BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780218|ref|YP_003064631.1| thymidylate kinase [Candidatus
Liberibacter asiaticus str. psy62]
         (225 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780218|ref|YP_003064631.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039895|gb|ACT56691.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 225

 Score =  465 bits (1196), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 225/225 (100%), Positives = 225/225 (100%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD
Sbjct: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL
Sbjct: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI
Sbjct: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI
Sbjct: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225


>gi|315122339|ref|YP_004062828.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495741|gb|ADR52340.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 227

 Score =  352 bits (902), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 163/224 (72%), Positives = 195/224 (87%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNSGLFISFEGIEG GKTTHIS L  FL++ NYDV +TREPGGTP AEAARHVLL+ GVD
Sbjct: 1   MNSGLFISFEGIEGVGKTTHISHLAGFLKKNNYDVQITREPGGTPVAEAARHVLLTGGVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           EFGA AE+I+F++ RLDHVENVIRPAL+EGKILLCDRFLDSSYAYQGE+D  +  FLDSL
Sbjct: 61  EFGAYAESILFSSIRLDHVENVIRPALIEGKILLCDRFLDSSYAYQGEKDDFKKTFLDSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q++S Q ++PDCTIILDLPVD+GL+R+++RYSL++++ LDYFERKD ++HEKRR+IFLDI
Sbjct: 121 QQVSTQGIVPDCTIILDLPVDVGLQRIRHRYSLKKNSSLDYFERKDWIVHEKRRRIFLDI 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           AR+QP+RC IVD+ H FQ VA +ILNIVWEL+QKR  P   K D
Sbjct: 181 ARDQPERCRIVDATHPFQDVAAHILNIVWELMQKRSFPRPPKGD 224


>gi|209549399|ref|YP_002281316.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535155|gb|ACI55090.1| dTMP kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 226

 Score =  234 bits (597), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 112/211 (53%), Positives = 150/211 (71%), Gaps = 3/211 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLF++FEG EGAGK+T I  L   L+   +DV VTREPGG+P AEA RHVLLS   + 
Sbjct: 4   GTGLFVTFEGGEGAGKSTQIRRLAEALKGDGHDVLVTREPGGSPGAEAVRHVLLSGAAEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   + Q  F+++LQ
Sbjct: 64  FGTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGVTGNLQPDFIETLQ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I++  VMPDCT+ILD+P  IGL+R Q R +   +   D FE++ +  HEKRR+ FLDIA
Sbjct: 124 RIAINGVMPDCTVILDIPAKIGLERAQKRAA---TDAPDRFEKERLETHEKRREAFLDIA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+RCH++++  S +++A  I+ IV +L+
Sbjct: 181 AREPERCHVINAMQSEEAIAAEIVAIVRQLM 211


>gi|241204716|ref|YP_002975812.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858606|gb|ACS56273.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 236

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/211 (52%), Positives = 151/211 (71%), Gaps = 3/211 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLF++FEG EGAGK+T I  L   L+ + +DV +TREPGG+P AEA RHVLLS   + 
Sbjct: 14  GTGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEA 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  GK++LCDRF+DSS  YQG   + +  F+++LQ
Sbjct: 74  FGTRMEAILFAAARNDHVEEVIRPALASGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQ 133

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I++  VMPDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA
Sbjct: 134 RIAINGVMPDCTVILDIPAKVGLERAQKRAA---ADAPDRFEKERLETHEKRREAFLDIA 190

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+RCH+V++  S +++A  IL IV +L+
Sbjct: 191 AREPERCHVVNAMQSEEAIAAEILAIVQQLL 221


>gi|116252223|ref|YP_768061.1| thymidylate kinase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256871|emb|CAK07965.1| putative thymidylate kinase (ec 2.7.4.9) (dtmp kinase) [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 226

 Score =  232 bits (591), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 109/211 (51%), Positives = 151/211 (71%), Gaps = 3/211 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLF++FEG EGAGK+T I  L   L+ + +DV +TREPGG+P AEA RHVLLS   + 
Sbjct: 4   GTGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  GK++LCDRF+DSS  YQG   + +  F+++LQ
Sbjct: 64  FGTRMEAILFAAARNDHVEEVIRPALAAGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I++  VMPDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA
Sbjct: 124 RIAINGVMPDCTVILDIPAKVGLERAQKRAA---ADAPDRFEKERLETHEKRREAFLDIA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+RCH+V++  + +++A  IL IV +L+
Sbjct: 181 AREPERCHVVNAMQTEEAIAAEILAIVKQLL 211


>gi|190891837|ref|YP_001978379.1| thymidylate kinase protein [Rhizobium etli CIAT 652]
 gi|190697116|gb|ACE91201.1| thymidylate kinase protein [Rhizobium etli CIAT 652]
          Length = 236

 Score =  229 bits (584), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 109/210 (51%), Positives = 150/210 (71%), Gaps = 3/210 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLF++FEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHVLLS   + 
Sbjct: 14  GTGLFVTFEGGEGAGKSTQIRRLAETLKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEA 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   + +  F+++LQ
Sbjct: 74  FGTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQ 133

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I++  V+PDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA
Sbjct: 134 RIAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIA 190

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +P+RCH+V++  + +++A  IL IV +L
Sbjct: 191 AREPERCHVVNAMQTEEAIAAEILAIVKQL 220


>gi|218682276|ref|ZP_03529877.1| thymidylate kinase [Rhizobium etli CIAT 894]
          Length = 226

 Score =  228 bits (582), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 110/211 (52%), Positives = 148/211 (70%), Gaps = 3/211 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLF++FEG EGAGK+T I  L   L+ +  DV +TREPGG+P AEA RHVLLS   + 
Sbjct: 4   GTGLFVTFEGGEGAGKSTQIRRLAAALKGEGQDVLMTREPGGSPGAEAVRHVLLSGAAEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   S    F+++LQ
Sbjct: 64  YGTRMEAILFAAARNDHVEEVIRPALTAGKIVLCDRFMDSSRVYQGITGSLDPDFIETLQ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++  V PDCT+ILD+P  IGL+R Q R +   +   D FE++ +  HEKRR+ FLDIA
Sbjct: 124 RVAINGVTPDCTVILDIPAKIGLERAQKRAA---ADAPDRFEKERLETHEKRREAFLDIA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+RCH+V++  S +++A  IL IV +L+
Sbjct: 181 AREPERCHVVNAMQSEEAIAAEILAIVKQLL 211


>gi|86357778|ref|YP_469670.1| thymidylate kinase protein [Rhizobium etli CFN 42]
 gi|86281880|gb|ABC90943.1| thymidylate kinase protein [Rhizobium etli CFN 42]
          Length = 236

 Score =  225 bits (574), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 108/210 (51%), Positives = 148/210 (70%), Gaps = 3/210 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLF++FEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHVLLS   + 
Sbjct: 14  GTGLFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEA 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   +    F+++LQ
Sbjct: 74  FGTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLDPDFIETLQ 133

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I++  V+PDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA
Sbjct: 134 RIAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIA 190

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +P+RC +V++  + +++A  IL IV +L
Sbjct: 191 AREPERCRVVNAMQTEEAIAAEILAIVKQL 220


>gi|222086013|ref|YP_002544545.1| thymidylate kinase [Agrobacterium radiobacter K84]
 gi|221723461|gb|ACM26617.1| thymidylate kinase [Agrobacterium radiobacter K84]
          Length = 227

 Score =  225 bits (573), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 112/215 (52%), Positives = 149/215 (69%), Gaps = 6/215 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF+SFEG EGAGK+T I  L  +L+   +DV VTREPGG+P AEA RHVLLS   + F
Sbjct: 5   TGLFVSFEGGEGAGKSTQIRRLAAWLRELGHDVLVTREPGGSPGAEAVRHVLLSGAAEMF 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE +IRPAL  G I+LCDRF+DSS  YQG   + +  F+++LQ 
Sbjct: 65  GTRMEAILFAAARNDHVEEIIRPALAHGTIVLCDRFMDSSRVYQGITGNLEPDFIEALQR 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V  V+PDCT+ILD+P ++GL+R + R S    A  D FE++++  HEKRR+ FLDIA 
Sbjct: 125 VAVNGVVPDCTLILDIPAELGLERARKRASA--DAAPDRFEKEELQTHEKRREAFLDIAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             PDRCH+VD+      +A  I  I    ++KR+S
Sbjct: 183 RDPDRCHVVDAQRGEDVIADEIAAI----IEKRLS 213


>gi|218463772|ref|ZP_03503863.1| thymidylate kinase [Rhizobium etli Kim 5]
          Length = 220

 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 147/207 (71%), Gaps = 3/207 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHVLLS   + FG 
Sbjct: 1   MFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAFGT 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   + +  F+++LQ I+
Sbjct: 61  RMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQRIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  V+PDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA  +
Sbjct: 121 INGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAARE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P+RC ++++  + +++A  IL IV +L
Sbjct: 178 PERCRVINAMQTEEAIAAEILAIVKQL 204


>gi|222148589|ref|YP_002549546.1| thymidylate kinase [Agrobacterium vitis S4]
 gi|221735575|gb|ACM36538.1| thymidylate kinase [Agrobacterium vitis S4]
          Length = 221

 Score =  220 bits (560), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/217 (49%), Positives = 142/217 (65%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           + SGLF++FEG EGAGK+T I LL   L+   + V  +REPGG+P AEA RHVLLS   +
Sbjct: 3   VGSGLFVTFEGGEGAGKSTQIRLLANALEALGFAVVTSREPGGSPCAEALRHVLLSGAAE 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG E EAI+FAAAR DHVE  +RPAL+ G ++LCDRF+DSS  YQG   +    F++ L
Sbjct: 63  PFGVEMEAILFAAARNDHVEARLRPALLRGDMVLCDRFMDSSRVYQGATGNLSSAFIERL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q I+V  V+PD TIILDLP +IGL R +NR         D FE++++ IHE+RR+ FL I
Sbjct: 123 QAIAVDGVVPDLTIILDLPANIGLARAKNRAGALGEDAPDRFEKEEIAIHERRREAFLAI 182

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           AR +P RC +VD+    + +A  I   V  L+   V 
Sbjct: 183 ARAEPARCRVVDARAGIEQIAEEIFAAVKPLLPHNVG 219


>gi|307312732|ref|ZP_07592363.1| thymidylate kinase [Sinorhizobium meliloti BL225C]
 gi|307317216|ref|ZP_07596657.1| thymidylate kinase [Sinorhizobium meliloti AK83]
 gi|306897304|gb|EFN28049.1| thymidylate kinase [Sinorhizobium meliloti AK83]
 gi|306899457|gb|EFN30089.1| thymidylate kinase [Sinorhizobium meliloti BL225C]
          Length = 234

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 3/224 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EGAGK+T + LL   L  + Y V  TREPGG+  AEA RHVLLS   +
Sbjct: 11  LAKGFFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG   EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS  YQG   + +  F+++L
Sbjct: 71  SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + ++V  V+PDCTII DLP  +GL+R + R +   +   D FE++ +  HEKRR+ FLDI
Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           A   P+RC +VD+     ++A  +L++V  L+     P  S  +
Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231


>gi|150396510|ref|YP_001326977.1| thymidylate kinase [Sinorhizobium medicae WSM419]
 gi|150028025|gb|ABR60142.1| dTMP kinase [Sinorhizobium medicae WSM419]
          Length = 234

 Score =  216 bits (549), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 106/212 (50%), Positives = 142/212 (66%), Gaps = 3/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  GLFI+FEG EGAGK+T + LL   L  + Y V  TREPGG+  AEA RHVLLS   +
Sbjct: 11  LAKGLFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSAGAEAVRHVLLSGAAE 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG   EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS  YQG   + +  F+++L
Sbjct: 71  SFGVRMEAILFAAARSDHVEEVIRPALEDGTIVLCDRFMDSSRVYQGVTGNLEPSFVETL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + ++V  V+PDCTII DLP  IGL+R + R +   +   D FE++ +  HEKRR+ FLDI
Sbjct: 131 ERVAVNGVIPDCTIIFDLPAAIGLERARRRAA---NNSPDRFEKEQLETHEKRREAFLDI 187

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A     RC +VD+     ++A ++LN+V  L+
Sbjct: 188 AATDSKRCRVVDANRPPAAIAADVLNLVKALL 219


>gi|15965357|ref|NP_385710.1| putative thymidylate kinase, dTMP kinase protein [Sinorhizobium
           meliloti 1021]
 gi|23821796|sp|Q92PW7|KTHY_RHIME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|15074537|emb|CAC46183.1| Putative thymidylate kinase, dTMP kinase [Sinorhizobium meliloti
           1021]
          Length = 234

 Score =  214 bits (545), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 105/224 (46%), Positives = 144/224 (64%), Gaps = 3/224 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T + LL   L  + Y V  TREPGG+  AEA RHVLLS   +
Sbjct: 11  LAKGFFITFEGGEGTGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG   EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS  YQG   + +  F+++L
Sbjct: 71  SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + ++V  V+PDCTII DLP  +GL+R + R +   +   D FE++ +  HEKRR+ FLDI
Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           A   P+RC +VD+     ++A  +L++V  L+     P  S  +
Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231


>gi|153009407|ref|YP_001370622.1| thymidylate kinase [Ochrobactrum anthropi ATCC 49188]
 gi|151561295|gb|ABS14793.1| dTMP kinase [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score =  214 bits (545), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 101/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL + L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 6   SGLFITFEGGEGAGKSTQIALLAKHLRANGFDPVITREPGGSPGAEAIRHVILSGNAENY 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA  EA++F AAR DHV  +IRPAL EG+++LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 66  GAAMEALLFGAARADHVNQLIRPALNEGRVVLCDRFIDSSRAYQGVTGNLDRTYMAAVER 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  VMPD TIILD+P + GL R   R   R S   D FE++D+ +HE RRQ FL IA 
Sbjct: 126 IAIDGVMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P+RC ++D+      +A+++   V   +++R
Sbjct: 183 AEPERCKVIDADRLQDQIASDVAKEVDSALKER 215


>gi|227822155|ref|YP_002826126.1| thymidylate kinase [Sinorhizobium fredii NGR234]
 gi|227341155|gb|ACP25373.1| thymidylate kinase [Sinorhizobium fredii NGR234]
          Length = 234

 Score =  213 bits (543), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/221 (49%), Positives = 147/221 (66%), Gaps = 3/221 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++FEG EGAGK+T + LL   L  + YDV  TREPGG+  AEA RHVLLS   + 
Sbjct: 12  TKGLFVTFEGGEGAGKSTQMRLLADSLSGRGYDVLTTREPGGSLGAEAVRHVLLSGAAES 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL +G+I+LCDRF+DSS  YQG   + +  F+++L+
Sbjct: 72  FGVRMEAILFAAARSDHVEEVIRPALQQGRIVLCDRFMDSSRVYQGVTGNLEPGFVETLE 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++V  V+PD TII DLP + GL+R + R SL  +   D FE++ +  HEKRR+ FLDIA
Sbjct: 132 RVAVNGVVPDRTIIFDLPAEAGLERARRR-SL--NVDPDRFEKEQLETHEKRREAFLDIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
              P+RC +VD+    + +A  +L +V  L+     P SS+
Sbjct: 189 EADPERCRVVDATLPPEVIAAEVLRLVEALLPGDGEPQSSR 229


>gi|325292851|ref|YP_004278715.1| Thymidylate kinase [Agrobacterium sp. H13-3]
 gi|325060704|gb|ADY64395.1| Thymidylate kinase [Agrobacterium sp. H13-3]
          Length = 224

 Score =  212 bits (539), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 104/213 (48%), Positives = 143/213 (67%), Gaps = 2/213 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFISFEG EGAGK+T I  L   L+ + +DV VTREPGG+P AEA RHVLLS   + 
Sbjct: 4   KTGLFISFEGGEGAGKSTQIRTLAEALRDRGFDVIVTREPGGSPGAEAVRHVLLSGAAES 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  G I+LCDRFLDSS  YQG   + +  F+++LQ
Sbjct: 64  FGVRMEAILFAAARNDHVEEVIRPALERGAIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++  V+P+ T+I D+  + GL R + R    E A  D FE++++  HEKRR+ +LDIA
Sbjct: 124 RVAIDGVVPELTLIFDIAAEKGLARARKRAD--EGAAPDRFEKEEIETHEKRREAYLDIA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +P RC IV++      V  ++++ V  L+++
Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214


>gi|239831999|ref|ZP_04680328.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301]
 gi|239824266|gb|EEQ95834.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301]
          Length = 218

 Score =  211 bits (538), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL + L+   +D  +TREPGG+P AEA RHV+LS   +++
Sbjct: 6   SGLFITFEGGEGAGKSTQIALLAKHLRASGFDPVITREPGGSPGAEAIRHVILSGNAEKY 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+++LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 66  GPAMEALLFAAARADHVDQLIRPALDEGRVVLCDRFIDSSRAYQGVTGNLDSTYMSAVER 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  +MPD TIILD+P + GL R   R   R S   D FE++D+ +HE RRQ FL IA 
Sbjct: 126 IAIDGIMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++ +     ++A+ I   +  ++++R
Sbjct: 183 AEPRRCKVIGADRPQDAIASEIAREIDSVLKER 215


>gi|23821779|sp|Q8UFA0|KTHY_AGRT5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 224

 Score =  211 bits (536), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 103/213 (48%), Positives = 144/213 (67%), Gaps = 2/213 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFISFEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHV+LS   + 
Sbjct: 4   KTGLFISFEGGEGAGKSTQIRTLAEALRGRGFEVVVTREPGGSPGAEAVRHVILSGAAES 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  G+I+LCDRFLDSS  YQG   + +  F+++LQ
Sbjct: 64  FGVRMEAILFAAARNDHVEEVIRPALARGEIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I++  V+P+ T+I D+  + GL R + R    E A  D FE++++  HEKRR+ +LDIA
Sbjct: 124 RIAIDGVVPELTLIFDIAAEKGLARARKRAD--EGATPDRFEKEEIETHEKRREAYLDIA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +P RC IV++      V  ++++ V  L+++
Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214


>gi|261754954|ref|ZP_05998663.1| thymidylate kinase [Brucella suis bv. 3 str. 686]
 gi|306843867|ref|ZP_07476462.1| thymidylate kinase [Brucella sp. BO1]
 gi|38258158|sp|Q8G0U3|KTHY_BRUSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|261744707|gb|EEY32633.1| thymidylate kinase [Brucella suis bv. 3 str. 686]
 gi|306275622|gb|EFM57346.1| thymidylate kinase [Brucella sp. BO1]
          Length = 214

 Score =  211 bits (536), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|265984061|ref|ZP_06096796.1| thymidylate kinase [Brucella sp. 83/13]
 gi|306838352|ref|ZP_07471197.1| thymidylate kinase [Brucella sp. NF 2653]
 gi|264662653|gb|EEZ32914.1| thymidylate kinase [Brucella sp. 83/13]
 gi|306406492|gb|EFM62726.1| thymidylate kinase [Brucella sp. NF 2653]
          Length = 214

 Score =  211 bits (536), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILAEK 211


>gi|163760148|ref|ZP_02167231.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43]
 gi|162282547|gb|EDQ32835.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43]
          Length = 226

 Score =  210 bits (535), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 101/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+FEG EG GK+T I+ L + L+R+  DV VTREPGG+  AEA RHVLLS   +E
Sbjct: 4   SKGRFITFEGGEGVGKSTQINRLAKVLRRRGMDVLVTREPGGSLGAEAVRHVLLSGAAEE 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EA++FAAAR DHVE VIRPAL EG I+LCDR++DSS  YQG   + +  F+ +L+
Sbjct: 64  FGIRMEAMLFAAARSDHVEEVIRPALAEGAIVLCDRYMDSSRVYQGVTGNLEPQFIVNLE 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+V  ++PD T+ILDLP + GL+R + R     +   D FE+++V  HEKRR+ F+D+ 
Sbjct: 124 RIAVNSMVPDLTLILDLPAEAGLRRAKARVGA--NVAPDRFEKEEVATHEKRREAFIDLT 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           R++P+RC ++++      VA  +L+ V  +++
Sbjct: 182 RSEPERCKLINADQPEDMVALAVLSTVEPVLE 213


>gi|163843261|ref|YP_001627665.1| thymidylate kinase [Brucella suis ATCC 23445]
 gi|189028829|sp|B0CGE4|KTHY_BRUSI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|163673984|gb|ABY38095.1| thymidylate kinase [Brucella suis ATCC 23445]
          Length = 214

 Score =  210 bits (535), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKLIDADRSQEKIADEIRSVVDTILTEK 211


>gi|110633933|ref|YP_674141.1| thymidylate kinase [Mesorhizobium sp. BNC1]
 gi|123162339|sp|Q11HZ9|KTHY_MESSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110284917|gb|ABG62976.1| thymidylate kinase [Chelativorans sp. BNC1]
          Length = 225

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 105/214 (49%), Positives = 142/214 (66%), Gaps = 3/214 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I LL   L+R+  DV  TREPGG+P AEA RHVLLS   + FG
Sbjct: 5   GFFITFEGGEGAGKSTQIHLLADRLRREGRDVLTTREPGGSPGAEAIRHVLLSGAAEPFG 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EAI+FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+ +L+ +
Sbjct: 65  ATLEAILFAAARSDHVEQVIRPAVESGAIVLCDRFLDSSRVYQGVTGGLASDFMAALERV 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V  ++PD T+ILD+  + GL+R   R   R  A  D FE++++ IH +RR+ FL+IA  
Sbjct: 125 TVNGLIPDLTVILDIDPEEGLRRASER---RGKATADRFEKENLEIHRRRREAFLNIAAR 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +P RC ++D++ S  +V+ N+  IV  ++  R  
Sbjct: 182 EPQRCVVIDASRSADAVSENVTEIVLRVIFDRAG 215


>gi|319408563|emb|CBI82216.1| Thymidylate kinase [Bartonella schoenbuchensis R1]
          Length = 214

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 102/210 (48%), Positives = 142/210 (67%), Gaps = 2/210 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT ISLL ++L+ KNYDV +TREPGGT  AEA R+VLLS   +++
Sbjct: 2   SGYFITFEGGEGAGKTTQISLLAQYLRSKNYDVVITREPGGTAGAEAMRYVLLSGNTEQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA  EA++F AAR+DHV  VI P+L  GKI+LCDRF+DS   YQG  +      L  L  
Sbjct: 62  GAFIEAVLFTAARVDHVSEVILPSLQAGKIILCDRFIDSMRVYQGLNNKVNSHLLSVLGR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I +  VMP+ T +LD+P   G++R   R   +E   +DYFE+  + I E+RRQ FL +AR
Sbjct: 122 IGLGTVMPNLTFLLDIPATFGMERTDLRR--KEIGKIDYFEKDQLNIQEQRRQAFLQLAR 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           N+P R  ++D+  + +++A+ I +I  +L+
Sbjct: 180 NEPFRFRVIDATCAVETIASQIKDICHQLI 209


>gi|161618946|ref|YP_001592833.1| thymidylate kinase [Brucella canis ATCC 23365]
 gi|260566467|ref|ZP_05836937.1| thymidylate kinase [Brucella suis bv. 4 str. 40]
 gi|189028828|sp|A9MB09|KTHY_BRUC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|161335757|gb|ABX62062.1| thymidylate kinase [Brucella canis ATCC 23365]
 gi|260155985|gb|EEW91065.1| thymidylate kinase [Brucella suis bv. 4 str. 40]
          Length = 214

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DS  AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSGRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|17987272|ref|NP_539906.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|148558979|ref|YP_001258934.1| thymidylate kinase [Brucella ovis ATCC 25840]
 gi|189024159|ref|YP_001934927.1| Thymidylate kinase [Brucella abortus S19]
 gi|225627470|ref|ZP_03785507.1| thymidylate kinase [Brucella ceti str. Cudo]
 gi|225852497|ref|YP_002732730.1| thymidylate kinase [Brucella melitensis ATCC 23457]
 gi|237815418|ref|ZP_04594416.1| thymidylate kinase [Brucella abortus str. 2308 A]
 gi|260545335|ref|ZP_05821076.1| thymidylate kinase [Brucella abortus NCTC 8038]
 gi|260563999|ref|ZP_05834485.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260754728|ref|ZP_05867076.1| dTMP kinase [Brucella abortus bv. 6 str. 870]
 gi|260757951|ref|ZP_05870299.1| dTMP kinase [Brucella abortus bv. 4 str. 292]
 gi|260883749|ref|ZP_05895363.1| thymidylate kinase [Brucella abortus bv. 9 str. C68]
 gi|261213980|ref|ZP_05928261.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya]
 gi|261222160|ref|ZP_05936441.1| thymidylate kinase [Brucella ceti B1/94]
 gi|261314279|ref|ZP_05953476.1| thymidylate kinase [Brucella pinnipedialis M163/99/10]
 gi|261325087|ref|ZP_05964284.1| thymidylate kinase [Brucella neotomae 5K33]
 gi|261752297|ref|ZP_05996006.1| thymidylate kinase [Brucella suis bv. 5 str. 513]
 gi|261758182|ref|ZP_06001891.1| thymidylate kinase [Brucella sp. F5/99]
 gi|265988662|ref|ZP_06101219.1| thymidylate kinase [Brucella pinnipedialis M292/94/1]
 gi|265991077|ref|ZP_06103634.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994912|ref|ZP_06107469.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|265998125|ref|ZP_06110682.1| thymidylate kinase [Brucella ceti M490/95/1]
 gi|265999472|ref|ZP_05466544.2| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|294852415|ref|ZP_06793088.1| thymidylate kinase [Brucella sp. NVSL 07-0026]
 gi|297248318|ref|ZP_06932036.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196]
 gi|23821787|sp|Q8YH15|KTHY_BRUME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221724|sp|A5VQD7|KTHY_BRUO2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238689366|sp|B2S5K6|KTHY_BRUA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808281|sp|C0RIW8|KTHY_BRUMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|17982949|gb|AAL52170.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|148370236|gb|ABQ60215.1| thymidylate kinase [Brucella ovis ATCC 25840]
 gi|189019731|gb|ACD72453.1| Thymidylate kinase [Brucella abortus S19]
 gi|225617475|gb|EEH14520.1| thymidylate kinase [Brucella ceti str. Cudo]
 gi|225640862|gb|ACO00776.1| thymidylate kinase [Brucella melitensis ATCC 23457]
 gi|237790255|gb|EEP64465.1| thymidylate kinase [Brucella abortus str. 2308 A]
 gi|260096742|gb|EEW80617.1| thymidylate kinase [Brucella abortus NCTC 8038]
 gi|260154015|gb|EEW89107.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260668269|gb|EEX55209.1| dTMP kinase [Brucella abortus bv. 4 str. 292]
 gi|260674836|gb|EEX61657.1| dTMP kinase [Brucella abortus bv. 6 str. 870]
 gi|260873277|gb|EEX80346.1| thymidylate kinase [Brucella abortus bv. 9 str. C68]
 gi|260915587|gb|EEX82448.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya]
 gi|260920744|gb|EEX87397.1| thymidylate kinase [Brucella ceti B1/94]
 gi|261301067|gb|EEY04564.1| thymidylate kinase [Brucella neotomae 5K33]
 gi|261303305|gb|EEY06802.1| thymidylate kinase [Brucella pinnipedialis M163/99/10]
 gi|261738166|gb|EEY26162.1| thymidylate kinase [Brucella sp. F5/99]
 gi|261742050|gb|EEY29976.1| thymidylate kinase [Brucella suis bv. 5 str. 513]
 gi|262552593|gb|EEZ08583.1| thymidylate kinase [Brucella ceti M490/95/1]
 gi|262766025|gb|EEZ11814.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|263001861|gb|EEZ14436.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094155|gb|EEZ18077.1| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660859|gb|EEZ31120.1| thymidylate kinase [Brucella pinnipedialis M292/94/1]
 gi|294821004|gb|EFG38003.1| thymidylate kinase [Brucella sp. NVSL 07-0026]
 gi|297175487|gb|EFH34834.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196]
 gi|326409013|gb|ADZ66078.1| Thymidylate kinase [Brucella melitensis M28]
 gi|326538723|gb|ADZ86938.1| thymidylate kinase [Brucella melitensis M5-90]
          Length = 214

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|261317627|ref|ZP_05956824.1| thymidylate kinase [Brucella pinnipedialis B2/94]
 gi|261296850|gb|EEY00347.1| thymidylate kinase [Brucella pinnipedialis B2/94]
          Length = 214

 Score =  208 bits (530), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+    GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|261218666|ref|ZP_05932947.1| thymidylate kinase [Brucella ceti M13/05/1]
 gi|261321836|ref|ZP_05961033.1| thymidylate kinase [Brucella ceti M644/93/1]
 gi|260923755|gb|EEX90323.1| thymidylate kinase [Brucella ceti M13/05/1]
 gi|261294526|gb|EEX98022.1| thymidylate kinase [Brucella ceti M644/93/1]
          Length = 214

 Score =  207 bits (528), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +   I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKITDEIRSVVDTILTEK 211


>gi|260761774|ref|ZP_05874117.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260672206|gb|EEX59027.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 214

 Score =  207 bits (528), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AE  RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|23501873|ref|NP_698000.1| thymidylate kinase [Brucella suis 1330]
 gi|254704286|ref|ZP_05166114.1| thymidylate kinase [Brucella suis bv. 3 str. 686]
 gi|23347812|gb|AAN29915.1| thymidylate kinase [Brucella suis 1330]
          Length = 211

 Score =  206 bits (524), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|254719070|ref|ZP_05180881.1| thymidylate kinase [Brucella sp. 83/13]
 gi|306840480|ref|ZP_07473239.1| thymidylate kinase [Brucella sp. BO2]
 gi|306289495|gb|EFM60713.1| thymidylate kinase [Brucella sp. BO2]
          Length = 211

 Score =  206 bits (524), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILAEK 208


>gi|62289916|ref|YP_221709.1| thymidylate kinase [Brucella abortus bv. 1 str. 9-941]
 gi|82699843|ref|YP_414417.1| thymidylate kinase [Brucella melitensis biovar Abortus 2308]
 gi|254689223|ref|ZP_05152477.1| thymidylate kinase [Brucella abortus bv. 6 str. 870]
 gi|254693708|ref|ZP_05155536.1| thymidylate kinase [Brucella abortus bv. 3 str. Tulya]
 gi|254701744|ref|ZP_05163572.1| thymidylate kinase [Brucella suis bv. 5 str. 513]
 gi|254706812|ref|ZP_05168640.1| thymidylate kinase [Brucella pinnipedialis M163/99/10]
 gi|254730256|ref|ZP_05188834.1| thymidylate kinase [Brucella abortus bv. 4 str. 292]
 gi|256031574|ref|ZP_05445188.1| thymidylate kinase [Brucella pinnipedialis M292/94/1]
 gi|256044653|ref|ZP_05447557.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061085|ref|ZP_05451240.1| thymidylate kinase [Brucella neotomae 5K33]
 gi|256113539|ref|ZP_05454365.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|256159712|ref|ZP_05457459.1| thymidylate kinase [Brucella ceti M490/95/1]
 gi|256254974|ref|ZP_05460510.1| thymidylate kinase [Brucella ceti B1/94]
 gi|256257473|ref|ZP_05463009.1| thymidylate kinase [Brucella abortus bv. 9 str. C68]
 gi|256369414|ref|YP_003106922.1| thymidylate kinase [Brucella microti CCM 4915]
 gi|260168705|ref|ZP_05755516.1| thymidylate kinase [Brucella sp. F5/99]
 gi|62196048|gb|AAX74348.1| Tmk, thymidylate kinase [Brucella abortus bv. 1 str. 9-941]
 gi|82615944|emb|CAJ10967.1| Thymidylate kinase:ATP/GTP-binding site motif A (P-loop) [Brucella
           melitensis biovar Abortus 2308]
 gi|255999574|gb|ACU47973.1| thymidylate kinase [Brucella microti CCM 4915]
          Length = 211

 Score =  204 bits (520), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|254710078|ref|ZP_05171889.1| thymidylate kinase [Brucella pinnipedialis B2/94]
          Length = 211

 Score =  203 bits (517), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+    GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|254714079|ref|ZP_05175890.1| thymidylate kinase [Brucella ceti M644/93/1]
 gi|254716864|ref|ZP_05178675.1| thymidylate kinase [Brucella ceti M13/05/1]
          Length = 211

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +   I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKITDEIRSVVDTILTEK 208


>gi|254697358|ref|ZP_05159186.1| thymidylate kinase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 211

 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AE  RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|319783485|ref|YP_004142961.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169373|gb|ADV12911.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 231

 Score =  202 bits (514), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 2/200 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EGAGK+T I  L R ++ K YDV +TREPGG+P AEA RHVLLS   +
Sbjct: 8   LARGFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 67

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG + EA++FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+D+L
Sbjct: 68  PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMDAL 127

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++++  +MPD T+I D+    GL+R   R      A  D FE++ + IH+ RR+ FL I
Sbjct: 128 EQVAINGMMPDMTLIFDIDPAEGLRRATLRRGA--EAVADRFEKETLAIHQARREAFLAI 185

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
           A+ +P+RC +VD+A    +V
Sbjct: 186 AKAEPERCIVVDAAAEPDAV 205


>gi|163868322|ref|YP_001609531.1| thymidylate kinase [Bartonella tribocorum CIP 105476]
 gi|161017978|emb|CAK01536.1| Thymidylate kinase [Bartonella tribocorum CIP 105476]
          Length = 214

 Score =  196 bits (499), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 2/215 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG +G GKT  ISLL  +L  + YDV  TREPGGT  AEA RH+LLS  V ++
Sbjct: 2   SGYFITFEGGDGVGKTVQISLLAEYLSHQGYDVVTTREPGGTAGAEAIRHILLSGKVQQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++F AAR DHV  +I P+L +GKI+LCDRF+DS+  YQG  +      L  L+ 
Sbjct: 62  GPLIEAVLFTAARTDHVAEIIAPSLQKGKIVLCDRFIDSTRVYQGLNERVNSSLLSVLEC 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  +MP  T +LD+P   G+KR   R    E   +DYFE+K + I E+RRQ FL +A+
Sbjct: 122 IALNGIMPHLTFLLDMPAACGIKRANLRRKKTEE--IDYFEKKPLEIQEQRRQAFLQLAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +P R  ++D+  S + +A  I NI  +++  ++S
Sbjct: 180 QEPHRFRVIDATGSVEVIAHQIKNICHQVLLDKLS 214


>gi|121602268|ref|YP_989111.1| thymidylate kinase [Bartonella bacilliformis KC583]
 gi|120614445|gb|ABM45046.1| thymidylate kinase [Bartonella bacilliformis KC583]
          Length = 213

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG GKTT ISLL  + + K Y+V +TREPGGT  AE  R++LLS    ++G
Sbjct: 2   GYFITFEGGEGVGKTTQISLLAHYFRSKGYEVVITREPGGTAGAEIIRYILLSGSAIQYG 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  EA++F AAR DHV  VI+PAL  GKI+LCDRF+DS+  YQG  +      L  L+ I
Sbjct: 62  SFIEAVLFTAARADHVAEVIKPALQAGKIVLCDRFIDSTRVYQGLNNKVDSYLLSILECI 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  VMP+ T +LD+P    ++RV+ R   +ES  +D+FE+ ++ I E+RRQ FL +A+N
Sbjct: 122 GINGVMPNLTFLLDVPAISSMERVKLRR--KESGIIDHFEKDELKIQEQRRQAFLQLAKN 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P+R  ++D+  + + +A  I +I  +++
Sbjct: 180 EPNRIQVIDATGTVEEIACQIKDICHQVI 208


>gi|319407218|emb|CBI80857.1| Thymidylate kinase [Bartonella sp. 1-1C]
          Length = 213

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/210 (45%), Positives = 137/210 (65%), Gaps = 2/210 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT  AEA R++LLS  V ++
Sbjct: 2   SGYFITFEGGEGVGKTTQISLLSQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E  +F AAR DHV  +I P+L  GKI+LCDRF+DS+  YQG  +         L+ 
Sbjct: 62  GPFIETFLFTAARADHVSEIIIPSLQAGKIVLCDRFIDSTRVYQGINNKVDAHIFSILEH 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I ++ + PD T +LD+P  +G++RV  R    E   +DYFE+ D+ I E+RRQ FL++A+
Sbjct: 122 IGMKGIKPDLTFLLDIPTKLGIERVNLRRKRIEK--IDYFEKDDLAIQEQRRQAFLELAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++P R  ++D   + + +A  I +I  +L+
Sbjct: 180 HEPHRFQVIDGTCAVEVIADQIKDICHQLL 209


>gi|240850633|ref|YP_002972033.1| thymidylate kinase [Bartonella grahamii as4aup]
 gi|240267756|gb|ACS51344.1| thymidylate kinase [Bartonella grahamii as4aup]
          Length = 214

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 2/215 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG +G GKT  ISLL   L  + YDV  TREPGGT  AEA RH+LLS    ++
Sbjct: 2   SGYFITFEGGDGVGKTVQISLLAESLSHQGYDVVTTREPGGTLGAEAIRHILLSGQAQQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++F AAR+DHV  VI P+L +GKI+LCDRF+DS+  YQG  D+     L  L+ 
Sbjct: 62  GPLIEAVLFTAARVDHVTEVIAPSLQKGKIVLCDRFIDSTRVYQGLNDTVSSSLLAVLEC 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  ++P  T +LD+P   G+KR   R   +E+  +DYFE+  + + E+RRQ FL +A+
Sbjct: 122 IALNGILPHLTFLLDMPAMCGMKRANLRR--KETEEIDYFEKDQLEVQEQRRQAFLQLAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +P R  ++D+  S ++VA  I NI  +++  ++S
Sbjct: 180 QEPHRFRVIDATGSVEAVAHQIKNICHQVLLDKLS 214


>gi|319405648|emb|CBI79271.1| Thymidylate kinase [Bartonella sp. AR 15-3]
          Length = 210

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/205 (46%), Positives = 133/205 (64%), Gaps = 5/205 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT ISLL + L RK YDV +TREPGGT  AEA R++LLS  V E+
Sbjct: 2   SGYFITFEGGEGAGKTTQISLLAQHLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAEY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E  +F AAR DHV  +I+P+L  GKI+LCDRF+DS+  YQG  +         L+ 
Sbjct: 62  GPFIETFLFTAARADHVSEIIKPSLQAGKIVLCDRFIDSTRVYQGLDNKVDAHIFSILEH 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I ++ + PD T +LD+P  +G++RV  R        +DYFE+  + + E+RRQ FL++A+
Sbjct: 122 IGMKGIKPDLTFLLDIPAKLGMERVNLR-----RKKIDYFEKASLALQEQRRQAFLELAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNI 207
           ++P R  ++D   S + +A  I +I
Sbjct: 177 HEPHRFQVIDGTCSVEVIADQIKDI 201


>gi|49474220|ref|YP_032262.1| thymidylate kinase [Bartonella quintana str. Toulouse]
 gi|59798258|sp|Q6FZU8|KTHY_BARQU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49239724|emb|CAF26103.1| Thymidylate kinase [Bartonella quintana str. Toulouse]
          Length = 214

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/214 (42%), Positives = 139/214 (64%), Gaps = 2/214 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG GKTT ISLL ++L+ + YDV  TREPGGT  AEA RH+LLS     +
Sbjct: 2   SGYFITFEGGEGVGKTTQISLLAQYLRNQGYDVLTTREPGGTVGAEAIRHILLSGQAQNY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E I+  AAR+DH+  VI P+L +GKI+LCDRF+DS+  YQG  ++     L  L+ 
Sbjct: 62  GPLIEVILLTAARIDHITEVIAPSLQKGKIVLCDRFIDSTRVYQGLNNTVGSSVLSVLEY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++  +MP  T +LD+P   G++R   R   +++  +DYFE+ ++ I E+RRQ FL +A+
Sbjct: 122 VALNGIMPCLTFLLDIPARCGMERANLRR--KKAETIDYFEKDELKIQEQRRQAFLQLAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +P R  ++D+  + + +A  I NI  +++  +V
Sbjct: 180 QEPHRFRVIDATGAMEVIAQQIKNICHQVILDQV 213


>gi|319404208|emb|CBI77801.1| Thymidylate kinase [Bartonella rochalimae ATCC BAA-1498]
          Length = 217

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 8/215 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT  AEA R++LLS  V ++
Sbjct: 2   SGYFITFEGGEGVGKTTQISLLAQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-----SQHLFL 117
           G   E  +F AAR DHV  +I P+L  GKI+LCDRF+DS+  YQG           H+F 
Sbjct: 62  GPFIETFLFTAARADHVSEIIMPSLQAGKIVLCDRFIDSTRVYQGINKGINNRVDAHIF- 120

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L+ I ++ + PD T +LD+P  +G++RV  R    E   +DYFE+ D+ I E+RRQ F
Sbjct: 121 SILEHIGMKGIKPDLTFLLDIPAKLGIERVNLRRKKIEK--IDYFEKDDLAIQEQRRQAF 178

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L++A+++P R  ++D   + + +A  I +I  +L+
Sbjct: 179 LELAKHEPYRFQVIDGTCAVEVIADQIKDICHQLL 213


>gi|146340769|ref|YP_001205817.1| thymidylate kinase [Bradyrhizobium sp. ORS278]
 gi|166221723|sp|A4YUL6|KTHY_BRASO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146193575|emb|CAL77592.1| thymidylate kinase [Bradyrhizobium sp. ORS278]
          Length = 226

 Score =  191 bits (486), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 139/213 (65%), Gaps = 7/213 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F++FEG EGAGK+T I +L   L++    V +TREPGG+P AE  RH++LS      G
Sbjct: 13  GRFVTFEGGEGAGKSTQIKMLADRLEKDGVRVVLTREPGGSPGAEIMRHLVLSGMGKLLG 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AEAE ++FAAAR DHV NVI PAL +G  +LCDRF DS+ AYQG +       L+++Q +
Sbjct: 73  AEAETLLFAAARDDHVRNVILPALNQGSWVLCDRFFDSTRAYQGSQGKVAPDVLNAMQRV 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ ++ PD T+ILD+PV++GL+R   R   R S   D FE +D+  H+  R  F  IA  
Sbjct: 133 TIGDLKPDLTLILDVPVEVGLQRASAR---RGSGAPDRFESEDIKFHKGLRDAFHKIAAT 189

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +P RC ++D+  S ++V+    NIVW+ V++R+
Sbjct: 190 EPRRCVLIDATASAEAVS----NIVWDAVRERL 218


>gi|307942275|ref|ZP_07657626.1| thymidylate kinase [Roseibium sp. TrichSKD4]
 gi|307774561|gb|EFO33771.1| thymidylate kinase [Roseibium sp. TrichSKD4]
          Length = 229

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 128/206 (62%), Gaps = 1/206 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG EGAGKTT I+ LK+ L+     + +TREPGG+P AE  R +LLS    + 
Sbjct: 2   TGQFITFEGGEGAGKTTQIARLKQRLEELGKTICLTREPGGSPGAEKIREMLLSGAARKL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ VI PAL+ G  ++CDRF DS+  YQGE        LD L+ 
Sbjct: 62  GPRGEAMLFAAARADHVDGVIAPALVRGDWVICDRFADSTRVYQGEAGVDNET-LDLLET 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+V    PD TI++D+P DIGL RV +R    +S   D FE   +  HE+RR +FLD+A+
Sbjct: 121 IAVAGTRPDLTILIDIPADIGLSRVSSRSKTDDSGGPDRFEADTIATHERRRSLFLDLAK 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            QP+R  +VD  H    VA  I   V
Sbjct: 181 QQPERFVVVDGRHDPDHVAGEIWWAV 206


>gi|319898926|ref|YP_004159019.1| Thymidylate kinase [Bartonella clarridgeiae 73]
 gi|319402890|emb|CBI76441.1| Thymidylate kinase [Bartonella clarridgeiae 73]
          Length = 210

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/210 (44%), Positives = 138/210 (65%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT ISLL + L  K YDV +TREPGGT  AEA R++LLS  V ++
Sbjct: 2   SGYFITFEGGEGAGKTTQISLLAQHLGSKGYDVIITREPGGTVGAEAIRYILLSGSVAQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E ++F AAR DHV  +I+P+L  GKI+LCDRF+DS+  YQG  +      L  L+ 
Sbjct: 62  GPFIETVLFTAARADHVAEIIKPSLQAGKIVLCDRFIDSTRVYQGINNKVDTHILSILEY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I ++ + PD T +LD+P   G++R+    +LR    ++YFE+ D+ I E+RRQ FL++A+
Sbjct: 122 IGMKGIKPDLTFLLDIPAKFGIERI----NLRRKK-INYFEKDDLDIQEQRRQAFLELAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++P R  ++D   + + +A  I +I   ++
Sbjct: 177 HEPHRFQVIDGTCAVEVIADQIKDICHRVI 206


>gi|114704619|ref|ZP_01437527.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506]
 gi|114539404|gb|EAU42524.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506]
          Length = 226

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 93/203 (45%), Positives = 132/203 (65%), Gaps = 3/203 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG +G+GKTT +  L + L+   +DV  TREPGGTP A+A RHV+LS    +F
Sbjct: 2   AGKFITFEGGDGSGKTTQVLRLAKMLREYGFDVVTTREPGGTPGADAIRHVVLSGAARDF 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DH++ VIRPAL EG I++CDRF DS+  YQ         FLD L+ 
Sbjct: 62  GPNIEAVLFAAARADHLDKVIRPALEEGAIVICDRFHDSTRVYQAATKDLDLAFLDRLET 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  V PD TIILD+P ++G +R + R S  E+   D FE   + +H +RR+ FL IA 
Sbjct: 122 ATLDGVAPDLTIILDVPAELGYERAKARRSEAEA---DRFESDALDVHAERRERFLAIAE 178

Query: 183 NQPDRCHIVDSAHSFQSVATNIL 205
           ++PDRC ++D     + +A +I+
Sbjct: 179 DEPDRCVVIDGRGEEEEIAEDIV 201


>gi|118589860|ref|ZP_01547264.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614]
 gi|118437357|gb|EAV43994.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614]
          Length = 241

 Score =  188 bits (477), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 135/215 (62%), Gaps = 5/215 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGK+T I+ LK +L+     V VTREPGG+P AE  R +LLS G  + 
Sbjct: 15  SGHFITFEGGEGAGKSTQIARLKTYLEGMGQSVVVTREPGGSPGAEKIRTMLLSGGAKDL 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+  I+PAL  G  +LCDR+ DS++ YQGE    +  +L  L+ 
Sbjct: 75  GPRGEAMLFAAARADHVDTTIKPALERGDWVLCDRYADSTWVYQGEAGVDRE-YLKLLET 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +V  V PD TI++D+PV+IGL RV  R     S   D FE +D+ +H++RR++FL++A+
Sbjct: 134 AAVAGVYPDLTILIDVPVEIGLGRVAERSRTDNSGGPDRFEDEDLKVHQRRRELFLELAK 193

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +  R  ++D +     VA  I     E VQK  S
Sbjct: 194 IESFRFAVIDGSKGLDEVAAAIR----EAVQKTFS 224


>gi|158423797|ref|YP_001525089.1| thymidylate kinase [Azorhizobium caulinodans ORS 571]
 gi|158330686|dbj|BAF88171.1| thymidylate kinase [Azorhizobium caulinodans ORS 571]
          Length = 235

 Score =  186 bits (472), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/223 (43%), Positives = 136/223 (60%), Gaps = 13/223 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GK+T    L   LQ+   +V +TREPGG+  AEA RHVLLS    +FG
Sbjct: 6   GRFITLEGGEGTGKSTQARRLAAALQKGGLEVVLTREPGGSAGAEAVRHVLLSGAAKDFG 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + EA++FAAAR DHV+++IRPAL  GK ++CDRF+DS+  YQG   +     LDSL+ +
Sbjct: 66  PQGEALLFAAARADHVDSLIRPALAAGKWVICDRFIDSTRVYQGAVGAVPGALLDSLEWV 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  E  PD T++LD+P ++GL R   R    E A  D FE + +  H + R  FL +A+ 
Sbjct: 126 AAAEARPDLTLVLDVPPEVGLSRAAGRG---EGA--DRFESEGLAFHTRVRDAFLALAKA 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV----SPLSSK 222
            P RC IVD++     VA     +VW  V++R+     PLS+K
Sbjct: 181 DPARCVIVDASGGPDDVAA----LVWSSVRERLVPPERPLSAK 219


>gi|13470654|ref|NP_102223.1| thymidylate kinase [Mesorhizobium loti MAFF303099]
 gi|23821805|sp|Q98MV4|KTHY_RHILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|14021396|dbj|BAB48009.1| thymidylate kinase [Mesorhizobium loti MAFF303099]
          Length = 224

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/216 (46%), Positives = 136/216 (62%), Gaps = 2/216 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T I  L R +  K YDV +TREPGG+P AEA RHVLLS   +
Sbjct: 1   MARGFFITFEGGEGAGKSTQIERLARKMHAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG + EA++FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+ +L
Sbjct: 61  PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++I++  +MPD T+I D+    GL+R   R      A  D FE++ + IH+ RR  FL I
Sbjct: 121 EQIAINGMMPDMTLIFDIDPAEGLRRATLRRG--SDAGADRFEKETLAIHQARRAAFLAI 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           A  +P+RC +VD++    +V   +   V+  ++ R 
Sbjct: 179 AAAEPERCIVVDASADPNTVEDVVTAAVFAALEARA 214


>gi|260459470|ref|ZP_05807725.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075]
 gi|259035024|gb|EEW36280.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075]
          Length = 248

 Score =  183 bits (465), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I  L R ++ K YDV +TREPGG+P AEA RHVLLS   + FG
Sbjct: 28  GFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAEPFG 87

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + EA++FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+ +L+++
Sbjct: 88  PKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATLEQV 147

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  +MPD T+I D+    GL+R   R    + A  D FE++ + IH+ RR  FL IA  
Sbjct: 148 AINGMMPDMTLIFDIDPAEGLRRATLRRGSDDGA--DRFEKETLAIHQARRAAFLAIAAA 205

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +P+RC +VD++    +V   +   V+  ++ R 
Sbjct: 206 EPERCIVVDASAKPDTVEDVVTAAVFAALEARA 238


>gi|49475610|ref|YP_033651.1| thymidylate kinase [Bartonella henselae str. Houston-1]
 gi|59798266|sp|Q6G5D6|KTHY_BARHE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49238417|emb|CAF27644.1| Thymidylate kinase [Bartonella henselae str. Houston-1]
          Length = 215

 Score =  182 bits (463), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/207 (45%), Positives = 131/207 (63%), Gaps = 5/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           SG FI+FEG EG GKTT I LL + L  K YDV  TREPGGT  AE  RH+LLS  V + 
Sbjct: 2   SGYFITFEGGEGVGKTTQIFLLAQHLYGKGYDVLTTREPGGTAGAEVIRHILLSGQVQQH 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G   EAI+F AAR+DHV  VI P+L +GK++LCDRF+DS+  YQG  D      L  L+
Sbjct: 62  YGPLIEAILFTAARIDHVSEVIMPSLQKGKVVLCDRFIDSTRVYQGLNDKVSSSTLAVLE 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI 180
            +++ ++ P  T +LD+P    +KR   R   RE A  +DYFE+ ++ I E+RRQ FL +
Sbjct: 122 CLALNKIKPQITFLLDIPARCSMKRANLR---REKAETIDYFEKDELKIQEQRRQAFLQL 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
           A+ +P R  ++D   + + +A  I +I
Sbjct: 179 AKQEPHRFRVIDGTDTVEVIAQQIRDI 205


>gi|90417679|ref|ZP_01225591.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337351|gb|EAS51002.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1]
          Length = 222

 Score =  182 bits (462), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 89/202 (44%), Positives = 133/202 (65%), Gaps = 3/202 (1%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++FEG EG+GKTT I+ L   L+ + +DV  TREPGG+P A+A RHV+LS   +  G E 
Sbjct: 1   MTFEGGEGSGKTTQIARLAGHLRSEGHDVVTTREPGGSPGADALRHVILSGAAEGLGVEV 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           EA++FAAAR DHV+ +IRPAL  GKI+LCDRF DS+  YQ         + D+++  ++ 
Sbjct: 61  EAMLFAAARADHVDTLIRPALDAGKIVLCDRFHDSTRVYQFLDSELDQDYRDAMERAALG 120

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
           +++P+ TIILD+P  +G++R + R   R     D FE++D  +HE+RRQ F  +A ++P+
Sbjct: 121 DLLPNLTIILDVPASVGVERARQR---RADHSPDRFEKEDEALHERRRQAFRKLAEDEPE 177

Query: 187 RCHIVDSAHSFQSVATNILNIV 208
           RC IVD   +   VA  I +++
Sbjct: 178 RCVIVDGTQAEDKVAAEIRDLI 199


>gi|90424201|ref|YP_532571.1| thymidylate kinase [Rhodopseudomonas palustris BisB18]
 gi|122476154|sp|Q214D4|KTHY_RHOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|90106215|gb|ABD88252.1| thymidylate kinase [Rhodopseudomonas palustris BisB18]
          Length = 230

 Score =  182 bits (461), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 135/215 (62%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G FI+FEG EGAGK+T I LL   L        +TREPGG+P AE  RH++LS G+    
Sbjct: 13  GRFITFEGGEGAGKSTQIKLLAERLNAGRIRCVLTREPGGSPGAEIIRHMILS-GIGSLI 71

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G EAE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG+  +     L+++Q
Sbjct: 72  GGTEAETLLFAAARDDHVHTVIEPALAQGSWVLCDRFTDSTRAYQGQMGAVAPALLNAMQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++ ++ PD TIILD+PV+IG+KR + R   R +A  D FE + +  H K R+ +  IA
Sbjct: 132 RVTIGDLKPDLTIILDVPVEIGVKRARLR---RGAAEPDRFEAESLEFHRKLREAYRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            ++P RC ++D+    + VA      VW  VQKR+
Sbjct: 189 ADEPQRCVLIDANAKVKPVAAK----VWAAVQKRL 219


>gi|192291490|ref|YP_001992095.1| thymidylate kinase [Rhodopseudomonas palustris TIE-1]
 gi|238692602|sp|B3QKH1|KTHY_RHOPT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|192285239|gb|ACF01620.1| dTMP kinase [Rhodopseudomonas palustris TIE-1]
          Length = 230

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 138/215 (64%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G FI+FEG EGAGK+T I LL + L++      VTREPGG+P AEA R  LL+ G+ +  
Sbjct: 13  GRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLA-GIGKLI 71

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            GA+AEA++FAAAR DHV  +I PAL  G+ +LCDRF DS+ AYQG+  +     L++LQ
Sbjct: 72  GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ ++ PD T+ILD+PV+IGL R   R   R S   D FE + +  H   R++F  IA
Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +P+RC ++D+    + VA  I    W+ V+ R+
Sbjct: 189 AQEPERCALIDANAEPEEVADRI----WQAVRLRL 219


>gi|316934063|ref|YP_004109045.1| thymidylate kinase [Rhodopseudomonas palustris DX-1]
 gi|315601777|gb|ADU44312.1| thymidylate kinase [Rhodopseudomonas palustris DX-1]
          Length = 230

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G FI+FEG EGAGK+T I LL + L++      VTREPGG+P AEA R  LL+ G+ +  
Sbjct: 13  GRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLA-GIGKLI 71

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            GA+AEA++FAAAR DHV  +I PAL  G+ +LCDRF DS+ AYQG+  + +   L++LQ
Sbjct: 72  GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVRLELLEALQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ ++ PD T+ILD+PV+IGL R   R   R S   D FE + +  H   R++F  IA
Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +P+RC ++D+    + VA      VW+ V+ R+
Sbjct: 189 AQEPERCVLIDANAEPEEVADR----VWQAVRLRL 219


>gi|39935842|ref|NP_948118.1| thymidylate kinase [Rhodopseudomonas palustris CGA009]
 gi|81562489|sp|Q6N643|KTHY_RHOPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|39649696|emb|CAE28217.1| thymidylate kinase [Rhodopseudomonas palustris CGA009]
          Length = 230

 Score =  179 bits (455), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/215 (44%), Positives = 138/215 (64%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G FI+FEG EGAGK+T I LL + L++      VTREPGG+P AEA R  LL+ G+ +  
Sbjct: 13  GRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLA-GIGKLI 71

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            GA+AEA++FAAAR DHV  +I PAL  G+ +LCDRF DS+ AYQG+  +     L++LQ
Sbjct: 72  GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ ++ PD T+ILD+PV+IGL R   R   R S   D FE + +  H   R++F  IA
Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +P+RC ++D+    + VA  I    W+ V+ R+
Sbjct: 189 AQEPERCVLIDANAEPEEVADRI----WQAVRLRL 219


>gi|92117540|ref|YP_577269.1| thymidylate kinase [Nitrobacter hamburgensis X14]
 gi|122417817|sp|Q1QLT8|KTHY_NITHX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91800434|gb|ABE62809.1| thymidylate kinase [Nitrobacter hamburgensis X14]
          Length = 230

 Score =  179 bits (454), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 7/213 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GK+T I++L   L        VTREPGG+P AE  RH++LS      G
Sbjct: 13  GRFITFEGGEGSGKSTQINILAERLNAAKLRAIVTREPGGSPGAEIIRHLVLSGMGKLLG 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AE ++FAAAR DHV  VI+PAL +G  +LCDRF DS+ AYQG         L++L+ +
Sbjct: 73  AYAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRAYQGRLGDVLPGVLNALERV 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ ++ PD T+ILD+PV+IG++R   R   R S   D FE +DV  H+K R  + DIA +
Sbjct: 133 TIGDLKPDLTVILDVPVEIGMQRAAVR---RGSGAPDRFEAEDVAFHQKLRDAYRDIAAS 189

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            P RC ++D+     +VA      VW  ++ RV
Sbjct: 190 DPQRCVVIDANADVNTVAAG----VWAALRDRV 218


>gi|115524871|ref|YP_781782.1| thymidylate kinase [Rhodopseudomonas palustris BisA53]
 gi|115518818|gb|ABJ06802.1| thymidylate kinase [Rhodopseudomonas palustris BisA53]
          Length = 229

 Score =  177 bits (450), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G FISFEG EGAGK+T I LL + L+R      +TREPGG+P AE  RH+LLS G+    
Sbjct: 12  GRFISFEGGEGAGKSTQIKLLAQRLERAGLRTKITREPGGSPGAEIIRHLLLS-GIGSLI 70

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            GA AE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG   +     L++L+
Sbjct: 71  GGASAETVLFAAARDDHVHTVIAPALAQGTWVLCDRFSDSTRAYQGRLGAVPPALLNALE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++  + PD T+ILD+PV+ G++R   R   R  A  D FE + +  H   R+ +  IA
Sbjct: 131 RVTIDGLKPDLTLILDVPVETGVRRAAVR---RGDATPDRFEAEGLEFHRGLREAYRQIA 187

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            + P RC ++D+  + ++VA      VW  V++R+
Sbjct: 188 ADNPQRCVLIDADAALETVAER----VWNAVRQRL 218


>gi|295689513|ref|YP_003593206.1| thymidylate kinase [Caulobacter segnis ATCC 21756]
 gi|295431416|gb|ADG10588.1| thymidylate kinase [Caulobacter segnis ATCC 21756]
          Length = 208

 Score =  177 bits (450), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEG EGAGK+T I  L   LQ   +DV VTREPGG+P AEA R +L++   D
Sbjct: 1   MTQGFFISFEGGEGAGKSTQIRRLAERLQAAGHDVVVTREPGGSPGAEAIRELLVNGAAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E ++  AAR DHVE VIRPAL  G ++LCDRF DS+ AYQG    +    + SL
Sbjct: 61  RWSPVTETLLMYAARRDHVERVIRPALARGAVVLCDRFADSTRAYQGAGGDAPASLIASL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  +   +PD T+ILDLP +IGL+R + R           FE K +  HE+ R  +L+I
Sbjct: 121 EDHVLSGTVPDLTLILDLPAEIGLERAEAR------GGAARFESKGLAFHERLRAGYLEI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           AR +P+RC ++++     +V   I   V + +++
Sbjct: 175 ARREPERCVVIEANADIDAVTAAISRTVDQRLER 208


>gi|163853588|ref|YP_001641631.1| dTMP kinase [Methylobacterium extorquens PA1]
 gi|163665193|gb|ABY32560.1| dTMP kinase [Methylobacterium extorquens PA1]
          Length = 244

 Score =  177 bits (450), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 93/210 (44%), Positives = 131/210 (62%), Gaps = 7/210 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      +
Sbjct: 8   GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AEA++FAAAR+DH+EN+IRPAL  G I+LCDRF DS+ AYQG         +DSL+ 
Sbjct: 68  GPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++++++ PD T+ILDLP + GL R + R +   +   D FE + +  HE+ R  F  IA 
Sbjct: 128 VTLEDLRPDLTLILDLPPEAGLARARRRGAGEPA---DRFEAEGMRFHERLRTAFRSIAE 184

Query: 183 NQPDRCHIVDSAHSFQSVATNI---LNIVW 209
            +P+RC ++D+     +V T I   + + W
Sbjct: 185 AEPERCRVIDADLGLDAVETAIAAAIAVRW 214


>gi|296445855|ref|ZP_06887807.1| thymidylate kinase [Methylosinus trichosporium OB3b]
 gi|296256683|gb|EFH03758.1| thymidylate kinase [Methylosinus trichosporium OB3b]
          Length = 238

 Score =  177 bits (449), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 91/207 (43%), Positives = 126/207 (60%), Gaps = 2/207 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+ EG EGAGK+T + LL+  L  +  +   TREPGG+P AEA R  LL      
Sbjct: 16  HPGRFITLEGGEGAGKSTQMRLLQERLAERGVEAIATREPGGSPHAEALREALLGGKAAP 75

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   EAI+F+AAR+DH++ +I+PAL  G  ++CDRF DS+ AYQG R       +  L+
Sbjct: 76  LGPLGEAILFSAARIDHLDRLIKPALARGAWVICDRFADSTRAYQGARGGVDARLITLLE 135

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++    PD TIILD+P +IGL+R   R    ES   D FER+ +  HE  R+ FLDIA
Sbjct: 136 RVALLGAKPDLTIILDIPAEIGLERASRRRRPDESP--DRFEREGLAFHEGLRRAFLDIA 193

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P+RC +VD+    + VA  I +IV
Sbjct: 194 AGEPERCCVVDARAPEREVAQAIWHIV 220


>gi|240141008|ref|YP_002965488.1| thymidylate kinase [Methylobacterium extorquens AM1]
 gi|240010985|gb|ACS42211.1| thymidylate kinase [Methylobacterium extorquens AM1]
          Length = 249

 Score =  176 bits (447), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 4/206 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      +
Sbjct: 8   GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AEA++FAAAR+DH+ N+IRPAL  G I+LCDRF DS+ AYQG         +DSL+ 
Sbjct: 68  GPFAEALMFAAARIDHIGNLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++++++ PD T+ILDLP + GL R + R +       D FE + +  HE+ R  F  IA 
Sbjct: 128 VTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIAE 184

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            +P+RC ++D+     +V T I N +
Sbjct: 185 AEPERCRVIDADLGPDAVETAIANAI 210


>gi|85715533|ref|ZP_01046514.1| thymidylate kinase [Nitrobacter sp. Nb-311A]
 gi|85697728|gb|EAQ35604.1| thymidylate kinase [Nitrobacter sp. Nb-311A]
          Length = 230

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/214 (42%), Positives = 136/214 (63%), Gaps = 9/214 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEG EG+GK+T I +L +R L  K + + VTREPGG+P AE  RH++LS      
Sbjct: 13  GRFITFEGGEGSGKSTQIKILAERLLAAKQHAI-VTREPGGSPGAEIIRHLVLSGVGKLL 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G +AE ++FAAAR DHV  VIRPAL +G  +LCDRF DS+  YQG+  +     L++++ 
Sbjct: 72  GVDAETLLFAAARDDHVRTVIRPALEQGVWVLCDRFADSTRVYQGQLGNVLPGVLNAMER 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++ ++ PD T+ILD+PV++GL+R   R   R S   D FE +D+  H K R  + +IA 
Sbjct: 132 VTIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDLAFHRKLRDAYREIAA 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           N P RC ++D+     +VA  I    W  +++R+
Sbjct: 189 NDPQRCVVIDADTDLDTVAARI----WAALRERM 218


>gi|328543898|ref|YP_004304007.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1]
 gi|326413642|gb|ADZ70705.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1]
          Length = 231

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/192 (48%), Positives = 123/192 (64%), Gaps = 2/192 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I  L   L     DV VTREPGG+P AE  R +LLS G    G
Sbjct: 3   GRFITFEGGEGAGKSTQIRRLHDRLAALGIDVVVTREPGGSPGAEFIRDLLLSGGARGLG 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAAAR DHV+  IRPAL  GK +LCDRF DS+  YQGE     HL L  L+  
Sbjct: 63  PRGEAMLFAAARADHVDATIRPALEAGKWVLCDRFADSTRVYQGEAGVDAHL-LGLLETA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  ++ PD T+++D+P D+GLKRV  R  +       D FE + + +HE+RR +FL++AR
Sbjct: 122 ATLDLRPDLTVLIDVPADVGLKRVAARSRNAGADRGPDRFEDEALGVHERRRALFLELAR 181

Query: 183 NQPDRCHIVDSA 194
           ++P+R  IVD +
Sbjct: 182 DEPERIRIVDGS 193


>gi|254469249|ref|ZP_05082654.1| thymidylate kinase [Pseudovibrio sp. JE062]
 gi|211961084|gb|EEA96279.1| thymidylate kinase [Pseudovibrio sp. JE062]
          Length = 227

 Score =  176 bits (446), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/215 (41%), Positives = 132/215 (61%), Gaps = 5/215 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FISFEG EGAGK+T I  L+  L  K  +   TREPGG+  AE  R VLLS    ++
Sbjct: 2   SGIFISFEGGEGAGKSTQIQRLRDKLAAKGIEAVTTREPGGSQGAELVREVLLSGAAKDY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AEA++FAAAR DH++ +I+PAL  GK +LCDRF DSS  YQGE        +++LQ+
Sbjct: 62  GVTAEAVLFAAARADHIDTLIKPALENGKWVLCDRFADSSRVYQGESGVPTPT-VEALQQ 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++    P+ T+++++  ++GL RV  R +  E    D FE   +  H +R+++FL++AR
Sbjct: 121 VAIAGHNPNMTLLINVTPEVGLARVSKRTAPVEFDGPDRFETDTLETHRRRQELFLEMAR 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           N+PDR  ++D       V  +I    W  VQ R +
Sbjct: 181 NEPDRIVVIDGDQPQDKVTEDI----WRAVQDRFA 211


>gi|254503506|ref|ZP_05115657.1| thymidylate kinase [Labrenzia alexandrii DFL-11]
 gi|222439577|gb|EEE46256.1| thymidylate kinase [Labrenzia alexandrii DFL-11]
          Length = 224

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 1/214 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEG EGAGK+T I+ LK FL+     V VTREPGG+P AE  R +LLS    + G
Sbjct: 3   GHFISFEGGEGAGKSTQIARLKAFLESLGKTVIVTREPGGSPGAEKIRAMLLSGEARDLG 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAAAR DHV+ +I+PAL  G  +LCDR+ DS+  YQGE     + +L  L+  
Sbjct: 63  PRGEAMLFAAARADHVDTLIKPALDRGDWVLCDRYSDSTLVYQGEAGVDLN-YLRLLETA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V  V P+ TI++D+P ++GL RVQ R     S   D FE + + +HE RR+ FLD+A  
Sbjct: 122 AVAGVRPELTILIDVPAELGLARVQERAKTDTSGGPDRFEGEALRVHEGRRKRFLDLAAE 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +  R  ++D +   ++V+ +I + V    Q +++
Sbjct: 182 EAYRFAVIDGSKDLEAVSASIQSAVEAAFQDQLT 215


>gi|27379629|ref|NP_771158.1| thymidylate kinase [Bradyrhizobium japonicum USDA 110]
 gi|46576547|sp|Q89LM5|KTHY_BRAJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|27352781|dbj|BAC49783.1| thymydilate kinase [Bradyrhizobium japonicum USDA 110]
          Length = 228

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/215 (43%), Positives = 129/215 (60%), Gaps = 7/215 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG GK+T I  L   L+       VTREPGG+P AE  RH++LS      G
Sbjct: 13  GRFITFEGGEGTGKSTQIKKLADRLKAARMRTLVTREPGGSPGAEIMRHLVLSGMGKLLG 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG   S     ++++Q +
Sbjct: 73  PEAETLLFAAARDDHVHTVIEPALKQGIWVLCDRFADSTRAYQGSLGSVSPGLINAMQRV 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ ++ PD TIILDLPV+IGL+R   R   R S   D FE + +  H+  R+ +  IA +
Sbjct: 133 TIGDLKPDLTIILDLPVEIGLQRAAAR---RGSGTPDRFEGEQLSFHQGLREAYRKIAAD 189

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
           +P RC ++D+     +VA      VW  ++ R+ P
Sbjct: 190 EPARCVLIDANSDPDTVAGR----VWSALRDRLLP 220


>gi|16126067|ref|NP_420631.1| thymidylate kinase [Caulobacter crescentus CB15]
 gi|221234837|ref|YP_002517273.1| thymidylate kinase [Caulobacter crescentus NA1000]
 gi|10720067|sp|Q9RQJ9|KTHY_CAUCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|6318310|gb|AAF06831.1|AF099189_1 thymydilate kinase [Caulobacter crescentus CB15]
 gi|13423259|gb|AAK23799.1| thymidylate kinase [Caulobacter crescentus CB15]
 gi|220964009|gb|ACL95365.1| thymidylate kinase [Caulobacter crescentus NA1000]
          Length = 208

 Score =  175 bits (443), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 6/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEG EGAGK+T I  L   L+   +DV VTREPGG+P AEA R +L++   D
Sbjct: 1   MTQGFFISFEGGEGAGKSTQIRRLADRLKAAGHDVIVTREPGGSPGAEAIRELLVNGAAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E+++  AAR DH+E VIRP L  G ++LCDRF DS+ AYQG    +    + +L
Sbjct: 61  RWSPVTESLLMYAARRDHIERVIRPGLARGAVVLCDRFADSTRAYQGAGGDAPASLIAAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E  +   +P  T+ILDLP ++GL+R + R           FE K +  HE+ R  +L+I
Sbjct: 121 EEHVLGGTVPVLTLILDLPAEVGLQRAEARGGAAR------FESKGLAFHERLRAGYLEI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           AR +PDRC ++D+     +V   I ++V
Sbjct: 175 ARREPDRCVVIDADAELDAVTAAISDVV 202


>gi|159184784|ref|NP_354504.2| thymydilate kinase [Agrobacterium tumefaciens str. C58]
 gi|159140072|gb|AAK87289.2| thymydilate kinase [Agrobacterium tumefaciens str. C58]
          Length = 188

 Score =  174 bits (441), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 2/178 (1%)

Query: 37  VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           VTREPGG+P AEA RHV+LS   + FG   EAI+FAAAR DHVE VIRPAL  G+I+LCD
Sbjct: 3   VTREPGGSPGAEAVRHVILSGAAESFGVRMEAILFAAARNDHVEEVIRPALARGEIVLCD 62

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           RFLDSS  YQG   + +  F+++LQ I++  V+P+ T+I D+  + GL R + R    E 
Sbjct: 63  RFLDSSRVYQGTTGNLEPDFIETLQRIAIDGVVPELTLIFDIAAEKGLARARKRAD--EG 120

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A  D FE++++  HEKRR+ +LDIA  +P RC IV++      V  ++++ V  L+++
Sbjct: 121 ATPDRFEKEEIETHEKRREAYLDIALAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 178


>gi|254563522|ref|YP_003070617.1| thymidylate kinase [Methylobacterium extorquens DM4]
 gi|254270800|emb|CAX26805.1| thymidylate kinase [Methylobacterium extorquens DM4]
          Length = 244

 Score =  174 bits (440), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/200 (45%), Positives = 126/200 (63%), Gaps = 4/200 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      +
Sbjct: 8   GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AEA++FAAAR+DH+EN+IRPAL  G I+LCDRF DS+ AYQG         +DSL+ 
Sbjct: 68  GPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++++++ PD T+ILDLP + GL R + R +       D FE + +  HE+ R  F  IA 
Sbjct: 128 VTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRAAFRSIAE 184

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
            +P+RC ++D+     +V T
Sbjct: 185 AEPERCRVIDADLGPDAVET 204


>gi|148255489|ref|YP_001240074.1| thymidylate kinase [Bradyrhizobium sp. BTAi1]
 gi|166221722|sp|A5EJ24|KTHY_BRASB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146407662|gb|ABQ36168.1| thymidylate kinase [Bradyrhizobium sp. BTAi1]
          Length = 226

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 7/213 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F++FEG EGAGK+T I +L   L+ +   V +TREPGG+P AE  RH++LS      G
Sbjct: 13  GRFVTFEGGEGAGKSTQIKMLAARLESEGMRVVLTREPGGSPGAEIMRHLVLSGMGKLLG 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AEAE ++FAAAR DHV NVI PAL +G  +LCDRF DS+ AYQG         L+++Q +
Sbjct: 73  AEAETLLFAAARDDHVRNVILPALSQGSWVLCDRFFDSTRAYQGSLGKVAPDVLNAMQRV 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ ++ PD T+ILD+PV++GLKR   R         D FE +D+  H+  R  F  IA +
Sbjct: 133 TIGDLKPDLTLILDVPVEVGLKRAAARRGAGAP---DRFEAEDIKFHKGLRDAFHKIADD 189

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            P RC ++D+      V+     +VW+ V++R+
Sbjct: 190 DPKRCVLIDATAGPDPVSL----LVWDAVRERL 218


>gi|304391675|ref|ZP_07373617.1| thymidylate kinase [Ahrensia sp. R2A130]
 gi|303295904|gb|EFL90262.1| thymidylate kinase [Ahrensia sp. R2A130]
          Length = 215

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 126/205 (61%), Gaps = 3/205 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I  L + L+   ++V VTREPGGT  AEA RHV+LS     FG
Sbjct: 3   GHFITFEGGEGAGKSTQIKRLAKKLEDDGHEVVVTREPGGTTGAEAVRHVVLSGAAQPFG 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E EA++FAAAR D+V  +I+PAL  G I+LCDRF+DSS  YQG         +D L+  
Sbjct: 63  TELEAVLFAAARADNVRELIKPALARGAIVLCDRFMDSSRVYQGASGGVSSNMMDMLERA 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             ++  PD T++ DL  + GLKR  + +   +    D +E + +     RR  +L IA+ 
Sbjct: 123 VTEDARPDLTLLFDLSPEEGLKRAADVW---KDDGPDRYESEALAQQHIRRDAYLAIAKA 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +PDRC I+D++ + ++V+  +  ++
Sbjct: 180 EPDRCKIIDASKTLRTVSKQVDRVI 204


>gi|209885250|ref|YP_002289107.1| thymidylate kinase [Oligotropha carboxidovorans OM5]
 gi|229621734|sp|B6JEC6|KTHY_OLICO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|209873446|gb|ACI93242.1| thymidylate kinase [Oligotropha carboxidovorans OM5]
          Length = 228

 Score =  172 bits (436), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/214 (43%), Positives = 130/214 (60%), Gaps = 7/214 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GK+T I LL   L+ +  +  VTREPGG+P AE  RH+LLS      G
Sbjct: 13  GRFITFEGGEGSGKSTQIQLLAERLKGQGIETLVTREPGGSPGAEIVRHLLLSGVGKLLG 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+AE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG        F+++L   
Sbjct: 73  ADAETLLFAAARDDHVHQVIEPALKKGVWVLCDRFTDSTAAYQGAAGKVDAAFIEALTHA 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ ++ PD T+ILD+PV +GL R   R   R  A  D FE++ +  HE  R  +  IA +
Sbjct: 133 TIGDLEPDLTLILDVPVAVGLHRAIKR---RGKAVADRFEQESLSFHESLRDAYRKIAAD 189

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            P RC +VD+     +V+  I    WE +Q R++
Sbjct: 190 NPKRCAVVDANADAATVSERI----WETMQHRLA 219


>gi|218532450|ref|YP_002423266.1| dTMP kinase [Methylobacterium chloromethanicum CM4]
 gi|218524753|gb|ACK85338.1| dTMP kinase [Methylobacterium chloromethanicum CM4]
          Length = 244

 Score =  172 bits (435), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 89/191 (46%), Positives = 122/191 (63%), Gaps = 4/191 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      +
Sbjct: 8   GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AEA++FAAAR+DH+EN+IRPAL  G I+LCDRF DS+ AYQG         +DSL+ 
Sbjct: 68  GPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++ ++ PD T+ILDLP + GL R + R +       D FE + +  HE+ R  F  IA 
Sbjct: 128 VTLVDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIAE 184

Query: 183 NQPDRCHIVDS 193
            +P+RC ++D+
Sbjct: 185 AEPERCRVIDA 195


>gi|299133890|ref|ZP_07027084.1| thymidylate kinase [Afipia sp. 1NLS2]
 gi|298591726|gb|EFI51927.1| thymidylate kinase [Afipia sp. 1NLS2]
          Length = 232

 Score =  170 bits (431), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 94/218 (43%), Positives = 127/218 (58%), Gaps = 7/218 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GK+T I +L   L+ +  +  VTREPGG+P AE  RH+LLS      G
Sbjct: 17  GRFITFEGGEGSGKSTQIQMLADHLKSQGIETLVTREPGGSPGAEIVRHLLLSGVGKLLG 76

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+AE ++FAAAR DHV  VIRPAL +G  +LCDRF DS+ AYQG        F+ +L   
Sbjct: 77  ADAETLLFAAARDDHVHQVIRPALDKGTWVLCDRFTDSTAAYQGAAGKVDPAFIQALTHA 136

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD T ILD+PV +GL+R   R   R     D FE + +  HE  R+ +  IA +
Sbjct: 137 TIGRLEPDLTFILDVPVAVGLQRAIKR---RGRTAADRFEGESLAFHESLREAYRRIAAD 193

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P RC ++D+      VA  I     E +Q R+   SS
Sbjct: 194 NPARCVVIDANAEPAKVAERI----REALQSRLPAPSS 227


>gi|154253550|ref|YP_001414374.1| dTMP kinase [Parvibaculum lavamentivorans DS-1]
 gi|154157500|gb|ABS64717.1| dTMP kinase [Parvibaculum lavamentivorans DS-1]
          Length = 209

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/217 (42%), Positives = 128/217 (58%), Gaps = 8/217 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EG EGAGK+T +  L   L+     V +TREPGG P AEA RH+L++  V 
Sbjct: 1   MPRARFITLEGGEGAGKSTQVRRLAARLEAAGQRVTITREPGGAPGAEAIRHLLVTGDVA 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +  +AE ++  AAR DH+   IRPAL  G  ++CDRF+DS+ AYQG         ++ L
Sbjct: 61  RWTPKAEMLLHFAAREDHLSRTIRPALERGDWVICDRFVDSTMAYQGFAQGLGPELVNEL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +EI + + MP  T+ILDLPV+ GL R  +R    E    D +ER D+  HE  RQ F  I
Sbjct: 121 KEIVIGDDMPGLTLILDLPVETGLARAGSRGQGAE----DRYERMDLRFHETLRQAFETI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A+N+P+RC +VD++ +   VA  I    W  V+ R+S
Sbjct: 177 AKNEPERCVMVDASQTEDEVAEAI----WAEVKPRLS 209


>gi|144899825|emb|CAM76689.1| Thymidylate kinase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 211

 Score =  168 bits (426), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 5/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T + LL   L+ +  +V +TREPGG   AEA R +L+S  VD
Sbjct: 1   MTDGRFITFEGGEGAGKSTQVRLLAESLRGRKREVVLTREPGGADGAEAIRTLLVSGAVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A  EA++ +AAR DH+   + PAL  G  ++CDRF DS+ AYQG         +  L
Sbjct: 61  RWDARTEALLHSAARRDHLVRTVWPALERGAWVICDRFADSTLAYQGYGHGLDRALIGQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E+++    PD T+ILDLPV+ GLKR   R         D +ER  +  H++ RQ FL I
Sbjct: 121 AEVTMGRFRPDLTLILDLPVEEGLKRAGGR-----GGAEDRYERMGLDFHQRLRQGFLAI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A  +P RC ++D+  S ++V  +IL  V
Sbjct: 176 ASAEPRRCAVIDATRSPEAVHQDILAAV 203


>gi|75675656|ref|YP_318077.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255]
 gi|123613520|sp|Q3SSL6|KTHY_NITWN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|74420526|gb|ABA04725.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255]
          Length = 230

 Score =  167 bits (424), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 84/188 (44%), Positives = 120/188 (63%), Gaps = 3/188 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GK+T I +L   LQ       VTREPGG+P AE  RH++LS      G
Sbjct: 13  GRFITFEGGEGSGKSTQIRILAERLQAAKLRAIVTREPGGSPGAEIIRHLVLSGVGKLLG 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+AE ++FAAAR DHV  VI+PAL +G  +LCDRF DS+  YQG+  +     L++++ +
Sbjct: 73  ADAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRVYQGQLGNVLPGVLNAMERV 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ ++ PD T+ILD+PV++GL+R   R   R S   D FE +D+  H K R  +  IA +
Sbjct: 133 TIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDIAFHRKLRDAYRAIAAS 189

Query: 184 QPDRCHIV 191
            P RC ++
Sbjct: 190 DPQRCVVI 197


>gi|188583893|ref|YP_001927338.1| dTMP kinase [Methylobacterium populi BJ001]
 gi|179347391|gb|ACB82803.1| dTMP kinase [Methylobacterium populi BJ001]
          Length = 236

 Score =  167 bits (422), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/197 (44%), Positives = 123/197 (62%), Gaps = 10/197 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
           G+FI+FEG EGAGK+T I+ L   L+        +  ++  TREPGGTP AEA R  LL 
Sbjct: 8   GVFITFEGGEGAGKSTQIARLAATLRDEGGGREGRGREIVTTREPGGTPRAEALRAALLR 67

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                +G  AEA++FAAAR+DH+EN IRPAL  G I+LCDRF DS+ AYQG     +   
Sbjct: 68  GVAKPYGPFAEALMFAAARIDHIENRIRPALARGAIVLCDRFSDSTRAYQGAAGGLEPEL 127

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + SL+ +++ ++ PD T+ILDLP + GL R Q+R     +   D FE + +  H++ R  
Sbjct: 128 IASLERVTLGDLRPDLTLILDLPPEAGLARAQSRGGGEPA---DRFEAEGMRFHQRLRTA 184

Query: 177 FLDIARNQPDRCHIVDS 193
           F  IA  +P+RC I+D+
Sbjct: 185 FRAIAEAEPERCRIIDA 201


>gi|167646661|ref|YP_001684324.1| thymidylate kinase [Caulobacter sp. K31]
 gi|167349091|gb|ABZ71826.1| dTMP kinase [Caulobacter sp. K31]
          Length = 208

 Score =  165 bits (418), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEG EGAGK+T I  L   L+    DV +TREPGG+P AE  R ++L+  VD
Sbjct: 1   MTRGTFISFEGGEGAGKSTQIRRLAERLKADGADVVLTREPGGSPGAEQIRDLILNGHVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E ++  A+R DHVE VIRPAL  G I+LCDRF DS+ AYQG    +    + +L
Sbjct: 61  RWSPITETLLMYASRRDHVERVIRPALERGAIVLCDRFADSTRAYQGAGGEAPIALIKAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E  +   +PD T+I D+P ++GL R   R           FE K +  HE+  + FL+I
Sbjct: 121 EEHVLGGTVPDLTLIFDIPAEVGLARALAR------GGEARFESKGLAFHERLGEAFLEI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           AR +P+RC ++++  +  +V  +    VW  V  R+ 
Sbjct: 175 ARREPERCVVIEADDAIDAVWAD----VWGAVSARLG 207


>gi|302038227|ref|YP_003798549.1| thymidylate kinase [Candidatus Nitrospira defluvii]
 gi|300606291|emb|CBK42624.1| Thymidylate kinase [Candidatus Nitrospira defluvii]
          Length = 241

 Score =  165 bits (417), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 118/211 (55%), Gaps = 6/211 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG EG GK+T   LL   L+ + YD   TREPGGTP AE  R VLL    +   
Sbjct: 11  GLFITLEGTEGCGKSTQAKLLGEHLRNQGYDTVETREPGGTPLAEKIRSVLLDRADEPVA 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E EA +  AAR  HV  VI PAL  G I+LCDRF+DS+ AYQG         L+ L  +
Sbjct: 71  PETEAFLVLAARRQHVAQVIEPALARGSIVLCDRFIDSTLAYQGYARGLDIATLERLNRL 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   +MPD T++ DLPV  GL R       R +A L+  +R+ +  H + R  FLD+A+ 
Sbjct: 131 ATHTLMPDLTLVFDLPVSTGLAR------RRSAAELNRLDRESLRFHRRVRAGFLDLAKR 184

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P R  IV +  S ++VA  +  IV  L+ +
Sbjct: 185 HPRRIQIVSARASRETVARAVARIVTPLLDR 215


>gi|170744323|ref|YP_001772978.1| dTMP kinase [Methylobacterium sp. 4-46]
 gi|168198597|gb|ACA20544.1| dTMP kinase [Methylobacterium sp. 4-46]
          Length = 226

 Score =  164 bits (416), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/194 (43%), Positives = 121/194 (62%), Gaps = 3/194 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+ EG EGAGK+T ++ L  +L+R + +V  TREPGG+P AE  R  LL+    +
Sbjct: 6   RPGLFITLEGGEGAGKSTQVARLAEWLRRSDREVVTTREPGGSPRAEQIRTALLAGAAKD 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AEA++F+AARLDH+ ++IRPAL  G +++CDRF DS+ AYQG         + +L+
Sbjct: 66  HGPFAEALLFSAARLDHLASLIRPALARGAVVVCDRFADSTRAYQGVAGGIDPECVAALE 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + V    PD T+ILDLP +IGL R + R   L      D FE + +  H++ R+ F  I
Sbjct: 126 RVVVGATRPDLTLILDLPPEIGLARARGRERGLARGP--DRFEAEALAFHQRLREAFRGI 183

Query: 181 ARNQPDRCHIVDSA 194
           A  +P RC +VD+A
Sbjct: 184 AAREPARCALVDAA 197


>gi|95930676|ref|ZP_01313410.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684]
 gi|95133328|gb|EAT14993.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684]
          Length = 216

 Score =  164 bits (415), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 6/213 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT I LL   L+ + +DV  TREPGG   A+  R VLL    +   
Sbjct: 2   GQFITFEGIEGCGKTTQIRLLATALRHQGHDVIETREPGGCDIADQIRAVLLDAKNNRMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120
           +  E +++AAAR  HV  VIRPAL  GK +LCDRF D++ AYQG     + L +D   +L
Sbjct: 62  SPTELLLYAAARAQHVAEVIRPALDAGKTVLCDRFCDATLAYQG---YGRQLDIDQITTL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + Q V PD T++LDLPV+IGL R + R         D FE++ +  H++ RQ +L +
Sbjct: 119 NAYACQGVRPDTTLLLDLPVEIGLGRARQRNEQHSGPNEDRFEQESLNFHQRIRQAYLQL 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A N+P R  I+D+    Q+VA  I + +  ++Q
Sbjct: 179 ADNEPQRFLIIDAQGKPQTVAERIASAMNTIIQ 211


>gi|39997327|ref|NP_953278.1| thymidylate kinase [Geobacter sulfurreducens PCA]
 gi|59798354|sp|Q74AX0|KTHY_GEOSL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|39984218|gb|AAR35605.1| thymidylate kinase [Geobacter sulfurreducens PCA]
 gi|298506264|gb|ADI84987.1| thymidylate kinase [Geobacter sulfurreducens KN400]
          Length = 213

 Score =  164 bits (414), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 123/212 (58%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT I    + L+   + V VTREPGG P A+  R +LL  G     
Sbjct: 2   GYFITFEGIEGCGKTTQIKRAAQSLREAGHRVVVTREPGGCPIADDIRAILLDAGNSAMV 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR  HV  VI PAL EG ++LCDRF DS+  YQG   +     +  L  +
Sbjct: 62  PTTELLLYAAARAQHVAEVIAPALAEGAVVLCDRFTDSTLVYQGFGRNLDRDLIARLNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ PD TI+LD PV +GL R   R + R++   + FER+ ++ HE+ R+ FL +A  
Sbjct: 122 AAGQIRPDLTILLDCPVAVGLARAAARINSRQTNREERFERESLLFHERVREGFLSLAGG 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +P R  ++D     ++ AT + +++   V +R
Sbjct: 182 EPHRFAVIDGNDGVEATATAVADVLLNRVPRR 213


>gi|170747926|ref|YP_001754186.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831]
 gi|170654448|gb|ACB23503.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831]
          Length = 240

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/194 (44%), Positives = 119/194 (61%), Gaps = 2/194 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+FEG EGAGK+T I+ L   L+ R    V VTREPGG+P AE  R  LL      
Sbjct: 13  GGTFITFEGGEGAGKSTQIARLAATLRARSGRPVCVTREPGGSPRAEEIRAALLDGVAKP 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G  AEA++F+AAR+DH++ +IRPAL  G+ +LCDRF+DS+ AYQG         +D+L+
Sbjct: 73  YGPFAEALLFSAARIDHLDRLIRPALRRGETVLCDRFIDSTRAYQGAAGGLDPGIVDALE 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + V    PD T+ILDL  + GL R   R + R     D FE + +  H + R+ FL IA
Sbjct: 133 RVVVGPTRPDLTLILDLAPESGLARAAGRGA-RTGQGADRFEAEALDFHVRLREAFLAIA 191

Query: 182 RNQPDRCHIVDSAH 195
             +PDRC ++D++ 
Sbjct: 192 GAEPDRCAVIDASR 205


>gi|302383105|ref|YP_003818928.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193733|gb|ADL01305.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264]
          Length = 208

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 5/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G FI+FEG EG GK+T ++LL   L  +  DV  TREPGG+P  EA R +++S   D
Sbjct: 1   MSRGRFITFEGGEGTGKSTQVALLVDRLGARGRDVIRTREPGGSPGGEAIRSLVVSGSAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A  E ++  AAR DH+E  IRPAL  G+ ++CDRF DSS AYQG    ++  F+++L
Sbjct: 61  RWSARTELLLMFAARSDHLERTIRPALEAGQWVVCDRFADSSRAYQGLAGGAETAFVEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               V    PD T+I DLP ++GL+R     +L  +     FE K +  H+  R+ F  I
Sbjct: 121 DAHVVGTNQPDLTLIFDLPAEVGLER-----ALARAQGDTRFESKGLAFHQNLRRAFQTI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           AR  P+RC ++D+  S   V   +   V
Sbjct: 176 ARAHPERCRLIDATGSIDDVQARVWAAV 203


>gi|329889614|ref|ZP_08267957.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568]
 gi|328844915|gb|EGF94479.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568]
          Length = 208

 Score =  160 bits (406), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 9/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGKTT   LL   L+ +  DV  TREPGG+P AE  R++ +S   D
Sbjct: 1   MQRGRFITFEGGEGAGKTTQARLLVERLRARGLDVLQTREPGGSPGAEEIRNIAVSGEAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A  E ++  AAR DH+E  I PAL  G+ ++CDRF DSS  YQG    +    +++L
Sbjct: 61  RWSARTETLLMYAARSDHLERTILPALEAGRWVVCDRFADSSRVYQGAGGGTPESLIEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V    PD T++ DLPV++GL R   R  L E+     FE K +  H+K R  FL +
Sbjct: 121 DDAVVNGDQPDLTLVFDLPVEVGLDRAFGR-GLFET----RFESKGLAFHQKLRDGFLKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           A   P+RC ++D+      V+  +    W +V++R+
Sbjct: 176 AERHPERCVVLDATGEVDEVSARL----WAVVEERL 207


>gi|220926669|ref|YP_002501971.1| thymidylate kinase [Methylobacterium nodulans ORS 2060]
 gi|219951276|gb|ACL61668.1| thymidylate kinase [Methylobacterium nodulans ORS 2060]
          Length = 225

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 3/190 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+FI+ EG EGAGK+T I+ L   L+  + +V  TREPGG+P AE  R  LL+    +
Sbjct: 6   QPGVFITVEGGEGAGKSTQIARLAERLRAGDREVITTREPGGSPRAEQIRTALLAGAAKD 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AEA++F+AARLDH+  +IRPAL  G ++LCDRF DS+ AYQG         + +L+
Sbjct: 66  HGPFAEALLFSAARLDHLNTLIRPALARGAVVLCDRFADSTRAYQGAAGGIDPQEVAALE 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + V    PD T+ILDLP ++GL R + R S   S   D FE + +  H++ R+ F  IA
Sbjct: 126 RVVVGPTRPDLTLILDLPPELGLARARRRAS---SPGPDRFEAETLSFHQRLREAFRAIA 182

Query: 182 RNQPDRCHIV 191
             +P+RC ++
Sbjct: 183 AQEPERCVLI 192


>gi|114570004|ref|YP_756684.1| thymidylate kinase [Maricaulis maris MCS10]
 gi|114340466|gb|ABI65746.1| thymidylate kinase [Maricaulis maris MCS10]
          Length = 211

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/196 (44%), Positives = 117/196 (59%), Gaps = 5/196 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT I  L   L  ++ DV VTREPGGTP AE  R +LL+  V+
Sbjct: 1   MKHGKFITLEGGEGAGKTTLIQGLTHALADRDIDVVVTREPGGTPGAELLRDLLLNGEVE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + +  EA++  AAR+DHVE  I+PAL  G  +LCDRF DS+ AYQG     +   L  L
Sbjct: 61  RWSSRTEALLMYAARVDHVERRIKPALSRGAWVLCDRFADSTRAYQGVAGGLEPAELADL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q  ++ +   D T+I+DL  +IGLKR     +L+    +  FE+ D   H + RQ FLDI
Sbjct: 121 QRFALGDFSADMTLIVDLDPEIGLKR-----TLQRGEKITRFEKFDTSYHRRLRQAFLDI 175

Query: 181 ARNQPDRCHIVDSAHS 196
           A   P+RC ++D   S
Sbjct: 176 ASEDPERCVVLDGTQS 191


>gi|312115143|ref|YP_004012739.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220272|gb|ADP71640.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100]
          Length = 249

 Score =  160 bits (405), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 126/246 (51%), Gaps = 36/246 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EGAGKTT   +L   L+RK  +V +TREPGGTP AEA R VLLS     FG
Sbjct: 3   GRFITLEGGEGAGKTTQAKVLAERLRRKGINVLLTREPGGTPRAEAIREVLLSGKAKRFG 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA++F AAR  H+E  IRPAL  G  ++CDRF DS+ AYQG         ++++ + 
Sbjct: 63  ALGEAVLFYAARESHLELGIRPALERGTWVICDRFSDSTRAYQGAAGGLPLSVIETIDKA 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY-------------------------------- 151
            V +  PD T+I DLP ++GLKR   R                                 
Sbjct: 123 VVGDTRPDLTLIFDLPPELGLKRAAERLRGGVVSAAVGGERAEPAAAAGGSPGAAAGSDV 182

Query: 152 ----SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
                L ++   D FE  ++  H   R  FL IA+ +PDRC +VD++ +   V   + +I
Sbjct: 183 IAPAPLVDAPASDRFETMNLTFHRSLRAEFLAIAKAEPDRCAVVDASDTPNRVEDKVWSI 242

Query: 208 VWELVQ 213
           V +  Q
Sbjct: 243 VRDRFQ 248


>gi|83588915|ref|YP_428924.1| thymidylate kinase [Moorella thermoacetica ATCC 39073]
 gi|83571829|gb|ABC18381.1| thymidylate kinase [Moorella thermoacetica ATCC 39073]
          Length = 207

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 122/214 (57%), Gaps = 16/214 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT +  L+ +L R+   V  TREPGGT  +EA R +LL     
Sbjct: 1   MGRGLFITLEGPDGSGKTTQMDRLEEYLHRRGLAVERTREPGGTLLSEAIRRLLLEPSYS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A AE  ++AAAR  HV   IRPAL  GKI+LCDRF DS+ AYQG         ++ L
Sbjct: 61  PVDARAELFLYAAARAQHVAERIRPALAAGKIVLCDRFSDSTLAYQGYGRQLGAELVERL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +++   + PD T ++D+PV IGL         R S   D  E++D+  H + RQ +LD+
Sbjct: 121 NDLATGNLRPDITFLIDVPVAIGLG--------RHSGGSDRLEQEDLEFHRRVRQGYLDL 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           AR +P R H++D   S         ++VWE +++
Sbjct: 173 ARREPRRVHLIDGTPS--------PDVVWEEIKE 198


>gi|51894393|ref|YP_077084.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863]
 gi|59798210|sp|Q67JB0|KTHY_SYMTH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|51858082|dbj|BAD42240.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863]
          Length = 214

 Score =  159 bits (403), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 7/211 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG++G+GK+T I LL ++L  ++     TREPGGTP AE  R VLL         
Sbjct: 3   VFISFEGVDGSGKSTQIRLLLQYLDEQSVPYVFTREPGGTPIAEQIRRVLLDPANRGMSV 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR +HV   IRPAL EGK+++CDRF+DSS  YQG        FL  + E++
Sbjct: 63  ITEALLFAAARAEHVSRTIRPALEEGKVVICDRFVDSSLVYQGVAGGLPVEFLTQINEMA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P  TI+LDL  ++ L R       R     D  ER+    H+  R+ +LD+AR +
Sbjct: 123 TGALRPHRTIVLDLAPEVALAR-------RTGEEADRIERQSREYHQLVREGYLDLARAE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P R  +VD++ S + V  +I  +V E++ +R
Sbjct: 176 PRRVKVVDASRSVEEVQKDIRRLVEEVLPRR 206


>gi|154248245|ref|YP_001419203.1| dTMP kinase [Xanthobacter autotrophicus Py2]
 gi|154162330|gb|ABS69546.1| dTMP kinase [Xanthobacter autotrophicus Py2]
          Length = 217

 Score =  157 bits (398), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/208 (43%), Positives = 120/208 (57%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T    L   L+   + V  TREPGG+P AEA RHVLLS   +
Sbjct: 1   MTQGRFITLEGGEGTGKSTQARRLAAHLRTLGHTVVETREPGGSPGAEAVRHVLLSGAAE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G  AEA++FAAAR DHV+ +IRPAL  G I++CDRF+DS+  YQG         LD+L
Sbjct: 61  PLGPVAEALLFAAARTDHVQTLIRPALAAGTIVICDRFIDSTRVYQGAVGQVAPPLLDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E++     PD T+ILD+P + GL R     + R +   D FE++    H   R+ F+  
Sbjct: 121 EEMATGGTRPDLTLILDVPPETGLARA----AARGNGDPDRFEKEGAAYHAAVREAFVAR 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P RC +VD+     +VA  I  IV
Sbjct: 177 AAAAPARCVLVDATPDPDAVAAQIAGIV 204


>gi|116050964|ref|YP_790211.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122260093|sp|Q02PC5|KTHY_PSEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|115586185|gb|ABJ12200.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 210

 Score =  157 bits (397), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+ G +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG       + + +L+ 
Sbjct: 62  AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLTEVQAGLDRLLPNLLER 207


>gi|296388546|ref|ZP_06878021.1| thymidylate kinase [Pseudomonas aeruginosa PAb1]
          Length = 210

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+ G +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG       + + +L+ 
Sbjct: 62  AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|91977186|ref|YP_569845.1| thymidylate kinase [Rhodopseudomonas palustris BisB5]
 gi|91683642|gb|ABE39944.1| thymidylate kinase [Rhodopseudomonas palustris BisB5]
          Length = 252

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/215 (45%), Positives = 132/215 (61%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G FI+FEG EG+GK+T I LL + L+  N    VTREPGG+P AE  RH+LL+ GV    
Sbjct: 13  GRFITFEGGEGSGKSTQIKLLAKRLEGANLRTLVTREPGGSPGAEIVRHLLLA-GVGRLI 71

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            GAEAEA++FAAAR DHV  +I+PAL  G  +LCDRF DS+  YQG         L++LQ
Sbjct: 72  GGAEAEALLFAAARDDHVRTLIQPALESGVWVLCDRFFDSTRVYQGRLGEVSPAMLNALQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++  + PD T+ILD+PV+IGL R   R   R S   D FE + +  H + R  +  IA
Sbjct: 132 DVTIGAMKPDLTVILDVPVEIGLARAAVR---RGSEAPDRFESESIDFHRRLRDAYRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +P+RC ++D+      VA  I    W  VQ+R+
Sbjct: 189 AAEPERCVVIDANAEPHVVAARI----WLTVQERL 219


>gi|86749796|ref|YP_486292.1| thymidylate kinase [Rhodopseudomonas palustris HaA2]
 gi|86572824|gb|ABD07381.1| thymidylate kinase [Rhodopseudomonas palustris HaA2]
          Length = 246

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/214 (45%), Positives = 137/214 (64%), Gaps = 8/214 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62
           G FI+FEG EGAGK+T I LL + L++   +  VTREPGG+P AE  RH+LL+  G    
Sbjct: 13  GHFITFEGGEGAGKSTQIRLLAQRLEKAGLETLVTREPGGSPGAEIIRHLLLAGVGRAIG 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GAEAEA++FAAAR DHV  +I+PAL  G  +LCDRF DS+  YQG         L++LQ+
Sbjct: 73  GAEAEALLFAAARDDHVRTLIQPALDRGVWVLCDRFYDSTRVYQGRLGDVSPGMLNALQD 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++  + PD T+ILD+PV+IGL R   R   R S   D FE +++  H + R  +  IAR
Sbjct: 133 VTIGTMKPDLTVILDVPVEIGLARAAVR---RGSDAPDRFESENIDFHRRLRDAYRQIAR 189

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +P+RC +VD AH+   V   + + +W  VQ+R+
Sbjct: 190 AEPERCVLVD-AHAEPKV---VADRIWLTVQERL 219


>gi|297717894|gb|ADI50090.1| thymidylate kinase [Candidatus Odyssella thessalonicensis L13]
          Length = 205

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 5/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++G FI+FEG EG GK+T   LL  +L+++ Y+V +TREPGGT  AE  R +L+S  V+
Sbjct: 1   MSAGKFITFEGGEGTGKSTQCQLLADYLRQQGYEVILTREPGGTDGAELIRALLVSGDVN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    EA++  AAR+DH E VI PAL  G  ++CDRF DS+ AYQG        FL +L
Sbjct: 61  RWSGVTEALLLNAARVDHWEKVISPALNRGAWVICDRFADSTIAYQGFGRGLDIDFLWNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +  V PD T + DL   IG+ R  +R   R S     FE+ D+  H + R  +L+I
Sbjct: 121 HNSVLPGVQPDLTFVFDLDPAIGINRALSR---RTSEV--RFEKMDIEFHNRMRHGYLEI 175

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
           A+N P RC +VD+     ++
Sbjct: 176 AKNHPQRCRLVDAGQDINTI 195


>gi|218960693|ref|YP_001740468.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans]
 gi|167729350|emb|CAO80261.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans]
          Length = 217

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 7/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+FEGIEG+GKTT I +L   L+ K      TREPGGT  +EA R +LL+    E
Sbjct: 12  SKGLFITFEGIEGSGKTTQIIMLVEVLKAKGIPYVTTREPGGTKISEAIRDLLLNPKFME 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E +++ A+R  H   +I PAL EGKI++ DR+ DS+YAYQG         ++ L 
Sbjct: 72  MKPETELLLYCASRAQHTAELILPALEEGKIVISDRYFDSTYAYQGAARELDEEVINVLT 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             S     PD T +LDLPV++GL R++NR        LD  E++ +  HEK R+ FL IA
Sbjct: 132 RFSTYGRNPDLTFLLDLPVEVGLARIKNR-------NLDRLEQETLSFHEKVRRQFLSIA 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  ++D     + +   IL+ +   +
Sbjct: 185 NKYPSRYIVLDGESQAEIIHRQILSTLQPFI 215


>gi|83858301|ref|ZP_00951823.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633]
 gi|83853124|gb|EAP90976.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633]
          Length = 211

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/208 (41%), Positives = 118/208 (56%), Gaps = 5/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT    L   L+ +     +TREPGGTP AEA R++L+    +
Sbjct: 1   MTQGRFITLEGGEGAGKTTLAKALSESLESQGVRTLITREPGGTPNAEALRNLLVEGDTE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A +E ++  AAR+DHVE +IRP+L +G  ++CDRF DS+ AYQG         +D +
Sbjct: 61  RWSALSETLLLYAARVDHVERLIRPSLDQGIWVICDRFSDSTRAYQGAAGGMSTAQIDEI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              S+    PD T ++DL  + GL+R + R    E A    FERK    H   R  FLDI
Sbjct: 121 DRASMHGFGPDLTFVVDLDPETGLERTRLRG---EGAT--RFERKPAAFHHALRVAFLDI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           AR  P+RC ++D A     VAT+   I+
Sbjct: 176 ARAAPERCVVLDGAMPADQVATSAFEIL 203


>gi|197105068|ref|YP_002130445.1| thymidylate kinase [Phenylobacterium zucineum HLK1]
 gi|196478488|gb|ACG78016.1| thymidylate kinase [Phenylobacterium zucineum HLK1]
          Length = 211

 Score =  155 bits (393), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T +  L   L+ +  +V  TREPGG+  AE+ R ++L+   D
Sbjct: 1   MARGRFITFEGGEGAGKSTQVKRLAARLEAQGLEVVTTREPGGSAGAESIRALVLNGEAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E ++  AAR DH+E VIRPAL  G  ++CDRF DS+ AYQG    +    + +L
Sbjct: 61  RWSPVTETLLMYAARRDHIERVIRPALARGAWVICDRFADSTRAYQGAAGGTDPALIAAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +++V PD T++ DLP ++GL+R   R     +     FE K +  H++ R+ F  I
Sbjct: 121 EAHILEDVRPDLTLVFDLPPEVGLERAHAR-----AGAEMRFESKGMAFHQRLREGFRAI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A  +P RC ++D+     +V       VW  V +R++
Sbjct: 176 AAAEPQRCAVIDATAPMDAVE----GAVWTAVSERLA 208


>gi|330878246|gb|EGH12395.1| thymidylate kinase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 210

 Score =  155 bits (392), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAGVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A S   V  ++  ++ EL++
Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206


>gi|148265181|ref|YP_001231887.1| dTMP kinase [Geobacter uraniireducens Rf4]
 gi|189028834|sp|A5G696|KTHY_GEOUR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146398681|gb|ABQ27314.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 213

 Score =  155 bits (392), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 118/206 (57%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG+EG GKTT I LL + L  + + V VTREPGG P A+ AR +LL        
Sbjct: 2   GCFITFEGVEGCGKTTQIKLLAQHLTEQGHTVIVTREPGGCPIADQARAILLDADNRAMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR  HV+ +++PAL   K++LCDRF D++ AYQG         +  L ++
Sbjct: 62  PTTELLLYAAARAQHVQEIVKPALAANKVVLCDRFTDATIAYQGYGRGLDPATIAYLNDL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + P  T++LD PV++GLKR  +R +    A  + FE + V+ H K R  +L +A +
Sbjct: 122 ATDGLKPRLTVLLDCPVEVGLKRAFDRINGAAGAREERFELESVLFHRKVRDGYLKLAED 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
           +P+R  I+D +   Q     I   V 
Sbjct: 182 EPERFIIIDGSQGVQETEAAITAAVL 207


>gi|310816869|ref|YP_003964833.1| thymidylate kinase [Ketogulonicigenium vulgare Y25]
 gi|308755604|gb|ADO43533.1| thymidylate kinase [Ketogulonicigenium vulgare Y25]
          Length = 205

 Score =  155 bits (391), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 10/208 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFISFEGI+G+GK+T   +L   L+ + +DV +TREPGG+P AE  R ++L+   D
Sbjct: 1   MTCGLFISFEGIDGSGKSTQARVLADALRGRGHDVVLTREPGGSPGAEEIRRLVLTGATD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  I PAL  G+I++ DRF DS+ AYQG         +D+L
Sbjct: 61  RWSAETETLLFTAARRDHLEKTILPALAAGQIVITDRFADSTRAYQGATRGDLRGIVDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS--LRESACLDYFERKDVMIHEKRRQIFL 178
             + +    PD T ++D      L R   R +  LR       FE   + + +K R ++L
Sbjct: 121 HALMIGR-EPDLTFVIDADPAASLTRGLARSTDELR-------FEEFGLPLQQKMRAVYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILN 206
           DIA  QP RC ++D A +  +VA  IL 
Sbjct: 173 DIAHAQPQRCIVIDGAGTIDAVAARILT 200


>gi|313885558|ref|ZP_07819308.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619288|gb|EFR30727.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 212

 Score =  154 bits (390), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 125/206 (60%), Gaps = 4/206 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFIS EG +G+GK++ I  L   L +  +D+ +TREPGG+P AE  R V+L       
Sbjct: 4   NGLFISIEGPDGSGKSSAIQGLATRLSQDGFDLVLTREPGGSPIAEQIRQVILDVNNTAM 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  H+++ I PAL  GK+++ DRF+DSS AYQG   +     + ++ +
Sbjct: 64  DPMTEALLYAAGRRQHLKDTILPALAAGKVVISDRFVDSSLAYQGVGRNLSQTDIWNINQ 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++Q  +PD T++LD+P ++GLKR+   Y  R     D  +++D+  H K RQ FLD+A 
Sbjct: 124 YAIQGHLPDITLLLDVPAEVGLKRI---YQARNQRQFDRLDQEDLSFHNKVRQAFLDLAA 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +Q DR H++D+  +   V  +   ++
Sbjct: 181 DQ-DRIHVIDARQAVDQVVEDAFQVL 205


>gi|28870981|ref|NP_793600.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|38257966|sp|Q87YH1|KTHY_PSESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28854230|gb|AAO57295.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331019150|gb|EGH99206.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 210

 Score =  154 bits (390), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A S   V  ++  ++ EL++
Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206


>gi|330962619|gb|EGH62879.1| thymidylate kinase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 210

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAARLRAQGVEVLLTREPGGTPLAERVRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ AR
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRTTYLNRAR 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD++ +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDASQTLAQVQASLDTLLPQLLE 206


>gi|78223521|ref|YP_385268.1| thymidylate kinase [Geobacter metallireducens GS-15]
 gi|78194776|gb|ABB32543.1| thymidylate kinase [Geobacter metallireducens GS-15]
          Length = 217

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 112/195 (57%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GK+T + L+   L R  + V VTREPGG P A+A R +LL        
Sbjct: 2   GFFITFEGIEGCGKSTQVRLVAERLSRAGHGVVVTREPGGCPIADAIRAILLDARNSAMV 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV  VI PAL  GKI+LCDRF DS+ AYQG         +  L  +
Sbjct: 62  PMAELLLYAAARAQHVAEVIEPALAAGKIVLCDRFTDSTMAYQGFGRKLDRELIAQLNSL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + PD T++LD  V+ GL R   R +   +A  + FE++ ++ HE+ R  FL +A  
Sbjct: 122 AAGSIRPDLTLLLDCSVETGLARAMARINTSSAAREERFEQESILFHERIRDGFLSLAAA 181

Query: 184 QPDRCHIVDSAHSFQ 198
           +P R  ++D +   +
Sbjct: 182 EPGRFVVLDGSGGIE 196


>gi|83949598|ref|ZP_00958331.1| thymidylate kinase [Roseovarius nubinhibens ISM]
 gi|83837497|gb|EAP76793.1| thymidylate kinase [Roseovarius nubinhibens ISM]
          Length = 210

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G+FISFEGI+G+GK+T +  L   LQ +   V +TREPGG+P AE  R ++L    D 
Sbjct: 5   RAGVFISFEGIDGSGKSTQVRRLADHLQARGLRVRLTREPGGSPGAEDIRKLVLEGAGDR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  E E ++F AAR DH+E VI PAL  G++++CDRF DS+  YQG   +     +D L 
Sbjct: 65  WSPETEILLFTAARRDHMERVILPALAAGEVVICDRFADSTRMYQGLASAEMRALVDQLH 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ +    PD T+++D+  ++GL R   R    E      FE + +    + R  FLD+A
Sbjct: 125 DLMIGR-EPDLTLLIDMDPEVGLARALARQGGEE-----RFEGRGIEWQRRMRAGFLDLA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              PDR  +VD A    +VA  I  + 
Sbjct: 179 EAHPDRIRVVDGAGEIDAVAGQIATLT 205


>gi|77919289|ref|YP_357104.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380]
 gi|123574092|sp|Q3A3X3|KTHY_PELCD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77545372|gb|ABA88934.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380]
          Length = 216

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/200 (41%), Positives = 115/200 (57%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FIS EGIEG+GKTT I  L   L+   + V +TREPGG P A+  R +LL         
Sbjct: 3   FFISLEGIEGSGKTTQIKRLADRLESLGHAVLITREPGGCPIADQIRQILLHPDNGHLDP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE +++AAAR  HV  VIRPAL +GKI+LCDR+ D++ AYQG         +  L E++
Sbjct: 63  KAELLLYAAARAQHVAEVIRPALDQGKIVLCDRYCDATLAYQGYARGLDLPMVKQLNELA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                P  T++LD+P D GL R ++R +L        FE++ +  H K RQ +LD+AR +
Sbjct: 123 AGNCRPHLTLLLDMPHDRGLLRARSRNALGAGPEEGRFEQESLAFHNKVRQGYLDLARQE 182

Query: 185 PDRCHIVDSAHSFQSVATNI 204
           P R  +VD+  +   V   I
Sbjct: 183 PQRIKVVDANGTLDEVCHRI 202


>gi|237800352|ref|ZP_04588813.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023209|gb|EGI03266.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 210

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSEESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIATLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLAEVQASLDTLLPQLLE 206


>gi|325295138|ref|YP_004281652.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065586|gb|ADY73593.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 206

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 7/204 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T   LL  +  +K  +  +TREPGGTPAAE  R+ +L    + F A
Sbjct: 1   MFITFEGIEGCGKSTQAKLLYDWFLKKGKEAILTREPGGTPAAEEIRNFILRPRKETFPA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ AAR  HVEN+I+PAL +G  ++CDRF+DS+ AYQG         ++ L E +
Sbjct: 61  FAELCLYMAARGFHVENLIKPALKKGIWVVCDRFVDSTVAYQGYGRGINVELIEKLNEEA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T ++D+PV+IG  R++ R        LD  E++++  HE+ RQ FL IA   
Sbjct: 121 TGNLKPDLTFLIDVPVEIGFSRIKRR-------DLDRMEQEEMDFHERVRQGFLRIAEKN 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            +R  ++D       +   ILN +
Sbjct: 174 SERVIVIDGTKKVDEIFDEILNTL 197


>gi|49078908|gb|AAT49833.1| PA2962 [synthetic construct]
          Length = 211

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L+ 
Sbjct: 62  AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|15598158|ref|NP_251652.1| thymidylate kinase [Pseudomonas aeruginosa PAO1]
 gi|107102512|ref|ZP_01366430.1| hypothetical protein PaerPA_01003575 [Pseudomonas aeruginosa PACS2]
 gi|218890840|ref|YP_002439704.1| thymidylate kinase [Pseudomonas aeruginosa LESB58]
 gi|254235937|ref|ZP_04929260.1| thymidylate kinase [Pseudomonas aeruginosa C3719]
 gi|313108146|ref|ZP_07794281.1| thymidylate kinase [Pseudomonas aeruginosa 39016]
 gi|14285514|sp|Q9HZN8|KTHY_PSEAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732662|sp|B7V167|KTHY_PSEA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|9949060|gb|AAG06350.1|AE004722_6 thymidylate kinase [Pseudomonas aeruginosa PAO1]
 gi|126167868|gb|EAZ53379.1| thymidylate kinase [Pseudomonas aeruginosa C3719]
 gi|218771063|emb|CAW26828.1| thymidylate kinase [Pseudomonas aeruginosa LESB58]
 gi|310880783|gb|EFQ39377.1| thymidylate kinase [Pseudomonas aeruginosa 39016]
          Length = 210

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L+ 
Sbjct: 62  AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|167032505|ref|YP_001667736.1| thymidylate kinase [Pseudomonas putida GB-1]
 gi|189030837|sp|B0KF60|KTHY_PSEPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166858993|gb|ABY97400.1| dTMP kinase [Pseudomonas putida GB-1]
          Length = 210

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAERVRELLLAPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A+
Sbjct: 122 FVQGGLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+A S ++V  +I  ++  +V++
Sbjct: 176 RAPQRYSLLDAAQSLEAVQRDIDALLPGIVER 207


>gi|281356872|ref|ZP_06243362.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548]
 gi|281316430|gb|EFB00454.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548]
          Length = 219

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 3/213 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVD 60
           + G  I+FEG EGAGK+T + LL  +L+ K ++V  TREPGGTP AE  R V+ +  G +
Sbjct: 9   HPGRLITFEGPEGAGKSTQLKLLAGYLEEKGFEVIATREPGGTPLAERLRAVIKAFEGEE 68

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++  AAR  HV  VIRPAL  GKI+LCDR+ DS+ AYQG         +D+L
Sbjct: 69  KLHNTTELLLIEAARSQHVREVIRPALAAGKIVLCDRYFDSTTAYQGGARGFDAEAIDAL 128

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++++ E  PD T++ DL  + G  R + R   +     D FE + +  H + R+ +L I
Sbjct: 129 NDLAIAECAPDLTLLFDLTPEAGFARTRTRTETQGEH--DRFEEEKLEFHRQVRESYLTI 186

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A  +P+R  +V +    Q + T +  +V EL++
Sbjct: 187 AAREPERVRVVAADRPAQEIQTEVRKLVDELIR 219


>gi|302187273|ref|ZP_07263946.1| thymidylate kinase [Pseudomonas syringae pv. syringae 642]
          Length = 210

 Score =  153 bits (386), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206


>gi|152985503|ref|YP_001347571.1| thymidylate kinase [Pseudomonas aeruginosa PA7]
 gi|166223103|sp|A6V3D6|KTHY_PSEA7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150960661|gb|ABR82686.1| thymidylate kinase [Pseudomonas aeruginosa PA7]
          Length = 210

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGVEVQLTREPGGTPLAERIRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L+ 
Sbjct: 62  AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPQRYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|66044897|ref|YP_234738.1| thymidylate kinase [Pseudomonas syringae pv. syringae B728a]
 gi|75502746|sp|Q4ZVX2|KTHY_PSEU2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|63255604|gb|AAY36700.1| Thymidylate kinase [Pseudomonas syringae pv. syringae B728a]
          Length = 210

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ AR
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V   +  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206


>gi|90415870|ref|ZP_01223803.1| thymidylate kinase [marine gamma proteobacterium HTCC2207]
 gi|90332244|gb|EAS47441.1| thymidylate kinase [marine gamma proteobacterium HTCC2207]
          Length = 208

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 123/215 (57%), Gaps = 15/215 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GKTT+I  ++ ++  K      TREPGGTP AE  R +LL+   +   
Sbjct: 3   GKFITIEGTEGVGKTTNIKFIQDWMDSKKLTYGCTREPGGTPLAEQVRELLLAPREESVC 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-- 121
             AE ++  AAR  H+  VI P L EG  +LCDRF D++YAYQG   + +H+  D ++  
Sbjct: 63  NTAELLMVFAARAQHLNQVIEPMLGEGAWVLCDRFTDATYAYQG---AGRHMRDDLIRDL 119

Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E+ VQ  + PD T+ILD+PV IGL R   R      +  D FE++ V   E+ R  +L I
Sbjct: 120 ELMVQGSLQPDLTLILDIPVQIGLARASER------STPDRFEQEQVAFFERVRNRYLQI 173

Query: 181 ARNQPDRCHIVDSAHSFQSVA---TNILNIVWELV 212
           A++ P RC ++D++ + + V    T  L   WE V
Sbjct: 174 AQDNPQRCVVIDASLTLEGVQAQITQTLETFWETV 208


>gi|330952693|gb|EGH52953.1| thymidylate kinase [Pseudomonas syringae Cit 7]
          Length = 210

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGIQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206


>gi|218289082|ref|ZP_03493319.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240907|gb|EED08085.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
          Length = 213

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 3/214 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I+FEGI+GAGKTT +  L  +L+ +   V VTREPGGT   +A R +LL     
Sbjct: 1   MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HVE +IRPAL  G+I+LCDRF+D+S AYQG        ++++L
Sbjct: 61  EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++  + PD T+  DL       R++ R    E   LD  ER+D    E+    F  +
Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARV---EGGGLDRIERRDEAFFERVADAFERL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R  P+    +D+A S   +   I  +VW L+Q+
Sbjct: 178 WRAMPEVRKRIDAARSPDDIEQEIRALVWNLIQQ 211


>gi|222055245|ref|YP_002537607.1| dTMP kinase [Geobacter sp. FRC-32]
 gi|254808294|sp|B9M910|KTHY_GEOSF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221564534|gb|ACM20506.1| dTMP kinase [Geobacter sp. FRC-32]
          Length = 214

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 117/195 (60%), Gaps = 7/195 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT I LL++ L  K + V +TREPGG P A+  R +LL        
Sbjct: 2   GCFITFEGIEGCGKTTQIKLLEQHLAEKGFKVLLTREPGGCPIADQIRAILLDAANSAMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120
             AE +++AAAR  HVE VI+PAL +  I+LCDRF D++ AYQG     + L LDS   L
Sbjct: 62  PSAELLLYAAARAQHVEEVIKPALADDCIVLCDRFTDATVAYQG---YGRGLDLDSIGYL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVMIHEKRRQIFLD 179
            +++   + P  TI+LD PV++GLKR   R + +   A  + FE +  + H+K R  +L 
Sbjct: 119 NQLATSGLKPQLTILLDCPVEVGLKRALARINGISAGAREERFELESTLFHQKVRNGYLK 178

Query: 180 IARNQPDRCHIVDSA 194
           +A N+  R  IVD  
Sbjct: 179 LAENEKGRFLIVDGG 193


>gi|258510140|ref|YP_003183574.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476866|gb|ACV57185.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 213

 Score =  152 bits (384), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 3/214 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I+FEGI+GAGKTT +  L  +L+ +   V VTREPGGT   +A R +LL     
Sbjct: 1   MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HVE +IRPAL  G+I+LCDRF+D+S AYQG        ++++L
Sbjct: 61  EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++  + PD T+  DL       R++ R    E   LD  ER+D    E+    F  +
Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARA---EGGGLDRIERRDEAFFERVADAFERL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R  P+    +D+A S   +   I  +VW L+Q+
Sbjct: 178 WRAAPEVRKRIDAARSPDDIEQEIRALVWNLIQQ 211


>gi|330973853|gb|EGH73919.1| thymidylate kinase [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 210

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELMLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ AR
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V   +  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206


>gi|330966243|gb|EGH66503.1| thymidylate kinase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 210

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VI PAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVICPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P+R  +VD+A S   V  ++  ++ EL++
Sbjct: 176 AEPERYRLVDAAQSLADVQASLDKLLPELLE 206


>gi|167768112|ref|ZP_02440165.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1]
 gi|317499447|ref|ZP_07957714.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709636|gb|EDS20215.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1]
 gi|291559963|emb|CBL38763.1| thymidylate kinase [butyrate-producing bacterium SSC/2]
 gi|316893319|gb|EFV15534.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 208

 Score =  152 bits (383), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG +GAGKTT I LL+ +L  K YD+ V REPGGTP +EA R+V+L+    E G
Sbjct: 2   GLFLTVEGPDGAGKTTQIELLRDYLSDKGYDIIVCREPGGTPISEAVRNVILNKEFTEMG 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR   +E VIRPAL +GKI++CDRF++SS  YQG         +  + + 
Sbjct: 62  HMTELLLYAAARAQLIEEVIRPALEDGKIVICDRFVESSAVYQGIARGMGIDLVYKVNQF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ + MPD TI++DL  + G+ R       ++ A LD  E + +  H+K  + +  +A  
Sbjct: 122 AIGDTMPDLTIMIDLDAEAGISRK------KKQAELDRMESETIDFHKKVVEGYRQLASL 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            PDR + VD + + + +   I++ V
Sbjct: 176 HPDRIYTVDGSLTIEEIHQKIVSQV 200


>gi|288958657|ref|YP_003448998.1| dTMP kinase [Azospirillum sp. B510]
 gi|288910965|dbj|BAI72454.1| dTMP kinase [Azospirillum sp. B510]
          Length = 229

 Score =  152 bits (383), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 123/218 (56%), Gaps = 13/218 (5%)

Query: 4   GLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           G  I+ EG EGAGK+T +      L+  L+ +   +  TREPGG+P AE  R +L++   
Sbjct: 11  GRLITLEGGEGAGKSTQLRRLAGRLRETLRARGAGLVTTREPGGSPGAEEIRALLVTGET 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             +    EA++ +AAR DH+E  + PAL  G  +LCDRFLDS+ AYQG         +++
Sbjct: 71  GRWSPVTEALLHSAARRDHLERTVWPALETGDWVLCDRFLDSTMAYQGYGLGLGRALVET 130

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +Q  ++ +  PD T+ILD+ V+ GL+R   R+        D +ER D+  H++ R  FLD
Sbjct: 131 VQRAALGDFRPDLTLILDIEVEKGLRRAVARH-----GGEDRYERMDIGFHQRLRDGFLD 185

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           IAR +PDRC +VD+     +V       VW+ V  R+ 
Sbjct: 186 IARREPDRCAVVDADADPDTVQAR----VWDAVSGRLG 219


>gi|313499927|gb|ADR61293.1| Tmk [Pseudomonas putida BIRD-1]
          Length = 210

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + P R  ++D+A S ++V  +I  ++  ++++
Sbjct: 176 SAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207


>gi|148549001|ref|YP_001269103.1| thymidylate kinase [Pseudomonas putida F1]
 gi|166223106|sp|A5W709|KTHY_PSEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148513059|gb|ABQ79919.1| thymidylate kinase [Pseudomonas putida F1]
          Length = 210

 Score =  151 bits (382), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+A S ++V  +I  ++  ++++
Sbjct: 176 GAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207


>gi|163746821|ref|ZP_02154178.1| thymidylate kinase [Oceanibulbus indolifex HEL-45]
 gi|161379935|gb|EDQ04347.1| thymidylate kinase [Oceanibulbus indolifex HEL-45]
          Length = 214

 Score =  151 bits (381), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 120/206 (58%), Gaps = 6/206 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLF++FEGI+G+GK+T   LL   L  + +DV +TREPGG+P AE  R ++L    D +
Sbjct: 10  SGLFVTFEGIDGSGKSTQARLLADHLTAQGHDVVLTREPGGSPGAEEIRALVLQGDPDRW 69

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++F AAR DH+E  IRPAL  GKI++CDRF DS+  YQG         +D L  
Sbjct: 70  SAQTEILLFTAARRDHLERTIRPALDAGKIVICDRFADSTRMYQGLSRGDLRQMVDDLHA 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +  V PD T+++D+    GL+R  +R +  E      FE   V +  + R  FL++A+
Sbjct: 130 LMIG-VEPDLTVLIDMDPANGLERALSRQTAEE-----RFEDFGVELQAQMRAGFLNLAK 183

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
              DR H++D      +VA ++   V
Sbjct: 184 EFSDRFHVIDGGREIDTVARDVTATV 209


>gi|256822417|ref|YP_003146380.1| thymidylate kinase [Kangiella koreensis DSM 16069]
 gi|256795956|gb|ACV26612.1| thymidylate kinase [Kangiella koreensis DSM 16069]
          Length = 216

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/217 (40%), Positives = 132/217 (60%), Gaps = 12/217 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GK+T+I+ +K + + KN  +  TREPGGTP AE  R +LLS   ++  
Sbjct: 7   GKFITIEGTEGVGKSTNIAFIKAWFEAKNISLLHTREPGGTPFAEEIRELLLSQREEQVD 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A++E ++  AAR  HV   I+PAL + + +LCDRF D+S+AYQG   + + L L+ L E+
Sbjct: 67  AKSELLLMYAARAQHVSQKIKPALEQRQWVLCDRFSDASFAYQG---AGRALGLNKLSEL 123

Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               ++   PD TI+LDLPV++GL R Q R        +D FE + V   E+ RQ +L I
Sbjct: 124 DQWVLEGFKPDLTILLDLPVEVGLSRAQER------GPIDRFEEEKVEFFEQVRQGYLQI 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A+ +P+R  IVD+  S + V   I  ++    Q++V+
Sbjct: 178 AQQEPERMKIVDARGSLEKVQQQIEQVLIHFYQQQVT 214


>gi|292493122|ref|YP_003528561.1| thymidylate kinase [Nitrosococcus halophilus Nc4]
 gi|291581717|gb|ADE16174.1| thymidylate kinase [Nitrosococcus halophilus Nc4]
          Length = 213

 Score =  151 bits (381), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 124/213 (58%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FIS EGIEGAGK+T +  +++ L+     V VTREPGGTP  E  R +LL+  ++
Sbjct: 1   MGRGCFISVEGIEGAGKSTQLKFIQQLLESAGKAVTVTREPGGTPLGEQIRTLLLTPRLE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AE E ++  AAR++HV  VI PAL  G+ +LCDRF  +SYAYQG         +++L
Sbjct: 61  GMSAETELLLMFAARVEHVRQVISPALARGRWVLCDRFTGASYAYQGGGRGLPLARIEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  ++  + PD T++LD+PV +GL+R  +R   R+    D FE++     E  R+ +L +
Sbjct: 121 EHWALNHLRPDLTLLLDVPVGVGLQRAASR---RQQP--DRFEQEQAGFFECVRKAYLSL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A+ + D   ++D++     V   I  ++   ++
Sbjct: 176 AKERVDEFRLIDASMPLPEVQEAIQQVIMAFIE 208


>gi|149184555|ref|ZP_01862873.1| thymidylate kinase [Erythrobacter sp. SD-21]
 gi|148831875|gb|EDL50308.1| thymidylate kinase [Erythrobacter sp. SD-21]
          Length = 209

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG GK+T   LL+  L+++  +V +TREPGGTP AEA R +LL    +
Sbjct: 1   MRKGKFIAFEGGEGMGKSTQARLLRDALEQRGIEVELTREPGGTPGAEAIREMLLHPPGE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +GA+AEA++FAAAR DHV  +IRPA+  G+ ++CDRFLDSS AYQG         +  L
Sbjct: 61  GWGAQAEALLFAAARADHVARLIRPAVEAGRWVVCDRFLDSSRAYQGSAGELGDEQVRKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            EI    ++PD TI++    D     V  R   R+    D    +D   H    + F   
Sbjct: 121 HEIGTGGLLPDLTIVIGAHSD----EVSARLRARDGDTSDAIGGRDETYHRSVNKAFERF 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +P+R   +D + S + V   I+  +  L+
Sbjct: 177 AEEEPNRFARIDGSGSIEDVHVRIMTALAGLL 208


>gi|327481307|gb|AEA84617.1| thymidylate kinase [Pseudomonas stutzeri DSM 4166]
          Length = 210

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +   
Sbjct: 3   GLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPMA 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG     + L L+ + ++
Sbjct: 63  VDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQG---GGRGLSLERIAQL 119

Query: 124 SV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                 ++ PD T+I DLPVD+GL R   R        LD FE++ +   E  R  +L  
Sbjct: 120 ETFVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQR 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A+  P R  ++D+  +  +V  ++  ++ EL+
Sbjct: 174 AKAAPSRYRVIDAGQALNAVQCDVEALIPELL 205


>gi|110833935|ref|YP_692794.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2]
 gi|123050570|sp|Q0VQM6|KTHY_ALCBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110647046|emb|CAL16522.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2]
          Length = 208

 Score =  150 bits (380), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 6/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG EGAGK++++  L   L+ +   V V+REPGGT  AE+ R VLL+   +  
Sbjct: 2   SGRFITLEGGEGAGKSSNLVWLAEALRAEGKTVMVSREPGGTALAESIREVLLAPSNEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+E  IRPAL  G+ +LCDRFLD+++AYQG         + +L+ 
Sbjct: 62  ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFLDATWAYQGAGRGLDSAAIAALEA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +++  PD TI+ D+PV++G+ R   R      A LD  E++D    ++ RQ +L  A 
Sbjct: 122 LVIRDTRPDMTILFDVPVEVGMARAGKR------AALDRIEQEDRAFFDRIRQCYLARAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +P+R   VD++   +SV   +  IV E+
Sbjct: 176 QEPNRFRTVDASQPLESVQQQLARIVEEM 204


>gi|260434141|ref|ZP_05788112.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417969|gb|EEX11228.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 210

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 6/211 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F++FEGI+G+GK+T   +L   L+   ++V +TREPGG+P AE  R ++L    D + 
Sbjct: 5   GMFLTFEGIDGSGKSTQARMLAEHLRLSGHEVVLTREPGGSPGAEEIRRLVLEGDPDRWS 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL EGKI++CDRF DS+  YQG         +D L ++
Sbjct: 65  AETEILLFTAARRDHLERTIEPALAEGKIVICDRFADSTRMYQGLSRGDLRAIVDQLHQL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            ++   PD T+++D+  + GL R + R+   E      FE     +  + R+ FL++A  
Sbjct: 125 MIRRE-PDLTLLIDMDPETGLARAKGRHGGEER-----FEDFGPDLQRRMRKGFLELAEE 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P+R  ++D      SV+ ++  I  + +Q+
Sbjct: 179 FPERFRVIDGNRDMDSVSRDVTQIALQALQQ 209


>gi|330502601|ref|YP_004379470.1| thymidylate kinase [Pseudomonas mendocina NK-01]
 gi|328916887|gb|AEB57718.1| thymidylate kinase [Pseudomonas mendocina NK-01]
          Length = 210

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL    +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLRERGIDVLLTREPGGTPLAERIRELLLEPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H++ VIRPAL  G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLQQVIRPALANGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T+I DLPV+IGL R   R        LD FE++     E  RQ +L  A 
Sbjct: 122 FVQGELRPDLTLIFDLPVEIGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P R  ++D+  +   V  +I  ++  L++
Sbjct: 176 QAPQRYRVLDAGQTLAQVQADIDALLPSLLE 206


>gi|84499967|ref|ZP_00998233.1| thymidylate kinase [Oceanicola batsensis HTCC2597]
 gi|84391901|gb|EAQ04169.1| thymidylate kinase [Oceanicola batsensis HTCC2597]
          Length = 217

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 6/203 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+SFEGI+G+GK+T   +L   L+ +  DV +TREPGG+P AE  R ++L    D + 
Sbjct: 9   GLFLSFEGIDGSGKSTQARMLAEALRAEGRDVVLTREPGGSPGAEEIRALVLQGDPDRWS 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E ++F AAR DH+E  IRPAL  G +++CDRF DS+  YQG         +D L  +
Sbjct: 69  AATEILLFTAARRDHLERTIRPALDRGAVVICDRFADSTRMYQGLSRGDLRRTVDDLHAL 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  + PD T+++D+  ++GL R + R  + E      FE     +  + R  FLD+AR 
Sbjct: 129 MIG-IEPDLTLLIDMDPEVGLSRAKGRQGIEE-----RFEDFGAGLQARMRTGFLDLARE 182

Query: 184 QPDRCHIVDSAHSFQSVATNILN 206
            P R  ++D A    +VA ++L 
Sbjct: 183 FPARFRVIDGARPEGTVAADVLT 205


>gi|289671976|ref|ZP_06492866.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5]
          Length = 210

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+  +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAGQTLADVQDSLDTLLPQLLE 206


>gi|330901144|gb|EGH32563.1| thymidylate kinase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 210

 Score =  150 bits (379), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+  +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAGQTLADVQASLDTLLPQLLE 206


>gi|319789392|ref|YP_004151025.1| thymidylate kinase [Thermovibrio ammonificans HB-1]
 gi|317113894|gb|ADU96384.1| thymidylate kinase [Thermovibrio ammonificans HB-1]
          Length = 206

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 7/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T   L   +L  + Y   +TREPGGTPAAE  R VLL    + F  
Sbjct: 1   MFITFEGIEGCGKSTQARLTYEWLLDRGYTSVLTREPGGTPAAEKVREVLLKRWEERFPP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ AAR  HVEN+I+PAL EG I++CDRF DS+ AYQ         F+  L   +
Sbjct: 61  MAELFLYEAARAFHVENLIKPALQEGSIVICDRFTDSTLAYQSFGRGLSREFVALLNRKA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T+++DLPV+   +R+  +         D  E + +  H + R+ FL IAR +
Sbjct: 121 TGGLKPDLTLLIDLPVEEAFRRIAQKSR-------DRMESEPLEFHRRVREGFLSIAREE 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P+R  ++D   +   V   +  ++ E
Sbjct: 174 PERVAVIDGRGTVSEVFERVKRVIEE 199


>gi|298291754|ref|YP_003693693.1| thymidylate kinase [Starkeya novella DSM 506]
 gi|296928265|gb|ADH89074.1| thymidylate kinase [Starkeya novella DSM 506]
          Length = 243

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 8/213 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T +  L+  L     +   TREPGG+  AE  RH++LS      G
Sbjct: 28  GRFITFEGGEGAGKSTQVRRLREKLAELGIEAVATREPGGSTGAEIMRHLILSGAAKPLG 87

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA +FAAAR DH++  IRPAL  G  ++CDRF DS+ AYQG   +     + +L+E+
Sbjct: 88  PLAEAALFAAARADHLDATIRPALARGAWVVCDRFADSTRAYQGVLGNIDPRLIAALEEV 147

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V +  PD T+ILD+P + GL    +R S R     D FE + V  H + R+ F  +A N
Sbjct: 148 TVGDTRPDLTLILDIPAEEGL----SRASARSGVAADRFESEGVGFHRRLREAFRALAEN 203

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +P RC ++D+     +VA  I    W  VQ+R+
Sbjct: 204 EPQRCVLIDARPDADTVAEAI----WTAVQERL 232


>gi|30250115|ref|NP_842185.1| thymidylate kinase [Nitrosomonas europaea ATCC 19718]
 gi|46576512|sp|Q82SW5|KTHY_NITEU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|30139222|emb|CAD86092.1| Thymidylate kinase [Nitrosomonas europaea ATCC 19718]
          Length = 215

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 7/208 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EGI+GAGK+TH++ L+RFLQ K  +V VTREPGGT   EA R +LL     
Sbjct: 1   MQRGKFITVEGIDGAGKSTHLAWLERFLQDKGLEVVVTREPGGTALGEALRQLLLDH-RQ 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E EA++  AAR +H++ VI PAL  G  ++ DRF D+S+AYQG         LD+L
Sbjct: 60  AMHPETEALLMFAARREHLDKVILPALDRGAWVVSDRFTDASFAYQGGGRGVAQSKLDNL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++    E+ PD T+  D+PV +G +R+Q+      +   D FE +  +  E+ RQ +L  
Sbjct: 120 EQWVQAELSPDLTVYFDVPVIVGRERLQS------TRVADRFEMESNLFFERVRQAYLQR 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R  +VD +     V T +  IV
Sbjct: 174 AEQFPQRIRVVDGSRLLAEVKTAVAEIV 201


>gi|300023248|ref|YP_003755859.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525069|gb|ADJ23538.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 209

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 12/212 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG GK+T    L   L+R    V +TREPGGTP  E  R +++     
Sbjct: 1   MKRGKFITFEGGEGVGKSTQAKRLAERLERAGVPVIITREPGGTPVGEDVRDLIMKDRPT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FAAAR +HV +VIRPAL +G  ++ DRF+DS+  YQG+R   +   +  L
Sbjct: 61  D--PMTELLLFAAARAEHVTSVIRPALDDGTWVISDRFIDSTRVYQGKRYGLEPELISLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  +V    PD T+ILDLP   G++R QNR        L  ++ + +  HE  R+ FL+I
Sbjct: 119 ERYTVSPDFPDLTLILDLPATEGVERAQNR------GTLSRYDAERIETHEVLRKGFLEI 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A ++P RC ++D++    SV T     VW+ V
Sbjct: 173 ATSEPKRCVLIDASLPVSSVETA----VWQAV 200


>gi|146282956|ref|YP_001173109.1| thymidylate kinase [Pseudomonas stutzeri A1501]
 gi|166223107|sp|A4VMR6|KTHY_PSEU5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145571161|gb|ABP80267.1| thymidylate kinase [Pseudomonas stutzeri A1501]
          Length = 210

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 12/212 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +   
Sbjct: 3   GLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPMA 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG     + L L+ + ++
Sbjct: 63  VDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQG---GGRGLSLERIAQL 119

Query: 124 SV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                 ++ PD T+I DLPVD+GL R   R        LD FE++ +   E  R  +L  
Sbjct: 120 ETFVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQR 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P R  ++D+  +  +V  ++  ++ EL+
Sbjct: 174 AEAAPSRYRVIDAGQALNAVQCDVEALIPELL 205


>gi|330722496|gb|EGH00323.1| Thymidylate kinase [gamma proteobacterium IMCC2047]
          Length = 216

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 123/203 (60%), Gaps = 6/203 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G+FI+ EGIEG GKTT+++ ++++LQ    D+ VTREPGGTP AE  R +LL+   + 
Sbjct: 4   QAGVFITVEGIEGVGKTTNMAFIQQYLQALGVDLTVTREPGGTPLAEEIRGLLLNNRDEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR  H+  +I+P L +G  +L DRF D++YAYQG         + +L+
Sbjct: 64  LNNDAELLLVFAARAQHLGQLIKPTLAQGGWVLSDRFTDATYAYQGGGRELSMEMIANLE 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++   ++ P+ T++LD+PV++GL R   R        LD FER+     EK R  +L  A
Sbjct: 124 QMVQGDLRPNLTLLLDVPVEVGLSRAGQR------GELDRFEREKQAFFEKVRHTYLQRA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           + +P+R  +VD++    +V  +I
Sbjct: 178 QAEPERFCVVDASQPLAAVQADI 200


>gi|170720716|ref|YP_001748404.1| thymidylate kinase [Pseudomonas putida W619]
 gi|259494278|sp|B1J4Z5|KTHY_PSEPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169758719|gb|ACA72035.1| dTMP kinase [Pseudomonas putida W619]
          Length = 207

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 6/210 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +   A
Sbjct: 1   MFITLEGPEGAGKSTNRDYLAARLREQGLDVVLTREPGGTPLAEKVRELLLAPSDEVMAA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L++  
Sbjct: 61  DTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAALEQFV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             E+ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  AR +
Sbjct: 121 QGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRARRE 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R  ++D+A   ++V   I  ++  ++++
Sbjct: 175 PQRYDLLDAAQPLEAVQRAIDALLPGILER 204


>gi|254428585|ref|ZP_05042292.1| thymidylate kinase [Alcanivorax sp. DG881]
 gi|196194754|gb|EDX89713.1| thymidylate kinase [Alcanivorax sp. DG881]
          Length = 208

 Score =  149 bits (377), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG EGAGK++++  L   L+     V V+REPGGT  AE+ R VLL+ G +  
Sbjct: 2   SGRFITLEGGEGAGKSSNLEWLADALRAAGKTVTVSREPGGTALAESIRGVLLAPGDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+E  IRPAL  G+ +LCDRF+D+++AYQG         +  L+ 
Sbjct: 62  ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFVDATWAYQGAGRGLDSAAIADLES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +++  PD T++ D+PV++G+ R   R      A LD  E++D    E+ RQ +L  A 
Sbjct: 122 LVIRDTRPDMTVLFDVPVEVGMARAGKR------AALDRIEQEDRAFFERIRQCYLARAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P R   VD+     SV   +  IV E++
Sbjct: 176 QEPSRFRTVDAGQPLGSVQQQLGAIVEEML 205


>gi|56697578|ref|YP_167947.1| thymidylate kinase [Ruegeria pomeroyi DSS-3]
 gi|81558404|sp|Q5LPV9|KTHY_SILPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56679315|gb|AAV95981.1| thymidylate kinase [Ruegeria pomeroyi DSS-3]
          Length = 211

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLF++FEGI+G+GK+T   LL   L+   +DV +TREPGG+P AE  R ++L    D 
Sbjct: 3   GTGLFLTFEGIDGSGKSTQARLLAETLRAAGHDVVLTREPGGSPGAEEIRRLVLEGDPDR 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I PAL  G++++CDRF DS+  YQG         +D L 
Sbjct: 63  WSAETEILLFTAARRDHLERTIEPALAAGRVVICDRFADSTRMYQGLSRGDLRQLVDQLH 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD T+++D+  + GL R + R    E      FE     + ++ R  FLD+A
Sbjct: 123 ALMIGR-EPDLTLLVDMDPETGLSRAKGRQGSEER-----FEDFGPELQQRMRAGFLDLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           R    R  I+D      SVA ++  IV
Sbjct: 177 REYAHRFRIIDGNRDMDSVAADVTEIV 203


>gi|330975208|gb|EGH75274.1| thymidylate kinase [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 210

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+ +LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEGVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+  +   V  ++  ++ +L++
Sbjct: 176 AEPTRYRLVDAGQTLADVQASLDTLLPQLLE 206


>gi|104780789|ref|YP_607287.1| thymidylate kinase [Pseudomonas entomophila L48]
 gi|166223104|sp|Q1ICY2|KTHY_PSEE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|95109776|emb|CAK14481.1| thymidylate kinase [Pseudomonas entomophila L48]
          Length = 210

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 113/202 (55%), Gaps = 6/202 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNREYLAARLREQGVDVVMTREPGGTPLAERIRELLLAPSEEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L+ 
Sbjct: 62  AVDTELLLMFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAILES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A 
Sbjct: 122 FVQGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAG 175

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
            QP R  ++D+A    +V   I
Sbjct: 176 QQPQRYSLLDAAQPLAAVQRAI 197


>gi|71735430|ref|YP_273889.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257487544|ref|ZP_05641585.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289624541|ref|ZP_06457495.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289649352|ref|ZP_06480695.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|123637325|sp|Q48L36|KTHY_PSE14 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71555983|gb|AAZ35194.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320327699|gb|EFW83707.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330869264|gb|EGH03973.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 210

 Score =  149 bits (375), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|330985597|gb|EGH83700.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 210

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFADATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|297172305|gb|ADI23282.1| thymidylate kinase [uncultured actinobacterium HF0770_13M05]
          Length = 208

 Score =  149 bits (375), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 120/220 (54%), Gaps = 12/220 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG+EG GKTT+I  L+  L++K  DV VTREPGGTP AE  R VLL    +
Sbjct: 1   MTRGRFITLEGVEGVGKTTNIGFLREILEQKGIDVLVTREPGGTPLAEEVREVLLQMRDE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++  AAR  HV  VI PAL +G+ +LCDR+ D++YAYQG         L+ L
Sbjct: 61  SMDPITEALLIFAARSQHVSAVIEPALNDGRWVLCDRYTDATYAYQGGGRGVPLDTLERL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +   + PD TI LD PV+I L R+ +R         D FE +D     + R  +L I
Sbjct: 121 AEFAQGSLWPDLTIFLDAPVNIALGRIADRQH-------DRFESEDSEFFARVRAGYLAI 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
              + +R  ++D+  S + V + +     EL+   + PL 
Sbjct: 174 VERE-ERAVLIDATRSLEDVQSRLA----ELINNFLEPLG 208


>gi|226943614|ref|YP_002798687.1| thymidylate kinase [Azotobacter vinelandii DJ]
 gi|226718541|gb|ACO77712.1| thymidylate kinase [Azotobacter vinelandii DJ]
          Length = 211

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 118/215 (54%), Gaps = 6/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG EGAGK+T+   L   L+    +V +TREPGGTP AE  R +LL+   +
Sbjct: 1   MSRGLFITLEGPEGAGKSTNRDYLAEGLRAAGREVVLTREPGGTPLAERIRELLLAPASE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++  AAR  H+  VIRPAL+ G ++LCDRF D+SYAYQG         +  L
Sbjct: 61  PMAVDTELLLVFAARAQHLAGVIRPALVRGAVVLCDRFTDASYAYQGAGRGVPEARIAIL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +     ++ PD T++ DLPV++GL R   R         D FE++D    E  RQ +L  
Sbjct: 121 EHFVQGDLRPDLTLLFDLPVEVGLARAAAR------GRPDRFEQEDRAFFEAVRQAYLRR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A N   R  +VD+      V   +  ++ +L++ R
Sbjct: 175 AANDSARYRVVDAGRPLAEVQRTLDGLLPQLLESR 209


>gi|83593038|ref|YP_426790.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170]
 gi|83575952|gb|ABC22503.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170]
          Length = 214

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 120/223 (53%), Gaps = 9/223 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT +S L + L     +V  TREPGG+P AEA R +L++ G +
Sbjct: 1   MTGGRFITLEGGEGAGKTTQLSRLAQALAPLVPEVVTTREPGGSPGAEAIRGLLVAGGAE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    EA++ AAAR DH+   + PAL  G  ++CDRF DS+ AYQG         LD+L
Sbjct: 61  RWDPRGEALLHAAARRDHLLRTVWPALARGAWVVCDRFADSTSAYQGGGHGLPQDELDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                    PD T+I DLPV +GL R   R         D +ER D   H++    +  I
Sbjct: 121 HAFVCGGFQPDLTVIFDLPVAVGLARAGRR-----GGGEDRYERMDPAFHQRLFDRYHAI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           A   P+RC ++++  + ++V   +    W +V +R   L+ ++
Sbjct: 176 ASAFPERCRLIEADGAIEAVHARL----WAVVLERFPELTERR 214


>gi|298486225|ref|ZP_07004288.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159232|gb|EFI00290.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 210

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDALLPQLLELR 208


>gi|320325316|gb|EFW81383.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 210

 Score =  148 bits (374), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAVAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|296131635|ref|YP_003638882.1| thymidylate kinase [Thermincola sp. JR]
 gi|296030213|gb|ADG80981.1| thymidylate kinase [Thermincola potens JR]
          Length = 211

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 1/192 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG +GAGKTT +    + LQ K Y+V +TREPGGT   E+ R +LL    +  
Sbjct: 2   TGKFITFEGPDGAGKTTQMKRAAQALQEKGYEVILTREPGGTEIGESIRSILLDP-QNRM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  HVE +I PAL  GK++LCDRF DS+ AYQG         L+ +  
Sbjct: 61  SHRTEALLYAAARAQHVEELILPALQAGKVVLCDRFADSTLAYQGYGRGINLNLLNIVNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++  + PD TIILDL   +GL R++N+         D  E + V  H++ R+ FL IA 
Sbjct: 121 LAIGSLKPDLTIILDLDPQVGLNRIRNKRLAVAGETEDRIEMEKVEFHQRVREGFLSIAL 180

Query: 183 NQPDRCHIVDSA 194
             P R  I+ + 
Sbjct: 181 QDPGRYKIIAAG 192


>gi|325275807|ref|ZP_08141675.1| thymidylate kinase [Pseudomonas sp. TJI-51]
 gi|324099059|gb|EGB97037.1| thymidylate kinase [Pseudomonas sp. TJI-51]
          Length = 210

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ P  T++ DLPV++GL R   R        LD FE++     +  RQ +L  A+
Sbjct: 122 FVQGDLRPQLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFQAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P R  ++D+A    +V   I  ++  +V++
Sbjct: 176 REPQRYSLLDAAQPLPAVQRAIDALLPAIVER 207


>gi|229592102|ref|YP_002874221.1| thymidylate kinase [Pseudomonas fluorescens SBW25]
 gi|259494277|sp|C3K0M9|KTHY_PSEFS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229363968|emb|CAY51499.1| thymidylate kinase [Pseudomonas fluorescens SBW25]
          Length = 210

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R VLL+ G ++ 
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G +++CDRF DS+YAYQG         + +L+ 
Sbjct: 62  NPDTELLLVFAARAQHLAEVIRPALARGAVVICDRFTDSTYAYQGGGRGLSLARIATLET 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE +     +  R  FL  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARASAR------GRLDRFELEGQAFFDAVRTAFLTRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P+R +++D+A     V   I  ++  L+++
Sbjct: 176 AEPERYYLLDAAQPLAHVQQAIDALLPTLLER 207


>gi|221632235|ref|YP_002521456.1| thymidylate kinase [Thermomicrobium roseum DSM 5159]
 gi|254808313|sp|B9KXL4|KTHY_THERP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221155655|gb|ACM04782.1| thymidylate kinase [Thermomicrobium roseum DSM 5159]
          Length = 210

 Score =  148 bits (373), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 8/214 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKTT  +LL   L+   Y + VTREPGGTP  E  R  LL+   +    E
Sbjct: 4   FITFEGPEGAGKTTQCALLAARLREAGYSLLVTREPGGTPLGETIREWLLAG--EALRPE 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++F AAR +HV + IRPAL  G I+LCDR++DS+ AYQG        +L  L  I+ 
Sbjct: 62  TEALLFTAARAEHVWDRIRPALERGTIVLCDRYVDSTLAYQGAGRGLDEGWLRELHRIAT 121

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            ++ PD TI+LD+PV++GL R +       +A +   +++++  H + R  +   A+  P
Sbjct: 122 GDLWPDLTILLDVPVEVGLARRRA-----AAATITRLDQEELAFHRRVRAWYHAAAQRDP 176

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK-RVSP 218
            R  +VD+    + VA  +   V E++++ R SP
Sbjct: 177 QRWRVVDATLPPEVVADAVWATVTEVMKRGRRSP 210


>gi|291296874|ref|YP_003508272.1| thymidylate kinase [Meiothermus ruber DSM 1279]
 gi|290471833|gb|ADD29252.1| thymidylate kinase [Meiothermus ruber DSM 1279]
          Length = 205

 Score =  148 bits (373), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 11/202 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+FEG EGAGK+T   LL  +L+ K  +V +TREPGGT   +A R +LL    D  
Sbjct: 2   KGLFITFEGPEGAGKSTQARLLAEWLRAKGREVVLTREPGGTRLGQAIRGLLLH--QDPM 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AEAE ++++A R +H++ VI+PAL  G I+LCDR+LDSS AYQG        +L ++ +
Sbjct: 60  CAEAEYLLYSADRAEHMQRVIQPALGLGHIVLCDRWLDSSLAYQGYGRGLDLGWLRAVAQ 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + Q + P  T + DLP ++GL+R + R         D  ER+ +  H + RQ +L++A+
Sbjct: 120 GATQGIRPHKTFLFDLPPEVGLERFEGR---------DRLEREPLEFHRRVRQGYLELAQ 170

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
            +P+R  ++D+    +++ T +
Sbjct: 171 AEPERFVLLDATQPLEALHTQL 192


>gi|46203463|ref|ZP_00208978.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1]
          Length = 212

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 5/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T + LL   L+ +   V  TREPGG+  AEA R +L+      + 
Sbjct: 6   GRFITFEGGEGAGKSTQVRLLADSLRDEGLMVVTTREPGGSTGAEAIRALLVEGDTARWD 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++  AAR DH+   + PAL  G  ++CDRF DS+ AYQG         + SL  +
Sbjct: 66  GVTEALLHFAARRDHLLKTVWPALERGAWVICDRFADSTLAYQGFGHGLDPDVIASLYRV 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V    PD T++LDLPV+ GL+R   R         D +ER  +  H++ RQ FL IA +
Sbjct: 126 AVGHFAPDLTLVLDLPVETGLERAGAR-----GGAEDRYERMGLGFHQRLRQGFLGIAAS 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P RC ++D+  S   V  +I++ V
Sbjct: 181 NPMRCAVIDATRSPDEVHGDIMSTV 205


>gi|90021281|ref|YP_527108.1| thymidylate kinase [Saccharophagus degradans 2-40]
 gi|89950881|gb|ABD80896.1| thymidylate kinase [Saccharophagus degradans 2-40]
          Length = 208

 Score =  147 bits (372), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +++G FI+ EG EG GK+T+I L+K  LQ+   ++ VTREPGGTP AE  R+VLL+   +
Sbjct: 2   ISTGKFITVEGTEGVGKSTNIELIKTLLQQAGIELVVTREPGGTPLAEELRNVLLANRDE 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F   AE +V  AAR  H+  VI+PAL  GK +L DRF D+++AYQG+        +  L
Sbjct: 62  NFDPLAELLVVFAARAQHINQVIKPALAAGKWVLSDRFTDATFAYQGKGRGLPIQAILQL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++  Q + PD T +LD+ V +GL+R       RE   LD FE + +   EK R  + + 
Sbjct: 122 EQMVQQGLQPDATFLLDIDVQVGLERA------RERGELDRFENEHITFFEKVRAGYHER 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R  ++++  S ++V  ++   V +L+
Sbjct: 176 VAATPERFMVINAGQSLEAVQQDVTLAVEKLL 207


>gi|254417944|ref|ZP_05031668.1| thymidylate kinase [Brevundimonas sp. BAL3]
 gi|196184121|gb|EDX79097.1| thymidylate kinase [Brevundimonas sp. BAL3]
          Length = 210

 Score =  147 bits (372), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 121/218 (55%), Gaps = 11/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G FISFEG EG+GK+T +  L   LQ       V  TREPGG+  AE  R+++++  
Sbjct: 1   MTRGKFISFEGGEGSGKSTQVGRLVERLQPVLGERTVVRTREPGGSKGAEVIRNLVVATE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            + + A  E ++  A+R DH+E  IRPAL  G  ++CDRF DSS AYQG        F++
Sbjct: 61  AEPWSAMTETLLMYASRSDHLERTIRPALAAGDWVVCDRFADSSRAYQGAGGGVAQSFIE 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +    V +  PD T++ DLPV++GL+R   R  L E+     FE K +  H++ R+ FL
Sbjct: 121 QIDAGVVGDDQPDLTLVFDLPVEVGLERAFGR-GLFET----RFESKGLAFHKRLREGFL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            I    P+RC ++D+  S   V       VW+ VQ R+
Sbjct: 176 RIVEAHPERCVLIDAVGSLDEVEAR----VWQAVQDRL 209


>gi|258513464|ref|YP_003189686.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777169|gb|ACV61063.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771]
          Length = 233

 Score =  147 bits (371), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/187 (45%), Positives = 115/187 (61%), Gaps = 11/187 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQR---KNYD-----VHVTREPGGTPAAEAARHVL 54
           G+FI FEGI+G+GKTT I++L K  LQ    KN       V +TREPGGT  +E  R++L
Sbjct: 3   GVFIVFEGIDGSGKTTQINILYKNLLQHNRIKNQPAGSEYVLLTREPGGTATSELIRNIL 62

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           L+   D+  A  EA+++AAAR  HVE  IRPAL  GKI++CDRF+DSS AYQG       
Sbjct: 63  LNPANDKLCARTEALLYAAARAQHVEERIRPALSSGKIVICDRFIDSSLAYQGYGRGQDL 122

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            FL +L +++   + PD TI+LDLPV   LKR+ NR         D  E + V  +E+ R
Sbjct: 123 SFLHNLNQLAAGGLKPDLTILLDLPVGAALKRLNNRQV--SGIEKDRLESEAVSFYERVR 180

Query: 175 QIFLDIA 181
           + +L IA
Sbjct: 181 EGYLKIA 187


>gi|254434496|ref|ZP_05048004.1| thymidylate kinase [Nitrosococcus oceani AFC27]
 gi|207090829|gb|EDZ68100.1| thymidylate kinase [Nitrosococcus oceani AFC27]
          Length = 213

 Score =  147 bits (371), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI  EGIEGAGK+T +  +++ LQ    +V VTREPGGT   E  R +LLS  ++
Sbjct: 1   MGRGRFIVLEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E ++  AAR++HV+ VI PAL  GK +LCDRF  +SYAYQG         +  L
Sbjct: 61  GMSADTELLLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  ++  + PD  ++ D+PV +GL+R   R        LD FE++ +   ++ R I+L +
Sbjct: 121 ESWALNCLRPDLILLFDVPVRLGLQRATTR-----CQQLDRFEQEKIDFFDRARTIYLSL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A+  PD+  ++DS+     V   I  ++   +++
Sbjct: 176 AKKYPDQYRLIDSSLPLTRVQEAIQKVIMAFLEE 209


>gi|85859637|ref|YP_461839.1| thymidylate kinase [Syntrophus aciditrophicus SB]
 gi|123516788|sp|Q2LUB1|KTHY_SYNAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|85722728|gb|ABC77671.1| thymidylate kinase [Syntrophus aciditrophicus SB]
          Length = 219

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 1/196 (0%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEGIEG GKTT + L  ++L+     V  T EPGGTP  +  R++LL+ G  E  AE
Sbjct: 4   FISFEGIEGCGKTTQLKLAAQYLRTLKIPVGTTEEPGGTPLGKKIRNILLNRGPFEICAE 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++F AAR  HV  VI P+L  G+ +LCDRF D++  YQG        ++  L   + 
Sbjct: 64  AETLLFVAARAQHVREVILPSLARGQWILCDRFSDATAVYQGCVRGIDEAWIRQLDSFAT 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             + P+ T++ DLP + GL R   R + + E++  D FE++ +  HEK R+ +L +AR +
Sbjct: 124 SFLKPNLTLLFDLPAETGLHRAMQRMTGIPENSREDRFEQEGLNFHEKIREGYLALARQE 183

Query: 185 PDRCHIVDSAHSFQSV 200
            +R  I+++A    S+
Sbjct: 184 SERFRIINAAADIPSI 199


>gi|118580087|ref|YP_901337.1| dTMP kinase [Pelobacter propionicus DSM 2379]
 gi|166223097|sp|A1APK9|KTHY_PELPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118502797|gb|ABK99279.1| thymidylate kinase [Pelobacter propionicus DSM 2379]
          Length = 219

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 3/217 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG+GKTT I LL   L+   Y V +TREPGG   ++  R +LL        
Sbjct: 2   GYFITFEGIEGSGKTTQIGLLGEQLESLGYSVVMTREPGGCAISDKIRSILLDADNSSIS 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR  HV  VI PAL +G I+LCDRF D++ AYQG         +D+L ++
Sbjct: 62  PMTELLLYAAARAQHVSEVIIPALKQGNIVLCDRFSDATLAYQGSGRGIAREKVDTLNQL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q + PD T+++D  V +GL+R + R         + FE + +  H   R+ +L++A  
Sbjct: 122 ACQSLRPDLTVLIDCDVSVGLERARRRIETASGPREERFELEALEFHRSVREAYLELAHA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
           +P R   VD +   + ++     IV +++Q R++  S
Sbjct: 182 EPQRFITVDGSGGVEEISE---AIVAQVLQNRLNNTS 215


>gi|307826061|ref|ZP_07656274.1| thymidylate kinase [Methylobacter tundripaludum SV96]
 gi|307732900|gb|EFO03764.1| thymidylate kinase [Methylobacter tundripaludum SV96]
          Length = 223

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GKTT+++ +K +L++ N  V VTREPGGT  AE  R +LL    +
Sbjct: 1   MIRGKFITLEGCEGVGKTTNMAFIKDYLEQHNISVVVTREPGGTKLAEKIRQLLLDNKSE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +AE ++  AAR  H+++VI PAL +GK +LCDRF D++YAYQG   + +   +  L
Sbjct: 61  TISEQAELLMMFAARAQHIKHVIEPALAQGKWVLCDRFTDATYAYQGGGRNMKISTIKWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +    + PD T++LD P++IG+ RV      RE   LD FE + +   E  R+ +L  
Sbjct: 121 ENLVQGTLRPDLTLLLDAPIEIGIARV------RERGALDRFELEKISFFENVRRAYLLQ 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P+R  ++ +      V   I +++  L+
Sbjct: 175 AELYPERIKLIKANQPLIDVQRAITDVIRTLL 206


>gi|229823580|ref|ZP_04449649.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271]
 gi|229787024|gb|EEP23138.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271]
          Length = 210

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG +GAGK++ I+ L  +L+ + + V  TREPGG P AE  R V+L     
Sbjct: 1   MFPGKFITLEGPDGAGKSSVIAELTAYLEGQGHQVLTTREPGGVPIAEEIRRVILDVDHI 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119
                 EA++FAAAR  H+  VI PAL +GKI+LCDRF+DSS AYQG  RD    L   S
Sbjct: 61  AMDPRTEALLFAAARRQHLVEVILPALRQGKIVLCDRFVDSSLAYQGMARDIPVDLIW-S 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +V++ +P  T+++D+P ++GL R+      R+    D  +++ +  H + RQ FLD
Sbjct: 120 INQFAVEDQLPALTLLIDVPAEVGLARIHQARGQRQ---YDRLDQESLDFHNRVRQAFLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A+  P+R  ++D       V    ++++
Sbjct: 177 LAQASPERIKVIDGQAPLDQVVAACIDVL 205


>gi|99078562|ref|YP_611820.1| thymidylate kinase [Ruegeria sp. TM1040]
 gi|99035700|gb|ABF62558.1| thymidylate kinase [Ruegeria sp. TM1040]
          Length = 214

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 120/215 (55%), Gaps = 6/215 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SGLF++FEGI+G+GK++   LL   L+    +V +TREPGG+  AE  R ++L    D 
Sbjct: 6   GSGLFLTFEGIDGSGKSSQCRLLAEHLRGLGREVVLTREPGGSEGAEEIRRLVLEGDPDR 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L 
Sbjct: 66  WSAETEILLFTAARRDHLERTILPALSAGKVVICDRFADSTRMYQGLSRGDLRATVDELH 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD TI++D+  + GL R + R    E      FE   + + EK R  FL +A
Sbjct: 126 ALMIGR-EPDVTILIDMDPETGLARAKGRQGTEE-----RFEDFGLALQEKMRAGFLALA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
               DR  IVD A    +VA ++  IV   +++RV
Sbjct: 180 DEFADRFRIVDGARDMDAVAADVARIVEAELEQRV 214


>gi|331012636|gb|EGH92692.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 210

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF + EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFFTLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|182415140|ref|YP_001820206.1| dTMP kinase [Opitutus terrae PB90-1]
 gi|177842354|gb|ACB76606.1| dTMP kinase [Opitutus terrae PB90-1]
          Length = 216

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVD 60
           +G  ISFEG EG+GK+T +S+L   LQ+   DV  TREPGGT   E  R++++  S G D
Sbjct: 9   TGKLISFEGSEGSGKSTQMSMLAARLQKDGRDVVTTREPGGTEIGEQVRNIIVHNSRG-D 67

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  AE E ++FAAAR   V  VI PA+ +G I+L DR+LDSS  YQG     ++L  D +
Sbjct: 68  EMCAETELLLFAAARAQLVREVIAPAMQKGSIVLSDRYLDSSTVYQG---IGRNLAADPV 124

Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +I   +V  VMPD TI++D+P ++GL R++     R S   D  ER+++  ++K R  +
Sbjct: 125 AQINRFAVGNVMPDLTIVIDVPAEVGLARIRQ----RASDLPDRMERENIDFYKKVRDGY 180

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           L +A+   DR  ++D   +   V+  I   V E
Sbjct: 181 LVLAKGMADRFVVIDGTQTQDVVSKKIFAAVKE 213


>gi|70729185|ref|YP_258921.1| thymidylate kinase [Pseudomonas fluorescens Pf-5]
 gi|123656957|sp|Q4KFR2|KTHY_PSEF5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|68343484|gb|AAY91090.1| thymidylate kinase [Pseudomonas fluorescens Pf-5]
          Length = 210

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+    +V +TREPGGTP AE  R VLL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVLLTREPGGTPLAERIRDVLLTPVEEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF DS+YAYQG         + +L++
Sbjct: 62  NADTELLLVFAARAQHLATVIRPALERGAVVLCDRFTDSTYAYQGAGRGLSLARIAALED 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T++ DLPVD+GL R   R        LD FE++     +K R+ FL  A 
Sbjct: 122 FVQGELRPDLTLVFDLPVDVGLARASAR------GRLDRFEQEGQAFFQKVREAFLARAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  +VD+A     V  ++ +++ +L+++
Sbjct: 176 AAPQRYVLVDAAQPLAQVQQSLDSLLPQLLER 207


>gi|146306664|ref|YP_001187129.1| thymidylate kinase [Pseudomonas mendocina ymp]
 gi|166223105|sp|A4XST1|KTHY_PSEMY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145574865|gb|ABP84397.1| thymidylate kinase [Pseudomonas mendocina ymp]
          Length = 210

 Score =  146 bits (369), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL    +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLREQGVDVVLTREPGGTPLAERIRELLLDPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H++ VIRPAL +G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLQQVIRPALAKGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T+I DLPV++GL R   R        LD FE++     E  RQ +L  A 
Sbjct: 122 FVQGELRPDLTLIFDLPVEVGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAV 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P    ++D+  +   V  +I  ++  L++
Sbjct: 176 QAPQHYRVLDAGQTLAQVQADIDALLPSLLE 206


>gi|302390839|ref|YP_003826659.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501]
 gi|302202916|gb|ADL11594.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501]
          Length = 210

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG EGAGK+T I LL ++   + Y+V  TREPGGT      R++LL   +D   
Sbjct: 3   GLFITLEGPEGAGKSTQIELLNKYFSEQGYEVVQTREPGGTEIGSRIRNILLDSNLDNLE 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
            + E +++AA+R  HV  VI+PAL EGK+++CDRF D++ AYQG  R   + L L  L +
Sbjct: 63  PKTELLLYAASRAQHVNEVIKPALKEGKVIICDRFSDATLAYQGYGRRLDKDLIL-KLNQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++   + PD T +LD+  + GL R +N          D  ER+D+  H++ R  +L +A 
Sbjct: 122 MATGGLEPDLTFLLDIEPEEGLLRTKNE-------VRDRIEREDLSFHQQVRDGYLKLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +  R  ++D + S +++  N++  + E ++
Sbjct: 175 KKS-RFEVIDGSQSIENIFDNLIETLEERLE 204


>gi|297572230|ref|YP_003698004.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932577|gb|ADH93385.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595]
          Length = 219

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 10/214 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FISFEG +GAGK+T +  L  +L+   Y V VTREPGGT      RH+LL  G  +  
Sbjct: 2   GMFISFEGGDGAGKSTQVEKLATWLREAGYGVVVTREPGGTELGAHIRHLLLHGG--DVS 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  H++  IRPAL  G+I++ DRF+DSS AYQG   S     +  L   
Sbjct: 60  PRAEALLYAADRAHHMDTKIRPALERGEIVITDRFMDSSIAYQGAARSLGKNEIRDLSLW 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V+  MPD T +LD+PV+ G  RV +     E+A  ++        H + R  FL +A +
Sbjct: 120 AVEGTMPDVTFLLDIPVETGQARVGSEQDRLEAAGAEF--------HARVRNEFLALAED 171

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             DR  ++D   +  S+A +I + V E + K  S
Sbjct: 172 HMDRWRVLDGTQTIDSIAQSIRHHVAEALAKNDS 205


>gi|117929178|ref|YP_873729.1| thymidylate kinase [Acidothermus cellulolyticus 11B]
 gi|117649641|gb|ABK53743.1| thymidylate kinase [Acidothermus cellulolyticus 11B]
          Length = 688

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 15/218 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++FEG EGAGK+T + LL R+L  + Y+V V+REPGGTP     R +LL       
Sbjct: 464 TGFFVAFEGGEGAGKSTQVELLARYLADRGYEVVVSREPGGTPLGHRLREILLDPREPAP 523

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
              AEA+++AA R +HV  VIRPAL  G I++ DR++DSS AYQ G RD S    ++ L 
Sbjct: 524 SPRAEALLYAADRAEHVAKVIRPALARGAIVISDRYVDSSLAYQGGGRDLSPR-DVEQLS 582

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   + PD T++LD+P D GL R       R     D  + +D   HE+ R +F   A
Sbjct: 583 RFATSGLRPDLTVLLDVPPDEGLARTG-----RRDRAPDRLQAEDAAFHERVRNVFRQRA 637

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
              P+R  ++D+  S   +          LV +R+ P+
Sbjct: 638 EADPERYLVIDARLSAADIH--------RLVVQRILPV 667


>gi|254464514|ref|ZP_05077925.1| thymidylate kinase [Rhodobacterales bacterium Y4I]
 gi|206685422|gb|EDZ45904.1| thymidylate kinase [Rhodobacterales bacterium Y4I]
          Length = 215

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+FEGI+G+GK+T   LL   L+    DV +TREPGG+P AE  R ++L    D 
Sbjct: 6   TRGLFITFEGIDGSGKSTQCRLLAEALRAAGRDVVLTREPGGSPGAEEIRRLVLEGDPDR 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D + 
Sbjct: 66  WSAETELLLFMAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRAAVDQMH 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD T+++D+    GL R + R    E      FE   V + EK R  FL +A
Sbjct: 126 RLMIGR-EPDLTLLIDMDPAEGLARAKGRQGKEE-----RFEDFGVELQEKMRAGFLALA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +   DR  +VD A   + VA ++  +  + ++
Sbjct: 180 QEFADRFRVVDGARPVEEVAADVRRLAEDALE 211


>gi|291614001|ref|YP_003524158.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1]
 gi|291584113|gb|ADE11771.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1]
          Length = 202

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 121/208 (58%), Gaps = 9/208 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++  FI+FEG++GAGK+TH+      L+++  D+ VTREPGGT   E  R +LL+  + 
Sbjct: 1   MSTAKFITFEGVDGAGKSTHLDWFANVLRQRGIDLLVTREPGGTQLGERLREILLNQPMH 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AE EA++  AAR +HVE VIRPAL  G  ++ DRF D+S+AYQG         L+ L
Sbjct: 61  ---AETEALLMFAARREHVEQVIRPALQRGTWVISDRFSDASFAYQGGGRGVPVAKLEQL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++    ++ PD T++ D+P++I  +R+ N      +A LD FE++     E+ RQ +L  
Sbjct: 118 EQWVHGDIQPDLTLLFDIPIEIARQRLSN------NASLDRFEQEQGEFFERVRQAYLSR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R  ++ +  S   V  ++  IV
Sbjct: 172 AAKTPHRFAVIHAEKSMDEVKQDLAKIV 199


>gi|94986082|ref|YP_605446.1| thymidylate kinase [Deinococcus geothermalis DSM 11300]
 gi|94556363|gb|ABF46277.1| Thymidylate kinase [Deinococcus geothermalis DSM 11300]
          Length = 210

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 119/218 (54%), Gaps = 15/218 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCG 58
           M  GLF++FEG EGAGK+T ++ L + L         TREPGGTP     R VLL  +  
Sbjct: 1   MRPGLFVTFEGPEGAGKSTQLARLAQRLAETGRPPVTTREPGGTPLGMRVREVLLDPALT 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +D      E ++++A+R   V +VIRPAL  G+++LCDR+ DSS AYQG        FL 
Sbjct: 61  IDPL---PEFLLYSASRAQLVRDVIRPALAAGQVVLCDRYADSSLAYQGSGRGLDPAFLA 117

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L       + PD TI+LDL   +GL R  +R         D  ER D+  H + R  FL
Sbjct: 118 ALTGEVTGGLQPDLTILLDLDPALGLARAASR------GQPDRLERADLTFHRRVRHGFL 171

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           D+A   P+R  ++D+A    S+A +I    W  VQ+R+
Sbjct: 172 DLAAQAPERFLVLDAARDPDSLAADI----WRAVQERL 205


>gi|323701668|ref|ZP_08113340.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
 gi|323533441|gb|EGB23308.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
          Length = 215

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI FEG++G+GKTT +SLL ++L   +   + TREPGGTP  E  R +LL+    +  
Sbjct: 11  GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPGGTPLGEKIRELLLNPDFIDMQ 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  EA+++AAAR   V   IRP L +G ++LCDR++DSS AYQG        FL  + ++
Sbjct: 71  SRTEALLYAAARAQLVAQEIRPRLQQGTVVLCDRYIDSSLAYQGYGRGMDIDFLIKINQL 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + P   I+LDLP + GL R       R+    D  E + +  H + R  +L++AR 
Sbjct: 131 GTGGLNPQLVILLDLPPEEGLIRS------RKVGPADRLENEALDFHRRVRAGYLELARK 184

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            PDR  ++D+  S Q++   I  +V  +V
Sbjct: 185 NPDRYLVLDARESIQTLHQEICRVVGGMV 213


>gi|312962561|ref|ZP_07777051.1| Thymidylate kinase [Pseudomonas fluorescens WH6]
 gi|311283141|gb|EFQ61732.1| Thymidylate kinase [Pseudomonas fluorescens WH6]
          Length = 210

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R VLL+ G ++ 
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G +++CDRF DS+YAYQG         + +L+ 
Sbjct: 62  NPDTELLLVFAARAQHLSEVIRPALARGAVVICDRFTDSTYAYQGGGRGLCLARIATLES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++G+ R   R        LD FE +     +  R  FL  A+
Sbjct: 122 FVQGDLRPDLTLLFDLPVEVGMARASAR------GRLDRFELEGQAFFDLVRSAFLARAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P R H++D++     V   I  ++  L+++
Sbjct: 176 AEPARYHLLDASQPLAQVQQAIDALLPLLLER 207


>gi|297616259|ref|YP_003701418.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144096|gb|ADI00853.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
          Length = 223

 Score =  145 bits (367), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 7/214 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+   FISFEGI+GAGKTT + LL R L    + V   REPG TP +E  R +LL     
Sbjct: 1   MHRKCFISFEGIDGAGKTTQVELLYRKLMDVGFSVVAVREPGSTPLSEKIRELLLDVRNQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  + AE+ ++AAAR   V  +I+PAL  GK+++ DR++DS+ AYQG        FL  L
Sbjct: 61  DISSSAESFLYAAARSQLVAEIIKPALDAGKVVIADRYVDSTIAYQGYGRGMDIEFLKRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++   +MP  TI+LDLP + G+ R       R    LD  ER+ +  H   R+ +L +
Sbjct: 121 NLLATGGLMPCLTILLDLPPEEGIAR-------RGELPLDRLEREGIGFHRAVREGYLTL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +R++PDR  +VD+    + V   IL  V E +++
Sbjct: 174 SRSEPDRIMVVDARLQVEDVHEQILKRVLERLRR 207


>gi|260426355|ref|ZP_05780334.1| thymidylate kinase [Citreicella sp. SE45]
 gi|260420847|gb|EEX14098.1| thymidylate kinase [Citreicella sp. SE45]
          Length = 208

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 117/203 (57%), Gaps = 6/203 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFISFEGI+G+GK+T   LL   L+   ++V +TREPGG+P AE  R ++L    D 
Sbjct: 4   GTGLFISFEGIDGSGKSTQARLLAEQLRGDGHEVVLTREPGGSPGAEEIRALVLQGDPDR 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I+PAL  G  ++CDRF DS+  YQG         +D+L 
Sbjct: 64  WSAETELLLFTAARRDHLERTIQPALARGATVICDRFADSTRMYQGLSRGDLRAAVDALH 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +  V PD TI++D+     L R + R +  E      FE   + + EK R  FL +A
Sbjct: 124 ERMIG-VEPDLTILIDMDPAAALPRAKARATAEE-----RFEDFGLPLQEKMRAGFLALA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
              PDR  I+D   + ++VA ++
Sbjct: 178 AEFPDRFRIIDGNRAPEAVARDV 200


>gi|56551986|ref|YP_162825.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543560|gb|AAV89714.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 216

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +  G FIS EG EG GK+T I LL   L+ K    V  TREPGG    +A RH+LL   +
Sbjct: 7   VTHGYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDL 66

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             +    EA++FAAAR +HV  VI+PAL EGK ++CDRF+DSS AYQG+        +  
Sbjct: 67  HRWTNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQGDIRC 126

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L  I  Q ++PD T +L LP   G++R Q     R+    + FE++ +  H+K    FL 
Sbjct: 127 LHRIGSQGILPDRTFLLTLPEGEGIRRAQE----RDKNKGNRFEQRTIDYHKKVNDSFLQ 182

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +A  +P+R  ++D++ + + V
Sbjct: 183 LAAKEPERFRVIDASGNPEEV 203


>gi|83311549|ref|YP_421813.1| thymidylate kinase [Magnetospirillum magneticum AMB-1]
 gi|82946390|dbj|BAE51254.1| Thymidylate kinase [Magnetospirillum magneticum AMB-1]
          Length = 212

 Score =  145 bits (366), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 5/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T + LL   L+ +   V  TREPGG+  AEA R +L+    + + 
Sbjct: 6   GRFITFEGGEGAGKSTQVRLLAESLRDEGLMVVTTREPGGSAGAEAIRALLVEGEPERWD 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++  AAR DH+   + PAL  G  ++CDRF DS+ AYQG         + SL  +
Sbjct: 66  GVTEALLHFAARRDHLVKTVWPALDRGAWVICDRFADSTLAYQGFGHGLDPDVIASLYRV 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V    PD T++LDLPV+ GL+R   R         D +ER  +  H++ RQ FL IA  
Sbjct: 126 AVGHFAPDLTLVLDLPVEKGLERAGLR-----GGAEDRYERMGLGFHQRLRQGFLGIAAA 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P RC ++D+  S   V  +I++ V
Sbjct: 181 NPMRCAVIDATRSPDEVHGDIMSTV 205


>gi|212703732|ref|ZP_03311860.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098]
 gi|212672884|gb|EEB33367.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098]
          Length = 217

 Score =  145 bits (365), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 3/217 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GKTT   LL   L+++ +DV +TREPGG     A R +LL         
Sbjct: 1   MFITFEGIEGSGKTTAQQLLALELEKRGHDVLLTREPGGCGLGRALRPILLDARNAGLCN 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R  HV  ++RPAL  G+I++CDR+ DS+ AYQG         L    +++
Sbjct: 61  RAELYLFLADRAQHVAEIVRPALEAGQIVICDRYTDSTLAYQGYGRGRDPDRLRRANDLA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182
              + PD T++ DLPV +GL+R   R + RE   L    F+ + +  HE+ RQ +L IA 
Sbjct: 121 TGGLQPDLTLLCDLPVSVGLERAGLR-NRREGTVLSEGRFDSESLNFHERVRQGYLTIAE 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
            +PDR  I+D++   + V    L+ V   +++R S L
Sbjct: 180 EEPDRIAIIDASQQPEDVVLQCLSAVERHLKRRGSGL 216


>gi|114799318|ref|YP_760517.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444]
 gi|114739492|gb|ABI77617.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444]
          Length = 219

 Score =  145 bits (365), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G FI+ EG EG GK+T    L R L+     V VTREPGGTP AEAAR +LL     E 
Sbjct: 6   AGHFITLEGGEGTGKSTLAKALARKLEAHGIGVVVTREPGGTPLAEAARQLLLHPPEGEA 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   +EA++  AAR DH+E +IRPAL  G  ++CDRF DS+  YQ          L S++
Sbjct: 66  WSPLSEALLVNAARRDHLEKLIRPALARGDWVICDRFADSTRVYQSIEGGVDVSALLSIE 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + + +P  T+ILD+ +D+  KR   R     +  LD FER+    HE  R  F DIA
Sbjct: 126 REVLGDTVPSMTLILDVSLDVASKRRTAR-----AGALDTFERRPKAFHEAVRAAFQDIA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R++P RC ++D+          +L+  W+ V
Sbjct: 181 RSEPARCRLIDT----DVTPDQVLDAAWKQV 207


>gi|192362258|ref|YP_001982459.1| thymidylate kinase [Cellvibrio japonicus Ueda107]
 gi|190688423|gb|ACE86101.1| thymidylate kinase [Cellvibrio japonicus Ueda107]
          Length = 213

 Score =  144 bits (364), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG F++ EG EG GK+T+++ ++ +L+ +  ++ VTREPGGTP AE  R++LL+   +
Sbjct: 6   MQSGKFLTMEGTEGVGKSTNLAFVRAWLEARGIELIVTREPGGTPLAEEIRNLLLAKRTE 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++  AAR  H+  VI+PAL  G  +L DRF D++YAYQG         ++ L
Sbjct: 66  PVDETAELLLVFAARAQHLAQVIKPALARGAWVLSDRFTDATYAYQGGGRGLSLAIIEQL 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  Q++ PD T++LD+ V  GL+R   R      A LD FE + +   E+ R  +   
Sbjct: 126 ENLVQQQLRPDLTLVLDIDVQKGLERASQR------AELDRFESESLAFFERVRAAYHSR 179

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A   P+R  ++D+  S + V  +I   + +L+Q
Sbjct: 180 AAMAPERYTLIDAGQSLERVQQDIAARLEQLIQ 212


>gi|189425005|ref|YP_001952182.1| dTMP kinase [Geobacter lovleyi SZ]
 gi|254808293|sp|B3E2K5|KTHY_GEOLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189421264|gb|ACD95662.1| dTMP kinase [Geobacter lovleyi SZ]
          Length = 212

 Score =  144 bits (364), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 115/205 (56%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T I+LL   LQ+    V +TREPGG P A+  R VLL         
Sbjct: 1   MFITFEGIEGCGKSTQIALLAASLQQAGQRVLLTREPGGCPIADQIRSVLLDAANTALVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++AA+R  H+  V+ PAL EG I+LCDRF D++ AYQ          +++L  ++
Sbjct: 61  MAELMLYAASRAQHLAEVVSPALAEGVIVLCDRFSDATRAYQSFGRGIDRQVIETLNSLA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T++LD PV+ GL R + R         + FE + +  H++ R  +L +A  +
Sbjct: 121 CDGISPDLTVLLDCPVETGLGRARQRIDSTSGPREERFELESLAFHQRVRDGYLQLAAEE 180

Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209
           P R  IVD+      VA+ I + V 
Sbjct: 181 PGRFVIVDATVQPAQVASAISDAVL 205


>gi|329850687|ref|ZP_08265532.1| thymidylate kinase [Asticcacaulis biprosthecum C19]
 gi|328841002|gb|EGF90573.1| thymidylate kinase [Asticcacaulis biprosthecum C19]
          Length = 218

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 9/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G FI FEG EGAGK+T +  L + L+    +V  TREPGG+P AE  R++L+      
Sbjct: 7   STGRFIVFEGGEGAGKSTQVQALVKRLRDFGLEVVQTREPGGSPGAEVLRNLLVQGDAGR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   +E ++  AAR DH+E VIRPAL  G  ++CDRF DSS AYQG        F++ + 
Sbjct: 67  WSPMSETLMMYAARSDHLETVIRPALERGAWVVCDRFADSSRAYQGAGGGVAPEFIEQID 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V +  PD  ++LD+PV+ GL R   R         + FE K +  HE+ RQ FL+ A
Sbjct: 127 AAVVGDTQPDLVLVLDMPVEAGLARASARGDKE-----NRFESKGLAFHERLRQGFLNRA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P+R  + ++    +     + N +W ++ +
Sbjct: 182 AKVPERYRVFNADQPIEP----LFNDIWRVMAR 210


>gi|241761931|ref|ZP_04760016.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241373611|gb|EER63183.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 216

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +  G FIS EG EG GK+T I LL   L+ K    V  TREPGG    +A RH+LL   +
Sbjct: 7   VTHGYFISLEGGEGVGKSTQIRLLVAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDL 66

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             +    EA++FAAAR +HV  VI+PAL EGK ++CDRF+DSS AYQG+        +  
Sbjct: 67  HRWTNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQEDIRC 126

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L  I  Q ++PD T +L LP   G++R Q     R+    + FE++ +  H+K    FL 
Sbjct: 127 LHRIGSQGILPDRTFLLTLPEGEGIRRAQE----RDKNKGNRFEQRTIDYHKKVNDSFLQ 182

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +A  +P+R  ++D++ + + V
Sbjct: 183 LAAKEPERFRVIDASGNPEEV 203


>gi|134297938|ref|YP_001111434.1| dTMP kinase [Desulfotomaculum reducens MI-1]
 gi|172044205|sp|A4J0K6|KTHY_DESRM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|134050638|gb|ABO48609.1| thymidylate kinase [Desulfotomaculum reducens MI-1]
          Length = 207

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 117/200 (58%), Gaps = 6/200 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEG++G+GK+T ++LL ++L +K      TREPGGTP  E  R +LL     E   
Sbjct: 4   IFIVFEGVDGSGKSTQLNLLNKYLSQKEIKTICTREPGGTPVGEKIRELLLDPNFAEIQD 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++++AAR   V  VIRP L +G ++LCDR++DS+ AYQG        FL  + E++
Sbjct: 64  RTEALLYSAARAQLVAQVIRPQLEQGTVVLCDRYIDSTLAYQGYGRGMDISFLAQINELA 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              +MP+ TI+LDLP + GL+R       R+    D  E + +  + K R  +L++A+ +
Sbjct: 124 SGGLMPNITILLDLPPEEGLQRS------RKDRPADRLENESLTFYHKVRSGYLEMAKRK 177

Query: 185 PDRCHIVDSAHSFQSVATNI 204
           PD   ++D+  + + +   I
Sbjct: 178 PDTYLVLDARQTMEQLHRQI 197


>gi|299536748|ref|ZP_07050058.1| thymidylate kinase [Lysinibacillus fusiformis ZC1]
 gi|298727862|gb|EFI68427.1| thymidylate kinase [Lysinibacillus fusiformis ZC1]
          Length = 209

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNS LFI+FEG EGAGKTT I ++ + L  KN +V  TREPGG   AE  R ++L+    
Sbjct: 1   MNSNLFITFEGPEGAGKTTVIQMIAKRLTEKNIEVLATREPGGIEIAEKIRTIILNPAHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H    +RPAL  GK+++CDRF+DSS AYQG         + S+
Sbjct: 61  AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQGYARGIGVNEVLSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++ + +PD TI+ DL  ++GL R+    + RE   LD    + +  H+K R+ +L +
Sbjct: 121 NEFAIGKKLPDVTILFDLAPEVGLARIHATGN-REVNRLDV---ESLPFHQKVREGYLQL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               P+R  +V++    ++V  ++  ++ E +Q
Sbjct: 177 VEQYPERIRVVNADQDIENVVEDVWLLLLEAMQ 209


>gi|254293993|ref|YP_003060016.1| thymidylate kinase [Hirschia baltica ATCC 49814]
 gi|254042524|gb|ACT59319.1| thymidylate kinase [Hirschia baltica ATCC 49814]
          Length = 211

 Score =  144 bits (363), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 126/218 (57%), Gaps = 10/218 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           MN G F++ EG EG GK+T  S L++ L   +    +TREPGG+   EA R+++L+    
Sbjct: 1   MNLGRFVTLEGGEGVGKSTLASNLQKKLLELDIKCLLTREPGGSLGGEAIRNIVLNPPHH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            ++    + ++F AAR DH+ENVI+PAL+ G+ ++CDRF DS+ AYQ          + +
Sbjct: 61  QDWSPLTQTLLFFAARCDHLENVIKPALLRGEWVICDRFTDSTRAYQAVAGGVDDHVVST 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L ++ V E  PD T++LD+P+++  KR      +  +   D FE+     HE  RQ FL+
Sbjct: 121 LDQLVVNEQQPDLTLLLDMPLEVSAKR-----RIERNGPQDAFEKLPQSFHENVRQAFLE 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           IA    DRC+++D+++S   V    L    EL+ KR S
Sbjct: 176 IADRYKDRCYVLDASNSVDQVTAEAL----ELICKRFS 209


>gi|330718537|ref|ZP_08313137.1| thymidylate kinase [Leuconostoc fallax KCTC 3537]
          Length = 217

 Score =  144 bits (363), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 126/220 (57%), Gaps = 13/220 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FISFEG EGAGKT+ + +L+         D+  TREPGG P AEA R +L     
Sbjct: 1   MSEAKFISFEGPEGAGKTSVLQALIGELGPMLGDDLVTTREPGGNPIAEAIRAILQPEED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118
           +      EA+++AAAR  H+   I+PAL  GK+++ DR++DSS AYQG     + L +D 
Sbjct: 61  NGMDKRTEALLYAAARRQHLVETIQPALAAGKVVISDRYIDSSLAYQG---GGRDLGVDR 117

Query: 119 --SLQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQ 175
             +L + + + ++PD TI LD+P DIGLKRV Q+R        +D  +++D+  H K R 
Sbjct: 118 IWTLNQFATEGLLPDLTIYLDVPADIGLKRVMQHR-----QGKIDRLDKEDLSFHIKVRN 172

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +L +    PDR  ++D+    + V T    ++W+ ++ R
Sbjct: 173 TYLALRDQFPDRIQVIDATQPLEMVITATRALIWQQLKNR 212


>gi|86136161|ref|ZP_01054740.1| thymidylate kinase [Roseobacter sp. MED193]
 gi|85827035|gb|EAQ47231.1| thymidylate kinase [Roseobacter sp. MED193]
          Length = 218

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 113/204 (55%), Gaps = 6/204 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEGI+G+GK+T    L   L+   YDV +TREPGG+  AE  R ++L    D++
Sbjct: 6   TGLFLTFEGIDGSGKSTQCKRLAETLRLAGYDVVLTREPGGSEGAEEIRRMVLEGDPDKW 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  
Sbjct: 66  SAETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRTTVDQLHT 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T+++D+    GL R + R    E      FE   + + EK R  FL +A 
Sbjct: 126 LMIGR-EPDLTLLIDMDPATGLSRAKGRQGTEE-----RFEDFGLGLQEKMRAGFLSLAE 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
               R  +VD A    +VA ++L 
Sbjct: 180 EFSTRFRVVDGAQDIDTVAADVLR 203


>gi|297242601|ref|ZP_06926540.1| thymidylate kinase [Gardnerella vaginalis AMD]
 gi|296889410|gb|EFH28143.1| thymidylate kinase [Gardnerella vaginalis AMD]
          Length = 239

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 16/216 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFISFEGI+G GKTT +  LK +LQ    +V VTREPGGT   +  R +LL      
Sbjct: 33  NKGLFISFEGIDGVGKTTQVEALKDYLQSSGREVVVTREPGGTQLGKTLREILLHGT--S 90

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118
             A  EA++FAA R  HV  VIRPAL  G +++ DR++DSS AYQ      + L +D   
Sbjct: 91  VSARTEALLFAADRAQHVAQVIRPALNRGAVVITDRYIDSSLAYQA---GGRELTMDDVR 147

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L E +   + P+ T +LD+  +   KR+       ESA +D+  R         R+ FL
Sbjct: 148 TLSEWATDSLWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRT--------REAFL 199

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           D+A+   DR  ++D+  S +S++  I+  V  L+++
Sbjct: 200 DLAQESADRYRVLDATFSAKSLSELIVQDVHNLIEE 235


>gi|330891466|gb|EGH24127.1| thymidylate kinase [Pseudomonas syringae pv. mori str. 301020]
          Length = 189

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 111/193 (57%), Gaps = 6/193 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAH 195
             P R  +VD+A 
Sbjct: 176 ADPARYRLVDAAQ 188


>gi|259415239|ref|ZP_05739161.1| thymidylate kinase [Silicibacter sp. TrichCH4B]
 gi|259349149|gb|EEW60903.1| thymidylate kinase [Silicibacter sp. TrichCH4B]
          Length = 214

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 6/214 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++FEGI+G+GK++   LL   L+    +V  TREPGG+  AE  R ++L    D 
Sbjct: 6   GPGLFLTFEGIDGSGKSSQCRLLADHLRGLGREVVQTREPGGSAGAEEIRSLVLEGDPDR 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +DSL 
Sbjct: 66  WSAETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRATVDSLH 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ +    PD TI++D+  + GL R + R    E      FE   + + EK R  FL +A
Sbjct: 126 KLMIGR-EPDVTILIDMDPETGLARAKGRQGTEER-----FEDFGLALQEKMRAGFLSLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               DR  IVD A    +VA +I  I    + +R
Sbjct: 180 DEFADRFRIVDGAQDMNAVAADIARIAEAELDQR 213


>gi|163732222|ref|ZP_02139668.1| thymidylate kinase [Roseobacter litoralis Och 149]
 gi|161394520|gb|EDQ18843.1| thymidylate kinase [Roseobacter litoralis Och 149]
          Length = 212

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 6/207 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLFISFEGI+G+GK+T    L   L+ + ++V  TREPGG+P AE  R ++L    D 
Sbjct: 7   DNGLFISFEGIDGSGKSTQSKRLAEHLRVRGHEVVETREPGGSPGAEEIRALVLQGDPDR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+  YQG         +D+L 
Sbjct: 67  WSAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLH 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ +    PD T+++D+   IGL R  +R +  E      FE     +  K R  FL +A
Sbjct: 127 DLMIGR-EPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQAKMRAGFLALA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    R  +VD      SV  +++N+V
Sbjct: 181 QEFKARFRLVDGGRDADSVTQDVINVV 207


>gi|254455158|ref|ZP_05068593.1| thymidylate kinase [Octadecabacter antarcticus 238]
 gi|198263568|gb|EDY87840.1| thymidylate kinase [Octadecabacter antarcticus 238]
          Length = 215

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 112/201 (55%), Gaps = 10/201 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEGI+G+GK+T   LLK  L     D  +TREPGG+  AE  R +LL+   D + 
Sbjct: 14  GLFISFEGIDGSGKSTQTKLLKDRLP----DAVLTREPGGSAGAEEIRALLLTGDPDRWS 69

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  IRPAL  GK ++CDRF DS+  YQG    +    +D+L ++
Sbjct: 70  AETEILLFTAARRDHLEKTIRPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHDV 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T I+D+   + L R      L   +  D FE   +   E  R  FL +A+ 
Sbjct: 130 MIGR-EPDLTFIIDMDPAVALSR-----GLARGSGEDRFEDMGLAFQETLRHGFLALAKA 183

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
            PDRC ++D      +VA  I
Sbjct: 184 NPDRCVLIDGNRDPVAVAAEI 204


>gi|307292799|ref|ZP_07572645.1| thymidylate kinase [Sphingobium chlorophenolicum L-1]
 gi|306880865|gb|EFN12081.1| thymidylate kinase [Sphingobium chlorophenolicum L-1]
          Length = 208

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 109/200 (54%), Gaps = 5/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FIS EG EGAGK+T I  L   L+++  +V  TREPGG+  AEA R +LL+ G D
Sbjct: 1   MTQGRFISLEGGEGAGKSTQIRALAAALRQRGLEVVETREPGGSEGAEAIRALLLTGGAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +   AEA++FAAAR DHVE  IRPAL  G  +L DRFLDSS AYQG  D S    L +L
Sbjct: 61  RWSPRAEALLFAAARADHVERTIRPALDRGAWVLSDRFLDSSRAYQGMGDLSDADIL-AL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I     +PD T+ L LP      R ++    R+    D    +D   H+   + F   
Sbjct: 120 HRIGSGGFLPDRTLFLTLPEAEATARARS----RDGDASDRIGGRDPAFHQAVARAFTRF 175

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
           A  +P R   VD+A    +V
Sbjct: 176 AEQEPGRFLTVDAAGDSAAV 195


>gi|114770996|ref|ZP_01448436.1| thymidylate kinase [alpha proteobacterium HTCC2255]
 gi|114548278|gb|EAU51164.1| thymidylate kinase [alpha proteobacterium HTCC2255]
          Length = 209

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEGI+G+GK+T   LL   L      V  TREPGG+  AE  R +L+S   D + 
Sbjct: 6   GLFITFEGIDGSGKSTQSQLLYDALNDLGISVIQTREPGGSIGAEIIRSLLVSGDTDRWS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I+PAL + +I++CDRF+DS+  YQG   +     +D L  I
Sbjct: 66  AETEILLFTAARRDHLEKTIQPALTKNQIVICDRFVDSTRVYQGVARADLRQTVDELHSI 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +++  PD T I+D   +  L R      L  ++  D FE   +   +K R  F ++++ 
Sbjct: 126 IIKK-EPDITFIIDTDPEKSLTR-----GLARNSGEDRFEEFGLEFQKKLRNGFSELSKT 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +  RCH+++   S + V+ +ILNIV
Sbjct: 180 EKSRCHLINGMRSKEEVSNDILNIV 204


>gi|189485350|ref|YP_001956291.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
 gi|170287309|dbj|BAG13830.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
          Length = 211

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 114/208 (54%), Gaps = 1/208 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI+FEG EG+GKTTH  LLK++L+++ Y+V +TREPGGT  AEA R +LL+   +
Sbjct: 1   MKKNLFITFEGGEGSGKTTHSLLLKKYLEKRGYEVLLTREPGGTILAEAVRRILLNPDSN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +E  ++ AAR  HVE  + PAL  GK ++CDRF D++ AYQG         +DSL
Sbjct: 61  -IVPLSELFLYEAARAQHVEEFVFPALNAGKAVICDRFTDATVAYQGYGRKLNLQLIDSL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + P  TI LD+    GL R +    L      D  ER+ +  HE  R+ +L  
Sbjct: 120 NSTTSFGLTPVLTIYLDILPSEGLSRAKRAKKLNRKIYSDKIERESLQFHESVREGYLSQ 179

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P+R  +V +  + +     I  I+
Sbjct: 180 AEKYPERIKVVKTQETVEKTEVCIREII 207


>gi|254489864|ref|ZP_05103059.1| thymidylate kinase [Methylophaga thiooxidans DMS010]
 gi|224464949|gb|EEF81203.1| thymidylate kinase [Methylophaga thiooxydans DMS010]
          Length = 206

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 125/210 (59%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FIS EGIEGAGK+T +  ++ FL+ +   V VTREPGGT   E  R +LL+   +  
Sbjct: 2   NGKFISIEGIEGAGKSTQMRFIQSFLEHQGKTVVVTREPGGTVLGEQIRELLLTPRDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR +H+E VI+PAL  G  +L DRF+D+++AYQG         ++S+ +
Sbjct: 62  SHDAELLLMFAARAEHLEQVIKPALSRGDWVLSDRFVDATFAYQGGGRGIDIKRIESISD 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++Q +  D T++ DLPV +G +RV     ++ S   D FE++  +  EK RQ +L  A 
Sbjct: 122 WTLQAIHTDLTLLFDLPVAVGQERV-----IKRSQDKDRFEQEKGVFFEKIRQCYLQRAD 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++PDR   +D+  + +++   +   +  L+
Sbjct: 177 HEPDRIKKIDAGQTIENIQHQVTTALMALL 206


>gi|126739768|ref|ZP_01755459.1| thymidylate kinase [Roseobacter sp. SK209-2-6]
 gi|126719000|gb|EBA15711.1| thymidylate kinase [Roseobacter sp. SK209-2-6]
          Length = 221

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEGI+G+GK+T   LL   L+    +V +TREPGG+P AE  R ++L    D++ 
Sbjct: 11  GLFLTFEGIDGSGKSTQCKLLAEALRFAGKEVVLTREPGGSPGAEEIRRIVLEGDPDKWS 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L ++
Sbjct: 71  AETEILLFTAARRDHLERTILPALKAGKVVICDRFADSTRMYQGLSRGDLRQTVDQLHDL 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +Q   PD T+++D+  + GL R + R    E      FE   + + ++ R  FL +A+ 
Sbjct: 131 MIQR-EPDLTLLIDMDPETGLSRAKGRQGREE-----RFEDFGLGLQQQMRAGFLSLAQE 184

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
              R  ++D       VA  +L + 
Sbjct: 185 FNKRFRVIDGTQPIDKVAAKVLAVA 209


>gi|330810988|ref|YP_004355450.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379096|gb|AEA70446.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 210

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   LQ    +V +TREPGGTP AE  R VLL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLQAAGIEVVLTREPGGTPLAERIREVLLAPIEEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G ++LCDRF DS+YAYQG         + +L+ 
Sbjct: 62  NPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSVERIAALEA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE +        R  FL  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARASAR------GRLDRFELEGQAFFNAVRNAFLSRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+A     V  ++  ++  L+++
Sbjct: 176 ADPARYLLIDAAQPLTQVQQSLDGLLPRLLER 207


>gi|87199958|ref|YP_497215.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444]
 gi|87135639|gb|ABD26381.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444]
          Length = 209

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G F++FEG EG GK+T   LL   L+ +  +V  TREPGGT  AEA R +LLS   +
Sbjct: 1   MSRGRFVAFEGGEGVGKSTQGRLLAESLRARGLEVVTTREPGGTAGAEAIRTMLLSTEGE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +GA AEA++FAAAR DHVE +IRP++  G  ++CDRF+DSS AYQG         +  L
Sbjct: 61  GWGARAEALLFAAARADHVEKLIRPSVARGAWVVCDRFVDSSRAYQGGGSGLSDADVMQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    ++PD TI+L +  +I   R+    ++R+    D    +    H +    F   
Sbjct: 121 HRIGSAGLLPDVTILLTVRPEISAARL----AMRDGNAADRIGGRGEEYHGRVAAAFRRF 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A  +PDR  +VD+  S + V   +   +
Sbjct: 177 AEQEPDRFAVVDAEGSPEEVHARVTAAI 204


>gi|71907819|ref|YP_285406.1| thymidylate kinase [Dechloromonas aromatica RCB]
 gi|123627287|sp|Q47DZ5|KTHY_DECAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71847440|gb|AAZ46936.1| thymidylate kinase [Dechloromonas aromatica RCB]
          Length = 204

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 123/207 (59%), Gaps = 10/207 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEGI+GAGK++H+  L   L+++   VHVTREPGGT   E  R +LL+   +  
Sbjct: 2   KGKFITFEGIDGAGKSSHVEWLAGLLRQRGIVVHVTREPGGTELGEKLRELLLN---EPM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
             E E ++  AAR +H+  +I PAL  G+ ++CDRF D++YAYQ G R   +  FL +L+
Sbjct: 59  HLETETLLMFAARREHLARLIEPALARGEWVVCDRFSDATYAYQGGGRGLDRAKFL-ALE 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD T++ DLP+D+  +R+     +  +  LD FE++ V  HE+ RQ +L+ A
Sbjct: 118 HWVHGHLQPDLTLLFDLPLDVARERI-----VLANRVLDKFEQERVDFHERVRQAYLERA 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P R  ++D+  S +++   +  IV
Sbjct: 173 HTSPSRIRVIDANQSIENIRKQLEQIV 199


>gi|260752471|ref|YP_003225364.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258551834|gb|ACV74780.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 216

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +  G FIS EG EG GK+T I LL   L+ K    V  TREPGG    +A RH+LL   +
Sbjct: 7   VTHGYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDL 66

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             +    EA++FAAAR +HV  VI+PAL +GK ++CDRF+DSS AYQG+        +  
Sbjct: 67  HRWTNATEALLFAAARAEHVARVIKPALEKGKWVVCDRFIDSSLAYQGDAGGLTQEDIRC 126

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L  I  Q ++PD T +L LP   G++R Q     R+    + FE++ +  H+K    FL 
Sbjct: 127 LHRIGSQGILPDRTFLLTLPEGEGIRRAQE----RDKNKGNRFEQRTIDYHKKVNDSFLQ 182

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +A  +P+R  ++D++ + + V
Sbjct: 183 LAAKEPERFRVIDASGNPEEV 203


>gi|154684547|ref|YP_001419708.1| thymidylate kinase [Bacillus amyloliquefaciens FZB42]
 gi|166221718|sp|A7Z0F1|KTHY_BACA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|154350398|gb|ABS72477.1| Tmk [Bacillus amyloliquefaciens FZB42]
          Length = 212

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEMKEILSAEGLPVTATREPGGIDIAEQIREVILNKNNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
            A+ EA+++AAAR  H+   ++PAL EG+I+LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DAKTEALLYAAARRQHLAEKVQPALKEGRIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++ + MPD TI   +  + GLKR+ +  S RE   LD    + +  H K R+ +  
Sbjct: 119 INQFAIGDTMPDVTIYFSIEPEEGLKRITSNDS-REKNRLDL---EALHFHTKVREGYQK 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P+R H +D++   + V  + L ++ E ++K
Sbjct: 175 VMQRFPERFHTIDASKKKELVIQDALQVINEALKK 209


>gi|254486634|ref|ZP_05099839.1| thymidylate kinase [Roseobacter sp. GAI101]
 gi|214043503|gb|EEB84141.1| thymidylate kinase [Roseobacter sp. GAI101]
          Length = 210

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 6/204 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FISFEGI+G+GK+T   +LK  L+   YDV +TREPGG+P AE  R ++L    D 
Sbjct: 3   SQGFFISFEGIDGSGKSTQTKILKESLEALGYDVILTREPGGSPGAEEIRALVLQGDPDR 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + A+ E ++F AAR DH+E  I+PAL  GK+++CDRF DS+  YQG         +D L 
Sbjct: 63  WSAQTEILLFTAARRDHLERTIQPALDAGKVVICDRFADSTRMYQGLSRGDLRDAVDQLH 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  + PD T+++D+    GL R  +R ++ E      FE     +    R+ FL +A
Sbjct: 123 ALMIG-IEPDLTVLIDMDPAEGLSRALSRNTVEER-----FEDFGESLQVAMRKGFLALA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205
               DR  ++D A     VA ++L
Sbjct: 177 EEFDDRFVVIDGARQIDQVAADVL 200


>gi|315499862|ref|YP_004088665.1| thymidylate kinase [Asticcacaulis excentricus CB 48]
 gi|315417874|gb|ADU14514.1| thymidylate kinase [Asticcacaulis excentricus CB 48]
          Length = 212

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 9/217 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG EGAGK+T +  L   L+    +V  TREPGG+  AEA R +L++     +
Sbjct: 2   TGRFITFEGGEGAGKSTQVKALVAHLRELALEVVQTREPGGSSGAEALRDLLVTGEAGRW 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  AAR +H+E VIRPAL  G  ++CDRF DS+ AYQG         ++S+  
Sbjct: 62  SPMSETLMMYAARANHLEQVIRPALERGAWIVCDRFSDSTRAYQGAGGGVTPELIESIDA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V +  PD  I++D+P + GLKR     +L      + FE K +  HE+ R+ F   A 
Sbjct: 122 AVVADTQPDLVIVMDMPPEAGLKR-----ALARGDAENRFESKGLAFHERLREGFRRRAA 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
             P+R  ++D+  S + +  +    VW +V  R + L
Sbjct: 177 AHPERYRLIDADRSIEDIKAD----VWRVVSGRFAEL 209


>gi|254512028|ref|ZP_05124095.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11]
 gi|221535739|gb|EEE38727.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11]
          Length = 203

 Score =  142 bits (358), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 6/204 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEGI+G+GK+T   LL   L+R+ ++V +TREPGG+  AE  R+++L    D + A
Sbjct: 1   MFLTFEGIDGSGKSTQARLLAEHLRREGHEVILTREPGGSDGAEEIRNLVLQGDPDRWSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  + 
Sbjct: 61  ETEILLFTAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRGLVDQLHNLM 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    PD T+++D+    GL R + R    E      FE   + + ++ R  FL +A+  
Sbjct: 121 IGRE-PDLTLLIDMDPGTGLSRAKGRQGAEER-----FEDFGLDLQQQMRAGFLALAQEF 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            DR  +VD   +  SVA ++  +V
Sbjct: 175 SDRFRVVDGNRNMDSVAQDVTKVV 198


>gi|46446707|ref|YP_008072.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|59798299|sp|Q6MCA2|KTHY_PARUW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46400348|emb|CAF23797.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 225

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 2/209 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EF 62
           G FI+ EG EG+GK+T ++ L  + + K ++V  TREPGGT   E+ RH+LL+       
Sbjct: 8   GYFITIEGGEGSGKSTLLNQLGDYFRNKGFEVIQTREPGGTKLGESIRHLLLNHEDSISI 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G +AE ++F AAR  H+E +I+PAL  GKI+LCDRF DS+ AYQG         +    +
Sbjct: 68  GHQAELLLFLAARAQHIEELIQPALKAGKIVLCDRFNDSTIAYQGAARGLNAKKIQEFCQ 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   E++P+ T+ LD+  +IGL R Q    +  +   LD  E + +  HE+ RQ FL + 
Sbjct: 128 LVCAEILPNWTLFLDVSPEIGLARTQKIQKVHAQMGQLDRIESEKIEFHERVRQAFLSLV 187

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + +P R + +D+  S   V    L  + E
Sbjct: 188 QQEPQRIYRIDANESQSKVLQKALEFLEE 216


>gi|120554780|ref|YP_959131.1| dTMP kinase [Marinobacter aquaeolei VT8]
 gi|120324629|gb|ABM18944.1| thymidylate kinase [Marinobacter aquaeolei VT8]
          Length = 214

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 6/217 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T +    + L+R   D  VTREPGGTP AE+ R +LL+   +
Sbjct: 3   LARGRFITFEGTEGVGKSTQLDNAAKTLERLGIDYIVTREPGGTPMAESIRELLLAPREE 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++  AAR  H+ N I PAL  GK +LCDRF D+++AYQG         +  L
Sbjct: 63  SVHETTELLLMFAARAQHLHNRILPALSAGKWVLCDRFTDATFAYQGGGRGVSRERIALL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +   E+ PD  I+LD PV+ G+ R + R        LD FER+     ++ R+ +L+ 
Sbjct: 123 EALVQGEMRPDHVILLDAPVETGMARARKR------GELDRFEREAQAFFQRIRETYLER 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A   P R H+V++A   + V+ ++  ++  L +  VS
Sbjct: 177 ATEMPGRYHVVNAALPLEQVSESVSALLTALAKLPVS 213


>gi|213691095|ref|YP_002321681.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|254808279|sp|B7GT80|KTHY_BIFLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|213522556|gb|ACJ51303.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457150|dbj|BAJ67771.1| thymidylate kinase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 233

 Score =  142 bits (357), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 15/220 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL  GVD  
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTVLGKAIRQLLLH-GVDGG 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117
             +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +    +
Sbjct: 61  AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL   +   ++PD T +LD+   +   R+++     ESA  D+  R         RQ F
Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHNRLEHAEDRMESAGSDFQSRT--------RQAF 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           LD+A  +P+R H++D++ S + V + I   +  L++  V+
Sbjct: 172 LDLAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211


>gi|83954240|ref|ZP_00962960.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1]
 gi|83841277|gb|EAP80447.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1]
          Length = 212

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEGI+G+GK+T   LLK  L+   + V +TREPGG+P AE  R ++L    D + 
Sbjct: 7   GLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSPGAEEIRALVLQGDPDRWS 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E ++F AAR DH+E  I PAL  GKI++CDRF DS+  YQG         +D L  +
Sbjct: 67  ARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHSL 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  V PD T+++D+    GL R  +R ++ E      FE     +    R  FL +A  
Sbjct: 127 MIG-VEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAAE 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            PDR   ++ A S  +VA +++  V
Sbjct: 181 FPDRFVTINGAQSIDAVAADVIAQV 205


>gi|94496389|ref|ZP_01302966.1| Thymidylate kinase [Sphingomonas sp. SKA58]
 gi|94424135|gb|EAT09159.1| Thymidylate kinase [Sphingomonas sp. SKA58]
          Length = 208

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FIS EG EGAGK+T +  L R L+ +  DV  TREPGG+  AEA R +LL+ G D
Sbjct: 1   MTTGRFISLEGGEGAGKSTQLRALARTLRERGLDVLETREPGGSDGAEAIRTLLLTGGAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +   AEA++FAAAR DH+E  IRPAL  G  +L DRFLDSS AYQG+ + S    + +L
Sbjct: 61  RWSPRAEALLFAAARADHIEKTIRPALARGAWVLSDRFLDSSRAYQGQGELSDSDIV-AL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I   + +PD T++L LP         +R   R+   +D    +D   H      F   
Sbjct: 120 HRIGSADFLPDRTLVLTLPD----AVAADRARARDGDHVDRIGGRDSRFHHAVADAFARF 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  + +R   +D++ + ++V   +++ + +L+
Sbjct: 176 AAQESERVRAIDASGTTEAVTQRLVDALADLL 207


>gi|118594886|ref|ZP_01552233.1| thymidylate kinase [Methylophilales bacterium HTCC2181]
 gi|118440664|gb|EAV47291.1| thymidylate kinase [Methylophilales bacterium HTCC2181]
          Length = 204

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 124/204 (60%), Gaps = 9/204 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN  LFIS EG++GAGKTTHI  ++ + + K    ++TREPGGT   E  R +LL    +
Sbjct: 1   MNKPLFISLEGVDGAGKTTHIHFIEDYFRTKGLPFYMTREPGGTDLGEKLRLLLLH---E 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  E ++  AAR +H++ +I+P L +G  ++ DRF D++YAYQ          +D L
Sbjct: 58  EMDALTETMLMFAARCEHIQTIIKPKLDQGITVVSDRFTDATYAYQAGGKGVDARSIDVL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  +++ PD T + D+PV+I ++R      L+++  +D FER++ + H+  R  +LD+
Sbjct: 118 KSLVQKDLDPDLTFLFDVPVEISIER------LKDTRTMDKFEREEPIFHQSIRNAYLDL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A++ P R H+++  H+ +++   I
Sbjct: 172 AQSFPQRFHVLNGTHAIEAIQDEI 195


>gi|328950279|ref|YP_004367614.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
 gi|328450603|gb|AEB11504.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
          Length = 202

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 118/204 (57%), Gaps = 12/204 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG+GK+T  + L  +L+++   V VTREPGGTP   A R  LLS  +D
Sbjct: 1   MKPGFFITFEGPEGSGKSTQAAHLAAWLRQQGVSVVVTREPGGTPLGRAVRQWLLSESMD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E +++ A R +HV +VIRPAL  G++++ DRF+DSSYAYQG        +L ++
Sbjct: 61  PV---TEFLLYTADRAEHVRHVIRPALAAGQVVISDRFVDSSYAYQGFGRGLDLEWLRAV 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  ++ ++PD T +LDLP ++GL R   R         D  E++ +  H + R+ +  +
Sbjct: 118 SQPVLEGLVPDVTFLLDLPPEVGLARKAER---------DRLEQESLAFHRRVREGYRVL 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           AR +P R  ++D+    + +   +
Sbjct: 169 ARAEPQRFVVLDATQPPEVIVEQV 192


>gi|283783708|ref|YP_003374462.1| dTMP kinase [Gardnerella vaginalis 409-05]
 gi|283441867|gb|ADB14333.1| dTMP kinase [Gardnerella vaginalis 409-05]
          Length = 234

 Score =  142 bits (357), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 20/220 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFISFEGI+G GKTT +  LK +LQ    +V VTREPGGT   +  R +LL      
Sbjct: 28  NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118
             A  EA++FAA R  HV  VIRPAL  G +++ DR++DSS AYQ      + L +D   
Sbjct: 86  VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQA---GGRELTMDDVR 142

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L E +   + P+ T +LD+  +   KR+       ESA +D+  R         R+ FL
Sbjct: 143 TLSEWATDSLWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRT--------REAFL 194

Query: 179 DIARNQPDRCHIVDSAHS----FQSVATNILNIVWELVQK 214
           D+A+   DR  ++D+  S    F+ +  ++ N++ E+  K
Sbjct: 195 DLAQESADRYRVLDATFSAKSLFELIVQDVHNLIKEIETK 234


>gi|148553408|ref|YP_001260990.1| thymidylate kinase [Sphingomonas wittichii RW1]
 gi|166987709|sp|A5V3I6|KTHY_SPHWW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148498598|gb|ABQ66852.1| thymidylate kinase [Sphingomonas wittichii RW1]
          Length = 208

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 117/210 (55%), Gaps = 6/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GK+T    L   L+ +  DV  TREPGG+  AEA R +LL    D + 
Sbjct: 3   GRFITLEGGEGVGKSTQAKALAAALRARGLDVVETREPGGSDGAEAIRRLLLEGAADRWN 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AEA++FAAAR DHV   IRPA+  G+ ++CDRFLDSS AYQG  D      + +L  I
Sbjct: 63  ARAEALLFAAARADHVARTIRPAIEAGRWVVCDRFLDSSIAYQGGADGLGDEAIRTLHAI 122

Query: 124 SVQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                +PD T++LD+PV D   ++ +        A  D FE++D   H++    F  IA 
Sbjct: 123 GSAGYLPDRTLLLDMPVFDAAFRQAEAGI-----ANSDRFEKRDEAFHDRVADSFRRIAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P R   +++  S Q V   ++  + +L+
Sbjct: 178 QEPARIRTINAQGSPQEVTARLIEALADLL 207


>gi|323136277|ref|ZP_08071359.1| thymidylate kinase [Methylocystis sp. ATCC 49242]
 gi|322398351|gb|EFY00871.1| thymidylate kinase [Methylocystis sp. ATCC 49242]
          Length = 226

 Score =  141 bits (356), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/205 (45%), Positives = 125/205 (60%), Gaps = 2/205 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T ++ L   L+ +  +V  TREPGGTP AE  R VLLS  +   G
Sbjct: 10  GRFITFEGGEGAGKSTQLARLSEHLRGRGIEVVATREPGGTPKAEKLREVLLSGRIAPLG 69

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA +FAAAR+DHVE++I PAL  G  +L DRF DS+ AYQG R       +  L+  
Sbjct: 70  PLAEAALFAAARIDHVESLIAPALARGAWVLSDRFADSTRAYQGARGGVDDASISLLERA 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  V PD TIILDLP   GL R  +R +       D FE ++ + HE+ R+ FLDIA  
Sbjct: 130 AIGNVRPDLTIILDLPPQEGLARAASRRAA--GVAPDRFEAEEELFHEELRRAFLDIAEQ 187

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+RC +V+ A +   VA  I  +V
Sbjct: 188 EPERCCVVNGALAADEVAQAIRQLV 212


>gi|160893397|ref|ZP_02074183.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50]
 gi|156864972|gb|EDO58403.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50]
          Length = 211

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 14/211 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EG +GAGKTT I LLK +L +K YDV +TR+PGG   +EA R V+L+    E G
Sbjct: 6   GIFITMEGPDGAGKTTQIELLKDYLNKKGYDVLITRDPGGNAVSEAIREVILNKDFTEMG 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120
              E +++AAAR   V+  I+PAL  GK ++ DRF+DSS  YQG     + L +D+   +
Sbjct: 66  YMTELLLYAAARAQLVKENIKPALSAGKAVIADRFVDSSAVYQG---IGRGLGIDTVYKV 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++Q ++PD T ++DL  + G+ R +N+      A LD  E++ +  H+K  + +  +
Sbjct: 123 NEFALQGILPDMTFLMDLDAEAGIARKKNQ------AELDRMEQESLEFHKKVVEGYRCL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV--W 209
           A   PDR   VD+A   +++   I++ V  W
Sbjct: 177 AEMNPDRIVKVDAALPKEAIHDIIISYVEKW 207


>gi|158521178|ref|YP_001529048.1| dTMP kinase [Desulfococcus oleovorans Hxd3]
 gi|229500940|sp|A8ZXL3|KTHY_DESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|158510004|gb|ABW66971.1| dTMP kinase [Desulfococcus oleovorans Hxd3]
          Length = 214

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 110/202 (54%), Gaps = 1/202 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEGAGKTT +  L  FL++  +   VTREPGGT   +  R +LL     +   
Sbjct: 1   MFITLEGIEGAGKTTQLPRLVDFLEQHGHTCVVTREPGGTGMGQKIRSLLLDPDNSDMSP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  ++AA R  HV  +I PAL EGK ++CDRF D++  YQG         +  L  ++
Sbjct: 61  ETELFLYAADRAQHVRRLIEPALAEGKTVVCDRFADATEVYQGWARGLDMELVQVLNRVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
                PD T++ DLP + GLKR   R +       D  FE + +  HE+ R  +LD+AR 
Sbjct: 121 TGGRKPDITLLFDLPPEAGLKRAWQRIARNGKEAADCRFENEKMAFHERVRHGYLDLARR 180

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
           +P+R  ++D+      VA  ++
Sbjct: 181 EPERFVVIDALGPAAEVAGRMI 202


>gi|89053768|ref|YP_509219.1| thymidylate kinase [Jannaschia sp. CCS1]
 gi|122499181|sp|Q28SW8|KTHY_JANSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|88863317|gb|ABD54194.1| thymidylate kinase [Jannaschia sp. CCS1]
          Length = 208

 Score =  141 bits (356), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 6/204 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFIS EGI+G+GK+T  + L  +L+ +  D   TREPGG+  AE  R +L+    D + A
Sbjct: 4   LFISLEGIDGSGKSTQTARLVDWLRVRGRDPLQTREPGGSEGAEEIRRLLVEGDPDRWSA 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++F AAR DH+E  IRPAL  G+ ++ DRF DS+  YQG    +    +D +   +
Sbjct: 64  ETEILLFTAARRDHLERTIRPALASGRDVVTDRFADSTRVYQGATRGALRGLVDRIHAEA 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           + E  PD T+ILD+  ++ L R      L   +  D FE   +   +K R  F  +AR  
Sbjct: 124 I-EAEPDLTLILDMDPELALSR-----GLARDSGEDRFEDFGLPFQQKLRAGFQALAREY 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           PDRCHIVD++    ++A  I  IV
Sbjct: 178 PDRCHIVDASADPDAIAHTIQTIV 201


>gi|169830255|ref|YP_001716237.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C]
 gi|226732654|sp|B1I165|KTHY_DESAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169637099|gb|ACA58605.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C]
          Length = 221

 Score =  141 bits (355), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 8/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG+FI FEGI+GAGKTT ++ L +  L  +N+ V VTREPGGT   EA R VLL  G  E
Sbjct: 2   SGVFIVFEGIDGAGKTTQLAYLHEALLSMRNHRVLVTREPGGTRIGEAVRRVLLDTGNSE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA+++AAAR      V+RPAL  G+I+L DRFLDSS AYQG     +   L  + 
Sbjct: 62  MTGETEALLYAAARSQFTAEVVRPALARGEIVLSDRFLDSSLAYQGFGRGLELHRLRQVN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++   + PD T++LDLPV   + R+            D  ER+ V   E+ R+ +L++A
Sbjct: 122 FLATGGLRPDLTVLLDLPVAAAVARMDPDRR-------DRLEREGVDFFERVRRGYLELA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              P    IV++       A+ I   V  L+Q R
Sbjct: 175 SADPGHYLIVNAEREAGVCASAIWARVRALLQDR 208


>gi|303248931|ref|ZP_07335178.1| thymidylate kinase [Desulfovibrio fructosovorans JJ]
 gi|302489654|gb|EFL49590.1| thymidylate kinase [Desulfovibrio fructosovorans JJ]
          Length = 211

 Score =  141 bits (355), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 113/215 (52%), Gaps = 7/215 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T I+LLK  L+     V  TR+PGG P  E  R +LLS        
Sbjct: 1   MFITFEGIEGSGKSTQITLLKSALEATGKSVVTTRQPGGCPLGETLRSILLSTQTKNLDH 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A R  H+  VIRPA   G I+LCDRF DS+  YQG         L  L +I+
Sbjct: 61  RAELFLYLADRAQHIAEVIRPAQNAGHIVLCDRFADSTVVYQGYGRGLDVAMLHELNDIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFLDIAR 182
           V    P  TI+LDL  + GL+R   R +L+   C     FE +D+  H + R  +L +A 
Sbjct: 121 VAGAWPQRTILLDLDPEQGLRRALAR-NLKTGNCATEGRFEAEDIDFHTRIRDGYLALAS 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             P R  ++D+     +VA      VW  V  R+S
Sbjct: 180 LHPRRYAVIDATPDVATVA----KAVWAAVSSRMS 210


>gi|152996289|ref|YP_001341124.1| dTMP kinase [Marinomonas sp. MWYL1]
 gi|189028836|sp|A6VXL0|KTHY_MARMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150837213|gb|ABR71189.1| dTMP kinase [Marinomonas sp. MWYL1]
          Length = 212

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FIS EG EG+GKTT I  ++++L        +TREPGGTP AE  R ++L+   +   
Sbjct: 3   GKFISLEGGEGSGKTTAIHFIRQWLDDHKIPYIMTREPGGTPLAEEIRQLVLTPRDESVN 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR  H+   I+PAL +G  ++ DRFLDSSY YQG+        LD L   
Sbjct: 63  DVTELLLVFAARAQHLAEKIQPALEKGTWVISDRFLDSSYVYQGKARGGDIAMLDQLANW 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V +  PD T++LD+PV++G +RV  R         D  +++    H+K R  FL+ A  
Sbjct: 123 VVGDNKPDATLVLDVPVELGQERVVQRQH------QDRLDKESFAFHQKVRDGFLERAEA 176

Query: 184 QPDRCHIVDSAHSFQSVATNI------LNIVW 209
            P R  IVD++ S +SV + I      LN  W
Sbjct: 177 DPKRVKIVDASQSLESVKSQIEEQLAKLNEAW 208


>gi|254439317|ref|ZP_05052811.1| thymidylate kinase [Octadecabacter antarcticus 307]
 gi|198254763|gb|EDY79077.1| thymidylate kinase [Octadecabacter antarcticus 307]
          Length = 223

 Score =  141 bits (355), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 112/202 (55%), Gaps = 12/202 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           GLFISFEGI+G+GK+T   LLK RF      D  +TREPGG+  AE  R +LL+   D +
Sbjct: 22  GLFISFEGIDGSGKSTQTKLLKDRF-----PDAVLTREPGGSAGAEEIRALLLTGDPDRW 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  GK ++CDRF DS+  YQG    +    +D+L +
Sbjct: 77  SAETEILLFTAARRDHLEKTILPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHD 136

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T I+D+   I L R      L   +  D FE   +   E  R  FL +A+
Sbjct: 137 VMIGR-EPDLTFIIDMDPGIALSR-----GLARGSGEDRFEDMGLAFQETLRHGFLALAK 190

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             PDRC ++D      +VA  I
Sbjct: 191 ANPDRCVLIDGNRDPVAVAAEI 212


>gi|78485063|ref|YP_390988.1| thymidylate kinase [Thiomicrospira crunogena XCL-2]
 gi|78363349|gb|ABB41314.1| thymidylate kinase [Thiomicrospira crunogena XCL-2]
          Length = 219

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 79/201 (39%), Positives = 114/201 (56%), Gaps = 7/201 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG F++ EG EG GK+T++  ++++L   N DV VTREPGGT  +EA R +LL     E 
Sbjct: 11  SGKFLTLEGTEGGGKSTNLVFIQQWLADHNIDVVVTREPGGTAVSEAVREILLDKQYSEM 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR  H++  I PAL  GK ++ DRF D+SYAYQG    ++ +  D + E
Sbjct: 71  TPETELLLMFAARNQHLQEKILPALAAGKWVVSDRFTDASYAYQG---GARGIAYDRIAE 127

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I     Q   PD T + DLP++ G+KRV  R  L   A +D FE++ +   EK R  +L 
Sbjct: 128 IENWVQQGCYPDMTFVFDLPIEEGMKRVAARSKLSGQA-IDRFEQEKMEFFEKVRAAYLY 186

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
            A   P R  ++++A     V
Sbjct: 187 RAEQAPQRYCVLNAARPLNEV 207


>gi|331000633|ref|ZP_08324288.1| dTMP kinase [Parasutterella excrementihominis YIT 11859]
 gi|329570905|gb|EGG52613.1| dTMP kinase [Parasutterella excrementihominis YIT 11859]
          Length = 202

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 119/205 (58%), Gaps = 11/205 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+T   ++   L+ +  D  +TREPGG  +AE  R +LL+   +   
Sbjct: 5   GKFITVEGVDGAGKSTQFEVIANALKERGIDFVMTREPGGPQSAEKIRELLLN---EPMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+ E +V  AAR +++  +IRPAL  GK +LCDRF D+S AYQG         ++ L   
Sbjct: 62  AKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLANF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T+I DLP ++   R+  +        LD FE++D   H + RQ +L+IA+ 
Sbjct: 122 VHPDIKPDKTVIFDLPTEVAAARLSRK--------LDRFEQEDADFHRRVRQGYLEIAKR 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+RC ++D+  + + V+  +L  V
Sbjct: 174 EPERCVVIDAQGTPEEVSARVLKEV 198


>gi|118586633|ref|ZP_01544073.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163]
 gi|118432948|gb|EAV39674.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163]
          Length = 213

 Score =  140 bits (354), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 126/214 (58%), Gaps = 11/214 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           M  G FI+ EG +GAGKT+ +  L   L+    D  + TREPGG   +EA R ++L    
Sbjct: 1   MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E     EA++FAAAR  H+   I PAL +GKI+L DRF+DSS AYQG     + L +++
Sbjct: 61  PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQG---GGRELGIEA 117

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + EI   +   + P+ T++LDLP ++G+ R+        S  ++  ++  ++ H+K RQ 
Sbjct: 118 VSEINNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQT 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +L +A++QP+R  ++D+  S + +A N L ++ E
Sbjct: 174 YLQLAKDQPNRIKVLDATQSPEKIAINALQLIQE 207


>gi|94499607|ref|ZP_01306144.1| thymidylate kinase [Oceanobacter sp. RED65]
 gi|94428361|gb|EAT13334.1| thymidylate kinase [Oceanobacter sp. RED65]
          Length = 206

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+ EG+EG GKTT+I  +K +LQ +  D  VTREPGGT   E+ R++LL    D
Sbjct: 1   MQAGLFITVEGVEGVGKTTNIEYIKNWLQHQGIDYVVTREPGGTDLGESLRNLLLHG--D 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +AE ++  AAR  H+E VI+PAL  G+ +LCDRF DS++AYQG        ++  L
Sbjct: 59  DVSDKAELLMMFAARSQHIEKVIKPALAAGRWVLCDRFTDSTFAYQGGGRQLNPEWIRQL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  +E+ PD T +LD PV+IG             +  D  E +D++   + R  FL  
Sbjct: 119 ETLVQEELQPDVTFLLDCPVEIGRA------RAAARSASDRIESQDLVFFNRVRDAFLHR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A +  DR  ++D++     V   I +++ EL
Sbjct: 173 A-SLYDRFRVIDASQDLLQVQQQIESVLVEL 202


>gi|308171919|ref|YP_003918624.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7]
 gi|307604783|emb|CBI41154.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7]
 gi|328551729|gb|AEB22221.1| thymidylate kinase [Bacillus amyloliquefaciens TA208]
 gi|328909989|gb|AEB61585.1| thymidylate kinase [Bacillus amyloliquefaciens LL3]
          Length = 212

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  + + V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKDILSAEGHPVTATREPGGIDIAEQIREVILNKNNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
            A+ EA+++AAAR  H+   ++PAL EG+I+LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DAKTEALLYAAARRQHLVEKVQPALKEGRIVLCDRFIDSSLAYQG---YARGLGIDEVFS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   ++ + MPD TI   +  + GLKR+ +  S RE   LD    + +  H K R+ +  
Sbjct: 119 INRFAIGDTMPDVTIYFSIDPEEGLKRITSNDS-REKNRLDL---EALHFHTKVREGYQK 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P+R H +D++   + V  + L ++ E ++K
Sbjct: 175 VMQRFPERFHTIDASRKKEFVIQDALQVINEALKK 209


>gi|110680630|ref|YP_683637.1| thymidylate kinase [Roseobacter denitrificans OCh 114]
 gi|109456746|gb|ABG32951.1| thymidylate kinase [Roseobacter denitrificans OCh 114]
          Length = 212

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G FI+FEGI+G+GK+T    L   L+   ++V  TREPGG+P AE  R ++L    D 
Sbjct: 7   DTGFFITFEGIDGSGKSTQSKRLAAHLRASGHEVVETREPGGSPGAEEIRALVLQGDPDR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+  YQG         +D+L 
Sbjct: 67  WSAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLH 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E+ +    PD T+++D+   IGL R  +R +  E      FE     +  + R  FL +A
Sbjct: 127 ELMIGR-EPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQTRMRAGFLALA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    R  +VD      SVA  ++ IV
Sbjct: 181 QEFKARFRLVDGGRDADSVAAEVIKIV 207


>gi|77165137|ref|YP_343662.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707]
 gi|76883451|gb|ABA58132.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707]
          Length = 206

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EGIEGAGK+T +  +++ LQ    +V VTREPGGT   E  R +LLS  ++   A+ E 
Sbjct: 2   LEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLEGMSADTEL 61

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           ++  AAR++HV+ VI PAL  GK +LCDRF  +SYAYQG         +  L+  ++  +
Sbjct: 62  LLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKLESWALNCL 121

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD  ++ D+PV +GL+R   R        LD FE++ +   ++ R I+L +A+  PD+ 
Sbjct: 122 RPDLILLFDVPVRLGLQRATTR-----CQQLDRFEQEKIDFFDRARTIYLSLAKKYPDQY 176

Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214
            ++DS+     V   I  ++   +++
Sbjct: 177 RLIDSSLPLTRVQEAIQKVIMAFLEE 202


>gi|46580545|ref|YP_011353.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough]
 gi|59798319|sp|Q72A57|KTHY_DESVH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46449964|gb|AAS96613.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234283|gb|ADP87137.1| thymidylate kinase [Desulfovibrio vulgaris RCH1]
          Length = 224

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 3/206 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T +  L  +LQ++ + V VTREPGG+      R +LL  G  +   
Sbjct: 1   MFITFEGIEGSGKSTALQGLAAWLQQRGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  V+RPAL EG ++L DR+ DS+  YQG       + L    +++
Sbjct: 61  EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHEKRRQIFLDIAR 182
           V  + PD TI+LDL  + GL R   R ++RE   A    FE + +  H + R+ +L  A 
Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALAR-NIREGMHAAEGRFEAESLAFHTRVREGYLTWAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
               R  +VD+  S + V  +++ IV
Sbjct: 180 LHGGRYRVVDATQSPEDVVRDVVGIV 205


>gi|145589149|ref|YP_001155746.1| dTMP kinase [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047555|gb|ABP34182.1| thymidylate kinase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 214

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 126/221 (57%), Gaps = 24/221 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCG 58
           +  G FISFEGI+GAGK+THI   K+ +Q +  D  V +TREPGGTP  E  R++LL   
Sbjct: 6   LYPGFFISFEGIDGAGKSTHIESFKKLMQERYPDREVVMTREPGGTPLGEQLRNLLLDAP 65

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           ++    E EA++  AAR +H+  +I PAL+ GKI++ DRF D+S+AYQG     + L L 
Sbjct: 66  MN---LETEALLMFAARREHIAQIIEPALLAGKIVISDRFTDASFAYQG---GGRGLSLA 119

Query: 119 SLQEIS--VQE------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            L ++   VQ       + P+ TI+ DLP +I   R   R  +R     D FE+ D++  
Sbjct: 120 KLNDLEQWVQGRADGKLLQPNLTILFDLPGEIAQAR---RSKVRTP---DKFEKLDLVFF 173

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI--LNIVW 209
           EK RQ +L  A   P R H VD+  + +++   +  L I W
Sbjct: 174 EKVRQEYLRRALEDPSRFHKVDATQTPEAIWNGLQALEINW 214


>gi|298252464|ref|ZP_06976259.1| thymidylate kinase [Gardnerella vaginalis 5-1]
 gi|297533354|gb|EFH72237.1| thymidylate kinase [Gardnerella vaginalis 5-1]
          Length = 234

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 16/218 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFISFEGI+G GKTT +  LK +LQ    +V VTREPGGT   +  R +LL      
Sbjct: 28  NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
             A  EA++FAA R  HV  VIRPAL  G +++ DR++DSS AYQ G R+ ++   + +L
Sbjct: 86  VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQAGGRELTKD-DVRTL 144

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +   + P+ T +LD+  +   KR+       ESA +D+  R         R+ FLD+
Sbjct: 145 SEWATDSLWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRT--------REAFLDL 196

Query: 181 ARNQPDRCHIVDSAHS----FQSVATNILNIVWELVQK 214
           A+   DR  ++D+  S    F+ +  ++ N++ E+  K
Sbjct: 197 AQESADRYRVLDATFSAKSLFELIVQDVHNLIKEIETK 234


>gi|291455870|ref|ZP_06595260.1| dTMP kinase [Bifidobacterium breve DSM 20213]
 gi|291382279|gb|EFE89797.1| dTMP kinase [Bifidobacterium breve DSM 20213]
          Length = 206

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 15/215 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL  GV+E 
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAVRQLLLH-GVNEG 60

Query: 63  GAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117
            A+    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +    +
Sbjct: 61  AADIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTSE-EI 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL   +   ++PD T +LD+   +   R+++     ESA  D+  R         RQ F
Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPTLSHNRLEHAEDRMESAGDDFQSRT--------RQAF 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD+A  +P+R  ++D++ S + V   I   + EL 
Sbjct: 172 LDLAAVEPNRFRVIDASQSIEQVWAAIEADIKELA 206


>gi|300114110|ref|YP_003760685.1| thymidylate kinase [Nitrosococcus watsonii C-113]
 gi|299540047|gb|ADJ28364.1| thymidylate kinase [Nitrosococcus watsonii C-113]
          Length = 210

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 117/203 (57%), Gaps = 5/203 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EGIEGAGK+T ++ +++ LQ    +V VTREPGGT   E  R +LLS  ++   A+
Sbjct: 3   FIALEGIEGAGKSTQLTFIQQLLQSAGKNVVVTREPGGTLLGEQIRELLLSPRLESMSAD 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR++HV+ VI PAL  GK +LCDRF  +SYAYQG         + +L+  ++
Sbjct: 63  TELLLMFAARVEHVQQVILPALAAGKWILCDRFTSASYAYQGGGRKLPLSRIATLESWAL 122

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD  ++ D+P  +GL+R   R        LD FE++ +   ++ R  +L +A+  P
Sbjct: 123 NGLRPDLILLFDVPARLGLQRAATR-----CQQLDRFEQEKIDFFDRVRMTYLSLAKRYP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
            +  ++DS+     V   I  ++
Sbjct: 178 AQYCLIDSSLPLLKVQEAIQKVM 200


>gi|116491390|ref|YP_810934.1| thymidylate kinase [Oenococcus oeni PSU-1]
 gi|290890956|ref|ZP_06554020.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429]
 gi|122276428|sp|Q04E53|KTHY_OENOB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116092115|gb|ABJ57269.1| thymidylate kinase [Oenococcus oeni PSU-1]
 gi|290479355|gb|EFD88015.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429]
          Length = 213

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 126/214 (58%), Gaps = 11/214 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           M  G FI+ EG +GAGKT+ +  L   L+    D  + TREPGG   +EA R ++L    
Sbjct: 1   MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E     EA++FAAAR  H+   I PAL +GKI+L DRF+DSS AYQG     + L +++
Sbjct: 61  PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQG---GGRELGIEA 117

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + EI   +   + P+ T++LDLP ++G+ R+        S  ++  ++  ++ H+K RQ 
Sbjct: 118 VGEINNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQT 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +L +A++QP+R  ++D+  S + +A N L ++ E
Sbjct: 174 YLQLAKDQPNRIKVLDATQSPEKIAINALQLIQE 207


>gi|258405528|ref|YP_003198270.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692]
 gi|257797755|gb|ACV68692.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692]
          Length = 215

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 117/205 (57%), Gaps = 1/205 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T  +LL ++L+   ++V  TREPGG+   +  R +LLS    +   
Sbjct: 1   MFITFEGIEGCGKSTQSTLLAQWLKNHGWEVQTTREPGGSRLGQNLRSILLSMESRDLTG 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E+E  ++ A R  HV   I+PAL +G ++L DRF DS+  YQG         L +L +++
Sbjct: 61  ESELFLYLADRAQHVHQTIKPALDKGAVVLSDRFADSTVVYQGYGRGLDPNLLHTLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           VQ V PD T++ DLPV++GLKR   R +   ++     FE + +  H + R+ +L  A  
Sbjct: 121 VQGVWPDLTLLFDLPVELGLKRAMARNFQDNKTEQEGRFEAESLAFHSRVREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             +R  +VD+    +++   +  I+
Sbjct: 181 NKNRFQVVDAEPDPETIFNEVQRIL 205


>gi|23336149|ref|ZP_00121376.1| COG0125: Thymidylate kinase [Bifidobacterium longum DJO10A]
 gi|189440137|ref|YP_001955218.1| thymidylate kinase [Bifidobacterium longum DJO10A]
 gi|238692075|sp|B3DUA1|KTHY_BIFLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189428572|gb|ACD98720.1| Thymidylate kinase [Bifidobacterium longum DJO10A]
          Length = 206

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 15/215 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL  GVD  
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117
             +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +    +
Sbjct: 61  AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL   +   ++PD T +LD+   +   R+++     ESA  D+  R         RQ F
Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHNRLEHAEDRMESAGSDFQSRT--------RQAF 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD+A  +P+R  ++D++ S ++V   I + + EL 
Sbjct: 172 LDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206


>gi|82702516|ref|YP_412082.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196]
 gi|123544544|sp|Q2Y981|KTHY_NITMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|82410581|gb|ABB74690.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196]
          Length = 205

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 13/204 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EGI+GAGKTTH+  L+ FL+ +  +V VTREPGGTP  EA R +LL        
Sbjct: 3   GKFITLEGIDGAGKTTHLRWLEYFLKERGKNVMVTREPGGTPLGEALRDILLDS-RQTMH 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE EA++  AAR +H++ VI PAL  G+ ++ DRF D+S+AYQG     + L L  L E+
Sbjct: 62  AETEALLMFAARREHLDKVILPALSRGEWVISDRFTDASFAYQG---GGRGLSLQKLNEL 118

Query: 124 S--VQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              VQ E  PD T+ LD+ +  G +R  N   +R++   D FE++      + R+ +L+ 
Sbjct: 119 ECWVQGEFQPDVTLYLDVSIASGRQRTSN---IRQA---DRFEKEQDEFFRRVREAYLER 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A+  P+R  ++D+  S + V  ++
Sbjct: 173 AKEFPERIRVIDANQSLEDVRRSV 196


>gi|27262450|gb|AAN87506.1| Thymidylate kinase [Heliobacillus mobilis]
          Length = 241

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 117/216 (54%), Gaps = 13/216 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +GAGKTT  +LL +  +   Y V  TREPGGTP  EAAR VLL   +    
Sbjct: 31  GLFITLEGADGAGKTTQGALLAQAFRALQYPVLETREPGGTPVGEAARRVLLDPSLTGMA 90

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE  ++AAAR   +  VI PAL  G +++CDRF DS+ AYQG     + L +D LQ I
Sbjct: 91  PMAEVFLYAAARAQLIREVILPALAAGTVVICDRFTDSTLAYQG---YGRGLDMDRLQSI 147

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + + + PD T++LD+  D GL R + + +       D  E +    H+K R  FL++
Sbjct: 148 NHWATEGLAPDLTLLLDIDSDEGLSRARRKGA-------DRMEMETAAFHQKVRHGFLEL 200

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           A  +  R  ++ +      V   ++N V E V + V
Sbjct: 201 AAKETSRIRVIPAGRDIFEVHRQVINAVREKVPELV 236


>gi|295402004|ref|ZP_06811966.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976006|gb|EFG51622.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 210

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F SFEG EGAGKTT I++L+ FL+ K +DV  TREPGG   AE  R ++L+    E  
Sbjct: 3   GRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEMD 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AAAR  H+   I PA+  GKI+LCDRF+DSS AYQG    ++ L +D + +I
Sbjct: 63  GRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQG---FARELGMDEILQI 119

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++    P  TI  D+   IGL+R+Q     RE   LD    +++  H K R+ +L +
Sbjct: 120 NQFAIDGYFPTLTIYFDIDPKIGLERIQKNKQ-REMNRLDM---ENLSFHYKVREGYLKL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A+   DR   +D++ S   V    +  + + + +R
Sbjct: 176 AKRFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210


>gi|330994629|ref|ZP_08318552.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1]
 gi|329758270|gb|EGG74791.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1]
          Length = 213

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 7/214 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG EGAGK+T   LL   L+   +DV +TREPGGT AAEA R  LL  G D   
Sbjct: 3   GLFITFEGGEGAGKSTQARLLADHLRAHGHDVDLTREPGGTEAAEALRDFLLFGGHD-LS 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQE 122
           A AE +   AAR DHV+  I PAL +G+I++CDRF DS+ AYQG   S +    LD + +
Sbjct: 62  ARAEVLTHFAARADHVDRRILPALAQGRIVVCDRFADSTEAYQGYGVSHADTGLLDMIGQ 121

Query: 123 I-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  V PD T +L +P D+   R++ R   R     D +E +D   H +    F  IA
Sbjct: 122 LRAMLPVQPDLTFVLQVPPDVARDRLRQRADGRA----DRYEAEDAAFHARVAAGFDAIA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           R    RCH +D++     V   I  ++   +  R
Sbjct: 178 RRDAARCHRIDASGDAGGVQQAIRAVLAPRLAGR 211


>gi|308271741|emb|CBX28349.1| Thymidylate kinase [uncultured Desulfobacterium sp.]
          Length = 216

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 1/202 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GKTT I     FL++K  D  +TREPGGT   +  R +LL    +    
Sbjct: 11  MFITFEGIEGSGKTTQIRHAMEFLKQKGKDCLMTREPGGTITGQKIRSILLDPESNGMDP 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E +++ A R +HV  +I PAL  GK +LCDR+ D++ AYQG         LD L ++ 
Sbjct: 71  STELLLYFADRAEHVNKIINPALSAGKTVLCDRYYDATKAYQGFARGLNMDLLDRLHKLI 130

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDIARN 183
           + ++ PD TI+LDL    GL R   + +  + A ++  FE++ +  H+K R  +L++AR 
Sbjct: 131 IHDLKPDITILLDLDPKTGLSRAWKQINEGQRAGVETRFEKETLDFHDKVRNGYLELARI 190

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
           +  R  I+D+++    V  +I+
Sbjct: 191 EAKRFKIIDASNDENQVKKDII 212


>gi|149201816|ref|ZP_01878790.1| thymidylate kinase [Roseovarius sp. TM1035]
 gi|149144864|gb|EDM32893.1| thymidylate kinase [Roseovarius sp. TM1035]
          Length = 208

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF+SFEGI+G+GK+T    L   L+ K  DV +TREPGG+P AE  R ++L    D 
Sbjct: 3   GQGLFLSFEGIDGSGKSTQARRLAETLRAKGRDVVLTREPGGSPGAEEIRRLVLEGDKDR 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E VI PAL  G +++CDRF DS+  YQG   +     +D L 
Sbjct: 63  WSAETEILLFTAARRDHLERVIAPALARGAVVICDRFADSTRMYQGLGRADLRGIVDQLH 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD T+++D+   +GL R  +R    + A  + F      +  + R  FL ++
Sbjct: 123 ALMIGR-EPDLTVLIDIDPGVGLGRALSRGG--DEARFESFGEG---MQARMRTGFLALS 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           +  P R  ++D A    +VA ++  +V
Sbjct: 177 QEFPARFTVIDGARDMDAVAEDVARVV 203


>gi|159043474|ref|YP_001532268.1| dTMP kinase [Dinoroseobacter shibae DFL 12]
 gi|254808289|sp|A8LRW0|KTHY_DINSH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157911234|gb|ABV92667.1| dTMP kinase [Dinoroseobacter shibae DFL 12]
          Length = 207

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 6/204 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  ISFEGI+G+GK+T    L   L+    D  +TREPGG+P AE  R +L+    D 
Sbjct: 3   QPGRLISFEGIDGSGKSTQARRLAEHLRDTGRDPLLTREPGGSPGAEDIRRLLVEGDPDR 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  E E ++F AAR DH+E +I+PAL EG+ ++ DRF DS+  YQG         +D L 
Sbjct: 63  WSPETELLLFTAARRDHLERLIQPALAEGRDVITDRFADSTRVYQGATRGDLRALVDQLH 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD T ++D+P ++ L R      L  ++  D FE   +      R  FLD+A
Sbjct: 123 SLMIGR-EPDLTFVIDMPPELALTR-----GLARASGEDRFEEFGLPFQTALRAGFLDLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205
           R  PDRC ++D       VA +++
Sbjct: 177 RANPDRCVVIDGNRPEAEVAADVI 200


>gi|294083926|ref|YP_003550683.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663498|gb|ADE38599.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 214

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 7/215 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           SG+ I+FEG EG+GKTT I  L ++L+ +  N ++ VTREPGGT  AE  R +L+    D
Sbjct: 2   SGILITFEGGEGSGKTTQIQSLVKWLESEFSNTELVVTREPGGTEGAELIRDLLVRGASD 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    EA++ +A+R +H++NVI PAL + KI++ DRF DS+  YQG         + +L
Sbjct: 62  RWQPITEALLMSASRHEHIKNVIEPALAQNKIVISDRFFDSTTIYQGIVGGVDAQAVATL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +++   V+PD T ++D+   +GL R  NR           FE K +  H+K R  FL +
Sbjct: 122 TKLACGNVIPDLTFLMDMDAKVGLARAGNRDDDET-----RFEEKGLSFHQKVRDAFLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A    +R  IVD+  +   +A  I N V  LV  +
Sbjct: 177 AHMNENRFVIVDATKTTSEIADIIRNKVATLVAMK 211


>gi|254283811|ref|ZP_04958779.1| thymidylate kinase [gamma proteobacterium NOR51-B]
 gi|219680014|gb|EED36363.1| thymidylate kinase [gamma proteobacterium NOR51-B]
          Length = 208

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 6/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G F++ EG EG GK+T++  + + L+ +  D+ VTREPGGTP AEA R +L+S   D
Sbjct: 1   MKPGQFLTVEGGEGVGKSTNLDFIAKTLRAQGIDLVVTREPGGTPLAEALRALLISDSED 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++  AAR  H+  VI PAL  G+ +LCDRF D+++AYQG     +   +++L
Sbjct: 61  PPCPNAELLMIFAARAQHLSTVIEPALKAGRWVLCDRFTDATFAYQGAGRGIEWSSIETL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +   +  PD T++LD+   IG+ R  +R        LD FER+ +   ++ R+ +   
Sbjct: 121 ENLIQGDRRPDLTLLLDMEPAIGMDRAGSR------GALDRFEREALPFFDRVRRGYKTR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  ++D++ S  +V  +I  ++ EL
Sbjct: 175 AAQAPHRYRVIDASQSIDAVQRDIARVLAEL 205


>gi|297566850|ref|YP_003685822.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
 gi|296851299|gb|ADH64314.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
          Length = 202

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 20/207 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVD 60
           SG FI+FEG EGAGK+T + LL  +L+ +  +V +TREPG  G    E  R VLLS   +
Sbjct: 2   SGWFITFEGPEGAGKSTQVKLLAPWLEAQGREVVLTREPGNGGWLGVEVRRLVLLS---E 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EAE ++++A R +HV  VI PAL  GK++LCDR+LDSS AYQG     + L L  L
Sbjct: 59  PMSPEAEYLLYSADRAEHVRRVIAPALAAGKVVLCDRYLDSSLAYQG---YGRGLDLGWL 115

Query: 121 QEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + ++V   Q + P  T +LDLP ++GL R   R         D  ER+ +  H++ R  +
Sbjct: 116 RAVAVGVTQGLKPHRTFLLDLPPEVGLARFAGR---------DRLEREPLEFHQRVRAGY 166

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L++A+ +P R  ++D+  S +++   +
Sbjct: 167 LELAKAEPQRFVVLDATQSPEAIQAEL 193


>gi|229917431|ref|YP_002886077.1| thymidylate kinase [Exiguobacterium sp. AT1b]
 gi|259494270|sp|C4KZW9|KTHY_EXISA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229468860|gb|ACQ70632.1| thymidylate kinase [Exiguobacterium sp. AT1b]
          Length = 212

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 120/215 (55%), Gaps = 12/215 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+ EG +G+GK+T + LL   L++K YD+ VTREPGGT      R VLLS    E 
Sbjct: 2   SGMFITVEGPDGSGKSTQLQLLVENLKQKGYDIVVTREPGGTTVGNQIREVLLSPDHHEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDS 119
               E +++AA+R  +VE VIRPAL  G I+LCDRF+D+S AYQG   + D  Q   + S
Sbjct: 62  TPRVEMMLYAASRAQNVEQVIRPALERGAIVLCDRFIDASIAYQGYGLQYDLDQ---IRS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T + DL  +    R+++R        LD  E +D   HE+    F  
Sbjct: 119 LNEWATNGLTPDLTFLFDLNPERASARMKDR------GQLDRIESRDQAFHERVYAGFQT 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P+R   +D+  S + +   +L+   E +Q+
Sbjct: 173 LLKQYPERIVRIDADQSIECIQDEVLDYTIERLQQ 207


>gi|218781657|ref|YP_002432975.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01]
 gi|218763041|gb|ACL05507.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01]
          Length = 220

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 9/223 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EGIEGAGKTT +  +  F++ + Y+   TREPGGT      R +LL+       
Sbjct: 5   GVFITLEGIEGAGKTTQVGRILEFMESQGYECISTREPGGTGIGAKIRAILLNSEHVTLA 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ A R  H+  +I+PAL  GK ++CDRF D++ AYQG        F++ L   
Sbjct: 65  PLAELLLYEADRAQHLARLIKPALEAGKCVVCDRFCDATTAYQGYARELSLDFINELHAR 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIAR 182
            +  + PD T++ DLP +IGL R + R   + +   +  FE +D+  H K RQ +L +A+
Sbjct: 125 ILDGLTPDLTLLFDLPAEIGLSRAKTRLHEQNNTSQEGRFEAEDLAFHRKVRQGYLTLAK 184

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
            +P R  IV+        A    + VWE  ++ ++  ++K+++
Sbjct: 185 AEPGRFAIVN--------ADAAPDRVWEETKELLAEFTAKRNL 219


>gi|126729338|ref|ZP_01745152.1| thymidylate kinase [Sagittula stellata E-37]
 gi|126710328|gb|EBA09380.1| thymidylate kinase [Sagittula stellata E-37]
          Length = 212

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 119/217 (54%), Gaps = 14/217 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SGLF+SFEGI+G+GK+T   +L   L        +TREPGG+P AE  R ++L    D 
Sbjct: 6   HSGLFLSFEGIDGSGKSTQARMLAERLSADGMTALLTREPGGSPGAEEIRALVLQGDPDR 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLD 118
           +  E E ++F AAR DH+E  IRPAL  G++++CDRF DS+  YQG    RD+     +D
Sbjct: 66  WSPETELLLFTAARRDHMERTIRPALTRGEVVICDRFADSTRLYQGRQGLRDT-----VD 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L  + +  + PD TIILD+  + GL R + R +  E      FE   + +  + R  FL
Sbjct: 121 KLHNLMIG-MEPDLTIILDMDPEAGLSRAKARATAEER-----FEDFGIALQLQMRAGFL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            ++   P R  ++D     + VA +I   V E +  R
Sbjct: 175 ALSEEFPARIRVIDGNRRPEYVAADIHATVMEALDAR 211


>gi|84686498|ref|ZP_01014391.1| thymidylate kinase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665411|gb|EAQ11888.1| thymidylate kinase [Rhodobacterales bacterium HTCC2654]
          Length = 207

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 108/191 (56%), Gaps = 6/191 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEGI+G+GK+T   LL   L+ +  DV  TREPGG+P AE  R ++L    D +
Sbjct: 2   TGHFITFEGIDGSGKSTQARLLAEALKAEGRDVVATREPGGSPGAEEIRRLVLEGDPDRW 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E +I P+L  GKI++CDRF DS+  YQG R       +D L  
Sbjct: 62  SAETEILLFTAARRDHLERLIDPSLAAGKIVICDRFADSTRMYQGLRGPGLRKVVDDLHR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T I+D+    G  R + R    E      FE     +  + R+ FL +A+
Sbjct: 122 LMIGR-EPDLTFIIDMDPTTGHARAKGRNGTEE-----RFEDFGADLQVQMREGFLALAK 175

Query: 183 NQPDRCHIVDS 193
            +P RC ++D 
Sbjct: 176 AEPGRCVVIDG 186


>gi|303257416|ref|ZP_07343429.1| dTMP kinase [Burkholderiales bacterium 1_1_47]
 gi|302859773|gb|EFL82851.1| dTMP kinase [Burkholderiales bacterium 1_1_47]
          Length = 202

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 11/205 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+T   ++   L+ +  D   TREPGG  +AE  R +LL+   +   
Sbjct: 5   GKFITVEGVDGAGKSTQFEVIANALKERGIDFVRTREPGGPQSAEKIRELLLN---EPMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+ E +V  AAR +++  +IRPAL  GK +LCDRF D+S AYQG         ++ L   
Sbjct: 62  AKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLANF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T+I DLP ++   R+  +        LD FE++D   H + RQ +L+IA+ 
Sbjct: 122 VHPDIKPDKTVIFDLPTEVAAARLSRK--------LDRFEQEDADFHRRVRQGYLEIAKR 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+RC ++D+  + + V+  +L  V
Sbjct: 174 EPERCVVIDAQGTPEEVSARVLKEV 198


>gi|296453337|ref|YP_003660480.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301]
 gi|296182768|gb|ADG99649.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301]
          Length = 233

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 128/220 (58%), Gaps = 15/220 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL  GVD  
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117
             +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +    +
Sbjct: 61  AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL   +   ++PD T +LD+   +   R+++     ESA   +  R         RQ F
Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPVLSHNRLEHAEDRMESAGSGFQSRT--------RQAF 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           LD+A  +P+R H++D++ S + V + I   +  L++  V+
Sbjct: 172 LDLAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211


>gi|171463583|ref|YP_001797696.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171193121|gb|ACB44082.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 211

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 22/213 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           ++G FISFEGI+GAGK+THI   +  +Q +  N +V +TREPGGT   E  R++LL   +
Sbjct: 4   HTGYFISFEGIDGAGKSTHIDAFRNLIQERYPNIEVVMTREPGGTVLGEQLRNLLLDTPM 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    E EA++  AAR +H+  VI+PAL  GKI++ DRF D+S+AYQG     + L L  
Sbjct: 64  N---LETEALLMFAARREHLSQVIKPALTAGKIIISDRFTDASFAYQG---GGRGLSLAK 117

Query: 120 LQEIS--VQE------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           L ++   VQ       + P+ TI+ DLP DI   R    ++       D FE+ D+   E
Sbjct: 118 LNDLERWVQGQPDGSILQPNLTILFDLPGDIAEARRSKVHT------PDKFEKMDLSFFE 171

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           + RQ +L  A++ PDR H+VD+  + +++   +
Sbjct: 172 RVRQEYLRRAKDDPDRFHLVDATQTPEAIWNGL 204


>gi|331005272|ref|ZP_08328664.1| Thymidylate kinase [gamma proteobacterium IMCC1989]
 gi|330420949|gb|EGG95223.1| Thymidylate kinase [gamma proteobacterium IMCC1989]
          Length = 211

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 6/201 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F++ EG EG GK+T+I+ ++ +L  +  +V  TREPGGTP AE  R +LL    ++  
Sbjct: 8   GKFLTIEGTEGVGKSTNIAYIQSYLTSQGIEVLTTREPGGTPLAEDIRELLLQNRDEKMD 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR  H++ VI PAL  G+ +LCDRF D++YAYQG         ++ L++ 
Sbjct: 68  ETAELLLVFAARAQHLQTVILPALERGQWVLCDRFTDATYAYQGGGRGLDLALIEMLEQR 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T++LD+ V IGL+R   R        LD FE + V   EK R  +L  A  
Sbjct: 128 IQGDIRPDLTLLLDIDVTIGLERAGRR------GELDRFEHEHVAFFEKVRHAYLARAAT 181

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
            P+R  +VD++ S + V   +
Sbjct: 182 FPERYGVVDASQSLEQVQLQV 202


>gi|120602139|ref|YP_966539.1| dTMP kinase [Desulfovibrio vulgaris DP4]
 gi|166221739|sp|A1VCE6|KTHY_DESVV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120562368|gb|ABM28112.1| thymidylate kinase [Desulfovibrio vulgaris DP4]
          Length = 224

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 3/206 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T +  L  +LQ+  + V VTREPGG+      R +LL  G  +   
Sbjct: 1   MFITFEGIEGSGKSTALQGLAAWLQQHGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  V+RPAL EG ++L DR+ DS+  YQG       + L    +++
Sbjct: 61  EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHEKRRQIFLDIAR 182
           V  + PD TI+LDL  + GL R   R ++RE   A    FE + +  H + R+ +L  A 
Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALAR-NIREGMHAAEGRFEAESLAFHTRVREGYLTWAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
               R  +VD+  S + V  +++ IV
Sbjct: 180 LHGGRYRVVDATQSPEDVVRDVVGIV 205


>gi|312109177|ref|YP_003987493.1| thymidylate kinase [Geobacillus sp. Y4.1MC1]
 gi|311214278|gb|ADP72882.1| thymidylate kinase [Geobacillus sp. Y4.1MC1]
          Length = 210

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 123/215 (57%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F SFEG EGAGKTT I++L+ FL+ K +DV  TREPGG   AE  R ++L+    E  
Sbjct: 3   GRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEMD 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AAAR  H+   I PA+  GKI+LCDRF+DSS AYQG    ++ L +D + +I
Sbjct: 63  GRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQG---FARELGMDEILQI 119

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++    P  TI  D+   +GL+R+Q     RE   LD    +++  H K R+ +L +
Sbjct: 120 NQFAIDGYFPTLTIYFDIDPKMGLERIQKNKQ-REMNRLDM---ENLSFHYKVREGYLKL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A+   DR   +D++ S   V    +  + + + +R
Sbjct: 176 AKRFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210


>gi|16801901|ref|NP_472169.1| thymidylate kinase [Listeria innocua Clip11262]
 gi|23821794|sp|Q927E8|KTHY_LISIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|16415376|emb|CAC98067.1| lin2841 [Listeria innocua Clip11262]
          Length = 208

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + ++    D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  I + 
Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQNGYEKIIQM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            PDR   VD+  + + + T IL
Sbjct: 179 FPDRFMRVDATKTPEEITTIIL 200


>gi|291517602|emb|CBK71218.1| thymidylate kinase [Bifidobacterium longum subsp. longum F8]
          Length = 206

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 15/215 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL  GVD  
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117
             +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +    +
Sbjct: 61  AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL   +   ++PD T +LD+   +   R+++     ESA  D+  R         RQ F
Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQAF 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD+A  +P+R  ++D++ S ++V   I + + EL 
Sbjct: 172 LDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206


>gi|77460373|ref|YP_349880.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1]
 gi|123603687|sp|Q3K8L5|KTHY_PSEPF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77384376|gb|ABA75889.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1]
          Length = 210

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 116/212 (54%), Gaps = 8/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +GLFI+ EG EGAGK+T+   L   L+    +V +TREPGGTP AE  R VLL+  VDE 
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVVLTREPGGTPLAERIREVLLAP-VDEV 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              + E ++  AAR  H+  VIRPAL  G ++LCDRF DS+YAYQG         + +L+
Sbjct: 61  MNPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSLERIAALE 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                ++ PD T+I DLPV+IGL R   R        LD FE +     E  R  FL  A
Sbjct: 121 TFVQGDLRPDLTLIFDLPVEIGLARASAR------GRLDRFELEGREFFEAVRNAFLKRA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            + P R   +D+      V  ++  ++  L++
Sbjct: 175 EDDPARYVRIDAGQPLVKVQQSLDTLIPNLLE 206


>gi|114320572|ref|YP_742255.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311744|sp|Q0A8S2|KTHY_ALHEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|114226966|gb|ABI56765.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 217

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 5/204 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG+EGAGK+T ++ ++ +LQR+  D  +TREPGGTP  E  R +LL     
Sbjct: 1   MTRGRFITLEGLEGAGKSTALTRVREYLQRQGIDAVMTREPGGTPLGERIRALLLGQSEP 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++  AAR +H++  I PAL  G+ ++CDRF D+SYAYQG         + +L
Sbjct: 61  PMAPATEALLMFAARSEHLDKRIWPALERGQWVVCDRFTDASYAYQGWGRGLGAERIAAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ +   + PD T+ LD+PV+ GL R   R         D FE++     E+  + +  +
Sbjct: 121 EDWTQGALRPDLTLWLDVPVETGLARAAGR-----GEAPDRFEQERDGFFERVHEGYAAL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A   P+R   VD+    ++V T +
Sbjct: 176 AERFPERIRRVDAGQPLEAVLTAL 199


>gi|308176312|ref|YP_003915718.1| dTMP kinase [Arthrobacter arilaitensis Re117]
 gi|307743775|emb|CBT74747.1| dTMP kinase [Arthrobacter arilaitensis Re117]
          Length = 217

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 4/204 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI FEG +GAGKTT +++ +++L+ +   V  TREPGGT  +E  R ++L  G  E  
Sbjct: 11  GLFIVFEGGDGAGKTTQVAMAQQWLESRGATVRTTREPGGTQISEELRSLVLEHGHGEID 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA++++AAR  HV+ VIRP+L  G  ++CDRF+DSS AYQG         + S+ + 
Sbjct: 71  ARTEALIYSAARAAHVQQVIRPSLEAGTHIICDRFVDSSLAYQGMGRELGFAAVASINDF 130

Query: 124 SVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   + PD TIILD+  + G  +R+     + +S   D  E +    HE+ R  FL++A 
Sbjct: 131 ATGGLKPDVTIILDISAEHGRARRIAASGGVEDS---DRLEAEPDDFHERIRNAFLELAA 187

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
             P R  ++D+  S + +  +I+ 
Sbjct: 188 QDPQRYLVLDATASVEQLHQSIVE 211


>gi|114330554|ref|YP_746776.1| dTMP kinase [Nitrosomonas eutropha C91]
 gi|122314450|sp|Q0AIL5|KTHY_NITEC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|114307568|gb|ABI58811.1| thymidylate kinase [Nitrosomonas eutropha C91]
          Length = 215

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 117/208 (56%), Gaps = 7/208 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGI+GAGK+TH++ L  FL+ K  +V VTREPG T   E  R +LL     
Sbjct: 1   MQRGKFITFEGIDGAGKSTHLAWLASFLRDKGLEVIVTREPGSTALGEQLRQLLLDH-RQ 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AE E ++  AAR +H++ VI PAL  G  ++ DRF D+S+AYQG         L+ L
Sbjct: 60  AMHAETETLLMFAARREHLDKVILPALERGAWVISDRFTDASFAYQGGGRGVPSARLEIL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++   +   PD T+  D+PV I  +RVQ+      +   D FE +  +  E+ RQ +L  
Sbjct: 120 EQWVQKGFSPDLTVYFDVPVTISRQRVQS------ARTADRFELEPDLFFERVRQAYLQR 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A+   +R  +VD + S + V T ++ +V
Sbjct: 174 AKQFSERIRVVDGSLSLEEVRTAMVEVV 201


>gi|206891148|ref|YP_002248232.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206743086|gb|ACI22143.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 209

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 7/204 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+FEGIEG+GKTT   LL   L+++   V  T EPG T A    R +LL+  + 
Sbjct: 1   MNKGIFITFEGIEGSGKTTQGKLLAEKLKKEGLKVLYTYEPGDTEAGRHIRKILLNSEI- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++ A R+ H+E  I+P +  G I++CDRF DS+  YQG         +  L
Sbjct: 60  KINPLCELLLYFADRVQHIEEKIKPCIESGFIVICDRFTDSTLVYQGYARGISIDLIKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I + E MPD T++LD P +IGLKR Q           D FE +++  HEK RQ +L +
Sbjct: 120 NKIVLDEFMPDLTVLLDCPANIGLKRNQKINK------KDRFEMENLAFHEKVRQGYLKL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A     R  ++D+  S   +A +I
Sbjct: 174 AELYKKRFFVLDATESIDKIAEDI 197


>gi|225166283|ref|ZP_03727978.1| dTMP kinase [Opitutaceae bacterium TAV2]
 gi|224799474|gb|EEG18008.1| dTMP kinase [Opitutaceae bacterium TAV2]
          Length = 234

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 128/216 (59%), Gaps = 11/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDE 61
           +G  IS EG EG GK+T I+ L + +Q    DV  TREPGGT   E  R++++ +   DE
Sbjct: 9   TGKLISLEGPEGCGKSTQIARLAKHIQLLGRDVFCTREPGGTEIGEQVRNIIVHNSKGDE 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119
             AE E ++FAA+R   V  VI P L+ G+I+L DRFLDSS  YQG    +++L +D   
Sbjct: 69  MCAETELLLFAASRAQLVREVIAPRLLRGEIVLSDRFLDSSTVYQG---VARNLAMDPVN 125

Query: 120 -LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + +V  VMPD TIILD+P ++ L R+ NR   R S   D  ER+++  + K R+ +L
Sbjct: 126 LINQFAVGNVMPDLTIILDVPPEVSLARI-NR---RASDLPDRMERENIDFYHKVREGYL 181

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A++ P    ++D   +   VA +I + V +L+ K
Sbjct: 182 FLAKSLPRAFLVLDGTQTEDEVAKHIWDEVLKLITK 217


>gi|78357381|ref|YP_388830.1| thymidylate kinase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552103|sp|Q30YW1|KTHY_DESDG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78219786|gb|ABB39135.1| thymidylate kinase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 212

 Score =  139 bits (349), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 7/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T ++ LK +LQ   +   +TREPGG+      R +LL  G D+   
Sbjct: 1   MFITFEGIEGSGKSTALARLKDWLQEHGHGATLTREPGGSRLGGILRSILLDIGNDDLTG 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  ++ A R  HV  VIRPAL EG  ++ DR+ DS+  YQG         L  L +++
Sbjct: 61  ETELFLYLADRSQHVHQVIRPALAEGVAVISDRYADSTVVYQGYGRGLDPALLHRLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE--SACLDYFERKDVMIHEKRRQIFLDIAR 182
           V+ + PD T++ DL  +IGLKR   R +LRE   A    FE + +  H + R+ +L  A 
Sbjct: 121 VRGLWPDLTLLFDLEPEIGLKRATTR-NLREGTGATEGRFEAESLAFHTRVREGYLTWAA 179

Query: 183 NQPDRCHIVDSAHS----FQSVATNILNI 207
              +R  I+D+A S    F+ V + + ++
Sbjct: 180 LNKERFRIIDAAASPDEVFEQVRSAVADV 208


>gi|197119572|ref|YP_002139999.1| thymidylate kinase [Geobacter bemidjiensis Bem]
 gi|229621737|sp|B5E9M9|KTHY_GEOBB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|197088932|gb|ACH40203.1| thymidylate kinase [Geobacter bemidjiensis Bem]
          Length = 225

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 122/217 (56%), Gaps = 4/217 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT + LLK  L+     V VTREPGG P A+  R +LL        
Sbjct: 2   GFFITFEGIEGCGKTTQLRLLKERLEAAGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV+ VI PAL  G+ +LCDRF D++ AYQG         ++ L  +
Sbjct: 62  PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLTVIEELNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V P  T+++D PV++GL R   R      A  + FER+ ++ H+K R  +L +A  
Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRNGYLTLAAA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
            P+R  +VD +   +   T +L  V E +++R+  L 
Sbjct: 182 FPERFVVVDGSGDVRQ--TGLL--VAEALRQRMQSLG 214


>gi|219849803|ref|YP_002464236.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
 gi|219544062|gb|ACL25800.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
          Length = 225

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 5/226 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+FEG EGAGK+T    L   LQ   Y V +TREPGGT   E  R +L+     
Sbjct: 1   MHRGLFITFEGPEGAGKSTQARRLYERLQAAGYPVILTREPGGTRIGELIRRILIDLRHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++F+AAR   V  +IRP L  G I++CDR+ DS++AYQG         L  +
Sbjct: 61  EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRVI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEKRRQI 176
            E++   + PD T  L + V+IGL+R Q+     E     A  +  + +D+  H +    
Sbjct: 121 TEVATGGLKPDLTFYLQIDVEIGLQRKQHARERSERGGQPAEWNRLDARDLAYHRRVMHG 180

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           F+++ + +P+R H +D+      +A  I + V  L+  R++PL+++
Sbjct: 181 FVELMKQEPERWHALDADQPVDELAEQIWHAVMPLL-DRITPLATR 225


>gi|126668139|ref|ZP_01739101.1| thymidylate kinase [Marinobacter sp. ELB17]
 gi|126627409|gb|EAZ98044.1| thymidylate kinase [Marinobacter sp. ELB17]
          Length = 209

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG GK+T ++     L+    +V VTREPGGTP AEA R +LL+   +   
Sbjct: 5   GRFITFEGTEGMGKSTQLATAAASLRAVGINVLVTREPGGTPMAEAIRELLLAPRDEPVH 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR  H+   I PAL  G+ +LCDRF D+++AYQG    +    +  L+ +
Sbjct: 65  ELTELLLMFAARAQHLHTRILPALTAGQWVLCDRFTDATFAYQGGGRGTPAERIGLLETL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              E+ PD  ++LD PV+ G+ R + R        LD FE++ V    + R  +L  AR+
Sbjct: 125 VQGELRPDHIVLLDAPVETGMARARKRGE------LDRFEQETVEFFARIRATYLQRARH 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P R HIVD+      V+ ++  +  E+V
Sbjct: 179 DPQRYHIVDAGQPLARVSADVKRLFQEIV 207


>gi|323342269|ref|ZP_08082501.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463381|gb|EFY08575.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 207

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 123/207 (59%), Gaps = 12/207 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF+SFEG +G+GKTT   ++  + ++KN  V  TREPGG   +E  R ++L    +E   
Sbjct: 3   LFVSFEGPDGSGKTTITKIVSEYFEKKNQPVLCTREPGGIRISEKIRELILDPEHEEMDD 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
             EA+++AA+R  H+   I+PAL  G++++CDRF+DSS AYQG    ++ + +D + +I 
Sbjct: 63  RTEALLYAASRRQHLIEKIKPALGRGELVICDRFVDSSLAYQG---YARGIGIDDVWDIN 119

Query: 124 --SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++   +PD TI LDL  + GLKR+  R         D  E +  + HEK  Q + ++ 
Sbjct: 120 MFAIDGFLPDLTIFLDLKPEEGLKRIGVR------GYKDRLELEGDVFHEKVYQGYQEVI 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           R  P+R  IVD+A S + VA +++ I+
Sbjct: 174 RRFPNRIKIVDAAQSIEDVAADVIKII 200


>gi|158319119|ref|YP_001511626.1| dTMP kinase [Alkaliphilus oremlandii OhILAs]
 gi|158139318|gb|ABW17630.1| dTMP kinase [Alkaliphilus oremlandii OhILAs]
          Length = 210

 Score =  138 bits (348), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG +G+GK+T I  +KRFL+ K Y V +TREPGGT   E  R ++L     
Sbjct: 1   MHKGLFITIEGPDGSGKSTQIHFIKRFLEEKGYKVVLTREPGGTVIGEKIRELVLDKNHK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HV   I PA+ EG I+LCDRF+DSS  YQG+        +  +
Sbjct: 61  EMANVTEALLYAASRAQHVAQRIIPAIEEGSIVLCDRFVDSSIVYQGKGRGLGVENIRDI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD TI+LD+  +IG++R +   S +E+   D  E++ +  H      + ++
Sbjct: 121 NDFATMGLKPDLTILLDIDPEIGIERAK---SAKEA---DRLEQEKIDFHRIVYDGYKEL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  P+R  +VD+  S + V+  I  I+ +++
Sbjct: 175 VQMYPERIKVVDANQSIEEVSKGIEYILNKIL 206


>gi|254483666|ref|ZP_05096886.1| thymidylate kinase [marine gamma proteobacterium HTCC2148]
 gi|214036077|gb|EEB76764.1| thymidylate kinase [marine gamma proteobacterium HTCC2148]
          Length = 215

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 6/210 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+ EG EG GK+T+++ +++ L     D+ VTREPGGT   E  R +LL    + 
Sbjct: 3   SRGLFITVEGGEGVGKSTNMAYMQQHLTDLGIDLLVTREPGGTALGEDIRELLLRPRQES 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             + AE ++  AAR  H+E V+ PAL  G+ +LCDRF D++YAYQG         +  L+
Sbjct: 63  MASGAELLLIFAARAQHLEQVVEPALANGRWVLCDRFTDATYAYQGGGRGLAVTMIRELE 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++   E+ PD T++LD PV +G+ R       RE   LD FE +     E+ R  +L +A
Sbjct: 123 QLVQGELRPDYTLLLDAPVAVGMSRA------RERGELDRFELEQTAFFERVRASYLQLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                R  +VD++     V   +  I  EL
Sbjct: 177 SESSGRYRVVDASKELVEVEQQLQEICSEL 206


>gi|294056288|ref|YP_003549946.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221]
 gi|293615621|gb|ADE55776.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221]
          Length = 209

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/218 (38%), Positives = 124/218 (56%), Gaps = 15/218 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEG EG GK+T I  L   L+ +  DV  TREPGGTP +EA R++L     DE G
Sbjct: 3   GLFISFEGSEGCGKSTQIRALASRLEAEGIDVVRTREPGGTPLSEAIRNLLQH---DEAG 59

Query: 64  ----AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               AEAE ++FAAAR      VI PA   GK +L DRF+DS+  YQG   +  H  + +
Sbjct: 60  EGMCAEAELLLFAAARAQLTREVIAPARRAGKAVLSDRFMDSTTVYQGVARALAHDDVAA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +V    PD TI++DL  ++GL+RV+     R    LD  ER+ +   +  RQ +L 
Sbjct: 120 INQFAVGTHKPDLTILIDLDPEVGLQRVKA----RSGGQLDRMEREALDFFQAVRQGYLA 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A  +  R  ++D  H+ +++   I    W  V++R++
Sbjct: 176 LAEQESKRFLVLDGNHTIEALEQEI----WNAVRQRLT 209


>gi|160871899|ref|ZP_02062031.1| thymidylate kinase [Rickettsiella grylli]
 gi|159120698|gb|EDP46036.1| thymidylate kinase [Rickettsiella grylli]
          Length = 218

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 12/207 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEFG 63
           FI+ EGIEG GK+T +  +  +LQ+ +  + +TREPGGTP AEA R +LL      +   
Sbjct: 8   FITLEGIEGVGKSTQLKFVADYLQQAHIPLTITREPGGTPIAEAIRSLLLQSDFSPEMLI 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++F AAR  H+  VI+PAL  G  +LCDRF ++SYAYQG        F+ SL   
Sbjct: 68  PETELLLFFAARAQHIHYVIKPALQRGDWVLCDRFTETSYAYQGGGRGIDVAFIRSLHLW 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
             Q++  +  ++LD PVDI L+R+++R +    E+   D+F R         R  +L+ A
Sbjct: 128 VQQDLNVNVVLLLDAPVDIALRRMRHRKTADRIEAEKHDFFTRA--------RASYLERA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +PD   ++D++ S + V   I N++
Sbjct: 180 QQRPDVYQVIDASRSLKDVQKQIKNVL 206


>gi|53803739|ref|YP_114428.1| thymidylate kinase [Methylococcus capsulatus str. Bath]
 gi|59798160|sp|Q606M0|KTHY_METCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53757500|gb|AAU91791.1| thymidylate kinase [Methylococcus capsulatus str. Bath]
          Length = 208

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T++  +   L+ +   V  TREPGGT   EA R + L    D
Sbjct: 1   MTPGKFITLEGGEGVGKSTNVDFVVSRLRARGLKVVATREPGGTAFGEAVREIFLRQ--D 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EAE ++  AAR+ H+  VI PAL  G  ++CDRF D+SYAYQG         +D L
Sbjct: 59  TVRPEAELLLLFAARVHHLREVIEPALRRGDWVVCDRFTDASYAYQGAGRGIAPGVIDFL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++LD PVD GLKR   R      +  D  ER+D     + R+ +L +
Sbjct: 119 RDWIQAGLRPDLTLLLDAPVDTGLKRAHQR------SGPDRLEREDSAFFARVREGYLAL 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           AR +P R  ++D+      V T I   V  L+   V
Sbjct: 173 ARAEPGRIRVIDADRPLALVQTAIATQVDSLLAGHV 208


>gi|260575561|ref|ZP_05843559.1| thymidylate kinase [Rhodobacter sp. SW2]
 gi|259022204|gb|EEW25502.1| thymidylate kinase [Rhodobacter sp. SW2]
          Length = 209

 Score =  138 bits (347), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 6/206 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEGI+G+GK+T   LL   L++  + V  TREPGG+P AE  R ++L    D
Sbjct: 1   MALGRFISFEGIDGSGKSTQSRLLAESLRKLGHSVCQTREPGGSPGAEEIRRLVLEGDPD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  IRPAL  G++++ DRF DS+  YQG         ++ L
Sbjct: 61  RWSAETEILLFTAARRDHLEKTIRPALARGEVVITDRFADSTRMYQGISRGDLGPLVNRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++ +  V PD T+++DL   +GL R   R    +      FE   + +  K R  FL +
Sbjct: 121 HDLMIG-VEPDLTLLIDLDPALGLNRAVARAGAEQ-----RFEDMGLALQIKMRAGFLAL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
           A   P+R  ++D     ++VA ++L 
Sbjct: 175 AAAHPERFRVIDGNRPPEAVAADVLG 200


>gi|194018013|ref|ZP_03056620.1| thymidylate kinase [Bacillus pumilus ATCC 7061]
 gi|194010350|gb|EDW19925.1| thymidylate kinase [Bacillus pumilus ATCC 7061]
          Length = 212

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+FEG EGAGKTT I  +   ++R+ Y V  TREPGG   AE  R V+L+    + 
Sbjct: 2   SGMFITFEGPEGAGKTTVIRKVYEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
            A+ EA+++AAAR  H+   + PAL  G+ +LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQG---YARGLGIDQVRS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++   MP  TI   +  + GLKR+      RE   LD    + +  H+  R+ +  
Sbjct: 119 INDFAIDGTMPQMTIYFSITPEEGLKRIHANQG-REKNRLDM---ETLNFHQLVREGYEL 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    P+R H+VD++   Q V   +L ++ + ++K
Sbjct: 175 LIAQSPERFHVVDASQPMQDVYEEVLRVIQDTLKK 209


>gi|163738563|ref|ZP_02145977.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107]
 gi|161387891|gb|EDQ12246.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107]
          Length = 229

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEGI+G+GK+T   LL   LQ +  +V +TREPGG+  AE  R ++L    D + 
Sbjct: 18  GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  +
Sbjct: 78  AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD TI++D+    GL R + R    E      FE   + + ++ R  FL +A  
Sbjct: 138 MIGH-EPDLTILIDMNPSKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             DR  ++D     + VA ++L +V
Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVV 216


>gi|87122703|ref|ZP_01078578.1| Thymidylate kinase [Marinomonas sp. MED121]
 gi|86162000|gb|EAQ63290.1| Thymidylate kinase [Marinomonas sp. MED121]
          Length = 208

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 7/200 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG+GK+T I  +K +L+ +N +  +TREPGGTP AE  R+++LS   +
Sbjct: 1   MIKGKFITLEGGEGSGKSTCIKYIKAWLESQNIEYIITREPGGTPLAEEIRNMILSHREE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E E ++  AAR  H++  I+PA+  GK ++ DRF+DSSY YQG         +D L
Sbjct: 61  KIHDETELLLMFAARTQHIKEKIKPAIDAGKWVISDRFVDSSYVYQGAARGGDLKKIDQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E  +Q   PD T++ D+PVDIGL RV+ R      A  D  + + V+ H+  R  FL  
Sbjct: 121 AEWVLQGCKPDKTLLFDVPVDIGLSRVEKR------AQSDRLDDEPVVFHQMVRDAFLAR 174

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
            +     C ++D++   ++V
Sbjct: 175 EKTSNHYC-LIDASQPIENV 193


>gi|83943051|ref|ZP_00955511.1| thymidylate kinase [Sulfitobacter sp. EE-36]
 gi|83846059|gb|EAP83936.1| thymidylate kinase [Sulfitobacter sp. EE-36]
          Length = 212

 Score =  137 bits (346), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 113/205 (55%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEGI+G+GK+T   LLK  L+   + V +TREPGG+  AE  R ++L    D + 
Sbjct: 7   GLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSAGAEEIRALVLQGDPDRWS 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E ++F AAR DH+E  I PAL  GKI++CDRF DS+  YQG         +D L  +
Sbjct: 67  ARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHSL 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  V PD T+++D+    GL R  +R ++ E      FE     +    R  FL +A  
Sbjct: 127 MIG-VEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAAE 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            PDR   ++ A S  +VA ++   V
Sbjct: 181 FPDRFVTINGAQSIDAVAADVFAQV 205


>gi|303241047|ref|ZP_07327557.1| thymidylate kinase [Acetivibrio cellulolyticus CD2]
 gi|302591472|gb|EFL61210.1| thymidylate kinase [Acetivibrio cellulolyticus CD2]
          Length = 206

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 118/205 (57%), Gaps = 8/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT I L++ +L+ K ++V VTREPGGT   E  R ++L     
Sbjct: 1   MKRGLFITTEGTDGSGKTTQIKLIESYLKGKGFEVVVTREPGGTSIGEKIRSIILDTENS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++A+AR   V  +I+P+L EGK+++CDRF+DSSY YQG   +     ++ +
Sbjct: 61  DMAYITEMMLYASARAQLVNELIKPSLSEGKVVICDRFIDSSYVYQGFGRNIDIELIERV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGL-KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             I++  +MPD T+  D+  ++ L +R+Q       S   D  ER+ +  H K    +  
Sbjct: 121 NRIALDGIMPDVTLFFDIDPEVALERRIQ-------STGADRIEREAMDFHRKVYNGYKK 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A   PDR   ++S  + + + +++
Sbjct: 174 LASMYPDRIKAIESNRNIEEIFSDV 198


>gi|317483375|ref|ZP_07942367.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690345|ref|YP_004219915.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|316915192|gb|EFV36622.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455201|dbj|BAJ65823.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 206

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 125/215 (58%), Gaps = 15/215 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           SGLF+SFEG++G GKTT +  L  +L+ +   V VTREPGGT   +A R +LL  GVD  
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLHAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117
             +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +    +
Sbjct: 61  AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL   +   ++PD T +LD+   +   R+++     ESA  D+  R         RQ F
Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQAF 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD+A  +P+R  ++D++ S ++V   I + + EL 
Sbjct: 172 LDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206


>gi|226356637|ref|YP_002786377.1| dTMP kinase (thymidylate kinase) [Deinococcus deserti VCD115]
 gi|226318627|gb|ACO46623.1| putative dTMP kinase (thymidylate kinase) [Deinococcus deserti
           VCD115]
          Length = 218

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 119/220 (54%), Gaps = 15/220 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDEFG 63
           FISFEG EGAGK+T I+ L   L+ ++    VTREPGGTP     R VLL     +D   
Sbjct: 12  FISFEGPEGAGKSTQIARLVARLEERSVPHTVTREPGGTPLGTRVREVLLDPDLSIDPL- 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++++A+R   V +VIRPAL +G  ++CDR+ DSS AYQG         L  L   
Sbjct: 71  --PEFLLYSASRAQLVTHVIRPALTQGHTVICDRYFDSSLAYQGAGRGLPVRLLRDLTRE 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + PD T++LDL   +GL+RV +R         D  ER D+  H++ RQ FLD+A  
Sbjct: 129 ATGGLTPDLTVLLDLDPALGLQRVASR------GQADRLERADLGFHQRVRQGFLDLAAA 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +P R  ++D+  S   +A  I    W  V++ +   SS  
Sbjct: 183 EPGRFLVLDATRSVDELAREI----WTAVERWLPCTSSSP 218


>gi|163743050|ref|ZP_02150433.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10]
 gi|161383733|gb|EDQ08119.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10]
          Length = 229

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEGI+G+GK+T   LL   LQ +  +V +TREPGG+  AE  R ++L    D + 
Sbjct: 18  GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  +
Sbjct: 78  AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD TI++D+    GL R + R    E      FE   + + ++ R  FL +A  
Sbjct: 138 MIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             DR  ++D     + VA ++L +V
Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVV 216


>gi|157690810|ref|YP_001485272.1| thymidylate kinase [Bacillus pumilus SAFR-032]
 gi|166987700|sp|A8F8Z5|KTHY_BACP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157679568|gb|ABV60712.1| dTMP kinase [Bacillus pumilus SAFR-032]
          Length = 212

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+FEG EGAGKTT I  +   ++R+ Y V  TREPGG   AE  R V+L+    + 
Sbjct: 2   SGMFITFEGPEGAGKTTVIRKVHEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
            A+ EA+++AAAR  H+   + PAL  G+ +LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQG---YARGLGIDQVRS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++   MP  TI   +  + GLKR+      RE   LD    + +  H+  R+ +  
Sbjct: 119 INDFAIDGTMPQMTIYFSITPEEGLKRIHANQG-REKNRLDM---ETLNFHQLVREGYEL 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    P+R H+VD++   Q V   +L ++ + ++K
Sbjct: 175 LIAQSPERFHVVDASKPMQDVYEEVLRVIQDTLKK 209


>gi|227545645|ref|ZP_03975694.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239622679|ref|ZP_04665710.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|312133481|ref|YP_004000820.1| tmk [Bifidobacterium longum subsp. longum BBMN68]
 gi|322688333|ref|YP_004208067.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F]
 gi|46576601|sp|Q8G6Z6|KTHY_BIFLO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|227213761|gb|EEI81600.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239514676|gb|EEQ54543.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|311772719|gb|ADQ02207.1| Tmk [Bifidobacterium longum subsp. longum BBMN68]
 gi|320459669|dbj|BAJ70289.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F]
          Length = 206

 Score =  137 bits (346), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 127/217 (58%), Gaps = 16/217 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL  GVD
Sbjct: 1   MN-GLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVD 58

Query: 61  ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHL 115
               +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +   
Sbjct: 59  GGAVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE- 117

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + SL   +   ++PD T +LD+   +   R+++     ESA  D+  R         RQ
Sbjct: 118 EIRSLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQ 169

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            FLD+A  +P+R  ++D++ S ++V   I + + EL 
Sbjct: 170 AFLDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206


>gi|149182688|ref|ZP_01861155.1| thymidylate kinase [Bacillus sp. SG-1]
 gi|148849598|gb|EDL63781.1| thymidylate kinase [Bacillus sp. SG-1]
          Length = 214

 Score =  137 bits (346), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG EGAGK+T I  +   L  K ++V +TREPGG   AE  R V+L     
Sbjct: 1   MKQGLFITVEGPEGAGKSTIIKKMADELTEKGHEVILTREPGGITIAEEIREVILDPKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H+   + P+L +G I+LCDRFLDSS AYQG         + S+
Sbjct: 61  AMDERTEALLYAAARRQHLAEKVIPSLDKGSIVLCDRFLDSSLAYQGHARGIGMEEVYSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++ + MPD T+  D+  +IGL+R+ + +  RE   LD    + +  HE+ R+ +L +
Sbjct: 121 NKFAIGDTMPDITLYFDVEPEIGLERI-SAHKGREVNRLDL---ETIDFHERVREGYLML 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               P+R   +D++ SF  V  N L I+ + + +R
Sbjct: 177 LEKFPERIKKIDASASFGEVYQNALKIIEKYIDER 211


>gi|116493219|ref|YP_804954.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745]
 gi|122265317|sp|Q03E60|KTHY_PEDPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116103369|gb|ABJ68512.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745]
          Length = 209

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 130/214 (60%), Gaps = 11/214 (5%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FISFEG +GAGKTT + ++++ + QR    + VTREPGG P +EA R ++L     E
Sbjct: 2   NGHFISFEGPDGAGKTTVLQAMVEHYQQRLKDQLTVTREPGGNPISEAIRTIILDKNNTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL +  ++ CDRF+DSS AYQG   + + +  D++ 
Sbjct: 62  MDERTEALLYAAARRQHLVETILPALKKNHVVFCDRFVDSSIAYQG---AGRKIGTDAVY 118

Query: 122 EISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++++   +  +P+ TI LD+P ++GLKR+        +  +D  + + +  H++ R  +L
Sbjct: 119 QMNLFATEGALPEKTIYLDVPSELGLKRIMT----HRTEDVDRLDLEQLDFHQRVRSAYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           D+A+  PDR  ++D++     V  +++ ++ +++
Sbjct: 175 DLAKKFPDRIVVIDASQELDDVKRDVIEVLDQIL 208


>gi|169825658|ref|YP_001695816.1| thymidylate kinase [Lysinibacillus sphaericus C3-41]
 gi|168990146|gb|ACA37686.1| Thymidylate kinase [Lysinibacillus sphaericus C3-41]
          Length = 215

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 124/216 (57%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNS LFI+FEG EGAGKTT I  +   L  KN DV  TREPGG   AE  R ++L+    
Sbjct: 7   MNSNLFITFEGPEGAGKTTVIQKIAERLAEKNIDVLATREPGGIEIAEKIRTIILNPAHT 66

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
                 EA+++AAAR  H    +RPAL  GK+++CDRF+DSS AYQG    ++ + +D  
Sbjct: 67  AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQG---YARGIGIDEV 123

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+ E ++ + +PD TI+ D+  ++GL R+    + RE   LD    + +  H+K  + +
Sbjct: 124 LSINEFAIGKKLPDMTILFDIAPEVGLARIYATGN-REVNRLDV---ESLPFHQKVHEGY 179

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           L +    P+R  +V++     SV   + +++ + +Q
Sbjct: 180 LLLVERYPERIRMVNADQDIDSVVEEVWSLLLKAIQ 215


>gi|311695098|gb|ADP97971.1| thymidylate kinase [marine bacterium HP15]
          Length = 213

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG GK+T ++     L     D  VTREPGGTP AEA R +LL+   +   
Sbjct: 5   GQFITFEGTEGVGKSTQLTNAADTLAGLGVDYIVTREPGGTPMAEAVRELLLAPRDEPVN 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR  H+   I PAL +G+ +LCDRF D+++AYQG         +  L+ +
Sbjct: 65  EITELLLMFAARAQHLHTRILPALEQGQWVLCDRFTDATFAYQGGGRGVPEERIALLETL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD  I+LD PVD G+ R + R        LD FE++D+   ++ R+ +L  A  
Sbjct: 125 VQGDIRPDHVIVLDAPVDTGMARARKR------GDLDRFEQEDLEFFQRIRETYLARAMA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           QP R H++D+A     V+  +  ++
Sbjct: 179 QPSRYHVIDAARPLAEVSGQVSELL 203


>gi|168187948|ref|ZP_02622583.1| thymidylate kinase [Clostridium botulinum C str. Eklund]
 gi|169294219|gb|EDS76352.1| thymidylate kinase [Clostridium botulinum C str. Eklund]
          Length = 212

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+ EG EG+GKTT + +++ +L+  N D   TREPGG   +E  R+V+L+    
Sbjct: 1   MNKGIFITLEGPEGSGKTTIVKMIEEYLRENNIDYISTREPGGINISEQIRNVILNKDNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++ A+R  H+   + PAL  GK+++CDRF+DSS AYQG    ++ + +D +
Sbjct: 61  EMDPRTEALLYVASRRQHLAERVIPALKSGKVVICDRFVDSSLAYQG---YARGIGIDEV 117

Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            EI   ++   MPD T+ LD+  +IGL R+ ++ S RE   LD  E+ D   H+K R+ +
Sbjct: 118 MEINEFAIDGYMPDLTLYLDIEPEIGLNRI-SKNSEREVNRLD-LEKLD--FHKKVREGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +    P+R   +++  S   V T + N +
Sbjct: 174 FKLLERYPNRIKQINANQSVDKVFTEVKNFL 204


>gi|254445325|ref|ZP_05058801.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235]
 gi|198259633|gb|EDY83941.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235]
          Length = 214

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 118/210 (56%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVD 60
           +G F +FEG EG+GK+T I LL   L    ++V VTREPGGT   E  RH+L+  S G D
Sbjct: 8   TGKFFTFEGSEGSGKSTQIELLAEELAGMGHEVVVTREPGGTSIGEEIRHLLIHSSAGKD 67

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EAE ++FAAAR   V  +I P L +G I+LCDRFLDS+  YQG   S     +  +
Sbjct: 68  -MTPEAELLLFAAARAQLVRELILPELEKGSIVLCDRFLDSTTVYQGAARSIASDPVSYI 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +V  + P  T ILD+P +  ++RV+ R     S   D  E+++   ++K R  +L +
Sbjct: 127 NQFAVGPLSPTLTFILDVPAEESIRRVKRRV----SDLPDRMEQENNDFYKKVRDGYLLL 182

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A++ P+R H+VD   S       IL  V +
Sbjct: 183 AKSMPERFHVVDGTRSLAVNREEILKTVLD 212


>gi|256397499|ref|YP_003119063.1| thymidylate kinase [Catenulispora acidiphila DSM 44928]
 gi|256363725|gb|ACU77222.1| thymidylate kinase [Catenulispora acidiphila DSM 44928]
          Length = 901

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 11/204 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61
           +G F+SFEG +G+GK+T + LL  +L+   ++V VTREPGGTP     R+++L     D 
Sbjct: 496 TGTFLSFEGGDGSGKSTQLDLLADWLRGSGHEVVVTREPGGTPLGTKLRNIVLDAHNADV 555

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R DHVE V+RPAL  G +++ DR++DSS AYQG   +     ++ L 
Sbjct: 556 ISPRAEALIYAADRADHVERVVRPALERGAVVITDRYVDSSLAYQGAGRALSAREVELLS 615

Query: 122 EISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + + Q +MPD TI++DL P++   +R             D  E + V  H + R  +L++
Sbjct: 616 QWATQGLMPDVTILMDLDPLEAARRR---------KTPADRLELESVDFHRRVRNRYLEL 666

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A  +P+R  ++++    + +A  I
Sbjct: 667 ATAEPERFIVINAMEPIEQIAGRI 690


>gi|326387758|ref|ZP_08209364.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207804|gb|EGD58615.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 207

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++G FI+ EG EG GK+T + LL + LQ   + V  TREPGGTP AEA R ++L+   +
Sbjct: 1   MSAGRFIALEGGEGVGKSTQLRLLAQALQADGHVVVTTREPGGTPGAEAIRAMVLANEGE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +G  AEA++FAAAR DHV+ +IRPAL  G+ +L DR+LDSS AYQG         + +L
Sbjct: 61  GWGPRAEALLFAAARADHVDRLIRPALERGEWVLTDRYLDSSRAYQGGGSGLSDDDILAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I  + ++PD TI+L L  +        R +LR+    D    +D   H +    F   
Sbjct: 121 HRIGSEGLLPDRTILLTLDPE----ETARRLTLRDEGRADRIGGRDAAYHARVAAAFRRF 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A  +P R  +VD++ + +SV   IL+ V
Sbjct: 177 AEAEPHRFTLVDASGTPESVHARILSAV 204


>gi|88810823|ref|ZP_01126080.1| thymidylate kinase [Nitrococcus mobilis Nb-231]
 gi|88792453|gb|EAR23563.1| thymidylate kinase [Nitrococcus mobilis Nb-231]
          Length = 222

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 6/211 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EGIEGAGKT+ +  L + L+ +  +  +TREPGGT   EA R +LL         +
Sbjct: 15  FITVEGIEGAGKTSCLDYLAKLLRNQAIEAVLTREPGGTSLGEAVRALLLDHRFRGMAGD 74

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR  H+  VIRPAL  G+ ++CDRF D++YAYQG   +     +  L+  + 
Sbjct: 75  AETLLVFAARAQHLAEVIRPALAAGQWVVCDRFTDATYAYQGGGRALGATRVGLLEHWAQ 134

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            E+ PD T+ LD+PV +GL R+ +R +      LD FE +     E+ R ++L+  R +P
Sbjct: 135 SELRPDRTLYLDVPVTVGLGRIASRGN------LDRFESERQAFFERVRCVYLERCRAEP 188

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            R   +++  S ++V T I   + +L+   V
Sbjct: 189 QRMRRIEADGSREAVHTQIAAALADLLNDGV 219


>gi|311112929|ref|YP_003984151.1| thymidylate kinase [Rothia dentocariosa ATCC 17931]
 gi|310944423|gb|ADP40717.1| thymidylate kinase [Rothia dentocariosa ATCC 17931]
          Length = 263

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 13/216 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI FEG +GAGKTT ++ L+  L+ + Y V  TREPGGTP  EA R ++L  G  E  
Sbjct: 34  GLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSEVD 93

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AEA++FAA+R  H    IRPAL  G ++L DR+LDSS AYQG     ++L  D++ ++
Sbjct: 94  ARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQG---IGRNLGKDTITDL 150

Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S    ++++P  TI+LD+P+    +R+ +R        +D  E +      +    F DI
Sbjct: 151 SRWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKARVHTAFADI 204

Query: 181 ARNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215
           AR   D  H +VD   S  +V   +L +V  L++ R
Sbjct: 205 ARQNADGAHYVVDGCGSVDAVHERVLEVVRPLLESR 240


>gi|81427954|ref|YP_394953.1| thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei
           23K]
 gi|123564716|sp|Q38YT6|KTHY_LACSS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78609595|emb|CAI54641.1| Thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei
           23K]
          Length = 214

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 13/212 (6%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKT+ + +++ R  +  + ++ VTREPGG P +E  R ++L       
Sbjct: 3   GKLITFEGPDGAGKTSALEAVVARLQKEVSQEIVVTREPGGNPISEQIRQIILDVKNTAM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I+PAL   K+++CDRF+DSS AYQG         +  +  
Sbjct: 63  DDRTEALLYAAARRQHIVEKIQPALAADKLVICDRFVDSSIAYQGAGRGIGEEAVAQMNL 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV----QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +   + PD T+ LD+P ++GL R+    QN+Y        D  +++ +  H+K RQ +L
Sbjct: 123 FATDGLTPDLTLYLDVPSEVGLARIKQHRQNQY--------DRLDQEKLAFHQKVRQSYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +A+  PDR   +D++   ++V T  L ++ +
Sbjct: 175 KLAQAHPDRIKTIDASQPLEAVVTQCLQVIAQ 206


>gi|220934998|ref|YP_002513897.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996308|gb|ACL72910.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 218

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 6/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GK+T I  L+ FL+ +   + VTREPGGTP AE  R +LLS       
Sbjct: 9   GRFITLEGAEGVGKSTQIQALQAFLESRGVPLLVTREPGGTPLAERIRELLLSRDHPPMH 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR +H+   I PAL  G  +LCDRF D++YAYQG         +  L++ 
Sbjct: 69  PDTELLLMFAARAEHLRTRILPALEAGTWVLCDRFTDATYAYQGGGRGLDPARIAVLEDW 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               V PD T++LD+ V  GL R + R         D FE++ +   E+ R+ +L  AR 
Sbjct: 129 VQGPVRPDLTLLLDVDVRTGLARARGR------GEADRFEQEAMDFFERVREAYLARARA 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +P R  I+D+  S ++V  ++   +  L+Q
Sbjct: 183 EPSRYRIIDAGQSLEAVTRDLQAALVSLLQ 212


>gi|149914153|ref|ZP_01902684.1| thymidylate kinase [Roseobacter sp. AzwK-3b]
 gi|149811672|gb|EDM71505.1| thymidylate kinase [Roseobacter sp. AzwK-3b]
          Length = 208

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 111/206 (53%), Gaps = 6/206 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G+GK+T   LL   L+    DV +TREPGG+P AE  R ++L    D +
Sbjct: 4   GGYFISFEGIDGSGKSTQARLLADHLRGTGRDVVLTREPGGSPGAEEIRALVLEGDGDRW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++F AAR DH+E  I PAL  G+I++CDRF DS+  YQG   +     +D L  
Sbjct: 64  SPETELLLFTAARRDHLERTIAPALEAGQIVICDRFADSTRLYQGLARADLRGLVDQLHS 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD TI++D+    GL R   R +  E      FE     + +K RQ FLD+A+
Sbjct: 124 LMIGR-EPDLTILIDMDPATGLGRALARGTGEER-----FESFGDSMQQKIRQGFLDLAQ 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
               R   VD      +VA +I  I 
Sbjct: 178 EFSARFVTVDGNRQLDAVAADIRQIA 203


>gi|302864959|ref|YP_003833596.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
 gi|302567818|gb|ADL44020.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
          Length = 718

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 12/216 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++SGLF+ FEG EGAGK+T ++ L   L+ +  DV VTREPG TP  E  R ++L     
Sbjct: 475 VSSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGERIRSLVLGTTPG 534

Query: 61  EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E  +  AEA+++AA R  HV  V+RPAL+ G +++ DR++DSS AYQG   + + L +D 
Sbjct: 535 EAPSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQG---AGRTLPVDE 591

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +S      + PD  ++LD+    GL RV++R     +   D  E + +  HE+ R  
Sbjct: 592 VSWLSSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----AEGTDRLEAESLTFHERVRYA 646

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           FLD+A   P R  ++D++      A  +   V EL+
Sbjct: 647 FLDLAAGDPKRYLVLDASRPIDETADAVARRVGELL 682


>gi|301060374|ref|ZP_07201237.1| dTMP kinase [delta proteobacterium NaphS2]
 gi|300445570|gb|EFK09472.1| dTMP kinase [delta proteobacterium NaphS2]
          Length = 212

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 104/192 (54%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T    +   L+R      +TREPGGTP     R +LLS G  +   
Sbjct: 1   MFITFEGIEGCGKSTQAKRIAARLERAGVSCILTREPGGTPVGNDIRQILLSSGNRDLPP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A R  H+ +V++PAL   K +LCDRF D++ AYQG            L E++
Sbjct: 61  LAELFLYEADRALHMASVVKPALAAKKWVLCDRFFDATTAYQGYARGQDLHMTARLNEMA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T +LD PV +GLKR   R +    A  D FE++    HE  R  + ++A+  
Sbjct: 121 SFGIKPDKTFLLDCPVSVGLKRALKRNAESRVAGQDRFEQEKTAFHEAVRHGYRELAKQN 180

Query: 185 PDRCHIVDSAHS 196
           P R  +VD+  +
Sbjct: 181 PHRFVVVDATQT 192


>gi|296329529|ref|ZP_06872015.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305672726|ref|YP_003864397.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296153272|gb|EFG94135.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305410969|gb|ADM36087.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 212

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 124/215 (57%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILIAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
               EA+++AAAR  H+   ++PAL +G ++LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DPRTEALLYAAARRQHLVEKVKPALEQGHVVLCDRFIDSSLAYQG---YARGLGIDEVLS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E ++ ++MP  T+   +  + GLKR+    S RE   LD    + +  H K R+ + +
Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIHANGS-REKNRLDL---EKLSFHTKVREGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P R H VD++ S   V  ++L +V E ++K
Sbjct: 175 LMKRFPKRFHPVDASQSKDLVVQDVLKVVNEALKK 209


>gi|260102441|ref|ZP_05752678.1| dTMP kinase [Lactobacillus helveticus DSM 20075]
 gi|260083761|gb|EEW67881.1| dTMP kinase [Lactobacillus helveticus DSM 20075]
          Length = 216

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 11/206 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F+SFEG +GAGK+T +  +L +   +      VTREPGG+  AE  R ++L    D+ 
Sbjct: 7   GYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  HVE +IRPAL EGKI+  DRF+DSS AYQGE    + L ++ +++
Sbjct: 67  DAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGE---GRDLGIEEVKQ 123

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +  ++ PD T  LD+  +IGL R+Q     +E    D  E++++  H+K    FL 
Sbjct: 124 INDFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLK 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
           +    PDR   +D+    + V   ++
Sbjct: 180 VKDLYPDRFVTIDATQPIEDVVNQVI 205


>gi|253699689|ref|YP_003020878.1| thymidylate kinase [Geobacter sp. M21]
 gi|259494271|sp|C6E2H4|KTHY_GEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|251774539|gb|ACT17120.1| thymidylate kinase [Geobacter sp. M21]
          Length = 225

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 121/217 (55%), Gaps = 4/217 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT + LLK  L      V VTREPGG P A+  R +LL        
Sbjct: 2   GFFITFEGIEGCGKTTQLRLLKERLVALGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV+ VI PAL  G+ +LCDRF D++ AYQG         ++ L  +
Sbjct: 62  PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLSVIEELNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V P  T+++D PV++GL R   R      A  + FER+ ++ H+K R  +L +A  
Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRDGYLALAAA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
            P+R  +VD +   Q   T +L  V E +++R+  L 
Sbjct: 182 FPERFVVVDGSGDVQQ--TGLL--VEEALRRRMQSLG 214


>gi|330465259|ref|YP_004403002.1| thymidylate kinase [Verrucosispora maris AB-18-032]
 gi|328808230|gb|AEB42402.1| thymidylate kinase [Verrucosispora maris AB-18-032]
          Length = 753

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 13/217 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +++GLF+ FEG EGAGK+T ++ L   L+ +  DV VTREPG T      R ++L    D
Sbjct: 512 VSAGLFVVFEGGEGAGKSTQLAQLAERLRAEGRDVVVTREPGATGVGTRIRSLVLDNNTD 571

Query: 61  EFGA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +      AEA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG   + + L +D
Sbjct: 572 DEAPSPRAEALLYAADRAHHVATVVRPALSRGAVVISDRYVDSSLAYQG---AGRTLPVD 628

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            L  +S      + PD  ++LD+    GL RV  R     S   D  E + +  HE+ R 
Sbjct: 629 ELSWLSSWATGGLKPDLVVLLDIDPRAGLSRVAER-----SRAADRLEAESLAFHERVRY 683

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            FLD+A   P R  ++D+ H  + +A  + + V EL+
Sbjct: 684 AFLDLAAADPKRYLVLDAGHPVEQIAERVADRVTELL 720


>gi|161506952|ref|YP_001576906.1| thymidylate kinase [Lactobacillus helveticus DPC 4571]
 gi|172048179|sp|A8YTF9|KTHY_LACH4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|160347941|gb|ABX26615.1| Thymidylate kinase [Lactobacillus helveticus DPC 4571]
 gi|328462877|gb|EGF34726.1| thymidylate kinase [Lactobacillus helveticus MTCC 5463]
          Length = 212

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 11/206 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F+SFEG +GAGK+T +  +L +   +      VTREPGG+  AE  R ++L    D+ 
Sbjct: 3   GYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  HVE +IRPAL EGKI+  DRF+DSS AYQGE    + L ++ +++
Sbjct: 63  DAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGE---GRDLGIEEVKQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +  ++ PD T  LD+  +IGL R+Q     +E    D  E++++  H+K    FL 
Sbjct: 120 INDFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLK 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
           +    PDR   +D+    + V   ++
Sbjct: 176 VKDLYPDRFVTIDATQPIEDVVNQVI 201


>gi|256848132|ref|ZP_05553576.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715192|gb|EEU30169.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN]
          Length = 212

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 125/219 (57%), Gaps = 16/219 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ IS ++ +L +K     V +TREPGG   +E  R +L       
Sbjct: 3   GRFISFEGPDGAGKTSVISAIQEWLTQKYGKQAVLLTREPGGNRISEQIRQILFDDHNTN 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAAAR  H+   I PAL  GK +L DR++DSS AYQG     +HL  D + 
Sbjct: 63  MDARTEALLFAAARRQHIVEDIEPALQAGKFVLSDRYVDSSVAYQG---GGRHLGADDIW 119

Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           E+   ++  ++PD TI LD+P ++GL+R+    S      ++  +R+ +  H+  R  +L
Sbjct: 120 ELNQFAIHGLLPDLTIYLDIPSELGLERI----SKHRQNQVNRLDREKLRFHQDVRNAYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +A+    R  ++D++    +V    +N+V E++Q R +
Sbjct: 176 TLAQRHQKRIQLIDASQPLPTV----INMVQEMIQNRFN 210


>gi|308066851|ref|YP_003868456.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681]
 gi|305856130|gb|ADM67918.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681]
          Length = 215

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 124/216 (57%), Gaps = 9/216 (4%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN  G+FI+ EG +G+GKTT I  L +F++ + Y V  TREPGG   +E  R ++L    
Sbjct: 1   MNRKGIFITLEGGDGSGKTTMIQRLAKFMEEEGYPVITTREPGGIEISEKIRSIILDPAH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AAAR  H+   ++PA+ +G I+LCDRF+DSS  YQG         + S
Sbjct: 61  TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +V +  PD T  LD+  ++GL R+    +    A +D  + + +  H K R+ +L+
Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARI----NASRGAEMDRLDMESISFHHKVREAYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +AR  P+R  IVD++ + + V      ++ +L++KR
Sbjct: 177 LARKFPERITIVDASPAPEQVE----QVLKDLLKKR 208


>gi|172056067|ref|YP_001812527.1| dTMP kinase [Exiguobacterium sibiricum 255-15]
 gi|229621736|sp|B1YGD3|KTHY_EXIS2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|171988588|gb|ACB59510.1| dTMP kinase [Exiguobacterium sibiricum 255-15]
          Length = 212

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGKTT + LL   L  + Y++ +TREPGGT      R ++L+    E 
Sbjct: 2   TGTFITVEGPDGAGKTTQLQLLADRLTAEGYEIVMTREPGGTRIGNEIRSLILNPDFQEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++AA+R  HV  +IRPAL  GKI+LCDRF+D+S AYQG         + S+ +
Sbjct: 62  DEMTEILLYAASRAQHVNELIRPALAAGKIVLCDRFIDASIAYQGYGLGYTIEQVRSINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T + DL V    +R+ +R        LD  E++D    ++    F+ +A 
Sbjct: 122 QATNHLTPDRTYLFDLTVSESKQRMMDR------GALDRIEQRDDAFRQRVYDGFMTLAV 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P+R  +VD+  S +S+ T +   V   ++KR
Sbjct: 176 QEPERIQLVDANQSIESLQTELCKDVLTYLKKR 208


>gi|15805151|ref|NP_293837.1| thymidylate kinase [Deinococcus radiodurans R1]
 gi|14285522|sp|Q9RY40|KTHY_DEIRA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|6457772|gb|AAF09698.1|AE001873_8 thymidylate kinase [Deinococcus radiodurans R1]
          Length = 206

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 120/218 (55%), Gaps = 17/218 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG EGAGKTT ++ L+  L+   + V VTREPGGTP     R V+L   V 
Sbjct: 1   MSQGLFITLEGPEGAGKTTQLARLEARLRAAGHAVTVTREPGGTPLGTRVREVVLDPAV- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++++A+R   V  V+RPAL  G+ +LCDR+ DSS AYQG   + + L L  L
Sbjct: 60  EIEPLGEFLLYSASRAQLVREVLRPALERGETVLCDRYADSSLAYQG---AGRGLSLPLL 116

Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++I+ +    + P  T++LDL   +GL+R   R         D  E+ D+  H + RQ F
Sbjct: 117 RQITAEVTGGLTPGLTVLLDLDPALGLQRAARR------GQPDRLEQADLTFHRRVRQGF 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           LD+A  +P R  ++D+      +   I    W  V +R
Sbjct: 171 LDLAHAEPQRFLVLDATRPEDELEAEI----WAAVSER 204


>gi|227894602|ref|ZP_04012407.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047]
 gi|227863593|gb|EEJ71014.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047]
          Length = 216

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F+SFEG +GAGK+T +  +L +   R      VTREPGG+  AE  R ++L    D+ 
Sbjct: 7   GYFVSFEGPDGAGKSTVLKEVLAKISPRLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AA+R  HVE VI+PAL  GKI+  DRF+DSS AYQGE        +  + +
Sbjct: 67  DAKTEALLYAASRSQHVEEVIKPALAAGKIVFSDRFVDSSLAYQGEGRGLGIKEVKQIND 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  ++ PD T  LD+  +IGLKR++     +E    D  E++++  H+K    FL +  
Sbjct: 127 FATDKLDPDLTFFLDVAPEIGLKRIEKLRPDQE----DRLEQENIAFHKKVYAGFLKVRD 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             PDR   +D+    + V   +++++
Sbjct: 183 MYPDRFVTIDATQPIEKVVDQVISVL 208


>gi|321313698|ref|YP_004205985.1| thymidylate kinase [Bacillus subtilis BSn5]
 gi|320019972|gb|ADV94958.1| thymidylate kinase [Bacillus subtilis BSn5]
          Length = 212

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 126/215 (58%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E ++ ++MP  T+   +  + GLKR+    S RE   LD  E+ D   H K ++ + +
Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 175 LMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209


>gi|254448227|ref|ZP_05061689.1| thymidylate kinase [gamma proteobacterium HTCC5015]
 gi|198262094|gb|EDY86377.1| thymidylate kinase [gamma proteobacterium HTCC5015]
          Length = 213

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GK+T++  ++++L  +  +V  TREPGGTP  EA R VLL    +  G
Sbjct: 3   GRFITLEGGEGVGKSTNLRYVQQWLTGQGLNVVQTREPGGTPLGEALRGVLLGDQAEGIG 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+AE +   AAR +H++ VI PAL  G  +LCDRF D+SYAYQG         + +L+  
Sbjct: 63  AKAELLTVFAARQEHLDKVIVPALERGDWVLCDRFTDASYAYQGGGRGLAFDTIAALENW 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T++LD P+++G+ R   R         D FER+     E   + +   A  
Sbjct: 123 VQGDLRPDLTLLLDAPLEVGMARAAER------GQADRFEREPRAFFEAVSEAYRRRAST 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
           + +R  ++D+A    SV   I  +    + +R++P
Sbjct: 177 EAERYAVIDAAQDLASVQAQIDRV----LSERLAP 207


>gi|320095385|ref|ZP_08027065.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977690|gb|EFW09353.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 256

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 15/210 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG++GAGKTT I  ++ + + + ++V +T EPGGTP     R  L+  G D+  
Sbjct: 13  GVFITFEGVDGAGKTTQIRNVREWFEERGFEVVMTCEPGGTPLGAELRR-LVQNGPDDID 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AA R  HV  V+RPAL  G ++L DR++DSS AYQG   +++ L +D +  +
Sbjct: 72  PRTEALLYAADRAYHVATVVRPALARGAVVLGDRYIDSSLAYQG---AARSLGVDEIAAM 128

Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S    + + P  T +LDLP ++G  R  +          D  ER+    HE+ R+ +L +
Sbjct: 129 SAWATEGLSPRTTFLLDLPPEVGAGRRTD--------APDRMERESADFHERVRREYLRL 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A  +PDR  ++D+  + + V + I  ++ E
Sbjct: 181 ADAEPDRIVVIDAVGTREEVFSEIRGVLVE 210


>gi|269836979|ref|YP_003319207.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745]
 gi|269786242|gb|ACZ38385.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745]
          Length = 212

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/219 (41%), Positives = 126/219 (57%), Gaps = 9/219 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG EGAGK+T I  L   L+ + Y V  TREPGGT   EA R +LL+        
Sbjct: 3   LFVTFEGPEGAGKSTQIRRLASELEARGYSVVATREPGGTAIGEAIRQILLAPEHSAMLP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E EA++  AAR  HV  VI+PAL  GKI+LCDRF+DS+  YQG         L +LQ  +
Sbjct: 63  ETEALLNTAARAQHVAEVIQPALAAGKIVLCDRFVDSTLVYQGAGRGLPTSDLLALQRFA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + PD T++LDLPV++G  R   R S      L  F+   +  HE+ R  FL +AR+ 
Sbjct: 123 TRGLWPDLTLLLDLPVEVGQAR--RRAS---GEPLSRFDADALGFHERVRTGFLALARDD 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           P R  I+D+A S ++VA  +L +V E    R+ P   ++
Sbjct: 178 PARWRIIDAAQSEEAVAREVLAVVLE----RLPPAPGRQ 212


>gi|291482399|dbj|BAI83474.1| thymidylate kinase [Bacillus subtilis subsp. natto BEST195]
          Length = 212

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 126/215 (58%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E ++ ++MP  T+   +  + GLKR+    S RE   LD  E+ D   H K ++ + +
Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 175 LMKRFPERFHSVDAGQSKGLVVQDVLKVIDEALKK 209


>gi|239618400|ref|YP_002941722.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1]
 gi|259494274|sp|C5CHP2|KTHY_KOSOT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|239507231|gb|ACR80718.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1]
          Length = 208

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 116/204 (56%), Gaps = 11/204 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEGI+G+GK+T ++L + +L+R + +    REPGGT A E  R +LL      F  
Sbjct: 1   MFISFEGIDGSGKSTQVALFREYLERNSMEYVFIREPGGTQAGEDIREILLHNEYKLF-P 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++F A+R   V  VI PAL + K++L DRFLDSS AYQG         + +L E S
Sbjct: 60  ETELLLFMASRAQIVREVIIPALKKKKLVLADRFLDSSVAYQGYGRGLSIQMVTTLNEFS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              V P  T+ +D+PVD+ +KR++   ++   E   LD+F+R         RQ +L++A+
Sbjct: 120 TGGVTPHLTLFIDVPVDVAVKRMRREMKHDKIEMESLDFFKRV--------RQGYLELAK 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
             P R  ++D   S + +   ++ 
Sbjct: 172 RDPKRILVIDGTMSVEKIHEQVVK 195


>gi|149376737|ref|ZP_01894495.1| thymidylate kinase [Marinobacter algicola DG893]
 gi|149358976|gb|EDM47442.1| thymidylate kinase [Marinobacter algicola DG893]
          Length = 210

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG GK+T ++     L     +  VTREPGGTP AE+ R +LL+   +   
Sbjct: 5   GQFITFEGTEGVGKSTQLANAASTLDALGVECVVTREPGGTPMAESIRELLLAPRDEPVN 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR  H+   I P L  G+ +LCDRF D+++AYQG         +  L+ +
Sbjct: 65  ETTELLLMFAARAQHLHTRILPELEAGRWVLCDRFTDATFAYQGGGRGVPTERIALLENL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               V PD  ++LD PV+ G+ R ++R        LD FE++ V   E+ R+ +L  A N
Sbjct: 125 VQGTVRPDHVVLLDAPVETGMTRARHRGE------LDRFEQEAVAFFERIRETYLARAAN 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P R HIVD++   ++V+  +  ++  LV +
Sbjct: 179 APGRYHIVDASQPIETVSAEVSGLLRNLVNR 209


>gi|283853941|ref|ZP_06371146.1| thymidylate kinase [Desulfovibrio sp. FW1012B]
 gi|283570672|gb|EFC18727.1| thymidylate kinase [Desulfovibrio sp. FW1012B]
          Length = 211

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 5/214 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEG+GK+T I LL   L+R    V VTREPGG    +  R +LLS       +
Sbjct: 1   MFITLEGIEGSGKSTQIGLLTTALERTGRTVRVTREPGGCGLGQTLRAILLSLETRNLDS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A R  HV  VIRPAL  G+++LCDRF DS+ AYQG   S     L  L +++
Sbjct: 61  RAELFLYLADRAQHVAEVIRPALAAGQVVLCDRFADSTIAYQGYGRSLDVALLQQLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           V    P  T++LD+  + GL+R   R      +A    FE + +  H + R  +  +A  
Sbjct: 121 VAGTWPQLTLLLDIDPEQGLRRALARNLQAGTTAAEGRFEAEHLDFHGRVRDGYRTLASL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            P R   VD+     +VA      VW++V +R+ 
Sbjct: 181 HPRRFVTVDATPDAATVAAR----VWDVVSQRLG 210


>gi|163814924|ref|ZP_02206312.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759]
 gi|158449863|gb|EDP26858.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759]
          Length = 207

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 125/217 (57%), Gaps = 16/217 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EG +GAGKTT   LLK +L++K YDV +TR+PGG P +EA R V+L+    E G
Sbjct: 3   GIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKEFTEMG 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120
              E +++A+AR   V+  I+PAL  G+ ++ DRF+DSS  YQG     + L +D+   +
Sbjct: 63  YMTELLLYASARAQLVKENIKPALEAGQAVIADRFVDSSAVYQG---IGRGLGVDTVYKI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++Q +MPD T ++DL    G+ R +N+      A LD  E + +  H+K    +  +
Sbjct: 120 NEFALQGIMPDMTFLMDLNAQEGIARKKNQ------AELDRMENEKIEFHQKVVDGYRML 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A   P+R   +D+          I  I+ + V+K+++
Sbjct: 174 ADMHPERIVKIDATLPINE----IHGIITKYVEKKLN 206


>gi|126726755|ref|ZP_01742595.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150]
 gi|126704084|gb|EBA03177.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150]
          Length = 209

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 10/204 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEGI+G+GK+T    L   L    +DV  TREPGG+  AE  R +L+    D + AE
Sbjct: 12  FITFEGIDGSGKSTQAKRLVAHLTSLGHDVIHTREPGGSAGAEEIRRLLVEGDPDRWSAE 71

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QEI 123
            E ++F AAR DH+E  I PAL  GK ++ DRF DS+  YQG         +D+L  Q I
Sbjct: 72  TEILLFTAARRDHLEKTIIPALAAGKWVVSDRFADSTRVYQGATRGDLRGIVDALHAQMI 131

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V+   PD T I+D+     L R      L   +  D FE   +   E+ RQ FLD+A++
Sbjct: 132 GVE---PDMTFIIDMDPVAALSR-----GLARKSGEDRFEDFGLDFQERLRQGFLDLAKD 183

Query: 184 QPDRCHIVDSAHSFQSVATNILNI 207
            PDRC ++D +    +V+ +I  +
Sbjct: 184 YPDRCRLIDGSRGIDAVSADITAV 207


>gi|331270648|ref|YP_004397140.1| thymidylate kinase [Clostridium botulinum BKT015925]
 gi|329127198|gb|AEB77143.1| thymidylate kinase [Clostridium botulinum BKT015925]
          Length = 210

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 10/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+ EG +G+GKTT + +++++L+  N D   TREPGG   +E  R ++L     
Sbjct: 1   MNKGVFITLEGPDGSGKTTIVKMIEKYLKENNVDYISTREPGGINISEQIREIILDTKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
           E  A  EA+++ A+R  H+   + PAL  GKI++CDRF+DSS AYQG    ++ + +D  
Sbjct: 61  EMDARTEALLYVASRRQHLAERVIPALKLGKIVICDRFIDSSLAYQG---YARGIGIDEV 117

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+ E ++   MP+ T+ LD+  +IGLKR+   +  RE   LD  E+ D   H+K R+ +
Sbjct: 118 MSINEFAIDGYMPNLTLYLDIEPEIGLKRISQNHK-REVNRLD-LEKLD--FHKKVREGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +    P+R   +++      V  ++ N +  +V
Sbjct: 174 FKVLEKYPNRIKKINANQPIDKVFEDVKNYLKFMV 208


>gi|261380492|ref|ZP_05985065.1| dTMP kinase [Neisseria subflava NJ9703]
 gi|284796744|gb|EFC52091.1| dTMP kinase [Neisseria subflava NJ9703]
          Length = 208

 Score =  135 bits (341), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 117/199 (58%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QVGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+    
Sbjct: 64  TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +  PD T++LD+P+++ + R+      RE    D FE+++     + R+++L  A  QP
Sbjct: 124 GDFRPDLTLLLDVPLEVSMARINQ---TREK---DRFEQEEAEFFNRVREVYLQRANEQP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++DS+ S  +V   I
Sbjct: 178 ERYAVIDSSQSLDAVKNQI 196


>gi|150015005|ref|YP_001307259.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052]
 gi|189028831|sp|A6LPM3|KTHY_CLOB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|149901470|gb|ABR32303.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052]
          Length = 213

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI FEG EG GKTT I  +  ++   N++   TREPGG   +E  R V+LS    
Sbjct: 1   MKKGLFIVFEGGEGTGKTTAIDAIYDWITENNFECIKTREPGGIKISEQIRQVILSKDNK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
           E  A+ EA+++AAAR  H+   + PAL +G I+LCDRF+DSS AYQG    +++L ++  
Sbjct: 61  EMDAKTEALLYAAARRQHLVEKVIPALNQGVIVLCDRFIDSSLAYQG---YARNLGIEEV 117

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+ + ++ E MPD +++ DL   IGL R+ N    RE   LD    + +  HE+ R+ +
Sbjct: 118 LSINKFAIGEYMPDISVLFDLDPKIGLARIANN-DCREVNRLDI---EKLEFHERVREGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + +N   R   +D+ ++ ++V   I NI+
Sbjct: 174 DIVYKNNNHRIVKIDANNTKENVINQIKNIL 204


>gi|255320788|ref|ZP_05361963.1| thymidylate kinase [Acinetobacter radioresistens SK82]
 gi|255302165|gb|EET81407.1| thymidylate kinase [Acinetobacter radioresistens SK82]
          Length = 202

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 114/209 (54%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  +    ++K  ++ +TREPGGTP AE  R +LLS   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTPLAEQIRALLLSVSHDEKMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GK +LCDRF D+S+AYQ          L  L + 
Sbjct: 61  DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLAVLNQS 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T+ LD PV++G+ R       RE   LD FE++ V   EK R  +  + + 
Sbjct: 121 FVSR-MPDITLWLDAPVELGMSRA------RERGALDRFEQEKVSFFEKVRAGYTRLWQQ 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+R   +D+  + + V    L  + +L 
Sbjct: 174 HPERIKRLDATQAPEKVLEQALEQIGKLA 202


>gi|239825610|ref|YP_002948234.1| thymidylate kinase [Geobacillus sp. WCH70]
 gi|259494272|sp|C5D352|KTHY_GEOSW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|239805903|gb|ACS22968.1| thymidylate kinase [Geobacillus sp. WCH70]
          Length = 210

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 10/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F SFEG +GAGKTT I+ L+ FL+ K +DV +TREPGG   AE  R ++L+    E  
Sbjct: 3   GRFFSFEGPDGAGKTTMITKLESFLREKGFDVLLTREPGGVRIAEEIRSIILNPKHTEMD 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AAAR  H+   I PA+  GKI+LCDRF+DSS AYQG    ++ L +D + +I
Sbjct: 63  GRTEALLYAAARRQHLLEKIIPAIKAGKIVLCDRFVDSSLAYQG---FARGLGIDEILQI 119

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++    P  TI  D+   IGL+R+Q     RE   LD    + +  H K R+ +L I
Sbjct: 120 NQFAIDGFFPSLTIYFDIDPKIGLERIQKNKQ-REINRLDM---ESLSFHYKVREGYLKI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A    DR  ++D++     V    +  V + ++ R
Sbjct: 176 AERFSDRIIVIDASKPVDEVFAMTIAAVMDQIEGR 210


>gi|326795549|ref|YP_004313369.1| Thymidylate kinase [Marinomonas mediterranea MMB-1]
 gi|326546313|gb|ADZ91533.1| Thymidylate kinase [Marinomonas mediterranea MMB-1]
          Length = 208

 Score =  135 bits (340), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG+GK+T I+ L+++++ +     +TREPGGTP AE  R V+LS   +   
Sbjct: 3   GKFITLEGGEGSGKSTAIACLEQWMKAQGIPYLLTREPGGTPLAEEIRQVVLSKRDETVN 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  E ++  AAR  HV   I PAL  G  ++ DRF+DSSY YQG         +DSL  +
Sbjct: 63  SITELLLVFAARAQHVAQKIAPALESGVWVISDRFIDSSYVYQGVARGLDIEDIDSLVRL 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V   +PD TI+LD+PV +G+ RV  R         D  + +    HE  R  FLD+A+ 
Sbjct: 123 AVGASLPDKTILLDVPVSVGMARVSARTG------NDRLDGESTQFHEMVRAGFLDLAKR 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              R  IVD++   ++V   I+ I+ ++ Q +
Sbjct: 177 DSHRISIVDASVPQENVFEQIVTILEQVKQAK 208


>gi|159039919|ref|YP_001539172.1| dTMP kinase [Salinispora arenicola CNS-205]
 gi|157918754|gb|ABW00182.1| dTMP kinase [Salinispora arenicola CNS-205]
          Length = 703

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 12/216 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           +++GLF+ FEG EGAGK+T ++LL   L+ +  DV VTREPG T   E  R +LL   G 
Sbjct: 445 VSAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGIGERIRSLLLGQPGS 504

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +     AEA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG   + + L +D 
Sbjct: 505 EVPSPRAEALLYAADRAHHVATVVRPALARGAVVVSDRYIDSSLAYQG---AGRTLPVDE 561

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +S      + PD  ++LD+    GL RV  R     S   D+ E + V  HE+ R  
Sbjct: 562 VSWLSSWATGGLKPDLVVLLDIDPHTGLSRVAVR-----SGATDHLEAESVSFHERVRYA 616

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           FLD+A   P    ++D+A     +A  +   + EL+
Sbjct: 617 FLDLAATDPKHYLVLDAARPADEIADEVARRITELL 652


>gi|331703062|ref|YP_004399749.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801617|emb|CBW53770.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 213

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 125/216 (57%), Gaps = 7/216 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K+ L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTALLKVKKELERLNYQVLITREPGGEAIAEQIRQIILDNKNKDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   S++++ +D + E+ 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQG---SARNIGVDVVSEVQ 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+ +C   L L  D+     + R  +R  +  +  +++     +K  Q +L++ +N 
Sbjct: 118 -QIVLKNCLPDLTLFFDVSFSEAEKRMQIRGESSKNRLDKEKSDFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217
           P R  ++D+      V    + I+ E +   +KR S
Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKENEKRTS 212


>gi|315501244|ref|YP_004080131.1| thymidylate kinase [Micromonospora sp. L5]
 gi|315407863|gb|ADU05980.1| thymidylate kinase [Micromonospora sp. L5]
          Length = 717

 Score =  135 bits (340), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 12/216 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++SGLF+ FEG EGAGK+T ++ L   L+ +  DV VTREPG TP  +  R ++L     
Sbjct: 474 VSSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGKRIRSLVLGTNPG 533

Query: 61  EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E  +  AEA+++AA R  HV  V+RPAL+ G +++ DR++DSS AYQG   + + L +D 
Sbjct: 534 EAPSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQG---AGRTLPVDE 590

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +S      + PD  ++LD+    GL RV++R     +   D  E + +  HE+ R  
Sbjct: 591 VSWLSSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----NEGTDRLEAESLTFHERVRYA 645

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           FLD+A   P R  ++D++      A  +   V EL+
Sbjct: 646 FLDLAAGDPKRYLVLDASRPIDETADAVARRVGELL 681


>gi|270291181|ref|ZP_06197404.1| thymidylate kinase [Pediococcus acidilactici 7_4]
 gi|270280577|gb|EFA26412.1| thymidylate kinase [Pediococcus acidilactici 7_4]
          Length = 210

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 125/214 (58%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FISFEG +GAGKTT + ++++ +  R    + VTREPGG P +EA R ++L    
Sbjct: 1   MVNGHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E  A  EA+++AAAR  H+   I PAL  G+++ CDR++DSS AYQG         +  
Sbjct: 61  TEMDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQ 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   + +  +P+ TI LD+  ++GLKR+        +  +D  + + +  HE+ R  +L 
Sbjct: 121 MNLFATEGCLPEKTIYLDVSAEVGLKRIMT----HRTDDVDRLDLEQLDFHERVRDAYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+  P+R  ++D++ S   V   ++N++ ++++
Sbjct: 177 LAKRYPERIVVIDASQSIGDVKKAVINVLDQILK 210


>gi|217976730|ref|YP_002360877.1| dTMP kinase [Methylocella silvestris BL2]
 gi|217502106|gb|ACK49515.1| dTMP kinase [Methylocella silvestris BL2]
          Length = 233

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 125/213 (58%), Gaps = 6/213 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG EG GK+T I  L + L+ +  +   TREPGG+  AE  R VLLS  V   G
Sbjct: 15  GRLITLEGGEGVGKSTQIGRLLQRLRDEGIEAVATREPGGSEGAEILRRVLLSGVVKPLG 74

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEAI+FAAAR+DH++ +I PAL  G  ++ DRF DS+ AYQG   S  +  +++L+  
Sbjct: 75  PAAEAILFAAARIDHIDALIEPALAAGIWVVSDRFADSTRAYQGGAGSLDNRLINALERT 134

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ ++ PD T+ILDLP   GL+R   R    ++  +D FE +D+  HE  R  FL IA +
Sbjct: 135 ALGDLQPDLTLILDLPPGEGLRRAAARRK--DADGVDRFEGEDLRFHEAIRAAFLTIAAD 192

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            P RC +VD++ S   VA  I    W  V  R+
Sbjct: 193 NPQRCVVVDASASEVEVAAAI----WTAVSDRL 221


>gi|257879313|ref|ZP_05658966.1| thymidylate kinase [Enterococcus faecium 1,230,933]
 gi|257881871|ref|ZP_05661524.1| thymidylate kinase [Enterococcus faecium 1,231,502]
 gi|257885061|ref|ZP_05664714.1| thymidylate kinase [Enterococcus faecium 1,231,501]
 gi|257890139|ref|ZP_05669792.1| thymidylate kinase [Enterococcus faecium 1,231,410]
 gi|257893467|ref|ZP_05673120.1| thymidylate kinase [Enterococcus faecium 1,231,408]
 gi|258615719|ref|ZP_05713489.1| thymidylate kinase [Enterococcus faecium DO]
 gi|260558755|ref|ZP_05830944.1| thymidylate kinase [Enterococcus faecium C68]
 gi|261207350|ref|ZP_05922037.1| thymidylate kinase [Enterococcus faecium TC 6]
 gi|289566857|ref|ZP_06447266.1| thymidylate kinase [Enterococcus faecium D344SRF]
 gi|293559585|ref|ZP_06676119.1| thymidylate kinase [Enterococcus faecium E1162]
 gi|293567580|ref|ZP_06678924.1| thymidylate kinase [Enterococcus faecium E1071]
 gi|294615743|ref|ZP_06695593.1| thymidylate kinase [Enterococcus faecium E1636]
 gi|294617668|ref|ZP_06697295.1| thymidylate kinase [Enterococcus faecium E1679]
 gi|294621756|ref|ZP_06700916.1| thymidylate kinase [Enterococcus faecium U0317]
 gi|257813541|gb|EEV42299.1| thymidylate kinase [Enterococcus faecium 1,230,933]
 gi|257817529|gb|EEV44857.1| thymidylate kinase [Enterococcus faecium 1,231,502]
 gi|257820913|gb|EEV48047.1| thymidylate kinase [Enterococcus faecium 1,231,501]
 gi|257826499|gb|EEV53125.1| thymidylate kinase [Enterococcus faecium 1,231,410]
 gi|257829846|gb|EEV56453.1| thymidylate kinase [Enterococcus faecium 1,231,408]
 gi|260075214|gb|EEW63527.1| thymidylate kinase [Enterococcus faecium C68]
 gi|260078410|gb|EEW66114.1| thymidylate kinase [Enterococcus faecium TC 6]
 gi|289161345|gb|EFD09236.1| thymidylate kinase [Enterococcus faecium D344SRF]
 gi|291589681|gb|EFF21485.1| thymidylate kinase [Enterococcus faecium E1071]
 gi|291591394|gb|EFF23053.1| thymidylate kinase [Enterococcus faecium E1636]
 gi|291596075|gb|EFF27341.1| thymidylate kinase [Enterococcus faecium E1679]
 gi|291598643|gb|EFF29700.1| thymidylate kinase [Enterococcus faecium U0317]
 gi|291606461|gb|EFF35861.1| thymidylate kinase [Enterococcus faecium E1162]
          Length = 214

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 2   NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 62  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E + +   PD T+ LD+  D GL+R+ +NR +      +D  + + +  H++ R  +L +
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A   P+R H VD+  SF+ V     + + E
Sbjct: 177 AEENPERIHKVDARKSFEEVLQTSYHTIIE 206


>gi|58336718|ref|YP_193303.1| thymidylate kinase [Lactobacillus acidophilus NCFM]
 gi|73920822|sp|Q5FM02|KTHY_LACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58254035|gb|AAV42272.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus NCFM]
          Length = 216

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 8/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +L     +      VTREPGG+  AE  R ++L    D+
Sbjct: 2   KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              + EA+++AAAR  HVE +I+PA+ EGK++  DRF+DSS AYQG+        +  + 
Sbjct: 62  MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGL R++     +E    D  E++D+  H+K  + FL + 
Sbjct: 122 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  PDR  ++++      V   +  +V EL Q+
Sbjct: 178 KMYPDRFVVINATQPIDQV---VKQVVTELKQR 207


>gi|138893702|ref|YP_001124155.1| thymidylate kinase [Geobacillus thermodenitrificans NG80-2]
 gi|196250745|ref|ZP_03149432.1| dTMP kinase [Geobacillus sp. G11MC16]
 gi|166221745|sp|A4IJA6|KTHY_GEOTN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|134265215|gb|ABO65410.1| Thymidylate kinase [Geobacillus thermodenitrificans NG80-2]
 gi|196209695|gb|EDY04467.1| dTMP kinase [Geobacillus sp. G11MC16]
          Length = 225

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F SFEG EGAGKTT I  L+ FL+ + +DV VTREPGG   AEA R ++L+    E 
Sbjct: 2   NGYFFSFEGPEGAGKTTMIGKLESFLRERGFDVMVTREPGGVRIAEAIRALILNREYTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G+++LCDRF+DSS AYQG         +  + E
Sbjct: 62  DGRTEALLYAAARRQHLLEKIVPALEAGRVVLCDRFVDSSLAYQGFARGLGVEEVWKINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++   MP  T+  D+   IGL+R+ QNR   RE   LD    + +  H+K R+ +  +A
Sbjct: 122 FAIDGYMPSLTVYFDIDPQIGLERIRQNRE--REVNRLDL---ETLSFHDKVREGYRKLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           +   +R  ++D++     V +  +  V
Sbjct: 177 KRFAERIVVIDASRPLDDVFSETVATV 203


>gi|33592905|ref|NP_880549.1| thymidylate kinase [Bordetella pertussis Tohama I]
 gi|33596203|ref|NP_883846.1| thymidylate kinase [Bordetella parapertussis 12822]
 gi|33601614|ref|NP_889174.1| thymidylate kinase [Bordetella bronchiseptica RB50]
 gi|46576478|sp|Q7VXD2|KTHY_BORPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576488|sp|Q7WA31|KTHY_BORPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576494|sp|Q7WJ63|KTHY_BORBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33572553|emb|CAE42133.1| thymidylate kinase [Bordetella pertussis Tohama I]
 gi|33573206|emb|CAE36861.1| thymidylate kinase [Bordetella parapertussis]
 gi|33576051|emb|CAE33130.1| thymidylate kinase [Bordetella bronchiseptica RB50]
          Length = 208

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 9/211 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+TH + + + L+     V  TREPGGTP  E  R +LLS   +   
Sbjct: 5   GRFITLEGVDGAGKSTHTAWMVQALRDLGLTVLATREPGGTPVGEKLRELLLS---EPMA 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++  AAR +HV  VI PAL  G+ ++CDRF D+SYAYQG         + +L++ 
Sbjct: 62  LETETLLMFAARCEHVREVIAPALARGEWVVCDRFTDASYAYQGGGRQLGAARVAALEQW 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T + D+P+D+       R  L  S  LD FER++    E+ R  + + AR+
Sbjct: 122 VHPDLQPDRTWLFDVPLDVA------RARLARSRQLDRFEREEDAFFERTRAAYHERARS 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              R  I+DS+   + V   + + V ELV +
Sbjct: 176 SDGRIRIIDSSRPLEVVRAQLDSEVRELVAQ 206


>gi|257094047|ref|YP_003167688.1| thymidylate kinase [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
 gi|257046571|gb|ACV35759.1| dTMP kinase [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 211

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 117/205 (57%), Gaps = 8/205 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK++HI+ +  FL+R+   V  TREPGGTP  EA R +LL    +   
Sbjct: 10  GKFITFEGIDGAGKSSHIAGVAAFLRRRGLQVLTTREPGGTPLGEALRELLLH---EAMH 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E EA++  AAR +H+  VI PAL  G  ++CDRF D++YAYQ      +      L+E 
Sbjct: 67  LETEALLMFAARREHLARVIEPALERGDWVVCDRFSDATYAYQSGGRGLERKKFAQLEEW 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD T++ DL   I   R+     + ++  LD FE++    HE+ R+ +L+ A  
Sbjct: 127 VHSHLQPDLTLLFDLSSSIASGRI-----VAQARELDRFEQERSDFHERVRRAYLERAIA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P R  I+D+  + +++   I +I+
Sbjct: 182 APQRIQIIDAEQAPEAIKKMIEDII 206


>gi|85706301|ref|ZP_01037395.1| thymidylate kinase [Roseovarius sp. 217]
 gi|85669074|gb|EAQ23941.1| thymidylate kinase [Roseovarius sp. 217]
          Length = 208

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 6/207 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF+SFEGI+G+GK+T    L   L+    DV +TREPGG+P AE  R ++L    D 
Sbjct: 3   GQGLFLSFEGIDGSGKSTQARRLAEALRGVGRDVVLTREPGGSPGAEEIRRLVLEGDKDR 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E VI PAL  G +++CDRF DS+  YQG   S     +D L 
Sbjct: 63  WSAETEILLFTAARRDHLERVIAPALDRGAVVICDRFADSTRMYQGLGRSDLRGLVDQLH 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD T+++D+   +GL R  +R           FE     +  + R  FL +A
Sbjct: 123 GLMIGR-EPDLTVLIDIDPGVGLGRALSR-----GGAEARFESFGEGMQARMRAGFLALA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    R  ++D A    +VA ++  +V
Sbjct: 177 QEFAPRFAVIDGAGDLDAVAEDVARVV 203


>gi|325962187|ref|YP_004240093.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468274|gb|ADX71959.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 231

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG +GAGK+T  +LL   L+ +   V  TREPGGTP  E  R ++L  G    
Sbjct: 6   SGLFIAFEGGDGAGKSTQAALLAETLEARGLAVLRTREPGGTPIGEKLRSLVLDHGHGLI 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++FAA+R  H   VIRPAL  G+++L DR++DSS AYQG   +     + SL E
Sbjct: 66  DAHTEALIFAASRAAHASQVIRPALERGEVVLTDRYIDSSVAYQGAGRALGEDAVRSLNE 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + P  T++LD+   +G  R          A  D  E +    H + R  FLD+AR
Sbjct: 126 WATSGLQPHLTVLLDVDPAVGRSRRTA-----GDAAEDRMESEADEFHARIRDAFLDLAR 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+   ++ + H    +++ IL  V  L+
Sbjct: 181 RRPESYLVLPAHHPVSELSSRILARVDALL 210


>gi|323465901|gb|ADX69588.1| Thymidylate kinase [Lactobacillus helveticus H10]
          Length = 216

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 120/206 (58%), Gaps = 11/206 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F+SFEG +GAGK+T +  +L +   +      VTREPGG+  AE  R ++L    D+ 
Sbjct: 7   GYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  HVE +IRPAL +GKI+  DRF+DSS AYQGE    + L ++ +++
Sbjct: 67  DAKTEALLYAAARSQHVEEIIRPALSDGKIVFSDRFVDSSLAYQGE---GRDLGIEEVKQ 123

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +  ++ PD T  LD+  +IGL R+Q     +E    D  E++++  H+K    FL 
Sbjct: 124 INDFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLK 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
           +    PDR   +D+    + V   ++
Sbjct: 180 VKDLYPDRFVTIDATQPIEDVVNQVI 205


>gi|227903280|ref|ZP_04021085.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796]
 gi|227868909|gb|EEJ76330.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796]
          Length = 220

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 8/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +L     +      VTREPGG+  AE  R ++L    D+
Sbjct: 6   KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              + EA+++AAAR  HVE +I+PA+ EGK++  DRF+DSS AYQG+        +  + 
Sbjct: 66  MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGL R++     +E    D  E++D+  H+K  + FL + 
Sbjct: 126 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  PDR  ++++      V   +  +V EL Q+
Sbjct: 182 KMYPDRFVVINATQPIDQV---VKQVVTELKQR 211


>gi|221307837|ref|ZP_03589684.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312159|ref|ZP_03593964.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317092|ref|ZP_03598386.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221321355|ref|ZP_03602649.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767017|ref|NP_387909.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|239938655|sp|P37537|KTHY_BACSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225184644|emb|CAB11804.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 212

 Score =  135 bits (339), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 126/215 (58%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E ++ ++MP  T+   +  + GLKR+    S RE   LD  E+ D   H K ++ + +
Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 175 LMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209


>gi|254475335|ref|ZP_05088721.1| thymidylate kinase [Ruegeria sp. R11]
 gi|214029578|gb|EEB70413.1| thymidylate kinase [Ruegeria sp. R11]
          Length = 227

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 6/206 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++FEGI+G+GK+T   +L   L+ +  DV +TREPGG+  AE  R ++L    D +
Sbjct: 15  GGLFVTFEGIDGSGKSTQCRMLADTLRARGLDVVLTREPGGSDGAEEIRRLVLEGDPDRW 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  G++++CDRF DS+  YQG         +D L  
Sbjct: 75  SAETELLLFTAARRDHLERRILPALAAGQVVVCDRFADSTRMYQGLSRGDLRASVDQLHR 134

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD TI++D+    GL R + R    E      FE   + + ++ R  FL +A+
Sbjct: 135 LMIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAQ 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
              +R  ++D       VA ++L+IV
Sbjct: 189 EFANRFRVIDGDRPMDVVAQDVLDIV 214


>gi|261338416|ref|ZP_05966300.1| dTMP kinase [Bifidobacterium gallicum DSM 20093]
 gi|270276387|gb|EFA22241.1| dTMP kinase [Bifidobacterium gallicum DSM 20093]
          Length = 200

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 22/208 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----SCGV 59
           +FI+FEGI+GAGKTT + LL + LQ     V VTREPGGT    + R +LL        +
Sbjct: 1   MFITFEGIDGAGKTTQVKLLAQALQEAGRSVEVTREPGGTALGASLRRLLLEGVADGSAI 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           DE    AEA++FAA R  HV  VIRPA+  G  ++CDR++DSS AYQG     + +  D 
Sbjct: 61  DE---HAEALMFAADRAQHVAQVIRPAMQRGDDVICDRYIDSSVAYQG---GGRDIGADQ 114

Query: 120 LQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++ +S+     ++PD TI+LDL   +   R+ NR + R  +  D F R+        R+ 
Sbjct: 115 IRALSMWATGGLVPDLTIVLDLDPALSAARL-NRPADRMESAGDEFARRT-------REA 166

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204
           FL +A  +P+R  ++D++   + +A ++
Sbjct: 167 FLAMAAAEPERFRVIDASLPVERIAADV 194


>gi|22537716|ref|NP_688567.1| thymidylate kinase [Streptococcus agalactiae 2603V/R]
 gi|25011666|ref|NP_736061.1| thymidylate kinase [Streptococcus agalactiae NEM316]
 gi|76787087|ref|YP_330195.1| thymidylate kinase [Streptococcus agalactiae A909]
 gi|76799459|ref|ZP_00781603.1| thymidylate kinase [Streptococcus agalactiae 18RS21]
 gi|77408332|ref|ZP_00785074.1| thymidylate kinase [Streptococcus agalactiae COH1]
 gi|46576569|sp|Q8DYB3|KTHY_STRA5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576575|sp|Q8E3X8|KTHY_STRA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123601435|sp|Q3JZV8|KTHY_STRA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|22534605|gb|AAN00440.1|AE014263_19 thymidylate kinase [Streptococcus agalactiae 2603V/R]
 gi|24413206|emb|CAD47285.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562144|gb|ABA44728.1| thymidylate kinase [Streptococcus agalactiae A909]
 gi|76585186|gb|EAO61800.1| thymidylate kinase [Streptococcus agalactiae 18RS21]
 gi|77173095|gb|EAO76222.1| thymidylate kinase [Streptococcus agalactiae COH1]
 gi|319745548|gb|EFV97850.1| thymidylate kinase [Streptococcus agalactiae ATCC 13813]
          Length = 211

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 121/215 (56%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +     PD T+  D+P ++GL+R+Q     RE   LD  E+ D  +H++ RQ +L+
Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ-REVNRLD-LEQLD--MHQRVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +A ++P+R   +D++     V     +I+ + + +
Sbjct: 177 LADSEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211


>gi|304312953|ref|YP_003812551.1| Thymidylate kinase [gamma proteobacterium HdN1]
 gi|301798686|emb|CBL46918.1| Thymidylate kinase [gamma proteobacterium HdN1]
          Length = 216

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 6/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I+ EG EG GK+T++  ++  L  +      TREPGGTP AE  R +LL+   +
Sbjct: 1   MKPGLLITLEGTEGVGKSTNLQFIRDTLSEQKIPFICTREPGGTPLAETLRELLLAPRDE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F   AE ++  AAR  H+ +VIRPAL  G  ++CDRF D+++AYQG         +  L
Sbjct: 61  PFDPLAELLIMFAARAQHIAHVIRPALERGLWVICDRFTDATFAYQGGGRGVPMNIIAQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  +E+ PD  I+LD+   +GL+R   R      A  D FER+     E+ R ++L+ 
Sbjct: 121 EALVQRELRPDAVILLDISPQLGLERAGQR------AAPDRFERERCEFFERVRSVYLER 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R + VD++     V   + +I+
Sbjct: 175 ADADPARYYRVDASRPLVDVQQELKDIL 202


>gi|90962199|ref|YP_536115.1| thymidylate kinase [Lactobacillus salivarius UCC118]
 gi|227891204|ref|ZP_04009009.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741]
 gi|122448751|sp|Q1WSU7|KTHY_LACS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|90821393|gb|ABE00032.1| Thymidylate kinase [Lactobacillus salivarius UCC118]
 gi|227867078|gb|EEJ74499.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741]
          Length = 208

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEGI+G+GKT+ +  +   L  K  D ++ TREPGG   +EA R ++L+    E 
Sbjct: 3   GKFITFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121
            A  EA+++AAAR  H+ + + PAL EGK++LCDRF+DSS  YQG  RD      +  L 
Sbjct: 63  DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVI-KLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+  +I LKR+ N    R++  +D  +++ +  + K RQ +L +A
Sbjct: 122 EFATENLKPDLTLYYDVEPEISLKRISNN---RQNQ-VDRLDKESMDFYHKVRQAYLSLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  +R  ++D++ +   V  + L+I+
Sbjct: 178 ESNKERIKVIDASQNLDKVIDDTLSIL 204


>gi|167465293|ref|ZP_02330382.1| dTMP kinase [Paenibacillus larvae subsp. larvae BRL-230010]
 gi|322381217|ref|ZP_08055220.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154793|gb|EFX47064.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 221

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 5/216 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F++FEG +G+GKTT I LL   L ++ + V  TREPGGTP ++  R ++LS    E  
Sbjct: 3   GVFVTFEGPDGSGKTTQIRLLADALNKQGFQVLQTREPGGTPISDQIRSLILSPEHQEMK 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E +++AA+R  HV  VI PAL +GKI+LCDRF+D+S AYQ      +   +  +   
Sbjct: 63  DQTEVLLYAASRAQHVHEVILPALKQGKIVLCDRFIDASLAYQAYGLGIEFESVIEVNRF 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++P+ T +LD+PV+I   R+  R        LD  E+K    H++ R+ F  I + 
Sbjct: 123 ASSGLLPNRTYLLDVPVEISRSRLTRR-----EEGLDRIEQKGRDYHQRVREGFHQIYKE 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
            P+R  ++++  + + +A  I    +  ++ ++  +
Sbjct: 178 NPERICLIEAEGNVEDIALRIQTDFFSWLKGKIGKM 213


>gi|314937925|ref|ZP_07845241.1| thymidylate kinase [Enterococcus faecium TX0133a04]
 gi|314941416|ref|ZP_07848309.1| thymidylate kinase [Enterococcus faecium TX0133C]
 gi|314948529|ref|ZP_07851909.1| thymidylate kinase [Enterococcus faecium TX0082]
 gi|314951284|ref|ZP_07854338.1| thymidylate kinase [Enterococcus faecium TX0133A]
 gi|314992885|ref|ZP_07858286.1| thymidylate kinase [Enterococcus faecium TX0133B]
 gi|314998089|ref|ZP_07862977.1| thymidylate kinase [Enterococcus faecium TX0133a01]
 gi|313587931|gb|EFR66776.1| thymidylate kinase [Enterococcus faecium TX0133a01]
 gi|313592689|gb|EFR71534.1| thymidylate kinase [Enterococcus faecium TX0133B]
 gi|313596501|gb|EFR75346.1| thymidylate kinase [Enterococcus faecium TX0133A]
 gi|313599839|gb|EFR78682.1| thymidylate kinase [Enterococcus faecium TX0133C]
 gi|313642783|gb|EFS07363.1| thymidylate kinase [Enterococcus faecium TX0133a04]
 gi|313645026|gb|EFS09606.1| thymidylate kinase [Enterococcus faecium TX0082]
          Length = 231

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 19  NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 78

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 79  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 138

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E + +   PD T+ LD+  D GL+R+ +NR +      +D  + + +  H++ R  +L +
Sbjct: 139 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 193

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A   P+R H VD+  SF+ V     + + E
Sbjct: 194 AEENPERIHKVDARKSFEEVLQTSYHTIIE 223


>gi|182678512|ref|YP_001832658.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634395|gb|ACB95169.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 237

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 5/214 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GK+T    L    + +      TREPGG+P AE  R +LLS  +   G
Sbjct: 22  GFFITLEGGEGTGKSTQARKLVARFEAQGLRAIATREPGGSPNAEILRDILLSGVIKPLG 81

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++F+AAR+DH++ VI+PAL  G  ++ DRF DS+  YQG   +     L  L++ 
Sbjct: 82  PLAEALMFSAARIDHLDQVIKPALAAGTTVVSDRFADSTRVYQGVAGNLDPHRLTLLEQA 141

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
            +   +PD T++LDL  + GL R   R +  +S    D FE +D+  H + R+ F  + +
Sbjct: 142 VLNGTVPDLTLVLDLAPETGLARAAARRANIDSGDGPDRFESEDLTYHRRLREAFRALPK 201

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +P RC ++D+  S   V   +    W  +Q+R+
Sbjct: 202 REPGRCLLIDADASADIVTERL----WTAIQQRL 231


>gi|301300450|ref|ZP_07206650.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851947|gb|EFK79631.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 208

 Score =  135 bits (339), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEGI+G+GKT+ +  +   L  K  D ++ TREPGG   +EA R ++L+    E 
Sbjct: 3   GKFITFEGIDGSGKTSVLKGVIEHLNGKKIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121
            A  EA+++AAAR  H+ + + PAL EGK++LCDRF+DSS  YQG  RD      +  L 
Sbjct: 63  DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVI-KLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+  +I LKR+ N    R++  +D  +++ +  + K RQ +L +A
Sbjct: 122 EFATENLKPDLTLYYDVEPEISLKRISNN---RQNQ-VDRLDKESMDFYHKVRQAYLSLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  +R  ++D++ +   V  + L+I+
Sbjct: 178 ESNKERIKVIDASQNLDKVIDDTLSIL 204


>gi|255023366|ref|ZP_05295352.1| thymidylate kinase [Listeria monocytogenes FSL J1-208]
          Length = 208

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  I   
Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKIINM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERFMRVDATKTPEEITETIL 200


>gi|304315605|ref|YP_003850750.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302777107|gb|ADL67666.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 205

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+FEGI+G+GKTT I+LLK +L     D+ V REPGGT   E  R++LL    +
Sbjct: 1   MYKGKLITFEGIDGSGKTTQINLLKEYLLNIGRDIVVLREPGGTSVGEKIRNILLDKK-N 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    AEA+++AA+R + V+ VI P+L  GKI++ DRF+DSS  YQG         ++ +
Sbjct: 60  KIVPTAEALLYAASRAELVKEVIIPSLNNGKIVILDRFVDSSIVYQGYARGIGVKAVEEI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I++  ++PD TI LD+     +KR+  R         D  E +D+  HEK  + +  +
Sbjct: 120 NNIAIAGLVPDLTIYLDIKPKDTIKRIDRRKD------KDRLEMEDLEFHEKVYEGYKQL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +++PDR  ++D+ H    +  +I+  + +++
Sbjct: 174 IKSRPDRYLVIDATHDIDYIQKSIVKEISKII 205


>gi|85708666|ref|ZP_01039732.1| thymidylate kinase [Erythrobacter sp. NAP1]
 gi|85690200|gb|EAQ30203.1| thymidylate kinase [Erythrobacter sp. NAP1]
          Length = 216

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 4/211 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG EG GK+T    L   L+ +   V VTREPGGTP AEA R +LL    D +G
Sbjct: 7   GLFIAFEGGEGTGKSTQTLKLADALRARGKVVEVTREPGGTPGAEAIRQLLLHPPGDGWG 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+AEA++FAAAR DHV   I+P+L +G  ++ DRF+DSS AYQG         + +L   
Sbjct: 67  AQAEALLFAAARSDHVAQHIKPSLEKGVWVVTDRFVDSSRAYQGGAGGLGDEAITALHAF 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD TI+L++  D    R+  R + R+    D    +    H      F  +A  
Sbjct: 127 GSDGLRPDLTILLEVDED----RLTQRLAERDGGTSDAIGGRSADYHRAVAARFRKLAEA 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P+   IVD   +   V   +L+ + +L+ +
Sbjct: 183 DPNGFRIVDGTGTPDEVHNRVLDALADLLGQ 213


>gi|116874058|ref|YP_850839.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123458754|sp|A0AM28|KTHY_LISW6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116742936|emb|CAK22060.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 208

 Score =  134 bits (338), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + ++    D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD      L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  I + 
Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDISYHEKVQAGYEKIIKM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            PDR   VD+    + +   IL
Sbjct: 179 FPDRFMRVDATMQPEEITEVIL 200


>gi|225181529|ref|ZP_03734971.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1]
 gi|225167777|gb|EEG76586.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1]
          Length = 209

 Score =  134 bits (338), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 13/217 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG +GAGKTT ++ L    ++    V  TREPGGTP  +A R +LL     
Sbjct: 1   MKKGFFITLEGPDGAGKTTQLTRLADAARQMGIQVVCTREPGGTPVGDAVRRILLDTAYS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFL 117
           E     E  ++AAAR      VI PAL +G+++LCDRF+DS+ AYQ   GE D S  +  
Sbjct: 61  EMVPLTEVFLYAAARAQLFHQVIGPALKQGQLVLCDRFIDSTLAYQSYGGEMDFS-FVLE 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +LQ +S +  +PD T +LD+   +G++R       R S   D  E+K +  H + R  F
Sbjct: 120 TNLQAVSHR--LPDLTFVLDIDPSVGVER-------RGSGTADRVEQKALSFHHRVRDGF 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           L +A   P+R  +V    S   V   I N V  L++K
Sbjct: 171 LSLADKFPERIKVVKGTQSEDEVFAVIWNQVAPLLEK 207


>gi|311070675|ref|YP_003975598.1| thymidylate kinase [Bacillus atrophaeus 1942]
 gi|310871192|gb|ADP34667.1| thymidylate kinase [Bacillus atrophaeus 1942]
          Length = 212

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 127/215 (59%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K+ L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKKSLAARGLQVTATREPGGIDIAEQIREVILNEKNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
            A+ EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DAKTEALLYAAARRQHLVEKVKPALEQGHIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E ++ ++MP+ T+   +  + GL R+     LRE   LD    +++  H + R+ + +
Sbjct: 119 INEFAIGDMMPNLTVYFSIKPEEGLSRIHAN-GLREKNRLDL---EELSFHTRVREGYHE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P R   +D++ S + V  ++  ++ E ++K
Sbjct: 175 LMKRFPKRFRTIDASQSKERVIEDVQIVINEALKK 209


>gi|227550403|ref|ZP_03980452.1| thymidylate kinase [Enterococcus faecium TX1330]
 gi|257888432|ref|ZP_05668085.1| thymidylate kinase [Enterococcus faecium 1,141,733]
 gi|257897193|ref|ZP_05676846.1| thymidylate kinase [Enterococcus faecium Com12]
 gi|257899191|ref|ZP_05678844.1| thymidylate kinase [Enterococcus faecium Com15]
 gi|293379610|ref|ZP_06625747.1| dTMP kinase [Enterococcus faecium PC4.1]
 gi|293572059|ref|ZP_06683070.1| thymidylate kinase [Enterococcus faecium E980]
 gi|227180462|gb|EEI61434.1| thymidylate kinase [Enterococcus faecium TX1330]
 gi|257824486|gb|EEV51418.1| thymidylate kinase [Enterococcus faecium 1,141,733]
 gi|257833758|gb|EEV60179.1| thymidylate kinase [Enterococcus faecium Com12]
 gi|257837103|gb|EEV62177.1| thymidylate kinase [Enterococcus faecium Com15]
 gi|291607844|gb|EFF37155.1| thymidylate kinase [Enterococcus faecium E980]
 gi|292641759|gb|EFF59932.1| dTMP kinase [Enterococcus faecium PC4.1]
          Length = 214

 Score =  134 bits (337), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 2   NGLFITIEGPDGAGKTSILNELFPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 62  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E + +   PD T+ LD+  D GL+R+ +NR +      +D  + + +  H++ R  +L +
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A   P+R H VD+  SF+ V     + + E
Sbjct: 177 AEENPERIHKVDARKSFEEVLQTSYHTIIE 206


>gi|145596534|ref|YP_001160831.1| thymidylate kinase [Salinispora tropica CNB-440]
 gi|145305871|gb|ABP56453.1| thymidylate kinase [Salinispora tropica CNB-440]
          Length = 705

 Score =  134 bits (337), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 12/215 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVD 60
           ++GLF+ FEG EGAGK+T ++LL   L+ +  DV VTREPG T   E  R +LL   G +
Sbjct: 446 SAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGVGERIRSLLLGQPGSE 505

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA R  HV  V+RPAL  G ++  DR++DSS AYQG     + L +D +
Sbjct: 506 VPSPRAEALLYAADRAHHVATVVRPALARGAVVTSDRYVDSSLAYQG---VGRTLPVDEV 562

Query: 121 QEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +S      + PD  ++LD+  + GL RV  R  +      D+ E + V  HE+ R  F
Sbjct: 563 SWLSSWATGGLKPDLVVLLDIDPNTGLSRVAARGGVS-----DHLEAESVSFHERVRYAF 617

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD+A   P R  ++D+A     +A  +   V EL+
Sbjct: 618 LDLAAADPRRYLVLDAARPTDEIADEVARRVAELL 652


>gi|300214869|gb|ADJ79285.1| Thymidylate kinase (dTMP kinase) [Lactobacillus salivarius CECT
           5713]
          Length = 208

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 124/207 (59%), Gaps = 7/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62
           G F++FEGI+G+GKT+ +  +   L  K  D ++ TREPGG   +EA R ++L+    E 
Sbjct: 3   GKFVTFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121
            A  EA+++AAAR  H+ + + PAL EGK++LCDRF+DSS  YQG  RD      +  L 
Sbjct: 63  DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVI-KLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+  +I LKR+ N    R++  +D  +++ +  + K RQ +L +A
Sbjct: 122 EFATENLKPDLTLYYDVEPEISLKRISNN---RQNQ-VDRLDKESMDFYHKVRQAYLSLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  +R  ++D++ +   V  + L+I+
Sbjct: 178 ESNKERIKVIDASQNLDKVIDDTLSIL 204


>gi|225848089|ref|YP_002728252.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643400|gb|ACN98450.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 204

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEGIEG+GK+T    L  +L       ++TREPGGT   +  R +LLS   + F 
Sbjct: 2   GVFITFEGIEGSGKSTQAKRLYEYLTNIGIKAYLTREPGGTSIGKKIREILLSHWEENFP 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           + AE +++ A R  HV N+I+P L +  I++ DRF DS+ AYQ       +  +D L ++
Sbjct: 62  SIAELLLYQADRNIHVNNIIKPLLQQDYIVISDRFYDSTTAYQHYARGIDYSIVDYLNKL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + P  T +LDLPV    KR+       ES  L++        H+K R+ FL IA  
Sbjct: 122 ATEGIKPHITFLLDLPVQEAFKRLNREKDRLESEGLNF--------HQKVREGFLKIADM 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
           + DR  ++D   S   +   ILNI+ E
Sbjct: 174 EKDRVIVLDGLKSPDEIFNQILNILKE 200


>gi|46908871|ref|YP_015260.1| thymidylate kinase [Listeria monocytogenes str. 4b F2365]
 gi|47092313|ref|ZP_00230104.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858]
 gi|47095500|ref|ZP_00233109.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854]
 gi|224499368|ref|ZP_03667717.1| thymidylate kinase [Listeria monocytogenes Finland 1988]
 gi|226225244|ref|YP_002759351.1| thymidylate kinase [Listeria monocytogenes Clip81459]
 gi|254824945|ref|ZP_05229946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194]
 gi|254830871|ref|ZP_05235526.1| thymidylate kinase [Listeria monocytogenes 10403S]
 gi|254852005|ref|ZP_05241353.1| thymidylate kinase [Listeria monocytogenes FSL R2-503]
 gi|254899850|ref|ZP_05259774.1| thymidylate kinase [Listeria monocytogenes J0161]
 gi|254912944|ref|ZP_05262956.1| thymidylate kinase [Listeria monocytogenes J2818]
 gi|254931036|ref|ZP_05264395.1| thymidylate kinase [Listeria monocytogenes HPB2262]
 gi|254937325|ref|ZP_05269022.1| thymidylate kinase [Listeria monocytogenes F6900]
 gi|254991884|ref|ZP_05274074.1| thymidylate kinase [Listeria monocytogenes FSL J2-064]
 gi|255025775|ref|ZP_05297761.1| thymidylate kinase [Listeria monocytogenes FSL J2-003]
 gi|255519688|ref|ZP_05386925.1| thymidylate kinase [Listeria monocytogenes FSL J1-175]
 gi|300763550|ref|ZP_07073548.1| thymidylate kinase [Listeria monocytogenes FSL N1-017]
 gi|59798313|sp|Q71W79|KTHY_LISMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|259494275|sp|C1KZP7|KTHY_LISMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46882144|gb|AAT05437.1| thymidylate kinase [Listeria monocytogenes serotype 4b str. F2365]
 gi|47016110|gb|EAL07034.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854]
 gi|47019292|gb|EAL10034.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858]
 gi|225877706|emb|CAS06420.1| Putative thymidylate kinase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|258605303|gb|EEW17911.1| thymidylate kinase [Listeria monocytogenes FSL R2-503]
 gi|258609931|gb|EEW22539.1| thymidylate kinase [Listeria monocytogenes F6900]
 gi|293582582|gb|EFF94614.1| thymidylate kinase [Listeria monocytogenes HPB2262]
 gi|293590945|gb|EFF99279.1| thymidylate kinase [Listeria monocytogenes J2818]
 gi|293594185|gb|EFG01946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194]
 gi|300515827|gb|EFK42876.1| thymidylate kinase [Listeria monocytogenes FSL N1-017]
 gi|328468175|gb|EGF39181.1| thymidylate kinase [Listeria monocytogenes 1816]
 gi|328469553|gb|EGF40494.1| thymidylate kinase [Listeria monocytogenes 220]
          Length = 208

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  +   
Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERFMRVDATKTPEEITETIL 200


>gi|313631628|gb|EFR98875.1| thymidylate kinase [Listeria seeligeri FSL N1-067]
          Length = 208

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  ++L + ++    D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD      L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  I   
Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDISYHEKVQAGYEKIMAM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            PDR   VD+  + + +   IL
Sbjct: 179 FPDRYMRVDATKTPEEITDVIL 200


>gi|121534353|ref|ZP_01666177.1| dTMP kinase [Thermosinus carboxydivorans Nor1]
 gi|121307123|gb|EAX48041.1| dTMP kinase [Thermosinus carboxydivorans Nor1]
          Length = 210

 Score =  134 bits (337), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 9/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG +GAGKTT ++LL  +L+ + + V  TREPGGTP  +A R +LL        
Sbjct: 3   GLFITFEGADGAGKTTQLALLADYLRAQGWPVRCTREPGGTPLGDAIRALLLDPANARMA 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
              EA+++ AAR  HV  VI PAL  G+I+L DR+ DS+  YQG  R   +H  L ++  
Sbjct: 63  PRTEALLYMAARAQHVAEVIAPALARGEIVLSDRYADSTIVYQGVARQLPEH-ELAAINA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD TI+LD   ++   R+  R         D  ER+    HE+ RQ FL +A 
Sbjct: 122 FATGGLEPDLTILLDCRQEVLSGRMAGR------GAKDRIEREAARFHEQVRQGFLRLA- 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              DR  ++++  S Q+V   ++  V + + +R S
Sbjct: 175 AASDRFCVIEADGSVQAVHARVIAAVQQFLDRRGS 209


>gi|312866475|ref|ZP_07726693.1| dTMP kinase [Streptococcus downei F0415]
 gi|311098169|gb|EFQ56395.1| dTMP kinase [Streptococcus downei F0415]
          Length = 206

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 120/203 (59%), Gaps = 4/203 (1%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+ EG +GAGKT+ +  L   L+ + + V  TREPGG   AE+ R V+L         +
Sbjct: 1   MITLEGPDGAGKTSVLERLVPLLEAQGHQVVTTREPGGVAIAESIREVILDVKNTAMDEK 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E +++ AAR  H    + P L +GK++L DRF+DSS AYQG         +D L + ++
Sbjct: 61  TELLLYIAARRQHFVEKVLPDLAQGKLVLVDRFIDSSVAYQGYGRGLSVTDIDWLNDYAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           ++  PD T++ DLP ++GL R++ +  +RE   LD  E+ D  +H++ RQ +L++A++QP
Sbjct: 121 EDTKPDLTLLFDLPSELGLARIE-QAEVREVNRLD-LEKLD--MHQRVRQGYLELAKSQP 176

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++D+A   + V  + L+ +
Sbjct: 177 ERIKVIDAAQELEKVVADALSTI 199


>gi|220932870|ref|YP_002509778.1| dTMP kinase [Halothermothrix orenii H 168]
 gi|254808299|sp|B8CZT1|KTHY_HALOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219994180|gb|ACL70783.1| dTMP kinase [Halothermothrix orenii H 168]
          Length = 207

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EGIEG+GK+T I +L + L++  +DV +TREPGGTP  +  R +LL    +  G
Sbjct: 3   GLFITLEGIEGSGKSTQIEMLYKRLKKDGFDVIITREPGGTPIGKEIRKLLLDPD-NIMG 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+AE +++AA R  HV  +I+PAL  GK++L DRF+DSS AYQG         + ++ E 
Sbjct: 62  AKAEFLLYAADRAQHVVELIKPALESGKVVLADRFIDSSIAYQGYGRGLDIDVVKTVNEW 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T +LDL V+ GL+R +  YS       D  ER+ V  H + RQ +  +A +
Sbjct: 122 VIDGCWPDLTFVLDLDVEKGLERARG-YSPDNQG--DRLERELVTFHRRVRQAYHQLAED 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +  R  ++D+  S + +   I + V
Sbjct: 179 R--RFIMLDADRSREEIHREIYHKV 201


>gi|150387935|ref|YP_001317984.1| dTMP kinase [Alkaliphilus metalliredigens QYMF]
 gi|149947797|gb|ABR46325.1| dTMP kinase [Alkaliphilus metalliredigens QYMF]
          Length = 211

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFISFEG++GAGK+T I   K F + + Y V +TREPGGT  +E  R  +L     
Sbjct: 1   MKNGLFISFEGVDGAGKSTQIHYAKDFFEERGYKVSLTREPGGTRISEIIREAILDRTHQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HVE  I PAL EG+++LCDRF+DSS  YQG         + ++
Sbjct: 61  EMTHRTEALLYAASRAQHVEEFILPALAEGRVVLCDRFVDSSMVYQGRGRGLGFDAVRNI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD TI  ++   + L R+    +++E    D  E++ +  H    + + D+
Sbjct: 121 NQFATGGLEPDLTIFFNIHPQVSLGRI----NVKEKG--DRLEQEKMAFHYTVYESYHDL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A+    R  ++++    + + + +  I+  L+++
Sbjct: 175 AQMNSSRIKVIEANQEVEKIKSEVEKIMTNLLRR 208


>gi|83319417|ref|YP_424009.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|123536025|sp|Q2STA4|KTHY_MYCCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|83283303|gb|ABC01235.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 213

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 125/216 (57%), Gaps = 7/216 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   S++++ +D + E+ 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQG---SARNIGVDVVSEVQ 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+ +C   L L  D+     + R  +R  +  +  ++++    +K  Q +L++ +N 
Sbjct: 118 -QIVLKNCLPDLTLFFDVSFSEAEKRMQIRGESSKNRLDKEENNFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217
           P R  ++D+      V    + I+ E +   +KR S
Sbjct: 177 PKRIKVIDANKDIDQVYNQAIKIILEKLKENEKRTS 212


>gi|300744314|ref|ZP_07073333.1| dTMP kinase [Rothia dentocariosa M567]
 gi|300380039|gb|EFJ76603.1| dTMP kinase [Rothia dentocariosa M567]
          Length = 249

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 123/216 (56%), Gaps = 13/216 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI FEG +GAGKTT ++ L+  L+ + Y V  TREPGGTP  EA R ++L  G  E  
Sbjct: 20  GLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSEVD 79

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AEA++FAA+R  H    IRPAL  G ++L DR+LDSS AYQG     ++L  D++ ++
Sbjct: 80  ARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQG---IGRNLGKDTITDL 136

Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S    ++++P  TI+LD+P+    +R+ +R        +D  E +           F DI
Sbjct: 137 SRWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKACVHTAFADI 190

Query: 181 ARNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215
           AR   D  H +VD   S  +V   +L +V  L++ R
Sbjct: 191 ARQNADGAHYVVDGCGSVDAVHERVLEVVRPLLKSR 226


>gi|241759767|ref|ZP_04757867.1| dTMP kinase [Neisseria flavescens SK114]
 gi|241319775|gb|EER56171.1| dTMP kinase [Neisseria flavescens SK114]
          Length = 208

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 117/199 (58%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+  V +    
Sbjct: 5   FITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNP-VTQVSLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+    
Sbjct: 64  TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +  PD T++LD+P+++ + R+      RE    D FE+++     + R+++L  A  QP
Sbjct: 124 GDFRPDLTLLLDVPLEVSMARINQ---TREK---DRFEQEEAEFFNRVREVYLQRANEQP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++DS+ S  +V   I
Sbjct: 178 ERYAVIDSSQSLDAVKNQI 196


>gi|302878048|ref|YP_003846612.1| thymidylate kinase [Gallionella capsiferriformans ES-2]
 gi|302580837|gb|ADL54848.1| thymidylate kinase [Gallionella capsiferriformans ES-2]
          Length = 200

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 13/204 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG++GAGK+TH++     L++   DV VTREPGGTP  E  R +LL+         
Sbjct: 4   FITFEGVDGAGKSTHLAWFAATLRQHGVDVVVTREPGGTPLGEQLREMLLN---QPMSIG 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++  AAR++HVE +I+PAL+ GK ++ DRF D+S+AYQG     + +  D L+++  
Sbjct: 61  TEAMLMFAARVEHVEQIIKPALLAGKWVISDRFSDASFAYQG---GGRGMDWDKLRQLEQ 117

Query: 126 Q-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             ++ PD T+  D+PV++   R+ N  S      LD FE++     E+ R  +       
Sbjct: 118 WVDLRPDLTLFFDVPVEVARARLSNNVS------LDRFEQEQGEFFERVRAGYHRRVAEN 171

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           P R  ++D+A S   V   + +IV
Sbjct: 172 PPRYAVIDAAQSIALVQQQLQSIV 195


>gi|256384283|gb|ACU78853.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385116|gb|ACU79685.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455961|gb|ADH22196.1| dTMP kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 213

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 7/216 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEAIAEQIRQIILDNKNKDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   S++++ +D + E+ 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQG---SARNIGVDVVSEVQ 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+ +C   L L  D+     + R  +R  +  +  +++     +K  Q +L++ +N 
Sbjct: 118 -QIVLKNCLPDLTLFFDVSFSEAEKRMQIRGESSKNRLDKEKSDFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217
           P R  ++D+      V    + I+ E +   +KR S
Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKENEKRTS 212


>gi|167042818|gb|ABZ07536.1| putative thymidylate kinase [uncultured marine microorganism
           HF4000_ANIW137I15]
          Length = 247

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 114/219 (52%), Gaps = 11/219 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ I+FEGIEG+GKTT  SLL   L+ +   V  TREPGGT   E  R ++L  G +  
Sbjct: 24  AGILITFEGIEGSGKTTQASLLADRLREQGLSVFPTREPGGTHLGEGIRRLVLEPGQEAI 83

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  AAR  HV   IRPAL  GK++LCDRF DS+  YQG         ++ +  
Sbjct: 84  DPVAELFLMEAARAQHVAAKIRPALDAGKVVLCDRFTDSTLVYQGLARGLAWKTIEDVNL 143

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-------ESACLDYFERKDVMIHEKRRQ 175
           ++ + + P  TI+LDL +  GL R + R           E+   + F+ +D   HE  R 
Sbjct: 144 LAAKGIRPHTTILLDLDISAGLARTRTRADSAVQADGSIETGETNRFDLEDREFHEIVRS 203

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            FL +A+  P R  +V +A S + V       VW  ++K
Sbjct: 204 GFLRLAKEDPGRVKVVRAAGSAEEVHEE----VWRALEK 238


>gi|311028959|ref|ZP_07707049.1| thymidylate kinase [Bacillus sp. m3-13]
          Length = 212

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 4/211 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG EGAGKT+ I  L   L  + + + +TREPGG   AE  R+V+L C   E  
Sbjct: 3   GLFITFEGPEGAGKTSVIQKLGAELTEQEFPILLTREPGGIAIAEQIRNVILDCDNTEMD 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AAAR  H+   + PAL E KI+LCDRF+DSS AYQG         + S+ E 
Sbjct: 63  ARTEALLYAAARRQHLVERVIPALKENKIVLCDRFIDSSLAYQGYARGIGVEDVLSINEF 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +++MP  TI  D+  + GLKR+    + RE   LD   ++ +  H K ++ +  +   
Sbjct: 123 ATEKMMPSLTIYFDIEPEAGLKRIAANNN-REINRLD---QEKLDFHYKVKEGYDLVKEK 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +R  +VD++  F+SV   +  ++     K
Sbjct: 179 YGERIRVVDASMDFESVCNQVREVLISYFSK 209


>gi|212637874|ref|YP_002314394.1| Thymidylate kinase [Anoxybacillus flavithermus WK1]
 gi|226732650|sp|B7GFF9|KTHY_ANOFW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|212559354|gb|ACJ32409.1| Thymidylate kinase [Anoxybacillus flavithermus WK1]
          Length = 209

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           S LF SFEG EGAGKTT + +LK +L  ++ DV  TREPGG   AE  R V+L    +  
Sbjct: 2   SYLFFSFEGPEGAGKTTIVRMLKDYLSEQHVDVVATREPGGIDIAEQIRAVILHPNNERM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +GK++LCDRF+DSS AYQG    ++ L +D +  
Sbjct: 62  DARTEALLYAAARRQHLVEKVIPALKDGKVVLCDRFIDSSLAYQG---VARGLGIDEILA 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +++  MP  TI  D+   +GL R++   S RE   LD    +++  HE+ R+ ++ 
Sbjct: 119 INAFAIENWMPILTIYFDIDPSLGLARIRENGS-REVNRLDL---EELSFHEQVRKGYMV 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    P+R   VD+      V  ++  ++  L++K
Sbjct: 175 LLDRFPNRIKKVDATQPITKVFEDVWALIEPLIRK 209


>gi|304385465|ref|ZP_07367810.1| thymidylate kinase [Pediococcus acidilactici DSM 20284]
 gi|304328672|gb|EFL95893.1| thymidylate kinase [Pediococcus acidilactici DSM 20284]
          Length = 209

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 124/212 (58%), Gaps = 5/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FISFEG +GAGKTT + ++++ +  R    + VTREPGG P +EA R ++L     E
Sbjct: 2   NGHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNNTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AAAR  H+   I PAL  G+++ CDR++DSS AYQG         +  + 
Sbjct: 62  MDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + +  +P+ TI LD+  ++GLKR+        +  +D  + + +  HE+ R  +L +A
Sbjct: 122 LFATEGCLPEKTIYLDVSAEVGLKRIMT----HRTDDVDRLDLEQLDFHERVRDAYLALA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +  P+R  ++D++ S   V   ++N++ ++++
Sbjct: 178 KRYPERIVVIDASQSIGDVKKAVINVLDQILK 209


>gi|238062269|ref|ZP_04606978.1| dTMP kinase [Micromonospora sp. ATCC 39149]
 gi|237884080|gb|EEP72908.1| dTMP kinase [Micromonospora sp. ATCC 39149]
          Length = 698

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 11/215 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++SGLF+ FEG EGAGK+T ++ L   L+ +  +V VTREPG T      R +LL    +
Sbjct: 457 VSSGLFVVFEGGEGAGKSTQLAALAEQLRGQGREVVVTREPGATEVGARIRALLLDATAE 516

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG   + + L +D +
Sbjct: 517 GPSPRAEALLYAADRAHHVATVVRPALARGAVVISDRYVDSSLAYQG---AGRTLPVDEV 573

Query: 121 QEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +S      + PD  ++LD+    GL RV  R     S   D  E + V  HE+ R  F
Sbjct: 574 SWLSSWATGGLKPDLVVLLDVDPHTGLSRVAAR-----SEGTDRLEAESVAFHERVRYAF 628

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD+A N P R  ++D++   +  A  +   V E +
Sbjct: 629 LDLAANDPKRYLVLDASRPVEETAALVARRVKEFL 663


>gi|77464120|ref|YP_353624.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1]
 gi|126462963|ref|YP_001044077.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17029]
 gi|123591351|sp|Q3J0G1|KTHY_RHOS4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223108|sp|A3PLT9|KTHY_RHOS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77388538|gb|ABA79723.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1]
 gi|126104627|gb|ABN77305.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17029]
          Length = 217

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F++ EGI+G+GK+  +  L   L  +  DV VTREPGGTP  EA R ++L+   + + 
Sbjct: 5   GFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAWD 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR+ HV  VI PAL +G++++ DR+  S+ AYQG        F+ +L   
Sbjct: 65  PMAELLLMTAARVQHVRRVIAPALAQGRVVISDRYAGSTLAYQGTGRGLSEAFIRTLHAE 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ PD T++LDL   IGL R + R +  E+     FE  D+  HE+ R  FL  A  
Sbjct: 125 ATGDLWPDLTLVLDLEAGIGLARSRRRLT-GETLDEGRFESLDLAFHERIRAAFLAQAAR 183

Query: 184 QPDRCHIVDSAHSFQSV 200
            P R  ++D++ + + V
Sbjct: 184 DPGRHAVIDASGTPEEV 200


>gi|296271416|ref|YP_003654048.1| thymidylate kinase [Thermobispora bispora DSM 43833]
 gi|296094203|gb|ADG90155.1| thymidylate kinase [Thermobispora bispora DSM 43833]
          Length = 686

 Score =  134 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 8/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG EG+GKTT   +L  +L+ + YDV  TREPGGT      R +LL        
Sbjct: 466 GLFIAFEGGEGSGKTTQARMLAIWLRDQGYDVVQTREPGGTKLGMRLRAILLDSAHQGIS 525

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +EA+++AA R +HVE VIRPAL  G  ++ DR++DSS AYQG         +  + E 
Sbjct: 526 GRSEALLYAADRAEHVEKVIRPALRRGSAVISDRYVDSSLAYQGAGRMLDRDEVARINEW 585

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD T++LD+P  +GL+R+         +  D  E + +  HE+ R+    +A  
Sbjct: 586 ATGGLVPDLTVVLDVPPAVGLRRM--------GSPADRLEAEPLEFHERVRRELRALAAA 637

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P+R  +VD     + V   I + V E++
Sbjct: 638 EPERYLVVDGTLPQEEVTRIIQDRVREIL 666


>gi|255017566|ref|ZP_05289692.1| thymidylate kinase [Listeria monocytogenes FSL F2-515]
          Length = 208

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L  +   
Sbjct: 64  KNEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  +   
Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERFMRVDATKTPEEITETIL 200


>gi|269468275|gb|EEZ79959.1| thymidylate kinase [uncultured SUP05 cluster bacterium]
          Length = 205

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 6/204 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ +G+EGAGK+T I+ +  +L+ K  +V +TREPGGT   E  R +LLS    
Sbjct: 1   MQKGKFITIDGVEGAGKSTQINFICGYLKDKGINVALTREPGGTELGEKIRTLLLSPKTK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E ++  AAR +H+   I P L +G  +L DRF D+SYAYQG         +  L
Sbjct: 61  SMHSDTELLLMFAARNEHIHAKIMPILEKGDWVLSDRFTDASYAYQGGGRGLDVDRIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E  +Q+  PD T++LD+PV++G+ RV++R         D  E +D+    + R  ++  
Sbjct: 121 EEWVLQDFTPDMTLLLDVPVELGMSRVESR------GEKDRIELEDMDFFNRVRDAYISR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           ++  PDR  ++DS+ + +     I
Sbjct: 175 SKQFPDRIKLIDSSETVEHTKEQI 198


>gi|329894944|ref|ZP_08270743.1| Thymidylate kinase [gamma proteobacterium IMCC3088]
 gi|328922673|gb|EGG30008.1| Thymidylate kinase [gamma proteobacterium IMCC3088]
          Length = 212

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG GK+T ++L+K  L+++   V VTREPGGT  AE  R VLLS   +
Sbjct: 1   MRKGYFITFEGGEGTGKSTQLALVKEALEQRGIKVCVTREPGGTELAEEIRRVLLSPRNE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGER--DSSQHLFL 117
                 E ++  AAR  H+  VI PA+  G+ +LCDRF D++YAY QG R  D  +   L
Sbjct: 61  TVDPTTELLLMFAARAQHLAQVILPAVDRGEWVLCDRFTDATYAYQQGGRGVDEDKIAIL 120

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L ++      PD T++ D P++I L+R+++R        LD FE++ +   ++ R  +
Sbjct: 121 ERLVQMGFN---PDLTLLFDAPIEISLQRMRDR------GALDRFEQEGLEFMKRVRSTY 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L  AR + +R  ++D+  +   V  ++
Sbjct: 172 LTRARVESERFRVIDATATVDDVRASV 198


>gi|126736701|ref|ZP_01752440.1| thymidylate kinase [Roseobacter sp. CCS2]
 gi|126713816|gb|EBA10688.1| thymidylate kinase [Roseobacter sp. CCS2]
          Length = 202

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 6/204 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+FEGI+G+GK+T        L+ +  DV +TREPGG+P AE  R ++L+   D
Sbjct: 1   MNKPRFITFEGIDGSGKSTQSRRFADHLRAQGGDVVLTREPGGSPGAEEIRQLVLTGDPD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +  E E ++F A+R DH+E  I PAL  GK ++ DRF DS+  YQG         +DSL
Sbjct: 61  RWSPETEILLFTASRRDHLEKTIEPALTAGKTVISDRFADSTRVYQGATRGDLRAMVDSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             + +    PD T I+D+     L+R      L   +  D FE   +   E  R  FL +
Sbjct: 121 HRLMIAR-EPDLTFIIDMDPATALER-----GLARKSGEDRFEDFGLGFQETLRHGFLAL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A + P RC ++D   +   +A+ I
Sbjct: 175 AHDHPKRCVLIDGNRTPDQIASEI 198


>gi|254514398|ref|ZP_05126459.1| thymidylate kinase [gamma proteobacterium NOR5-3]
 gi|219676641|gb|EED33006.1| thymidylate kinase [gamma proteobacterium NOR5-3]
          Length = 210

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 6/208 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EGAGK+T ++ ++R L+    D+  TREPGGT   E  R  LL+        
Sbjct: 1   MFITLEGGEGAGKSTAMTYVERGLREAGVDLICTREPGGTRLGEQLRETLLAPSETGINP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++  AAR  H+   I PAL  G+ +LCDRF D+SYAYQG   +     +  L+E+ 
Sbjct: 61  LAELLMMFAARAQHLSECILPALGRGQWVLCDRFTDASYAYQGAGRNMGESPVAVLEELV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T++LD+P + GL R + R        LD FE++D    E+ RQ +L  A+  
Sbjct: 121 QGGLRPDLTLLLDVPSETGLSRARGR------GALDRFEQEDHAFFERVRQSYLSRAKRS 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
             R  I+D++    +V   +  +V +L+
Sbjct: 175 SGRYQIIDASADLAAVEQALEAVVQDLL 202


>gi|149197612|ref|ZP_01874662.1| thymidylate kinase [Lentisphaera araneosa HTCC2155]
 gi|149139182|gb|EDM27585.1| thymidylate kinase [Lentisphaera araneosa HTCC2155]
          Length = 209

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 14/218 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+   FI  EG EGAGK+T I L+K  L+ +   V + REPGGTP AE  R V+ S  VD
Sbjct: 1   MDCSRFIVVEGSEGAGKSTAIKLIKNLLEEQGQTVTLAREPGGTPMAEDLRTVIKSASVD 60

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118
           E   A  E ++  AAR+  VENVIRPAL  G+ L+CDRF  S++AYQG     + L LD 
Sbjct: 61  EKVDARTELLIMYAARVQLVENVIRPALERGEWLVCDRFFYSTWAYQG---GGRELGLDL 117

Query: 119 --SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              + +I + ++ P  TI +DL  ++GL+R + R        LD FE + +    + R +
Sbjct: 118 IRPIHDICLADMTPGLTIFMDLDPELGLERARGR------GALDRFELEQIDFFHRTRAM 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  +  ++      +D++ S + V  ++LN++   +++
Sbjct: 172 YTQLC-DERKEMQKLDASQSLEEVHAHLLNLIRPYIEQ 208


>gi|237756554|ref|ZP_04585078.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691282|gb|EEP60366.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 204

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 8/197 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIE +GKTT I+LL  +L+    +V  TREPGGT   +  R +LLS   ++F 
Sbjct: 2   GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ A R  H+ N+I+P+L    I+L DR++DS+ AYQ       +  +  L  +
Sbjct: 62  YIAELLLYEADRNIHIHNIIKPSLEADYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + P+ T ++D+P  I LKR+        S   D  E +D+  H+K R+ FL IA N
Sbjct: 122 ATDRLKPNLTFLIDIPAQISLKRL--------SKTKDRIESEDIEFHKKLREGFLKIAEN 173

Query: 184 QPDRCHIVDSAHSFQSV 200
           + DR  ++D       +
Sbjct: 174 EKDRFVVIDGTMDIMEI 190


>gi|315639687|ref|ZP_07894827.1| thymidylate kinase [Enterococcus italicus DSM 15952]
 gi|315484648|gb|EFU75104.1| thymidylate kinase [Enterococcus italicus DSM 15952]
          Length = 214

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 11/210 (5%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SGLFI+ EG +GAGKTT ++ L  R  +  N  V  TREPGG   +E  R ++L    +E
Sbjct: 2   SGLFITIEGPDGAGKTTALNELFPRLEKETNRKVIATREPGGVRISEKIRDLILDPNNEE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119
                EA+++AAAR  H+  VI PAL  G I+LCDRF+DSS AYQG   + + + ++S  
Sbjct: 62  MDVRTEALLYAAARRQHLIEVIMPALAAGHIVLCDRFVDSSLAYQG---AGRRIGIESVA 118

Query: 120 -LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + E + + + PD T+ LD+  D GL+R+Q        A +D  E + +  H++ R  +L
Sbjct: 119 QINEFATEGLQPDFTLYLDIDSDEGLRRIQT----SRKAGIDRLETEGLEFHQRVRHAYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +   +P+R  ++ +    Q V      I+
Sbjct: 175 KLVEKEPERFSLIHANQDVQEVVNECYTII 204


>gi|293550622|ref|ZP_06673290.1| thymidylate kinase [Enterococcus faecium E1039]
 gi|291603243|gb|EFF33427.1| thymidylate kinase [Enterococcus faecium E1039]
          Length = 214

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 2   NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 62  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E + +   PD T+ LD+  D GL+R+ +NR +      +D  + + +  H++ R  +L +
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A   P+R H VD+   F+ V     + + E
Sbjct: 177 AEENPERIHKVDARKGFEEVLQTSYHTIIE 206


>gi|290891876|ref|ZP_06554873.1| thymidylate kinase [Listeria monocytogenes FSL J2-071]
 gi|290558470|gb|EFD91987.1| thymidylate kinase [Listeria monocytogenes FSL J2-071]
          Length = 208

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD      L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  +   
Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERFMRVDATKTPEEITETIL 200


>gi|262368570|ref|ZP_06061899.1| thymidylate kinase [Acinetobacter johnsonii SH046]
 gi|262316248|gb|EEY97286.1| thymidylate kinase [Acinetobacter johnsonii SH046]
          Length = 199

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 109/205 (53%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  +   L+++   V +TREPGGTP AE  R +LLS   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIYEHLEQQGQQVVLTREPGGTPMAEQIRSLLLSVNHEESMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL + K +LCDRF D+S+AYQ          L  L E 
Sbjct: 61  NDTELLLMYAARAQHLQQVIVPALTKHKTVLCDRFTDASFAYQCAGRGLSQSKLQLLNEN 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T  LD P++ G+ R       RE   LD FE++ V   EK R  +  +   
Sbjct: 121 FVSH-MPDITFWLDAPIETGMSRA------RERGALDRFEQEKVTFFEKVRAGYQQLWEQ 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+R   +D+  S + V    L  +
Sbjct: 174 YPERVKRLDATQSPEQVFAQALQYL 198


>gi|221639987|ref|YP_002526249.1| Thymidylate kinase [Rhodobacter sphaeroides KD131]
 gi|254808303|sp|B9KKV1|KTHY_RHOSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221160768|gb|ACM01748.1| Thymidylate kinase [Rhodobacter sphaeroides KD131]
          Length = 217

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F++ EGI+G+GK+  +  L   L  +  DV VTREPGGTP  EA R ++L+   + + 
Sbjct: 5   GFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAWD 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR+ HV  VI PAL +G++++ DR+  S+ AYQG        F+ +L   
Sbjct: 65  PMAELLLMTAARVQHVRRVIAPALAQGQVVISDRYAGSTLAYQGTGRGLSEAFIRTLHAE 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ PD T++LDL   IGL R + R +  E+     FE  D+  HE+ R  FL  A  
Sbjct: 125 ATGDLWPDLTLVLDLEAGIGLARSRRRLT-GETLDEGRFESLDLAFHERIRAAFLAQAAR 183

Query: 184 QPDRCHIVDSAHSFQSV 200
            P R  ++D++ + + V
Sbjct: 184 DPGRHAVIDASGTPEEV 200


>gi|56961832|ref|YP_173554.1| thymidylate kinase [Bacillus clausii KSM-K16]
 gi|59798132|sp|Q5WLY2|KTHY_BACSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56908066|dbj|BAD62593.1| thymidylate kinase [Bacillus clausii KSM-K16]
          Length = 213

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 4/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG EGAGKTT I+L++  L  + Y+V  TREPGG   AE  R +LL     
Sbjct: 1   MKKGLFITVEGGEGAGKTTIINLVQEQLATQGYEVIRTREPGGVELAEQIRDLLLHTQGV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AAAR +H+   I PAL EG ++LCDR++DSS  YQG         + ++
Sbjct: 61  EMDNRTEALLYAAARREHLIKKIVPALAEGALVLCDRYIDSSLVYQGHARGIGMEEVRAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +++  MPD T+  D+  +IGL+RVQ + ++R    LD   ++ +  H++ ++ +  +
Sbjct: 121 NGFAIETYMPDLTLYFDVEPEIGLERVQ-KDAVRSWNRLD---QETLTFHKRVQEGYKKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
            + +P+R   +D+  SF  V
Sbjct: 177 LKAEPERIKAIDANRSFAEV 196


>gi|116617408|ref|YP_817779.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|227431245|ref|ZP_03913299.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|122272391|sp|Q03ZG6|KTHY_LEUMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116096255|gb|ABJ61406.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|227353007|gb|EEJ43179.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 213

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 118/205 (57%), Gaps = 13/205 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   +FISFEG EGAGKT+ +  L   L+ K   D+  TREPGG P +EA R +L     
Sbjct: 1   MPKPIFISFEGPEGAGKTSVLEALISELKTKLGDDLVTTREPGGNPISEAIRSILQPEED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+   I+PAL + KI++ DR++DSS AYQG     + L +D+
Sbjct: 61  NGMDKRTEALLYTAARRQHLVENIKPALDQNKIVISDRYVDSSLAYQG---GGRGLGIDN 117

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQ 175
           + EI   ++  ++PD TI LD+PV+IGL RV +NR        +D  +++ +  H+K R+
Sbjct: 118 IWEINQFAIDGLLPDMTIYLDVPVEIGLARVNENR-----QGKIDRLDKESISFHQKVRE 172

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSV 200
            +L +     DR  IVD+      V
Sbjct: 173 TYLKLQSEFSDRIKIVDATQPLNKV 197


>gi|92113730|ref|YP_573658.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043]
 gi|122420045|sp|Q1QX49|KTHY_CHRSD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91796820|gb|ABE58959.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043]
          Length = 212

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 6/205 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T+++ +  +L  +  +V  TREPGGTP AEA R +LL     
Sbjct: 1   MTPGRFITLEGGEGVGKSTNVAFVCDWLSARGIEVVRTREPGGTPRAEAIRELLLDPAPQ 60

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E     AE ++  AAR  H+   IRPAL  G  ++CDRF D+++AYQG         + +
Sbjct: 61  EPLDETAELLLMFAARAQHLAARIRPALARGAWVVCDRFTDATFAYQGGGRGLDETRIAT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+ +  Q + PD T++LD+PV+   +RV+ R   R     D FER+        R+ +L 
Sbjct: 121 LEALVQQGLQPDLTLLLDMPVEAAQRRVERRGIER-----DRFERERGAFFNAVRESYLA 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
            A   P R  ++D+  S ++V  +I
Sbjct: 176 RAAQAPTRFAVIDADRSLEAVQASI 200


>gi|77406664|ref|ZP_00783707.1| thymidylate kinase [Streptococcus agalactiae H36B]
 gi|77174736|gb|EAO77562.1| thymidylate kinase [Streptococcus agalactiae H36B]
          Length = 211

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +     PD T+  D+P ++GL+R+Q     RE   LD  E+ D  +H++ RQ +L+
Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ-REVNRLD-LEQLD--MHQRVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +A  +P+R   +D++     V     +I+ + + +
Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211


>gi|294787793|ref|ZP_06753037.1| dTMP kinase [Simonsiella muelleri ATCC 29453]
 gi|294484086|gb|EFG31769.1| dTMP kinase [Simonsiella muelleri ATCC 29453]
          Length = 207

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FIS +GI+GAGKTT ++++K++ +++N  V  TREPGGTP  E  R +LL+    +    
Sbjct: 5   FISLDGIDGAGKTTQLNVIKQWFEKQNLPVQFTREPGGTPLGEKLRDILLNP-TSQINLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H++++I P L +   ++ DRF D+++AYQG         +  L+    
Sbjct: 64  TETLLMFAARQQHLDDIILPTLNQNISIVSDRFTDATFAYQGGGRGLPESDIAQLENWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI+LD+P++I ++R++N    RE    D FER++     + R  +L+ A   P
Sbjct: 124 GSLRPDLTILLDVPLEIAIQRIENS---REK---DRFERENSTFFNQVRTAYLNRAAANP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
            R  I+DS+H  +S    I
Sbjct: 178 KRYAIIDSSHDKESTKAQI 196


>gi|196233920|ref|ZP_03132757.1| dTMP kinase [Chthoniobacter flavus Ellin428]
 gi|196221969|gb|EDY16502.1| dTMP kinase [Chthoniobacter flavus Ellin428]
          Length = 218

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 118/224 (52%), Gaps = 7/224 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59
           M  G+F+SFEG EG GK+T I LL   L+   + V +TREPGGT   E  RH+L  S   
Sbjct: 1   MPRGIFVSFEGSEGCGKSTQIRLLADRLKALGHQVILTREPGGTEIGEQLRHLLQFSKAG 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +E E ++FAA+R   V  VI PAL  G I+L DRFLDS+  YQG         + +
Sbjct: 61  HAMASETELLLFAASRAQLVREVIAPALEAGAIVLADRFLDSTTVYQGVARKLDPAEVAA 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +V + +PD T + DL  D+ + R + R+    +   D  E +     E  R  +L 
Sbjct: 121 INRFAVGDTLPDITFVFDL--DLAIARERMRHRPAPAGAPDRMESQPAAFFEAVRAGYLA 178

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +AR    R  ++D+A + + ++    N +W+ +  R+SPL   K
Sbjct: 179 LARENTTRVRLLDAAGTVEDLS----NRIWQELAPRLSPLPVTK 218


>gi|298530498|ref|ZP_07017900.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509872|gb|EFI33776.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 223

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 7/213 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T    L+ +L+   Y V VT EPGG+      R +LLS   D+   
Sbjct: 1   MFITFEGIEGCGKSTQTEFLRDYLEGLGYSVLVTLEPGGSRLGVELRRMLLSLESDDLTR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  VIRPAL  G+I++ DRF  S+ AYQG     + + +D+LQE++
Sbjct: 61  EAELFLYLADRAQHVHQVIRPALEAGRIVISDRFTHSTLAYQG---YGREMGVDALQEMN 117

Query: 125 VQEV---MPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQIFLDI 180
           +  V   +PD T +LDLP + GL+R   R   +  ++    FE + +  H + RQ +L++
Sbjct: 118 IMAVDGTVPDITFLLDLPPETGLRRALGRNMEKNLTSSEGRFEAEALEFHVRVRQGYLEL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A  + ++  ++D+    ++V   ++  V E+++
Sbjct: 178 ASRKKEKIVVLDAQALPETVFQGVVGKVNEIMK 210


>gi|315605270|ref|ZP_07880316.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313087|gb|EFU61158.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 268

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 9/222 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG +G+GK+T I  ++ +   +  +V VTREPGGT      R  L+  G ++  
Sbjct: 7   GVFITFEGGDGSGKSTQILAVRDWFASRGREVVVTREPGGTELGAEIRR-LVQNGPEDVD 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AA R  HV  V+ PAL  G ++L DR++DSS AYQG   S     + SL   
Sbjct: 66  ARTEALLYAADRAYHVTTVVAPALERGAVVLGDRYIDSSLAYQGAARSLGVDEISSLSAW 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + P  T +LDLP ++GL+R  +          D  ER+ +  HE+ R  +L +A  
Sbjct: 126 ATRGLYPSLTFLLDLPPEVGLRRHTD--------APDRMERESMDFHERVRHEYLRLADA 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           +PDR  ++D+  + + V + I  ++ E  +  V+ +    D+
Sbjct: 178 EPDRIVVIDAVGTVEEVFSEIRGVLVERFEGGVATIDEAADV 219


>gi|300172669|ref|YP_003771834.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887047|emb|CBL91015.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811]
          Length = 214

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 13/220 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ + +L   L+    D +  TREPGG P +EA R +L     
Sbjct: 1   MTKPLFITFEGPEGAGKTSVLEILISELKPLLGDELITTREPGGNPISEAIRAILQPAED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+  +I PAL  GK+++ DR++DSS AYQG     + L +D+
Sbjct: 61  NGMDERTEALLYTAARRQHLVEIILPALKSGKVVISDRYIDSSLAYQG---GGRGLGVDN 117

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175
           + +I   + + +MPD TI  D+P ++GL RV+ NR        +D  +++++  H+  RQ
Sbjct: 118 IWQINQFATEGLMPDLTIYFDVPPELGLARVKANR-----QGKIDRLDKENLSFHQTVRQ 172

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +L +  +  DR  I+D+A S   V  +   ++ + ++ R
Sbjct: 173 TYLQLQHDFSDRIKIIDAAQSLDQVVADTRELLLKTLKTR 212


>gi|319638548|ref|ZP_07993310.1| thymidylate kinase [Neisseria mucosa C102]
 gi|317400297|gb|EFV80956.1| thymidylate kinase [Neisseria mucosa C102]
          Length = 208

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+    +    
Sbjct: 5   FITLDGIDGAGKSTNLAVMKAWFEKHKLPVLFTREPGGTPAGEALREILLNPAT-QVSLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+    
Sbjct: 64  TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +  PD T++LD+P+++ + R+      RE    D FE++      + R+++L  A  QP
Sbjct: 124 GDFRPDLTLLLDVPLEVSMARINQ---TREK---DRFEQEAAEFFNRVREVYLQRAAKQP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++DS  S  +V T I
Sbjct: 178 ERYAVIDSGQSLDAVKTQI 196


>gi|72163182|ref|YP_290839.1| thymidylate kinase [Thermobifida fusca YX]
 gi|71916914|gb|AAZ56816.1| thymidylate kinase [Thermobifida fusca YX]
          Length = 686

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 7/201 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+  EG EG+GK+T +  +  +L+ + +DV  TREPG T      R +LL    +   
Sbjct: 465 GLFVVLEGGEGSGKSTQVREIAVWLRDEGFDVLTTREPGATKLGMRLRTMLLDKANEGMA 524

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AA R +HV+ VIRPAL  G I++ DR++DS+ AYQG         + ++   
Sbjct: 525 ARTEALLYAADRAEHVDKVIRPALERGAIVISDRYVDSTLAYQGAGRELDPDDVATINNW 584

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD TI+LD+P + GL+R  +R +       D  E +++  HE+ R+ FL++A  
Sbjct: 585 ATGRLVPDLTILLDIPAEEGLRRHADRPA-------DRLESENLEFHERVRRCFLELADR 637

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
            PDR  ++D+    + +   I
Sbjct: 638 APDRYLVLDAREPQEEITKAI 658


>gi|16804730|ref|NP_466215.1| thymidylate kinase [Listeria monocytogenes EGD-e]
 gi|224502896|ref|ZP_03671203.1| thymidylate kinase [Listeria monocytogenes FSL R2-561]
 gi|255028105|ref|ZP_05300056.1| thymidylate kinase [Listeria monocytogenes LO28]
 gi|284800421|ref|YP_003412286.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578]
 gi|284993607|ref|YP_003415375.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923]
 gi|23821785|sp|Q8Y3Y6|KTHY_LISMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|16412193|emb|CAD00906.1| lmo2693 [Listeria monocytogenes EGD-e]
 gi|284055983|gb|ADB66924.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578]
 gi|284059074|gb|ADB70013.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923]
          Length = 208

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  +   
Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERFMRVDATKTPEEITETIL 200


>gi|225849733|ref|YP_002729967.1| thymidylate kinase [Persephonella marina EX-H1]
 gi|225646361|gb|ACO04547.1| thymidylate kinase [Persephonella marina EX-H1]
          Length = 216

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 120/205 (58%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEGAGK+T   +L  +L +   +  +TREPGGT   +  R +LL+   + F 
Sbjct: 12  GFFITFEGIEGAGKSTQSKMLYEYLIKNGKNAVLTREPGGTDLGKKIREILLNPSKEIFP 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ A R  HV N+I+P L  G  ++ DRF DS+ AYQG         ++ L +I
Sbjct: 72  PVAELMLYEADRNIHVHNIIKPYLNRGFYVISDRFTDSTLAYQGYARGIDIELVERLNDI 131

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + PD T I+D+PV+ G+KR+ +RY  RE    D  E++ V  H++ R+ FL IA+ 
Sbjct: 132 ASEGIKPDITFIIDIPVEEGMKRI-HRY--REK---DRIEQEGVDFHKRLREGFLRIAQK 185

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           + +R  ++D     + +   IL I+
Sbjct: 186 ERERVVLLDGRKDKEIIFNEILEIL 210


>gi|467418|dbj|BAA05264.1| unknown [Bacillus subtilis]
          Length = 212

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DS  AYQG    ++ L +D   S
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSPLAYQG---YARGLGIDEVLS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E ++ ++MP  T+   +  + GLKR+    S RE   LD  E+ D   H K ++ + +
Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 175 LMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209


>gi|77411409|ref|ZP_00787756.1| thymidylate kinase [Streptococcus agalactiae CJB111]
 gi|77162582|gb|EAO73546.1| thymidylate kinase [Streptococcus agalactiae CJB111]
          Length = 211

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVVPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +     PD T+  D+P ++GL+R+Q     RE   LD  E+ D  +H++ RQ +L+
Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ-REINRLD-LEQLD--MHQRVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +A  +P+R   +D++     V     +I+ + + +
Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211


>gi|315283971|ref|ZP_07871975.1| thymidylate kinase [Listeria marthii FSL S4-120]
 gi|313612387|gb|EFR86525.1| thymidylate kinase [Listeria marthii FSL S4-120]
          Length = 208

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+  G +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITXXGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD      L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  + + 
Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVIKM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            PDR   VD+  + + +   IL
Sbjct: 179 FPDRFMRVDATKTPEEITETIL 200


>gi|323706279|ref|ZP_08117845.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534331|gb|EGB24116.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 205

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+FEGI+G+GKTT I+LLK++L     D+ V REPGGT   E  R +LL    +
Sbjct: 1   MYKGKLITFEGIDGSGKTTQINLLKKYLLEIGRDIVVLREPGGTAIGEKIREILLDKK-N 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA+R + V+ VI P+L +GKI++ DRF+DSS  YQG         ++ +
Sbjct: 60  NIVPSAEALLYAASRAELVKEVIIPSLNDGKIVILDRFVDSSIVYQGYARGLGVEVVEEI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I++  ++PD T+ LD+     L R+  R         D  E +D   HEK  + ++ +
Sbjct: 120 NSIAIDGLVPDLTVYLDIKPKDTLMRIDRR------KDKDRLEIEDAEFHEKVYEGYMKL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +++P R  IVD+ H    +   I++ V +++
Sbjct: 174 IKSKPGRYFIVDATHDIYYIQKVIIDEVSKII 205


>gi|225075646|ref|ZP_03718845.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens
           NRL30031/H210]
 gi|224953068|gb|EEG34277.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens
           NRL30031/H210]
          Length = 208

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 117/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+    +    
Sbjct: 5   FITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QVSLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+    
Sbjct: 64  TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +  PD T++LD+P+++ + RV      RE    D FE++      + R+++L  A  QP
Sbjct: 124 GDFRPDLTLLLDVPLEVSMARVNQ---TREK---DRFEQEKAEFFNRVREVYLQRANEQP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS+ S  +V   I  ++
Sbjct: 178 ERYAVIDSSQSLDAVKNQIETVL 200


>gi|217966109|ref|YP_002351787.1| thymidylate kinase [Listeria monocytogenes HCC23]
 gi|254808300|sp|B8DAU8|KTHY_LISMH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|217335379|gb|ACK41173.1| thymidylate kinase [Listeria monocytogenes HCC23]
 gi|307572281|emb|CAR85460.1| tmk [Listeria monocytogenes L99]
          Length = 208

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD      L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAVGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  +   
Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERFMRVDATKTPEEITETIL 200


>gi|160914736|ref|ZP_02076950.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991]
 gi|158433276|gb|EDP11565.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991]
          Length = 210

 Score =  133 bits (334), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 6/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+FEG +G+GKTT   L    L+   Y V  TREPGG   AE  RH++L     
Sbjct: 1   MKKGLFITFEGNDGSGKTTISMLAYESLKAAGYPVIYTREPGGIDIAEQIRHIILDPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AA+R  H+   + PAL + +I+LCDRFLDSS AYQG         +  +
Sbjct: 61  AMDGRCEALLYAASRRQHLVEKVLPALEKKQIVLCDRFLDSSLAYQGVARGIGVDEVYGI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++  MPD TI LD+ +++GL RV +R        LD  +++ +  H+   + +  +
Sbjct: 121 NEFAIEGCMPDATIYLDVSLEVGLARVASR------GNLDRMDQESMDFHQAVAKGYAIV 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                 R HIV++    + V  + L ++ E+VQ  V
Sbjct: 175 REKFAKRMHIVNADQEVEKVLADTLKVLEEIVQPYV 210


>gi|269128739|ref|YP_003302109.1| thymidylate kinase [Thermomonospora curvata DSM 43183]
 gi|268313697|gb|ACZ00072.1| thymidylate kinase [Thermomonospora curvata DSM 43183]
          Length = 671

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 16/225 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG EGAGKTT   L   +L+   YDV  T EPG T      R +LL        
Sbjct: 451 GVFIAFEGGEGAGKTTQARLTAIWLRDHGYDVVTTNEPGATKVGMRLRAILLDKETTGLS 510

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AE +++AA R +HV NVI+PAL  G I++ DR++DSS AYQG     + L ++ + E+
Sbjct: 511 ARAETLLYAADRANHVANVIKPALERGAIVVSDRYVDSSLAYQG---YGRELPVEEIAEV 567

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T++LDLP   GL R  +     ES  LD+        HE+ R+ F  +
Sbjct: 568 NRWATDGLQPDLTVLLDLPPQTGLGRFASPADRMESEPLDF--------HERVRRGFRKL 619

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           A   PDR  ++D+    + ++  I + + +++   + P  S +DI
Sbjct: 620 AEADPDRYLVLDATRPQEELSRQIRDRLRQILPDPIPP--STEDI 662


>gi|167747824|ref|ZP_02419951.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662]
 gi|317473408|ref|ZP_07932702.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
 gi|167653186|gb|EDR97315.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662]
 gi|316899058|gb|EFV21078.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
          Length = 216

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 12/204 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EG +GAGK+T I LL+ +L +K YD+ V REPGGT  +EA R V+L+      G
Sbjct: 7   GIFITMEGPDGAGKSTQIDLLRVYLLQKGYDIIVCREPGGTVISEAIREVILNRDYKNMG 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR   VE VI+PAL +GK+++CDRF++SS  YQG    ++ L +D + E+
Sbjct: 67  HMTELLLYAAARAQLVEEVIQPALDQGKVVICDRFIESSAVYQG---IARGLGVDLVYEV 123

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V   MPD T++LD+  + G+ R       ++ A LD  E + +  H K  + +  +
Sbjct: 124 NRFAVGNTMPDITLLLDVDAETGIGRK------KQQAELDRMESEKLEFHRKVVEGYRLL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A    +R   +D  +S + +   I
Sbjct: 178 AERDKNRMVKIDGRNSIEEIHRQI 201


>gi|308235275|ref|ZP_07666012.1| thymidylate kinase [Gardnerella vaginalis ATCC 14018]
 gi|311114155|ref|YP_003985376.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019]
 gi|310945649|gb|ADP38353.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019]
          Length = 233

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 110/194 (56%), Gaps = 12/194 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +N GLFISFEGI+G GKTT +  L+ FLQ +  +V VTREPGGTP  E  R++LL  G  
Sbjct: 13  LNKGLFISFEGIDGVGKTTQVEALRDFLQARGLEVVVTREPGGTPLGEQLRNILLHGGA- 71

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119
              A  EA++FAA R  H   +I PAL  G +++ DR++DSS AYQ G R+ +     D 
Sbjct: 72  -ISARTEALLFAADRAQHAAQIIIPALRRGAVVITDRYIDSSLAYQSGGRELTMQDVRD- 129

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + P+ T +LD+       R+  +    ESA LD+  R         R+ FLD
Sbjct: 130 LSEWASNCLWPNRTYLLDMSEKDAAVRLHGQADRMESAGLDFARRT--------REAFLD 181

Query: 180 IARNQPDRCHIVDS 193
           +A+    R  ++D+
Sbjct: 182 LAKQNAQRFCVLDA 195


>gi|300087976|ref|YP_003758498.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527709|gb|ADJ26177.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 207

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 11/213 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T   LL   L        +TREPGGTP  E    +L    + 
Sbjct: 1   MKQGKFITFEGCEGAGKSTQAGLLAGMLASNGMKTILTREPGGTPLGEEISRLLKWGKIG 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A +E ++F A+R + V  VI PAL  GKI++CDRF DSS  YQG         +  +
Sbjct: 61  DIDALSELLLFNASRAELVFTVIEPALKAGKIVICDRFTDSSLVYQGGGRGLSTETVIRV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+ + + PD TI+LD+P+  G  R  N  +       D FE++    H+  RQ +L +
Sbjct: 121 NDIATRGLKPDMTILLDIPISTGQHRKSNSVA-------DRFEQEADEFHKSVRQSYLAL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A   P+R  +V+   S     + +   VW+ V+
Sbjct: 174 AEADPERWKVVNGTLS----RSEVTEAVWKHVK 202


>gi|313606342|gb|EFR83276.1| thymidylate kinase [Listeria monocytogenes FSL F2-208]
          Length = 208

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +P+ T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  +   
Sbjct: 123 AIEDTLPNRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERFMRVDATKTPEEITETIL 200


>gi|183602882|ref|ZP_02964242.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219682707|ref|YP_002469090.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190283|ref|YP_002967677.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195689|ref|YP_002969244.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183217883|gb|EDT88534.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219620357|gb|ACL28514.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248675|gb|ACS45615.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250243|gb|ACS47182.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289178000|gb|ADC85246.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793270|gb|ADG32805.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis V9]
          Length = 206

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 121/217 (55%), Gaps = 15/217 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFISFEG++GAGKTT ++LL  +L+    +V VTREPGGT      R +LL+   D
Sbjct: 1   MGAGLFISFEGVDGAGKTTQVNLLADYLRALGREVVVTREPGGTALGTQIRAMLLTTNPD 60

Query: 61  -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E     EA++FAA R  HV  VIRPAL  G +++ DR+LDSS AYQ      + L  D 
Sbjct: 61  EEISPRTEALLFAADRAQHVSEVIRPALERGAVVITDRYLDSSLAYQS---GGRELTADD 117

Query: 120 LQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++ +S+     ++P  T +LD+       R+++     ESA  D+ +R         R  
Sbjct: 118 IRTLSMWATNNLLPARTYLLDIDPRASHTRLEHAEDRMESAGDDFQQRT--------RTA 169

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           FL++A  QP R  ++D+  S   +A  I + V  L++
Sbjct: 170 FLELAAVQPQRFCVIDAQQSVGEIAALICDDVANLLE 206


>gi|297543636|ref|YP_003675938.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296841411|gb|ADH59927.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 204

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 8/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  LK +L +K Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLDK-YNFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PA+ EGKI+L DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPAIKEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R +       D  ER+    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLERESWDFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R   +D       V  +I++ V
Sbjct: 174 EYPKRFVFIDGMQEIVKVHQDIIDAV 199


>gi|237748461|ref|ZP_04578941.1| thymidylate kinase [Oxalobacter formigenes OXCC13]
 gi|229379823|gb|EEO29914.1| thymidylate kinase [Oxalobacter formigenes OXCC13]
          Length = 207

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 9/210 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG FI+FEGI+GAGK+THI  +   L+  N  V VTREPGGT   E  R +LL    D+
Sbjct: 6   HSGRFITFEGIDGAGKSTHIQFVTDLLRADNRQVVVTREPGGTVLGEKLREMLLH---DK 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  AAR +H+  VI PAL  G  ++ DRF D+S+AYQG         +  L+
Sbjct: 63  MNLETEALLMFAARREHIAEVIEPALQRGDWVISDRFTDASFAYQGGGRGLDLHKMRQLE 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E     + PD T++ D+  ++   R      L  +   D FER+      + R  +L  A
Sbjct: 123 EWVHPHLQPDLTLLFDVSPEVAQAR------LEAARSPDKFEREKSGFFNRVRDEYLRRA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  PDR  ++DS+ S +++   I  ++ EL
Sbjct: 177 KEFPDRFRVIDSSRSIEAIRETIKGLIGEL 206


>gi|256827342|ref|YP_003151301.1| thymidylate kinase [Cryptobacterium curtum DSM 15641]
 gi|256583485|gb|ACU94619.1| thymidylate kinase [Cryptobacterium curtum DSM 15641]
          Length = 295

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 108/209 (51%), Gaps = 4/209 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG +GAGK+THI  L R L++  Y V   REPGGT A EA R V+L    +   
Sbjct: 59  GAFITFEGGDGAGKSTHIKFLARALEQCGYSVVRLREPGGTQAGEALRQVVLDPSYEGLS 118

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE+E +++ AAR   V+ VI PAL  GKI+LCDRF DS+ AYQ         F+      
Sbjct: 119 AESELLIYEAARAQLVKEVIAPALAAGKIVLCDRFCDSTIAYQAYGRGLSRDFVQEANLF 178

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q + PD T+++  P      R Q   + R     D  E   V  H + R+ F  IA +
Sbjct: 179 ACQGIKPDRTVLIKAPTSA---RKQLERATRAQG-PDRIELAGVEFHTRVREAFDAIAAS 234

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            PDR  +V SA      A  +   V + V
Sbjct: 235 DPDRVRVVVSASRKSETARLVFAAVADCV 263


>gi|34499178|ref|NP_903393.1| thymidylate kinase [Chromobacterium violaceum ATCC 12472]
 gi|46576426|sp|Q7NRQ7|KTHY_CHRVO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|34105029|gb|AAQ61385.1| dTMP kinase [Chromobacterium violaceum ATCC 12472]
          Length = 212

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 7/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+ EGI+GAGK+TH+S ++ +L R   D   TREPGGTP +E  R +LL  G  
Sbjct: 5   VRRGRFITLEGIDGAGKSTHLSFIRDWLARHGVDAAFTREPGGTPLSEKIRDLLLDPGTV 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +AEA++  AAR  H+  VI PAL  G+ L+ DRF DS+YA+QG         + +L
Sbjct: 65  A-SLDAEALLAFAARQQHIAEVIEPALAAGRWLVSDRFTDSTYAFQGGGRGVPFERIRAL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++   + + PD T++ DLP ++   R+        +   D FE++    H + R  +L  
Sbjct: 124 EDWVQRGLQPDLTLLFDLPTEVAAGRMAG------TRVPDRFEQEAADFHRRVRAAYLRR 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           A   P R  ++D++     +  +I+
Sbjct: 178 AEEAPQRIAVLDASRGIADIQADIV 202


>gi|257869781|ref|ZP_05649434.1| thymidylate kinase [Enterococcus gallinarum EG2]
 gi|257803945|gb|EEV32767.1| thymidylate kinase [Enterococcus gallinarum EG2]
          Length = 215

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 111/209 (53%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SGLFI+ EG +GAGKT+ +  L  R       D+  TREPGG   AE  R ++L     E
Sbjct: 2   SGLFITIEGPDGAGKTSVLEELYPRLQLEAKRDIVKTREPGGVKIAEKIRRIILDPKNSE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  VI PAL EGKI++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDERTEALLYAAARRQHLIQVILPALNEGKIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R+Q       +  LD  + + +  H++ R  +L +A
Sbjct: 122 EFATEGTEPDFTLYLDVDSDTGLRRIQE----HRAHQLDRLDAEGLEFHQRVRHAYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R H VD+    Q V     + + E
Sbjct: 178 EENPVRIHKVDARMGLQDVVETSFSAIVE 206


>gi|184154763|ref|YP_001843103.1| thymidylate kinase [Lactobacillus fermentum IFO 3956]
 gi|227514030|ref|ZP_03944079.1| dTMP kinase [Lactobacillus fermentum ATCC 14931]
 gi|260663208|ref|ZP_05864100.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN]
 gi|238692945|sp|B2GAE1|KTHY_LACF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|183226107|dbj|BAG26623.1| thymidylate kinase [Lactobacillus fermentum IFO 3956]
 gi|227087616|gb|EEI22928.1| dTMP kinase [Lactobacillus fermentum ATCC 14931]
 gi|260552400|gb|EEX25451.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN]
          Length = 214

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 11/206 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FISFEG +GAGKT+ ++ ++  L  +  D V  TREPGG P AE  R VLL      
Sbjct: 2   SGRFISFEGPDGAGKTSVLTAIRTGLVNQLGDQVVYTREPGGNPIAEQVRAVLLDKQNGA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA+R  HV   ++PAL  GK++LCDR+LDSS AYQG     + L +D + 
Sbjct: 62  MDDWTEALLYAASRRQHVVETLKPALEAGKLILCDRYLDSSIAYQG---GGRELGIDRIW 118

Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           E+   ++  ++PD TI LDLPV+ GL R++       +  ++  + +    H + RQ +L
Sbjct: 119 ELNQYAIDGLLPDLTIFLDLPVETGLARIEK----GRAETINRLDEQTTNFHRRVRQAYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
            +A   P+R   V++      V  ++
Sbjct: 175 TLAERFPERIVKVNADQELARVIEDV 200


>gi|317153459|ref|YP_004121507.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943710|gb|ADU62761.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2]
          Length = 213

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GKTT I+ LK + + +   VH+TREPGG+      R +LL     +   
Sbjct: 1   MFITFEGIEGTGKTTQIARLKEYFESRGRAVHLTREPGGSRVGRELRQMLLHVDNADLTP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  ++ A R  HV  VIRP L  G+++LCDRF DS+  YQG         L  L E++
Sbjct: 61  ITELFLYLADRAQHVAQVIRPQLEAGRVVLCDRFADSTIVYQGFGRGLDTAILKQLNEVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182
           V  V PD TI+LD+  ++GLKR   R +L +    +   FE + +  H + R+ +L  A 
Sbjct: 121 VDGVWPDLTIVLDIDPEVGLKRATLR-NLDDGKAKEEGRFEAEHISFHRRIREGYLTWAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
              DR  + D++ +   V   +  ++
Sbjct: 180 LNRDRIRVADASATPDEVFARVKALI 205


>gi|313636002|gb|EFS01921.1| thymidylate kinase [Listeria seeligeri FSL S4-171]
          Length = 208

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  ++L + ++    D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD      L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  I   
Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDISYHEKVQAGYEKIMAM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERYMRVDATKTPEEITDVIL 200


>gi|304405877|ref|ZP_07387535.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9]
 gi|304345120|gb|EFM10956.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9]
          Length = 211

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EGAGKTT IS L   L      V +TREPGG P AE  R V+L     
Sbjct: 1   MEQGVFITIEGGEGAGKTTIISRLAAELSALGDTVTITREPGGIPIAEQIRAVILDRNHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H+   + PAL +G ++LCDRF+DSS AYQG         + ++
Sbjct: 61  GMDGRTEALLYAAARRQHLVEKVVPALEKGHVVLCDRFIDSSLAYQGHARGIGMEAVLAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++  +MP  T+ LD+  ++GL+R+Q    +RE   ++  + + +  HE+ R+ FL +
Sbjct: 121 NAFAIDGMMPKLTLYLDVRPEVGLRRIQE-AEVRE---INRIDLEAITFHEQVREGFLQL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+   DR  ++D+  S  +V    ++I+ +
Sbjct: 177 AQMYSDRIVVIDAEQSADAVFEQCMSIILK 206


>gi|313664899|ref|YP_004046770.1| dTMP kinase [Mycoplasma leachii PG50]
 gi|312949571|gb|ADR24167.1| dTMP kinase [Mycoplasma leachii PG50]
          Length = 213

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 7/216 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L         
Sbjct: 1   MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKNMDV 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   +     ++ +Q+I 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  D+      KR+Q    LR  +  +  + ++    +K  Q +L++ +N 
Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQ----LRGESSKNRLDEEENNFKQKVYQGYLELIKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217
           P+R  ++D+      V    + I+ E +   +KR S
Sbjct: 177 PERIKVIDANKDIDQVYNQAIKIILEKLKENEKRTS 212


>gi|262379436|ref|ZP_06072592.1| thymidylate kinase [Acinetobacter radioresistens SH164]
 gi|262298893|gb|EEY86806.1| thymidylate kinase [Acinetobacter radioresistens SH164]
          Length = 202

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 12/211 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  +    ++K  ++ +TREPGGT  AE  R +LLS   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTSLAEQIRALLLSVSHDEKMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121
            + E ++  AAR  H++ VI PAL  GK +LCDRF D+S+AYQ  G   +   L L +  
Sbjct: 61  DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLALLNQS 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +S    MPD T+ LD PV++G+ R       RE   LD FE++ V   EK R  +  + 
Sbjct: 121 FVS---RMPDITLWLDAPVELGMSRA------RERGALDRFEQEKVSFFEKVRAGYTRLW 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  P+R   +D+  + + V    L  + +L 
Sbjct: 172 QQHPERIKRLDATQAPEKVLEQALEQIGKLA 202


>gi|298244278|ref|ZP_06968084.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297551759|gb|EFH85624.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 217

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 116/217 (53%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ ISFEG++GAGKTT ++LL+ +LQ +      TREPGG+P     R +LL+    
Sbjct: 1   MERGVLISFEGLDGAGKTTQMNLLEAWLQSQGVSYLRTREPGGSPLGVEIRRLLLNRPDL 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA++F A R  H   VI PAL EGK+++ DR  DSS AYQG         ++ L
Sbjct: 61  HISPLAEALLFQADRAQHFAEVILPALDEGKVIVSDRCFDSSIAYQGAARGVGEQLVEDL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-----ESACLDYFERKDVMIHEKRRQ 175
             ++ Q   PD TI+LDLP +    +VQ R +L            +F+R+    H   R+
Sbjct: 121 SLLATQGHQPDLTIMLDLPPE----KVQQRTNLAVDQGGTRTEQSHFDRETETFHRTLRE 176

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            FL +AR  P R  ++D++ + + +   I   V  L+
Sbjct: 177 AFLTLARRHPQRIKVLDASRTPEVIQREIQGHVERLL 213


>gi|289435959|ref|YP_003465831.1| hypothetical protein lse_2598 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172203|emb|CBH28749.1| tmk [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 208

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 6/202 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG +G+GKTT  ++L + ++    D   TREPGG+P +E  R+++L  G +E   
Sbjct: 4   IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
           + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD      L  +   
Sbjct: 64  KTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++++ +PD T  LD+P ++GL R+    +  +   ++  +++D+  HEK +  +  I   
Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARI----AANKGREINRLDKEDISYHEKVQAGYEKIMAM 178

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P+R   VD+  + + +   IL
Sbjct: 179 FPERYMRVDATKTPEEITDVIL 200


>gi|188996346|ref|YP_001930597.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229621845|sp|B2V7X0|KTHY_SULSY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|188931413|gb|ACD66043.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 204

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 116/203 (57%), Gaps = 8/203 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIE +GKTT I+LL  +L+    +V  TREPGGT   +  R +LLS   ++F 
Sbjct: 2   GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ + R  H++++++P+L  G I+L DR++DS+ AYQ       +  +  L  +
Sbjct: 62  YIAELLLYESDRNIHIQSIVKPSLDAGYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + P+ T ++D+PV+I LKR+        S   D  E +D+  H+K R+ FL IA N
Sbjct: 122 ATDGLKPNLTFLIDIPVEISLKRL--------SESKDRIESEDIEFHKKLREGFLKIAEN 173

Query: 184 QPDRCHIVDSAHSFQSVATNILN 206
           +  R  ++D       +   I++
Sbjct: 174 EKGRFVVIDGTMDIMEIHKIIVD 196


>gi|255262414|ref|ZP_05341756.1| thymidylate kinase [Thalassiobium sp. R2A62]
 gi|255104749|gb|EET47423.1| thymidylate kinase [Thalassiobium sp. R2A62]
          Length = 208

 Score =  132 bits (331), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+FEGI+G+GK+T   +L   + R      +TREPGG+  AE  R +LLS   D 
Sbjct: 3   DHGHFITFEGIDGSGKSTQARML---VDRLGAQTLLTREPGGSEGAEEIRGLLLSGDTDR 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I PAL  G  ++ DRF DS+  YQG         +D L 
Sbjct: 60  WSAETEILLFTAARRDHLEKTIEPALAAGTTVISDRFADSTRVYQGATRGDLRATVDQLH 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD T I+D+   I LKR      L      D FE   +   E  R  FL +A
Sbjct: 120 TLMIGR-EPDLTFIIDMDPAIALKR-----GLARETGEDRFEDFGLAFQETLRHGFLALA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           R+ P+RC ++D   + + VA+ +
Sbjct: 174 RDMPNRCVVIDGNRTPEQVASEV 196


>gi|56418559|ref|YP_145877.1| thymidylate kinase [Geobacillus kaustophilus HTA426]
 gi|261417524|ref|YP_003251206.1| thymidylate kinase [Geobacillus sp. Y412MC61]
 gi|297528399|ref|YP_003669674.1| thymidylate kinase [Geobacillus sp. C56-T3]
 gi|319765181|ref|YP_004130682.1| thymidylate kinase [Geobacillus sp. Y412MC52]
 gi|73920820|sp|Q5L3W9|KTHY_GEOKA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56378401|dbj|BAD74309.1| thymidylate kinase [Geobacillus kaustophilus HTA426]
 gi|261373981|gb|ACX76724.1| thymidylate kinase [Geobacillus sp. Y412MC61]
 gi|297251651|gb|ADI25097.1| thymidylate kinase [Geobacillus sp. C56-T3]
 gi|317110047|gb|ADU92539.1| thymidylate kinase [Geobacillus sp. Y412MC52]
          Length = 214

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 111/198 (56%), Gaps = 4/198 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F SFEG EGAGKTT IS L+  L+ +  DV  TREPGG   AEA R ++L+    E 
Sbjct: 6   NGCFFSFEGPEGAGKTTMISKLESLLRERGIDVVATREPGGVRIAEAIRSIILNRDYTEM 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         +  + E
Sbjct: 66  DGRTEALLYAAARRQHLLEKIVPALEAGCVVLCDRFVDSSLAYQGFARGLGIEEVWKINE 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++   MP  TI  D+   IGL+R++ R   RE   LD    + +  HEK R+ + ++AR
Sbjct: 126 FAIDGYMPSLTIYFDIDPQIGLERIR-RNRGREVNRLDL---ETLSFHEKVREGYRELAR 181

Query: 183 NQPDRCHIVDSAHSFQSV 200
              DR  ++D+      V
Sbjct: 182 RFADRIVVIDANRPLDDV 199


>gi|126652958|ref|ZP_01725100.1| thymidylate kinase [Bacillus sp. B14905]
 gi|126590288|gb|EAZ84410.1| thymidylate kinase [Bacillus sp. B14905]
          Length = 215

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 123/216 (56%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S LFI+FEG EGAGKTT I  +   L   N DV  TREPGG   AE  R ++L+    
Sbjct: 7   MKSNLFITFEGPEGAGKTTVIQKIAERLAEINIDVLATREPGGIEIAEKIRTIILNPAHT 66

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
                 EA+++AAAR  H    ++PAL  GK+++CDRF+DSS AYQG    ++ + +D  
Sbjct: 67  AMDERTEALLYAAARSQHYFEKVQPALDAGKLVICDRFIDSSLAYQG---YARGIGIDEV 123

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+ E ++ + +PD TI+ D+  ++GL R+    + RE   LD    + +  H+K  + +
Sbjct: 124 LSINEFAIGKKLPDMTILFDIAPEVGLARIYATGN-REVNRLDV---ESLPFHQKVHEGY 179

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           L +    P+R  IV++     SV  ++ +++ + +Q
Sbjct: 180 LLLVERYPERIRIVNADQDIDSVVEDVWSLLLDAIQ 215


>gi|296111513|ref|YP_003621895.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154]
 gi|295833045|gb|ADG40926.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154]
          Length = 214

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 13/220 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ ++ L+  F Q    D+  TREPGG P +EA R +L     
Sbjct: 1   MTKPLFITFEGPEGAGKTSVLNQLVAEFQQTLGDDLISTREPGGNPISEAIRAILQPEED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+   + PAL  GK+++ DR++DSS AYQG     + L +D 
Sbjct: 61  NGMDDRTEALLYTAARRQHLVETVLPALKAGKVVISDRYVDSSLAYQG---GGRGLGVDH 117

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175
           + +I   ++  ++PD TI  DLP ++GL RV+ NR        +D  +++ +  H+K R+
Sbjct: 118 IWQINQFAIDGLLPDLTIYFDLPSELGLARVKANR-----QGKIDRLDKESLAFHQKVRK 172

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +L++     DR  IVD+  S  +V      ++ E ++ R
Sbjct: 173 TYLELQVKFSDRIKIVDATQSLDNVVDATRQLILERMKYR 212


>gi|167038531|ref|YP_001666109.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167038727|ref|YP_001661712.1| dTMP kinase [Thermoanaerobacter sp. X514]
 gi|256751401|ref|ZP_05492280.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913688|ref|ZP_07131005.1| thymidylate kinase [Thermoanaerobacter sp. X561]
 gi|307723297|ref|YP_003903048.1| thymidylate kinase [Thermoanaerobacter sp. X513]
 gi|320116927|ref|YP_004187086.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|238687559|sp|B0K119|KTHY_THEPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687643|sp|B0K7K7|KTHY_THEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166852967|gb|ABY91376.1| dTMP kinase [Thermoanaerobacter sp. X514]
 gi|166857365|gb|ABY95773.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|256749783|gb|EEU62808.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890373|gb|EFK85518.1| thymidylate kinase [Thermoanaerobacter sp. X561]
 gi|307580358|gb|ADN53757.1| thymidylate kinase [Thermoanaerobacter sp. X513]
 gi|319930018|gb|ADV80703.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 203

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 8/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  L+ +L ++ Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   KGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PA+ EGKI+L DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKVVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R +       D  ER+    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLERESWDFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R   +D       V  +I+++V
Sbjct: 174 EFPKRFVFIDGMQELMKVHKDIIDVV 199


>gi|320159579|ref|YP_004172803.1| thymidylate kinase [Anaerolinea thermophila UNI-1]
 gi|319993432|dbj|BAJ62203.1| thymidylate kinase [Anaerolinea thermophila UNI-1]
          Length = 205

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 113/200 (56%), Gaps = 6/200 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG+GKTT I L   FL+ + YDV  TREPGGT  ++  R VL++        
Sbjct: 1   MFITFEGPEGSGKTTQIRLFAEFLRARGYDVLTTREPGGTEISDQIRAVLVNLRNTAMHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F AAR   VE VIRPAL  G ++L DR+ DS+ AYQG         L  L + +
Sbjct: 61  RTEILLFQAARAQLVEQVIRPALSRGTLVLSDRYADSTLAYQGYGHGYPLEELRRLIDFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T +LD+    GL+R Q      E   LD +   D+  H++ R  +L++AR +
Sbjct: 121 TGGLIPDLTFLLDVNPAQGLERKQRE---GEWNRLDAY---DLGFHQRVRAGYLEMARAE 174

Query: 185 PDRCHIVDSAHSFQSVATNI 204
           P R  +VD+  S + + ++I
Sbjct: 175 PHRWVVVDATQSIEVIQSDI 194


>gi|148259980|ref|YP_001234107.1| dTMP kinase [Acidiphilium cryptum JF-5]
 gi|326403065|ref|YP_004283146.1| thymidylate kinase [Acidiphilium multivorum AIU301]
 gi|146401661|gb|ABQ30188.1| thymidylate kinase [Acidiphilium cryptum JF-5]
 gi|325049926|dbj|BAJ80264.1| thymidylate kinase [Acidiphilium multivorum AIU301]
          Length = 210

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 8/205 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EG EGAGK+T I+ L   L+   ++V  TREPGGTP AEA R ++L      F 
Sbjct: 5   GVFITLEGGEGAGKSTQIARLAARLRAAGHEVLTTREPGGTPGAEAIRALMLDP-ARHFA 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A+ ++  AAR DHV  +IRPAL  G ++LCDRF DS+ AYQG         + +L   
Sbjct: 64  PLADTLLVFAARADHVAAIIRPALEHGAVVLCDRFTDSTMAYQGHGLGVDRAAIATLG-- 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++    PD T+ILDLP  I   R+ +R         D +E+ D     +    F  IA  
Sbjct: 122 AMIGATPDLTLILDLPDAIARARLAHR-----GGAADRYEQFDTGFAIRVADGFRAIAAA 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +PDRC +VD+A   + V   +  ++
Sbjct: 177 EPDRCVLVDAAGGIEDVTETLAGLI 201


>gi|325982933|ref|YP_004295335.1| thymidylate kinase [Nitrosomonas sp. AL212]
 gi|325532452|gb|ADZ27173.1| thymidylate kinase [Nitrosomonas sp. AL212]
          Length = 208

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 119/215 (55%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G F++ EGI+GAGK+T +  +   LQR      VTREPGGT   E  R +LL   + 
Sbjct: 1   MKQGKFLTLEGIDGAGKSTQLVWIAELLQRAGLSAVVTREPGGTLLGEQLRALLLDKFI- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GER--DSSQHLFL 117
               E EA++  AAR +H++ VI PAL +G+ ++ DRF D+S+AYQ G R  DS++ + L
Sbjct: 60  SMHPETEALLMFAARREHLDKVIFPALAQGQWVISDRFTDASFAYQSGGRGLDSAKLVIL 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +   + ++Q   PD T+  D+P D+G +RV           +D FE++      + R  +
Sbjct: 120 EQWVQGALQ---PDLTLYFDVPADVGQQRVSR------GGVVDRFEQEQADFFLRVRAAY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD A+  PDR  I+DS  S   V   +  I+  L+
Sbjct: 171 LDRAQQFPDRIKIIDSNRSLPEVKVAVEQILQPLL 205


>gi|89898307|ref|YP_515417.1| thymidylate kinase [Chlamydophila felis Fe/C-56]
 gi|123483364|sp|Q254L6|KTHY_CHLFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|89331679|dbj|BAE81272.1| thymidylate kinase [Chlamydophila felis Fe/C-56]
          Length = 207

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +   V  TREPGG+P  E  R+ +L+  +     
Sbjct: 1   MFIVIEGCEGSGKSSLTELLKNRLITEGKSVIATREPGGSPLGEQVRNWILNPSLPGISP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
             E  +F A+R  H+   I PAL  GKI++CDRF DS+  YQG  +     ++ +L    
Sbjct: 61  YTELFLFLASRAQHITEKIIPALESGKIVICDRFHDSTIVYQGIAEGLGKEYVTNLCHHV 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  ++ +PD T +LD+PVD G+KR Q + S      LD FE K ++ H K R+ FL +A 
Sbjct: 121 VGEKKFLPDLTCLLDIPVDTGIKRKQQQKS------LDKFEDKPLVYHNKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P+   I+D     ++    ++    EL
Sbjct: 175 ANPENYLILDGRQPLEASLNKVMTAYTEL 203


>gi|161831009|ref|YP_001596429.1| thymidylate kinase [Coxiella burnetii RSA 331]
 gi|164686003|ref|ZP_01946518.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177']
 gi|165919105|ref|ZP_02219191.1| thymidylate kinase [Coxiella burnetii RSA 334]
 gi|161762876|gb|ABX78518.1| thymidylate kinase [Coxiella burnetii RSA 331]
 gi|164601531|gb|EAX32890.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177']
 gi|165917174|gb|EDR35778.1| thymidylate kinase [Coxiella burnetii RSA 334]
          Length = 223

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 8/220 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEGIEG GKTT ++ ++  L        VTREPGGTP AEA R VLLS   +   
Sbjct: 6   GRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMMC 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L   
Sbjct: 66  PDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGW 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +A  
Sbjct: 126 VLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQ 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 180 EPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217


>gi|154706615|ref|YP_001424915.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111]
 gi|154355901|gb|ABS77363.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111]
          Length = 223

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 8/220 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEGIEG GKTT ++ ++  L        VTREPGGTP AEA R VLLS   +   
Sbjct: 6   GRFISFEGIEGVGKTTALNWVREQLDATRIPYVVTREPGGTPIAEAIRDVLLSHSDEMMC 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L   
Sbjct: 66  PDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGW 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +A  
Sbjct: 126 VLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQ 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 180 EPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217


>gi|309390261|gb|ADO78141.1| thymidylate kinase [Halanaerobium praevalens DSM 2228]
          Length = 208

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 120/208 (57%), Gaps = 5/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGIEG+GKTT I+ L  +L++  +DV ++REPGGT   +  R +LL    D
Sbjct: 1   MAEGFFITFEGIEGSGKTTQINRLADYLRKNEHDVLISREPGGTELGQKIRKILLDPHFD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E +++AA R  HV+  I+PAL  GKI++ DRF+DS+ AYQ       +  +  +
Sbjct: 61  TMDYKTEILLYAADRAQHVKEKIKPALKAGKIVISDRFVDSNLAYQAAGRGLDYEQVYQI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +    PD T ILD+ +  GL+R + + S  ++   D  ER+    H++ R+ +L++
Sbjct: 121 NNWVIGSTWPDLTFILDIDIKKGLERAR-KLSFDQAG--DRLEREVDDFHQRVREAYLEM 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A    +R  ++++A S   +  +I NI+
Sbjct: 178 A--VAERFCLINAARSIVEIEKDIKNII 203


>gi|42560606|ref|NP_975057.1| thymidylate kinase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|59798304|sp|Q6MUI5|KTHY_MYCMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|42492102|emb|CAE76699.1| THYMIDYLATE KINASE [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320609|gb|ADK69252.1| dTMP kinase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 213

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 7/216 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTTLLKVKEELERLNYQVLITREPGGEAIAEQIRQIILDNKNRDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   +     ++ +Q+I 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  D+      KR+Q    +R     +  + +     +K  Q +L++ +N 
Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQ----IRGENSKNRLDEEKSDFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217
           P R  ++D+      V    + I+ E +   +KR S
Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKENEKRTS 212


>gi|254468768|ref|ZP_05082174.1| thymidylate kinase [beta proteobacterium KB13]
 gi|207087578|gb|EDZ64861.1| thymidylate kinase [beta proteobacterium KB13]
          Length = 201

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 10/208 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EGI+GAGK+TH+  ++ +L +KN    +TREPGGT   E  R +LL    D+    
Sbjct: 4   FITVEGIDGAGKSTHLEFIQSYLNKKNIQNKLTREPGGTEIGEKLRQLLLH---DDMDVG 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR +H+  VI+PAL     ++CDRF D+SYAYQ         F+ SL+E+  
Sbjct: 61  TETMMMFAARHEHLITVIQPALQSNISIICDRFTDASYAYQQGGKGIDKSFVKSLEELVH 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T + DL  D    R+ N  +      LD FE++        R+++L++A+   
Sbjct: 121 PNLTPDLTFLFDLDPDTAHSRISNERN------LDKFEKQSSTFFNGVRKVYLELAKAHS 174

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R H++DS+ +   +   I   + ELV+
Sbjct: 175 -RFHVIDSSQTIDQIQQVISKKLDELVK 201


>gi|311896975|dbj|BAJ29383.1| putative thymidylate kinase [Kitasatospora setae KM-6054]
          Length = 1055

 Score =  131 bits (330), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 8/201 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG +GAGK+T    L  +++ K ++V +TREPGG+P  +  R ++L  G     
Sbjct: 516 GYFIALEGGDGAGKSTQAQALAEWIRAKGHEVVLTREPGGSPIGQRLRALVLDVGNTGLS 575

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R +HVENVIRPAL  G ++L DR++DSS AYQG         +  +   
Sbjct: 576 HRAEALIYAADRAEHVENVIRPALERGAVVLTDRYMDSSIAYQGAGRDLAATEVARISRW 635

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD T++LD  VD    R  +R+    +  LD  E +    H++ R  FL +A  
Sbjct: 636 ATGGLVPDLTVVLD--VDPTAAR--DRF----TEALDRLESEPTEFHQRVRSGFLALAAA 687

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
            P R  +VD   S  +V T I
Sbjct: 688 DPARYLVVDGTQSAAAVTTAI 708


>gi|293605096|ref|ZP_06687488.1| dTMP kinase [Achromobacter piechaudii ATCC 43553]
 gi|292816499|gb|EFF75588.1| dTMP kinase [Achromobacter piechaudii ATCC 43553]
          Length = 207

 Score =  131 bits (330), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 113/205 (55%), Gaps = 14/205 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+ EG++GAGK+TH   +  FL+    +V  TREPGGTP  E  R ++L+   D+
Sbjct: 3   SRGRFITLEGVDGAGKSTHTDWIADFLRSNGREVVSTREPGGTPLGEKLRALVLT---DQ 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--S 119
            G + E ++  AAR +HV  VI PAL  G  ++CDR+ D++YAYQG     + L  +  +
Sbjct: 60  MGLDTETLLMFAARCEHVRQVIEPALARGAWVVCDRYTDATYAYQG---GGRELGAERVA 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E  +    PD T + D+P+++   R+ +    RE    D FER+     E+ R  +  
Sbjct: 117 VLERWMHAGQPDRTWLFDVPLEVARARLAD---AREP---DRFEREGAAFFERTRTAYHA 170

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
            A+  P R HI+DS  S   + T +
Sbjct: 171 RAKADPGRIHIIDSTQSIAQIRTEL 195


>gi|315037614|ref|YP_004031182.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112]
 gi|325956093|ref|YP_004286703.1| thymidylate kinase [Lactobacillus acidophilus 30SC]
 gi|312275747|gb|ADQ58387.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112]
 gi|325332658|gb|ADZ06566.1| thymidylate kinase [Lactobacillus acidophilus 30SC]
          Length = 212

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCG 58
           +G F+SFEG +GAGK+T   +LK  L +    +     VTREPGG+  AE  R ++L   
Sbjct: 2   TGYFVSFEGPDGAGKST---VLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPA 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+  A+ EA+++AAAR  HVE +I+PAL  GKI+  DRF+DSS AYQGE        + 
Sbjct: 59  NDKMDAKTEALLYAAARSQHVEEIIKPALEAGKIVFSDRFVDSSLAYQGEGRDLGIKEVK 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + +  ++ PD T  +D+  +IGL R+Q     +E    D  E++++  H+K  Q FL
Sbjct: 119 QINDFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHKKVYQGFL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +    P+R   +D       V   ++  + +
Sbjct: 175 KVRAMYPERFVTIDGTQPIDQVVDQVITTLKQ 206


>gi|253680847|ref|ZP_04861650.1| dTMP kinase [Clostridium botulinum D str. 1873]
 gi|253562696|gb|EES92142.1| dTMP kinase [Clostridium botulinum D str. 1873]
          Length = 210

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EG+GKTT + +++ +L+  N D   TREPGG   +E  R ++L     
Sbjct: 1   MKKGVFITLEGPEGSGKTTIVKMIEGYLKENNIDYISTREPGGINISEQIREIILDRKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
           E  A  EA+++ A+R  H+   + PAL  GKI++CDRF+DSS AYQG    ++ + +D  
Sbjct: 61  EMDARTEALLYVASRRQHLSERVIPALKSGKIVICDRFIDSSLAYQG---YARGIGIDEV 117

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+ E ++   MP+ T+ LD+  +IGLKR+      RE   LD  E+ D   H+K R+ +
Sbjct: 118 MSINEFAIDGYMPNLTLYLDIDPEIGLKRISEN-DKREVNRLD-LEKLD--FHKKVREGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILN 206
             + +  P+R   +++      V  ++ N
Sbjct: 174 FKVLKKFPNRIKKINANQPIDKVFEDVKN 202


>gi|326202926|ref|ZP_08192793.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
 gi|325987003|gb|EGD47832.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
          Length = 206

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT I L++ FL+    DV ++REPGGT  +E  R+++L  G  
Sbjct: 1   MCKGLFITVEGTDGSGKTTQIKLMEEFLKAAGNDVVLSREPGGTEISETIRNLILDPGNK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++AAAR  HV  VIRP+L  GK ++CDRF+DSSYAYQG         +  +
Sbjct: 61  DISPLTEMLLYAAARAQHVFQVIRPSLESGKCVICDRFVDSSYAYQGCGRGVDLKTVADV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V  V+PD T  L++   + ++R        +S   D  E++ +  H +  + +  +
Sbjct: 121 NRAAVDGVVPDITFFLNIDPRLAIER------RIKSTGADRIEQEKMDFHMRVYEGYRKM 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   PDR   +D++ S + ++  I   + E++
Sbjct: 175 ALLYPDRIKSIDASKSIEEISLQIKTYLKEIL 206


>gi|309378939|emb|CBX22392.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 208

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 119/199 (59%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPAT-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P ++ + R+     +RE    D FE+++    ++ RQ++L  A  QP
Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ---MREK---DRFEQEEAGFFKRVRQVYLQRAGRQP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D + S ++V   I
Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196


>gi|226941613|ref|YP_002796687.1| thymidylate kinase [Laribacter hongkongensis HLHK9]
 gi|226716540|gb|ACO75678.1| KthY [Laribacter hongkongensis HLHK9]
          Length = 214

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 7/197 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EGI+GAGK+TH+  ++ +L  +  ++ VTREPGGTP  E+ R +LL     +  
Sbjct: 8   GLFLTLEGIDGAGKSTHVGFVRDYLTARGINLVVTREPGGTPVGESLRSLLLDV-QSQVS 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VIRPAL  G  +L DRF D++YA+QG         + +L+  
Sbjct: 67  LDTETLLMFAARQAHLDAVIRPALARGDWVLSDRFTDATYAFQGGGRGVPFARIATLENW 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             Q + PDCT + D+P+     R+Q    +R+   LD FE++    H + R  +L  A +
Sbjct: 127 VQQGLQPDCTFLFDVPLATAQARMQG---VRQ---LDRFEQEASDFHARVRDAYLRRAAD 180

Query: 184 QPDRCHIVDSAHSFQSV 200
           +P R  ++D+  S  ++
Sbjct: 181 EPQRFCLLDARQSIGAL 197


>gi|308388855|gb|ADO31175.1| putative thymidylate kinase [Neisseria meningitidis alpha710]
 gi|325129800|gb|EGC52608.1| thymidylate kinase [Neisseria meningitidis OX99.30304]
 gi|325135738|gb|EGC58350.1| thymidylate kinase [Neisseria meningitidis M0579]
 gi|325197890|gb|ADY93346.1| thymidylate kinase [Neisseria meningitidis G2136]
 gi|325202534|gb|ADY97988.1| thymidylate kinase [Neisseria meningitidis M01-240149]
 gi|325207716|gb|ADZ03168.1| thymidylate kinase [Neisseria meningitidis NZ-05/33]
          Length = 206

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+       +S   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIG------QSREKDRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  I+DS  S   V  NI  ++
Sbjct: 178 ERYAIIDSNRSLDEVRNNIEKVL 200


>gi|258542239|ref|YP_003187672.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633317|dbj|BAH99292.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636376|dbj|BAI02345.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639429|dbj|BAI05391.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642485|dbj|BAI08440.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645540|dbj|BAI11488.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648593|dbj|BAI14534.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651646|dbj|BAI17580.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654637|dbj|BAI20564.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-12]
          Length = 214

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 113/209 (54%), Gaps = 9/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EG GK+T + LLK  L+ +   V  TREPGG+  AE  R +LL  G +
Sbjct: 1   MACGMFITLEGAEGVGKSTQLRLLKENLEAQGQKVLTTREPGGSAGAEDLRQLLL-FGKN 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119
              A AE +   AAR DHV+ VI PAL  G+I+LCDRF DS+ AYQG  R +     L  
Sbjct: 60  PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTMAYQGYGRANGDPAILSL 119

Query: 120 LQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++ +  Q  + PD T +L  P  I  +R+  R      A  D +E+ D   H +    F 
Sbjct: 120 IETLQKQLGLQPDVTFLLQAPRAISRQRLAAR-----GAPTDRYEQADEDFHARLADGFA 174

Query: 179 DIARNQPDRCHIVD-SAHSFQSVATNILN 206
            IA+ +P R  +VD S +S + V   IL 
Sbjct: 175 HIAKAEPQRVVVVDTSVYSAEQVNAQILK 203


>gi|46576522|sp|Q83E35|KTHY_COXBU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 227

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 8/220 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEGIEG GKTT ++ ++  L        VTREPGGTP AEA R VLLS   +   
Sbjct: 10  GRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMMC 69

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L   
Sbjct: 70  PDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGW 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +A  
Sbjct: 130 VLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQ 183

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 184 EPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 221


>gi|255327688|ref|ZP_05368754.1| dTMP kinase [Rothia mucilaginosa ATCC 25296]
 gi|255295362|gb|EET74713.1| dTMP kinase [Rothia mucilaginosa ATCC 25296]
          Length = 238

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI  EG +GAGKTT ++LL   L+ + Y V  TREPGGT   E  R ++L  G     
Sbjct: 22  GLFIVVEGGDGAGKTTQLALLDEALRGRGYRVITTREPGGTEIGEKLRALVLEAGQGTID 81

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
              EA++FAA+R  H   +IRPAL EG I+L DR++DSS AYQG  RD      +D L  
Sbjct: 82  DRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGVETIVD-LSR 140

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++L +P+    +R+  R        +D  E +      +    F  IAR
Sbjct: 141 WATANLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGTAFKARIHGAFEQIAR 194

Query: 183 NQPDRCH-IVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
              +  H I+D   + + V   +L ++  L+  R    + K+D
Sbjct: 195 EDANGSHRIIDGVGTIEQVHARVLEVIEPLLALRELVRTGKED 237


>gi|319779570|ref|YP_004130483.1| Thymidylate kinase [Taylorella equigenitalis MCE9]
 gi|317109594|gb|ADU92340.1| Thymidylate kinase [Taylorella equigenitalis MCE9]
          Length = 204

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 11/198 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EGI+GAGK++HI  +  F +    +V VTREPGG   +EA R +LL+  ++   
Sbjct: 3   GYFITLEGIDGAGKSSHIEYIVDFFESLGREVVVTREPGGNALSEALRGILLTQPMNSL- 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQE 122
              E ++  A+R + V  +I PAL EGKI++ DRF DS+ AYQG  RD S  + ++ L+ 
Sbjct: 62  --TEVLLMFASRSESVYGIILPALREGKIVISDRFTDSTLAYQGGGRDFSIDV-INDLKN 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I   ++ PD T++ D+P+++   R+ N  S+      D FE  D     + R  +L +A 
Sbjct: 119 IVHPDLTPDLTLLFDVPLEVARDRLSNGRSV------DKFEVLDEDFFNRVRNQYLSMAN 172

Query: 183 NQPDRCHIVDSAHSFQSV 200
            +PDR  I+DS+HS   V
Sbjct: 173 YEPDRIKIIDSSHSVTVV 190


>gi|84516820|ref|ZP_01004178.1| thymidylate kinase [Loktanella vestfoldensis SKA53]
 gi|84509288|gb|EAQ05747.1| thymidylate kinase [Loktanella vestfoldensis SKA53]
          Length = 202

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 6/204 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+FEGI+G+GK+T    L ++L  + +DV +TREPGG+  AE  R +LL+   D
Sbjct: 1   MTRPRFITFEGIDGSGKSTQARRLAQWLGDQGHDVILTREPGGSQGAEEIRQLLLTGDTD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  I PAL  GK ++ DRF DS+  YQG         +D+L
Sbjct: 61  RWSAETEILLFTAARRDHLEKTILPALAAGKTVVSDRFADSTRVYQGATRGDLRAKVDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             + +    PD T ++D+     L+R   R S       D FE   +   E  R  FL +
Sbjct: 121 HALMIGR-EPDLTFVIDMDPATALERGLARRS-----GEDRFEDFGLPFQETLRHGFLAL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           AR +  RC ++D   +   +A+++
Sbjct: 175 ARAEAQRCVLIDGNRTPDQIASDV 198


>gi|152980260|ref|YP_001353676.1| thymidylate kinase [Janthinobacterium sp. Marseille]
 gi|166221747|sp|A6SZH9|KTHY_JANMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|151280337|gb|ABR88747.1| thymidylate kinase (dTMP kinase) [Janthinobacterium sp. Marseille]
          Length = 204

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEGI+GAGK+TH+S +   L  +   V VTREPGGT   E  R +LL    +
Sbjct: 1   MTTGKFITFEGIDGAGKSTHLSFVAELLCERKKTVVVTREPGGTSLGEELREILLH---E 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         L++L
Sbjct: 58  KMHLETEALLMFAARREHIAQVIAPALERGDWVISDRFTDATFAYQGGGRKLDRAKLNAL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + P  T++ D+P+D+       R  L  +  LD FE++        R  +L  
Sbjct: 118 EQWVHPHLQPHLTLLFDVPLDVA------RARLDATRTLDKFEQEKAEFFAATRAEYLRR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R H++DS  S  ++   +  IV
Sbjct: 172 AAEFPQRFHVIDSTRSIAAIQEQLRAIV 199


>gi|260551489|ref|ZP_05825673.1| thymidylate kinase [Acinetobacter sp. RUH2624]
 gi|260405483|gb|EEW98976.1| thymidylate kinase [Acinetobacter sp. RUH2624]
          Length = 199

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 12/207 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALASNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           +++P+R   +D+  S + V    L  +
Sbjct: 172 KSEPERIKRLDATQSPEQVFEQALQYL 198


>gi|327182908|gb|AEA31355.1| thymidylate kinase [Lactobacillus amylovorus GRL 1118]
          Length = 212

 Score =  131 bits (329), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 11/207 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCG 58
           +G F+SFEG +GAGK+T   +LK  L +    +     VTREPGG+  AE  R ++L   
Sbjct: 2   TGYFVSFEGPDGAGKST---VLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPA 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+  A+ EA+++AAAR  HVE +I+PAL  GKI+  DRF+DSS AYQGE        + 
Sbjct: 59  NDKMDAKTEALLYAAARSQHVEEIIKPALTAGKIVFSDRFVDSSLAYQGEGRDLGIKEVK 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + +  ++ PD T  +D+  +IGL R+Q     +E    D  E++++  H K  Q FL
Sbjct: 119 QINDFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHTKVYQGFL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNIL 205
            +    P+R   +D       V   ++
Sbjct: 175 KVRAMYPERFVTIDGTQPIDQVVDQVI 201


>gi|262047567|ref|ZP_06020522.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US]
 gi|293379956|ref|ZP_06626057.1| thymidylate kinase [Lactobacillus crispatus 214-1]
 gi|312977918|ref|ZP_07789664.1| dTMP kinase [Lactobacillus crispatus CTV-05]
 gi|260572143|gb|EEX28708.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US]
 gi|290923469|gb|EFE00371.1| thymidylate kinase [Lactobacillus crispatus 214-1]
 gi|310895225|gb|EFQ44293.1| dTMP kinase [Lactobacillus crispatus CTV-05]
          Length = 212

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 123/214 (57%), Gaps = 17/214 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59
           G F+SFEG +GAGK+T   +LK  L +   ++     VTREPGG+  AE  R ++L    
Sbjct: 3   GYFVSFEGPDGAGKST---VLKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPAN 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG   + + L +  
Sbjct: 60  DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 116

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +++I   +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    
Sbjct: 117 VKQINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           FL +    P+R   VD+      V   ++ I+ +
Sbjct: 173 FLKVKEMYPERFVTVDATQPIDQVVAQVIAILKQ 206


>gi|282889968|ref|ZP_06298503.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500161|gb|EFB42445.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 222

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 12/198 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI+FEG EGAGKTT I  ++  L++  YDV  TREPGG+      R  LL          
Sbjct: 12  FITFEGGEGAGKTTLIQQVEADLKQLGYDVVSTREPGGSSLGNTIRQWLLQQNTKTSISI 71

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F AAR  H+E +I P+L +GKI+LCDRF DS+ AYQG    ++ L L+++Q + 
Sbjct: 72  KAELLLFLAARAQHIEELILPSLTKGKIVLCDRFNDSTIAYQG---VARGLGLEAVQNLC 128

Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQIFL 178
                 V+PD TI LD+   +GL R   R++ +E A    +D  E + +  HE  RQ F 
Sbjct: 129 KFVCGNVVPDLTIYLDIDPHVGLTR--TRHAAKEDAPMGSIDRIESEKLEFHEHVRQGFF 186

Query: 179 DIARNQPDRCHIVDSAHS 196
            +    P R H++D++ S
Sbjct: 187 KLIHQNPSRYHVIDASMS 204


>gi|227877632|ref|ZP_03995685.1| thymidylate kinase [Lactobacillus crispatus JV-V01]
 gi|256849085|ref|ZP_05554518.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US]
 gi|227862780|gb|EEJ70246.1| thymidylate kinase [Lactobacillus crispatus JV-V01]
 gi|256713861|gb|EEU28849.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US]
          Length = 216

 Score =  131 bits (329), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 17/212 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59
           G F+SFEG +GAGK+T   +LK  L +   ++     VTREPGG+  AE  R ++L    
Sbjct: 7   GYFVSFEGPDGAGKST---VLKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPAN 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG   + + L +  
Sbjct: 64  DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 120

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +++I   +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    
Sbjct: 121 VKQINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 176

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           FL +    P+R   VD+      V   ++ I+
Sbjct: 177 FLKVKEMYPERFVTVDATQPIDQVVAQVIAIL 208


>gi|210630412|ref|ZP_03296447.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279]
 gi|210160494|gb|EEA91465.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279]
          Length = 225

 Score =  130 bits (328), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 6/206 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EGI+G GK+T  +L++  L    YDV   REPGG   +E  R VLL    D
Sbjct: 1   MTKGHFITVEGIDGVGKSTQAALMEVLLDSAGYDVLRLREPGGVSISEQIRAVLLDPAND 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E G   E +++ AAR   V  VIRPAL  GK ++CDRF DS+ AYQ   D      +   
Sbjct: 61  EMGDMCELLLYEAARAQLVHQVIRPALTAGKTVICDRFYDSTTAYQSFADGLDRDMVFQA 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E++V    PD T++ DLPV+   +R  +R      +  D  E K     ++  + F  +
Sbjct: 121 NELAVDGCRPDLTLVFDLPVEDAHRRRSDR------SAEDRLELKGRDFQQRVSEGFRAV 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
           A ++PDR  +VD+  S   V + +++
Sbjct: 175 AADEPDRVRLVDAGGSIAEVFSIVVD 200


>gi|294787169|ref|ZP_06752422.1| dTMP kinase [Parascardovia denticolens F0305]
 gi|315227293|ref|ZP_07869080.1| thymidylate kinase [Parascardovia denticolens DSM 10105]
 gi|294484525|gb|EFG32160.1| dTMP kinase [Parascardovia denticolens F0305]
 gi|315119743|gb|EFT82876.1| thymidylate kinase [Parascardovia denticolens DSM 10105]
          Length = 226

 Score =  130 bits (328), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 10/218 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEG++G GK+T +  L+ +L  +   V VTREPGGTP  E  R +LL  G DE  
Sbjct: 3   GFFISFEGVDGVGKSTQVKRLEAYLLEQGRSVLVTREPGGTPLGERIRQILLH-GEDE-A 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AA+R  HV   IRPAL  G +++ DR++DSS AYQ          +  L   
Sbjct: 61  PRTEALLYAASRAQHVAQKIRPALDSGALVISDRYIDSSLAYQAGGRELTLADVRRLNSW 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ PD T +LD+      +R+Q      ES+   +F+R         RQ FL +A  
Sbjct: 121 ATGDLWPDRTYLLDMSFQQSRQRLQGEPDRLESSGGAFFDRA--------RQAFLALAEG 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           +PDR  ++D++     V   I      L+    SPL+S
Sbjct: 173 EPDRFRVIDASQPIDQVWQAIKTDADGLLAGLPSPLAS 210


>gi|300362307|ref|ZP_07058483.1| thymidylate kinase [Lactobacillus gasseri JV-V03]
 gi|300353298|gb|EFJ69170.1| thymidylate kinase [Lactobacillus gasseri JV-V03]
          Length = 213

 Score =  130 bits (328), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKTT I+ L+K+  +       +TREPGG+  +E  R ++L     E 
Sbjct: 3   GYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG     + L ++++++
Sbjct: 63  DDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQG---VGRDLGVEAVKQ 119

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+      + PD TI LDL    GL R++   + +E    D  E++ +  H+K    ++D
Sbjct: 120 INDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHKKVYAGYID 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +  PDR   VD+    + VA N + I+
Sbjct: 176 LLKRYPDRIKKVDANLPIEEVAANSVKII 204


>gi|119478164|ref|ZP_01618220.1| thymidylate kinase [marine gamma proteobacterium HTCC2143]
 gi|119448673|gb|EAW29917.1| thymidylate kinase [marine gamma proteobacterium HTCC2143]
          Length = 211

 Score =  130 bits (328), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EG GK+T+I+ +   L   N    VTREPGGTP AE  R +LLS   +    
Sbjct: 1   MFITIEGGEGVGKSTNIAYIADQLSDANITCIVTREPGGTPLAEDIRQLLLSDRDEAIAD 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++  A+R  H+  VI PAL  G  ++CDRF D++YAYQG         + +L++  
Sbjct: 61  NTELLLMFASRAQHIAGVIEPALARGDWVICDRFTDATYAYQGGGRGLSEAKIANLEQWV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +++ PD TI+ D P+ +G+ R   R        LD  ER+     E  R  +L +A   
Sbjct: 121 QEDLRPDITILFDAPITVGMSRAGQRGE------LDRIERERAAFFENVRNCYLMLAERH 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
            DR   VD++ +   V  ++  I+ E+
Sbjct: 175 SDRFRTVDASETLGRVQASLQPIIAEM 201


>gi|299769149|ref|YP_003731175.1| thymidylate kinase [Acinetobacter sp. DR1]
 gi|298699237|gb|ADI89802.1| thymidylate kinase [Acinetobacter sp. DR1]
          Length = 199

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    + + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---TGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KAEPERIKRIDATQS 186


>gi|262278188|ref|ZP_06055973.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202]
 gi|262258539|gb|EEY77272.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202]
          Length = 199

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KAEPERIKRLDATRS 186


>gi|227496773|ref|ZP_03927046.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434]
 gi|226833726|gb|EEH66109.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434]
          Length = 265

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 8/215 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF+SFEG +G GKTT I  L   L+    D  VTREPGGT      R +LL  G  E
Sbjct: 17  GPGLFLSFEGGDGVGKTTQIHRLSGLLEAAGVDCLVTREPGGTELGAEIRRLLLHGG--E 74

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A AEA+++AA R  HV+  +RPAL  G +++ DR+LDSS AYQG   S     +  L 
Sbjct: 75  VSARAEALLYAADRAHHVQTRVRPALARGGVVITDRYLDSSVAYQGAARSLGSQEVRDLS 134

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + Q ++PD TI+LD    I            E A LD  ER+    H   R+ FL +A
Sbjct: 135 LWATQGLLPDLTILLDAEPGI------AARRAGERAALDRLEREPSSFHVALREEFLALA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +P R  ++D+    + VA  +   V  L++ R 
Sbjct: 189 AAEPGRFVVIDADRGVEEVAEQVTAAVVRLIRSRT 223


>gi|288554635|ref|YP_003426570.1| thymidylate kinase [Bacillus pseudofirmus OF4]
 gi|288545795|gb|ADC49678.1| thymidylate kinase [Bacillus pseudofirmus OF4]
          Length = 213

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 6/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+ EG EGAGKTT +  +++ L+ +N  V  TREPGG   AE  R V+L     
Sbjct: 1   MKTGLFITVEGGEGAGKTTIVDKIEQDLRARNISVVRTREPGGIRIAERIREVILDVDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  EA+++AAAR  H+   + PAL EG +++CDRF+DSS AYQG         + ++
Sbjct: 61  EMDARTEALLYAAARRQHLIEKVLPALEEGNVVICDRFIDSSLAYQGHARGIGFNDVLAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM-IHEKRRQIFLD 179
            E +++   PD T+  ++  ++GL R++ R   RE   LD    ++V   HEK ++ +  
Sbjct: 121 NEFAIEGNYPDLTLFFNIEPEVGLARIK-RSGTREVNRLD----QEVFDFHEKVKEGYEK 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    PDR  ++++     +V ++ + ++ + ++K
Sbjct: 176 VIAQYPDRMAVINADQEVDAVFSDAMAVINDFLKK 210


>gi|147676397|ref|YP_001210612.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
 gi|189030835|sp|A5D690|KTHY_PELTS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146272494|dbj|BAF58243.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
          Length = 216

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 5/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG++G+GKTT I LL   L+     V  TREPGGT   E  R +LL+    E  
Sbjct: 3   GKFIVFEGVDGSGKTTQIKLLGEKLESMGCPVVYTREPGGTRVGERIREILLNPLYGELV 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AAAR  HV  VI PAL EGK++LCDRF DSS AYQG         L+ +   
Sbjct: 63  PWAEALLYAAARAQHVAQVILPALREGKVVLCDRFTDSSLAYQGYGRGVDIEMLEQVNRP 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V+PD  ++LD       +  Q     R     D  ER+    + + R  +L +A  
Sbjct: 123 AAAGVVPDLVLVLDFD-----REGQTERMARSGRSADRIEREAQEFYRRVRSGYLALAAR 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P R  ++D++ + + V  ++L    E++
Sbjct: 178 APRRYRVIDASRAEKLVHLDVLKAAEEVL 206


>gi|319654969|ref|ZP_08009043.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2]
 gi|317393394|gb|EFV74158.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2]
          Length = 208

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 118/203 (58%), Gaps = 10/203 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT I +L   L ++ Y V  TREPGG   AE  R V+L     
Sbjct: 1   MKKGKFITVEGPEGAGKTTIIDMLASNLAKEGYQVLQTREPGGIEIAEQIRSVILDKNNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
           +     EA+++AAAR  H+   ++PA+ +G I+LCDRF+DSS AYQG    ++ L +D  
Sbjct: 61  KMDPRTEALLYAAARRQHLAEKVKPAMDKGYIILCDRFIDSSLAYQG---YARGLGIDEV 117

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+   +++ +MP+ T+  D+  + GL R+ N++  RE   LD  E+ D   H K R+ +
Sbjct: 118 YSINSFAIEGMMPELTLYFDIEPEAGLDRI-NQHKGREVNRLD-LEKLD--FHHKVREGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSV 200
           L +    P+R   +D++ + + V
Sbjct: 174 LKLMELYPERIFKIDASGTLEEV 196


>gi|320451196|ref|YP_004203292.1| thymidylate kinase [Thermus scotoductus SA-01]
 gi|320151365|gb|ADW22743.1| thymidylate kinase [Thermus scotoductus SA-01]
          Length = 199

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 113/205 (55%), Gaps = 19/205 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F++ EG++G+GKTT   LL +FL+ K   V +TREPGG       R +LL    +  
Sbjct: 2   KGFFLTLEGLDGSGKTTQARLLAQFLEEKGIKVRLTREPGG--GLPGVRDLLLKG--EAL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++F+A R +HV  VI PAL EG  ++ DR+LDSS AYQG     Q L L  L+E
Sbjct: 58  SPEAEYLLFSADRAEHVRKVILPALEEGFWVISDRYLDSSLAYQG---YGQGLPLPWLKE 114

Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++ +  +   PD T +LDLP +  LKRV         +  D  ER  +   ++ RQ +L 
Sbjct: 115 VAKEATLGLKPDLTFLLDLPPEEALKRV---------SAPDRLERMGLPFFQRVRQGYLK 165

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A  +P+R  ++D+    + V   I
Sbjct: 166 LAAAEPERFRVLDATRPVEEVQAAI 190


>gi|317123732|ref|YP_004097844.1| thymidylate kinase [Intrasporangium calvum DSM 43043]
 gi|315587820|gb|ADU47117.1| thymidylate kinase [Intrasporangium calvum DSM 43043]
          Length = 223

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 10/190 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF+ FEG +GAGK+T + LL   L+R    V VTR+PGGTP     R ++L    D    
Sbjct: 22  LFVCFEGGDGAGKSTQVRLLAAALERAGRQVLVTRQPGGTPLGAQIRELVLHG--DHVSP 79

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AEA++FAA +  HV+ +IRPAL  G++++ DR+ DSS AYQG         +  LQ  +
Sbjct: 80  RAEALLFAADKAHHVDELIRPALAGGRVVITDRYTDSSIAYQGAGRDLGADEIRQLQHWA 139

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           V  + PD T++LD+  D+G  R    +   ES   D+        H   RQ FLD+A  +
Sbjct: 140 VGGLFPDLTVLLDVSPDVGRSRRGEVHDRLESEADDF--------HAAVRQGFLDLAARE 191

Query: 185 PDRCHIVDSA 194
           PDR  +VD+ 
Sbjct: 192 PDRYLVVDAG 201


>gi|310639487|ref|YP_003944245.1| thymidylate kinase [Paenibacillus polymyxa SC2]
 gi|309244437|gb|ADO54004.1| Thymidylate kinase [Paenibacillus polymyxa SC2]
          Length = 215

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 9/216 (4%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN  G+FI+ EG +G+GKTT I  L ++++ + + V  TREPGG   +E  R ++L    
Sbjct: 1   MNRKGIFITLEGGDGSGKTTMIQRLAKYMEEEGHPVVTTREPGGIEISEKIRSIILDPAH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AAAR  H+   ++PA+ +G I+LCDRF+DSS  YQG         + S
Sbjct: 61  TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +V +  PD T  LD+  ++GL R+    +      +D  + + +  H K R+ +L+
Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARI----NASRGEEMDRLDMESISFHHKVREAYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +AR  P+R  IVD++ + + V      ++ +L++KR
Sbjct: 177 LARKFPERITIVDASPAPEQVE----QVLKDLLKKR 208


>gi|288941602|ref|YP_003443842.1| thymidylate kinase [Allochromatium vinosum DSM 180]
 gi|288896974|gb|ADC62810.1| thymidylate kinase [Allochromatium vinosum DSM 180]
          Length = 215

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 5/197 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EGIEGAGK+T I+ L   L+ +  +V  TREPGG+  AE  R +LL        
Sbjct: 5   GRFITLEGIEGAGKSTQIAPLAELLRARGLNVLTTREPGGSALAERLRALLLDPDNQGMS 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR DH++  IRPAL  G  +LCDRF D++YAYQG         +  L+++
Sbjct: 65  ETTELLLMFAARADHLDRCIRPALAAGGWVLCDRFTDATYAYQGGGRGIDPARIALLEDL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T++ DLP ++GL R ++R     +   D FE +     E  R ++L+ AR 
Sbjct: 125 VQGDLRPDLTLVFDLPPELGLGRAKSR-----AGQTDRFESETRRFFETARAVYLERARA 179

Query: 184 QPDRCHIVDSAHSFQSV 200
            P+R  ++D+  S ++V
Sbjct: 180 NPERYRVIDATASLEAV 196


>gi|296128436|ref|YP_003635686.1| thymidylate kinase [Cellulomonas flavigena DSM 20109]
 gi|296020251|gb|ADG73487.1| thymidylate kinase [Cellulomonas flavigena DSM 20109]
          Length = 224

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 24/220 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+F+SFEG +G GK+T ++LL   L     +V VTREPGGTP     R  +L    DE 
Sbjct: 15  AGVFVSFEGGDGVGKSTQVALLGHHLAALGREVVVTREPGGTPLGIELRRAVLHG--DEL 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV +++RPAL  G ++L DR+LDSS AYQG   S + L  D ++ 
Sbjct: 73  DPRTEALLYAADRAHHVASLVRPALARGAVVLTDRYLDSSVAYQG---SGRGLGADEVER 129

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +S   V E++P  T++LDL   +GL R+       ESA  ++        H + R+ FL 
Sbjct: 130 LSLWAVDELLPHLTVLLDLDPVVGLARLTGDPDRLESAGDEF--------HRRTREAFLA 181

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
            A   P R  ++D++   + VA          V++R++PL
Sbjct: 182 RAAADPARWLVLDASQPAEDVAAQ--------VRERLAPL 213


>gi|283458750|ref|YP_003363389.1| thymidylate kinase [Rothia mucilaginosa DY-18]
 gi|283134804|dbj|BAI65569.1| thymidylate kinase [Rothia mucilaginosa DY-18]
          Length = 239

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 111/214 (51%), Gaps = 9/214 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI  EG +GAGKTT ++LL   L  + Y V  TREPGGT   E  R ++L  G     
Sbjct: 23  GLFIVVEGGDGAGKTTQLALLNEALSARGYRVITTREPGGTEIGEKLRALVLEAGQGTID 82

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
              EA++FAA+R  H   +IRPAL EG I+L DR++DSS AYQG  RD      +D L  
Sbjct: 83  DRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGIETIVD-LSR 141

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  +++PD T++L +P+    +R+  R        +D  E +      +    F  IAR
Sbjct: 142 WATADLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGAAFKARIHGAFEQIAR 195

Query: 183 NQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215
              +  H I+D   +   V   +L ++  L+  R
Sbjct: 196 EDANGSHRIIDGVGTIDEVHARVLEVIEPLLAAR 229


>gi|116333253|ref|YP_794780.1| thymidylate kinase [Lactobacillus brevis ATCC 367]
 gi|122270059|sp|Q03SS3|KTHY_LACBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116098600|gb|ABJ63749.1| thymidylate kinase [Lactobacillus brevis ATCC 367]
          Length = 214

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FISFEG +GAGKT+ +  +   ++    D + +TREPGG P +E+ R ++L      
Sbjct: 2   SGTFISFEGPDGAGKTSALQAITTQIKPVLGDQLVITREPGGNPISESIRAIILDRANTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL   K++LCDR++DSS AYQG         +  + 
Sbjct: 62  MDYRTEALLYAAARRQHLAQTILPALAADKLVLCDRYVDSSVAYQGAGRQIGEDAVAQMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P  T+  D+P +IGL+R+Q   + R+   +D  + +    H++ R  +L + 
Sbjct: 122 TFATDGLLPAVTVYFDVPAEIGLRRIQ---AHRDPQKVDRLDVEQAAFHDRVRAAYLRLQ 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              PDR  ++D+    ++V T  L ++ +  Q
Sbjct: 179 AAHPDRIKLIDATQKREAVVTTALTLIKQAAQ 210


>gi|23009766|ref|ZP_00050693.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1]
          Length = 137

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/130 (50%), Positives = 85/130 (65%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG EGAGK+T I+ L   LQ    +V  TREPGGT  AEA R  LL      FG
Sbjct: 8   GVFITFEGGEGAGKSTQIARLATALQGSGREVVTTREPGGTERAEALRAALLRGVAKPFG 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++FAAAR+DH+E +IRPAL  G ++LCDRF DS+ AYQG         + SL+ +
Sbjct: 68  PFAEALMFAAARIDHIETLIRPALARGAVVLCDRFADSTRAYQGAAGGLDPGLIASLERV 127

Query: 124 SVQEVMPDCT 133
           +++ + PD T
Sbjct: 128 TLEGLRPDLT 137


>gi|289577348|ref|YP_003475975.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
 gi|289527061|gb|ADD01413.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
          Length = 204

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 111/206 (53%), Gaps = 8/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  LK +L +K Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLDK-YNFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PA+ EGKI+L DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R +       D  ER+    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLERESWDFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R   ++       V  +I++ V
Sbjct: 174 EYPKRFVFINGMQEIVKVHQDIIDAV 199


>gi|238853621|ref|ZP_04643990.1| dTMP kinase [Lactobacillus gasseri 202-4]
 gi|238833765|gb|EEQ26033.1| dTMP kinase [Lactobacillus gasseri 202-4]
          Length = 213

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 11/210 (5%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ L+K+  +       +TREPGG+  +E  R ++L     E
Sbjct: 2   KGYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG     + L ++ ++
Sbjct: 62  MDDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQG---VGRDLGVEEVK 118

Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +I+      + PD TI LDL    GL R++   + +E    D  E++ +  H+K    ++
Sbjct: 119 QINDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHKKVYAGYI 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           D+ +  PDR   VD+    + VA N + I+
Sbjct: 175 DLLKRYPDRIKKVDANLPIEEVAANSVKII 204


>gi|282852748|ref|ZP_06262090.1| dTMP kinase [Lactobacillus gasseri 224-1]
 gi|282556490|gb|EFB62110.1| dTMP kinase [Lactobacillus gasseri 224-1]
          Length = 213

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKTT I+ L+K+  +       +TREPGG+  +E  R ++L     E 
Sbjct: 3   GYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG     ++L ++++++
Sbjct: 63  DDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQG---VGRNLGVEAVKQ 119

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+      + PD TI LDL    GL R++   + +E    D  E++ +  H+K    + D
Sbjct: 120 INDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHQKVYAGYTD 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +  PDR   VD+    + VA N + I+
Sbjct: 176 LLKRYPDRIKKVDANLPIKEVAANSVKII 204


>gi|154508479|ref|ZP_02044121.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798113|gb|EDN80533.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC
           17982]
          Length = 270

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 116/207 (56%), Gaps = 9/207 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG +G+GK+T I  ++ + + +  +V VTREPGGT      R  L+  G ++  
Sbjct: 5   GVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRR-LVQNGPEDVD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AA R  HV  VI PAL  G ++L DR++DSS AYQG   S     + SL   
Sbjct: 64  ARTEALLYAADRAYHVATVIAPALERGAVVLADRYIDSSLAYQGAARSLGVDEIGSLSAW 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + P  T +LDLP ++G +R  +          D  ER+ +  HE+ R  +L +A  
Sbjct: 124 ATRGLYPSLTFLLDLPPEVGARRRTD--------APDRMERESMDFHERVRHEYLRLADA 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
           +PDR  ++D+  +   V + I  ++ E
Sbjct: 176 EPDRIVVIDAVGTVDEVFSEIRGVLVE 202


>gi|256844526|ref|ZP_05550012.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN]
 gi|256613604|gb|EEU18807.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN]
          Length = 212

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 17/209 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59
           G F+SFEG +GAGK+T   +LK  L +   ++     VTREPGG+  AE  R ++L    
Sbjct: 3   GYFVSFEGPDGAGKST---VLKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPAN 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG   + + L +  
Sbjct: 60  DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 116

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +++I   +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    
Sbjct: 117 VKQINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNIL 205
           FL +    P+R   VD+      V   ++
Sbjct: 173 FLKVKETYPERFVTVDATQPIDQVVAQVI 201


>gi|218885132|ref|YP_002434453.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226732655|sp|B8DN41|KTHY_DESVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218756086|gb|ACL06985.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 215

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 3/216 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG+EG+GK+T ++ +++ L    + V +TREPGG+      R +LL    D+   
Sbjct: 1   MFITFEGMEGSGKSTALNRVQQVLLDAGHGVLLTREPGGSRLGRTLRSILLDLSNDDIVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  VIRPAL EG ++L DR+ DS+  YQG         L  L +++
Sbjct: 61  EAELFLYLADRAQHVGQVIRPALDEGVVVLSDRYADSTVVYQGYGRGLDPERLRELNDMA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182
           V  + PD T++ DLP + GL+R   R +LRE   +    FE + +  H + R+ +L  A 
Sbjct: 121 VGGLWPDLTLVFDLPPEEGLRRAMTR-NLREGTSVSEGRFEAEHLAFHARVREGYLTWAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
             P R  +VD+  +   V  +++  V  ++     P
Sbjct: 180 LHPARFRVVDATRTPDEVFEDVMRAVRSVLSAPARP 215


>gi|295692244|ref|YP_003600854.1| thymidylate kinase [Lactobacillus crispatus ST1]
 gi|295030350|emb|CBL49829.1| Thymidylate kinase [Lactobacillus crispatus ST1]
          Length = 212

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 17/209 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59
           G F+SFEG +GAGK+T   +LK  L +   ++     VTREPGG+  AE  R ++L    
Sbjct: 3   GYFVSFEGPDGAGKST---VLKEVLNQIGSELKTQYLVTREPGGSKIAEKIRDIILDPAN 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG   + + L +  
Sbjct: 60  DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 116

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +++I   +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    
Sbjct: 117 VKQINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNIL 205
           FL +    P+R   VD+      V   ++
Sbjct: 173 FLKVKETYPERFVTVDATQPIDQVVAQVI 201


>gi|329113408|ref|ZP_08242189.1| Thymidylate kinase [Acetobacter pomorum DM001]
 gi|326697233|gb|EGE48893.1| Thymidylate kinase [Acetobacter pomorum DM001]
          Length = 215

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 9/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EG GK+T + LLK  L+ +   V  TREPGG+  AE  R +LL  G +
Sbjct: 2   MACGMFITLEGAEGVGKSTQLRLLKEKLEAQGQKVLATREPGGSAGAEDLRQLLL-FGKN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A AE +   AAR DHV+ VI PAL  G+I+LCDRF DS+ AYQG   ++    + SL
Sbjct: 61  PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTLAYQGYGRANGDPAILSL 120

Query: 121 QEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             I  ++  + PD T +L  P  +  +R+  R      A  D +E+ D   H +    F 
Sbjct: 121 IAILQKQLGLQPDITFLLQAPRAVSRQRLAAR-----GAPTDRYEQADEAFHARLADGFA 175

Query: 179 DIARNQPDRCHIVD-SAHSFQSVATNILN 206
            IA+ +P R  +VD S +S + V   IL 
Sbjct: 176 HIAQAEPQRVVVVDTSVYSAEQVNAQILK 204


>gi|254670330|emb|CBA05726.1| Thymidylate kinase [Neisseria meningitidis alpha153]
          Length = 206

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 120/203 (59%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  I+DS  S   V  +I  ++
Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200


>gi|257454679|ref|ZP_05619935.1| thymidylate kinase [Enhydrobacter aerosaccus SK60]
 gi|257447989|gb|EEV22976.1| thymidylate kinase [Enhydrobacter aerosaccus SK60]
          Length = 213

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 109/204 (53%), Gaps = 10/204 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEG EG GK+T I+ L  +L  +  D   TREPGG+P AE  R +LL         +
Sbjct: 13  FISFEGTEGVGKSTLIANLAAYLTAQGIDFIQTREPGGSPFAEQLRAMLLDPATT-MTED 71

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQEIS 124
           +E ++  AAR DHV  VI PAL +G+ +LCDRF DS+ AYQG  R       L  ++ + 
Sbjct: 72  SELLLMFAARADHVAQVILPALAQGQWVLCDRFTDSTIAYQGFGRKQGDRAELSKIELLI 131

Query: 125 VQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              V  MPD TI LDLPV  G+ R +NR        LD FE+  +   E+  Q F   A+
Sbjct: 132 RHFVAKMPDMTIWLDLPVTEGMSRAKNR------GKLDRFEQNQLAFFERVHQGFAYQAQ 185

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
            +P R   +D+  +   V   +L 
Sbjct: 186 QEPQRVKRIDAQGTPDEVLAKVLT 209


>gi|271970386|ref|YP_003344582.1| dTMP kinase [Streptosporangium roseum DSM 43021]
 gi|270513561|gb|ACZ91839.1| dTMP kinase [Streptosporangium roseum DSM 43021]
          Length = 688

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG EG+GKTT   LL  +L+ + +DV  TREPG T      R +LL        
Sbjct: 468 GMFIAFEGGEGSGKTTQSRLLAIWLRDQGFDVVQTREPGSTKVGMRLRAILLDAVHQGLS 527

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A +EA+++AA R +HVE VIRPAL  G +++ DR++DSS AYQG   + +   +  +   
Sbjct: 528 ARSEALLYAADRAEHVEKVIRPALYRGSMVISDRYVDSSLAYQGAGRALEPGDVARINAW 587

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD T+++D P  +GL R+            D  E + +  HE+ R+ F  +A  
Sbjct: 588 ATGGLVPDLTVLIDTPPSVGLTRL--------GGAADRIESEPLEFHERVRREFRSLAAA 639

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+R  +VD   + + ++  I + V E++
Sbjct: 640 APERYLVVDGTLAQEQISLLIHDRVREVL 668


>gi|295425167|ref|ZP_06817871.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664]
 gi|295065143|gb|EFG56047.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664]
          Length = 216

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FIS EG +GAGK++ +  +L     + N    VTREPGG+  AE  R ++L     + 
Sbjct: 7   GYFISLEGPDGAGKSSVLEQVLNEIGPQLNTQYLVTREPGGSRIAEKIRQIILDPANVKM 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  HVE ++RPAL  GK++  DRF+DSS AYQG   + + L +D +++
Sbjct: 67  DDRTEALLYAAARSQHVEEIVRPALAAGKVVFSDRFVDSSLAYQG---AGRDLGIDQVKQ 123

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +   + PD T+  DL   IGL R+Q     +E    D  E++ +  HEK    +  
Sbjct: 124 INEFATGGIEPDLTLFFDLDPKIGLARIQKLRPDQE----DRLEQEKLAFHEKVYAGYQK 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           IAR  PDR   +D++  F  V    + I+
Sbjct: 180 IARQNPDRIVKIDASQPFDQVEAETIAII 208


>gi|262373085|ref|ZP_06066364.1| thymidylate kinase [Acinetobacter junii SH205]
 gi|262313110|gb|EEY94195.1| thymidylate kinase [Acinetobacter junii SH205]
          Length = 199

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 10/194 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKTT I  + ++ +++  +V +TREPGGTP AE  R +LL+   DE  +
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRTLLLAVNHDELMS 60

Query: 65  -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
            + E ++  AAR  H++ VI PAL  GKI+L DRF D+S+AYQ   R  SQ   L  L +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQCAGRGLSQEK-LQLLNQ 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V + MP+ T  LD P+++G+ R       RE   LD FE++ +    K R  +  + +
Sbjct: 120 TFVAK-MPNITFWLDAPIELGMTRA------RERGALDRFEQEKLSFFAKVRAGYKTLWQ 172

Query: 183 NQPDRCHIVDSAHS 196
            +P+R   +D+  +
Sbjct: 173 AEPERIKRLDATQN 186


>gi|182420064|ref|ZP_02951298.1| thymidylate kinase [Clostridium butyricum 5521]
 gi|237666856|ref|ZP_04526841.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376101|gb|EDT73688.1| thymidylate kinase [Clostridium butyricum 5521]
 gi|237658055|gb|EEP55610.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 211

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI FEG EG GKTT I  +  ++Q K+     TREPGG   +E  R V+L     
Sbjct: 1   MKKGLFIVFEGGEGTGKTTAIESIYDWIQEKDLKCIKTREPGGIKISEEIRQVILDKDNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
           +     EA+++AAAR  H+   + PAL EG ++LCDRF+DSS AYQG    ++ L +D  
Sbjct: 61  KMDGRTEALLYAAARRQHLVEKVIPALNEGYVVLCDRFIDSSLAYQG---FARGLGIDEV 117

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+ + ++ E MPD +I+ DL   IGL+R+      RE   LD  E+ D   HEK R+ +
Sbjct: 118 MSINKFAIGEYMPDLSILFDLEPKIGLERISTS-GEREINRLD-LEKID--FHEKVREGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + R   DR   +++  S + V   I  I+
Sbjct: 174 NKVYRENRDRIVRINAEQSKEGVLKEIKKIL 204


>gi|116629043|ref|YP_814215.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323]
 gi|311111161|ref|ZP_07712558.1| dTMP kinase [Lactobacillus gasseri MV-22]
 gi|116094625|gb|ABJ59777.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323]
 gi|311066315|gb|EFQ46655.1| dTMP kinase [Lactobacillus gasseri MV-22]
          Length = 217

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKTT I+ L+K+  +       +TREPGG+  +E  R ++L     E 
Sbjct: 7   GYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKEM 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG     ++L ++++++
Sbjct: 67  DDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQG---VGRNLGVEAVKQ 123

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+      + PD TI LDL    GL R++   + +E    D  E++ +  H+K    + D
Sbjct: 124 INDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHQKVYAGYTD 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +  PDR   VD+    + VA N + I+
Sbjct: 180 LLKRYPDRIKKVDANLPIKEVAANSVKII 208


>gi|311065067|ref|YP_003971793.1| thymidylate kinase [Bifidobacterium bifidum PRL2010]
 gi|310867387|gb|ADP36756.1| Tmk Thymidylate kinase [Bifidobacterium bifidum PRL2010]
          Length = 250

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 23/213 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------- 55
           +GLFISFEG++G GKTT +  L+ +L+    +V VTREPGGT    + R +LL       
Sbjct: 8   TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLRELGDAA 67

Query: 56  -SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
            + G D     AEA++FAA R  HV  V+RPAL  G +++ DR+LDSS AYQ      + 
Sbjct: 68  EADGTD-IAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQA---GGRE 123

Query: 115 LFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           L  D ++ +S+     +MP  T +LD+      +R+Q+     ESA  ++ +R       
Sbjct: 124 LTADDVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQHDADRMESAGDEFQQRT------ 177

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
             RQ FLD+A ++P R  ++D+A   ++V  +I
Sbjct: 178 --RQAFLDLAGHEPGRFRVIDAAWPIEAVWEHI 208


>gi|309792153|ref|ZP_07686625.1| dTMP kinase [Oscillochloris trichoides DG6]
 gi|308225694|gb|EFO79450.1| dTMP kinase [Oscillochloris trichoides DG6]
          Length = 230

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 118/226 (52%), Gaps = 11/226 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG+GK+T   LL   LQ   Y V +TREPGGT  +E  R +++     E   
Sbjct: 3   LFITFEGSEGSGKSTQARLLYERLQAVGYPVILTREPGGTRISELIRRIVMDLRHTEMAP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+AAR   V  +IRP L  G I+LCDR+ DS++AYQG         L ++  ++
Sbjct: 63  TTETLLFSAARAQLVSELIRPYLGTGGIVLCDRYADSTFAYQGYGLGRDLEELQAITTVA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRV--------QNRYSLRESACLDY--FERKDVMIHEKRR 174
              + PD T  LDLPV+ GL+R         QN      S  +++   + +D+  H++  
Sbjct: 123 TGGLQPDLTFYLDLPVEEGLRRKHLAKERAEQNAPGTTLSTPVEWNRLDARDLAYHQRVA 182

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
             F D+ R +P R  I+ +      +A  I   V  L+ KRV+ L 
Sbjct: 183 AGFADLIRKEPQRWRIIPAEQPIPILAEQIAQEVAPLL-KRVARLG 227


>gi|269214814|ref|ZP_06158844.1| dTMP kinase [Neisseria lactamica ATCC 23970]
 gi|269208972|gb|EEZ75427.1| dTMP kinase [Neisseria lactamica ATCC 23970]
          Length = 210

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 118/199 (59%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+    + G  
Sbjct: 7   FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPAT-KAGLR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 66  AETMMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P ++ + R+      RE    D FE+++    ++ RQ++L  A  QP
Sbjct: 126 GGLKPDLTLLLDVPPEVSMARIGQ---TREK---DRFEQEEAGFFKRVRQVYLQRAGRQP 179

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D + S ++V   I
Sbjct: 180 ERYAVIDGSRSPEAVGHQI 198


>gi|224283541|ref|ZP_03646863.1| Thymidylate kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|310288198|ref|YP_003939457.1| Thymidylate kinase [Bifidobacterium bifidum S17]
 gi|313140695|ref|ZP_07802888.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|309252135|gb|ADO53883.1| Thymidylate kinase [Bifidobacterium bifidum S17]
 gi|313133205|gb|EFR50822.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171]
          Length = 244

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 21/212 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           +GLFISFEG++G GKTT +  L+ +L+    +V VTREPGGT    + R +LL    D  
Sbjct: 2   TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLREPGDAA 61

Query: 61  -----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +    AEA++FAA R  HV  V+RPAL  G +++ DR+LDSS AYQ      + L
Sbjct: 62  EADGADIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQA---GGREL 118

Query: 116 FLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             D ++ +S+     +MP  T +LD+      +R+Q+     ESA  ++ +R        
Sbjct: 119 TADDVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQHDADRMESAGDEFQQRT------- 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            RQ FLD+A ++P R  ++D+A   ++V  +I
Sbjct: 172 -RQAFLDLAGHEPGRFRVIDAAWPIEAVWEHI 202


>gi|83644968|ref|YP_433403.1| thymidylate kinase [Hahella chejuensis KCTC 2396]
 gi|123533767|sp|Q2SK46|KTHY_HAHCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|83633011|gb|ABC28978.1| thymidylate kinase [Hahella chejuensis KCTC 2396]
          Length = 208

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 6/204 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EGIEGAGKTT+++ ++  L+    +V +TREPGGTP AE  R +LL    +
Sbjct: 1   MKKGLFITVEGIEGAGKTTNLNFIRSILEESGEEVVMTREPGGTPMAEEVRELLLRPREE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              + AE ++  AAR  H+E  I+P +  G  +L DRF D++YAYQG         +  L
Sbjct: 61  AVSSTAELLLMFAARAQHLEQKIKPTIERGVHVLSDRFTDATYAYQGGGRGLSWAMIQDL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++      PD T++L +  + G+ R + R        LD FER+ +  +   ++ ++  
Sbjct: 121 EKLVQAGFKPDLTLLLRIDPETGMARARKR------GALDRFEREKLEFYFCVQEGYMKR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
               P+R  +VD+  S + V   I
Sbjct: 175 VAEDPERFLVVDAQQSLEEVQAAI 198


>gi|313668856|ref|YP_004049140.1| thymidylate kinase [Neisseria lactamica ST-640]
 gi|313006318|emb|CBN87781.1| putative thymidylate kinase [Neisseria lactamica 020-06]
          Length = 208

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 118/199 (59%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPAT-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P ++ + R+      RE    D FE+++    ++ RQ++L  A  QP
Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ---TREK---DRFEQEEAGFFKRVRQVYLQRAGRQP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D + S ++V   I
Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196


>gi|52078523|ref|YP_077314.1| thymidylate kinase [Bacillus licheniformis ATCC 14580]
 gi|52783885|ref|YP_089714.1| thymidylate kinase [Bacillus licheniformis ATCC 14580]
 gi|319648552|ref|ZP_08002766.1| thymidylate kinase [Bacillus sp. BT1B_CT2]
 gi|81667281|sp|Q65PJ3|KTHY_BACLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52001734|gb|AAU21676.1| thymidylate kinase [Bacillus licheniformis ATCC 14580]
 gi|52346387|gb|AAU39021.1| Tmk [Bacillus licheniformis ATCC 14580]
 gi|317389319|gb|EFV70132.1| thymidylate kinase [Bacillus sp. BT1B_CT2]
          Length = 212

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 10/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+FEG EGAGKTT +      L +  + V  TREPGG   +E  R V+L+      
Sbjct: 2   NGLFITFEGPEGAGKTTILQAAADQLTKNGHSVLATREPGGIEISERIREVILNPSHTAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
             + EA+++AAAR  H+   ++PAL EGKI+LCDRF+DSS AYQG    ++ L +D   S
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEEGKIVLCDRFIDSSLAYQG---YARGLGIDEVFS 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++  +MP+ TI  D+  + G+KR+ +    RE   LD    + +  H+  ++ + +
Sbjct: 119 VNQFAIGSLMPNVTIYFDIDPEEGIKRI-DLNDAREKNRLDL---EKLHFHQLVQKGYEE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    P R  IVD++ S + V   + NI+ E +++
Sbjct: 175 VMNRFPGRFRIVDASQSVELVLKRVNNIIEEALKE 209


>gi|295094265|emb|CBK83356.1| thymidylate kinase [Coprococcus sp. ART55/1]
          Length = 207

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 106/172 (61%), Gaps = 12/172 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EG +GAGKTT   LLK +L++K YDV +TR+PGG P +EA R V+L+    E G
Sbjct: 3   GIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKDFTEMG 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120
              E +++A+AR   V+  I+PAL  G+ ++ DRF+DSS  YQG     + L +D+   +
Sbjct: 63  YMTELLLYASARAQLVKENIKPALDAGQAVIADRFVDSSAVYQG---IGRGLGVDTVYKV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            E ++Q +MPD T ++DL    G+ R +N+      A LD  E + +  H+K
Sbjct: 120 NEFALQGIMPDMTFLMDLDAQEGISRKKNQ------AELDRMENEKMEFHQK 165


>gi|220911618|ref|YP_002486927.1| dTMP kinase [Arthrobacter chlorophenolicus A6]
 gi|219858496|gb|ACL38838.1| dTMP kinase [Arthrobacter chlorophenolicus A6]
          Length = 232

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 11/216 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLFI+FEG +GAGK+T  + L   L+ +   V  TREPGGTP  E  R ++L  G   
Sbjct: 5   SAGLFIAFEGGDGAGKSTQAARLAEALESRGLTVLRTREPGGTPIGEKLRSLVLDHGHGH 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118
             A  EA++FAA+R  H   VIRPAL  G I+L DR++DSS AYQG   + + L +D   
Sbjct: 65  IDAHTEALIFAASRAAHAGQVIRPALERGDIVLTDRYIDSSVAYQG---AGRDLGMDAVR 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL E +   + P  T++LD+  ++G  R          A  D  E +    H + R+ FL
Sbjct: 122 SLNEWATSGLQPHLTVLLDVEPEVGRTRRTA-----GDATEDRLESEADEFHARIREAFL 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           D+A  +P    ++ +      +A  IL+ V+ L++ 
Sbjct: 177 DLAAARPASYLVLPARLPVNDLAAMILDRVFGLLES 212


>gi|242279385|ref|YP_002991514.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638]
 gi|259494265|sp|C6BUG6|KTHY_DESAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|242122279|gb|ACS79975.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638]
          Length = 217

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 3/194 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GKTT I  L  FL+   ++V VT EPGG+   +  R +LL+    +   
Sbjct: 1   MFITFEGIEGTGKTTQIKKLTAFLEESGHNVDVTLEPGGSRIGKELRKILLNMDSTDITG 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  ++ A R  HV  VI+PA+  GKI++ DRF DS+  YQG         L  L +++
Sbjct: 61  ECELFLYLADRAQHVGQVIKPAVEAGKIIISDRFADSTIVYQGYGRGLDPKLLRELNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182
           V    PD TI+LD+  +IGLKR   R +L+E+   +   FE + +  H + R+ +L  A 
Sbjct: 121 VSGNWPDLTILLDIDPEIGLKRAMTR-NLQENKMQEEGRFEAESLEFHNRVREGYLTWAA 179

Query: 183 NQPDRCHIVDSAHS 196
              DR  +V++  +
Sbjct: 180 LNNDRIVVVNADQT 193


>gi|159897030|ref|YP_001543277.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779]
 gi|229621739|sp|A9AV71|KTHY_HERA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|159890069|gb|ABX03149.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 236

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG+GK+T    LK +LQ+  Y V +TREPGGTP ++A R ++L         
Sbjct: 3   LFITFEGPEGSGKSTQARYLKDYLQQAGYPVILTREPGGTPISDAVRRLVLDGQWTAMEP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++FAAAR   V  VI P L  G I+LCDR+ DS++A+QG         L  +   +
Sbjct: 63  TTETLLFAAARAQLVGEVILPYLKLGGIVLCDRYADSTFAHQGYGLGRNLTELREITRFA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL---------------DYFER---K 165
              + PD T  LDLPV+ GL+R  + R   RES+ L               +++ R   +
Sbjct: 123 TGGLQPDLTFFLDLPVEQGLQRKRKQRDDFRESSQLALPLPHLPQPSPSQNEHWNRLDAR 182

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++  HE+ R  +L++    P R  + D+    +S+   +L  V
Sbjct: 183 EIAYHERVRSGYLEMIAADPQRWQVFDAGIERESLTEQLLLAV 225


>gi|121594087|ref|YP_985983.1| thymidylate kinase [Acidovorax sp. JS42]
 gi|171769451|sp|A1W6N2|KTHY_ACISJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120606167|gb|ABM41907.1| thymidylate kinase [Acidovorax sp. JS42]
          Length = 217

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 17/216 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEGI+GAGK++HI  L + L+   + V +TREPGGTP AE  R +LL    D
Sbjct: 1   MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVALTREPGGTPLAEKLREMLLH---D 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117
              A  EA++  AAR DH+  VI PAL  G+++LCDRF D+++AYQG     D     ++
Sbjct: 58  SMDALTEALLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117

Query: 118 DSLQEISV---QEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + L +  V    ++M  PD T+  D+P ++  +R      L  +   D FE + V    +
Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQR------LSAARAPDRFESQPVEFFTR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + + D A   P R   +DS+   + VA  +  +V
Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207


>gi|116669282|ref|YP_830215.1| thymidylate kinase [Arthrobacter sp. FB24]
 gi|116609391|gb|ABK02115.1| thymidylate kinase [Arthrobacter sp. FB24]
          Length = 226

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 113/215 (52%), Gaps = 7/215 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFI+FEG +GAGK+T  + L   L  +   V  TREPGGTP  E  R ++L  G   
Sbjct: 5   NPGLFIAFEGGDGAGKSTQAAALAGALDSRGIRVLRTREPGGTPIGEKLRSLVLDHGHGH 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAA+R  H + VI PAL  G+I+L DR++DSS AYQG         +  L 
Sbjct: 65  IDARTEALIFAASRAAHADQVILPALERGEIVLTDRYIDSSVAYQGAGRDLGTAAVRDLN 124

Query: 122 EISVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E +   + PD T++LD+   +G L+R          A  D  E +    H K R  FLD+
Sbjct: 125 EWATSGLQPDLTVLLDVDPAVGRLRRTAG------DAAEDRMESEADEFHAKIRTAFLDL 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A ++P+   ++ +      +A  IL  V  L+  R
Sbjct: 179 AADRPEHYLVLPAHLPVAELAGLILARVDSLIGSR 213


>gi|282898411|ref|ZP_06306402.1| Thymidylate kinase [Raphidiopsis brookii D9]
 gi|281196942|gb|EFA71847.1| Thymidylate kinase [Raphidiopsis brookii D9]
          Length = 216

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62
           G  I FEG+EG+GKTT + +L ++LQ       +TREPGGT   +  R +LL    ++  
Sbjct: 3   GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTDLGKNLRKLLLETSYEQPL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++ A R  HV ++I+P L  GK +LCDR+ +S+ AYQG         +D L +
Sbjct: 63  DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTIAYQGYGRGLNMTIIDQLNQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   +  D TI LD+ V+IGL R       R  A LD  E++ +  H + ++ + +IA+
Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQKGYNEIAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N P +   VD     + V  NI  I+
Sbjct: 177 NHPSKMIRVDGNGGQELVQENIRKIL 202


>gi|257790898|ref|YP_003181504.1| thymidylate kinase [Eggerthella lenta DSM 2243]
 gi|317488389|ref|ZP_07946944.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA]
 gi|325830525|ref|ZP_08163978.1| dTMP kinase [Eggerthella sp. HGA1]
 gi|257474795|gb|ACV55115.1| thymidylate kinase [Eggerthella lenta DSM 2243]
 gi|316912509|gb|EFV34063.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA]
 gi|325487434|gb|EGC89875.1| dTMP kinase [Eggerthella sp. HGA1]
          Length = 244

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 102/192 (53%), Gaps = 8/192 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG EGAGKTTHI  L   L+    +V   REPGGT   E  R V+L        
Sbjct: 14  GIFITFEGGEGAGKTTHIRFLSETLRAHGREVLCLREPGGTEVGEQLRAVVLDPANGGMS 73

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE +++ AAR   +  VI PAL  G ++LCDRF DS+ AYQ        +F+D + E 
Sbjct: 74  DEAELLIYEAARAQLMAQVIAPALARGAVVLCDRFTDSTVAYQAYGRGLPRMFVDRVNEF 133

Query: 124 SVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + Q V PD TI++      ++GL R  +R         D  E+     H +  + FL+IA
Sbjct: 134 ACQGVHPDRTILMATGGEANVGLVRATHR------GAADRLEQAGEEFHARVNEAFLEIA 187

Query: 182 RNQPDRCHIVDS 193
           R  P+R  +V S
Sbjct: 188 RRDPERVRVVVS 199


>gi|228476228|ref|ZP_04060931.1| dTMP kinase [Staphylococcus hominis SK119]
 gi|228269713|gb|EEK11212.1| dTMP kinase [Staphylococcus hominis SK119]
          Length = 205

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT ++ + + L  +NY+V  TREPGG    E  R++LL    +     
Sbjct: 4   FITFEGPEGSGKTTVLNQINKLLS-ENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   K++LCDR++DSS AYQG         +  + E ++
Sbjct: 61  TEALLFAASRREHLVEKVIPALKNNKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++ +  H+K  + +  + +  P
Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R  +VD+  S +SV +N   I+   ++
Sbjct: 176 ERFKVVDATQSIESVISNTYEIILSYLK 203


>gi|284048006|ref|YP_003398345.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731]
 gi|283952227|gb|ADB47030.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731]
          Length = 206

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 7/204 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+ EG +G GKTT    L R+ +    +  +TREPGGT  AE+ R ++L   +D 
Sbjct: 3   QKGLFITLEGPDGGGKTTQAQQLARWFRLYGRETVITREPGGTATAESIRELVLDPALD- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E ++  AAR DHV+ VIRPAL  GK+++CDRF DS+  YQG         L  L 
Sbjct: 62  LSPETETLLQLAARADHVDQVIRPALEAGKVVICDRFTDSTMVYQGILRDMDLAQLRKLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + + + + PD T++LD      +KR +NR        +D FE + +   ++ R  +L +A
Sbjct: 122 DFATRGLRPDVTLLLDGDPRELVKRRENR------GTVDKFELQGLAYQDRIRAGYLRLA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205
           + +P+R  +VD+    + V   I+
Sbjct: 176 QEEPERILVVDALREPEVVTEEII 199


>gi|326693439|ref|ZP_08230444.1| thymidylate kinase [Leuconostoc argentinum KCTC 3773]
          Length = 217

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 13/220 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ +  L   LQ +  +  VT REPGG P +EA R +L     
Sbjct: 1   MTKPLFITFEGPEGAGKTSVLQALVAELQPQLGEALVTTREPGGNPISEAIRAILQPAED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+ +V+ PAL  GK+++ DR++DSS AYQG     + L ++ 
Sbjct: 61  NGMDDRTEALLYTAARRQHLVSVVLPALEAGKVVISDRYVDSSLAYQG---GGRGLGIEQ 117

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175
           + +I   ++  +MPD TI  D+P ++GL RV  NR        +D  +++ +  H+  R+
Sbjct: 118 IWQINQFAIDGLMPDLTIYFDVPAEVGLARVMANRQD-----KIDRLDKESLAFHQAVRE 172

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +L + R+  DR  ++D+    + V      ++++++  R
Sbjct: 173 TYLALQRDFSDRIKLIDATQPLEQVIAETRTLLFDIIASR 212


>gi|296315027|ref|ZP_06864968.1| dTMP kinase [Neisseria polysaccharea ATCC 43768]
 gi|296838232|gb|EFH22170.1| dTMP kinase [Neisseria polysaccharea ATCC 43768]
          Length = 206

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+       +S   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIG------QSREKDRFEQEQEDFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  S   V  NI  ++
Sbjct: 178 ERYAVIDSNRSLDEVRNNIERVL 200


>gi|293194284|ref|ZP_06609970.1| dTMP kinase [Actinomyces odontolyticus F0309]
 gi|292819731|gb|EFF78745.1| dTMP kinase [Actinomyces odontolyticus F0309]
          Length = 271

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 15/210 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG +G+GK+T I  ++ + + +  +V VTREPGGT      R  L+  G ++  
Sbjct: 5   GVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRR-LVQNGPEDVD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120
           A  EA+++AA R  HV  VI PAL  G ++L DR++DSS AYQG   +++ L +D   SL
Sbjct: 64  ARTEALLYAADRAYHVATVIAPALERGAVVLGDRYIDSSLAYQG---AARSLGVDEIASL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + + + P  T +LDLP ++GL R  +          D  ER+ +  HE+ R  +L +
Sbjct: 121 SAWATRGLYPSLTFLLDLPPEVGLHRHTD--------APDRMERESMDFHERVRHEYLRL 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A  +PDR  ++D+  +   V + I  ++ E
Sbjct: 173 ADAEPDRIVVIDAVGTVDEVFSEIRGVLVE 202


>gi|239501058|ref|ZP_04660368.1| thymidylate kinase [Acinetobacter baumannii AB900]
          Length = 199

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KAEPERIKRIDATQS 186


>gi|88705148|ref|ZP_01102860.1| Thymidylate kinase [Congregibacter litoralis KT71]
 gi|88700843|gb|EAQ97950.1| Thymidylate kinase [Congregibacter litoralis KT71]
          Length = 209

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  +G  GAGKTT I  ++  LQ  N +   TREPGGTP  E  R +LLS    
Sbjct: 1   MKKGRMIVVDGSNGAGKTTVIEAIRDHLQHVNRETVFTREPGGTPIGEKIREILLSPEAG 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++FAAAR  HV   I PA+  GK+++ DRF  ++ ++Q          + +L
Sbjct: 61  EMADVTELMLFAAARAQHVREKIMPAVEAGKVVVSDRFDSATVSFQHYARGLPLELITTL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            EI+V  + PD TIILDL  + GL RV +R        LD  E++ +    K R  +L  
Sbjct: 121 NEIAVDGLKPDMTIILDLDPEAGLVRVGSR-----GDDLDRLEKEKLDFLHKARDGYLGQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A+  PD   ++D++ S  +V + +L++V ++++
Sbjct: 176 AKASPDNFVVIDASQSLDNVISEVLSVVDQVIE 208


>gi|194468114|ref|ZP_03074100.1| dTMP kinase [Lactobacillus reuteri 100-23]
 gi|194452967|gb|EDX41865.1| dTMP kinase [Lactobacillus reuteri 100-23]
          Length = 213

 Score =  129 bits (324), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 6/203 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ I  ++R L  Q     V  TREPGG   +E  R VL      +
Sbjct: 3   GKFISFEGPDGAGKTSVIQQIQRELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDRF+DSS AYQG         +  + 
Sbjct: 63  MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  +MP  TI LD+  +IGLKR+    +   S  ++  + + +  H   RQ +L + 
Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRI----AEHRSNQVNRLDEEKLEFHRTVRQSYLKLY 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           +N P+R  ++D++   + V  ++
Sbjct: 179 QNYPERIKLIDASQPLKKVIEDV 201


>gi|294011646|ref|YP_003545106.1| dTMP kinase [Sphingobium japonicum UT26S]
 gi|292674976|dbj|BAI96494.1| dTMP kinase [Sphingobium japonicum UT26S]
          Length = 213

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/209 (39%), Positives = 111/209 (53%), Gaps = 5/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FIS EG EGAGK+T +  L   L+ +  DV  TREPGG+  AEA R +LL+ G D + 
Sbjct: 9   GRFISLEGGEGAGKSTQLRALAAALRARGLDVVETREPGGSEGAEAIRALLLTGGADRWS 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++FAAAR DHVE  IRPAL  G  +L DRFLDSS AYQG    +    L +L  I
Sbjct: 69  PRAEALLFAAARADHVEKTIRPALERGAWVLSDRFLDSSRAYQGMGALTDADIL-ALHRI 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                +PD T+ L LP +    R ++    R+    D    +D   H      F   A  
Sbjct: 128 GSDGFLPDRTLFLTLPEEEASARARS----RDGDAADRIGGRDRDFHLAVSTAFHRFAAQ 183

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P R   VD++    +V   ++  V +L+
Sbjct: 184 EPTRFLAVDASGEAGAVTARLIEAVRDLL 212


>gi|169632744|ref|YP_001706480.1| thymidylate kinase [Acinetobacter baumannii SDF]
 gi|184159124|ref|YP_001847463.1| thymidylate kinase [Acinetobacter baumannii ACICU]
 gi|260556574|ref|ZP_05828792.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606]
 gi|294841418|ref|ZP_06786101.1| thymidylate kinase [Acinetobacter sp. 6014059]
 gi|229487548|sp|B2HWQ7|KTHY_ACIBC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487549|sp|B0VTL6|KTHY_ACIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169151536|emb|CAP00303.1| thymidylate kinase [Acinetobacter baumannii]
 gi|183210718|gb|ACC58116.1| Thymidylate kinase [Acinetobacter baumannii ACICU]
 gi|260409833|gb|EEX03133.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606]
 gi|322509038|gb|ADX04492.1| tmk [Acinetobacter baumannii 1656-2]
 gi|323519020|gb|ADX93401.1| thymidylate kinase [Acinetobacter baumannii TCDC-AB0715]
          Length = 199

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KAEPERIKRLDATQS 186


>gi|59800692|ref|YP_207404.1| thymidylate kinase [Neisseria gonorrhoeae FA 1090]
 gi|194097952|ref|YP_002000998.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945]
 gi|240013551|ref|ZP_04720464.1| thymidylate kinase [Neisseria gonorrhoeae DGI18]
 gi|240015990|ref|ZP_04722530.1| thymidylate kinase [Neisseria gonorrhoeae FA6140]
 gi|240080130|ref|ZP_04724673.1| thymidylate kinase [Neisseria gonorrhoeae FA19]
 gi|240112344|ref|ZP_04726834.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|240115084|ref|ZP_04729146.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|240117368|ref|ZP_04731430.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|240120623|ref|ZP_04733585.1| thymidylate kinase [Neisseria gonorrhoeae PID24-1]
 gi|240122923|ref|ZP_04735879.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|240125177|ref|ZP_04738063.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|240127632|ref|ZP_04740293.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|254493144|ref|ZP_05106315.1| thymidylate kinase [Neisseria gonorrhoeae 1291]
 gi|260441100|ref|ZP_05794916.1| thymidylate kinase [Neisseria gonorrhoeae DGI2]
 gi|268596281|ref|ZP_06130448.1| thymidylate kinase [Neisseria gonorrhoeae FA19]
 gi|268598402|ref|ZP_06132569.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|268600757|ref|ZP_06134924.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|268603063|ref|ZP_06137230.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|268681542|ref|ZP_06148404.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|268683771|ref|ZP_06150633.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|268686011|ref|ZP_06152873.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044433|ref|ZP_06570142.1| thymidylate kinase [Neisseria gonorrhoeae DGI2]
 gi|293399613|ref|ZP_06643766.1| thymidylate kinase [Neisseria gonorrhoeae F62]
 gi|73920825|sp|Q5F9Z5|KTHY_NEIG1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621733|sp|B4RJR3|KTHY_NEIG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59717587|gb|AAW88992.1| putative thymidylate kinase [Neisseria gonorrhoeae FA 1090]
 gi|193933242|gb|ACF29066.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945]
 gi|226512184|gb|EEH61529.1| thymidylate kinase [Neisseria gonorrhoeae 1291]
 gi|268550069|gb|EEZ45088.1| thymidylate kinase [Neisseria gonorrhoeae FA19]
 gi|268582533|gb|EEZ47209.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|268584888|gb|EEZ49564.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|268587194|gb|EEZ51870.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|268621826|gb|EEZ54226.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|268624055|gb|EEZ56455.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|268626295|gb|EEZ58695.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011327|gb|EFE03323.1| thymidylate kinase [Neisseria gonorrhoeae DGI2]
 gi|291610182|gb|EFF39304.1| thymidylate kinase [Neisseria gonorrhoeae F62]
          Length = 206

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---AREK---DRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  S   V  +I  ++
Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200


>gi|227824456|ref|ZP_03989288.1| thymidylate kinase [Acidaminococcus sp. D21]
 gi|226904955|gb|EEH90873.1| thymidylate kinase [Acidaminococcus sp. D21]
          Length = 205

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 118/215 (54%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT    LK +L+ K  +V +TREPGGT  AE  R + LS  + 
Sbjct: 1   MKKGLFITLEGPDGSGKTTQAKRLKAYLETKGREVVLTREPGGTGLAETLRSLALSPEI- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E+++  AAR DHV+ VIRPAL  GK+++CDRF DS+  YQG       + LD L
Sbjct: 60  TMSKRVESLLHVAARADHVDKVIRPALEAGKVVICDRFSDSTLIYQGILGG---MDLDEL 116

Query: 121 QEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + +S+   + + PD T ++D    + L R + R         D FE + ++  EK RQ +
Sbjct: 117 ERLSLFGSKGLSPDVTFLIDGNPRVLLSRREAR------GVTDKFEAQGLLFQEKIRQGY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L +    P+R  ++D   +  SV   ++  V + +
Sbjct: 171 LTLLDRYPERMILIDGEGTPDSVTDALIKKVEKFL 205


>gi|261392957|emb|CAX50542.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis 8013]
 gi|325141921|gb|EGC64362.1| thymidylate kinase [Neisseria meningitidis 961-5945]
          Length = 206

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  I+DS  S   V  +I  ++
Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200


>gi|226952159|ref|ZP_03822623.1| thymidylate kinase [Acinetobacter sp. ATCC 27244]
 gi|226837095|gb|EEH69478.1| thymidylate kinase [Acinetobacter sp. ATCC 27244]
          Length = 201

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 12/210 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ +++  +V +TREPGGTP AE  R +LL+   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GKI+L DRF D+S+AYQ    S + L  + LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEAGKIVLSDRFTDASFAYQC---SGRGLSQEKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R  +  + 
Sbjct: 118 NQTFVAKMPNITFWLDAPIELGMTRA------RERGALDRFEQEKLSFFAKVRAGYETLW 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + +P+R   +++  +   V    LN + +L
Sbjct: 172 QAEPERIKRLNATQNADLVFEEALNYIKQL 201


>gi|295702267|ref|YP_003595342.1| thymidylate kinase [Bacillus megaterium DSM 319]
 gi|294799926|gb|ADF36992.1| thymidylate kinase [Bacillus megaterium DSM 319]
          Length = 208

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 4/198 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT I ++++ L ++ Y++ +TREPGG   AE  R ++L+    E 
Sbjct: 2   SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYNIVLTREPGGIRIAEQIREIILNPSNTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + P L +G I+LCDRF+DSS AYQG         + ++ +
Sbjct: 62  DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++++ MP  T+  D+  ++GL+R+ N+    E   LD    + +  H K R  +L +  
Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERI-NKGRKDEINRLDL---ESLDFHYKVRDGYLSLLS 177

Query: 183 NQPDRCHIVDSAHSFQSV 200
             P+R   +D+  S + V
Sbjct: 178 EFPERIRRIDANQSVEKV 195


>gi|302873019|ref|YP_003841652.1| thymidylate kinase [Clostridium cellulovorans 743B]
 gi|307688812|ref|ZP_07631258.1| thymidylate kinase [Clostridium cellulovorans 743B]
 gi|302575876|gb|ADL49888.1| thymidylate kinase [Clostridium cellulovorans 743B]
          Length = 212

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G  I+ EG +G+GK+T I LLK++   + Y+V  TREPGGT  +E  R ++L    +E
Sbjct: 8   NRGYLITIEGPDGSGKSTQIELLKKYFNDRGYEVVTTREPGGTKISEKIRELILDNDNEE 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120
                EA+++AA+R   VE V++PA+ EGKI+LCDRF+ SS  YQG  R+   +  L+ +
Sbjct: 68  MNGICEALLYAASRAQLVEQVLKPAIYEGKIVLCDRFVHSSLVYQGYARELGVNQVLN-I 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++  +  D TI++D+P ++G++R       R+   LD  E      H K    +  I
Sbjct: 127 NEFALNGLKADLTIMIDIPYELGIERK------RKQKKLDRLENGGDEFHNKVFNGYQQI 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +   +   I+D   + + +  +I+  + EL
Sbjct: 181 VKTMKNVV-IIDGTKAVEEIHKDIVKTIAEL 210


>gi|146277283|ref|YP_001167442.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17025]
 gi|145555524|gb|ABP70137.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17025]
          Length = 217

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 5/206 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++ EGI+G+GK+  +  L   L+    +V VTREPGGTP  EA R ++L+   + 
Sbjct: 4   QGGLFLAVEGIDGSGKSGIVQHLAARLRAHGREVVVTREPGGTPEGEAIRGLVLAGADEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   AE ++  AAR+ HV  VI PAL  G ++L DR+  S+ AYQG        F+ +L 
Sbjct: 64  WDPMAELLLMTAARVQHVRRVIAPALEAGSVVLSDRYAGSTLAYQGTGRGLSESFIRALH 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLD 179
             +  ++ PD T+ILDL    GL R + R +    + +D   FE  D+  HE+ RQ F  
Sbjct: 124 AEATGDLWPDLTLILDLDAATGLARSRRRLT---GSAIDEGRFESLDLAFHERIRQSFRA 180

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
            A   P R  ++D++ + + V    L
Sbjct: 181 QAARDPARHAVIDASGTPEQVQARAL 206


>gi|284989206|ref|YP_003407760.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
 gi|284062451|gb|ADB73389.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
          Length = 225

 Score =  129 bits (323), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 12/216 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG EGAGK+T + LL  +L  +      T EPGGTPA  A R ++L        
Sbjct: 19  GLFIAFEGGEGAGKSTQVRLLCEWLTAQGRPARATFEPGGTPAGAAVRAIVLDRAHTGLS 78

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  H   V+RPAL  G++++ DR++DSS AYQG   + + + LD +  I
Sbjct: 79  PRAEALLYAADRAQHAHAVLRPALEAGEVVVTDRYVDSSLAYQG---AGRTIGLDDVAAI 135

Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S    +   PD T++LDLP + GL R +        A  D  E + +  H++ R  F  +
Sbjct: 136 SRWATLGLRPDLTVLLDLPPETGLARARG------RAAADRLESESLEFHQRVRDTFRTL 189

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           A  +P R  ++D+      +A ++   V  L+ +R 
Sbjct: 190 AAAEPGRYLVLDATRGVDELAADVRARVGALLGERA 225


>gi|258591911|emb|CBE68216.1| thymidylate kinase [NC10 bacterium 'Dutch sediment']
          Length = 243

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 111/213 (52%), Gaps = 11/213 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F++FEG EG+GKTT + LL   ++    +V  T +PGGT   +  R +LL  G     
Sbjct: 20  GIFVTFEGGEGSGKTTQLKLLANRIRASGKEVIETHDPGGTAIGKEIRTLLLDPGSAPIA 79

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  E +++ A+R   V  +I P L +G ++LCDRF DS+ AYQG   S     +  L   
Sbjct: 80  STTELLLYEASRAQLVRELIAPTLRQGVVVLCDRFTDSTLAYQGFGRSLDLDLIQRLNRC 139

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL-------RESACLDYFERKDVMIHEKRRQI 176
           +   V+PD TI+ DL  +IGL R +   SL        E AC D  E + +  H + R+ 
Sbjct: 140 ATDGVVPDLTILFDLDPEIGLTRCRRDTSLDAVTGSGAEPACWDRIEAEPLEFHRRIREG 199

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +L +AR   DR  ++D+        T I  IVW
Sbjct: 200 YLALARENRDRMIVIDAGVGV----TEIETIVW 228


>gi|229816418|ref|ZP_04446719.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
           13280]
 gi|229807960|gb|EEP43761.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
           13280]
          Length = 226

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 105/201 (52%), Gaps = 6/201 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EGI+G GK+T   L+   L+   +DV   REPGG   +E  R +LL     E G
Sbjct: 5   GLFITVEGIDGCGKSTQARLIAAALEAAGHDVLRLREPGGVKISEQIREILLDPANVEMG 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++ AAR   V  VIRPAL  GK ++CDRF DS+ AYQ   D      +    E+
Sbjct: 65  DVCELLLYEAARAQLVHQVIRPALAAGKTVVCDRFYDSTTAYQAFADGLDRNMVSQANEL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V    PD T++ DLPV+  L+R   R +       D  E K +   E+    F  +A +
Sbjct: 125 AVDGCRPDLTLVFDLPVEDALRRRSGREA------EDRLELKGLEFQERVAAGFRAVAVD 178

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
           +PDR  ++D+  S   V + +
Sbjct: 179 EPDRVKLIDAGGSIAEVFSGV 199


>gi|114762660|ref|ZP_01442094.1| thymidylate kinase [Pelagibaca bermudensis HTCC2601]
 gi|114544570|gb|EAU47576.1| thymidylate kinase [Roseovarius sp. HTCC2601]
          Length = 208

 Score =  128 bits (322), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 115/203 (56%), Gaps = 6/203 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFISFEGI+G+GK+T   LL   L+    +V +TREPGG+P AE  R ++L    + 
Sbjct: 4   GTGLFISFEGIDGSGKSTQARLLAEHLRSTGREVVLTREPGGSPGAEEIRALVLQGDPER 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  IRPAL  G  ++CDRF DS+  YQG         +D+L 
Sbjct: 64  WSAETELLLFTAARRDHLERTIRPALARGATVICDRFADSTRMYQGLSRGDLRGAVDTLH 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  V PD T+++D+  +  L R + R +  E      FE   + + +K R  FL +A
Sbjct: 124 ALMIG-VEPDLTLLIDMDPEAALARAKARATAEE-----RFEDFGLPLQQKMRAGFLALA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
                R  IVD   + ++VA ++
Sbjct: 178 AEFSGRFRIVDGNRAPEAVAQDV 200


>gi|294496900|ref|YP_003560600.1| thymidylate kinase [Bacillus megaterium QM B1551]
 gi|294346837|gb|ADE67166.1| thymidylate kinase [Bacillus megaterium QM B1551]
          Length = 208

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 114/198 (57%), Gaps = 4/198 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT I ++++ L ++ Y + +TREPGG   AE  R ++L+    E 
Sbjct: 2   SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYTIVLTREPGGIRIAEQIREIILNPSNTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + P L +G I+LCDRF+DSS AYQG         + ++ +
Sbjct: 62  DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++++ MP  T+  D+  ++GL+R+ N         ++  + + +  H K R  +L +  
Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERINN----GRKDEINRLDLESLDFHYKVRDGYLSLLS 177

Query: 183 NQPDRCHIVDSAHSFQSV 200
             P+R   +D+  S + V
Sbjct: 178 EFPERIRRIDANQSVEKV 195


>gi|315644344|ref|ZP_07897484.1| thymidylate kinase [Paenibacillus vortex V453]
 gi|315280221|gb|EFU43513.1| thymidylate kinase [Paenibacillus vortex V453]
          Length = 214

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ EG EG+GKTT +  L  F+Q  +    +TREPGG   AE  R ++L        A
Sbjct: 7   LFITLEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRSIILDPEHTAMDA 66

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AAAR  H+   + PAL +G  +LCDRF+DSS  YQG         + S+ + +
Sbjct: 67  RTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVWSINQFA 126

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++ D+   IGL R+      RE   LD    +++  HEK R+ +L +A   
Sbjct: 127 IDTRMPDLTLLFDIEPKIGLSRIAANAE-REWNRLDM---ENLTFHEKVREGYLLVAERN 182

Query: 185 PDRCHIVDSAHS 196
           PDR  IVD++ +
Sbjct: 183 PDRIRIVDASKT 194


>gi|199599031|ref|ZP_03212438.1| Thymidylate kinase [Lactobacillus rhamnosus HN001]
 gi|258509257|ref|YP_003172008.1| thymidylate kinase [Lactobacillus rhamnosus GG]
 gi|199590067|gb|EDY98166.1| Thymidylate kinase [Lactobacillus rhamnosus HN001]
 gi|257149184|emb|CAR88157.1| Thymidylate kinase [Lactobacillus rhamnosus GG]
 gi|259650539|dbj|BAI42701.1| thymidylate kinase [Lactobacillus rhamnosus GG]
          Length = 215

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 4/209 (1%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ + +L+ +        VH+TREPGG   +E  R V+L      
Sbjct: 2   TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+PV +GL R+      R+    D  +++ +  HE+    ++ + 
Sbjct: 122 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ---YDRLDQESLAFHERVHAAYMKLV 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + P R   VD+     +V T     + E
Sbjct: 179 ADNPKRIVTVDATQPLAAVVTAAFMTITE 207


>gi|254804548|ref|YP_003082769.1| Thymidylate kinase [Neisseria meningitidis alpha14]
 gi|254668090|emb|CBA04608.1| Thymidylate kinase [Neisseria meningitidis alpha14]
 gi|325127822|gb|EGC50730.1| thymidylate kinase [Neisseria meningitidis N1568]
          Length = 206

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  +   V  +I  ++
Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200


>gi|50085662|ref|YP_047172.1| thymidylate kinase [Acinetobacter sp. ADP1]
 gi|59798252|sp|Q6F9B5|KTHY_ACIAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49531638|emb|CAG69350.1| thymidylate kinase [Acinetobacter sp. ADP1]
          Length = 202

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 113/209 (54%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  L    +     V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKLYEHFEASGKQVVLTREPGGTPLAEQIRSLLLAVNHDEPMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           ++ E ++  AAR  H++ VI PAL + K++L DRF D+SYAYQ          L++L + 
Sbjct: 61  SDTELLLMYAARAQHLQQVIVPALADEKLVLSDRFTDASYAYQCVGRGLSKDKLNTLNQT 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T  LD P+++G+ R       RE   LD FE++ V   ++ RQ +  +   
Sbjct: 121 FVSH-MPDITFWLDAPIELGMSRA------RERGALDRFEQEKVEFFQRVRQGYQQLHEL 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+R   +D+  + + V    L  +  LV
Sbjct: 174 YPERIKRLDATQAPEIVFQEALEHIQALV 202


>gi|328478590|gb|EGF48257.1| thymidylate kinase [Lactobacillus rhamnosus MTCC 5462]
          Length = 226

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 4/209 (1%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ + +L+ +        VH+TREPGG   +E  R V+L      
Sbjct: 13  TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 73  MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+PV +GL R+      R+    D  +++ +  HE+    ++ + 
Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ---YDRLDQESLAFHERVHAAYMKLV 189

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + P R   VD+     +V T     + E
Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITE 218


>gi|229487554|sp|A3M7Q1|KTHY_ACIBT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|193078024|gb|ABO12945.2| thymidylate kinase [Acinetobacter baumannii ATCC 17978]
          Length = 199

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KVEPERIKRLDATQS 186


>gi|78187170|ref|YP_375213.1| thymidylate kinase [Chlorobium luteolum DSM 273]
 gi|123582911|sp|Q3B3B1|KTHY_PELLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78167072|gb|ABB24170.1| thymidylate kinase [Chlorobium luteolum DSM 273]
          Length = 214

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 4/209 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L  +L+++  +V   REPGGT  AE  RH+LL    D    
Sbjct: 1   MLITFEGIDGAGKSTQIQKLAAYLKQEGREVLTLREPGGTEVAEKIRHILLESRHD-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V  V+RPAL EGK ++ DRF DS+ AYQG         L +L  IS
Sbjct: 60  VGELLLFSASRAELVSEVVRPALAEGKTVILDRFFDSTTAYQGYGRGLDLNMLRTLIAIS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  SL    E+  LD  ER  +  +   RQ +LDI 
Sbjct: 120 TGALTPDITFYLDILPEEALIRKFSEKSLPLAFENEELDRMERSGLEFYRNVRQGYLDII 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             +P R   +++ H  Q +   I+  + E
Sbjct: 180 EAEPGRFKSINARHGVQEIHAIIVKTLNE 208


>gi|282901980|ref|ZP_06309878.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
 gi|281193067|gb|EFA68066.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
          Length = 216

 Score =  128 bits (322), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62
           G  I FEG+EG+GKTT + +L ++LQ       +TREPGGT   +  R +LL    ++  
Sbjct: 3   GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTHLGQNLRKLLLETFYEQPL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++ A R  HV ++I+P L  GK +LCDR+ +S+ AYQG       + +D L +
Sbjct: 63  DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTVAYQGYGRGLNMIIIDQLNQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   +  D TI LD+ V+IGL R       R  A LD  E++ +  H + ++ +  IA+
Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQEGYNKIAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N P +   VD     + V  NI  I+
Sbjct: 177 NHPSKIIRVDGNREPELVQENIRKIL 202


>gi|239908616|ref|YP_002955358.1| thymidylate kinase [Desulfovibrio magneticus RS-1]
 gi|259494267|sp|C4XNX1|KTHY_DESMR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|239798483|dbj|BAH77472.1| thymidylate kinase [Desulfovibrio magneticus RS-1]
          Length = 209

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 7/212 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +F++FEG+EG+GK+T ++ L   L+     V  TR+PGG    +  R +LLS    G+D+
Sbjct: 1   MFVTFEGVEGSGKSTQMTRLCAALEAAGRTVCRTRQPGGCFLGQTLRAILLSQKTAGLDD 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE  ++ A R  HV  VIRPAL  G++++CDR+ DS+ AYQG         L +L 
Sbjct: 61  ---RAELFLYLADRAQHVAEVIRPALAAGQVVVCDRYTDSTVAYQGYGRGLDTTLLQNLN 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++   V+PD T++LDL   IGL R  +R  +   +     FE + +  H++ R  +  +
Sbjct: 118 AVAAAGVVPDLTVLLDLDPAIGLTRATSRNAAAGTAEAEGRFEAERLEFHQRVRAGYRAL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +P R  ++D+A S  +VA  +  +V +L+
Sbjct: 178 AAAEPARFAVIDAAPSPDAVAEAVWGVVGKLL 209


>gi|294651029|ref|ZP_06728369.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823130|gb|EFF81993.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194]
          Length = 199

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 114/195 (58%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ +++  +V +TREPGGTP AE  R +LL+   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GKI+L DRF D+S+AYQ    S + L  + LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQC---SGRGLSQEKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R  +  + 
Sbjct: 118 NQTFVAKMPNITFWLDAPIELGMTRA------RERGALDRFEQEKLSFFAKVRAGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  +
Sbjct: 172 QAEPERIKRLDATQN 186


>gi|15676568|ref|NP_273712.1| thymidylate kinase [Neisseria meningitidis MC58]
 gi|14285516|sp|Q9K0D9|KTHY_NEIMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|7225896|gb|AAF41088.1| thymidylate kinase [Neisseria meningitidis MC58]
 gi|316983637|gb|EFV62618.1| thymidylate kinase [Neisseria meningitidis H44/76]
 gi|325139881|gb|EGC62412.1| thymidylate kinase [Neisseria meningitidis CU385]
 gi|325200644|gb|ADY96099.1| thymidylate kinase [Neisseria meningitidis H44/76]
          Length = 206

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++LD A   P
Sbjct: 124 GGLKPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  +   V  +I  ++
Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200


>gi|322420736|ref|YP_004199959.1| thymidylate kinase [Geobacter sp. M18]
 gi|320127123|gb|ADW14683.1| thymidylate kinase [Geobacter sp. M18]
          Length = 223

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 107/191 (56%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG+EG GKTT + LLK  L+     V  TREPGG P A+  R +LL        
Sbjct: 2   GFFITFEGVEGCGKTTQLRLLKERLESAGEQVVATREPGGCPIADQMRAILLDAKNSAIT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV+ VI PAL  G+ +LCDRF D++ AYQG         +  L  +
Sbjct: 62  PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRELDLDVIRQLNAL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V P  T+++D PV+IGL R  +R      A  + FE + V  HE+ R  +L +A+ 
Sbjct: 122 ATGGVEPAVTVLIDCPVEIGLSRALSRIEATSGAREERFELESVRFHERVRAGYLSLAKA 181

Query: 184 QPDRCHIVDSA 194
            P R  +VD +
Sbjct: 182 FPRRFVVVDGS 192


>gi|293609834|ref|ZP_06692136.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828286|gb|EFF86649.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 199

 Score =  128 bits (321), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  +     V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KAEPERIKRIDATQS 186


>gi|325123060|gb|ADY82583.1| thymidylate kinase [Acinetobacter calcoaceticus PHEA-2]
          Length = 199

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  +     V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KAEPERIKRIDATQS 186


>gi|309775015|ref|ZP_07670030.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917233|gb|EFP62958.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 210

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 6/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLFI+FEG +G+GKTT   L    L+   Y V  TREPGG   AE  R V+L     
Sbjct: 1   MNKGLFITFEGNDGSGKTTISKLAYERLKEMGYPVIYTREPGGIDIAEQIRKVILDPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AA+R  H+   + PAL EG I+LCDRF+DSS  YQG         + ++
Sbjct: 61  AMDERCEALLYAASRRQHLVEKVLPALNEGSIVLCDRFVDSSLVYQGIARGIGMEEVYAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +++  +PD TI L +  + GL RV +R         D  + + +  H+   Q +  I
Sbjct: 121 NQFAIEGHLPDATIFLSVDFETGLSRVTSR------GNKDRLDNESMEFHKLVAQGYELI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                DR HIVD+     +V  N ++ + E+++  V
Sbjct: 175 KEKFKDRMHIVDANADVDTVLNNTVSCIMEIIKNHV 210


>gi|294676800|ref|YP_003577415.1| thymidylate kinase [Rhodobacter capsulatus SB 1003]
 gi|294475620|gb|ADE85008.1| thymidylate kinase [Rhodobacter capsulatus SB 1003]
          Length = 206

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 6/212 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T   LL   L     DV  TREPGG+P AE  R ++L    D + A
Sbjct: 1   MFITFEGIDGSGKSTQARLLAEALAGLGRDVIRTREPGGSPGAEEIRALVLQGDPDRWSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E ++F AAR DH+E  I PAL  G++++CDRF DS+  YQG         +D L  + 
Sbjct: 61  KTEILLFTAARRDHLERTIAPALAAGQVVICDRFADSTRMYQGLSRGDLRGLVDDLHRLM 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    PD T ++D+   +GL R + R    E      FE   + +  + R  FL +++  
Sbjct: 121 IGR-EPDLTFLIDIDPAVGLARAKGRQGHEE-----RFEDMGLAMQVRMRAGFLALSQEF 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             R  +++      +VA  +L++    ++ R 
Sbjct: 175 SSRFKVIEGDRRPDAVAAEVLDVTLAALRARA 206


>gi|222111179|ref|YP_002553443.1| thymidylate kinase [Acidovorax ebreus TPSY]
 gi|221730623|gb|ACM33443.1| thymidylate kinase [Acidovorax ebreus TPSY]
          Length = 217

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 17/216 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEGI+GAGK++HI  L + L+   + V +TREPGGTP AE  R +LL    D
Sbjct: 1   MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVTLTREPGGTPLAEKLREMLLH---D 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117
              A  E ++  AAR DH+  VI PAL  G+++LCDRF D+++AYQG     D     ++
Sbjct: 58  SMDALTETLLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117

Query: 118 DSLQEISV---QEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + L +  V    ++M  PD T+  D+P ++  +R      L  +   D FE + V    +
Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQR------LSAARAPDRFESQPVEFFTR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + + D A   P R   +DS+   + VA  +  +V
Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207


>gi|312142724|ref|YP_003994170.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus']
 gi|311903375|gb|ADQ13816.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus']
          Length = 208

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGIEG+GK+T I LL  +L+++  +V +TREPGGT   +  R +LL    +
Sbjct: 1   MGEGFFITFEGIEGSGKSTQIKLLGDYLKKEGKEVVITREPGGTELGKKIRQLLLDPAHE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++ A R  H ++VI+PAL  GK+++ DRF DS+ AYQ       +  +  +
Sbjct: 61  DMDYRTEILLYTADRAQHFKDVIKPALKAGKVVISDRFADSNLAYQAAGRGLDYELVYKI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +  +    PD T +LD+ +  GLKR + + + L      D  ER+    H++ R+ +L+
Sbjct: 121 NDWVIDSRWPDLTFVLDVAIAEGLKRARASSFDLNG----DRLEREADSFHQRVRKAYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +   DR  +VD   + + V   + NI+
Sbjct: 177 MVKR--DRFALVDGNLAEEEVHQEVKNII 203


>gi|285017427|ref|YP_003375138.1| thymidylate kinase (dtmp kinase) protein [Xanthomonas albilineans
           GPE PC73]
 gi|283472645|emb|CBA15150.1| probable thymidylate kinase (dtmp kinase) protein [Xanthomonas
           albilineans]
          Length = 223

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 109/197 (55%), Gaps = 16/197 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDE 61
           F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE  R +LL    S   + 
Sbjct: 11  FVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDTAPSSSAEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE E ++  AAR  HV  VIRPAL  G  ++ DRF DSSYAYQGE       ++  L+
Sbjct: 71  LSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWIADLE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178
             +V  + P  T++LDL V IG  R   R  +  R ES   D+F+R         R  F 
Sbjct: 131 RRAVG-LQPGLTLLLDLDVQIGRARTSGRDLWPDRIESEQDDFFQRV--------RAGFR 181

Query: 179 DIARNQPDRCHIVDSAH 195
             A   P R  ++D++ 
Sbjct: 182 QRATQDPQRFRVIDASQ 198


>gi|58038509|ref|YP_190473.1| thymidylate kinase [Gluconobacter oxydans 621H]
 gi|81557238|sp|Q5FUU6|KTHY_GLUOX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58000923|gb|AAW59817.1| Thymidylate kinase [Gluconobacter oxydans 621H]
          Length = 214

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+ EG EGAGK+T   LL   L+ + + V +TREPGGTP AE  R++LL   VD 
Sbjct: 3   GKGLFITLEGGEGAGKSTQARLLAEALRAEGHKVLLTREPGGTPGAEEIRNLLLFGKVD- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHL-FL 117
               AE ++  AAR DH++N I PAL  G+I++CDRF DS+ AYQG    + + + L FL
Sbjct: 62  LSWRAEILMHMAARSDHLDNAILPALERGEIVVCDRFHDSTLAYQGYGIGQGAPEVLAFL 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +  +++   +  PD T++L+LP    L R++ R         D +E +    HE+    F
Sbjct: 122 NGARKLV--DFEPDLTLMLELPRPQALARLKAR-----GGQTDRYEAQAEAFHERVLAGF 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             IA   P R   VD+  + ++V+  +L  V E
Sbjct: 175 DAIASADPVRVKRVDAGQTPEAVSAALLQAVHE 207


>gi|325133815|gb|EGC56471.1| thymidylate kinase [Neisseria meningitidis M13399]
 gi|325143942|gb|EGC66252.1| thymidylate kinase [Neisseria meningitidis M01-240013]
 gi|325206485|gb|ADZ01938.1| thymidylate kinase [Neisseria meningitidis M04-240196]
          Length = 206

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS      V  +I  ++
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200


>gi|229552948|ref|ZP_04441673.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1]
 gi|229313692|gb|EEN79665.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1]
          Length = 226

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 4/209 (1%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ + +L+ +        VH+TREPGG   +E  R V+L      
Sbjct: 13  TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISEMIRDVILDPKNTA 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 73  MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+PV +GL R+      R+    D  +++ +  HE+    ++ + 
Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ---YDRLDQESLAFHERVHAAYMKLV 189

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + P R   VD+     +V T     + E
Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITE 218


>gi|169351616|ref|ZP_02868554.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552]
 gi|169291838|gb|EDS73971.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552]
          Length = 206

 Score =  128 bits (321), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 124/212 (58%), Gaps = 11/212 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG +G+GKTT   ++   L  + Y V +TREPGG   AE  R ++L        
Sbjct: 3   GKFITLEGPDGSGKTTISKIVFDQLMAEGYKVLLTREPGGIDIAEQIRAIILDKKNIAME 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AAAR  H+   I PAL +G +++CDRF+DSS  YQG    ++++ +D + +I
Sbjct: 63  ARTEALLYAAARRQHLIEKIEPALNDGYLVICDRFIDSSLVYQG---VARNIGIDEVYQI 119

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++ +V PD TI  D+P +IGL+R+   +  R++  LD  E  D   H+K  + ++ I
Sbjct: 120 NLFAIGDVFPDTTIFFDIPYEIGLERINKNH--RDTDRLD-LESND--FHKKVYEGYMSI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                DR   +D++ S   VA+ +++I+ +++
Sbjct: 175 CEKYADRITKIDASKSIDEVASQVIDIIKKII 206


>gi|319891435|ref|YP_004148310.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161131|gb|ADV04674.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03]
 gi|323465395|gb|ADX77548.1| thymidylate kinase [Staphylococcus pseudintermedius ED99]
          Length = 205

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 119/208 (57%), Gaps = 8/208 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ EG EG+GKTT +  +   L  ++YDV  TREPGG   AEA R +LL    +   A
Sbjct: 3   LFITIEGPEGSGKTTVVQAVSEQLA-QHYDVMTTREPGGVQTAEAIRQILLDG--ETMDA 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA+R +H+   + PAL +G++++CDRF+DSS AYQG         + ++ + +
Sbjct: 60  RTEALLFAASRREHLVAKVLPALSQGRLVICDRFIDSSLAYQGYARKIGVKEVQAINDFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   PD TI LD+P ++G  R+++    +     +  +++ V  HE+  + +  +    
Sbjct: 120 IEGRYPDLTIYLDIPAEVGRTRIESNRRAQ-----NRLDKESVAFHERVVEGYQQLIAQD 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P R  ++++  S + V T  L ++ + +
Sbjct: 175 PKRFAVINANQSIEQVVTAALQVILQKI 202


>gi|120612065|ref|YP_971743.1| thymidylate kinase [Acidovorax citrulli AAC00-1]
 gi|166221717|sp|A1TSN1|KTHY_ACIAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120590529|gb|ABM33969.1| thymidylate kinase [Acidovorax citrulli AAC00-1]
          Length = 221

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 17/213 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK++HI  +   L+R+   V VTREPGGTP AE  R +LL+  +D   
Sbjct: 5   GWFITFEGIDGAGKSSHIEAVAEALRREGRTVTVTREPGGTPLAETLRSLLLNEAMD--- 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E++V  A R DH+ +VI PAL+ G+++LCDRF D+++AYQG         L  L+ I
Sbjct: 62  ALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLERI 121

Query: 124 S---VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +   +QE     + P  T+  DL  D+   R++       +   D FE + V    +  Q
Sbjct: 122 TQSGLQEGTDAVLHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRVAQ 175

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + D A   P R   +D+    ++V   ++ I+
Sbjct: 176 GYADRAAADPGRFARLDADQPREAVRAQLMEIL 208


>gi|134094620|ref|YP_001099695.1| thymidylate kinase [Herminiimonas arsenicoxydans]
 gi|166221746|sp|A4G4Y1|KTHY_HERAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|133738523|emb|CAL61568.1| thymidylate kinase (dTMP kinase) [Herminiimonas arsenicoxydans]
          Length = 204

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 9/208 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+FEGI+GAGK+TH+S +   L+    +V VTREPGGT   EA R +LL    +
Sbjct: 1   MTKAKFITFEGIDGAGKSTHLSFVADLLRASKKNVVVTREPGGTSLGEALRTILLH---E 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  AAR +H+  +I PAL  G  ++ DRF D+++AYQG         L  L
Sbjct: 58  KMHLETEALLMFAARREHIAQLIEPALARGDWVISDRFTDATFAYQGGGRKLDRQKLSVL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++ D+P+D+       R  L  +  LD FE++        R  +L  
Sbjct: 118 EQWVHPHLQPDLTLLFDVPLDVA------RARLDATRTLDKFEQEQADFFAATRAEYLRR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R  I+DS  +  ++   + +I+
Sbjct: 172 AAEFPQRFRIIDSTQAIATIQEQLRDII 199


>gi|114565616|ref|YP_752770.1| dTMP kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114336551|gb|ABI67399.1| thymidylate kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 210

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 12/211 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFIS EGI+G GKT+    L ++  +  + V   REPGGT  +E  R +LL     E
Sbjct: 3   NKGLFISLEGIDGCGKTSVKEGLLQYFSK--FPVLSIREPGGTLISEKIREILLDEKNQE 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA ++AAAR   VE +IRPAL++GKI+L DR+LDS+ AYQG        FL +L 
Sbjct: 61  ITARTEAFLYAAARSQLVEELIRPALLQGKIVLADRYLDSTIAYQGYGRGLDLGFLTTLN 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++    + P  T++LD+    G +R       ++    D  E++ +    + R+ +L IA
Sbjct: 121 QLCTSGLKPHLTLLLDIDPAEGQRR-------KKKDIPDRLEKEGIEFQSRVREGYLKIA 173

Query: 182 RNQPDRCHIVDSAHSFQSV---ATNILNIVW 209
           R + +R  ++D+   F+ V   A   +  +W
Sbjct: 174 RQESERIKLLDAGKDFKEVLQEAIEYIEDIW 204


>gi|237746052|ref|ZP_04576532.1| thymidylate kinase [Oxalobacter formigenes HOxBLS]
 gi|229377403|gb|EEO27494.1| thymidylate kinase [Oxalobacter formigenes HOxBLS]
          Length = 210

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK+THI  +   L+ KN  V +TREPGGT   E  R +LL    D+  
Sbjct: 11  GRFITFEGIDGAGKSTHIDYVTGLLKAKNRQVVLTREPGGTGLGEKLREILLH---DKMT 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E EA++  AAR +H+ ++I PAL  G+ +L DRF D+S+AYQG         L  L+  
Sbjct: 68  PETEALLMFAARREHLADIIEPALRRGEWVLSDRFTDASFAYQGGGRGLAREKLRQLETW 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD T + D+  DI   R++       +   D FER+      + R  +L  A+ 
Sbjct: 128 VHPHLQPDLTFLFDVSPDIAQTRLEA------ARSPDKFEREKADFFNRVRGEYLRRAKE 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
            P+R  I+DS+    ++   +  ++ +L
Sbjct: 182 FPERFRIIDSSRPIAAIRETLKTLIGKL 209


>gi|169795088|ref|YP_001712881.1| thymidylate kinase [Acinetobacter baumannii AYE]
 gi|213158250|ref|YP_002320301.1| thymidylate kinase [Acinetobacter baumannii AB0057]
 gi|215482638|ref|YP_002324830.1| thymidylate kinase [Acinetobacter baumannii AB307-0294]
 gi|294836647|ref|ZP_06781330.1| thymidylate kinase [Acinetobacter sp. 6013113]
 gi|294860782|ref|ZP_06798551.1| thymidylate kinase [Acinetobacter sp. 6013150]
 gi|301345832|ref|ZP_07226573.1| thymidylate kinase [Acinetobacter baumannii AB056]
 gi|301512395|ref|ZP_07237632.1| thymidylate kinase [Acinetobacter baumannii AB058]
 gi|301594756|ref|ZP_07239764.1| thymidylate kinase [Acinetobacter baumannii AB059]
 gi|226732648|sp|B7GYE0|KTHY_ACIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732649|sp|B7I585|KTHY_ACIB5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487546|sp|B0VCV4|KTHY_ACIBY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169148015|emb|CAM85878.1| thymidylate kinase [Acinetobacter baumannii AYE]
 gi|213057410|gb|ACJ42312.1| thymidylate kinase [Acinetobacter baumannii AB0057]
 gi|213987116|gb|ACJ57415.1| thymidylate kinase [Acinetobacter baumannii AB307-0294]
          Length = 199

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHNENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S + L  D LQ +
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   V  MP+ T  LD P+++G+ R       RE   LD FE++ +    K R+ +  + 
Sbjct: 118 NQNFVSSMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171

Query: 182 RNQPDRCHIVDSAHS 196
           + +P+R   +D+  S
Sbjct: 172 KAEPERIKRLDATQS 186


>gi|269217490|ref|ZP_06161344.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269213111|gb|EEZ79451.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 210

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 116/212 (54%), Gaps = 16/212 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GKTT + LL  +L+ + +DV  TR+PGGT      R +LL  G  +   
Sbjct: 1   MFITFEGGDGSGKTTQMQLLAEWLRGRGFDVVTTRDPGGTELGRHIRKLLLHGG--DVSP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AEA+++AA R  +V  V+RPAL  G I+L DR++DSS AYQG   + + L  D ++ +S
Sbjct: 59  RAEALLYAADRAHNVATVVRPALERGAIVLADRYIDSSAAYQG---AGRTLGEDEVRGLS 115

Query: 125 V---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   + +MPD T+ LDLP +          + R     D  E      HE  R+ +L  A
Sbjct: 116 LWGTEGLMPDLTVFLDLPAEA--------LASRLGGSFDRIEAAGARFHEDVRRAYLRFA 167

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             +P+R   VD+    + +A  +   V E ++
Sbjct: 168 AAEPERWFTVDATVPRERIAETVRARVAEALE 199


>gi|320334977|ref|YP_004171688.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211]
 gi|319756266|gb|ADV68023.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211]
          Length = 209

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 11/206 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCG 58
           M++GLFI+FEG EGAGK+T +  L   L        +TREPGGTP     R VLL  +  
Sbjct: 1   MSAGLFITFEGPEGAGKSTQVRALTAHLAALGVPHTLTREPGGTPFGTRVRDVLLDPTLQ 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +D      E ++++A+R   V +VIRPAL  G++++CDR+ DSS AYQG         L 
Sbjct: 61  IDPL---PEFLLYSASRAQLVTDVIRPALARGEVVICDRYFDSSLAYQGGGRGLSSELLR 117

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +   +   + P  T +LDL   +GL RV  R         D  ER D+  H + R  FL
Sbjct: 118 RITHEATGGLTPHLTFLLDLDPSVGLGRVAAR------GQPDRLERADLDFHTRVRARFL 171

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           D+A  +P R  ++D+    ++++ +I
Sbjct: 172 DLAAAEPARFEVLDATRPQEALSAHI 197


>gi|229542305|ref|ZP_04431365.1| thymidylate kinase [Bacillus coagulans 36D1]
 gi|229326725|gb|EEN92400.1| thymidylate kinase [Bacillus coagulans 36D1]
          Length = 217

 Score =  127 bits (320), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+ EG EGAGKTT   ++   L+   Y V +TREPGG   AE  RH++L+    E 
Sbjct: 2   KGIFITAEGPEGAGKTTITGMIAAHLKENGYPVVLTREPGGIKIAEQIRHIILNPENTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA+R  H+   + PAL +G+I+LCDRF+DSS AYQG         +  + +
Sbjct: 62  DARTEALLYAASRRQHLAEKVLPALEQGRIVLCDRFIDSSLAYQGYARGIGIEEVYRINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T+  D+  + GL R+   ++ RE   LD    + +  H K R+ F  + +
Sbjct: 122 FATGGLLPDLTLYFDVEAETGLSRIAKNHN-REVNRLDL---EAIDFHRKVREGFQILLK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P+R H +D+    + +    L  V + +
Sbjct: 178 RFPERIHAIDANKEVEYIYHTALQKVLDAI 207


>gi|262375534|ref|ZP_06068767.1| thymidylate kinase [Acinetobacter lwoffii SH145]
 gi|262309788|gb|EEY90918.1| thymidylate kinase [Acinetobacter lwoffii SH145]
          Length = 199

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 111/205 (54%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKTT I  +      +  DV +TREPGGTP AE  R +LL+   +E  A
Sbjct: 1   MFISFEGTEGVGKTTLIRSIYEDFIAQGKDVILTREPGGTPMAEQIRSLLLAVNHEEAMA 60

Query: 65  -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H+  VI PAL  GKI+LCDRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLMYAARAQHLAQVILPALEAGKIVLCDRFSDASFAYQCAGRGLSETKLQLLNDH 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T  L+ P+++G+ R       RE   LD FE++ V   EK R  +  + + 
Sbjct: 121 FVAR-MPDITFWLEAPIELGMNRA------RERGALDRFEQEKVTFFEKVRAGYETLWQR 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+R   +D+  + + V    L+ +
Sbjct: 174 HPERIKRLDATQTPEQVFEQALSYL 198


>gi|148244374|ref|YP_001219068.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA]
 gi|166223127|sp|A5CXH6|KTHY_VESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146326201|dbj|BAF61344.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA]
          Length = 205

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ +G+EGAGK+T I  +  +L +KN +V +TREPGGT   E  R +LLS    
Sbjct: 1   MQRGKFITIDGVEGAGKSTQIDFICSYLAKKNINVVLTREPGGTKLGEKIRALLLSIDTQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++  AAR +H++  I PAL  G  +L DRF D+SYAYQG         +  L
Sbjct: 61  LMDNDTELLLIFAARNEHIKTKIIPALNRGDWVLSDRFTDASYAYQGGGRGLSIERIALL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIF 177
           ++  +Q+  PD T++LD+PV +G+ R+++R S ++   L   D+F R         R  +
Sbjct: 121 EQWVLQDFSPDVTLLLDVPVALGMLRIKSR-SRKDRIELETNDFFNRV--------RDSY 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           +  ++  P+R  ++D++ + +     I
Sbjct: 172 IKRSKQFPERIKLIDASQTLKETTQQI 198


>gi|59798343|sp|Q73FS2|KTHY_WOLPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 196

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 15/189 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    +  R   +V +TREPGGT  AE  R VLL+  +D  
Sbjct: 1   MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 61  ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 118 L-VEIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167

Query: 183 NQPDRCHIV 191
            +P RC ++
Sbjct: 168 KEPVRCSVI 176


>gi|224369769|ref|YP_002603933.1| Tmk [Desulfobacterium autotrophicum HRM2]
 gi|259494266|sp|C0QI33|KTHY_DESAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|223692486|gb|ACN15769.1| Tmk [Desulfobacterium autotrophicum HRM2]
          Length = 227

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 3/204 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEG+GKTT I  L   L +  Y+  VTREPG T   +  R +LL  G      
Sbjct: 1   MFITLEGIEGSGKTTQIKPLVDCLGQNGYEAVVTREPGATVIGKKIRAILLDPGNSGMSD 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  ++ A R  H+  VI PAL  GK ++CDRF D++  YQG         +D +  + 
Sbjct: 61  LCELFLYGADRAQHLSEVIIPALGAGKTVVCDRFTDATTVYQGAARGISKELIDIIHSVV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182
           V+++ PD TI+ DL  + GL R     +  E   LD   FER+ +  HE+ RQ +L +A 
Sbjct: 121 VKDLCPDLTILFDLDPETGLARTVKALTDGERT-LDESRFERETLEFHERVRQGYLALAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
            + DR  +VD+  + + V T I++
Sbjct: 180 AEQDRFLVVDARGTQEQVFTEIVS 203


>gi|58584408|ref|YP_197981.1| thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|75498064|sp|Q5GTD5|KTHY_WOLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58418724|gb|AAW70739.1| Thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 205

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 15/189 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKT    LL  + ++     ++ +TREPGGT  AE  R +LL   +D  
Sbjct: 1   MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLKDSIDPV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +HV+ VI PAL +GKI++CDRF+DS+ AYQG         +  L +
Sbjct: 61  ---SELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V IGL R  ++         + +E  ++  + K R+ F +IA 
Sbjct: 118 L-VKIKYPDTTFILDIDVQIGLSRAMDK---------NKYEEMNISFYNKVRKGFQEIAI 167

Query: 183 NQPDRCHIV 191
           N+PDRC I+
Sbjct: 168 NEPDRCSII 176


>gi|99034767|ref|ZP_01314692.1| hypothetical protein Wendoof_01000490 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 196

 Score =  127 bits (320), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 15/194 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    +  R   +V +TREPGGT  AE  R VLL+  +D  
Sbjct: 1   MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 61  ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 118 L-VEIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167

Query: 183 NQPDRCHIVDSAHS 196
            +P RC ++    +
Sbjct: 168 KEPVRCSVITGIET 181


>gi|307265699|ref|ZP_07547252.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919343|gb|EFN49564.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 203

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 8/205 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEGI+G GKTT I  L+ +L ++ Y++ V REPGGT   E  R +LL    +   
Sbjct: 3   GKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFIS 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++A++R   VE  I PAL +G+I++ DRF+DSSY YQG         +  + EI
Sbjct: 62  PVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNEI 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD TI +D+  +  +KR   R +       D  E++    H+K R+ ++ + + 
Sbjct: 122 ATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLEKESWEFHKKVREGYIKLVKE 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P R   +D       V  +I+++V
Sbjct: 175 FPKRFVFIDGMQELMKVHQDIIDVV 199


>gi|326389200|ref|ZP_08210768.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994563|gb|EGD52987.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
          Length = 203

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 8/205 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEGI+G GKTT I  L+ +L ++ Y++ V REPGGT   E  R +LL    +   
Sbjct: 3   GKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFIS 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++A++R   VE  I PAL +G+I++ DRF+DSSY YQG         +  + EI
Sbjct: 62  PVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNEI 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD TI +D+  +  +KR   R +       D  E++    H+K R+ ++ + + 
Sbjct: 122 ATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLEKESWGFHKKVREGYIKLVKE 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P R   +D       V  +I+++V
Sbjct: 175 FPKRFVFIDGMQELMKVHQDIIDVV 199


>gi|170017863|ref|YP_001728782.1| thymidylate kinase [Leuconostoc citreum KM20]
 gi|238688934|sp|B1MVT4|KTHY_LEUCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169804720|gb|ACA83338.1| Thymidylate kinase [Leuconostoc citreum KM20]
          Length = 214

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 122/220 (55%), Gaps = 13/220 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ +  L   L+    D  VT REPGG P +EA R +L     
Sbjct: 1   MTRPLFITFEGPEGAGKTSVLEALVSELKPILGDQLVTTREPGGNPISEAIRQILQPEDD 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++AAAR  H+   I PAL  GK+L+ DR++DSS AYQG     + L +D+
Sbjct: 61  NGMDDRTEALLYAAARRQHIVETILPALSAGKVLISDRYVDSSLAYQG---GGRDLGVDN 117

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175
           + +I   ++  ++PD TI  D+P ++GL RV  NR        +D  +++ +  H++ R 
Sbjct: 118 IWQINQFAIDGLLPDLTIYFDVPSELGLSRVMANR-----QGKIDRLDKESLSFHQRVRT 172

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +L++  +  DR  I+D+      V ++   ++ E +  R
Sbjct: 173 TYLELQHDFSDRIKIIDATQPLTDVISDTRALLQEALNSR 212


>gi|42521048|ref|NP_966963.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410789|gb|AAS14897.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 212

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 15/194 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    +  R   +V +TREPGGT  AE  R VLL+  +D  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 77  ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 L-VEIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIVDSAHS 196
            +P RC ++    +
Sbjct: 184 KEPVRCSVITGIET 197


>gi|326316632|ref|YP_004234304.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373468|gb|ADX45737.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 221

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 17/213 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK++HI  +   L+R    V VTREPGGTP AE  R +LL+  +D   
Sbjct: 5   GWFITFEGIDGAGKSSHIEAVAEALRRGGRTVTVTREPGGTPLAETLRALLLNEAMD--- 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E++V  A R DH+ +VI PAL+ G+++LCDRF D+++AYQG         L  L+ I
Sbjct: 62  ALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLERI 121

Query: 124 S---VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +   +QE     + P  T+  DL  D+   R++       +   D FE + V    +  Q
Sbjct: 122 TQSGLQEGSDAILHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRVAQ 175

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + D A   P R   +D+    ++V   +++I+
Sbjct: 176 GYADRAAADPGRFARLDADQPREAVRAQLMDIL 208


>gi|257091001|ref|ZP_05585362.1| thymidylate kinase [Enterococcus faecalis CH188]
 gi|312902587|ref|ZP_07761793.1| thymidylate kinase [Enterococcus faecalis TX0635]
 gi|256999813|gb|EEU86333.1| thymidylate kinase [Enterococcus faecalis CH188]
 gi|310634257|gb|EFQ17540.1| thymidylate kinase [Enterococcus faecalis TX0635]
 gi|315162072|gb|EFU06089.1| thymidylate kinase [Enterococcus faecalis TX0645]
 gi|315579603|gb|EFU91794.1| thymidylate kinase [Enterococcus faecalis TX0630]
          Length = 212

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 113/209 (54%), Gaps = 7/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG +GAGKT+ +  + +R  +     +  TREPGG P AE  R V+L    D  
Sbjct: 3   GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG       + + S+  
Sbjct: 63  DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIVPIASINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + V PD TI LD+  D GL+R+Q NR     +  +D  + + +  H++ R  +L +A
Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|20806623|ref|NP_621794.1| thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
 gi|23821773|sp|Q8RDE6|KTHY_THETN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|20515069|gb|AAM23398.1| Thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
          Length = 208

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 14/213 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEGI+G GKTT + LL+  L+++ YD+ V REPGGT   E  R +LL      F 
Sbjct: 3   GKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLDRENLIFP 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-- 121
              E +++A++R   VE  I PAL +G++++ DRF+DSSY YQG    ++ L L+ ++  
Sbjct: 63  V-TEMLLYASSRAQLVEEKILPALSKGQMVIVDRFIDSSYVYQG---YARGLGLEKVKIV 118

Query: 122 -EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            EI+ + + PD T+ +D+  +  +KR Q + +       D  E +D   H+K R+ +L +
Sbjct: 119 NEIATKGLFPDITVYIDITPEEAIKRRQGKKA-------DRLEGEDYEFHKKVREGYLRL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            ++ P+R  ++D      +V   ++  V E ++
Sbjct: 172 VKDFPERFILIDGMQEVLAVHKMVVKAVEEYLK 204


>gi|225677081|ref|ZP_03788085.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590877|gb|EEH12100.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 212

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 15/194 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    +  R   +V +TREPGGT  AE  R VLL+  +D  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 77  ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIGDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 L-VEIECPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIVDSAHS 196
            +P RC ++    +
Sbjct: 184 KEPVRCSVITGIET 197


>gi|162446997|ref|YP_001620129.1| thymidylate kinase [Acholeplasma laidlawii PG-8A]
 gi|189028826|sp|A9NEH3|KTHY_ACHLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|161985104|gb|ABX80753.1| thymidylate kinase [Acholeplasma laidlawii PG-8A]
          Length = 201

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 13/206 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG+GKTT I  LK  L  K YDV  TREPGG+  AE  R VLL     E  A
Sbjct: 1   MFITFEGGEGSGKTTLIEKLKHTLLEKKYDVLTTREPGGSKVAEKIRSVLLDNKNTEITA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA+R  H++ VI P L   K++LCDR++DSSYAYQ    +    F+ S+   +
Sbjct: 61  HTEALLFAASRAQHLDEVIIPNL--DKVILCDRYIDSSYAYQAFGRNLGMEFVQSINSYA 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  +PD T  +DL    G+ RV +NR  L ++  LD   +     H+K R+ ++ I+  
Sbjct: 119 LK-YLPDLTFYIDLDPKTGIDRVKKNR--LHKTDRLDMEVQ---TFHQKVREGYIRISEM 172

Query: 184 QPDRCHIVDSAHS----FQSVATNIL 205
             +R  ++D   S    +Q +  NIL
Sbjct: 173 FKERIVVIDGNQSIDAIYQIIMDNIL 198


>gi|254462931|ref|ZP_05076347.1| thymidylate kinase [Rhodobacterales bacterium HTCC2083]
 gi|206679520|gb|EDZ44007.1| thymidylate kinase [Rhodobacteraceae bacterium HTCC2083]
          Length = 209

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 6/206 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FISFEGI+G+GK+T    L   L+   ++V +TREPGG+  AE  R ++L    D +
Sbjct: 5   TGRFISFEGIDGSGKSTQAKRLAAALEADGFEVVLTREPGGSAGAEEIRALVLQGEPDRW 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  
Sbjct: 65  SAETEILLFTAARRDHMERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRALVDQLHA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T++ D+  D+   R   R S+        FE     + +  R  FL++A 
Sbjct: 125 LMIGR-EPDLTLLFDMDPDVSHARAVERDSIDS-----RFENFGASLQKAMRSGFLELAA 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R  IV++A    ++A + L+++
Sbjct: 179 AAPKRFRIVNAARDIDAIAADTLSVI 204


>gi|261403890|ref|YP_003240131.1| thymidylate kinase [Paenibacillus sp. Y412MC10]
 gi|261280353|gb|ACX62324.1| thymidylate kinase [Paenibacillus sp. Y412MC10]
          Length = 214

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ EG EG+GKTT +  L  F+Q  +    +TREPGG   AE  R ++L        A
Sbjct: 7   LFITVEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIDIAEKIRSIILDPEHTAMDA 66

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AAAR  H+   + PAL +G  +LCDRF+DSS  YQG         + S+ + +
Sbjct: 67  RTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVWSINQFA 126

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++ D+   IGL R+      RE   LD    +++  HEK R+ +L +A   
Sbjct: 127 IDTRMPDLTLLFDIEPRIGLSRIAANAE-REWNRLDM---ENLTFHEKVREGYLLVAERN 182

Query: 185 PDRCHIVDSAHS 196
           PDR  IVD++ +
Sbjct: 183 PDRIRIVDASKT 194


>gi|32034665|ref|ZP_00134803.1| COG0125: Thymidylate kinase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209279|ref|YP_001054504.1| thymidylate kinase [Actinobacillus pleuropneumoniae L20]
 gi|165977254|ref|YP_001652847.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|190151172|ref|YP_001969697.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|303252694|ref|ZP_07338856.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|307246746|ref|ZP_07528815.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307248888|ref|ZP_07530899.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|307255731|ref|ZP_07537534.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307257916|ref|ZP_07539670.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|307260183|ref|ZP_07541892.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|307262310|ref|ZP_07543958.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|307264521|ref|ZP_07546105.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|229487547|sp|A3N3B3|KTHY_ACTP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687523|sp|B0BSY9|KTHY_ACTPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238692362|sp|B3GZ69|KTHY_ACTP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|126098071|gb|ABN74899.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
 gi|165877355|gb|ABY70403.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|189916303|gb|ACE62555.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|302648433|gb|EFL78627.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|306852352|gb|EFM84588.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306854583|gb|EFM86775.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|306861291|gb|EFM93282.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306863563|gb|EFM95492.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306865728|gb|EFM97607.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|306867973|gb|EFM99801.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306870120|gb|EFN01880.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 208

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 13/208 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGKTT   ++   L++   +V  TREPGGTP AE  RH++     +   
Sbjct: 3   GKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQTREPGGTPLAEKLRHLIKHETEEAVS 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
            +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQ G R   +HL L++L+E
Sbjct: 63  DKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHL-LETLKE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
             +    PD TI LD+   +GL R + R  L   E   LD+F R         RQ +L++
Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGRGELDRIEQQSLDFFYRT--------RQRYLEL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +N  ++  I+++  S + VA +I   V
Sbjct: 174 TQNN-EKAVIINAEQSIEQVAADIQQAV 200


>gi|320526760|ref|ZP_08027950.1| thymidylate kinase [Solobacterium moorei F0204]
 gi|320132728|gb|EFW25268.1| thymidylate kinase [Solobacterium moorei F0204]
          Length = 211

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 117/215 (54%), Gaps = 11/215 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+FEG +G+GKTT  + +   L+   Y V  TREPGG+  AE  RHV+L     
Sbjct: 1   MKTGLFITFEGPDGSGKTTVSTAVTNMLEADGYQVRYTREPGGSNIAEQIRHVILDPKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  EA+++AA+R  H+ + + P L +G  ++ DRF+DSS AYQG     + + +D +
Sbjct: 61  EMDARTEALLYAASRRQHLIDKVLPVLEQGVHVISDRFVDSSLAYQG---CGREIGMDEV 117

Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            EI   +++  MPD TI L +  + GLKR+      +    LD  +++ V  H++  + +
Sbjct: 118 YEINQFAIENHMPDKTIFLQIDAETGLKRIH-----KGREVLDRLDQESVEFHQRVHEGY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +     DR  IVD+     +V      IV  L+
Sbjct: 173 QKVIEKYADRMIIVDATADVDTVIQKSYEIVKGLL 207


>gi|254479299|ref|ZP_05092640.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
 gi|214034774|gb|EEB75507.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
          Length = 208

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 14/213 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEGI+G GKTT + LL+  L+++ YD+ V REPGGT   E  R +LL      F 
Sbjct: 3   GKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLDRENLIFP 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-- 121
              E +++A++R   VE  I PAL +G++++ DRF+DSSY YQG    ++ L L+ ++  
Sbjct: 63  V-TEMLLYASSRAQLVEEKILPALSKGQMVIVDRFVDSSYVYQG---YARGLGLEKVKIV 118

Query: 122 -EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            EI+ + + PD T+ +D+  +  +KR Q + +       D  E +D   H+K R+ +L +
Sbjct: 119 NEIATKGLFPDITVYIDITPEEAIKRRQGKKA-------DRLEGEDYEFHKKVREGYLRL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            ++ P+R  ++D      +V   ++  V E ++
Sbjct: 172 VKDFPERFVLIDGMQEVLAVHKMVVKAVEEYLK 204


>gi|11991874|gb|AAG42374.1|AF294440_6 thymidylate kinase [Xanthomonas albilineans]
          Length = 226

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 19/200 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-------SCG 58
           F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE  R +LL          
Sbjct: 11  FVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDMAPSSPETA 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           V+   AE E ++  AAR  HV  VIRPAL  G  ++ DRF DSSYAYQGE       ++ 
Sbjct: 71  VERLSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWIA 130

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQ 175
            L+  +V  + P  T++LDL V IG  R   R  +  R ES   D+F+R         R 
Sbjct: 131 DLERRAVG-LQPGLTLLLDLDVQIGRARTSGRDLWPDRIESEQDDFFQRV--------RA 181

Query: 176 IFLDIARNQPDRCHIVDSAH 195
            F   A   P R  ++D++ 
Sbjct: 182 GFRQRATQDPQRFRVIDASQ 201


>gi|296116333|ref|ZP_06834949.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977152|gb|EFG83914.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769]
          Length = 224

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 118/218 (54%), Gaps = 17/218 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +GLFI+FEG EGAGK+T + LL+  L     +  +  TREPGGTP AEA R  LL  G  
Sbjct: 10  TGLFITFEGGEGAGKSTQVRLLQEHLATIMPSDRIVRTREPGGTPGAEAVRDFLL-FGEH 68

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119
           +    AE ++   AR DHV+ +IRPAL  GK+++ DRF DS+ AYQG  R       LD 
Sbjct: 69  DLSLRAETLMHFGARYDHVDRLIRPALEAGKVVISDRFTDSTAAYQGYGRGMGDPAILDL 128

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  +  Q    PD T ILD+P  +  +R++ R +       D +E      H +  + F 
Sbjct: 129 IASLRQQTGARPDMTFILDVPRAMARERLRARGNR-----PDRYETAAEAFHARVAEGFA 183

Query: 179 DIARNQPDRCHIVDSAHS----FQSVATNI---LNIVW 209
            IAR +P RC  +D+A       Q+VA ++   L + W
Sbjct: 184 AIARQEPGRCITLDAAQPPDIVAQAVARHVATRLPMSW 221


>gi|239998426|ref|ZP_04718350.1| thymidylate kinase [Neisseria gonorrhoeae 35/02]
 gi|268594287|ref|ZP_06128454.1| thymidylate kinase [Neisseria gonorrhoeae 35/02]
 gi|268547676|gb|EEZ43094.1| thymidylate kinase [Neisseria gonorrhoeae 35/02]
 gi|317163711|gb|ADV07252.1| thymidylate kinase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 206

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+G GK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGVGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---AREK---DRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  S   V  +I  ++
Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200


>gi|157956091|gb|ABW06433.1| thymidylate kinase [Wheat blue dwarf phytoplasma]
          Length = 207

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 7/210 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EGAGKTTH   L   L +K Y   +T+EPGGT   E  R++LL     +   
Sbjct: 1   MFISFEGCEGAGKTTHSRYLFEKLSKK-YSCVLTKEPGGTLFNEVIRNILLHSSNKQIDF 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA R +H+  +I PAL + KI++CDR+LDS+ AYQG        F+ ++   +
Sbjct: 60  HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQGYARGLSQDFVLNINNFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IARN 183
           +   MP+ T  LDL   IG++RV+ ++  +E   ++ F+ + +  H+K R+ +LD + ++
Sbjct: 120 I-NYMPNITFYLDLDPKIGIQRVK-QFRPKE---INSFDLQKLSFHKKVRKGYLDLLQKD 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           Q  R  ++D++   + +   I   + E+ Q
Sbjct: 175 QQKRIFLIDASKRLEVIYNIIEQKLKEVFQ 204


>gi|118444724|ref|YP_879227.1| thymidylate kinase [Clostridium novyi NT]
 gi|171472994|sp|A0Q3M5|KTHY_CLONN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118135180|gb|ABK62224.1| thymidylate kinase [Clostridium novyi NT]
          Length = 205

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 118/203 (58%), Gaps = 10/203 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G FI+ EG EG+GKTT + +++++L   N +   TREPGG   +E  R V+L+    
Sbjct: 1   MNKGAFITLEGPEGSGKTTIVKMIEKYLSENNIEYISTREPGGINISEQIRDVILNKDNV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
              A  EA+++ A+R  H+   + PA+ EGK+++CDRF+DSS AYQG    ++ + +D  
Sbjct: 61  AMDARTEALLYVASRRQHLAERVIPAIKEGKVVICDRFIDSSLAYQG---YARGIGIDEV 117

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            ++ E ++   MPD T+ LD+  ++GLKR+ ++ + RE   LD  E  D   H+K R+ +
Sbjct: 118 MAINEFAIDGYMPDLTLYLDIEPEVGLKRI-SKNNEREVNRLD-LEALD--FHKKVREGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSV 200
             +    P+R   +++      V
Sbjct: 174 FKLLEKYPNRIKKINANQPVDKV 196


>gi|325203757|gb|ADY99210.1| thymidylate kinase [Neisseria meningitidis M01-240355]
          Length = 206

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  E  R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  +   V  +I  ++
Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200


>gi|295698602|ref|YP_003603257.1| thymidylate kinase [Candidatus Riesia pediculicola USDA]
 gi|291157415|gb|ADD79860.1| thymidylate kinase [Candidatus Riesia pediculicola USDA]
          Length = 217

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 6/200 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G +I  EG+EG+GKTT I  +K+ L ++ +D+   REPGGTP +E  R ++     +E
Sbjct: 6   NFGRYIVVEGLEGSGKTTMIGFVKKMLIKEGFDILTVREPGGTPISEKIRKLIKKNFPEE 65

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F  + E  +F AAR+  +EN+I P L  GK ++ DR   SSYAYQG +   +   +D +
Sbjct: 66  KFLVKTELFMFYAARIQLMENIILPNLKSGKWVIGDRNFLSSYAYQGGKYGVKDDEIDKI 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I++ +  PD  I LD+  +IG+ R+      R+S+ LD  E++ +    + R  +L+I
Sbjct: 126 NKIAIGKFQPDLIIYLDVFPEIGISRIHE----RKSSKLDRIEKRSLDFFHQVRNRYLNI 181

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
            +NQ +   I+D+     SV
Sbjct: 182 IKNQKE-FMIIDANQDLSSV 200


>gi|170780642|ref|YP_001708974.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus]
 gi|189028830|sp|B0RAE3|KTHY_CLAMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169155210|emb|CAQ00311.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 211

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 12/205 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+FI+ EG +G GK+T  +LL+ +L+ + ++V VTREPGG+   +  R ++L       
Sbjct: 2   TGVFITLEGGDGVGKSTQSALLREWLEEQGHEVVVTREPGGSDLGQEIREIVLHR-RGHI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R  HVE V+RPAL  G ++L DR+LDSS AYQG         +  L  
Sbjct: 61  APRAEALLYAADRAHHVETVVRPALERGAVVLQDRYLDSSVAYQGAGRVLDAAEIRDLSL 120

Query: 123 ISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            + Q ++PD T++LDL      I L   + R+   E+      ER D   HE+ RQ FL 
Sbjct: 121 WAAQGLLPDLTVLLDLDQAAARIRLDAARTRFDRLEA------ERAD--FHERVRQAFLG 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A  +P+R  +VD+    + +A  I
Sbjct: 173 LAAAEPERFLVVDAGWPREVIAAEI 197


>gi|212716794|ref|ZP_03324922.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660498|gb|EEB21073.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM
           16992]
          Length = 217

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 19/220 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+FISFEGI+G GKTT +  L+ +++ +  +  VTREPGGT    A R +LL  GV+   
Sbjct: 3   GIFISFEGIDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLG-GVEGSD 61

Query: 61  -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV  VIRPAL  G +++ DR+LDSS AYQ      + L    
Sbjct: 62  ADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQA---GGRELTAGE 118

Query: 120 LQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++++S+    E++P+ T +LDL       R+Q+     ESA  D+  R         RQ 
Sbjct: 119 IRDLSMWATCELLPNRTYLLDLDPVQSHARLQHDEDRMESAGNDFQRRT--------RQA 170

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           FLD+A+ +  R  ++D++ S   V ++I +   ++ Q + 
Sbjct: 171 FLDLAKAESQRFRVIDASQSIDEVWSHIQDDFAQISQTKT 210


>gi|88856427|ref|ZP_01131085.1| thymidylate kinase [marine actinobacterium PHSC20C1]
 gi|88814294|gb|EAR24158.1| thymidylate kinase [marine actinobacterium PHSC20C1]
          Length = 209

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 18/207 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +GAGKTT   LL  +L+   + V VTREPGGT      R ++L    D   
Sbjct: 3   GLFITLEGGDGAGKTTQSKLLVHWLEEAGHTVVVTREPGGTDLGVELREIVLHRRGD-MD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  H+  V+RPAL  G I++ DR++DSS AYQG   + + L  + ++++
Sbjct: 62  PRAEALIYAADRAHHIATVVRPALERGDIVVQDRYIDSSEAYQG---AGRVLGAEEVRDL 118

Query: 124 SV---QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           S+   Q ++PD T++LDL    G KR+   + RY        D  E +    H + R  F
Sbjct: 119 SLWATQSLLPDVTVLLDLDPTDGRKRLDSARTRY--------DRLEAEKQEFHTRVRDAF 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L+ A  +PDR  +VD+A     +A  I
Sbjct: 171 LERAAKEPDRILVVDAARDVAEIAAAI 197


>gi|256833407|ref|YP_003162134.1| thymidylate kinase [Jonesia denitrificans DSM 20603]
 gi|256686938|gb|ACV09831.1| thymidylate kinase [Jonesia denitrificans DSM 20603]
          Length = 221

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 117/217 (53%), Gaps = 11/217 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++GLF++FEG +G+GKTT   L  ++L     +D  +TREPGGT   +  R +LL    D
Sbjct: 8   HAGLFLTFEGGDGSGKTTQARLAAQWLSDTYAHDALLTREPGGTELGQHIRQLLLHG--D 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + G  AEA+++AA R  HV  VIRPAL  G+ ++CDR+ DSS AYQG   +     +  L
Sbjct: 66  DMGPRAEALLYAADRSHHVHTVIRPALSLGRTVVCDRYFDSSIAYQGGGRTLTPKTIRDL 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V  ++PD T+++D+P  +G  R       RE    D  ER     H+     +  +
Sbjct: 126 SLWAVDGLIPDLTVLIDVPARVGAAR-------REGEP-DRLERAGDDFHDTTHATYRHL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A  +P+R  IVD   +   VA  +   + + +  RV+
Sbjct: 178 AEQEPERWVIVDGIGTIDEVAGRVRAALVDRLGARVT 214


>gi|163847788|ref|YP_001635832.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222525656|ref|YP_002570127.1| dTMP kinase [Chloroflexus sp. Y-400-fl]
 gi|163669077|gb|ABY35443.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222449535|gb|ACM53801.1| dTMP kinase [Chloroflexus sp. Y-400-fl]
          Length = 226

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 12/230 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T    L   LQ   Y   +TREPGGT  +E  R +L+     
Sbjct: 1   MKQGFFITFEGPEGAGKSTQARRLYERLQSIGYPTILTREPGGTRISELIRRILVDLRHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++F+AAR   V  +IRP L  G I++CDR+ DS++AYQG         L ++
Sbjct: 61  EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRTI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDVMIHEKRRQ 175
            +I+   + PD T+ L + V++GL+R +      E   +     +  + +D+  H++  Q
Sbjct: 121 TDIATGGLKPDLTLYLRIDVEVGLQRKRASRERIEPGSVQPPEWNRLDARDLAYHQRVAQ 180

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR---VSPLSSK 222
            F ++   +P+R + +D+      +A  I    W++V  R   V PL+++
Sbjct: 181 GFNELMAQEPERWYALDADQPVDELAEQI----WQVVMARLAQVMPLAAQ 226


>gi|323140332|ref|ZP_08075264.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067]
 gi|322415190|gb|EFY05977.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067]
          Length = 211

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGKTT   L  + L+ + YDV  +REPGGT  AE  R ++L   +    
Sbjct: 3   GFFITFEGIDGAGKTTQQHLAAQALREQGYDVLESREPGGTQLAEKVRALVLDPELP-LT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSL 120
              + +++ AAR +HV+ ++RPAL  GKI++CDRF DS+  YQG    +   +   L  L
Sbjct: 62  TATQTLLYLAARSEHVDKLLRPALEAGKIIICDRFNDSTLVYQGLAQGKAPEEIAQLRRL 121

Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
              +   + PD T++ D  P ++ L R Q R         D +E++ +   ++ R  FL 
Sbjct: 122 GAFATGGLEPDLTLVFDADPAEL-LARRQQR------GVQDRYEQQGLEFQQRLRAGFLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A  +P R  ++D+  + Q V   +L ++  ++
Sbjct: 175 LAEAEPQRLQVIDALGTQQEVTAKVLQVIGRVI 207


>gi|29840268|ref|NP_829374.1| thymidylate kinase [Chlamydophila caviae GPIC]
 gi|34222665|sp|Q823B7|KTHY_CHLCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|29834616|gb|AAP05252.1| thymidylate kinase [Chlamydophila caviae GPIC]
          Length = 207

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +   V  TREPGG+P  E  R ++L         
Sbjct: 1   MFIVIEGCEGSGKSSLTELLKDRLIAEGKAVVATREPGGSPLGERVRDLILEPSTPSISP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
             E  +F AAR +H+   I PAL  G I++CDRF DS+  YQG  +     ++ SL    
Sbjct: 61  YTELFLFLAARAEHITKKIFPALESGNIVICDRFHDSTIVYQGIAEGLGKEYVTSLCHHV 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  ++ +PD T +LD+P D GL+R Q + S      LD FE K +  H K R+ FL +A 
Sbjct: 121 VGEKKFLPDLTCLLDIPADEGLRRKQQQKS------LDKFEDKPLAYHTKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P+   I+D     +     ++    EL
Sbjct: 175 AHPNSYLILDGRQPLEESLNKVMTAYTEL 203


>gi|254361189|ref|ZP_04977333.1| dTMP kinase [Mannheimia haemolytica PHL213]
 gi|261492947|ref|ZP_05989492.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261495090|ref|ZP_05991556.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153092680|gb|EDN73729.1| dTMP kinase [Mannheimia haemolytica PHL213]
 gi|261309256|gb|EEY10493.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311399|gb|EEY12557.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 206

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 119/209 (56%), Gaps = 14/209 (6%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGKTT H  +LK   Q    DV +TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGTPLAEKLRHLIKHETEEAI 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
             +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQ G R   +HL L++L+
Sbjct: 63  NDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRKLDRHL-LETLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           E  +    PD TI LDL   IGL+R + R  L   E   LD+F R         R+ +L+
Sbjct: 122 ESVLGTFEPDLTIYLDLDPVIGLERARGRGELDRIEQQSLDFFYRT--------RERYLE 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + ++  D+  I+++    + V  +I  ++
Sbjct: 174 LTQHN-DKAVIINAEQPIEQVTADIQQVI 201


>gi|330444525|ref|YP_004377511.1| thymidylate kinase [Chlamydophila pecorum E58]
 gi|328807635|gb|AEB41808.1| thymidylate kinase [Chlamydophila pecorum E58]
          Length = 206

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 10/205 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT+   +L + L  +   + +TREPGG P  E  R ++L     +   
Sbjct: 1   MFIVLEGGEGAGKTSLAEMLHQKLVSEGRSIVMTREPGGCPLGERIRELILQASETKVSQ 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
             E  +F A R  H++  I PAL  G I+LC+RF DS+  YQG  +     F+  L  Q 
Sbjct: 61  YTELFLFLATRAQHIQETIIPALERGDIVLCERFHDSTIVYQGIAEGLGMSFVSDLCYQA 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           I  +  +PD  ++LD+P +IGL R VQ +        LD FE+  +  HE  R  FL +A
Sbjct: 121 IGPKPFLPDLVVLLDVPAEIGLSRKVQQK-------TLDKFEKNPLSYHEAIRSGFLALA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
              PDR  I+D+  S +     +L 
Sbjct: 174 NANPDRYLILDARQSLEESVKKVLQ 198


>gi|29377238|ref|NP_816392.1| thymidylate kinase [Enterococcus faecalis V583]
 gi|227554247|ref|ZP_03984294.1| thymidylate kinase [Enterococcus faecalis HH22]
 gi|229549121|ref|ZP_04437846.1| thymidylate kinase [Enterococcus faecalis ATCC 29200]
 gi|255971839|ref|ZP_05422425.1| thymidylate kinase [Enterococcus faecalis T1]
 gi|255974836|ref|ZP_05425422.1| thymidylate kinase [Enterococcus faecalis T2]
 gi|256763385|ref|ZP_05503965.1| thymidylate kinase [Enterococcus faecalis T3]
 gi|256854059|ref|ZP_05559424.1| thymidylate kinase [Enterococcus faecalis T8]
 gi|256957990|ref|ZP_05562161.1| thymidylate kinase [Enterococcus faecalis DS5]
 gi|256960991|ref|ZP_05565162.1| thymidylate kinase [Enterococcus faecalis Merz96]
 gi|256963867|ref|ZP_05568038.1| thymidylate kinase [Enterococcus faecalis HIP11704]
 gi|257079927|ref|ZP_05574288.1| thymidylate kinase [Enterococcus faecalis JH1]
 gi|257081675|ref|ZP_05576036.1| thymidylate kinase [Enterococcus faecalis E1Sol]
 gi|257084272|ref|ZP_05578633.1| thymidylate kinase [Enterococcus faecalis Fly1]
 gi|257087729|ref|ZP_05582090.1| thymidylate kinase [Enterococcus faecalis D6]
 gi|257416932|ref|ZP_05593926.1| thymidylate kinase [Enterococcus faecalis AR01/DG]
 gi|257420151|ref|ZP_05597145.1| thymidylate kinase [Enterococcus faecalis T11]
 gi|257421627|ref|ZP_05598617.1| thymidylate kinase [Enterococcus faecalis X98]
 gi|293384623|ref|ZP_06630488.1| dTMP kinase [Enterococcus faecalis R712]
 gi|293386762|ref|ZP_06631333.1| dTMP kinase [Enterococcus faecalis S613]
 gi|294779714|ref|ZP_06745102.1| dTMP kinase [Enterococcus faecalis PC1.1]
 gi|300860317|ref|ZP_07106404.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11]
 gi|307269207|ref|ZP_07550561.1| thymidylate kinase [Enterococcus faecalis TX4248]
 gi|307271815|ref|ZP_07553086.1| thymidylate kinase [Enterococcus faecalis TX0855]
 gi|307277000|ref|ZP_07558110.1| thymidylate kinase [Enterococcus faecalis TX2134]
 gi|307278693|ref|ZP_07559761.1| thymidylate kinase [Enterococcus faecalis TX0860]
 gi|307290232|ref|ZP_07570148.1| thymidylate kinase [Enterococcus faecalis TX0411]
 gi|312900123|ref|ZP_07759439.1| thymidylate kinase [Enterococcus faecalis TX0470]
 gi|312906447|ref|ZP_07765455.1| thymidylate kinase [Enterococcus faecalis DAPTO 512]
 gi|312951938|ref|ZP_07770826.1| thymidylate kinase [Enterococcus faecalis TX0102]
 gi|312979395|ref|ZP_07791083.1| thymidylate kinase [Enterococcus faecalis DAPTO 516]
 gi|46576515|sp|Q830L6|KTHY_ENTFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|29344704|gb|AAO82462.1| thymidylate kinase [Enterococcus faecalis V583]
 gi|227176607|gb|EEI57579.1| thymidylate kinase [Enterococcus faecalis HH22]
 gi|229305746|gb|EEN71742.1| thymidylate kinase [Enterococcus faecalis ATCC 29200]
 gi|255962857|gb|EET95333.1| thymidylate kinase [Enterococcus faecalis T1]
 gi|255967708|gb|EET98330.1| thymidylate kinase [Enterococcus faecalis T2]
 gi|256684636|gb|EEU24331.1| thymidylate kinase [Enterococcus faecalis T3]
 gi|256711002|gb|EEU26045.1| thymidylate kinase [Enterococcus faecalis T8]
 gi|256948486|gb|EEU65118.1| thymidylate kinase [Enterococcus faecalis DS5]
 gi|256951487|gb|EEU68119.1| thymidylate kinase [Enterococcus faecalis Merz96]
 gi|256954363|gb|EEU70995.1| thymidylate kinase [Enterococcus faecalis HIP11704]
 gi|256987957|gb|EEU75259.1| thymidylate kinase [Enterococcus faecalis JH1]
 gi|256989705|gb|EEU77007.1| thymidylate kinase [Enterococcus faecalis E1Sol]
 gi|256992302|gb|EEU79604.1| thymidylate kinase [Enterococcus faecalis Fly1]
 gi|256995759|gb|EEU83061.1| thymidylate kinase [Enterococcus faecalis D6]
 gi|257158760|gb|EEU88720.1| thymidylate kinase [Enterococcus faecalis ARO1/DG]
 gi|257161979|gb|EEU91939.1| thymidylate kinase [Enterococcus faecalis T11]
 gi|257163451|gb|EEU93411.1| thymidylate kinase [Enterococcus faecalis X98]
 gi|291078081|gb|EFE15445.1| dTMP kinase [Enterococcus faecalis R712]
 gi|291083765|gb|EFE20728.1| dTMP kinase [Enterococcus faecalis S613]
 gi|294453205|gb|EFG21619.1| dTMP kinase [Enterococcus faecalis PC1.1]
 gi|300849356|gb|EFK77106.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11]
 gi|306498653|gb|EFM68154.1| thymidylate kinase [Enterococcus faecalis TX0411]
 gi|306504633|gb|EFM73835.1| thymidylate kinase [Enterococcus faecalis TX0860]
 gi|306506423|gb|EFM75583.1| thymidylate kinase [Enterococcus faecalis TX2134]
 gi|306511693|gb|EFM80692.1| thymidylate kinase [Enterococcus faecalis TX0855]
 gi|306514426|gb|EFM82987.1| thymidylate kinase [Enterococcus faecalis TX4248]
 gi|310627601|gb|EFQ10884.1| thymidylate kinase [Enterococcus faecalis DAPTO 512]
 gi|310630127|gb|EFQ13410.1| thymidylate kinase [Enterococcus faecalis TX0102]
 gi|311287766|gb|EFQ66322.1| thymidylate kinase [Enterococcus faecalis DAPTO 516]
 gi|311292758|gb|EFQ71314.1| thymidylate kinase [Enterococcus faecalis TX0470]
 gi|315025470|gb|EFT37402.1| thymidylate kinase [Enterococcus faecalis TX2137]
 gi|315030416|gb|EFT42348.1| thymidylate kinase [Enterococcus faecalis TX4000]
 gi|315035135|gb|EFT47067.1| thymidylate kinase [Enterococcus faecalis TX0027]
 gi|315148725|gb|EFT92741.1| thymidylate kinase [Enterococcus faecalis TX4244]
 gi|315151798|gb|EFT95814.1| thymidylate kinase [Enterococcus faecalis TX0012]
 gi|315154273|gb|EFT98289.1| thymidylate kinase [Enterococcus faecalis TX0031]
 gi|315155624|gb|EFT99640.1| thymidylate kinase [Enterococcus faecalis TX0043]
 gi|315159635|gb|EFU03652.1| thymidylate kinase [Enterococcus faecalis TX0312]
 gi|315168745|gb|EFU12762.1| thymidylate kinase [Enterococcus faecalis TX1341]
 gi|315170439|gb|EFU14456.1| thymidylate kinase [Enterococcus faecalis TX1342]
 gi|315173504|gb|EFU17521.1| thymidylate kinase [Enterococcus faecalis TX1346]
 gi|315573802|gb|EFU85993.1| thymidylate kinase [Enterococcus faecalis TX0309B]
 gi|315580314|gb|EFU92505.1| thymidylate kinase [Enterococcus faecalis TX0309A]
 gi|323481685|gb|ADX81124.1| thymidylate kinase [Enterococcus faecalis 62]
 gi|327535978|gb|AEA94812.1| thymidylate kinase [Enterococcus faecalis OG1RF]
 gi|329572901|gb|EGG54522.1| dTMP kinase [Enterococcus faecalis TX1467]
          Length = 212

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 7/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG +GAGKT+ +  + +R  +     +  TREPGG P AE  R V+L    D  
Sbjct: 3   GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+  
Sbjct: 63  DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + V PD TI LD+  D GL+R+Q NR     +  +D  + + +  H++ R  +L +A
Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|314937311|ref|ZP_07844653.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80]
 gi|313654607|gb|EFS18357.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80]
          Length = 205

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT ++ + + L  +NY+V  TREPGG    E  R++LL    +     
Sbjct: 4   FITFEGPEGSGKTTVLNQINKLLS-ENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   K++LCDR++DSS AYQG         +  + E ++
Sbjct: 61  TEALLFAASRREHLVEKVIPALKNDKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++ +  H+K  + +  + +  P
Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R  +VD+  S +SV ++   I+   ++
Sbjct: 176 ERFKVVDATQSIESVISDTYEIILSYLK 203


>gi|298369193|ref|ZP_06980511.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283196|gb|EFI24683.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 211

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K++ + +   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVMKQWFEARRLPVLFTREPGGTPTGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E+VI PAL  G  ++ DRF D+++AYQG         +++L+    
Sbjct: 64  TETLLMFAARQQHLEDVILPALKNGIHVVSDRFTDATFAYQGGGRGVPLQDIETLENWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T++LD+P+++ L+R+     +RE    D FER+      + R  +   A   P
Sbjct: 124 GSFRPDLTLLLDVPLEVSLERIGR---VREK---DRFEREQADFFTRVRNAYFSRAAANP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D   S ++V T+I
Sbjct: 178 ERYAVIDGNRSPEAVRTSI 196


>gi|329942859|ref|ZP_08291638.1| thymidylate kinase [Chlamydophila psittaci Cal10]
 gi|313848031|emb|CBY17029.1| thymidylate kinase [Chlamydophila psittaci RD1]
 gi|325507234|gb|ADZ18872.1| thymidylate kinase [Chlamydophila psittaci 6BC]
 gi|328815119|gb|EGF85108.1| thymidylate kinase [Chlamydophila psittaci Cal10]
 gi|328914700|gb|AEB55533.1| thymidylate kinase [Chlamydophila psittaci 6BC]
          Length = 207

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +  +V  TREPGG+   E  R  +L     E   
Sbjct: 1   MFIVIEGCEGSGKSSLTQLLKDKLMAEGKEVVATREPGGSSLGERVRDWILDPSTTEISP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F AAR  H+   I PAL  GKI++CDRF DS+  YQG        ++ +L    
Sbjct: 61  YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V E  ++P+ T +LD+P D GLKR Q + S       D FE K +  H K R+ FL +A 
Sbjct: 121 VGEKKILPNLTCLLDIPADEGLKRKQQQKS------FDKFENKSLAYHTKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++PD   ++D+    +     ++    EL
Sbjct: 175 SRPDSYLVLDARQPIEESLNKVMTAYTEL 203


>gi|227545157|ref|ZP_03975206.1| dTMP kinase [Lactobacillus reuteri CF48-3A]
 gi|300909170|ref|ZP_07126631.1| thymidylate kinase [Lactobacillus reuteri SD2112]
 gi|227184889|gb|EEI64960.1| dTMP kinase [Lactobacillus reuteri CF48-3A]
 gi|300893035|gb|EFK86394.1| thymidylate kinase [Lactobacillus reuteri SD2112]
          Length = 213

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ I  +++ L  Q     V  TREPGG   +E  R VL      +
Sbjct: 3   GKFISFEGPDGAGKTSVIQQIQQQLEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDRF+DSS AYQG         +  + 
Sbjct: 63  MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  +MP  TI LD+  +IGL+R+        S  ++  +++ +  H+  RQ +L + 
Sbjct: 123 QFAIDGLMPSLTIYLDIESEIGLRRIAE----HRSNQINRLDKEKLAFHQTVRQSYLKLY 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           +N P+R  ++D++   + V  ++
Sbjct: 179 KNYPERIKLIDASQPLEKVIEDV 201


>gi|311106019|ref|YP_003978872.1| thymidylate kinase [Achromobacter xylosoxidans A8]
 gi|310760708|gb|ADP16157.1| thymidylate kinase [Achromobacter xylosoxidans A8]
          Length = 207

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 10/199 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG++GAGK+TH   +  FL+ +  DV  TREPGGTP  E  R +LL+   D 
Sbjct: 3   TRGRFITLEGVDGAGKSTHTVWIADFLRAQGLDVVSTREPGGTPLGEKLRGLLLT---DP 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G + E ++  AAR +H+  VI PAL  G  ++CDR+ D++YAYQG         + +L+
Sbjct: 60  MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGASRVAALE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +Q   PD T + D+P+++   R+ +    RE    D FER+     E+ R+ +   A
Sbjct: 120 DW-MQAGQPDRTWLFDVPLEVARARLAD---AREP---DRFEREGAAFFERTREAYHARA 172

Query: 182 RNQPDRCHIVDSAHSFQSV 200
                R  IVDS  S   +
Sbjct: 173 ATDQKRIRIVDSTQSIAQI 191


>gi|104774437|ref|YP_619417.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116514536|ref|YP_813442.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274732|sp|Q048W8|KTHY_LACDB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123378380|sp|Q1G923|KTHY_LACDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|103423518|emb|CAI98420.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116093851|gb|ABJ59004.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325126247|gb|ADY85577.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 212

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEG +GAGKTT I+ + + +Q +   ++ VTREPGG+  AE  R ++L     E 
Sbjct: 3   GYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AA+R  HV  +I PAL  G +++ DRF+DSS AYQG+    + L +D + +
Sbjct: 63  NAKTEALLYAASRSQHVSEIINPALKRGDLVMSDRFVDSSLAYQGQ---GRGLGIDEVAQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +   + PD TI LDL    GL R+    S  E    D  E++ +  HE+  + +  
Sbjct: 120 INAFATGHLEPDLTIFLDLDPAQGLARIAKVRSGSE----DRLEQEKLAFHEEVYRGYQK 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +  PDR  +VD++     V    + +V
Sbjct: 176 VNQAHPDRVKVVDASQDLPQVVAASVKLV 204


>gi|332042231|gb|EGI78557.1| thymidylate kinase [Hylemonella gracilis ATCC 19624]
          Length = 211

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG F+SFEGI+GAGK+THI  L + L+ + + V +TREPGGTP AE  R ++L+  +D  
Sbjct: 2   SGFFVSFEGIDGAGKSTHIERLAQVLREQGHMVTLTREPGGTPLAERLRALVLAEKMD-- 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++  AAR DH++ VI PAL  G  +LCDR+ D+SYAYQG         L +L+ 
Sbjct: 60  -ALTEALLVFAARRDHLQTVIEPALARGDAVLCDRYTDASYAYQGGGRGLDVSVLATLER 118

Query: 123 I------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                  +     PD T+  DL  ++  +R+        +   D FE + V    +  + 
Sbjct: 119 WVQAKPGAAGLRQPDLTLWFDLAPELAAERLSG------ARAPDKFEAEPVAFFRRVAEG 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +   A   P R   +D+A S ++V   +L +V
Sbjct: 173 YARRAAEDPGRFARLDAAQSREAVWDELLRVV 204


>gi|229015433|ref|ZP_04172435.1| Thymidylate kinase [Bacillus cereus AH1273]
 gi|229021638|ref|ZP_04178225.1| Thymidylate kinase [Bacillus cereus AH1272]
 gi|228739641|gb|EEL90050.1| Thymidylate kinase [Bacillus cereus AH1272]
 gi|228745852|gb|EEL95852.1| Thymidylate kinase [Bacillus cereus AH1273]
          Length = 208

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDIAFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +VD+    + +   ++ IV
Sbjct: 175 VVERFSDRIVVVDADQPMEKLIEEVIQIV 203


>gi|303251157|ref|ZP_07337341.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|307251422|ref|ZP_07533336.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|307253501|ref|ZP_07535371.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|302650008|gb|EFL80180.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306856506|gb|EFM88648.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306859002|gb|EFM91045.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 208

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 13/208 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGKTT   ++   L++    V  TREPGGTP AE  RH++     +   
Sbjct: 3   GKFIVLEGLEGAGKTTAHQVILAQLEKAGKSVVQTREPGGTPLAEKLRHLIKHETEEAVS 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
            +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQ G R   +HL L++L+E
Sbjct: 63  DKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHL-LETLKE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
             +    PD TI LD+   +GL R + R  L   E   LD+F R         RQ +L++
Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGRGELDRIEQQSLDFFYRT--------RQRYLEL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +N  ++  I+++  S + VA +I   V
Sbjct: 174 TQNN-EKAVIINAEQSIEQVAADIQQAV 200


>gi|238855359|ref|ZP_04645671.1| dTMP kinase [Lactobacillus jensenii 269-3]
 gi|260664925|ref|ZP_05865776.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US]
 gi|282934589|ref|ZP_06339836.1| dTMP kinase [Lactobacillus jensenii 208-1]
 gi|313472529|ref|ZP_07813019.1| dTMP kinase [Lactobacillus jensenii 1153]
 gi|238832020|gb|EEQ24345.1| dTMP kinase [Lactobacillus jensenii 269-3]
 gi|239529963|gb|EEQ68964.1| dTMP kinase [Lactobacillus jensenii 1153]
 gi|260561408|gb|EEX27381.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US]
 gi|281301341|gb|EFA93638.1| dTMP kinase [Lactobacillus jensenii 208-1]
          Length = 215

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 120/210 (57%), Gaps = 11/210 (5%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKTT +  L+++  ++   ++ VTREPGG+  AEA R ++L     E
Sbjct: 2   AGYFITFEGPDGAGKTTVLEKLIEKIKEQVTCEILVTREPGGSKIAEAIREIILDPENTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  GK++  DRF+DSS AYQG     ++L +D + 
Sbjct: 62  MDDRTEALLYAAARSQHMAEVVFPALEAGKLVFSDRFVDSSLAYQG---MGRNLGIDKVA 118

Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           EI   +   + PD T+ LD+  + GL R+      +E    D  E++ +  H+K    + 
Sbjct: 119 EINQFATDGLNPDLTLFLDIKPEDGLARIAKVRPDKE----DRLEKEKLSFHKKVYTGYQ 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +I +  P+R  +VD++     V  + L I+
Sbjct: 175 EIVKKYPERIKVVDASQDVDYVVADCLTIL 204


>gi|313124284|ref|YP_004034543.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280847|gb|ADQ61566.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|325685698|gb|EGD27777.1| thymidylate kinase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 212

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEG +GAGKTT I+ + + +Q +   ++ VTREPGG+  AE  R ++L     E 
Sbjct: 3   GYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AA+R  HV  +I PAL  G +++ DRF+DSS AYQG+    + L +D + +
Sbjct: 63  NAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQ---GRGLGIDEVAQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +   + PD TI LDL    GL R+    S  E    D  E++ ++ HE+  + +  
Sbjct: 120 INAFATGHLEPDLTIFLDLDPAQGLARIAKVRSGSE----DRLEQEKLVFHEEVYRGYQK 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +  PDR  +VD++     V    + +V
Sbjct: 176 VNQAHPDRVKVVDASQDLPQVVAASVKLV 204


>gi|148272108|ref|YP_001221669.1| hypothetical protein CMM_0928 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166221738|sp|A5CPG8|KTHY_CLAM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147830038|emb|CAN00966.1| tmkA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 211

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 122/208 (58%), Gaps = 18/208 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+FI+ EG +G GK+T  +LL+ +L+ + ++V VTREPGG+      R ++L       
Sbjct: 2   TGVFITLEGGDGVGKSTQSALLRGWLEDEGHEVVVTREPGGSELGVEIREIVLHR-RGHI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R  HVE V+RPAL  G ++L DR+LDSS AYQG   + + L    ++E
Sbjct: 61  APRAEALLYAADRAHHVETVVRPALDRGAVVLQDRYLDSSVAYQG---AGRVLDAGEIRE 117

Query: 123 ISV---QEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +S+   Q ++PD T++LDL      + L   + R+   ES      ER D   HE+ RQ 
Sbjct: 118 LSLWAAQGLLPDLTVLLDLDQAAARVRLDAARTRFDRLES------ERAD--FHERVRQA 169

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204
           FL +A  +P+R  +VD+A   + +A  I
Sbjct: 170 FLGLAGAEPERFLVVDAARPREEIAAAI 197


>gi|225351239|ref|ZP_03742262.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158695|gb|EEG71937.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 219

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 20/224 (8%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN  G+FISFEG++G GKTT +  L+ +++ +  +  VTREPGGT    A R +LL  GV
Sbjct: 1   MNMQGIFISFEGVDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLG-GV 59

Query: 60  D----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           +    +    AEA++FAA R  HV  VIRPAL  G +++ DR+LDSS AYQ      + L
Sbjct: 60  EGSDADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQA---GGREL 116

Query: 116 FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               ++++S+    E++P+ T +LDL       R+Q+     ESA  D+  R        
Sbjct: 117 TAGEIRDLSMWATCELLPNRTYLLDLDPVQSHARLQHDEDRMESAGNDFQRRT------- 169

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            RQ FLD+A+ +  R  ++D++ S   V ++I +   ++ Q + 
Sbjct: 170 -RQAFLDLAKAESQRFRVIDASQSIDEVWSHIQDDFAQISQTKT 212


>gi|224824708|ref|ZP_03697815.1| dTMP kinase [Lutiella nitroferrum 2002]
 gi|224603201|gb|EEG09377.1| dTMP kinase [Lutiella nitroferrum 2002]
          Length = 208

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG++GAGK+T ++ ++ +L  +  D   TREPGGT   E  R +LL+    
Sbjct: 1   MRRGTFITLEGVDGAGKSTQLAAVRDWLAEQGIDAVFTREPGGTVLGEKLRELLLAVDT- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   E E ++  AAR +H+  VI PAL  G+ ++ DRF D+++AYQG         +++L
Sbjct: 60  EVTLETETLLMFAARQEHIARVIEPALAAGRWVVSDRFTDATFAYQGGGRGLPFARIEAL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++   Q + PD T++ D+P+D+  +R+           LD FE++    H + R  +L  
Sbjct: 120 EDWVQQGLQPDLTLLFDVPLDVAARRMAG-----GERVLDRFEQEAADFHARVRAAYLQR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
           A   P R  +VD+  S + V   ++ 
Sbjct: 175 ASANP-RIAVVDANRSPEQVRAEVMR 199


>gi|325696293|gb|EGD38184.1| thymidylate kinase [Streptococcus sanguinis SK160]
          Length = 212

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL++    +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKKYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GKI+L DRF+DSS AYQG         +D L
Sbjct: 61  AMDAKTELLLYIASRRQHLAERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVADIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIARSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|218767791|ref|YP_002342303.1| thymidylate kinase [Neisseria meningitidis Z2491]
 gi|304388080|ref|ZP_07370209.1| thymidylate kinase [Neisseria meningitidis ATCC 13091]
 gi|14285515|sp|Q9JVE7|KTHY_NEIMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|121051799|emb|CAM08105.1| putative thymidylate kinase [Neisseria meningitidis Z2491]
 gi|304337937|gb|EFM04077.1| thymidylate kinase [Neisseria meningitidis ATCC 13091]
 gi|319410042|emb|CBY90376.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis WUE 2594]
          Length = 206

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS      V  +I  ++
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200


>gi|148543567|ref|YP_001270937.1| thymidylate kinase [Lactobacillus reuteri DSM 20016]
 gi|184152974|ref|YP_001841315.1| thymidylate kinase [Lactobacillus reuteri JCM 1112]
 gi|227363473|ref|ZP_03847595.1| thymidylate kinase [Lactobacillus reuteri MM2-3]
 gi|325681917|ref|ZP_08161435.1| thymidylate kinase [Lactobacillus reuteri MM4-1A]
 gi|166987704|sp|A5VIC6|KTHY_LACRD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621731|sp|B2G5V3|KTHY_LACRJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148530601|gb|ABQ82600.1| thymidylate kinase [Lactobacillus reuteri DSM 20016]
 gi|183224318|dbj|BAG24835.1| thymidylate kinase [Lactobacillus reuteri JCM 1112]
 gi|227071487|gb|EEI09788.1| thymidylate kinase [Lactobacillus reuteri MM2-3]
 gi|324978561|gb|EGC15510.1| thymidylate kinase [Lactobacillus reuteri MM4-1A]
          Length = 213

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 6/203 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ I  ++  L  Q     V  TREPGG   +E  R VL      +
Sbjct: 3   GKFISFEGPDGAGKTSVIQQIQLELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDRF+DSS AYQG         +  + 
Sbjct: 63  MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  +MP  TI LD+  +IGLKR+        S  ++  + + +  H   RQ +L + 
Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRIAE----HRSNQVNRLDEEKLEFHRTVRQSYLKLY 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           +N P+R  ++D++   + V  ++
Sbjct: 179 QNYPERIELIDASQPLEKVIEDV 201


>gi|251794049|ref|YP_003008780.1| thymidylate kinase [Paenibacillus sp. JDR-2]
 gi|247541675|gb|ACS98693.1| thymidylate kinase [Paenibacillus sp. JDR-2]
          Length = 217

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 113/205 (55%), Gaps = 4/205 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+ EG EGAGKTT I  L   +Q++   V  TREPGG P AE  R V+L     
Sbjct: 1   MNKGIFITIEGGEGAGKTTLIEQLAHTMQQRGKTVITTREPGGIPIAEQIRSVILDRNHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA+++AA+R  H+   + PAL +G+I++CDRF+DSS AYQG         + S+
Sbjct: 61  GMDARTEALLYAASRRQHLVEKVMPALADGQIVICDRFVDSSLAYQGHARGLGMEEVWSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V   MP  TI +D+  ++GL R++     RE   LD    + +  H+  R+ +  +
Sbjct: 121 NRFAVDGAMPQLTIYMDIDPEVGLARIRAAGE-REVNRLDL---ESLAFHQLVREGYQKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
               P+R   +D+ ++  +V   ++
Sbjct: 177 LEQFPERIVQIDAGNAANAVLEEVI 201


>gi|121634466|ref|YP_974711.1| thymidylate kinase [Neisseria meningitidis FAM18]
 gi|166221758|sp|A1KST1|KTHY_NEIMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120866172|emb|CAM09912.1| putative thymidylate kinase [Neisseria meningitidis FAM18]
 gi|325131877|gb|EGC54577.1| thymidylate kinase [Neisseria meningitidis M6190]
          Length = 206

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS      V  +I  ++
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200


>gi|307288618|ref|ZP_07568599.1| thymidylate kinase [Enterococcus faecalis TX0109]
 gi|306500372|gb|EFM69708.1| thymidylate kinase [Enterococcus faecalis TX0109]
 gi|315165331|gb|EFU09348.1| thymidylate kinase [Enterococcus faecalis TX1302]
          Length = 212

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 7/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG +GAGKT+ +  + +R  +     +  TREPGG P AE  R V+L    D  
Sbjct: 3   GIFITFEGPDGAGKTSVLKEVAERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF DSS AYQG         + S+  
Sbjct: 63  DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFADSSLAYQGAGRRIGIAPIASINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + V PD TI LD+  D GL+R+Q NR     +  +D  + + +  H++ R  +L +A
Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|229544854|ref|ZP_04433579.1| thymidylate kinase [Enterococcus faecalis TX1322]
 gi|229310022|gb|EEN76009.1| thymidylate kinase [Enterococcus faecalis TX1322]
          Length = 212

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 7/199 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG +GAGKT+ +  + +R  +     +  TREPGG P AE  R V+L    D  
Sbjct: 3   GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+  
Sbjct: 63  DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + V PD TI LD+  D GL+R+Q NR     +  +D  + + +  H++ R  +L +A
Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSV 200
              P R   +D+  S + V
Sbjct: 178 EENPQRIKKIDARMSLELV 196


>gi|311744559|ref|ZP_07718359.1| thymidylate kinase [Aeromicrobium marinum DSM 15272]
 gi|311312178|gb|EFQ82095.1| thymidylate kinase [Aeromicrobium marinum DSM 15272]
          Length = 217

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 9/203 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG+F++ EG EG GK+T   LL  +L  + + V VTREPGGTP     R ++L      
Sbjct: 6   DSGVFVALEGGEGGGKSTQSGLLASWLTERGHQVLVTREPGGTPVGSQLRRIVLDPATGA 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +  EA+++AA + +HVE ++ PAL  G+++L DR++DS+ AYQG   +     L+ + 
Sbjct: 66  LNSRTEALIYAADKAEHVEALVLPALAAGQVVLTDRYVDSTLAYQGAGRAIDVQELEHVA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +  ++ P  T++LD+   +GL R             D  E + +  H + R+ FL +A
Sbjct: 126 RWATADLRPHLTVVLDIDPVVGLARAGEP---------DRIEAEPLAFHRRVREHFLRLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
              PD   +VD+    + V  +I
Sbjct: 177 AADPDHYLVVDADRPAEQVQADI 199


>gi|93004986|ref|YP_579423.1| thymidylate kinase [Psychrobacter cryohalolentis K5]
 gi|92392664|gb|ABE73939.1| thymidylate kinase [Psychrobacter cryohalolentis K5]
          Length = 225

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 115/219 (52%), Gaps = 16/219 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FISFEG EG GKTT I  L   LQ    D   TREPGG+P AE  R +LL      
Sbjct: 17  TQGRFISFEGTEGVGKTTAIEQLCARLQAHGIDYLRTREPGGSPFAERLREILLDPNT-A 75

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFL 117
              + E ++  AAR DH++ VI PAL  G  ++CDRF DS+ AYQG    + D+     +
Sbjct: 76  INDDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDAIVRAKI 135

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D L E  V + +P+ T+ LDLPV  G+ R   R      +  D FE++      +  Q F
Sbjct: 136 DMLIEQFVMQ-LPELTLWLDLPVLEGMARANKR------SAADRFEQQATEFFTRVHQGF 188

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +A  QP+R   +D++ S   V+  I    W+ +++++
Sbjct: 189 SVLASEQPERIQRIDASGSANEVSARI----WQTIEEKL 223


>gi|227519453|ref|ZP_03949502.1| thymidylate kinase [Enterococcus faecalis TX0104]
 gi|227073065|gb|EEI11028.1| thymidylate kinase [Enterococcus faecalis TX0104]
          Length = 212

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 7/199 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG +GAGKT+ +  + +R  +     +  TREPGG P AE  R V+L    D  
Sbjct: 3   GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+  
Sbjct: 63  DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + V PD TI LD+  D GL+R+Q NR     +  +D  + + +  H++ R  +L +A
Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSV 200
              P R   +D+  S + V
Sbjct: 178 EENPQRIKKIDARMSLELV 196


>gi|220927615|ref|YP_002504524.1| thymidylate kinase [Clostridium cellulolyticum H10]
 gi|219997943|gb|ACL74544.1| thymidylate kinase [Clostridium cellulolyticum H10]
          Length = 206

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 115/204 (56%), Gaps = 6/204 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT I L++++L+    +V ++REPGGT  +E  R ++L     
Sbjct: 1   MRKGLFITVEGTDGSGKTTQIKLMEQYLKDMGNEVVLSREPGGTRISEMIRDLILDPENK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++AAAR  HV  VIRPA+  GK ++CDRF+DSSYAYQG         +  +
Sbjct: 61  DISPLTEMMLYAAARAQHVSQVIRPAIESGKSVICDRFVDSSYAYQGCGRGVDLKTIADV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++  V+PD T  LDL   + ++R        +S   D  E++ +  H +  + +  +
Sbjct: 121 NRAAIDGVVPDITFFLDLDPRVAMER------RVKSTGADRIEQEKMDFHIRVYEGYERM 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A   P+R   +D++ S + +++ I
Sbjct: 175 ALLYPERIKTIDASKSIEEISSQI 198


>gi|224475615|ref|YP_002633221.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420222|emb|CAL27036.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 204

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 14/212 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSC-GVDEF 62
           FI+FEG EG+GKTT   +L+R  +R  ++YDV  TREPGG PAAE  R +LL    VD+ 
Sbjct: 4   FITFEGPEGSGKTT---VLQRVAERLSQDYDVLKTREPGGVPAAEQIREILLDGEAVDD- 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++FAA+R +H+   + PAL E K++LCDR++DSS AYQG         + ++ E
Sbjct: 60  --RTEALLFAASRREHLVEKVLPALKEDKVVLCDRYIDSSLAYQGFARGIGVEEVRAINE 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  + PD TI LD+  + G +R++N         ++  + + +  H++  + + D+  
Sbjct: 118 FAINGLYPDLTIYLDITAETGRERIENN-----DRNMNRLDHESIAFHQRVIKGYHDLID 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P+R  ++D+    ++V  +    +   + K
Sbjct: 173 KEPERFKVIDANQELEAVVEDTYTAIKMFLGK 204


>gi|329925532|ref|ZP_08280406.1| dTMP kinase [Paenibacillus sp. HGF5]
 gi|328939815|gb|EGG36155.1| dTMP kinase [Paenibacillus sp. HGF5]
          Length = 234

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ EG +G+GKTT +  L  F+Q  +    +TREPGG   AE  R ++L        A
Sbjct: 27  LFITVEGGDGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRSIILDPEHTSMDA 86

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AAAR  H+   + PAL +G  +LCDRF+DSS  YQG         + S+ + +
Sbjct: 87  RTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVWSINQFA 146

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++ D+   IGL R+    + RE   LD    +++  HEK R+ +L +A   
Sbjct: 147 IDTRMPDLTLLFDIEPRIGLSRIAAN-AEREWNRLDM---ENLTFHEKVREGYLLVAERN 202

Query: 185 PDRCHIVDSAHS 196
           PDR  IVD++ +
Sbjct: 203 PDRIRIVDASKT 214


>gi|256616735|ref|ZP_05473581.1| thymidylate kinase [Enterococcus faecalis ATCC 4200]
 gi|256596262|gb|EEU15438.1| thymidylate kinase [Enterococcus faecalis ATCC 4200]
 gi|315032614|gb|EFT44546.1| thymidylate kinase [Enterococcus faecalis TX0017]
 gi|315143843|gb|EFT87859.1| thymidylate kinase [Enterococcus faecalis TX2141]
          Length = 212

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 7/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+FEG +GAGKT+ +  + +R  +     +  TREPGG P AE  R V+L    D  
Sbjct: 3   GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+  
Sbjct: 63  DERTEALLYAAARRQHLVEKIFPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + V PD TI LD+  D GL+R+Q NR     +  +D  + + +  H++ R  +L +A
Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|171780208|ref|ZP_02921112.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281556|gb|EDT46991.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 208

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 5/210 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ I+FEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIITFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKEIIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + S     PD T+  D+  +IGL R+      RE   LD  E+ D  +H++ RQ +LD+
Sbjct: 121 NDFSTDGRKPDLTLYFDVESEIGLARIAKNAD-REVNRLD-LEKLD--MHKRVRQGYLDL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+ + +R   +D++   + V     +++ E
Sbjct: 177 AQTE-ERIVTIDASRELEQVVAEATHVILE 205


>gi|268318943|ref|YP_003292599.1| hypothetical protein FI9785_450 [Lactobacillus johnsonii FI9785]
 gi|262397318|emb|CAX66332.1| tmk [Lactobacillus johnsonii FI9785]
          Length = 213

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKTT I+ ++K+  Q       VTREPGG+  +E  R ++L     E 
Sbjct: 3   GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG     ++L ++ +++
Sbjct: 63  DDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQG---VGRNLGIEEVKQ 119

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+      + PD TI LDL   +GL R++   + +E    D  E++ +  H K    + +
Sbjct: 120 INDFGTGGLEPDLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    PDR   VD+    + VA N + I+
Sbjct: 176 LLERYPDRIKKVDANLPIKDVAANSVKII 204


>gi|320547322|ref|ZP_08041613.1| dTMP kinase [Streptococcus equinus ATCC 9812]
 gi|320448020|gb|EFW88772.1| dTMP kinase [Streptococcus equinus ATCC 9812]
          Length = 210

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKDSIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + S     PD T+  D+  ++GL R+  + + RE   LD  E+ D  +H++ RQ +LD+
Sbjct: 121 NDFSTDGREPDLTLYFDVESEVGLDRIA-KNADREVNRLD-LEKLD--MHKRVRQGYLDL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A+ + +R   +D++   + V  +   ++ E + K
Sbjct: 177 AQTE-NRIVTIDASRELEQVVADATQVILERLAK 209


>gi|288965848|pdb|3LD9|A Chain A, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
 gi|288965849|pdb|3LD9|B Chain B, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
 gi|288965850|pdb|3LD9|C Chain C, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
 gi|288965851|pdb|3LD9|D Chain D, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
          Length = 223

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 17/190 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61
           +FI+FEGI+G+GKTT   LL  +L       +V +TREPGGT   E+ R++L    G+D 
Sbjct: 22  MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDS 81

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E + F A R +H   +I+P+LM+ KI++CDRF+DS+ AYQG         +D L 
Sbjct: 82  L---SELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLN 138

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ V +V PD T I+D+ ++  L R          +C + +E  D+  + + R  F DIA
Sbjct: 139 DL-VIDVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIA 187

Query: 182 RNQPDRCHIV 191
           +  P RCH++
Sbjct: 188 KKNPHRCHVI 197


>gi|294791185|ref|ZP_06756342.1| dTMP kinase [Scardovia inopinata F0304]
 gi|294457656|gb|EFG26010.1| dTMP kinase [Scardovia inopinata F0304]
          Length = 216

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 20/222 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEG++G GKTT  + LK +L  +   V +TREPGGT   E  R +LL    D+  
Sbjct: 13  GLFVTFEGVDGVGKTTQATRLKNYLIHQGRQVLITREPGGTHLGEQIRQLLLHG--DDEA 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
              EA+++AA+R   V   IRPAL  GK+++ DR++DSS AYQ G R+ +    +  L E
Sbjct: 71  PRTEALLYAASRAQLVFQEIRPALNMGKVVISDRYIDSSLAYQAGGRELTMEQ-IRQLNE 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + P  T +LD+  +    R+       ES+  D+F R         RQ FLD+A 
Sbjct: 130 WATNGLWPQRTYLLDMDFEQAQARLSGPKDRLESSGADFFNRT--------RQAFLDLAG 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
            +PDR  I++++ S        ++ VW+ V+  +  L +++D
Sbjct: 182 QEPDRFVILNASLS--------VDQVWDAVKADIDSLLARRD 215


>gi|58697581|ref|ZP_00372803.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans]
 gi|58535919|gb|EAL59679.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans]
          Length = 197

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 15/194 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++     +V +TREPGGT  AE  R VLL+  +D  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLLTNNIDPI 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG   S     +  L +
Sbjct: 77  ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 L-VEIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIVDSAHS 196
            +P RC ++    +
Sbjct: 184 KEPVRCSVITGIET 197


>gi|299820920|ref|ZP_07052809.1| thymidylate kinase [Listeria grayi DSM 20601]
 gi|299817941|gb|EFI85176.1| thymidylate kinase [Listeria grayi DSM 20601]
          Length = 217

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 10/197 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +G+GKTT  + +   L  +N     TREPGG+P +E  R V+L  G +  
Sbjct: 9   SGFFITLEGPDGSGKTTVGNKIAEKLTAENIAYIKTREPGGSPISEKLREVILGIGNEAM 68

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++ AAAR  HV   IRPAL E  ++LCDRFLDSS AYQ      ++L +D +  
Sbjct: 69  DPRTEVLLIAAARRQHVVETIRPALAENLVVLCDRFLDSSLAYQA---GGRNLDMDEVLA 125

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +V++ MPD T  LD+P ++GL+R+    +  +   ++  +++D++ H++  + + +
Sbjct: 126 INHYAVEDTMPDRTYYLDVPAEVGLERI----AANKGREINRLDQEDIVYHQRVGRAYAE 181

Query: 180 IARNQPDRCHIVDSAHS 196
           +    P+R   +D+  +
Sbjct: 182 VMNRFPERFKRMDAMQA 198


>gi|15606283|ref|NP_213662.1| thymidylate kinase [Aquifex aeolicus VF5]
 gi|6016457|sp|O67099|KTHY_AQUAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|158429380|pdb|2PBR|A Chain A, Crystal Structure Of Thymidylate Kinase (Aq_969) From
           Aquifex Aeolicus Vf5
 gi|158429381|pdb|2PBR|B Chain B, Crystal Structure Of Thymidylate Kinase (Aq_969) From
           Aquifex Aeolicus Vf5
 gi|2983484|gb|AAC07063.1| thymidylate kinase [Aquifex aeolicus VF5]
          Length = 195

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 15/201 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GKTT    L  +L++K Y V + REPGGT   E  R +LL+  +DE   
Sbjct: 1   MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLTEELDE--- 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A+R   +E  I P L   K+++ DRF+ S+ AYQG        F+ +L E +
Sbjct: 58  RTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + V PD T++LD+PVDI L+R++ +         + FE K+ +  EK R+ FL++A+ +
Sbjct: 118 TRGVKPDITLLLDIPVDIALRRLKEK---------NRFENKEFL--EKVRKGFLELAKEE 166

Query: 185 PDRCHIVDSAHSFQSVATNIL 205
            +   ++D++   + V   IL
Sbjct: 167 EN-VVVIDASGEEEEVFKEIL 186


>gi|68171235|ref|ZP_00544639.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88658326|ref|YP_507050.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas]
 gi|123493813|sp|Q2GHN3|KTHY_EHRCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|67999355|gb|EAM86000.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599783|gb|ABD45252.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas]
          Length = 202

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 17/190 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61
           +FI+FEGI+G+GKTT   LL  +L       +V +TREPGGT   E+ R++L    G+D 
Sbjct: 1   MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDS 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E + F A R +H   +I+P+LM+ KI++CDRF+DS+ AYQG         +D L 
Sbjct: 61  L---SELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLN 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ V +V PD T I+D+ ++  L R          +C + +E  D+  + + R  F DIA
Sbjct: 118 DL-VIDVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIA 166

Query: 182 RNQPDRCHIV 191
           +  P RCH++
Sbjct: 167 KKNPHRCHVI 176


>gi|302332195|gb|ADL22388.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 205

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 4   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRTLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRNQNRLDQEDLKFHEKVIEGYQEIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204


>gi|58698493|ref|ZP_00373398.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225630910|ref|YP_002727701.1| thymidylate kinase [Wolbachia sp. wRi]
 gi|58534987|gb|EAL59081.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225592891|gb|ACN95910.1| thymidylate kinase [Wolbachia sp. wRi]
          Length = 212

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 15/194 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++     +V +TREPGGT  AE  R VLL+  +D  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLLTNNIDPI 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG   S     +  L +
Sbjct: 77  ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 L-VEIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIVDSAHS 196
            +P RC ++    +
Sbjct: 184 KEPVRCSVITGIET 197


>gi|42518522|ref|NP_964452.1| thymidylate kinase [Lactobacillus johnsonii NCC 533]
 gi|59798356|sp|Q74KZ7|KTHY_LACJO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|41582807|gb|AAS08418.1| thymidylate kinase [Lactobacillus johnsonii NCC 533]
          Length = 213

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKTT I+ ++K+  Q       VTREPGG+  +E  R ++L     E 
Sbjct: 3   GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG     ++L ++ +++
Sbjct: 63  DDRTEALLYAAQRSQHVSEVIRPALATGKVVLSDRFIDSSLAYQG---VGRNLGIEEVKQ 119

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+      + PD TI LDL   +GL R++   + +E    D  E++ +  H K    + +
Sbjct: 120 INDFGTGGLEPDLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    PDR   VD+    + VA N + I+
Sbjct: 176 LFERYPDRIKKVDANLPIKDVAANSVKII 204


>gi|300867280|ref|ZP_07111940.1| Thymidylate kinase [Oscillatoria sp. PCC 6506]
 gi|300334757|emb|CBN57106.1| Thymidylate kinase [Oscillatoria sp. PCC 6506]
          Length = 217

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 117/209 (55%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-QRKNY----DVHVTREPGGTPAAEAARHVLLSCG 58
           G  I FEG+EG+GKTT I   + +L  ++N+     + VTREPGGT   +  R +LL  G
Sbjct: 3   GKLIVFEGVEGSGKTTQIERSRLWLLSKENHCKVPQIVVTREPGGTDLGKGLRGLLLESG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE +++AA R  HVE V++P L +G I+LCDRF DS+ AYQG         ++
Sbjct: 63  GENICDRAELLLYAADRAQHVEAVLKPELAKGSIVLCDRFTDSTIAYQGYGRGLSLSLIN 122

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L EI+   +  D T+ LDL V++GL+RV+ R         D  E+ D+  H + +Q F 
Sbjct: 123 QLNEIATLGLQSDLTLWLDLEVEVGLRRVKRR------GVSDRIEQADLEFHRRVQQGFA 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207
           D+A    DR   VD+  S + V+  I +I
Sbjct: 177 DLATANRDRIIRVDANRSEEEVSEEIHHI 205


>gi|75908183|ref|YP_322479.1| thymidylate kinase [Anabaena variabilis ATCC 29413]
 gi|123609755|sp|Q3MBQ2|KTHY_ANAVT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|75701908|gb|ABA21584.1| thymidylate kinase [Anabaena variabilis ATCC 29413]
          Length = 211

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG+EG GKT+ + L   +LQ     V +TREPGGT      R +LL    D+ 
Sbjct: 2   GGRFIVFEGVEGCGKTSQMQLCAEWLQNLGISVILTREPGGTELGVDLRRLLLQKAEDKP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            AE  E +++AA R  HV   ++P L +GK +LCDR++DS+ AYQG   +     +  L 
Sbjct: 62  IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +I+   +  D TI LD+ V++GL R +      E+  LD  E++ +  H + +Q + ++A
Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----ENVGLDRIEQETIAFHRRVQQGYANLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            + P R   VD   S ++V   I  I+
Sbjct: 177 ASSPSRIIRVDGQLSKETVHKTIQEIL 203


>gi|309803553|ref|ZP_07697646.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d]
 gi|312870920|ref|ZP_07731025.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a]
 gi|308164437|gb|EFO66691.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d]
 gi|311093610|gb|EFQ51949.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a]
          Length = 213

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 11/213 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R+++L     E 
Sbjct: 3   GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG     + L +D +++
Sbjct: 63  NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  
Sbjct: 120 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    P+R   VD+  S   VA+  + I+ E +
Sbjct: 176 LLSAYPERIKRVDAELSIAEVASQSVKILEEYM 208


>gi|188584675|ref|YP_001916220.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349362|gb|ACB83632.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 206

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 10/209 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+G GK+T +  +   L++  ++V  TREPGGT   +A R +LL+       
Sbjct: 5   GKFITFEGIDGCGKSTQLKKVTSKLKKLGFNVVSTREPGGTSVGDAIREILLAPKHYNMT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E EA+++AA+R+ H+E  I P L E  I+LCDRF+DSS AYQG + S + +    + + 
Sbjct: 65  IETEALLYAASRVQHIEEFIIPNLAEDNIVLCDRFVDSSVAYQGIKLSHEEVI--RVNQP 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  +V PD T +    +DI  +R   R  + +    D  E + V    + R+ +L +A  
Sbjct: 123 AYDKVTPDITFL----IDITPERAAKRLGIEK----DRIENRGVNYQSQVRENYLFLAEE 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +PDR  I++   S + V   + N++ +++
Sbjct: 175 EPDRIVIINGDQSEEKVFEELWNVLEDIL 203


>gi|329946277|ref|ZP_08293871.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328527569|gb|EGF54564.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 253

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 8/213 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFISFEG +G GKTT I +L   L   + D  +TREPGGT      R +LL  G   
Sbjct: 10  HPGLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTGLGLEIRRLLLHGGY-- 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R  H+   +RPAL  G ++L DR+LDSS AYQG   S     +  L 
Sbjct: 68  VAPRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLS 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + ++PD TI+LD   D+  +R   R         D  E++        R+ FL +A
Sbjct: 128 LWATEGLLPDLTILLDGDPDLAEQRATGR------GAKDRLEQEGGTFRTSLRRQFLALA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +P R  ++D+  S   VA +++    E V++
Sbjct: 182 EAEPGRFVVIDADRSVDQVADDVIGAAVEAVRR 214


>gi|227888765|ref|ZP_04006570.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200]
 gi|227850602|gb|EEJ60688.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200]
          Length = 217

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKTT I+ ++K+  Q       +TREPGG+  +E  R ++L     E 
Sbjct: 7   GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLITREPGGSKISENIRTIILDPENKEM 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG     ++L ++ +++
Sbjct: 67  DDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQG---VGRNLGIEEVKQ 123

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+      + PD TI LDL   +GL R++   + +E    D  E++ +  H K    + +
Sbjct: 124 INDFGTGGLEPDLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    PDR   VD+    + VA N + I+
Sbjct: 180 LLERYPDRIKKVDANLPIKDVAANSVKII 208


>gi|258424483|ref|ZP_05687362.1| thymidylate kinase [Staphylococcus aureus A9635]
 gi|257845352|gb|EEV69387.1| thymidylate kinase [Staphylococcus aureus A9635]
          Length = 210

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 9   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGKI+LCDR++DSS AYQG         + +L E ++
Sbjct: 66  TEAMLFAASRREHLVLKVIPALKEGKIVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|89101171|ref|ZP_01174003.1| thymidylate kinase [Bacillus sp. NRRL B-14911]
 gi|89084106|gb|EAR63275.1| thymidylate kinase [Bacillus sp. NRRL B-14911]
          Length = 212

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 122/226 (53%), Gaps = 18/226 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG EGAGKTT I++L   L  + Y V  TREPGG   AE  R V+L     
Sbjct: 2   MDKGLFITAEGPEGAGKTTIINMLASGLADEGYKVMQTREPGGIEIAEQIRAVILDTKNT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
                 EA+++AAAR  H+   ++PAL EG I+LCDRF+DSS AYQG    ++ L +D  
Sbjct: 62  AMDPRTEALLYAAARRQHLAEKVQPALDEGYIVLCDRFIDSSLAYQG---YARGLGIDEV 118

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+   +++ +MP+ T+  D+    GL+R+  R   RE   LD    + +  H K R+ +
Sbjct: 119 YSINHFAIEGMMPELTLYFDIDPASGLQRI-GRNQGREVNRLDL---ESLEFHTKVREGY 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
             +    PDR   +D++   +         V++L   R+  L + K
Sbjct: 175 EILLAKFPDRISRIDASLPVEE--------VYQLASARLKSLFADK 212


>gi|223932402|ref|ZP_03624404.1| dTMP kinase [Streptococcus suis 89/1591]
 gi|302023623|ref|ZP_07248834.1| thymidylate kinase [Streptococcus suis 05HAS68]
 gi|330832635|ref|YP_004401460.1| dTMP kinase [Streptococcus suis ST3]
 gi|223898856|gb|EEF65215.1| dTMP kinase [Streptococcus suis 89/1591]
 gi|329306858|gb|AEB81274.1| dTMP kinase [Streptococcus suis ST3]
          Length = 212

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 117/208 (56%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEG +GAGKTT +  L   LQ    +V  TREPGG   AE  R+++L+    
Sbjct: 1   MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++F AAR  H++  I P L +GK+LL DRF+DSS AYQG         +  L
Sbjct: 61  EMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+  R + R+   LD  E+ D  +H + RQ +L+I
Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD--MHRRVRQGYLNI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +P+R   +D++   ++V  + L ++
Sbjct: 177 LEQEPERFVKIDASQPLEAVVADALAVI 204


>gi|78044441|ref|YP_358922.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123577218|sp|Q3AG12|KTHY_CARHZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77996556|gb|ABB15455.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 203

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 16/208 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG+EG+GKTT I  + R+L  KN    +TREPGGT   +  R +LL+       
Sbjct: 3   GKFITIEGVEGSGKTTQIQYIARYLTEKNIPHIITREPGGTALGKKIRELLLNPSYPVV- 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE +++ A R  HV   I P L +G  ++ DR+ DS+ AYQG         L S    
Sbjct: 62  PEAEILLYLADRAQHVGEKIIPHLDKGVWVISDRYFDSTLAYQGYGRGFDLTLLKSFIAF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + ++PD T+++DLP ++GL RV+ R         D  ER+ +  H++ R+ FL +AR+
Sbjct: 122 ATKGLIPDLTVLIDLPPEVGLSRVKGR------GEYDRLERETLEFHQRVREGFLQLARD 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           Q  R  +VD     +        I WE+
Sbjct: 176 Q--RFRVVDGRKKPE-------EIFWEI 194


>gi|227529519|ref|ZP_03959568.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540]
 gi|227350604|gb|EEJ40895.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540]
          Length = 213

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 120/210 (57%), Gaps = 10/210 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +G FISFEG +GAGKT+ I+ ++  L+++     V  TREPGG   +E  R VL      
Sbjct: 2   AGKFISFEGPDGAGKTSVITAIQAELEQQLGKEKVMYTREPGGNHISEQVRRVLFDEHNT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLD 118
           +     EA++FAAAR  H+ + I PAL +GK++LCDR++DSS AYQ  G     Q ++  
Sbjct: 62  DMDGRTEALLFAAARRQHIVSEILPALKDGKVILCDRYVDSSIAYQVAGRHLGEQKIW-- 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + ++  ++PD TI LD+   +GL+R+        +  ++  + + +  H+  R+ FL
Sbjct: 120 QINQYAIDGLLPDLTIYLDIESKLGLQRIAE----HRADQVNRLDEEQLSFHKTVREAFL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + R  P+R  ++D++ S   V +++   +
Sbjct: 176 RLQRENPERIKLIDASQSLPKVISDVKQTI 205


>gi|218283200|ref|ZP_03489270.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989]
 gi|218216018|gb|EEC89556.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989]
          Length = 212

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 119/214 (55%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+FEG +G+GKTT    ++  L +  YD   TREPGG+  AE+ R++LL     
Sbjct: 3   MKQGVFITFEGNDGSGKTTVCKAVQEELIKMGYDCIYTREPGGSKIAESIRNILLDVNNT 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  H++ V+ PAL   KI+LCDRF+DSS AYQG         +  +
Sbjct: 63  EMDDRTEALLYAASRRQHLKEVVLPALENKKIVLCDRFIDSSLAYQGIARGIGLKEVWDI 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++   MP+ T+ L + V+ G KR+  R        L+  ++++   H+  RQ +  +
Sbjct: 123 NQFAIDGCMPEKTLFLSVSVETGKKRMNLRGD------LNRLDQEESSFHKAVRQGYETL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               P+R  ++D+    + V  + +  V +++++
Sbjct: 177 VSMYPERIEVIDAEPCKEEVLKSAMECVLKVIKE 210


>gi|88705167|ref|ZP_01102879.1| Thymidylate kinase [Congregibacter litoralis KT71]
 gi|88700862|gb|EAQ97969.1| Thymidylate kinase [Congregibacter litoralis KT71]
          Length = 244

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 107/201 (53%), Gaps = 6/201 (2%)

Query: 12  IEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71
           I GAGK+T +S ++  L+    D+  TREPGGT   E  R  LL+         AE ++ 
Sbjct: 42  IFGAGKSTAMSYIEERLRDAGVDLICTREPGGTSLGEQLRETLLAPTEAGIAPLAELLMM 101

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131
            AAR  H+   I PAL  G+ +LCDRF D++YAYQG   +     +  L+E    ++ PD
Sbjct: 102 FAARAQHLSECILPALRRGQWVLCDRFTDATYAYQGAGRNMGEAPVALLEEFVQGDLRPD 161

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T++LD+P D+GL R + R        LD FE +D+   E+ RQ +L  AR    R  I+
Sbjct: 162 VTLLLDVPADLGLSRARGR------GALDRFELEDLAFFERVRQSYLSRARRSSGRYQII 215

Query: 192 DSAHSFQSVATNILNIVWELV 212
           D++     V   +  +V +L+
Sbjct: 216 DASAELADVERALQAVVKDLI 236


>gi|327490146|gb|EGF21934.1| thymidylate kinase [Streptococcus sanguinis SK1058]
          Length = 212

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGNGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|282915799|ref|ZP_06323567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139]
 gi|283768917|ref|ZP_06341826.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19]
 gi|282320290|gb|EFB50632.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139]
 gi|283461098|gb|EFC08184.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19]
          Length = 210

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 9   FITFEGPEGSGKTTVINEVYHRLA-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 66  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|229819159|ref|YP_002880685.1| thymidylate kinase [Beutenbergia cavernae DSM 12333]
 gi|229565072|gb|ACQ78923.1| thymidylate kinase [Beutenbergia cavernae DSM 12333]
          Length = 210

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 26/219 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F+SFEG +GAGKTT + LL  ++++   +V  TREPGGT      R ++L    ++  
Sbjct: 7   GVFVSFEGGDGAGKTTQLELLATWIEQAGREVVRTREPGGTAIGRTLRDLVLHG--EDVD 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++A  R  HV +++RPAL  G ++L DR++DSS AYQ      + L  D ++ +
Sbjct: 65  ARTEALLYATDRAHHVASLVRPALARGAVVLTDRYVDSSLAYQA---GGRELAADDVRRL 121

Query: 124 SVQEV---MPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           S+  V   MPD TI+LDL P  +           R +A  D  ER     H + R+ +L 
Sbjct: 122 SMWAVDGLMPDVTILLDLDPAHL---------PARLTAAPDRLERAGSAFHVRTREAYLG 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
           +A  +P+R  ++D+A     +A          V+ RV+P
Sbjct: 173 LAAREPERWLVLDAALGRAELAAQ--------VRARVAP 203


>gi|256826256|ref|YP_003150216.1| thymidylate kinase [Kytococcus sedentarius DSM 20547]
 gi|256689649|gb|ACV07451.1| thymidylate kinase [Kytococcus sedentarius DSM 20547]
          Length = 213

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 115/214 (53%), Gaps = 12/214 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             GLF++ EG +GAGK+T I LL   L  Q    +V VTREPGGT      R +LL    
Sbjct: 5   GHGLFVALEGGDGAGKSTQIRLLVEHLAGQHAGREVVVTREPGGTDLGRRIRELLLHG-- 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D     AEA++FAA R  HVE+++RPAL  G +++ DR++DSS AYQG       + + S
Sbjct: 63  DHVAPRAEALLFAADRAHHVESLVRPALDRGAVVVGDRYVDSSIAYQGAGRDLDAVEVAS 122

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   + + ++PD T++LD  VD    R       R  A  D  E +    HE+ RQ FLD
Sbjct: 123 ISRWATEGLVPDLTVLLD--VDPATGRS------RRGAEHDRLEAEPTAFHERVRQHFLD 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A   P R  ++D++   Q +   +   V  L++
Sbjct: 175 LAAAAPQRYLVLDASRPPQELGAEVARAVDGLLE 208


>gi|73663583|ref|YP_302364.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123641634|sp|Q49UZ1|KTHY_STAS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72496098|dbj|BAE19419.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 205

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 12/214 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I  + + L+ + Y V +TREPGG    E  R VLL    D+    
Sbjct: 4   FITFEGPEGSGKTTVIQQVAQKLENQ-YSVVLTREPGGVKTGEQIREVLLEG--DDMDDR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + P+L  GK++LCDR++DSS AYQG         + S+ E ++
Sbjct: 61  TEALLFAASRREHLVGKVIPSLENGKLVLCDRYIDSSLAYQGYARGIGIEEVKSINEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+ V +G +R+     L+     +  +++DV  HEK  + +  I  N+ 
Sbjct: 121 NGLYPDITIYLDVSVAVGRERI-----LKNQRNQNRLDQEDVKFHEKVVEGYKKIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           +R  ++++  S   V    +N  +E + K +  L
Sbjct: 176 ERFIVIEADRSIDEV----VNATYESISKYLEKL 205


>gi|297207416|ref|ZP_06923855.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910375|ref|ZP_07127828.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887979|gb|EFH26873.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300888364|gb|EFK83551.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 208

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 7   FITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 64  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 124 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 178

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 179 QRFKSVNADQPLENVVEDTYQTIIKYLEK 207


>gi|228982456|ref|ZP_04142715.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
 gi|228776639|gb|EEM24947.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
          Length = 206

 Score =  125 bits (313), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 17/198 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+S EG EG+GK+  I  L  +L+ +  +   +REPGG   AE  R +++    +E  
Sbjct: 5   GLFVSIEGGEGSGKSALIQGLSLYLEEQGMECLTSREPGGVKVAEEIRELIME---NEMD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA++FA+AR +H +N I PAL EGKI++CDRF+DSS  YQG     Q + +D++  I
Sbjct: 62  AITEALLFASARREHFKNKISPALTEGKIVICDRFVDSSIVYQG---YVQGIGMDNVLSI 118

Query: 124 SVQE----VMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + Q     VMP  T+ LD+   I L R+ QN    RE+   + F+ K +  H+K R+ +L
Sbjct: 119 NSQALEGLVMPHLTLYLDVEPTIALNRIAQNN---RET---NRFDEKSIEFHKKVREGYL 172

Query: 179 DIARNQPDRCHIVDSAHS 196
            I     +R   VD++ S
Sbjct: 173 LIEEKHSNRIKKVDASLS 190


>gi|295694727|ref|YP_003587965.1| thymidylate kinase [Bacillus tusciae DSM 2912]
 gi|295410329|gb|ADG04821.1| thymidylate kinase [Bacillus tusciae DSM 2912]
          Length = 209

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+FI+FEG +GAGK+T ++LL   LQ+       TREPGGT  ++  R +LL     E 
Sbjct: 2   TGVFITFEGPDGAGKSTQVALLASRLQKACIRCITTREPGGTTISDKIRGILLDPHHREM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA+R   V   IRP L  G +++CDR++D+S AYQG     +   L  L  
Sbjct: 62  TPRTEALLYAASRAQLVGEFIRPHLERGDVVICDRYVDASLAYQGALGLDRK-ELARLNH 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + P  T ++D+P D+GL RV+ R+S+     +D  E + +  HE  R+ FL  A+
Sbjct: 121 WATDGLEPLRTYLIDVPADVGLDRVRTRHSM--YGVMDRIEERSIEYHEAVRRWFLGQAQ 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P R  ++D     + V+  I   V  L+ 
Sbjct: 179 TSP-RYRVIDGTMPPEMVSEAIWRDVKSLLN 208


>gi|158339115|ref|YP_001520292.1| thymidylate kinase [Acaryochloris marina MBIC11017]
 gi|189028825|sp|B0C3N6|KTHY_ACAM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|158309356|gb|ABW30973.1| thymidylate kinase [Acaryochloris marina MBIC11017]
          Length = 231

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 114/221 (51%), Gaps = 17/221 (7%)

Query: 4   GLFISFEGIEGAGKTTHISL-------------LKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G FI FEG EGAGKTT ++L             +K ++Q     V  TREPGGT   ++ 
Sbjct: 3   GKFIVFEGGEGAGKTTQLNLVFEWLTGSGWTNRIKGYIQGDYPSVLTTREPGGTALGKSI 62

Query: 51  RHVLL---SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
           R +LL   + G +     AE ++FAA R  HV + + P L +G ++LCDR+ DS+ AYQG
Sbjct: 63  RKLLLDVTATGNESIDERAELLLFAADRAQHVSSCLLPHLQQGALVLCDRYTDSTIAYQG 122

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                    +  L +I+ Q ++ D T  LD+  + GL R  +R    E    D  E  ++
Sbjct: 123 YGRELDLTLIHQLNQIATQGLVSDLTFWLDIDPEFGLARTHDREQDPEIET-DRMEANEI 181

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             H++ RQ F D+AR  P+R   +++  S   VA  I  I+
Sbjct: 182 AFHQRLRQGFADLARQHPERIFRIEAHQSDDVVAQQIQGIL 222


>gi|282918262|ref|ZP_06326002.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427]
 gi|282317828|gb|EFB48197.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427]
          Length = 210

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 9   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 66  TEAMLFAASRREHLVLKVVPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|85374070|ref|YP_458132.1| thymidylate kinase [Erythrobacter litoralis HTCC2594]
 gi|84787153|gb|ABC63335.1| thymidylate kinase [Erythrobacter litoralis HTCC2594]
          Length = 212

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 106/213 (49%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T   LL   L  +  +  VTREPGGT  AEA R +LL    D
Sbjct: 1   MTRGRFIALEGGEGTGKSTQARLLAEALSTRGIECVVTREPGGTEGAEAIRRLLLDPPGD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +G  AEA++FAAAR DHVE +I PAL  G  ++ DRFLDSS AYQG         + +L
Sbjct: 61  GWGPRAEALLFAAARSDHVEKLILPALERGAWVVSDRFLDSSRAYQGGAGGIGDQAVRTL 120

Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +I    + PD T+++++ P  I       R + R+    D    +    H      F  
Sbjct: 121 HDIGSGGLRPDLTVLIEVEPATI-----AERLADRDGNRSDAIGGRSAQYHADVAASFKR 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            A   P    +VD   +   V + IL  +  L+
Sbjct: 176 FAAEDPGGFAVVDGEGTPDEVHSRILEAIEPLI 208


>gi|325978913|ref|YP_004288629.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|325178841|emb|CBZ48885.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 210

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +     PD T+  D+  +IGL R+  + + RE   LD  E+ D  +H++ R+ +L +
Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVREGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A  Q  R   +D++     V +  L I+ E + K+
Sbjct: 177 A-EQEKRIVTIDASRELADVVSETLQIILEQLAKK 210


>gi|317407094|gb|EFV87102.1| tmk protein [Achromobacter xylosoxidans C54]
          Length = 207

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 10/214 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+ EG++GAGK+TH   +  FL+ +  +V  TREPGGTP  E  R ++L+   D 
Sbjct: 3   SRGRFITLEGVDGAGKSTHTEWIAEFLRGQGLEVVSTREPGGTPLGEKLRALVLT---DP 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G + E ++  AAR +H+  VI PAL  G  ++CDR+ D++YAYQG         + +L 
Sbjct: 60  MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGAERVAAL- 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +Q   PD T + D+P+++   R+ +    RE    D FER+     E+ R  +   A
Sbjct: 119 ETWMQAGRPDRTWLFDVPLEVARARLAD---AREP---DRFEREGAAFFERTRAAYQARA 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +PDR  ++DS  +  ++   +   + ELV  R
Sbjct: 173 AAEPDRIRVIDSTRAIAAIRAELEAGLRELVAVR 206


>gi|50365491|ref|YP_053916.1| thymidylate kinase [Mesoplasma florum L1]
 gi|59798247|sp|Q6F0E1|KTHY_MESFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|50364047|gb|AAT76032.1| thymidylate kinase [Mesoplasma florum L1]
          Length = 211

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 9/211 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG++G+GKTT +  +K++L+  NY V +TREPGG P +E  R ++L+   D  G 
Sbjct: 1   MFITIEGMDGSGKTTALQRVKQYLEDLNYKVVMTREPGGLPLSEKIRELILNK--DGVGM 58

Query: 65  E--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           E   EA++F AAR +H+E VI+P L +G I++ DRF+DS+ AYQG        +L+ LQ+
Sbjct: 59  EPWTEALLFIAARKEHLEKVIKPYLKKGYIVISDRFMDSTTAYQGGARGLGVDYLNELQK 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             ++  +PD T+  +L  +   KR+  R    E   LD   RK     E  +  F ++  
Sbjct: 119 NILEGFLPDLTLYFELSFEDAEKRLSARPE--EKNRLDEEGRK---FKEAVKLAFEELVV 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P+R  ++D++ S + V      ++ E ++
Sbjct: 174 KEPNRITVIDASKSPEEVFEETKKVILEKIE 204


>gi|161508727|ref|YP_001574386.1| thymidylate kinase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253735215|ref|ZP_04869380.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|297591609|ref|ZP_06950246.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380498|ref|ZP_07363175.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|160367536|gb|ABX28507.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253726775|gb|EES95504.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|297575478|gb|EFH94195.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8]
 gi|304340943|gb|EFM06866.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312436430|gb|ADQ75501.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH60]
 gi|320139433|gb|EFW31311.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144210|gb|EFW35978.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 208

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 7   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 64  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 124 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 178

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 179 QRFKSVNADQPLENVVEDTYQTIIKYLEK 207


>gi|297621242|ref|YP_003709379.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044]
 gi|297376543|gb|ADI38373.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044]
          Length = 199

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 15/205 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FIS EG EG+GKTT I  L  +L+ K   V +TREPGGT   E+ R VLL       F 
Sbjct: 2   MFISVEGGEGSGKTTLIRNLAEYLESKGDQVLITREPGGTRFGESLRKVLLDPEFPAAFN 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AE ++F AAR+ H+E VI+PAL +GK ++CDRF DS+ AYQG     + L +  ++++
Sbjct: 62  ARAEMLLFLAARVQHIEEVIQPALRKGKTVICDRFNDSTIAYQG---GGRELGVVRVEQL 118

Query: 124 SVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +      PD T +LD+  +   +R+ NR         D  E++    H K R  F  +
Sbjct: 119 CFEVCDGFQPDKTFVLDINPETAFQRL-NRSK-------DRMEKESFDFHNKVRSAFYAL 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
               P+R H++++  S + V  ++L
Sbjct: 171 KDKHPNRIHLINADQSKEKVLADVL 195


>gi|78188893|ref|YP_379231.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
 gi|123579949|sp|Q3AS37|KTHY_CHLCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78171092|gb|ABB28188.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
          Length = 222

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 122/220 (55%), Gaps = 6/220 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T ++ L  +L++++  +   REPGGTP AE+ R +LL         
Sbjct: 1   MLITFEGIDGAGKSTQVAKLVAYLKQQSTPLLSLREPGGTPTAESIRSLLLD-NRKSITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F+A+R + VE +IRPAL EGK ++ DRF DS+ AYQG         L S+  +S
Sbjct: 60  IAELLLFSASRAELVETLIRPALAEGKTVILDRFFDSTTAYQGHGRGISLEQLHSIIALS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKRRQIFLD 179
             +++PD T  LDL  +  L+R  +R  L      +S   D  E+  +  + K R  +L 
Sbjct: 120 TGDLLPDVTFYLDLEPEEALRRAFSRSGLPLDFAAQSNESDRMEQAGIAFYHKVRNGYLT 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           + +  P R   +D+     ++  +I+  V   ++  +SPL
Sbjct: 180 LMQQHPSRFVALDATQPPDTLHQHIIAEVETRLKLHISPL 219


>gi|151220658|ref|YP_001331480.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257424593|ref|ZP_05601021.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427259|ref|ZP_05603660.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429895|ref|ZP_05606281.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432598|ref|ZP_05608960.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435503|ref|ZP_05611553.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876]
 gi|257794277|ref|ZP_05643256.1| thymidylate kinase [Staphylococcus aureus A9781]
 gi|258407206|ref|ZP_05680351.1| thymidylate kinase [Staphylococcus aureus A9763]
 gi|258420828|ref|ZP_05683764.1| thymidylate kinase [Staphylococcus aureus A9719]
 gi|258429598|ref|ZP_05688272.1| thymidylate kinase [Staphylococcus aureus A9299]
 gi|258446131|ref|ZP_05694292.1| thymidylate kinase [Staphylococcus aureus A6300]
 gi|258448039|ref|ZP_05696169.1| thymidylate kinase [Staphylococcus aureus A6224]
 gi|258452837|ref|ZP_05700832.1| thymidylate kinase [Staphylococcus aureus A5948]
 gi|258453814|ref|ZP_05701787.1| thymidylate kinase [Staphylococcus aureus A5937]
 gi|282895088|ref|ZP_06303308.1| thymidylate kinase [Staphylococcus aureus A8117]
 gi|282903066|ref|ZP_06310958.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160]
 gi|282904857|ref|ZP_06312717.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282907803|ref|ZP_06315642.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282910120|ref|ZP_06317926.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282913308|ref|ZP_06321099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899]
 gi|282923013|ref|ZP_06330699.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101]
 gi|282925555|ref|ZP_06333208.1| thymidylate kinase [Staphylococcus aureus A9765]
 gi|283957270|ref|ZP_06374728.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293500358|ref|ZP_06666210.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509296|ref|ZP_06668012.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809]
 gi|293515884|ref|ZP_06670574.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015]
 gi|150373458|dbj|BAF66718.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257272620|gb|EEV04740.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275910|gb|EEV07378.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279411|gb|EEV10006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282463|gb|EEV12596.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257285140|gb|EEV15257.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876]
 gi|257788249|gb|EEV26589.1| thymidylate kinase [Staphylococcus aureus A9781]
 gi|257841164|gb|EEV65613.1| thymidylate kinase [Staphylococcus aureus A9763]
 gi|257843220|gb|EEV67633.1| thymidylate kinase [Staphylococcus aureus A9719]
 gi|257849657|gb|EEV73624.1| thymidylate kinase [Staphylococcus aureus A9299]
 gi|257855108|gb|EEV78050.1| thymidylate kinase [Staphylococcus aureus A6300]
 gi|257858729|gb|EEV81602.1| thymidylate kinase [Staphylococcus aureus A6224]
 gi|257859523|gb|EEV82376.1| thymidylate kinase [Staphylococcus aureus A5948]
 gi|257863985|gb|EEV86740.1| thymidylate kinase [Staphylococcus aureus A5937]
 gi|282314532|gb|EFB44919.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101]
 gi|282322779|gb|EFB53099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899]
 gi|282325968|gb|EFB56274.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282328318|gb|EFB58592.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331974|gb|EFB61483.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282592459|gb|EFB97471.1| thymidylate kinase [Staphylococcus aureus A9765]
 gi|282596492|gb|EFC01452.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160]
 gi|282762506|gb|EFC02646.1| thymidylate kinase [Staphylococcus aureus A8117]
 gi|283791194|gb|EFC30004.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290921292|gb|EFD98350.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096318|gb|EFE26578.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467841|gb|EFF10351.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809]
          Length = 210

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 9   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 66  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|21282166|ref|NP_645254.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485346|ref|YP_042567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|23821762|sp|Q8NY05|KTHY_STAAW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56748991|sp|Q6GC06|KTHY_STAAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21203602|dbj|BAB94302.1| tmk [Staphylococcus aureus subsp. aureus MW2]
 gi|49243789|emb|CAG42214.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 205

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 4   FITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204


>gi|223939277|ref|ZP_03631158.1| dTMP kinase [bacterium Ellin514]
 gi|223892109|gb|EEF58589.1| dTMP kinase [bacterium Ellin514]
          Length = 213

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 10/220 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           M  GL ISFEG EG GK+T ISLL   L+   + + + REPGGTP  E  R+ L  S   
Sbjct: 1   MKKGLLISFEGTEGCGKSTQISLLTERLRALGHVIRMVREPGGTPIGEEIRYTLKHSVKN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +EAE ++  A+R   V  V+RPAL  G+I++CDR+ DS+ AYQG         + +
Sbjct: 61  HAMTSEAELLLMNASRAQLVREVLRPALEAGEIIVCDRYYDSTTAYQGYGRGLDLKLVQA 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +V +  PD T++L +P ++   R+ +R +       D  E  D     +  Q +  
Sbjct: 121 VIDFAVGDTRPDLTLLLRVPPEVSAARLASRQATL-PFIRDRIEEADQSFFNRVSQGYEA 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           +A   P+R   +D++ S Q+V+ +I    W     RV PL
Sbjct: 180 LATAHPERIQTIDASSSVQNVSDSI----W----SRVKPL 211


>gi|18978102|ref|NP_579459.1| thymidylate kinase [Pyrococcus furiosus DSM 3638]
 gi|23821777|sp|Q8U071|KTHY_PYRFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|18893897|gb|AAL81854.1| thymidylate kinase (tmk) [Pyrococcus furiosus DSM 3638]
          Length = 210

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 15/217 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI  EGI+G+GKTT   LL R+ +   + V +T+EP  T   +  R ++L   + 
Sbjct: 1   MKRGLFIVLEGIDGSGKTTQARLLARWFEDNGFKVVLTKEPTDTEFGKIIRKLVLEGSII 60

Query: 61  EFG---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           + G    EAEA++FAA R +HV+ +I PAL EGK+++ DR+  SS AYQ  R     L L
Sbjct: 61  DGGRISLEAEALLFAADRAEHVKKIIEPALREGKVVISDRYFYSSLAYQWARG----LNL 116

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L EI+     PD  I+LD+P   G+KR++ R S  E   L         + EK R+ +
Sbjct: 117 EWLIEINKFAPHPDIAILLDIPPREGIKRIKKRSSQTEFDKL-------FKLQEKVRENY 169

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +A+   D   I+D+  S + V   I++ + E+  K
Sbjct: 170 IKLAK-MFDEIKIIDATKSVEEVHREIISSIKEIWGK 205


>gi|330428264|gb|AEC19598.1| Thymidylate kinase [Pusillimonas sp. T7-7]
          Length = 216

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GL I  +G  GAGK T +  ++ FL     +V +TREPGGT   E  R +LL     
Sbjct: 1   MNKGLMIVVDGGNGAGKGTCLHDIEAFLSGLGLEVVMTREPGGTAIGEQIREILLDKSAV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++FAAAR  HV   I PA+  GK+++ DRF  ++ ++Q          ++SL
Sbjct: 61  EMCDVTELMLFAAARAQHVRQKIVPAINAGKVVVSDRFDSATISFQHYARGLDLELINSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+V  + PD TIILDL   +GL+RV +R S       D  E++++   E+ RQ ++  
Sbjct: 121 NDIAVAGLRPDFTIILDLDPAVGLQRVASRGS-----DFDRLEKENLSFLERARQGYIKQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A   P R   VD++ SF  V   +L +V +++ +
Sbjct: 176 ALADPQRFATVDASQSFDQVRHEVLQLVEQVIAR 209


>gi|325687059|gb|EGD29082.1| thymidylate kinase [Streptococcus sanguinis SK72]
          Length = 212

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVWPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|229094752|ref|ZP_04225758.1| Thymidylate kinase [Bacillus cereus Rock3-29]
 gi|229113705|ref|ZP_04243141.1| Thymidylate kinase [Bacillus cereus Rock1-3]
 gi|228669702|gb|EEL25108.1| Thymidylate kinase [Bacillus cereus Rock1-3]
 gi|228688620|gb|EEL42492.1| Thymidylate kinase [Bacillus cereus Rock3-29]
          Length = 208

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  +IGL R++     RE   LD    +D+  H++ R+ +L+
Sbjct: 119 INRFATEDCMPSVTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|300811154|ref|ZP_07091666.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497858|gb|EFK32868.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 212

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 12/206 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEG +GAGKTT I+ + + +Q +   ++ VTREPGG+  AE  R ++L     E 
Sbjct: 3   GYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AA+R  HV  +I PAL  G +++ DRF+DSS AYQG+    + L +D + +
Sbjct: 63  NAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQ---GRGLGIDEVAQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +   + PD TI LDL    GL R+    S  E    D  E++ +  HE+  + +  
Sbjct: 120 INAFATGYLEPDLTIFLDLDPAQGLARIAKVRSGSE----DRLEQEKLSFHEEVYRGYQK 175

Query: 180 IARNQPDRCHIVDSAHSF-QSVATNI 204
           + +  PDR  +VD++    Q VA ++
Sbjct: 176 VNQAHPDRVKVVDASQDLPQVVAASV 201


>gi|229027878|ref|ZP_04184033.1| Thymidylate kinase [Bacillus cereus AH1271]
 gi|228733392|gb|EEL84219.1| Thymidylate kinase [Bacillus cereus AH1271]
          Length = 208

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  +IGL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +VD+    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVDADQPMEKLIEEVVQII 203


>gi|325137927|gb|EGC60502.1| thymidylate kinase [Neisseria meningitidis ES14902]
          Length = 206

 Score =  124 bits (312), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  E  R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS      V  +I  ++
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200


>gi|15923472|ref|NP_371006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926159|ref|NP_373692.1| thymidylate kinase [Staphylococcus aureus subsp. aureus N315]
 gi|49482709|ref|YP_039933.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|57651363|ref|YP_185412.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL]
 gi|82750189|ref|YP_415930.1| thymidylate kinase [Staphylococcus aureus RF122]
 gi|87162349|ref|YP_493168.1| thymidylate kinase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194238|ref|YP_499030.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|148266940|ref|YP_001245883.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH9]
 gi|150392986|ref|YP_001315661.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1]
 gi|156978810|ref|YP_001441069.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu3]
 gi|221142326|ref|ZP_03566819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315924|ref|ZP_04839137.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253730948|ref|ZP_04865113.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|255005275|ref|ZP_05143876.2| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|262049967|ref|ZP_06022826.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30]
 gi|262052513|ref|ZP_06024710.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3]
 gi|269202101|ref|YP_003281370.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98]
 gi|284023491|ref|ZP_06377889.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 132]
 gi|294850341|ref|ZP_06791074.1| thymidylate kinase [Staphylococcus aureus A9754]
 gi|295407370|ref|ZP_06817167.1| thymidylate kinase [Staphylococcus aureus A8819]
 gi|295427016|ref|ZP_06819653.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296276563|ref|ZP_06859070.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246450|ref|ZP_06930290.1| thymidylate kinase [Staphylococcus aureus A8796]
 gi|54037703|sp|P65249|KTHY_STAAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|54041417|sp|P65248|KTHY_STAAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56749045|sp|Q6GJI9|KTHY_STAAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920829|sp|Q5HIJ5|KTHY_STAAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122540513|sp|Q2G230|KTHY_STAA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123487157|sp|Q2FJG0|KTHY_STAA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123548600|sp|Q2YVW3|KTHY_STAAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223118|sp|A7WYM2|KTHY_STAA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030842|sp|A6TYV6|KTHY_STAA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030843|sp|A5IQ34|KTHY_STAA9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|93279034|pdb|2CCJ|A Chain A, Crystal Structure Of S. Aureus Thymidylate Kinase
           Complexed With Thymidine Monophosphate
 gi|93279035|pdb|2CCJ|B Chain B, Crystal Structure Of S. Aureus Thymidylate Kinase
           Complexed With Thymidine Monophosphate
 gi|93279036|pdb|2CCK|A Chain A, Crystal Structure Of Unliganded S. Aureus Thymidylate
           Kinase
 gi|93279037|pdb|2CCK|B Chain B, Crystal Structure Of Unliganded S. Aureus Thymidylate
           Kinase
 gi|13700372|dbj|BAB41670.1| tmk [Staphylococcus aureus subsp. aureus N315]
 gi|14246250|dbj|BAB56644.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|49240838|emb|CAG39505.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|57285549|gb|AAW37643.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL]
 gi|82655720|emb|CAI80119.1| thymidylate kinase [Staphylococcus aureus RF122]
 gi|87128323|gb|ABD22837.1| thymidylate kinase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201796|gb|ABD29606.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147740009|gb|ABQ48307.1| thymidylate kinase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945438|gb|ABR51374.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1]
 gi|156720945|dbj|BAF77362.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253725298|gb|EES94027.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|259159560|gb|EEW44607.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3]
 gi|259161902|gb|EEW46485.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30]
 gi|262074391|gb|ACY10364.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98]
 gi|269940053|emb|CBI48429.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|283469774|emb|CAQ48985.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ST398]
 gi|285816181|gb|ADC36668.1| Thymidylate kinase [Staphylococcus aureus 04-02981]
 gi|294822765|gb|EFG39201.1| thymidylate kinase [Staphylococcus aureus A9754]
 gi|294967727|gb|EFG43759.1| thymidylate kinase [Staphylococcus aureus A8819]
 gi|295129019|gb|EFG58648.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297176637|gb|EFH35899.1| thymidylate kinase [Staphylococcus aureus A8796]
 gi|298693811|gb|ADI97033.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED133]
 gi|302750372|gb|ADL64549.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|312828977|emb|CBX33819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128606|gb|EFT84609.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315193841|gb|EFU24235.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315196161|gb|EFU26517.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS01]
 gi|323438403|gb|EGA96161.1| thymidylate kinase [Staphylococcus aureus O11]
 gi|323441265|gb|EGA98936.1| thymidylate kinase [Staphylococcus aureus O46]
 gi|329313200|gb|AEB87613.1| Thymidylate kinase [Staphylococcus aureus subsp. aureus T0131]
 gi|329725071|gb|EGG61566.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21172]
 gi|329729774|gb|EGG66171.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21189]
 gi|329731077|gb|EGG67449.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21193]
          Length = 205

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 4   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204


>gi|93279032|pdb|2CCG|A Chain A, Crystal Structure Of His-Tagged S. Aureus Thymidylate
           Kinase Complexed With Thymidine Monophosphate (Tmp)
 gi|93279033|pdb|2CCG|B Chain B, Crystal Structure Of His-Tagged S. Aureus Thymidylate
           Kinase Complexed With Thymidine Monophosphate (Tmp)
          Length = 225

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 24  FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 80

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 81  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 140

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 141 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 195

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 196 QRFKSVNADQPLENVVEDTYQTIIKYLEK 224


>gi|324991362|gb|EGC23295.1| thymidylate kinase [Streptococcus sanguinis SK353]
          Length = 212

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|255065851|ref|ZP_05317706.1| dTMP kinase [Neisseria sicca ATCC 29256]
 gi|255049762|gb|EET45226.1| dTMP kinase [Neisseria sicca ATCC 29256]
          Length = 208

 Score =  124 bits (312), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T++++++R+ +  +  V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIRRWFESHDLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR  H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARQQHLEDVILPALADGIHVVSDRFTDATFAYQGGGRGVPLQDIEMLENWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T++LD+P+++ + R+      RE    D FE++      + R ++L+ A   P
Sbjct: 124 GGFGPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFTRVRAVYLERAAAHP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D   S + V  +I
Sbjct: 178 ERYALIDGNRSLEEVRADI 196


>gi|229159205|ref|ZP_04287230.1| Thymidylate kinase [Bacillus cereus R309803]
 gi|228624220|gb|EEK81021.1| Thymidylate kinase [Bacillus cereus R309803]
          Length = 208

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +     DR  +V++    + +   ++ I+ E
Sbjct: 175 VVERFSDRIVVVNADQPMEQLIEEVVQIIEE 205


>gi|146318315|ref|YP_001198027.1| thymidylate kinase [Streptococcus suis 05ZYH33]
 gi|145689121|gb|ABP89627.1| Thymidylate kinase [Streptococcus suis 05ZYH33]
 gi|292558109|gb|ADE31110.1| Thymidylate kinase [Streptococcus suis GZ1]
          Length = 222

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 118/216 (54%), Gaps = 4/216 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEG +GAGKTT +  L   LQ    +V  TREPGG   AE  R+++L+    
Sbjct: 11  MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++F AAR  H++  I P L +GK+LL DRF+DSS AYQG         +  L
Sbjct: 71  AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+  R + R+   LD  E+ D  +H + RQ +L I
Sbjct: 131 NQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD--MHRRVRQGYLSI 186

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              +P+R   +D++   ++V  N L ++ +   +R 
Sbjct: 187 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAERT 222


>gi|332109434|gb|EGJ10357.1| thymidylate kinase / thymidylate synthase [Rubrivivax
           benzoatilyticus JA2]
          Length = 205

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 9/204 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G F+SFEGI+GAGK++HI  L  +L+ +  +V VTREPGGT  AE  R ++L   +D
Sbjct: 1   MTAGRFLSFEGIDGAGKSSHIEWLAGWLRERGREVLVTREPGGTELAERLRELVLHQPMD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA++  AAR DH+   I PAL  G ++LCDRF D+++AYQG         L +L
Sbjct: 61  ---ALTEALLVFAARRDHLATRIEPALAAGAVVLCDRFTDATFAYQGAGRGFDLGVLATL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +    Q   PD T+  DLP                    D FE +D    E+ R  +   
Sbjct: 118 ETWVQQGRQPDLTVWFDLPT------AVAAARRAAVRAPDRFESQDEAFFERVRSGYARR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A   P R  I+D+A +  +V   +
Sbjct: 172 AAADPGRFVILDAAATPDAVRAQL 195


>gi|125718521|ref|YP_001035654.1| thymidylate kinase [Streptococcus sanguinis SK36]
 gi|166223121|sp|A3CPJ9|KTHY_STRSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|125498438|gb|ABN45104.1| Thymidylate kinase, putative [Streptococcus sanguinis SK36]
          Length = 212

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|118602262|ref|YP_903477.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166223114|sp|A1AVP9|KTHY_RUTMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118567201|gb|ABL02006.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 205

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 113/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ +G+EG+GK+T I  +  +L  K  +V +TREPGGT   E  R +LLS  + 
Sbjct: 1   MQRGKFITIDGVEGSGKSTQIDFICDYLVTKKINVILTREPGGTELGEKIRTLLLSTDIQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++  AAR +H+   I P+L +G  +L DRF D+SYAYQG         +  L
Sbjct: 61  SIHGDTELLLLFAARNEHIRTKIIPSLEKGDWVLSDRFTDASYAYQGGGRGLSIERITQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++  +Q+  PD T++LD+ V +G+ RV++  R    E    D+F+R         R  ++
Sbjct: 121 EKWVLQDFTPDVTLLLDVSVALGMSRVESRGRKDRIELETNDFFKRV--------RNSYI 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           + ++  P R  ++D++ + +  A  I
Sbjct: 173 ERSKQFPKRIKLIDASKTLEQTAQQI 198


>gi|322515570|ref|ZP_08068551.1| dTMP kinase [Actinobacillus ureae ATCC 25976]
 gi|322118373|gb|EFX90639.1| dTMP kinase [Actinobacillus ureae ATCC 25976]
          Length = 208

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 13/208 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGKTT   ++   L++   +V   REPGGTP AE  RH++     +   
Sbjct: 3   GKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQIREPGGTPLAEKLRHLIKHETEEAVS 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
            +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQ G R   +HL L++L+E
Sbjct: 63  DKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHL-LETLKE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
             + +  PD TI LD+   IGL R   R  L   E   LD+F R         RQ +L++
Sbjct: 122 TVLGKFEPDLTIYLDIDPAIGLARAIGRGELDRIEQQSLDFFYRT--------RQRYLEL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +N  ++  I+++  S + VA +I   V
Sbjct: 174 TQNN-EKAVIINAEQSIEQVAADIQQAV 200


>gi|227533730|ref|ZP_03963779.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227188714|gb|EEI68781.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 238

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 4/201 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI+FEG +GAGKT+ + +L+ +  Q     +H+TREPGG   +E  R V+L    
Sbjct: 24  MVKGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPAN 83

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AA+R  H+  VI+PAL +G I++CDRF+DSS AYQG         +  
Sbjct: 84  TAMDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLK 143

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +   + P  T+ LD+PV +GL R+++  + R+    D  +++ +  HE+    ++ 
Sbjct: 144 MNQFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQ---YDRLDQESLAFHERVHDAYMT 200

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +  + P R   +D+    + V
Sbjct: 201 LIVDNPQRIVSIDATEPLEKV 221


>gi|313891237|ref|ZP_07824855.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120304|gb|EFR43425.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 209

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 113/213 (53%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ G  I+FEG +GAGKT+ I  L   L+  N  ++ VTREPGG   AE+ R V+L    
Sbjct: 1   MSKGRLITFEGPDGAGKTSVIEGLVPLLENLNQTEIVVTREPGGVSIAESIREVILDVRN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL +G+++L DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEQGQMVLIDRFIDSSVAYQGAGRGLSKKAIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +   V PD T+  DL  +IGL R+      RE   LD    + + +H++ R  +L+
Sbjct: 121 LNDFATDGVTPDLTLYFDLSPEIGLARIAKNKK-REINRLDM---EKIEMHQQVRNGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  PDR   VD+  S   V      I+ E V
Sbjct: 177 LAKEFPDRIVTVDATKSLDEVVAQAFEIIKENV 209


>gi|222152616|ref|YP_002561791.1| thymidylate kinase [Streptococcus uberis 0140J]
 gi|254808308|sp|B9DTV7|KTHY_STRU0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|222113427|emb|CAR41106.1| thymidylate kinase [Streptococcus uberis 0140J]
          Length = 211

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+ EG +GAGKT+ +  L   L++ N   +  TREPGG   +E+ R+++L    
Sbjct: 1   MTKGKIITLEGPDGAGKTSVLEQLVLKLEKDNEQSIVTTREPGGVAISESIRNIILDVNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E   + E +++ AAR  H+   + P+L  GK++  DRF+DSS AYQGE        ++ 
Sbjct: 61  TEMDFKTELLLYIAARRQHLVEKVLPSLSAGKLVFIDRFIDSSVAYQGEGRGLNKSDIEW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +   + PD T++ D+P +IG+ R+ N+   RE   LD    + + +H+K RQ +L+
Sbjct: 121 LNDFATDGIKPDLTLLFDVPSEIGIARI-NQNVNREINRLDL---EKLEMHQKVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +A+  PDR  ++D++     V      ++ E
Sbjct: 177 LAKANPDRIVLIDASKPLDDVVDEAYRVIKE 207


>gi|86608314|ref|YP_477076.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123503195|sp|Q2JN62|KTHY_SYNJB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|86556856|gb|ABD01813.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 206

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 115/217 (52%), Gaps = 16/217 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EG GKTT  +LL   L+++ Y    TREPGGT   +  R +LL    D F  
Sbjct: 1   MFITLEGGEGVGKTTQQALLVERLRQEGYACLCTREPGGTALGKTLRELLLHG--DPFSP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++AA R +HV  VI PAL  G++++CDRF DS+ AYQG         +  L  ++
Sbjct: 59  LAELLLYAADRAEHVSKVIAPALAAGQVVVCDRFTDSTLAYQGYGRGLDLEKIRQLNHLA 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P  T+ LDLP ++GL R + R         D  E++ +  H +  Q F  +A  +
Sbjct: 119 TGGLQPHLTLWLDLPPEVGLARAKAR---------DRLEQERLEFHRRVYQGFQALAAAE 169

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           P R   + +  S   VA  +    W +V+ R+ PL++
Sbjct: 170 PQRIVRISAQGSPAEVAARL----WSVVEPRL-PLAT 201


>gi|253751477|ref|YP_003024618.1| thymidylate kinase [Streptococcus suis SC84]
 gi|253753378|ref|YP_003026519.1| thymidylate kinase [Streptococcus suis P1/7]
 gi|253755793|ref|YP_003028933.1| thymidylate kinase [Streptococcus suis BM407]
 gi|251815766|emb|CAZ51368.1| thymidylate kinase [Streptococcus suis SC84]
 gi|251818257|emb|CAZ56065.1| thymidylate kinase [Streptococcus suis BM407]
 gi|251819624|emb|CAR45362.1| thymidylate kinase [Streptococcus suis P1/7]
 gi|319757895|gb|ADV69837.1| thymidylate kinase [Streptococcus suis JS14]
          Length = 212

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 118/216 (54%), Gaps = 4/216 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEG +GAGKTT +  L   LQ    +V  TREPGG   AE  R+++L+    
Sbjct: 1   MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++F AAR  H++  I P L +GK+LL DRF+DSS AYQG         +  L
Sbjct: 61  AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+  R + R+   LD  E+ D  +H + RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD--MHRRVRQGYLSI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              +P+R   +D++   ++V  N L ++ +   +R 
Sbjct: 177 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAERT 212


>gi|242371688|ref|ZP_04817262.1| dTMP kinase [Staphylococcus epidermidis M23864:W1]
 gi|242350637|gb|EES42238.1| dTMP kinase [Staphylococcus epidermidis M23864:W1]
          Length = 208

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 114/195 (58%), Gaps = 8/195 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ I+ + + L  +++DV  TREPGG P  E  R V+L    D     
Sbjct: 7   FITFEGPEGAGKTSVITKVSQKLA-EDFDVITTREPGGVPTGEEIRRVVLDG--DNMDIR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL +GKI+LCDR++DSS AYQG         + +L E ++
Sbjct: 64  TEAMLFAASRREHLVEKVIPALKDGKIVLCDRYIDSSLAYQGYARGIGIEEVQTLNEFAI 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+ +   +  +++D   HEK  + +  +    P
Sbjct: 124 NGLYPDLTIYLDVSAEVGRQRI-----LKNNRDQNRLDQEDKAFHEKVIEGYHKVIEGNP 178

Query: 186 DRCHIVDSAHSFQSV 200
           +R   V++  + ++V
Sbjct: 179 ERFVKVNANQNLENV 193


>gi|116495711|ref|YP_807445.1| thymidylate kinase [Lactobacillus casei ATCC 334]
 gi|191639199|ref|YP_001988365.1| thymidylate kinase [Lactobacillus casei BL23]
 gi|122262887|sp|Q035W9|KTHY_LACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238693006|sp|B3W9Y8|KTHY_LACCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116105861|gb|ABJ71003.1| thymidylate kinase [Lactobacillus casei ATCC 334]
 gi|190713501|emb|CAQ67507.1| Thymidylate kinase (dTMP kinase) [Lactobacillus casei BL23]
 gi|327383275|gb|AEA54751.1| Thymidylate kinase [Lactobacillus casei LC2W]
 gi|327386459|gb|AEA57933.1| Thymidylate kinase [Lactobacillus casei BD-II]
          Length = 214

 Score =  124 bits (311), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 4/199 (2%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ + +L+ +  Q     +H+TREPGG   +E  R V+L      
Sbjct: 2   TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL +G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + P  T+ LD+PV +GL R+++  + R+    D  +++ +  HE+    ++ + 
Sbjct: 122 QFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQ---YDRLDQESLAFHERVHDAYMTLI 178

Query: 182 RNQPDRCHIVDSAHSFQSV 200
            + P R   +D+    + V
Sbjct: 179 VDNPQRIVSIDATEPLEKV 197


>gi|162147582|ref|YP_001602043.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209542215|ref|YP_002274444.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786159|emb|CAP55741.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209529892|gb|ACI49829.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 215

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 111/209 (53%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+FEG EGAGK+T    L+  L+    +V  TREPGGTP AEA R +LL  G D  
Sbjct: 2   AGLFITFEGGEGAGKSTQAQRLEAHLRAAGREVVRTREPGGTPGAEALRQLLLFGGHD-L 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDS 119
              AE +   AAR DHV+ +IRPAL  G +++CDRF+DS+ AYQG    R     L L +
Sbjct: 61  SLRAEILAHFAARCDHVDQLIRPALARGAVVICDRFIDSTLAYQGYGLGRADPGILHLIA 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +    V  + PD T++L L     L R++ R         D +E  D   H +    F  
Sbjct: 121 VLGAQVG-LAPDLTLVLMLERAGALARLRAR-----GGPADRYEAADEAFHARVADGFDT 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           IAR +  RC  + +      VA +I  +V
Sbjct: 175 IARAEAGRCVTIAADRPVDVVAGDIARLV 203


>gi|329666793|gb|AEB92741.1| thymidylate kinase [Lactobacillus johnsonii DPC 6026]
          Length = 213

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKTT I+ ++K+  Q       VTREPGG+  +E  R ++L     E 
Sbjct: 3   GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPKNKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG     ++L ++ +++
Sbjct: 63  DDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQG---VGRNLGVEEVKQ 119

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+      + P+ TI LDL   +GL R++   + +E    D  E++ +  H K    + +
Sbjct: 120 INDFGTGGLEPNLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    PDR   VD+    + VA N + I+
Sbjct: 176 LLERYPDRIKKVDANLPIKDVAANSVKII 204


>gi|325690660|gb|EGD32661.1| thymidylate kinase [Streptococcus sanguinis SK115]
          Length = 212

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|297193021|ref|ZP_06910419.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719849|gb|EDY63757.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 1039

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 520 SGFFIAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 579

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++VIRPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 580 SNRAEALLYAADRAEHVDSVIRPALDRGAIVISDRYIDSSVAYQGAGRDLSPTEIARISR 639

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 640 WATDGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRSGFLTLAA 691

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+     SV T
Sbjct: 692 ADPGRYLVVDAGQEPGSVTT 711


>gi|229074092|ref|ZP_04207139.1| Thymidylate kinase [Bacillus cereus Rock4-18]
 gi|228708986|gb|EEL61112.1| Thymidylate kinase [Bacillus cereus Rock4-18]
          Length = 208

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 ISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I++   ++ MP  TI LD+  +IGL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INLFATEDCMPSVTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|325912933|ref|ZP_08175307.1| dTMP kinase [Lactobacillus iners UPII 60-B]
 gi|325477747|gb|EGC80885.1| dTMP kinase [Lactobacillus iners UPII 60-B]
          Length = 213

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E 
Sbjct: 3   GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG     + L +D +++
Sbjct: 63  NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + + + PD TI  D+    GL+R+Q      E    D  E+++ + H+K    +  
Sbjct: 120 INEFATRHITPDLTIFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    P+R   VD+  S   V +  + I+ E +
Sbjct: 176 LLSAYPERIKRVDAELSIAEVVSQSVKILEEYM 208


>gi|307729688|ref|YP_003906912.1| thymidylate kinase [Burkholderia sp. CCGE1003]
 gi|307584223|gb|ADN57621.1| thymidylate kinase [Burkholderia sp. CCGE1003]
          Length = 206

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R   R + R+    D FER+     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFERESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  I+DS+ S   +   + +++ +L
Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEDLLAKL 206


>gi|227510683|ref|ZP_03940732.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189804|gb|EEI69871.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 216

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ ++ +F ++    + VTREPGG   +E  R V+L     E
Sbjct: 2   TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL   K++LCDR++DSS AYQG         +  + 
Sbjct: 62  MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + ++++P  TI  D+PV++GL R+      R+S+ +D  + +    H++  Q ++ + 
Sbjct: 122 EFATEKILPYKTIYFDIPVEVGLNRIAKH---RDSSKIDRLDVETTAFHKRVHQGYMKLI 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               DR  I+D+    + V  +  +++ ++
Sbjct: 179 GEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208


>gi|313900951|ref|ZP_07834441.1| dTMP kinase [Clostridium sp. HGF2]
 gi|312954371|gb|EFR36049.1| dTMP kinase [Clostridium sp. HGF2]
          Length = 210

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 113/216 (52%), Gaps = 6/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLFI+FEG +G+GKTT   L    L+   Y V  TREPGG   AE  R ++L     
Sbjct: 1   MNKGLFITFEGNDGSGKTTISKLAYEKLKEMGYPVLYTREPGGIDIAEQIRSIILDPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AA+R  H+   + PAL EGKI+LCDRF+DSS  YQG         + ++
Sbjct: 61  AMDERCEALLYAASRRQHLIEKVLPALKEGKIVLCDRFVDSSLVYQGIARGIGVEEVFAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +++  +PD T+ L +  + GL RV +R         D  + + +  H+   Q +  I
Sbjct: 121 NQFAIEGHLPDATVFLSVDFETGLSRVTSR------GNKDRLDNESMEFHKLVAQGYELI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                +R HIVD+     +V  N +  + E+++  V
Sbjct: 175 KDKFKERMHIVDANPDVDTVLNNTVACLMEIIKNHV 210


>gi|324993714|gb|EGC25633.1| thymidylate kinase [Streptococcus sanguinis SK405]
 gi|324994973|gb|EGC26886.1| thymidylate kinase [Streptococcus sanguinis SK678]
 gi|327462985|gb|EGF09306.1| thymidylate kinase [Streptococcus sanguinis SK1]
 gi|327474588|gb|EGF19993.1| thymidylate kinase [Streptococcus sanguinis SK408]
          Length = 212

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GKI+L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVTDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+  R   RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA-RSESREVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|239630116|ref|ZP_04673147.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067265|ref|YP_003789288.1| thymidylate kinase [Lactobacillus casei str. Zhang]
 gi|239527728|gb|EEQ66729.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439672|gb|ADK19438.1| Thymidylate kinase [Lactobacillus casei str. Zhang]
          Length = 214

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 4/199 (2%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ + +L+ +  Q     +H+TREPGG   +E  R V+L      
Sbjct: 2   TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL +G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + P  T+ LD+PV +GL R+++  + R+    D  +++ +  HE+    ++ + 
Sbjct: 122 QFATAGLEPALTLYLDVPVQMGLDRIKSHQNERQ---YDRLDQESLAFHERVHDAYMTLI 178

Query: 182 RNQPDRCHIVDSAHSFQSV 200
            + P R   +D+    + V
Sbjct: 179 VDNPQRIVSIDATEPLEKV 197


>gi|326772517|ref|ZP_08231801.1| dTMP kinase [Actinomyces viscosus C505]
 gi|326637149|gb|EGE38051.1| dTMP kinase [Actinomyces viscosus C505]
          Length = 269

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 8/213 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFISFEG +G GKTT I +L   L   + D  +TREPGGT      R +LL  G   
Sbjct: 26  GPGLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTELGVEIRRLLLHGG--H 83

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R  H+   +RPAL  G ++L DR+LDSS AYQG   S     +  L 
Sbjct: 84  VAPRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLS 143

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + ++PD T++LD   D+  +R   R         D  E++        R+ FL +A
Sbjct: 144 LWATEGLLPDLTVLLDGDPDLAERRTTGR------GAKDRLEQEGDAFRVALREQFLTLA 197

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +P+R  +VD+      VA +++  V   V++
Sbjct: 198 EGEPERFVVVDADRPVDQVADDVIEAVVAAVRR 230


>gi|312864169|ref|ZP_07724403.1| dTMP kinase [Streptococcus vestibularis F0396]
 gi|322517269|ref|ZP_08070148.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124]
 gi|311100170|gb|EFQ58379.1| dTMP kinase [Streptococcus vestibularis F0396]
 gi|322124175|gb|EFX95709.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124]
          Length = 209

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKTT + +LL R  +     V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTTVLEALLPRLREAYPAKVVTTREPGGVAIAEQIREVILDVNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L EG +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVERVLPELEEGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GL R+      RE   LD  E+ D  +H++ RQ +LD
Sbjct: 121 LNAYATDGYKPDVTLLFDVDSETGLARIAANGE-REVNRLD-LEKLD--LHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A+ +P+R  I+D++ +F+ V      ++
Sbjct: 177 LAQAEPERIKIIDASQAFEDVVEEAWKVI 205


>gi|323490969|ref|ZP_08096163.1| thymidylate kinase [Planococcus donghaensis MPA1U2]
 gi|323395325|gb|EGA88177.1| thymidylate kinase [Planococcus donghaensis MPA1U2]
          Length = 216

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 4/214 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG EG+GK+T + +L   L  K + V  TREPGG   AE  R V+L+       
Sbjct: 2   GYLINLEGGEGSGKSTVLKMLAEALTEKGFSVVCTREPGGIDIAEQIREVILNRENTAMD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AAAR  H+   I PAL  G I+LCDR++DSS AYQG         + ++ + 
Sbjct: 62  ARTEALLYAAARRQHLVEKIIPALETGSIVLCDRYIDSSLAYQGYARGLGMEEIFAINKF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ E MPD T+  D+   +GL R++ + + RE   LD    + +  H K R+ +L +   
Sbjct: 122 AIDEYMPDLTLYFDVNPKVGLARIE-KDAGREVNRLDV---ESMKFHYKVREGYLLLLSK 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            P+R  +V++ +    V T+ L      +++R S
Sbjct: 178 NPERIRLVNAENELPIVFTDALETAVRFIEERQS 211


>gi|313201192|ref|YP_004039850.1| thymidylate kinase [Methylovorus sp. MP688]
 gi|312440508|gb|ADQ84614.1| thymidylate kinase [Methylovorus sp. MP688]
          Length = 201

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 13/199 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+THI  +   LQ +  +V  TREPGGT   E  R VLL   +    
Sbjct: 3   GKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLHTPM---A 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121
           AE E+++  AAR +H+  +I PAL  G  +L DRF D+S+AYQ  G   +S+   +  L+
Sbjct: 60  AETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLASER--IAQLE 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   Q + PD T++ D+PV++ ++R      L  +   D FER+      + R+ +LD A
Sbjct: 118 QWVQQGLQPDLTLLFDVPVEVSVQR------LAAARTPDKFERESADFFRRIRRAYLDRA 171

Query: 182 RNQPDRCHIVDSAHSFQSV 200
           +  P+R  I+DS    + V
Sbjct: 172 QQFPERFRIIDSNQPLEQV 190


>gi|261364212|ref|ZP_05977095.1| dTMP kinase [Neisseria mucosa ATCC 25996]
 gi|288567825|gb|EFC89385.1| dTMP kinase [Neisseria mucosa ATCC 25996]
          Length = 208

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 117/199 (58%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T++++++++ +  +  V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIRQWFESHHLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR  H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARQQHLEDVILPALADGVHVVSDRFTDATFAYQGGGRGVPLQDIEMLENWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T++LD+P+++ + R+      RE    D FE++      + R ++L+ A   P
Sbjct: 124 GGFGPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFTRVRAVYLERAAAHP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++DS  S + V  +I
Sbjct: 178 ERYALIDSNRSLEEVRADI 196


>gi|189183417|ref|YP_001937202.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda]
 gi|238692237|sp|B3CR61|KTHY_ORITI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189180188|dbj|BAG39968.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda]
          Length = 217

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 4/205 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GKTT   LL   L         TRE GGT  AE  R ++L     +  
Sbjct: 7   GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR +H+E  IRP L EGK ++CDRF+DS+  YQ E    Q L L+ L   
Sbjct: 64  ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSENSEEQQLILE-LHRK 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T+I+++   I ++R++ R   + +  L+ F+ ++   H+K    F+ +++ 
Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDSRNQQFHQKITDAFIQVSKL 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+R   ++     + V++ ++NI+
Sbjct: 183 FPERIVQINGEPMIEDVSSEVINII 207


>gi|284028576|ref|YP_003378507.1| thymidylate kinase [Kribbella flavida DSM 17836]
 gi|283807869|gb|ADB29708.1| thymidylate kinase [Kribbella flavida DSM 17836]
          Length = 661

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 121/221 (54%), Gaps = 17/221 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFI+FEG EGAGK+T  +LL ++L+ +   V +TREPG T   +  R ++L     +
Sbjct: 456 TTGLFIAFEGGEGAGKSTQSALLVKWLEERGQHVLLTREPGATDLGKTLRQIVLDPATGD 515

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA + +HV++VI+PAL  G +++ DR++DS+ AYQG         ++ + 
Sbjct: 516 ISHRAEALIYAADKAEHVDSVIKPALKAGTVVITDRYVDSALAYQGSGRDLDLADVERVN 575

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +  ++ P+ TI+LDLP   GL R + R         D  E +    HE+ R  FL++A
Sbjct: 576 RWATDDLRPNLTILLDLPPKSGLGRFEER---------DRIEAQSADFHERVRAAFLELA 626

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             +P    ++D+    + +A  I        Q R+ P+  K
Sbjct: 627 AAEPQHYLVLDATQDREQLAAQI--------QARLLPMLPK 659


>gi|329766836|ref|ZP_08258365.1| thymidylate kinase [Gemella haemolysans M341]
 gi|328838562|gb|EGF88168.1| thymidylate kinase [Gemella haemolysans M341]
          Length = 208

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 120/208 (57%), Gaps = 13/208 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG +G+GKT+ I+    +L RK Y V  TREPGGT  +E  R +L     D   
Sbjct: 3   GKFITVEGSDGSGKTSFINFATEYLTRKGYKVITTREPGGTDFSEKVRELLFDSSND-ID 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
           A+ E+++F A+R DH+   I P + EG I++CDRF+DSS AYQ   R  S+   LD +  
Sbjct: 62  AKTESLLFCASRRDHIVKKILPHVNEGYIVICDRFVDSSVAYQSYGRGLSKQDILD-INA 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +   + PD T+   + V++GL R +NR   +  +   LD++  K+V      ++ + D+
Sbjct: 121 YATDNLEPDLTLYFSVDVEVGLARTKNRDDNNRMDQESLDFY--KNV------KRGYDDL 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++   +R  ++D++ ++++V    L+I+
Sbjct: 173 SKENTERIKVIDASDTYENVQKQALSIL 200


>gi|253999090|ref|YP_003051153.1| thymidylate kinase [Methylovorus sp. SIP3-4]
 gi|253985769|gb|ACT50626.1| thymidylate kinase [Methylovorus sp. SIP3-4]
          Length = 201

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 11/198 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+THI  +   LQ +  +V  TREPGGT   E  R VLL   +    
Sbjct: 3   GKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLHTPM---A 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
           AE E+++  AAR +H+  +I PAL  G  +L DRF D+S+AYQ G R  +    +  L++
Sbjct: 60  AETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLAAER-IAQLEQ 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              Q + PD T++ D+PV++ ++R      L  +   D FER+      + R+ +LD A+
Sbjct: 119 WVQQGLQPDLTLLFDVPVEVSVQR------LAAARTPDKFERESADFFRRIRRAYLDRAQ 172

Query: 183 NQPDRCHIVDSAHSFQSV 200
             P+R  I+DS    + V
Sbjct: 173 QFPERFRIIDSNQPLEQV 190


>gi|309806674|ref|ZP_07700670.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b]
 gi|308166979|gb|EFO69162.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b]
          Length = 213

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 11/211 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R+++L     E 
Sbjct: 3   GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG     + L +D +++
Sbjct: 63  NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  
Sbjct: 120 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +    P+R   VD+  S   V +  + I+ E
Sbjct: 176 LLSAYPERIKRVDAELSIAEVVSQSVKILEE 206


>gi|259047401|ref|ZP_05737802.1| dTMP kinase [Granulicatella adiacens ATCC 49175]
 gi|259035592|gb|EEW36847.1| dTMP kinase [Granulicatella adiacens ATCC 49175]
          Length = 215

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 4/208 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           GLFI+ EG +GAGKTT I+ L   LQ+    D+  TREPGG+  AE  R V+L     E 
Sbjct: 3   GLFITMEGPDGAGKTTVINQLIPLLQKHALVDIVSTREPGGSRIAEDIRKVILDVNNTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EAI++AA R  H+++ I P L +G I+ CDRF+DSS  YQG         +  L  
Sbjct: 63  DERTEAILYAAGRRQHLKDRILPNLEKGNIVFCDRFVDSSLVYQGVARGIGVEEVAELNR 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + P  T+ LD+P ++GL+R+   +  R +   D  +++ +  H   R+ +L++ +
Sbjct: 123 FATDGLSPSTTLYLDVPAEVGLERI---HKARGNRQFDRLDQEGLSFHTMVREGYLELLK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P+R   +D+  + + V      ++ E
Sbjct: 180 KYPERMVSIDATQTIEEVVNECFKVLVE 207


>gi|117925167|ref|YP_865784.1| thymidylate kinase [Magnetococcus sp. MC-1]
 gi|171460782|sp|A0L8T5|KTHY_MAGSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|117608923|gb|ABK44378.1| thymidylate kinase [Magnetococcus sp. MC-1]
          Length = 210

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 9/212 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I+ L + LQ     V  TREPGG P +E  R +L++   D+  
Sbjct: 3   GRFITFEGGEGAGKSTQIAQLTQSLQAHGVKVLCTREPGGCPISERIREILVTGQGDDLD 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +E ++  AAR +H+  VIRPAL  G  +LCDRF DS+ AYQG        +L  L + 
Sbjct: 63  GTSELLLILAARHEHIRQVIRPALASGHWVLCDRFEDSTLAYQGGGRGGDGPWLRQLGQW 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              +V PD T++LDL   +GL R     S R       FE++ +  H++ RQ FL +A+ 
Sbjct: 123 IRGDVFPDLTLLLDLDPTVGLAR-----SKRRGGQEQRFEQEALSFHQQVRQAFLQMAQQ 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +P R   +D+    Q VA  I    W  V+ R
Sbjct: 178 EPQRMIPIDADQPVQMVAATI----WREVEGR 205


>gi|291278502|ref|YP_003495337.1| dTMP kinase [Deferribacter desulfuricans SSM1]
 gi|290753204|dbj|BAI79581.1| dTMP kinase [Deferribacter desulfuricans SSM1]
          Length = 215

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 119/213 (55%), Gaps = 8/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +    F+  +GI+G GKTT   LLK +L     ++ +T+EPGGT      R++L+S   D
Sbjct: 4   IKKSFFLVIDGIDGCGKTTQCKLLKEYLNNIGLNILLTKEPGGTKTGTILRNILISTDYD 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++++A RL+H + +I P L  GK ++CDRF+ S+YAYQ      +  FL  L
Sbjct: 64  -IEPNTELLLYSADRLEHQKKIIIPGLNSGKTIICDRFISSTYAYQIFARGLEKSFLQYL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD---YFERKDVMIHEKRRQIF 177
           ++ +V +  PD TII+DLPV+I L+R   R  L++  C +    FE+  +  ++K R+ F
Sbjct: 123 EQHTVFK-WPDLTIIIDLPVEIALERALKR--LKDQNCENSEGKFEKNGIDFYKKVREGF 179

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           L  ++N  +   +++      S+   I +IV E
Sbjct: 180 LWYSKNYKN-VKVINGDRDIDSLFKEIKSIVNE 211


>gi|187923929|ref|YP_001895571.1| thymidylate kinase [Burkholderia phytofirmans PsJN]
 gi|229470188|sp|B2T436|KTHY_BURPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187715123|gb|ACD16347.1| dTMP kinase [Burkholderia phytofirmans PsJN]
          Length = 206

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 111/212 (52%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+S  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R   R + R+    D FE + V    + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFESESVAFFNRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DSA S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIVQIQRKLEELI 203


>gi|226309662|ref|YP_002769556.1| thymidylate kinase [Brevibacillus brevis NBRC 100599]
 gi|226092610|dbj|BAH41052.1| thymidylate kinase [Brevibacillus brevis NBRC 100599]
          Length = 213

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 10/212 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG EGAGK+T I+ L   L+ +  DV +TREPGG   AE  R ++L+    +
Sbjct: 7   KKGRFITIEGGEGAGKSTVIAKLYEELKTRGVDVLLTREPGGIDIAEKIREIILNPAHTQ 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL EGK++LCDRF+DSS AYQG    ++ L +D++ 
Sbjct: 67  MDERTEALLYAAARGQHLAEKVLPALAEGKLVLCDRFIDSSLAYQGH---ARGLGIDAVY 123

Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +I   +V + MP+ T+  D+  + GL R+ N    RE   LD    + +  HE  R+ + 
Sbjct: 124 QINRFAVGDCMPELTLFFDVQPETGLARI-NASRGREVNRLDL---EGMRFHELVREGYQ 179

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +    P+R  ++D+    + V  + L  + +
Sbjct: 180 LVMERDPERFVVIDAEQPMEQVYQSALQALLD 211


>gi|309810854|ref|ZP_07704655.1| dTMP kinase [Dermacoccus sp. Ellin185]
 gi|308435160|gb|EFP58991.1| dTMP kinase [Dermacoccus sp. Ellin185]
          Length = 268

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 118/213 (55%), Gaps = 14/213 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEG +GAGKTT I     +L+    +V +TREPGGTP     R +LL    D+  
Sbjct: 56  GLFVTFEGGDGAGKTTQIERAAAWLRELGREVVITREPGGTPLGVEIRRLLLHG--DDVA 113

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           + AEA+++AA R  HVE ++RPAL  G ++L DR++DSS AYQG   + + L  D ++ I
Sbjct: 114 SRAEALLYAADRAHHVETLVRPALARGAVVLQDRYIDSSIAYQG---AGRALAADDVESI 170

Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S    + + PD T+++D+  ++  +R   R         D  ER+    H + R+ FL +
Sbjct: 171 SRWATRGLTPDVTVLIDVSPEVARERRGAR------GAEDRLEREADDFHTRVREHFLRL 224

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A     R  ++D+  S   +   +   + +L++
Sbjct: 225 AARDEARYLVLDAGRSRDDLTAAVRTRLEQLLE 257


>gi|295099397|emb|CBK88486.1| thymidylate kinase [Eubacterium cylindroides T2-87]
          Length = 210

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+F++FEG +G+GKTT    +   L++  YDV  TREPGG+  AE+ R++LL     
Sbjct: 1   MKQGVFLTFEGNDGSGKTTVCKAICEELKKLGYDVVYTREPGGSKIAESIRNILLDVENT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119
                 EA+++AA+R  H+++ + PAL    I+LCDRF+DSS AYQG  RD       D 
Sbjct: 61  GMDPRTEALLYAASRRQHLKDRVLPALKNKSIVLCDRFVDSSLAYQGYARDLGMQEVYD- 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLDYFERKDVMIHEKRR 174
           + + ++   MP  T  L + ++ G KR+     +NR  L +S             H+K R
Sbjct: 120 INQFAIDGCMPIKTFFLSVSIETGQKRMDLRGDKNRLDLEQSD-----------FHKKVR 168

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +  +    P+R  ++D+    + V  N LN V +++ +
Sbjct: 169 EGYAKLIEMYPERICVIDAEPELKVVVKNTLNEVMKVIHE 208


>gi|325694989|gb|EGD36893.1| thymidylate kinase [Streptococcus sanguinis SK150]
          Length = 212

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLAERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NRFATDGLKPDLTLYFDIDVEEGLARIARSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|323697768|ref|ZP_08109680.1| thymidylate kinase [Desulfovibrio sp. ND132]
 gi|323457700|gb|EGB13565.1| thymidylate kinase [Desulfovibrio desulfuricans ND132]
          Length = 213

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T I  ++ + + +  +V +T EPGG+      R +LL     E   
Sbjct: 1   MFITFEGIEGTGKSTQIGRVRDYFEARGREVLLTLEPGGSRIGVELRKMLLHVDNREITP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  ++ A R  HV  VIRPAL  GK++LCDRF DS+  YQG         L  L E++
Sbjct: 61  ITELFLYLADRAQHVGQVIRPALAAGKVVLCDRFADSTIVYQGYGRGLDTSMLRELNEVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182
           V  + PD TI+LD+  +IGLKR   R ++ +    +   FE + +  H++ R+ +L  A 
Sbjct: 121 VNGLWPDLTIVLDIDPEIGLKRATLR-NIEDGKAKEEGRFEAEHLSFHKRIREGYLTWAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
               R  +VD+A +   V   I  ++
Sbjct: 180 LNHRRMSVVDAAGTPDQVFDQIRAVI 205


>gi|229170881|ref|ZP_04298484.1| Thymidylate kinase [Bacillus cereus MM3]
 gi|228612547|gb|EEK69766.1| Thymidylate kinase [Bacillus cereus MM3]
          Length = 208

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   NGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  +IGL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|124267049|ref|YP_001021053.1| thymidylate kinase / thymidylate synthase [Methylibium
           petroleiphilum PM1]
 gi|124259824|gb|ABM94818.1| thymidylate kinase / thymidylate synthase [Methylibium
           petroleiphilum PM1]
          Length = 215

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 114/213 (53%), Gaps = 15/213 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FISFEGI+GAGK++H+  +    QR+  +V  TREPGGTP AE  R ++L  G+D  
Sbjct: 10  SGRFISFEGIDGAGKSSHLDAVAERWQRRGLEVVRTREPGGTPLAETLRDLVLHQGMD-- 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++  AAR +H++  I PAL  G ++LCDRF D+++AYQG         L +L E
Sbjct: 68  -ALTEALLIFAARRNHLQQCIAPALERGAVVLCDRFTDATFAYQGAGRGFDLAVLTTL-E 125

Query: 123 ISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             VQ        PD T+  DL   +  +R      L  +   D FER+D     + R  +
Sbjct: 126 SWVQRGPGGLRQPDLTLWFDLDPAVAAQR------LVAARTPDRFERQDEAFFHRVRDGY 179

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                 QP+R   +D++ S   VA  I  ++ E
Sbjct: 180 RARFEAQPERFVRIDASQSRDQVAVQIAAMLAE 212


>gi|206972586|ref|ZP_03233529.1| thymidylate kinase [Bacillus cereus AH1134]
 gi|228950579|ref|ZP_04112714.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229067795|ref|ZP_04201113.1| Thymidylate kinase [Bacillus cereus F65185]
 gi|229077306|ref|ZP_04209987.1| Thymidylate kinase [Bacillus cereus Rock4-2]
 gi|229176631|ref|ZP_04304036.1| Thymidylate kinase [Bacillus cereus 172560W]
 gi|229188316|ref|ZP_04315365.1| Thymidylate kinase [Bacillus cereus ATCC 10876]
 gi|206732488|gb|EDZ49667.1| thymidylate kinase [Bacillus cereus AH1134]
 gi|228595115|gb|EEK52885.1| Thymidylate kinase [Bacillus cereus ATCC 10876]
 gi|228606798|gb|EEK64214.1| Thymidylate kinase [Bacillus cereus 172560W]
 gi|228705997|gb|EEL58304.1| Thymidylate kinase [Bacillus cereus Rock4-2]
 gi|228715279|gb|EEL67137.1| Thymidylate kinase [Bacillus cereus F65185]
 gi|228809054|gb|EEM55538.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 208

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEKKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|86607432|ref|YP_476195.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab]
 gi|123504727|sp|Q2JR37|KTHY_SYNJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|86555974|gb|ABD00932.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab]
          Length = 204

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 110/212 (51%), Gaps = 15/212 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EG GKTT  +LL   LQR+ Y    TREPGGT   EA R +LL    D    
Sbjct: 1   MFITLEGGEGVGKTTQQALLAERLQREGYACVSTREPGGTALGEALRELLLHG--DPLTP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++AA R +HV  VI PAL  G++++CDRF DS+ AYQG         +  L  ++
Sbjct: 59  LAELLLYAADRAEHVNKVIAPALAVGQVVICDRFTDSTLAYQGYGRGLNLEQIRQLNHLA 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P  T+ LDL  ++GL R         S   D  E++ +  H +  + F  +A  +
Sbjct: 119 TGGLQPQLTLWLDLAPEVGLAR---------SRLGDKLEQEHLEFHRRVYRGFQALAAAE 169

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           P R   +D+  S   VA  I    W +V+ R+
Sbjct: 170 PQRIVRIDAGGSPLEVAARI----WSVVKPRL 197


>gi|325570727|ref|ZP_08146453.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755]
 gi|325156573|gb|EGC68753.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755]
          Length = 220

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ I  L   LQ      +  TREPGG   AE  R ++L    +E
Sbjct: 7   NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 67  MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E + +   PD T+ LD+  D GL+R+Q NR     +   D  + + +  H++ R  +L +
Sbjct: 127 EFATEGTTPDFTLYLDVDSDTGLRRIQENR-----AHQYDRLDSEGLEFHQRVRHAYLKL 181

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A   P R H +D+    Q V  +  + + E
Sbjct: 182 AEENPVRIHKIDARMGLQEVVESSYSAIVE 211


>gi|269925799|ref|YP_003322422.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789459|gb|ACZ41600.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798]
          Length = 216

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 118/213 (55%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG+GKTT   +L   L+     V +TREPGGT   E  R +LL     +   
Sbjct: 1   MFITFEGPEGSGKTTQARMLATALETLQCKVVLTREPGGTLVGEEIRKILLGPLGKDLDP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   ++F+AAR   V ++I+PA+  GKI++CDR+ DS+ AYQ   D      ++   ++ 
Sbjct: 61  KCILLLFSAARAQLVRHIIKPAIDSGKIVICDRYADSTRAYQWGGDGIPRDEVERAIQLG 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + PD T  LDL  + GL+R +   +    +  +  + +++  H++ R+ +L +A+  
Sbjct: 121 TEGLEPDITFYLDLSPEEGLRRRRTDSARGAESGWNSMDARELEFHQRVREAYLSLAKEY 180

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             R +++D+A   + +   I+ IV + +Q R+ 
Sbjct: 181 SSRFYVIDAAGRIEDIHRTIIEIVNKKLQSRIG 213


>gi|257867902|ref|ZP_05647555.1| thymidylate kinase [Enterococcus casseliflavus EC30]
 gi|257874231|ref|ZP_05653884.1| thymidylate kinase [Enterococcus casseliflavus EC10]
 gi|257876795|ref|ZP_05656448.1| thymidylate kinase [Enterococcus casseliflavus EC20]
 gi|257801985|gb|EEV30888.1| thymidylate kinase [Enterococcus casseliflavus EC30]
 gi|257808395|gb|EEV37217.1| thymidylate kinase [Enterococcus casseliflavus EC10]
 gi|257810961|gb|EEV39781.1| thymidylate kinase [Enterococcus casseliflavus EC20]
          Length = 215

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ I  L   LQ      +  TREPGG   AE  R ++L    +E
Sbjct: 2   NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E + +   PD T+ LD+  D GL+R+Q NR     +   D  + + +  H++ R  +L +
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIQENR-----AHQYDRLDSEGLEFHQRVRHAYLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A   P R H +D+    Q V  +  + + E
Sbjct: 177 AEENPVRIHKIDARMGLQEVVESSYSAIVE 206


>gi|119486991|ref|ZP_01620863.1| Thymidylate kinase [Lyngbya sp. PCC 8106]
 gi|119455920|gb|EAW37054.1| Thymidylate kinase [Lyngbya sp. PCC 8106]
          Length = 219

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 11/224 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58
           +G  I FEG EG GKTT I    ++L+ +       +  T+EPGGT    + R++LL   
Sbjct: 2   NGKLIVFEGSEGGGKTTQIQQTDQWLRDQLGSSVPAIITTKEPGGTALGRSLRNILLDSR 61

Query: 59  VDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           ++E     AE ++FA+ R  HVE  ++P L +G I+LCDRF DS+ AYQG         +
Sbjct: 62  LEEPIAPTAELLLFASDRAQHVETFLKPHLKQGAIILCDRFTDSTIAYQGFGRGLDKNLI 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L +I+   +  D T+  D+ ++ GL R Q R        +D  E+ D+  H++  Q F
Sbjct: 122 KQLNQIATVGLESDLTLWFDIEIEKGLARTQTR------GEMDRMEKADLAFHQRVNQGF 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            ++A    DR   +D+  S Q V+T I  I+ + + K    L S
Sbjct: 176 CELADQAGDRMIRIDANLSLQQVSTQIQTILTQYLLKWGFTLQS 219


>gi|114327739|ref|YP_744896.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1]
 gi|114315913|gb|ABI61973.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1]
          Length = 250

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 114/218 (52%), Gaps = 7/218 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG FI+ EG EGAGK+T    L   L+       VTREPGGT  AE  R +LL  G D 
Sbjct: 34  SSGRFITLEGGEGAGKSTQTRALAEALESLGIRTLVTREPGGTEGAEQLRSLLLY-GPDW 92

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AE ++  AAR  HV   IRPAL +G  +LCDR+ DS+ AYQG    +    + +L 
Sbjct: 93  DGL-AETLLHFAARAQHVARTIRPALEQGIWVLCDRYYDSTMAYQGYCQGADRQRIAALS 151

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   + P+ T++LD PV+  ++R+  R      A  D +ER      E+ R  FLDIA
Sbjct: 152 --AWLGLDPEVTLVLDAPVEASVQRLATRSGTLTVA--DRYERLGKPFFEQVRAAFLDIA 207

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE-LVQKRVSP 218
            + P RC ++D       V    L  + E L   R++P
Sbjct: 208 ASSPQRCVVLDGIRPPAEVTRMALAALAEKLGDPRLAP 245


>gi|323144741|ref|ZP_08079318.1| dTMP kinase [Succinatimonas hippei YIT 12066]
 gi|322415492|gb|EFY06249.1| dTMP kinase [Succinatimonas hippei YIT 12066]
          Length = 205

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 123/211 (58%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           SGLFI+FEG EGAGK+T I  ++R+L+ K  D    REPGGT  AE  R +L +   +E 
Sbjct: 2   SGLFITFEGTEGAGKSTLIKEIERWLREKEIDFVSVREPGGTVLAEKMRAILKTPSPEEK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              ++E ++  AAR   VE +I+PAL +GK ++CDR   S+ AYQG         +D+++
Sbjct: 62  LCDKSELLLMYAARAQLVETLIKPALAQGKCVICDRHDLSTVAYQGGGRGLPMDEIDAVR 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++ +  PD T++LD+   +G++R ++R        LD FE + +   E+ R+ +LD A
Sbjct: 122 NVALGKFRPDLTLLLDIDPKLGMQRARSR------GVLDRFELEQLSFFERVRKAYLDAA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  P    ++D++ +   V    ++ + +L+
Sbjct: 176 KRLP-YIKVIDASKNVDEVRLAAISALEDLL 205


>gi|302190918|ref|ZP_07267172.1| thymidylate kinase [Lactobacillus iners AB-1]
 gi|309808247|ref|ZP_07702156.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a]
 gi|309810090|ref|ZP_07703936.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D]
 gi|312873623|ref|ZP_07733670.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d]
 gi|312875715|ref|ZP_07735710.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b]
 gi|325911589|ref|ZP_08173997.1| dTMP kinase [Lactobacillus iners UPII 143-D]
 gi|308168535|gb|EFO70644.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a]
 gi|308169589|gb|EFO71636.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D]
 gi|311088707|gb|EFQ47156.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b]
 gi|311090876|gb|EFQ49273.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d]
 gi|325476575|gb|EGC79733.1| dTMP kinase [Lactobacillus iners UPII 143-D]
          Length = 213

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 11/211 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E 
Sbjct: 3   GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG     + L +D +++
Sbjct: 63  NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  
Sbjct: 120 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +    P+R   VD+  S   V +  + I+ E
Sbjct: 176 LLSAYPERIKRVDAELSIAEVVSQSVKILEE 206


>gi|15612605|ref|NP_240908.1| thymidylate kinase [Bacillus halodurans C-125]
 gi|14285517|sp|Q9KGL9|KTHY_BACHD RecName: Full=Thymidylate kinase
 gi|10172654|dbj|BAB03761.1| thymidylate kinase [Bacillus halodurans C-125]
          Length = 210

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKT+ +  ++  L+     V  TREPGG P AE  R ++L     
Sbjct: 1   MTKGCFITVEGGEGAGKTSALDAIEEMLRENGLSVVRTREPGGIPIAEQIRSIILDVDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H+   + PAL  G ++LCDRF+DSS AYQG         + ++
Sbjct: 61  RMDPRTEALLYAAARRQHLVEKVLPALEAGHVVLCDRFIDSSLAYQGYARGIGFEDILAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++   PD T++  +  D+GL R+    S RE   LD   ++ +  H+K ++ +  I
Sbjct: 121 NEFAIEGRYPDLTLLFRVDPDVGLSRIHRDQS-REQNRLD---QEALTFHQKVKEGYERI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               P+R   +D+  SF  V  + + ++ +
Sbjct: 177 VETYPERVVEIDANQSFDQVVADAVRMIKQ 206


>gi|119384876|ref|YP_915932.1| dTMP kinase [Paracoccus denitrificans PD1222]
 gi|119374643|gb|ABL70236.1| thymidylate kinase [Paracoccus denitrificans PD1222]
          Length = 199

 Score =  123 bits (308), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 8/193 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63
           +FISFEGI+G+GK+T    L + L  +  +V +TREPGG+  AE  R +L+  CG + + 
Sbjct: 1   MFISFEGIDGSGKSTQARRLVQALTAQGTEVLLTREPGGSEGAEEIRRLLVEGCG-ERWS 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++F AAR DHVE +I+PAL  G  ++ DRF DSS  YQG   +     ++ L  +
Sbjct: 60  PETELLLFTAARRDHVERLIQPALARGAWVVTDRFADSSRVYQGLARAELRQLVEELHRL 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD T I+D+   + L R Q R  +      D FE   +    K R+ FL +A  
Sbjct: 120 TIG-IEPDRTFIIDIDPAVALARGQARGGVE-----DRFETLGLGFQRKLREGFLALAAE 173

Query: 184 QPDRCHIVDSAHS 196
            P R  ++D   S
Sbjct: 174 APGRIRVIDGNGS 186


>gi|14591458|ref|NP_143538.1| thymidylate kinase [Pyrococcus horikoshii OT3]
 gi|6016461|sp|O59366|KTHY_PYRHO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|3258125|dbj|BAA30808.1| 205aa long hypothetical thymidylate kinase [Pyrococcus horikoshii
           OT3]
          Length = 205

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 15/208 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G FI  EGI+G+GKTT   LL  + + K Y+V +T+EP  +   +  R ++L   V    
Sbjct: 3   GYFIVLEGIDGSGKTTQAKLLAEWFEDKGYEVLLTKEPTDSELGKLIRRIILEESVIDGS 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   EAEA++FAA R +HV+ +I PAL EGK+++CDR+  SS AYQ  R     L L+ L
Sbjct: 63  KISYEAEALLFAADRAEHVKKIILPALSEGKVVICDRYFYSSLAYQWARG----LDLNWL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +++     PD  I+LDLPV   L+R++ R +L E      F+ K V +  K R  +L +
Sbjct: 119 IQVNSFAPRPDLAILLDLPVKESLRRIKLRGTLTE------FD-KIVELQRKVRHNYLKL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P+   IV++  S + + ++I+ +V
Sbjct: 172 AEMFPE-MRIVNALSSIEDIHSDIVALV 198


>gi|319936704|ref|ZP_08011117.1| thymidylate kinase [Coprobacillus sp. 29_1]
 gi|319808261|gb|EFW04826.1| thymidylate kinase [Coprobacillus sp. 29_1]
          Length = 207

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 126/213 (59%), Gaps = 10/213 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG+GKTT  +++K  L ++ Y V +TREPGG   AE  R ++        
Sbjct: 2   SGKFITFEGGEGSGKTTIAAMVKEVLDKEGYRVTLTREPGGVEIAEKIRDIIHDVKYTNM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + EA+++AA+R  H+   + PAL +G+I++CDRF+DSS  YQG    ++ + +D +  
Sbjct: 62  DRKTEALLYAASRRQHLVEKVIPALEKGEIVICDRFVDSSMVYQG---LARGIGIDEVYN 118

Query: 123 ISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +++   + ++P+ T+  D+  ++GL+RV   Y+ +E   ++  + +++  HE+  + +L 
Sbjct: 119 MNLFATENILPNRTVFFDIKPEVGLQRV---YANKERE-VNRLDLENIDFHERVYEGYLT 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           I    P+R   VD++   + V   +L  + E++
Sbjct: 175 ICNRFPERIVKVDASQDIEDVLFQVLEKIREIL 207


>gi|259502695|ref|ZP_05745597.1| dTMP kinase [Lactobacillus antri DSM 16041]
 gi|259169340|gb|EEW53835.1| dTMP kinase [Lactobacillus antri DSM 16041]
          Length = 218

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ + ++ KR + +   D V  TREPGG   +E  R VL S    +
Sbjct: 7   GKFISFEGPDGAGKTSVLRAIQKRLVDQLGADRVMYTREPGGNHISEQIRRVLFSPENTD 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDR++DSS AYQG         +  + 
Sbjct: 67  MDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRQLGEEAIWQMN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  ++PD TI LD+   +GL+R+        +  ++  + + +  H+  R  +L + 
Sbjct: 127 QFAIDGLLPDLTIYLDVESAVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRLY 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           R  PDR  ++D++     V  ++   +
Sbjct: 183 RAHPDRIKLIDASQPLDQVIADVAQTI 209


>gi|268315735|ref|YP_003289454.1| thymidylate kinase [Rhodothermus marinus DSM 4252]
 gi|262333269|gb|ACY47066.1| thymidylate kinase [Rhodothermus marinus DSM 4252]
          Length = 220

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 12/219 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ISFEGI+G GK+T   LL + L+   Y   + REPGGT  +E  R +LL   +D    
Sbjct: 1   MLISFEGIDGCGKSTQARLLAQRLETAGYRTLLVREPGGTELSERIRGLLLDPALD-IDP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEI 123
            AE ++F+AAR   V   IRPAL  G I+LCDRF DS+ AYQ G R   +  +L      
Sbjct: 60  FAELLLFSAARRQLVVERIRPALQAGYIVLCDRFYDSTTAYQGGGRGVVELAWLRDFNRR 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++PD T  LD+P+++ L R        ++   D  ER D    E+ R  +  +A  
Sbjct: 120 VTDGLVPDRTYWLDVPLEVALARRD------QAGDPDRMERADPAFFERVRATYAQLATE 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           +PDR   +D+  S +++   I    W  VQ+ + P  ++
Sbjct: 174 EPDRILRLDATASIETLHETI----WNDVQRLLPPTGTR 208


>gi|254386206|ref|ZP_05001517.1| thymidylate kinase [Streptomyces sp. Mg1]
 gi|194345062|gb|EDX26028.1| thymidylate kinase [Streptomyces sp. Mg1]
          Length = 852

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 8/201 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL      
Sbjct: 515 DAGFFIALEGGDGAGKSTQVQALADWIRGKGHEVVVTREPGATPVGKRLRSILLDVSSAG 574

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  + 
Sbjct: 575 LSNRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 634

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LD+  +   +R         +   D  E +    H++ R  FL +A
Sbjct: 635 RWATGGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRAGFLTLA 686

Query: 182 RNQPDRCHIVDSAHSFQSVAT 202
              P R  +VD+    +SV+T
Sbjct: 687 AADPGRYLVVDAGQDPESVST 707


>gi|260913250|ref|ZP_05919732.1| dTMP kinase [Pasteurella dagmatis ATCC 43325]
 gi|260632837|gb|EEX51006.1| dTMP kinase [Pasteurella dagmatis ATCC 43325]
          Length = 215

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 8/209 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EGIEGAGKTT    + R L      D+  TREPGGTP AE  RH++     
Sbjct: 5   MKTGKFIVLEGIEGAGKTTARDSIVRALNAYGIQDIVFTREPGGTPLAEKLRHLIKHETE 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    +AE ++  AAR+  VENVI+PAL EGK ++ DR   SS AYQG         L +
Sbjct: 65  EPVTDKAELLMLYAARIQLVENVIKPALAEGKWVIGDRHDMSSQAYQGGGRQLDKTLLLT 124

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+E  + +  PD T+ LD+   +GL R + R        LD  E++++   ++ RQ +L+
Sbjct: 125 LKETVLGDFEPDLTLYLDIDPVLGLTRARGR------GALDRIEQQNIDFFQRTRQRYLE 178

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + ++ P  C  +D++H    V+ ++ + V
Sbjct: 179 LVQDNPKAC-CIDASHEIDKVSADVQSAV 206


>gi|240142285|ref|YP_002966795.1| thymidylate kinase [Methylobacterium extorquens AM1]
 gi|240012229|gb|ACS43454.1| thymidylate kinase [Methylobacterium extorquens AM1]
          Length = 225

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 6/190 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F S EG EGAGK++ I+ L   ++    +V VTREPGG   AE  R+++LS G  ++ 
Sbjct: 11  GVFASLEGPEGAGKSSQINRLAERMRAAGREVVVTREPGGCKGAEVLRNLVLS-GAVQWD 69

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++FAAAR +HV   I PAL  G ++L DRF +SS AYQG          D L+ I
Sbjct: 70  PRTELMLFAAARREHVVRTIAPALARGAVVLSDRFSESSRAYQGAARGVGTALCDDLERI 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD   +LD+   +GL R + R +  +S     FE  D+  H   RQ FLD A  
Sbjct: 130 ACDGILPDVVFLLDVDPVVGLARSKARAT--DST---MFEALDLEFHRTLRQAFLDRAAE 184

Query: 184 QPDRCHIVDS 193
           +P+   ++ S
Sbjct: 185 RPELFEVIPS 194


>gi|312868193|ref|ZP_07728393.1| dTMP kinase [Streptococcus parasanguinis F0405]
 gi|311095938|gb|EFQ54182.1| dTMP kinase [Streptococcus parasanguinis F0405]
          Length = 212

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G  ISFEG EGAGK++ +  +   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL  GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  SMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+      RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE-REVNRLDL---EGLELHQKVRQGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +P+R   +D++ SF++V  ++L ++
Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVL 204


>gi|85057772|ref|YP_456688.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|123518128|sp|Q2NIY4|KTHY_AYWBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|84789877|gb|ABC65609.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 207

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 123/210 (58%), Gaps = 7/210 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKTTH S L   L +K Y   +T+EPGG    E  R++LL     +   
Sbjct: 1   MFISFEGCEGTGKTTHSSYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSYNKQIDF 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA R +H+  +I PAL + KI++CDR+LDS+ AYQ         F+ ++  ++
Sbjct: 60  HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSKDFVLNINNLA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-ARN 183
           +   MP+ T  LDL   IG++RV+ ++  +E   ++ F+ + +  H+K R+ +LD+  ++
Sbjct: 120 L-NYMPNITFYLDLDPKIGIQRVK-QFRPKE---INSFDLQKLSFHKKVRKGYLDLYQKD 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           Q  R  ++D++ S + +   I   + E+ Q
Sbjct: 175 QQKRIFLIDASKSLEKIYNIIEQKLKEVFQ 204


>gi|317126771|ref|YP_004093053.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522]
 gi|315471719|gb|ADU28322.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522]
          Length = 213

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 124/216 (57%), Gaps = 10/216 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+FEG EGAGKTT +  +K  L+  +  V +TREPGG+  AE  R V+L+    E 
Sbjct: 2   SGVFITFEGGEGAGKTTVLKEIKDRLEASDEKVVMTREPGGSIIAEKIRDVILNPDHTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + P L +G I+LCDRF+DSS  YQG    ++ + ++ +  
Sbjct: 62  DARTEALLYAAARRQHLVEKVFPYLDKGYIVLCDRFIDSSLVYQG---VARKIGIEEVLN 118

Query: 123 ISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I++      MP  T+  D+   IGL+R+  ++  RE   LD   R+ +  H   R+ + +
Sbjct: 119 INLFATGGFMPSKTLFFDIDPKIGLERIA-KHGNREFNRLD---REALDFHYIVRKAYHE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +   +PDR  +VD++ S   V       V+++VQ +
Sbjct: 175 LQGREPDRIEMVDASLSLTEVIEAAWTKVFDIVQAK 210


>gi|240950250|ref|ZP_04754530.1| thymidylate kinase [Actinobacillus minor NM305]
 gi|257465436|ref|ZP_05629807.1| thymidylate kinase [Actinobacillus minor 202]
 gi|240295251|gb|EER46050.1| thymidylate kinase [Actinobacillus minor NM305]
 gi|257451096|gb|EEV25139.1| thymidylate kinase [Actinobacillus minor 202]
          Length = 209

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/208 (38%), Positives = 115/208 (55%), Gaps = 12/208 (5%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGKTT H ++L +      + +  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVLEGLEGAGKTTAHQAILAQLEAAGIHHIVQTREPGGTPLAEKLRHLIKHDLEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQG         L++L++
Sbjct: 63  NDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQLDRQLLETLKQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
             + +  PD TI LD+   IGL+R + R  L   E   LD+F R         RQ +L++
Sbjct: 123 TILGDFEPDLTIYLDIDPAIGLERARGRGELDRIEQQSLDFFYRT--------RQRYLEL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +N  D+  I+++    + VA +I   V
Sbjct: 175 TQNN-DKAVIINAEQPIEKVAADIQQAV 201


>gi|73541128|ref|YP_295648.1| thymidylate kinase [Ralstonia eutropha JMP134]
 gi|123625155|sp|Q471X9|KTHY_RALEJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72118541|gb|AAZ60804.1| thymidylate kinase [Ralstonia eutropha JMP134]
          Length = 203

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FI+FEGI+GAGK+THI ++  R  +RK+   V  TREPGGTP  E  R +LL     +
Sbjct: 3   GKFITFEGIDGAGKSTHIGAVAARLRERKDIPAVVTTREPGGTPLGEDLRQILLH---RK 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         L++L+
Sbjct: 60  MHLETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQGGGRGLATSRLETLE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD T++ D+P++   +R+      RE    D FE +     E+ R  +L  A
Sbjct: 120 TWVQDGLQPDLTLLFDVPLETASERLAG---AREP---DKFEAESRAFFERTRAEYLRRA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P+R  ++D+  S +++   +  I+
Sbjct: 174 AQAPERFRVIDATQSIEAIRVELEKII 200


>gi|71064726|ref|YP_263453.1| thymidylate kinase [Psychrobacter arcticus 273-4]
 gi|71037711|gb|AAZ18019.1| thymidylate kinase [Psychrobacter arcticus 273-4]
          Length = 225

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 114/216 (52%), Gaps = 16/216 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEG EG GKTT I  L   LQ    D   TREPGG+P AE  R +LL        
Sbjct: 19  GHFISFEGTEGVGKTTAIEQLCARLQANGIDYLRTREPGGSPFAERLREILLDPNT-AIN 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLDS 119
            + E ++  AAR DH++ VI PAL  G  ++CDRF DS+ AYQG    + D++    +D+
Sbjct: 78  DDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDATVRGKIDT 137

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E  V + +P+ T+ LDLPV  G+ R   R      +  D FE++      +  + F  
Sbjct: 138 LIEQFVTQ-LPELTLWLDLPVLEGMARANKR------SAADRFEQQATDFFTRVHKGFRT 190

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A   P R   +D++ S   V+  I    W+ V+++
Sbjct: 191 LADEYPKRIQRIDASGSADEVSARI----WQKVEEK 222


>gi|296876048|ref|ZP_06900104.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912]
 gi|296432959|gb|EFH18750.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912]
          Length = 212

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G  ISFEG EGAGK++ +  +   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL  GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  RMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+      RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE-REVNRLDL---EGLELHQKVRQGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +P+R   +D++ SF++V  ++L ++
Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVL 204


>gi|75762825|ref|ZP_00742646.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|218895166|ref|YP_002443577.1| thymidylate kinase [Bacillus cereus G9842]
 gi|228898784|ref|ZP_04063067.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
 gi|228956472|ref|ZP_04118269.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228963128|ref|ZP_04124298.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229039935|ref|ZP_04189700.1| Thymidylate kinase [Bacillus cereus AH676]
 gi|229148440|ref|ZP_04276697.1| Thymidylate kinase [Bacillus cereus m1550]
 gi|226732651|sp|B7ISU0|KTHY_BACC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|74489692|gb|EAO53087.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|218540819|gb|ACK93213.1| thymidylate kinase [Bacillus cereus G9842]
 gi|228634982|gb|EEK91554.1| Thymidylate kinase [Bacillus cereus m1550]
 gi|228727394|gb|EEL78586.1| Thymidylate kinase [Bacillus cereus AH676]
 gi|228796513|gb|EEM43951.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228803162|gb|EEM49983.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228860809|gb|EEN05186.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
          Length = 208

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|327470490|gb|EGF15946.1| thymidylate kinase [Streptococcus sanguinis SK330]
          Length = 212

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLAEQVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+  R   RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA-RSESREVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|163856816|ref|YP_001631114.1| thymidylate kinase [Bordetella petrii DSM 12804]
 gi|229487582|sp|A9INL0|KTHY_BORPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|163260544|emb|CAP42846.1| tmk [Bordetella petrii]
          Length = 207

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 15/204 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+TH + L   L+     V  TREPGGTP  E  R ++LS   +   
Sbjct: 5   GRFITLEGVDGAGKSTHAAWLADALRDMGRTVVATREPGGTPLGETLRGLVLS---ESMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120
            + E ++  AAR +H+  VI PAL  G  ++CDR+ D++YAYQG     + L  D    L
Sbjct: 62  LDTETLLMFAARCEHLTQVIEPALARGDWVVCDRYTDATYAYQG---GGRQLGADRIAVL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T + D+P+++       R  L ++   D FER++    E+ R  +L  
Sbjct: 119 EQWMRPALQPDRTWLFDVPLELA------RARLADARLPDRFEREEAAFFERTRAAYLAR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A+  P R  IVDS+     V   +
Sbjct: 173 AQAHPGRIRIVDSSRPVTEVRAQL 196


>gi|322386922|ref|ZP_08060546.1| thymidylate kinase [Streptococcus cristatus ATCC 51100]
 gi|321269204|gb|EFX52140.1| thymidylate kinase [Streptococcus cristatus ATCC 51100]
          Length = 212

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FIS EG EGAGKT+ +  L   L+   Y++  TREPGG   +E  R V+L  G  
Sbjct: 1   MKKGVFISLEGPEGAGKTSVLEALLPQLKEMGYELLTTREPGGVAISEKIREVILDKGHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+AE +++ A+R  H+   + PAL +G  +L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKAELLLYIASRRQHLAEKVLPALEQGTWVLQDRFIDSSVAYQGYGRGLAVDDVEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V  GL R+  R   RE   LD    + + +HE+ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVKEGLARI-ARNKEREVNRLDL---EGLDLHERVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P R   +D++   + V  + L ++ E
Sbjct: 177 LEKEPGRVVKIDASQPLEQVVADSLAVIKE 206


>gi|323526017|ref|YP_004228170.1| thymidylate kinase [Burkholderia sp. CCGE1001]
 gi|323383019|gb|ADX55110.1| thymidylate kinase [Burkholderia sp. CCGE1001]
          Length = 206

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R   R + R+    D FE +     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DS+ S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIARIQKQLEELI 203


>gi|327462078|gb|EGF08407.1| thymidylate kinase [Streptococcus sanguinis SK1057]
 gi|328946592|gb|EGG40730.1| thymidylate kinase [Streptococcus sanguinis SK1087]
          Length = 212

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLAERVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+  R   RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA-RSESREVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|297622813|ref|YP_003704247.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
 gi|297163993|gb|ADI13704.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
          Length = 217

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 112/214 (52%), Gaps = 8/214 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+FI+FEG EG+GKTT +  L   L+        T+EPGGT   E  R ++L   +  
Sbjct: 7   TRGVFIAFEGPEGSGKTTQLGRLAARLEALGQVPLTTKEPGGTAVGERLRALVLDPAL-R 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E +++AA+R + V +V++PAL  G+++LCDRF  ++ AYQGE       ++  L 
Sbjct: 66  MHPETELLLYAASRAELVASVLKPALAAGRVVLCDRFTGATVAYQGEGRGLPKDWIGVLN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + P  T++ DLP ++GL RV  R         D  E+     HE+ R+ FL  A
Sbjct: 126 ARVTGGLKPHLTLLFDLPPEVGLARVARR------GARDRLEQAAFAFHERVRRGFLQQA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              P   H++D++   + VA  +  +V  L++ R
Sbjct: 180 EQDPS-WHVLDASRPEEEVAGAVWRLVAPLLRDR 212


>gi|148284569|ref|YP_001248659.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong]
 gi|166221759|sp|A5CDS9|KTHY_ORITB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146740008|emb|CAM80084.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong]
          Length = 217

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 4/205 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GKTT   LL   L         TRE GGT  AE  R ++L     +  
Sbjct: 7   GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR +H+E  IRP L EGK ++CDRF+DS+  YQ +    Q L L+ L   
Sbjct: 64  ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSKNSEEQQLILE-LHRK 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T+I+++   I ++R++ R   + +  L+ F+ ++   H+K    F+ +++ 
Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDNRNQQFHQKITDAFIQVSKL 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+R   ++     + V++ ++NI+
Sbjct: 183 FPERIVQINGEPMIEDVSSEVINII 207


>gi|218231073|ref|YP_002364880.1| thymidylate kinase [Bacillus cereus B4264]
 gi|226732652|sp|B7HIJ8|KTHY_BACC4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218159030|gb|ACK59022.1| dTMP kinase [Bacillus cereus B4264]
          Length = 208

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEKYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|238897674|ref|YP_002923353.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259494273|sp|C4K3R2|KTHY_HAMD5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229465431|gb|ACQ67205.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 210

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 11/215 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           G FI  EG+EGAGK+T ++ +++FL+  K  DV  TREPGGT  +E  RH++     +E 
Sbjct: 3   GKFIVIEGLEGAGKSTAVNTVQQFLRHFKIQDVICTREPGGTALSEEIRHLIKKKSQNEE 62

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +AE ++  AAR+  +EN+I+PAL  G  ++ DR   SS AYQG     +  F+ SL
Sbjct: 63  ILTDKAELLLLYAARVQLLENIIKPALSSGTWVIGDRHDLSSQAYQGGGRGIKSEFIKSL 122

Query: 121 QEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            + ++     PD T+ LDLP ++GL+R + R        LD  E++ ++  E+ R  +L+
Sbjct: 123 ADFTLGSSFRPDLTLYLDLPPELGLQRARKR------GHLDRIEQQSLVFFERIRARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  + P R  ++D++   + V  +I N +  L++K
Sbjct: 177 LTYDDP-RIKMIDASKPIKKVTVDIQNALLSLLEK 210


>gi|256827903|ref|YP_003156631.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028]
 gi|256577079|gb|ACU88215.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028]
          Length = 211

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 1/202 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEG+EG GK+T    L     R+ +DV  T EPGG+   +  R +LL     +  +
Sbjct: 1   MFLTFEGMEGCGKSTQCKKLIEHFVRQGHDVLHTLEPGGSRLGKELRRILLDPKNSDLSS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E  ++ A R  HV +VIRPA+ +G+ ++CDRF DS+  YQG         L  L +++
Sbjct: 61  TSELFLYLADRAQHVSSVIRPAMEDGRTVICDRFADSTVVYQGYGRGLDPSLLHHLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           VQ + PD TI+LD+  +IGL+R   R     ++A    FE + +  H + R+ +L  A  
Sbjct: 121 VQGLWPDMTILLDVEPEIGLRRALTRNMQDNKTATEGRFEAESMAFHTRIREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
              R  +VD+  +  +V  +IL
Sbjct: 181 HRGRFLVVDAGRNPDAVFDSIL 202


>gi|227513699|ref|ZP_03943748.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577]
 gi|227522511|ref|ZP_03952560.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290]
 gi|227083018|gb|EEI18330.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577]
 gi|227090333|gb|EEI25645.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290]
          Length = 216

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ ++ +F ++    + VTREPGG   +E  R V+L     E
Sbjct: 2   TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL   K++LCDR++DSS AYQG         +  + 
Sbjct: 62  MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + ++++P  TI  ++PV++GL R+      R+S+ +D  + +    H++  Q ++ + 
Sbjct: 122 EFATEKILPYKTIYFEIPVEVGLNRIAKH---RDSSKIDRLDVETTAFHKRVHQGYMKLI 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               DR  I+D+    + V  +  +++ ++
Sbjct: 179 DEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208


>gi|30018302|ref|NP_829933.1| thymidylate kinase [Bacillus cereus ATCC 14579]
 gi|229125548|ref|ZP_04254581.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4]
 gi|229142836|ref|ZP_04271279.1| Thymidylate kinase [Bacillus cereus BDRD-ST24]
 gi|296500863|ref|YP_003662563.1| thymidylate kinase [Bacillus thuringiensis BMB171]
 gi|46576501|sp|Q81JB5|KTHY_BACCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|29893842|gb|AAP07134.1| Thymidylate kinase [Bacillus cereus ATCC 14579]
 gi|228640599|gb|EEK96986.1| Thymidylate kinase [Bacillus cereus BDRD-ST24]
 gi|228657865|gb|EEL13670.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4]
 gi|296321915|gb|ADH04843.1| thymidylate kinase [Bacillus thuringiensis BMB171]
          Length = 208

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKIFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|103486743|ref|YP_616304.1| thymidylate kinase [Sphingopyxis alaskensis RB2256]
 gi|98976820|gb|ABF52971.1| thymidylate kinase [Sphingopyxis alaskensis RB2256]
          Length = 207

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 6/193 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T +  L   L  ++ +V  TREPGG+  AEA R +L+    D
Sbjct: 1   MIRGRFITLEGGEGVGKSTQLRALSEALAARSIEVVATREPGGSVGAEAIRTLLMEGSDD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A +EA++FAAAR DHV   IRPAL  G  +LCDRF+DSS AYQG         + +L
Sbjct: 61  RWDARSEALLFAAARADHVARTIRPALARGAWVLCDRFVDSSRAYQGGGGGITDADILAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                + ++PD T +L +  D   +R+  R         D    K      +    F ++
Sbjct: 121 HRFGSRGLLPDRTFLLTVRPDEAARRLAARGD------RDRMGSKPADYQARLAARFAEM 174

Query: 181 ARNQPDRCHIVDS 193
           A  +P R  ++D+
Sbjct: 175 AATEPQRWRLIDA 187


>gi|259501361|ref|ZP_05744263.1| dTMP kinase [Lactobacillus iners DSM 13335]
 gi|315653112|ref|ZP_07906037.1| thymidylate kinase [Lactobacillus iners ATCC 55195]
 gi|259167214|gb|EEW51709.1| dTMP kinase [Lactobacillus iners DSM 13335]
 gi|315489477|gb|EFU79114.1| thymidylate kinase [Lactobacillus iners ATCC 55195]
          Length = 234

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E 
Sbjct: 24  GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 83

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG     + L +D +++
Sbjct: 84  NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 140

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  
Sbjct: 141 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 196

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    P+R   VD+  S   V +  + I+ E +
Sbjct: 197 LLSAYPERIKRVDAELSIAEVVSQSVKILEEYM 229


>gi|332157932|ref|YP_004423211.1| thymidylate kinase [Pyrococcus sp. NA2]
 gi|331033395|gb|AEC51207.1| thymidylate kinase [Pyrococcus sp. NA2]
          Length = 205

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 116/211 (54%), Gaps = 19/211 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--- 59
            G FI FEGI+G+GKTT   LL ++ +   Y+V +T+EP  T   +  R ++L   +   
Sbjct: 2   KGYFIVFEGIDGSGKTTQAKLLAKWFRDNGYEVLLTKEPTDTEFGKLIRKLVLEGSIIDG 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                EAEA++FAA R +HV+ +I PAL EGKI++CDR+L SS AYQ  R       LD 
Sbjct: 62  SRISYEAEALLFAADRAEHVKKIILPALREGKIVICDRYLYSSLAYQWARG------LDL 115

Query: 120 LQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              I V    P  D  I+LDLP+   L+R++ R    E      F+ K V +  K R+ +
Sbjct: 116 EWLIKVNSFAPRADLVILLDLPITKSLERIRGRVIKTE------FD-KLVELQRKVRENY 168

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L +A   P+   +VD+  + + V  N++ +V
Sbjct: 169 LKLAEMFPE-IRVVDAMANIEDVHNNVVTLV 198


>gi|302535280|ref|ZP_07287622.1| integral membrane protein with kinase activity [Streptomyces sp. C]
 gi|302444175|gb|EFL15991.1| integral membrane protein with kinase activity [Streptomyces sp. C]
          Length = 1094

 Score =  122 bits (305), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 13/218 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 515 TGFFIALEGGDGAGKSTQVQALAEWIRGKGHEVVVTREPGATPVGKRLRSILLDISSAGL 574

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++++RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 575 SNRAEALLYAADRAEHVDSLVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARISR 634

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 635 WATGGLVPNLTVLLDVSPETARERF--------TEAPDRLESEPTEFHQRVRAGFLTLAA 686

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
             P R  +VD+     SV T +L+ +      R+ PLS
Sbjct: 687 ADPGRYLVVDAGQDPGSVTTVVLHRL-----DRMLPLS 719


>gi|169824826|ref|YP_001692437.1| thymidylate kinase [Finegoldia magna ATCC 29328]
 gi|238687760|sp|B0S2F7|KTHY_FINM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|167831631|dbj|BAG08547.1| thymidylate kinase [Finegoldia magna ATCC 29328]
          Length = 203

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 112/204 (54%), Gaps = 7/204 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GK+T I  +  +L   NYDV  TREPGG+P AE  R+++L     + G 
Sbjct: 1   MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I PAL E KI+LCDRFL SS AYQG         + ++ E +
Sbjct: 61  RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  V PD  +  D+     LKR   + SL  +   D  E++    HE+    + +I  N 
Sbjct: 121 INGVFPDFVLFFDVDPITTLKR---KSSLDTA---DRLEKEGNNFHERVYNGYKEIL-NS 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                I+D+  S + V +  + ++
Sbjct: 174 EKNIEIIDATQSVEDVFSQCIEVL 197


>gi|12722080|gb|AAK03757.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 243

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EGIEGAGKTT    + R L     +D+  TREPGGTP AE  R ++     
Sbjct: 35  MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 94

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118
           +    +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQ G R   QHL L 
Sbjct: 95  EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHL-LH 153

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  + E  PD T+ LD+   +GL R + R        LD  E++++    + RQ + 
Sbjct: 154 TLKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQ 207

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++ R+ P +   +D++ +   VA ++
Sbjct: 208 ELVRHNP-KAVTIDASQTMSKVAEDV 232


>gi|163839161|ref|YP_001623566.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209]
 gi|162952637|gb|ABY22152.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209]
          Length = 221

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG +GAGK+T   LL   L+     V +TREPGGTP  E  R ++L  G  + 
Sbjct: 19  SGFFIAFEGGDGAGKSTQARLLAAALKDLGRQVVLTREPGGTPVGEKLRSLVLDHGQGQI 78

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++FAAAR  H E VIRPAL EGK+++ DR++DSS AYQG         +  + E
Sbjct: 79  DARTEALLFAAARAAHAEQVIRPALAEGKVVITDRYIDSSIAYQGAGRDLGEDEVRKVNE 138

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ TI+LD+  + G  R       R  A  D  E +    H++ RQ FL++A 
Sbjct: 139 WATAGLLPELTILLDVAANEGRNR-------RAGARPDRLESEPDNFHDRIRQAFLNLAS 191

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P +  I+++  S   +   IL    EL+
Sbjct: 192 ARPKQYLILNARLSIDELQQAILQRAKELL 221


>gi|309805418|ref|ZP_07699465.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c]
 gi|312872145|ref|ZP_07732218.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|329921009|ref|ZP_08277537.1| dTMP kinase [Lactobacillus iners SPIN 1401G]
 gi|308165236|gb|EFO67472.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c]
 gi|311092229|gb|EFQ50600.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|328935285|gb|EGG31765.1| dTMP kinase [Lactobacillus iners SPIN 1401G]
          Length = 229

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E 
Sbjct: 19  GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 78

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG     + L +D +++
Sbjct: 79  NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 135

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  
Sbjct: 136 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 191

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    P+R   VD+  S   V +  + I+ E +
Sbjct: 192 LLSAYPERIKRVDAELSIAEVVSQSVKILEEYM 224


>gi|261377929|ref|ZP_05982502.1| dTMP kinase [Neisseria cinerea ATCC 14685]
 gi|269145789|gb|EEZ72207.1| dTMP kinase [Neisseria cinerea ATCC 14685]
          Length = 206

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKSTNLAAIKAWFERRRLPVLFTREPGGTALGEALREILLNPAT-KAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  A+R+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFASRMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+      RE    D FE++      + R ++L+ A   P
Sbjct: 124 GSLKPDLTLLLDVPLEVSMARIGQ---AREK---DRFEQEQADFFMRVRGVYLNRATACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++D   S + V  +I  ++
Sbjct: 178 ERYAVIDGNRSVEEVRNSIEKVL 200


>gi|319939588|ref|ZP_08013947.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV]
 gi|319811177|gb|EFW07483.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV]
          Length = 212

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G+FIS EG +GAGK++ +  L   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MSKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   I PAL  G+++L DRF+DSS AYQG     +   +D L
Sbjct: 61  EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+      +E    D  +R+ V  H++ R+ +L I
Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAKS---KERGA-DRLDRESVEWHQRVREGYLSI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            + +P+R   +D++   + V  + L ++ E V+
Sbjct: 177 LKKEPNRVRKIDASQPLEKVVADTLAVLAEHVE 209


>gi|119025180|ref|YP_909025.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703]
 gi|154486549|ref|ZP_02027956.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis
           L2-32]
 gi|166221721|sp|A0ZZR0|KTHY_BIFAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118764764|dbj|BAF38943.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703]
 gi|154084412|gb|EDN83457.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis
           L2-32]
          Length = 217

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 17/209 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G FISFEG++G GKTT +  L+ +++ +  +  VTREPGGT    A R +LL  GVD   
Sbjct: 3   GTFISFEGVDGVGKTTQVERLRAYVESQGRECVVTREPGGTALGVAIRKMLLH-GVDTGD 61

Query: 61  -----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +     EA++FAA R  HV  VI PAL  G +++ DR+LDSS AYQ         
Sbjct: 62  ENDCADIAPRTEALLFAADRAQHVAEVILPALQRGAVVITDRYLDSSLAYQAGGRELTAA 121

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + +L   +   ++P+ T +LD+       R+Q+     E+A  D+  R         R 
Sbjct: 122 EIRNLSMWATNGLLPERTYLLDMDPAQSHARLQHAEDRMEAAGNDFQRRT--------RV 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            FLD+A  +P+R H++D++ S + V   I
Sbjct: 174 AFLDLAEREPERFHVIDASQSIEDVWARI 202


>gi|322390021|ref|ZP_08063559.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903]
 gi|321143275|gb|EFX38715.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903]
          Length = 212

 Score =  122 bits (305), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G  ISFEG EGAGK++ +  +   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL  GKI+L DRF+DSS AYQG         ++ L
Sbjct: 61  SMDAKTELLLYIASRRQHLVERVLPALAAGKIVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+      RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDVDVEEGLARIAKNQE-REVNRLDL---EGLELHQKVRQGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +P+R   +D++ SF++V  ++L ++
Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVL 204


>gi|254785815|ref|YP_003073244.1| dTMP kinase [Teredinibacter turnerae T7901]
 gi|259494282|sp|C5BU64|KTHY_TERTT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|237685419|gb|ACR12683.1| dTMP kinase [Teredinibacter turnerae T7901]
          Length = 205

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 12/205 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG EG GK+T+++ ++ FL+ +  DV  TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGRFITVEGTEGVGKSTNLAFIEGFLRSRAIDVITTREPGGTPLAEELRELLLAKREEPV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121
            A AE ++  AAR  H+  ++ PAL  G+ +LCDRF D++YAYQG   + + L L+++  
Sbjct: 62  DACAELLMVFAARAQHLNQLVAPALARGQWVLCDRFTDATYAYQG---AGRGLSLETISK 118

Query: 122 -EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            E  VQ  + PD T+ LD+ V +GL+R + R      A LD FE +DV   E+ R  +  
Sbjct: 119 LEFLVQGSLQPDITVWLDIDVRLGLERARAR------ADLDRFEEEDVSFFERVRAGYRA 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
            A   P R   +++      V T+I
Sbjct: 173 RAEEAPARFCRINAGQPLAQVQTDI 197


>gi|297201354|ref|ZP_06918751.1| thymidylate kinase [Streptomyces sviceus ATCC 29083]
 gi|297147859|gb|EFH28761.1| thymidylate kinase [Streptomyces sviceus ATCC 29083]
          Length = 1065

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 8/201 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL      
Sbjct: 507 DAGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAG 566

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  + 
Sbjct: 567 LSHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARIN 626

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P  T++LD+  +I  +R         +   D  E +    H + R  FL +A
Sbjct: 627 RWATNGLVPHLTVLLDVSPEIARERF--------TEAPDRLESEPAEFHARVRSGFLTLA 678

Query: 182 RNQPDRCHIVDSAHSFQSVAT 202
              P R  +VD+    ++V+T
Sbjct: 679 AADPGRYLVVDAGQEPEAVST 699


>gi|297587209|ref|ZP_06945854.1| thymidylate kinase [Finegoldia magna ATCC 53516]
 gi|297575190|gb|EFH93909.1| thymidylate kinase [Finegoldia magna ATCC 53516]
          Length = 203

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 7/204 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GK+T I  +  +L   NYDV  TREPGG+P AE  R+++L     + G 
Sbjct: 1   MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENTKMGY 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I PAL E KI+LCDRFL SS AYQG         +  + E +
Sbjct: 61  RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRDLGIENVRKINEFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  V PD  +  D+     LKR   + SL  +   D  E++    HE+    + +I  N 
Sbjct: 121 INGVYPDFVLFFDVDPITTLKR---KSSLDTA---DRLEKEGNNFHERVYNGYKEIL-NS 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                I+D+  S + V +  + ++
Sbjct: 174 EKNIEIIDATQSVEDVFSQCIKVL 197


>gi|295676547|ref|YP_003605071.1| thymidylate kinase [Burkholderia sp. CCGE1002]
 gi|295436390|gb|ADG15560.1| thymidylate kinase [Burkholderia sp. CCGE1002]
          Length = 206

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+   +  L+ K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+ +VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QQMD---LETEALLMFALRRQHLADVIEPALTRGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DLP  +  +R   R + R     D FE +     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLPPAVANER---RSAARNP---DRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++  A   P R  I+DS+ S   +   +  ++
Sbjct: 172 YMRRAEEAPYRFAIIDSSQSVARIQKQLEELI 203


>gi|301051766|ref|YP_003789977.1| thymidylate kinase [Bacillus anthracis CI]
 gi|300373935|gb|ADK02839.1| thymidylate kinase [Bacillus cereus biovar anthracis str. CI]
          Length = 208

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP+ TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPNLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|182437093|ref|YP_001824812.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326777708|ref|ZP_08236973.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1]
 gi|178465609|dbj|BAG20129.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326658041|gb|EGE42887.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1]
          Length = 1084

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 506 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD  VD    R       R +   D  E +    HE+ R  FL +A 
Sbjct: 626 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAAFHERVRSGFLTLAA 677

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    +S+ T
Sbjct: 678 ADPTRYLVVDAGQEPESITT 697


>gi|239989562|ref|ZP_04710226.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 11379]
          Length = 1070

 Score =  121 bits (304), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 557 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD  VD    R       R +   D  E +    HE+ R  FL +A 
Sbjct: 617 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAEFHERVRSGFLTLAA 668

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    +S+ T
Sbjct: 669 ADPTRYLVVDAGQEPESITT 688


>gi|212635620|ref|YP_002312145.1| thymidylate kinase [Shewanella piezotolerans WP3]
 gi|212557104|gb|ACJ29558.1| Thymidylate kinase [Shewanella piezotolerans WP3]
          Length = 214

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 10/205 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63
           F+  EG+EGAGK++ I+L++ F+++      V TREPGGTP AE  R ++ ++   D   
Sbjct: 13  FVVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKVANESDPLC 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++F AAR   V NVI+P+L EGK +L DR   SS AYQG       L + S+ E 
Sbjct: 73  DEAECLIFYAARAQLVANVIKPSLAEGKWVLGDRHNLSSLAYQGGGRGLMPL-VSSISEA 131

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +++   PD T+ LD+   +GL R  NR        LD  E++++    + R  FL  A N
Sbjct: 132 TLKGFKPDLTLYLDIDPKLGLARAANR------GALDRIEQQELAFFNRTRATFLSYADN 185

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             D   I+D++ S  +V  +I+ ++
Sbjct: 186 D-DSIMIIDASQSMAAVHKDIIAVL 209


>gi|161723306|ref|NP_246612.2| thymidylate kinase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|14285512|sp|Q9CKE9|KTHY_PASMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 209

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EGIEGAGKTT    + R L     +D+  TREPGGTP AE  R ++     
Sbjct: 1   MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118
           +    +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQ G R   QHL L 
Sbjct: 61  EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHL-LH 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  + E  PD T+ LD+   +GL R + R        LD  E++++    + RQ + 
Sbjct: 120 TLKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++ R+ P +   +D++ +   VA ++
Sbjct: 174 ELVRHNP-KAVTIDASQTMSKVAEDV 198


>gi|229107717|ref|ZP_04237354.1| Thymidylate kinase [Bacillus cereus Rock1-15]
 gi|228675690|gb|EEL30897.1| Thymidylate kinase [Bacillus cereus Rock1-15]
          Length = 208

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H+  R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKSVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|74317561|ref|YP_315301.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259]
 gi|123611774|sp|Q3SIM9|KTHY_THIDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|74057056|gb|AAZ97496.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259]
          Length = 204

 Score =  121 bits (304), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 13/211 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+TH+  +  +L+ +  +V VTREPGGT   E  R +LL     E  
Sbjct: 5   GKFITLEGVDGAGKSTHVGFVAEWLRGQGREVIVTREPGGTALGETLRELLLH---REMA 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121
           A+ E ++  AAR  H+  +I PAL  G  ++ DRF D+SYAYQ  G R +++   + +L+
Sbjct: 62  ADTELLLMFAARQQHLAELILPALARGAWVVSDRFTDASYAYQCGGRRIAAER--IAALE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   +   PD T++ D+P  +  +R   R S+R +   D FE++      + R  +L  A
Sbjct: 120 DWVQRGFAPDLTLLFDVPPAVAEER---RSSVRAA---DRFEQEAGSFFARVRDAYLVRA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R +P R H++D+  +  +V   I  ++ +L 
Sbjct: 174 RAEPHRIHVLDARQTIDAVQAEIARLLQDLT 204


>gi|302379541|ref|ZP_07268026.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3]
 gi|303234538|ref|ZP_07321175.1| dTMP kinase [Finegoldia magna BVS033A4]
 gi|302312448|gb|EFK94444.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3]
 gi|302494372|gb|EFL54141.1| dTMP kinase [Finegoldia magna BVS033A4]
          Length = 203

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 7/204 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GK+T I  +  +L   NYDV  TREPGG+P AE  R+++L     + G 
Sbjct: 1   MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I PAL E KI+LCDRFL SS AYQG         + ++ E +
Sbjct: 61  RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + PD  +  D+     LKR   + SL  +   D  E++    HE+    + +I  N 
Sbjct: 121 INGIFPDFVLFFDVDPITTLKR---KSSLDTA---DRLEKEGNNFHERVYNGYKEIL-NS 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                I+D+  S + V +  + ++
Sbjct: 174 EKNIEIIDATQSVEDVFSQCIEVL 197


>gi|110003916|emb|CAK98256.1| thymidylate kinase protein [Spiroplasma citri]
          Length = 215

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 10/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           LFI+ EGI+G+GKTT   LLK  L+ + Y V +TREPGG   AE  R+V+LS    G+D 
Sbjct: 3   LFITLEGIDGSGKTTISKLLKEKLRSEGYQVVLTREPGGNEIAEQIRNVILSKHNLGMDP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +    EA+++ AAR  HV   I PAL  G+I++CDRF+DS+ AYQG         LD +Q
Sbjct: 63  W---TEALLYIAARRQHVVEDILPALKRGEIVICDRFMDSTSAYQGYARGLGIWTLDEVQ 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I +    PD T+  D+   +  +R++    +R    ++  + +    H+K  + +  + 
Sbjct: 120 SIVLGTTKPDLTLFFDIEPTMASERMK----VRNEVEMNRLDLEKNSFHKKVYEGYQVLI 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               +R  ++D++     V   +   V E++QK
Sbjct: 176 SENAERIKVIDASKPVNEVLEQVYYYVDEIIQK 208


>gi|298491750|ref|YP_003721927.1| thymidylate kinase ['Nostoc azollae' 0708]
 gi|298233668|gb|ADI64804.1| thymidylate kinase ['Nostoc azollae' 0708]
          Length = 209

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG  I FEG+EG GKTT + L  ++L+  +    +T EPGGT      R +LL    D+ 
Sbjct: 2   SGKLIVFEGVEGCGKTTQMHLCSQWLRDLSVSFSLTCEPGGTELGTHLRQLLLENSEDKP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            +E  E +++ A R  H+E  ++P L +GK +LCDR+ DS+ AYQG         ++ L 
Sbjct: 62  ISEITELLLYGADRAQHIEQELKPNLADGKYILCDRYTDSTIAYQGYGRGLSMSIINQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+   +  D TI LD+ V++GL R       R+ A LD  E++ +  H + +Q + ++A
Sbjct: 122 YIATGGLESDLTIWLDIDVEVGLARK------RDQATLDRIEQETIAFHRRVQQGYTELA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P R   VD + S ++V   I  I+
Sbjct: 176 ATHPSRIFRVDGSLSKETVQQRIQEIL 202


>gi|228918981|ref|ZP_04082361.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228840630|gb|EEM85891.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 208

 Score =  121 bits (304), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQLI 203


>gi|296157859|ref|ZP_06840693.1| thymidylate kinase [Burkholderia sp. Ch1-1]
 gi|295892105|gb|EFG71889.1| thymidylate kinase [Burkholderia sp. Ch1-1]
          Length = 206

 Score =  121 bits (303), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+S  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R   R + R+    D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEIASER---RSAARDP---DRFESESEAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DSA S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSAQSITQIQRRLEELI 203


>gi|323351073|ref|ZP_08086730.1| thymidylate kinase [Streptococcus sanguinis VMC66]
 gi|322122797|gb|EFX94506.1| thymidylate kinase [Streptococcus sanguinis VMC66]
          Length = 212

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AE  R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAETIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|125623282|ref|YP_001031765.1| thymidylate kinase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166221749|sp|A2RIC4|KTHY_LACLM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12483716|gb|AAG53731.1|AF178425_1 TcsCorf1 [Lactococcus lactis subsp. cremoris MG1363]
 gi|124492090|emb|CAL97019.1| Tmk protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070033|gb|ADJ59433.1| thymidylate kinase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 211

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   +V  TREPGG   AE  R ++L     E 
Sbjct: 2   NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++FAAAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFAAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +   + PD T+  D+  D+ L+R+ +NR    E   LD  ER +  +H K R+ +L+I 
Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P R   +D++ S + V  + L ++
Sbjct: 177 AKEPGRFVKIDASQSLEKVVADTLEVL 203


>gi|288905947|ref|YP_003431169.1| thymidylate kinase [Streptococcus gallolyticus UCN34]
 gi|288732673|emb|CBI14245.1| thymidylate kinase [Streptococcus gallolyticus UCN34]
          Length = 211

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +     PD T+  D+  +IGL R+  + + RE   LD  E+ D  +H++ R+ +L +
Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVRKGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A  Q  R   +D++     V    L+ + E + K
Sbjct: 177 A-EQEKRIVTIDASRELADVVLETLHTILEQLAK 209


>gi|329910241|ref|ZP_08275259.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546227|gb|EGF31265.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 205

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 110/209 (52%), Gaps = 15/209 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEGI+GAGK++H+S +   L  +   V  TREPGGTP  E  R VLL     +   E
Sbjct: 9   FITFEGIDGAGKSSHLSFVADLLVARGIRVTSTREPGGTPLGEQLRSVLLH---QKMHLE 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---FLDSLQE 122
            EA++  A+R +H+  VI PAL  G  ++ DRF D+++AYQG     +HL    L+ L++
Sbjct: 66  TEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQG---GGRHLPVAKLEQLEQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T++ D+P+D+       R  L  +  LD FE++        R  +L  A 
Sbjct: 123 WVHPHLQPDLTLLFDVPLDVA------RARLDATRSLDKFEQEQSDFFAGVRGEYLRRAA 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P R  IVDS  S   V   +  I+  L
Sbjct: 177 QFPARFRIVDSTQSMAQVRAALTAIMASL 205


>gi|170692442|ref|ZP_02883605.1| dTMP kinase [Burkholderia graminis C4D1M]
 gi|170142872|gb|EDT11037.1| dTMP kinase [Burkholderia graminis C4D1M]
          Length = 206

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R   R + R+    D FE +     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DS+ S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEELI 203


>gi|89070236|ref|ZP_01157560.1| thymidylate kinase [Oceanicola granulosus HTCC2516]
 gi|89044156|gb|EAR50314.1| thymidylate kinase [Oceanicola granulosus HTCC2516]
          Length = 202

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 10/193 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGI+G+GK+T   LL   L     D  +TREPGG+  AE  R ++L+    
Sbjct: 1   MAPGRFITFEGIDGSGKSTQARLLAERLP----DALLTREPGGSAGAEEIRALVLNGDPG 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  I PAL  G+ ++CDRF DS+  YQG         +D L
Sbjct: 57  RWSAETELLLFTAARRDHLEKTIEPALAAGRTVICDRFADSTRVYQGATRGDLRATVDKL 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +++    PD T I+D+  +  L R   R           FE   + + E  R  FL +
Sbjct: 117 HALTIGR-EPDLTFIIDMDPETALARGVARPGAER-----RFEDFGLALQETVRHGFLSL 170

Query: 181 ARNQPDRCHIVDS 193
           AR   +RC ++D 
Sbjct: 171 ARQFSERCIVIDG 183


>gi|297205016|ref|ZP_06922412.1| thymidylate kinase [Lactobacillus jensenii JV-V16]
 gi|297149594|gb|EFH29891.1| thymidylate kinase [Lactobacillus jensenii JV-V16]
          Length = 215

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKTT +  L   +++K   ++ VTREPGG+  AEA R ++L+    E
Sbjct: 2   AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G+++  DRF+DSS AYQG     ++L ++ + 
Sbjct: 62  MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQG---MGRNLGIEKVA 118

Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           EI   +   + P+ T+ LD+    GL R+      +E    D  E++ +  H+K    + 
Sbjct: 119 EINQFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQ 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +I +  P+R  +VD++     V  + L I+ +
Sbjct: 175 EIVKRYPERIKVVDASQDIDQVVADCLAILKQ 206


>gi|306831966|ref|ZP_07465121.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304425892|gb|EFM29009.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 211

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +       PD T+  D+  +IGL R+  + + RE   LD  E+ D  +H++ R+ +L +
Sbjct: 121 NDFVTDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVREGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A  Q  R   +D++     V +  L+ + E + K
Sbjct: 177 A-EQEKRIVTIDASRELADVVSETLHTILEQLAK 209


>gi|228905827|ref|ZP_04069725.1| Thymidylate kinase [Bacillus thuringiensis IBL 200]
 gi|228853767|gb|EEM98526.1| Thymidylate kinase [Bacillus thuringiensis IBL 200]
          Length = 208

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + +++   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQRAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ I+
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203


>gi|184201527|ref|YP_001855734.1| thymidylate kinase [Kocuria rhizophila DC2201]
 gi|183581757|dbj|BAG30228.1| thymidylate kinase [Kocuria rhizophila DC2201]
          Length = 218

 Score =  121 bits (303), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 110/197 (55%), Gaps = 5/197 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG +GAGK+T +S L + L+   + V  TREPGGTP AE+ R ++L        
Sbjct: 7   GALIVFEGGDGAGKSTQVSALVQALRAGGHTVTCTREPGGTPLAESVRALVLDPAHAPVA 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FA+AR DHV  +IRPA+  G+I++CDRF+DSS AYQG         +  L + 
Sbjct: 67  PATEALLFASARADHVARLIRPAVERGEIVVCDRFVDSSVAYQGAGRGLGLARVADLNQW 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++Q ++PD T++LD  VD   +        R  +  D  E +D+  H      F ++A  
Sbjct: 127 ALQGLVPDLTVLLD--VD---QTTAQARRRRRGSASDRMEAEDLAFHATVNAAFRELAAA 181

Query: 184 QPDRCHIVDSAHSFQSV 200
            P R  ++D+A S + +
Sbjct: 182 APQRYLVLDAAESAERI 198


>gi|163789941|ref|ZP_02184377.1| thymidylate kinase [Carnobacterium sp. AT7]
 gi|159874881|gb|EDP68949.1| thymidylate kinase [Carnobacterium sp. AT7]
          Length = 211

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 8/214 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FI+ EG +GAGKT+ I  L+   ++    ++  TREPGG+  AE  R ++L+    E 
Sbjct: 3   GIFITIEGPDGAGKTSVIKKLIPMLVETIQQEIVATREPGGSRIAEEIRELILNPENIEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  H+   I PAL  GK+++CDRF+DSS AYQG         +  + +
Sbjct: 63  DIRTEALLYAAGRRQHLVEKIIPALETGKVVICDRFVDSSLAYQGVARGIGISEVAEINQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+ LD+   +GL+R+      R+    D  +++ +  HEK R  +L IA+
Sbjct: 123 FATDNLSPDLTLYLDIEAHLGLERINQNKDNRQ---FDRLDQETLEFHEKVRSAYLAIAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            Q +R   +D++   + V  +     +E + KR+
Sbjct: 180 EQSERIVQIDASQELEKVVAD----CYETIIKRI 209


>gi|228937333|ref|ZP_04099980.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970219|ref|ZP_04130879.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976789|ref|ZP_04137202.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
 gi|228782885|gb|EEM31050.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
 gi|228789454|gb|EEM37373.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228822291|gb|EEM68272.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937822|gb|AEA13718.1| thymidylate kinase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 208

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R++     RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     +R  +V++    + +   ++ I+
Sbjct: 175 VVERFSERIVLVNADQPMEKLIEEVVQII 203


>gi|91775853|ref|YP_545609.1| thymidylate kinase [Methylobacillus flagellatus KT]
 gi|123078858|sp|Q1H169|KTHY_METFK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91709840|gb|ABE49768.1| thymidylate kinase [Methylobacillus flagellatus KT]
          Length = 203

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 9/208 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK++HI  +   L+ +  +V  TREPGGTP  E  R +LL    +   
Sbjct: 3   GRFITLEGMDGAGKSSHIESIVSVLEGRGLEVVSTREPGGTPLGEKLRELLLH---ERMH 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++  AAR +H+  VI PAL  G  ++ DRF D+S+AYQ          +++L+  
Sbjct: 60  VETETLLMFAARREHIAEVIEPALARGAWVVSDRFTDASFAYQCGGRGVPCEKVEALEAW 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T++ D+PV+I + R      L  +   D FER+      + R  +L  A  
Sbjct: 120 VHPDLQPDLTLLFDVPVEISVAR------LAAARTPDKFERESAEFFRRIRNGYLARAEA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           QP R  ++D      +V   +L+I+ E 
Sbjct: 174 QPQRFRLIDGNRPMDTVRKEVLDIMREF 201


>gi|217077269|ref|YP_002334987.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
 gi|226732664|sp|B7IHT2|KTHY_THEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|217037124|gb|ACJ75646.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
          Length = 201

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 9/209 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T ++LL ++L+ K   V   REPGGT   E  R +LL   ++    
Sbjct: 1   MFIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIREILLDNNLN-INK 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE VI+P L  G  +L DRF DSS AYQG   +     + +L + +
Sbjct: 60  RSELLLFLASRAQLVEEVIKPHLKRGFFVLADRFSDSSIAYQGGARNIGVETVSTLNDFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD    +D+P  I ++R++++        LD  E++  +  EK R  +L +++ +
Sbjct: 120 TDNIYPDIVFYIDIPTKIAMERLKDK-------NLDRLEKEGQIFLEKVRNTYLKLSKLR 172

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            D   I+D   S  +V   I +IV + +Q
Sbjct: 173 -DNFFIIDGTKSIDNVFAEIKSIVEKHLQ 200


>gi|206977923|ref|ZP_03238810.1| thymidylate kinase [Bacillus cereus H3081.97]
 gi|206743829|gb|EDZ55249.1| thymidylate kinase [Bacillus cereus H3081.97]
 gi|324324020|gb|ADY19280.1| thymidylate kinase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 208

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDITFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|289449651|ref|YP_003475316.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184198|gb|ADC90623.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 212

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 115/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+FEGI+G+GKTT ++LL  +L+R+N  V V REPGGT   EA R +LLS    
Sbjct: 1   MRKGQLITFEGIDGSGKTTQLNLLADYLRRQNEAVVVLREPGGTELGEAVRSLLLSSKYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +E  +F AAR      VI PAL  GK +LCDRF+DS+ AYQG         L SL
Sbjct: 61  KMSDRSELYLFLAARAQLCNEVIAPALSLGKFVLCDRFIDSTIAYQGYGRGLDPATLKSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSL-RESACLDYFERKDVMIHEKRRQIFL 178
             ++   + P+ T  L +PV   ++R+  R  +L R  A  D+F +  V  ++       
Sbjct: 121 NSMATAGISPNITFYLRIPVATAVERMMVRDIALDRMEAQADHFRQAVVKGYDV------ 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A  +P R   + +  S +++   ILN V   + K
Sbjct: 175 -LAATEP-RFVTIKADQSIENIHEIILNEVRRFIYK 208


>gi|30260220|ref|NP_842597.1| thymidylate kinase [Bacillus anthracis str. Ames]
 gi|47525283|ref|YP_016632.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183064|ref|YP_026316.1| thymidylate kinase [Bacillus anthracis str. Sterne]
 gi|49480017|ref|YP_034384.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|52145185|ref|YP_081643.1| thymidylate kinase [Bacillus cereus E33L]
 gi|65317490|ref|ZP_00390449.1| COG0125: Thymidylate kinase [Bacillus anthracis str. A2012]
 gi|165872581|ref|ZP_02217213.1| thymidylate kinase [Bacillus anthracis str. A0488]
 gi|167635117|ref|ZP_02393434.1| thymidylate kinase [Bacillus anthracis str. A0442]
 gi|167641523|ref|ZP_02399771.1| thymidylate kinase [Bacillus anthracis str. A0193]
 gi|170688929|ref|ZP_02880131.1| thymidylate kinase [Bacillus anthracis str. A0465]
 gi|170707594|ref|ZP_02898047.1| thymidylate kinase [Bacillus anthracis str. A0389]
 gi|177655343|ref|ZP_02936872.1| thymidylate kinase [Bacillus anthracis str. A0174]
 gi|190568957|ref|ZP_03021858.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I]
 gi|196036358|ref|ZP_03103755.1| thymidylate kinase [Bacillus cereus W]
 gi|196041790|ref|ZP_03109080.1| dTMP kinase [Bacillus cereus NVH0597-99]
 gi|218901231|ref|YP_002449065.1| thymidylate kinase [Bacillus cereus AH820]
 gi|227812703|ref|YP_002812712.1| thymidylate kinase [Bacillus anthracis str. CDC 684]
 gi|228912770|ref|ZP_04076418.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228925284|ref|ZP_04088381.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228931533|ref|ZP_04094440.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228943837|ref|ZP_04106223.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229089163|ref|ZP_04220445.1| Thymidylate kinase [Bacillus cereus Rock3-42]
 gi|229119693|ref|ZP_04248955.1| Thymidylate kinase [Bacillus cereus 95/8201]
 gi|229603011|ref|YP_002864681.1| dTMP kinase [Bacillus anthracis str. A0248]
 gi|254682343|ref|ZP_05146204.1| thymidylate kinase [Bacillus anthracis str. CNEVA-9066]
 gi|254724171|ref|ZP_05185956.1| thymidylate kinase [Bacillus anthracis str. A1055]
 gi|254733566|ref|ZP_05191287.1| thymidylate kinase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254744666|ref|ZP_05202345.1| thymidylate kinase [Bacillus anthracis str. Kruger B]
 gi|254756371|ref|ZP_05208400.1| thymidylate kinase [Bacillus anthracis str. Vollum]
 gi|254762427|ref|ZP_05214269.1| thymidylate kinase [Bacillus anthracis str. Australia 94]
 gi|300119126|ref|ZP_07056827.1| thymidylate kinase [Bacillus cereus SJ1]
 gi|46576505|sp|Q81W11|KTHY_BACAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59798175|sp|Q63HH8|KTHY_BACCZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59798283|sp|Q6HPY6|KTHY_BACHK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808275|sp|C3P9H5|KTHY_BACAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808276|sp|C3LJ02|KTHY_BACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|30253541|gb|AAP24083.1| dTMP kinase [Bacillus anthracis str. Ames]
 gi|47500431|gb|AAT29107.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176991|gb|AAT52367.1| thymidylate kinase [Bacillus anthracis str. Sterne]
 gi|49331573|gb|AAT62219.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|51978654|gb|AAU20204.1| thymidylate kinase [Bacillus cereus E33L]
 gi|164711709|gb|EDR17254.1| thymidylate kinase [Bacillus anthracis str. A0488]
 gi|167510508|gb|EDR85906.1| thymidylate kinase [Bacillus anthracis str. A0193]
 gi|167529591|gb|EDR92341.1| thymidylate kinase [Bacillus anthracis str. A0442]
 gi|170127590|gb|EDS96464.1| thymidylate kinase [Bacillus anthracis str. A0389]
 gi|170667153|gb|EDT17914.1| thymidylate kinase [Bacillus anthracis str. A0465]
 gi|172080184|gb|EDT65277.1| thymidylate kinase [Bacillus anthracis str. A0174]
 gi|190559881|gb|EDV13865.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I]
 gi|195990988|gb|EDX54959.1| thymidylate kinase [Bacillus cereus W]
 gi|196027410|gb|EDX66027.1| dTMP kinase [Bacillus cereus NVH0597-99]
 gi|218540056|gb|ACK92454.1| thymidylate kinase [Bacillus cereus AH820]
 gi|227003623|gb|ACP13366.1| dTMP kinase [Bacillus anthracis str. CDC 684]
 gi|228663718|gb|EEL19296.1| Thymidylate kinase [Bacillus cereus 95/8201]
 gi|228694126|gb|EEL47807.1| Thymidylate kinase [Bacillus cereus Rock3-42]
 gi|228815794|gb|EEM62029.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228828085|gb|EEM73812.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228834331|gb|EEM79871.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228846830|gb|EEM91834.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|229267419|gb|ACQ49056.1| dTMP kinase [Bacillus anthracis str. A0248]
 gi|298723448|gb|EFI64189.1| thymidylate kinase [Bacillus cereus SJ1]
          Length = 208

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|254388750|ref|ZP_05003983.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC
           27064]
 gi|197702470|gb|EDY48282.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC
           27064]
          Length = 747

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 151 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 210

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV +V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 211 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 270

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 271 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 322

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P R  +VD+    ++V T +
Sbjct: 323 GDPARYLVVDAGQEPEAVTTVV 344


>gi|302559329|ref|ZP_07311671.1| dTMP kinase [Streptomyces griseoflavus Tu4000]
 gi|302476947|gb|EFL40040.1| dTMP kinase [Streptomyces griseoflavus Tu4000]
          Length = 854

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +H++ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHIDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARINR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P R  +VD+    +SV T I
Sbjct: 680 ADPGRYLVVDAGQEPESVTTVI 701


>gi|186475808|ref|YP_001857278.1| thymidylate kinase [Burkholderia phymatum STM815]
 gi|229487611|sp|B2JGP7|KTHY_BURP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|184192267|gb|ACC70232.1| dTMP kinase [Burkholderia phymatum STM815]
          Length = 206

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+   +  L++K       V +TREPGGT   E+ R +LL 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLGWFRDRLEQKVAPAGRSVVMTREPGGTKLGESLRDILLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  EAMD---LETEALLMFAARREHLAQVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+P D   +R   R + R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPDTASER---RSAAR---APDRFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DS  S   +   + +++
Sbjct: 172 YLRRAEEAPYRFAIIDSTRSIADIQKQLEDLI 203


>gi|229009541|ref|ZP_04166768.1| Thymidylate kinase [Bacillus mycoides DSM 2048]
 gi|228751685|gb|EEM01484.1| Thymidylate kinase [Bacillus mycoides DSM 2048]
          Length = 208

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKKEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+  + + RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARI-GKDAGREVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     +R  +V++    + +   ++ I+
Sbjct: 175 VVERFSNRIVLVNADQPMKKLIEEVVQII 203


>gi|91783552|ref|YP_558758.1| thymidylate kinase [Burkholderia xenovorans LB400]
 gi|123062899|sp|Q13YY3|KTHY_BURXL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91687506|gb|ABE30706.1| thymidylate kinase [Burkholderia xenovorans LB400]
          Length = 206

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+S  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  ++  +R   R + R+    D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEVASER---RSAARDP---DRFESESEAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DSA S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIAQIQRRLEELI 203


>gi|84495036|ref|ZP_00994155.1| thymidylate kinase [Janibacter sp. HTCC2649]
 gi|84384529|gb|EAQ00409.1| thymidylate kinase [Janibacter sp. HTCC2649]
          Length = 210

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 10/193 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+FEG +GAGK+T + LL   L+    +V VTR+PGGTP     R ++L    D
Sbjct: 1   MTQGLFIAFEGGDGAGKSTQVRLLAAALESLGREVVVTRQPGGTPLGAQIRDLVLHG--D 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA++FAA +  HV+ +IRPA+  G +++ DR+ DS+ AYQG         +  L
Sbjct: 59  HVSPRAEALLFAADKAHHVDQLIRPAMDRGSVVITDRYTDSAVAYQGAGRDLGASEVHEL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q  +V  ++PD T+I+D+    G +        R     D  E +    H+  R  FL +
Sbjct: 119 QMWAVGSLVPDLTVIVDVTAQEGRR--------RRGEVHDRLESEADAFHDAIRHHFLAM 170

Query: 181 ARNQPDRCHIVDS 193
           A+  P+R  +VD 
Sbjct: 171 AQGSPERYLVVDG 183


>gi|163938038|ref|YP_001642922.1| thymidylate kinase [Bacillus weihenstephanensis KBAB4]
 gi|229131038|ref|ZP_04259951.1| Thymidylate kinase [Bacillus cereus BDRD-ST196]
 gi|229165020|ref|ZP_04292816.1| Thymidylate kinase [Bacillus cereus AH621]
 gi|229487581|sp|A9VN43|KTHY_BACWK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|163860235|gb|ABY41294.1| dTMP kinase [Bacillus weihenstephanensis KBAB4]
 gi|228618405|gb|EEK75434.1| Thymidylate kinase [Bacillus cereus AH621]
 gi|228652375|gb|EEL08299.1| Thymidylate kinase [Bacillus cereus BDRD-ST196]
          Length = 208

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+  + + RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARI-GKDAGREVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     +R  +V++    + +   ++ I+
Sbjct: 175 VVERFSNRIVLVNADQPMKKLIEEVVQII 203


>gi|167755132|ref|ZP_02427259.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402]
 gi|237733442|ref|ZP_04563923.1| thymidylate kinase [Mollicutes bacterium D7]
 gi|167705182|gb|EDS19761.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402]
 gi|229383477|gb|EEO33568.1| thymidylate kinase [Coprobacillus sp. D7]
          Length = 206

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 5/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG +G+GKTT   ++   LQ + Y V +TREPGG   AE  R ++L        
Sbjct: 3   GKFITLEGPDGSGKTTVSKIVVEQLQMEGYKVLLTREPGGIDIAEQIRKIILDTNNITMD 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AAAR  H+   + PAL +G I++CDRF+DSS  YQG         +  + + 
Sbjct: 63  ARTEALLYAAARRQHLVEKVAPALNDGYIVICDRFVDSSLVYQGVGRKIGIEEVYQINQF 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD TI  DLP ++GL R+ N    R +  LD  E  D   H+     ++ I   
Sbjct: 123 AIGNIKPDATIFFDLPYEVGLARINN--GERVADRLD-LESDD--FHKDVYNGYMTICEK 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             +R   +D++ +   V   ++N++
Sbjct: 178 YAERITKIDASKTIDEVVAQVINVI 202


>gi|256852109|ref|ZP_05557496.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260661321|ref|ZP_05862234.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN]
 gi|282934782|ref|ZP_06340020.1| dTMP kinase [Lactobacillus jensenii 208-1]
 gi|256615521|gb|EEU20711.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260547776|gb|EEX23753.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN]
 gi|281301145|gb|EFA93451.1| dTMP kinase [Lactobacillus jensenii 208-1]
          Length = 215

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKTT +  L   +++K   ++ VTREPGG+  AEA R ++L+    E
Sbjct: 2   AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G+++  DRF+DSS AYQG     ++L ++ + 
Sbjct: 62  MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQG---MGRNLGIEKVA 118

Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           EI   +   + P+ T+ LD+    GL R+      +E    D  E++ +  H+K    + 
Sbjct: 119 EINQFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQ 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +I +  P+R  +VD++     V  + L I+ +
Sbjct: 175 EIVKRYPERIKVVDASQDIDQVIADCLAILKQ 206


>gi|14520694|ref|NP_126169.1| thymidylate kinase [Pyrococcus abyssi GE5]
 gi|13629362|sp|Q9V1E9|KTHY_PYRAB RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|5457910|emb|CAB49400.1| tmk thymidylate kinase (dTMP kinase) [Pyrococcus abyssi GE5]
          Length = 205

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 116/208 (55%), Gaps = 15/208 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G F+  EGI+G+GKTT   LL  + + + +DV +T+EP  T      R ++L   +    
Sbjct: 3   GYFVVLEGIDGSGKTTQAKLLAEWFEEQGWDVLLTKEPTDTEFGRLIRELVLKNSIIDGS 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EAEA++FAA R +HV+ VI PAL +GK+++CDR+L SS AYQ  R  S    L+ L
Sbjct: 63  RISYEAEALLFAADRAEHVKKVILPALEKGKVVICDRYLYSSLAYQWARGLS----LEWL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+     PD  I+LDLPV   ++R + R ++ E   L   +RK  M + K  ++F ++
Sbjct: 119 MQINSFAPRPDLAILLDLPVKESIRRTKARGNMSEFDKLLELQRKVRMNYLKLAEMFKEM 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
                    IV++  S + V  +I+ +V
Sbjct: 179 --------RIVNAMASVEEVHEDIVALV 198


>gi|217957606|ref|YP_002336148.1| thymidylate kinase [Bacillus cereus AH187]
 gi|228983286|ref|ZP_04143500.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229136875|ref|ZP_04265503.1| Thymidylate kinase [Bacillus cereus BDRD-ST26]
 gi|229153810|ref|ZP_04281941.1| Thymidylate kinase [Bacillus cereus ATCC 4342]
 gi|229194421|ref|ZP_04321225.1| Thymidylate kinase [Bacillus cereus m1293]
 gi|226732653|sp|B7HPU1|KTHY_BACC7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|217067456|gb|ACJ81706.1| thymidylate kinase [Bacillus cereus AH187]
 gi|228589011|gb|EEK47025.1| Thymidylate kinase [Bacillus cereus m1293]
 gi|228629614|gb|EEK86310.1| Thymidylate kinase [Bacillus cereus ATCC 4342]
 gi|228646540|gb|EEL02746.1| Thymidylate kinase [Bacillus cereus BDRD-ST26]
 gi|228776400|gb|EEM24752.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 208

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|42779109|ref|NP_976356.1| thymidylate kinase [Bacillus cereus ATCC 10987]
 gi|59798342|sp|Q73FH8|KTHY_BACC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|42735024|gb|AAS38964.1| thymidylate kinase [Bacillus cereus ATCC 10987]
          Length = 208

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDITFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|257069727|ref|YP_003155982.1| thymidylate kinase [Brachybacterium faecium DSM 4810]
 gi|256560545|gb|ACU86392.1| thymidylate kinase [Brachybacterium faecium DSM 4810]
          Length = 243

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 19/216 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL--QRKNYD--VHVTREPGGTPAAEAARHVLLSCGV 59
           G+FISFEG +GAGK+T + LL   L  +R   +  +  TREPGGT   E+ R +LL    
Sbjct: 21  GVFISFEGGDGAGKSTQMQLLHDHLVTERSVAEDLILTTREPGGTALGESIRELLLHG-- 78

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLF 116
           ++    AEA+++AA R  HV  V+RP L  G ++L DR+LDSS AYQG   E D+ +   
Sbjct: 79  EDVDVRAEALLYAADRAHHVSTVVRPHLARGGLVLGDRYLDSSVAYQGAGRELDAEE--- 135

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + +L   +V  ++P  TI+LD+P        Q     R SA  D  E   +  HE  R+ 
Sbjct: 136 ITTLSLWAVDGLLPHRTILLDVP-------PQTLDERRGSAGRDRLESAGLEFHEAVRRE 188

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           FLD+A+  P+R  ++D     + V   +L  V E++
Sbjct: 189 FLDLAQADPERYAVIDGTLPPEEVHDQVLAAVGEVL 224


>gi|217967176|ref|YP_002352682.1| dTMP kinase [Dictyoglomus turgidum DSM 6724]
 gi|217336275|gb|ACK42068.1| dTMP kinase [Dictyoglomus turgidum DSM 6724]
          Length = 207

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 109/191 (57%), Gaps = 11/191 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + LFI+FEGI+G+GKTT   LLK   + K Y VH+TREPGGT      R +LL+    
Sbjct: 1   MKNNLFITFEGIDGSGKTTQALLLKEHFESKGYKVHLTREPGGTDVGNKIREILLNPAFS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA ++ A+R+++  N+I+  L E  +++C+R+ DS+ AYQG   +     L  +
Sbjct: 61  -INYWTEAFLYLASRVENTINIIK-KLKENYVVICERYADSTLAYQGYGRNLPLELLVEM 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+   + P+ TI++DL  ++ L+R             D  ER+++  + K R+ +L+I
Sbjct: 119 NQIATFGLKPNLTILIDLDPELALRR---------KKSFDRIERENIEFYYKVRKGYLEI 169

Query: 181 ARNQPDRCHIV 191
           A+ + +R  I+
Sbjct: 170 AKKEKERFIII 180


>gi|228478159|ref|ZP_04062767.1| thymidylate kinase [Streptococcus salivarius SK126]
 gi|228249838|gb|EEK09108.1| thymidylate kinase [Streptococcus salivarius SK126]
          Length = 209

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKTT + +LL R  +     V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTTVLEALLPRLREVYPAQVVTTREPGGVAIAEQIREVILDVNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L +G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L         PD T++ D+  + GL R+      RE   LD  E+ D  +H++ RQ +LD
Sbjct: 121 LNAYVTDGYKPDVTLLFDVDSETGLARIAASGE-REVNRLD-LEKLD--LHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A+ +P+R  ++D++ +F+ V      ++
Sbjct: 177 LAKAEPERIKLIDASQAFEDVVEQAWKVI 205


>gi|209517025|ref|ZP_03265873.1| dTMP kinase [Burkholderia sp. H160]
 gi|209502556|gb|EEA02564.1| dTMP kinase [Burkholderia sp. H160]
          Length = 206

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+   +  L+ K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRAVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DLP  +  +R   R + R     D FE +     E+ R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDLPPAVANER---RSAARNP---DRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++  A   P R  I+DS+ S   +   +  ++
Sbjct: 172 YMRRAEEAPHRFAIIDSSQSIARIQKQLDELI 203


>gi|119963206|ref|YP_946682.1| thymidylate kinase [Arthrobacter aurescens TC1]
 gi|119950065|gb|ABM08976.1| thymidylate kinase [Arthrobacter aurescens TC1]
          Length = 229

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 7/217 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+FEG +GAGK+T  + L   L+ +   V  TREPGGTP  E  R ++L  G   
Sbjct: 5   SPGLFIAFEGGDGAGKSTQAARLSDALESQGLSVLRTREPGGTPIGEKLRSLVLDHGNGT 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H   VIRPAL  G +++ DR++DSS AYQG         + SL 
Sbjct: 65  IDPRTEALMFAAARAAHASQVIRPALAGGTVVITDRYIDSSVAYQGAGRGLGAEGVLSLN 124

Query: 122 EISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E + + + PD T++LD+ P D   +R          A  D  E +    H   R  FLD+
Sbjct: 125 EWATEGLHPDLTVLLDVDPSDGRQRRTAG------DATEDRLESEPDHFHSAIRHAFLDL 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A   P    ++ ++   +++A  IL  V  L+  R+S
Sbjct: 179 AAAAPSSYLVLAASADIETLAAQILERVETLLGDRIS 215


>gi|88859588|ref|ZP_01134228.1| thymidylate kinase [Pseudoalteromonas tunicata D2]
 gi|88818605|gb|EAR28420.1| thymidylate kinase [Pseudoalteromonas tunicata D2]
          Length = 209

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 13/202 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG+EGAGK+T I+L +  L+    +   TREPGGTP AE+ R+++ +   +   AE
Sbjct: 5   FIVIEGLEGAGKSTAIALCQEILKAHQVNFVNTREPGGTPLAESLRNLVKATHQEIMSAE 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSLQE 122
           AE ++  AAR   + NVIRPAL  G+ +L DR   SS AYQG   E DSS    L++L  
Sbjct: 65  AELLIMYAARAQLLTNVIRPALANGQWVLGDRHNLSSLAYQGGGRELDSST---LNALSN 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I ++ + PD TI LD+   +GL R   R        LD  E++ +   E+ R  +L IA 
Sbjct: 122 IVLKGLKPDLTIYLDIDPAVGLARAAGR------GALDRIEQEQLSFFERTRAQYLAIAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
           + P    +V +     +V  +I
Sbjct: 176 SDPS-IKVVQAGQEISAVHQDI 196


>gi|116511255|ref|YP_808471.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11]
 gi|122940342|sp|Q031S3|KTHY_LACLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116106909|gb|ABJ72049.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11]
          Length = 211

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   +V  TREPGG   AE  R ++L     E 
Sbjct: 2   NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++F AAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFEAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +   + PD T+  D+  D+ L+R+ +NR    E   LD  ER +  +H K R+ +L+I 
Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P+R   +D++ S + V  + L ++
Sbjct: 177 AKEPERFVKIDASQSLEKVVADTLEVL 203


>gi|281490940|ref|YP_003352920.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
 gi|281374698|gb|ADA64218.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
          Length = 211

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   ++  TREPGG   AE  R ++L     E 
Sbjct: 2   NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++FAAAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +   + PD T+  D+  D+ L+R+ +NR    E   LD  ER +  +H K R+ +L+I 
Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P+R   +D++   + V  + L+++
Sbjct: 177 VKEPERFVKIDASQPLEKVVADTLSVL 203


>gi|220906428|ref|YP_002481739.1| dTMP kinase [Cyanothece sp. PCC 7425]
 gi|254808287|sp|B8HXT9|KTHY_CYAP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219863039|gb|ACL43378.1| dTMP kinase [Cyanothece sp. PCC 7425]
          Length = 234

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 15/219 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-------------DVHVTREPGGTPAAEAA 50
           G  I FEG EG+GKTT +   +++L+   +              + VTREPGGT      
Sbjct: 3   GKLIVFEGGEGSGKTTQLQRSRQWLESSGWLARLQQTLPTLAKPLLVTREPGGTALGIKL 62

Query: 51  RHVLLSCGV-DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           R +LL+    D   +  E ++FAA R  HV   ++P L  G ++LCDRF DS+ AYQG  
Sbjct: 63  RQLLLNSDPEDVIQSRTELLLFAADRAQHVATRLQPHLEAGGLILCDRFTDSTVAYQGYG 122

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +D L +I+   +  D T+ LDL V++GL+R + R   +    LD  ER ++  
Sbjct: 123 RGLSLALIDQLNQIATDGLTSDLTLWLDLDVEMGLERSRQRLQ-QSGGGLDRIERGEIAF 181

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           H++ +Q F  +++  P+R   +D++     VA  I  I+
Sbjct: 182 HQRVQQGFRALSQAAPERIVTIDASQPEAMVADKIQRIL 220


>gi|239943104|ref|ZP_04695041.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 15998]
          Length = 1042

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 469 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 528

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 529 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 588

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD  VD    R       R +   D  E +    HE+ R  FL +A 
Sbjct: 589 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAEFHERVRSGFLTLAA 640

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    +S+ T
Sbjct: 641 ADPTRYLVVDAGQEPESITT 660


>gi|330686068|gb|EGG97690.1| dTMP kinase [Staphylococcus epidermidis VCU121]
          Length = 203

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 114/195 (58%), Gaps = 8/195 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT +  +   L  ++YDV  TREPGG P  E  R V+L    ++    
Sbjct: 4   FITFEGPEGSGKTTVLKAVAEKLA-QHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   +I+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+ +  + R+   LD   ++D+  HEK  + +  +  N+P
Sbjct: 121 NGLYPDLTIYLDVSAEVGRERILS--NQRDQNRLD---QEDIDFHEKVIEGYHQVIHNEP 175

Query: 186 DRCHIVDSAHSFQSV 200
           +R   +D+  S + V
Sbjct: 176 ERFVQIDADQSIEEV 190


>gi|229053878|ref|ZP_04195313.1| Thymidylate kinase [Bacillus cereus AH603]
 gi|228721419|gb|EEL72939.1| Thymidylate kinase [Bacillus cereus AH603]
          Length = 208

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIGKDVG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     +R  +V++    + +   ++ I+
Sbjct: 175 VVERFSNRIVLVNADQPMKKLIEEVVQII 203


>gi|331701730|ref|YP_004398689.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929]
 gi|329129073|gb|AEB73626.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929]
          Length = 216

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ +++ F Q     + VTREPGG   +E  R V+L     E
Sbjct: 2   NGKFITFEGPDGAGKTSVMNRVIEVFNQEIGDQLLVTREPGGNKISEEIRKVILDRENTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL + K++LCDR++DSS AYQG         +  + 
Sbjct: 62  MDYRTEALLYAAARRQHLVETILPALKQNKLVLCDRYVDSSVAYQGAGRQIGMAQVAKMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + ++++P  TI  D+PVD+GL R+      R+ + +D  + +    H++  + ++ + 
Sbjct: 122 EFATEKLLPFKTIYFDIPVDVGLDRIAEH---RDRSKIDRLDVETNEFHKRVHEGYMKVR 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               DR   +D+      V  + + I+ ++
Sbjct: 179 DENADRFISIDATQPINRVVNDTIKIIHQI 208


>gi|295395540|ref|ZP_06805734.1| integral membrane protein with kinase activity [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971559|gb|EFG47440.1| integral membrane protein with kinase activity [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 824

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 123/209 (58%), Gaps = 11/209 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD 60
           ++GLFI+ EG +GAGKTT I  L   L+ + +D V  TREPGGTP  ++ R VLL    +
Sbjct: 472 STGLFIAIEGGDGAGKTTQIRKLVEHLESRGFDPVIATREPGGTPVGKSIRSVLLDG--E 529

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119
               ++EA+++AA R  HV  ++ P+L +   ++ DR++DSS AYQ G R+ S+   L +
Sbjct: 530 AVSKKSEALLYAADRAHHVATLVAPSLEQDGAVVTDRYIDSSLAYQAGGRELSEDDVL-A 588

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++P+ T++LD+   +  +R+ N    RE A  ++ +++ +   ++ R  FL 
Sbjct: 589 LSRWATSGLVPNLTLVLDIDPRVAAERMGN----REDA--NHLDKQSLEFKDRVRAGFLR 642

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A  +PDR  ++ +  S   VA +I  +V
Sbjct: 643 LAEAEPDRYAVIPAGRSVNEVAEHIQRVV 671


>gi|190571302|ref|YP_001975660.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018699|ref|ZP_03334507.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238057702|sp|B3CM94|KTHY_WOLPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|190357574|emb|CAQ55013.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995650|gb|EEB56290.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 205

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 110/189 (58%), Gaps = 15/189 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL  + ++     +V +TREPGGT  AE  R  LL   +D  
Sbjct: 1   MFITFEGIDGSGKTTQSELLANYFKQIHGENNVVLTREPGGTDFAEKIRGSLLKDNIDPI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++F + R +H++ +I PAL EGK ++CDRF+DS+ AYQG         +  L +
Sbjct: 61  ---SELLLFTSMRYEHMKELILPALKEGKTVICDRFIDSTIAYQGYGLGVDLSLIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V+   PD T ILD+ V +GL R +++         + +E   +  + K R+ F +IA 
Sbjct: 118 L-VEIKYPDITFILDIDVQVGLSRAKDK---------NKYEEMSIDFYHKIRKGFQEIAI 167

Query: 183 NQPDRCHIV 191
            + +RC+++
Sbjct: 168 KESNRCNVI 176


>gi|209527775|ref|ZP_03276269.1| dTMP kinase [Arthrospira maxima CS-328]
 gi|209491808|gb|EDZ92169.1| dTMP kinase [Arthrospira maxima CS-328]
          Length = 231

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 25/229 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50
           +G  I FEGIEG GKTT I  ++ +L  +               V VTREPGGT   +  
Sbjct: 2   AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSSGGKLHQRGVQVTREPGGTQLGQHL 61

Query: 51  RHVLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           R +LL   + E     +E +++AA R  H+E +I+P L +G I+LCDRF DS+ AYQG  
Sbjct: 62  RDLLLHHDIREPLSDRSELLLYAADRAQHIETLIKPLLDQGTIILCDRFTDSTLAYQGYG 121

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +  + +I+   V+PD T+ L++PV+ GL R++ R        +D  E+ D+  
Sbjct: 122 RGLDLQQIHQINQIATGGVVPDLTLWLNVPVEAGLTRIKARKK------VDRIEQADLEF 175

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV------WELV 212
           H +  + F  +A+  P R   +D       V   I NI+      W L+
Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKLLEWGLI 224


>gi|313902253|ref|ZP_07835659.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965]
 gi|313467483|gb|EFR62991.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965]
          Length = 250

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 9/201 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG+GK+T  +++  +L+ +     + REPGGT A       LL  G     
Sbjct: 47  GWFITLEGGEGSGKSTQAAVVMDWLRSRGIPSRLVREPGGT-ALGERLRELLLDGAGRPV 105

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++FAAAR   VE VI PAL+ G+ ++CDR++DSS AYQG         + S+  +
Sbjct: 106 PMAEMLMFAAARAQLVETVILPALLAGETVVCDRYVDSSLAYQGAGLGLGGTTVWSVNRL 165

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + ++PD T++ D P D+       R  LR  A  D  E +D   H + RQ +LD+AR 
Sbjct: 166 ATRGLLPDLTLLFDCPPDVA------RARLRRPA--DGIESRDTGFHHRVRQGYLDLARA 217

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
           +P R  ++D+      VA  +
Sbjct: 218 EPRRIVVIDATRPALVVAEAV 238


>gi|70727528|ref|YP_254444.1| thymidylate kinase [Staphylococcus haemolyticus JCSC1435]
 gi|123659174|sp|Q4L3D9|KTHY_STAHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|68448254|dbj|BAE05838.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 203

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 12/210 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           FI+FEG EG+GKTT   +L+R  ++  ++Y +  TREPGG P  E  R V+L        
Sbjct: 4   FITFEGPEGSGKTT---VLQRVSEKLAQDYQLIATREPGGVPTGEEIRKVVLEGA--NMD 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         +  L + 
Sbjct: 59  IRTEAMLFAASRREHLVEKVVPALNDNKIVLCDRYIDSSLAYQGYARGIGIEEVKQLNDF 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD TI LD+  ++G  R+     L+     +  +++D+  HEK  + +  I + 
Sbjct: 119 AINGLYPDLTIYLDITAEVGRDRI-----LKNQRDQNRLDKEDIAFHEKVIEGYRQIIQE 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            P R  +VD+  +   V      I+   ++
Sbjct: 174 TPQRFAVVDATRNIDDVVNETYEIILNFLK 203


>gi|290958517|ref|YP_003489699.1| thymidylate kinase [Streptomyces scabiei 87.22]
 gi|260648043|emb|CBG71151.1| putative thymidylate kinase [Streptomyces scabiei 87.22]
          Length = 1110

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 508 TGFFIALEGGDGAGKSTQVEALAEWVRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    HE+ R  FL +A 
Sbjct: 628 WATDGLVPHLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHERVRAGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
               R  +VD+A   ++V T
Sbjct: 680 ADAGRYLVVDAAQDPEAVTT 699


>gi|291446581|ref|ZP_06585971.1| integral membrane protein with kinase activity [Streptomyces
           roseosporus NRRL 15998]
 gi|291349528|gb|EFE76432.1| integral membrane protein with kinase activity [Streptomyces
           roseosporus NRRL 15998]
          Length = 1070

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 557 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD  VD    R       R +   D  E +    HE+ R  FL +A 
Sbjct: 617 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAEFHERVRSGFLTLAA 668

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    +S+ T
Sbjct: 669 ADPTRYLVVDAGQEPESITT 688


>gi|225024056|ref|ZP_03713248.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC
           23834]
 gi|224943081|gb|EEG24290.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC
           23834]
          Length = 205

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 7/188 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGKTT +++++ +   +   V  TREPGGTP  EA R +LL+    + G  
Sbjct: 5   FITLDGIDGAGKTTQLAVIREWFAAQERPVLFTREPGGTPLGEALRRLLLNPKT-QAGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR  H+E+VI PAL +   ++ DRF D+++AYQG         +  L++   
Sbjct: 64  AETLLMFAARAQHIESVILPALEDDVSVVSDRFTDATFAYQGGGRGLPEADIAQLEQWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P  TI+LD+P+++ L R++       S   D FE+++     + RQ +L+ A   P
Sbjct: 124 GNLRPSLTILLDVPLEVSLARIER------SRNKDRFEQEEADFFTRVRQSYLERAAAAP 177

Query: 186 DRCHIVDS 193
           +R  +++S
Sbjct: 178 ERYTVINS 185


>gi|218294864|ref|ZP_03495718.1| dTMP kinase [Thermus aquaticus Y51MC23]
 gi|218244772|gb|EED11296.1| dTMP kinase [Thermus aquaticus Y51MC23]
          Length = 201

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 17/205 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG++G+GK+T   LL  FL+ +   V +TREPGG       R +LL+      
Sbjct: 2   AGLFLTLEGLDGSGKSTQAKLLAAFLEGRGLPVVLTREPGG--GLPGVRDLLLNPLKGPL 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++ +A R +HV  VI P+L  G  ++ DR+LDSS AYQG     + L L  L E
Sbjct: 60  SPEAEYLLLSADRAEHVRKVILPSLEAGAWVVSDRYLDSSLAYQG---FGRGLPLPWLLE 116

Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++ +  +   P  T +LDLP +  L+RV++          D  ER+ +   ++ R+ +L 
Sbjct: 117 VAKEATLGLTPRLTFLLDLPPEEALRRVKDP---------DRLEREGLAFFQRVREGYLF 167

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A+ +P R  ++D+  S ++VA  I
Sbjct: 168 LAKEEPHRFVVLDATESVEAVAQRI 192


>gi|294340171|emb|CAZ88543.1| putative thymidylate kinase [Thiomonas sp. 3As]
          Length = 215

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 114/211 (54%), Gaps = 9/211 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFIS EGI+GAGK+T +  +   L+  N  V +TREPGGT   E  R +LL    +   
Sbjct: 10  GLFISLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLH---ETMR 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++  AAR +HV  VI PAL+ G  ++CDRF  ++ AYQG         L++L   
Sbjct: 67  PATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALARW 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PDC I++D+P ++  +R      L ++   D FE++ V    + R  +L  A +
Sbjct: 127 VHPGLCPDCIILIDVPPEVAAQR------LEQTRQRDRFEQESVDFFARVRANYLQQAAS 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P++  ++D   + ++V   I   + +++Q+
Sbjct: 181 SPEKWRVIDGTQTPEAVQKTITGYLNKVLQE 211


>gi|254733599|ref|ZP_05191318.1| thymidylate kinase [Bacillus anthracis str. Western North America
           USA6153]
          Length = 207

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADPPMEKLIEEVIQVI 203


>gi|254172680|ref|ZP_04879355.1| thymidylate kinase [Thermococcus sp. AM4]
 gi|214033609|gb|EEB74436.1| thymidylate kinase [Thermococcus sp. AM4]
          Length = 227

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 18/211 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G+F+  EGI+GAGK+T   LL ++ +RK Y+V +T+EP  T   +  R ++L+ G +   
Sbjct: 21  GIFVVIEGIDGAGKSTQAKLLAKWFERKGYEVVLTKEPTDTAFGKLIRKLVLTGGREGII 80

Query: 63  -GA----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            GA    EAEA++FAA R +HV  +IRPAL  GK+++ DR+  SS AYQ  R       +
Sbjct: 81  DGARISHEAEALLFAADRAEHVHKLIRPALESGKVVISDRYFYSSLAYQWARGLDLQWLI 140

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D L   +V+   PD  ++LDLPV   ++R+  R    E      F+ K + + +K R+ +
Sbjct: 141 D-LNRFAVR---PDLVVLLDLPVKESMRRINGRSIKTE------FD-KILELQKKVRENY 189

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L +A   P+   IV++ +S + +  +I+ +V
Sbjct: 190 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLV 219


>gi|328883355|emb|CCA56594.1| Permeases of the major facilitator superfamily or Thymidylate
           kinase [Streptomyces venezuelae ATCC 10712]
          Length = 1162

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 535 TGFFIALEGGDGAGKSTQVQALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 594

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++++RPAL  G I+L DR++DSS AYQG         +  +  
Sbjct: 595 SNRAEALLYAADRAEHVDSLVRPALERGAIVLSDRYIDSSVAYQGAGRDLSPTEIARISR 654

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 655 WATDGLVPHLTVVLDVSPETARERF--------TEAPDRLESEPPEFHARVRAGFLALAA 706

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    ++V T
Sbjct: 707 ADPSRYLVVDAGQEPEAVTT 726


>gi|46199545|ref|YP_005212.1| thymidylate kinase [Thermus thermophilus HB27]
 gi|55981576|ref|YP_144873.1| thymidylate kinase [Thermus thermophilus HB8]
 gi|59798322|sp|Q72I89|KTHY_THET2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920831|sp|Q5SHX3|KTHY_THET8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46197171|gb|AAS81585.1| probable thymidylate kinase [Thermus thermophilus HB27]
 gi|55772989|dbj|BAD71430.1| probable thymidylate kinase (TMP kinase) [Thermus thermophilus HB8]
          Length = 198

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 20/205 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG++G+GKTT    L  FL+ +   V +TREPGG       R +LL+    E 
Sbjct: 2   PGLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGG--GLPEVRSLLLT---QEL 56

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++F+A R +HV  VI P L  GK+++ DR+LDSS AYQG     + L L  L+E
Sbjct: 57  SPEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQG---YGRGLPLPWLRE 113

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   + + + P  T +LDLP +  L+RV+    L E   L++F R         R+ +L 
Sbjct: 114 VAREATRGLKPRLTFLLDLPPEAALRRVRRPDRL-EGLGLEFFRRV--------REGYLA 164

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +AR +P R  ++D+    + +A  I
Sbjct: 165 LARAEPGRFVVLDATLPEEEIARAI 189


>gi|328956615|ref|YP_004374001.1| thymidylate kinase [Carnobacterium sp. 17-4]
 gi|328672939|gb|AEB28985.1| thymidylate kinase [Carnobacterium sp. 17-4]
          Length = 211

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 4/208 (1%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+ EG +GAGKT+ I  L+   ++    D+  TREPGG+  AE  R ++L+    E 
Sbjct: 3   GTFITIEGPDGAGKTSVIKKLIPMLVKAVQQDIVATREPGGSRIAEEIRELILNPTNTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  H+   I PAL  GK+++CDRF+DSS AYQG         +  + +
Sbjct: 63  DIRTEALLYAAGRRQHLVEKIIPALKAGKVVVCDRFVDSSLAYQGVARGIGISEVAEINQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + PD T+ LD+    GL+R+      +E+   D  +++ +  HEK R  +L IA 
Sbjct: 123 FATENLSPDLTLYLDIEAHAGLERINLN---KENRQFDRLDQETLEFHEKVRSAYLKIAN 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +R   +D++   ++V      ++ E
Sbjct: 180 EHTERIVQIDASQDLETVVEQCYQVIIE 207


>gi|94970254|ref|YP_592302.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345]
 gi|94552304|gb|ABF42228.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345]
          Length = 217

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F++FEG++G GK+T + +L   L+R   DV  TREPGGTP  E  R V+L        
Sbjct: 6   GKFLTFEGLDGCGKSTQMEMLAEVLRRDGIDVVTTREPGGTPTGEKIRSVILDSKTRFLH 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
             AE  +  AAR  H+  +++P+L  G+ +LCDRF DSS AYQ G R     L LD + +
Sbjct: 66  PMAELALMFAARAQHIAEIVQPSLEAGRWVLCDRFTDSSEAYQGGGRQMGSQLILD-MHK 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDI 180
           I   ++ P+ TI++D   +  + R + R     +  +D   FER+ +   ++ R  +  I
Sbjct: 125 IVCGDLWPEMTILMDSDPEASVARARRRNRANATDGVDENRFEREKIEFFQRVRDAYNAI 184

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A  +P R + VD+  S       I+  V E
Sbjct: 185 ADREPQRVYKVDARRSKDVTHPEIVRAVRE 214


>gi|297627199|ref|YP_003688962.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922964|emb|CBL57546.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 212

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F+ FEG +G GK+T + LL   L        VTREPGGTP  +  R +LL     +  
Sbjct: 8   GWFVVFEGGDGVGKSTQVELLADALADAGVSHLVTREPGGTPLGDNIRELLLDPASGDVA 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA +  H+  V+ PAL  GK+++CDR+LDS  AYQG     +   +  + + 
Sbjct: 68  PRAEALLYAADKAQHLHEVVVPALAAGKVVVCDRYLDSMLAYQGAGRVLELREVADIADW 127

Query: 124 SVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + + + PD T++LDL  D  +G+K  ++R            E+  V  H + RQ FLD+A
Sbjct: 128 ATRGLRPDLTVLLDLDPDEAVGMKEHKDR-----------LEQAGVEFHRRVRQGFLDLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
              P+R  ++      +  A  +
Sbjct: 177 NADPERYLVLPGRQGREWAAGRV 199


>gi|62185123|ref|YP_219908.1| thymidylate kinase [Chlamydophila abortus S26/3]
 gi|73920816|sp|Q5L5Y4|KTHY_CHLAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|62148190|emb|CAH63947.1| thymidylate kinase [Chlamydophila abortus S26/3]
          Length = 211

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +   V  TREPGG+   E  R  +L     E   
Sbjct: 1   MFIVIEGCEGSGKSSLTQLLKDKLMAEGKAVVATREPGGSSLGERVRDWILDPSTTELSP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
             E  +F AAR  H+   I PAL  GKI++CDRF DS+  YQG        ++ +L    
Sbjct: 61  YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  ++++P+ T +LD+P D GLKR Q + S       D FE + +  H K R+ FL +A 
Sbjct: 121 VGQKKILPNLTCLLDIPADEGLKRKQQQKS------FDKFENQSLAYHTKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ D   ++D+    +     ++    EL
Sbjct: 175 SRLDSYLVLDARQPIEESLNKVMTAYTEL 203


>gi|294630603|ref|ZP_06709163.1| thymidylate kinase [Streptomyces sp. e14]
 gi|292833936|gb|EFF92285.1| thymidylate kinase [Streptomyces sp. e14]
          Length = 822

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL      
Sbjct: 508 SSGFFIALEGGDGAGKSTQAEALADWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSQG 567

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  + 
Sbjct: 568 LSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 627

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A
Sbjct: 628 RWATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHARVRAGFLALA 679

Query: 182 RNQPDRCHIVDSAHSFQSVAT 202
              P R  +VD+    ++V T
Sbjct: 680 AADPGRYLVVDAGQEPEAVTT 700


>gi|315221919|ref|ZP_07863830.1| thymidylate kinase [Streptococcus anginosus F0211]
 gi|315188885|gb|EFU22589.1| thymidylate kinase [Streptococcus anginosus F0211]
          Length = 212

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FIS EG +GAGK++ +  L   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MAKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   I PAL  G+++L DRF+DSS AYQG     +   +D L
Sbjct: 61  EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+      +E    D  +R+ V  H + R+ +L I
Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAKS---KERGA-DRLDRESVEWHRRVREGYLSI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +P+R   +D++   + V  + L ++ E V+
Sbjct: 177 LEKEPNRVRKIDASQPLEKVVADTLAVLAERVE 209


>gi|222093800|ref|YP_002527849.1| thymidylate kinase [Bacillus cereus Q1]
 gi|254808278|sp|B9IZB3|KTHY_BACCQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221237847|gb|ACM10557.1| thymidylate kinase [Bacillus cereus Q1]
          Length = 208

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNKDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|88798792|ref|ZP_01114375.1| Thymidylate kinase [Reinekea sp. MED297]
 gi|88778555|gb|EAR09747.1| Thymidylate kinase [Reinekea sp. MED297]
          Length = 206

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 6/206 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           S  FI+ EG+EGAGKTT   +L  +L  +      TREPGGTP AE  R ++L+   +  
Sbjct: 2   SAQFITIEGLEGAGKTTQAEVLCNWLTDRGISFVRTREPGGTPIAEKIRDLVLAHHDERM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  HVE +I+PAL+ G+ ++ DRF D++YAYQG   S    ++  L++
Sbjct: 62  DPYTELLMVFAARQQHVETLIKPALVNGQWVVSDRFTDATYAYQGGGRSLGANYIQQLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T   D     GL R + R S      LD  E++ +    + R  +   A 
Sbjct: 122 LVLGGFQPDTTFWFDCDAQTGLNRARARGS------LDRIEQEALSFFNRARAAYEQRAL 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            QP R   +D++ + ++V+  ++  +
Sbjct: 176 QQPQRFVRLDASQTVEAVSEQLIQAL 201


>gi|17232200|ref|NP_488748.1| thymidylate kinase [Nostoc sp. PCC 7120]
 gi|23821788|sp|Q8YN62|KTHY_ANASP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|17133845|dbj|BAB76407.1| thymidylate kinase [Nostoc sp. PCC 7120]
          Length = 211

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG+EG GKT+ + L   +LQ     V +TREPGGT      R +LL    D+ 
Sbjct: 2   GGRFIVFEGVEGCGKTSQMQLCAEWLQSLGISVVLTREPGGTELGLDLRRLLLQKAEDKP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            AE  E +++AA R  HV   ++P L +GK +LCDR++DS+ AYQG   +     +  L 
Sbjct: 62  IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +I+   +  D TI LD+ V++GL R +      ++  LD  E++ +  H + +Q + D+A
Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----DNVGLDRIEQETIAFHRRVQQGYADLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            + P R   VD   S ++V   I  I+
Sbjct: 177 ASSPKRIIRVDGQLSKETVHKTIQEIL 203


>gi|27469219|ref|NP_765856.1| dTMP kinase [Staphylococcus epidermidis ATCC 12228]
 gi|57866011|ref|YP_187716.1| thymidylate kinase [Staphylococcus epidermidis RP62A]
 gi|251809790|ref|ZP_04824263.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875412|ref|ZP_06284284.1| dTMP kinase [Staphylococcus epidermidis SK135]
 gi|293366124|ref|ZP_06612811.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258101|sp|Q8CQT7|KTHY_STAES RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920830|sp|Q5HRS3|KTHY_STAEQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|27316768|gb|AAO05943.1|AE016751_238 dTMP kinase [Staphylococcus epidermidis ATCC 12228]
 gi|57636669|gb|AAW53457.1| thymidylate kinase [Staphylococcus epidermidis RP62A]
 gi|251806658|gb|EES59315.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295769|gb|EFA88291.1| dTMP kinase [Staphylococcus epidermidis SK135]
 gi|291319718|gb|EFE60077.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723942|gb|EGG60467.1| dTMP kinase [Staphylococcus epidermidis VCU144]
 gi|329733036|gb|EGG69375.1| dTMP kinase [Staphylococcus epidermidis VCU028]
 gi|329737878|gb|EGG74106.1| dTMP kinase [Staphylococcus epidermidis VCU045]
          Length = 203

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 12/197 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           FI+FEG EGAGKT   S++K+  +R  K YD+  TREPGG   +E  R ++L    D   
Sbjct: 4   FITFEGPEGAGKT---SVIKKVSERLAKEYDIVTTREPGGVLTSEEIRRIVLDG--DSID 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA+R +H+   I P+L  GKI+LCDR++DSS AYQG         +  L E 
Sbjct: 59  IRTEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEF 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD TI LD+  +IG +R+     L+ +   +  ++++   HEK  + +  +  +
Sbjct: 119 AINGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEEKAFHEKVIEGYQKVISD 173

Query: 184 QPDRCHIVDSAHSFQSV 200
            P R   V++ HS   V
Sbjct: 174 NPHRFIKVNANHSLDKV 190


>gi|312869713|ref|ZP_07729860.1| dTMP kinase [Lactobacillus oris PB013-T2-3]
 gi|311094762|gb|EFQ53059.1| dTMP kinase [Lactobacillus oris PB013-T2-3]
          Length = 218

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ +  +++ L  Q     V  TREPGG   +E  R VL S    +
Sbjct: 7   GKFISFEGPDGAGKTSVLRAIQQQLVDQLGADRVMYTREPGGNHISEQIRQVLFSPENTD 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDR++DSS AYQG         +  + 
Sbjct: 67  MDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRHLGEQVIWQMN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  ++PD TI LD+  ++GL+R+        +  ++  + + +  H+  R  +L + 
Sbjct: 127 QFAIDGLLPDLTIYLDVESEVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRLY 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           +  PDR  ++D+      V   +   +
Sbjct: 183 QAHPDRIKLIDAGQPLDQVIAAVAQTI 209


>gi|304390265|ref|ZP_07372219.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315657530|ref|ZP_07910412.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|304326747|gb|EFL93991.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315492002|gb|EFU81611.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 239

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 6/201 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEG +G GKTT I+    +++ + +DV  TREPGGT    A R +LL  G  +  
Sbjct: 31  GLFVAFEGCDGVGKTTQITRAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DVS 88

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++FAA R  HV  +I PA+ +GK+++ DR+L SS AYQG         +  L   
Sbjct: 89  PRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSLW 148

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++P+ T++LDL  ++  +R     SL      D  ER  +   ++ R+ FL ++  
Sbjct: 149 ATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSEG 205

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
           Q D   +VD++     +AT +
Sbjct: 206 Q-DTWLVVDASLPVAEIATQV 225


>gi|264677746|ref|YP_003277652.1| thymidylate kinase [Comamonas testosteroni CNB-2]
 gi|262208258|gb|ACY32356.1| thymidylate kinase [Comamonas testosteroni CNB-2]
          Length = 229

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 33/226 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ GLFISFEGI+GAGK++HI  L +  + +   V +TREPGGTP AE  R ++L   +D
Sbjct: 5   LSKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLHDAMD 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++  AAR DH+  VI PAL  G++++ DRF D+++AYQG           SL
Sbjct: 65  PL---TEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGF------SL 115

Query: 121 QEISVQEVM------------------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +++S  E M                  PD T+  DLP ++  +R      L  +   D F
Sbjct: 116 EQLSALERMAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAER------LATARVPDRF 169

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           E +      +  Q + + AR  P R   +D+  S  +V   I   V
Sbjct: 170 EAQPGEFFARVAQGYAERARTAPQRFVRIDAHASRHAVWQQITQAV 215


>gi|118475802|ref|YP_892953.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam]
 gi|196047361|ref|ZP_03114574.1| thymidylate kinase [Bacillus cereus 03BB108]
 gi|225862082|ref|YP_002747460.1| thymidylate kinase [Bacillus cereus 03BB102]
 gi|229182425|ref|ZP_04309677.1| Thymidylate kinase [Bacillus cereus BGSC 6E1]
 gi|166221719|sp|A0R8A3|KTHY_BACAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808277|sp|C1ES32|KTHY_BACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118415027|gb|ABK83446.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam]
 gi|196021763|gb|EDX60457.1| thymidylate kinase [Bacillus cereus 03BB108]
 gi|225787947|gb|ACO28164.1| dTMP kinase [Bacillus cereus 03BB102]
 gi|228601005|gb|EEK58573.1| Thymidylate kinase [Bacillus cereus BGSC 6E1]
          Length = 208

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNDDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    +D+  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|239637468|ref|ZP_04678442.1| thymidylate kinase [Staphylococcus warneri L37603]
 gi|239596913|gb|EEQ79436.1| thymidylate kinase [Staphylococcus warneri L37603]
          Length = 203

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 113/195 (57%), Gaps = 8/195 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT +  +   L  ++YDV  TREPGG P  E  R V+L    ++    
Sbjct: 4   FITFEGPEGSGKTTVLKAVAEKLA-QHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   +I+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVMPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+ +  + R+   LD   ++D+  HEK  + +  +  N+P
Sbjct: 121 NGLYPDLTIYLDVSAEVGRERILS--NQRDQNRLD---QEDIDFHEKVIEGYHRVIHNEP 175

Query: 186 DRCHIVDSAHSFQSV 200
           +R   +D+  S   V
Sbjct: 176 ERFVQIDADQSIDKV 190


>gi|241889540|ref|ZP_04776839.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
 gi|241863847|gb|EER68230.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
          Length = 208

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 119/209 (56%), Gaps = 15/209 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG +G+GKT+ I+    +L+ K Y V  TREPGGT  +E  R +L     D   
Sbjct: 3   GKFITVEGSDGSGKTSFINFATEYLKEKGYKVITTREPGGTEFSEKVRELLFDSSND-ID 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121
           A+ E+++F A+R DH+   I P + +G I++CDRF+DSS AYQ  G   S Q +   ++ 
Sbjct: 62  AKTESLLFCASRRDHIVKKILPHVNDGYIVICDRFVDSSVAYQSYGRGLSKQDIL--NIN 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179
             +   + PD T+   + V++GL R +NR   +  +   LD++  K+V      ++ + D
Sbjct: 120 SYATDNLEPDLTLYFCVDVEVGLARTKNRDDNNRMDQESLDFY--KNV------KRGYDD 171

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++R   +R  ++D++ ++++V    L I+
Sbjct: 172 LSRENTERIKVIDASDTYENVQKKALAIL 200


>gi|225026353|ref|ZP_03715545.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353]
 gi|224956363|gb|EEG37572.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353]
          Length = 209

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 115/215 (53%), Gaps = 13/215 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI  EG +G+GKTT I+LLK +L+   Y+  +TREPGGT   E  R ++L+    E  
Sbjct: 3   GLFIVMEGPDGSGKTTQINLLKEYLEEAGYECLITREPGGTVIGEEIRQLILNPEHKEMS 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AA+R   V  VI PAL EGKI++ DRF+DSS  YQG    ++ L + ++  +
Sbjct: 63  PVTEMLLYAASRAQLVHEVIGPALEEGKIVISDRFVDSSIVYQG---IARKLGISTVSAV 119

Query: 124 SVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +    PD    +DL    GL+R       +E   LD  E++ +  H    + +  +
Sbjct: 120 NAPGIGIYRPDGIFFIDLSEAEGLRRK------KEQKNLDRMEQEGIDFHHMVSEGYRKV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +P+   I D   S  ++   I N V EL++K+
Sbjct: 174 LSGRPEVMKI-DGGRSIDTIQKKIRNHVDELLKKK 207


>gi|89901037|ref|YP_523508.1| thymidylate kinase [Rhodoferax ferrireducens T118]
 gi|122479112|sp|Q21W76|KTHY_RHOFD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|89345774|gb|ABD69977.1| thymidylate kinase [Rhodoferax ferrireducens T118]
          Length = 215

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+FISFEGI+GAGK+THI  L +  + +   V +TREPGGTP AE  R ++L+  +D 
Sbjct: 3   TEGIFISFEGIDGAGKSTHIDALAQAFRAQGRAVTLTREPGGTPLAEKLRVLVLNDAMD- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++  AAR DH++ +I PAL  G ++LCDRF D+++AYQG         L  L+
Sbjct: 62  --AMTEALLVFAARRDHLQQLIEPALARGDVVLCDRFTDATFAYQGAGRGFDLKILSFLE 119

Query: 122 EI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               S+Q + PD     DL V   L        L  +   D FE + V    +    +L+
Sbjct: 120 RTVQSIQGLEPDFIRNPDLTVWFDLAAAIAAQRLAGARSPDKFEAQPVEFFRRVSDGYLN 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
                P R   +++  + ++V  ++L+ V
Sbjct: 180 RMTACPSRFARIEANQTREAVWQDVLHAV 208


>gi|241764588|ref|ZP_04762604.1| dTMP kinase [Acidovorax delafieldii 2AN]
 gi|241365951|gb|EER60577.1| dTMP kinase [Acidovorax delafieldii 2AN]
          Length = 225

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 106/200 (53%), Gaps = 19/200 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEGI+GAGK++HI  L    + +   V VTREPGGTP AE  R ++L+   D   
Sbjct: 5   GLFITFEGIDGAGKSSHIEGLAEAFRAQGRTVTVTREPGGTPLAEKLRAMVLN---DPMD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E+++  AAR DH+  VI PAL  G ++LCDRF D+++AYQG         L  L E+
Sbjct: 62  ALTESLLIFAARRDHLCQVIEPALARGDVVLCDRFTDATFAYQGAGRGFDLEVLSKL-EL 120

Query: 124 SVQEVM---------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            VQ  +         PD T+  DL  +I  +R+        +   D FE + V    +  
Sbjct: 121 MVQTGLAQEPGFMRNPDLTVWFDLAPEIAAQRLAG------ARVPDRFEAQPVEFFRRVA 174

Query: 175 QIFLDIARNQPDRCHIVDSA 194
           Q + D A   P R   +D+A
Sbjct: 175 QGYADRAATAPQRFARLDAA 194


>gi|298345977|ref|YP_003718664.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
 gi|298236038|gb|ADI67170.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
          Length = 239

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 6/201 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEG +G GKTT I+    +++ + +DV  TREPGGT    A R +LL  G  +  
Sbjct: 31  GLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DVS 88

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++FAA R  HV  +I PA+ +GK+++ DR+L SS AYQG         +  L   
Sbjct: 89  PRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSLW 148

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++P+ T++LDL  ++  +R     SL      D  ER  +   ++ R+ FL ++  
Sbjct: 149 ATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSEG 205

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
           Q D   +VD++     +AT +
Sbjct: 206 Q-DTWLVVDASLPVAEIATQV 225


>gi|306834090|ref|ZP_07467210.1| thymidylate kinase [Streptococcus bovis ATCC 700338]
 gi|304423663|gb|EFM26809.1| thymidylate kinase [Streptococcus bovis ATCC 700338]
          Length = 211

 Score =  119 bits (298), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 113/214 (52%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIITTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDNKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIIRRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +     PD T+  D+  +IGL R+  + + RE   LD  E+ D  +H++ R+ +L +
Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVREGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              Q  R   +D++     V +  L+ + E + K
Sbjct: 177 T-EQEKRIVTIDASRELAEVVSETLHTILEQLAK 209


>gi|300311913|ref|YP_003776005.1| thymidylate kinase [Herbaspirillum seropedicae SmR1]
 gi|300074698|gb|ADJ64097.1| thymidylate kinase protein [Herbaspirillum seropedicae SmR1]
          Length = 202

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 9/208 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG FI+FEGI+GAGK+THI  + + L+ +   V  TREPGGT   E  R ++L     
Sbjct: 1   MASGKFITFEGIDGAGKSTHIPFVTQLLRDRGLTVVATREPGGTELGERLRELVLH---H 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  A+R +H+  VI PAL  G  ++ DRF D+++AYQG         LD L
Sbjct: 58  KMHLETEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQGGGRKLALDKLDRL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++ D+P+++       R  L     LD FE++        R  +L  
Sbjct: 118 EQWVHPHLQPDLTLLFDVPLEVA------RARLDAERTLDKFEQEKADFFANTRAEYLRR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R  ++DS      +  ++  IV
Sbjct: 172 AAQFPHRFRLIDSTRPIAVIQEDLRAIV 199


>gi|318060890|ref|ZP_07979611.1| thymidylate kinase [Streptomyces sp. SA3_actG]
          Length = 1199

 Score =  119 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 527 TGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 586

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G I++ DR++DSS AYQG       + +  +  
Sbjct: 587 SHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARISR 646

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 647 WATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 698

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P+R  +VD A   +SV   +
Sbjct: 699 AAPERYLVVDGAQEPESVTRTV 720


>gi|327438112|dbj|BAK14477.1| thymidylate kinase [Solibacillus silvestris StLB046]
          Length = 209

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 10/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI+FEG EGAGKT+ +  +   L+ +  +  +TREPGG   AE  R ++L     
Sbjct: 1   MQRNLFITFEGGEGAGKTSVLKAIGERLKEERIEALLTREPGGIEIAEKIRTIILDPAHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
           E     EA+++AAAR  H    I PAL EGK +LCDRF+DSS AYQG    ++ + +D  
Sbjct: 61  EMHERTEALLYAAARAQHFYEKIVPALEEGKHVLCDRFIDSSLAYQG---YAREIGVDDV 117

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            S+ E ++ + +PD TI  ++  + GL R+   ++ R S  ++  + + +  H+K  + +
Sbjct: 118 LSINEFAIGKRLPDVTIFFNIAPERGLARI---HATR-SDEINRLDAEGLAFHQKVYEGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  R  P+R  +V++  + + V   +  I+  L+
Sbjct: 174 EEAIRRYPERFKMVNADQALEQVIEEVWGILNPLL 208


>gi|187478259|ref|YP_786283.1| thymidylate kinase [Bordetella avium 197N]
 gi|115422845|emb|CAJ49373.1| thymidylate kinase [Bordetella avium 197N]
          Length = 214

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 9/197 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+TH + L   LQ + +DV  TREPGGTP  E  R +LL+    + G
Sbjct: 12  GRFITLEGVDGAGKSTHTTWLVDTLQERGFDVVSTREPGGTPLGERLRELLLT---QDMG 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR +H+++VI PAL  G  ++CDR+ D++YAYQG         +  L++ 
Sbjct: 69  LDTETLLMFAARSEHLQHVIVPALARGAWVVCDRYTDATYAYQGGGRGLGAARVALLEQW 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD T + D+P+ +   R+           LD FE++     E+ R  +   A  
Sbjct: 129 LQPPLRPDLTWLFDVPLAVARARMAGERQ------LDRFEQEAEAFFERTRTAYHARAAA 182

Query: 184 QPDRCHIVDSAHSFQSV 200
           +P R HI+D++     V
Sbjct: 183 EPGRMHIIDASRPLDEV 199


>gi|163795500|ref|ZP_02189466.1| Thymidylate kinase [alpha proteobacterium BAL199]
 gi|159179099|gb|EDP63632.1| Thymidylate kinase [alpha proteobacterium BAL199]
          Length = 178

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/159 (42%), Positives = 94/159 (59%), Gaps = 6/159 (3%)

Query: 37  VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           +TREPGG+P AEA R +L++     + A  EA++  AAR DH+   IRPAL +G+ ++CD
Sbjct: 2   LTREPGGSPGAEAIRTLLVTGEPGRWDAVTEAMLMNAARRDHLIRTIRPALAKGQWVICD 61

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           RF+DS+ AYQG         L++L E +V++  PD T++LDL  + GL R     +LR S
Sbjct: 62  RFIDSTLAYQGYAGGVPLATLEALIEAAVEDTRPDLTLVLDLAPETGLAR-----TLRGS 116

Query: 157 ACLDY-FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
              +  FERK +  H   R  FL IA    DRC  VD+ 
Sbjct: 117 DGTEARFERKGLAFHAAVRDGFLRIATANLDRCVTVDAG 155


>gi|113475256|ref|YP_721317.1| thymidylate kinase [Trichodesmium erythraeum IMS101]
 gi|123352459|sp|Q115I0|KTHY_TRIEI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110166304|gb|ABG50844.1| thymidylate kinase [Trichodesmium erythraeum IMS101]
          Length = 225

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 21/195 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-------------NYDVHVTREPGGTPAAEAA 50
           G FI FEG+EG GKTT I LL+ +L                + +V +TREPGGT   +A 
Sbjct: 3   GKFIVFEGVEGGGKTTQIELLQDWLLETGESRQILPKSIDLDLEVVITREPGGTKLGKAL 62

Query: 51  RHVLLSCGV--DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
           R +LLS  V  ++    +E +++AA R  H+E +I+P L  G I+LCDRF+DS+ AYQG 
Sbjct: 63  RELLLSPDVLAEKIQETSELLLYAADRAQHIEALIKPCLERGTIVLCDRFIDSTIAYQGY 122

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
                   +  L  I+   +  D T  LD+ V+IGL R ++R         D  E+ ++ 
Sbjct: 123 GRGLDVELIKQLNYIATGGLKSDLTFWLDIDVEIGLARAKSR------GNFDRMEQANIE 176

Query: 169 IHEKRRQIFLDIARN 183
            H + +Q + ++A+N
Sbjct: 177 FHRRVQQGYQELAKN 191


>gi|15672380|ref|NP_266554.1| thymidylate kinase [Lactococcus lactis subsp. lactis Il1403]
 gi|14285511|sp|Q9CIG4|KTHY_LACLA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12723271|gb|AAK04496.1|AE006276_11 thymidylate kinase [Lactococcus lactis subsp. lactis Il1403]
 gi|326405974|gb|ADZ63045.1| thymidylate kinase [Lactococcus lactis subsp. lactis CV56]
          Length = 211

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   ++  TREPGG   AE  R ++L     + 
Sbjct: 2   NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTDI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++FAAAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +   + PD T+  D+  D+ L+R+ +NR    E   LD  ER +  +H K R+ +L+I 
Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P+R   +D++   + V  + L+++
Sbjct: 177 VKEPERFVKIDASQPLEKVVADTLSVL 203


>gi|39938716|ref|NP_950482.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|59798379|sp|Q7WSH2|KTHY_ONYPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33563105|dbj|BAC81721.1| thymidylate kinase [Onion yellows phytoplasma]
 gi|39721825|dbj|BAD04315.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 207

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 119/205 (58%), Gaps = 11/205 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKTTH   L   L +K Y   +T+EPGG    E  R++LL     +   
Sbjct: 1   MFISFEGCEGTGKTTHSRYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSSNKQIDF 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA R +H+  +I PAL + KI++CDR+LDS+ AYQ         F+ ++   +
Sbjct: 60  HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSQDFVLNINNFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA-RN 183
           +  + P+ T  LDL   IG++RV+ ++  +E   ++ F+ + +  H+K R+ +LD+  ++
Sbjct: 120 LNYI-PNITFYLDLDPKIGIQRVK-QFRPKE---INSFDLQKLSFHKKVRKGYLDLCQKD 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           Q  R  ++D++   +    NI NI+
Sbjct: 175 QQKRIFLIDASKPLE----NIYNII 195


>gi|309801867|ref|ZP_07695984.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022]
 gi|308221519|gb|EFO77814.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022]
          Length = 246

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 33/223 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57
           G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL        
Sbjct: 6   GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 65

Query: 58  GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           GV    A+              EA++FAA R  HV  VIRPAL  G +++ DR+LDSS A
Sbjct: 66  GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 125

Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           YQ      + L L  ++++S+     ++P+ T +LD+       R+++     ESA  D+
Sbjct: 126 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 182

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
             R         R  FL++AR++P+R  ++D++ S + V   I
Sbjct: 183 QNRT--------RNAFLELARDEPERFRVIDASQSIEEVWQRI 217


>gi|289551719|ref|YP_003472623.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01]
 gi|315660351|ref|ZP_07913204.1| thymidylate kinase [Staphylococcus lugdunensis M23590]
 gi|289181250|gb|ADC88495.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01]
 gi|315494640|gb|EFU82982.1| thymidylate kinase [Staphylococcus lugdunensis M23590]
          Length = 205

 Score =  119 bits (297), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I  +   L  +++DV  TREPGG P  E  R V+L    +     
Sbjct: 4   FITFEGPEGSGKTTVIQAVAEKLA-QDFDVISTREPGGVPTGEEIRKVVLDG--NHMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         +  L + ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALKQHKIVLCDRYIDSSLAYQGYARGIGIEEVRKLNDFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  +IG +R+ N  + RE   LD   ++D+  H    + +  I  N  
Sbjct: 121 NGLYPDLTIYLDISAEIGRQRIMN--NQREQNRLD---KEDLKFHNLVIEGYRQIMENGD 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   VD++ +  +V      I+   ++K
Sbjct: 176 KRFRKVDASQNIANVIEETYQIIINFLKK 204


>gi|307298997|ref|ZP_07578799.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915422|gb|EFN45807.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 209

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 7/211 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FIS EGI+G GKTT I LL  +L + + +  + REPGGT A E  R +LL      F +
Sbjct: 1   MFISVEGIDGCGKTTQIKLLAEYLSQLDVEFIIVREPGGTKAGEEIRDILLHKEYHLF-S 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E+E ++F AAR   V  VIRP L +GK ++ DRF+DSS AYQG         + ++   +
Sbjct: 60  ESELLLFMAARAQIVREVIRPELEKGKTVIADRFMDSSVAYQGVGRRLGREIVQAMNAFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           V   +PD T  +D+P D+ + R      +R+    D  E ++    E+ R+ +  +    
Sbjct: 120 VGGTVPDITFYIDVPTDVAISR------MRKEKKNDKIEMENFDFFERVREGYEKLMVEN 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +R   +D   S + V T+I   +  L  K+
Sbjct: 174 RERFVRIDGKQSEEKVQTDIRKSLRVLFHKK 204


>gi|296135948|ref|YP_003643190.1| thymidylate kinase [Thiomonas intermedia K12]
 gi|295796070|gb|ADG30860.1| thymidylate kinase [Thiomonas intermedia K12]
          Length = 215

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 9/211 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+S EGI+GAGK+T +  +   L+  N  V +TREPGGT   E  R +LL        
Sbjct: 10  GLFVSLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLH---QTMR 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++  AAR +HV  VI PAL+ G  ++CDRF  ++ AYQG         L++L   
Sbjct: 67  PATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALARW 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PDC I++D+P ++  +R      L ++   D FE++ V    + R  +L  A +
Sbjct: 127 VHPGLCPDCIILIDVPPEVAAQR------LAQTRQRDRFEQESVDFFARVRANYLQQAAS 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P++  ++D   + ++V   I + + +++Q+
Sbjct: 181 APEKWRVIDGTQTPEAVQKTITDYLKKVLQE 211


>gi|302520927|ref|ZP_07273269.1| thymidylate kinase [Streptomyces sp. SPB78]
 gi|302429822|gb|EFL01638.1| thymidylate kinase [Streptomyces sp. SPB78]
          Length = 1202

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 526 TGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 585

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G I++ DR++DSS AYQG       + +  +  
Sbjct: 586 SHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARISR 645

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 646 WATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 697

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P+R  +VD A   +SV   +
Sbjct: 698 AAPERYLVVDGAQEPESVTRTV 719


>gi|294813363|ref|ZP_06772006.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
 gi|326441702|ref|ZP_08216436.1| thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
 gi|294325962|gb|EFG07605.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
          Length = 1131

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 535 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 594

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV +V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 595 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 654

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 655 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 706

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    ++V T
Sbjct: 707 GDPARYLVVDAGQEPEAVTT 726


>gi|239929816|ref|ZP_04686769.1| integral membrane protein with kinase activity [Streptomyces
           ghanaensis ATCC 14672]
 gi|291438148|ref|ZP_06577538.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672]
 gi|291341043|gb|EFE67999.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672]
          Length = 966

 Score =  118 bits (296), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 507 SGFFIALEGGDGAGKSTQAEALAEWIRSKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 566

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +H++ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 567 SHRAEALLYAADRAEHIDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARINR 626

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 627 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 678

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P R  +VD+    ++V T I
Sbjct: 679 ADPGRYLVVDAGQEPEAVTTVI 700


>gi|145638629|ref|ZP_01794238.1| thymidylate kinase [Haemophilus influenzae PittII]
 gi|145272224|gb|EDK12132.1| thymidylate kinase [Haemophilus influenzae PittII]
 gi|309750128|gb|ADO80112.1| Thymidylate kinase [Haemophilus influenzae R2866]
          Length = 219

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 12  GKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKYETEEPV 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 72  TAKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + +
Sbjct: 132 TVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 185

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210


>gi|306823747|ref|ZP_07457121.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679]
 gi|304552745|gb|EFM40658.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679]
          Length = 245

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 33/223 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57
           G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL        
Sbjct: 5   GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 64

Query: 58  GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           GV    A+              EA++FAA R  HV  VIRPAL  G +++ DR+LDSS A
Sbjct: 65  GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 124

Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           YQ      + L L  ++++S+     ++P+ T +LD+       R+++     ESA  D+
Sbjct: 125 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 181

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
             R         R  FL++AR++P+R  ++D++ S + V   I
Sbjct: 182 QNRT--------RNAFLELARDEPERFRVIDASQSIEEVWQRI 216


>gi|119503325|ref|ZP_01625409.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080]
 gi|119460971|gb|EAW42062.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080]
          Length = 215

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 6/212 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG EG GKTT + L++  L+     + VTREPGGT   E  R +LL          
Sbjct: 10  FITVEGGEGVGKTTQLRLIEARLREAGIPLLVTREPGGTELGEQLRQLLLQKEGLAPTPM 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR  HV+ VI PAL  G+ +LCDRF D+S+AYQG         +  L E++ 
Sbjct: 70  AELLMVFAARAQHVDTVIAPALQRGEWVLCDRFTDASFAYQGFGRGLPLGAIQQLAELAH 129

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P+ +I+LD+  ++GL+R + R        LD FE + +   E  R  +L   + +P
Sbjct: 130 PHINPNLSILLDVDPEVGLERARARGE------LDRFELETIPFFEAVRNGYLQRVKLEP 183

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            R  ++D+  + + V   + + + E +   +S
Sbjct: 184 HRWRVIDAGVALEQVEQQLGDCLKEWIADAIS 215


>gi|293374639|ref|ZP_06620954.1| dTMP kinase [Turicibacter sanguinis PC909]
 gi|292646729|gb|EFF64724.1| dTMP kinase [Turicibacter sanguinis PC909]
          Length = 222

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG FI+ EG EGAGKTT  + L + L     +   TREPGG   AE  R V+L     
Sbjct: 13  MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  +  EA+++AAAR  H+   ++PA+  GKI+LCDRF+DSS  YQG    ++ + +D +
Sbjct: 73  EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQG---YARGIGMDEV 129

Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +EI   +++  MPD TI  D+  + GL R+    S RE   LD    + +  H+   + +
Sbjct: 130 REINQFAIEGFMPDMTIFFDIKPEDGLARIAAN-SGREVNRLDL---EGLEFHQLVYEGY 185

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              A    +R   VD+  S Q+V   I  ++ E + K
Sbjct: 186 KIQANLFSERIVTVDATQSIQAVTNEICQLILEKLGK 222


>gi|15835078|ref|NP_296837.1| thymidylate kinase [Chlamydia muridarum Nigg]
 gi|270285245|ref|ZP_06194639.1| thymidylate kinase [Chlamydia muridarum Nigg]
 gi|270289264|ref|ZP_06195566.1| thymidylate kinase [Chlamydia muridarum Weiss]
 gi|301336641|ref|ZP_07224843.1| thymidylate kinase [Chlamydia muridarum MopnTet14]
 gi|13629246|sp|Q9PKK5|KTHY_CHLMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|7190503|gb|AAF39311.1| thymidylate kinase [Chlamydia muridarum Nigg]
          Length = 203

 Score =  118 bits (296), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 101/191 (52%), Gaps = 9/191 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT     L + L  +  +V +TREPGG+   E  R ++L     E  +
Sbjct: 1   MFIVVEGGEGAGKTQFTQALSKRLMEEGKEVVLTREPGGSALGEQLRDLVLDV-TQEISS 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
            AE ++F AAR  H++  I PAL  GK ++CDRF DS+  YQG        F+  L  + 
Sbjct: 60  YAELLLFLAARAQHIQEKILPALESGKTVICDRFHDSTIVYQGIAGGLGEAFVTDLCYRV 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +  +PD T +LDLP   GL R   + +      LD FE+K    H   R+ F+ +A 
Sbjct: 120 VGDEPFLPDITFLLDLPEKEGLLRKTRQKN------LDRFEQKPTSFHRAAREGFISLAE 173

Query: 183 NQPDRCHIVDS 193
             PDR  I+D+
Sbjct: 174 RSPDRYKILDA 184


>gi|94310766|ref|YP_583976.1| thymidylate kinase [Cupriavidus metallidurans CH34]
 gi|254808302|sp|Q1LMB9|KTHY_RALME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|93354618|gb|ABF08707.1| thymidylate kinase (dTMP kinase) [Cupriavidus metallidurans CH34]
          Length = 200

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 110/208 (52%), Gaps = 16/208 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK+THI  +   L R   +V  TREPGGTP  E  R +LL     +  
Sbjct: 3   GKFITFEGIDGAGKSTHIEWVAERL-RARANVVTTREPGGTPLGEDLRQLLLH---RKMH 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120
            E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG     + L LD   +L
Sbjct: 59  LETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQG---GGRGLALDRLATL 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++ D+P++    R+      RE    D FE +     E+ R  +L  
Sbjct: 116 EQWVQSGLQPDLTLLFDVPLETASARLAG---AREP---DKFEAESRAFFERTRTEYLRR 169

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R  ++D+  S   +   +  I+
Sbjct: 170 AAEAPQRFRVIDATRSIDEIRVALEEII 197


>gi|24380041|ref|NP_721996.1| thymidylate kinase [Streptococcus mutans UA159]
 gi|290579980|ref|YP_003484372.1| putative thymidylate kinase [Streptococcus mutans NN2025]
 gi|46576564|sp|Q8DSU6|KTHY_STRMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|24378032|gb|AAN59302.1|AE014996_5 putative thymidylate kinase [Streptococcus mutans UA159]
 gi|254996879|dbj|BAH87480.1| putative thymidylate kinase [Streptococcus mutans NN2025]
          Length = 212

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G+FISFEG +GAGKTT + ++L +  +    +V  TREPGG   AE+ R ++L    
Sbjct: 1   MTKGIFISFEGPDGAGKTTVLEAILPQLKKLVAKEVITTREPGGVAIAESIRDLILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I P L +G ++L DRF+DSS AYQG         +  
Sbjct: 61  TNMDDKTELLLYIAARRQHLVERILPELKKGNLVLVDRFIDSSVAYQGYGRGLDADAVTW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + PD T+  D+   IGL R++     RE   LD  E+ D  +H + R  +L 
Sbjct: 121 LNNFATDGLQPDLTLYFDVDSQIGLTRIEKNKE-REVNRLD-LEQLD--MHRRVRSGYLK 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A+  PDR   +D+A   + V T+ L I+
Sbjct: 177 LAQENPDRIVTIDAARPLEEVITDALFII 205


>gi|152973878|ref|YP_001373395.1| thymidylate kinase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189028827|sp|A7GJU2|KTHY_BACCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|152022630|gb|ABS20400.1| dTMP kinase [Bacillus cytotoxicus NVH 391-98]
          Length = 208

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 10/208 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG EG+GK+T I+ L  + + K   V  TREPGG   +E  R +L         
Sbjct: 3   GLFVTIEGPEGSGKSTLITKLLPYFENKGQKVIATREPGGIAISEEIRTILHKKEYTTME 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AAAR  H+   + PAL   +++LCDRF+DSS AYQG    ++ L +D + E+
Sbjct: 63  ARTEALLYAAARRQHLVEKVMPALEADQLVLCDRFIDSSLAYQG---YARGLGIDKVYEM 119

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + ++ MP  TI LD+  ++GL R++ + + RE   LD    + +  H   R+ +L I
Sbjct: 120 NRFATEDCMPSLTIYLDIAPEVGLARIE-KDAAREVNRLDM---ESIAFHRLVREGYLQI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
                DR  +V++    ++V   ++ ++
Sbjct: 176 VERFKDRIVVVNADQPMENVVEEVIQLI 203


>gi|329769793|ref|ZP_08261194.1| thymidylate kinase [Gemella sanguinis M325]
 gi|328838155|gb|EGF87773.1| thymidylate kinase [Gemella sanguinis M325]
          Length = 208

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 118/206 (57%), Gaps = 9/206 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG +G+GKTT I+ L ++L+ K Y V  TREPGGT  +E  R +L      E  
Sbjct: 3   GKFITVEGSDGSGKTTFINFLTQYLKDKGYKVITTREPGGTEFSEKVRELLFDKTY-EID 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
           A+ E+++F  +R DH+   I P + +G I++CDRF+DSS AYQ   R  S+   +D + +
Sbjct: 62  AKTESLLFCVSRRDHIIKKIIPYVEDGYIVICDRFVDSSIAYQSYGRGLSKQDIID-INK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+   + V++GL R + R    E+  +D+   +D+  ++  +  + +++ 
Sbjct: 121 YATDGLEPDLTLYFKVDVEVGLSRTKGR---DENNRMDH---EDLSFYKSVKHGYDELSE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
              +R  +VD+   +++V  + L IV
Sbjct: 175 EYSNRIKVVDANQKYENVEKDALEIV 200


>gi|94987202|ref|YP_595135.1| thymidylate kinase [Lawsonia intracellularis PHE/MN1-00]
 gi|166221750|sp|Q1MQB3|KTHY_LAWIP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|94731451|emb|CAJ54814.1| Thymidylate kinase [Lawsonia intracellularis PHE/MN1-00]
          Length = 208

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63
           +FI+ EGIEG+GKTT I+ L  +   +  DV VTREPGG       R ++LS    E G 
Sbjct: 1   MFITIEGIEGSGKTTLINRLSEYFSSRGEDVIVTREPGGCELGGLLRSLVLS---SELGL 57

Query: 64  -AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE+E  +F A R  HV   I+PA+M GK + CDR+ DS+  YQG         L    E
Sbjct: 58  TAESELFLFLADRAQHVSECIQPAIMNGKTVFCDRYADSTIVYQGYGRGMNIGKLWEFNE 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ + P  T++LD+ V+  L+R   R  +L  +     FE + +  H + R  FL  A
Sbjct: 118 VAIKGIWPQKTLLLDIDVEKALERACIRNEALGLNIVEGRFESEPMDFHNRIRDGFLHWA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              PDR  I+++  + + +    ++++ E+V
Sbjct: 178 GRNPDRITILNADTTPEDLFQQSVSVLREIV 208


>gi|149926477|ref|ZP_01914738.1| Thymidylate kinase [Limnobacter sp. MED105]
 gi|149824840|gb|EDM84054.1| Thymidylate kinase [Limnobacter sp. MED105]
          Length = 229

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 8/202 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ISFEG++GAGK++HI+ +K  L+   ++   TREPGGTP  EA R ++L   +D   
Sbjct: 20  GYLISFEGVDGAGKSSHIARVKARLEELGFECLQTREPGGTPVGEAIRELVLHHDMD--- 76

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR  H+   I+PAL  G  ++ DRF DSS+AYQ     +       L + 
Sbjct: 77  VNTELLLMYAARRQHMVETIQPALDRGVWVITDRFEDSSFAYQAGAGGASWEDCQQLSKW 136

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +++   P  T + DLP+ I   R+Q R     +   D FE K     E  R  F+  ++ 
Sbjct: 137 ALKGFEPTLTFLFDLPIAISQSRIQGR-----AGASDKFEEKPTGYFEAVRAGFIKRSQL 191

Query: 184 QPDRCHIVDSAHSFQSVATNIL 205
            P R  ++D+  S   V   +L
Sbjct: 192 NPRRIRLIDAQPSESEVGETVL 213


>gi|194246765|ref|YP_002004404.1| Thymidylate kinase [Candidatus Phytoplasma mali]
 gi|193807122|emb|CAP18560.1| Thymidylate kinase [Candidatus Phytoplasma mali]
          Length = 208

 Score =  118 bits (295), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 120/214 (56%), Gaps = 7/214 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKT     L++ L  KNY   +T+EPGG    +  + +LL+    +   
Sbjct: 1   MFISFEGCEGTGKTVLSKKLEKKLIEKNYLTILTKEPGGCLQTQPIKKILLNSSFKKLHC 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
             E++++AA R++H+  +I P+L + KI++CDRFLDSS AYQG  R+  + L        
Sbjct: 61  YTESLLYAADRIEHLNRIIIPSLQQKKIVICDRFLDSSVAYQGYGRNLGEELIYKI--NF 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              + +PD T  +D+   IG++R++N    R+   LD F+ + +  HE+ R+ +L+I + 
Sbjct: 119 YALKYLPDITFYIDIDPFIGVQRIKN---FRKEK-LDNFDLEKMDFHERVREGYLNIFKK 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              R  ++D   S +++ T I   V + +  +V 
Sbjct: 175 NKSRIILIDGNQSLENIFTIIYQKVIKFLNIKVK 208


>gi|21674136|ref|NP_662201.1| thymidylate kinase [Chlorobium tepidum TLS]
 gi|25453084|sp|Q8KCU7|KTHY_CHLTE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21647295|gb|AAM72543.1| thymidylate kinase [Chlorobium tepidum TLS]
          Length = 214

 Score =  118 bits (295), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ISFEGI+GAGK+T +  LKR+LQ +  +V   REPGGTP AE  R +LL    D    
Sbjct: 1   MLISFEGIDGAGKSTQVMKLKRYLQERGREVLALREPGGTPVAEEIRELLLERRND-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122
             E ++FAA+R + V+ VI+PAL     ++ DRF DS+ AYQG     + L LD L E  
Sbjct: 60  VGELLLFAASRAELVQQVIQPALENDSDVILDRFFDSTTAYQG---YGRGLDLDMLAEIN 116

Query: 123 -ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFL 178
            I+   ++PD T  LDL  +  L R  +  SL    ES  LD  E   +  + + R+ + 
Sbjct: 117 RIASCRLVPDVTFYLDLTPEDALMRKFSEKSLPLAFESEELDRMENSGLDFYRRVREGYH 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            I    P+R  I+D+  S   +   I++ +  L  K
Sbjct: 177 KIGGENPNRIIIIDALLSPSEIHRKIISSIDALCTK 212


>gi|23097491|ref|NP_690957.1| thymidylate kinase [Oceanobacillus iheyensis HTE831]
 gi|46576586|sp|Q8EU53|KTHY_OCEIH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|22775714|dbj|BAC11992.1| thymidylate kinase [Oceanobacillus iheyensis HTE831]
          Length = 225

 Score =  118 bits (295), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 10/216 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+FEG EGAGKTT I  + + L  +  DV  TREPGG   +E  R ++      E 
Sbjct: 2   AGLFITFEGGEGAGKTTVIQHIFQKLIAQGIDVIQTREPGGIKISEKIRSIIHDPEHLEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   + PAL +GK++LCDRF+DSS AYQG    ++ L +D +  
Sbjct: 62  EERTEALLYAAARRQHLVEKVFPALEQGKVVLCDRFVDSSLAYQG---YARGLGIDEVYA 118

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I+   +Q+ MPD T+  D+    GL+R+    + RE   LD    +++  HE   + +  
Sbjct: 119 INHFVIQDCMPDLTLFFDIEPKKGLERIAANKN-RERNRLDL---ENMQFHEAVYEGYQK 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +    P+R   + +  + ++V  + + I+   + ++
Sbjct: 175 VIARFPERIKTIQAEQALEAVEQDTMEIISSFLNEK 210


>gi|332173841|gb|AEE23095.1| thymidylate kinase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 209

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 8/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G FI  EG+EGAGK+T +S++K  +++  + +  TREPGGT  AEA R  +     +
Sbjct: 2   IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHRLICTREPGGTAMAEAIRECVKKDWQN 61

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E    EAE ++  AAR   + NVI PAL  GK +L DR   SS AYQG         +  
Sbjct: 62  ETVTTEAELLLMYAARAQLLHNVIHPALSSGKWVLGDRHDMSSQAYQGGGREIPQTLIQP 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L++I+++  +PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R  +L 
Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSVGLQRARGRGE------LDRIEQLDISFFERTRARYLS 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A  Q D C ++++    +SV  +I
Sbjct: 176 LA-EQDDNCVVINTMQPIESVHHDI 199


>gi|289643672|ref|ZP_06475784.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
 gi|289506505|gb|EFD27492.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
          Length = 917

 Score =  118 bits (295), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 7/154 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLFI+ EG EG+GK+T +  L+ +L     +V VTREPGGT      R +LL      
Sbjct: 506 HAGLFIALEGGEGSGKSTQVERLRSWLASSGREVVVTREPGGTALGVKLRELLLDPAA-R 564

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R +HV  VI PAL  G I++ DRF+DSS AYQG   + + L  D + 
Sbjct: 565 LHPRTEALLYAADRAEHVSRVIEPALARGAIVVSDRFIDSSIAYQG---AGRQLGADDIA 621

Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            +S    + ++PD TI+LD+P   GL RV+ R S
Sbjct: 622 MLSRWATRSLLPDVTILLDIPARTGLARVRARAS 655


>gi|77360743|ref|YP_340318.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125]
 gi|123588315|sp|Q3IHC1|KTHY_PSEHT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|76875654|emb|CAI86875.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125]
          Length = 208

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG+EGAGK+T I+L + FL  K  D    REPGGTP AE+ R ++ +   +E   E
Sbjct: 5   FIVIEGLEGAGKSTAIALCQSFLNSKKIDFINVREPGGTPLAESLRTLVKAQHDEEIAFE 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR   + NVI PAL +G+ +L DR   SS AYQG         L SL  + +
Sbjct: 65  TELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSSMVL 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           + + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  +L++A N  
Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELA-NDD 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +    VD+  S + V  +I N++
Sbjct: 178 NSIKTVDANQSIEHVHRDITNVL 200


>gi|221068068|ref|ZP_03544173.1| dTMP kinase [Comamonas testosteroni KF-1]
 gi|220713091|gb|EED68459.1| dTMP kinase [Comamonas testosteroni KF-1]
          Length = 229

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 21/216 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  GLFISFEGI+GAGK++HI  L +  + +   V +TREPGGTP AE  R ++L   +D
Sbjct: 5   LPKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLHDAMD 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFL- 117
                 EA++  AAR DH+  VI PAL  G++++ DRF D+++AYQG     S + L + 
Sbjct: 65  PL---TEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSVL 121

Query: 118 -------DSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
                   +LQ  S  + M  PD T+  DLP ++  +R      L  +   D FE +   
Sbjct: 122 ERMAQTGTALQAESSPDFMREPDMTLWFDLPAEVAAER------LTTARVPDRFEAQPGE 175

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
              +  Q + + AR  P R   +D+  S  +V   I
Sbjct: 176 FFARVAQGYAERARTAPQRFVRIDAHASRHAVWQQI 211


>gi|242241567|ref|ZP_04796012.1| dTMP kinase [Staphylococcus epidermidis W23144]
 gi|242234948|gb|EES37259.1| dTMP kinase [Staphylococcus epidermidis W23144]
          Length = 203

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 12/197 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           FI+FEG EGAGKT   S++K   +R  K YD+  TREPGG   +E  R ++L    +   
Sbjct: 4   FITFEGPEGAGKT---SVIKEVSERLAKEYDIVTTREPGGVLTSEEIRRIVLDG--ESID 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA+R +H+   I P+L  GKI+LCDR++DSS AYQG         +  L E 
Sbjct: 59  IRTEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEF 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD TI LD+  +IG +R+     L+ +   +  +++D + HEK  + +  +  +
Sbjct: 119 AINGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISD 173

Query: 184 QPDRCHIVDSAHSFQSV 200
            P R   V++ HS   V
Sbjct: 174 NPHRFIKVNANHSLDKV 190


>gi|170726335|ref|YP_001760361.1| thymidylate kinase [Shewanella woodyi ATCC 51908]
 gi|169811682|gb|ACA86266.1| dTMP kinase [Shewanella woodyi ATCC 51908]
          Length = 210

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 10/205 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63
           FI  EG+EGAGK++ ISL++ F+++    V V TREPGGTP AE  R ++ ++   D   
Sbjct: 9   FIVIEGLEGAGKSSAISLVRDFIEKHTGAVPVCTREPGGTPLAERIRDLVKIADETDPLC 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++F AAR   V NVI+PAL  G+ +L DR   SS AYQG       L ++S+   
Sbjct: 69  DEAECLLFYAARAQLVANVIKPALRRGEWVLGDRHNLSSLAYQGGGRGLSTL-VESVSRA 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD TI LD+   +GL R  NR        LD  E +++   E+ R  FL  A+ 
Sbjct: 128 TLGDFKPDLTIYLDIEPKLGLTRAANRGE------LDRIEVEEIAFFERARHTFLSYAQ- 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           Q D   ++D+  +   V  +I+ ++
Sbjct: 181 QDDSIQVIDAGQTMAEVHKDIVALL 205


>gi|301169177|emb|CBW28774.1| thymidylate kinase [Haemophilus influenzae 10810]
          Length = 219

 Score =  118 bits (295), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 12  GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEPV 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 72  TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ +
Sbjct: 132 TVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEKMDLDFFHRTRASYLELVK 185

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210


>gi|308234128|ref|ZP_07664865.1| thymidylate kinase [Atopobium vaginae DSM 15829]
 gi|328943647|ref|ZP_08241112.1| thymidylate kinase [Atopobium vaginae DSM 15829]
 gi|327491616|gb|EGF23390.1| thymidylate kinase [Atopobium vaginae DSM 15829]
          Length = 211

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 9/203 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG++G GK+T + LL+   +  +Y V   REPGGT  +EA R ++L       
Sbjct: 4   SGLFITLEGVDGCGKSTQVQLLRSCFEEASYKVSCLREPGGTSISEAIRALVLDPAYTSM 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
            +E E +++ AAR   V  VI+PAL +G+I+LCDR+ DS+YAYQ G R  ++ + L +  
Sbjct: 64  SSECELLLYEAARAQLVHEVIKPALAQGRIVLCDRYFDSTYAYQYGGRKLAEDMVLRA-N 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++    ++P  T +LD+ V     R            +D  E++ +   +  ++ +  +A
Sbjct: 123 DLGSCGIVPHKTYVLDVDVACAYARATQ-------TSVDRLEQEGLAFQQDVQKAYKKLA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
             QP R  ++    + Q V + +
Sbjct: 176 CLQPQRVTLISGEGTPQEVFSRL 198


>gi|290475848|ref|YP_003468740.1| thymidylate kinase [Xenorhabdus bovienii SS-2004]
 gi|289175173|emb|CBJ81976.1| thymidylate kinase [Xenorhabdus bovienii SS-2004]
          Length = 213

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 120/218 (55%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT I ++++   Q    D+  TREPGGTP AE  R  L+  GV
Sbjct: 1   MNSK-FIVIEGLEGAGKTTAIRTVVETLKQYGISDLIFTREPGGTPLAEKLRQ-LIKQGV 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +      +AE ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         +
Sbjct: 59  EGESLTNKAEVLMLYAARVQLVENVIKPALEKGTWVVGDRHDLSSQAYQGGGRGIDQKLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL+E ++ +  PD TI LDLP ++GL+R       RE   LD  E++ +    + R+ +
Sbjct: 119 TSLRESALGDFYPDLTIYLDLPPEVGLQRA------RERGELDRIEKESLDFFHRTRERY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           L++   Q D    +D+    + V   I   + + ++++
Sbjct: 173 LELV-AQDDTIKKIDATQPLEKVQGAIRQTLLQWLKQQ 209


>gi|109898434|ref|YP_661689.1| thymidylate kinase [Pseudoalteromonas atlantica T6c]
 gi|109700715|gb|ABG40635.1| thymidylate kinase [Pseudoalteromonas atlantica T6c]
          Length = 209

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 112/205 (54%), Gaps = 8/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G FI  EG+EGAGK+T +S++K  +++  + +  TREPGGT  AEA R  +     +
Sbjct: 2   IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHSLTCTREPGGTAMAEAIRECVKKDWPN 61

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E    EAE ++  AAR   + NVI PAL  G  +L DR   SS AYQG         +  
Sbjct: 62  ETVTTEAELLLMYAARAQLLHNVIHPALTSGSWVLGDRHDMSSQAYQGGGREIPQTLIQP 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L++I+++  +PD T+ LD+   IGL R + R        LD  E+ D+   E+ R  +L 
Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSIGLARARGRGE------LDRIEQLDISFFERTRARYLS 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A  Q + C ++D+  S + V  +I
Sbjct: 176 LA-EQDENCVVIDTMQSIEQVHHDI 199


>gi|156743649|ref|YP_001433778.1| dTMP kinase [Roseiflexus castenholzii DSM 13941]
 gi|189030839|sp|A7NQB4|KTHY_ROSCS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|156234977|gb|ABU59760.1| dTMP kinase [Roseiflexus castenholzii DSM 13941]
          Length = 229

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 7/211 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG EG+GK+T   LL   L  + Y V +TREPGGT   +  R ++L     E   
Sbjct: 3   LFVTFEGPEGSGKSTQARLLYESLYARRYPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+AAR   V  VIRP L +G I+LCDR+ DS+YAYQG         L ++   +
Sbjct: 63  TTETLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTYAYQGYGLGRDLAELRTITAAA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYS---LRESACLDY----FERKDVMIHEKRRQIF 177
              + PD T  LD+  + GL+R + ++    L     +D      + +++  H++    +
Sbjct: 123 TGGLRPDITFYLDISAEDGLERKRRKHPGARLMGQRGVDQEWNRLDARELEYHQRVEAGY 182

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +    P+R  ++D+  S +++A  I  IV
Sbjct: 183 RALIAQDPERWRVLDARQSIEALAEQIAAIV 213


>gi|167624300|ref|YP_001674594.1| thymidylate kinase [Shewanella halifaxensis HAW-EB4]
 gi|167354322|gb|ABZ76935.1| dTMP kinase [Shewanella halifaxensis HAW-EB4]
          Length = 212

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 10/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59
           NS  FI  EG+EGAGK++ I+L++ F+++      V TREPGGTP AE  R ++ ++   
Sbjct: 7   NSAKFIVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKIANDS 66

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++F AAR   V NVI+PAL  G+ +L DR   SS AYQG       L + +
Sbjct: 67  DPLCDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRGLMPL-VSA 125

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +++   PD T+ LD+   +GL+R   R        LD  E++++   ++ R  FL 
Sbjct: 126 ISDATLKGFKPDLTLYLDIAPKLGLERAARRGE------LDRIEQQEIEFFDRARATFLS 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            A +  D   IVD++ S   V  +I+ I+ E
Sbjct: 180 FA-DSDDTIKIVDASQSMAQVHKDIIAILQE 209


>gi|282863636|ref|ZP_06272694.1| thymidylate kinase [Streptomyces sp. ACTE]
 gi|282561337|gb|EFB66881.1| thymidylate kinase [Streptomyces sp. ACTE]
          Length = 1023

 Score =  117 bits (294), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 506 TGFFLAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLSPTEIARISR 625

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 626 WATSGLVPHLTVLLDVDPETARERF--------TEAPDRLESEPPEFHNRVRSGFLTLAA 677

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+A   +++ T
Sbjct: 678 AAPLRYLVVDAAQEPEAITT 697


>gi|262283117|ref|ZP_06060884.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA]
 gi|262261369|gb|EEY80068.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA]
          Length = 212

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL +S EG +GAGK++ +  L   L+ K   V  TREPGG P +EA R V+L     
Sbjct: 1   MKRGLLVSLEGPDGAGKSSVLEALVPILEAKGQQVVTTREPGGVPISEAIREVILDQNNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         ++ L
Sbjct: 61  EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+    + RE   LD    + + +H++ RQ +L  
Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNKN-REVNRLDL---EGLEMHQRVRQGYLYS 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
               P+R   +D++ + + V  + L ++
Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVL 204


>gi|253576904|ref|ZP_04854229.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843771|gb|EES71794.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 216

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 10/204 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +G+GKTT +  ++R L+ +  +   TREPGG   AE  R V+L+       
Sbjct: 7   GLFITLEGGDGSGKTTVMREMERLLKEQGVNFISTREPGGIEIAEKIREVILNPQHTAMD 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AA+R  H+   + P+L  G  +LCDRFLDSS AYQG    ++ L +D + +I
Sbjct: 67  ARTEALLYAASRRQHLAEKVEPSLERGITVLCDRFLDSSLAYQG---YARGLGIDEVLKI 123

Query: 124 SV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++   +   PD T  LD+  ++GL R+      RE   LD    + +  H+K R+ +  +
Sbjct: 124 NLFATKGRFPDLTFYLDIEPEVGLARIAAGAG-REVNRLDM---ESLHFHQKVREGYQIL 179

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A   P+R   +D++ S + VA  I
Sbjct: 180 AGMYPERIKTIDASRSKEEVAAEI 203


>gi|145640425|ref|ZP_01796009.1| thymidylate kinase [Haemophilus influenzae R3021]
 gi|145275011|gb|EDK14873.1| thymidylate kinase [Haemophilus influenzae 22.4-21]
          Length = 210

 Score =  117 bits (294), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 63  TAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + +
Sbjct: 123 TVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 177 DNP-KAVVINAEQSIELVQADIESAV 201


>gi|297538533|ref|YP_003674302.1| thymidylate kinase [Methylotenera sp. 301]
 gi|297257880|gb|ADI29725.1| thymidylate kinase [Methylotenera sp. 301]
          Length = 212

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 5/217 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I  +G  GAGK+T +  ++  L+ K YD  +TREPGGT   E  R VLL     
Sbjct: 1   MNKGCMIVCDGGNGAGKSTVLRAIEEHLKTKQYDYVMTREPGGTVIGEKIREVLLCSDTP 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++FAAAR  HV   I P++  GK+++ DRF  ++Y++Q          +  L
Sbjct: 61  EMCDVTELMLFAAARAQHVREKIIPSINAGKVVVSDRFDSATYSFQHYGRGLSLALIQQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I++     D TI+LD+    GL+RV +R S      LD  E  ++    K R  +L+ 
Sbjct: 121 NNIALDGFKADVTIVLDIDPVKGLERVISRGS-----DLDRMEMANIEFLHKARNGYLEQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A+  P+R  ++D++ S   V ++ + +V  ++ +++ 
Sbjct: 176 AKADPERFAVIDASQSLDVVISDAVKVVERVIARKLG 212


>gi|171058561|ref|YP_001790910.1| dTMP kinase [Leptothrix cholodnii SP-6]
 gi|170776006|gb|ACB34145.1| dTMP kinase [Leptothrix cholodnii SP-6]
          Length = 226

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 9/206 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EGI+GAGKT+H+  +    + +  +V  TREPGGTP AEA R ++L   +D  
Sbjct: 25  AGCFVTIEGIDGAGKTSHVQAIAERWRARGLEVVRTREPGGTPLAEALRELVLHQPMD-- 82

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++  AAR +H++ VI PAL  G ++LCDRF D+++AYQG         L  L+ 
Sbjct: 83  -ALTEALLVFAARRNHLQEVIEPALARGAVVLCDRFTDATFAYQGGGRGFDTAVLAQLET 141

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD T+  DL  ++             +   D FER+ V      R  + D   
Sbjct: 142 WVQGSRQPDLTLWFDLGPEL------AAERRAAARAPDRFEREQVAFFHAVRLAYADRLA 195

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R   +D+  + + VA   L ++
Sbjct: 196 QAPQRVQRIDAGGTPEQVAARWLAVL 221


>gi|30995377|ref|NP_438617.2| thymidylate kinase [Haemophilus influenzae Rd KW20]
 gi|260580481|ref|ZP_05848309.1| thymidylate kinase [Haemophilus influenzae RdAW]
 gi|260092823|gb|EEW76758.1| thymidylate kinase [Haemophilus influenzae RdAW]
          Length = 219

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 12  GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 72  TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ +
Sbjct: 132 TVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELVK 185

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210


>gi|319762329|ref|YP_004126266.1| thymidylate kinase [Alicycliphilus denitrificans BC]
 gi|317116890|gb|ADU99378.1| thymidylate kinase [Alicycliphilus denitrificans BC]
          Length = 218

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 17/208 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+FEGI+GAGK++HI  L R L+     V +TREPGGTP AE  R +LL+  +D
Sbjct: 1   MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLNDAMD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E ++  AAR DH+  VI PAL  G+ +LCDRF D+++AYQG         L  +
Sbjct: 61  ---ALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117

Query: 121 QEISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + ++   +         PD T+  D+P ++          L  +   D FE + V    +
Sbjct: 118 ERLAQTGIGLGPDLMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200
             + + D A   P R   +D A   + V
Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199


>gi|330825750|ref|YP_004389053.1| Thymidylate kinase [Alicycliphilus denitrificans K601]
 gi|329311122|gb|AEB85537.1| Thymidylate kinase [Alicycliphilus denitrificans K601]
          Length = 218

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 17/208 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+FEGI+GAGK++HI  L R L+     V +TREPGGTP AE  R +LL+  +D
Sbjct: 1   MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLNDAMD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E ++  AAR DH+  VI PAL  G+ +LCDRF D+++AYQG         L  +
Sbjct: 61  ---ALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117

Query: 121 QEISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + ++   +         PD T+  D+P ++          L  +   D FE + V    +
Sbjct: 118 ERLAQTGIGLGPDSMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200
             + + D A   P R   +D A   + V
Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199


>gi|330877896|gb|EGH12045.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 172

 Score =  117 bits (294), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 6/176 (3%)

Query: 40  EPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99
           EPGGTP AE  R +LL+   +   A+ E ++  AAR  H+  VIRPAL  G+++LCDRF 
Sbjct: 1   EPGGTPLAERIRELLLAPSDEAMSADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFT 60

Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           D++YAYQG         +  L+E    ++ PD T++ DLPV+IGL R   R        L
Sbjct: 61  DATYAYQGGGRGLSQQRIAVLEEFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 114

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           D FE++     +  R  +L  A+  P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 115 DRFEQEGRAFFDAVRSTYLQRAKADPARYRLVDAAQPLADVQASLDTLLPQLLELR 170


>gi|325576842|ref|ZP_08147457.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392]
 gi|325161048|gb|EGC73166.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392]
          Length = 210

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 114/217 (52%), Gaps = 14/217 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T +  +   L+     D+  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL EGKI+L DR   SS AYQG         + +L+ 
Sbjct: 63  TDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLKN 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
           + + +  PD  + LD+    GL R + R  L   E   LD+F R         RQ +L++
Sbjct: 123 MVLGDFEPDFVLYLDIDPAEGLARARGRGELDRIEQQGLDFFHRT--------RQRYLEL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKR 215
            +N P +  I+++      V  +I + V  W + Q R
Sbjct: 175 VQNNP-KAAIINAGQPLAQVQADIQSAVKNWWVSQTR 210


>gi|256786952|ref|ZP_05525383.1| integral membrane protein with kinase activity [Streptomyces
           lividans TK24]
          Length = 1063

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 464 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 523

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 524 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 583

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 584 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 635

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    ++V T
Sbjct: 636 ADPGRYLVVDAGQEPEAVTT 655


>gi|1730073|sp|P44719|KTHY_HAEIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1573430|gb|AAC22114.1| thymidylate kinase [Haemophilus influenzae Rd KW20]
          Length = 210

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 8/207 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 122 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++ P +  ++++  S + V  +I + V
Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAV 201


>gi|1074411|pir||A64153 dTMP kinase (EC 2.7.4.9) - Haemophilus influenzae (strain Rd KW20)
          Length = 237

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 29  KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 88

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 89  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 148

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 149 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 202

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++ P +  ++++  S + V  +I
Sbjct: 203 KDNP-KAVVINAEQSIELVQADI 224


>gi|47570434|ref|ZP_00241070.1| thymidylate kinase [Bacillus cereus G9241]
 gi|47552892|gb|EAL11307.1| thymidylate kinase [Bacillus cereus G9241]
          Length = 208

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLIEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP  TI LD+  ++GL R+      RE   LD    + +  H++ R+ +L 
Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EGISFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203


>gi|82701134|ref|YP_418234.1| putative thymidylate kinase [Pseudomonas phage EL]
 gi|82658039|emb|CAG27295.1| putative thymidylate kinase [Pseudomonas phage EL]
          Length = 215

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 13/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           + SG+F   EG++G GKTT ++ +  +L  +  DV  TREPGGTP     R +LLS  +D
Sbjct: 6   LYSGMFCVVEGLDGTGKTTVVNRITDWLVERGVDVVKTREPGGTPYCNRIRDLLLS--LD 63

Query: 61  EFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E G       E ++F AAR+ H+E +++P+L  GK +LCDR++ ++ AYQGE        
Sbjct: 64  EGGEGPCQMTELLLFNAARVQHLETLVKPSLQAGKFVLCDRYVHTTIAYQGEARGLGVGK 123

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L  +  Q+  P  T ILD PV++ L RV  R        ++  + + V  +EK R  
Sbjct: 124 ILELHRLLTQDFWPHFTFILDAPVEVVLDRVHQR------GGMNRLDSQTVEFYEKARTA 177

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  + +   D C ++D+  S   V   +   +  L  K
Sbjct: 178 YRRMGQTGRD-CALIDATVSEDEVFNQMTTYLERLCNK 214


>gi|302341674|ref|YP_003806203.1| thymidylate kinase [Desulfarculus baarsii DSM 2075]
 gi|301638287|gb|ADK83609.1| thymidylate kinase [Desulfarculus baarsii DSM 2075]
          Length = 226

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 1/209 (0%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG EG GK+T  S+L R ++     V +TREPGG    +  R +LL  G +     
Sbjct: 13  FITLEGGEGCGKSTQASMLGRRIRGLGLKVVLTREPGGASLGQTIRELLLGPGQEPVDPV 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++F A R  HV   I PAL+ G++++CDRF DSS  YQG         +  L +   
Sbjct: 73  TELLLFLADRSHHVRAKIEPALLRGEVVVCDRFADSSEVYQGLARGLGLERVRRLNQWVC 132

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +  PD T++LDL   +GL R   R            E++ +  HE+ R+ FL  A+ +P
Sbjct: 133 GQCWPDLTLLLDLNPGLGLARAAQRQG-ELGQGPSPMEKEKLEFHERLREGFLAQAQAEP 191

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   VD+A   + VA  I   V  L+++
Sbjct: 192 GRIKPVDAARPAEEVAEAIWAHVEPLLRE 220


>gi|23465074|ref|NP_695677.1| thymidylate kinase [Bifidobacterium longum NCC2705]
 gi|23325685|gb|AAN24313.1| thymidylate kinase [Bifidobacterium longum NCC2705]
          Length = 193

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 15/202 (7%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD----EFGAEAEAIVF 71
           GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL  GVD    +    AEA++F
Sbjct: 2   GKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGGAVDIAPRAEALLF 60

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQEVMP 130
           AA R  HV   IRPAL  G++++ DR+LDSS AYQ G R+ +    + SL   +   ++P
Sbjct: 61  AADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EIRSLSMWATNNLLP 119

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D T +LD+   +   R+++     ESA  D+  R         RQ FLD+A  +P+R  +
Sbjct: 120 DRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQAFLDLAAAEPNRFRV 171

Query: 191 VDSAHSFQSVATNILNIVWELV 212
           +D++ S ++V   I + + EL 
Sbjct: 172 IDASQSIEAVWAAIESDIKELA 193


>gi|283455190|ref|YP_003359754.1| thymidylate kinase [Bifidobacterium dentium Bd1]
 gi|283101824|gb|ADB08930.1| thymidylate kinase [Bifidobacterium dentium Bd1]
          Length = 252

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 33/223 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57
           G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL        
Sbjct: 12  GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 71

Query: 58  GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           GV    A+              EA++FAA R  HV  VIRPAL  G +++ DR+LDSS A
Sbjct: 72  GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 131

Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           YQ      + L L  ++++S+     ++P+ T +LD+       R+++     ESA  D+
Sbjct: 132 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 188

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
             R         R  FL++AR +P+R  ++D++ S + V   I
Sbjct: 189 QNRT--------RNAFLELARAEPERFRVIDASQSIEEVWQRI 223


>gi|238020860|ref|ZP_04601286.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147]
 gi|237867840|gb|EEP68846.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147]
          Length = 210

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 7/188 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGKTT +++++ +   +   V  TREPGGTP  EA R +LL+    +    
Sbjct: 5   FITLDGIDGAGKTTQLNVIRDWFAAQALPVLFTREPGGTPLGEALRALLLNPAT-QVSLH 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E+VI PAL  G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  TETLLMFAARRQHLEDVILPALARGVSVVSDRFTDATFAYQGGGRGLPDGQIEILENWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI+LD+P+ + L+R++     RE    D FE+++     + R+ +L  A   P
Sbjct: 124 GSLKPDLTILLDVPLAVSLQRIERS---REK---DRFEQEEADFFTRVREAYLRRAAAAP 177

Query: 186 DRCHIVDS 193
           +R  +VDS
Sbjct: 178 ERYAVVDS 185


>gi|171741466|ref|ZP_02917273.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC
           27678]
 gi|171277080|gb|EDT44741.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC
           27678]
          Length = 245

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 33/223 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57
           G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL        
Sbjct: 5   GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 64

Query: 58  GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           GV    A+              EA++FAA R  HV  VIRPAL  G +++ DR+LDSS A
Sbjct: 65  GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 124

Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           YQ      + L L  ++++S+     ++P+ T +LD+       R+++     ESA  D+
Sbjct: 125 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 181

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
             R         R  FL++AR +P+R  ++D++ S + V   I
Sbjct: 182 QNRT--------RNAFLELARAEPERFRVIDASQSIEEVWQRI 216


>gi|240103826|ref|YP_002960135.1| thymidylate kinase [Thermococcus gammatolerans EJ3]
 gi|259494283|sp|C5A1K2|KTHY_THEGJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|239911380|gb|ACS34271.1| Thymidylate kinase (dTMP kinase) (tmk) [Thermococcus gammatolerans
           EJ3]
          Length = 208

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 18/211 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           G+F+  EGI+GAGK+T   LL ++ ++K Y+V +T+EP  T   +  R ++L+ G +   
Sbjct: 2   GIFVVIEGIDGAGKSTQAKLLAKWFEKKGYEVILTKEPTDTAFGKLIRKLVLTGGREGII 61

Query: 63  -GA----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            GA    EAEA++FAA R +HV  +I+PAL  GK+++ DR+  SS AYQ  R       +
Sbjct: 62  DGARISHEAEALLFAADRAEHVHKLIKPALESGKVVISDRYFYSSLAYQWARGLDLQWLI 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D L   +V+   PD  ++LDLPV   ++R+  R    E      F+ K V + ++ R+ +
Sbjct: 122 D-LNRFAVR---PDLVVLLDLPVKESMRRINGRSIKTE------FD-KIVELQKRVRENY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L +A   P+   IV++ +S + +  +I+ +V
Sbjct: 171 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLV 200


>gi|134295921|ref|YP_001119656.1| thymidylate kinase [Burkholderia vietnamiensis G4]
 gi|166221731|sp|A4JEW8|KTHY_BURVG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|134139078|gb|ABO54821.1| thymidylate kinase [Burkholderia vietnamiensis G4]
          Length = 206

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ K    +  V VTREPGGTP  EA R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGDRQVVVTREPGGTPLGEALREMLLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R + R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASER---RGAAR---APDKFESETDAFFTRTRDE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A+  P R  IVD+  +   +   +  ++
Sbjct: 172 YLRRAQEAPHRFTIVDATQTIPEIRGRLERVL 203


>gi|289770846|ref|ZP_06530224.1| integral membrane protein with kinase activity [Streptomyces
           lividans TK24]
 gi|289701045|gb|EFD68474.1| integral membrane protein with kinase activity [Streptomyces
           lividans TK24]
          Length = 1107

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    ++V T
Sbjct: 680 ADPGRYLVVDAGQEPEAVTT 699


>gi|284050175|ref|ZP_06380385.1| thymidylate kinase [Arthrospira platensis str. Paraca]
 gi|291571445|dbj|BAI93717.1| thymidylate kinase [Arthrospira platensis NIES-39]
          Length = 231

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 115/229 (50%), Gaps = 25/229 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50
           +G  I FEGIEG GKTT I  ++ +L  +               V VTREPGGT   +  
Sbjct: 2   AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSPGGKLHQPGVQVTREPGGTQLGQHL 61

Query: 51  RHVLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           R +LL   ++E     +E +++AA R  H+E +I+P L +G ++LCDRF DS+ AYQG  
Sbjct: 62  RDLLLHHEINEPLSDRSELLLYAADRAQHIETLIKPLLDQGTMILCDRFTDSTLAYQGYG 121

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +  + +I+   ++PD T+ L++PV+ GL R++ R         D  E+ D+  
Sbjct: 122 RGLDLQQIHQINQIATGGLVPDLTLWLNVPVEAGLTRIKARKK------ADRIEQADLEF 175

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV------WELV 212
           H +  + F  +A+  P R   +D       V   I NI+      W L+
Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKLLEWGLI 224


>gi|21221961|ref|NP_627740.1| integral membrane protein with kinase activity [Streptomyces
           coelicolor A3(2)]
 gi|4539560|emb|CAB38479.1| integral membrane protein with kinase activity [Streptomyces
           coelicolor A3(2)]
          Length = 1089

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    ++V T
Sbjct: 680 ADPGRYLVVDAGQEPEAVTT 699


>gi|229818395|ref|ZP_04448676.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM
           20098]
 gi|229784265|gb|EEP20379.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM
           20098]
          Length = 215

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 17/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           M+ G+FISFEG++G GKTT ++ L+  L+    +V VTREPGGT    A R +LL    V
Sbjct: 3   MHQGIFISFEGVDGVGKTTQVNRLRDELEAMGREVVVTREPGGTALGTAIRRLLLHGVPV 62

Query: 60  DEFGAEA--------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           +    EA        EA++FAA R  HV  VIRPAL  G +++ DR+ DSS AYQ     
Sbjct: 63  ESADGEACADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYCDSSLAYQAGGRE 122

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                + SL   +   ++P  T +LD+   +   R+ +     E+A    F+R+      
Sbjct: 123 LTAAEIRSLSMWATDGLLPVRTYLLDMDPALSHTRLDHDEDRMEAAG-SAFQRRT----- 176

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
             RQ FLD+A  +P+R  ++D++ + + V   I
Sbjct: 177 --RQAFLDLAAREPNRFRVIDASGTVEEVWQAI 207


>gi|318076468|ref|ZP_07983800.1| thymidylate kinase [Streptomyces sp. SA3_actF]
          Length = 896

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 224 TGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 283

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G I++ DR++DSS AYQG       + +  +  
Sbjct: 284 SHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARISR 343

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 344 WATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 395

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P+R  +VD A   +SV   +
Sbjct: 396 AAPERYLVVDGAQEPESVTRTV 417


>gi|269215702|ref|ZP_06159556.1| dTMP kinase [Slackia exigua ATCC 700122]
 gi|269131189|gb|EEZ62264.1| dTMP kinase [Slackia exigua ATCC 700122]
          Length = 247

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 113/214 (52%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG+FI+FEG EGAGK+THI++L   L+R  ++V   REPGGT   EA R V+L    +E
Sbjct: 10  SSGVFITFEGGEGAGKSTHIAILAHVLERLGHEVLRLREPGGTSVGEALRAVVLDPDREE 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119
               +E  VF A+R   V  VI PAL  G ++LCDRF+DS+ AYQ      + + LD+  
Sbjct: 70  MCGLSELFVFEASRAQLVSQVIAPALERGAVVLCDRFIDSTTAYQA---YGRGIDLDAVR 126

Query: 120 -LQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            L  ++ Q  +P  T+++       GL R     + R     D F       H +  Q F
Sbjct: 127 FLNLLACQGTLPARTLLMQAADAHAGLARATTLGADRMEQASDRF-------HARVAQGF 179

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +A  +P+R   V SA S +  A  ++  V +L
Sbjct: 180 DALAACEPERFRAVSSAGSVEDTAVQVVASVSDL 213


>gi|205372020|ref|ZP_03224838.1| thymidylate kinase [Bacillus coahuilensis m4-4]
          Length = 210

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 10/210 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG EGAGKTT +  L   LQ ++ D   TREPGG   AE  R ++L+      
Sbjct: 4   SGYFITVEGPEGAGKTTVVKRLLERLQEESIDAVATREPGGIAIAEDIRSIILNPENTSM 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119
               EA+++AAAR  H+   + PAL +GK+++CDRFLDSS AYQG    ++ L +D   +
Sbjct: 64  DPRTEALLYAAARRQHLVEKVLPALEDGKVIICDRFLDSSLAYQG---YARGLGVDEVLN 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E ++   MP  T+  D+  + GL+R+  R   RE   LD    + +  H K  + +  
Sbjct: 121 INEFAIDGCMPSLTLFFDISPEAGLERIA-RNKGREINRLDL---EGIEFHHKVYEGYKK 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +     +R  +V++      V    L I+ 
Sbjct: 177 VISRNKNRVQLVNADQDVHQVVEEALQIIL 206


>gi|291452943|ref|ZP_06592333.1| thymidylate kinase [Streptomyces albus J1074]
 gi|291355892|gb|EFE82794.1| thymidylate kinase [Streptomyces albus J1074]
          Length = 1104

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 507 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 566

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 567 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 626

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 627 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 678

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
              DR  +VD+    + V T
Sbjct: 679 ADQDRYLVVDAGQQPEEVTT 698


>gi|323359121|ref|YP_004225517.1| thymidylate kinase [Microbacterium testaceum StLB037]
 gi|323275492|dbj|BAJ75637.1| thymidylate kinase [Microbacterium testaceum StLB037]
          Length = 224

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 12/210 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++FEG +GAGKTT  +LL+ +L+    +V  TREPGGT      R ++L    D 
Sbjct: 19  GPGLFVTFEGGDGAGKTTQAALLEAWLRENGREVVRTREPGGTEVGVLVRDIVLHHRGD- 77

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R  H+E V+RPA+  G +++ DR+LDSS AYQG   + + L  D ++
Sbjct: 78  IAPRAEALLYAADRAHHIETVVRPAISRGDVVIQDRYLDSSVAYQG---AGRVLDADDIR 134

Query: 122 EISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++S+     ++PD T++LDL       R+       +    D  E +    H + R  FL
Sbjct: 135 DLSLWATGGLLPDLTVLLDLDPAAARSRLDA-----DEKPFDRLEAEKGEFHTRVRDGFL 189

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +A  +P+R  ++D+      +A  +   V
Sbjct: 190 ALAAAEPERFIVLDARQPVPELADRVREAV 219


>gi|193212981|ref|YP_001998934.1| dTMP kinase [Chlorobaculum parvum NCIB 8327]
 gi|238692645|sp|B3QP81|KTHY_CHLP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|193086458|gb|ACF11734.1| dTMP kinase [Chlorobaculum parvum NCIB 8327]
          Length = 217

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 10/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T +  LKR LQ +  +V   REPGGTP AE  R +LL    D   +
Sbjct: 1   MLITFEGIDGAGKSTQVVKLKRHLQERGREVLTLREPGGTPVAEQIRELLLESHND-ITS 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122
            AE ++F+A+R + +E +I PAL +G  ++ DRF DS+ AYQG     + L LD L E  
Sbjct: 60  IAELLLFSASRAELMEKIIVPALEDGCDVILDRFFDSTTAYQG---YGRGLNLDMLAEIN 116

Query: 123 -ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFL 178
            I+   + PD T  LDL  +  L R  +  SL    ES  LD  E   +  +++ R  + 
Sbjct: 117 RIASHGIRPDITFYLDLTPEDALLRKFSEKSLPLAFESEELDRMENSGLEFYQRVRAGYH 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            I   +P R  ++D+  + Q +   IL+ +  L
Sbjct: 177 AILEAEPQRIIMIDALLTPQEIHRKILSALQAL 209


>gi|315654563|ref|ZP_07907469.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333]
 gi|315491027|gb|EFU80646.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333]
          Length = 239

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 6/203 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++FEG +G GKTT I+    +++ + +DV  TREPGGT    A R +LL  G  +
Sbjct: 29  TQGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--D 86

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA++FAA R  HV  +I PA+ +GK+++ DR+L SS AYQG         +  L 
Sbjct: 87  VSPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGDREIRDLS 146

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LDL  ++   R     SL      D  ER  +   E+ R+ FL ++
Sbjct: 147 LWATGGLVPNLTVLLDLDPEVAAARQAADASL---GSPDRMERAGIEFQERVREDFLRMS 203

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
             Q D   +VD++     +A  +
Sbjct: 204 EGQ-DTWLVVDASLPVAEIAAQV 225


>gi|239981076|ref|ZP_04703600.1| thymidylate kinase [Streptomyces albus J1074]
          Length = 1095

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 498 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 557

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 558 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 617

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 618 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 669

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
              DR  +VD+    + V T
Sbjct: 670 ADQDRYLVVDAGQQPEEVTT 689


>gi|313680451|ref|YP_004058190.1| thymidylate kinase [Oceanithermus profundus DSM 14977]
 gi|313153166|gb|ADR37017.1| thymidylate kinase [Oceanithermus profundus DSM 14977]
          Length = 209

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 10/188 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEG EG+GK+T  + L   L+ +     +T EPGGT      R  LL  G      E
Sbjct: 7   FISFEGPEGSGKSTQAARLAARLRARGVSTVLTHEPGGTELGREVRRWLLHQGA-AMSPE 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++++A R +HV  V+ PAL  G  ++CDRF+DSSYAYQG        +L S+ +  +
Sbjct: 66  AEFLLYSADRAEHVRTVLEPALAAGSFVICDRFVDSSYAYQGYGRGLDLAWLRSVSDGIL 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           + V P  T +LDLP + GL R+  R         D  E + +  H + R+ +  +A+++P
Sbjct: 126 RGVRPSLTFLLDLPPERGLARLAGR---------DRLEGESLTFHRRVREGYRSLAQSEP 176

Query: 186 DRCHIVDS 193
           +R  ++D+
Sbjct: 177 ERFVVLDA 184


>gi|157151481|ref|YP_001450818.1| thymidylate kinase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189030844|sp|A8AYF8|KTHY_STRGC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157076275|gb|ABV10958.1| thymidylate kinase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 212

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL +S EG +GAGK++ +  L   L+ + + V  TREPGG P +EA R V+L     
Sbjct: 1   MKRGLLVSLEGPDGAGKSSVLEALVPILEAQGHQVVTTREPGGVPISEAIREVILDQNNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         ++ L
Sbjct: 61  EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+    + RE   LD    + + +H++ RQ +L  
Sbjct: 121 NQYATDGLKPDLTLYFDLDVEEGLARIAKNKN-REVNRLDL---EGLEMHQRVRQGYLYS 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
               P+R   +D++ + + V  + L ++
Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVL 204


>gi|301155188|emb|CBW14652.1| thymidylate kinase [Haemophilus parainfluenzae T3T1]
          Length = 210

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 115/217 (52%), Gaps = 14/217 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T +  +   L+     D+  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETAELV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL EGKI+L DR   SS AYQG         + +L+ 
Sbjct: 63  TDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLKN 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
           + + +  PD  + LD+    GL R + R  L   E   LD+F R         RQ +L++
Sbjct: 123 MVLGDFEPDFVLYLDIDPAEGLARARGRGELDRIEQQGLDFFHRT--------RQRYLEL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKR 215
            +N P +  I+++  +   V  +I + V  W + Q +
Sbjct: 175 VQNNP-KAAIINAGQALAQVQADIQSAVKSWWVSQAK 210


>gi|212223342|ref|YP_002306578.1| thymidylate kinase [Thermococcus onnurineus NA1]
 gi|229621846|sp|B6YSZ4|KTHY_THEON RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|212008299|gb|ACJ15681.1| thymidylate kinase [Thermococcus onnurineus NA1]
          Length = 205

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 18/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62
           +FI  EGI+GAGK+T   LL  + ++K YDV +T+EP  T   +  R ++L+ G +    
Sbjct: 1   MFIVIEGIDGAGKSTQARLLAEWFKKKGYDVVLTKEPTDTAFGKLIRRLVLTGGKEGIID 60

Query: 63  GA----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           GA    EAEA++FAA R +HV  +I+P+L  GKI++ DR+  SS AYQ  R     L L+
Sbjct: 61  GARISHEAEALLFAADRAEHVHKLIKPSLKTGKIVISDRYFYSSLAYQWARG----LDLE 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L +++   V PD  I+LDLPV   +KR+  R    E      F+ K   + +K R+ +L
Sbjct: 117 WLIDLNRFAVRPDLVILLDLPVKESMKRINGRSIKTE------FD-KIAELQKKVRENYL 169

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +A   P+   IV++  S + +  +I+ +V
Sbjct: 170 KLAERFPE-MRIVNALASVEDIHNDIVALV 198


>gi|325845428|ref|ZP_08168721.1| dTMP kinase [Turicibacter sp. HGF1]
 gi|325488534|gb|EGC90950.1| dTMP kinase [Turicibacter sp. HGF1]
          Length = 222

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG FI+ EG EGAGKTT  + L + L     +   TREPGG   AE  R V+L     
Sbjct: 13  MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  +  EA+++AAAR  H+   ++PA+  GKI+LCDRF+DSS  YQG    ++ + +D +
Sbjct: 73  EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQG---YARGIGMDEV 129

Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +EI   +++  MPD TI  D+  + GL R+    S RE   LD    + +  H+   + +
Sbjct: 130 REINQFAIEGFMPDMTIFFDIKPEDGLARIAAN-SGREVNRLDL---EGLEFHQLVYEGY 185

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              A    +R   VD+  S ++V   I  ++ E + K
Sbjct: 186 KIQANLFSERIVTVDATQSIEAVTNEICQLILEKLGK 222


>gi|148657338|ref|YP_001277543.1| dTMP kinase [Roseiflexus sp. RS-1]
 gi|166223113|sp|A5UY90|KTHY_ROSS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148569448|gb|ABQ91593.1| thymidylate kinase [Roseiflexus sp. RS-1]
          Length = 226

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG EG+GK+T   LL   L  + + V +TREPGGT   +  R ++L     E   
Sbjct: 3   LFVTFEGPEGSGKSTQARLLYESLHARRFPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F+AAR   V  VIRP L +G I+LCDR+ DS++AYQG         L  +   +
Sbjct: 63  TAEMLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTFAYQGYGLGRDLAELRVITAAA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFER---KDVMIHEKRRQIFL 178
              + PD T  LD+    GL+R +    R + +  A  D + R   +++  H++    + 
Sbjct: 123 TGGLRPDITFYLDISAAEGLERKRRKGARSTGQRGANNDEWNRLDARELEYHQRVEAGYR 182

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++    P+R  ++D+  S +++A  I  IV
Sbjct: 183 ELIAADPERWRVLDARQSIEALAEQIGAIV 212


>gi|194336672|ref|YP_002018466.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693358|sp|B4SAG3|KTHY_PELPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|194309149|gb|ACF43849.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 217

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62
           + I+FEGI+GAGK+T I  L   L  +  +  V REPGGT  AE  R +LL  S G+   
Sbjct: 1   MLITFEGIDGAGKSTQIKELVHALGLQGIEAVVLREPGGTTVAEKIRQILLESSHGITPV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E ++F+A+R + V+ VIRPAL  GK ++ DRF DS+ AYQG         L S+  
Sbjct: 61  G---ELLLFSASRAELVQEVIRPALASGKTIILDRFFDSTTAYQGYGRGIDMELLRSIIA 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLD 179
           IS   + PD T  LDL  +  LKR  ++ S+    E   LD  ER  +  +   R+ +LD
Sbjct: 118 ISTCGITPDITFYLDLEPEEALKRKYSKTSIPLAFEGEELDRMERSGLEFYRNVRRGYLD 177

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           I + +  R   +++      +   IL ++ E     ++P+
Sbjct: 178 IKQLENRRFVQLNALDPVAVIHGKILALLGERFPSFLNPV 217


>gi|257784894|ref|YP_003180111.1| thymidylate kinase [Atopobium parvulum DSM 20469]
 gi|257473401|gb|ACV51520.1| thymidylate kinase [Atopobium parvulum DSM 20469]
          Length = 219

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 7/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+ EG++G GK+T  SLL+  L+  N+DV   REPGGT  +E  R V+L+     
Sbjct: 8   SQGLFITLEGVDGCGKSTQASLLREDLKALNFDVVFVREPGGTAISEQIRDVVLNPKNGA 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E +++ A+R   VE VIRPAL  GK++LCDRF DS+YAYQ          +    
Sbjct: 68  MCDECELLLYEASRAQLVEEVIRPALASGKVVLCDRFYDSTYAYQAAGRGLDTDLVHHAN 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +    V PD T++  L   +   R     +       D  E + V   E+    +  + 
Sbjct: 128 RLGSCGVSPDRTLVFMLEPTVAHARATQNDT-------DRLEAEGVAFQERVFAGYKQLL 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +++P+R   +D+  S   V T    ++ +L+
Sbjct: 181 QDEPERVKAIDADGSIDEVRTRTRQLLADLI 211


>gi|322372419|ref|ZP_08046955.1| dTMP kinase [Streptococcus sp. C150]
 gi|321277461|gb|EFX54530.1| dTMP kinase [Streptococcus sp. C150]
          Length = 209

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKT+ + +LL R  +     V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTSVLEALLPRLKEVYPGQVITTREPGGVAIAEQIREVILDVDN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L +G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGAGRGLDQTEIAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GLKR+      RE   LD  E+ D  +H++ R+ +LD
Sbjct: 121 LNAYATDGHKPDVTLLFDVDSETGLKRIAANGE-REVNRLD-LEKLD--MHQRVRKGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A  +P+R  ++D++  F  V  +   I+
Sbjct: 177 LAMVEPERIKLIDASQPFDKVIEDAWQII 205


>gi|319775618|ref|YP_004138106.1| thymidylate kinase [Haemophilus influenzae F3047]
 gi|329122334|ref|ZP_08250922.1| dTMP kinase [Haemophilus aegyptius ATCC 11116]
 gi|317450209|emb|CBY86425.1| thymidylate kinase [Haemophilus influenzae F3047]
 gi|327473895|gb|EGF19312.1| dTMP kinase [Haemophilus aegyptius ATCC 11116]
          Length = 219

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 12  GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 72  TAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + +
Sbjct: 132 TVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 185

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210


>gi|261856504|ref|YP_003263787.1| thymidylate kinase [Halothiobacillus neapolitanus c2]
 gi|261836973|gb|ACX96740.1| thymidylate kinase [Halothiobacillus neapolitanus c2]
          Length = 217

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 5/205 (2%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN+ G+FI+ EGIEGAGK+T I+ +  + +    +V  TREPGGTP AEA R VLL+   
Sbjct: 1   MNAPGIFITIEGIEGAGKSTAIAGVAEWFRAHGREVDCTREPGGTPIAEAIREVLLNPAE 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     E ++  AAR  HV   I+P L  GK+++ DRF DSS AYQG         +++
Sbjct: 61  EDLVPPTELMLMFAARAQHVAGRIKPGLAAGKVVISDRFTDSSRAYQGAGRGMDRSLIET 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + + Q V PD T++LDLPVD+G+KR   R         D FER+     E+ R  FL+
Sbjct: 121 LAQTAEQGVSPDLTLLLDLPVDVGMKRAAARRGAGAH---DRFERERHDFFERVRAGFLE 177

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A  Q  R  ++D+A     V   I
Sbjct: 178 LA-GQSTRFALIDAAAPIADVHMQI 201


>gi|314932704|ref|ZP_07840074.1| dTMP kinase [Staphylococcus caprae C87]
 gi|313654534|gb|EFS18286.1| dTMP kinase [Staphylococcus caprae C87]
          Length = 205

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/195 (35%), Positives = 111/195 (56%), Gaps = 8/195 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ IS + + L   + DV  TREPGG P  E  R V+L    ++    
Sbjct: 4   FITFEGPEGAGKTSVISKVSQKLA-TDMDVITTREPGGVPTGEEIRRVVLEG--NKMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++D   HEK  + +  I  + P
Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRIIDSDP 175

Query: 186 DRCHIVDSAHSFQSV 200
           +R   V++    ++V
Sbjct: 176 ERFVKVNADQDLENV 190


>gi|29831165|ref|NP_825799.1| thymidylate kinase [Streptomyces avermitilis MA-4680]
 gi|29608279|dbj|BAC72334.1| putative thymidylate kinase [Streptomyces avermitilis MA-4680]
          Length = 1073

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEVARISR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
               R  IVD+    ++V T I
Sbjct: 680 ADLGRYLIVDAGQEPEAVTTVI 701


>gi|325283899|ref|YP_004256440.1| Thymidylate kinase [Deinococcus proteolyticus MRP]
 gi|324315708|gb|ADY26823.1| Thymidylate kinase [Deinococcus proteolyticus MRP]
          Length = 211

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 13/215 (6%)

Query: 1   MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M++G   FI+FEG EGAGK+T ++ L   L+       +T+EPGGT A +  R  LL   
Sbjct: 1   MSAGTLPFITFEGGEGAGKSTQLARLAARLEAAGVPHLLTKEPGGTAAGDQIRATLLDPA 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +D     AE ++++A+R   V  V++PAL  G++++CDR+ DS+ AYQG        FL 
Sbjct: 61  LD-IDPLAEFLLYSASRAQLVREVLQPALERGELVVCDRYADSTLAYQGYGRGLPLPFLQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++   +   + P  T++LDL   +GL RV  R         D  ER D+  H + R  FL
Sbjct: 120 AVTAEATGGLTPALTVLLDLDPAVGLARVAQR------GQADRLERADLDFHRRLRAGFL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +A  QP R  ++D+  S    A  +   +W  VQ
Sbjct: 174 ALAEQQPQRWLVLDAGRS----ADELEEAIWARVQ 204


>gi|254517430|ref|ZP_05129486.1| dTMP kinase [Clostridium sp. 7_2_43FAA]
 gi|226911179|gb|EEH96380.1| dTMP kinase [Clostridium sp. 7_2_43FAA]
          Length = 209

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 120/216 (55%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G FI FEG +G+GK+T + ++  +L   N +   TREPGG   +E  R V+L     
Sbjct: 1   MDKGKFIVFEGGDGSGKSTILDMVYDYLIENNIECIKTREPGGIKISEDIREVILDTKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  +  EA+++AAAR  H+   + P +  G I+LCDRF+ SS AYQG    ++++ +D +
Sbjct: 61  KMDSRTEALLYAAARRQHLVEKVIPEIDRGAIVLCDRFIYSSLAYQG---YARNIGIDEI 117

Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +I   +V E MPD  I+ DL  +IGL+R+ N+   RE   LD  E+ D   H K R  +
Sbjct: 118 YQINKFAVGEYMPDLNILFDLSPEIGLERI-NKNKEREINRLD-LEKID--FHNKVRDGY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           L +     ++   +++  S + V   +  I+ + ++
Sbjct: 174 LKLYEENKEKFVKINAEKSIEEVFNVVKEIITDFIK 209


>gi|119469414|ref|ZP_01612353.1| thymidylate kinase [Alteromonadales bacterium TW-7]
 gi|119447278|gb|EAW28547.1| thymidylate kinase [Alteromonadales bacterium TW-7]
          Length = 208

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG+EGAGK+T ISL + FL +K  +    REPGGTP AE+ R ++ +   +E   E
Sbjct: 5   FIVVEGLEGAGKSTAISLCQDFLNKKQIEYINVREPGGTPLAESLRTLVKAEHKEEIAFE 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR   + NVI PAL +GK +L DR   SS AYQG         L SL  + +
Sbjct: 65  TELLIMYAARSQLMHNVINPALEQGKWILADRHDLSSQAYQGGGRGISSNTLASLSSMVL 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           + + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  +L++A +  
Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELASDD- 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +    VD+      V  +I N++
Sbjct: 178 NSIKTVDANQEIDKVHRDITNVL 200


>gi|152964459|ref|YP_001360243.1| dTMP kinase [Kineococcus radiotolerans SRS30216]
 gi|151358976|gb|ABS01979.1| dTMP kinase [Kineococcus radiotolerans SRS30216]
          Length = 662

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
            G F++ EG +G+GKTT  +LL  +L+ + ++V VTREPGGT      R VLL+   +E 
Sbjct: 446 GGCFVALEGGDGSGKTTQATLLAEWLRERGHEVVVTREPGGTATGRELREVLLNHRGEEQ 505

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA++FAA R  HV  V+RP L  G ++L DR++DSS AYQG         +++L
Sbjct: 506 PLSPRAEALLFAADRAQHVAEVVRPGLDRGAVVLTDRYVDSSLAYQGAGRDLPAAEVETL 565

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + Q ++PD T++LD      +            A  D  E +    H + R+ FL +
Sbjct: 566 STWATQGLLPDLTVVLD------VDPATAARRRAGRAADDRMEAESQAFHARVREQFLLL 619

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
           A   P R  ++D++ S + V
Sbjct: 620 AARDPARYLVLDASTSPEVV 639


>gi|229083343|ref|ZP_04215702.1| Thymidylate kinase [Bacillus cereus Rock3-44]
 gi|228699968|gb|EEL52594.1| Thymidylate kinase [Bacillus cereus Rock3-44]
          Length = 208

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GK+T I+ L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIREILHKQEHTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL    ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALERNYLVLCDRFIDSSLAYQG---YARGLGVDKVYE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP+ TI LD+  ++GL R++   + RE   LD    + +  H++ R+ +L 
Sbjct: 119 INRFATEDCMPNLTIYLDIEPEVGLARIEKDAN-REVNRLDM---ESIKFHKRVREGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     +R  +V++    + +   ++ ++
Sbjct: 175 LVDRFANRIVVVNADQPMEEIMEEVIQLI 203


>gi|206603846|gb|EDZ40326.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG']
          Length = 220

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 114/204 (55%), Gaps = 6/204 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ I+FEGI+G+GK+T    +   L     +V ++REPG TP  E  R++LLS  V   
Sbjct: 6   TGILITFEGIDGSGKSTQARDIHNALSLAGLNVRLSREPGATPLGEEIRNILLSDKV-PV 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AE  +F A R +HV++V+RP+   G++LL DRF+D++ AYQG         +++L +
Sbjct: 65  GNLAELFLFLADRAEHVQDVLRPSRSNGEVLLVDRFIDATTAYQGYGMGHPLSLIENLHK 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +QE+ P  T +LD+      +R++ R   +     +  E + +   +K R  +L+IA+
Sbjct: 125 TILQEIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFQKVRNGYLEIAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
             P R  ++D+    + +   ILN
Sbjct: 180 QNPHRFRVLDATLPREELNRAILN 203


>gi|317050750|ref|YP_004111866.1| thymidylate kinase [Desulfurispirillum indicum S5]
 gi|316945834|gb|ADU65310.1| thymidylate kinase [Desulfurispirillum indicum S5]
          Length = 208

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 7/208 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FISFEG +GAGKTT +SLL R+L  ++   H TREPGGTP AEA R+++        
Sbjct: 2   NGRFISFEGPDGAGKTTQLSLLSRYLDDRDILHHCTREPGGTPGAEAIRNLIFDS-RHNL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++FAAAR  HVE  I P L +G  +LCDRF  S+  YQG         +  L  
Sbjct: 61  VPRAELLLFAAARAQHVEERIMPLLEKGIWVLCDRFTLSTLVYQGYGRGLDRELIGQLNA 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   + P   ++LD+  + G  RVQ R     S     F+      H +    F ++A 
Sbjct: 121 IATCGLAPHMQLVLDVEAEAGQNRVQQRLENNNS-----FDALSEDFHRRVVAGFREVAS 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +    C ++D + + + V  +I+  + E
Sbjct: 176 HDA-HCRLIDGSRNPEQVHGSIVAALHE 202


>gi|322392107|ref|ZP_08065569.1| thymidylate kinase [Streptococcus peroris ATCC 700780]
 gi|321145007|gb|EFX40406.1| thymidylate kinase [Streptococcus peroris ATCC 700780]
          Length = 212

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  +   L+ KN +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSIEGPEGAGKTSVLEAILPVLEEKNIEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL+R+    S RE   LD    + + +H K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAAN-SNREVNRLDL---EGLDLHRKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++     V  N   ++++
Sbjct: 177 LEKEGERIVKIDASLPLDQVVENTKQVLFD 206


>gi|295837412|ref|ZP_06824345.1| dTMP kinase [Streptomyces sp. SPB74]
 gi|295826517|gb|EDY43005.2| dTMP kinase [Streptomyces sp. SPB74]
          Length = 1172

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 493 NGFFLALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 552

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG       + +  +  
Sbjct: 553 SHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPVEIARISR 612

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 613 WATGGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRTGFLTLAA 664

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P+R  +VD A   +SV   +
Sbjct: 665 AAPERYLVVDGAQEPESVTRTV 686


>gi|168334030|ref|ZP_02692249.1| thymidylate kinase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 200

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 120/211 (56%), Gaps = 18/211 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLFI+ EG EG+GKTT  SLLK   +  N  V  TREPGG  +AE+ R  +    +D
Sbjct: 1   MNRGLFIAIEGGEGSGKTTLCSLLKTHFEADNIPVIATREPGGIESAESIRDNIFQFDLD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ + +++ AAR +H+ + I PAL  GK++L DRF  S+ AYQG    + +L +D +
Sbjct: 61  ---AKTDLLLYLAARREHLIHTILPALNAGKLVLSDRFYLSTLAYQG---YASNLDIDII 114

Query: 121 QEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           Q+ +     +++PD  II+DLP +IGL         R+   ++ F+ K +  H K  + +
Sbjct: 115 QKFNNFVCDDILPDLNIIIDLPPNIGLS--------RKGVDINRFDLKGLDFHTKVYEGY 166

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L ++ +  +  +++D   S  S+   I +++
Sbjct: 167 LQLSASIKN-VYLIDGTSSLTSLEHQIYSLI 196


>gi|320010005|gb|ADW04855.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331]
          Length = 1036

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F+  EG +GAGK+T +  +  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 506 NGFFLVLEGGDGAGKSTQVEAIAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+      +R         +   D  E +    H++ R  FL +A 
Sbjct: 626 WATSGLVPHLTVLLDVDPQTARERF--------TEAPDRLESEPAEFHDRVRSGFLTLAA 677

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    +++ T
Sbjct: 678 ADPARYLVVDAGQEAEAITT 697


>gi|56460444|ref|YP_155725.1| thymidylate kinase [Idiomarina loihiensis L2TR]
 gi|73920821|sp|Q5QZ32|KTHY_IDILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56179454|gb|AAV82176.1| Thymidylate kinase [Idiomarina loihiensis L2TR]
          Length = 205

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 7/208 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI  EG+EGAGK++ I+ +   LQ K   V   REPGGTP AE+ R ++     ++ 
Sbjct: 2   SGKFIVIEGLEGAGKSSAIASVVTHLQAKGIQVETVREPGGTPLAESLRDLVKKKWEEKV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  A+R+  V+N+I+PAL + + ++ DR   SS AYQG         L  +++
Sbjct: 62  SPTTELLLMYASRVQLVDNIIKPALSKNRWVIGDRHDLSSRAYQGGGRELGDELLQKIRK 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++    PD T++LD+    GL+R       RE   LD  E +D+   ++ RQ +L+IA 
Sbjct: 122 ITLGNFTPDLTLLLDVEEKKGLERA------RERGELDRIEEEDLAFFQRTRQRYLNIAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P    ++D+  S   V  +IL  + E
Sbjct: 176 KDPS-IIVIDANQSMLDVHQSILRAIEE 202


>gi|332035197|gb|EGI71706.1| thymidylate kinase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 208

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG+EGAGK+T ISL + FL ++  D    REPGGTP AE+ R ++ +   +E   E
Sbjct: 5   FIVIEGLEGAGKSTAISLCQDFLNKQKIDFINVREPGGTPLAESLRTLVKAEHEEEIAFE 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR   + NVI PAL +G+ +L DR   SS AYQG         L SL  + +
Sbjct: 65  TELLIMYAARSQLMHNVITPALDKGQWVLADRHDLSSQAYQGGGRGISSNTLASLSSMVL 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           + + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  ++++A N  
Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYVELA-NDD 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +    VD+  S   V  +I N++
Sbjct: 178 NTIKTVDANQSIDKVHRDITNVL 200


>gi|145628830|ref|ZP_01784630.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
 gi|144979300|gb|EDJ88986.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
          Length = 210

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 63  TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + +
Sbjct: 123 TVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 177 DNP-KAVVINAEQSIELVQADIESAV 201


>gi|81298904|ref|YP_399112.1| thymidylate kinase [Synechococcus elongatus PCC 7942]
 gi|81167785|gb|ABB56125.1| thymidylate kinase [Synechococcus elongatus PCC 7942]
          Length = 215

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 106/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLL 55
           MN G FI  EGI+G GK+T +  L  +L      +    +  TREPG T   +A R +LL
Sbjct: 1   MNFGNFIVLEGIDGCGKSTQLQRLVNWLPHSSLLQPGQVIVATREPGDTALGQALRSLLL 60

Query: 56  S--CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           +           AE +++AA R  HVE V+RP L  G +++CDR++DS+ AYQG      
Sbjct: 61  TQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAVVVCDRYVDSTVAYQGYGRGLD 120

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              +  L  ++   +  D T+ LDLPV I  +R Q R         D  E   +   E+ 
Sbjct: 121 QSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQARGQ------GDRMEAAGLAFQERL 174

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           RQ F  IA  +PDR   +D+A     VA  I  +V
Sbjct: 175 RQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVV 209


>gi|15643856|ref|NP_228905.1| thymidylate kinase [Thermotoga maritima MSB8]
 gi|8134526|sp|Q9X0I3|KTHY_THEMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|160286313|pdb|2Z0H|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|160286314|pdb|2Z0H|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|238828331|pdb|3HJN|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|238828332|pdb|3HJN|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|4981644|gb|AAD36175.1|AE001769_5 thymidylate kinase [Thermotoga maritima MSB8]
          Length = 197

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL ++L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLE---EEVTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R + +   I+  L EG  +L DR+ DSS AYQG   +     ++ L + +
Sbjct: 58  KAELFLFLASR-NLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  LKR            L+ FE+++ +  E+ R+ +L +AR  
Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKREFL--ERVREGYLVLAREH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211
           P+R  ++D   S + +  +++  V   W+L
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVKRRWKL 195


>gi|119897886|ref|YP_933099.1| thymidylate kinase [Azoarcus sp. BH72]
 gi|119670299|emb|CAL94212.1| dTMP kinase [Azoarcus sp. BH72]
          Length = 206

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 10/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGI+GAGK++ I+ +   L+ +   V  +REPGGTP  E  R +LL    +
Sbjct: 1   MQHGRFITFEGIDGAGKSSQIAAVVDILRARGCTVEQSREPGGTPLGERLRELLLH---E 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119
               E EA++  AAR +H+   I PAL  G  ++CDRF D++YAYQ G R  ++  F D+
Sbjct: 58  PMNLETEALLMFAARREHLAARIVPALQAGNWVVCDRFSDATYAYQVGGRGLAREKF-DA 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+      + PD T++ DLP +I   RV     +   A  D FER+     E+ R  +L+
Sbjct: 117 LEAWVHPGLQPDLTLVFDLPPEIAAARV-----VSSGAQPDRFEREQRDFFERVRNAYLE 171

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            A+  P R  ++D+    + +   I  +V E
Sbjct: 172 RAQAAPQRIRVIDANRPPEVIRAEIEQLVVE 202


>gi|328955029|ref|YP_004372362.1| thymidylate kinase [Coriobacterium glomerans PW2]
 gi|328455353|gb|AEB06547.1| thymidylate kinase [Coriobacterium glomerans PW2]
          Length = 242

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 10/210 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           S  FI+ EGI+G GK+T   LL   L+   Y+V + REPGG   +E  R +LL     E 
Sbjct: 23  SPAFITLEGIDGCGKSTQARLLAATLEHAGYEVELLREPGGAAISEKIRQLLLDPANAEM 82

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  E +++ AAR   V  +I PAL  G++++CDRF DS+ +YQ          +D+   
Sbjct: 83  SATCELMLYEAARAQLVHQLIVPALQTGRVVVCDRFYDSTTSYQSFGSGIDRATVDTANG 142

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V  + P  TI+ D+  D+  +R+  R         D  E K     ++  + F  IA 
Sbjct: 143 LAVGAIRPLITIVCDIAPDLAAERMPGR-------ARDRMEAKGAAFQQRAAEGFRAIAA 195

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+R  ++D++   + VA  +L  V EL+
Sbjct: 196 EEPERVRLIDAS---EDVAHVLLRSVAELI 222


>gi|326802968|ref|YP_004320786.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650724|gb|AEA00907.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 226

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 118/213 (55%), Gaps = 9/213 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62
           G+FISFEG +G+GKTT I  LK  L +      + +REPGG   AE  R ++LS    E 
Sbjct: 3   GVFISFEGPDGSGKTTLIKGLKARLDQDLKQAPIFSREPGGDRIAEEIRDIILSPVNTEL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A +EA+++AA+R  H+   IRPAL  G ++LCDR++DSS AYQG         +  +  
Sbjct: 63  DARSEALLYAASRAQHLAQKIRPALAAGNMVLCDRYVDSSIAYQGYGRKLGGQAVQLINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  ++PD T+  D+  + G+ R++       +  ++  +++ +  H +  Q + D+ +
Sbjct: 123 FAIDGLLPDLTLYCDISAEEGIARIE----AGRTNEINRLDQESIAFHRRVVQGYQDLLK 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             PDR   +D++   +++        +EL+++R
Sbjct: 179 ENPDRIVPIDASQPAEAMQA----AAYELIRQR 207


>gi|260582278|ref|ZP_05850071.1| thymidylate kinase [Haemophilus influenzae NT127]
 gi|260094646|gb|EEW78541.1| thymidylate kinase [Haemophilus influenzae NT127]
          Length = 219

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++ P +  ++++  S + V  +I
Sbjct: 185 KDNP-KAVMINAEQSIELVQADI 206


>gi|170289496|ref|YP_001739734.1| dTMP kinase [Thermotoga sp. RQ2]
 gi|238688806|sp|B1L821|KTHY_THESQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|170176999|gb|ACB10051.1| dTMP kinase [Thermotoga sp. RQ2]
          Length = 197

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL ++L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLE---EEVTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R + +   I+  L EG  +L DR+ DSS AYQG   +     ++ L +++
Sbjct: 58  KAELFLFLASR-NLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDLA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  LKR            L+ FE+++ + H   R+ +L +AR  
Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKREFLEH--VREGYLVLAREH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211
           P+R  ++D   S + +  +++  V   W+L
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVERRWKL 195


>gi|289548995|ref|YP_003473983.1| thymidylate kinase [Thermocrinis albus DSM 14484]
 gi|289182612|gb|ADC89856.1| thymidylate kinase [Thermocrinis albus DSM 14484]
          Length = 199

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 18/209 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+G+GKTT    L  FLQ++ Y   + ++PG TP AE  R +L    +D    
Sbjct: 1   MLISIEGIDGSGKTTVAHALVDFLQKEGYPAVLFKDPGDTPLAEEIRSLLFKYEMDPI-- 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F AAR       I PAL EGKI++ DRF+DS+ AYQG         +  L  I+
Sbjct: 59  -TELLLFEAARSSLTWEKILPALSEGKIVILDRFIDSTVAYQGYGREINLGTVSILNHIA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + P+ T++L++P+ + L R+ +R           FER++ +   K R  ++ +A  +
Sbjct: 118 TRGIKPNLTLLLNVPLHVALSRLSDR---------SRFEREEYL--RKVRDAYILLAHQE 166

Query: 185 PDRCHIVDSAHS----FQSVATNILNIVW 209
            +R  IVD++ S    F+ V T +L++++
Sbjct: 167 KERIKIVDASRSFEEVFEEVKTEVLSVLY 195


>gi|227486758|ref|ZP_03917074.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235228|gb|EEI85243.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
          Length = 207

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 12/214 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI FEG +G+GKTT I  +K  L+ K+Y +   REPGGT  +E  R +++       
Sbjct: 2   NGKFIVFEGPDGSGKTTIIKKVKELLENKDYSISYYREPGGTSISEKIRSIIIDNDNYMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA++FA++R   V   I P L EGKI++CDRF+ SS  YQG     + L +D+++ 
Sbjct: 62  DAKTEALLFASSRAQLVAEKITPDLKEGKIVICDRFVMSSLLYQG---LGRALGVDNIKT 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   +   + PD T+  ++     L+R +  +S       D  E +D   H+     ++ 
Sbjct: 119 INDFATGGLKPDLTLFFNIDYKTALERKRANFS------PDRLENEDFSFHKTIFDGYMK 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A    D    VD+  S + +  +++NI+++L++
Sbjct: 173 MADLYKDEIKKVDARKSIEDLTEDVINIIYQLLE 206


>gi|260905520|ref|ZP_05913842.1| thymidylate kinase [Brevibacterium linens BL2]
          Length = 904

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 8/208 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           + +G FI+ EG +G+GK+T I  + + L  + Y V  TREPGGT      R VL     +
Sbjct: 409 LGAGFFIAIEGGDGSGKSTQIKRVSQILADEGYSVEATREPGGTELGRQIRSVLFDS--E 466

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++FAA R  HV +++ P+L  G I++ DR++DS+ AYQ    +     + +L
Sbjct: 467 PPSPRTEALLFAADRAHHVASLVDPSLDSGNIVITDRYIDSTIAYQAAGRNFDPKTILAL 526

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + + Q ++P  TI+LD+  ++   R+  R         +Y + ++   H++ RQ +L  
Sbjct: 527 SKWATQGLVPHLTIVLDIDPEVSATRMGKRGE------NNYLDEENQQFHQRVRQTYLTR 580

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A  +PDR  ++D++ S + +   IL  +
Sbjct: 581 AHKEPDRYIVLDASVSEEDLTAEILTAI 608


>gi|329117616|ref|ZP_08246333.1| dTMP kinase [Streptococcus parauberis NCFD 2020]
 gi|326908021|gb|EGE54935.1| dTMP kinase [Streptococcus parauberis NCFD 2020]
          Length = 218

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           ++ GL I+FEG +GAGKT+ +  L   L+ + + ++  TREPGG   AE  R V+L    
Sbjct: 8   LSKGLIITFEGPDGAGKTSVLEALLPLLKAEFDKELITTREPGGVAIAEEIREVILDVNN 67

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PA   GKI+L DRF+DSS AYQG         +  
Sbjct: 68  TAMDYKTELLLYIAARRQHLVEKVLPAKEAGKIVLMDRFIDSSVAYQGSGRGLDKADIQW 127

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           L + +   V PD T+  D+P  +GL R+ +NR        L+  E     +H+  R  +L
Sbjct: 128 LNDFATDGVDPDLTLYFDVPSSVGLARIAKNRTHEVNRLDLEKLE-----MHQAVRNGYL 182

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++A+  P+R   +D+++  + V ++  N +
Sbjct: 183 ELAKENPNRIVTIDASNVLEQVISDAFNAI 212


>gi|90579079|ref|ZP_01234889.1| putative thymidylate kinase [Vibrio angustum S14]
 gi|90439912|gb|EAS65093.1| putative thymidylate kinase [Vibrio angustum S14]
          Length = 209

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 12/213 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           G FI  EG+EGAGK+T I  ++    Q   +D   TREPGGTP AE  R ++     DE 
Sbjct: 3   GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHDPASTREPGGTPLAEQMRALVKEGHPDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR+  V+NVI+PAL +G+ ++ DR   SS AYQG         +++L+
Sbjct: 63  LTDMAELLLLYAARIQLVDNVIKPALNQGQWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI +D+  ++GL+R + R        LD  E+ +V    + R  FL+++
Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNVDFFHRARARFLELS 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNI---LNIVWEL 211
            NQP+   I+D++ S   V  ++   LN   EL
Sbjct: 177 ENQPN-VIIIDASQSLDKVTEDLQSALNAWLEL 208


>gi|73667393|ref|YP_303409.1| thymidylate kinase [Ehrlichia canis str. Jake]
 gi|123614707|sp|Q3YR44|KTHY_EHRCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72394534|gb|AAZ68811.1| thymidylate kinase [Ehrlichia canis str. Jake]
          Length = 202

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 106/191 (55%), Gaps = 19/191 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSC-GVD 60
           +FI+FEGI+G+GKTT   LL  +L  K Y V+   +TREPGGT   EA R +L    G+D
Sbjct: 1   MFITFEGIDGSGKTTQSHLLTEYLS-KIYGVNNVVLTREPGGTLLNEAVRDLLFQAKGLD 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +E + F A R +H   VI+P+LM+ KI++CDRF+DS+ AYQG         +  L
Sbjct: 60  SL---SELLFFIAMRREHFMKVIKPSLMQKKIVVCDRFIDSTIAYQGYGQGIDCNLICQL 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++ V ++ PD T ++D+ V   L R          +C + +E  ++  + + R  F  I
Sbjct: 117 NDLVV-DMYPDITFVIDVDVHESLSR----------SCKNGYEFAELEFYYRVRNGFYSI 165

Query: 181 ARNQPDRCHIV 191
               P RCHI+
Sbjct: 166 VEKNPHRCHII 176


>gi|223044432|ref|ZP_03614465.1| thymidylate kinase [Staphylococcus capitis SK14]
 gi|222442221|gb|EEE48333.1| thymidylate kinase [Staphylococcus capitis SK14]
          Length = 205

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 8/195 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ IS + + L   + DV  TREPGG P  E  R V+L    +     
Sbjct: 4   FITFEGPEGAGKTSVISKVSQKLA-TDMDVITTREPGGVPTGEEIRRVVLEG--NNMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++D   HEK  + +  +  + P
Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRVIDSDP 175

Query: 186 DRCHIVDSAHSFQSV 200
           +R   V++    ++V
Sbjct: 176 ERFVKVNADQDLENV 190


>gi|315126343|ref|YP_004068346.1| thymidylate kinase [Pseudoalteromonas sp. SM9913]
 gi|315014857|gb|ADT68195.1| thymidylate kinase [Pseudoalteromonas sp. SM9913]
          Length = 208

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG+EGAGK+T I+L + FL   + D    REPGGTP AE+ R ++ +   +E   E
Sbjct: 5   FIVIEGLEGAGKSTAIALCQDFLNHHHIDFINVREPGGTPLAESLRTLVKAEHQEEIAFE 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR   + NVI PAL +G+ +L DR   SS AYQG         L SL  + +
Sbjct: 65  TELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSSMVL 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           + + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  ++++A N  
Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYIELA-NDD 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           D    VD+  S   V  +I N++
Sbjct: 178 DSIKTVDANQSIDKVHRDITNVL 200


>gi|303233183|ref|ZP_07319856.1| dTMP kinase [Atopobium vaginae PB189-T1-4]
 gi|302480768|gb|EFL43855.1| dTMP kinase [Atopobium vaginae PB189-T1-4]
          Length = 207

 Score =  115 bits (289), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 7/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G GKTT +  L    +R    V   REPGGT  +EA R ++L+  +     
Sbjct: 1   MFITFEGIDGCGKTTQVKRLVSAFRRAGNKVVSLREPGGTTISEAIRSMVLNPAMSSMCN 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E +++ AAR   V  VI PAL    +++CDR+ DS++AYQ          +    E+ 
Sbjct: 61  ETELLLYEAARAQLVREVIEPALARDVVVVCDRYADSTFAYQYAARGLDKELVCRANELG 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              V+PD TI+LD+ VD   +R   +      +C D  E++      + R  ++++AR  
Sbjct: 121 SCGVVPDITIVLDMDVDTAYRRATAQ------SC-DRLEQEGREFQTRVRNGYIELARLY 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P+R H++    + Q+V   I  ++ E
Sbjct: 174 PERVHLIGGDDTPQAVFNRICVVLGE 199


>gi|325266947|ref|ZP_08133618.1| dTMP kinase [Kingella denitrificans ATCC 33394]
 gi|324981688|gb|EGC17329.1| dTMP kinase [Kingella denitrificans ATCC 33394]
          Length = 218

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 10/216 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+G+GKTT +++++ +   +   V  TREPGGTP  E  R +LL          
Sbjct: 7   FITLDGIDGSGKTTQLNVIREWFAARKMPVVFTREPGGTPLGEKLRELLLDPQT-RVSLR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E+V+ PAL +G  ++ DRF D+++AYQG         ++ L++   
Sbjct: 66  TETLLMFAARRQHLEDVVLPALAQGIHVVSDRFTDATFAYQGGGRGLPTAEVEVLEDWVQ 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI+LD+P+++ + R++       S   D FER+D     + R  +L  A   P
Sbjct: 126 GSLRPDLTILLDVPLEVSVARIEG------SRDKDRFEREDSAFFARVRAAYLQRAAQSP 179

Query: 186 DRCHIVDSAHSFQSVATNI---LNIVWELVQKRVSP 218
            R  +++S      V  +I   LN ++   +    P
Sbjct: 180 QRYAVINSHRDKAEVKQDIEAVLNRLFRFAETEKQP 215


>gi|253996507|ref|YP_003048571.1| thymidylate kinase [Methylotenera mobilis JLW8]
 gi|253983186|gb|ACT48044.1| thymidylate kinase [Methylotenera mobilis JLW8]
          Length = 201

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 11/204 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG++GAGK+THI+ + + L  +  +V  TREPGGT   E  R +LL    D    E
Sbjct: 5   FITLEGMDGAGKSTHIADIIKALSARGVEVVSTREPGGTELGERLRELLLH---DAMHPE 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR +H+ NVI PAL  G  +L DRF D++YAYQ          ++ L E+ V
Sbjct: 62  TETLLMFAARREHIANVIAPALARGAYVLSDRFTDATYAYQCGAKGVLASKIEQL-ELWV 120

Query: 126 QEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           QE + PD T++ D+PV++ ++R      L  +   D FER+      + R  +L  A+  
Sbjct: 121 QESLQPDLTLLFDVPVEVSMQR------LSAARAPDKFERESADFFTRIRNAYLQRAQQN 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           P R  ++DS      VA +++  +
Sbjct: 175 PARFKVIDSNRPLDEVAQSVMQAI 198


>gi|319898025|ref|YP_004136222.1| thymidylate kinase [Haemophilus influenzae F3031]
 gi|317433531|emb|CBY81914.1| thymidylate kinase [Haemophilus influenzae F3031]
          Length = 219

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKYETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTAKAELLMLYAARVQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLGFFHRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++ P +  ++++    + V  +I
Sbjct: 185 KDNP-KAVVINAEQRIELVQADI 206


>gi|186686536|ref|YP_001869732.1| thymidylate kinase [Nostoc punctiforme PCC 73102]
 gi|238691253|sp|B2IZE7|KTHY_NOSP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|186468988|gb|ACC84789.1| thymidylate kinase [Nostoc punctiforme PCC 73102]
          Length = 211

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I FEG+EG GKT+ + L  ++L+     V VTREPGGT      R +LL    D+ 
Sbjct: 2   GGKLIVFEGVEGCGKTSQMQLCSQWLESLGVSVVVTREPGGTELGLHLRRLLLEKAEDKP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            AE  E +++AA R  HVE  ++P L  GK +LCDR+ DS+ AYQG         ++ L 
Sbjct: 62  VAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTIAYQGYGRGLNMSLINQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+   +  D TI LD+ V++GL R +      +   LD  E++ +  H + +Q + ++A
Sbjct: 122 YIATAGLESDLTIWLDIDVEVGLTRKRG-----DGIALDRIEQETIAFHRRVQQGYAELA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            + P R   VD + S ++V   I  I+
Sbjct: 177 ASYPSRIVRVDGSLSKEAVQQVIQEIL 203


>gi|317486321|ref|ZP_07945152.1| thymidylate kinase [Bilophila wadsworthia 3_1_6]
 gi|316922432|gb|EFV43687.1| thymidylate kinase [Bilophila wadsworthia 3_1_6]
          Length = 208

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 2/197 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEG+GKTT I  L    +  N++V VTREPGG       R +LL+    E   
Sbjct: 1   MFITLEGIEGSGKTTLIENLADVFRTLNHEVLVTREPGGCALGRELRQMLLNPET-EICP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  +F A R  HV  VIRPAL  G+++LCDR+ DS+  YQG         L SL +++
Sbjct: 60  EAELFLFLADRAQHVAEVIRPALKRGEVVLCDRYADSTVVYQGYGRGLDIEKLRSLNDVA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  + PD T +LD+     LKR + R + L  S     FE + +  H + R+ F   A +
Sbjct: 120 IGGLWPDRTFVLDMDPADALKRARRRNAELGLSEKEGRFEAEQMPFHTRIREGFKLWAAH 179

Query: 184 QPDRCHIVDSAHSFQSV 200
              R  ++D+A S + +
Sbjct: 180 NTKRIVVLDAADSPEGL 196


>gi|303325943|ref|ZP_07356386.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3]
 gi|302863859|gb|EFL86790.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3]
          Length = 217

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 5/214 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEGIEG+GK+T   LL   LQ   YD  +TREPGG     + R +LL        +
Sbjct: 1   MFISFEGIEGSGKSTAQRLLAEHLQGLGYDPLLTREPGGCALGRSLRPILLDARTRGLSS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R  HV  VIRPAL  G+ +LCDR+ DS+ AYQG         L  + +++
Sbjct: 61  RAELYLFLADRAQHVAEVIRPALEAGQTVLCDRYADSTLAYQGYGRGLDPEHLRRINDMA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIFLDIA 181
              +MPD T++LDLPV  GL+R   R   RE   +     F+ + +  HE+ RQ +  +A
Sbjct: 121 TGGLMPDLTLLLDLPVHCGLERAGLRN--REEGTVLSEGRFDAESLEFHERVRQGYRSLA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +P+R  I+D+A   + V    L+ V   +++R
Sbjct: 179 AEEPERFAIIDAAQPPEDVVLQCLSAVEASLRQR 212


>gi|226226593|ref|YP_002760699.1| thymidylate kinase [Gemmatimonas aurantiaca T-27]
 gi|226089784|dbj|BAH38229.1| thymidylate kinase [Gemmatimonas aurantiaca T-27]
          Length = 237

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 7/186 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+  EG EG GKTT  + L   L+   ++V   REPGGT A +A R +LL        
Sbjct: 14  GLFVVLEGGEGVGKTTQWNRLASALRAVGHEVVAVREPGGTQAGDAIRTLLLDP-TSSLS 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA+R   V +V+ PAL  G ++L DRFL S+YAYQG         L S+  +
Sbjct: 73  PGTEALLFAASRAQLVADVVEPALARGAVVLVDRFLLSTYAYQGAGRGLPLDMLSSVNRL 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD T++L++P+D+ + RVQ R         D  E +D   H + +  F+    +
Sbjct: 133 ATGGRAPDLTLLLNVPLDLAMARVQAR------GAADRMELEDAAFHVRVQAAFVAALSS 186

Query: 184 QPDRCH 189
              + H
Sbjct: 187 TWQQAH 192


>gi|302388610|ref|YP_003824431.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
 gi|302199238|gb|ADL06808.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
          Length = 211

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 16/209 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+ EG +GAGKTT    + ++L+ K   V  TREPGGT   E  R VLL    D
Sbjct: 5   LRKGKFITIEGPDGAGKTTQAEKIVQYLKSKGKRVISTREPGGTALGEQLRKVLL----D 60

Query: 61  EFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             G+    AEA+++AA R   +E ++ PAL EG  ++CDRF+DSS AYQG         +
Sbjct: 61  PEGSPVSNAEALIYAACRAQLLERMVIPALREGFTVVCDRFVDSSLAYQGWARGIGINRI 120

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             L +  +    PD TI+LD+   + L R V  R    ES  L++        H+K R+ 
Sbjct: 121 LQLNKWVIGSYWPDITILLDVDPAVSLGRLVGGRKDRLESEALEF--------HQKVREG 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNIL 205
           ++ +    PDR  I+D++     V   I+
Sbjct: 173 YMKVREMFPDRIRIIDASQPADEVFRQIV 201


>gi|302336221|ref|YP_003801428.1| thymidylate kinase [Olsenella uli DSM 7084]
 gi|301320061|gb|ADK68548.1| thymidylate kinase [Olsenella uli DSM 7084]
          Length = 231

 Score =  115 bits (288), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 7/210 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ++ EGI+G GK+T  +LL   L+   ++V   REPGGT  +E  R +LL    DE  
Sbjct: 29  GRLVTLEGIDGCGKSTQAALLADHLEASGHEVVCLREPGGTAVSEKIRQLLLDPVNDEMA 88

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E +++ A+R   V  VI PAL  G +++CDR+ DS+YAYQ          ++   E+
Sbjct: 89  DECELLLYEASRAQLVRQVIEPALERGAVVVCDRYFDSTYAYQHGGRGLDRTLVERCNEL 148

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                 PD T++ DL   +   R             D  E   +   E+ R  +LD+A  
Sbjct: 149 GSCGRRPDVTLVFDLDPTVAFARATQ-------GGRDRLEGAGLRFQERVRASYLDLAAK 201

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +P R  ++D+  S   V    L ++ ++++
Sbjct: 202 EPARVRVIDATGSADEVGRRALLVLADVLR 231


>gi|307544593|ref|YP_003897072.1| thymidylate kinase [Halomonas elongata DSM 2581]
 gi|307216617|emb|CBV41887.1| thymidylate kinase [Halomonas elongata DSM 2581]
          Length = 217

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 2/206 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62
           G FI+ EG EG GK+T+++L+   L+ +  +V  TREPGGTP AEA R +LL    DE  
Sbjct: 5   GRFITLEGGEGVGKSTNLALVADHLEARGLEVVRTREPGGTPRAEAIRKLLLDPAADEPL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR  H+  V+RPAL  G  ++CDRF D+++AYQG         +  L+ 
Sbjct: 65  DDDAELLLVFAARAQHLARVVRPALERGAWVVCDRFTDATFAYQGGGRGIDTARIAELEA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              + + PD T++LD+P+    +R++ R   R+    D FER+     +  R+ +L+ A 
Sbjct: 125 FVQRGLTPDLTLLLDMPMAAAQRRLEGRLD-RDGGQRDRFERERAEFFDAVRRAYLERAD 183

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P+R ++V++     +V   + +++
Sbjct: 184 EAPERVYVVNADQPLDAVQDELKSLL 209


>gi|293399977|ref|ZP_06644123.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306377|gb|EFE47620.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 211

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+FEG +G+GKTT   +    L    Y V  TREPGG   AE  RHV+L     
Sbjct: 2   MKKGLFITFEGNDGSGKTTISKMAYEKLLDMGYPVVYTREPGGIDIAEQIRHVILDPKNT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA+++AA+R  H+   + PAL + +I+LCDRF+DSS  YQG         +  +
Sbjct: 62  AMDARCEALLYAASRRQHLVEKVLPALAKHQIVLCDRFVDSSLVYQGIARGIGIEEVYKI 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++  +PD TI L + +  GL R++ R         D  + + +  H+   + +  I
Sbjct: 122 NEFAIEGHLPDATIFLHVDLHTGLSRIETR------GEKDRLDNESMKFHQMVSEGYDTI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                +R H++D+  S + V    +  + E++ 
Sbjct: 176 REMFHERMHVIDATKSIEDVLKATIECLLEIIN 208


>gi|148270766|ref|YP_001245226.1| dTMP kinase [Thermotoga petrophila RKU-1]
 gi|166223125|sp|A5IN77|KTHY_THEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147736310|gb|ABQ47650.1| thymidylate kinase [Thermotoga petrophila RKU-1]
          Length = 197

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL R+L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R + +   I+  L EG ++L DR+ DSS AYQG   +     ++ L + +
Sbjct: 58  KAELFLFLASR-NLLVMEIKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  L R            L+ FE+++ +  E+ R+ +L +A+  
Sbjct: 117 TDSLVPDLTFYIDVDVETALNR---------KGELNRFEKREFL--ERVREGYLVLAKEH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211
           P+R  ++D   S + +  +++  V   W+L
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVERRWKL 195


>gi|148827653|ref|YP_001292406.1| thymidylate kinase [Haemophilus influenzae PittGG]
 gi|254808296|sp|A5UGW7|KTHY_HAEIG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148718895|gb|ABR00023.1| thymidylate kinase [Haemophilus influenzae PittGG]
          Length = 210

 Score =  115 bits (288), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++ P +  ++++  S + V  +I
Sbjct: 176 KDNP-KAVMINAEQSIELVQADI 197


>gi|297159269|gb|ADI08981.1| putative thymidylate kinase [Streptomyces bingchenggensis BCW-1]
          Length = 1080

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 11/217 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI  EG +GAGKTT +  L  +++ K ++V VTREPG T   +  R +LL       
Sbjct: 499 TGFFIVVEGGDGAGKTTQVEALAEWIRGKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 558

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 559 SHRAEALLYAADRAEHVDSVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 618

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 619 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHQRVRNGFLTLAA 670

Query: 183 NQPDRCHIVDSAH---SFQSVATNILNIVWELVQKRV 216
             P R  +VD+     +  +V  + L++V  L +  V
Sbjct: 671 ADPARYLVVDAGQLPEAVTAVVRHRLDLVLPLSEAEV 707


>gi|260584572|ref|ZP_05852318.1| dTMP kinase [Granulicatella elegans ATCC 700633]
 gi|260157595|gb|EEW92665.1| dTMP kinase [Granulicatella elegans ATCC 700633]
          Length = 211

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 4/199 (2%)

Query: 9   FEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
            EG +GAGKTT I  L   L+ R N  +  TREPGG+  AE  R ++L     E     E
Sbjct: 1   MEGPDGAGKTTVIEKLIPLLEERTNVTITSTREPGGSRIAEDIRQIILDVQNVEMDVRTE 60

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           AI++AAAR  H+ + I P L +G I+ CDRF+DSS  YQG         +  L + +   
Sbjct: 61  AILYAAARRQHLTDRILPNLEKGGIVFCDRFVDSSLVYQGVARGIGIEEVYQLNQFATAG 120

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
             PD T+ LD+P +IGL+R+      R+    D  +++ +  H+  RQ +LDI    P+R
Sbjct: 121 KTPDVTLYLDVPAEIGLERIHLAKGNRQ---FDRLDQEGLQFHKMVRQGYLDIIPTDPER 177

Query: 188 CHIVDSAHSFQSVATNILN 206
              +D+  +   V    L 
Sbjct: 178 FIQIDATKTVDEVVQECLT 196


>gi|319399639|gb|EFV87893.1| thymidylate kinase [Staphylococcus epidermidis FRI909]
          Length = 203

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 12/197 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           FI+FEG EGAGKT   S++K   +R  K YD+  TREPGG   +E  R ++L    +   
Sbjct: 4   FITFEGPEGAGKT---SVIKEVSERLAKEYDIVTTREPGGVLTSEEIRRIVLDG--ESID 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA+R +H+   I P+L   KI+LCDR++DSS AYQG         +  L E 
Sbjct: 59  IRTEAMLFAASRREHLVEKIIPSLQADKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEF 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD TI LD+  +IG +R+     L+ +   +  +++D + HEK  + +  +  +
Sbjct: 119 AINGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISD 173

Query: 184 QPDRCHIVDSAHSFQSV 200
            P R   V++ HS   V
Sbjct: 174 NPHRFIKVNANHSLDKV 190


>gi|309972387|gb|ADO95588.1| Thymidylate kinase [Haemophilus influenzae R2846]
          Length = 219

 Score =  115 bits (287), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++ P +  ++++  S + V  +I
Sbjct: 185 KDNP-KAVMINAEQSIELVQADI 206


>gi|300691472|ref|YP_003752467.1| thymidylate kinase [Ralstonia solanacearum PSI07]
 gi|299078532|emb|CBJ51187.1| thymidylate kinase [Ralstonia solanacearum PSI07]
          Length = 205

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 13/198 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  +I   R      L ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHS 196
             A  +P+R  I+D+A +
Sbjct: 173 RRAAAEPERFVIIDAARA 190


>gi|148825264|ref|YP_001290017.1| thymidylate kinase [Haemophilus influenzae PittEE]
 gi|229846542|ref|ZP_04466650.1| thymidylate kinase [Haemophilus influenzae 7P49H1]
 gi|254808295|sp|A5UA33|KTHY_HAEIE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148715424|gb|ABQ97634.1| thymidylate kinase [Haemophilus influenzae PittEE]
 gi|229810635|gb|EEP46353.1| thymidylate kinase [Haemophilus influenzae 7P49H1]
          Length = 210

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++ P +  ++++  S + V  +I
Sbjct: 176 KDNP-KAVMINAEQSIELVQADI 197


>gi|145630365|ref|ZP_01786146.1| thymidylate kinase [Haemophilus influenzae R3021]
 gi|144984100|gb|EDJ91537.1| thymidylate kinase [Haemophilus influenzae R3021]
          Length = 219

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 12  GKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEPV 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 72  TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + +
Sbjct: 132 TVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRASYLALVK 185

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 186 DNP-KAVMINAEQSIELVQADIESAV 210


>gi|154249383|ref|YP_001410208.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1]
 gi|171769338|sp|A7HKW8|KTHY_FERNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|154153319|gb|ABS60551.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1]
          Length = 197

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 11/203 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+SFEGI+G GK+T ++LL  +L+ K       REPGGT   E  R +L++    E  A
Sbjct: 1   MFVSFEGIDGCGKSTQVNLLVNYLEEKGIPYIKVREPGGTHLGEKIRELLIT---QEMCA 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE+VI+PAL  GKI++ DRF  SS AYQG         +  L + +
Sbjct: 58  RSELLLFLASRAQLVESVIKPALKNGKIVIADRFAHSSVAYQGCGRELGPETVKILNDFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             +  PD    +D+PV++ ++R++N++        D  E++     E  R  +L +A+  
Sbjct: 118 TDKTYPDIVFYIDVPVNVAMERMKNQHK-------DRIEKEGKEFWESIRNCYLKMAKEN 170

Query: 185 PDRCHIVDSAHSFQSVATNILNI 207
            +   I+D   + + +   I+ +
Sbjct: 171 ENFV-IIDGTRTIEEIHREIVKV 192


>gi|304321770|ref|YP_003855413.1| thymidylate kinase [Parvularcula bermudensis HTCC2503]
 gi|303300672|gb|ADM10271.1| thymidylate kinase [Parvularcula bermudensis HTCC2503]
          Length = 209

 Score =  115 bits (287), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 11/205 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I+LL   L+     V +TREPGGTP  EA R VLL+     + 
Sbjct: 5   GRFITFEGPEGAGKSTQIALLAERLRSAGEAVTMTREPGGTPGGEALRDVLLNPAAT-WS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++  AAR  H++ +I PAL  G+ +LCDRF  S+ AYQG+  + + L   +  E 
Sbjct: 64  PLAEALLMNAARDAHMQTLILPALQRGETVLCDRFAASTLAYQGDGVAPETL---AALEA 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V    PD  ++LDLPV  GL R + R +       D FE + +  HE  R  FL++A  
Sbjct: 121 AVVVRRPDLVLLLDLPVAEGLARAKARST------ADRFEGRRLDYHEGVRARFLELAAK 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+  H +D+A     V+  IL ++
Sbjct: 175 DPN-MHCIDAAQPQDDVSAAILEVM 198


>gi|261822056|ref|YP_003260162.1| thymidylate kinase [Pectobacterium wasabiae WPP163]
 gi|261606069|gb|ACX88555.1| thymidylate kinase [Pectobacterium wasabiae WPP163]
          Length = 219

 Score =  114 bits (286), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT  +++   L+     +V  TREPGGTP AE  R ++     
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMA 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R       R+   LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRA------RQRGELDRIEQESLAFFDRTRFRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A  + D    +D+A S  +V+ +I   + + +Q++
Sbjct: 174 ELA-AEDDSILTIDAAQSIDAVSADIQAALQQWLQRQ 209


>gi|281413072|ref|YP_003347151.1| thymidylate kinase [Thermotoga naphthophila RKU-10]
 gi|281374175|gb|ADA67737.1| thymidylate kinase [Thermotoga naphthophila RKU-10]
          Length = 197

 Score =  114 bits (286), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL R+L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R + +   I+  L EG ++L DR+ DSS AYQG   +     ++ L + +
Sbjct: 58  KAELFLFLASR-NLLVMEIKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  L R            L+ FE+++ +  E+ R+ +L +A+  
Sbjct: 117 TDGLVPDLTFYIDVDVETALNR---------KGELNRFEKREFL--ERVREGYLVLAKEH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211
           P+R  ++D   S + +  +++  V   W+L
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVERRWKL 195


>gi|326328861|ref|ZP_08195195.1| dTMP kinase [Nocardioidaceae bacterium Broad-1]
 gi|325953346|gb|EGD45352.1| dTMP kinase [Nocardioidaceae bacterium Broad-1]
          Length = 216

 Score =  114 bits (286), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 9/214 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F+ FEG EG+GK+T   LL   L  + + V +T EPG T   +  R ++LS    +  
Sbjct: 11  GVFVCFEGGEGSGKSTQSRLLHEALTARGHRVLLTFEPGDTAVGKDVRRIVLSPETGDLD 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA + +H+E+++RPAL  G++++ DR++DS  AYQG         L+ +   
Sbjct: 71  DRTEALLFAADKAEHIESMVRPALERGEVVITDRYVDSMLAYQGAGRVLDAAQLEEVARW 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ P  T++LDL    G  R + R         D  E++    HE+ R  F+ +A  
Sbjct: 131 ATADLRPHLTVLLDLDPTAGFTRFEER---------DRMEQESQQFHERVRSAFVALAER 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            PD   ++D+    + +   +L  +  L+ + V+
Sbjct: 182 NPDHYLVLDARAPVEEIHAAVLARLEPLLDQAVT 215


>gi|56808246|ref|ZP_00366017.1| COG0125: Thymidylate kinase [Streptococcus pyogenes M49 591]
 gi|209558885|ref|YP_002285357.1| thymidylate kinase [Streptococcus pyogenes NZ131]
 gi|229621844|sp|B5XK00|KTHY_STRPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|209540086|gb|ACI60662.1| Thymidylate kinase [Streptococcus pyogenes NZ131]
          Length = 211

 Score =  114 bits (286), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLTKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREINRLDL---ETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|312796386|ref|YP_004029308.1| Thymidylate kinase [Burkholderia rhizoxinica HKI 454]
 gi|312168161|emb|CBW75164.1| Thymidylate kinase (EC 2.7.4.9) [Burkholderia rhizoxinica HKI 454]
          Length = 218

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 108/215 (50%), Gaps = 19/215 (8%)

Query: 4   GLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           G FI+FEGI+GAGKTTH++     L     R+   V VTREPGGTP  EA R +LL    
Sbjct: 16  GKFITFEGIDGAGKTTHLTWFCDRLSERAARQGASVIVTREPGGTPLGEALRDILLR--- 72

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                E EA++  AAR +H+  VI P L  G  +L DRF D+++AYQG     + L +D 
Sbjct: 73  QPMHLETEALLMFAARREHIAAVIEPTLARGDWVLSDRFTDATFAYQG---GGRGLSIDK 129

Query: 120 LQ--EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  E  VQ  + PD T++ D+P +    R   R   R     D FE +      + R  
Sbjct: 130 LQVLEQWVQAGLQPDRTVLFDVPTETASAR---RGGARAP---DKFESESDAFFARTRAE 183

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L      P R  IVD+  S   V   +  I+  L
Sbjct: 184 YLRRTAQAPARFAIVDATCSIAEVREQLEAILLTL 218


>gi|187928511|ref|YP_001898998.1| thymidylate kinase [Ralstonia pickettii 12J]
 gi|229470189|sp|B2UBZ3|KTHY_RALPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187725401|gb|ACD26566.1| dTMP kinase [Ralstonia pickettii 12J]
          Length = 205

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 13/210 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + LQ K       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L+    Q + P  TI+ DL  +I   R      L ++   D FE +      + R  +L
Sbjct: 119 ALEHWVQQGLQPTKTILFDLAPEIAAAR------LADARTPDKFEAESAQFFLRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             A  +PDR  ++++      +  ++ N++
Sbjct: 173 RRAAAEPDRFVVLNANRERSDIQKDLENLL 202


>gi|315229969|ref|YP_004070405.1| thymidylate kinase [Thermococcus barophilus MP]
 gi|315182997|gb|ADT83182.1| thymidylate kinase [Thermococcus barophilus MP]
          Length = 209

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 18/211 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+FI  EGI+GAGK+T   LL ++ +++ Y+V +T+EP  T   +  R ++L+ G +   
Sbjct: 2   GIFIVIEGIDGAGKSTQAKLLAKWFEKRGYNVVLTKEPTDTAFGKLIRKLVLTGGREGII 61

Query: 61  ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              +   EAEA++FAA R +HV+ +I P+L  GK+++ DR+  SS AYQ  R     L L
Sbjct: 62  DGAKISHEAEALLFAADRAEHVKKLIEPSLRTGKVVISDRYFYSSLAYQWARG----LDL 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L  ++   + PD  I+LDLPV   +KR+  R    E      F+R    + +K R+ +
Sbjct: 118 EWLINLNKFAIRPDLVILLDLPVKESMKRINGRQLKSE------FDR-IAELQKKVRENY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L +    P+   IV++  S + +  +I+ +V
Sbjct: 171 LKLVEMFPE-MKIVNALASIEDIHNDIVALV 200


>gi|319787591|ref|YP_004147066.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466103|gb|ADV27835.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1]
          Length = 223

 Score =  114 bits (286), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 12/217 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------V 59
            +S EG EGAGK+T ++ ++  L  + ++V  TREPGGTP AE  R +LL+         
Sbjct: 11  LVSLEGGEGAGKSTALAAVRELLAARGHEVVQTREPGGTPLAERIRELLLARSAPGQDVA 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    + E ++  AAR  HV  V+RPAL  G  ++ DRF DSSYAYQG        ++  
Sbjct: 71  EPLHPQTELLLMFAARAQHVAEVVRPALERGAFVVSDRFTDSSYAYQGAGRGLDPRWIAD 130

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L++ +V  + P  T++LDL V  G  R   R         D  E +     E+ R+ F  
Sbjct: 131 LEQRTVG-MRPGLTLLLDLDVRQGRARTSGR-----DLFPDRIESEQDEFFERVRRGFRQ 184

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            A+ +P+R  ++D+A   Q+V  ++   V   + ++V
Sbjct: 185 RAQAEPERFALIDAAQPPQAVGHDVAAAVAAWLDRQV 221


>gi|194334267|ref|YP_002016127.1| dTMP kinase [Prosthecochloris aestuarii DSM 271]
 gi|238693337|sp|B4S8U3|KTHY_PROA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|194312085|gb|ACF46480.1| dTMP kinase [Prosthecochloris aestuarii DSM 271]
          Length = 223

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 8/218 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+GAGK+T + +L++ L  K  +V   REPGGT  +E+ R +LL    D    
Sbjct: 1   MFITFEGIDGAGKSTQVKMLRKLLISKGLEVLTLREPGGTDISESIRDILLEVKND-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++FAA+R + V+ VI+PAL +   +L DRF DS+ AYQG         L  +  I+
Sbjct: 60  IGELLLFAASRAELVQKVIKPALSDHATVLLDRFYDSTSAYQGYGRGLDLALLHQINRIA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LDL  +  + R  +  SL    E   LD  ER  +  + + R  +  IA
Sbjct: 120 SCSLEPDITFYLDLSPEDAMIRKFSEKSLPLAFEDEELDRMERSGLEFYTRVRNGYQTIA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW----ELVQKR 215
            +QP R   +D+     ++   I   +      L+QK+
Sbjct: 180 ASQPRRVVTIDATLEPDAIHRKITETIMSRRGSLLQKK 217


>gi|300723625|ref|YP_003712930.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061]
 gi|297630147|emb|CBJ90784.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061]
          Length = 209

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 119/220 (54%), Gaps = 16/220 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT I  +   L++    D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTAIQTVAETLKQYGISDLIFTREPGGTPLAEKLRQ-LIKQGI 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +      +AE ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         +
Sbjct: 59  EGERLTDKAEVLMIYAARVQLVENVIKPALSKGTWVVGDRHDLSSQAYQGGGRGIDQNLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQ 175
            SL++ ++    PD TI LDLP ++GL+R + R  L   E   LD+F       H  R +
Sbjct: 119 ASLRDSALGCFYPDLTIYLDLPPEVGLERARERGELDRIEKESLDFF-------HRTRAR 171

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               +A N  D    +D+  S + V  +I + + + +Q++
Sbjct: 172 YLELVAAN--DSIKKIDATQSLEKVRADIRHTLLQWLQEQ 209


>gi|227495669|ref|ZP_03925985.1| thymidylate kinase [Actinomyces coleocanis DSM 15436]
 gi|226830901|gb|EEH63284.1| thymidylate kinase [Actinomyces coleocanis DSM 15436]
          Length = 243

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 122/219 (55%), Gaps = 15/219 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL+I+FEG E  GKTT I L + +L+   Y + V+REPGGT   +  R+++L  G  +  
Sbjct: 21  GLYITFEGGEACGKTTQIELTQNWLRDLGYQLTVSREPGGTELGQQLRNLILH-GPKDID 79

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++ A R  HV   IRPAL  G++++ DR+ DS+ AYQG   +++ L +  ++++
Sbjct: 80  PRCEVLLYLADRAYHVATKIRPALEAGQVVVQDRYFDSAVAYQG---AARKLGVSEVRDL 136

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V+ ++P+ T +LD+   + ++        R +   D  E +    H K R+ +L +
Sbjct: 137 NLWAVEGLIPEITFLLDIDPRVSMQ--------RRAGATDRIEEEPSAFHIKVREQYLAL 188

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           A  +P R H+++++ S + +   I  ++   ++K+   L
Sbjct: 189 AAAEPQRFHVLNASDSIEELQAQIREVLLGALEKKTGLL 227


>gi|145632722|ref|ZP_01788456.1| thymidylate kinase [Haemophilus influenzae 3655]
 gi|145634547|ref|ZP_01790256.1| thymidylate kinase [Haemophilus influenzae PittAA]
 gi|229844384|ref|ZP_04464524.1| thymidylate kinase [Haemophilus influenzae 6P18H1]
 gi|144986917|gb|EDJ93469.1| thymidylate kinase [Haemophilus influenzae 3655]
 gi|145268092|gb|EDK08087.1| thymidylate kinase [Haemophilus influenzae PittAA]
 gi|229812633|gb|EEP48322.1| thymidylate kinase [Haemophilus influenzae 6P18H1]
          Length = 210

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+N+I+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++ P +  ++++  S + V  +I
Sbjct: 176 KDNP-KAVMINAEQSIELVQADI 197


>gi|170703706|ref|ZP_02894432.1| dTMP kinase [Burkholderia ambifaria IOP40-10]
 gi|171319768|ref|ZP_02908855.1| dTMP kinase [Burkholderia ambifaria MEX-5]
 gi|170131388|gb|EDS99989.1| dTMP kinase [Burkholderia ambifaria IOP40-10]
 gi|171095004|gb|EDT40029.1| dTMP kinase [Burkholderia ambifaria MEX-5]
          Length = 206

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAASGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVL 203


>gi|330446410|ref|ZP_08310062.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490601|dbj|GAA04559.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 209

 Score =  114 bits (285), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 9/200 (4%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           G FI  EG+EGAGK+T I+ ++    Q    D   TREPGGTP AE  R ++     DE 
Sbjct: 3   GKFIVIEGLEGAGKSTAINQVMDTLAQHGINDPVSTREPGGTPLAEQMRALVKEGHPDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG         +++L+
Sbjct: 63  LTDMAELLLLYAARIQLVDNVIKPALNQGKWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI +D+  ++GL+R + R        LD  E+ ++    + R  FL+++
Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRVRARFLELS 176

Query: 182 RNQPDRCHIVDSAHSFQSVA 201
            NQP+   I+D++ + + V 
Sbjct: 177 ENQPN-VIIIDASQTLEQVT 195


>gi|295397256|ref|ZP_06807352.1| thymidylate kinase [Aerococcus viridans ATCC 11563]
 gi|294974503|gb|EFG50234.1| thymidylate kinase [Aerococcus viridans ATCC 11563]
          Length = 219

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 4/207 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+ EG +GAGKTT I  L   L+ K    + +TREPGG P AE  R V+LS     
Sbjct: 7   AGKFITVEGPDGAGKTTLIQGLTAKLEEKLAVPLKLTREPGGDPIAEQIREVILSPENVA 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA+R  H+ + + PAL  G ++LCDRF+DSS AYQG         + ++ 
Sbjct: 67  LDPRAEALLYAASRRQHLVHTVLPALEAGHMVLCDRFVDSSIAYQGYGREIGEEGIIAIN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +     PD T+ LD+  + G++R+Q   S  E   LD    + +  H++  + +  + 
Sbjct: 127 QFATDGRQPDLTLYLDITAEEGIRRIQANRSQAEQNRLDV---EAIDFHQRVHKGYGVLK 183

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P+R  ++D+    +S+  + L I+
Sbjct: 184 DRFPERIQVIDATQDPESMQRDALAIL 210


>gi|115351881|ref|YP_773720.1| thymidylate kinase [Burkholderia ambifaria AMMD]
 gi|172060851|ref|YP_001808503.1| thymidylate kinase [Burkholderia ambifaria MC40-6]
 gi|122323022|sp|Q0BEN7|KTHY_BURCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487583|sp|B1YRL3|KTHY_BURA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|115281869|gb|ABI87386.1| thymidylate kinase [Burkholderia ambifaria AMMD]
 gi|171993368|gb|ACB64287.1| dTMP kinase [Burkholderia ambifaria MC40-6]
          Length = 206

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVL 203


>gi|254252184|ref|ZP_04945502.1| Thymidylate kinase [Burkholderia dolosa AUO158]
 gi|124894793|gb|EAY68673.1| Thymidylate kinase [Burkholderia dolosa AUO158]
          Length = 206

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 110/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH++     LQ+K       V VTREPGGT   E  R ++L+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLNWFCERLQQKLAAAGRHVVVTREPGGTQLGETLRDIVLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---APDKFESESDAFFARTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 172 YLRRAEEAPHRFVIVDATQSIAEIRQQLERVL 203


>gi|148651943|ref|YP_001279036.1| dTMP kinase [Psychrobacter sp. PRwf-1]
 gi|226732663|sp|A5WBP5|KTHY_PSYWF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148571027|gb|ABQ93086.1| thymidylate kinase [Psychrobacter sp. PRwf-1]
          Length = 208

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 6/169 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G F+SFEG EG GKTT I+ L   LQ +  +   TREPGG+P AE  R +LL     
Sbjct: 1   MSLGKFVSFEGTEGVGKTTAINGLCERLQAQGIEYVRTREPGGSPFAEQLRELLLDTRT- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119
           +   + E ++  AAR DH+  VI PAL  GK ++CDRF+DS+ AYQG  R       L  
Sbjct: 60  QINDDTELLLMFAARSDHLAQVIMPALSAGKWVICDRFIDSTVAYQGYGRGFGNADMLHK 119

Query: 120 LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           ++ +    V  +PD T+ LDLPV  G++R   R      E   LD+F+R
Sbjct: 120 IEALIAGFVPRLPDITLWLDLPVAEGMQRAGKRSVADRFEQQQLDFFDR 168


>gi|113461628|ref|YP_719697.1| thymidylate kinase [Haemophilus somnus 129PT]
 gi|123031486|sp|Q0I5J0|KTHY_HAES1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|112823671|gb|ABI25760.1| thymidylate kinase [Haemophilus somnus 129PT]
          Length = 210

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 124/221 (56%), Gaps = 16/221 (7%)

Query: 1   MNSGLFISFEGIEGAGKT-THISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EG+EGAGK+ TH  ++    +   ++V  TREPGGTP AE  R+ L+   V
Sbjct: 1   MKTGKFIVIEGLEGAGKSSTHQVVVNTLKEFGIHEVVFTREPGGTPLAEKLRY-LIKHEV 59

Query: 60  DEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117
           +E   A+AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQ G R   QHL +
Sbjct: 60  EELVTAKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDLSSQAYQGGGRGLDQHL-M 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQ 175
            +L+   + +  PD T+ LD+  +IGL RV+ R  L   E   LD+F R         R 
Sbjct: 119 TTLKNAVLGDFKPDFTLYLDIEPEIGLARVRGRGELDRIEQQNLDFFHRT--------RA 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +L + +  P+   ++++    + V  +I   V + +++ V
Sbjct: 171 RYLQLVQQDPNAV-LINADQPIELVQQDIRKAVQKFIEENV 210


>gi|309800190|ref|ZP_07694374.1| thymidylate kinase [Streptococcus infantis SK1302]
 gi|308116178|gb|EFO53670.1| thymidylate kinase [Streptococcus infantis SK1302]
          Length = 212

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  +   L+ +  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEAIIPILEDRGIEVLSTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  EMDPKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDKKAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H K RQ +L +
Sbjct: 121 NEFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREINRLDM---EGLDLHRKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + DR   +D++     V  N   ++++
Sbjct: 177 LEKEADRIVKIDASLPLDQVIANTQQLLFD 206


>gi|327334819|gb|EGE76530.1| dTMP kinase [Propionibacterium acnes HL097PA1]
          Length = 214

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDGVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|193216174|ref|YP_001997373.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110]
 gi|193089651|gb|ACF14926.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110]
          Length = 226

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 115/207 (55%), Gaps = 6/207 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+FEGI+G+GK+T I LLK FLQ + ++V   REPGG P AE  R +LL    +E  
Sbjct: 7   GFLITFEGIDGSGKSTQIKLLKDFLQSRGFEVLSLREPGGVPVAEQIRAILLE-NKNEIN 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++F+A+R   V+ VI PAL + ++++ DRF DS+ AYQG         +  + EI
Sbjct: 66  PIAELLLFSASRAALVQAVIIPALEQRQVVVLDRFYDSTVAYQGYGRGISLERIHQINEI 125

Query: 124 SVQEVMPDCTIILDL-PVDIGLKRVQNR---YSLRESAC-LDYFERKDVMIHEKRRQIFL 178
           +   ++P+ T   DL P D  L++   +    S +++   LD  ER  +   ++ R  + 
Sbjct: 126 ASFGLLPNLTFYFDLQPEDALLRKFSEKSLPLSFKDNEIPLDRMERAGLEFFQRVRTGYK 185

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNIL 205
           ++ +  P+R + +D+  S   +   ++
Sbjct: 186 ELVQTAPERFYEIDALCSISEIHQKVV 212


>gi|294155947|ref|YP_003560331.1| dTMP kinase [Mycoplasma crocodyli MP145]
 gi|291600094|gb|ADE19590.1| dTMP kinase [Mycoplasma crocodyli MP145]
          Length = 220

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 13/212 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAAR--HVLLSCGVD 60
           +FI+FEG++G+GKTT I  +   L +K  ++   +TREPGG    EA R   ++L     
Sbjct: 1   MFITFEGLDGSGKTTVIEKVTELLHKKFPELKYILTREPGGKDIVEAERIREIILDKS-S 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++++A+R  H+E+VI P+L E K++LCDRF+DS YAYQG        F  SL
Sbjct: 60  KISPVTEALLYSASRRIHLEHVIWPSLKEKKLVLCDRFIDSFYAYQGYARELGIDFATSL 119

Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            E+ +   +PD TI  D+ P D   +R+ NR         D  + +  + H K    +L 
Sbjct: 120 TELIIDNTIPDLTIFFDINPADSKKRRLANR------LVHDRMDDETEIFHNKVYDGYLK 173

Query: 180 IA-RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           I  +++ +R  IVD++ SF  V   ++  + E
Sbjct: 174 IIDKDKNNRFIIVDASKSFDEVVEQVIQKLME 205


>gi|306827929|ref|ZP_07461196.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782]
 gi|304429848|gb|EFM32890.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782]
          Length = 232

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 22  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 81

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 82  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 197

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230


>gi|269955162|ref|YP_003324951.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894]
 gi|269303843|gb|ACZ29393.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894]
          Length = 281

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 111/209 (53%), Gaps = 13/209 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F+SFEG +G GKTT   LL  +L      +V VTREPGGT      R ++L    ++ 
Sbjct: 5   GYFVSFEGGDGGGKTTQARLLGDWLGTALGREVVVTREPGGTALGATLRQLILHG--EDM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
               EA+++AA R  HV +++RPAL  G +++ DR+LDSS AYQ G R+ S+    D L 
Sbjct: 63  DPRTEALLYAADRAHHVASLVRPALERGAVVITDRYLDSSVAYQSGGRELSEQEVED-LS 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +V+ ++PD TI+LD  VD+           R S  LD  ER D    ++ R  +   A
Sbjct: 122 LWAVRGLLPDVTILLD--VDLATS------GARMSGDLDRLERVDDAFRQRTRDAYHRRA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R  +VD+A + + V   +   V E
Sbjct: 174 AADPARWVVVDAAGTVEEVHAQVRAAVAE 202


>gi|283779876|ref|YP_003370631.1| thymidylate kinase [Pirellula staleyi DSM 6068]
 gi|283438329|gb|ADB16771.1| thymidylate kinase [Pirellula staleyi DSM 6068]
          Length = 207

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 8/194 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+SF+G++GAGK+T I LL  +L  ++ +V V R+PGGTP  E  R +LL         
Sbjct: 1   MFLSFDGVDGAGKSTQIRLLAEWLAARSLEVVVCRDPGGTPLGEKLRSILLDDHETPIHR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE VIRPAL  GK+++ DRFL ++  YQ          + ++ +++
Sbjct: 61  RSEMLLFMASRAQLVEEVIRPALEAGKVVISDRFLLATAVYQAHAGGLVADDVWTVGKVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           V  +MP   ++LD+P     KR+   +   ES  L Y ER         RQ FL  A   
Sbjct: 121 VGGMMPARVLLLDMPAAEASKRIARAHDRMESQGLAYLERV--------RQGFLLEAERD 172

Query: 185 PDRCHIVDSAHSFQ 198
           P     +D+A   Q
Sbjct: 173 PQTIRAIDAARDPQ 186


>gi|225871114|ref|YP_002747061.1| thymidylate kinase [Streptococcus equi subsp. equi 4047]
 gi|254808305|sp|C0M7M5|KTHY_STRE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225700518|emb|CAW94978.1| thymidylate kinase [Streptococcus equi subsp. equi 4047]
          Length = 211

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 5/206 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+FEG +GAGKTT +  L   LQ      +  TREPGG   AE  R ++L    
Sbjct: 1   MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I PAL  G ++L DRF+DSS AYQG         +  
Sbjct: 61  TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   V PD T+  D+P ++GL R+      RE   LD  E+ D  +H++ R+ +L+
Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE-REINRLD-LEQLD--LHQRVRKGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
           +A   P R   +D++   +SV +  L
Sbjct: 177 LALENPQRIVKIDASQDLESVVSAAL 202


>gi|55820572|ref|YP_139014.1| thymidylate kinase [Streptococcus thermophilus LMG 18311]
 gi|55822462|ref|YP_140903.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066]
 gi|116627381|ref|YP_820000.1| thymidylate kinase [Streptococcus thermophilus LMD-9]
 gi|81559719|sp|Q5M0Z9|KTHY_STRT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|81560889|sp|Q5M5I6|KTHY_STRT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122268018|sp|Q03LW8|KTHY_STRTD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|55736557|gb|AAV60199.1| thymidylate kinase [Streptococcus thermophilus LMG 18311]
 gi|55738447|gb|AAV62088.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066]
 gi|116100658|gb|ABJ65804.1| thymidylate kinase [Streptococcus thermophilus LMD-9]
          Length = 209

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 9/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKT+ +  LL R  +     V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L  G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GL R+      RE   LD  E+ D  +H++ RQ +LD
Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE-REVNRLD-LEKLD--MHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A  +P+R   +D++ + + V  +     WE+++
Sbjct: 177 LAEAEPERIKRIDASQTLEEVVED----TWEIIK 206


>gi|299066795|emb|CBJ37989.1| thymidylate kinase [Ralstonia solanacearum CMR15]
          Length = 205

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 13/198 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  ++   R      L ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHS 196
             A  +P R  IVD+A +
Sbjct: 173 RRAAAEPGRFVIVDAARA 190


>gi|195978711|ref|YP_002123955.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975416|gb|ACG62942.1| thymidylate kinase Tmk [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 232

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 5/206 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+FEG +GAGKTT +  L   LQ      +  TREPGG   AE  R ++L    
Sbjct: 22  MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 81

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I PAL  G ++L DRF+DSS AYQG         +  
Sbjct: 82  TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 141

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   V PD T+  D+P ++GL R+      RE   LD  E+ D  +H++ R+ +L+
Sbjct: 142 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE-REINRLD-LEQLD--LHQRVRKGYLE 197

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
           +A   P R   +D++   +SV +  L
Sbjct: 198 LALENPQRIVKIDASQDLESVVSAAL 223


>gi|312277894|gb|ADQ62551.1| Thymidylate kinase [Streptococcus thermophilus ND03]
          Length = 209

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 9/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKT+ +  LL R  +     V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L  G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GL R+      RE   LD  E+ D  +H++ RQ +LD
Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE-REVNRLD-LEKID--MHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A  +P+R   +D++ + + V  +     WE+++
Sbjct: 177 LAEAEPERIKRIDASQTLEEVVED----TWEIIK 206


>gi|110598215|ref|ZP_01386491.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031]
 gi|110340130|gb|EAT58629.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031]
          Length = 212

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 4/212 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L  +L     +V   REPGGT  AE  R +LL     E   
Sbjct: 1   MLITFEGIDGAGKSTQIKKLVSYLADSGREVLTLREPGGTEVAEKIRLILLESR-HEISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + +  VI+PAL E KI++ DRF DS+ AYQG         L S+  IS
Sbjct: 60  VGELLLFSASRAELIHEVIKPALAENKIVILDRFFDSTTAYQGYGRGIDLELLRSIIAIS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  S+    +S+ LD  ER  +  ++  RQ +L+I 
Sbjct: 120 TCGITPDITFYLDIKPEEALSRKFSAKSIPLAFDSSELDRMERSGLQFYQNVRQGYLNIL 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +    R   +++    + +   I+ ++ E +Q
Sbjct: 180 KESNGRMFCLNALEKPEEIHRRIIALLHERLQ 211


>gi|282882208|ref|ZP_06290847.1| dTMP kinase [Peptoniphilus lacrimalis 315-B]
 gi|281297973|gb|EFA90430.1| dTMP kinase [Peptoniphilus lacrimalis 315-B]
          Length = 202

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 11/204 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG +G GK+T  +L+   L ++N +V  TREPGGT  +EA R ++L+    E   
Sbjct: 3   LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYKEMDY 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I+PAL  GK++LC+RF+ SS AYQG   +     + ++ E +
Sbjct: 63  RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   I     +  L++++N          D  ER     H K R  + ++ +  
Sbjct: 123 TMGLEPDIVFIFLNKEETLLRKLEN---------ADRLERAGDDFHNKVRDFYKNLQK-- 171

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            D  + +D+  S   V ++ L ++
Sbjct: 172 KDNYYFIDAWQSIDKVFSDTLEVL 195


>gi|50841735|ref|YP_054962.1| putative thymidylate kinase [Propionibacterium acnes KPA171202]
 gi|50839337|gb|AAT82004.1| putative thymidylate kinase [Propionibacterium acnes KPA171202]
          Length = 228

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 26  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 85

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 86  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 145

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 146 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 196

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 197 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 228


>gi|15674539|ref|NP_268713.1| thymidylate kinase [Streptococcus pyogenes M1 GAS]
 gi|71910144|ref|YP_281694.1| thymidylate kinase [Streptococcus pyogenes MGAS5005]
 gi|23821808|sp|Q9A190|KTHY_STRP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|13621644|gb|AAK33434.1| putative thymidylate kinase [Streptococcus pyogenes M1 GAS]
 gi|71852926|gb|AAZ50949.1| thymidylate kinase [Streptococcus pyogenes MGAS5005]
          Length = 211

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|322388016|ref|ZP_08061623.1| thymidylate kinase [Streptococcus infantis ATCC 700779]
 gi|321141289|gb|EFX36787.1| thymidylate kinase [Streptococcus infantis ATCC 700779]
          Length = 212

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  +   L+ KN +   TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALATGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL+R+    S RE   LD    + + +H K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAAN-SDREVNRLDL---EGLDLHRKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++     V  N   ++++
Sbjct: 177 LEKEGERIVKIDASLPLNQVVENTKQVLFD 206


>gi|94989835|ref|YP_597935.1| thymidylate kinase [Streptococcus pyogenes MGAS10270]
 gi|94543343|gb|ABF33391.1| Thymidylate kinase [Streptococcus pyogenes MGAS10270]
          Length = 253

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|261346039|ref|ZP_05973683.1| dTMP kinase [Providencia rustigianii DSM 4541]
 gi|282565926|gb|EFB71461.1| dTMP kinase [Providencia rustigianii DSM 4541]
          Length = 208

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 13/213 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV--DEF 62
           FI  EG+EGAGKTT I+ +   L+    +  V TREPGGTP AE  R  L+  G+  D+ 
Sbjct: 5   FIVIEGLEGAGKTTAINTVVETLKLAGINEMVFTREPGGTPLAEKLRE-LIKQGIEGDKV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQ 121
             +AE ++  AAR+  V+ VI+PAL  GK ++ DR   SS AYQG  R+  +HL + SL+
Sbjct: 64  TDKAELLMLYAARVQLVDTVIKPALAAGKWVIGDRHDLSSQAYQGGGREIDRHL-MASLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + +  P  T+ LDLP ++GL+R ++R        LD  E++ +   E+ R  +L++A
Sbjct: 123 NLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRHRYLELA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               D    +D++   + V T+I   + E + K
Sbjct: 177 AAD-DTILTIDASQDIEQVQTDIRRTLLEWLGK 208


>gi|163782656|ref|ZP_02177653.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882229|gb|EDP75736.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 200

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 14/200 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GKTT    L  FL+ K  DV + REPGGTP  E  R +L++  ++E   
Sbjct: 1   MLITFEGIDGSGKTTQSKKLYEFLREKGLDVSLYREPGGTPLGEELRDILINKELNE--- 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F  AR   V   ++P +  G +++ DRF DS+ AYQG        F+  L E +
Sbjct: 58  RTELLLFEGARTQLVLERLKPDMERGMVVILDRFTDSTLAYQGYGRGLDLEFVKKLNEFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T +LD+  +  + R+      RE +  D     +V   +K R+ FL+IAR +
Sbjct: 118 SFGIKPDITFLLDIEPETAVGRI------REKSRFD-----NVDFLKKVREGFLEIARKE 166

Query: 185 PDRCHIVDSAHSFQSVATNI 204
            +R  ++D+    + V  +I
Sbjct: 167 SERVVVLDTHRGEEEVFGDI 186


>gi|328758423|gb|EGF72039.1| thymidylate kinase [Propionibacterium acnes HL020PA1]
          Length = 214

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|52424624|ref|YP_087761.1| thymidylate kinase [Mannheimia succiniciproducens MBEL55E]
 gi|59798189|sp|Q65V34|KTHY_MANSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52306676|gb|AAU37176.1| Tmk protein [Mannheimia succiniciproducens MBEL55E]
          Length = 214

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 10/204 (4%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI  EG+EGAGKTT   +++++       D+  TREPGGTP AE  R+++     + 
Sbjct: 6   NGKFIVLEGLEGAGKTTARQAVVEQLNALGITDLLFTREPGGTPLAEKLRNLIKYETEEP 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQ G R    HL L++L
Sbjct: 66  VTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRQIDSHL-LETL 124

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  + +  PD T+ LDL   IGL R + R        LD  E++++   ++ R  +L++
Sbjct: 125 KKTVLGDFEPDFTLYLDLSPAIGLARARGR------GELDRIEQQNLAFFDRTRTRYLEL 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
            ++ P +  I+++  S + V  +I
Sbjct: 179 VKDNP-KAVIINAEQSIERVTADI 201


>gi|170718663|ref|YP_001783858.1| thymidylate kinase [Haemophilus somnus 2336]
 gi|189028835|sp|B0URV9|KTHY_HAES2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|168826792|gb|ACA32163.1| dTMP kinase [Haemophilus somnus 2336]
          Length = 210

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 14/220 (6%)

Query: 1   MNSGLFISFEGIEGAGKT-THISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EG+EGAGK+ TH  ++    +   ++V  TREPGGTP AE  R+++     
Sbjct: 1   MKTGKFIVIEGLEGAGKSSTHQVVVNTLTEFGIHEVVFTREPGGTPLAEKLRYLIKHEAE 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118
           +   A+AE ++  AAR+  VENVI+PAL  GK ++ DR   SS AYQ G R   +HL + 
Sbjct: 61  ELVTAKAELLMLYAARVQLVENVIKPALARGKWVVGDRHDLSSQAYQGGGRGLDRHL-MT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176
           +L+   + +  PD T+ LD+  +IGL R + R  L   E   LD+F R         R+ 
Sbjct: 120 TLKNAVLGDFKPDFTLYLDIEPEIGLARAKGRGELDRIEQQNLDFFHRT--------RER 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +L + +  P+   ++++    + V  +I   V + +++ V
Sbjct: 172 YLQLVQQDPNAV-LINAGQPIELVQQDIRKAVQKFIEENV 210


>gi|59798224|sp|Q6AB62|KTHY_PROAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 204

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 2   GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 62  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 122 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 173 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 204


>gi|314921698|gb|EFS85529.1| thymidylate kinase [Propionibacterium acnes HL050PA3]
          Length = 214

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|289424286|ref|ZP_06426069.1| dTMP kinase [Propionibacterium acnes SK187]
 gi|289428912|ref|ZP_06430592.1| dTMP kinase [Propionibacterium acnes J165]
 gi|295129812|ref|YP_003580475.1| dTMP kinase [Propionibacterium acnes SK137]
 gi|289154983|gb|EFD03665.1| dTMP kinase [Propionibacterium acnes SK187]
 gi|289157913|gb|EFD06136.1| dTMP kinase [Propionibacterium acnes J165]
 gi|291375883|gb|ADD99737.1| dTMP kinase [Propionibacterium acnes SK137]
 gi|313765300|gb|EFS36664.1| thymidylate kinase [Propionibacterium acnes HL013PA1]
 gi|313772784|gb|EFS38750.1| thymidylate kinase [Propionibacterium acnes HL074PA1]
 gi|313793193|gb|EFS41260.1| thymidylate kinase [Propionibacterium acnes HL110PA1]
 gi|313802718|gb|EFS43936.1| thymidylate kinase [Propionibacterium acnes HL110PA2]
 gi|313806376|gb|EFS44883.1| thymidylate kinase [Propionibacterium acnes HL087PA2]
 gi|313810924|gb|EFS48638.1| thymidylate kinase [Propionibacterium acnes HL083PA1]
 gi|313814577|gb|EFS52291.1| thymidylate kinase [Propionibacterium acnes HL025PA1]
 gi|313815332|gb|EFS53046.1| thymidylate kinase [Propionibacterium acnes HL059PA1]
 gi|313817530|gb|EFS55244.1| thymidylate kinase [Propionibacterium acnes HL046PA2]
 gi|313822009|gb|EFS59723.1| thymidylate kinase [Propionibacterium acnes HL036PA1]
 gi|313824095|gb|EFS61809.1| thymidylate kinase [Propionibacterium acnes HL036PA2]
 gi|313826462|gb|EFS64176.1| thymidylate kinase [Propionibacterium acnes HL063PA1]
 gi|313828770|gb|EFS66484.1| thymidylate kinase [Propionibacterium acnes HL063PA2]
 gi|313831689|gb|EFS69403.1| thymidylate kinase [Propionibacterium acnes HL007PA1]
 gi|313834429|gb|EFS72143.1| thymidylate kinase [Propionibacterium acnes HL056PA1]
 gi|313840380|gb|EFS78094.1| thymidylate kinase [Propionibacterium acnes HL086PA1]
 gi|314916047|gb|EFS79878.1| thymidylate kinase [Propionibacterium acnes HL005PA4]
 gi|314917199|gb|EFS81030.1| thymidylate kinase [Propionibacterium acnes HL050PA1]
 gi|314926586|gb|EFS90417.1| thymidylate kinase [Propionibacterium acnes HL036PA3]
 gi|314931095|gb|EFS94926.1| thymidylate kinase [Propionibacterium acnes HL067PA1]
 gi|314955036|gb|EFS99442.1| thymidylate kinase [Propionibacterium acnes HL027PA1]
 gi|314959075|gb|EFT03177.1| thymidylate kinase [Propionibacterium acnes HL002PA1]
 gi|314961349|gb|EFT05450.1| thymidylate kinase [Propionibacterium acnes HL002PA2]
 gi|314964605|gb|EFT08705.1| thymidylate kinase [Propionibacterium acnes HL082PA1]
 gi|314969704|gb|EFT13802.1| thymidylate kinase [Propionibacterium acnes HL037PA1]
 gi|314974770|gb|EFT18865.1| thymidylate kinase [Propionibacterium acnes HL053PA1]
 gi|314977031|gb|EFT21126.1| thymidylate kinase [Propionibacterium acnes HL045PA1]
 gi|314980307|gb|EFT24401.1| thymidylate kinase [Propionibacterium acnes HL072PA2]
 gi|314985483|gb|EFT29575.1| thymidylate kinase [Propionibacterium acnes HL005PA1]
 gi|314987392|gb|EFT31483.1| thymidylate kinase [Propionibacterium acnes HL005PA2]
 gi|314989067|gb|EFT33158.1| thymidylate kinase [Propionibacterium acnes HL005PA3]
 gi|315078377|gb|EFT50408.1| thymidylate kinase [Propionibacterium acnes HL053PA2]
 gi|315082155|gb|EFT54131.1| thymidylate kinase [Propionibacterium acnes HL078PA1]
 gi|315082702|gb|EFT54678.1| thymidylate kinase [Propionibacterium acnes HL027PA2]
 gi|315086061|gb|EFT58037.1| thymidylate kinase [Propionibacterium acnes HL002PA3]
 gi|315087646|gb|EFT59622.1| thymidylate kinase [Propionibacterium acnes HL072PA1]
 gi|315097318|gb|EFT69294.1| thymidylate kinase [Propionibacterium acnes HL038PA1]
 gi|315099505|gb|EFT71481.1| thymidylate kinase [Propionibacterium acnes HL059PA2]
 gi|315101988|gb|EFT73964.1| thymidylate kinase [Propionibacterium acnes HL046PA1]
 gi|315106312|gb|EFT78288.1| thymidylate kinase [Propionibacterium acnes HL030PA1]
 gi|315110089|gb|EFT82065.1| thymidylate kinase [Propionibacterium acnes HL030PA2]
 gi|327331312|gb|EGE73051.1| dTMP kinase [Propionibacterium acnes HL096PA2]
 gi|327333300|gb|EGE75020.1| dTMP kinase [Propionibacterium acnes HL096PA3]
 gi|327445223|gb|EGE91877.1| thymidylate kinase [Propionibacterium acnes HL013PA2]
 gi|327447308|gb|EGE93962.1| thymidylate kinase [Propionibacterium acnes HL043PA1]
 gi|327450246|gb|EGE96900.1| thymidylate kinase [Propionibacterium acnes HL043PA2]
 gi|327454514|gb|EGF01169.1| thymidylate kinase [Propionibacterium acnes HL087PA3]
 gi|327456584|gb|EGF03239.1| thymidylate kinase [Propionibacterium acnes HL083PA2]
 gi|327457142|gb|EGF03797.1| thymidylate kinase [Propionibacterium acnes HL092PA1]
 gi|328755566|gb|EGF69182.1| thymidylate kinase [Propionibacterium acnes HL087PA1]
 gi|328756894|gb|EGF70510.1| thymidylate kinase [Propionibacterium acnes HL025PA2]
 gi|328761125|gb|EGF74669.1| dTMP kinase [Propionibacterium acnes HL099PA1]
          Length = 214

 Score =  114 bits (284), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|221134523|ref|ZP_03560828.1| thymidylate kinase [Glaciecola sp. HTCC2999]
          Length = 211

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGK+T I  ++R L+   +++ +TREPGGTP AEA R  +     DE  
Sbjct: 5   GQFIVVEGLEGAGKSTVIKAIQRELEAHGHELKLTREPGGTPMAEAIRDCVKHDWQDEIV 64

Query: 64  AE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            E  E ++  AAR   +EN I+PAL  G  +L DR   SS AYQG         L++++E
Sbjct: 65  TEQTELLLMYAARSQLIENTIKPALANGIWVLGDRHDWSSLAYQGGGRQVNLAHLNAIRE 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++     + TI LD+   +GL R   R        LD  E+  +   E+ R+ +L++ +
Sbjct: 125 LTLDGFTANLTIYLDINPKVGLSRAAAR------GELDRIEQSGLAFFERARETYLNLVK 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N  D   ++D+  S   V  +++  V
Sbjct: 179 N-SDSAILIDAEQSIDKVREDVITAV 203


>gi|330814087|ref|YP_004358326.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487182|gb|AEA81587.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 211

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 7/194 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +N G+FI+FEGIEG+GK+T I LL +FL+   +  +++TREPGGT  +E  R +++    
Sbjct: 3   LNRGIFITFEGIEGSGKSTQIKLLYKFLKANVSKKIYLTREPGGTKISEKIRKLVIKDLN 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E     E  +  AAR +H + +I+  L  G I+LCDR+LDS+ AYQ    S     +  
Sbjct: 63  EENNPLTELFLLFAARAEHYD-LIKEKLRSGYIVLCDRYLDSTIAYQHFNGSIDLKLIHY 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++  + + P+ TI+LD    +  KR+  R     +  LD F+R+ +      ++ FL 
Sbjct: 122 LQKLIDKNIRPNLTILLDANPSVSKKRMHLR-----AKKLDRFDRESLKKMNIIKKGFLA 176

Query: 180 IARNQPDRCHIVDS 193
           IA+ +  R  +++ 
Sbjct: 177 IAKVEKKRIFVING 190


>gi|160898829|ref|YP_001564411.1| thymidylate kinase [Delftia acidovorans SPH-1]
 gi|160364413|gb|ABX36026.1| dTMP kinase [Delftia acidovorans SPH-1]
          Length = 228

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 98/175 (56%), Gaps = 19/175 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFISFEGI+GAGK++HI+ L +  + +   V +TREPGGTP AE  R ++L   +D  
Sbjct: 7   AGLFISFEGIDGAGKSSHIASLAQAFRDQGRTVTLTREPGGTPLAEKLRALMLHDAMDPL 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++  AAR DH+  VI PAL  G+++LCDRF D+++AYQG         L +L+ 
Sbjct: 67  ---TEALIAFAARRDHLVQVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLQPLATLER 123

Query: 123 ISVQEVMPD--------CTIILDLPVDIGLK-----RVQNRYSLRESACLDYFER 164
           +      P          T+  DLP ++  +     RV +R+   ES    +F R
Sbjct: 124 MVQTGTAPQPDLLREPHLTLWFDLPAEVAAERLASARVPDRF---ESEPGSFFAR 175


>gi|251793227|ref|YP_003007955.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700]
 gi|247534622|gb|ACS97868.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700]
          Length = 210

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 111/208 (53%), Gaps = 12/208 (5%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T H  ++    +    DV  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSTAHQCVVDALKELGIDDVVFTREPGGTPLAEKLRHLIKHETEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L SL+E
Sbjct: 63  TDKAELLMLYAARIQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLDQRLLQSLKE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
             + +  PD T+ LD+   +GL R + R  L   E   LD+F R         R  +L +
Sbjct: 123 TILGDFEPDLTLYLDIDPAVGLARARGRGELDRIEQQNLDFFHRT--------RARYLAL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            ++ P +  I+++    + V T+I + V
Sbjct: 175 VKDNP-KAVIINAEQPVEQVKTDIQSAV 201


>gi|189350690|ref|YP_001946318.1| thymidylate kinase [Burkholderia multivorans ATCC 17616]
 gi|189334712|dbj|BAG43782.1| dTMP kinase [Burkholderia multivorans ATCC 17616]
          Length = 207

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 2   MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 62  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVL 204


>gi|161524554|ref|YP_001579566.1| thymidylate kinase [Burkholderia multivorans ATCC 17616]
 gi|160341983|gb|ABX15069.1| dTMP kinase [Burkholderia multivorans ATCC 17616]
          Length = 206

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 172 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVL 203


>gi|145636277|ref|ZP_01791946.1| thymidylate kinase [Haemophilus influenzae PittHH]
 gi|145270442|gb|EDK10376.1| thymidylate kinase [Haemophilus influenzae PittHH]
          Length = 210

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  R ++     +  
Sbjct: 3   GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRDLIKHETEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+E
Sbjct: 63  TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI LD+   IGL R + R        LD  E+ D+    + R  +L + +
Sbjct: 123 TVLGDFEPDLTIYLDIDPSIGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  S + V  +I + V
Sbjct: 177 DNP-KAVMINAEQSIELVQADIESAV 201


>gi|221198166|ref|ZP_03571212.1| thymidylate kinase [Burkholderia multivorans CGD2M]
 gi|221208343|ref|ZP_03581346.1| thymidylate kinase [Burkholderia multivorans CGD2]
 gi|221215091|ref|ZP_03588058.1| thymidylate kinase [Burkholderia multivorans CGD1]
 gi|221165027|gb|EED97506.1| thymidylate kinase [Burkholderia multivorans CGD1]
 gi|221171756|gb|EEE04200.1| thymidylate kinase [Burkholderia multivorans CGD2]
 gi|221182098|gb|EEE14499.1| thymidylate kinase [Burkholderia multivorans CGD2M]
          Length = 207

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 2   MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 62  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFARTRGE 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVL 204


>gi|254796905|ref|YP_003081742.1| thymidylate kinase [Neorickettsia risticii str. Illinois]
 gi|254590141|gb|ACT69503.1| thymidylate kinase [Neorickettsia risticii str. Illinois]
          Length = 199

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 83/132 (62%), Gaps = 3/132 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GK+T + LL +FL +  Y   +TREPGGTP AE+ R ++L   +D    
Sbjct: 1   MFIVFEGIDGSGKSTQVKLLSKFLAKNGYPCVLTREPGGTPFAESLRSMILHDSIDPM-- 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++   AR+DH   VI PAL EGKI++CDRF+ S+ AYQG  +      +  L ++S
Sbjct: 59  -ARLLLIVGARVDHYNKVILPALKEGKIVVCDRFIYSTLAYQGYGEKIDLQTILDLHKLS 117

Query: 125 VQEVMPDCTIIL 136
              V PD T++L
Sbjct: 118 GCLVEPDLTLLL 129


>gi|323340134|ref|ZP_08080398.1| dTMP kinase [Lactobacillus ruminis ATCC 25644]
 gi|323092325|gb|EFZ34933.1| dTMP kinase [Lactobacillus ruminis ATCC 25644]
          Length = 210

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 9/212 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFG 63
           +FI+FEG +G+GKT+ I  + + L++     +V TREPGG   +EA R+V+L     E  
Sbjct: 1   MFITFEGTDGSGKTSVIKAIVKELEKNGKTEYVLTREPGGNRISEAIRNVILDERFVEMD 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AAAR  H+   I PAL  GK++LCDRF+DSS  YQG   S     +  +   
Sbjct: 61  ERTEALLYAAARRQHIVETINPALSAGKLVLCDRFVDSSIVYQGAGRSIGTDRIAEMNRF 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + PD TI LD+  ++GL+R++ R    E   LD+   + +  +      +L++A  
Sbjct: 121 ATDGLTPDLTIFLDIEPELGLERIR-RNRQDEVNRLDH---EKMSFYRTVHDAYLELATK 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              R   VD++   ++V       V E+++KR
Sbjct: 177 DSKRIVEVDASQPLEAVIFE----VREILKKR 204


>gi|89095549|ref|ZP_01168452.1| thymidylate kinase [Oceanospirillum sp. MED92]
 gi|89080187|gb|EAR59456.1| thymidylate kinase [Oceanospirillum sp. MED92]
          Length = 214

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 6/202 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG EG GK+T+I  L   L  +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 6   SGRFITVEGTEGVGKSTNIEYLCSLLDAQGIEVVLTREPGGTPLAEELRELLLAPREETV 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+ENVI+PAL  G  ++ DRF D+++AYQG         + +L+ 
Sbjct: 66  SEDTELLLMFAARAQHLENVIKPALGRGAWVVSDRFTDATFAYQGGGRGVNVDHIQALET 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I    + PD T++LDL V+ GLKR   R      +  D FER+ +   EK R  +L  A 
Sbjct: 126 IVQHGLQPDLTLLLDLDVETGLKRASKR------SEPDRFEREKLDFFEKVRSTYLQRAS 179

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
            +P+R  ++D+  S   V + I
Sbjct: 180 AEPERFAVIDAGRSIPDVQSQI 201


>gi|283768611|ref|ZP_06341523.1| dTMP kinase [Bulleidia extructa W1219]
 gi|283105003|gb|EFC06375.1| dTMP kinase [Bulleidia extructa W1219]
          Length = 225

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 5/203 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI+ EG +G+GK+T    + + LQ++ Y + +TREPGG+  AE  R ++L     
Sbjct: 16  MKKALFITIEGPDGSGKSTVSQTVCQRLQQEGYRLQLTREPGGSKIAEQIRSIILDPQNT 75

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A  EA+++AA+R  H+ + + PAL  G  ++ DRF+DSS AYQG         +  +
Sbjct: 76  DMDARTEALLYAASRRQHLMDKVLPALENGIPVISDRFVDSSLAYQGVGRCIGIEPVWLI 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++  +PD TI LD+  + GL+R+Q     +    LD  ++++   H +  Q +  I
Sbjct: 136 NEFAIEGCLPDKTIYLDIDAETGLRRIQ-----KGRNQLDRLDQEEASFHTRVFQGYQTI 190

Query: 181 ARNQPDRCHIVDSAHSFQSVATN 203
            +  PDR   VD+    + V  +
Sbjct: 191 LKRFPDRFIKVDARQGLEKVVED 213


>gi|228989239|ref|ZP_04149232.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442]
 gi|228995422|ref|ZP_04155092.1| Thymidylate kinase [Bacillus mycoides Rock3-17]
 gi|229003036|ref|ZP_04160893.1| Thymidylate kinase [Bacillus mycoides Rock1-4]
 gi|228758194|gb|EEM07382.1| Thymidylate kinase [Bacillus mycoides Rock1-4]
 gi|228764283|gb|EEM13160.1| Thymidylate kinase [Bacillus mycoides Rock3-17]
 gi|228770449|gb|EEM19020.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442]
          Length = 208

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GK+T I+ L  + ++K   V  TREPGG   +E  R +L +      
Sbjct: 2   KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIRAILHNQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +  ++LCDRF+DSS AYQG    ++ L +D + E
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEKNYLVLCDRFIDSSLAYQG---YARGLGIDKVFE 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   + ++ MP+ TI LD+  + GL R++   + RE   LD    + +  H+  R  +L 
Sbjct: 119 INRFATEDCMPNLTIYLDIEPEAGLARIEKDAN-REVNRLDM---ESIEFHKCVRDGYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +     DR  +V++    + +   ++ ++
Sbjct: 175 VVDRFLDRIVVVNADQPIEKIVEEVIQLI 203


>gi|222152173|ref|YP_002561333.1| putative thymidylate kinase homolog [Macrococcus caseolyticus
           JCSC5402]
 gi|222121302|dbj|BAH18637.1| putative thymidylate kinase homolog [Macrococcus caseolyticus
           JCSC5402]
          Length = 204

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 120/208 (57%), Gaps = 9/208 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDEFGA 64
           FI+ EG EG+GKTT I  +   L  + +DV  TREPGG   +E  R +LL    V ++  
Sbjct: 4   FITIEGPEGSGKTTVIKAIADHLIAR-FDVVCTREPGGIKISEDIRKILLDEANVMDY-- 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA+R  H+   + PAL +G+I++CDRF+DSS AYQG         + S+ E +
Sbjct: 61  RTEALLFAASRRQHLIEKVLPALQKGEIVICDRFIDSSLAYQGYARGIGMDEIRSINEFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   PD T+ L +  +IGL R+++  + RE+  LD   ++ +  HE+  + +  +A   
Sbjct: 121 IEGKYPDLTLYLKVSAEIGLNRIKD--NSRETNRLD---KEAIDFHEQVVEGYDILAAQY 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P+R  I+D+  S + V +  +  + +L+
Sbjct: 176 PERIRIIDAEQSPEQVVSESMKWINQLL 203


>gi|309782015|ref|ZP_07676745.1| dTMP kinase [Ralstonia sp. 5_7_47FAA]
 gi|308919081|gb|EFP64748.1| dTMP kinase [Ralstonia sp. 5_7_47FAA]
          Length = 205

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 19/213 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + LQ K       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A R +H+  VI+PAL  G  ++ DRF D+++AYQG     + L +D
Sbjct: 60  -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQG---GGRGLAID 115

Query: 119 SLQ--EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            L+  E  VQ+ + P  TI+ DL  +I   R      L ++   D FE +      + R 
Sbjct: 116 RLEVLERWVQQGLQPTKTILFDLAPEIAAAR------LADARTPDKFEAESAQFFLRTRA 169

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A  +PDR  ++++      +  ++ N++
Sbjct: 170 EYLRRAAAEPDRFVVLNANRERADIQKDLENLL 202


>gi|315633633|ref|ZP_07888923.1| dTMP kinase [Aggregatibacter segnis ATCC 33393]
 gi|315477675|gb|EFU68417.1| dTMP kinase [Aggregatibacter segnis ATCC 33393]
          Length = 210

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 12/209 (5%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI  EG+EGAGK+T H  ++    +    DV  TREPGGTP AE  RH++     + 
Sbjct: 2   AGKFIVIEGLEGAGKSTAHQCVVDTLKELGVNDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG        FL  L+
Sbjct: 62  VTDKAELLMLYAARIQLVDNVIKPALAKGKWVVGDRHDMSSQAYQGGGRQLGAAFLTHLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +I + +  PD T+ LD+   +GL R + R  L   E   LD+F R         R  +L+
Sbjct: 122 QIVLGDFEPDLTLYLDIDPAVGLARARGRGELDRIEQQHLDFFHRT--------RARYLE 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + ++ P +  ++++  S + V  +I + V
Sbjct: 174 LVKDNP-KAVMINAEQSIEQVQADIKSAV 201


>gi|113867580|ref|YP_726069.1| thymidylate kinase [Ralstonia eutropha H16]
 gi|122946913|sp|Q0KBC0|KTHY_RALEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|113526356|emb|CAJ92701.1| thymidylate kinase (dTMP kinase) [Ralstonia eutropha H16]
          Length = 203

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FI+FEGI+GAGK+THI  +   L+ ++    V  TREPGGT   E  R +LL     +
Sbjct: 3   GKFITFEGIDGAGKSTHIDWVADRLRARSDIAGVVTTREPGGTSLGEDLRQILLHR---K 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  AAR +H+  VI PAL  GK ++ DRF D+++AYQG         L+ L+
Sbjct: 60  MHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVLE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD T++ D+P++   +R+        +   D FE +     ++ R  +L  A
Sbjct: 120 DWVQGGLQPDLTLLFDVPLETASERLAG------ARAPDRFESESRAFFQRTRDEYLRRA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P R  ++D+  S   +   +  I+
Sbjct: 174 AQSPQRFRVIDATRSIADIRDELEKII 200


>gi|91788382|ref|YP_549334.1| thymidylate kinase [Polaromonas sp. JS666]
 gi|123164854|sp|Q12AK6|KTHY_POLSJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91697607|gb|ABE44436.1| thymidylate kinase [Polaromonas sp. JS666]
          Length = 225

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 37/231 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEGI+GAGK+THI+ L    + +   V +TREPGGTP AE  R ++L+  +D   
Sbjct: 3   GLFISFEGIDGAGKSTHIAGLADAFRAQGRAVTLTREPGGTPLAEKLRDLVLNDAMDSL- 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++  AAR DH+  VI PAL+ G ++LCDRF D+++AYQG         L +L++ 
Sbjct: 62  --TEALLIFAARRDHLVRVIAPALVRGDVVLCDRFTDATFAYQGAGRGFDLAVLATLEQW 119

Query: 124 -------------------SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                               V+ V+ P  T+  DLP +    R+Q       +   D FE
Sbjct: 120 VQSDEGLLGDPAGNFPMKPEVETVIEPHLTVWFDLPPEEAALRLQG------ARVPDKFE 173

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            + +    +  + + D  +  P+R   ++        A+   ++VW+ V++
Sbjct: 174 AQPLEFFRRVAKGYSDRQQGHPERFARIN--------ASQPRDVVWQAVRQ 216


>gi|225867971|ref|YP_002743919.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
 gi|259494281|sp|C0MGT8|KTHY_STRS7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225701247|emb|CAW98209.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
          Length = 211

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 5/201 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+FEG +GAGKTT +  L   LQ      +  TREPGG   AE  R ++L    
Sbjct: 1   MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I PAL  G ++L DRF+DSS AYQG         +  
Sbjct: 61  TTMDDKTELLLYIAARRQHLVEKIMPALEAGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   V PD T+  D+P ++GL R+      RE   LD  E+ D  +H++ R+ +L+
Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE-REVNRLD-LEQLD--LHQRVRKGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +A   P R   +D++   +SV
Sbjct: 177 LALENPQRIVKIDASQDLESV 197


>gi|269796533|ref|YP_003315988.1| thymidylate kinase [Sanguibacter keddieii DSM 10542]
 gi|269098718|gb|ACZ23154.1| thymidylate kinase [Sanguibacter keddieii DSM 10542]
          Length = 215

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 11/210 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            SG FISFEG +GAGK+T   LL  +L++     V  TREPGGT      R  +L    D
Sbjct: 6   QSGYFISFEGGDGAGKSTQSRLLGEWLEQVTGRRVVWTREPGGTELGLVLRQAVLHG--D 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++A  R  HV +++RPAL  G +++ DR+LDSS AYQ    +     ++ L
Sbjct: 64  HVDPRTEALLYATDRAHHVASLVRPALERGDVVITDRYLDSSIAYQAGGRTLPVEEIEQL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + + ++P  T++LD+   +G +R+         A  D  ER     H + RQ +L+ 
Sbjct: 124 STWATEGLLPHATVLLDIDPLVGTRRL--------DAAPDRLERAGDEFHRRTRQAYLER 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A   P R  +VD++ +  ++   I + V E
Sbjct: 176 AAQDPARWVVVDASGTVDAIHREIRSAVAE 205


>gi|157375783|ref|YP_001474383.1| dTMP kinase [Shewanella sediminis HAW-EB3]
 gi|157318157|gb|ABV37255.1| dTMP kinase [Shewanella sediminis HAW-EB3]
          Length = 210

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 114/205 (55%), Gaps = 10/205 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63
           FI  EG+EGAGK++ ISL++ F+++      V TREPGGTP AE  R ++ ++   D   
Sbjct: 9   FIVIEGLEGAGKSSAISLVRDFIEKHTGTAPVCTREPGGTPLAERMRDLVKIADESDPLC 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++  AAR   V NVI+PAL  G+ +L DR   SS AYQG       L ++ +   
Sbjct: 69  DEAECLLLYAARAQLVANVIKPALTRGEWVLGDRHNLSSLAYQGGGRGLMDL-VEVVSHA 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ E  PD TI LD+  ++GL R  +R        LD  E++++   E+ R  FL  A +
Sbjct: 128 TLGEFKPDLTIYLDIDPELGLSRAASRGE------LDRIEKQELAFFERARGTFLSFA-S 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           + D   ++D+  +   V  +IL ++
Sbjct: 181 KDDSIAVIDAGQTMAEVHKDILALL 205


>gi|225861172|ref|YP_002742681.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230558|ref|ZP_06964239.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254568|ref|ZP_06978154.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298503053|ref|YP_003724993.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A]
 gi|254808311|sp|C1CRV9|KTHY_STRZT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225727066|gb|ACO22917.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238648|gb|ADI69779.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A]
 gi|327389215|gb|EGE87560.1| thymidylate kinase [Streptococcus pneumoniae GA04375]
          Length = 212

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V     +++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKSVLFD 206


>gi|329939427|ref|ZP_08288763.1| integral membrane protein with kinase activity [Streptomyces
           griseoaurantiacus M045]
 gi|329301656|gb|EGG45550.1| integral membrane protein with kinase activity [Streptomyces
           griseoaurantiacus M045]
          Length = 1078

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T    L  +++ K ++V +T EPG TP  +  R +LL       
Sbjct: 504 NGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTHEPGATPVGKRLRSILLDVSSAGL 563

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 564 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 623

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+      +R         +   D  E +    H + R  FL +A 
Sbjct: 624 WATNGLVPHLTVLLDVDPQAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 675

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P R  +VD     ++V T +
Sbjct: 676 ADPGRYLVVDGGQEPEAVTTAV 697


>gi|206560328|ref|YP_002231092.1| thymidylate kinase [Burkholderia cenocepacia J2315]
 gi|229487614|sp|B4EBJ2|KTHY_BURCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|198036369|emb|CAR52265.1| putative thymidylate kinase [Burkholderia cenocepacia J2315]
          Length = 206

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 15/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH++     LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLAWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +  +R       R +A + D FE +      + R 
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFSRTRA 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A   P R  IVD+  S   +   +  ++
Sbjct: 171 EYLRRAEEAPHRFAIVDATRSIPEIRQQLERVL 203


>gi|107028928|ref|YP_626023.1| thymidylate kinase [Burkholderia cenocepacia AU 1054]
 gi|116689914|ref|YP_835537.1| thymidylate kinase [Burkholderia cenocepacia HI2424]
 gi|170733252|ref|YP_001765199.1| thymidylate kinase [Burkholderia cenocepacia MC0-3]
 gi|123070937|sp|Q1BH55|KTHY_BURCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221725|sp|A0K817|KTHY_BURCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487584|sp|B1JTS0|KTHY_BURCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|105898092|gb|ABF81050.1| thymidylate kinase [Burkholderia cenocepacia AU 1054]
 gi|116648003|gb|ABK08644.1| thymidylate kinase [Burkholderia cenocepacia HI2424]
 gi|169816494|gb|ACA91077.1| dTMP kinase [Burkholderia cenocepacia MC0-3]
          Length = 206

 Score =  113 bits (282), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVL 203


>gi|325520827|gb|EGC99827.1| thymidylate kinase [Burkholderia sp. TJI49]
          Length = 206

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 15/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGRLASAGKQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +  +R       R +A + D FE +      + R 
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFTRTRS 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A   P R  IVD+  S   +   +  ++
Sbjct: 171 EYLRRAEEAPHRFAIVDATQSIPEIRQQLERVL 203


>gi|299529315|ref|ZP_07042754.1| thymidylate kinase [Comamonas testosteroni S44]
 gi|298722693|gb|EFI63611.1| thymidylate kinase [Comamonas testosteroni S44]
          Length = 229

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 21/220 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  GLFISFEGI+GAGK++HI  L +  + +   V +TREPGGT  AE  R ++L   +D
Sbjct: 5   LPKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTSLAEKLRALMLHDAMD 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++  AAR DH+  VI PAL  G++++ DRF D+++AYQG         L +L
Sbjct: 65  PL---TEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSAL 121

Query: 121 QEISVQEVM------------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           + ++                 PD T+  DLP ++  +R      L  +   D FE +   
Sbjct: 122 ERMAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAER------LATARVPDRFEAQPGE 175

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +  + + + AR  P R   +D+  S  +V   I   V
Sbjct: 176 FFARVAKGYAERARTAPGRFVRIDAHASRHAVWQQITQAV 215


>gi|37526718|ref|NP_930062.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|46576411|sp|Q7N391|KTHY_PHOLL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|36786150|emb|CAE15202.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 212

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKT+ +  +   LQ+    ++  TREPGGTP AE  R  L+  GV
Sbjct: 1   MNSK-FIVIEGLEGAGKTSAMKTIVEMLQQHGIQNLIFTREPGGTPLAEKLRG-LIKQGV 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +      +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  EGEPLTDKAEVLMLYAARVQLVENVIKPALARGTWVVGDRHDLSSQAYQGGGRGIDKNLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL++  + +  PD TI LDLP  IGL R       RE   LD  E++ +   ++ R  +
Sbjct: 119 TSLRDTVLGDFRPDLTIYLDLPPQIGLLRA------RERGELDRIEKESMDFFDRTRSRY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           L+ A  Q      VD+A   + V  +I  ++ + ++++
Sbjct: 173 LEFA-AQDKSIVTVDAAQPIEQVQADIYQVLEQWLKQQ 209


>gi|83748622|ref|ZP_00945641.1| Thymidylate kinase [Ralstonia solanacearum UW551]
 gi|207723527|ref|YP_002253926.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           MolK2]
 gi|207743119|ref|YP_002259511.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           IPO1609]
 gi|83724746|gb|EAP71905.1| Thymidylate kinase [Ralstonia solanacearum UW551]
 gi|206588728|emb|CAQ35691.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           MolK2]
 gi|206594516|emb|CAQ61443.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           IPO1609]
          Length = 205

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 13/195 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  +I   R      L ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDS 193
             A  +P+R  I+D+
Sbjct: 173 RRAAAEPERFVIIDA 187


>gi|57641338|ref|YP_183816.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
 gi|73920827|sp|Q5JH21|KTHY_PYRKO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|57159662|dbj|BAD85592.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
          Length = 205

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
           +FI  EGI+GAGK+T   LL  + + + Y+V +T+EP  TP  +  R ++L+ G +    
Sbjct: 1   MFIVLEGIDGAGKSTQAKLLAEWFENRGYEVVLTKEPTDTPFGKLIRRLVLTGGKEGIID 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +   EAEA++FAA R +HV+ +I+P+L  GK+++ DR+  SS AYQ  R     L L+
Sbjct: 61  GAKISHEAEALLFAADRAEHVDKLIKPSLEAGKVVISDRYFYSSLAYQWARG----LDLE 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L +++   V PD   +LDLPV   + R+++R    +S     FE     +  K R+ +L
Sbjct: 117 WLIDLNRFAVKPDIVFLLDLPVKESMNRIRSRKV--KSEFDKIFE-----LQRKVRENYL 169

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +A   P+   I+++    ++V   I+ ++
Sbjct: 170 KLAEMFPE-MKIINAMEDVETVHNQIIALI 198


>gi|237808932|ref|YP_002893372.1| thymidylate kinase [Tolumonas auensis DSM 9187]
 gi|237501193|gb|ACQ93786.1| thymidylate kinase [Tolumonas auensis DSM 9187]
          Length = 209

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FI  EG+EGAGK+T +S +  +L++     +  TREPGGTP AE  R ++     + 
Sbjct: 2   SGKFIVIEGLEGAGKSTAVSYVLDWLRQHGITRIETTREPGGTPLAEKMRSIVKEVHDEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VEN I+PAL  G  ++ DR   SS AYQG       + +  ++
Sbjct: 62  LTVQAELLLMYAARVQLVENRIKPALQSGYWVVGDRHDLSSQAYQGGGRGIDPVLISQIK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+   IGL R + R        LD  E++ +   ++ R  +L++A
Sbjct: 122 QAVLGDFAPDLTLYLDIDPAIGLHRARQR------GELDRIEQEALAFFQRTRARYLELA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           R  P R  I+D++ + + V   I
Sbjct: 176 RQDP-RISIIDASQTPEQVQAAI 197


>gi|17546503|ref|NP_519905.1| thymidylate kinase [Ralstonia solanacearum GMI1000]
 gi|23821784|sp|Q8XYH4|KTHY_RALSO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|17428801|emb|CAD15486.1| probable thymidylate kinase (dtmp kinase) protein [Ralstonia
           solanacearum GMI1000]
          Length = 205

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 13/198 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  ++   R      L ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHS 196
             A  +P R  ++D+A +
Sbjct: 173 RRAAAEPGRFVVIDAARA 190


>gi|322376438|ref|ZP_08050931.1| dTMP kinase [Streptococcus sp. M334]
 gi|321282245|gb|EFX59252.1| dTMP kinase [Streptococcus sp. M334]
          Length = 212

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
              + +R   +D++   + V
Sbjct: 177 LEKEGNRIVKIDASLPLEQV 196


>gi|227326856|ref|ZP_03830880.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 219

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT  +++   L+     DV  TREPGGTP AE  R ++     
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGMA 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  V+NVI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R       R+   LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRA------RQRGELDRIEQESLAFFDRTRSRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A  + D    +D++ S  +V+ +I
Sbjct: 174 ELA-AEDDSILTIDASQSIDAVSADI 198


>gi|238027001|ref|YP_002911232.1| thymidylate kinase [Burkholderia glumae BGR1]
 gi|237876195|gb|ACR28528.1| Thymidylate kinase [Burkholderia glumae BGR1]
          Length = 206

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++     L+ K       V  TREPGGT   EA R +LL 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFCEHLRAKIAPAGRQVVQTREPGGTVLGEALRALLLE 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLARVIEPALTRGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+P ++  +R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPEVASER---RGAVR---APDKFESESEAFFLRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD+  S   +   +  ++
Sbjct: 172 YLRRAEEAPHRFLIVDATQSIPQIQRQLEGVL 203


>gi|139439946|ref|ZP_01773283.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC
           25986]
 gi|133774712|gb|EBA38532.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC
           25986]
          Length = 227

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 6/195 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG++GAGK+T   LL R L+   Y V   REPGGT  +E  R +LL       G  
Sbjct: 10  FITLEGVDGAGKSTQARLLARALELAGYQVVSLREPGGTAISEKIRALLLDPANTAMGDT 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E +++ AAR   V  VI PAL  GK++LCDRF DS+  YQ   D      +     ++V
Sbjct: 70  CELLLYEAARAQLVHEVIAPALAAGKVVLCDRFYDSTTCYQAFADGLDRQMVRDANNLAV 129

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               P  T++  +  +    R+ +R         D  E K +   E+  Q F  IA  +P
Sbjct: 130 AGTHPALTLVYHITPEQAALRMADR------GAADRMEAKGMAFQERVYQGFCAIAAEEP 183

Query: 186 DRCHIVDSAHSFQSV 200
           +R  ++D+  + + V
Sbjct: 184 NRVKLIDATATIEEV 198


>gi|94993722|ref|YP_601820.1| thymidylate kinase [Streptococcus pyogenes MGAS10750]
 gi|94547230|gb|ABF37276.1| Thymidylate kinase [Streptococcus pyogenes MGAS10750]
          Length = 253

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGRLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|78066662|ref|YP_369431.1| thymidylate kinase [Burkholderia sp. 383]
 gi|123568272|sp|Q39FH9|KTHY_BURS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77967407|gb|ABB08787.1| thymidylate kinase [Burkholderia sp. 383]
          Length = 206

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 105/205 (51%), Gaps = 15/205 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGKLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +  +R       R +A + D FE +      + R 
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFSRTRS 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSV 200
            +L  A   P R  IVD+  +   +
Sbjct: 171 EYLRRAEEAPHRFAIVDATQTIPEI 195


>gi|319941084|ref|ZP_08015420.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B]
 gi|319805441|gb|EFW02243.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B]
          Length = 203

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 12/204 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EGI+GAGK+T    L + L  +   V  TREPGGTP AE  R +LL+   DE  
Sbjct: 3   GRFITIEGIDGAGKSTQTESLLKHLADQGVSVLHTREPGGTPLAEKIRAMLLA---DEMA 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121
            +AE ++F AAR DHV  VIRP L  G+ +L DRF D++YAYQ  G+  S +   +++L+
Sbjct: 60  PDAETLLFFAARADHVRRVIRPTLESGRWVLSDRFTDATYAYQVGGKGFSGEK--VEALE 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++    PD T++ D+        V        +   D FER       + R+ +L  A
Sbjct: 118 NWTLGGFAPDLTLLFDI-----APAVAAARLRARAGDQDRFERMGEAFFTRVREAYLARA 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205
              P+R  I+D+    + V+ +I 
Sbjct: 173 AAAPERFLIIDADRPAKDVSADIF 196


>gi|86148586|ref|ZP_01066870.1| thymidylate kinase [Vibrio sp. MED222]
 gi|85833615|gb|EAQ51789.1| thymidylate kinase [Vibrio sp. MED222]
          Length = 210

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 17/210 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+     D+  TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLV----K 56

Query: 60  DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +E   E      E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG       
Sbjct: 57  EEHEGEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             ++SL+E ++    PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R
Sbjct: 117 TTMESLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           + +L+IA  Q D   ++++    + VA +I
Sbjct: 171 ERYLEIA-GQDDSVLVINAQQELEQVAADI 199


>gi|77414833|ref|ZP_00790949.1| thymidylate kinase [Streptococcus agalactiae 515]
 gi|77159110|gb|EAO70305.1| thymidylate kinase [Streptococcus agalactiae 515]
          Length = 163

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQ 148
           L + +     PD  +  D+P ++GL+R+Q
Sbjct: 121 LNDYATDSHKPDLXLYFDVPSEVGLERIQ 149


>gi|167629308|ref|YP_001679807.1| thymidylate kinase [Heliobacterium modesticaldum Ice1]
 gi|167592048|gb|ABZ83796.1| thymidylate kinase [Heliobacterium modesticaldum Ice1]
          Length = 226

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 112/210 (53%), Gaps = 1/210 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +GAGKTT  +LL +  +   Y V  TREPGGTP +EAAR VLL   +    
Sbjct: 9   GLFITLEGADGAGKTTQGALLAQAFRILGYPVVETREPGGTPVSEAARRVLLDPSLKGMV 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE  ++A AR   V  VIRPAL  G +++CDRF DS+ AYQG         L ++ E+
Sbjct: 69  PMAELFLYATARAQLVSEVIRPALASGAVVICDRFTDSTLAYQGFGRGLDLEQLAAINEM 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   + PD T++LD+    GL R +  R    +   +D  E ++   HE+ R+ FL +A 
Sbjct: 129 ATGGLTPDLTLLLDIDTGEGLVRARLRRPEGTKWQGVDRMELEEAAFHERVRRGFLQLAE 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               R   + +  +   V   I++    LV
Sbjct: 189 KDRARICPIAAGGAIAEVHRRIIDAARRLV 218


>gi|68249058|ref|YP_248170.1| thymidylate kinase [Haemophilus influenzae 86-028NP]
 gi|68057257|gb|AAX87510.1| thymidylate kinase [Haemophilus influenzae 86-028NP]
          Length = 219

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 8/203 (3%)

Query: 3   SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+N+I+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           +  P +  ++++  S + V  +I
Sbjct: 185 KENP-KAVVINAEQSIELVQADI 206


>gi|21909825|ref|NP_664093.1| thymidylate kinase [Streptococcus pyogenes MGAS315]
 gi|161486344|ref|NP_802832.2| thymidylate kinase [Streptococcus pyogenes SSI-1]
 gi|25453083|sp|Q8K8H4|KTHY_STRP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21904011|gb|AAM78896.1| putative thymidylate kinase [Streptococcus pyogenes MGAS315]
          Length = 211

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 209


>gi|212712810|ref|ZP_03320938.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM
           30120]
 gi|212684502|gb|EEB44030.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM
           30120]
          Length = 208

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 11/202 (5%)

Query: 6   FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62
           FI  EG+EGAGKTT I ++++   Q   +D+  TREPGGTP AE  R  L+  G+  D+ 
Sbjct: 5   FIVIEGLEGAGKTTAINTVVETLTQAGVHDMVFTREPGGTPLAEKLRE-LIKQGIEGDKV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  V+ VI+PAL EGK ++ DR   SS AYQG         + SL++
Sbjct: 64  TDKAELLMLYAARVQLVDTVIKPALAEGKWVIGDRHDLSSQAYQGGGREIDRQLMASLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    P  T+ LDLP ++GL+R ++R        LD  E++ +   E+ R  +L++A 
Sbjct: 124 LVLGGFKPALTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRARYLELAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
              +    +D++ + + V  +I
Sbjct: 178 AD-ESILTIDASQNIEQVQADI 198


>gi|28811733|dbj|BAC64665.1| putative thymidylate kinase [Streptococcus pyogenes SSI-1]
          Length = 232

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 22  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 81

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 82  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 197

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230


>gi|206900865|ref|YP_002250503.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12]
 gi|206739968|gb|ACI19026.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12]
          Length = 205

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 11/210 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + LFI+FEGI+G+GKTT   LLK +L+ K + V++TREPGGT      R +LLS    
Sbjct: 1   MKNSLFITFEGIDGSGKTTQAILLKDYLESKGFKVYLTREPGGTEVGSKIREILLSPDFS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E  ++ A+R+++   V++  L E  I++C+R+ DS+ AYQG   +     L  +
Sbjct: 61  -INPWTEVFLYLASRVENT-IVVKKKLEENYIVICERYADSTIAYQGYGRNLPLNILAEM 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+   + PD T+++DL  ++ L+R             D  E +    + + R+ +L+I
Sbjct: 119 NDIATSGLKPDLTVLIDLDPELALRR---------KKTFDRIEMEGKDFYYRVREGYLEI 169

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+ + +R  I+  + S + +   I+  + E
Sbjct: 170 AKREQERFIIIPGSLSKEEIFERIVKRIKE 199


>gi|150020819|ref|YP_001306173.1| dTMP kinase [Thermosipho melanesiensis BI429]
 gi|166223124|sp|A6LLI7|KTHY_THEM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|149793340|gb|ABR30788.1| dTMP kinase [Thermosipho melanesiensis BI429]
          Length = 199

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 11/204 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T + LL+++L  +   V   REPGGT   E  R +LL+  +++   
Sbjct: 1   MFIAFEGIDGSGKSTQLVLLEKYLINRGKKVIKVREPGGTILGEKIRDLLLNFNMNK--- 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE VIRP++ +G  +L DRF DSS AYQG   +     ++ L   +
Sbjct: 58  RSELLLFLASRAQLVEEVIRPSIEKGYFVLADRFSDSSIAYQGGARNLGKDLVEKLNIFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD    +D+PV + ++R++ +         D  E++     EK R  +L IA+++
Sbjct: 118 TNGIFPDIVFFIDIPVQMAVRRMKEKEK-------DRIEKEGEDFLEKVRTTYLHIAKSR 170

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            +   ++D       V + I  I+
Sbjct: 171 KN-FFVIDGTKDVDYVFSQIKRII 193


>gi|162139412|ref|YP_279788.2| thymidylate kinase [Streptococcus pyogenes MGAS6180]
          Length = 211

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|254247997|ref|ZP_04941318.1| Thymidylate kinase [Burkholderia cenocepacia PC184]
 gi|124872773|gb|EAY64489.1| Thymidylate kinase [Burkholderia cenocepacia PC184]
          Length = 206

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 15/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +  +R       R +A + D FE +      + R 
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFSRTRA 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A   P R  IVD+  S   +   +  ++
Sbjct: 171 EYLRRAEEAPHRFAIVDATRSIPEIRQQLERVL 203


>gi|304439671|ref|ZP_07399573.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371851|gb|EFM25455.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 202

 Score =  112 bits (281), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 10/210 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG +G GKTT + ++ + L+   Y V  TREPGGT  +E  R ++L    DE  
Sbjct: 3   GKFITFEGPDGCGKTTVVDMIYKKLESLGYRVIKTREPGGTDISEKIRDLILDVNNDEMS 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AA+R  H E  I P L +G I+LC+R++ SSYAYQG         + ++ + 
Sbjct: 63  PRCEALLYAASRAQHTEEKIVPYLNKGYIVLCERYILSSYAYQGYGRGLLEGVV-AINDF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + PD TI+L     +GL+R       +     D  E +    H+K  + + +IA+ 
Sbjct: 122 ATAGIRPDLTILLMGDYRVGLER-------KNEMGADRLELESTDFHKKVYKGYEEIAKY 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +     ++D+    ++V  N L  + E+++
Sbjct: 175 ED--VTVIDANSELETVFNNTLEKILEMIE 202


>gi|253688875|ref|YP_003018065.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259494276|sp|C6DKS8|KTHY_PECCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|251755453|gb|ACT13529.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 219

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT   ++   L+     +V  TREPGGTP AE  R ++     
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARHIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMT 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  V+NVI+PAL  G+ ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALANGQWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R + R        LD  E++ +   E+ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQESLAFFERTRSRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A  + D    +D++ S ++V+ +I
Sbjct: 174 ELA-AEDDSILTIDASQSIEAVSADI 198


>gi|71802080|gb|AAX71433.1| thymidylate kinase [Streptococcus pyogenes MGAS6180]
          Length = 253

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|307708576|ref|ZP_07645040.1| thymidylate kinase [Streptococcus mitis NCTC 12261]
 gi|307615325|gb|EFN94534.1| thymidylate kinase [Streptococcus mitis NCTC 12261]
          Length = 212

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLETLLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLNIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +  R   +D++   + V      ++++
Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFD 206


>gi|149010423|ref|ZP_01831794.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75]
 gi|168485884|ref|ZP_02710392.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00]
 gi|182683879|ref|YP_001835626.1| thymidylate kinase [Streptococcus pneumoniae CGSP14]
 gi|303254972|ref|ZP_07341051.1| thymidylate kinase [Streptococcus pneumoniae BS455]
 gi|303259845|ref|ZP_07345820.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293]
 gi|303262259|ref|ZP_07348203.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292]
 gi|303264681|ref|ZP_07350599.1| thymidylate kinase [Streptococcus pneumoniae BS397]
 gi|303267182|ref|ZP_07353049.1| thymidylate kinase [Streptococcus pneumoniae BS457]
 gi|303269430|ref|ZP_07355199.1| thymidylate kinase [Streptococcus pneumoniae BS458]
 gi|238691153|sp|B2IP90|KTHY_STRPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147764904|gb|EDK71833.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75]
 gi|182629213|gb|ACB90161.1| thymidylate kinase [Streptococcus pneumoniae CGSP14]
 gi|183570969|gb|EDT91497.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00]
 gi|302598052|gb|EFL65119.1| thymidylate kinase [Streptococcus pneumoniae BS455]
 gi|302636582|gb|EFL67073.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292]
 gi|302639050|gb|EFL69510.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293]
 gi|302641049|gb|EFL71427.1| thymidylate kinase [Streptococcus pneumoniae BS458]
 gi|302643297|gb|EFL73577.1| thymidylate kinase [Streptococcus pneumoniae BS457]
 gi|302645768|gb|EFL75997.1| thymidylate kinase [Streptococcus pneumoniae BS397]
          Length = 212

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLELHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|94987963|ref|YP_596064.1| thymidylate kinase [Streptococcus pyogenes MGAS9429]
 gi|94991847|ref|YP_599946.1| thymidylate kinase [Streptococcus pyogenes MGAS2096]
 gi|94541471|gb|ABF31520.1| thymidylate kinase [Streptococcus pyogenes MGAS9429]
 gi|94545355|gb|ABF35402.1| Thymidylate kinase [Streptococcus pyogenes MGAS2096]
          Length = 237

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 27  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 86

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 87  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 146

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 147 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 202

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 203 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 235


>gi|50902776|gb|AAT86491.1| Thymidylate kinase [Streptococcus pyogenes MGAS10394]
          Length = 253

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|161761322|ref|YP_059674.2| thymidylate kinase [Streptococcus pyogenes MGAS10394]
 gi|59798144|sp|Q5XDM2|KTHY_STRP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 211

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|330817241|ref|YP_004360946.1| Thymidylate kinase [Burkholderia gladioli BSR3]
 gi|327369634|gb|AEA60990.1| Thymidylate kinase [Burkholderia gladioli BSR3]
          Length = 206

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++     L+  +      V  TREPGGT   E+ R VLL 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFCEQLRAQVAASGRQVVQTREPGGTTLGESLRAVLLE 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A+R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QAMD---LETEALLMFASRREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD TI+ D+P ++  +R   R + R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTILFDVPPEVASER---RGAAR---APDKFEAESDAFFLRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVD++ S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFLIVDASQSIAQIQRQLEGVL 203


>gi|319946509|ref|ZP_08020745.1| thymidylate kinase [Streptococcus australis ATCC 700641]
 gi|319747340|gb|EFV99597.1| thymidylate kinase [Streptococcus australis ATCC 700641]
          Length = 212

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 110/213 (51%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  IS EG EGAGK++ +  L   L++       TREPGG   AE  R V+L     
Sbjct: 1   MKQGTLISIEGPEGAGKSSVLEALLPRLEKAGIAYITTREPGGVTIAEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         ++ L
Sbjct: 61  EMDPKTELLLYIASRRQHLAERVLPALEAGKLVIMDRFIDSSVAYQGFGRGLAVTDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + P+ T   D+ V+ GL R+    S RE   LD    + + +H+K RQ +L I
Sbjct: 121 NQFATDGLKPNRTFYFDIDVEEGLARIAKSAS-REVNRLDL---EGLSLHQKVRQGYLVI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +P R   +D++  F  V  +   +V E+++
Sbjct: 177 LEKEPQRVVKIDASQPFDKVVEDTWILVKEVLE 209


>gi|307328251|ref|ZP_07607429.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113]
 gi|306886085|gb|EFN17093.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113]
          Length = 1100

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI  EG +G+GK+T +  L  +++ K ++V VTREPG T   +  R +LL       
Sbjct: 508 TGFFIVIEGGDGSGKSTQVEALAEWIRAKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAATEIARISR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHQRVRSGFLALAA 679

Query: 183 NQPDRCHIVDSAHSFQSVAT 202
             P R  +VD+    ++V +
Sbjct: 680 ADPARYLVVDAGQLPEAVTS 699


>gi|15900815|ref|NP_345419.1| thymidylate kinase [Streptococcus pneumoniae TIGR4]
 gi|111658126|ref|ZP_01408824.1| hypothetical protein SpneT_02000692 [Streptococcus pneumoniae
           TIGR4]
 gi|148984675|ref|ZP_01817943.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|148988371|ref|ZP_01819818.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|148996974|ref|ZP_01824628.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70]
 gi|149002482|ref|ZP_01827416.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|149006392|ref|ZP_01830104.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74]
 gi|149019523|ref|ZP_01834842.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72]
 gi|168575597|ref|ZP_02721533.1| thymidylate kinase [Streptococcus pneumoniae MLV-016]
 gi|194397492|ref|YP_002037572.1| thymidylate kinase [Streptococcus pneumoniae G54]
 gi|225854440|ref|YP_002735952.1| thymidylate kinase [Streptococcus pneumoniae JJA]
 gi|225858732|ref|YP_002740242.1| thymidylate kinase [Streptococcus pneumoniae 70585]
 gi|237651112|ref|ZP_04525364.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974]
 gi|237821889|ref|ZP_04597734.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974M2]
 gi|307067591|ref|YP_003876557.1| thymidylate kinase [Streptococcus pneumoniae AP200]
 gi|307127513|ref|YP_003879544.1| thymidylate kinase [Streptococcus pneumoniae 670-6B]
 gi|23821803|sp|Q97R91|KTHY_STRPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690815|sp|B5E437|KTHY_STRP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808306|sp|C1C6R6|KTHY_STRP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808309|sp|C1CDT1|KTHY_STRZJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|14972410|gb|AAK75059.1| thymidylate kinase [Streptococcus pneumoniae TIGR4]
 gi|147756674|gb|EDK63714.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70]
 gi|147759419|gb|EDK66411.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|147762169|gb|EDK69131.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74]
 gi|147923066|gb|EDK74181.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|147926052|gb|EDK77126.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|147930898|gb|EDK81878.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72]
 gi|183578645|gb|EDT99173.1| thymidylate kinase [Streptococcus pneumoniae MLV-016]
 gi|194357159|gb|ACF55607.1| thymidylate kinase [Streptococcus pneumoniae G54]
 gi|225720178|gb|ACO16032.1| thymidylate kinase [Streptococcus pneumoniae 70585]
 gi|225723023|gb|ACO18876.1| thymidylate kinase [Streptococcus pneumoniae JJA]
 gi|301799917|emb|CBW32496.1| thymidylate kinase [Streptococcus pneumoniae OXC141]
 gi|306409128|gb|ADM84555.1| Thymidylate kinase [Streptococcus pneumoniae AP200]
 gi|306484575|gb|ADM91444.1| thymidylate kinase [Streptococcus pneumoniae 670-6B]
 gi|332075547|gb|EGI86015.1| thymidylate kinase [Streptococcus pneumoniae GA17545]
 gi|332076213|gb|EGI86679.1| thymidylate kinase [Streptococcus pneumoniae GA41301]
          Length = 212

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|301801780|emb|CBW34491.1| thymidylate kinase [Streptococcus pneumoniae INV200]
          Length = 212

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + +++H+K R+ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLVLHKKVRKGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|157363328|ref|YP_001470095.1| dTMP kinase [Thermotoga lettingae TMO]
 gi|157313932|gb|ABV33031.1| dTMP kinase [Thermotoga lettingae TMO]
          Length = 202

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ISFEGI+G+GK T + L   +L+ KN      REPGGT   E  R ++L  G  +   
Sbjct: 1   MLISFEGIDGSGKGTQLRLFLSYLKNKNLPYIHVREPGGTELGEILREIVLK-GQFQIYP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A+R   V  +I PAL E K+++ DRF+DSS  YQG         ++ L + +
Sbjct: 60  KAELLLFLASRAQLVSQIILPALKENKVVVADRFIDSSVVYQGVGRELGPELVEKLNDFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T  +D+PV+  LKR             D  E + +   +K R+ +L++AR +
Sbjct: 120 TDGLKPDLTFYIDVPVETALKR---------KRIFDRIESEGIEFLKKVRKAYLELARKE 170

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
             R  +++   + + + + I+ I  +L
Sbjct: 171 -KRIFLMNGEKAIEEIHSEIILIFEQL 196


>gi|50954227|ref|YP_061515.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|59798229|sp|Q6AGT5|KTHY_LEIXX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|50950709|gb|AAT88410.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 210

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 19/207 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +G GK+T  +LL+R+L      V  TREPGGT      R ++L    D   
Sbjct: 9   GLFITLEGGDGVGKSTQAALLERWLLGLGRAVVRTREPGGTDLGAEIREIVLHRRGD-IA 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  HV  V+RPAL  G+++L DR+LDSS AYQG   + + L    ++E+
Sbjct: 68  PRAEALLYAADRAHHVATVVRPALERGEVVLQDRYLDSSVAYQG---AGRVLDAGEVREL 124

Query: 124 SV---QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           S+   + ++PD TI+LDL       R+   + RY        D  E +    H + R  +
Sbjct: 125 SLWAAEGLLPDLTILLDLDETTARARLGSARTRY--------DRLEAERSEFHARVRAAY 176

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L +A  +P R  +VD++   + +A  I
Sbjct: 177 LALA-AEPQRFLVVDASRPVEEIAAEI 202


>gi|296535552|ref|ZP_06897734.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957]
 gi|296264138|gb|EFH10581.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957]
          Length = 177

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 6/163 (3%)

Query: 38  TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
           TREPGG P AEA R +LLS GV  +   AEA++  AAR +H    IRPAL  G  ++CDR
Sbjct: 5   TREPGGAPGAEALRGLLLSGGV-AWDPVAEAMLMFAARREHWVKTIRPALAAGIWVVCDR 63

Query: 98  FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           F DS+ AYQ             L+++++ EV PD T++LDLP + G+ R  +R      A
Sbjct: 64  FADSTLAYQCHGHGLDAAIWRQLKQVALGEVAPDATLVLDLPPERGMARALSR-----GA 118

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
             D  E      H +    F  IA  +P RC ++D+A    SV
Sbjct: 119 APDRIESLGSAFHARVNAAFRSIAEAEPQRCALLDAALPPDSV 161


>gi|89074515|ref|ZP_01160987.1| putative thymidylate kinase [Photobacterium sp. SKA34]
 gi|89049619|gb|EAR55178.1| putative thymidylate kinase [Photobacterium sp. SKA34]
          Length = 209

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 9/203 (4%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           G FI  EG+EGAGK+T I  ++    Q   +    TREPGGTP AE  R ++     DE 
Sbjct: 3   GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHAPASTREPGGTPLAEQMRALVKEGHPDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR+  V+NVI+PAL +G  ++ DR   SS AYQG         +++L+
Sbjct: 63  LTDMAELLLLYAARIQLVDNVIKPALNQGLWVVGDRHDMSSQAYQGGGRGFDRALMENLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI +D+  ++GL+R + R        LD  E+ ++    + R  FL+++
Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRARARFLELS 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
            NQP+   IVD++ S + V  ++
Sbjct: 177 ENQPN-VIIVDASQSLEKVTEDL 198


>gi|269102268|ref|ZP_06154965.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162166|gb|EEZ40662.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 209

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 9/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI  EG+EGAGK+T IS +   L     +D   TREPGGTP AE  R ++     DE
Sbjct: 2   NGKFIVIEGLEGAGKSTAISQVINVLAEHGIHDPVATREPGGTPLAEQMRALVKEGHPDE 61

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++  AAR+  V+NVI+PAL +G+ ++ DR   SS AYQG     +   + +L
Sbjct: 62  PLTDMAELLLLYAARIQLVDNVIKPALAQGRWVVGDRHDMSSQAYQGGGRGFEQQLMMNL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   + +  PD TI +D+   +GL+R + R        LD  E+ ++    + R  FL++
Sbjct: 122 RNTVLGDFCPDFTIYMDIDPALGLQRARGR------GALDRIEQMNIDFFHRARARFLEL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +   P+   I+D++ S ++V  +I + + + ++++
Sbjct: 176 SEQDPNTV-IIDASQSLEAVTADISSALTQWLEQQ 209


>gi|269959145|ref|YP_003328934.1| thymidylate kinase [Anaplasma centrale str. Israel]
 gi|269848976|gb|ACZ49620.1| thymidylate kinase [Anaplasma centrale str. Israel]
          Length = 211

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 17/218 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEG++G GKTT  +LL ++L      + V +TREPGGT   E  R VLL     + 
Sbjct: 1   MFITFEGVDGCGKTTQAALLAKYLSDLYGEHRVVLTREPGGTSFNELVREVLLGLTDYKM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GK+++ DRF DS+ AYQG         ++ L  
Sbjct: 61  DRITELMLFMAMRRESFVKVVSPGLLAGKVVISDRFTDSTVAYQGYGCGVDLSLVNMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V +V+PD T ++D+  ++ L R            L+  E +    ++K R+ F  I  
Sbjct: 121 L-VADVVPDITFVMDISTELALTRTT----------LNGCESRSPEFYDKVREGFRAIVA 169

Query: 183 NQPDRCHIV----DSAHSFQSVATNILNIVWELVQKRV 216
           + P RCH+V    DS     SV   I+ +  E+ + ++
Sbjct: 170 SNPHRCHMVNCAEDSVEDVYSVHDRIVALFHEVTKDKL 207


>gi|84393882|ref|ZP_00992625.1| thymidylate kinase [Vibrio splendidus 12B01]
 gi|84375479|gb|EAP92383.1| thymidylate kinase [Vibrio splendidus 12B01]
          Length = 210

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 17/210 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+     D+  TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKAAGVADIVNTREPGGTVLAEKMRSLV----K 56

Query: 60  DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +E   E      E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG       
Sbjct: 57  EEHEGEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             ++SL+E ++    PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R
Sbjct: 117 TTMESLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           + +L+IA  Q D   ++++    + VA +I
Sbjct: 171 ERYLEIA-GQDDSVLVINAQQEIEQVAADI 199


>gi|296284126|ref|ZP_06862124.1| thymidylate kinase [Citromicrobium bathyomarinum JL354]
          Length = 215

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 108/214 (50%), Gaps = 13/214 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG GK+T    L   L     D  +TREPGGT  AE  R +LL      +  +
Sbjct: 10  FIAFEGGEGVGKSTQAKRLVEALSNHGIDALLTREPGGTTGAEMIRKLLLEPPGTGWRVQ 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AEA++FAAAR DHV   I+PALM G+ ++CDRF+ SS AYQG         + +L +I  
Sbjct: 70  AEALLFAAARSDHVAKAIKPALMAGRWVVCDRFVLSSRAYQGLAGGLGDEEVRTLHQIGS 129

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P  TI+L+ P D     V  R   R+    D    ++   H    + F  +A++  
Sbjct: 130 GGLQPCRTILLEAPGD----DVAERLRKRDGGEADAIGGRNARYHADVARGFAGLAQDD- 184

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           D    +D++ S         + V E V + ++PL
Sbjct: 185 DTIVQIDASGS--------ADAVHEAVMRELAPL 210


>gi|289167781|ref|YP_003446050.1| thymidylate kinase [Streptococcus mitis B6]
 gi|288907348|emb|CBJ22185.1| thymidylate kinase [Streptococcus mitis B6]
          Length = 212

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LEKEGNRIVKIDASFPLEQVVETTKAVLFD 206


>gi|121607993|ref|YP_995800.1| dTMP kinase [Verminephrobacter eiseniae EF01-2]
 gi|166223126|sp|A1WGM5|KTHY_VEREI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|121552633|gb|ABM56782.1| thymidylate kinase [Verminephrobacter eiseniae EF01-2]
          Length = 226

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 14/172 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEGI+GAGK++H+  L    + +   V V+REPGGTP AE  R +LL+  +D   
Sbjct: 5   GLFISFEGIDGAGKSSHVEGLAAAFRAQGRRVTVSREPGGTPLAEKLRALLLAERMD--- 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E+++  AAR DH+  VI PAL  G ++LCDRF DS++AYQG      H  L  L+ +
Sbjct: 62  ALTESLLIFAARRDHLRQVIEPALARGDVVLCDRFTDSTFAYQGAGRGFDHETLSILERM 121

Query: 124 SVQEVM--------PDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFER 164
           +             P+ T+  DL  ++  +R+     R    E+  +++F R
Sbjct: 122 TNTAAAHKDGLLPEPELTLWFDLAPELAAERMAGAAHRPDRFEAQPVEFFRR 173


>gi|50120735|ref|YP_049902.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043]
 gi|59798244|sp|Q6D683|KTHY_ERWCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49611261|emb|CAG74707.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043]
          Length = 219

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT  +++   L+     +V  TREPGGTP AE  R ++     
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKEVLFTREPGGTPLAEKLRELIKQGMA 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  +    PD T+ LDLP  IGL+R + R        LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGNFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRTRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
            +A  + D    +D++ S  +V+ +I
Sbjct: 174 ALA-AEDDSILTIDASQSIDAVSADI 198


>gi|15902879|ref|NP_358429.1| thymidylate kinase [Streptococcus pneumoniae R6]
 gi|116516561|ref|YP_816308.1| thymidylate kinase [Streptococcus pneumoniae D39]
 gi|46576561|sp|Q8DQ58|KTHY_STRR6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122278806|sp|Q04KZ0|KTHY_STRP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|15458437|gb|AAK99639.1| Thymidylate kinase [Streptococcus pneumoniae R6]
 gi|116077137|gb|ABJ54857.1| thymidylate kinase [Streptococcus pneumoniae D39]
          Length = 212

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD  E  D  +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
              + +R   +D++   + V
Sbjct: 177 LDKEGNRIVKIDASLPLEQV 196


>gi|168494363|ref|ZP_02718506.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06]
 gi|221231705|ref|YP_002510857.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669]
 gi|254808307|sp|B8ZP37|KTHY_STRPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|183575667|gb|EDT96195.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06]
 gi|220674165|emb|CAR68688.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669]
          Length = 212

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILKEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD  E  D  +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|257066619|ref|YP_003152875.1| thymidylate kinase [Anaerococcus prevotii DSM 20548]
 gi|256798499|gb|ACV29154.1| thymidylate kinase [Anaerococcus prevotii DSM 20548]
          Length = 209

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I FEG +G+GKTT I+ +K+ L++   +    REPGGTP +E  R +++    ++ 
Sbjct: 2   TGKLIVFEGPDGSGKTTVINEVKKRLKKDQIEYLDFREPGGTPISEKIREIIIDNDNEDM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  E ++FAA+R   +E  IRPAL +GK+++CDRF+ SS  YQG         +  + +
Sbjct: 62  TSRCECLLFAASRAQLIEEKIRPALEKGKLVICDRFVLSSLLYQGVGRGLGIEKVKVIND 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +    D TI  D+     L R +  +S       D  E +D   H K    +LDI  
Sbjct: 122 FATENTKADLTIFFDIDYKTALVRKRANFS------ADRLESEDFDFHRKIFDAYLDITE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              D    VD+  S   V   ++ ++++ +++
Sbjct: 176 RYKDEIKRVDATKSIDEVTDQVMELIYKSLEE 207


>gi|123441946|ref|YP_001005929.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|166223129|sp|A1JN89|KTHY_YERE8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122088907|emb|CAL11714.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 212

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58

Query: 60  DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           D      +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL++  + E  PD T+ LDLP  IGL R + R        LD  E++ +   E+ R+ +
Sbjct: 119 TSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           L++A         +D++   + V+ +I  ++ + +  R
Sbjct: 173 LELAATDSS-IKTIDASQPLEQVSESISQVLKQWLTSR 209


>gi|268589221|ref|ZP_06123442.1| dTMP kinase [Providencia rettgeri DSM 1131]
 gi|291315477|gb|EFE55930.1| dTMP kinase [Providencia rettgeri DSM 1131]
          Length = 209

 Score =  112 bits (279), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62
           FI  EG+EGAGKTT I+ +   L +    D+  TREPGGTP AE  R  L+  G+  D+ 
Sbjct: 5   FIVIEGLEGAGKTTAINTVVETLNQAGITDIVFTREPGGTPLAEKLRE-LIKQGIAGDKV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQ 121
             +AE ++  AAR+  V+ VI+PAL  GK ++ DR   SS AYQG  R+  +HL + SL+
Sbjct: 64  TDKAELLMLYAARVQLVDTVIQPALAAGKWVVGDRHDLSSQAYQGGGREIDRHL-MQSLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ + +  P  T+ LDLP ++GL+R ++R        LD  E++ +   E+ R  +L++A
Sbjct: 123 DLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRSRYLELA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
               +    +D++ + + V  +I
Sbjct: 177 AGD-ETILTIDASQNIEQVQQDI 198


>gi|148992933|ref|ZP_01822552.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|168483004|ref|ZP_02707956.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00]
 gi|168490250|ref|ZP_02714449.1| thymidylate kinase [Streptococcus pneumoniae SP195]
 gi|147928385|gb|EDK79401.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|172043528|gb|EDT51574.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00]
 gi|183571397|gb|EDT91925.1| thymidylate kinase [Streptococcus pneumoniae SP195]
 gi|332073266|gb|EGI83745.1| thymidylate kinase [Streptococcus pneumoniae GA17570]
          Length = 212

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|83719414|ref|YP_442675.1| thymidylate kinase [Burkholderia thailandensis E264]
 gi|167581613|ref|ZP_02374487.1| thymidylate kinase [Burkholderia thailandensis TXDOH]
 gi|167619729|ref|ZP_02388360.1| thymidylate kinase [Burkholderia thailandensis Bt4]
 gi|257138888|ref|ZP_05587150.1| thymidylate kinase [Burkholderia thailandensis E264]
 gi|123536877|sp|Q2SWM4|KTHY_BURTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|83653239|gb|ABC37302.1| thymidylate kinase [Burkholderia thailandensis E264]
          Length = 206

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+P  I   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPQIASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A+  P R  IVDS+     +   +  ++
Sbjct: 172 YLRRAQEAPHRFVIVDSSEPIAQIRKQLEGVL 203


>gi|255021134|ref|ZP_05293186.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756]
 gi|254969394|gb|EET26904.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756]
          Length = 217

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G F++ EGIEGAGK+T +  ++R+   + + V +TREPGG P  EA R + L  G++ 
Sbjct: 9   RTGFFVTLEGIEGAGKSTALPFVQRYCMDRGWSVEITREPGGGPLGEALRAIFLDPGLEL 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   +++ A R +H+   I PAL  G ++LCDRF DS++AYQG   +     + SL 
Sbjct: 69  SVEEELLLLY-AGRHEHLRRKILPALQRGALVLCDRFEDSTFAYQGGGRAFPIERIQSLS 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     PD T+  D+   IG +R++ R         D  ER+ +   E+ R+++    
Sbjct: 128 RWTRLPRSPDLTLWFDVDPAIGAERIRARNP-------DRLERESLEFFERARRVYAARM 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P R   + +  +   V   + +++ E +
Sbjct: 181 AAEPRRYRRICANGTLAEVEQQLASVLAECL 211


>gi|121604849|ref|YP_982178.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2]
 gi|120593818|gb|ABM37257.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2]
          Length = 260

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 29/226 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFISFEGI+GAGK+THI+ L    Q +   V +TREPGGT  AE  R+++L   +D 
Sbjct: 31  SQGLFISFEGIDGAGKSTHIAGLADAFQSEGRAVTLTREPGGTLLAEKLRNMVLDDAMDP 90

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-------------E 108
                E+++  AAR DH+  VI PAL+ G ++LCDRF D+++AYQG             E
Sbjct: 91  L---TESLLIFAARRDHLVRVIAPALLRGDVVLCDRFTDATFAYQGAGRGFDVKVLATLE 147

Query: 109 R--DSSQHLFLDSLQEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           R   S + L  D      ++      + P  T+  DLP +    R      L +S   D 
Sbjct: 148 RWVQSGEGLLGDPAGNQPMKPEVETVIEPHLTVWFDLPPEEAALR------LADSRVPDR 201

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
           FE + V    +  + + +     P+R   +D++ + ++V   I  +
Sbjct: 202 FESQPVEFFRRVARGYAERQLGHPERFARIDASQNREAVWQGIRQV 247


>gi|19745549|ref|NP_606685.1| thymidylate kinase [Streptococcus pyogenes MGAS8232]
 gi|139474335|ref|YP_001129051.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo]
 gi|23821763|sp|Q8P2B1|KTHY_STRP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223120|sp|A2RG70|KTHY_STRPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|19747670|gb|AAL97184.1| putative thymidylate kinase [Streptococcus pyogenes MGAS8232]
 gi|134272582|emb|CAM30849.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo]
          Length = 211

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L+    Q+   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPPLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+ N    RE   LD    + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|307704911|ref|ZP_07641802.1| thymidylate kinase [Streptococcus mitis SK597]
 gi|307621525|gb|EFO00571.1| thymidylate kinase [Streptococcus mitis SK597]
          Length = 212

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALETGKLVIMDRFIDSSLAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIVAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +  R   +D++   + V      ++++
Sbjct: 177 LDKEGSRIVKIDASLPLEQVVETTKAVLFD 206


>gi|291298371|ref|YP_003509649.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
 gi|290567591|gb|ADD40556.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
          Length = 707

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 19/208 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F+ FEG EG+GK+T    L  +L+++ ++V +TREPG T      R +LL     E G
Sbjct: 469 GTFVVFEGGEGSGKSTQAVKLAAWLRQRGHEVVLTREPGATELGVRIRTLLLD---PESG 525

Query: 64  A----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  EA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG   S + L  D 
Sbjct: 526 TSPSPRTEALLYAADRAQHVSKVVRPALDRGAVVISDRYVDSSLAYQG---SGRELPADE 582

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +S      + PD  ++LD+   +GL R        + +  D  E++ +  HE  R+ 
Sbjct: 583 VAWLSHWATGGLKPDLVVLLDIDPRVGLVRAT------KGSAGDRLEQEALTFHEAVREK 636

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204
           F D+A +   R  +VD+  S + +A  +
Sbjct: 637 FRDLAADDSSRYLVVDATQSPEDIAAKV 664


>gi|307701598|ref|ZP_07638615.1| dTMP kinase [Mobiluncus mulieris FB024-16]
 gi|307613277|gb|EFN92529.1| dTMP kinase [Mobiluncus mulieris FB024-16]
          Length = 238

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58
           G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G     
Sbjct: 23  GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 82

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117
             +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+ RD       
Sbjct: 83  EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 142

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D L   +   + P+ T++LDL  +I  +R QN  +       D  E + +    K R  F
Sbjct: 143 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMESEGLEFQRKVRARF 198

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             +A  + +   +VD++ + + +A  +
Sbjct: 199 RRLA-EENETWMVVDASLAPEEIAAQV 224


>gi|294671092|ref|ZP_06735947.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307200|gb|EFE48443.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 207

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 111/199 (55%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ +GI+G+GK+TH+  ++ + +R+   V  TREPGGTP  E  R +LLS      G  
Sbjct: 5   FLTLDGIDGSGKSTHLETMREWFERRGMPVLFTREPGGTPLGEELRRLLLSPD-SRVGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  TETLLMFAARRQHLEDVILPALDKGIHVVSDRFTDATFAYQGGGRGIPAADIEVLENWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P+ T++LD+P+++  +R+        S   D FE+++     + R+ +LD A   P
Sbjct: 124 GSLRPNLTLLLDVPLEVSFERIAR------SREKDRFEQEEAEFFARVRRAYLDRAAAHP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
            R  ++DS  S + V   +
Sbjct: 178 QRYRVIDSNRSREEVRAAV 196


>gi|51473864|ref|YP_067621.1| thymidylate kinase [Rickettsia typhi str. Wilmington]
 gi|59798217|sp|Q68W53|KTHY_RICTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|51460176|gb|AAU04139.1| TMPK [Rickettsia typhi str. Wilmington]
          Length = 203

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 16/216 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG++G GK+T   +L  +L+ +   V +TRE GGT  AE  R +L+    +
Sbjct: 4   LTQGKFITFEGMDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTFVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL +G I++CDRF+DS+  YQG    +    + SL
Sbjct: 61  ELLPMSELLQAMAARYDHMVRKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLVYSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +  +MPD T  +D+  D  +KRV +R         + F+R+ +  ++K    F ++
Sbjct: 121 HTTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMSNKFDRRRIDFYKKIYSCFQEL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +   P+R   + ++H       N L  V EL+QK +
Sbjct: 175 SHRFPERIKTIKASH------LNPLE-VHELIQKHL 203


>gi|317495399|ref|ZP_07953768.1| thymidylate kinase [Gemella moribillum M424]
 gi|316914458|gb|EFV35935.1| thymidylate kinase [Gemella moribillum M424]
          Length = 208

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 115/206 (55%), Gaps = 9/206 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG +G+GKTT I+    +L +K Y V  TREPGGT  +E  R +L     +E  
Sbjct: 3   GKFITVEGSDGSGKTTFINSATEYLIKKGYKVITTREPGGTVFSEKVRELLFDSS-NEID 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
           A+ E+++F  +R DH+   I P + EG I++CDRF+DSS AYQ   R  ++   +D + +
Sbjct: 62  AKTESLLFCVSRRDHIIKKIIPYVEEGYIVICDRFVDSSIAYQSYGRGLNKQDIID-INK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+  ++ V+IGL R + R    E+  +D    + +  ++  ++ + +++ 
Sbjct: 121 YTTDGLEPDLTLYFNVDVEIGLSRTKGR---DENNRMD---NESLKFYKDVKRGYDELSN 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +   R  ++D+   ++ V  +   I+
Sbjct: 175 DYKKRIKVIDANQDYEKVEKDAFKIL 200


>gi|119714651|ref|YP_921616.1| thymidylate kinase [Nocardioides sp. JS614]
 gi|119535312|gb|ABL79929.1| thymidylate kinase [Nocardioides sp. JS614]
          Length = 222

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 17/218 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G+F+  EG EG+GK+T   LL+ +L+ + ++V +T EPG T      R ++LS     
Sbjct: 15  DTGVFVCLEGGEGSGKSTQSGLLRDWLETQGFEVLLTFEPGDTEVGRKLRAIVLSPETGA 74

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA + +HV+ V++PAL  G +++ DR++ S  AYQG   +     ++ + 
Sbjct: 75  ISDRTEALLYAADKAEHVDTVVQPALDRGAVVITDRYVASMLAYQGAGRALDVGEVEQVA 134

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +  ++ P  T++LDL  + GL R + R         D  E + V  H + R+ FL +A
Sbjct: 135 RWATHDLRPHLTVVLDLEPEHGLGRFEER---------DRIEGESVEFHRRVREGFLGMA 185

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
              PD   ++D+    + +A          V+ RV+PL
Sbjct: 186 AADPDHYLVLDARGDREEIAGR--------VRDRVAPL 215


>gi|306817710|ref|ZP_07451452.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
 gi|304649524|gb|EFM46807.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
          Length = 246

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58
           G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G     
Sbjct: 31  GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 90

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117
             +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+ RD       
Sbjct: 91  EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 150

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D L   +   + P+ T++LDL  +I  +R QN  +       D  E + +    K R  F
Sbjct: 151 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMEGEGLEFQRKVRARF 206

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             +A    +   +VD++ + + +A  +
Sbjct: 207 RRLAEGN-ETWMVVDASLAPEEIAAQV 232


>gi|269976291|ref|ZP_06183287.1| thymidylate kinase [Mobiluncus mulieris 28-1]
 gi|269935620|gb|EEZ92158.1| thymidylate kinase [Mobiluncus mulieris 28-1]
          Length = 246

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58
           G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G     
Sbjct: 31  GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 90

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117
             +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+ RD       
Sbjct: 91  EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 150

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D L   +   + P+ T++LDL  +I  +R QN  +       D  E + +    K R  F
Sbjct: 151 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMEGEGLEFQRKVRARF 206

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             +A  + +   +VD++ + + +A  +
Sbjct: 207 RRLA-EENETWMVVDASLTPEEIAAQV 232


>gi|254415334|ref|ZP_05029095.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420]
 gi|196177809|gb|EDX72812.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420]
          Length = 213

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-------NY----DVHVTREPGGTPAAEAARHV 53
           + I FEG+EG+GKTT I   + +           NY     V +TREPGGT      R +
Sbjct: 1   MLIVFEGVEGSGKTTQIQRSRDWFLSSGILDTLGNYHKPPPVIITREPGGTALGIKLRQL 60

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           LL           E +++AA R  HVE +++P L  G I+LCDR+ DS+ AYQG      
Sbjct: 61  LLQEQSSSLQHRTELLLYAADRSQHVEELLQPQLDAGAIILCDRYTDSTIAYQGYGRGID 120

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              ++ +  I+   +  D T+ LD+ V IGL+R       RE    D  E+ ++  H++ 
Sbjct: 121 LALIEQINHIATGGLESDLTLWLDVDVTIGLQRA------RERGVADRMEQAELTFHQRV 174

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           +Q F  +A   P R   +D+  S ++V  +I
Sbjct: 175 QQGFAQLASQHPQRIVRIDANQSPEAVQRDI 205


>gi|222474809|ref|YP_002563224.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida]
 gi|255002779|ref|ZP_05277743.1| thymidylate kinase [Anaplasma marginale str. Puerto Rico]
 gi|255003913|ref|ZP_05278714.1| thymidylate kinase [Anaplasma marginale str. Virginia]
 gi|254808273|sp|B9KHK6|KTHY_ANAMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|222418945|gb|ACM48968.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida]
          Length = 211

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G GKTT   LL ++L      + V +TREPGGT   E  R  LL     + 
Sbjct: 1   MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GKI++ DRF DS+ AYQG         +  L  
Sbjct: 61  DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V +V+PD T ++D  +++ L R            L+ FE      +++ R+ F  I  
Sbjct: 121 L-VADVVPDITFVIDASIELALARTS----------LNGFENHGPEFYDRVREGFRTIVA 169

Query: 183 NQPDRCHIVD 192
           N P RCH++D
Sbjct: 170 NNPHRCHMID 179


>gi|119509052|ref|ZP_01628203.1| Thymidylate kinase [Nodularia spumigena CCY9414]
 gi|119466218|gb|EAW47104.1| Thymidylate kinase [Nodularia spumigena CCY9414]
          Length = 207

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 8/209 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI FEG+EG GKT+ + L  ++LQ     V VTREPGGT      R +LL    ++ 
Sbjct: 2   AGKFIVFEGVEGCGKTSQMQLCCQWLQNLGISVVVTREPGGTELGLHLRRLLLEKVENQP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            AE  E +++AA R  HVE  ++P L  GK +LCDR+ DS+ AYQG   +     ++ L 
Sbjct: 62  IAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTTAYQGYGRALNMSLINQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+   +  D TI LD+ V++GL R Q           D  E++ +  H + +Q + ++A
Sbjct: 122 YIATAGLESDLTIWLDVDVEVGLARKQGDK-------FDRIEQETIDFHRRVQQGYSELA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + P R   VD + S  +V   I  I+ E
Sbjct: 175 ASYPSRIIRVDGSLSQAAVQEIIQEILRE 203


>gi|56416439|ref|YP_153513.1| thymidylate kinase [Anaplasma marginale str. St. Maries]
 gi|81599204|sp|Q5PBS1|KTHY_ANAMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56387671|gb|AAV86258.1| thymidylate kinase [Anaplasma marginale str. St. Maries]
          Length = 211

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G GKTT   LL ++L      + V +TREPGGT   E  R  LL     + 
Sbjct: 1   MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GKI++ DRF DS+ AYQG         +  L  
Sbjct: 61  DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V +V+PD T ++D  +++ L R            L+ FE      +++ R+ F  I  
Sbjct: 121 L-VADVVPDITFVIDASIELALARTS----------LNGFENHGPEFYDRVREGFRTIVA 169

Query: 183 NQPDRCHIVD 192
           N P RCH++D
Sbjct: 170 NNPHRCHMID 179


>gi|257064315|ref|YP_003143987.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476]
 gi|256791968|gb|ACV22638.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476]
          Length = 234

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 15/217 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G+FI+FEG EGAGK+THI+ L + L+   ++V   REPG T   E  R V+L     E
Sbjct: 7   HTGVFITFEGGEGAGKSTHINFLAQTLEACGFEVVRVREPGSTRIGEQLRGVVLDPENAE 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  ++ AAR   V   I+PAL  G I+LCDRF DS+ AYQG     + L LD ++
Sbjct: 67  MADWTELFIYEAARAQLVAEAIKPALERGAIVLCDRFTDSTLAYQG---YGRGLELDRVR 123

Query: 122 ---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E++ Q ++PD T+++  P       ++  Y   +    D  E      H +  Q F+
Sbjct: 124 RANELACQGIVPDATVLMVAP-----NALEGLYRATKDDGADRLESAGHDFHVRVNQAFV 178

Query: 179 DIARNQPDRCHIVDSAH----SFQSVATNILNIVWEL 211
           ++A     R  +V SA     + QSV   + +++ +L
Sbjct: 179 ELAAQSKKRIRMVQSASAKSLTSQSVFKALADVLPQL 215


>gi|71894076|ref|YP_278184.1| thymidylate kinase [Mycoplasma synoviae 53]
 gi|123644541|sp|Q4A6Z8|KTHY_MYCS5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71850864|gb|AAZ43473.1| thymidylate kinase [Mycoplasma synoviae 53]
          Length = 214

 Score =  111 bits (278), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 13/208 (6%)

Query: 5   LFISFEGIEGAGKTTHIS-LLKRFLQR-KNYDVHVTREPGGT--PAAEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT I+ LLK+     K  D  +TREPGG     +E  R ++L   + 
Sbjct: 1   MFITFEGLDGSGKTTVINELLKKLKDNFKFLDYVLTREPGGKDIKESEKIREMILDSDL- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           EF    EA+++  +R  H++ VI PAL + KI+ CDR+ DS YAYQG   +    F  +L
Sbjct: 60  EFSPITEALLYTTSRRIHIDKVILPALAQNKIVFCDRYYDSFYAYQGYGRNLGMEFTKTL 119

Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            E++V + +P+ T   D+ P +   +R +N      +   D  E +D+  H +  + +L+
Sbjct: 120 TELAVGKTIPNLTFFFDISPFETRKRRSEN------NLINDRLELEDLSFHNRVYEGYLE 173

Query: 180 IAR-NQPDRCHIVDSAHSFQSVATNILN 206
           I + N+ +R  +VD+      +   I N
Sbjct: 174 IIKNNKENRFVVVDATKPVNEIVDFIFN 201


>gi|157961746|ref|YP_001501780.1| thymidylate kinase [Shewanella pealeana ATCC 700345]
 gi|157846746|gb|ABV87245.1| dTMP kinase [Shewanella pealeana ATCC 700345]
          Length = 214

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59
            S  FI  EG+EGAGK++ I+L++ F+++      + TREPGGTP AE  R ++ ++   
Sbjct: 9   QSAKFIVIEGLEGAGKSSAIALVRDFIEKHTGKAPICTREPGGTPLAEQMRDLVKIANES 68

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++F AAR   V NVI+PAL  G+ +L DR   SS AYQG       L + +
Sbjct: 69  DPLCDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRKLMPL-VSA 127

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +++   PD T+ LD+   +GL+R   R        LD  E++++   ++ R  FL 
Sbjct: 128 ISDATLKGFKPDLTLYLDIDPKLGLERAARRGE------LDRIEQQEIEFFKRTRATFLS 181

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            A +  +   IVD++ S   V  +I+ ++ E
Sbjct: 182 FA-DADESIKIVDASQSMAEVHKDIIALLQE 211


>gi|51596788|ref|YP_070979.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953]
 gi|153946978|ref|YP_001400560.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758]
 gi|186895859|ref|YP_001872971.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+]
 gi|59798199|sp|Q669L8|KTHY_YERPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166987710|sp|A7FH32|KTHY_YERP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238691421|sp|B2K751|KTHY_YERPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|51590070|emb|CAH21704.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953]
 gi|152958473|gb|ABS45934.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758]
 gi|186698885|gb|ACC89514.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+]
          Length = 212

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58

Query: 60  DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           D      +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL++  + E  PD T+ LDLP  +GL R + R        LD  E++ +   E+ R  +
Sbjct: 119 ASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L++A +       +D++   + V+ +I
Sbjct: 173 LELAASDAS-IKTIDASQPIEQVSASI 198


>gi|168491022|ref|ZP_02715165.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04]
 gi|183574610|gb|EDT95138.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04]
          Length = 212

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|190573065|ref|YP_001970910.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a]
 gi|190010987|emb|CAQ44596.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a]
          Length = 221

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 16/215 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDE 61
           F+S EG EGAGKTT I+ ++  L+   ++V +TREPGGTP AE  R ++L        + 
Sbjct: 11  FVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AEAE ++  AAR  HV  VI+PAL  G  +L DRF DSSYAYQG        ++  L+
Sbjct: 71  LSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADLE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178
             +V  +    T++LD+ V +G  R   R  +  R ES   D+F+R         R++F 
Sbjct: 131 RRAVGLLP-GLTLLLDVDVAVGRARANGRDLWPDRIESEQDDFFQRV--------REVFR 181

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             A+  P R  ++D+      VA +++  V   +Q
Sbjct: 182 SRAQQDPQRFALIDAGQEQARVAADVVARVERWLQ 216


>gi|227876763|ref|ZP_03994872.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|227842660|gb|EEJ52860.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
          Length = 246

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58
           G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G     
Sbjct: 31  GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 90

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117
             +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+ RD       
Sbjct: 91  EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 150

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D L   +   + P+ T++LDL  +I  +R QN  +       D  E + +    K R  F
Sbjct: 151 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMEGEGLEFQRKVRARF 206

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             +A  + +   +VD++ + + +A  +
Sbjct: 207 RRLA-EENETWMVVDASLAPEEIAAQV 232


>gi|194364655|ref|YP_002027265.1| dTMP kinase [Stenotrophomonas maltophilia R551-3]
 gi|194347459|gb|ACF50582.1| dTMP kinase [Stenotrophomonas maltophilia R551-3]
          Length = 221

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 116/215 (53%), Gaps = 16/215 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDE 61
           F+S EG EGAGKTT I+ ++  L+   ++V +TREPGGTP AE  R ++L        + 
Sbjct: 11  FVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AEAE ++  AAR  HV  VI+PAL  G  +L DRF DSSYAYQG        ++  L+
Sbjct: 71  LSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDLQWIADLE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178
             +V  +    T++LD+ V +G  R   R  +  R ES   D+F+R         R++F 
Sbjct: 131 RRAVGLLP-GLTLLLDVEVAVGRARANGRDLWPDRIESEQDDFFQRV--------REVFR 181

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             A+  P R  ++D+    + VA +++  V   +Q
Sbjct: 182 SRAQQDPQRFALIDAGQVQERVAADVVACVERWLQ 216


>gi|225856597|ref|YP_002738108.1| thymidylate kinase [Streptococcus pneumoniae P1031]
 gi|254808310|sp|C1CK20|KTHY_STRZP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225725389|gb|ACO21241.1| thymidylate kinase [Streptococcus pneumoniae P1031]
 gi|301794077|emb|CBW36481.1| thymidylate kinase [Streptococcus pneumoniae INV104]
          Length = 212

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD  E  D  +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|12044856|ref|NP_072666.1| thymidylate kinase [Mycoplasma genitalium G37]
 gi|255660021|ref|ZP_05405430.1| thymidylate kinase [Mycoplasma genitalium G37]
 gi|1351454|sp|P47252|KTHY_MYCGE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1045674|gb|AAC71222.1| thymidylate kinase [Mycoplasma genitalium G37]
 gi|166078870|gb|ABY79488.1| thymidylate kinase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 210

 Score =  111 bits (277), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 11/155 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN G+F+  EG++GAGKT  I   K+    K  NY +  TREPGGT  AE  R +LL+  
Sbjct: 1   MNKGVFVVIEGVDGAGKTALIEGFKKLYPTKFLNYQLTYTREPGGTLLAEKIRQLLLNET 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           ++      EA +FAAAR +H+  +I+PA+ + ++++ DRF+ SS+AYQG    S+ + +D
Sbjct: 61  MEPL---TEAYLFAAARTEHISKLIKPAIEKEQLVISDRFVFSSFAYQG---LSKKIGID 114

Query: 119 SLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNR 150
           ++++I   +++ +MP+ T ILD      L+R+Q R
Sbjct: 115 TVKQINHHALRNMMPNFTFILDCNFKEALQRMQKR 149


>gi|254994671|ref|ZP_05276861.1| thymidylate kinase [Anaplasma marginale str. Mississippi]
          Length = 211

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +F++FEGI+G GKTT   LL ++L      + V +TREPGGT   E  R  LL     + 
Sbjct: 1   MFVTFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GKI++ DRF DS+ AYQG         +  L  
Sbjct: 61  DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V +V+PD T ++D  +++ L R            L+ FE      +++ R+ F  I  
Sbjct: 121 L-VADVVPDITFVIDASIELALARTS----------LNGFENHGPEFYDRVREGFRTIVA 169

Query: 183 NQPDRCHIVD 192
           N P RCH++D
Sbjct: 170 NNPHRCHMID 179


>gi|22125658|ref|NP_669081.1| thymidylate kinase [Yersinia pestis KIM 10]
 gi|45442039|ref|NP_993578.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001]
 gi|108807915|ref|YP_651831.1| thymidylate kinase [Yersinia pestis Antiqua]
 gi|108812186|ref|YP_647953.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|145599124|ref|YP_001163200.1| thymidylate kinase [Yersinia pestis Pestoides F]
 gi|149366521|ref|ZP_01888555.1| thymidylate kinase [Yersinia pestis CA88-4125]
 gi|162421207|ref|YP_001607823.1| thymidylate kinase [Yersinia pestis Angola]
 gi|165925614|ref|ZP_02221446.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165940160|ref|ZP_02228692.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008626|ref|ZP_02229524.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166210903|ref|ZP_02236938.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401793|ref|ZP_02307284.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421799|ref|ZP_02313552.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167427086|ref|ZP_02318839.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470268|ref|ZP_02334972.1| thymidylate kinase [Yersinia pestis FV-1]
 gi|218928741|ref|YP_002346616.1| thymidylate kinase [Yersinia pestis CO92]
 gi|229841590|ref|ZP_04461748.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843706|ref|ZP_04463849.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229894450|ref|ZP_04509632.1| thymidylate kinase [Yersinia pestis Pestoides A]
 gi|229902510|ref|ZP_04517629.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|270490312|ref|ZP_06207386.1| dTMP kinase [Yersinia pestis KIM D27]
 gi|294504194|ref|YP_003568256.1| thymidylate kinase [Yersinia pestis Z176003]
 gi|6016463|sp|O69169|KTHY_YERPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123072761|sp|Q1C6N6|KTHY_YERPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123073357|sp|Q1CI27|KTHY_YERPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223130|sp|A4TLR5|KTHY_YERPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687291|sp|A9R3P0|KTHY_YERPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21958570|gb|AAM85332.1|AE013779_6 thymidylate kinase [Yersinia pestis KIM 10]
 gi|3176887|gb|AAC18855.1| thymidylate kinase [Yersinia pestis]
 gi|45436902|gb|AAS62455.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001]
 gi|108775834|gb|ABG18353.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|108779828|gb|ABG13886.1| thymidylate kinase [Yersinia pestis Antiqua]
 gi|115347352|emb|CAL20250.1| thymidylate kinase [Yersinia pestis CO92]
 gi|145210820|gb|ABP40227.1| thymidylate kinase [Yersinia pestis Pestoides F]
 gi|149290895|gb|EDM40970.1| thymidylate kinase [Yersinia pestis CA88-4125]
 gi|162354022|gb|ABX87970.1| thymidylate kinase [Yersinia pestis Angola]
 gi|165911906|gb|EDR30551.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922723|gb|EDR39874.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165993008|gb|EDR45309.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166208083|gb|EDR52563.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960284|gb|EDR56305.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048898|gb|EDR60306.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167053930|gb|EDR63762.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680556|gb|EEO76653.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|229689314|gb|EEO81377.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694053|gb|EEO84101.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229703469|gb|EEO90486.1| thymidylate kinase [Yersinia pestis Pestoides A]
 gi|262362311|gb|ACY59032.1| thymidylate kinase [Yersinia pestis D106004]
 gi|270338816|gb|EFA49593.1| dTMP kinase [Yersinia pestis KIM D27]
 gi|294354653|gb|ADE64994.1| thymidylate kinase [Yersinia pestis Z176003]
 gi|320014746|gb|ADV98317.1| thymidylate kinase [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 212

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTTRDTVVAVLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58

Query: 60  DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           D      +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL++  + E  PD T+ LDLP  +GL R + R        LD  E++ +   E+ R  +
Sbjct: 119 ASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L++A +       +D++   + V+ +I
Sbjct: 173 LELAASDAS-IKTIDASQPIEQVSASI 198


>gi|317120927|ref|YP_004100930.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885]
 gi|315590907|gb|ADU50203.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885]
          Length = 238

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 9/205 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FIS EG EG+GK+T  +++  +L+ +     + REPGGTP  E  R +LL+ G     
Sbjct: 27  GWFISLEGGEGSGKSTQAAVVMDWLRSRGMPCRLVREPGGTPLGERLRELLLN-GTGRPV 85

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++FAAAR   VE VI P+L+ G+ ++CDR++DSS AYQG         + S    
Sbjct: 86  PVAEMLLFAAARAQLVETVILPSLLAGETVVCDRYVDSSLAYQGSGLGLGWEAVWSANRW 145

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + +MPD T++ D P +  L R ++R         D  ER+    H + R+ +  +AR 
Sbjct: 146 ATRGIMPDLTLLFDCPPE--LARARHRRP------GDDIERRGQGFHRRVREGYRALARA 197

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             +R  ++D++     VA  +  ++
Sbjct: 198 HGNRVVVIDASRPALEVAAEVRRVL 222


>gi|170023932|ref|YP_001720437.1| thymidylate kinase [Yersinia pseudotuberculosis YPIII]
 gi|238688405|sp|B1JI38|KTHY_YERPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169750466|gb|ACA67984.1| dTMP kinase [Yersinia pseudotuberculosis YPIII]
          Length = 212

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58

Query: 60  DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           D      +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL++  + E  PD T+ LDLP  +GL R + R        LD  E++ +   E+ R  +
Sbjct: 119 ASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L++A +       +D++   + V+ +I
Sbjct: 173 LELAASDAS-IKTIDASQPIEQVSASI 198


>gi|300814241|ref|ZP_07094517.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511665|gb|EFK38889.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 202

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG +G GK+T  +L+   L ++N +V  TREPGGT  +EA R ++L+    E   
Sbjct: 3   LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYREMDY 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I+PAL  GK++LC+RF+ SS AYQG   +     + ++ E +
Sbjct: 63  RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   I     +   ++++N          D  ER     H K R  + ++ +  
Sbjct: 123 TMGLEPDIVFIFLNKEETLARKLEN---------ADRLERAGDDFHNKVRDFYKNLQK-- 171

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            D  + +D+  S   V ++ L ++
Sbjct: 172 KDNYYFIDAWQSIDKVFSDTLEVL 195


>gi|169832724|ref|YP_001694387.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688287|sp|B1IBA2|KTHY_STRPI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|168995226|gb|ACA35838.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6]
          Length = 212

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEVKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD  E  D  +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|293391495|ref|ZP_06635829.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952029|gb|EFE02148.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 210

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 8/206 (3%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T H  ++         +V  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRHLIKHENEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L SL++
Sbjct: 63  TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+   +GL R + R        LD  E+++     + R  +L++ +
Sbjct: 123 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  I+D+A   + V  +I + V
Sbjct: 177 DNP-KAVIIDAAQPVEQVRADIQSAV 201


>gi|332162101|ref|YP_004298678.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318606150|emb|CBY27648.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666331|gb|ADZ42975.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 212

 Score =  111 bits (277), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58

Query: 60  DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           D      +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL++  + E  PD T+ LDLP  IGL R + R        LD  E++ +   E+ R+ +
Sbjct: 119 TSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           L +A         +D++   + V+ +I  ++ + +  R
Sbjct: 173 LKLAATDSS-IKTIDASQPLEQVSESISRVLKQWLTSR 209


>gi|220903414|ref|YP_002478726.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|254808288|sp|B8J2G0|KTHY_DESDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219867713|gb|ACL48048.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 217

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 119/215 (55%), Gaps = 7/215 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEGIEGAGK+T I  L  +LQ + +D  +TREPGG+      R +LL        +
Sbjct: 1   MFVTFEGIEGAGKSTAIDYLSDYLQARGHDPVLTREPGGSALGRRLRALLLDVRTGGLAS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R  HV  VIRPAL  G+++LCDRF DS+ AYQG        +L SL   +
Sbjct: 61  RAELFLFLADRAQHVTEVIRPALEAGQVVLCDRFTDSTLAYQGYGRGLDTEYLRSLNTAA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFERKDVMIHEKRRQIFLDI 180
              + PD T++LDLPV  GL+R   R     SA +      F+ + +  HE+ R+ +  +
Sbjct: 121 TGGLEPDLTLLLDLPVRCGLERAGER---NRSAGMVIAEGRFDSESLDFHERVRRGYRAL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A  +P+R  I+D++   + V     + +   +++R
Sbjct: 178 AEEEPERFAIIDASQPPEDVVLQCRSAIEAYLRRR 212


>gi|22299598|ref|NP_682845.1| thymidylate kinase [Thermosynechococcus elongatus BP-1]
 gi|46576557|sp|Q8DHA4|KTHY_THEEB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|22295782|dbj|BAC09607.1| thymidylate kinase [Thermosynechococcus elongatus BP-1]
          Length = 241

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 103/204 (50%), Gaps = 22/204 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHV------TREPGGTPAAEAAR 51
           +GLFI  EG EGAGKTT +  +  +L+   +       HV      TREPGGTP  +  R
Sbjct: 9   AGLFIVLEGGEGAGKTTQMGAIATWLENSGWLAKLRSCHVDPPLLLTREPGGTPLGQGLR 68

Query: 52  HVLL--SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
            +LL     +D     AE +++AA R  HV   IRP L  G I+LCDR+  S+ AYQG  
Sbjct: 69  QLLLHSDLAIDPL---AELLLYAADRAQHVAMGIRPQLQRGGIVLCDRYTASTVAYQGYG 125

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +  + +++   +  D  + LDLPV +GL R Q R         D  E+  V  
Sbjct: 126 RGLDLQIIQHINQMATGGLGADLVLWLDLPVAVGLARTQQR------GRGDRLEQNAVAF 179

Query: 170 HEKRRQIFLDIARNQPDRCHIVDS 193
           HE+ RQ FL +A+   DR   +D+
Sbjct: 180 HERVRQGFLALAQQGSDRWQRIDA 203


>gi|294636822|ref|ZP_06715157.1| dTMP kinase [Edwardsiella tarda ATCC 23685]
 gi|291089965|gb|EFE22526.1| dTMP kinase [Edwardsiella tarda ATCC 23685]
          Length = 213

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 107/201 (53%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63
           FI  EG+EGAGKTT   ++   L+R    +V  TREPGGTP AE  R ++   C  +   
Sbjct: 5   FIVIEGLEGAGKTTARDVVVEELRRHGVQEVVFTREPGGTPLAEQLRQLVKEGCAGETLT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         L +L++ 
Sbjct: 65  DRAEVLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGIDPQLLQTLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T+ LD+P + GL R ++R        LD  ER+ +   E+ R  +L +A +
Sbjct: 125 VLGSFKPDLTLYLDIPPEQGLARARSR------GELDRIERESLAFFERTRARYLALA-S 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
           Q +R   +D++     V+  I
Sbjct: 178 QDERIVTLDASQPLAQVSDAI 198


>gi|262276042|ref|ZP_06053851.1| thymidylate kinase [Grimontia hollisae CIP 101886]
 gi|262219850|gb|EEY71166.1| thymidylate kinase [Grimontia hollisae CIP 101886]
          Length = 211

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 13/208 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EG+EGAGKTT I  +   L+ +    +  TREPGGTP AE  R ++     
Sbjct: 1   MKNGKFIVVEGLEGAGKTTAIRNVIDILKAQGIAHIETTREPGGTPLAEQMRTLVKEGHP 60

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE     AE ++  AAR+  V+NVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 61  DEPLTDMAELLLLYAARIQLVDNVIKPALAKGAYVVGDRHDMSSQAYQGGGRGFDKALMQ 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176
           +L++  + +  PD T+ LDL   IGL+R + R  L   E   LD+F R         R  
Sbjct: 121 NLRDTVLGDFRPDFTLYLDLDPAIGLERARARGELDRIEQMELDFFHRT--------RAR 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204
           +L++A N+ +   I+D++ S ++V+ +I
Sbjct: 173 YLELA-NEDENVVIIDASQSIENVSADI 199


>gi|251789239|ref|YP_003003960.1| thymidylate kinase [Dickeya zeae Ech1591]
 gi|247537860|gb|ACT06481.1| thymidylate kinase [Dickeya zeae Ech1591]
          Length = 215

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 6/169 (3%)

Query: 1   MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGKT+ H  +++       +DV  TREPGGTP AE  R  L+  GV
Sbjct: 1   MNNSKFIVIEGLEGAGKTSAHAVVVETLRSFGIHDVVFTREPGGTPLAEKLR-TLIKQGV 59

Query: 60  --DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +    +AE ++  AAR+  VENVIRPAL  G  ++ DR   SS AYQG         +
Sbjct: 60  AGETLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDPHLM 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
            SL++  + +  PD T+ LD+P ++GLKR + R  L   E   L +FER
Sbjct: 120 TSLRDTVLGDFRPDLTLYLDIPPELGLKRARQRGELDRIEQESLAFFER 168


>gi|124515019|gb|EAY56530.1| Thymidylate kinase [Leptospirillum rubarum]
          Length = 220

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 6/205 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G+ I+FEGI+G+GK+T    +   L      V ++REPG TP  E  R +LLS  V  
Sbjct: 5   DTGILITFEGIDGSGKSTQAREIHNALSLAGLKVRLSREPGATPLGEEIRKILLSDSV-P 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AE ++F A R  HV++V+RP+   G+ILL DRF D++ AYQG         +++L 
Sbjct: 64  VGNLAELLLFLADRAQHVQDVLRPSRSSGEILLVDRFTDATTAYQGYGMGHPLPLIETLH 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +Q++ P  T +LD+      +R++ R   +     +  E + +    K R  +L++A
Sbjct: 124 KTILQDIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFRKVRNGYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
           +  P R  ++D+    + +  +IL 
Sbjct: 179 KQNPHRFCVLDATLPREELTRSILK 203


>gi|293365189|ref|ZP_06611906.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
 gi|307703727|ref|ZP_07640668.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
 gi|291316639|gb|EFE57075.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
 gi|307622562|gb|EFO01558.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
          Length = 212

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVSIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFD 206


>gi|297582371|ref|YP_003698151.1| thymidylate kinase [Bacillus selenitireducens MLS10]
 gi|297140828|gb|ADH97585.1| thymidylate kinase [Bacillus selenitireducens MLS10]
          Length = 210

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 113/204 (55%), Gaps = 10/204 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG EGAGKT+ +  L + L  + +DV +TREPGG+  AE  R V+L     E    
Sbjct: 7   FITVEGGEGAGKTSVLKDLHQALILEGHDVLMTREPGGSVIAEKIRDVILDPAHKEMDDR 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123
            EA+++AAAR  H+   + P L +G ++LCDR++DSS  YQG    ++ + ++ ++E+  
Sbjct: 67  TEALLYAAARRQHLTEKVLPHLEKGGVVLCDRYVDSSLVYQG---GARGIGIEEVRELNH 123

Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +   P  T   D+  ++GL R+      RE   LD    + +  HE+ R  +L +A+
Sbjct: 124 FATEAFYPGKTFYFDVSPEVGLGRIAANKG-REFNRLD---GESLAFHEQVRATYLTLAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
            +P R  ++D+  +   V  ++L 
Sbjct: 180 EEPARITVIDAERTQDEVLRDVLQ 203


>gi|310830718|ref|YP_003965819.1| Thymidylate kinase [Paenibacillus polymyxa SC2]
 gi|309250185|gb|ADO59751.1| Thymidylate kinase [Paenibacillus polymyxa SC2]
          Length = 210

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +S EG EGAGK+  I  +K           +TREPGG   AE  R ++L           
Sbjct: 1   MSLEGGEGAGKSLVIQAIKDHFAESGKPYLITREPGGIEIAEKIRTIILEPSHTSMDGRT 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           EA+++AAAR  H+   + PA+ +G  ++CDRF+DSS  YQG         +  L + +++
Sbjct: 61  EALLYAAARRQHLVEKVFPAINQGTTVICDRFIDSSLVYQGYARGLGFETILELNQFAIE 120

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
             MPD TI LD+   +GL+R+ +R + RE   LD    + V  HEK    +  +    P+
Sbjct: 121 GCMPDVTIWLDVDPKVGLERI-SRNNEREVNRLDL---ESVRFHEKVHMGYQILHAMYPE 176

Query: 187 RCHIVDSAHSFQSVATNILNIV 208
           R H +D+  + + V  +++ ++
Sbjct: 177 RIHKIDANQTPEDVVKDVIKVI 198


>gi|300704091|ref|YP_003745693.1| thymidylate kinase [Ralstonia solanacearum CFBP2957]
 gi|299071754|emb|CBJ43078.1| thymidylate kinase [Ralstonia solanacearum CFBP2957]
          Length = 205

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 13/195 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L+    Q + P  T++ DL  +I   R      L ++   D FE +      + R  +L
Sbjct: 119 ALEHWVQQGLQPTKTLLFDLAPEIAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDS 193
             A   P+R  I+D+
Sbjct: 173 RRAAADPERFVIIDA 187


>gi|317492364|ref|ZP_07950793.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919703|gb|EFV41033.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 213

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 110/202 (54%), Gaps = 11/202 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT    +   L+++   D+  TREPGGTP AE  R  L+  GV+  + 
Sbjct: 5   FIVIEGLEGAGKTTARDTVVDVLRQQGIQDIVFTREPGGTPLAEKLRD-LVKQGVENEKL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  V+NVI+PAL  G  ++ DR   SS AYQG         + SL++
Sbjct: 64  TDKAEVLMLYAARVQLVDNVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDSRLMQSLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LDLP  IGL+R ++R        LD  E++ +   E+ R  +L++A 
Sbjct: 124 TVLGDFKPDLTLYLDLPPAIGLERARSR------GALDRIEKESLAFFERTRTRYLELA- 176

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
            Q      VD++ +   V   I
Sbjct: 177 AQDASIITVDASQTLPEVTAAI 198


>gi|37520247|ref|NP_923624.1| thymidylate kinase [Gloeobacter violaceus PCC 7421]
 gi|46576425|sp|Q7NMT7|KTHY_GLOVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|35211240|dbj|BAC88619.1| thymidylate kinase [Gloeobacter violaceus PCC 7421]
          Length = 212

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 5/204 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG GKTT ++LL  +L+++ + V  TREPGGT A   +   LL     E   
Sbjct: 1   MFITFEGGEGCGKTTQLTLLGDWLEKRCHRVVRTREPGGT-ALGRSLRGLLLDARSEITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++A  R +H+  V+RPAL  G  +LCDRF DS+ AYQG         ++ L  I+
Sbjct: 60  TAELLLYATDRAEHLARVVRPALASGAAVLCDRFSDSTVAYQGYGRGLDLGLIERLNAIA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  L L    GL R   R +       D  E + +  H++    F  +A   
Sbjct: 120 TGGLLPDLTFWLKLDPQAGLVR---RLA-SNGNTPDRIEAETLAFHQRVHMGFAALANRY 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           P R   VD+  S ++ A  I + V
Sbjct: 176 PGRIRPVDAGLSVEATAEQIRSAV 199


>gi|300716239|ref|YP_003741042.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661]
 gi|299062075|emb|CAX59191.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661]
          Length = 210

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 11/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT   ++   L+ +   D+  TREPGGTP AE  R  L+  G+D    
Sbjct: 5   FIVIEGLEGAGKTTARDVVVATLREQGISDIVFTREPGGTPLAEKLRD-LIKQGIDGERV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +  L+ 
Sbjct: 64  TDQAELLMLYAARVQLVENVIKPALASGAWVVGDRHDLSSQAYQGGGRGMDIALMSQLKH 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + E  PD TI LD+  +IGL+R + R        LD  E++ +    + RQ +L++A 
Sbjct: 124 SVLGEFAPDMTIYLDVTPEIGLQRARAR------GELDRIEQESLNFFIRTRQRYLELAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +   R   VD+  S + V+ +I  ++
Sbjct: 178 SD-SRIQTVDATQSIEQVSASIRQVL 202


>gi|319793761|ref|YP_004155401.1| thymidylate kinase [Variovorax paradoxus EPS]
 gi|315596224|gb|ADU37290.1| thymidylate kinase [Variovorax paradoxus EPS]
          Length = 218

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 14/209 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLF++ EGI+GAGK++H+  ++   + +   V  TREPGGTP AE  R ++L   +D
Sbjct: 1   MSEGLFLTLEGIDGAGKSSHLDAMEALFKAQGRTVVRTREPGGTPLAETLRGLILEQPMD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E+++  AAR DH+  VI PAL  G ++LCDRF D+++AYQG         L +L
Sbjct: 61  PL---TESLLVFAARRDHIVQVIEPALARGDLVLCDRFTDATFAYQGAGRGFDAAVLSTL 117

Query: 121 QEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++ +        + P  T+  DL  +I  +R+        +   D FE + V    +  Q
Sbjct: 118 EQWAQGGRAEGLLQPHITLWFDLAPEIAAQRLAG------ARVPDKFEAQPVEFFRRVAQ 171

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            + D A     R   +D++ +   V   I
Sbjct: 172 GYADRADADAQRFIRIDASQARDQVWQQI 200


>gi|227111684|ref|ZP_03825340.1| thymidylate kinase [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 219

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT  +++   L+     DV  TREPGGTP AE  R ++     
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGIA 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  V+NVI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R       R+   LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRA------RQRGELDRIEQESLAFFDRTRSRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A  + D    +D++    +V+ +I
Sbjct: 174 ELA-AEDDSILTIDASQPIDAVSADI 198


>gi|229587042|ref|YP_002845543.1| thymidylate kinase [Rickettsia africae ESF-5]
 gi|259494279|sp|C3PLG0|KTHY_RICAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|228022092|gb|ACP53800.1| Thymidylate kinase [Rickettsia africae ESF-5]
          Length = 203

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPISELLQVMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P+R   + ++
Sbjct: 175 SNRFPERIKTIKAS 188


>gi|241663065|ref|YP_002981425.1| thymidylate kinase [Ralstonia pickettii 12D]
 gi|240865092|gb|ACS62753.1| thymidylate kinase [Ralstonia pickettii 12D]
          Length = 205

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 19/213 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + LQ K       V VTREPGGT   E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTSLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A R +H+  VI+PAL  G  ++ DRF D+++AYQG     + L +D
Sbjct: 60  -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQG---GGRGLAID 115

Query: 119 SLQ--EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            L+  E  VQ+ + P  TI+ DL  +I   R      L ++   D FE +      + R 
Sbjct: 116 RLEVLERWVQQGLQPTKTILFDLAPEIAAAR------LADARTPDKFEAESAQFFLRTRA 169

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A  +PDR  ++++      +  ++ N++
Sbjct: 170 EYLRRAAAEPDRFVVLNANRERADIQKDLENVL 202


>gi|325849205|ref|ZP_08170656.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480205|gb|EGC83272.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 209

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 117/216 (54%), Gaps = 12/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GL I FEG +G+GKTT +  +   L +  YD++  REPGGT  +E  R ++L     + 
Sbjct: 2   NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA+R   +E  +RP L +G I+LCDRF+ SS  YQG     + L +D +++
Sbjct: 62  SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQG---IGRGLGIDEVKK 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   ++ E+  D T+ L++     + R       R++   D  E +D   H+K  + ++D
Sbjct: 119 INDFAIGEIKADLTLFLNIDYKTAIDRK------RKNFVSDRLENEDDSFHKKTYEGYID 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +++   D    +D+  S   V  N ++ +   ++++
Sbjct: 173 LSKRFKDEIISIDANKSLDIVVDNCIDTIKTYIKEK 208


>gi|167586965|ref|ZP_02379353.1| dTMP kinase [Burkholderia ubonensis Bu]
          Length = 201

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 15/205 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGRFITFEGIDGAGKTTHLEWFCERLQDKLAGAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +  +R       R +A + D FE +      + R 
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFARTRG 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSV 200
            +L  A   P R  IVD+  S   +
Sbjct: 171 EYLRRAAEAPHRFAIVDATQSIPEI 195


>gi|127512508|ref|YP_001093705.1| dTMP kinase [Shewanella loihica PV-4]
 gi|166223116|sp|A3QD98|KTHY_SHELP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|126637803|gb|ABO23446.1| thymidylate kinase [Shewanella loihica PV-4]
          Length = 210

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 10/209 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59
           NS  FI  EG+EGAGK++ I+L++ F+++ N    V TREPGGTP AE  R ++ ++   
Sbjct: 4   NSAKFIVIEGLEGAGKSSAIALVRDFIEKHNGVPPVCTREPGGTPLAERIRDLVKIADPN 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    E+E ++  AAR   V NVI+PAL +G  +L DR   SS AYQG       L +++
Sbjct: 64  DPLCDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRQLMPL-VEA 122

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++++  PD T+ LD+   +GL+R ++R        LD  E++ +   E+ R  +L 
Sbjct: 123 VSQATLKDFKPDLTLYLDIDPQLGLQRARDR------GALDRIEQQALSFFERARATYLQ 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A    +   ++D++ +   V   IL ++
Sbjct: 177 LAARD-ESIVVIDASQTMAQVHKEILAVL 204


>gi|187931061|ref|YP_001891045.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|238691529|sp|B2SF22|KTHY_FRATM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187711970|gb|ACD30267.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 209

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 8/204 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D E  +
Sbjct: 5   FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +L +  
Sbjct: 65  DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    PD  I LD+   +GL+R Q      +    D  E+  +    K R++F D+ ++ 
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQ------KVGSPDRIEKAGLEFFNKTRKVFKDLVKDS 178

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            +   I D+A S Q V   I  I+
Sbjct: 179 DNAIEI-DAAKSIQEVEKQIYLIL 201


>gi|152979524|ref|YP_001345153.1| thymidylate kinase [Actinobacillus succinogenes 130Z]
 gi|254808270|sp|A6VQH1|KTHY_ACTSZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150841247|gb|ABR75218.1| dTMP kinase [Actinobacillus succinogenes 130Z]
          Length = 210

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 12/214 (5%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGKTT + +++++       D+  TREPGGTP AE  R ++     + 
Sbjct: 2   KGKFIVLEGLEGAGKTTALHTVVEQLRSLGITDLVFTREPGGTPLAEKLRQLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PAL  GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALAAGKWVIGDRHDLSSQAYQGGGRGLDRHFMQTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  +    PD T+ LD+    GL R + R  L   E A LD+F R         R  +L+
Sbjct: 122 DSVLGGFEPDFTLYLDIEPAEGLARARGRGELDRIEQAGLDFFNRT--------RTRYLE 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + R+ P +  ++++  + + V  +I + V + V+
Sbjct: 174 LVRDNP-KAVVINARQNIERVTADIQSAVKKFVE 206


>gi|315094240|gb|EFT66216.1| thymidylate kinase [Propionibacterium acnes HL060PA1]
          Length = 214

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 9/202 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT + LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 12  GGVFVVFEGGDGAGKTTQVRLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG         +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P R  ++++  S + ++  I
Sbjct: 183 AHPQRYLVLNARKSRKEISEAI 204


>gi|194289604|ref|YP_002005511.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424]
 gi|254808286|sp|B3R181|KTHY_CUPTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|193223439|emb|CAQ69444.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424]
          Length = 203

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FI+FEGI+GAGK+THI  +   L+ +     V  TREPGGT   E  R +LL     +
Sbjct: 3   GKFITFEGIDGAGKSTHIDWVADRLRARADIAGVVTTREPGGTSLGEDLRQILLHR---K 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  AAR +H+  VI PAL  GK ++ DRF D+++AYQG         L+ L+
Sbjct: 60  MHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVLE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD T++ D+P++    R      L  +   D FE +     ++ R  +L  A
Sbjct: 120 NWVQGSLQPDLTLLFDVPLETASAR------LAAARTPDKFEAESRAFFQRTRDEYLRRA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P R  ++D+  S   +   +  I+
Sbjct: 174 AQSPHRFRVIDATRSIADIRDELEKIL 200


>gi|34581335|ref|ZP_00142815.1| thymidylate kinase [Rickettsia sibirica 246]
 gi|28262720|gb|EAA26224.1| thymidylate kinase [Rickettsia sibirica 246]
          Length = 203

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMVRKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDIEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P+R   + ++
Sbjct: 175 SNRFPERIKTIKAS 188


>gi|56707291|ref|YP_169187.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110669761|ref|YP_666318.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301328|ref|YP_001121296.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|224456356|ref|ZP_03664829.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254369973|ref|ZP_04985981.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874129|ref|ZP_05246839.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|73920819|sp|Q5NIF5|KTHY_FRATT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122971099|sp|Q14JV8|KTHY_FRAT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221744|sp|A4IW74|KTHY_FRATW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56603783|emb|CAG44750.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320094|emb|CAL08133.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049105|gb|ABO46176.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151568219|gb|EDN33873.1| hypothetical protein FTBG_01572 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840128|gb|EET18564.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158410|gb|ADA77801.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 209

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D E  +
Sbjct: 5   FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +L +  
Sbjct: 65  DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    PD  I LD+   +GL+R Q   S    E A L++F R         R++F D+ +
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +  +   I D+A S Q V   I  I+
Sbjct: 177 DSDNAIEI-DAAKSIQEVEKQIYLIL 201


>gi|157964834|ref|YP_001499658.1| thymidylate kinase [Rickettsia massiliae MTU5]
 gi|166987707|sp|A8F2H5|KTHY_RICM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157844610|gb|ABV85111.1| Thymidylate kinase [Rickettsia massiliae MTU5]
          Length = 203

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAIAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMSNKFDIRGIDFYKKIYDCFKEL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P+R   + ++
Sbjct: 175 SNRFPERIKTIKAS 188


>gi|153000971|ref|YP_001366652.1| thymidylate kinase [Shewanella baltica OS185]
 gi|160875684|ref|YP_001555000.1| thymidylate kinase [Shewanella baltica OS195]
 gi|217973069|ref|YP_002357820.1| thymidylate kinase [Shewanella baltica OS223]
 gi|304409049|ref|ZP_07390670.1| thymidylate kinase [Shewanella baltica OS183]
 gi|307303052|ref|ZP_07582807.1| thymidylate kinase [Shewanella baltica BA175]
 gi|151365589|gb|ABS08589.1| dTMP kinase [Shewanella baltica OS185]
 gi|160861206|gb|ABX49740.1| dTMP kinase [Shewanella baltica OS195]
 gi|217498204|gb|ACK46397.1| dTMP kinase [Shewanella baltica OS223]
 gi|304352870|gb|EFM17267.1| thymidylate kinase [Shewanella baltica OS183]
 gi|306913412|gb|EFN43834.1| thymidylate kinase [Shewanella baltica BA175]
 gi|315267873|gb|ADT94726.1| thymidylate kinase [Shewanella baltica OS678]
          Length = 208

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 14/207 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63
           FI  EG+EGAGK++ I+L++ F+++      + TREPGGTP AE  R ++ ++   D   
Sbjct: 7   FIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPLC 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++  AAR   V NVI+PAL +G+ +L DR   SS AYQG       L ++++   
Sbjct: 67  DEAECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMPL-VEAVSTA 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++   PD T+ LDL   +GL R   R  L   E   +D+FER         R  +L +A
Sbjct: 126 TLKGFKPDLTLYLDLDPKLGLTRAAKRGELDRIEQQAIDFFERA--------RATYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            ++ D   ++D++ +   V  +IL ++
Sbjct: 178 -SEDDSIVVIDASQTMAEVHKDILAVL 203


>gi|149191871|ref|ZP_01870106.1| thymidylate kinase [Vibrio shilonii AK1]
 gi|148834306|gb|EDL51308.1| thymidylate kinase [Vibrio shilonii AK1]
          Length = 212

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 11/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FI  EG+EGAGK+T IS L+  L      D+  TREPGGT  AE  R ++     
Sbjct: 1   MSQAKFIVIEGLEGAGKSTAISTLRAELDAAGIQDIVNTREPGGTVLAEKMRALVKEEHE 60

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E     AE ++  A+R+  VE VI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 61  GEPLQDRAELLLMYASRIQLVETVIKPALAKGAWVIGDRHDMSSQAYQGGGREIDQAVMT 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+ I++ E  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 121 SLKHIAIGEFKPDFTLYLDIDPRLGLERARGR------GELDRIEKMDISFFERTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQK 214
           ++A N  +   I+D++   + V  +I   V  W   QK
Sbjct: 175 EMA-NNDESVAIIDASQKIEDVQHSIQQAVRTWLAKQK 211


>gi|153802880|ref|ZP_01957466.1| thymidylate kinase [Vibrio cholerae MZO-3]
 gi|124121598|gb|EAY40341.1| thymidylate kinase [Vibrio cholerae MZO-3]
          Length = 212

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++   LQ+   D +  TREPGGT  AE  R ++      +E  
Sbjct: 5   FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + SL++ 
Sbjct: 65  DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L++A N
Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   ++D+A S + V  +I
Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198


>gi|167562453|ref|ZP_02355369.1| thymidylate kinase [Burkholderia oklahomensis EO147]
 gi|167569636|ref|ZP_02362510.1| thymidylate kinase [Burkholderia oklahomensis C6786]
          Length = 206

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      L+  L +    V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGKSGKHVVVTREPGGTRLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A+  P R  IVDS+     +   +  ++
Sbjct: 172 YLRRAQEAPHRFAIVDSSEPIPQIRKKLEGVL 203


>gi|77413425|ref|ZP_00789617.1| thymidylate kinase [Streptococcus agalactiae 515]
 gi|77160519|gb|EAO71638.1| thymidylate kinase [Streptococcus agalactiae 515]
          Length = 185

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 4/181 (2%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
           D+  TREPGG   +E  RH++L     +   + E +++ AAR  H+   + PAL EGKI+
Sbjct: 9   DILTTREPGGVTISEEIRHIILDVKHTQMDKKTELLLYMAARRQHLVEKVLPALEEGKIV 68

Query: 94  LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           L DRF+DSS AYQG         +  L + +     PD T+  D+P ++GL+R+Q     
Sbjct: 69  LMDRFIDSSVAYQGSGRGLDKSHIKWLNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ- 127

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           RE   LD  E+ D  +H++ RQ +L++A ++P+R   +D++     V     +I+ + + 
Sbjct: 128 REVNRLD-LEQLD--MHQRVRQGYLELADSEPNRIVTIDASQQLDEVIAETFSIILDRIN 184

Query: 214 K 214
           +
Sbjct: 185 Q 185


>gi|307709124|ref|ZP_07645583.1| thymidylate kinase [Streptococcus mitis SK564]
 gi|307620070|gb|EFN99187.1| thymidylate kinase [Streptococcus mitis SK564]
          Length = 212

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSIGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|261866745|ref|YP_003254667.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412077|gb|ACX81448.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 209

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 9/206 (4%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T H  ++         +V  TREPGGTP AE  RH L+    +E 
Sbjct: 3   GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRH-LIKHENEEP 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L SL++
Sbjct: 62  TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+   +GL R + R        LD  E+++     + R  +L++ +
Sbjct: 122 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  I+D+A   + V  +I + V
Sbjct: 176 DNP-KAVIIDAAQPVEQVRADIQSAV 200


>gi|15642018|ref|NP_231650.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121590849|ref|ZP_01678174.1| thymidylate kinase [Vibrio cholerae 2740-80]
 gi|121728860|ref|ZP_01681870.1| thymidylate kinase [Vibrio cholerae V52]
 gi|147673617|ref|YP_001217543.1| thymidylate kinase [Vibrio cholerae O395]
 gi|153216421|ref|ZP_01950456.1| thymidylate kinase [Vibrio cholerae 1587]
 gi|153819691|ref|ZP_01972358.1| thymidylate kinase [Vibrio cholerae NCTC 8457]
 gi|153822936|ref|ZP_01975603.1| thymidylate kinase [Vibrio cholerae B33]
 gi|153827018|ref|ZP_01979685.1| thymidylate kinase [Vibrio cholerae MZO-2]
 gi|153830262|ref|ZP_01982929.1| thymidylate kinase [Vibrio cholerae 623-39]
 gi|227082143|ref|YP_002810694.1| thymidylate kinase [Vibrio cholerae M66-2]
 gi|229507895|ref|ZP_04397400.1| thymidylate kinase [Vibrio cholerae BX 330286]
 gi|229511870|ref|ZP_04401349.1| thymidylate kinase [Vibrio cholerae B33]
 gi|229519006|ref|ZP_04408449.1| thymidylate kinase [Vibrio cholerae RC9]
 gi|229521928|ref|ZP_04411345.1| thymidylate kinase [Vibrio cholerae TM 11079-80]
 gi|229524026|ref|ZP_04413431.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426]
 gi|229607440|ref|YP_002878088.1| thymidylate kinase [Vibrio cholerae MJ-1236]
 gi|254849103|ref|ZP_05238453.1| thymidylate kinase [Vibrio cholerae MO10]
 gi|255745235|ref|ZP_05419184.1| thymidylate kinase [Vibrio cholera CIRS 101]
 gi|262148995|ref|ZP_06028141.1| thymidylate kinase [Vibrio cholerae INDRE 91/1]
 gi|262167963|ref|ZP_06035663.1| thymidylate kinase [Vibrio cholerae RC27]
 gi|298497954|ref|ZP_07007761.1| thymidylate kinase [Vibrio cholerae MAK 757]
 gi|14285518|sp|Q9KQI2|KTHY_VIBCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|172047643|sp|A5F6P9|KTHY_VIBC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808314|sp|C3LNW7|KTHY_VIBCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|9656560|gb|AAF95164.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121547300|gb|EAX57420.1| thymidylate kinase [Vibrio cholerae 2740-80]
 gi|121628868|gb|EAX61326.1| thymidylate kinase [Vibrio cholerae V52]
 gi|124114280|gb|EAY33100.1| thymidylate kinase [Vibrio cholerae 1587]
 gi|126509757|gb|EAZ72351.1| thymidylate kinase [Vibrio cholerae NCTC 8457]
 gi|126519547|gb|EAZ76770.1| thymidylate kinase [Vibrio cholerae B33]
 gi|146315500|gb|ABQ20039.1| thymidylate kinase [Vibrio cholerae O395]
 gi|148874275|gb|EDL72410.1| thymidylate kinase [Vibrio cholerae 623-39]
 gi|149739137|gb|EDM53426.1| thymidylate kinase [Vibrio cholerae MZO-2]
 gi|227010031|gb|ACP06243.1| thymidylate kinase [Vibrio cholerae M66-2]
 gi|227013913|gb|ACP10123.1| thymidylate kinase [Vibrio cholerae O395]
 gi|229337607|gb|EEO02624.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426]
 gi|229340853|gb|EEO05858.1| thymidylate kinase [Vibrio cholerae TM 11079-80]
 gi|229343695|gb|EEO08670.1| thymidylate kinase [Vibrio cholerae RC9]
 gi|229351835|gb|EEO16776.1| thymidylate kinase [Vibrio cholerae B33]
 gi|229355400|gb|EEO20321.1| thymidylate kinase [Vibrio cholerae BX 330286]
 gi|229370095|gb|ACQ60518.1| thymidylate kinase [Vibrio cholerae MJ-1236]
 gi|254844808|gb|EET23222.1| thymidylate kinase [Vibrio cholerae MO10]
 gi|255737065|gb|EET92461.1| thymidylate kinase [Vibrio cholera CIRS 101]
 gi|262023690|gb|EEY42391.1| thymidylate kinase [Vibrio cholerae RC27]
 gi|262031227|gb|EEY49845.1| thymidylate kinase [Vibrio cholerae INDRE 91/1]
 gi|297542287|gb|EFH78337.1| thymidylate kinase [Vibrio cholerae MAK 757]
 gi|327484551|gb|AEA78958.1| Thymidylate kinase [Vibrio cholerae LMA3894-4]
          Length = 212

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++   LQ+   D +  TREPGGT  AE  R ++      +E  
Sbjct: 5   FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + SL++ 
Sbjct: 65  DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L++A N
Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   ++D+A S + V  +I
Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198


>gi|145219852|ref|YP_001130561.1| thymidylate kinase [Prosthecochloris vibrioformis DSM 265]
 gi|189030836|sp|A4SF00|KTHY_PROVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145206016|gb|ABP37059.1| thymidylate kinase [Chlorobium phaeovibrioides DSM 265]
          Length = 215

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 4/209 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L   L+ +  +V   REPGGT  AE  R +LL    D    
Sbjct: 1   MLITFEGIDGAGKSTQIRKLAAHLRSQGQEVLTLREPGGTEVAENIRLILLESRHD-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V  VIRPAL EG  ++ DRF DS+ AYQG         L+S+  +S
Sbjct: 60  VGELLLFSASRAELVNEVIRPALKEGTTVILDRFFDSTTAYQGYGRGIDLPTLNSIIALS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  S+    ++  LD  ER  +  + K  + +  I 
Sbjct: 120 TGGLKPDITFYLDILPEEALIRKFSEKSIPLAFDNDELDRMERSGLDFYRKVYEGYRCIM 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + +PDR   +++  S Q + T +   + E
Sbjct: 180 QEEPDRFVSINARKSIQEIHTTVTKTLKE 208


>gi|189499981|ref|YP_001959451.1| dTMP kinase [Chlorobium phaeobacteroides BS1]
 gi|189495422|gb|ACE03970.1| dTMP kinase [Chlorobium phaeobacteroides BS1]
          Length = 217

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 4/207 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T +  LK++L  K  +V   REPGGT  AE  R +LL    D    
Sbjct: 1   MLITFEGIDGAGKSTQVKKLKKYLVEKGREVLTLREPGGTVVAEKIRELLLESKHD-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V+ VI P L + K+++ DRF DS+ AYQG         L  + +IS
Sbjct: 60  MGELLLFSASRAELVQQVILPELEKSKVIILDRFFDSTTAYQGYGRGLDLNMLQKINDIS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  SL    E+  +D  E   +  +++ R+ +L +A
Sbjct: 120 TFGLQPDLTFFLDISPEDALIRKFSEKSLPLAFENNEMDRMESSGLSFYQRVREGYLKLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +  R  + D+     S+   I+  V
Sbjct: 180 IAEKKRFVLFDACADPDSIHAQIIQKV 206


>gi|254292084|ref|ZP_04962859.1| thymidylate kinase [Vibrio cholerae AM-19226]
 gi|150421990|gb|EDN13962.1| thymidylate kinase [Vibrio cholerae AM-19226]
          Length = 212

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++   LQ+   D +  TREPGGT  AE  R ++      +E  
Sbjct: 5   FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + SL++ 
Sbjct: 65  DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L++A N
Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   ++D+A S + V  +I
Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198


>gi|290560588|pdb|3LV8|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of A Thymidylate
           Kinase (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str.
           N16961 In Complex With Tmp, Thymidine-5'-Diphosphate And
           Adp
 gi|297343231|pdb|3N2I|A Chain A, 2.25 Angstrom Resolution Crystal Structure Of A
           Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor
           Str. N16961 In C With Thymidine
 gi|297343232|pdb|3N2I|B Chain B, 2.25 Angstrom Resolution Crystal Structure Of A
           Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor
           Str. N16961 In C With Thymidine
          Length = 236

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++   LQ+   D +  TREPGGT  AE  R ++      +E  
Sbjct: 29  FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 88

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + SL++ 
Sbjct: 89  DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 148

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L++A N
Sbjct: 149 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 201

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   ++D+A S + V  +I
Sbjct: 202 SDDSVVMIDAAQSIEQVTADI 222


>gi|126174672|ref|YP_001050821.1| thymidylate kinase [Shewanella baltica OS155]
 gi|125997877|gb|ABN61952.1| thymidylate kinase [Shewanella baltica OS155]
          Length = 208

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 14/207 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63
           FI  EG+EGAGK++ I+L++ F+++      + TREPGGTP AE  R ++ ++   D   
Sbjct: 7   FIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPLC 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++  AAR   V NVI+PAL +G+ +L DR   SS AYQG       L ++++   
Sbjct: 67  DEAECLLIYAARAQLVANVIKPALAKGQWVLGDRHNLSSLAYQGGGRGLMPL-VEAVSNA 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++   PD T+ LDL   +GL R   R  L   E   +D+FER         R  +L +A
Sbjct: 126 TLKGFKPDLTLYLDLDPKLGLTRAAKRGELDRIEQQAIDFFERA--------RATYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            ++ D   ++D++ +   V  +IL ++
Sbjct: 178 -SEDDSIVVIDASQTMAEVHKDILAVL 203


>gi|91793405|ref|YP_563056.1| thymidylate kinase [Shewanella denitrificans OS217]
 gi|91715407|gb|ABE55333.1| thymidylate kinase [Shewanella denitrificans OS217]
          Length = 215

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 113/203 (55%), Gaps = 10/203 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDE 61
           G F+  EG+EGAGK++ ++L+K  L     ++   TREPGGTP AE  R ++ ++   D 
Sbjct: 10  GKFVVIEGLEGAGKSSAVALVKALLTSHTGHEPVCTREPGGTPLAERIRDLVKIADPQDP 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EAE ++  AAR   + NVI+PAL  G+ +L DR   SS AYQG       L +++L 
Sbjct: 70  LCDEAECLLIYAARAQLIANVIKPALQRGEWVLGDRHNLSSLAYQGGGRGLMPL-VNTLS 128

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +Q   PD T+ LD+   +GL R  NR        LD  E++ +   E+ R+ +L +A
Sbjct: 129 QACLQGFKPDLTLYLDIEPSLGLTRAANR------GALDRIEQQALAFFERARETYLQLA 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
            +Q     ++D++ S ++V  +I
Sbjct: 183 -SQDSSILVIDASQSLEAVHHDI 204


>gi|28377570|ref|NP_784462.1| thymidylate kinase [Lactobacillus plantarum WCFS1]
 gi|254555748|ref|YP_003062165.1| thymidylate kinase [Lactobacillus plantarum JDM1]
 gi|308179722|ref|YP_003923850.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258053|sp|Q88YP6|KTHY_LACPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28270402|emb|CAD63305.1| thymidylate kinase [Lactobacillus plantarum WCFS1]
 gi|254044675|gb|ACT61468.1| thymidylate kinase [Lactobacillus plantarum JDM1]
 gi|308045213|gb|ADN97756.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 221

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  ++FEG +GAGKT+ ++ +   LQ +  D + VTREPGG   +EA R ++L    
Sbjct: 1   MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  EA+++AAAR  H+   I+PAL   +++LCDR++DSS AYQG         +  
Sbjct: 61  TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +   +  D T+  D+   +GL R+Q     R++  ++  + + +  H + +  +L 
Sbjct: 121 MNQFATAGLTADLTLYFDVDAAVGLNRIQQH---RQNE-INRLDVEALSFHHRVQAAYLR 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +  + PDR   VD++     V T  L I+
Sbjct: 177 LLADHPDRIKRVDASQPLDQVVTQALEIM 205


>gi|117920213|ref|YP_869405.1| thymidylate kinase [Shewanella sp. ANA-3]
 gi|166223117|sp|A0KW30|KTHY_SHESA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|117612545|gb|ABK47999.1| thymidylate kinase [Shewanella sp. ANA-3]
          Length = 209

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 14/210 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVD 60
           S  FI  EG+EGAGK++ I+L++ F+++      V TREPGGTP AE  R ++ ++   D
Sbjct: 5   SAKFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSD 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E+E ++  AAR   V NVI+PAL EGK +L DR   SS AYQG       L ++++
Sbjct: 65  PLCDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMPL-VEAV 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
              +++   PD T+ LDL   +GL R   R  L   E   +D+FER         R  +L
Sbjct: 124 SNATLKGFKPDLTLYLDLDPKLGLLRAAKRGELDRIEQQAIDFFERA--------RATYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +A ++ +R  ++D++ +   V  +IL ++
Sbjct: 176 KLA-SEDERIVVIDASQTMAEVHKDILAVL 204


>gi|157828901|ref|YP_001495143.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933625|ref|YP_001650414.1| thymidylate kinase [Rickettsia rickettsii str. Iowa]
 gi|166223112|sp|A8GTB0|KTHY_RICRS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030838|sp|B0BUU8|KTHY_RICRO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157801382|gb|ABV76635.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908712|gb|ABY73008.1| thymidylate kinase [Rickettsia rickettsii str. Iowa]
          Length = 203

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E     AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELFQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P+R   + ++
Sbjct: 175 SNRFPERIKTIKAS 188


>gi|208780179|ref|ZP_03247521.1| thymidylate kinase [Francisella novicida FTG]
 gi|208743828|gb|EDZ90130.1| thymidylate kinase [Francisella novicida FTG]
          Length = 209

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D E  +
Sbjct: 5   FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +L +  
Sbjct: 65  DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    PD  I LD+   +GL+R Q   S    E A L++F R         R +F D+ +
Sbjct: 125 LNGCEPDLVIYLDIDPMLGLQRAQKVGSPDRIEKAGLEFFNRT--------RNVFKDLVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +  +   I D+A S Q V   I  I+
Sbjct: 177 DSDNAIEI-DAAKSIQEVEKQIYLIL 201


>gi|53723614|ref|YP_103080.1| thymidylate kinase [Burkholderia mallei ATCC 23344]
 gi|67640223|ref|ZP_00439038.1| dTMP kinase [Burkholderia mallei GB8 horse 4]
 gi|121601290|ref|YP_993235.1| thymidylate kinase [Burkholderia mallei SAVP1]
 gi|124386529|ref|YP_001029320.1| thymidylate kinase [Burkholderia mallei NCTC 10229]
 gi|126440272|ref|YP_001059316.1| thymidylate kinase [Burkholderia pseudomallei 668]
 gi|126448046|ref|YP_001080743.1| thymidylate kinase [Burkholderia mallei NCTC 10247]
 gi|166998743|ref|ZP_02264597.1| dTMP kinase [Burkholderia mallei PRL-20]
 gi|167719162|ref|ZP_02402398.1| thymidylate kinase [Burkholderia pseudomallei DM98]
 gi|254178271|ref|ZP_04884926.1| thymidylate kinase [Burkholderia mallei ATCC 10399]
 gi|254200026|ref|ZP_04906392.1| thymidylate kinase [Burkholderia mallei FMH]
 gi|254206360|ref|ZP_04912712.1| thymidylate kinase [Burkholderia mallei JHU]
 gi|254358225|ref|ZP_04974498.1| thymidylate kinase [Burkholderia mallei 2002721280]
 gi|59798166|sp|Q62JN9|KTHY_BURMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221726|sp|A3MKF7|KTHY_BURM7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221727|sp|A2SBK1|KTHY_BURM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221728|sp|A1V4T2|KTHY_BURMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221730|sp|A3NAE5|KTHY_BURP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52427037|gb|AAU47630.1| thymidylate kinase [Burkholderia mallei ATCC 23344]
 gi|121230100|gb|ABM52618.1| thymidylate kinase [Burkholderia mallei SAVP1]
 gi|124294549|gb|ABN03818.1| dTMP kinase [Burkholderia mallei NCTC 10229]
 gi|126219765|gb|ABN83271.1| dTMP kinase [Burkholderia pseudomallei 668]
 gi|126240916|gb|ABO04009.1| dTMP kinase [Burkholderia mallei NCTC 10247]
 gi|147749622|gb|EDK56696.1| thymidylate kinase [Burkholderia mallei FMH]
 gi|147753803|gb|EDK60868.1| thymidylate kinase [Burkholderia mallei JHU]
 gi|148027352|gb|EDK85373.1| thymidylate kinase [Burkholderia mallei 2002721280]
 gi|160699310|gb|EDP89280.1| thymidylate kinase [Burkholderia mallei ATCC 10399]
 gi|238520911|gb|EEP84367.1| dTMP kinase [Burkholderia mallei GB8 horse 4]
 gi|243065097|gb|EES47283.1| dTMP kinase [Burkholderia mallei PRL-20]
          Length = 206

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVDS+ S   +   +  ++
Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKQLEGVL 203


>gi|300769770|ref|ZP_07079652.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|300492678|gb|EFK27864.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 225

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  ++FEG +GAGKT+ ++ +   LQ +  D + VTREPGG   +EA R ++L    
Sbjct: 5   MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  EA+++AAAR  H+   I+PAL   +++LCDR++DSS AYQG         +  
Sbjct: 65  TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 124

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +   +  D T+  D+   +GL R+Q     R++  ++  + + +  H + +  +L 
Sbjct: 125 MNQFATAGLTADLTLYFDVDAAVGLNRIQQH---RQNE-INRLDVEALSFHHRVQAAYLR 180

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +  + PDR   VD++     V T  L I+
Sbjct: 181 LLADHPDRIKRVDASQPLDQVVTQALEIM 209


>gi|119357439|ref|YP_912083.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266]
 gi|166221736|sp|A1BGY2|KTHY_CHLPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|119354788|gb|ABL65659.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266]
          Length = 219

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 4/192 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L+  L +   +    REPGGT  AE  R +LL     E  A
Sbjct: 1   MLITFEGIDGAGKSTQIKKLQTVLNKAGVESVTLREPGGTEVAEKIRSILLESR-HEISA 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A R + V+ VI PAL    +++ DRF DS+ AYQG         L+++   S
Sbjct: 60  VGELLLFSATRAELVQQVIIPALQTDAVVILDRFYDSTRAYQGYGRGIDLTILETIIAFS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              ++PD T  LD+  +  + R  ++ SL    E++ LD  ER  +  + K R  + +I 
Sbjct: 120 TFNLIPDVTFYLDIKPEDAMIRKNSKKSLPLAFENSDLDRMERSGLEFYSKVRNGYFEII 179

Query: 182 RNQPDRCHIVDS 193
           R++  R  ++++
Sbjct: 180 RSEQHRFKVLNA 191


>gi|76788910|ref|YP_327996.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13]
 gi|237802612|ref|YP_002887806.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804534|ref|YP_002888688.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310988|ref|ZP_05353558.1| thymidylate kinase [Chlamydia trachomatis 6276]
 gi|255317289|ref|ZP_05358535.1| thymidylate kinase [Chlamydia trachomatis 6276s]
 gi|123607082|sp|Q3KMH4|KTHY_CHLTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|76167440|gb|AAX50448.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13]
 gi|231272834|emb|CAX09743.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273846|emb|CAX10636.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT]
 gi|296435703|gb|ADH17877.1| thymidylate kinase [Chlamydia trachomatis G/9768]
 gi|296436627|gb|ADH18797.1| thymidylate kinase [Chlamydia trachomatis G/11222]
 gi|296437563|gb|ADH19724.1| thymidylate kinase [Chlamydia trachomatis G/11074]
 gi|297140062|gb|ADH96820.1| thymidylate kinase [Chlamydia trachomatis G/9301]
          Length = 203

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 9/191 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT  I  L + L  +  ++  TREPGG    ++ R +LL     +   
Sbjct: 1   MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
            AE ++F AAR  H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    
Sbjct: 60  YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +  +PD T +LD+P   GL R   +        LD FE+K  + H+  R+ FL +A 
Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173

Query: 183 NQPDRCHIVDS 193
             PDR  ++D+
Sbjct: 174 KAPDRYKVLDA 184


>gi|331266594|ref|YP_004326224.1| thymidylate kinase [Streptococcus oralis Uo5]
 gi|326683266|emb|CBZ00884.1| thymidylate kinase [Streptococcus oralis Uo5]
          Length = 212

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALGAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDTTKAVLFD 206


>gi|118498162|ref|YP_899212.1| thymidylate kinase [Francisella tularensis subsp. novicida U112]
 gi|194324335|ref|ZP_03058108.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE]
 gi|254373508|ref|ZP_04988995.1| thymidylate kinase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374970|ref|ZP_04990450.1| thymidylate kinase [Francisella novicida GA99-3548]
 gi|166221743|sp|A0Q893|KTHY_FRATN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118424068|gb|ABK90458.1| thymidylate kinase [Francisella novicida U112]
 gi|151571233|gb|EDN36887.1| thymidylate kinase [Francisella novicida GA99-3549]
 gi|151572688|gb|EDN38342.1| thymidylate kinase [Francisella novicida GA99-3548]
 gi|194321400|gb|EDX18885.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE]
          Length = 209

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D E  +
Sbjct: 5   FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +L +  
Sbjct: 65  DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    PD  I LD+   +GL+R Q   S    E A L++F R         R +F D+ +
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RNVFKDLVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +  +   I D+A S Q V   I  I+
Sbjct: 177 DSDNAIEI-DAAKSIQEVEKQIYLIL 201


>gi|295096208|emb|CBK85298.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 213

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L      D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVDTLTSLGVADMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL EGK ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAEGKWVIGDRHDLSTQAYQGGGRGIDQAMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A  Q      +D+  S + V  +I   V + +Q++
Sbjct: 177 LA-GQDKTIRTIDATQSLEDVTRDIQQTVTQWLQEQ 211


>gi|113970001|ref|YP_733794.1| thymidylate kinase [Shewanella sp. MR-4]
 gi|114047236|ref|YP_737786.1| thymidylate kinase [Shewanella sp. MR-7]
 gi|123325106|sp|Q0HJN0|KTHY_SHESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123326608|sp|Q0HVX6|KTHY_SHESR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|113884685|gb|ABI38737.1| thymidylate kinase [Shewanella sp. MR-4]
 gi|113888678|gb|ABI42729.1| thymidylate kinase [Shewanella sp. MR-7]
          Length = 209

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 118/210 (56%), Gaps = 14/210 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVD 60
           S  FI  EG+EGAGK++ I+L++ F+++      V TREPGGTP AE  R ++ ++   D
Sbjct: 5   SAKFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSD 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E+E ++  AAR   V NVI+PAL EGK +L DR   SS AYQG       L ++++
Sbjct: 65  PLCDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMPL-VEAV 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
              +++   PD T+ LDL   +GL+R   R  L   E   +D+FER         R  +L
Sbjct: 124 SNATLKGFKPDLTLYLDLDPKLGLQRAAKRGELDRIEQQAIDFFERA--------RATYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +A ++ ++  ++D++ +   V  +IL ++
Sbjct: 176 KLA-SEDEQIVVIDASQTMAEVHKDILAVL 204


>gi|218709023|ref|YP_002416644.1| thymidylate kinase [Vibrio splendidus LGP32]
 gi|218322042|emb|CAV18087.1| Thymidylate kinase [Vibrio splendidus LGP32]
          Length = 210

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 17/210 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+     D+  TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLV----K 56

Query: 60  DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +E   E      E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG       
Sbjct: 57  EEHEGEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             ++SL+  ++    PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R
Sbjct: 117 STMESLKATTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           + +L+IA  Q D   ++++    + VA +I
Sbjct: 171 ERYLEIA-GQDDSVLVINAQQEIEQVAADI 199


>gi|238651001|ref|YP_002916857.1| thymidylate kinase [Rickettsia peacockii str. Rustic]
 gi|259494280|sp|C4K2K8|KTHY_RICPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238625099|gb|ACR47805.1| thymidylate kinase [Rickettsia peacockii str. Rustic]
          Length = 203

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            +  +  +MPD T  +D+  D  +KRV +R
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR 150


>gi|307706440|ref|ZP_07643249.1| thymidylate kinase [Streptococcus mitis SK321]
 gi|307618150|gb|EFN97308.1| thymidylate kinase [Streptococcus mitis SK321]
          Length = 212

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L+    
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVVVLRTREPGGVLIGEKIREVILNPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +  R   +D++   + V      ++++
Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFD 206


>gi|294141343|ref|YP_003557321.1| thymidylate kinase [Shewanella violacea DSS12]
 gi|293327812|dbj|BAJ02543.1| thymidylate kinase [Shewanella violacea DSS12]
          Length = 210

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 14/211 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59
           N   FI  EG+EGAGK++ ISL+  F+++    V V TREPGGTP AE  R ++ ++   
Sbjct: 5   NKSKFIVIEGLEGAGKSSAISLVGDFIEKHTGLVPVCTREPGGTPLAERMRDLIKIADET 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++  AAR   V NVI+PAL  G  +L DR   SS AYQG       L +  
Sbjct: 65  DPLCDEAECLLLYAARAQLVANVIKPALNRGAWVLGDRHNLSSLAYQGGGRGLMPL-VQV 123

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIF 177
           L + ++ +  PD T+ LD+    GL+R   R  L   E   LD+FER         R  F
Sbjct: 124 LSKATLGDFKPDLTLYLDIDPAQGLQRAAKRGELDRIEKQALDFFERA--------RATF 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L  A+ + D   ++D+  +   V  +IL ++
Sbjct: 176 LSFAK-EDDTIAVIDAGQTMAEVHKDILALL 205


>gi|89256933|ref|YP_514295.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS]
 gi|156503123|ref|YP_001429188.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009997|ref|ZP_02274928.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368198|ref|ZP_04984218.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257]
 gi|254369798|ref|ZP_04985808.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|290953993|ref|ZP_06558614.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1]
 gi|295312612|ref|ZP_06803364.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1]
 gi|122500313|sp|Q2A1V7|KTHY_FRATH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221742|sp|A7NE29|KTHY_FRATF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|89144764|emb|CAJ80099.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS]
 gi|134254008|gb|EBA53102.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257]
 gi|156253726|gb|ABU62232.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122757|gb|EDO66886.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 209

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D E  +
Sbjct: 5   FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +L +  
Sbjct: 65  DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    PD  I LD+   +GL+R Q   S    E A L++F R         R++F D+ +
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +  +   I D+A S Q V   I  I+
Sbjct: 177 DLDNAIEI-DAAKSIQEVEKQIYLIL 201


>gi|53719072|ref|YP_108058.1| thymidylate kinase [Burkholderia pseudomallei K96243]
 gi|76810598|ref|YP_333838.1| thymidylate kinase [Burkholderia pseudomallei 1710b]
 gi|126454444|ref|YP_001066584.1| thymidylate kinase [Burkholderia pseudomallei 1106a]
 gi|167845304|ref|ZP_02470812.1| thymidylate kinase [Burkholderia pseudomallei B7210]
 gi|242317737|ref|ZP_04816753.1| dTMP kinase [Burkholderia pseudomallei 1106b]
 gi|254189148|ref|ZP_04895659.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197999|ref|ZP_04904421.1| thymidylate kinase [Burkholderia pseudomallei S13]
 gi|254260912|ref|ZP_04951966.1| dTMP kinase [Burkholderia pseudomallei 1710a]
 gi|59798178|sp|Q63V08|KTHY_BURPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123598846|sp|Q3JRG5|KTHY_BURP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221729|sp|A3NW63|KTHY_BURP0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52209486|emb|CAH35438.1| putative thymidylate kinase [Burkholderia pseudomallei K96243]
 gi|76580051|gb|ABA49526.1| thymidylate kinase [Burkholderia pseudomallei 1710b]
 gi|126228086|gb|ABN91626.1| thymidylate kinase [Burkholderia pseudomallei 1106a]
 gi|157936827|gb|EDO92497.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237]
 gi|169654740|gb|EDS87433.1| thymidylate kinase [Burkholderia pseudomallei S13]
 gi|242140976|gb|EES27378.1| dTMP kinase [Burkholderia pseudomallei 1106b]
 gi|254219601|gb|EET08985.1| dTMP kinase [Burkholderia pseudomallei 1710a]
          Length = 206

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  IVDS+ S   +   +  ++
Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRRQLEGVL 203


>gi|134277826|ref|ZP_01764541.1| thymidylate kinase [Burkholderia pseudomallei 305]
 gi|167823760|ref|ZP_02455231.1| thymidylate kinase [Burkholderia pseudomallei 9]
 gi|217421693|ref|ZP_03453197.1| dTMP kinase [Burkholderia pseudomallei 576]
 gi|226197216|ref|ZP_03792793.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9]
 gi|237812640|ref|YP_002897091.1| dTMP kinase [Burkholderia pseudomallei MSHR346]
 gi|134251476|gb|EBA51555.1| thymidylate kinase [Burkholderia pseudomallei 305]
 gi|217395435|gb|EEC35453.1| dTMP kinase [Burkholderia pseudomallei 576]
 gi|225930595|gb|EEH26605.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9]
 gi|237504430|gb|ACQ96748.1| dTMP kinase [Burkholderia pseudomallei MSHR346]
          Length = 206

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 15/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +   R       R +A + D FE +      + R 
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR-------RGAARMPDKFESESDAFFARTRA 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A   P R  IVDS+ S   +   +  ++
Sbjct: 171 EYLRRAHEAPHRFAIVDSSESIPQIRKQLEGVL 203


>gi|32477522|ref|NP_870516.1| thymidylate kinase [Rhodopirellula baltica SH 1]
 gi|46576444|sp|Q7UIM1|KTHY_RHOBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|32448076|emb|CAD77593.1| thymidylate kinase [Rhodopirellula baltica SH 1]
          Length = 245

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 15/207 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ +GI+G GK++ I +L   L+ +  +V   R+PG T      R +LL   + E  
Sbjct: 48  GRLITLDGIDGVGKSSQIEILAERLRSEGRNVLCVRDPGSTDLGTKLRAMLLDSDL-EMH 106

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSL 120
              EA++F A+R + +E+ +R AL +G  ++ DRFL ++  YQ   GE D+ Q L+   L
Sbjct: 107 RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDA-QTLW--QL 163

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++   V PD T++LDLP +I ++RV       ES  +DY          K RQ FLD 
Sbjct: 164 GRLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYM--------AKVRQAFLDE 215

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
             N   R H++D++ + + VA  I  I
Sbjct: 216 LPNAGGRTHVIDASGTIEEVAETIAAI 242


>gi|28493662|ref|NP_787823.1| thymidylate kinase [Tropheryma whipplei str. Twist]
 gi|28572855|ref|NP_789635.1| nucleotide kinase [Tropheryma whipplei TW08/27]
 gi|46576523|sp|Q83FM3|KTHY_TROWT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576525|sp|Q83HB8|KTHY_TROW8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28410988|emb|CAD67373.1| putative nucleotide kinase [Tropheryma whipplei TW08/27]
 gi|28476704|gb|AAO44792.1| thymidylate kinase [Tropheryma whipplei str. Twist]
          Length = 199

 Score =  109 bits (272), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 15/201 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEGI+G+GKT  ++    FL+     V +TREPG        R  +L+  +D    
Sbjct: 1   MFVTFEGIDGSGKTAQLTAAGEFLKASGKQVVLTREPG---TISCIRDYVLASDMD---I 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++++A R +++   + PAL  GK++L DR+LDS  AYQ   +      +  L E S
Sbjct: 55  RTEALLYSADRAENIAKNVIPALNAGKVVLQDRYLDSFLAYQLADNKLVETDIMRLFEFS 114

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q + PD T++ DL      +R++NR         D  ERK +  H K R I+L ++ + 
Sbjct: 115 SQGLRPDLTLLFDLTPACAQERLENR---------DRIERKPIDFHSKVRNIYLKLSADN 165

Query: 185 PDRCHIVDSAHSFQSVATNIL 205
            DR  ++D++ SF  +   ++
Sbjct: 166 TDRIRVIDASQSFSKIHQQVI 186


>gi|148980539|ref|ZP_01816112.1| thymidylate kinase [Vibrionales bacterium SWAT-3]
 gi|145961192|gb|EDK26507.1| thymidylate kinase [Vibrionales bacterium SWAT-3]
          Length = 210

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 17/210 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+    +  V TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKASGVEELVNTREPGGTVLAEKMRSLV----K 56

Query: 60  DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +E   E      E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG       
Sbjct: 57  EEHEGEQLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             ++SL+  ++ +  PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R
Sbjct: 117 TTMESLKATTLGDFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           + +L+IA  Q D   ++++    + VA +I
Sbjct: 171 ERYLEIA-AQDDSVLVINAEQEIEQVAADI 199


>gi|306829296|ref|ZP_07462486.1| thymidylate kinase [Streptococcus mitis ATCC 6249]
 gi|304428382|gb|EFM31472.1| thymidylate kinase [Streptococcus mitis ATCC 6249]
          Length = 212

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFD 206


>gi|322411208|gb|EFY02116.1| thymidylate kinase [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 211

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 5/201 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  +   L +R + ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + PD T+  D+P +IGL R+    + RE   LD    + V +H++ R+ +L 
Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAANKN-REVNRLDL---EAVDMHQRVREGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +A+ QP+R   +D++   + V
Sbjct: 177 LAQEQPNRIVTIDASKPLEDV 197


>gi|251781863|ref|YP_002996165.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242390492|dbj|BAH80951.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 211

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 5/201 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  +   L +R + ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + PD T+  D+P +IGL R+    + RE   LD    + V +H++ R+ +L 
Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAANKN-REVNRLDL---EAVDMHQRVREGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +A+ QP+R   +D++   + V
Sbjct: 177 LAQEQPNRIVTIDASKPLEDV 197


>gi|189347011|ref|YP_001943540.1| dTMP kinase [Chlorobium limicola DSM 245]
 gi|238692153|sp|B3EDD6|KTHY_CHLL2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189341158|gb|ACD90561.1| dTMP kinase [Chlorobium limicola DSM 245]
          Length = 219

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 4/209 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L++ L   + D    REPGGT  AE  R +LL     E   
Sbjct: 1   MLITFEGIDGAGKSTQIRKLQKLLIGAHIDSITLREPGGTEVAEKIRQILLESR-HEISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V+ VI PA+  G  ++ DRF DS+ AYQG       + L ++  +S
Sbjct: 60  IGELLLFSASRAELVQQVILPAIDNGTTVILDRFFDSTIAYQGYGREIDQVMLQTIITLS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  SL    + + LD  ER  +    K RQ +LDI 
Sbjct: 120 TFSLQPDITFYLDISPENALMRKFSEKSLPIAFDESELDRMERSGLDFFRKVRQGYLDII 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                R  ++D+    Q +   I+  + E
Sbjct: 180 HKNERRFVLLDALDDPQMIHKRIIASLKE 208


>gi|322374522|ref|ZP_08049036.1| dTMP kinase [Streptococcus sp. C300]
 gi|321280022|gb|EFX57061.1| dTMP kinase [Streptococcus sp. C300]
          Length = 212

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALKAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
              + +R   +D++   + V
Sbjct: 177 LDKEGNRIVKIDASLPLEQV 196


>gi|124262780|ref|YP_001023250.1| thymidylate kinase [Methylibium petroleiphilum PM1]
 gi|124262026|gb|ABM97015.1| thymidylate kinase [Methylibium petroleiphilum PM1]
          Length = 224

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 10/193 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+   ++GAGK+T + ++++R       +V VTREPGG+P AE  R ++L    D  
Sbjct: 8   GRMITLSALDGAGKSTQVQTVVERLRDYYGIEVVVTREPGGSPVAERLRELVLHG--DVI 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++F AAR DH+  VIRPAL  G+ ++CDRF+D S+AYQ           ++L++
Sbjct: 66  DPVAEMMIFFAARQDHLAQVIRPALQAGRWVVCDRFVDCSWAYQVRGRGLARAEFEALEK 125

Query: 123 ISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++   PD T +LD+ PV      V         A  D FER+D+    + RQ + +  
Sbjct: 126 MVLRGWRPDLTFLLDIEPV------VAAARRRGRGAEADRFERQDLEFFGRVRQGYFERM 179

Query: 182 RNQPDRCHIVDSA 194
              P+R  ++D+A
Sbjct: 180 VADPERFRVIDAA 192


>gi|327543342|gb|EGF29771.1| thymidylate kinase [Rhodopirellula baltica WH47]
          Length = 225

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 15/207 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ +GI+G GK++ I +L   L+ +   V   R+PG T      R +LL   + E  
Sbjct: 24  GRLITLDGIDGVGKSSQIEILAERLRSEGRQVLCVRDPGSTDLGTKLRAMLLDSDL-EMH 82

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSL 120
              EA++F A+R + +E+ +R AL +G  ++ DRFL ++  YQ   GE D+ Q L+   L
Sbjct: 83  RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDA-QTLW--QL 139

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++   V PD T++LDLP +I ++RV       ES  +DY          K RQ FLD 
Sbjct: 140 GRLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYM--------AKVRQAFLDE 191

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
             N   R H++D++ + + VA  I  I
Sbjct: 192 LPNAGGRTHVIDASGTIEEVAETIAAI 218


>gi|254524318|ref|ZP_05136373.1| thymidylate kinase [Stenotrophomonas sp. SKA14]
 gi|219721909|gb|EED40434.1| thymidylate kinase [Stenotrophomonas sp. SKA14]
          Length = 221

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 16/215 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDE 61
           F+S EG EGAGKTT I+ ++  L+   ++V +TREPGGTP AE  R ++L        + 
Sbjct: 11  FVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AEAE ++  AAR  HV  VI+PAL  G  +L DRF DSSYAYQG        ++  L+
Sbjct: 71  LSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADLE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178
             +V  +    T++LD+ V +G  R   R  +  R ES   D+F+R         R +F 
Sbjct: 131 RRAVGLLP-GLTLLLDVDVAVGRARANGRDLWPDRIESEQDDFFQRV--------RAVFR 181

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             A+  P R  ++D+    + VA +++  V   +Q
Sbjct: 182 SRAQLDPQRFALIDAGQVQERVAADVVARVERWLQ 216


>gi|329120408|ref|ZP_08249074.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327462092|gb|EGF08420.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 207

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 7/188 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+G+GK+TH++ ++ +   +   V  TREPGGTP  E  R +LL     + G  
Sbjct: 5   FITLDGIDGSGKSTHLAAMRDWFAARGLPVLFTREPGGTPLGEELRRLLLDPAA-QVGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+++VI PAL +G  ++ DRF D+++AYQG         + +L+    
Sbjct: 64  TETLLMFAARQQHLDDVILPALEQGVHVVSDRFTDATFAYQGGGRGLPEADIAALEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           + + PD T+ILD+P ++   RV       ++   D FE++      + RQ +LD A   P
Sbjct: 124 RGLRPDLTLILDVPAEVSFARVA------KARDKDRFEQEQAAFFLRVRQAYLDRAAADP 177

Query: 186 DRCHIVDS 193
            R  ++DS
Sbjct: 178 QRYRVIDS 185


>gi|306825448|ref|ZP_07458788.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432386|gb|EFM35362.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 212

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
              + +R   +D++   + V
Sbjct: 177 LDKEGNRIVKIDASLPLEEV 196


>gi|229528965|ref|ZP_04418355.1| thymidylate kinase [Vibrio cholerae 12129(1)]
 gi|229332739|gb|EEN98225.1| thymidylate kinase [Vibrio cholerae 12129(1)]
          Length = 212

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 110/201 (54%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++   LQ+   D +  TREPGGT  AE  R ++      +E  
Sbjct: 5   FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + SL++ 
Sbjct: 65  DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L++A N
Sbjct: 125 ALGAFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   ++D+A S + V  +I
Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198


>gi|115315297|ref|YP_764020.1| thymidylate kinase [Francisella tularensis subsp. holarctica OSU18]
 gi|122324708|sp|Q0BKK1|KTHY_FRATO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|115130196|gb|ABI83383.1| dTMP kinase [Francisella tularensis subsp. holarctica OSU18]
          Length = 209

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D E  +
Sbjct: 5   FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +L    
Sbjct: 65  DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNNNF 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    PD  I LD+   +GL+R Q   S    E A L++F R         R++F D+ +
Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           +  +   I D+A S Q V   I  I+
Sbjct: 177 DLDNAIEI-DAAKSIQEVEKQIYLIL 201


>gi|27366274|ref|NP_761802.1| thymidylate kinase [Vibrio vulnificus CMCP6]
 gi|37679464|ref|NP_934073.1| thymidylate kinase [Vibrio vulnificus YJ016]
 gi|320156783|ref|YP_004189162.1| thymidylate kinase [Vibrio vulnificus MO6-24/O]
 gi|31340187|sp|Q8D8H5|KTHY_VIBVU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576399|sp|Q7MLZ6|KTHY_VIBVY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|27362475|gb|AAO11329.1| thymidylate kinase [Vibrio vulnificus CMCP6]
 gi|37198208|dbj|BAC94044.1| thymidylate kinase [Vibrio vulnificus YJ016]
 gi|319932095|gb|ADV86959.1| thymidylate kinase [Vibrio vulnificus MO6-24/O]
          Length = 212

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 118/222 (53%), Gaps = 20/222 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGK+T I ++L    Q    ++  TREPGGTP AE  R ++     
Sbjct: 1   MKQAKFIVIEGLEGAGKSTAIQTVLDTLRQAGINEIAQTREPGGTPLAEKMRALV----K 56

Query: 60  DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +E   E      E ++  AAR+  VENVI+PAL EGK ++ DR   SS AYQG       
Sbjct: 57  EEHPGEHLHDMTELLLLYAARVQLVENVIKPALHEGKWVVGDRHDLSSQAYQGGGRQIDA 116

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             + +L++ ++ E  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R
Sbjct: 117 TLMKNLRDTALGEFKPAFTLYMDIDPKVGLERARGR------GELDRIEKMDISFFERTR 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI---LNIVWELVQ 213
           Q +L++A++      I ++  S + VA +I   LN+  E +Q
Sbjct: 171 QRYLELAKSDASIVTI-NAEQSIEQVANDIRSALNLWLEQLQ 211


>gi|270292959|ref|ZP_06199170.1| dTMP kinase [Streptococcus sp. M143]
 gi|270278938|gb|EFA24784.1| dTMP kinase [Streptococcus sp. M143]
          Length = 212

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
              + +R   +D++   + V
Sbjct: 177 LDKEGNRIVKIDASLPLEQV 196


>gi|282853298|ref|ZP_06262635.1| dTMP kinase [Propionibacterium acnes J139]
 gi|282582751|gb|EFB88131.1| dTMP kinase [Propionibacterium acnes J139]
 gi|314922387|gb|EFS86218.1| thymidylate kinase [Propionibacterium acnes HL001PA1]
 gi|314965424|gb|EFT09523.1| thymidylate kinase [Propionibacterium acnes HL082PA2]
 gi|314982835|gb|EFT26927.1| thymidylate kinase [Propionibacterium acnes HL110PA3]
 gi|315091154|gb|EFT63130.1| thymidylate kinase [Propionibacterium acnes HL110PA4]
 gi|315104893|gb|EFT76869.1| thymidylate kinase [Propionibacterium acnes HL050PA2]
 gi|327329219|gb|EGE70979.1| dTMP kinase [Propionibacterium acnes HL103PA1]
          Length = 214

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 9/210 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG         +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++++  S + ++  I   V  L+
Sbjct: 183 AHPQRYLVLNARKSRKEISEAICQRVTGLL 212


>gi|167738165|ref|ZP_02410939.1| thymidylate kinase [Burkholderia pseudomallei 14]
 gi|167815351|ref|ZP_02447031.1| thymidylate kinase [Burkholderia pseudomallei 91]
 gi|167893848|ref|ZP_02481250.1| thymidylate kinase [Burkholderia pseudomallei 7894]
 gi|167902298|ref|ZP_02489503.1| thymidylate kinase [Burkholderia pseudomallei NCTC 13177]
 gi|167910539|ref|ZP_02497630.1| thymidylate kinase [Burkholderia pseudomallei 112]
 gi|167918566|ref|ZP_02505657.1| thymidylate kinase [Burkholderia pseudomallei BCC215]
 gi|254179465|ref|ZP_04886064.1| thymidylate kinase [Burkholderia pseudomallei 1655]
 gi|254297346|ref|ZP_04964799.1| thymidylate kinase [Burkholderia pseudomallei 406e]
 gi|157807497|gb|EDO84667.1| thymidylate kinase [Burkholderia pseudomallei 406e]
 gi|184210005|gb|EDU07048.1| thymidylate kinase [Burkholderia pseudomallei 1655]
          Length = 206

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 15/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +   R       R +A + D FE +      + R 
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR-------RGAARMPDKFESESDAFFARTRA 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A   P R  IVDS+ S   +   +  ++
Sbjct: 171 EYLRRAHEAPHRFAIVDSSESIPQIRKRLEGVL 203


>gi|224541623|ref|ZP_03682162.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525461|gb|EEF94566.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM
           15897]
          Length = 211

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 16/215 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG+GKTT   +L +    + Y++  +REPGG   AE  R V+      +  A
Sbjct: 10  LFITFEGGEGSGKTTIAKMLHKQFIEEGYNITFSREPGGVDIAEQIRDVITDVNNTKMDA 69

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  H+   + P L E  I++CDRF+DSS  YQG     + + +D++  ++
Sbjct: 70  RTEALLYAASRRQHLVEKVLPVLKEDGIVICDRFIDSSLVYQG---IGRGIGVDNIYNMN 126

Query: 125 V---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     ++PD TI  D+  ++ LKR+      RE   LD  E  D   H K  + +  I 
Sbjct: 127 LFATDGILPDLTIFFDVKPEVALKRITGD---REVNRLD-LESLD--FHHKVYEGYQMIC 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              PDR   VD++   + V       V+E+V+ R+
Sbjct: 181 DKFPDRIVKVDASLPVEEVYRQ----VYEIVKDRL 211


>gi|86742981|ref|YP_483381.1| thymidylate kinase [Frankia sp. CcI3]
 gi|86569843|gb|ABD13652.1| thymidylate kinase [Frankia sp. CcI3]
          Length = 730

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 9/209 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EGI+GAGK+T + LL+ +L     +V VT E GGT      R +LL   V    
Sbjct: 505 GLFIAIEGIDGAGKSTQVELLRTWLASSGREVVVTSESGGTALGTGLRELLLDPTV-RLH 563

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++ AA R +HV  VI PAL  G I++ DR++DS  A+Q    +     L  L + 
Sbjct: 564 PRTEALLTAADRAEHVAQVIEPALARGAIVITDRYVDSFIAFQSVSQALSTDELSVLTQW 623

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ--------NRYSLRESACLDYFERKDVMIHEKRRQ 175
           +   ++PD T++LDLP +I L+R +                   +  +   +    + R 
Sbjct: 624 ATHALLPDVTVLLDLPAEIVLRRARMTAYPDPPPGPPGPPDGPAEADDAGKLTFQGRVRD 683

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            F  +A+ +PDR   +D+  S + +   I
Sbjct: 684 TFRRLAQKEPDRYLPLDATRSPEEIHAEI 712


>gi|15892970|ref|NP_360684.1| thymidylate kinase [Rickettsia conorii str. Malish 7]
 gi|23821795|sp|Q92GS5|KTHY_RICCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|15620166|gb|AAL03585.1| thymidylate kinase [Rickettsia conorii str. Malish 7]
          Length = 203

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF++S+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIESTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P+R   + ++
Sbjct: 175 SNRFPERIKTIKAS 188


>gi|313672881|ref|YP_004050992.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939637|gb|ADR18829.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 214

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 8/212 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            + + +GI+G GKTT I LL  +L   N   +VT+EPGGT      R +L+S        
Sbjct: 4   FYAAIDGIDGCGKTTQIKLLSDYLAGLNIPFYVTKEPGGTDVGGILRKILISKDY-HVEP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++++A RL+H + V+ P + +G  ++ DRF+ S+YAYQ          LD L+ IS
Sbjct: 63  ETELLLYSADRLEHQKKVVIPNMHKGYSVISDRFISSTYAYQVFGRGLDRSLLDFLRNIS 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD---YFERKDVMIHEKRRQIFLDIA 181
           V  + PD TII+D+   + L+R +NR  L++   ++    FE  ++  + K R  FL  A
Sbjct: 123 VS-IYPDLTIIIDIEPSVALERAKNR--LKKHGLMEKEGKFESLNIDFYAKVRDGFLWYA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            N  +   ++D   S +S+  +I N + E + 
Sbjct: 180 DNFSNVV-VLDGNKSIESLFGDIKNRINEFIN 210


>gi|241895200|ref|ZP_04782496.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313]
 gi|241871506|gb|EER75257.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313]
          Length = 214

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 21/211 (9%)

Query: 3   SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGV 59
           SG FI+FEG +GAGKT+ + ++++R        + +TREPGG  +  AEA R V+L   +
Sbjct: 2   SGTFITFEGPDGAGKTSVLRAIVERLAPLLGDKLVLTREPGGKDSQVAEAIRDVVLDPNL 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AA+R  H+ + + PAL   K+++ DR++DSS AYQG     + L +++
Sbjct: 62  PSMDAWTEALLYAASRRQHLVDTVLPALAADKVVVSDRYVDSSIAYQG---GGRRLGIEA 118

Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDV---MIHEK 172
           + EI   + + +MP  TI LD+  ++GL+R+Q NR         D   R DV     H++
Sbjct: 119 VTEINQFATKGIMPTATIYLDIRPEVGLQRIQENRQ--------DEINRLDVEKLSFHQR 170

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
               +  +A   P+R  I+++      V T+
Sbjct: 171 VTDAYHQLATQYPERFLIINAEQDLADVITD 201


>gi|189219648|ref|YP_001940289.1| Thymidylate kinase [Methylacidiphilum infernorum V4]
 gi|189186506|gb|ACD83691.1| Thymidylate kinase [Methylacidiphilum infernorum V4]
          Length = 225

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 11/210 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEG EG GKTT I LLK+ L+     V + REPG T   E  R +L    +  +   
Sbjct: 20  FISFEGSEGCGKTTQIRLLKKRLEDHGQKVVIVREPGTTKLGEKLRRILKHSSLSLYPL- 78

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E  +F A+R++  + VI P + +   +L DRF+DS+  YQG         ++ L E++ 
Sbjct: 79  TELFLFEASRVELTKRVIEPEMAKNSWILADRFVDSTLVYQGIIRGIPLKTIEELNELAS 138

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARN 183
             + P  TI+LD+P      R++ R   +       D FE+      E+ RQ +L++A+ 
Sbjct: 139 SGIKPTLTILLDIPHQCSRSRIKKRDHKKTITDRLQDEFEKS----LEQIRQAYLELAQR 194

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +P R +IV    S Q ++     ++WE V+
Sbjct: 195 EPHRFYIVKGTDSPQFISA----LIWEKVE 220


>gi|326562040|gb|EGE12369.1| thymidylate kinase [Moraxella catarrhalis 46P47B1]
 gi|326564967|gb|EGE15168.1| thymidylate kinase [Moraxella catarrhalis 12P80B1]
 gi|326573572|gb|EGE23534.1| thymidylate kinase [Moraxella catarrhalis CO72]
          Length = 206

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 10/204 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEG EG GKTT I  L   L  +   V  TREPGG+  AE  R + L+   +   
Sbjct: 3   GKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNTN-MN 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
           A+ E ++  AAR DH+  VI PA+  GK ++ DRF DS+ AYQG  R   +   L  ++ 
Sbjct: 62  ADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIEL 121

Query: 123 ISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  Q   + PD T+ LDL V +G++R   R      +  D  E  D+   E+  Q     
Sbjct: 122 LIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAYQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
                +R H +D+  +   VA  I
Sbjct: 176 HSQHSNRIHRIDANGTVAEVAARI 199


>gi|317047712|ref|YP_004115360.1| thymidylate kinase [Pantoea sp. At-9b]
 gi|316949329|gb|ADU68804.1| thymidylate kinase [Pantoea sp. At-9b]
          Length = 211

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 11/202 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT    +   L+ +  D  V TREPGGTP AE  R VL+  G++  + 
Sbjct: 5   FIVIEGLEGAGKTTARDAVVEVLREQGIDDLVFTREPGGTPLAEQLR-VLVKQGIEGEQV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  TDKAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDTQLMTTLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PDCT+ LD+  +IGL+R + R        LD  E++ +   E+ R+ +L +A 
Sbjct: 124 AVLGAFRPDCTLYLDVTPEIGLQRARARGE------LDRIEQESLRFFERTRERYLALAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P    I D+  +   V  +I
Sbjct: 178 ADPSIITI-DATQTLPEVTASI 198


>gi|188026129|ref|ZP_02960979.2| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827]
 gi|188021733|gb|EDU59773.1| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827]
          Length = 212

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 6/164 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV--DEF 62
           +I  EG+EGAGKTT I  +   L +    D+  TREPGGTP AE  R  L+  G+  ++ 
Sbjct: 9   YIVIEGLEGAGKTTAIKTVVETLNQAGIQDIAFTREPGGTPLAEKLRE-LIKQGISGEKV 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL  GK ++ DR   SS AYQG         + SL++
Sbjct: 68  TDKAELLMLYAARVQLVENVIKPALAAGKWVVGDRHDLSSQAYQGGGRGIDRQLMQSLRD 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           + + E  P  T+ LDLP  +GL+R + R  L   E   L +FER
Sbjct: 128 LVLGEFKPALTLYLDLPPALGLQRARARGELDRIEQESLAFFER 171


>gi|239815834|ref|YP_002944744.1| thymidylate kinase [Variovorax paradoxus S110]
 gi|239802411|gb|ACS19478.1| thymidylate kinase [Variovorax paradoxus S110]
          Length = 220

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 10/156 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLF++ EGI+GAGK++H+  ++   + +   V  TREPGGTP AE  R ++L   +D
Sbjct: 1   MSEGLFLTLEGIDGAGKSSHLDAMEALFKARGRTVVRTREPGGTPLAETLRGLVLEQAMD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E+++  AAR DH+  VI PAL  G ++LCDRF D+++AYQG         L +L
Sbjct: 61  PL---TESLLVFAARRDHIVQVIEPALARGDVVLCDRFTDATFAYQGAGRDFDTQLLSTL 117

Query: 121 QE-------ISVQEVMPDCTIILDLPVDIGLKRVQN 149
           ++        + Q + P  T+  DL  +I  +R+  
Sbjct: 118 EQWVQGGRGAAGQLLQPHITLWFDLAPEIAAERLAG 153


>gi|167836304|ref|ZP_02463187.1| thymidylate kinase [Burkholderia thailandensis MSMB43]
          Length = 206

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 15/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQEKLGPAGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D    E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175
           L++L+        PD T++ D+   +   R       R +A + D FE +      + R 
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR-------RGAARMPDKFESESDAFFARTRA 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L  A+  P R  IVDS+     +   +  ++
Sbjct: 171 EYLRRAQEAPHRFVIVDSSEPIPQIRKQLEGVL 203


>gi|15604908|ref|NP_219692.1| thymidylate kinase [Chlamydia trachomatis D/UW-3/CX]
 gi|8134523|sp|O84191|KTHY_CHLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|3328593|gb|AAC67780.1| Thymidylate Kinase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748318|gb|ADI50864.1| Thymidylate kinase [Chlamydia trachomatis D-EC]
 gi|297749198|gb|ADI51876.1| Thymidylate kinase [Chlamydia trachomatis D-LC]
          Length = 203

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT  I  L + L  +  ++  TREPGG    ++ R +LL     +   
Sbjct: 1   MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
            AE ++F AAR  H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    
Sbjct: 60  YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +  +PD T +LD+P   GL R   +        LD FE+K  + H   R+ FL +A 
Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHRSVREGFLALAE 173

Query: 183 NQPDRCHIVDS 193
             PDR  ++D+
Sbjct: 174 KAPDRYKVLDA 184


>gi|296112464|ref|YP_003626402.1| thymidylate kinase [Moraxella catarrhalis RH4]
 gi|295920158|gb|ADG60509.1| thymidylate kinase [Moraxella catarrhalis RH4]
 gi|326561596|gb|EGE11935.1| thymidylate kinase [Moraxella catarrhalis 7169]
 gi|326565335|gb|EGE15514.1| thymidylate kinase [Moraxella catarrhalis 103P14B1]
 gi|326568044|gb|EGE18134.1| thymidylate kinase [Moraxella catarrhalis BC7]
 gi|326570576|gb|EGE20614.1| thymidylate kinase [Moraxella catarrhalis BC1]
 gi|326570735|gb|EGE20761.1| thymidylate kinase [Moraxella catarrhalis BC8]
 gi|326577357|gb|EGE27243.1| thymidylate kinase [Moraxella catarrhalis 101P30B1]
 gi|326577843|gb|EGE27710.1| thymidylate kinase [Moraxella catarrhalis O35E]
          Length = 206

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 10/204 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEG EG GKTT I  L   L  +   V  TREPGG+  AE  R + L+   +   
Sbjct: 3   GKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNAN-MN 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
           A+ E ++  AAR DH+  VI PA+  GK ++ DRF DS+ AYQG  R   +   L  ++ 
Sbjct: 62  ADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIEL 121

Query: 123 ISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  Q   + PD T+ LDL V +G++R   R      +  D  E  D+   E+  Q     
Sbjct: 122 LIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAYQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
                +R H +D+  +   VA  I
Sbjct: 176 HSQHSNRIHRIDANGTVAEVAARI 199


>gi|15604527|ref|NP_221045.1| thymidylate kinase [Rickettsia prowazekii str. Madrid E]
 gi|6225595|sp|Q9ZCN9|KTHY_RICPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|3861221|emb|CAA15121.1| THYMIDYLATE KINASE (tmk) [Rickettsia prowazekii]
 gi|292572315|gb|ADE30230.1| Thymidylate kinase [Rickettsia prowazekii Rp22]
          Length = 203

 Score =  108 bits (270), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 9/195 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG++G GK+T   +L  +L+ +   V +TRE GGT  AE  R +L++   +
Sbjct: 4   LTQGKFITFEGVDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTTVAEKMREILVN---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL +G I++CDRF+DS+  YQG    +    + SL
Sbjct: 61  ELLPMSELLQAMAARYDHMARKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLVYSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+     +KRV  R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPHTAIKRVNAR------NMSNKFDIRSIDFYKKIYTCFKEL 174

Query: 181 ARNQPDRCHIVDSAH 195
           +   P+R   + ++H
Sbjct: 175 SNRFPERIKTIKASH 189


>gi|322833645|ref|YP_004213672.1| thymidylate kinase [Rahnella sp. Y9602]
 gi|321168846|gb|ADW74545.1| thymidylate kinase [Rahnella sp. Y9602]
          Length = 216

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 107/202 (52%), Gaps = 11/202 (5%)

Query: 6   FISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT H  ++    Q    ++  TREPGGTP AE  R  L   GVD  + 
Sbjct: 5   FIVIEGLEGAGKTTAHDVVVNALRQHGVGEIVFTREPGGTPLAEKLRD-LFKRGVDGEKP 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VE VI PAL  G  ++ DR   SS AYQG         + SL++
Sbjct: 64  TVKAEVLMLYAARVQLVETVILPALARGAWVVGDRHDLSSQAYQGGGRGIDAKLMTSLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LDLP  IGL+R + R        LD  E++ +   E+ R  +L++A 
Sbjct: 124 TVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQEALPFFERTRTRYLELAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
               R   +D++ S + V  +I
Sbjct: 178 GD-SRIKTIDASQSIEQVTASI 198


>gi|307131529|ref|YP_003883545.1| thymidylate kinase [Dickeya dadantii 3937]
 gi|306529058|gb|ADM98988.1| thymidylate kinase [Dickeya dadantii 3937]
          Length = 217

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 96/168 (57%), Gaps = 5/168 (2%)

Query: 1   MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKT+ H  +++        D+  TREPGGTP AE  R ++     
Sbjct: 1   MNSK-FIVIEGLEGAGKTSAHAVVVETLRTFGIDDIVFTREPGGTPLAEKLRELIKQGVA 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  VENVIRPAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  DEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDEQLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           SL++  + +  PD T+ LD+P ++GLKR + R +L   E   L +FER
Sbjct: 120 SLRDTVLGDFRPDLTLYLDIPPELGLKRARQRGALDRIELESLAFFER 167


>gi|227499766|ref|ZP_03929866.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098]
 gi|227218152|gb|EEI83418.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098]
          Length = 209

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 12/215 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG +G+GKTT +S +K+ L++   +    REPGGT  +E  R +++        
Sbjct: 3   GKLIVFEGPDGSGKTTVLSEVKKRLEKDKIEFLDYREPGGTYISEKIRDIIIDKDNIAMT 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E ++FAA+R   VE  I+PAL  G ++LCDRF+ SS  YQG     + L +D ++EI
Sbjct: 63  ASCECLLFAASRAQLVEEKIKPALESGMLVLCDRFVLSSLLYQG---VGRGLGIDKVKEI 119

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   +  D TI  D+     L R       RE+   D  E +D   H+K    +LDI
Sbjct: 120 NDFATAGLRADLTIFFDIDYKTALIRK------RENFSADRLESEDFDFHKKIFNAYLDI 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A         +D++ S   V   ++ +++E ++++
Sbjct: 174 AERYKKEIKKIDASKSVTEVTDQVMKLIYESLEEK 208


>gi|253989189|ref|YP_003040545.1| thymidylate kinase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253780639|emb|CAQ83801.1| thymidylate kinase [Photorhabdus asymbiotica]
          Length = 212

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 113/219 (51%), Gaps = 14/219 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKT+ +  +   L++    D+  TREPGGTP AE  R ++     
Sbjct: 1   MNSK-FIVIEGLEGAGKTSAMKTVVELLKQHGIQDLVFTREPGGTPLAEKLRELIKQGIE 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  DEPLTDKAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDKNLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176
           SL+   +    PD TI LDLP  IGL R   R  L   E   +D+F+R         R  
Sbjct: 120 SLRNTVLGSFRPDLTIYLDLPPQIGLLRACQRGELDRIEKESMDFFDRT--------RSC 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L+ A +Q      VD++     V  +I  ++ + ++++
Sbjct: 172 YLEFA-SQDKSIVTVDASQPIDRVQADICQVLEQWLKQQ 209


>gi|116626370|ref|YP_828526.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076]
 gi|116229532|gb|ABJ88241.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076]
          Length = 224

 Score =  108 bits (269), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 1/205 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG++G+GKTT +  L   L+     V  T EPGG P A+  R ++L     E  
Sbjct: 17  GIFITFEGMDGSGKTTQMHRLAERLRGMGRTVLETAEPGGPPIAQKIRRIVLDAANQELS 76

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ A+R  +V+  I+PAL  G+I+L DRF DSS  YQG         + +L  I
Sbjct: 77  PTAEILLYFASRAQNVDQWIQPALARGEIVLADRFTDSSLVYQGIGRGLGADTVVALDRI 136

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + PD TI++D+  +  L R + R +L +  C    + + +  H K    +  +A  
Sbjct: 137 ACRGLKPDLTILVDVDAEASLTRARAR-NLAQPHCETRMDDQALEFHLKVHAAYHALAAA 195

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R  + +       +   I +IV
Sbjct: 196 EPERVKVANGRAGMDEIEREIWSIV 220


>gi|296102884|ref|YP_003613030.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057343|gb|ADF62081.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 213

 Score =  108 bits (269), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L+     D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVIETLKTLGVADMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  GK ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E   LD+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A +Q      +D+  S + V  +I   V   +Q++
Sbjct: 177 LA-SQDSSIRTIDATQSLEEVTRSIEETVKHWLQEQ 211


>gi|54308393|ref|YP_129413.1| thymidylate kinase [Photobacterium profundum SS9]
 gi|59798292|sp|Q6LSW5|KTHY_PHOPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46912821|emb|CAG19611.1| putative thymidylate kinase [Photobacterium profundum SS9]
          Length = 209

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGK+T I  ++         +   TREPGGTP AE  R ++     DE   
Sbjct: 5   FIVIEGLEGAGKSTAIQQVIDALAAHGIENPESTREPGGTPLAEQMRALIKEGHPDEPLT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR+  V+N+I+PAL EG+ ++ DR   SS AYQG         +++L++ 
Sbjct: 65  DMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + +  PD TI +D+   +GL+R + R        LD  E+ +V    + R  FL+++ N
Sbjct: 125 VLGDFCPDLTIYMDIDPILGLERARGR------GELDRIEKMNVDFFHRARARFLELSEN 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P +  I+D+  S ++V +++   +   ++K+
Sbjct: 179 NP-KVIIIDAGQSLENVTSDLKQALNHWLEKQ 209


>gi|270261351|ref|ZP_06189624.1| thymidylate kinase [Serratia odorifera 4Rx13]
 gi|270044835|gb|EFA17926.1| thymidylate kinase [Serratia odorifera 4Rx13]
          Length = 211

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 112/212 (52%), Gaps = 11/212 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63
           F+  EG+EGAGKTT    +   L+     D+  TREPGGTP AE  R  L   G+D E  
Sbjct: 5   FVVIEGLEGAGKTTARDTVVNVLREHGINDIVFTREPGGTPLAEKLRD-LFKRGIDGELP 63

Query: 64  A-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + SL++
Sbjct: 64  TIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMASLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LDLP  +GL+R + R        LD  E++ +   E+ R  +L++A 
Sbjct: 124 TVLGDFRPDLTVYLDLPPLLGLQRARAR------GELDRIEQEALPFFERTRSRYLELA- 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            Q D    VD++ S + V   I   + + +Q+
Sbjct: 177 AQDDSIVTVDASQSLEQVTAAIRRCLSQWLQQ 208


>gi|242239032|ref|YP_002987213.1| thymidylate kinase [Dickeya dadantii Ech703]
 gi|242131089|gb|ACS85391.1| thymidylate kinase [Dickeya dadantii Ech703]
          Length = 217

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 96/169 (56%), Gaps = 7/169 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKT+  +++   L      DV  TREPGGTP AE  R  L+  GV
Sbjct: 1   MNSK-FIVIEGLEGAGKTSARTVVVDGLAAFGIRDVVFTREPGGTPVAEKLRE-LIKQGV 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           D      +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         L
Sbjct: 59  DGEPLTDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDARLL 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
            SL++I + +  PD T+ LDLP  +GL+R + R  L   E   L +FER
Sbjct: 119 SSLRDIVLGDFRPDLTLYLDLPPALGLQRARQRGELDRIEQESLTFFER 167


>gi|146311269|ref|YP_001176343.1| thymidylate kinase [Enterobacter sp. 638]
 gi|166987703|sp|A4W9B2|KTHY_ENT38 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145318145|gb|ABP60292.1| thymidylate kinase [Enterobacter sp. 638]
          Length = 213

 Score =  107 bits (268), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L+    +  V TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVDTLKELGIEQMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL EG+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  IDVKAEVLMFYAARVQLVETVIKPALAEGQWVIGDRHDLSTQAYQGGGRGIDQQMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
              + +  P+ T+ LD+  ++GLKR + R  L   E   LD+F R         R  +L+
Sbjct: 125 NAVLGDFRPNLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A  Q D    +D+  S + V  +I   +   +Q++
Sbjct: 177 LA-AQDDSIRTIDATQSLEGVTRSIRETITAWLQEQ 211


>gi|323976529|gb|EGB71617.1| thymidylate kinase [Escherichia coli TW10509]
          Length = 213

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 21/217 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALTNGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211
           ++A  Q    H +D+    +SV     T + N V EL
Sbjct: 176 ELA-AQDKSIHTIDATQPLESVMDAIRTTVTNWVKEL 211


>gi|33152912|ref|NP_874265.1| thymidylate kinase [Haemophilus ducreyi 35000HP]
 gi|46576466|sp|Q7VKH4|KTHY_HAEDU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33149137|gb|AAP96654.1| thymidylate kinase [Haemophilus ducreyi 35000HP]
          Length = 214

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 12/212 (5%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGKTT H  +L +  Q     +  TREPGGTP AE  R+++     +  
Sbjct: 8   GKFIVLEGLEGAGKTTAHQIILTQLKQAGIQQIVQTREPGGTPLAEKLRYLIKHEFEEPI 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR   VENVI+PAL  GK +L DR   SS AYQG         L+SL+E
Sbjct: 68  SPQAELLMLYAARAQLVENVIKPALSAGKWVLGDRHDMSSQAYQGGGRQLDVALLNSLKE 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLDI 180
             +    PD TI LD+   IGL R         S C  LD  E++ +    + R+ +L +
Sbjct: 128 SVLGPFEPDLTIYLDIDPAIGLARA--------SGCGELDRIEQQSLDFFYRTRERYLAL 179

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            ++  ++  I+++    + V  +I   V + +
Sbjct: 180 TQHN-EKAVIINAEQPLEKVTNDIQQAVQKFL 210


>gi|188534149|ref|YP_001907946.1| thymidylate kinase [Erwinia tasmaniensis Et1/99]
 gi|238689725|sp|B2VDK3|KTHY_ERWT9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|188029191|emb|CAO97063.1| Thymidylate kinase (dTMP kinase) [Erwinia tasmaniensis Et1/99]
          Length = 210

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R  L+  GV
Sbjct: 1   MNSK-FIVIEGLEGAGKTTAREAVVSELQRHGINDIIFTREPGGTPLAEKLRE-LIKQGV 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +       AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  EGERVTDSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDAGLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +SL++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R+ +
Sbjct: 119 NSLKQAVLGDFAPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           L +A +   R   VD+    + V   +   + + +Q++
Sbjct: 173 LALA-SADSRIKTVDATRPLEQVTAALQQTLTQWLQEQ 209


>gi|323126677|gb|ADX23974.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 211

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 5/201 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  +   L +R + ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + P+ T+  D+P +IGL R+    + RE   LD    + V +H++ R+ +L 
Sbjct: 121 LNRFATDGLEPNLTLYFDVPSEIGLARIAANKN-REVNRLDL---EAVDMHQRVREGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           +A+ QP+R   +D++   + V
Sbjct: 177 LAQEQPNRIVTIDASKPLEDV 197


>gi|170679734|ref|YP_001744081.1| thymidylate kinase [Escherichia coli SMS-3-5]
 gi|218700399|ref|YP_002408028.1| thymidylate kinase [Escherichia coli IAI39]
 gi|300938665|ref|ZP_07153392.1| thymidylate kinase [Escherichia coli MS 21-1]
 gi|301023303|ref|ZP_07187098.1| thymidylate kinase [Escherichia coli MS 69-1]
 gi|226732657|sp|B7NKI2|KTHY_ECO7I RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732660|sp|B1LI47|KTHY_ECOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|170517452|gb|ACB15630.1| thymidylate kinase [Escherichia coli SMS-3-5]
 gi|218370385|emb|CAR18190.1| thymidylate kinase [Escherichia coli IAI39]
 gi|300397072|gb|EFJ80610.1| thymidylate kinase [Escherichia coli MS 69-1]
 gi|300456381|gb|EFK19874.1| thymidylate kinase [Escherichia coli MS 21-1]
          Length = 213

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 21/217 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211
           ++A  Q    H +D+    +SV     T + N V EL
Sbjct: 176 ELA-AQDKSIHTIDATQPLESVMDAIRTTVTNWVKEL 211


>gi|146295779|ref|YP_001179550.1| dTMP kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|259494264|sp|A4XHH4|KTHY_CALS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145409355|gb|ABP66359.1| thymidylate kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 206

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 8/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG +G+GK+T I  ++++L+ K Y V  TREPGGT      R +LL       
Sbjct: 2   KGKFIVFEGNDGSGKSTQILKVEKYLKEKGYKVVTTREPGGTEVGFRIRKLLLDPAYKMD 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++ AA R +HV+NV+ PAL +G +++CDR++ SS  YQG         +  L  
Sbjct: 62  GL-TEALLLAADRNEHVKNVLIPALEDGYVVVCDRYILSSIVYQGIVRGVGVENIIKLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I  +++ PD  IIL L  +I L+R      L+ +   D  + ++   H K    F ++++
Sbjct: 121 IFEEKIKPDLYIILTLSPEIALQR------LKMAGKNDKLDTENFDFHRKVYNGFKEVSK 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               +C  +++  + + V   +  ++ +L++KR
Sbjct: 175 -MFKKCVNIEAEGTVEDVFEKVRKVIDDLLKKR 206


>gi|197284751|ref|YP_002150623.1| thymidylate kinase [Proteus mirabilis HI4320]
 gi|227357756|ref|ZP_03842105.1| thymidylate kinase [Proteus mirabilis ATCC 29906]
 gi|194682238|emb|CAR41959.1| thymidylate kinase [Proteus mirabilis HI4320]
 gi|227162085|gb|EEI47099.1| thymidylate kinase [Proteus mirabilis ATCC 29906]
          Length = 214

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 6/169 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +  FI  EG+EGAGKT+ I +++    Q+   D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MKNSKFIVIEGLEGAGKTSAIQTVVDTLKQQGITDLAFTREPGGTPLAEKLRE-LIKQGI 59

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +  +   +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         +
Sbjct: 60  EGEKVTDKAELLMLYAARVQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRGIDKALM 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
            SL++  + +  PD T+ LDL   +GL R + R  L   E   +D+F R
Sbjct: 120 KSLRDTVLADFKPDLTLYLDLDPAVGLARARARGELDRIEKESMDFFYR 168


>gi|88608604|ref|YP_506430.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama]
 gi|123491811|sp|Q2GDL6|KTHY_NEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|88600773|gb|ABD46241.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama]
          Length = 199

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 3/132 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EGI+G+GK+T + LL +FL +  Y   +TREPGGT  AE+ R ++L   +D    
Sbjct: 1   MFIVLEGIDGSGKSTQVKLLSKFLAKDGYPCVLTREPGGTSFAESLRSMILHDPIDPM-- 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++  +AR+DH   VI PAL EGK+++CDRF+ S+ AYQG  D      +  L  +S
Sbjct: 59  -ARLLLIVSARVDHYNKVILPALKEGKVVVCDRFIYSTLAYQGYGDKIDLQTILDLHRLS 117

Query: 125 VQEVMPDCTIIL 136
              V PD T++L
Sbjct: 118 GCLVEPDLTLLL 129


>gi|319943555|ref|ZP_08017837.1| thymidylate kinase [Lautropia mirabilis ATCC 51599]
 gi|319743370|gb|EFV95775.1| thymidylate kinase [Lautropia mirabilis ATCC 51599]
          Length = 230

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 96/163 (58%), Gaps = 5/163 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK+TH+     +L+ +   V ++REPGG+P AE  R +LL+   +E  
Sbjct: 9   GCFITFEGIDGAGKSTHVGACVDWLRAQGETVVLSREPGGSPLAERLRELLLT---EEMQ 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + EA++  AAR DH+  +IRPAL  G+ ++CDRF DS++AYQG        +L  L+  
Sbjct: 66  PQTEALLAFAARSDHLHTLIRPALAAGQWVVCDRFTDSTFAYQGGGSDVDTTWLAQLEAQ 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
               + P  T + DLP ++   R     S    E+  LDYFER
Sbjct: 126 VQDGLQPVRTYLFDLPPEVAAARRAAVRSADRFEARALDYFER 168


>gi|116747846|ref|YP_844533.1| dTMP kinase [Syntrophobacter fumaroxidans MPOB]
 gi|116696910|gb|ABK16098.1| thymidylate kinase [Syntrophobacter fumaroxidans MPOB]
          Length = 222

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           S  F++FEGI+G GK+T I  L  +L R       TREPGGT   E  R +LL       
Sbjct: 15  SPKFVTFEGIDGCGKSTLIDELASWLDRTRVPYVKTREPGGTSLGEKIRGLLLDPAHRGM 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E +++ A+R   V  +I PAL  G  +L DR++D++ AYQG         L  LQ 
Sbjct: 75  NRQTEVLLYTASRAQLVAEIILPALKSGAWVLADRYIDATLAYQGYGRELDPDPLRRLQH 134

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + Q ++PD T++LD  +D    R+  R     +   D  E ++   HE+ +  +LD+A 
Sbjct: 135 WATQALVPDKTVLLDCGIDTAAARMSAR-----NHRPDRIEMEERAFHERVKAGYLDLAS 189

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++D+      V  +      E+V
Sbjct: 190 LDPGRFIVLDAEKPLPEVIADFRAAFREIV 219


>gi|260893950|ref|YP_003240047.1| thymidylate kinase [Ammonifex degensii KC4]
 gi|260866091|gb|ACX53197.1| thymidylate kinase [Ammonifex degensii KC4]
          Length = 202

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 118/221 (53%), Gaps = 25/221 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EGI+G GKTT   +L + L+ +  +V   REPGGT   EA R +L     +E  
Sbjct: 3   GFFIVLEGIDGVGKTTQARILAQKLREQGREVVEVREPGGTRLGEAIRELLQK---EELA 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA +F A+R   VE VI+PAL +GK+++ DRF  S+ AYQG    +  L  D L ++
Sbjct: 60  PWAEACLFLASRAQLVEEVIKPALAKGKVVVGDRFSLSTLAYQG----ALGLEPDKLAQL 115

Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +      + PD T+++DL  +  L R   +  LRE        +K  ++ E+    +L++
Sbjct: 116 NSWVTGGLEPDLTLVIDLKAEEALAR--GKGDLREE-----IRQKLEIVRER----YLNL 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           A+ +  +  +VD   S + V+  I    W LV++ ++  SS
Sbjct: 165 AKERAAKVLVVDGQGSVEEVSRRI----WALVEEALARWSS 201


>gi|90413263|ref|ZP_01221257.1| putative thymidylate kinase [Photobacterium profundum 3TCK]
 gi|90325664|gb|EAS42127.1| putative thymidylate kinase [Photobacterium profundum 3TCK]
          Length = 209

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGK+T I  ++         +   TREPGGTP AE  R ++     DE   
Sbjct: 5   FIVIEGLEGAGKSTAIQQVIDTLAAHGIENPESTREPGGTPLAEQMRALIKDGHPDEPLT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR+  V+N+I+PAL EG+ ++ DR   SS AYQG         +++L++ 
Sbjct: 65  DMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + +  PD TI +D+   +GL+R + R        LD  E+ +V    + R  FL+++ N
Sbjct: 125 VLGDFCPDLTIYMDIDPILGLERARGRGE------LDRIEKMNVDFFHRARARFLELSEN 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P +  I+D++ S + V +++   +   ++K+
Sbjct: 179 NP-KVIIIDASQSLECVTSDLKQALNHWLEKQ 209


>gi|297579520|ref|ZP_06941448.1| thymidylate kinase [Vibrio cholerae RC385]
 gi|297537114|gb|EFH75947.1| thymidylate kinase [Vibrio cholerae RC385]
          Length = 212

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++   LQ+   D +  TREPGGT  AE  R ++      +E  
Sbjct: 5   FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + SL++ 
Sbjct: 65  DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD T+ LD+   +GL+R + R        LD  E+  +   E+ R+ +L++A N
Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMGISFFERARERYLELA-N 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   ++D+A S + V  +I
Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198


>gi|323491965|ref|ZP_08097134.1| thymidylate kinase [Vibrio brasiliensis LMG 20546]
 gi|323313823|gb|EGA66918.1| thymidylate kinase [Vibrio brasiliensis LMG 20546]
          Length = 209

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 9/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVL-LSCG 58
           M +  FI  EG+EGAGK+T I+ +   L++   + +  TREPGGT  AE  R ++     
Sbjct: 1   MKNAKFIVIEGLEGAGKSTAINAVLETLKQAGVERIQHTREPGGTALAEKLRTLVKQEHE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL +G+ ++ DR   SS AYQG         + 
Sbjct: 61  GEELQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIPRETML 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD TI LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 ALKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           +IA NQ D   ++++      VA +I
Sbjct: 175 EIA-NQDDSVIVINAEQEIPQVAADI 199


>gi|26247240|ref|NP_753280.1| thymidylate kinase [Escherichia coli CFT073]
 gi|227886546|ref|ZP_04004351.1| thymidylate kinase [Escherichia coli 83972]
 gi|300974436|ref|ZP_07172613.1| thymidylate kinase [Escherichia coli MS 45-1]
 gi|301051116|ref|ZP_07197949.1| thymidylate kinase [Escherichia coli MS 185-1]
 gi|31563157|sp|Q8FIN9|KTHY_ECOL6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|26107641|gb|AAN79840.1|AE016759_114 Thymidylate kinase [Escherichia coli CFT073]
 gi|227836750|gb|EEJ47216.1| thymidylate kinase [Escherichia coli 83972]
 gi|300297242|gb|EFJ53627.1| thymidylate kinase [Escherichia coli MS 185-1]
 gi|300410570|gb|EFJ94108.1| thymidylate kinase [Escherichia coli MS 45-1]
 gi|307553099|gb|ADN45874.1| thymidylate kinase [Escherichia coli ABU 83972]
 gi|315291041|gb|EFU50404.1| thymidylate kinase [Escherichia coli MS 153-1]
          Length = 213

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 21/217 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  +  V PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGGVRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211
           ++A  Q    H +D+    ++V     T + N V EL
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTNWVKEL 211


>gi|315612950|ref|ZP_07887861.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296]
 gi|315315060|gb|EFU63101.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296]
          Length = 212

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    S RE   LD    + + +H+K R+ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDM---EGLDLHKKVRKGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
              + +R   +D++   + V
Sbjct: 177 LDKEGNRMVKIDASLPLEQV 196


>gi|239948423|ref|ZP_04700176.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239922699|gb|EER22723.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 203

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTLVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            +  +  +MPD T  +D+  D  +KRV +R
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR 150


>gi|293364068|ref|ZP_06610804.1| dTMP kinase [Mycoplasma alligatoris A21JP2]
 gi|292552558|gb|EFF41332.1| dTMP kinase [Mycoplasma alligatoris A21JP2]
          Length = 216

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 13/202 (6%)

Query: 5   LFISFEGIEGAGKTTHI-SLLKRFLQR-KNYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60
           +FI+FEG++G+GKTT I   L+  L++  N    +TREPGG    EA   R ++L     
Sbjct: 1   MFITFEGLDGSGKTTIIEKFLENILEKFPNLKYVLTREPGGKDIVEAEKIREIILDKK-S 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  +  EA++++A+R  H+E+VI PAL    ++LCDR++DS YAYQG   S    +++ L
Sbjct: 60  QLSSVTEALLYSASRRIHLESVIWPALENNHLVLCDRYVDSFYAYQGYARSLGVEYVEEL 119

Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            ++ + + MPD TI  D+ P D   +R+ NR         D  + +    H K    +L 
Sbjct: 120 TKLVIDKTMPDITIFFDINPADSKKRRLANR------LVHDRMDDETEAFHNKVYGGYLK 173

Query: 180 -IARNQPDRCHIVDSAHSFQSV 200
            I + + DR  IVD++ S   V
Sbjct: 174 IIEKEKSDRFIIVDASKSIDEV 195


>gi|166154398|ref|YP_001654516.1| thymidylate kinase [Chlamydia trachomatis 434/Bu]
 gi|166155273|ref|YP_001653528.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335657|ref|ZP_07223901.1| thymidylate kinase [Chlamydia trachomatis L2tet1]
 gi|238687405|sp|B0B9T8|KTHY_CHLT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687461|sp|B0BBG8|KTHY_CHLTB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|165930386|emb|CAP03879.1| thymidylate kinase [Chlamydia trachomatis 434/Bu]
 gi|165931261|emb|CAP06833.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 203

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT  I  L + L  +  ++  TREPGG    ++ R +LL     +   
Sbjct: 1   MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
            AE ++F AAR  H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    
Sbjct: 60  YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +  +PD   +LD+P   GL R   +        LD FE+K  + H+  R+ FL +A 
Sbjct: 120 VGDKPFLPDIIFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173

Query: 183 NQPDRCHIVDS 193
             PDR  ++D+
Sbjct: 174 KAPDRYKVLDA 184


>gi|120598611|ref|YP_963185.1| thymidylate kinase [Shewanella sp. W3-18-1]
 gi|146293310|ref|YP_001183734.1| thymidylate kinase [Shewanella putrefaciens CN-32]
 gi|120558704|gb|ABM24631.1| thymidylate kinase [Shewanella sp. W3-18-1]
 gi|145565000|gb|ABP75935.1| thymidylate kinase [Shewanella putrefaciens CN-32]
 gi|319426610|gb|ADV54684.1| thymidylate kinase [Shewanella putrefaciens 200]
          Length = 208

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 115/205 (56%), Gaps = 10/205 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63
           FI  EG+EGAGK++ I+L++ F+++      + TREPGGTP AE  R ++ ++   D   
Sbjct: 7   FIVIEGLEGAGKSSAITLIRDFIEKHTGRAPICTREPGGTPLAERIRDLVKIADPSDPLC 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E+E ++  AAR   V NVI+PAL +G+ +L DR   SS AYQG       L ++++   
Sbjct: 67  DESECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMPL-VEAVSAA 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +++   PD T+ LDL   +GL R   R        LD  E++ +   E+ R  +L +A +
Sbjct: 126 TLKGFKPDLTLYLDLDPKLGLTRAAKRGE------LDRIEQQTIDFFERARATYLKLA-S 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           + D   ++D++ +   V  +IL ++
Sbjct: 179 EDDSIVVIDASQTMAEVHKDILAVL 203


>gi|261209807|ref|ZP_05924109.1| thymidylate kinase [Vibrio sp. RC341]
 gi|260841105|gb|EEX67625.1| thymidylate kinase [Vibrio sp. RC341]
          Length = 212

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 16/209 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   L +   + +  TREPGGT  AE  R ++     
Sbjct: 1   MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTVLAEKLRTLVKE--- 56

Query: 60  DEFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           D  G E     E ++  AAR+  VENVI+PAL +G+ ++ DR   SS AYQG        
Sbjct: 57  DHPGEELKDITELLLVYAARVQLVENVIKPALAKGQWVVGDRHDMSSQAYQGGGRQIAPS 116

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + SL++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ
Sbjct: 117 TMLSLKQTALGNFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQ 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            +L++A  + D   ++++A S + VAT+I
Sbjct: 171 RYLELA-EEDDSVVLINAAQSVEQVATDI 198


>gi|56478513|ref|YP_160102.1| thymidylate kinase [Aromatoleum aromaticum EbN1]
 gi|56314556|emb|CAI09201.1| Thymidylate kinase [Aromatoleum aromaticum EbN1]
          Length = 210

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 14/208 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEGI+GAGK++ I+ +   L+ +   V  TREPGGT   E  R +LL    +    E
Sbjct: 10  FITFEGIDGAGKSSQIAAVVALLEARGLCVEQTREPGGTALGERLRELLLH---EPMHLE 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GER--DSSQHLFLDSLQE 122
            EA++  AAR +H+   I PAL  G+ ++ DRF D++YAYQ G R  D ++   L++   
Sbjct: 67  TEALLMFAARREHLAARILPALAAGRWVVSDRFSDATYAYQVGGRGLDPAKFAALEAWVH 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              Q   PD T++ DLP ++   R+      +  A  D FER+     E+ R  +L+ AR
Sbjct: 127 PGFQ---PDLTLVFDLPPEVAAARLA-----KGGAEPDRFEREQRDFFERVRAAYLERAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P R  I+D+  + +S+   +  IV E
Sbjct: 179 MAPGRIRIIDAGGTAESIRAEVEAIVEE 206


>gi|258540440|ref|YP_003174939.1| thymidylate kinase [Lactobacillus rhamnosus Lc 705]
 gi|257152116|emb|CAR91088.1| Thymidylate kinase [Lactobacillus rhamnosus Lc 705]
          Length = 181

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 3/176 (1%)

Query: 35  VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
           +H+TREPGG   +E  R V+L        A  EA+++AA+R  H+  VI+PAL  G I++
Sbjct: 1   MHLTREPGGAKISEMIRDVILDPKNTAMDARTEALLYAASRRQHLVEVIQPALAHGDIVV 60

Query: 95  CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           CDRF+DSS AYQG         +  + + +   + PD T+ LD+PV +GL R+      R
Sbjct: 61  CDRFVDSSVAYQGGGRQIGTQAVLQMNQFATAGLEPDLTVYLDVPVQVGLDRIMAHQGER 120

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +    D  +++ +  HE+    ++ +  + P R   VD+     +V T     + E
Sbjct: 121 Q---YDRLDQESLAFHERVHAAYMKLVADNPKRIVTVDATQPLAAVVTAAFMTITE 173


>gi|24374155|ref|NP_718198.1| thymidylate kinase [Shewanella oneidensis MR-1]
 gi|46576581|sp|Q8EDX8|KTHY_SHEON RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|24348659|gb|AAN55642.1|AE015703_4 thymidylate kinase [Shewanella oneidensis MR-1]
          Length = 209

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 16/211 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVD 60
           S  FI  EG+EGAGK++ I+L++ F+++      V TREPGGTP AE  R ++ ++   D
Sbjct: 5   SAKFIVVEGLEGAGKSSAIALIRDFIEKHTGHAPVCTREPGGTPLAERIRDLVKIADPSD 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E+E ++  AAR   V NVI+PAL +G  +L DR   SS AYQG       L ++++
Sbjct: 65  PLCDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRGLMPL-VEAV 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
              +++   PD T+ LDL   +GL+R   R  L   E   +D+FER         R  +L
Sbjct: 124 SNATLKGFKPDLTLYLDLDPKLGLQRAAKRGELDRIEQQAIDFFERA--------RATYL 175

Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIV 208
            +A    D C +V D++ +   V  +IL ++
Sbjct: 176 KLASE--DECIVVIDASQTMAEVHKDILAVL 204


>gi|283784887|ref|YP_003364752.1| Thymidylate kinase [Citrobacter rodentium ICC168]
 gi|282948341|emb|CBG87926.1| Thymidylate kinase [Citrobacter rodentium ICC168]
          Length = 213

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   LQ+    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLQQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VIRPAL  G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ICDKAEVLMFYAARVQLVETVIRPALANGAWVIGDRHDLSTQAYQGGGRGIDRHMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A   P     +D+     +V  +I  +V E V+++
Sbjct: 177 LAAQDPG-IRTIDATQPLDAVMHSIRTVVSEWVKEQ 211


>gi|6729847|pdb|4TMK|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate
           Inhibitor Tp5a
 gi|6729850|pdb|5TMP|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate
           Inhibitor Aztp5a
          Length = 213

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R +LL   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A  Q    H +D+    ++V   I   V   V++
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|15618193|ref|NP_224478.1| thymidylate kinase [Chlamydophila pneumoniae CWL029]
 gi|15835808|ref|NP_300332.1| thymidylate kinase [Chlamydophila pneumoniae J138]
 gi|16752765|ref|NP_445033.1| thymidylate kinase [Chlamydophila pneumoniae AR39]
 gi|33241615|ref|NP_876556.1| thymidylate kinase [Chlamydophila pneumoniae TW-183]
 gi|8134529|sp|Q9Z8R5|KTHY_CHLPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|4376546|gb|AAD18422.1| Thymidylate Kinase [Chlamydophila pneumoniae CWL029]
 gi|7189404|gb|AAF38316.1| thymidylate kinase [Chlamydophila pneumoniae AR39]
 gi|8978647|dbj|BAA98483.1| thymidylate kinase [Chlamydophila pneumoniae J138]
 gi|33236124|gb|AAP98213.1| dTMP kinase [Chlamydophila pneumoniae TW-183]
 gi|269303148|gb|ACZ33248.1| thymidylate kinase [Chlamydophila pneumoniae LPCoLN]
          Length = 206

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++    L   L  ++  V +TREPGG    E  R ++L     E   
Sbjct: 1   MFIVIEGGEGSGKSSLAKALGDQLVAQDRKVLLTREPGGCLIGERLRDLILEPPHLELSR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
             E  +F  +R  H++ VI PAL +G I++C+RF DS+  YQG  +     F+  L  + 
Sbjct: 61  CCELFLFLGSRAQHIQEVIIPALRDGYIVICERFHDSTIVYQGIAEGLGADFVADLCSKV 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +     +P+  ++LD+P DIGL+R   +         D FE+K +  H + R+ FL +A 
Sbjct: 121 VGPTPFLPNFVLLLDIPADIGLQRKHRQ------KVFDKFEKKPLSYHNRIREGFLSLAS 174

Query: 183 NQPDRCHIVDSAHSFQSVATNIL 205
             P R  ++D+  S  S+   ++
Sbjct: 175 ADPSRYLVLDARESLASLIDKVM 197


>gi|85713264|ref|ZP_01044288.1| Thymidylate kinase [Idiomarina baltica OS145]
 gi|85692908|gb|EAQ30882.1| Thymidylate kinase [Idiomarina baltica OS145]
          Length = 205

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F+  EG+EGAGK++ ++ +   LQ K       REPGGTP AEA R ++     ++  
Sbjct: 3   GKFVVIEGLEGAGKSSAMASVVSHLQAKGIRTETVREPGGTPMAEAIRSLVKQRWEEQVQ 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  A+R+  V+ VI PAL +G  ++ DR   SS AYQG         L+ L++I
Sbjct: 63  PATELLLMYASRVQLVKTVIEPALEQGAWVIGDRHDLSSQAYQGGGRELGAELLEKLKDI 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++   +PD T+ LD+  + GL+R + R        LD  E +D+    + R  +L++A+ 
Sbjct: 123 ALGSFVPDLTLYLDVDEETGLQRARGR------GELDRIEEEDIEFFRRTRTRYLELAKR 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
            P+   I+++     +V   IL  + E
Sbjct: 177 DPN-IVIINANQEMLNVHQAILRALEE 202


>gi|261339399|ref|ZP_05967257.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316]
 gi|288318200|gb|EFC57138.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316]
          Length = 213

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L      D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVDTLNTLGVADIVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +GK ++ DR   S+ AYQG         L +L+
Sbjct: 65  INDKAEVLMFYAARVQLVETVIKPALADGKWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A  Q      +D+  S   V   I   V   +Q++
Sbjct: 177 LA-GQDKTIRTIDATQSLDDVTRAIQQTVTTWLQEQ 211


>gi|218689050|ref|YP_002397262.1| thymidylate kinase [Escherichia coli ED1a]
 gi|254808292|sp|B7MTM8|KTHY_ECO81 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218426614|emb|CAR07442.1| thymidylate kinase [Escherichia coli ED1a]
          Length = 213

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 21/217 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211
           ++A  Q    H +D+    ++V     T + N V EL
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMGAIRTTVTNWVKEL 211


>gi|110641274|ref|YP_669004.1| thymidylate kinase [Escherichia coli 536]
 gi|191174621|ref|ZP_03036109.1| thymidylate kinase [Escherichia coli F11]
 gi|215486309|ref|YP_002328740.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69]
 gi|218704509|ref|YP_002412028.1| thymidylate kinase [Escherichia coli UMN026]
 gi|293404386|ref|ZP_06648380.1| tmk [Escherichia coli FVEC1412]
 gi|293409463|ref|ZP_06653039.1| thymidylate kinase [Escherichia coli B354]
 gi|298380163|ref|ZP_06989768.1| dTMP kinase [Escherichia coli FVEC1302]
 gi|300896858|ref|ZP_07115350.1| thymidylate kinase [Escherichia coli MS 198-1]
 gi|300982521|ref|ZP_07176171.1| thymidylate kinase [Escherichia coli MS 200-1]
 gi|306814053|ref|ZP_07448226.1| thymidylate kinase [Escherichia coli NC101]
 gi|312968825|ref|ZP_07783032.1| thymidylate kinase [Escherichia coli 2362-75]
 gi|331646355|ref|ZP_08347458.1| dTMP kinase [Escherichia coli M605]
 gi|331662506|ref|ZP_08363429.1| dTMP kinase [Escherichia coli TA143]
 gi|331682603|ref|ZP_08383222.1| dTMP kinase [Escherichia coli H299]
 gi|122958415|sp|Q0TIX6|KTHY_ECOL5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732659|sp|B7NAX6|KTHY_ECOLU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808290|sp|B7UPB4|KTHY_ECO27 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110342866|gb|ABG69103.1| thymidylate kinase [Escherichia coli 536]
 gi|190905100|gb|EDV64751.1| thymidylate kinase [Escherichia coli F11]
 gi|215264381|emb|CAS08738.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69]
 gi|218431606|emb|CAR12485.1| thymidylate kinase [Escherichia coli UMN026]
 gi|222032851|emb|CAP75590.1| Thymidylate kinase [Escherichia coli LF82]
 gi|281178207|dbj|BAI54537.1| thymidylate kinase [Escherichia coli SE15]
 gi|284920923|emb|CBG33986.1| Thymidylate kinase [Escherichia coli 042]
 gi|291428972|gb|EFF01997.1| tmk [Escherichia coli FVEC1412]
 gi|291469931|gb|EFF12415.1| thymidylate kinase [Escherichia coli B354]
 gi|298279861|gb|EFI21369.1| dTMP kinase [Escherichia coli FVEC1302]
 gi|300307167|gb|EFJ61687.1| thymidylate kinase [Escherichia coli MS 200-1]
 gi|300359303|gb|EFJ75173.1| thymidylate kinase [Escherichia coli MS 198-1]
 gi|305852690|gb|EFM53138.1| thymidylate kinase [Escherichia coli NC101]
 gi|312286227|gb|EFR14140.1| thymidylate kinase [Escherichia coli 2362-75]
 gi|312945660|gb|ADR26487.1| thymidylate kinase [Escherichia coli O83:H1 str. NRG 857C]
 gi|320197575|gb|EFW72188.1| Thymidylate kinase [Escherichia coli WV_060327]
 gi|323190518|gb|EFZ75791.1| thymidylate kinase [Escherichia coli RN587/1]
 gi|324013268|gb|EGB82487.1| thymidylate kinase [Escherichia coli MS 60-1]
 gi|330910913|gb|EGH39423.1| thymidylate kinase [Escherichia coli AA86]
 gi|331045107|gb|EGI17234.1| dTMP kinase [Escherichia coli M605]
 gi|331060928|gb|EGI32892.1| dTMP kinase [Escherichia coli TA143]
 gi|331080234|gb|EGI51413.1| dTMP kinase [Escherichia coli H299]
          Length = 213

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 21/217 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211
           ++A  Q    H +D+    ++V     T + N V EL
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTNWVKEL 211


>gi|304397225|ref|ZP_07379104.1| thymidylate kinase [Pantoea sp. aB]
 gi|304355374|gb|EFM19742.1| thymidylate kinase [Pantoea sp. aB]
          Length = 210

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT   +++     R   D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDAIVATLRARGINDLVFTREPGGTPLAEQLR-TLVKQGI 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +  +   +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  EGEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSELM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +L++  + +  PD T+ LD+  DIGL+R + R        LD  E++ +   E+ R  +
Sbjct: 119 QTLRDAVLGDFRPDLTLYLDVTPDIGLQRARAR------GELDRIEQESLRFFERTRARY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L +A + P     +D+  S + V  ++
Sbjct: 173 LTLAADDPT-ILTIDATQSLEEVTASL 198


>gi|166221829|sp|Q4A8A6|KTHY_MYCH7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|144575350|gb|AAZ53633.2| thymidylate kinase [Mycoplasma hyopneumoniae 7448]
          Length = 211

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 11/169 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    D+  T EPGG    EA   R  LLS   +
Sbjct: 1   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLSKN-N 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 60  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119

Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164
             +  +   PD TI LD+ +      +G+ R  NR  L E+  ++++ER
Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERMGIFRDHNRDRL-ENKGVEFYER 167


>gi|229514876|ref|ZP_04404337.1| thymidylate kinase [Vibrio cholerae TMA 21]
 gi|229348856|gb|EEO13814.1| thymidylate kinase [Vibrio cholerae TMA 21]
          Length = 212

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++   L++   D +  TREPGGT  AE  R ++      +E  
Sbjct: 5   FIVIEGLEGAGKSTAIQVVVETLKQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + SL++ 
Sbjct: 65  DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L++  N
Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELT-N 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   ++D+A S + V  +I
Sbjct: 178 SDDSVVMIDAAQSIEQVTAHI 198


>gi|157146204|ref|YP_001453523.1| thymidylate kinase [Citrobacter koseri ATCC BAA-895]
 gi|166221737|sp|A8AHX4|KTHY_CITK8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157083409|gb|ABV13087.1| hypothetical protein CKO_01960 [Citrobacter koseri ATCC BAA-895]
          Length = 213

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++   +D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKSVGDET 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E   LD+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A +       +D+    ++V  +I   V   ++++
Sbjct: 177 LAASDAS-IRTIDATQPLEAVMNDIRTTVTAWIKEQ 211


>gi|271500137|ref|YP_003333162.1| thymidylate kinase [Dickeya dadantii Ech586]
 gi|270343692|gb|ACZ76457.1| thymidylate kinase [Dickeya dadantii Ech586]
          Length = 214

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 12/220 (5%)

Query: 1   MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKT+ H  +++   +    D+  TREPGGTP AE  R  L+  GV
Sbjct: 1   MNSK-FIVIEGLEGAGKTSAHAVVVETLREFGIDDIVFTREPGGTPLAEKLR-TLIKQGV 58

Query: 60  DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            E     +AE ++  AAR+  VENVIRPAL  G  ++ DR   SS AYQG         +
Sbjct: 59  AEEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGMDPQLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L++  +    PD T+ LD+P ++GLKR + R        LD  E++ +   E+ R  +
Sbjct: 119 ALLRDTVLGTFRPDLTLYLDIPPELGLKRARQR------GELDRIEQESLAFFERTRARY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             +A    +    VD++   + V  +I  ++ + +Q+ + 
Sbjct: 173 QQLA-AADNSIVTVDASRGLEQVNADIRRVLRDWLQQLIG 211


>gi|72080598|ref|YP_287656.1| thymidylate kinase [Mycoplasma hyopneumoniae 7448]
          Length = 213

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 11/169 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    D+  T EPGG    EA   R  LLS   +
Sbjct: 3   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLSKN-N 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 62  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 121

Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164
             +  +   PD TI LD+ +      +G+ R  NR  L E+  ++++ER
Sbjct: 122 NSLISENTFPDLTIFLDIKISKSFERMGIFRDHNRDRL-ENKGVEFYER 169


>gi|147669348|ref|YP_001214166.1| thymidylate kinase [Dehalococcoides sp. BAV1]
 gi|189028832|sp|A5FR84|KTHY_DEHSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146270296|gb|ABQ17288.1| thymidylate kinase [Dehalococcoides sp. BAV1]
          Length = 208

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++K     +T EPGG+ + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKKGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121
             E ++F A+R   ++NVI+PAL +GKI++CDR+ DS+ AYQG     + L LD+++   
Sbjct: 63  LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQG---YGRGLDLDTVKCVN 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++   ++PD TI LD+     L R       +     D FE ++   H++ R  F  I 
Sbjct: 120 SLASGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIY 172

Query: 182 RNQPDRCHIVDSA 194
             +PDR   +D++
Sbjct: 173 ATEPDRFLKLDAS 185


>gi|32490843|ref|NP_871097.1| hypothetical protein WGLp094 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340185|sp|Q8D3A7|KTHY_WIGBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|25166049|dbj|BAC24240.1| tmk [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 234

 Score =  105 bits (263), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 122/230 (53%), Gaps = 20/230 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63
           FI  EG+EG+GKT  IS +   L ++   +V  TREPGGTP AE+ R ++    G ++  
Sbjct: 6   FIVIEGLEGSGKTNAISKIVNLLNKQGIKNVIFTREPGGTPLAESLRTLIKEGVGYEKIT 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR+  VE+VI+PAL  G  ++ DR   SS AYQG         L  L+E+
Sbjct: 66  DNAELLMIYAARIQLVESVIKPALENGSWVVGDRHDLSSLAYQGGGRKIDTKILKMLREV 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-----------------SACLDYFERKD 166
            +++  PD T  LD+P  +GL R++ R ++R                     LD  E + 
Sbjct: 126 FLRDFYPDLTFYLDIPPIMGLARIRARATVRAQIRDKVNKIKRNHSHDIKNALDRIEVEP 185

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +   ++ R+ + ++A ++ ++   +D++ S + V   I + + + ++K++
Sbjct: 186 ISFFDRTRKKYKELA-SKNEKIITIDASKSLELVNKEIKHQLLKWLKKQI 234


>gi|206579513|ref|YP_002239283.1| thymidylate kinase [Klebsiella pneumoniae 342]
 gi|288936138|ref|YP_003440197.1| thymidylate kinase [Klebsiella variicola At-22]
 gi|290510808|ref|ZP_06550178.1| thymidylate kinase [Klebsiella sp. 1_1_55]
 gi|238057701|sp|B5XXH2|KTHY_KLEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|206568571|gb|ACI10347.1| thymidylate kinase [Klebsiella pneumoniae 342]
 gi|288890847|gb|ADC59165.1| thymidylate kinase [Klebsiella variicola At-22]
 gi|289777524|gb|EFD85522.1| thymidylate kinase [Klebsiella sp. 1_1_55]
          Length = 213

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   L+   LQ    +D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTVLAEKLRSLVLDIQSTGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  P+ T+ LD+  ++GL+R + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
              P     VD+     +VA +I
Sbjct: 179 AADPS-IRTVDATQPLDAVARDI 200


>gi|289523214|ref|ZP_06440068.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503757|gb|EFD24921.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 209

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 18/209 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           GLFI+FEGI+G+GK+TH   L   L     N  V +TREPGG       R +LL      
Sbjct: 3   GLFITFEGIDGSGKSTHAKRLYEHLSNIFGNERVLITREPGGWSGGSQLRDILLHSNWRP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   +E  +F A R +HVE  I+PAL +G+I++C+R+ DS+ AYQG     + L L+ ++
Sbjct: 63  W---SEFFLFMADRCEHVEEQIKPALAKGQIVICERYTDSTLAYQG---WGKGLPLEEME 116

Query: 122 EIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +   +   +PD TI LD+ VD  +KR++ R      +  D  E +  +   +R   + +
Sbjct: 117 RLFSLLDFPLPDLTIWLDISVDTAMKRIKAR------SASDRLEEERFLAVVRRG--YEE 168

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +++  P R   V S    + V   I  +V
Sbjct: 169 LSKRNPVRIRRVFSGDEEEKVFEEIARVV 197


>gi|156934415|ref|YP_001438331.1| thymidylate kinase [Cronobacter sakazakii ATCC BAA-894]
 gi|166221741|sp|A7MFR1|KTHY_ENTS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|156532669|gb|ABU77495.1| hypothetical protein ESA_02246 [Cronobacter sakazakii ATCC BAA-894]
          Length = 212

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 15/219 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCG 58
           S  +I  EG+EGAGKTT  +L+   L+     D+  TREPGGT  AE  R ++L   S G
Sbjct: 2   SSKYIVIEGLEGAGKTTARNLVVETLKSLGVTDMTFTREPGGTVLAEKLRSLVLDIKSVG 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L 
Sbjct: 62  DEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRQLLA 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176
           +L++  + +  PD T+ LD+   IGL+R + R  L   E   LD+F R         R  
Sbjct: 122 TLRQAVLGDFAPDLTLYLDVDPRIGLERARARGELDRIEQESLDFFNRT--------RAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L++A   P R   +D+    ++V+ +I   V   VQ++
Sbjct: 174 YLELAAADP-RIITIDACQPLEAVSHDIRATVTRWVQEQ 211


>gi|262043203|ref|ZP_06016339.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259039481|gb|EEW40616.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 213

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   L+   LQ    +D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARQLVVETLQSAGIHDLVFTREPGGTILAEKLRSLVLDIQSTGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  P+ T+ LD+  ++GL+R + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
              P     VD+     +VA +I
Sbjct: 179 AADPS-IRTVDATQPLDAVARDI 200


>gi|152969650|ref|YP_001334759.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238894132|ref|YP_002918866.1| thymidylate kinase [Klebsiella pneumoniae NTUH-K2044]
 gi|329999483|ref|ZP_08303437.1| dTMP kinase [Klebsiella sp. MS 92-3]
 gi|166221748|sp|A6T7F8|KTHY_KLEP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150954499|gb|ABR76529.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238546448|dbj|BAH62799.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|328538309|gb|EGF64448.1| dTMP kinase [Klebsiella sp. MS 92-3]
          Length = 213

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   L+   LQ    +D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTILAEKLRSLVLDIQSTGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  P+ T+ LD+  ++GL+R + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
              P     VD+     +VA +I
Sbjct: 179 AADPS-IRTVDATQPLDAVARDI 200


>gi|288818972|ref|YP_003433320.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
 gi|288788372|dbj|BAI70119.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
 gi|308752557|gb|ADO46040.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
          Length = 199

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 14/206 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EGI+G+GKTT  +LL  +L+ K +   + R+PG TP AE  R +++S  +D   
Sbjct: 3   GFLITLEGIDGSGKTTQANLLYEYLRSKGHKASLYRDPGSTPLAEKIRELIMSFSLDPI- 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++F  AR   V   I P L +G +++ DRF+DS+ AYQG         ++ L  I
Sbjct: 62  --TELLLFETARSSLVWEKILPDLQKGNVVIVDRFIDSTVAYQGYGREINLGTVNVLNHI 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +   PD T IL +P+++ L R+    +         FE KD +   K R  +  I  +
Sbjct: 120 ATRGRKPDLTFILHVPLEVALSRIGKDKT--------KFEDKDFL--RKVRDAYFLIQSS 169

Query: 184 QPDR-CHIVDSAHSFQSVATNILNIV 208
           + +R  +++D+    + V   I+ IV
Sbjct: 170 EKERQIYLIDANREKEEVFKEIVKIV 195


>gi|291282118|ref|YP_003498936.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|209773158|gb|ACI84891.1| thymidylate kinase [Escherichia coli]
 gi|209773164|gb|ACI84894.1| thymidylate kinase [Escherichia coli]
 gi|290761991|gb|ADD55952.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|320637549|gb|EFX07349.1| thymidylate kinase [Escherichia coli O157:H7 str. G5101]
 gi|320643110|gb|EFX12311.1| thymidylate kinase [Escherichia coli O157:H- str. 493-89]
 gi|320648568|gb|EFX17223.1| thymidylate kinase [Escherichia coli O157:H- str. H 2687]
 gi|320653882|gb|EFX21956.1| thymidylate kinase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320659362|gb|EFX26931.1| thymidylate kinase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664497|gb|EFX31648.1| thymidylate kinase [Escherichia coli O157:H7 str. LSU-61]
          Length = 213

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A  Q    H +D+    ++V   I   V   V++
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTRWVKE 210


>gi|312877610|ref|ZP_07737568.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795620|gb|EFR11991.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 207

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 8/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 61  MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D+  H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIKI------AGKTDRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           ++   +RC  +++  S + V   +L
Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197


>gi|313678822|ref|YP_004056562.1| dTMP kinase [Mycoplasma bovis PG45]
 gi|312950663|gb|ADR25258.1| dTMP kinase [Mycoplasma bovis PG45]
          Length = 215

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 5   LFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT +  L  K   Q+ N    VTREPGG     +E  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTIVQKLVDKLLEQKPNLSFIVTREPGGKNVRESEKIRELILDKE-S 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++ A+R  H+E VI PAL E K++LCDR++DS YAYQG        F   L
Sbjct: 60  HLSPIAEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179
            E+ ++  +PD TI +D+  +      Q+ Y    S  + D  + + +  H K    + +
Sbjct: 120 TEMVIENTVPDITIYIDITAE------QSEYRRNVSRLISDRLDSESLEFHRKVFDAYRE 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +    P+R  +++   S   +   ++  +++
Sbjct: 174 VISLNPERFVVINGLQSIPEILDEVITKLFQ 204


>gi|260597469|ref|YP_003210040.1| thymidylate kinase [Cronobacter turicensis z3032]
 gi|260216646|emb|CBA29964.1| Thymidylate kinase [Cronobacter turicensis z3032]
          Length = 212

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 115/219 (52%), Gaps = 15/219 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCG 58
           S  +I  EG+EGAGKTT  +L+   L+     D+  TREPGGT  AE  R ++L   S G
Sbjct: 2   SSKYIVIEGLEGAGKTTARNLVVETLKSLGITDMTFTREPGGTVLAEKLRSLVLDIKSVG 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L 
Sbjct: 62  DEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRELLA 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176
           +L++  + +  PD T+ LD+   IGL+R + R  L   E   LD+F R         R  
Sbjct: 122 TLRQTVLGDFAPDLTLYLDVDPRIGLERARARGELDRIEQESLDFFNRT--------RAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L++A   P R   +D+     +V+ +I + +   VQ++
Sbjct: 174 YLELAAADP-RIITIDACQPLDAVSRDIRSAIARWVQEQ 211


>gi|197294306|ref|YP_001798847.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853633|emb|CAM11504.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 209

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 115/215 (53%), Gaps = 19/215 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG E +GKTT   +L + L    + + +T+EPGG       R  +L+  +     
Sbjct: 1   MFISFEGGEASGKTTLARILAQKLSGNKHQIVLTKEPGGYHPFLFIREKILNPEMPPIDL 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + EA+++AA R +H++N+I PAL E KI++CDR+LDSS+ YQG        +++ + + +
Sbjct: 61  KTEALLYAADRNEHLKNIILPALKENKIVICDRYLDSSFVYQGYARKLGQKYIEYINDFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRV-------QNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++  +P+ T  LDL   I  KR+       QNR  L           + +  H+K R+ +
Sbjct: 121 LKH-LPNITFYLDLDPVIAKKRLELFRPDKQNRLDL-----------ETIEFHQKIREGY 168

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L +A+ +  R   + + +S   +++ I   V  L+
Sbjct: 169 LKLAQKENKRIIKIQADNSLPQLSSLIYQKVKHLL 203


>gi|331672613|ref|ZP_08373402.1| dTMP kinase [Escherichia coli TA280]
 gi|324007852|gb|EGB77071.1| thymidylate kinase [Escherichia coli MS 57-2]
 gi|331070256|gb|EGI41622.1| dTMP kinase [Escherichia coli TA280]
          Length = 213

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A  Q    H +D+    ++V   I   V   V++
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMGAIRTTVTHWVKE 210


>gi|16129061|ref|NP_415616.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655]
 gi|24112504|ref|NP_707014.1| thymidylate kinase [Shigella flexneri 2a str. 301]
 gi|30062632|ref|NP_836803.1| thymidylate kinase [Shigella flexneri 2a str. 2457T]
 gi|74311659|ref|YP_310078.1| thymidylate kinase [Shigella sonnei Ss046]
 gi|82544436|ref|YP_408383.1| thymidylate kinase [Shigella boydii Sb227]
 gi|82777289|ref|YP_403638.1| thymidylate kinase [Shigella dysenteriae Sd197]
 gi|89107944|ref|AP_001724.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110]
 gi|110805112|ref|YP_688632.1| thymidylate kinase [Shigella flexneri 5 str. 8401]
 gi|157157223|ref|YP_001462330.1| thymidylate kinase [Escherichia coli E24377A]
 gi|157160624|ref|YP_001457942.1| thymidylate kinase [Escherichia coli HS]
 gi|170020507|ref|YP_001725461.1| thymidylate kinase [Escherichia coli ATCC 8739]
 gi|170080749|ref|YP_001730069.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B]
 gi|187732338|ref|YP_001880732.1| thymidylate kinase [Shigella boydii CDC 3083-94]
 gi|188495742|ref|ZP_03003012.1| thymidylate kinase [Escherichia coli 53638]
 gi|194429813|ref|ZP_03062327.1| thymidylate kinase [Escherichia coli B171]
 gi|194433682|ref|ZP_03065958.1| thymidylate kinase [Shigella dysenteriae 1012]
 gi|209918353|ref|YP_002292437.1| thymidylate kinase [Escherichia coli SE11]
 gi|218553675|ref|YP_002386588.1| thymidylate kinase [Escherichia coli IAI1]
 gi|218694631|ref|YP_002402298.1| thymidylate kinase [Escherichia coli 55989]
 gi|238900352|ref|YP_002926148.1| thymidylate kinase [Escherichia coli BW2952]
 gi|253773879|ref|YP_003036710.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161204|ref|YP_003044312.1| thymidylate kinase [Escherichia coli B str. REL606]
 gi|256018646|ref|ZP_05432511.1| thymidylate kinase [Shigella sp. D9]
 gi|256023205|ref|ZP_05437070.1| thymidylate kinase [Escherichia sp. 4_1_40B]
 gi|260843338|ref|YP_003221116.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009]
 gi|260854581|ref|YP_003228472.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368]
 gi|260867461|ref|YP_003233863.1| thymidylate kinase [Escherichia coli O111:H- str. 11128]
 gi|293414391|ref|ZP_06657040.1| thymidylate kinase [Escherichia coli B185]
 gi|293433387|ref|ZP_06661815.1| thymidylate kinase [Escherichia coli B088]
 gi|297516810|ref|ZP_06935196.1| thymidylate kinase [Escherichia coli OP50]
 gi|300816798|ref|ZP_07097018.1| thymidylate kinase [Escherichia coli MS 107-1]
 gi|300821123|ref|ZP_07101272.1| thymidylate kinase [Escherichia coli MS 119-7]
 gi|300902489|ref|ZP_07120470.1| thymidylate kinase [Escherichia coli MS 84-1]
 gi|300918704|ref|ZP_07135282.1| thymidylate kinase [Escherichia coli MS 115-1]
 gi|300922624|ref|ZP_07138722.1| thymidylate kinase [Escherichia coli MS 182-1]
 gi|300928351|ref|ZP_07143885.1| thymidylate kinase [Escherichia coli MS 187-1]
 gi|300948684|ref|ZP_07162764.1| thymidylate kinase [Escherichia coli MS 116-1]
 gi|300956239|ref|ZP_07168549.1| thymidylate kinase [Escherichia coli MS 175-1]
 gi|301029599|ref|ZP_07192674.1| thymidylate kinase [Escherichia coli MS 196-1]
 gi|301328531|ref|ZP_07221595.1| thymidylate kinase [Escherichia coli MS 78-1]
 gi|301644512|ref|ZP_07244506.1| thymidylate kinase [Escherichia coli MS 146-1]
 gi|307137733|ref|ZP_07497089.1| thymidylate kinase [Escherichia coli H736]
 gi|307310125|ref|ZP_07589775.1| thymidylate kinase [Escherichia coli W]
 gi|309788170|ref|ZP_07682776.1| thymidylate kinase [Shigella dysenteriae 1617]
 gi|309796559|ref|ZP_07690966.1| thymidylate kinase [Escherichia coli MS 145-7]
 gi|331641641|ref|ZP_08342776.1| dTMP kinase [Escherichia coli H736]
 gi|331652150|ref|ZP_08353169.1| dTMP kinase [Escherichia coli M718]
 gi|331667498|ref|ZP_08368362.1| dTMP kinase [Escherichia coli TA271]
 gi|331676888|ref|ZP_08377584.1| dTMP kinase [Escherichia coli H591]
 gi|61227288|sp|P0A720|KTHY_ECOLI RecName: Full=Thymidylate kinase; AltName: Full=Thymidine
           monophosphate kinase; AltName: Full=dTMP kinase;
           Short=TMPK
 gi|61227291|sp|P0A721|KTHY_SHIFL RecName: Full=Thymidylate kinase; AltName: Full=Thymidine
           monophosphate kinase; AltName: Full=dTMP kinase;
           Short=TMPK
 gi|123342975|sp|Q0T5T8|KTHY_SHIF8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123559364|sp|Q31ZF3|KTHY_SHIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123562339|sp|Q32EV8|KTHY_SHIDS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123617461|sp|Q3Z319|KTHY_SHISS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166987701|sp|A7ZKK1|KTHY_ECO24 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166987702|sp|A7ZZ55|KTHY_ECOHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189028833|sp|B1IUG7|KTHY_ECOLC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732658|sp|B7LX32|KTHY_ECO8A RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621735|sp|B1XA08|KTHY_ECODH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238057698|sp|B6I9H5|KTHY_ECOSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238689520|sp|B2U523|KTHY_SHIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808291|sp|B7LG31|KTHY_ECO55 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|259494268|sp|C4ZS38|KTHY_ECOBW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1244710|gb|AAB06878.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110]
 gi|1787340|gb|AAC74182.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655]
 gi|4062665|dbj|BAA35905.1| thymidylate kinase [Escherichia coli str. K12 substr. W3110]
 gi|24051393|gb|AAN42721.1| thymidylate kinase [Shigella flexneri 2a str. 301]
 gi|30040878|gb|AAP16609.1| thymidylate kinase [Shigella flexneri 2a str. 2457T]
 gi|73855136|gb|AAZ87843.1| thymidylate kinase [Shigella sonnei Ss046]
 gi|81241437|gb|ABB62147.1| thymidylate kinase [Shigella dysenteriae Sd197]
 gi|81245847|gb|ABB66555.1| thymidylate kinase [Shigella boydii Sb227]
 gi|110614660|gb|ABF03327.1| thymidylate kinase [Shigella flexneri 5 str. 8401]
 gi|157066304|gb|ABV05559.1| thymidylate kinase [Escherichia coli HS]
 gi|157079253|gb|ABV18961.1| thymidylate kinase [Escherichia coli E24377A]
 gi|169755435|gb|ACA78134.1| dTMP kinase [Escherichia coli ATCC 8739]
 gi|169888584|gb|ACB02291.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B]
 gi|187429330|gb|ACD08604.1| thymidylate kinase [Shigella boydii CDC 3083-94]
 gi|188490941|gb|EDU66044.1| thymidylate kinase [Escherichia coli 53638]
 gi|194412160|gb|EDX28468.1| thymidylate kinase [Escherichia coli B171]
 gi|194418111|gb|EDX34204.1| thymidylate kinase [Shigella dysenteriae 1012]
 gi|209911612|dbj|BAG76686.1| thymidylate kinase [Escherichia coli SE11]
 gi|218351363|emb|CAU97069.1| thymidylate kinase [Escherichia coli 55989]
 gi|218360443|emb|CAQ97997.1| thymidylate kinase [Escherichia coli IAI1]
 gi|238863660|gb|ACR65658.1| thymidylate kinase [Escherichia coli BW2952]
 gi|242376901|emb|CAQ31619.1| dTMP kinase [Escherichia coli BL21(DE3)]
 gi|253324923|gb|ACT29525.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973105|gb|ACT38776.1| thymidylate kinase [Escherichia coli B str. REL606]
 gi|253977319|gb|ACT42989.1| thymidylate kinase [Escherichia coli BL21(DE3)]
 gi|257753230|dbj|BAI24732.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368]
 gi|257758485|dbj|BAI29982.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009]
 gi|257763817|dbj|BAI35312.1| thymidylate kinase [Escherichia coli O111:H- str. 11128]
 gi|260449763|gb|ACX40185.1| dTMP kinase [Escherichia coli DH1]
 gi|281600514|gb|ADA73498.1| Thymidylate kinase [Shigella flexneri 2002017]
 gi|291324206|gb|EFE63628.1| thymidylate kinase [Escherichia coli B088]
 gi|291434449|gb|EFF07422.1| thymidylate kinase [Escherichia coli B185]
 gi|299877521|gb|EFI85732.1| thymidylate kinase [Escherichia coli MS 196-1]
 gi|300316932|gb|EFJ66716.1| thymidylate kinase [Escherichia coli MS 175-1]
 gi|300405425|gb|EFJ88963.1| thymidylate kinase [Escherichia coli MS 84-1]
 gi|300414139|gb|EFJ97449.1| thymidylate kinase [Escherichia coli MS 115-1]
 gi|300421032|gb|EFK04343.1| thymidylate kinase [Escherichia coli MS 182-1]
 gi|300451823|gb|EFK15443.1| thymidylate kinase [Escherichia coli MS 116-1]
 gi|300463609|gb|EFK27102.1| thymidylate kinase [Escherichia coli MS 187-1]
 gi|300526422|gb|EFK47491.1| thymidylate kinase [Escherichia coli MS 119-7]
 gi|300530572|gb|EFK51634.1| thymidylate kinase [Escherichia coli MS 107-1]
 gi|300845077|gb|EFK72837.1| thymidylate kinase [Escherichia coli MS 78-1]
 gi|301077144|gb|EFK91950.1| thymidylate kinase [Escherichia coli MS 146-1]
 gi|306909843|gb|EFN40337.1| thymidylate kinase [Escherichia coli W]
 gi|308119871|gb|EFO57133.1| thymidylate kinase [Escherichia coli MS 145-7]
 gi|308924022|gb|EFP69523.1| thymidylate kinase [Shigella dysenteriae 1617]
 gi|309701370|emb|CBJ00671.1| Thymidylate kinase [Escherichia coli ETEC H10407]
 gi|313650449|gb|EFS14856.1| thymidylate kinase [Shigella flexneri 2a str. 2457T]
 gi|315060375|gb|ADT74702.1| thymidylate kinase [Escherichia coli W]
 gi|315135730|dbj|BAJ42889.1| thymidylate kinase [Escherichia coli DH1]
 gi|315253898|gb|EFU33866.1| thymidylate kinase [Escherichia coli MS 85-1]
 gi|315618269|gb|EFU98859.1| thymidylate kinase [Escherichia coli 3431]
 gi|320174249|gb|EFW49410.1| Thymidylate kinase [Shigella dysenteriae CDC 74-1112]
 gi|320179203|gb|EFW54161.1| Thymidylate kinase [Shigella boydii ATCC 9905]
 gi|320186954|gb|EFW61667.1| Thymidylate kinase [Shigella flexneri CDC 796-83]
 gi|320200993|gb|EFW75577.1| Thymidylate kinase [Escherichia coli EC4100B]
 gi|323163640|gb|EFZ49462.1| thymidylate kinase [Escherichia coli E128010]
 gi|323165606|gb|EFZ51393.1| thymidylate kinase [Shigella sonnei 53G]
 gi|323175671|gb|EFZ61265.1| thymidylate kinase [Escherichia coli 1180]
 gi|323185779|gb|EFZ71140.1| thymidylate kinase [Escherichia coli 1357]
 gi|323379065|gb|ADX51333.1| thymidylate kinase [Escherichia coli KO11]
 gi|323937838|gb|EGB34102.1| thymidylate kinase [Escherichia coli E1520]
 gi|323942567|gb|EGB38734.1| thymidylate kinase [Escherichia coli E482]
 gi|323947599|gb|EGB43603.1| thymidylate kinase [Escherichia coli H120]
 gi|323962697|gb|EGB58275.1| thymidylate kinase [Escherichia coli H489]
 gi|323973313|gb|EGB68502.1| thymidylate kinase [Escherichia coli TA007]
 gi|324017491|gb|EGB86710.1| thymidylate kinase [Escherichia coli MS 117-3]
 gi|324117331|gb|EGC11238.1| thymidylate kinase [Escherichia coli E1167]
 gi|331038439|gb|EGI10659.1| dTMP kinase [Escherichia coli H736]
 gi|331050428|gb|EGI22486.1| dTMP kinase [Escherichia coli M718]
 gi|331065083|gb|EGI36978.1| dTMP kinase [Escherichia coli TA271]
 gi|331075577|gb|EGI46875.1| dTMP kinase [Escherichia coli H591]
 gi|332089300|gb|EGI94406.1| thymidylate kinase [Shigella boydii 5216-82]
 gi|332092925|gb|EGI97993.1| thymidylate kinase [Shigella dysenteriae 155-74]
 gi|332094408|gb|EGI99457.1| thymidylate kinase [Shigella boydii 3594-74]
 gi|332102067|gb|EGJ05413.1| thymidylate kinase [Shigella sp. D9]
          Length = 213

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A  Q    H +D+    ++V   I   V   V++
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|170768049|ref|ZP_02902502.1| thymidylate kinase [Escherichia albertii TW07627]
 gi|170122815|gb|EDS91746.1| thymidylate kinase [Escherichia albertii TW07627]
          Length = 213

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 117/217 (53%), Gaps = 17/217 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++   +D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A  Q    H +D+     +V   I   V   V+++
Sbjct: 176 ELA-AQDRSIHTIDATQPLDAVMDAIRTTVTNWVKEQ 211


>gi|57239472|ref|YP_180608.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579450|ref|YP_197662.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden]
 gi|58617504|ref|YP_196703.1| thymidylate kinase [Ehrlichia ruminantium str. Gardel]
 gi|73920817|sp|Q5FG91|KTHY_EHRRG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920818|sp|Q5HAD6|KTHY_EHRRW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|57161551|emb|CAH58478.1| putative thymidylate kinase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417116|emb|CAI28229.1| Thymidylate kinase [Ehrlichia ruminantium str. Gardel]
 gi|58418076|emb|CAI27280.1| Thymidylate kinase [Ehrlichia ruminantium str. Welgevonden]
          Length = 202

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 110/199 (55%), Gaps = 17/199 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSC-GVDE 61
           +FI+FEGI+G+GKTT   LL  +L       +V +TREPGGT   E+ R++L S   +D+
Sbjct: 1   MFITFEGIDGSGKTTQSRLLTEYLSGVYGVDNVILTREPGGTFFNESVRNLLFSTKNLDK 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E + F A R +H   VI+PAL + KI++CDRF+DS+ AYQG         ++ L 
Sbjct: 61  L---SELLFFIAMRREHFMKVIKPALTQQKIVICDRFIDSTIAYQGYGHGIDCKLIEELN 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ V ++ P+ T +LD  ++  + R             + +E  D+  + + R  F DI 
Sbjct: 118 DLVV-DIYPNITFVLDSDINQSVARSNK----------NGYEFLDLEFYARVRDGFRDIV 166

Query: 182 RNQPDRCHIVDSAHSFQSV 200
           +    RC+++ +  + +++
Sbjct: 167 KRNQYRCYLITNVDATKNI 185


>gi|121996816|ref|YP_001001603.1| dTMP kinase [Halorhodospira halophila SL1]
 gi|171769495|sp|A1WSY9|KTHY_HALHL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|121588221|gb|ABM60801.1| thymidylate kinase [Halorhodospira halophila SL1]
          Length = 215

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+ EG+EGAGKTT +  +++ L     D  + TREPGGTP  EA R  LL       
Sbjct: 5   GCFITVEGLEGAGKTTCLQAIEQMLLEAGIDRPLFTREPGGTPFGEALRGALLDPQYRGL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AEAEA+   AAR +H+  VIRP L  G+ ++ DRF D++YAYQG         +  L+ 
Sbjct: 65  TAEAEALTVFAARAEHLAQVIRPTLDAGRWVISDRFTDATYAYQGGGRGLGDERIAVLER 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD T++LD+   +G  RV +R         D FE++     +  R  +   A 
Sbjct: 125 WVHGGFTPDRTLLLDVDPTVGRSRVAHR-----GDGEDRFEQERDPFFQAARAAYARRAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P+R   +D+      VA  +   V +L+
Sbjct: 180 ADPERFRCIDANRPEGEVAEQVRAGVADLL 209


>gi|119944852|ref|YP_942532.1| dTMP kinase [Psychromonas ingrahamii 37]
 gi|119863456|gb|ABM02933.1| thymidylate kinase [Psychromonas ingrahamii 37]
          Length = 223

 Score =  105 bits (262), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 10/189 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVL-LSCGVDE 61
           FI  EG+EGAGK+T +S + ++L ++N    D   TREPGGT  AE  R ++ +    ++
Sbjct: 16  FIVIEGLEGAGKSTAVSYITKWLFKQNIATCDTVYTREPGGTELAEKMRDIVKIEVTGEK 75

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VE++I+PAL+ GKI++ DR   SS AYQG         ++ ++
Sbjct: 76  LDDKAELLLMYAARVQLVEHIIKPALVAGKIVVGDRHNMSSLAYQGGGRGIDLALIEVIK 135

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ +   D T+ LD+  ++GL+R + R        LD  ER+ +   ++ R +FL + 
Sbjct: 136 KLALGDFKADLTLYLDIDPELGLQRARGR------GELDRIERQAIDFFDRTRAVFLSLV 189

Query: 182 RNQPDRCHI 190
               +   I
Sbjct: 190 AKDKNAVTI 198


>gi|15801215|ref|NP_287232.1| thymidylate kinase [Escherichia coli O157:H7 EDL933]
 gi|15830730|ref|NP_309503.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai]
 gi|195938857|ref|ZP_03084239.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4024]
 gi|208807792|ref|ZP_03250129.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208815733|ref|ZP_03256912.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208822400|ref|ZP_03262719.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209400206|ref|YP_002269942.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115]
 gi|217328521|ref|ZP_03444603.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588]
 gi|254792480|ref|YP_003077317.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359]
 gi|261226998|ref|ZP_05941279.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256232|ref|ZP_05948765.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK966]
 gi|23821781|sp|Q8X8H6|KTHY_ECO57 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238057697|sp|B5YVW6|KTHY_ECO5E RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12514642|gb|AAG55844.1|AE005319_13 thymidylate kinase [Escherichia coli O157:H7 str. EDL933]
 gi|13360940|dbj|BAB34899.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai]
 gi|208727593|gb|EDZ77194.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208732381|gb|EDZ81069.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208737885|gb|EDZ85568.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209161606|gb|ACI39039.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115]
 gi|209773160|gb|ACI84892.1| thymidylate kinase [Escherichia coli]
 gi|209773162|gb|ACI84893.1| thymidylate kinase [Escherichia coli]
 gi|209773166|gb|ACI84895.1| thymidylate kinase [Escherichia coli]
 gi|217318948|gb|EEC27374.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588]
 gi|254591880|gb|ACT71241.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359]
 gi|320188105|gb|EFW62770.1| Thymidylate kinase [Escherichia coli O157:H7 str. EC1212]
 gi|326339320|gb|EGD63134.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1125]
 gi|326340401|gb|EGD64204.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1044]
          Length = 213

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A  Q    H +D+    ++V   I   V   V++
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTRWVKE 210


>gi|289706872|ref|ZP_06503213.1| dTMP kinase [Micrococcus luteus SK58]
 gi|289556422|gb|EFD49772.1| dTMP kinase [Micrococcus luteus SK58]
          Length = 219

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 1/205 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG +G+GK+T    L   L+   ++V +TREPGG+   E  R +LL  G     
Sbjct: 9   GLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPGHAPVD 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAAAR  H    +RPAL  G +++ DR++DSS AYQG         + +L E 
Sbjct: 69  PRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALNEW 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD T+++D+       R   R +  E    D  ER+    HE  R  FL  A  
Sbjct: 129 ATDGLVPDLTVLIDVDAATAADRRDRRAAGGEG-TPDRMERETADRHEALRAAFLARAAA 187

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+R  ++D A   Q +    L  V
Sbjct: 188 APERYLVLDGALPPQELTARALARV 212


>gi|161503708|ref|YP_001570820.1| thymidylate kinase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189030840|sp|A9MGB6|KTHY_SALAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|160865055|gb|ABX21678.1| hypothetical protein SARI_01792 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 213

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 15/218 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A   P R   +D+     +V  +I   V   VQ + +
Sbjct: 177 LAAQDP-RIRTIDATQPLDAVMRDIRATVTTWVQGQAA 213


>gi|332184711|gb|AEE26965.1| Thymidylate kinase [Francisella cf. novicida 3523]
          Length = 209

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T I+ ++++L++ +     TREPGGT  AE  R+++L    D E  +
Sbjct: 5   FIVIEGLDGAGKSTAINFVRKYLEQNSLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +L +  
Sbjct: 65  DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    PD  I LD+   +GL+R Q   S    E A L++F R         R++F D+ +
Sbjct: 125 LNGCEPDLVIYLDIDPMLGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            + D    +D+A S Q V   I  I+
Sbjct: 177 -ESDNAIEIDAALSIQEVEKQIYLIL 201


>gi|27904814|ref|NP_777940.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|27904212|gb|AAO27045.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 217

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 12/189 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI  EGIEG+GKTT    LK  L      +V   R+PG TP AE  R +L++   
Sbjct: 6   MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 65

Query: 60  DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLF 116
           +E+   E E ++F AAR+  ++N+I+PAL +G  ++ DR+  SS AYQ  G +   + + 
Sbjct: 66  NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 125

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L  LQ + ++   P+ T  LD+  +IGL R++NR        +D  E+         R  
Sbjct: 126 L--LQSLFLKNFNPNITFYLDVTPEIGLNRIKNRNE------IDRIEQNTKFFFNNVRNK 177

Query: 177 FLDIARNQP 185
           +L++ + +P
Sbjct: 178 YLNLIKTKP 186


>gi|29611727|sp|P59500|KTHY_BUCBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 212

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 12/189 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI  EGIEG+GKTT    LK  L      +V   R+PG TP AE  R +L++   
Sbjct: 1   MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 60

Query: 60  DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLF 116
           +E+   E E ++F AAR+  ++N+I+PAL +G  ++ DR+  SS AYQ  G +   + + 
Sbjct: 61  NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L  LQ + ++   P+ T  LD+  +IGL R++NR        +D  E+         R  
Sbjct: 121 L--LQSLFLKNFNPNITFYLDVTPEIGLNRIKNRNE------IDRIEQNTKFFFNNVRNK 172

Query: 177 FLDIARNQP 185
           +L++ + +P
Sbjct: 173 YLNLIKTKP 181


>gi|91210252|ref|YP_540238.1| thymidylate kinase [Escherichia coli UTI89]
 gi|117623283|ref|YP_852196.1| thymidylate kinase [Escherichia coli APEC O1]
 gi|218557979|ref|YP_002390892.1| thymidylate kinase [Escherichia coli S88]
 gi|237706917|ref|ZP_04537398.1| thymidylate kinase [Escherichia sp. 3_2_53FAA]
 gi|331657160|ref|ZP_08358122.1| dTMP kinase [Escherichia coli TA206]
 gi|122424166|sp|Q1RD57|KTHY_ECOUT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221740|sp|A1A9Z2|KTHY_ECOK1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732656|sp|B7MJ85|KTHY_ECO45 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91071826|gb|ABE06707.1| thymidylate kinase [Escherichia coli UTI89]
 gi|115512407|gb|ABJ00482.1| thymidylate kinase [Escherichia coli APEC O1]
 gi|218364748|emb|CAR02438.1| thymidylate kinase [Escherichia coli S88]
 gi|226898127|gb|EEH84386.1| thymidylate kinase [Escherichia sp. 3_2_53FAA]
 gi|294493330|gb|ADE92086.1| thymidylate kinase [Escherichia coli IHE3034]
 gi|307627432|gb|ADN71736.1| thymidylate kinase [Escherichia coli UM146]
 gi|315287441|gb|EFU46852.1| thymidylate kinase [Escherichia coli MS 110-3]
 gi|315296640|gb|EFU55935.1| thymidylate kinase [Escherichia coli MS 16-3]
 gi|323953216|gb|EGB49082.1| thymidylate kinase [Escherichia coli H252]
 gi|323957922|gb|EGB53634.1| thymidylate kinase [Escherichia coli H263]
 gi|331055408|gb|EGI27417.1| dTMP kinase [Escherichia coli TA206]
          Length = 213

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 116/217 (53%), Gaps = 21/217 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  +    PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGGFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211
           ++A  Q    H +D+    ++V     T + N V EL
Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTNWVKEL 211


>gi|323967039|gb|EGB62465.1| thymidylate kinase [Escherichia coli M863]
 gi|327253496|gb|EGE65134.1| thymidylate kinase [Escherichia coli STEC_7v]
          Length = 213

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 116/217 (53%), Gaps = 21/217 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  + 
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYQ 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211
           ++A  Q    H +D+    +SV     T + N V EL
Sbjct: 176 ELA-AQDKSIHTIDATQPLESVMDAIRTTVTNWVKEL 211


>gi|312882454|ref|ZP_07742195.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369854|gb|EFP97365.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 211

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 9/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M S  FI  EG+EGAGK+T I  +++ L       +  TREPGGT  AE  R ++     
Sbjct: 1   MKSAKFIVIEGLEGAGKSTAIRAVEQSLGNLGISQIQKTREPGGTELAEKLRSLVKEEHP 60

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VEN+I+PAL     ++ DR   SS AYQG      +  + 
Sbjct: 61  GEVLQDMTELLLMYAARVQLVENIIKPALENDVWVIGDRHDMSSQAYQGGGRQIANETMS 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++ ++    P+ TI LD+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 121 LLKQTALGCFRPNLTIYLDIEPKLGLERARGR------GELDRIEKMDLGFFERTRQRYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A+ + D   IVD++ S   VA +I  +V + VQK
Sbjct: 175 ELAK-EDDSVFIVDASQSIAQVAESIDKLVTDWVQK 209


>gi|284007284|emb|CBA72610.1| thymidylate kinase [Arsenophonus nasoniae]
          Length = 211

 Score =  105 bits (261), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 15/208 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE--F 62
           +I  EG+EGAGKTT I  + + L      ++  TREPGGTP AE  R  L+  G+ E   
Sbjct: 5   YIVIEGLEGAGKTTAIKTVVQTLATVGITEIDFTREPGGTPLAEKLRQ-LIKHGIAEEKV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  +ENVI+PAL +G+ ++ DR   SS AYQG         +  L+ 
Sbjct: 64  TDKAELLMLYAARIQLIENVIKPALAKGRWVIGDRHDLSSQAYQGGGRGLSPELMKVLRN 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180
             + +  PD T+ LD+   +GL+R ++R  L   E   LD+F+R         RQ +L++
Sbjct: 124 TILDDFRPDLTLYLDIEPALGLQRARDRGELDRIEKESLDFFKRT--------RQRYLEL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A  + D    +D+  S + V   I +++
Sbjct: 176 A-AEDDTIITIDANQSLEEVQKTIHHVL 202


>gi|67458626|ref|YP_246250.1| thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|75536908|sp|Q4UMX3|KTHY_RICFE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|67004159|gb|AAY61085.1| Thymidylate kinase [Rickettsia felis URRWXCal2]
          Length = 206

 Score =  105 bits (261), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTAVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL +G I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMVRKIIPALQDGHIVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  ++RV    +LR  +  + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIERV----NLRNMS--NKFDVRGIDFYKKIYDCFKEL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P+R   + ++
Sbjct: 175 SNRFPERIKTIKAS 188


>gi|332178700|gb|AEE14389.1| Thymidylate kinase [Thermodesulfobium narugense DSM 14796]
          Length = 214

 Score =  104 bits (260), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEGIE  GKTT   LL   L      V   ++PG T   E  R+ LL        
Sbjct: 7   GLFITFEGIEKCGKTTQSKLLYDKLLSLGEKVVYLKDPGVTEVGENFRNALLYG--KNIS 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++F A R   V   I PAL + KI++CDRF DS++AYQG   +    FL SL + 
Sbjct: 65  VETEVLLFLACRAQLVNEHIFPALKDDKIVICDRFSDSTFAYQGYGRNVNLSFLKSLDKF 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + PD T + D       +R  +          D  E + +  H + R  +LD+A  
Sbjct: 125 ATKGIKPDITFLFDFSFFEAKQRFLDSK--------DRMETESIEFHNRVRAGYLDLASM 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +PDR  I+ S  + + +   +L  V E   +R
Sbjct: 177 EPDRFCILYSKLNIEKLHEIVLKKVLERKNER 208


>gi|312793986|ref|YP_004026909.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181126|gb|ADQ41296.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 207

 Score =  104 bits (260), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 8/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 61  MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D   H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIKI------AGKTDRLDLEDFEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           ++   +RC  +++  S + V   +L
Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197


>gi|16760076|ref|NP_455693.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16764555|ref|NP_460170.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29142153|ref|NP_805495.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|167553642|ref|ZP_02347390.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167992017|ref|ZP_02573116.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168239102|ref|ZP_02664160.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194733912|ref|YP_002114205.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197261673|ref|ZP_03161747.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198245346|ref|YP_002215938.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204930858|ref|ZP_03221731.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|213053423|ref|ZP_03346301.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213425024|ref|ZP_03357774.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213579917|ref|ZP_03361743.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213612964|ref|ZP_03370790.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213646378|ref|ZP_03376431.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|54037702|sp|P65247|KTHY_SALTI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|54041416|sp|P65246|KTHY_SALTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690322|sp|B5FKA7|KTHY_SALDC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238693684|sp|B4TTH0|KTHY_SALSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|25288292|pir||AI0642 dTMP kinase (EC 2.7.4.9) - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16419717|gb|AAL20129.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502370|emb|CAD08324.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137782|gb|AAO69344.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|194709414|gb|ACF88635.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197239928|gb|EDY22548.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197288135|gb|EDY27522.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197939862|gb|ACH77195.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204320317|gb|EDZ05521.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205321974|gb|EDZ09813.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205329725|gb|EDZ16489.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261246412|emb|CBG24221.1| dTMP kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992975|gb|ACY87860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301157741|emb|CBW17233.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912188|dbj|BAJ36162.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321223815|gb|EFX48878.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323129469|gb|ADX16899.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326623686|gb|EGE30031.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 213

 Score =  104 bits (260), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 15/218 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A  Q  R   +D+     +V  +I   V + VQ++ +
Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|119775178|ref|YP_927918.1| thymidylate kinase [Shewanella amazonensis SB2B]
 gi|166223115|sp|A1S792|KTHY_SHEAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|119767678|gb|ABM00249.1| thymidylate kinase [Shewanella amazonensis SB2B]
          Length = 208

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 10/206 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSC-GV 59
           N G FI  EG+EGAGK++ I+L+  F+++      V TREPGGTP AE  R ++ +    
Sbjct: 4   NPGKFIVIEGLEGAGKSSAITLVHDFIEKHTGMAPVCTREPGGTPLAEKIRDLVKNAEPG 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++F AAR   V NVI+P+L  G+ +L DR   SS AYQG       L + +
Sbjct: 64  DPLCDEAECLLFYAARAQLVANVIKPSLASGRWVLGDRHNLSSIAYQGGGRGLMSL-VKT 122

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++    PD T+ LD+   +GL+R   R        LD  E++++    + R  FL 
Sbjct: 123 ISDATLGGFKPDLTLYLDIDPLLGLERAARR------GALDRIEQQEIDFFHRARATFLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
            AR+      ++D++     V  +IL
Sbjct: 177 QARDD-SSIVVIDASKPLNEVHKDIL 201


>gi|56413814|ref|YP_150889.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62179720|ref|YP_216137.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161614574|ref|YP_001588539.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|168233077|ref|ZP_02658135.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168244269|ref|ZP_02669201.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168264293|ref|ZP_02686266.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168467156|ref|ZP_02700998.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168822302|ref|ZP_02834302.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194443726|ref|YP_002040454.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450656|ref|YP_002045199.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194472980|ref|ZP_03078964.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197251767|ref|YP_002146843.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197362737|ref|YP_002142374.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|200390972|ref|ZP_03217583.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205353065|ref|YP_002226866.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207857293|ref|YP_002243944.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224584293|ref|YP_002638091.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238910980|ref|ZP_04654817.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|73920828|sp|Q5PGT4|KTHY_SALPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|75483993|sp|Q57QF5|KTHY_SALCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030841|sp|A9N5K6|KTHY_SALPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238689910|sp|B5BAH5|KTHY_SALPK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690068|sp|B5F907|KTHY_SALA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690412|sp|B5QXD6|KTHY_SALEP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690500|sp|B5RBA2|KTHY_SALG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690636|sp|B4TFH5|KTHY_SALHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238693599|sp|B4T332|KTHY_SALNS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808304|sp|C0Q792|KTHY_SALPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56128071|gb|AAV77577.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127353|gb|AAX65056.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363938|gb|ABX67706.1| hypothetical protein SPAB_02323 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402389|gb|ACF62611.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194408960|gb|ACF69179.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459344|gb|EDX48183.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195630427|gb|EDX49053.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197094214|emb|CAR59719.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197215470|gb|ACH52867.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|199603417|gb|EDZ01963.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205272846|emb|CAR37773.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205332642|gb|EDZ19406.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205336753|gb|EDZ23517.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205341244|gb|EDZ28008.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205347282|gb|EDZ33913.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206709096|emb|CAR33429.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468820|gb|ACN46650.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|320086360|emb|CBY96133.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322714190|gb|EFZ05761.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|326628144|gb|EGE34487.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 213

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 15/218 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGIWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A  Q  R   +D+     +V  +I   V + VQ++ +
Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|222528529|ref|YP_002572411.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455376|gb|ACM59638.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725]
          Length = 208

 Score =  104 bits (260), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 8/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 61  MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R+      + +   D  + +D+  H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRI------KMAGKNDRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           ++   +RC  +++  S + V   +L
Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197


>gi|225874540|ref|YP_002755999.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196]
 gi|225791865|gb|ACO31955.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196]
          Length = 219

 Score =  104 bits (259), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 3/218 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G F++FEG++G+GK+T +  L ++L+ +   V VTR+PGGT   +  R +LL    +
Sbjct: 1   MRQGFFLTFEGLDGSGKSTQLRRLAQWLEARGESVVVTRQPGGTRIGDGIRALLLDSRTE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE     + R   +  VIRPAL  GKI+LCDR+ DS+ AYQG         + +L
Sbjct: 61  SISPMAELGFMFSDRAQSIAEVIRPALDAGKIVLCDRYTDSTEAYQGGGRQLGSELVRNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLDYFERKDVMIHEKRRQIF 177
            ++    + PD T++L       L+R +    R + RE      FE+++ + + +    +
Sbjct: 121 HQVMCGGLDPDLTLLLLPDFARSLERARRRNGRVAAREGKDEGRFEQENEIFYRRVFDQY 180

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +IAR +P R   ++S    +S+  +I++IV E + +R
Sbjct: 181 GEIARREPLRVVAIESDEGIESIHQHIVHIVEERLARR 218


>gi|297563869|ref|YP_003682842.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296848318|gb|ADH70336.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 707

 Score =  104 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 14/194 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI  EG EGAGK+T +  L  +L+ + ++V  TR+PG T      R +LL       
Sbjct: 480 AGAFIVVEGGEGAGKSTQVRELTVWLRDQGFEVIGTRQPGATKLGMRLRGLLLDRENSHI 539

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++AA + DHV+  I PAL  G +++ DR++DS  AYQG   S + L  D ++ 
Sbjct: 540 TPRAEVLLYAADKADHVQQEILPALRRGAVVISDRYVDSLLAYQG---SGRDLSSDEIRR 596

Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           IS    Q ++PD T++LD+  + GL R+            D  E +    H++ R+ FL+
Sbjct: 597 ISDWATQGLVPDLTVLLDVRPEDGLSRL--------GGPADRIEGEPAEFHDRVRRGFLE 648

Query: 180 IARNQPDRCHIVDS 193
           +AR  P+R  ++D+
Sbjct: 649 LARAAPERYLVLDA 662


>gi|198283696|ref|YP_002220017.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667539|ref|YP_002426325.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248217|gb|ACH83810.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519752|gb|ACK80338.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 214

 Score =  104 bits (259), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SG F++ EGIEGAGK++ + +L     ++ Y V VTREPGG P  EA R + L   +  
Sbjct: 7   KSGFFLTLEGIEGAGKSSALPVLAELCHQQGYAVEVTREPGGGPLGEALRTIFLDDSLHL 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   +++ A R +H    I PAL  GK+++ DR+ DS+YAYQ          + +L 
Sbjct: 67  DADEELLLLY-AGRRNHWRTRIAPALAAGKVVISDRYEDSTYAYQSGGRGVPPAHIAALA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     PD T   D+  ++G  R++ R         D  E++D     + R +F +  
Sbjct: 126 RWAGITRRPDLTFWFDIAPELGAARIRMRRP-------DRLEQEDQAFFRRARAVFAERC 178

Query: 182 RNQPDRCHIVDSA 194
             +P R   VD++
Sbjct: 179 AAEPQRIWRVDAS 191


>gi|260773142|ref|ZP_05882058.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14]
 gi|260612281|gb|EEX37484.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14]
          Length = 211

 Score =  104 bits (259), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG+EGAGK+T I ++   LQ    + +  TREPGGT  AE  R ++      E   
Sbjct: 5   FIVVEGLEGAGKSTAIQVVIDTLQAFGIESITQTREPGGTVLAEKMRALVKEDHPGEVLQ 64

Query: 65  E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +  L+++
Sbjct: 65  DVTEVLLMYAARVQLVENVIKPALAAGCWVVGDRHDMSSQAYQGGGRQISPATMQQLKQL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++    PD T+ LD+   +GL+R + R        LD  ER D+   E+ RQ +L++A++
Sbjct: 125 ALGAFSPDFTLYLDIDPRVGLERARGR------GELDRIERMDLSFFERTRQRYLELAKD 178

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
            P    I+++  + Q+V  +I
Sbjct: 179 NPS-VTIINAQQTLQAVTQDI 198


>gi|157804070|ref|YP_001492619.1| thymidylate kinase [Rickettsia canadensis str. McKiel]
 gi|166223111|sp|A8EZQ1|KTHY_RICCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157785333|gb|ABV73834.1| thymidylate kinase [Rickettsia canadensis str. McKiel]
          Length = 203

 Score =  104 bits (259), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG+GK+T   +L  +L+ +N  V +TRE GGT  +E  R +L+    +
Sbjct: 4   LTQGKFITFEGGEGSGKSTQSQMLYEYLKSQNTPVILTREVGGTIVSEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I P L EG I++CDRFLDS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMVRKIIPVLKEGYIVICDRFLDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV    +LR  +  + F+ + +  + K    F ++
Sbjct: 121 HKTLMPPLMPDITFFIDVEPDTAIKRV----NLRNMS--NKFDIRGIDFYNKIYDCFKEL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P R   + ++
Sbjct: 175 SNRFPARIKTIKAS 188


>gi|240047504|ref|YP_002960892.1| Thymidylate kinase [Mycoplasma conjunctivae HRC/581]
 gi|239985076|emb|CAT05069.1| Thymidylate kinase [Mycoplasma conjunctivae]
          Length = 209

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FI+FEGI+G GKTT ++L  ++LQ+K    ++ VTREPGGT   EA   R + L    D
Sbjct: 1   MFITFEGIDGCGKTTVLNLFAKYLQKKFPTREIIVTREPGGTGVVEAEKVREIALDRNHD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +E ++ A +R  H+E +I PAL E KI+LCDR++DSS AYQG         +  +
Sbjct: 61  -ISPYSEMLLMATSRRMHLEKLIWPALKENKIILCDRYIDSSIAYQGFGLQLGEQLVSMV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +      PD T  +D+   +  +R+    + +     D  E +    + +  + F  +
Sbjct: 120 NNLISNNTKPDITFFIDVEPKVAFERMSQIINHKR----DRLEIRGRQFYLRVIEGFNFV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
           A+ +P+    +   +  + V  N++N+
Sbjct: 176 AKQRPNNFFKISGNNQPEEVLANVINV 202


>gi|312601234|gb|ADQ90489.1| Thymidylate kinase [Mycoplasma hyopneumoniae 168]
          Length = 211

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 11/169 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    ++  T EPGG    EA   R  LLS   +
Sbjct: 1   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALLIREFLLSKN-N 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 60  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119

Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164
             +  +   PD TI LD+ +      +G+ R  NR  L E+  ++++ER
Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERMGIFRDHNRDRL-ENKGVEFYER 167


>gi|1246364|gb|AAA93513.1| thymidylate:zeocin resistance protein:NDP kinase fusion protein
           [Cloning vector pZEO-SG4]
          Length = 494

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 6   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 66  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 124

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 125 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A  Q    H +D+    ++V   I   V   V++
Sbjct: 177 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 211


>gi|148377947|ref|YP_001256823.1| thymidylate kinase [Mycoplasma agalactiae PG2]
 gi|229621732|sp|A5IZC6|KTHY_MYCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148291993|emb|CAL59385.1| Thymidylate kinase [Mycoplasma agalactiae PG2]
          Length = 215

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 12/206 (5%)

Query: 5   LFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT +  L+++ L++K      VTREPGG     +E  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTIVQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILDKE-S 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +EA+++ A+R  H+E VI PAL E K++LCDR++DS YAYQG        F   L
Sbjct: 60  RLSPISEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179
            E+ ++  +PD TI +D+  +      Q+ Y    S  + D  + + +  H+K    + +
Sbjct: 120 TEMVIESTIPDITIFIDITAE------QSEYRRNVSRLISDRLDSESLEFHKKVFDAYKE 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
           +    P R  IV+   S   +   I+
Sbjct: 174 VINLDPKRFIIVNGLQSIPEILDEIV 199


>gi|237653168|ref|YP_002889482.1| thymidylate kinase [Thauera sp. MZ1T]
 gi|237624415|gb|ACR01105.1| thymidylate kinase [Thauera sp. MZ1T]
          Length = 233

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 10/208 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK++ I+ +   LQ    DV  TREPGGT   E  R +LL    +   
Sbjct: 31  GRFITFEGIDGAGKSSQIAAVVALLQAAGRDVDQTREPGGTALGERLRELLLH---EPMH 87

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
            E EA++  AAR +H+   I PAL  G+ ++CDRF D+++AYQ G R   +  F D+L+ 
Sbjct: 88  LETEAMLMFAARREHLAARIEPALAAGRWVVCDRFSDATFAYQVGGRGLDRAKF-DALEA 146

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T++ DL   +   RV +          D FER+     E+ R  +L+ AR
Sbjct: 147 WVHPGLQPDLTLVFDLDPALAAARVAS-----TGVDPDRFEREQRDFFERVRAAYLERAR 201

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P R  ++D+A S +++  +I  +V E
Sbjct: 202 LAPLRICVIDAARSPEAIRADIERVVRE 229


>gi|57234426|ref|YP_181510.1| thymidylate kinase [Dehalococcoides ethenogenes 195]
 gi|123618736|sp|Q3Z8D9|KTHY_DEHE1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|57224874|gb|AAW39931.1| thymidylate kinase [Dehalococcoides ethenogenes 195]
          Length = 207

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 7/192 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++      +T EPGGT + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGTRSGDKITRLLKWSEEENISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A+R   ++NVI+PAL++G I++CDR+ DS+ AYQG     +   +  +  ++
Sbjct: 63  LAELFLFNASRSILIDNVIKPALLDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD TI LD+     L R       +     D FE ++   H++ R  F  IA  +
Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175

Query: 185 PDRCHIVDSAHS 196
           P+R   +D++ S
Sbjct: 176 PNRFLKLDASLS 187


>gi|221195667|ref|ZP_03568721.1| thymidylate kinase [Atopobium rimae ATCC 49626]
 gi|221184433|gb|EEE16826.1| thymidylate kinase [Atopobium rimae ATCC 49626]
          Length = 239

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 7/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EGI+G GK+T   LL   L + + ++   REPGGT  +E  R +LL     +  
Sbjct: 20  GLFITLEGIDGVGKSTQADLLAEALMQTDKELVRLREPGGTAISEKIRALLLDASNTDMA 79

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E +++ A+R   V  VI PAL  G I+LCDRF DS++AYQ          +    ++
Sbjct: 80  DECELLLYEASRAQLVRQVIEPALARGAIVLCDRFYDSTFAYQAGGRGIDEKVVRRANDL 139

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               V+P  T+I DL      +R     +       D  E +        R+ ++ ++  
Sbjct: 140 GSCGVVPTRTLIFDLEPAEAFQRATTNGA-------DRMEAEGAAFQRCVREAYIRLSVA 192

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P R H+V +  +   V    +  + +LV
Sbjct: 193 EPSRVHVVSAYGTIAEVHARTVADLCDLV 221


>gi|256545293|ref|ZP_05472657.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170]
 gi|256398974|gb|EEU12587.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170]
          Length = 209

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GL I FEG +G+GKTT +  +   L    YD++  REPGGT  +E  R ++L     E 
Sbjct: 2   NGLLIVFEGPDGSGKTTVLEKVYNKLLEDGYDIYKFREPGGTDISEKIREIILDNENIEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA+R   V   +RP L +G I+LCDRF+ SS  YQG     + L +D ++ 
Sbjct: 62  NPRCEALLYAASRAQLVGEKLRPLLEKGSIILCDRFVLSSMLYQG---IGRGLGVDEVKN 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           I   ++ E+  D T+ L++     + R       R++   D  E +D   H+K    +++
Sbjct: 119 INDFAIGEIRADLTLFLNIDYKTAIDRK------RKNFISDRLENEDDSFHKKTYDGYIE 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +++   D    +D+  S  +V  N L  +   ++++
Sbjct: 173 LSKRFKDEIISIDANKSIDTVVDNCLATIKTYLKEK 208


>gi|213054494|gb|ACJ39423.1| thymidine monophospho kinase [Staphylococcus aureus]
 gi|213054496|gb|ACJ39424.1| thymidine monophospho kinase [Staphylococcus aureus]
          Length = 176

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 7/170 (4%)

Query: 31  KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG 90
           K+YDV +TREPGG P  E  R ++L    ++     EA++FAA+R +H+   + PAL EG
Sbjct: 12  KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIRTEAMLFAASRREHLVLKVIPALKEG 69

Query: 91  KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           K++LCDR++DSS AYQG         + +L E ++  + PD TI L++  ++G +R+   
Sbjct: 70  KVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERI--- 126

Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
             ++ S   +  +++D+  HEK  + + +I  N+  R   V++    ++V
Sbjct: 127 --IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENV 174


>gi|308186414|ref|YP_003930545.1| Thymidylate kinase [Pantoea vagans C9-1]
 gi|308056924|gb|ADO09096.1| Thymidylate kinase [Pantoea vagans C9-1]
          Length = 210

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT   +++     R   D+  TREPGGTP AE  R VL+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDAIVATLHARGISDLVFTREPGGTPLAEQLR-VLVKQGI 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +  +   +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  EGEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSGLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +L++  + +  PD T+ LD+  +IGL+R + R        LD  E++ +   E+ R  +
Sbjct: 119 QTLRDAVLGDFRPDLTLYLDVTPEIGLQRARAR------GELDRIEQESLRFFERTRARY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
           L +A   P     +D+  S   V  ++
Sbjct: 173 LTLAAEDPT-ILTIDATQSLTEVTASL 198


>gi|42522597|ref|NP_967977.1| hypothetical protein Bd1040 [Bdellovibrio bacteriovorus HD100]
 gi|59798302|sp|Q6MP28|KTHY_BDEBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|39575129|emb|CAE78970.1| tmk [Bdellovibrio bacteriovorus HD100]
          Length = 214

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 1/205 (0%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEG++G+GK++ ++ L+R LQ +  +   TREPGGTP  +  R+++L          
Sbjct: 7   FIVFEGLDGSGKSSLMAALERELQNRAINFLRTREPGGTPLGDEIRNMILRKEGPAPTPR 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E +++ A+R  HV+ VIRPAL  G  +LCDRF  SS A+Q    +     +  L   + 
Sbjct: 67  TELLLYEASRSQHVDQVIRPALAAGTWVLCDRFAASSVAFQSGGRAISEADVVMLNTFAT 126

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             +  D T++LDL V+   +R Q R ++      D  E +    HE  RQ FL  +R   
Sbjct: 127 GGLKADITVLLDLSVEESRRRRQGRGAV-TGETEDRIESEADTFHENVRQSFLKQSREDA 185

Query: 186 DRCHIVDSAHSFQSVATNILNIVWE 210
               ++D+  + + +   +L  + E
Sbjct: 186 AAWIVLDARETPEVLFKQLLQSLTE 210


>gi|283833607|ref|ZP_06353348.1| dTMP kinase [Citrobacter youngae ATCC 29220]
 gi|291071290|gb|EFE09399.1| dTMP kinase [Citrobacter youngae ATCC 29220]
          Length = 213

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALARGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD TI LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A         +D+    ++V  +I N +   V+++
Sbjct: 177 LAAKDAS-IRTIDATQPLEAVMADIRNTITRWVKEQ 211


>gi|299143254|ref|ZP_07036334.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517739|gb|EFI41478.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 203

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 10/210 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F++FEG +G GK+T  +L+   L +  YDV  TREPGGT  +E  R+++L     E  
Sbjct: 3   GIFVTFEGPDGCGKSTIANLVYEKL-KAEYDVVKTREPGGTKISEKIRNIILDNENIEMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  EA+++AA+R  HVE  I PAL  G I+LC+RF+ SS AYQG         ++++ + 
Sbjct: 62  SRTEALLYAASRAQHVEEKILPALKNGSIVLCERFVLSSIAYQGFGRGLGRESIENINKF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  EV PD   + D        R       R   C + F       H + ++ + ++A+ 
Sbjct: 122 ATGEVEPDVVFLFDTGNISSENRKLEFGGDRIEICGNEF-------HSRVKEAYRELAKE 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +  +  ++D+    + V  + L+I+++ ++
Sbjct: 175 K--KYCVIDATRGIEEVLNDCLDILYKKLE 202


>gi|312971234|ref|ZP_07785412.1| thymidylate kinase [Escherichia coli 1827-70]
 gi|310336436|gb|EFQ01622.1| thymidylate kinase [Escherichia coli 1827-70]
          Length = 213

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A  +    H +D+    ++V   I   V   V++
Sbjct: 176 ELA-AKDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|1246361|gb|AAA93511.1| thymidine:thymidylate kinase:zeocin resistance fusion protein
           [Cloning vector pZEO-SG3]
          Length = 560

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 17/221 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---S 56
           M    +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S
Sbjct: 215 MARSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 274

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHL 115
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+
Sbjct: 275 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 334

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKR 173
            L +L++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         
Sbjct: 335 -LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT-------- 385

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           R  +L++A  Q    H +D+    ++V   I   V   V++
Sbjct: 386 RARYLELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 425


>gi|322616575|gb|EFY13484.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322619910|gb|EFY16784.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622478|gb|EFY19323.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322629405|gb|EFY26182.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633924|gb|EFY30662.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636854|gb|EFY33557.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641346|gb|EFY37985.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645110|gb|EFY41639.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322652275|gb|EFY48631.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655626|gb|EFY51928.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660931|gb|EFY57161.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322665484|gb|EFY61672.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322667539|gb|EFY63700.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673666|gb|EFY69768.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677592|gb|EFY73656.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322679743|gb|EFY75782.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687215|gb|EFY83187.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323194002|gb|EFZ79203.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323199411|gb|EFZ84504.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202426|gb|EFZ87468.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323208861|gb|EFZ93799.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213786|gb|EFZ98566.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217835|gb|EGA02550.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323221677|gb|EGA06089.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323224737|gb|EGA09005.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229637|gb|EGA13760.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323232862|gb|EGA16958.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240102|gb|EGA24146.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242911|gb|EGA26932.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323246826|gb|EGA30796.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323252039|gb|EGA35901.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255540|gb|EGA39299.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261608|gb|EGA45185.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266968|gb|EGA50453.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272072|gb|EGA55486.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 213

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 115/218 (52%), Gaps = 15/218 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L   + G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRAVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A  Q  R   +D+     +V  +I   V + VQ++ +
Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|71279228|ref|YP_269022.1| thymidylate kinase [Colwellia psychrerythraea 34H]
 gi|123632593|sp|Q482J5|KTHY_COLP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71144968|gb|AAZ25441.1| thymidylate kinase [Colwellia psychrerythraea 34H]
          Length = 212

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++G FI  EG+EGAGK++ I++++  L +   +   TREPGGTP AE+ R ++ S    
Sbjct: 1   MSTGKFIVIEGMEGAGKSSAIAVIESTLNKHGIEYINTREPGGTPLAESLRDMVKSVDHQ 60

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E    E E ++  A+R   + N I PAL  GK ++ DR   SS AYQG         +++
Sbjct: 61  EKLTVETELLLMYASRSQLLANKILPALAAGKWVIGDRHDLSSRAYQGGGRGFDETIMNT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIF 177
           + +I+++   PD T+ LD+   IGL R + R  L   E   +++F R    +H K R++ 
Sbjct: 121 ISDITLKGFRPDITLYLDIDPHIGLSRAKARGDLDRIELEKMEFFIR----VHNKYREL- 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
                 Q D    VD+A +   V  ++
Sbjct: 176 ----AEQDDSIITVDAAQAMLKVHQDV 198


>gi|332141143|ref|YP_004426881.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693284|sp|B4S1N2|KTHY_ALTMD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|327551165|gb|AEA97883.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 222

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 11/215 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGK++ I L+ + L      V  TREPGGTP AEA R  +     +   
Sbjct: 3   GKFIVVEGLEGAGKSSVIGLIVKALTDAGMRVEQTREPGGTPMAEAIRECVKHDWDETVS 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++  AAR+  + N I P+L  G  ++ DR   SS AYQG         + ++ +I
Sbjct: 63  EETELLLMYAARVQLLTNKIYPSLNAGAWVVGDRHDLSSQAYQGGGRGVSEKTMTAISDI 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++    PD T+ LD+   +GL+R + R  L   E A L +FER         R  +L +A
Sbjct: 123 ALNGFKPDLTLYLDVDPAVGLERARGRGELDRIEQAGLGFFERT--------RARYLSLA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            N  +   +V++    + V  ++++I+   V + +
Sbjct: 175 END-ESIIVVNAMQPMEQVHQDVISIIANYVSQHI 208


>gi|262170995|ref|ZP_06038673.1| thymidylate kinase [Vibrio mimicus MB-451]
 gi|261892071|gb|EEY38057.1| thymidylate kinase [Vibrio mimicus MB-451]
          Length = 212

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   L +   D +  TREPGGT  AE  R ++     
Sbjct: 1   MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A +  +   ++D+A S + V+ +I
Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDI 198


>gi|124024915|ref|YP_001014031.1| thymidylate kinase [Prochlorococcus marinus str. NATL1A]
 gi|166223099|sp|A2BZV6|KTHY_PROM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123959983|gb|ABM74766.1| Thymidylate kinase [Prochlorococcus marinus str. NATL1A]
          Length = 211

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 6/144 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI FEGI+G+GKTT I+ L ++L       +N  + +TREPGGT   ++ R +LL   
Sbjct: 3   GKFIVFEGIDGSGKTTQINQLSKWLISTDLIPENNKLVITREPGGTQLGKSIRSLLLDTS 62

Query: 59  VDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +++   +  E +++AA R  HV  +IRP L +G  ++ DRF  S+ AYQG         +
Sbjct: 63  IEKSPDSITELLLYAADRSQHVNEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDITLI 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVD 141
             L+ I+ Q + PD T +LD+P++
Sbjct: 123 KDLEAIATQGIAPDITFLLDIPIE 146


>gi|254507623|ref|ZP_05119756.1| thymidylate kinase [Vibrio parahaemolyticus 16]
 gi|219549510|gb|EED26502.1| thymidylate kinase [Vibrio parahaemolyticus 16]
          Length = 210

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 9/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FI  EG+EGAGK+T I+ +   L++   + +  TREPGGT  AE  R ++     
Sbjct: 1   MSQAKFIVIEGLEGAGKSTAINAVMETLKQAGVERIKNTREPGGTVLAEKLRTLVKQEHD 60

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 61  GEILQDMTELLLMYAARVQLVENVIKPALESGTWVVGDRHDMSSQAYQGGGRQIAKETMA 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD TI LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 SLKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A N  +   +V++  +   VA +I
Sbjct: 175 EMA-NADESVMVVNAEQTIDKVAADI 199


>gi|218549175|ref|YP_002382966.1| thymidylate kinase [Escherichia fergusonii ATCC 35469]
 gi|226732661|sp|B7LT40|KTHY_ESCF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218356716|emb|CAQ89344.1| thymidylate kinase [Escherichia fergusonii ATCC 35469]
 gi|324113893|gb|EGC07867.1| thymidylate kinase [Escherichia fergusonii B253]
 gi|325497596|gb|EGC95455.1| thymidylate kinase [Escherichia fergusonii ECD227]
          Length = 213

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    ++  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIREMIFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITEKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGVDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A  Q      +D+  S + V  +I   V   V+++
Sbjct: 177 LA-AQDASIRTIDATQSLECVMADIRQTVTTWVKEQ 211


>gi|302871135|ref|YP_003839771.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573994|gb|ADL41785.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47]
          Length = 210

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 1/148 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLFKVEKYLKDKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 61  MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSIVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ 148
             I   ++ PD  I+L L  +I ++R+Q
Sbjct: 120 NSIFEDKIKPDLYIVLTLEPEIAIQRIQ 147


>gi|323175251|gb|EFZ60864.1| thymidylate kinase [Escherichia coli LT-68]
          Length = 213

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 17/216 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              +AE ++F AAR+  +E VI+PAL  G  ++ DR   S+ AYQ G R   QH+ L +L
Sbjct: 65  ITDKAEVLMFYAARVQLIETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
           ++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L
Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A       H +D+    ++V   I   V   V++
Sbjct: 176 ELAAKDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|260899207|ref|ZP_05907602.1| dTMP kinase [Vibrio parahaemolyticus AQ4037]
 gi|308108494|gb|EFO46034.1| dTMP kinase [Vibrio parahaemolyticus AQ4037]
          Length = 209

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++L    Q    ++  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQINASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    ++++  S + V+ +I + + E + ++
Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209


>gi|312128360|ref|YP_003993234.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778379|gb|ADQ07865.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 210

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GK+T I  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKSTQIVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 61  MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D+  H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIKM------AGKNDRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           ++   +RC  +++  S + V   +
Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKV 196


>gi|311279996|ref|YP_003942227.1| thymidylate kinase [Enterobacter cloacae SCF1]
 gi|308749191|gb|ADO48943.1| thymidylate kinase [Enterobacter cloacae SCF1]
          Length = 213

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 11/214 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   ++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQMGIRDLLFTREPGGTILAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  GK ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDPQMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+  ++GL R + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLGRARAR------GDLDRIEQESLNFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             Q    H +D+      V   I + V   VQ++
Sbjct: 179 -AQDASIHTIDATQPLDDVMRAIRDTVTRWVQEQ 211


>gi|237731030|ref|ZP_04561511.1| thymidylate kinase [Citrobacter sp. 30_2]
 gi|226906569|gb|EEH92487.1| thymidylate kinase [Citrobacter sp. 30_2]
          Length = 213

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 15/216 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAKGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  + +  PD TI LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A         +D+    ++V  +I + + + V+++
Sbjct: 177 LAAKDTS-IRTIDATQPLEAVMADIRHTITQWVKEQ 211


>gi|213864741|ref|ZP_03386860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 213

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 15/218 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  +    PD T+ LD+  ++GLKR + R  L   E    D+F R         R  +L+
Sbjct: 125 DAVLGVFSPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A  Q  R   +D+     +V  +I   V + VQ++ +
Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|270308091|ref|YP_003330149.1| thymidylate kinase [Dehalococcoides sp. VS]
 gi|270153983|gb|ACZ61821.1| thymidylate kinase [Dehalococcoides sp. VS]
          Length = 207

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 10/212 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++   +  +T EPGGT + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKLGLECVLTHEPGGTRSGDKITRLLKWSKEENISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A+R   ++NVI+PAL +G I++CDR+ DS+ AYQG     +   +  +  ++
Sbjct: 63  LTELLLFNASRSILIDNVIKPALQDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD TI LD+     L R       +     D FE ++   H++ R  F  IA  +
Sbjct: 123 NGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175

Query: 185 PDRCHIVDSAHSFQSVATNI---LNIVWELVQ 213
           P+R   +D++     +A  I   +N++ +L Q
Sbjct: 176 PNRFLKLDASLPQSELARCIRQRVNVLLKLPQ 207


>gi|239916913|ref|YP_002956471.1| thymidylate kinase [Micrococcus luteus NCTC 2665]
 gi|281414632|ref|ZP_06246374.1| thymidylate kinase [Micrococcus luteus NCTC 2665]
 gi|239838120|gb|ACS29917.1| thymidylate kinase [Micrococcus luteus NCTC 2665]
          Length = 219

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 1/205 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG +G+GK+T    L   L+   ++V +TREPGG+   E  R +LL        
Sbjct: 9   GLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPEHAPVD 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAAAR  H    +RPAL  G +++ DR++DSS AYQG         + +L E 
Sbjct: 69  PRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALNEW 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD T+++D+       R   R +  E A  D  ER+    HE  R  FL  A  
Sbjct: 129 ATDGLVPDLTVLIDVDAATAADRRDRRAAGGEGAP-DRMERETADRHEALRAAFLARAAA 187

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+R  ++D A   Q +    L  V
Sbjct: 188 APERYLVLDGALPPQELTARALARV 212


>gi|28898823|ref|NP_798428.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260879164|ref|ZP_05891519.1| dTMP kinase [Vibrio parahaemolyticus AN-5034]
 gi|31340183|sp|Q87N26|KTHY_VIBPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28807042|dbj|BAC60312.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308093561|gb|EFO43256.1| dTMP kinase [Vibrio parahaemolyticus AN-5034]
          Length = 210

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++L    Q    ++  TREPGGTP AE  R ++      +E  
Sbjct: 6   FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 66  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 126 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    ++++  S + V+ +I + + E + ++
Sbjct: 180 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 210


>gi|312623182|ref|YP_004024795.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203649|gb|ADQ46976.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 208

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 8/205 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 61  MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R+      + +   D  + +D+  H      F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRI------KMAGKNDKLDLEDLEFHRLVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           ++   +RC  +++  S + V   +L
Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197


>gi|153838848|ref|ZP_01991515.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810]
 gi|308095583|ref|ZP_05906946.2| dTMP kinase [Vibrio parahaemolyticus Peru-466]
 gi|308125924|ref|ZP_05778121.2| dTMP kinase [Vibrio parahaemolyticus K5030]
 gi|149747732|gb|EDM58632.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810]
 gi|308089015|gb|EFO38710.1| dTMP kinase [Vibrio parahaemolyticus Peru-466]
 gi|308114687|gb|EFO52227.1| dTMP kinase [Vibrio parahaemolyticus K5030]
          Length = 209

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++L    Q    ++  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    ++++  S + V+ +I + + E + ++
Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209


>gi|13507745|ref|NP_109694.1| thymidylate kinase [Mycoplasma pneumoniae M129]
 gi|2497578|sp|P75106|KTHY_MYCPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1673808|gb|AAB95796.1| thymidylate kinase [Mycoplasma pneumoniae M129]
 gi|301633244|gb|ADK86798.1| dTMP kinase [Mycoplasma pneumoniae FH]
          Length = 210

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 5/152 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G+F++ EG++GAGKT  +   K RF Q    +    +REPGGTP AE  R +LL   
Sbjct: 1   MKQGVFVAIEGVDGAGKTVLLEAFKQRFPQSFLGFKTLFSREPGGTPLAEKIRALLLHEA 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           ++      EA +FAA+R +HV  +I+PAL + ++++ DRF+ SSYAYQG         + 
Sbjct: 61  MEPL---TEAYLFAASRTEHVRQLIQPALQQKQLVIVDRFVWSSYAYQGLIKKVGLDVVK 117

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            L   +V + MPD T I+D   +  L R+  R
Sbjct: 118 KLNADAVGDSMPDFTFIVDCDFETALNRMAKR 149


>gi|269114872|ref|YP_003302635.1| thymidylate kinase (dTMP kinase) [Mycoplasma hominis]
 gi|268322497|emb|CAX37232.1| Thymidylate kinase (dTMP kinase) [Mycoplasma hominis ATCC 23114]
          Length = 213

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 9/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAA--RHVLLS 56
           M+ G F+ FEG++G+GKTT I  LK +L+ KN   D   TREPG + + EA   R ++L 
Sbjct: 1   MSKGKFVVFEGMDGSGKTTIIKKLKEYLESKNRLDDFVFTREPGSSHSKEAEEIRQLILD 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              + F    +A++FAA+R  ++E  + P L + K ++ DR+  SS+ YQG         
Sbjct: 61  ND-NSFSVMVDALLFAASRRLNLEKCVWPGLKKNKTVISDRYWTSSFVYQGVLGGLGLKK 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +  I+ +E  PD TI  D+  ++ ++R+     +R++   D  E  +V  ++K R  
Sbjct: 120 VKDINNIATEETTPDLTIFFDMEPELSVERIT---QIRKTKT-DRLESTNVEYYKKLRDS 175

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  +     ++  I+ S  +   +   +LN++ E
Sbjct: 176 YWYVINQGNEKYEIIKSDCNIDELFKRVLNVLKE 209


>gi|187251864|ref|YP_001876346.1| thymidylate kinase [Elusimicrobium minutum Pei191]
 gi|186972024|gb|ACC99009.1| Thymidylate kinase [Elusimicrobium minutum Pei191]
          Length = 203

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 9/206 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEG +  GK+T  +LL+++L+   Y+V  TREPGGTP +E  R +LL    +     
Sbjct: 4   FIVFEGPDRGGKSTQANLLRKYLEAAGYNVLQTREPGGTPVSEGIRKILLDP-ENSVSPR 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE +++ A+R  H E  I PAL E KI++C+R+  S+ AYQG         ++++  I+ 
Sbjct: 63  AELLLYEASRAQHTEEKILPALQEDKIVICERYTMSTCAYQGYGRGFDMDLINTVNNIAT 122

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T +  +      +R +  +S       D  E +     EK RQ + ++ +  P
Sbjct: 123 HGLQPDLTFVFLMSDKYFTERGEYLFS-------DRLELEGNEFREKMRQGYKELVKITP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211
           +   ++D+ ++ + +   +L  + E 
Sbjct: 176 NAV-LIDADNTVEEIHAKVLGHLKEF 200


>gi|72383332|ref|YP_292687.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A]
 gi|123620515|sp|Q46HP4|KTHY_PROMT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72003182|gb|AAZ58984.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A]
          Length = 211

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 6/144 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI FEGI+G+GKTT I+ L ++L       +N  + +TREPGGT   ++ R +LL   
Sbjct: 3   GKFIVFEGIDGSGKTTQINQLSKWLISSDLIPENNKLVITREPGGTKLGKSIRSLLLDTS 62

Query: 59  VDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +++   +  E +++AA R  H+  +IRP L +G  ++ DRF  S+ AYQG         +
Sbjct: 63  IEKSPDSITELLLYAADRSQHINEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDINLI 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVD 141
             L+ I+ Q + PD T +LD+P++
Sbjct: 123 KDLEAIATQGIAPDITFLLDIPIE 146


>gi|259908791|ref|YP_002649147.1| thymidylate kinase [Erwinia pyrifoliae Ep1/96]
 gi|224964413|emb|CAX55922.1| Thymidylate kinase (DTMP kinase) [Erwinia pyrifoliae Ep1/96]
 gi|283478770|emb|CAY74686.1| tmk [Erwinia pyrifoliae DSM 12163]
          Length = 210

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDAVVSELQRHGINDIVFTREPGGTPLAEKLRD-LIKQGI 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +       AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  EGERVTNSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMNSDLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R+ +
Sbjct: 119 NCLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           L +A +   R   +D+    + V   +   + + +Q++
Sbjct: 173 LALA-SADSRIKTIDATRPLEQVTAALQQTLNQWLQEQ 209


>gi|262166120|ref|ZP_06033857.1| thymidylate kinase [Vibrio mimicus VM223]
 gi|262025836|gb|EEY44504.1| thymidylate kinase [Vibrio mimicus VM223]
          Length = 212

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   L +   + +  TREPGGT  AE  R ++     
Sbjct: 1   MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTALAEKLRALVKEDHP 59

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIASSTMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ DV   E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDVSFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A +  +   ++D+A S + V+ +I
Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDI 198


>gi|73748588|ref|YP_307827.1| thymidylate kinase [Dehalococcoides sp. CBDB1]
 gi|289432614|ref|YP_003462487.1| thymidylate kinase [Dehalococcoides sp. GT]
 gi|123619641|sp|Q3ZXD8|KTHY_DEHSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73660304|emb|CAI82911.1| thymidylate kinase [Dehalococcoides sp. CBDB1]
 gi|288946334|gb|ADC74031.1| thymidylate kinase [Dehalococcoides sp. GT]
          Length = 208

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 13/193 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++      +T EPGG+ + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121
             E ++F A+R   ++NVI+PAL +GKI++CDR+ DS+ AYQG     + L LD+++   
Sbjct: 63  LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQG---YGRGLDLDTVKCVN 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++   ++PD TI LD+     L R       +     D FE ++   H++ R  F  I 
Sbjct: 120 SLASGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIY 172

Query: 182 RNQPDRCHIVDSA 194
             +PDR   +D++
Sbjct: 173 ATEPDRFLKLDAS 185


>gi|159040886|ref|YP_001540138.1| dTMP kinase [Caldivirga maquilingensis IC-167]
 gi|254808282|sp|A8MB58|KTHY_CALMQ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|157919721|gb|ABW01148.1| dTMP kinase [Caldivirga maquilingensis IC-167]
          Length = 205

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 112/206 (54%), Gaps = 18/206 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+  EGI+G GK+T I L    L+R+ Y V+ T EP  +P     R  +L   + E   
Sbjct: 3   IFVDVEGIDGVGKSTVIRLTADELRRRGYLVYTTSEPSDSPIGLFIRRSILESNL-EVEP 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A++FAA R+ H   VI+P + EG I++ +R+++SS AYQG    SQ + ++ + E++
Sbjct: 62  MALALLFAADRVIHYNRVIKPKVKEGYIVITERYIESSVAYQG----SQGVPVEWIIEVN 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA--R 182
                PD  I+L+ P++    R+ NR        L+YFER    +    ++++L  A  R
Sbjct: 118 SMVAEPDLVIVLNAPLNTVASRLSNR------GMLEYFERNTDFLRSV-QEVYLRRARER 170

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N P    ++D++    +V  ++L ++
Sbjct: 171 NYP----VIDASRVINNVVNDVLTLI 192


>gi|258625441|ref|ZP_05720334.1| thymidylate kinase [Vibrio mimicus VM603]
 gi|258582245|gb|EEW07101.1| thymidylate kinase [Vibrio mimicus VM603]
          Length = 212

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   L +   D +  TREPGGT  AE  R ++     
Sbjct: 1   MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D    E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDTSFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A +  +   ++D+A S + V+ +I
Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDI 198


>gi|238920255|ref|YP_002933770.1| thymidylate kinase [Edwardsiella ictaluri 93-146]
 gi|259494269|sp|C5B8G5|KTHY_EDWI9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238869824|gb|ACR69535.1| thymidylate kinase, putative [Edwardsiella ictaluri 93-146]
          Length = 213

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 101/180 (56%), Gaps = 12/180 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT   ++   L+R    +V  TREPGGTP AE  R  L+  GVD    
Sbjct: 5   FIVIEGLEGAGKTTARDVVVDELRRHGIPEVVFTREPGGTPLAEHLR-TLVKEGVDGETL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
              AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQ G R    HL + +L+
Sbjct: 64  TDRAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHL-MQTLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+P   GL+R ++R        LD  ER+ +   E+ R  +L +A
Sbjct: 123 DTVLGDFKPDLTLYLDIPPQQGLERARSR------GELDRIERESLAFFERTRARYLALA 176


>gi|71893607|ref|YP_279053.1| thymidylate kinase [Mycoplasma hyopneumoniae J]
          Length = 213

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 11/169 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    ++  T EPGG    EA   R  LLS   +
Sbjct: 3   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLSKN-N 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 62  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 121

Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164
             +  +   PD TI LD+ +      +G+ R  NR  L E+  ++++E+
Sbjct: 122 NSLISENTFPDLTIFLDIKISKAFERMGIFRDHNRDRL-ENRGVEFYEK 169


>gi|310767311|gb|ADP12261.1| thymidylate kinase [Erwinia sp. Ejp617]
          Length = 210

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 14/219 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R  L+  G+
Sbjct: 1   MNSK-FIVIEGLEGAGKTTARDAIVSELQRHGINDIVFTREPGGTPLAEKLRD-LIKQGI 58

Query: 60  D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +       AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +
Sbjct: 59  EGERITDSAELLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSLAYQGGGRGMNSDLM 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R+ +
Sbjct: 119 NCLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERY 172

Query: 178 LDIARNQPDRC-HIVDSAHSFQSVATNILNIVWELVQKR 215
           L +A    D C   +D+    + V   +   + + +Q++
Sbjct: 173 LALA--SADSCIKTIDATRPLEQVTAALQQTLNQWLQEQ 209


>gi|157370153|ref|YP_001478142.1| thymidylate kinase [Serratia proteamaculans 568]
 gi|166987708|sp|A8GD24|KTHY_SERP5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157321917|gb|ABV41014.1| dTMP kinase [Serratia proteamaculans 568]
          Length = 212

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 11/213 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63
           F+  EG+EGAGKTT    +   L+     D+  TREPGGTP AE  R  L   GV+ E  
Sbjct: 5   FVVIEGLEGAGKTTARDTVVDVLREHGINDIAFTREPGGTPLAEKLRD-LFKRGVEGELP 63

Query: 64  A-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + SL++
Sbjct: 64  TIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMASLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + E  PD T+ LDLP  +GL+R + R        LD  E++ +   E+ R  + ++A 
Sbjct: 124 TVLGEFRPDLTLYLDLPPIVGLQRARAR------GELDRIEQEALPFFERTRARYRELA- 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            Q      VD++ S   V   I   V + +Q++
Sbjct: 177 AQDASIITVDASQSLDQVTAAIRRCVSQWLQQQ 209


>gi|116071493|ref|ZP_01468761.1| Thymidylate kinase [Synechococcus sp. BL107]
 gi|116065116|gb|EAU70874.1| Thymidylate kinase [Synechococcus sp. BL107]
          Length = 209

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 6/150 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
           +G FI  +GI+G GK+T I  L ++L           +  TREPGGTP  ++ R +LL  
Sbjct: 2   TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTARLVCTREPGGTPLGQSIRELLLHT 61

Query: 58  GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             D+     AE +++AA R  HV++VIRPAL+ G  +L DRF  S+ AYQG         
Sbjct: 62  EADQVPSVTAELLLYAADRAQHVDSVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRPL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +  L+ I+   + PD T+ L +PV++ L+R
Sbjct: 122 ITRLESIATTGLEPDLTVWLMVPVEVSLQR 151


>gi|293396570|ref|ZP_06640846.1| dTMP kinase [Serratia odorifera DSM 4582]
 gi|291420834|gb|EFE94087.1| dTMP kinase [Serratia odorifera DSM 4582]
          Length = 212

 Score =  102 bits (255), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  F+  EG+EGAGKTT    +   L++    D+  TREPGGTP AE  R +      
Sbjct: 1   MNSK-FVVIEGLEGAGKTTARDTVVDVLRQHGINDIVFTREPGGTPLAEKLRDLFKRGYQ 59

Query: 60  DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E    +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQRLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           SL++  + +  PD T+ LDLP  +GL+R Q R +L   E   L +FER
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPLVGLQRAQARGALDRIEQEALPFFER 167


>gi|312134417|ref|YP_004001755.1| thymidylate kinase [Caldicellulosiruptor owensensis OL]
 gi|311774468|gb|ADQ03955.1| thymidylate kinase [Caldicellulosiruptor owensensis OL]
          Length = 209

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 1/148 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLFKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++ AA R +HV+NV+ PA+ EG I+LCDR++ SS  YQG         +  L
Sbjct: 61  MDGL-TEALLLAADRNEHVKNVLIPAMDEGYIVLCDRYILSSVVYQGIVRGVGIENILKL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ 148
             I    + PD  I+L L  +I L+R++
Sbjct: 120 NSIFEDRIKPDLYIVLTLDPEIALQRIK 147


>gi|54020350|ref|YP_115634.1| thymidylate kinase [Mycoplasma hyopneumoniae 232]
 gi|59798155|sp|Q601T1|KTHY_MYCH2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221830|sp|Q4AA79|KTHY_MYCHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53987523|gb|AAV27724.1| thymidylate kinase [Mycoplasma hyopneumoniae 232]
 gi|144227537|gb|AAZ44342.2| thymidylate kinase [Mycoplasma hyopneumoniae J]
          Length = 211

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 11/169 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    ++  T EPGG    EA   R  LLS   +
Sbjct: 1   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLSKN-N 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 60  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119

Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164
             +  +   PD TI LD+ +      +G+ R  NR  L E+  ++++E+
Sbjct: 120 NSLISENTFPDLTIFLDIKISKAFERMGIFRDHNRDRL-ENRGVEFYEK 167


>gi|25008682|sp|Q8K9J3|KTHY_BUCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 212

 Score =  102 bits (254), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 8/175 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGKT     ++R L+  N  +V + R+PG TP AE  R ++ +   +++F 
Sbjct: 6   FIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTYIEDFE 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++  AAR+  V+ +I+PAL +G  ++ DR   SS AYQG     +   ++ L+ +
Sbjct: 66  KETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLINKLKYL 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +Q+ +PD TI LD+  +IGLKR   R        LD  E + +   +K R  +L
Sbjct: 126 FLQDFIPDLTIYLDVYPEIGLKRASKRNH------LDRIEHRSLTFFKKTRASYL 174


>gi|87310761|ref|ZP_01092888.1| thymidylate kinase [Blastopirellula marina DSM 3645]
 gi|87286518|gb|EAQ78425.1| thymidylate kinase [Blastopirellula marina DSM 3645]
          Length = 205

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 15/214 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F  F+G++G GK+T  +L   +L+ +   V   R+PG TP  E  R +LL     E   
Sbjct: 1   MFFVFDGLDGVGKSTQQTLFTAWLEMQGAKVVSCRDPGSTPLGERLRSILLDKSDLEIAP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E +++  AR   V   IRPAL  G  ++ DR+L ++ AYQG       + +D+++ + 
Sbjct: 61  RSEMLLYMTARAQLVAETIRPALEAGAAVVSDRYLLANIAYQG---YGGGVDVDTIRNVG 117

Query: 125 VQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     V+PD T +LDLP    L R+       ES  ++YF        E+ R+ FL  A
Sbjct: 118 LAATDGVLPDATFLLDLPTKAALGRLNRALDRVESRGIEYF--------EQVREGFLAEA 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + + +  HI+D++   + +   I  I   ++++R
Sbjct: 170 K-KFENVHIIDASRKVEEIQAEIRRIALTVLERR 202


>gi|294508726|ref|YP_003572785.1| Thymidylate kinase [Salinibacter ruber M8]
 gi|294345054|emb|CBH25832.1| Thymidylate kinase [Salinibacter ruber M8]
          Length = 221

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 6/209 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L ++FEGI+G+GK+T    L   LQ + ++  + REPGGT  +E  R VLL   ++    
Sbjct: 2   LLLTFEGIDGSGKSTQAHRLNEHLQERGHETLLVREPGGTELSEQVRSVLLEPTLN-VHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
            AE ++F+AAR   V   IRPAL  G+I++CDRF DS+ AYQG  R+ +   +L S    
Sbjct: 61  MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++PD T +++L  +      + R +  + A  D  E +D   + +    +  +A  
Sbjct: 121 VTDGLVPDRTYLVELDPET----ARARRTEGDDAAGDRMEAEDEAFYHRVAAAYDTLADE 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R H +D   S +++   I   V  L+
Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205


>gi|21672617|ref|NP_660684.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|21623249|gb|AAM67895.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 213

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 8/175 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGKT     ++R L+  N  +V + R+PG TP AE  R ++ +   +++F 
Sbjct: 7   FIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTYIEDFE 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++  AAR+  V+ +I+PAL +G  ++ DR   SS AYQG     +   ++ L+ +
Sbjct: 67  KETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLINKLKYL 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +Q+ +PD TI LD+  +IGLKR   R        LD  E + +   +K R  +L
Sbjct: 127 FLQDFIPDLTIYLDVYPEIGLKRASKRNH------LDRIEHRSLTFFKKTRASYL 175


>gi|284931760|gb|ADC31698.1| Thymidylate kinase [Mycoplasma gallisepticum str. F]
          Length = 210

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 118/217 (54%), Gaps = 16/217 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR----KNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G+FI  EG++G+GK+   S LKR +       +  +  +REPGG   +EA R +++ 
Sbjct: 1   MKKGVFIVIEGVDGSGKS---SFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMK 57

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +     EA++F A+R +H++  I PAL E KI++CDRF+ SS+ YQG   ++ +  
Sbjct: 58  LSNSD--PLTEALLFCASRNEHLKKKILPALNENKIVICDRFVVSSWIYQGLIKNAGYEK 115

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  + E     + PD TI+ D+  +I  KR+  R ++     LD + ++ +   +K R  
Sbjct: 116 VKKINECVTDGLEPDLTILFDVDPEIAAKRISERSTMNH---LDTYTKERI---DKIRNA 169

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +L+  ++   +  I++++    ++   ++NI+   V+
Sbjct: 170 YLERLKDNK-KAKIINASLDLDTIYDQVVNIITLFVK 205


>gi|90406894|ref|ZP_01215085.1| thymidylate kinase [Psychromonas sp. CNPT3]
 gi|90311936|gb|EAS40030.1| thymidylate kinase [Psychromonas sp. CNPT3]
          Length = 218

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 10/179 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVL-LSCGVDE 61
           FI  EG+EGAGKTT I  +  +L  +      +  TREPGGT   E  R ++ +    + 
Sbjct: 11  FIVIEGLEGAGKTTAIRYIGNWLAEQGVPTSKMTYTREPGGTKLGEYMRDIIKMDLNDES 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  A+R+  VE VI+PAL +G I++ DR   SS AYQG        F+ SL+
Sbjct: 71  LDDKAELLLMYASRVQLVEAVIKPALAQGHIVIGDRHNYSSLAYQGGGRGLDMHFIHSLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++S+ +   D T+ LD+   +GL+R + R        LD  ER  +   E+ RQ+FL++
Sbjct: 131 QLSLGDFKADFTLYLDIDPALGLQRARGR------GELDRIERLAIDFFERTRQVFLNL 183


>gi|291066996|gb|ADD74112.1| dTMP kinase [Rickettsia felis]
          Length = 227

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 22/176 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++G+GK+T   +LK +L  ++  V  TREPGGT  AE  R +L+     +  
Sbjct: 10  GRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVH---RDLL 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
             +E +   AAR DH+   I PA+  G  ++CDRF+DS+  YQG E DS   L   SL +
Sbjct: 67  PMSELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVY-SLHK 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--------------NRYSLRESACLDYFER 164
             +  +MPD T  +D+   + ++RV+              NR+ +++   LDY+++
Sbjct: 126 KLMPSIMPDITFFIDIEPVLAMERVKVRNGSDYSSSNLRNNRFDIKD---LDYYKK 178


>gi|67459806|ref|YP_247429.1| thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|67459875|ref|YP_247497.1| thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|67005339|gb|AAY62264.1| Thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|67005408|gb|AAY62332.1| Thymidylate kinase [Rickettsia felis URRWXCal2]
          Length = 227

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 22/176 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++G+GK+T   +LK +L  ++  V  TREPGGT  AE  R +L+     +  
Sbjct: 10  GRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVH---RDLL 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
             +E +   AAR DH+   I PA+  G  ++CDRF+DS+  YQG E DS   L   SL +
Sbjct: 67  PMSELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVY-SLHK 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--------------NRYSLRESACLDYFER 164
             +  +MPD T  +D+   + ++RV+              NR+ +++   LDY+++
Sbjct: 126 KLMPSIMPDITFFIDIEPVLAMERVKVRNGSNYSSSNLRNNRFDIKD---LDYYKK 178


>gi|261415858|ref|YP_003249541.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261372314|gb|ACX75059.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327609|gb|ADL26810.1| dTMP kinase [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 210

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 6/204 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA- 64
           F S EGI+G+GK+T I +L R L+ + + V   REPGG   +E  R +LL        A 
Sbjct: 7   FFSLEGIDGSGKSTQIDMLVRVLESEGHKVVRLREPGGAKISERIRELLLDPAFKGIMAD 66

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E +++ AAR   +  +I+PAL  G I++ DRF  S++AYQG         +  L E++
Sbjct: 67  DTELLLYNAARAQVIHEIIKPALDAGNIVIADRFAWSTFAYQGYARGLGADKVQRLTELT 126

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                P+ T++LDL V+   KR+  R         D  E +     E+ R+ +L   R+ 
Sbjct: 127 CGGCFPELTVVLDLTVEASRKRMAIR-----GGAPDRLESEKAEFFERVREGYLAAGRDY 181

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            D   +V++  +   V  ++L+++
Sbjct: 182 SDCVSVVNADRTPDEVHQDVLSLI 205


>gi|313835739|gb|EFS73453.1| thymidylate kinase [Propionibacterium acnes HL037PA2]
 gi|314928412|gb|EFS92243.1| thymidylate kinase [Propionibacterium acnes HL044PA1]
 gi|314970109|gb|EFT14207.1| thymidylate kinase [Propionibacterium acnes HL037PA3]
          Length = 215

 Score =  102 bits (253), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+  EG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 13  GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EG++++CDR++DS+ AYQG         +  L  
Sbjct: 73  CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FL +A 
Sbjct: 133 WATVGLVPDVTVLLDVDPCEGTAKI---------AAKDRLEAAGDEFHLRVRQHFLSLAA 183

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  + + ++  I + V  L+ +
Sbjct: 184 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 215


>gi|328474618|gb|EGF45423.1| thymidylate kinase [Vibrio parahaemolyticus 10329]
          Length = 209

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I ++L    Q    ++  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPCIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    ++++  S + V+ +I + + E + ++
Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209


>gi|269967358|ref|ZP_06181419.1| thymidylate kinase [Vibrio alginolyticus 40B]
 gi|269828066|gb|EEZ82339.1| thymidylate kinase [Vibrio alginolyticus 40B]
          Length = 210

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I  +   L+     D+  TREPGGTP AE  R ++      +E  
Sbjct: 6   FIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHEGEELK 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 66  DMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 126 TLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    I+++  + + V+ +I + + E + ++
Sbjct: 180 DPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 210


>gi|261253405|ref|ZP_05945978.1| thymidylate kinase [Vibrio orientalis CIP 102891]
 gi|260936796|gb|EEX92785.1| thymidylate kinase [Vibrio orientalis CIP 102891]
          Length = 209

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M +  FI  EG+EGAGK++ I+ +   L++   D +  TREPGGT  AE  R ++     
Sbjct: 1   MTNAKFIVIEGLEGAGKSSAINAVLETLKQSGVDAITNTREPGGTALAEKLRTLVKQEHE 60

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E      E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 61  GEQLQDMTELLLMYAARVQLVENVIKPALTSGTWVVGDRHDMSSQAYQGGGRKIPAATML 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD TI LD+   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 ALKQTTLGDFKPDLTIYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +A  Q +   +V++      VA +I N++
Sbjct: 175 QLA-EQDESVVVVNAEQDIDKVAADISNVL 203


>gi|78183894|ref|YP_376328.1| thymidylate kinase [Synechococcus sp. CC9902]
 gi|123582163|sp|Q3B043|KTHY_SYNS9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78168188|gb|ABB25285.1| thymidylate kinase [Synechococcus sp. CC9902]
          Length = 209

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 83/150 (55%), Gaps = 6/150 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
           +G FI  +GI+G GK+T I  L ++L           +  TREPGGTP  ++ R +LL  
Sbjct: 2   TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTAQLICTREPGGTPLGQSIRELLLHT 61

Query: 58  GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             D+     AE +++AA R  HV+ VIRPAL+ G  +L DRF  S+ AYQG         
Sbjct: 62  EADQVPSVTAELLLYAADRAQHVDTVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRQL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +  L+ I+   + PD T  L +PV++ L+R
Sbjct: 122 ITRLESIATTGLEPDLTAWLMVPVEVSLQR 151


>gi|328906772|gb|EGG26544.1| dTMP kinase [Propionibacterium sp. P08]
          Length = 209

 Score =  101 bits (252), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+  EG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 7   GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EG++++CDR++DS+ AYQG         +  L  
Sbjct: 67  CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++         A  D  E      H + RQ FL +A 
Sbjct: 127 WATVGLVPDVTVLLDVDPCEGTAKI---------AAKDRLEAAGDEFHLRVRQHFLSLAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  + + ++  I + V  L+ +
Sbjct: 178 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 209


>gi|260776328|ref|ZP_05885223.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607551|gb|EEX33816.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 209

 Score =  101 bits (252), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 17/210 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGK+T I+ +   L++   + +  TREPGGT  AE  R ++     
Sbjct: 1   MTQAKFIVIEGLEGAGKSTAINAVLETLKQAGIEQIKNTREPGGTALAEQLRTLVKQ--- 57

Query: 60  DEFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQH 114
           D  G E     E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQ G R  SQH
Sbjct: 58  DHEGEELQDMTELLLMYAARVQLVENVIKPALNSGTWVVGDRHDMSSQAYQGGGRQISQH 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             + +L++ ++ +  PD TI LDL   IGL+R + R        LD  E+ D+   ++ R
Sbjct: 118 T-MTALKQTTLGDFKPDLTIYLDLDPRIGLERARGR------GELDRIEKMDMSFFDRTR 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
             +L++A+       ++++  + + VA +I
Sbjct: 171 ARYLELAQCDSS-VVVINAEQTIELVAQDI 199


>gi|258621219|ref|ZP_05716253.1| thymidylate kinase [Vibrio mimicus VM573]
 gi|258586607|gb|EEW11322.1| thymidylate kinase [Vibrio mimicus VM573]
          Length = 212

 Score =  101 bits (252), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 9/205 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG+EGAGK+T I ++   L +   + +  TREPGGT  AE  R ++      E   
Sbjct: 5   FIVIEGLEGAGKSTAIQVVVETLHQHGINQITRTREPGGTVLAEKLRALVKEEHPGEVLQ 64

Query: 65  E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMKNLKQT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ +L++A +
Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYLELAES 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             +   ++D+A S + V+ +I  ++
Sbjct: 179 D-ESVVLIDAAQSIEQVSKDIRTVL 202


>gi|91228553|ref|ZP_01262473.1| thymidylate kinase [Vibrio alginolyticus 12G01]
 gi|91187877|gb|EAS74189.1| thymidylate kinase [Vibrio alginolyticus 12G01]
          Length = 209

 Score =  101 bits (252), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I  +   L+     D+  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    I+++  + + V+ +I + + E + ++
Sbjct: 179 DPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 209


>gi|85059043|ref|YP_454745.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans']
 gi|123519602|sp|Q2NU35|KTHY_SODGM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|84779563|dbj|BAE74340.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans']
          Length = 213

 Score =  101 bits (252), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 12/207 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EG+GKT+ I+ +   L+ +   DV  TREPGGTP AEA R  L+  GV
Sbjct: 1   MNSK-FIVIEGLEGSGKTSAIAQVVDVLREQGIRDVVFTREPGGTPLAEALR-TLIKDGV 58

Query: 60  DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            E      AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         L
Sbjct: 59  GEEPVTDRAELLMLYAARVQLVEGVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDARLL 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +L++  + +  PD T+ LD+P  +GL R + R        LD  E + +   ++ R  +
Sbjct: 119 QTLRDAVLGDFRPDLTLYLDIPPALGLARARAR------GELDRIEVESLAFFDRTRARY 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             +A    DR   +D++    +V+  +
Sbjct: 173 QALAAAD-DRMVTLDASQPLAAVSAAL 198


>gi|241667797|ref|ZP_04755375.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876341|ref|ZP_05249051.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842362|gb|EET20776.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 204

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 3/162 (1%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T I  +K++L  K+     TREPGGT  AE  R ++L    D E   
Sbjct: 4   FIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIHP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG         L+ L E  
Sbjct: 64  DSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGFDKLNVLNETF 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           +++  PD  I LD+   IGL R     S    E A L +F+R
Sbjct: 124 LKDCQPDLIIYLDIDPAIGLARAGKVGSPDRIEKAGLAFFDR 165


>gi|167855936|ref|ZP_02478684.1| thymidylate kinase [Haemophilus parasuis 29755]
 gi|167852930|gb|EDS24196.1| thymidylate kinase [Haemophilus parasuis 29755]
          Length = 208

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGK+    ++   L     +   TREPGGTP AEA R++       E  
Sbjct: 3   GKFIVIEGLEGAGKSNAQRVVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEHT 62

Query: 64  AE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AE ++  AAR   VE VI PAL  GK ++ DR   SS AYQG       L +D +  
Sbjct: 63  TDKAEVLMIYAARTQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGLAEL-VDEVGS 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + + +  PD TI LD+   IGL+R + R        LD  E+ D+    + R+ ++ + +
Sbjct: 122 VILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLVK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  + + V+ +I   V
Sbjct: 176 DNP-KAVLINAEPAIEQVSADIQQAV 200


>gi|242398141|ref|YP_002993565.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
 gi|259494284|sp|C6A0S1|KTHY_THESM RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|242264534|gb|ACS89216.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
          Length = 210

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 18/211 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+FI  EGI+GAGK+T   +L ++ + + Y+V +T+EP  T   +  R ++L  G +   
Sbjct: 2   GIFIVLEGIDGAGKSTQAKMLAKWFENRGYEVVLTKEPTDTAFGKLIRRLVLIGGKEGII 61

Query: 61  ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  EAEA++FAA R +HV+ +I P++  GK+++ DR+  SS AYQ  R     L L
Sbjct: 62  DGARISKEAEALLFAADRAEHVKKLIEPSIKAGKVVISDRYFYSSLAYQWARG----LDL 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L  ++      D  I+LDLPV   + R+  R S+R       F+ K V + +K R+ +
Sbjct: 118 NWLINLNAFAPRADLVILLDLPVKESINRINGR-SIRSE-----FD-KIVELQKKVRKNY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L +A  + +   I+++    + +  +I  ++
Sbjct: 171 LKLAE-KFNEIRIINALAPVEDIHNDITALI 200


>gi|304372905|ref|YP_003856114.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1]
 gi|304309096|gb|ADM21576.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1]
          Length = 215

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 11/149 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60
           +FI+FEGI+G+GK+T I  L  +LQ +    ++ +TREPGG    EA   R++LL     
Sbjct: 1   MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFL 117
           E     E I+FAA+R  H+E +I P+L EGKI++ DRF+DSS AYQ    E D +Q   +
Sbjct: 60  EISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQVFGNEIDINQ---V 116

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           + L +    +  PD T  LD+P+    +R
Sbjct: 117 EQLNDWISNKTQPDLTFWLDVPIQQAFER 145


>gi|83814827|ref|YP_446793.1| thymidylate kinase [Salinibacter ruber DSM 13855]
 gi|83756221|gb|ABC44334.1| thymidylate kinase [Salinibacter ruber DSM 13855]
          Length = 221

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 6/209 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L ++FEGI+G+GK+T    L   LQ + +   + REPGGT  +E  R VLL   ++    
Sbjct: 2   LLLTFEGIDGSGKSTQAHRLNEHLQERGHKTLLVREPGGTELSEQVRSVLLEPALN-VHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123
            AE ++F+AAR   V   IRPAL  G+I++CDRF DS+ AYQG  R+ +   +L S    
Sbjct: 61  MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++PD T +++L  +      + R +    A  D  E +D   + +    +  +A  
Sbjct: 121 VTDGLVPDRTYLVELDPET----ARARRTEGNDAAGDRMEAEDEAFYHRVAAAYDTLADE 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R H +D   S +++   I   V  L+
Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205


>gi|239994633|ref|ZP_04715157.1| thymidylate kinase [Alteromonas macleodii ATCC 27126]
          Length = 216

 Score =  101 bits (252), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 11/207 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGK++ I L+ + L+     V  TREPGGTP AEA R  +     +   
Sbjct: 3   GKFIVVEGLEGAGKSSVIGLIVQALKGAGKRVEQTREPGGTPMAEAIRECVKHDWDETVS 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++  AAR+  + N I P+L  G  ++ DR   SS AYQG         + ++ +I
Sbjct: 63  EETELLLMYAARVQLLTNKILPSLDAGAWVVGDRHDLSSQAYQGGGRGVSGKTMSAISDI 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++   PD T+ LD+   +GL+R + R  L   E A L +FER         R  +L +A
Sbjct: 123 ALKGFKPDLTLYLDVEPAVGLERARGRGELDRIEQAGLAFFERT--------RAKYLSLA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           + Q +   +V +    + V  +++ I+
Sbjct: 175 K-QDESIVVVSAMQPMEKVHQDVIAII 200


>gi|289208432|ref|YP_003460498.1| thymidylate kinase [Thioalkalivibrio sp. K90mix]
 gi|288944063|gb|ADC71762.1| thymidylate kinase [Thioalkalivibrio sp. K90mix]
          Length = 219

 Score =  101 bits (251), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 6/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+  EGIEG+GK+T ++ +   L+    +   TREPGGT   E  R +LL   +     E
Sbjct: 11  FVVLEGIEGSGKSTQLATVVESLRATGIEPECTREPGGTALGERLRGLLLDPDLPGMCPE 70

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR  H+ +VIRPAL  G+ ++ DRF D+S+AYQG         +  L++   
Sbjct: 71  AELLLMFAARAQHLASVIRPALAAGRWVVSDRFTDASFAYQGAGRGLGAERVARLEDWVQ 130

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            ++ PD  ++LD+    GL+R   R         D  ER+ +    + R+ +L+ AR  P
Sbjct: 131 GDLRPDLVLLLDIDPATGLERAVQR------GRRDRIEREALEFFARVREAYLERARAYP 184

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +   ++D   + + VA ++
Sbjct: 185 EHYRVIDGHGTPEQVADSV 203


>gi|262277219|ref|ZP_06055012.1| thymidylate kinase [alpha proteobacterium HIMB114]
 gi|262224322|gb|EEY74781.1| thymidylate kinase [alpha proteobacterium HIMB114]
          Length = 212

 Score =  101 bits (251), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 8/206 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  I+FEGIEG+GK+T I+ + +FL+++      TREPGGT  AE  R +++    +
Sbjct: 3   IEKGNLITFEGIEGSGKSTQINEVYKFLKKRKIKCIKTREPGGTRLAEKIRKIIIKDLKN 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++  AAR +H    I+  + +G ++LCDR++DS+YAYQ          ++ L
Sbjct: 63  NEDNLTELLLLFAARSNHFL-KIKKLIKKGYLVLCDRYIDSTYAYQHYEQGQDIKLINFL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q +  ++  P  T  +D+PV     RV+ R        LD F++       K R+ F+++
Sbjct: 122 QNLISKKSFPKITFFIDIPVKTSKSRVKGR------GRLDRFDKYGEKKLNKLRKSFINL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
            + + +R  ++D   + + +   I+N
Sbjct: 176 KK-KHNRIIMIDGTKNKKDITIQIVN 200


>gi|113955289|ref|YP_731781.1| thymidylate kinase [Synechococcus sp. CC9311]
 gi|123327571|sp|Q0I6Z1|KTHY_SYNS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|113882640|gb|ABI47598.1| thymidylate kinase [Synechococcus sp. CC9311]
          Length = 212

 Score =  101 bits (251), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 7/168 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58
           G  +  EGI+G GKTT +  L  +L +         + VTREPGGT    + R +LL   
Sbjct: 2   GRLLVLEGIDGCGKTTQLQQLSSWLPKSGLMPDESRLVVTREPGGTALGTSLRQLLLHPP 61

Query: 59  VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            D + G  AE +++AA R  HV+ VI+PAL  G  +L DRF  S+ AYQG         +
Sbjct: 62  QDADPGPTAELLLYAADRAQHVDRVIQPALERGDWVLSDRFTGSTMAYQGYGRGLNRELI 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
             L+ I+ + + PD T+ LD+P+ + ++R  +R   R E+  L + ER
Sbjct: 122 TDLERIATRGLTPDMTVWLDIPLALSVQRRGSREEDRIEAEGLAFLER 169


>gi|91205052|ref|YP_537407.1| thymidylate kinase [Rickettsia bellii RML369-C]
 gi|122425994|sp|Q1RJZ6|KTHY_RICBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91068596|gb|ABE04318.1| Thymidylate kinase [Rickettsia bellii RML369-C]
          Length = 206

 Score =  101 bits (251), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 3/150 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+   + 
Sbjct: 4   LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVHTDLL 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 +A+   AAR DH+   I PAL  G I++CDRF+DS+  YQG    +    + +L
Sbjct: 64  PMSELLQAM---AARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            +  +  +MPD T  +D+   I ++RV +R
Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERVNSR 150


>gi|330431479|gb|AEC16538.1| thymidylate kinase [Gallibacterium anatis UMN179]
          Length = 210

 Score =  101 bits (251), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGKT+    +   L+    +  V TREPGGTP AE  R ++     DE   
Sbjct: 5   FIVLEGLEGAGKTSARDTVVAVLKELGINEFVFTREPGGTPLAEKLRQLIKQGEGDEVIT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L +L++ 
Sbjct: 65  DKAELLMLYAARVQLVENVIKPALKQGKWVIGDRHDLSSQAYQGGGRGLDINLLMTLKQA 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + +  PD T+ LD+  +IGL R ++R        LD  E++ +   ++ RQ +L +   
Sbjct: 125 VLGDFTPDLTLYLDVDPEIGLARARSR------GELDRIEQQQIDFFQRTRQRYLQLV-E 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             ++   +D+   F  V   +   + +  Q++
Sbjct: 178 ADEKSVTIDANLDFPEVNKQLRQAITQWFQRQ 209


>gi|294660635|ref|NP_853503.2| thymidylate kinase [Mycoplasma gallisepticum str. R(low)]
 gi|298286819|sp|Q7NAD7|KTHY_MYCGA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|284812298|gb|AAP57071.2| Thymidylate kinase [Mycoplasma gallisepticum str. R(low)]
 gi|284931003|gb|ADC30942.1| Thymidylate kinase [Mycoplasma gallisepticum str. R(high)]
          Length = 210

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 16/217 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR----KNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G+FI  EG++G+GK+   S LKR +       +  +  +REPGG   +EA R +++ 
Sbjct: 1   MKKGVFIVIEGVDGSGKS---SFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMK 57

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +     EA++F A+R +H++  I PAL E KI +CDRF+ SS+ YQG   ++ +  
Sbjct: 58  LSNSD--PLTEALLFCASRNEHLKKKILPALNENKIAICDRFVVSSWIYQGLIKNAGYEK 115

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  + E     + PD TI+ D+  +I  KR+  R ++     LD + ++ +    K R  
Sbjct: 116 VKKINEYVTDGLEPDLTILFDVDPEIAAKRISERSTMNH---LDAYTKERI---NKIRNA 169

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +L+  ++   +  I++++    +V   ++NI+   V+
Sbjct: 170 YLERLKDNK-KAKIINASLDLDTVYDQVVNIITLFVK 205


>gi|219871835|ref|YP_002476210.1| thymidylate kinase [Haemophilus parasuis SH0165]
 gi|254808297|sp|B8F7G0|KTHY_HAEPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219692039|gb|ACL33262.1| thymidylate kinase [Haemophilus parasuis SH0165]
          Length = 208

 Score =  101 bits (251), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 9/206 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG+EGAGK+    ++   L     +   TREPGGTP AEA R++       E  
Sbjct: 3   GKFIVIEGLEGAGKSNAQRIVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEHT 62

Query: 64  AE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AE ++  AAR+  VE VI PAL  GK ++ DR   SS AYQG       L +D +  
Sbjct: 63  TDKAEVLMIYAARIQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGLAEL-VDEVGS 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI LD+   IGL+R + R        LD  E+ D+    + R+ ++ + +
Sbjct: 122 AILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLVK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           + P +  ++++  + + V+ +I   V
Sbjct: 176 DNP-KAVLINAEPAIEQVSADIQQAV 200


>gi|323499364|ref|ZP_08104340.1| thymidylate kinase [Vibrio sinaloensis DSM 21326]
 gi|323315549|gb|EGA68584.1| thymidylate kinase [Vibrio sinaloensis DSM 21326]
          Length = 210

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FI  EG+EGAGK+T I  +   L     + +  TREPGGT  AE  R ++     
Sbjct: 1   MSQAKFIVIEGLEGAGKSTAIKAVLDTLNLAGVESIKNTREPGGTVLAETLRTLVKQEHE 60

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VENVI+PAL +G+ ++ DR   SS AYQG         + 
Sbjct: 61  GEVLQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIAKETMS 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 ALKQTTLGSFKPDLTLYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A N  D   I+++    + VA +I   +   ++K+
Sbjct: 175 ELA-NGDDSVLIINAEQPIEKVAADIKTTLTHWLEKQ 210


>gi|114563411|ref|YP_750924.1| dTMP kinase [Shewanella frigidimarina NCIMB 400]
 gi|122299553|sp|Q081H9|KTHY_SHEFN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|114334704|gb|ABI72086.1| thymidylate kinase [Shewanella frigidimarina NCIMB 400]
          Length = 215

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 14/205 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDE 61
           G FI  EG+EGAGK++ I+L+   +++      V TREPGGTP AE  R ++ ++   D 
Sbjct: 6   GKFIVIEGLEGAGKSSAIALVNDIIKQHIGQAPVCTREPGGTPLAEKMRDLVKIADETDP 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EAE ++  AAR   + NVI+PAL  G+ +L DR   SS AYQG       L + ++ 
Sbjct: 66  LCDEAECLLIYAARTQLIANVIKPALSVGQWVLGDRHNLSSLAYQGGGRGLMPL-VKAVS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179
           +  ++   PD T+ LD+   +GL R  +R  L   E   +D+FER         R+ +L 
Sbjct: 125 DACLRGFKPDLTLYLDIDPTLGLSRAASRGELDRIEQQAIDFFERA--------RRTYLQ 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A ++ D   ++D++ S + V  +I
Sbjct: 177 LA-HEDDSIVVIDASQSMEQVHNDI 200


>gi|330829693|ref|YP_004392645.1| Thymidylate kinase [Aeromonas veronii B565]
 gi|328804829|gb|AEB50028.1| Thymidylate kinase [Aeromonas veronii B565]
          Length = 213

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 8/200 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG+EGAGK++ +  +  +LQR   + +  TREPGGTP AE  R ++     +    
Sbjct: 4   FIVIEGLEGAGKSSAVRYVTDYLQRHGINRIECTREPGGTPLAERMRAIVKEVHDERLTI 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE ++  A+R+  VE  I+PAL +G  ++ DR   SS AYQG         + ++++  
Sbjct: 64  EAELLLMYASRVQLVETRIKPALADGVWVVGDRHDLSSQAYQGGGRGIDAQLIGAIKQAV 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    PD T+ LD+   +GL+R ++R        LD  E + +   E+ R  +L++A  +
Sbjct: 124 LGNFKPDLTLYLDIDPALGLQRARHR------GELDRIELEQLSFFERTRTRYLELA-AK 176

Query: 185 PDRCHIVDSAHSFQSVATNI 204
            D   ++D+A + + V   I
Sbjct: 177 DDSIVVIDAAQTPEQVKAAI 196


>gi|157827624|ref|YP_001496688.1| thymidylate kinase [Rickettsia bellii OSU 85-389]
 gi|166223110|sp|A8GXQ1|KTHY_RICB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157802928|gb|ABV79651.1| thymidylate kinase [Rickettsia bellii OSU 85-389]
          Length = 206

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 3/150 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+   + 
Sbjct: 4   LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVHTDLL 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 +A+   AAR DH+   I PAL  G I++CDRF+DS+  YQG    +    + +L
Sbjct: 64  PMSELLQAM---AARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            +  +  +MPD T  +D+   I ++R+ +R
Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERINSR 150


>gi|330723507|gb|AEC45877.1| thymidylate kinase [Mycoplasma hyorhinis MCLD]
          Length = 215

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 5/146 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60
           +FI+FEGI+G+GK+T I  L  +LQ +    ++ +TREPGG    EA   R++LL     
Sbjct: 1   MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E I+FAA+R  H+E +I P+L EGKI++ DRF+DSS AYQ   +      ++ L
Sbjct: 60  EISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQAFGNKIDINQVEQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146
            +    +  PD T  LD+P+    +R
Sbjct: 120 NDWISNKTQPDLTFWLDVPIQQAFER 145


>gi|157826103|ref|YP_001493823.1| thymidylate kinase [Rickettsia akari str. Hartford]
 gi|166223109|sp|A8GPJ0|KTHY_RICAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157800061|gb|ABV75315.1| thymidylate kinase [Rickettsia akari str. Hartford]
          Length = 203

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 104/194 (53%), Gaps = 9/194 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG +G GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGDGIGKSTQAQMLYEYLKSQNTHVILTREVGGTAVAEKMRAILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +E +   AAR DH+   I PAL +G +++CDRF+DS+  YQG    +    + +L
Sbjct: 61  SLLPMSELLQAMAARYDHMARKIIPALQDGHVVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I +  +MP+ T  +D+  D  ++RV +R         + F+ + +  ++K    F  +
Sbjct: 121 HKILMPSLMPEITFFIDVEPDTAIERVNSR------NMSNKFDIRGIDFYKKVYDCFKAL 174

Query: 181 ARNQPDRCHIVDSA 194
           +   P+R   + ++
Sbjct: 175 SNRFPERIKTIKAS 188


>gi|114775378|ref|ZP_01450946.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1]
 gi|114553489|gb|EAU55870.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1]
          Length = 211

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 5/207 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+FEG +G+GK+T + L   +L      +  T EPG T      R +LLS G D   
Sbjct: 2   GKLITFEGGDGSGKSTQLRLTADWLTSIGKRIITTFEPGDTQLGAKIRQLLLS-GEDVPV 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121
            E E ++F A R  HV  V++PAL  G  +LCDR+ DS+ AYQ    +  +    L  + 
Sbjct: 61  PECEMLLFLADRAQHVREVVQPALQRGDWVLCDRYSDSTLAYQLAARKLGAADELLRQML 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   V PD T+  DLPV   L+R++ R    E +     + + +  H++    F   A
Sbjct: 121 TFAECGVTPDLTLWFDLPVSAALERMRQRQQAGEKST--RLDDEALSFHQRVTAAFASQA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P R   VD+    +SV   + +I+
Sbjct: 179 EAEPGRMMRVDAVGDIKSVEQQVHHII 205


>gi|312880075|ref|ZP_07739875.1| thymidylate kinase [Aminomonas paucivorans DSM 12260]
 gi|310783366|gb|EFQ23764.1| thymidylate kinase [Aminomonas paucivorans DSM 12260]
          Length = 211

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 14/211 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGV 59
             GLF++ EGI+G GK+T    L  +L+ ++    V  TREPGG P     R  +L    
Sbjct: 5   KEGLFLTLEGIDGCGKSTQAGRLASWLRERDPRRPVLWTREPGGWPGGADFRERILRGQW 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +     +E  +F A R +HV   I PAL  G+ +LC+R+ DS+ AYQ      + L L++
Sbjct: 65  EH--PWSEVFLFLADRCEHVLREILPALARGEQVLCERYHDSTLAYQ---SFGRGLPLEA 119

Query: 120 LQEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           L+  S   +  +P  T++LDLPV+  L+R+Q R         D  E +     E+ R+ F
Sbjct: 120 LRRFSRDCRFPLPHRTLLLDLPVEDALRRLQQR-----EGAADRLEGEGRPFLERVRRGF 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L +A  +P+R  +VD+    + V   +   V
Sbjct: 175 LCLAEAEPERYAVVDARGDEEQVFARLCRAV 205


>gi|251771718|gb|EES52293.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum]
          Length = 252

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 12/206 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG++G+GK+T    LK  L   ++   +T+EPGGTPA    R +LL   +    
Sbjct: 39  GCLIVFEGMDGSGKSTQARRLKARLDGLSHPAVLTKEPGGTPAGARLREILLDPAL-PLA 97

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE  +F A R  HV+ ++ P L  G+ +L DR   ++ AYQ          + +L E+
Sbjct: 98  PEAELFLFEADRAMHVKTLLLPELRAGRTVLSDRLSFATVAYQSFGGGLSRELVSTLNEV 157

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR---YSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V+PD T +LDLPV    +R++ R    +  E    DYFER         R+ +L++
Sbjct: 158 ALGGVVPDVTYLLDLPVSEMARRLRERGDGPTRFELLGGDYFERV--------REGYLEL 209

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
           AR    R  ++D+    +++   I  
Sbjct: 210 ARIHRGRTVVLDATRDPETLEGEIFE 235


>gi|292487960|ref|YP_003530837.1| thymidylate kinase [Erwinia amylovora CFBP1430]
 gi|292899179|ref|YP_003538548.1| thymidylate kinase [Erwinia amylovora ATCC 49946]
 gi|291199027|emb|CBJ46138.1| thymidylate kinase [Erwinia amylovora ATCC 49946]
 gi|291553384|emb|CBA20429.1| Thymidylate kinase [Erwinia amylovora CFBP1430]
          Length = 210

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 9/215 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R ++    V E
Sbjct: 2   NGKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMVGE 61

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +  L
Sbjct: 62  RVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMSCL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  + +  P  T+ LD+  ++GL+R + R        LD  E++ +    + R  +L +
Sbjct: 122 KQAVLGDFAPHLTLYLDVTPELGLQRARAR------GELDRIEQESLNFFTRTRDRYLAL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A +   R   VD+      V   +   + + +Q++
Sbjct: 176 A-SADSRIKTVDATQPLAQVTAALQQTLNQWLQEQ 209


>gi|269139439|ref|YP_003296140.1| thymidylate kinase [Edwardsiella tarda EIB202]
 gi|267985100|gb|ACY84929.1| thymidylate kinase [Edwardsiella tarda EIB202]
 gi|304559335|gb|ADM41999.1| Thymidylate kinase [Edwardsiella tarda FL6-60]
          Length = 213

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 108/203 (53%), Gaps = 13/203 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT   ++   L+R    +V  TREPGGTP AE  R  L+  GV+    
Sbjct: 5   FIVIEGLEGAGKTTARDVVVDELRRHGIQEVVFTREPGGTPLAEHLR-TLVKEGVEGETL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
              AE ++  AAR+  +ENVI+PAL  G  ++ DR   SS AYQ G R    HL + +L+
Sbjct: 64  TDRAEVLMLYAARVQLIENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHL-MQTLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+P   GL R ++R        LD  ER+ +   E+ R  +L +A
Sbjct: 123 DTVLGDFKPDLTLYLDIPPQQGLARARSR------GELDRIERESLAFFERTRDRYLALA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
                    +D+A   + V+  I
Sbjct: 177 AADAT-IVTLDAAQPLEQVSAAI 198


>gi|167627244|ref|YP_001677744.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|238687894|sp|B0TWY5|KTHY_FRAP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|167597245|gb|ABZ87243.1| dTMP kinase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 204

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 3/162 (1%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI  EG++GAGK+T I  +K++L  K+     TREPGGT  AE  R ++L    D E   
Sbjct: 4   FIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIHP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG         L+ L E  
Sbjct: 64  DSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGVDKLNVLNETF 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           +++  PD  I LD+   IGL R     S    E A L +F+R
Sbjct: 124 LKDCQPDLIIYLDIDPAIGLARAGKVGSPDRIEKAGLAFFDR 165


>gi|168705271|ref|ZP_02737548.1| thymidylate kinase [Gemmata obscuriglobus UQM 2246]
          Length = 216

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 11/213 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+S +G++G GK+T   LL  +L  +   V    +PGGTP  +  R +LL       G  
Sbjct: 6   FLSLDGLDGTGKSTQCRLLVEWLVAQGVPVTACTDPGGTPLGQELRKLLLFGREHRIGTR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLF-LDSLQE 122
            EA++F A+R   VE VIRPAL  G++++ DRFL ++  YQG     S + L+ + +   
Sbjct: 66  TEALLFMASRAQLVEEVIRPALARGEVVVSDRFLLANVVYQGHAGGLSPEELWQVGTFAT 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              + + PD T++LDLP +I   R        E+   DY ER         R  F     
Sbjct: 126 GGAERLEPDLTLVLDLPPEIAAVRRNREADRMEARGADYAERV--------RAGFRSEVA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            + +R  +VD+  +   V   I   V  L++ R
Sbjct: 178 RRTERLRLVDATANVDGVQKIIRGEVAGLLRGR 210


>gi|149911598|ref|ZP_01900210.1| thymidylate kinase [Moritella sp. PE36]
 gi|149805319|gb|EDM65332.1| thymidylate kinase [Moritella sp. PE36]
          Length = 214

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 4/163 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           F+  EG+EGAGK+T +S +  +L  +   DV  TREPGGT  AE  R ++     +E   
Sbjct: 5   FLVIEGLEGAGKSTAVSTVINWLAEQGITDVITTREPGGTKLAEKMRAIVKDVDTEEPLT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR   VE+VI+PAL +G+ ++ DR   SS AYQG         L++L+++
Sbjct: 65  ESAELMLMYAARAQLVEHVIKPALAKGQWVVGDRHDLSSIAYQGGGRGFDIGVLNTLRQV 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           ++ +  PD T++LD+   +GL+R + R  L   E   L +FER
Sbjct: 125 AIGDFKPDMTLLLDIDPAVGLQRAKVRGELDRIELEQLSFFER 167


>gi|238810242|dbj|BAH70032.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 220

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 16/204 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK------NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +FI+FEG +G+GKTT I+ L   L  K      NY   +TREPGG    EA +   L   
Sbjct: 3   MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNY--VLTREPGGKDIIEAEKIRSLILD 60

Query: 59  VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            D +  + +EA+++  +R  H+E V+ PAL E +++LCDR++DS +AYQG   +    F+
Sbjct: 61  KDSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFV 120

Query: 118 DSLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             L  + + + MPD TI  ++ P +  ++R Q R         D  + +  + H+K  + 
Sbjct: 121 KKLTNLIIDKTMPDITIFFEIKPEESKIRREQIR------IVSDRLDSETELFHQKVYKG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSV 200
           + ++ + + DR  +VD+  S + V
Sbjct: 175 YHELIKKEKDRFIVVDATKSIEEV 198


>gi|318040596|ref|ZP_07972552.1| thymidylate kinase [Synechococcus sp. CB0101]
          Length = 219

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 6/165 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLL-SC 57
           G F+  EGI+G GKTT I  L+ +L R     +   + VTREPGGT    A R +LL   
Sbjct: 5   GRFLVLEGIDGCGKTTQIEHLRHWLPRSGLMPEGAQLMVTREPGGTELGRALRQLLLHPP 64

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G     + AE +++AA R  HV+  I PAL  G  +L DRF  S+ AYQG         +
Sbjct: 65  GAAAPCSTAELLLYAADRAQHVQQQILPALEAGHWVLSDRFSGSTAAYQGYGRGLSLALI 124

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           D L  I+ + + PD T++LD+P++  L+R  +R + R  A  + F
Sbjct: 125 DQLSLIACRGLQPDLTLLLDVPLEESLRRRGHRAADRIEASGEAF 169


>gi|262393774|ref|YP_003285628.1| thymidylate kinase [Vibrio sp. Ex25]
 gi|262337368|gb|ACY51163.1| thymidylate kinase [Vibrio sp. Ex25]
          Length = 209

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I  +   L+    +  V TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    I+++  + + V+ +I + + E + ++
Sbjct: 179 DPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 209


>gi|308190301|ref|YP_003923232.1| dTMP kinase [Mycoplasma fermentans JER]
 gi|319777695|ref|YP_004137346.1| thymidylate kinase [Mycoplasma fermentans M64]
 gi|307625043|gb|ADN69348.1| dTMP kinase [Mycoplasma fermentans JER]
 gi|318038770|gb|ADV34969.1| Thymidylate kinase [Mycoplasma fermentans M64]
          Length = 218

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 16/204 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK------NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +FI+FEG +G+GKTT I+ L   L  K      NY   +TREPGG    EA +   L   
Sbjct: 1   MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNY--VLTREPGGKDIIEAEKIRSLILD 58

Query: 59  VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            D +  + +EA+++  +R  H+E V+ PAL E +++LCDR++DS +AYQG   +    F+
Sbjct: 59  KDSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFV 118

Query: 118 DSLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             L  + + + MPD TI  ++ P +  ++R Q R         D  + +  + H+K  + 
Sbjct: 119 KKLTNLIIDKTMPDITIFFEIKPEESKIRREQIR------IVSDRLDSETELFHQKVYKG 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSV 200
           + ++ + + DR  +VD+  S + V
Sbjct: 173 YHELIKKEKDRFIVVDATKSIEEV 196


>gi|254230304|ref|ZP_04923692.1| thymidylate kinase [Vibrio sp. Ex25]
 gi|151937164|gb|EDN56034.1| thymidylate kinase [Vibrio sp. Ex25]
          Length = 210

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGK+T I  +   L+    +  V TREPGGTP AE  R ++      +E  
Sbjct: 6   FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 66  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 126 TLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    I+++  + + V+ +I + + E + ++
Sbjct: 180 DPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 210


>gi|329297193|ref|ZP_08254529.1| thymidylate kinase [Plautia stali symbiont]
          Length = 211

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 6/164 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT    +   L  +   DV  TREPGGTP AE  R VL+  G+D  + 
Sbjct: 5   FIVIEGLEGAGKTTAREAVVAVLHEQGIEDVVFTREPGGTPLAEQLR-VLVKQGIDGEKV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  SDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGCGRGLDTQLMATLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
             + +  PD T+ LD+  +IGL+R + R  L   E   L++F R
Sbjct: 124 AVLGDFRPDLTLYLDVTPEIGLQRARARGELDRIEQESLNFFTR 167


>gi|325478730|gb|EGC81841.1| dTMP kinase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 209

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 12/215 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG +G+GKT+ ++ +K+ L +   +    REPGGT  +E  R +++    ++  
Sbjct: 3   GKLIVFEGPDGSGKTSVLNEVKKILDQDGIEYLTFREPGGTDISEKIRDIIIDNDNEKMT 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E ++FAA+R   +E  IRP+L  GK +LCDRF+ SS  YQG     ++L ++ +++I
Sbjct: 63  ARCECLLFAASRAQLIEEEIRPSLEAGKTVLCDRFVLSSLLYQG---VGRNLGIEEVKKI 119

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   +  D TI  D+     L R +  ++       D  E ++   H+K    +  +
Sbjct: 120 NDFATDNIRADLTIFFDIDYKTALIRKRKNFT------ADRLENENFDFHKKIFDAYKKM 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A    D    +D++ S + V    + +++E ++ +
Sbjct: 174 ADEYEDEIKKIDASLSIEDVTKQAIQLIYESLEDK 208


>gi|262404371|ref|ZP_06080926.1| thymidylate kinase [Vibrio sp. RC586]
 gi|262349403|gb|EEY98541.1| thymidylate kinase [Vibrio sp. RC586]
          Length = 212

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 16/209 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   L +   + +  TREPGGT  AE  R ++     
Sbjct: 1   MNAK-FIVIEGLEGAGKSTAIQVIVETLHQHGIEQITRTREPGGTVLAEKLRALVKE--- 56

Query: 60  DEFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           D  G E     E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG        
Sbjct: 57  DHPGEELQDITELLLVYAARVQLVENVIKPALAQGFWVVGDRHDMSSQAYQGGGRQIALS 116

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ
Sbjct: 117 TMQNLKQTALGDFKPDLTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERARQ 170

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            +L++A    D    VD+  S + V+ +I
Sbjct: 171 RYLELAECD-DTVIWVDAEQSIEQVSKDI 198


>gi|291320671|ref|YP_003515936.1| thymidylate kinase [Mycoplasma agalactiae]
 gi|290753007|emb|CBH40983.1| Thymidylate kinase [Mycoplasma agalactiae]
          Length = 215

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 5   LFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT +  L+++ L++K      VTREPGG     +E  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTILQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILDKE-S 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +EA+++ A+R  H+E VI  AL E K++LCDR++DS YAYQG        F   L
Sbjct: 60  RLSPISEALLYTASRRIHIEKVILSALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179
            E+ ++  +PD TI +D+  +      Q+ Y    S  + D  + + +  H+K    + +
Sbjct: 120 TEMVIESTIPDITIFIDITAE------QSEYRRNVSRLISDRLDSESLEFHKKVFDAYKE 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205
           +    P R  IV+   S   +   I+
Sbjct: 174 VINLDPKRFIIVNGLQSIPEILDEIV 199


>gi|206973280|ref|ZP_03234202.1| thymidylate kinase [Bacillus cereus AH1134]
 gi|206732164|gb|EDZ49364.1| thymidylate kinase [Bacillus cereus AH1134]
          Length = 205

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 4/195 (2%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G  KTT ++LL  +L++++ DV +T+EPGGT   E  R +L++    +    +E  +F A
Sbjct: 5   GFWKTTQLNLLHSYLKKRSIDVILTKEPGGTVIGEKLRELLVNNLEIKLERLSELFLFEA 64

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R + ++ +++P +  GK ++ DR +D S AYQG         +D L  ++ +   PD T
Sbjct: 65  DRHETIKKIVKPNIKAGKFVISDRGIDGSVAYQGFGREIDLEVIDYLTSLATENKQPDLT 124

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I++D+  +I  +R+ N    R +  +D F+ + +      R+ FL +A+  P R   VD 
Sbjct: 125 ILIDIDPEIAQQRIAN----RNNVDIDKFDLEQLQFQANVRKGFLYMAKQNPKRIVTVDG 180

Query: 194 AHSFQSVATNILNIV 208
             + + +   I+ ++
Sbjct: 181 TLAIEDLHQKIVTLI 195


>gi|156975176|ref|YP_001446083.1| thymidylate kinase [Vibrio harveyi ATCC BAA-1116]
 gi|166223128|sp|A7MVG2|KTHY_VIBHB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|156526770|gb|ABU71856.1| hypothetical protein VIBHAR_02903 [Vibrio harveyi ATCC BAA-1116]
          Length = 210

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGK+T I  +   L+    +  V TREPGGTP AE  R ++      E   
Sbjct: 6   FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRGLVKEEHEGEDLK 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL   + ++ DR   SS AYQG         + +L++ 
Sbjct: 66  DMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ E  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L++A N
Sbjct: 126 TLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLELA-N 178

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   I+++  S + VA +I
Sbjct: 179 ADDSIVIINAEQSIEDVAQDI 199


>gi|153835690|ref|ZP_01988357.1| thymidylate kinase [Vibrio harveyi HY01]
 gi|148867682|gb|EDL66956.1| thymidylate kinase [Vibrio harveyi HY01]
          Length = 209

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGK+T I  +   L+    +  V TREPGGTP AE  R ++      E   
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEDLK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL   + ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ E  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L++A N
Sbjct: 125 TLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLELA-N 177

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
             D   I+++  S + VA +I
Sbjct: 178 ADDSIVIINAEQSIEDVAQDI 198


>gi|148358930|ref|YP_001250137.1| thymidylate kinase [Legionella pneumophila str. Corby]
 gi|296106978|ref|YP_003618678.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|166221751|sp|A5IBP1|KTHY_LEGPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148280703|gb|ABQ54791.1| thymidylate kinase [Legionella pneumophila str. Corby]
 gi|295648879|gb|ADG24726.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy]
          Length = 212

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL EG+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNEGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179
              ++   PD T+ LD+  ++G+ R ++R  +   E   +++F R    IH+        
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDTYH----- 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           I   Q     ++D+    + V ++I +++ E ++
Sbjct: 176 ILVKQNPEIMMIDANRPLEDVQSSIQSVIEEFIE 209


>gi|260435535|ref|ZP_05789505.1| thymidylate kinase [Synechococcus sp. WH 8109]
 gi|260413409|gb|EEX06705.1| thymidylate kinase [Synechococcus sp. WH 8109]
          Length = 209

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 94/188 (50%), Gaps = 13/188 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
           +G FI  EGI+G GKTT I  L  +L       K   V  TREPGGTP   + R +LL  
Sbjct: 2   TGRFIVLEGIDGCGKTTQIQHLIEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61

Query: 58  GVDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              E  A  AE +++AA R  HVE +IRPAL  G  ++ DRF  S+ AYQG         
Sbjct: 62  ADQEAPAPTAELLLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+   + PD T+ L L V   L+R   R   +E    D  E +     E+  Q 
Sbjct: 122 IQRLERIATTGLQPDLTLWLRLSVQESLQR---RLGDKE----DRIEAEGAAFLERVAQG 174

Query: 177 FLDIARNQ 184
           F ++AR +
Sbjct: 175 FAELARQR 182


>gi|193216551|ref|YP_001999793.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1]
 gi|193001874|gb|ACF07089.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1]
          Length = 213

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 10/207 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAA--RHVLLSCGVDE 61
           FI+ EG++G+GKTT I +LK +L    K  D   TREPG   +AEA   R ++L  G ++
Sbjct: 7   FITIEGMDGSGKTTIIEMLKDYLFNIGKIDDFVFTREPGSAYSAEAENIRKIVLDSG-NK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F    +A++F  +R  ++E  I PAL   K ++ DRF  SS+ YQG         +  + 
Sbjct: 66  FSPMVDALLFVTSRRINLEKAIWPALKAKKNVISDRFWHSSFVYQGILGKVGLDKVRQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E+ +++  PD  I  DL  ++ ++R+     LRE    D  E   V  ++  R+ + ++ 
Sbjct: 126 EMVIEDTQPDFVIFFDLQPEVSVERLT---KLREKT--DRLETDQVEYYQALRKAYFEVI 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            + P +  I+D++ S   V   +L I+
Sbjct: 181 NSDPTKFRIIDASQSIVKVFEQLLIIL 207


>gi|119719934|ref|YP_920429.1| dTMP kinase [Thermofilum pendens Hrk 5]
 gi|119525054|gb|ABL78426.1| thymidylate kinase [Thermofilum pendens Hrk 5]
          Length = 254

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 19/216 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ GL+++ EGI+G+GKTT  ++L   L  + + V + REP       A +  L    +D
Sbjct: 51  VDGGLYVALEGIDGSGKTTQAAMLYEKLSAEGFQVVIVREPW----VPAIKEFLYKHDLD 106

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EAE  +FAA R+     V+ P+L  GKI++ DR + +S AYQ  R + Q   L   
Sbjct: 107 ---VEAEVYLFAADRIILQREVVLPSLRAGKIVVSDRSVFASLAYQSSRGADQDFILAVN 163

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +      PD  ++LDLPV+  +KR+ +R +         FE    M  EK R  +L +
Sbjct: 164 KSVR----FPDVVVLLDLPVEEAMKRLSSRVAQTR------FEDPGYM--EKVRAKYLQL 211

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           A   P++  +VD++   + V   IL  +  +V+ R+
Sbjct: 212 AEEYPEKFIVVDASKPPEEVNREILREIVSIVRSRI 247


>gi|88807102|ref|ZP_01122614.1| Thymidylate kinase [Synechococcus sp. WH 7805]
 gi|88788316|gb|EAR19471.1| Thymidylate kinase [Synechococcus sp. WH 7805]
          Length = 213

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 20/161 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL-- 55
           +G F+  EGI+G GKTT +  L  +L           +H+TREPGGTP   A R +LL  
Sbjct: 2   TGRFLVLEGIDGCGKTTQLRQLADWLPGSGLMPDGATLHLTREPGGTPLGRALRELLLHP 61

Query: 56  -----SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-R 109
                 C       EAE +++AA R  HV+  I PAL  G  +L DRF  S+ AYQG  R
Sbjct: 62  PDAAAPC------PEAELLMYAADRAQHVQRRILPALKCGDWVLSDRFSGSTVAYQGHGR 115

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
              Q L LD L+ I+   ++PD T+ LDLP++  + R  +R
Sbjct: 116 GLDQSLILD-LERIATAGLVPDVTLWLDLPLEASIARRGDR 155


>gi|320538798|ref|ZP_08038475.1| thymidylate kinase [Serratia symbiotica str. Tucson]
 gi|320031143|gb|EFW13145.1| thymidylate kinase [Serratia symbiotica str. Tucson]
          Length = 212

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F+  EG+EGAGKTT    +   L+    + +  TREPGGTP AE  R +      +E   
Sbjct: 5   FVVIEGLEGAGKTTARDTVASVLREHGVNNIVFTREPGGTPLAEKLRDLFKRGVGNELPT 64

Query: 65  -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG    +    + SL++ 
Sbjct: 65  IKAEVLMLYAARVQLVETVIKPALERGAWVVGDRHDLSSQAYQGGGRGTDPQLMLSLRDA 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T+ LDLP  IGL+R Q R        LD  E++ +    + R+ +L +A  
Sbjct: 125 VLGSFRPDLTLYLDLPPLIGLQRAQAR------GELDRIEQEVLPFFTRTRERYLALA-A 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           Q +    +D+    + V  +I   V   +Q++
Sbjct: 178 QNESIVTLDATQPLEQVTASIRACVSRWLQQQ 209


>gi|161869607|ref|YP_001598774.1| thymidylate kinase [Neisseria meningitidis 053442]
 gi|161595160|gb|ABX72820.1| thymidylate kinase [Neisseria meningitidis 053442]
          Length = 173

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 7/171 (4%)

Query: 38  TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
           TREPGGTP  EA R +LL+    + G  AE ++  AAR+ H+E+VI PAL +G  ++ DR
Sbjct: 4   TREPGGTPVGEALREILLNPET-KAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDR 62

Query: 98  FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           F D+++AYQG         ++ L+      + PD T++LD+P+++ + R+      RE  
Sbjct: 63  FTDATFAYQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQ---TREK- 118

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             D FE++      + R ++L+ A   P+R  I+DS  S   V  +I  ++
Sbjct: 119 --DRFEQEQADFFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNSIEKVL 167


>gi|312172085|emb|CBX80342.1| Thymidylate kinase [Erwinia amylovora ATCC BAA-2158]
          Length = 210

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 4/166 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R ++    V E
Sbjct: 2   NGKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMVGE 61

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +  L
Sbjct: 62  RVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMSCL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           ++  + +  P  T+ LD+  ++GL+R + R  L   E   L++F R
Sbjct: 122 KQAVLGDFAPHLTLYLDVTPELGLQRARARGELDRIEQESLNFFTR 167


>gi|54294285|ref|YP_126700.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens]
 gi|81601377|sp|Q5WWU9|KTHY_LEGPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53754117|emb|CAH15590.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens]
 gi|307610103|emb|CBW99644.1| hypothetical protein LPW_14121 [Legionella pneumophila 130b]
          Length = 212

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL  G+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179
              ++   PD T+ LD+  ++G+ R ++R  +   E   +++F R    IH+        
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDTYH----- 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           I   Q     ++D+  S + V ++I +++ E ++
Sbjct: 176 ILVKQNPEIMMIDANRSLEEVQSSIQSVIEEFIE 209


>gi|160946460|ref|ZP_02093669.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270]
 gi|158447576|gb|EDP24571.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270]
          Length = 209

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 15/216 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG +G GKT+ ++L+K +  + N  +  TREPGGT  +E  R ++LS       
Sbjct: 2   GLFITFEGPDGCGKTSIMNLIKEYY-KSNEKIIFTREPGGTKISEKIREIILSNDNSNMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++++A+R  H++ +I+P L +G I++ DRF+ SS AYQG     + L ++++++I
Sbjct: 61  PRTEALLYSASRAQHIDELIKPNLDKGNIVISDRFVLSSLAYQG---GGRELGVENVKKI 117

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++  V PD  I   +     LK    R SL   A  D  E      H +    ++++
Sbjct: 118 NDFAINGVNPDMIIFFYVDPLTTLK----RKSLNVDA--DRLELSGDDFHSRVYDTYMEL 171

Query: 181 ARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214
                D      VD+  S   V  ++ NI+ E +++
Sbjct: 172 LEKMKDEKVLKKVDATKSMSEVFEDVKNIIDEKLEE 207


>gi|145590421|ref|YP_001152423.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282189|gb|ABP49771.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514]
          Length = 196

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 115/211 (54%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+  EGI+G+GK+T ISLL + L R    V+VTREP  +P     +   L  G  +    
Sbjct: 3   FVVIEGIDGSGKSTVISLLSKLLPR----VYVTREPSASPIGRLIKEWALREGTAD--PR 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +A++FAA R++H +  I P L EG I++C+R+++SS AYQG    +  + ++ ++ I+ 
Sbjct: 57  VDALLFAADRIEHYKREIEPRLREGYIVICERYVESSIAYQG----AAGVPIEYIKFINS 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T+ILD+  ++ + RV+ R +  +   L + +R         R I+L  +R   
Sbjct: 113 AVPKPDITVILDVDPEVAIARVKQRGTAEKYEQLSFLKRV--------RGIYL--SRAAE 162

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +   ++D++   + VA  +      L++KR+
Sbjct: 163 EGYPVLDASRPAEEVAKEVAR----LIEKRL 189


>gi|254430315|ref|ZP_05044018.1| thymidylate kinase [Cyanobium sp. PCC 7001]
 gi|197624768|gb|EDY37327.1| thymidylate kinase [Cyanobium sp. PCC 7001]
          Length = 213

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 9/165 (5%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLL-SCGVD 60
            EGI+G GKTT +  L R+L+         +  + VTREPGGTP   A R +LL   G  
Sbjct: 3   LEGIDGCGKTTQLQALSRWLESSEAGCLPPDRQLIVTREPGGTPLGRALRELLLHPPGGA 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G  AE +++AA R  HVE+ IRPAL  G  +L DRF  S+ AYQG         +  L
Sbjct: 63  APGTTAELLLYAADRAQHVEHTIRPALAAGHWVLSDRFSGSTAAYQGHGRGLDLDLIQQL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
           + ++   + PD T+ LDLP++  L+R   R + R E+A   + ER
Sbjct: 123 EAVATAGLQPDLTLWLDLPLEDSLRRRGGRAADRIEAAGAGFLER 167


>gi|29135124|ref|NP_803754.1| ORF188 [Pseudomonas phage phiKZ]
 gi|18996653|gb|AAL83089.1|AF399011_188 PHIKZ188 [Pseudomonas phage phiKZ]
          Length = 352

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 15/226 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61
           +GLF+  EG EG GKTT   ++   L+++NYDV   REPGGT  +E  R +L+     DE
Sbjct: 2   NGLFVCIEGTEGVGKTTVTKMVVEELRKRNYDVVAMREPGGTATSEKIRQMLIWPEFKDE 61

Query: 62  F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-----YQGERDSSQHL 115
               E + ++ +A R+ +VEN+IRPAL + KI++ +RF+ S+YA     ++        L
Sbjct: 62  VRPPEFDVLMHSAGRMLNVENIIRPALKDDKIVITERFIASTYALNVVPFEETNPYLSKL 121

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           F+D LQ  ++  +    T  L  P ++  KR++ R        LDY+E K      K  +
Sbjct: 122 FMDILQG-TLHSIPEPATFFLTAPEEVRKKRIEMR-----DRGLDYYESKGSSYFNKVDE 175

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            +  +  NQP    +VD+      +   I+  +  L  K+ +  SS
Sbjct: 176 GYGRLI-NQPSSI-VVDTNRDLDIIVNEIVESIIFLRDKQKNKQSS 219


>gi|33864255|ref|NP_895815.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9313]
 gi|46576455|sp|Q7V4G2|KTHY_PROMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33641035|emb|CAE22164.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9313]
          Length = 216

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 7/169 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
           SG F+  EGI+G GKTT +  L  +L R     +   +H+TREPGGT    A R ++L  
Sbjct: 2   SGRFLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGIALRKLVLHP 61

Query: 58  GVDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             D      AE +++AA R  HV  +IRPAL +G  +L DRF  S+ AYQG         
Sbjct: 62  PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
           +  L++I+   ++PD T  L+LPV+  L R   R + R E+  +D+  R
Sbjct: 122 IQQLEQIATAGLVPDLTFWLELPVEESLLRRDARSNDRIEAEGVDFLTR 170


>gi|328951753|ref|YP_004369087.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
 gi|328452077|gb|AEB07906.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
          Length = 217

 Score = 99.4 bits (246), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 111/225 (49%), Gaps = 22/225 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+FEG++G GKTT   LL + L R    V +TREP   P  +  R +LL  G    
Sbjct: 9   GGRLIAFEGVDGVGKTTQAHLLAQALSRLGLSVILTREPTTGPWGQQIRQILLH-GRQGL 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE  +F A R +HV  VIRPAL+ GKI++ DR+  SS AYQG       L LD  + 
Sbjct: 68  TPKAELELFIADRREHVAQVIRPALVAGKIVITDRYYFSSMAYQGA------LGLDPDRI 121

Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               E     PD  IIL LP+     R+Q R   + S+    FE  ++    K  QIF  
Sbjct: 122 QKCHETFAPRPDLAIILTLPLSEITARLQQRSGQKRSS----FE--NLAYLTKVAQIF-- 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ---KRVSPLSS 221
            +R +      +D   +  +V   IL +V  L++   K+ +P+S 
Sbjct: 174 -SRLRAPYLQHLDGQGTIAAVHARILTLVQPLLKPSRKQSAPVSG 217


>gi|209695681|ref|YP_002263610.1| thymidylate kinase [Aliivibrio salmonicida LFI1238]
 gi|238057695|sp|B6EJ04|KTHY_ALISL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|208009633|emb|CAQ79929.1| thymidylate kinase [Aliivibrio salmonicida LFI1238]
          Length = 210

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 13/204 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGK+T I  +   L +      VT REPGGTP AE  R ++     DE   
Sbjct: 4   FIVIEGLEGAGKSTAIKNVLATLAKHGITAPVTTREPGGTPLAEKMRELVKQGHPDEPLT 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR   V NVI+PAL  G  ++ DR   SS AYQG         + +++  
Sbjct: 64  DMAELLLLYAARAQLVGNVIKPALAAGNWVVGDRHDLSSQAYQGGGRGFDRELMATMKRT 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  PD TI +D+   +GL+R   R  L   E   LD+FER         R+ +L+ A
Sbjct: 124 VLGDFTPDLTIYMDIDPKLGLQRASARGELDRIEQMKLDFFERS--------RERYLEFA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205
            N  +    +D+     +V  +I+
Sbjct: 176 NND-ESIITIDAGQDLDTVTASII 198


>gi|307595585|ref|YP_003901902.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429]
 gi|307550786|gb|ADN50851.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429]
          Length = 199

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 4/149 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++ EGI+G GK+T IS+L+R L+   Y V+ T EP  +P     R  LL  G +    
Sbjct: 1   MFVAIEGIDGVGKSTVISMLRRKLEESGYRVYTTAEPSQSPIGRLIRDWLLKPGSNVAHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++F A R+ H    ++P L  G +++ +R+++S+ AYQG     Q    + L E+ 
Sbjct: 61  SIFALLFTADRVQHYYGEVKPMLDSGYLVITERYMESTLAYQGAMGLQQ----EWLMELH 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
                PD TIILD PVDI + R+++R  L
Sbjct: 117 RFVPKPDLTIILDAPVDIVISRLRSRREL 145


>gi|146329656|ref|YP_001210096.1| thymidylate kinase [Dichelobacter nodosus VCS1703A]
 gi|172047332|sp|A5EXE3|KTHY_DICNV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146233126|gb|ABQ14104.1| thymidylate kinase [Dichelobacter nodosus VCS1703A]
          Length = 203

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  +G EG+GK++ I  +  FLQ+    V  TREPGGT   EA R ++LS       
Sbjct: 3   GKFICLDGTEGSGKSSQIQAICSFLQQHGKTVITTREPGGTQIGEAIRELVLSPHYQP-Q 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E ++  AAR +H++ VI P L  G  ++ DRF D++YAYQG         + +L++I
Sbjct: 62  ALTELLLILAARHEHLQTVILPHLAAGTWVISDRFNDATYAYQGYGRGIDLKIIKTLEQI 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150
                 PD   IL LP  I  +RV NR
Sbjct: 122 IQASFQPDLACILCLPEHIAAERVHNR 148


>gi|52841629|ref|YP_095428.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|59798153|sp|Q5ZVP1|KTHY_LEGPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52628740|gb|AAU27481.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 212

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL  G+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179
              ++   PD T+ LD+  ++G+ R ++R  +   E   +++F R    IH+        
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDTYH----- 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           I   Q     ++D+  S + V ++I +++ E ++
Sbjct: 176 ILVKQNPEIIMIDANRSLEEVQSSIQSVIEEFIE 209


>gi|116073928|ref|ZP_01471190.1| Thymidylate kinase [Synechococcus sp. RS9916]
 gi|116069233|gb|EAU74985.1| Thymidylate kinase [Synechococcus sp. RS9916]
          Length = 215

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 7/168 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL-SC 57
           G F+  EGI+G GKTT +  L  +L           +  TREPGGTP  +A R +LL   
Sbjct: 6   GRFLVMEGIDGCGKTTQMQRLAEWLPGSGLMPSGAQLVQTREPGGTPLGQALRQLLLHPP 65

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                G  AE +++AA R  HV+ VIRPAL  G  ++ DRF  S+ AYQG         +
Sbjct: 66  EAVAPGPVAELLLYAADRAQHVDQVIRPALARGDWVISDRFAGSTLAYQGYGRELNRELI 125

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
             L++I+   + PD T +LDLP+ +   R  ++ + R E+A   + +R
Sbjct: 126 VQLEQIATTGLQPDATFLLDLPLAVSQARRADQANDRIEAAGQAFLQR 173


>gi|260655331|ref|ZP_05860819.1| dTMP kinase [Jonquetella anthropi E3_33 E1]
 gi|260629779|gb|EEX47973.1| dTMP kinase [Jonquetella anthropi E3_33 E1]
          Length = 200

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 11/204 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G GK+T  +LL   L  +  DV  TREPGG P   A R +LL  G+   G+
Sbjct: 1   MFITLEGIDGCGKSTQAALLANLLAERR-DVVRTREPGGWPEGGALRELLLHGGL--CGS 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A R +H   VI PAL  G+ ++C+R+ DS+ AYQ          +++L +  
Sbjct: 58  WTEVLLFVADRCEHASKVILPALRRGETVICERYNDSTLAYQCWGRGLDREKVEALIDWC 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                P+ T+  DLPV++ L R  +R       C D FE +++  H +  Q F +++R +
Sbjct: 118 GLP-QPEVTLWFDLPVELALSRRASR-----GGC-DRFEAQELAFHRRIAQGFAELSR-E 169

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
             R   +D A S   V   ++N +
Sbjct: 170 TGRIVRIDGAQSEADVTEQMVNAL 193


>gi|59712342|ref|YP_205118.1| thymidylate kinase [Vibrio fischeri ES114]
 gi|73920832|sp|Q5E416|KTHY_VIBF1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59480443|gb|AAW86230.1| thymidylate kinase [Vibrio fischeri ES114]
          Length = 210

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 13/205 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGK+T I  +   L +      VT REPGGTP AE  R ++     DE   
Sbjct: 4   FIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPLT 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR   V NVI+PAL  G+ ++ DR   SS AYQG         + +++  
Sbjct: 64  DMAELLLLYAARAQLVGNVIKPALARGEWVVGDRHDLSSQAYQGGGRGFDRELMMTMRNT 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  PD TI +D+   +GL+R   R  L   E   LD+FER         R+ +L+ A
Sbjct: 124 VLGDFKPDLTIYMDIDPKLGLQRASARGELDRIEQMKLDFFERS--------RERYLEFA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
            N  +    +D+    ++V  +I+ 
Sbjct: 176 -NSDESIITIDAGQDLETVTNSIIT 199


>gi|108804784|ref|YP_644721.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941]
 gi|108766027|gb|ABG04909.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941]
          Length = 203

 Score = 98.6 bits (244), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 102/201 (50%), Gaps = 14/201 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64
           ++ EG++  GK+T   LL+  L    + V  TREPGGTPAAE  R VLL    D  GA  
Sbjct: 1   MTVEGLDFCGKSTLARLLEGEL--GGWRVRFTREPGGTPAAERIRGVLL----DPRGAMD 54

Query: 65  -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA ++AAAR DHV  +I P+L  G+ ++C+RFLDSS AYQG         +  L   
Sbjct: 55  PWTEAYLYAAARADHVRRLILPSLERGETVVCERFLDSSLAYQGRGRGLGMEAVRRLNAW 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V ++ PD T  L +  +      + R +    A  D  ER       +  + F ++AR 
Sbjct: 115 AVGDLAPDATFYLRVGAE-----ERARRARASGAPPDRIERSGGAFMRRVEEGFEELARR 169

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
           +P R  ++D     + +A  +
Sbjct: 170 EPGRVRVLDGTLPPRELAALV 190


>gi|147919740|ref|YP_686514.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I]
 gi|110621910|emb|CAJ37188.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I]
          Length = 208

 Score = 98.6 bits (244), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 107/210 (50%), Gaps = 15/210 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVD 60
             G  IS EGI+GAGK+T I +L+R++Q +  +  + +EP  G    E AR  +      
Sbjct: 5   KKGFLISIEGIDGAGKSTQIKMLQRWMQDRKIEHVILKEPTAGQYGREIARRAIAHEAT- 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E E  +F   R + VE  I PAL  GK+++ DR+  S+ AYQG R        +  
Sbjct: 64  --STEEELWLFMEDRKEDVEKNILPALRAGKVVVMDRYYQSNIAYQGARGLDTEKIREEN 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  S +   PD  I+LD+    GL R+ N    +  + LD FE+++ +  +K R IFLDI
Sbjct: 122 ERFSPR---PDLVIVLDIDPARGLSRIVN----QRKSQLDAFEKEEYL--QKVRNIFLDI 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            R QP+   I+ +  S + V   I+  + E
Sbjct: 173 GR-QPNGV-IISADQSPEKVHQEIVKAIEE 200


>gi|197334909|ref|YP_002156557.1| thymidylate kinase [Vibrio fischeri MJ11]
 gi|238690296|sp|B5FG34|KTHY_VIBFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|197316399|gb|ACH65846.1| thymidylate kinase [Vibrio fischeri MJ11]
          Length = 210

 Score = 98.6 bits (244), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG+EGAGK+T I  +   L +      VT REPGGTP AE  R ++     DE   
Sbjct: 4   FIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPLT 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++  AAR   V NVI+PAL +G+ ++ DR   SS AYQG         + +++  
Sbjct: 64  DMAELLLLYAARAQLVGNVIKPALAKGEWVVGDRHDLSSQAYQGGGRGFDRDLMMTMRNT 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  PD TI +D+   +GL+R   R  L   E   LD+FER         R+ +L+ A
Sbjct: 124 VLGDFKPDLTIYMDIDPKLGLQRASARGELDRIEQMKLDFFERS--------RERYLEFA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
            N  +    +D+    ++V  +I+ 
Sbjct: 176 -NSDESIITIDAGQDLETVTQSIIT 199


>gi|54297309|ref|YP_123678.1| thymidylate kinase [Legionella pneumophila str. Paris]
 gi|59798140|sp|Q5X5G6|KTHY_LEGPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53751094|emb|CAH12505.1| hypothetical protein lpp1354 [Legionella pneumophila str. Paris]
          Length = 212

 Score = 98.2 bits (243), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 12/214 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL  G+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMNMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179
              ++   PD T+ LD+  ++G+ R ++R  +   E   +++F R    IH+     +  
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDT----YHV 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + +  P+   ++D+  S   V ++I +++ E ++
Sbjct: 177 LVKQNPE-IMMIDANRSLDEVQSSIQSVIEEFIE 209


>gi|148240580|ref|YP_001225967.1| thymidylate kinase [Synechococcus sp. WH 7803]
 gi|166223122|sp|A5GP05|KTHY_SYNPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147849119|emb|CAK24670.1| Thymidylate kinase [Synechococcus sp. WH 7803]
          Length = 213

 Score = 97.8 bits (242), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 88/155 (56%), Gaps = 10/155 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G F+  EGI+G GKTT +  L  +L       +   +H+TREPGGTP   A R +LL   
Sbjct: 3   GRFLVLEGIDGCGKTTQLRQLAEWLPDSGLMPEGATLHLTREPGGTPLGRALRELLLHP- 61

Query: 59  VDEFGA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHL 115
            DE     EAE +++AA R  HV+  I PAL  G  +L DRF  S+ AYQG+ R   + L
Sbjct: 62  PDEAAPCPEAELLMYAADRAQHVQRRILPALACGDWVLSDRFSGSTLAYQGDGRGLDRAL 121

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            LD L+ I+   ++PD T+ LDL ++  + R + R
Sbjct: 122 ILD-LERIATAGLVPDVTLWLDLSLEASMARREER 155


>gi|78213888|ref|YP_382667.1| thymidylate kinase [Synechococcus sp. CC9605]
 gi|123577474|sp|Q3AH20|KTHY_SYNSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78198347|gb|ABB36112.1| Thymidylate kinase [Synechococcus sp. CC9605]
          Length = 209

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 6/150 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
           +G FI  EGI+G GKTT I  L  +L       K   V  TREPGGTP   + R +LL  
Sbjct: 2   TGRFIVLEGIDGCGKTTQIQHLLEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61

Query: 58  GVDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              E  A  AE +++AA R  HVE +IRPAL  G  ++ DRF  S+ AYQG         
Sbjct: 62  SDQEAPAPTAELMLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +  L++I+   + PD T+ L L V   L+R
Sbjct: 122 IQRLEQIATAGLQPDITLWLRLSVQESLQR 151


>gi|212696419|ref|ZP_03304547.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676591|gb|EEB36198.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 167

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 12/173 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GL I FEG +G+GKTT +  +   L +  YD++  REPGGT  +E  R ++L     + 
Sbjct: 2   NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA+R   +E  +RP L +G I+LCDRF+ SS  YQG     + L +D +++
Sbjct: 62  SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQG---IGRGLGIDEVKK 118

Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           I   ++ E+  D T+ L++     + R       R++   D  E +D   H+K
Sbjct: 119 INDFAIGEIKADLTLFLNIDYKTAIDRK------RKNFVSDRLENEDDSFHKK 165


>gi|111225913|ref|YP_716707.1| thymidylate kinase (dTMP kinase) (partial match) [Frankia alni
           ACN14a]
 gi|111153445|emb|CAJ65203.1| Thymidylate kinase (dTMP kinase) (partial match) [Frankia alni
           ACN14a]
          Length = 679

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 15/232 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLF++ EG EGAG++T + LL+ +L     +V VT   GGT      R +L       
Sbjct: 447 HAGLFVAVEGAEGAGRSTQVELLRTWLAASGREVVVTSGSGGTTTGARLRELLFDPST-R 505

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++ AA R +HV  VI PAL  G I++ DR++DS  A+Q    S     L  L 
Sbjct: 506 LHARTEALLAAADRAEHVSRVIEPALARGAIVITDRYVDSWIAFQCASRSVDAAELAVLA 565

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR--------VQNRYSLRESACLDYFERKD-----VM 168
           + +   ++PD T++LDL  D+G++R             S+ E A   + E  D     ++
Sbjct: 566 QWATHALVPDLTVLLDLSADLGMQRRPAGEPAAEPAEESVDEPAEESFREPVDEAGAELL 625

Query: 169 IHEKR-RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
            +  R R  FL +A+ +P R   VD+    + +   I  +V   V++R  PL
Sbjct: 626 AYRSRVRDGFLRLAQGEPARYLTVDANRPREEIHAEIRAVVASRVERRAVPL 677


>gi|15616958|ref|NP_240171.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219681711|ref|YP_002468097.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682266|ref|YP_002468650.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|11132949|sp|P57434|KTHY_BUCAI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|25288281|pir||A84971 dTMP kinase (EC 2.7.4.9) [imported] - Buchnera sp. (strain APS)
 gi|10039023|dbj|BAB13057.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219621999|gb|ACL30155.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219624554|gb|ACL30709.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 212

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 11/214 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63
           FI  EG+EGAGKT     +K  L++ +  +V + R+PG TP AE  R ++      D   
Sbjct: 6   FIVIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLI 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++  AAR+  VE  I+PAL  G  ++ DR   SS AYQG         +  LQ +
Sbjct: 66  KETELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSL 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +   +PD TI LD+  +IGL R   R        LD  E + +   +K R+ +L+  ++
Sbjct: 126 FLNNFIPDLTIYLDVSPEIGLARALKRNP------LDLIESRSLFFFKKTRRCYLE--KS 177

Query: 184 QPDRCHIVDSAH-SFQSVATNILNIVWELVQKRV 216
           + D+  I+ +A+ + + V  NI   +   + K+V
Sbjct: 178 KLDKKTIIINANLNIKKVTQNITKKMLNWLNKQV 211


>gi|254499174|ref|ZP_05111855.1| thymidylate kinase [Legionella drancourtii LLAP12]
 gi|254351608|gb|EET10462.1| thymidylate kinase [Legionella drancourtii LLAP12]
          Length = 212

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 16/218 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I  EG+EGAGK+T +S +  +L R       TREPGGT   E  R ++   G +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVSTVIDYLTRLEIKTITTREPGGTVIGELLRQII--KGTEYK 62

Query: 63  GA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           G    ++E ++   AR+  +E VI+PAL +G  ++ DRF  S+ AYQG         +  
Sbjct: 63  GVLDDKSELLLLYTARIQLLEQVIKPALQQGTWVIADRFELSTMAYQGGGRGLNEQMIQQ 122

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIF 177
           L   ++    PD T+ LD+  + G+KRV++R  +   E   +D+F R    +H      +
Sbjct: 123 LSAFALDGFKPDLTLYLDISPEEGMKRVKSRGEFDRIEQQSIDFFHR----VHSS----Y 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +   R  P+   ++D+      V   I  ++ E ++ +
Sbjct: 175 IHHVRTNPNAV-LIDAGLPLHEVQLAIQCVLKEFIEHK 211


>gi|171184628|ref|YP_001793547.1| dTMP kinase [Thermoproteus neutrophilus V24Sta]
 gi|170933840|gb|ACB39101.1| dTMP kinase [Thermoproteus neutrophilus V24Sta]
          Length = 204

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 20/203 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EGI+G+GK+T IS L   L +    V+ TREP G P     +   L  G  +    
Sbjct: 3   FVAIEGIDGSGKSTVISRLAEILPK----VYTTREPSGGPIGRLIKEWALRGGTVD--PH 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +A++FAA R++H    + P + EG I++ +R+++SS AYQG    +  + L+ ++ I+ 
Sbjct: 57  VDALLFAADRIEHYRREVEPKVREGYIVISERYVESSIAYQG----AAGVPLEFIKSINS 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T+ILD+  ++ + RV+ R +L +   + +  R         R+I+L  AR + 
Sbjct: 113 LVPRPDVTVILDVEPEVAISRVRQRGALEKYEQMAFLRRV--------REIYL--ARARE 162

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +   +VD+A   + VA  +  IV
Sbjct: 163 EGYPVVDAARPPEVVAREVAEIV 185


>gi|330943542|gb|EGH45881.1| thymidylate kinase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 143

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 7/145 (4%)

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           +VFAA R  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++    ++
Sbjct: 2   LVFAA-RAQHLAEVIRPALTRGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQFVQGDL 60

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A  +P R 
Sbjct: 61  RPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRTFFDAVRSTYLERANAEPARY 114

Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213
            +VD+  +   V  ++  ++ +L++
Sbjct: 115 RLVDAGQTLADVQASLDTLLPQLLE 139


>gi|327393492|dbj|BAK10914.1| thymidylate kinase Tmk [Pantoea ananatis AJ13355]
          Length = 211

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 11/202 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT    +   L+    D +  TREPGGTP AE  R VL+  G++  + 
Sbjct: 5   FIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLR-VLVKQGIEGEQV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  TDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+  + GL+R + R        LD  E++ +   E+ R+ +L +A 
Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALA- 176

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
              D    +D+    + V + +
Sbjct: 177 AADDSILTIDATQPLEQVTSAL 198


>gi|154151261|ref|YP_001404879.1| thymidylate kinase [Candidatus Methanoregula boonei 6A8]
 gi|153999813|gb|ABS56236.1| dTMP kinase [Methanoregula boonei 6A8]
          Length = 206

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 20/212 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+G+GK+T ++ LK  L+  +     TREPG T   ++ R  +     ++   
Sbjct: 2   VLVTLEGIDGSGKSTLLAALKESLE--DLSPVFTREPGATWVGDSVRRAI----AEQIDP 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFLDSL 120
             EA +F A    H+  V+RPAL E K+++ DR+ DS +AYQ             +L ++
Sbjct: 56  VCEATLFVADHAAHLATVVRPALAEHKLVISDRYSDSRFAYQAVTLEGVIPEPERWLRAM 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +     ++PD T +L +P+D  L R+  + S RE     +FER+DV+  EK +  +++ 
Sbjct: 116 HD--GWSIVPDKTFLLAIPIDDALARLSKK-SGRE-----HFERRDVL--EKVQNRYMEF 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           AR +PDR  IVDS     +VA  +   + ++V
Sbjct: 166 ARAEPDRFVIVDSMLDKDAVAEFVAGAIRQVV 197


>gi|317968090|ref|ZP_07969480.1| thymidylate kinase [Synechococcus sp. CB0205]
          Length = 214

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 6/165 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G F+  EGI+G GKTT I  LK++L       +   + VTREPGGT   +A R +LL   
Sbjct: 5   GRFLVLEGIDGCGKTTQIEALKQWLPSSGLMPEGAQLLVTREPGGTALGQALRQLLLHPP 64

Query: 59  VDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            D    + AE +++AA R  HV+  I PAL  G  +L DRF+ S+ AYQG         +
Sbjct: 65  GDAAPESTAELLLYAADRAQHVQQRIAPALEAGHWVLSDRFVGSTAAYQGYGRGLSLALI 124

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           + L  I+   + PD T++L++P+   L+R  +R + R  A  + F
Sbjct: 125 EQLAGIATAGLEPDLTVLLEIPLAESLRRRGHRPADRIEASGEAF 169


>gi|291617041|ref|YP_003519783.1| Tmk [Pantoea ananatis LMG 20103]
 gi|291152071|gb|ADD76655.1| Tmk [Pantoea ananatis LMG 20103]
          Length = 211

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 11/202 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           FI  EG+EGAGKTT    +   L+    D +  TREPGGTP AE  R VL+  G++  + 
Sbjct: 5   FIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLR-VLVKQGIEGEQI 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  TDKAELLMLYAARVQLVETVIKPALARGPGVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+  + GL+R + R        LD  E++ +   E+ R+ +L +A 
Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
              D    +D+    + V + +
Sbjct: 178 AD-DSILTIDATQPLEQVTSAL 198


>gi|308049573|ref|YP_003913139.1| thymidylate kinase [Ferrimonas balearica DSM 9799]
 gi|307631763|gb|ADN76065.1| thymidylate kinase [Ferrimonas balearica DSM 9799]
          Length = 207

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 12/208 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGV 59
             G FI  EG+EGAGK+T I+++ ++L+++  +  +  TREPGGTP AE  R +      
Sbjct: 3   EQGTFIVIEGLEGAGKSTAIAVVDQYLKQRFPEREIVHTREPGGTPLAEEIRAIWKQPRE 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118
           +      E ++  A R   VE+VI+PAL  G I++ DR   SS AYQ G R  ++ +   
Sbjct: 63  EAMAPMTELLMVYACRAQLVESVIKPALARGAIVVGDRHDLSSKAYQGGGRGLAEPVA-- 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L  +++ +  PD T+ LD+   +GL R + R        LD  E++ +   ++ R  + 
Sbjct: 121 RLSALTLGDFAPDLTLYLDIDPAVGLARARARGE------LDRIEQEALAFFQRARATYQ 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILN 206
             A   P R   +D+  S + V  +++N
Sbjct: 175 AEAAADP-RIVTIDAGQSLEQVHQSLIN 201


>gi|33866768|ref|NP_898327.1| thymidylate kinase [Synechococcus sp. WH 8102]
 gi|46576438|sp|Q7U437|KTHY_SYNPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33639369|emb|CAE08753.1| Thymidylate kinase [Synechococcus sp. WH 8102]
          Length = 209

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/153 (37%), Positives = 82/153 (53%), Gaps = 6/153 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
           SG FI  +GI+G GK+T +  L  +L          ++  TREPGGTP   + R +LL  
Sbjct: 2   SGRFIVLDGIDGCGKSTQLDHLLGWLPGSGLMPAGAELISTREPGGTPLGRSVRELLLHT 61

Query: 58  GVDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             ++  A  AE +++AA R  HVE +I P L  G  ++ DRF  S+ AYQG         
Sbjct: 62  RAEQAPAPTAELLLYAADRAQHVERLILPTLERGDWVISDRFSGSTMAYQGYGRGLDRQL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
           +D L+ I+   V PD T+ L LP++  L+R Q 
Sbjct: 122 IDQLERIATAGVQPDLTLWLTLPLEESLRRRQG 154


>gi|56751420|ref|YP_172121.1| thymidylate kinase [Synechococcus elongatus PCC 6301]
 gi|56686379|dbj|BAD79601.1| thymidylate kinase [Synechococcus elongatus PCC 6301]
          Length = 177

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 8/176 (4%)

Query: 35  VHVTREPGGTPAAEAARHVLLS--CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92
           +  TREPG T   +A R +LL+           AE +++AA R  HVE V+RP L  G +
Sbjct: 2   IVATREPGDTALGQALRSLLLTQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAV 61

Query: 93  LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           ++CDR++DS+ AYQG         +  L  ++   +  D T+ LDLPV I  +R Q R  
Sbjct: 62  VVCDRYVDSTVAYQGYGRGLDQSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQARGQ 121

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  D  E   +   E+ RQ F  IA  +PDR   +D+A     VA  I  +V
Sbjct: 122 ------GDRMEAAGLAFQERLRQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVV 171


>gi|71892180|ref|YP_277912.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|123640937|sp|Q492Q6|KTHY_BLOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71796286|gb|AAZ41037.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 212

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 12/203 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DE 61
           FI+ EG++GAGKTT    + ++L Q    D+  T EPGGTP ++  R VL+  G    + 
Sbjct: 5   FITIEGLDGAGKTTITHRVSKYLNQYGVTDILTTHEPGGTPVSDFLR-VLIKYGGPMNEP 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             + +E ++  AARL  +ENVI+PAL +G  ++ DRF  SS AYQG       L L +L 
Sbjct: 64  INSISELLMIYAARLQLIENVIKPALSKGYWVIGDRFDLSSQAYQGGGRGIDILLLHALS 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD T  LD+  ++ + R+ +R        LD  E++ +   ++ R  +  +A
Sbjct: 124 NKITNTLSPDLTFYLDISPELSISRINHRQK------LDRIEQEPLSFFDRVRSCYKKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
             + +   I D+  S + V+ +I
Sbjct: 178 SERKNIITI-DATQSLEEVSMSI 199


>gi|304413841|ref|ZP_07395258.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus
           Regiella insecticola LSR1]
 gi|304283561|gb|EFL91956.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus
           Regiella insecticola LSR1]
          Length = 603

 Score = 96.3 bits (238), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 93/176 (52%), Gaps = 8/176 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CG 58
           M +G FI  EG+EGAGKTT    + + L+     D+   REPGGTP AE  R ++     
Sbjct: 387 MITGKFIVIEGLEGAGKTTAGETVAQVLRANGINDIVQPREPGGTPVAEKLRELIKQRID 446

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D    +AE ++  AAR+  +ENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 447 SDPLTDKAEVLMLYAARVQLIENVIKPALARGTWVVGDRHDLSSQAYQGGGRDVDSKLMT 506

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEK 172
           SL++  +    PD T+ LD+  + GL RV+ R S    E   L +F R    +HE+
Sbjct: 507 SLRDSLLGSFRPDLTLYLDISPEQGLARVRLRGSPDRIEQESLAFFTR----VHER 558


>gi|288575015|ref|ZP_06393372.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570756|gb|EFC92313.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 213

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 3/151 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFIS EGI+G GK+T   LL+  L+ +   V +T+EPG        R +LL  G D  
Sbjct: 10  SGLFISLEGIDGCGKSTQAMLLRDHLEERGRSVVLTKEPGDWSHGGEIRRILL--GGDLR 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E  +F A R +H+  V+ PAL  G I++CDR+ DS+ AYQ         F++ L  
Sbjct: 68  HEHTELFLFMADRCEHLLQVVIPALDRGDIVICDRYTDSTLAYQCFGRGLDPTFVEGLFN 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
            S   V PD T  +D+P+   L R+ +R SL
Sbjct: 128 WSDFPV-PDVTFWIDVPLSCSLGRISSRGSL 157


>gi|299136794|ref|ZP_07029977.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8]
 gi|298601309|gb|EFI57464.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8]
          Length = 221

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 7/217 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G FI+FEG++G+GKTT +  L   L+ +   V   R+PGGT   +  R VLL    +
Sbjct: 1   MSRGFFITFEGLDGSGKTTQLRRLAAALEAEGLRVVTLRQPGGTALGDRIRSVLLDSRTE 60

Query: 61  -EFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            E G     AE  +  A R   + +VI PAL EG ++LCDR+ DSS AYQG         
Sbjct: 61  SELGGIAPTAEMALMFADRAQSLAHVIHPALAEGAVVLCDRYTDSSEAYQGAGRGLGSER 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKR 173
           + ++         P+ TI+L  P++  L R + R            + FER+    + + 
Sbjct: 121 IRAMHTAVCDGFQPELTILLLPPLEGSLARARRRNERNVRTRGTDENRFEREGDEFYRRI 180

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +++IAR   +R   +    S +++A  I  IV E
Sbjct: 181 YDQYVEIARRDSERVVTIAEEASIETIAERIRAIVRE 217


>gi|315179582|gb|ADT86496.1| thymidylate kinase [Vibrio furnissii NCTC 11218]
          Length = 209

 Score = 95.9 bits (237), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  +I  EG+EGAGK+T I  +   L      D+  TREPGGT  AE  R ++     
Sbjct: 1   MNSK-YIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDMTELLLMYAARVQLVENVIKPALQQGHWVVGDRHDMSSQAYQGGGRQIARETMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A    +    +++  S + V  +I
Sbjct: 174 ELAAG-DESVVTINAEQSIEQVTHDI 198


>gi|126465530|ref|YP_001040639.1| thymidylate kinase [Staphylothermus marinus F1]
 gi|166223119|sp|A3DM71|KTHY_STAMF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|126014353|gb|ABN69731.1| thymidylate kinase [Staphylothermus marinus F1]
          Length = 199

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 10/146 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N+G F+  EGI+GAGKT+    L+ FL  K ++VH T EP  T   EA     L    +E
Sbjct: 4   NNGFFLVLEGIDGAGKTSIAFKLRDFLVEKGFNVHYTYEPYNTLYVEA-----LKKKYNE 58

Query: 62  F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A  +A+ +AA RL H+   I P L  G I++CDR+  SS AYQ    S+Q   ++ +
Sbjct: 59  YRDAYLDALTYAADRLVHIRTEILPYLRRGYIVICDRYYYSSAAYQ----SAQGAPIEWV 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146
            EI+   + PD TI LD+   IG+KR
Sbjct: 115 LEINKYALKPDLTIYLDVDPAIGVKR 140


>gi|33239604|ref|NP_874546.1| thymidylate kinase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|46576462|sp|Q7VE61|KTHY_PROMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33237129|gb|AAP99198.1| Thymidylate kinase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 220

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 7/153 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58
           G+F+  EGI+G GK+T I  L ++L           + +TREPGGT   ++ R +LL   
Sbjct: 3   GIFLVLEGIDGCGKSTQIEHLAQWLPLSGLMPSAAKLFITREPGGTRLGKSLRQLLLGTS 62

Query: 59  VDEFGAE--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +   +   E +++AA R  HV  VI+P +  G  ++ DRF  S+ AYQG         
Sbjct: 63  PTDESPKPLTELLLYAADRAQHVSQVIQPKINNGDWVISDRFSSSTLAYQGFGRRLDKSL 122

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
           +  L+ I+ Q + PD T +L++PV   +KR +N
Sbjct: 123 IKELENIATQGITPDLTFLLEIPVSESIKRREN 155


>gi|307354495|ref|YP_003895546.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
 gi|307157728|gb|ADN37108.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
          Length = 206

 Score = 95.1 bits (235), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 22/223 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G GK+T +  LK  L   + D   TREPG T   EA R  + + G+D    
Sbjct: 1   MLITIEGIDGTGKSTLVENLKGLLS--DLDPVFTREPGSTWIGEAVRRGI-AEGIDPV-- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            AEA++F A    H+E VIRP L EG+I++ DR+ DS YAYQ    + + +  D ++ + 
Sbjct: 56  -AEALLFTADHAAHLETVIRPQLEEGRIIISDRYSDSRYAYQA--STLKGILPDPMKWMK 112

Query: 124 SVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S+ E   ++P+ T +L +PV+  ++R+    + +E     +FE    +  E+ +  +L +
Sbjct: 113 SIHEGWTIVPELTFLLVIPVEDAVERLNKNRTHQE-----HFECASTL--EEVKNNYLVL 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           A   P+R  +VD++     +A  +     E+ +K  S   SKK
Sbjct: 166 AEEDPERFILVDASLDTDEIAEFVAG---EIRKKAESKNKSKK 205


>gi|305663476|ref|YP_003859764.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
 gi|304378045|gb|ADM27884.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
          Length = 203

 Score = 95.1 bits (235), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 112/211 (53%), Gaps = 18/211 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI  EGI+GAGKTT   +L   L+R  Y    T EP  T   E     L S G+    
Sbjct: 7   GLFIVLEGIDGAGKTTIAKMLLDDLERNGYRTIYTFEPWTTRFVED----LKSLGMRR-D 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  +A+++AA RL HV+ VI PA+ +G I++CDR+  SS AYQ    S+  + +D +  +
Sbjct: 62  AYIDALIYAADRLVHVKEVIEPAIRDGYIVVCDRYFYSSVAYQ----SAMGVPMDWIITL 117

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD  I LD+  +IG+ R +  Y  R      + E ++  I  K R+I+L++ R 
Sbjct: 118 NMFALKPDLAIYLDVEPEIGIARKRG-YKSR------FPEYEEYGILRKAREIYLEMVRR 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    + +      V  ++ NIV+  +++
Sbjct: 171 --NMLVYIYAGRDIGDVYRDVRNIVYRAIEQ 199


>gi|330984099|gb|EGH82202.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 214

 Score = 94.7 bits (234), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 6/209 (2%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN  GL I  +G  G  K+T +  L + L  + ++V  T EPGGTP  E  R +  S   
Sbjct: 1   MNKKGLVICIDGSNGGFKSTTLKALAQHLSSQGHEVICTAEPGGTPIGEKIRVLTRSPEN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E    +  ++FAAAR  +VE VIRPA+  G I L DRF  SS A+Q          +  
Sbjct: 61  SEMSPLSNMLLFAAARAQNVEQVIRPAIERGCICLVDRFSSSSRAFQHAGQGMPLSLVSE 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +  I+   V  D T+I DL   +GL+R          A  D FE       ++ R  +L 
Sbjct: 121 IDAIARDGVAADYTLIFDLDPKLGLERNGG-----GKAADDKFELTGFEFLDRVRADYLV 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
            A   P+R  ++D++  ++ V  + +  V
Sbjct: 176 QAAEAPERFEVIDASRPYEQVLKSAIEAV 204


>gi|311697051|gb|ADP99924.1| thymidylate kinase-like protein [marine bacterium HP15]
          Length = 139

 Score = 94.7 bits (234), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 13/148 (8%)

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQE 127
           ++ +AAR DHV +VIRPAL  G+ ++ DRF+DS+YA Q    D+  HL   S ++I V  
Sbjct: 1   MLVSAARFDHVRSVIRPALASGQWVISDRFIDSTYALQVAVSDADLHLLFRSTRDIVVGP 60

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLDIARNQPD 186
            +PD TIILDLP+ +       R   R    LD  E  +D  +    R+  + +A  +P+
Sbjct: 61  TLPDLTIILDLPLAVA----HGRREQRRDGVLDPAEAARDFAVI---REALIAVAHQEPE 113

Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214
           RCH++D+  S   VA +I    W LV+ 
Sbjct: 114 RCHVIDANQSPDGVARDI----WRLVEP 137


>gi|297526188|ref|YP_003668212.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
 gi|297255104|gb|ADI31313.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
          Length = 199

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 19/210 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G F+  EGI+GAGKT+    L  FL  K + VH T EP  T   EA     L    DE
Sbjct: 4   SNGFFLVLEGIDGAGKTSIAFKLMDFLVEKGFSVHYTYEPYDTLYVEA-----LKKKYDE 58

Query: 62  F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A  +A+ +AA RL H+   I P L  G +++CDR+  SS AYQ    S+Q   ++ +
Sbjct: 59  YRDAYLDALTYAADRLVHIRTDILPYLRRGYVVICDRYYYSSAAYQ----SAQGAPIEWV 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            EI+   + PD TI LD+   IG+KR       RE     + E + +    K R+ +L +
Sbjct: 115 LEINKYALKPDLTIYLDVDPHIGVKR-------REGLNTRFPEYEKLDFLYKVRENYLWL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +       +VD+   F  V  ++  IV+E
Sbjct: 168 VKKG--YMVLVDANREFDKVYRDVEKIVFE 195


>gi|124024337|ref|YP_001018644.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9303]
 gi|166223100|sp|A2CD19|KTHY_PROM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123964623|gb|ABM79379.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9303]
          Length = 216

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 7/169 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
           SG  +  EGI+G GKTT +  L  +L R     +   +H+TREPGGT    A R ++L  
Sbjct: 2   SGRLLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGMALRKLVLHP 61

Query: 58  GVDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             D      AE +++AA R  HV  +IRPAL +G  +L DRF  S+ AYQG         
Sbjct: 62  PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
           +  L++I+   ++PD T  L+L V+  L R   R + R E+  +D+  R
Sbjct: 122 IQQLEQIATAGLVPDLTFWLELSVEESLVRRDARSNDRIEAEGVDFLTR 170


>gi|18312312|ref|NP_558979.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2]
 gi|23821790|sp|Q8ZY35|KTHY_PYRAE RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|18159759|gb|AAL63161.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2]
          Length = 192

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 26/211 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFGA 64
           F++ EGI+G+GK+T ISLL++ L R    V+ TREP   P     +   L  G VD    
Sbjct: 3   FVAIEGIDGSGKSTVISLLEKKLPR----VYATREPSSGPIGRLIKEWALKGGSVD---P 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSLQE 122
             +A++FAA R++H +  I P + EG I++ +R+++SS AYQG    S+    +++SL  
Sbjct: 56  HVDALLFAADRIEHYKREIEPRVREGYIVISERYIESSIAYQGAAGVSREFVKYINSLVP 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD TIILD+   I   R++ R    +   L +          K R+I+L  AR
Sbjct: 116 ------KPDLTIILDVDPSIAEARIRQRGGAEKYEYLSFL--------RKVREIYL--AR 159

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +   ++D++   + VA ++  ++  +V+
Sbjct: 160 AAEEGYPVIDASRRPEEVAADVAELIKRVVR 190


>gi|255348545|ref|ZP_05380552.1| thymidylate kinase [Chlamydia trachomatis 70]
 gi|255503085|ref|ZP_05381475.1| thymidylate kinase [Chlamydia trachomatis 70s]
 gi|255506763|ref|ZP_05382402.1| thymidylate kinase [Chlamydia trachomatis D(s)2923]
 gi|289525226|emb|CBJ14702.1| thymidylate kinase [Chlamydia trachomatis Sweden2]
 gi|296434774|gb|ADH16952.1| thymidylate kinase [Chlamydia trachomatis E/150]
 gi|296438494|gb|ADH20647.1| thymidylate kinase [Chlamydia trachomatis E/11023]
          Length = 203

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 99/191 (51%), Gaps = 9/191 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG GKT  I  L + L  +  ++  TREPGG    ++ R +LL     +   
Sbjct: 1   MFIVVEGGEGGGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDPE-QKISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
            AE ++F AAR  H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    
Sbjct: 60  YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +  +PD T +LD+P   GL R   +        LD FE+K  + H+  R+ FL +A 
Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173

Query: 183 NQPDRCHIVDS 193
             PDR  ++D+
Sbjct: 174 KAPDRYKVLDA 184


>gi|229100819|ref|ZP_04231634.1| Thymidylate kinase [Bacillus cereus Rock3-28]
 gi|228682586|gb|EEL36648.1| Thymidylate kinase [Bacillus cereus Rock3-28]
          Length = 174

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 10/174 (5%)

Query: 38  TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
           TREPGG   +E  R +L         A  EA+++AAAR  H+   + PAL E  ++LCDR
Sbjct: 3   TREPGGIAISEDIRTILHKQEYTMMEARTEALLYAAARRQHLVEKVMPALNENYLVLCDR 62

Query: 98  FLDSSYAYQGERDSSQHLFLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           F+DSS AYQG    ++ L +D + EI   + ++ MP  TI LD+  ++GL R++ + + R
Sbjct: 63  FIDSSLAYQG---YARGLGMDKVFEINRFATEDCMPSVTIYLDIEPEVGLARIE-KDAGR 118

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           E   LD    +D+  H++ R+ +L +     DR  +V++    + +   ++ I+
Sbjct: 119 EVNRLDM---EDISFHKRVREGYLQVVERFSDRIVLVNADQPMEKLIEEVVQII 169


>gi|87301810|ref|ZP_01084644.1| Thymidylate kinase [Synechococcus sp. WH 5701]
 gi|87283378|gb|EAQ75333.1| Thymidylate kinase [Synechococcus sp. WH 5701]
          Length = 224

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 92/168 (54%), Gaps = 7/168 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58
           G F+  EGI+G+GK++ +  L  +L R         +  +REPGGTP  +  R +LL   
Sbjct: 9   GRFLVLEGIDGSGKSSQLERLAAWLPRSGLMPAGASLVTSREPGGTPLGQGLRQLLLHPP 68

Query: 59  VDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            +    A AE +++AA R  HV+++I PAL  G  +L DRF  S+ AYQG         +
Sbjct: 69  EEAAPVARAELLLYAADRAQHVQSLIEPALAAGHWVLSDRFAGSTAAYQGHGRGLSLDLI 128

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
           D L+ I+   + PD T+ LDLP+ I   R  +R + R E+A L + ER
Sbjct: 129 DQLEAIATGGLSPDLTLWLDLPLAISADRRGHRGADRIEAAGLPFLER 176


>gi|325967673|ref|YP_004243865.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28]
 gi|323706876|gb|ADY00363.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28]
          Length = 199

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 13/204 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++ EGI+G GK+T IS+L++ L+   Y V+ T EP  +P     R  LL    +    
Sbjct: 1   MFVAVEGIDGVGKSTVISMLRKKLESNGYRVYTTAEPSQSPIGRLIRDWLLKPSSNAAHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++F A R+ H    ++P L  G +++ +R+++S+ AYQG     Q    + L E+ 
Sbjct: 61  SIFALLFTADRVQHYYGEVKPKLDSGYLVITERYMESTLAYQGAMGLPQ----EWLMELH 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD TIILD P++  + R+ NR   RE   L+ FE     + + R   FL + R  
Sbjct: 117 RFVPRPDLTIILDAPIETVIGRLSNR---RE---LEVFEVNKEFLSKVRE--FL-LRRAS 167

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            +   ++++    +S+  +I  ++
Sbjct: 168 TNNYPVINADRDLESIVNDIYELI 191


>gi|117621308|ref|YP_856780.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|254808271|sp|A0KKH9|KTHY_AERHH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|117562715|gb|ABK39663.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 213

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG+EGAGK++ +  +  +L       +  TREPGGTP AE  R ++     +    
Sbjct: 4   FIVIEGLEGAGKSSAVRYVADYLHGHGVARIECTREPGGTPLAERMRAIVKEVHDERLTI 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE ++  A+R+  VE  I+PAL +G  ++ DR   SS AYQG         + +++   
Sbjct: 64  EAELLLMYASRVQLVETRIKPALADGIWVVGDRHDLSSQAYQGGGRGIDANLIGAIKRAV 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           + +  PD T+ LD+   IGL+R ++R        LD  E + +   E+ RQ +L++A   
Sbjct: 124 LGDFKPDLTLYLDIDPAIGLQRARHR------GELDRIELEQLSFFERTRQRYLELAAAD 177

Query: 185 PDRCHIVDSAHSFQSVATNI 204
            +   ++D+  + + V   I
Sbjct: 178 -ESIKVIDAGQAPEQVKAAI 196


>gi|167972275|ref|ZP_02554552.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|167974298|ref|ZP_02556575.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|167975305|ref|ZP_02557582.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|167988964|ref|ZP_02570635.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|168362382|ref|ZP_02695561.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|198273573|ref|ZP_03206109.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554298|ref|YP_002284433.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550427|ref|ZP_03771376.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
 gi|225551319|ref|ZP_03772265.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
 gi|171903215|gb|EDT49504.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209431|gb|EDU06474.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018690|gb|EDU56730.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998196|gb|EDU67293.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660019|gb|EDX53399.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198250093|gb|EDY74873.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541799|gb|ACI60028.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379134|gb|EEH01499.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
 gi|225379581|gb|EEH01943.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
          Length = 229

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 12/199 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSCGV 59
           GLFI FEGI+GAGKT+ +  L   L+       + +TREPGG    AAE  R   L   +
Sbjct: 15  GLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK-NL 73

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           + F     A ++A++R +HV+  I P L +G I++ DRF+ SSY YQG   +     +  
Sbjct: 74  EAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVIHH 133

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++  +  D     D+ V+  L R++NR+        + F+ ++   +EK  + +  
Sbjct: 134 VNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQYPS 188

Query: 180 I--ARNQPDRCHIVDSAHS 196
           +  A NQP +   +D+  S
Sbjct: 189 VFNAYNQPKKIIFIDANKS 207


>gi|195867423|ref|ZP_03079427.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|195660899|gb|EDX54152.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
          Length = 230

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 12/199 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSCGV 59
           GLFI FEGI+GAGKT+ +  L   L+       + +TREPGG    AAE  R   L   +
Sbjct: 16  GLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK-NL 74

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           + F     A ++A++R +HV+  I P L +G I++ DRF+ SSY YQG   +     +  
Sbjct: 75  EAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVIHH 134

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++  +  D     D+ V+  L R++NR+        + F+ ++   +EK  + +  
Sbjct: 135 VNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQYPS 189

Query: 180 I--ARNQPDRCHIVDSAHS 196
           +  A NQP +   +D+  S
Sbjct: 190 VFNAYNQPKKIIFIDANKS 208


>gi|262366245|gb|ACY62802.1| thymidylate kinase [Yersinia pestis D182038]
          Length = 190

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 10/173 (5%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 12  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 70

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL R + R 
Sbjct: 71  WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 129

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
                  LD  E++ +   E+ R  +L++A +       +D++   + V+ +I
Sbjct: 130 -----GELDRIEQESLAFFERTRARYLELAASDAS-IKTIDASQPIEQVSASI 176


>gi|254425294|ref|ZP_05039012.1| thymidylate kinase [Synechococcus sp. PCC 7335]
 gi|196192783|gb|EDX87747.1| thymidylate kinase [Synechococcus sp. PCC 7335]
          Length = 237

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 28/201 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-QRKNYD----------VHVTREPGGTPAAEAARH 52
           G  I FEG EG GKTT +  L  ++ Q K++           V +TREPGGT   +  R 
Sbjct: 3   GKLIVFEGGEGCGKTTQLQRLYDWIVQNKSWQLLLSKGHVAGVKMTREPGGTVLGKQLRQ 62

Query: 53  VLLSC-----------GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS 101
           +LL+             +     +AE +++AA R  HVE V+ P L  G  +LCDR++DS
Sbjct: 63  LLLNESKLNEPRSANDALTPVTNKAELLLYAADRAQHVEEVLLPWLEAGYWVLCDRYIDS 122

Query: 102 SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           + AYQG         + +L +I+   +  D T+ L++P ++GL R      +R     D 
Sbjct: 123 TVAYQGYGRQLDLSLITTLNQIATAGLRGDLTLWLNVPPEVGLDR------MRARGQADR 176

Query: 162 FERKDVMIHEKRRQIFLDIAR 182
            E+  +  H++    F  +A+
Sbjct: 177 IEQASMAFHQRVHDGFAMLAK 197


>gi|158312172|ref|YP_001504680.1| dTMP kinase [Frankia sp. EAN1pec]
 gi|158107577|gb|ABW09774.1| dTMP kinase [Frankia sp. EAN1pec]
          Length = 709

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 76/233 (32%), Positives = 108/233 (46%), Gaps = 29/233 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+ EG  GAGKTT + LL+ +L     +V    E  GT      R  LL    + 
Sbjct: 466 HGGLFITVEGAAGAGKTTQLELLRSWLSSSGREVVPAYETDGTSLGAGLRD-LLDDPANR 524

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDS 119
             A  E ++ AA R +HV  VI PAL  G I+L DR++DS+ A Q  G+R  S  L +  
Sbjct: 525 LHARTELLLDAADRAEHVARVIEPALARGAIVLTDRYVDSAIACQALGQRIDSDELTV-- 582

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL-RES-----------------ACLDY 161
           L + +   ++PD TI+LDLP +  L R  +   L RES                      
Sbjct: 583 LTQWASHSLLPDVTILLDLPAEQALARGGSDPHLGRESEGDGSGHDGGAGRGGGAGHGAG 642

Query: 162 FERKD------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +R        V  H + R+ F  +A   PDR  I+D+  S Q +   I  ++
Sbjct: 643 PDRSGTDPVAAVAYHRRVREHFRRLADEDPDRHVILDATLSPQELHRQIRAVI 695


>gi|257471409|ref|ZP_05635408.1| thymidylate kinase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|311086090|gb|ADP66172.1| thymidylate kinase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311086664|gb|ADP66745.1| thymidylate kinase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
           pisum)]
 gi|311087767|gb|ADP67846.1| thymidylate kinase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 219

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 11/211 (5%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEA 66
            EG+EGAGKT     +K  L++ +  +V + R+PG TP AE  R ++      D    E 
Sbjct: 16  IEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKET 75

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E ++  AAR+  VE  I+PAL  G  ++ DR   SS AYQG         +  LQ + + 
Sbjct: 76  ELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFLN 135

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
             +PD TI LD+  +IGL R   R        LD  E + +   +K R+ +L+  +++ D
Sbjct: 136 NFIPDLTIYLDVSPEIGLARALKRNP------LDLIESRSLFFFKKTRRCYLE--KSKLD 187

Query: 187 RCHIVDSAH-SFQSVATNILNIVWELVQKRV 216
           +  I+ +A+ + + V  NI   +   + K+V
Sbjct: 188 KKTIIINANLNIKKVTQNITKKMLNWLNKQV 218


>gi|87125181|ref|ZP_01081027.1| Thymidylate kinase [Synechococcus sp. RS9917]
 gi|86166950|gb|EAQ68211.1| Thymidylate kinase [Synechococcus sp. RS9917]
          Length = 217

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 8/193 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLL 55
           +  G  +  EGI+G GKTT +  L  +L              TREPGGT   +A R +LL
Sbjct: 3   IQRGRLLVLEGIDGCGKTTQMEHLATWLPVSGLMPSTARLIQTREPGGTALGQALRGLLL 62

Query: 56  SCGVDEFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                        ++ +AA R  HV  VIRPAL  G  +L DRF  S+ AYQG       
Sbjct: 63  HPPEAAAPEAVAELLLYAADRAQHVAQVIRPALERGDWVLSDRFTGSTMAYQGFGRQLDQ 122

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER-KDVMIHEK 172
             +  L  I+   + PD T+ L LPV + ++R   R + R E++ LD+ +R  D    + 
Sbjct: 123 ALIRQLALIATGGLTPDLTVWLSLPVAVSVERRGGRRADRIEASGLDFLQRVADGFAAQA 182

Query: 173 RRQIFLDIARNQP 185
             Q +L++  ++P
Sbjct: 183 AEQGWLEVRADRP 195


>gi|301167072|emb|CBW26651.1| putative thymidylate kinase (dTMP kinase) [Bacteriovorax marinus
           SJ]
          Length = 229

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 17/217 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F+SFEGIEGAGK+T I   K +L+ + + V + REPGGTP  E  R  +L+    E   
Sbjct: 21  FFLSFEGIEGAGKSTQIISAKEYLESQGFRVLILREPGGTPFGEKLRQAILNSK-SELEP 79

Query: 65  EAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120
            +EA +FA++R   +  V    L   G +++ DR+LDSS AYQG    ++ L +D   ++
Sbjct: 80  ISEAYLFASSRAQLLTEVTLKELNTPGTVVIYDRYLDSSIAYQG---IARGLGVDNILNI 136

Query: 121 QEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             +    ++P  T  L +  +   G +RV+N       A  DYFE +    ++   Q + 
Sbjct: 137 HNVFPLNLIPHKTFYLKISTETSFGRQRVRN-------APKDYFESRGKDFYDNLVQGYE 189

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                 P+R  ++D   S   V  +I   +  L+ KR
Sbjct: 190 LSCELFPERISVIDGNRSLDDVFADIKEELNHLIFKR 226


>gi|325290200|ref|YP_004266381.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965601|gb|ADY56380.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271]
          Length = 210

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 97/168 (57%), Gaps = 14/168 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FI  EG +G+G +T  +LLKR+++ K+   V + +EP   P     R VL +  V  
Sbjct: 7   SGKFIVLEGTDGSGISTQSALLKRYIENKHGKKVLLAKEPSEGPIGTLIRQVL-THRVQG 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E+  ++FAA R+DH+++ I PAL +G +++CDR++ SS+AYQG +   Q +      
Sbjct: 66  IREESLTLMFAADRMDHLQHKIIPALEQGALVICDRYVWSSFAYQGIKIDEQWIL----- 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVM 168
           E +   + PD TI + +   + ++R+ QNR+       +D FE++ ++
Sbjct: 121 ETNKYALKPDLTIFVKVRPQVSMERIRQNRFQ------IDVFEQEVIL 162


>gi|269792630|ref|YP_003317534.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100265|gb|ACZ19252.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 205

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GLF++ EG++G+GKTT  S L  ++  +    V  TREPGG    +  R +LL  G 
Sbjct: 1   MPRGLFVTIEGVDGSGKTTQASKLASWIGDQLGRRVLWTREPGGW-GDDGIREMLLKGGW 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              G   E ++F A R +H   VI PAL EG++++C+R+ DS+ AYQ        L L+ 
Sbjct: 60  Q--GPYTETLLFLADRCEHCARVIGPALEEGRVVICERYQDSTLAYQA---FGSGLGLED 114

Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
           L  IS    +  PD TI LDL  +    R+ +R  +   ES  +D+F R
Sbjct: 115 LDRISSVLALPRPDVTIWLDLGPEEAALRLSSRGGMDAIESRGMDFFAR 163


>gi|311087248|gb|ADP67328.1| thymidylate kinase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 219

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 11/211 (5%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEA 66
            EG+EGAGKT     +K  L++ +  +V + R+PG TP AE  R ++      D    E 
Sbjct: 16  IEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKET 75

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E ++  AAR+  VE  I+PAL  G  ++ DR   SS AYQG         +  LQ + + 
Sbjct: 76  ELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFLN 135

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
             +PD T+ LD+  +IGL R   R        LD  E + +   +K R+ +L+  +++ D
Sbjct: 136 NFIPDLTVYLDVSPEIGLARALKRNP------LDLIESRSLFFFKKTRRCYLE--KSKLD 187

Query: 187 RCHIVDSAH-SFQSVATNILNIVWELVQKRV 216
           +  I+ +A+ + + V  NI   +   + K+V
Sbjct: 188 KKTIIINANLNIKKVTQNITKKMLNWLNKQV 218


>gi|288932600|ref|YP_003436660.1| thymidylate kinase [Ferroglobus placidus DSM 10642]
 gi|288894848|gb|ADC66385.1| thymidylate kinase [Ferroglobus placidus DSM 10642]
          Length = 204

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 25/215 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+ EGI+GAGKTT  + ++  L +      V +EP      E     ++      F  E
Sbjct: 3   LIAVEGIDGAGKTTIANFVREELLKLGIPAIVLKEP-----TEGKYGKIIKESEKRFDPE 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E  +F   R + VE  I PAL +G  ++ DR+  SS AYQG R       LD  + + V
Sbjct: 58  KELELFILDRKEDVEKNILPALNKGISVIMDRYYYSSVAYQGARG------LDPEEILKV 111

Query: 126 QEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            E +   PD TIILD+  +I LKR++NR  L     L+Y         +K R+IFL I R
Sbjct: 112 NESIAPVPDLTIILDVEPEIALKRIKNRKKLTPFEELEYL--------KKVREIFLSIKR 163

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +     +VD++ S + V   ++  V EL+  R S
Sbjct: 164 PE---IRVVDASKSLEEVKDEVIYHVLELLSSRGS 195


>gi|77407435|ref|ZP_00784304.1| thymidylate kinase [Streptococcus agalactiae H36B]
 gi|77173956|gb|EAO76956.1| thymidylate kinase [Streptococcus agalactiae H36B]
          Length = 117

 Score = 92.8 bits (229), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 1/108 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
            +   + E +++ AAR  H+   + PAL E +I+L DRF+DSS AYQG
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEREIVLMDRFIDSSVAYQG 108


>gi|123351693|ref|XP_001295357.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
 gi|121874114|gb|EAX82427.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
          Length = 202

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 12/207 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GK+T  +L+   L + N +   TREPGGT  +E  R ++L   ++E   
Sbjct: 3   VFITFEGPDGSGKSTICNLVYDELIKNNIETIKTREPGGTRISEKIRDIILDKDLNEMDM 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++++A+R  H    I PAL +G  +LC+R++ SS AYQG     +   + ++ + +
Sbjct: 63  RTEALLYSASRAQHTYEKIIPALEDGITVLCERYVLSSLAYQGHARGQKLEDIRAINDFA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLDIARN 183
                PD   I          R  N    R + AC D  E +    H+K R  + D+ + 
Sbjct: 123 TGGKNPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNDLEK- 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
                + +D   + + V  + + I+ E
Sbjct: 173 -EGNYYFIDVNQTIEEVFGDCMKILKE 198


>gi|13357576|ref|NP_077850.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|6898965|gb|AAF30425.1|AE002101_8 thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
          Length = 233

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 24/205 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGG--TPAAEAARHV 53
           +  GLFI FEGI+GAGKT   S+LK+ L+     +    + +TREPGG    AAE  R  
Sbjct: 16  LKKGLFIVFEGIDGAGKT---SILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREF 72

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            L   ++ F     A ++A++R +HV+  I P L +  I++ DRF+ SSY YQG     Q
Sbjct: 73  FLK-NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQG---IVQ 128

Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           +  LD + +I+ Q   E+  D     D+ V+  L R++NR+        + F+ ++   +
Sbjct: 129 NQSLDVIYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFY 183

Query: 171 EKRRQIFLDIAR--NQPDRCHIVDS 193
           EK  + +  + +  NQP +   +D+
Sbjct: 184 EKLLKQYPSVFKVYNQPKKIIFIDA 208


>gi|167971144|ref|ZP_02553421.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|170762140|ref|YP_001752100.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171916060|ref|ZP_02931503.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|183508501|ref|ZP_02958029.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|14285521|sp|Q9PRC5|KTHY_UREPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030845|sp|B1AI06|KTHY_UREP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|168827717|gb|ACA32979.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171902601|gb|EDT48890.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|182675929|gb|EDT87834.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186700962|gb|EDU19244.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 230

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 24/205 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGG--TPAAEAARHV 53
           +  GLFI FEGI+GAGKT   S+LK+ L+     +    + +TREPGG    AAE  R  
Sbjct: 13  LKKGLFIVFEGIDGAGKT---SILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREF 69

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            L   ++ F     A ++A++R +HV+  I P L +  I++ DRF+ SSY YQG     Q
Sbjct: 70  FLK-NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQG---IVQ 125

Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           +  LD + +I+ Q   E+  D     D+ V+  L R++NR+        + F+ ++   +
Sbjct: 126 NQSLDVIYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFY 180

Query: 171 EKRRQIFLDIAR--NQPDRCHIVDS 193
           EK  + +  + +  NQP +   +D+
Sbjct: 181 EKLLKQYPSVFKVYNQPKKIIFIDA 205


>gi|126458752|ref|YP_001055030.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
 gi|171855086|sp|A3MSE7|KTHY_PYRCJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|126248473|gb|ABO07564.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
          Length = 193

 Score = 92.4 bits (228), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 20/204 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G+GKTT I+ + + L R    V+VTREP G P     +   L  G  +   
Sbjct: 1   MFIAVEGIDGSGKTTVIAEVAKALPR----VYVTREPSGGPIGRLLKEWALRGGTAD--P 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             +A++FAA R++H +  I P L EG I++ +R+++SS AYQG    +  + ++ +  I+
Sbjct: 55  HVDALLFAADRVEHYKREIEPKLREGYIVITERYVESSIAYQG----AAGVPIEYILYIN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                P  TIILD+     +KR++ R        L+ FE  DV    + R+I+L  AR +
Sbjct: 111 SVVPRPHLTIILDVDPAEAIKRIKARER------LEKFE--DVEFLRRVREIYLTRARAE 162

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                ++D+      VA +++ I+
Sbjct: 163 --GYPVIDAGRPAGEVAKDVVAII 184


>gi|255624824|ref|XP_002540531.1| Thymidylate kinase, putative [Ricinus communis]
 gi|223495133|gb|EEF21852.1| Thymidylate kinase, putative [Ricinus communis]
          Length = 127

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 73/112 (65%), Gaps = 2/112 (1%)

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           +DSS  YQG   + +  F+++LQ ++V  V+PDCT+ILD+P +IGL+R + R S   +  
Sbjct: 1   MDSSRVYQGVTGNLEPDFIEALQRVAVNGVVPDCTLILDIPAEIGLERARRRASAAAAP- 59

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            D FE++++  HEKRR+ FLDIA   P RCH++D+     ++A  I  I+ E
Sbjct: 60  -DRFEKEEMQTHEKRREAFLDIAARDPGRCHVIDAQRPEDAIADEIAGIIEE 110


>gi|270156732|ref|ZP_06185389.1| thymidylate kinase [Legionella longbeachae D-4968]
 gi|289164821|ref|YP_003454959.1| thymidylate kinase [Legionella longbeachae NSW150]
 gi|269988757|gb|EEZ95011.1| thymidylate kinase [Legionella longbeachae D-4968]
 gi|288857994|emb|CBJ11854.1| putative thymidylate kinase [Legionella longbeachae NSW150]
          Length = 212

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 3/164 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62
           G  I  EG+EGAGK+T ++ +   L  +      TREPGGT   E  R+++ +    D  
Sbjct: 6   GKLIVIEGLEGAGKSTAVNTVVDLLAERQIKTITTREPGGTAIGEILRNLIKNPEYRDVL 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++   AR+  ++ VI PAL +G  ++ DRF  S+ AYQG         +  L  
Sbjct: 66  DDRSELLLLYTARIQLLKQVIEPALQKGMWVIADRFELSTMAYQGGGRGLDQEMIRHLSS 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
            S+Q + PD T+ LD+  + G++RV++R +L   E   +++F R
Sbjct: 126 FSLQGLKPDLTLYLDISPEEGMRRVKSRGTLDRIEQQSIEFFHR 169


>gi|108758316|ref|YP_631609.1| thymidylate kinase [Myxococcus xanthus DK 1622]
 gi|50404253|gb|AAT76867.1| serine/threonine kinase Pkn2 associate protein 1 [Myxococcus
           xanthus]
 gi|108462196|gb|ABF87381.1| thymidylate kinase [Myxococcus xanthus DK 1622]
          Length = 221

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 16/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCG 58
           G FI  EG++GAG TT +  L   L+ + + V  TREP   P     R  L     L  G
Sbjct: 14  GRFIVLEGLDGAGTTTQVERLAAALRAEGHSVLTTREPSDGPVGTMIRQALTGRLGLPGG 73

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 E  A++FAA R DH+   + PAL  G+I+LCDR++ SS AYQG       L ++
Sbjct: 74  AGPLAPETLALLFAADRTDHLTARVLPALAAGQIVLCDRYVLSSLAYQG-----ASLPME 128

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            ++ ++   V PD T+ + +  ++  +R + R         + FE  +      ++ +  
Sbjct: 129 WVEAVNACAVSPDLTLFVGVAPEVAARRRKAR-----GGAAELFEADEAQRRIAKQYVAA 183

Query: 179 DIARNQPDRCHIVDSAHSFQSV-ATNILNIVWELVQKR 215
              R + +R   +D     ++V A +++ I   L +KR
Sbjct: 184 IRRREKHERIVHIDGEQGIEAVTAASLVEIRKLLARKR 221


>gi|238749664|ref|ZP_04611169.1| Thymidylate kinase [Yersinia rohdei ATCC 43380]
 gi|238712319|gb|EEQ04532.1| Thymidylate kinase [Yersinia rohdei ATCC 43380]
          Length = 191

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 10/183 (5%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 12  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 70

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + +  PD T+ LDLP  +GL R + R 
Sbjct: 71  WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGDFRPDLTLYLDLPPAVGLARARAR- 129

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                  LD  E++ +   E+ R  +L++A         VD++   + V+ +I  ++ + 
Sbjct: 130 -----GELDRIEQESLAFFERTRARYLELAAAD-STIKTVDASQPLEQVSESIRQVLQQW 183

Query: 212 VQK 214
           + +
Sbjct: 184 LAR 186


>gi|71274567|ref|ZP_00650855.1| Thymidylate kinase [Xylella fastidiosa Dixon]
 gi|71898106|ref|ZP_00680292.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|71901337|ref|ZP_00683432.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|170730823|ref|YP_001776256.1| thymidylate kinase [Xylella fastidiosa M12]
 gi|254808316|sp|B0U447|KTHY_XYLFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71164299|gb|EAO14013.1| Thymidylate kinase [Xylella fastidiosa Dixon]
 gi|71728881|gb|EAO31017.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|71732080|gb|EAO34136.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|167965616|gb|ACA12626.1| dTMP kinase [Xylella fastidiosa M12]
          Length = 217

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F 
Sbjct: 9   GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAATGRFS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  V    R  HVE++I P +  G +++ DR+  S  AYQG    +  L +D+L E 
Sbjct: 66  PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL  A  
Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALE 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209


>gi|327399958|ref|YP_004340797.1| Thymidylate kinase [Archaeoglobus veneficus SNP6]
 gi|327315466|gb|AEA46082.1| Thymidylate kinase [Archaeoglobus veneficus SNP6]
          Length = 190

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 18/206 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G GKTT    LK  L+++ Y+V + +EP  +   E  R +  S       A
Sbjct: 1   MLIAIEGIDGVGKTTIAKFLKEELEKRGYEVVLLKEPTNS---EWGRKIKASLN-KRLSA 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  +F   R  +VE+ I PAL +GKI++ DR+  S+ AYQ  R           +EI+
Sbjct: 57  EEELELFILDRKYNVEHNILPALKQGKIVIMDRYYYSNIAYQAARGLDAERIKRINEEIA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +   PD  I+LD P +I L+R+  R  +  S     FE  + +  +K R+IF    ++ 
Sbjct: 117 PR---PDIVILLDAPPEICLERIMERGEIPNS-----FEDPEYL--KKVREIF----KSL 162

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
            D   IVD++ S   V  ++L IV E
Sbjct: 163 KDNVVIVDASKSIDEVKKDVLRIVLE 188


>gi|319760533|ref|YP_004124471.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039247|gb|ADV33797.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF]
          Length = 211

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 9/201 (4%)

Query: 6   FISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           FI  EG++G+GKTT +S +++ F      ++    EPGGT  +++ R ++ +  +DE   
Sbjct: 5   FIVVEGLDGSGKTTIVSKIVQYFNNNNITNLITVHEPGGTKISDSLRFLIKNGAIDESIT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR   +EN+++PAL +G  ++ DRF  SS+AYQG        FL  L + 
Sbjct: 65  NMTEVLMLYAARSQLLENIVKPALTKGDWVIGDRFDLSSFAYQGGGRGVDEFFLYLLSKS 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  + P     LD+  +I L RV+NR        LD  E++ +    K R+ +  +A  
Sbjct: 125 VINNLFPHLIFYLDIAPEISLLRVKNR------DKLDRIEKEPLSFFYKVREYYKKVAAI 178

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
           Q +   I ++  S + V+ +I
Sbjct: 179 QKNIITI-NANQSLEIVSRSI 198


>gi|94676700|ref|YP_588872.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|166221720|sp|Q1LT42|KTHY_BAUCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|94219850|gb|ABF14009.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 212

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 5/171 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG+EGAGKT+ I  +   L     +++  TR+PGGTP AE  R ++      E+  
Sbjct: 5   FIVIEGLEGAGKTSVIQQIITILHSNGIHNIISTRDPGGTPLAETIRDIIKKGMNGEYIT 64

Query: 65  E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  E ++  AAR   V  VI+PALM G  ++ DR+  SS AYQG         L +L++ 
Sbjct: 65  DYTELLLLYAARTQLVAQVIKPALMSGTWVISDRYDLSSQAYQGGGRGIDIRLLQNLRDA 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR---YSLRESACLDYFERKDVMIHE 171
           ++ +  PD TI LDLP      R++ R       E   L +F+R  +   E
Sbjct: 125 ALGKFYPDLTIYLDLPPSKCRARIRARGIPLDRIEMESLSFFQRTSIRYRE 175


>gi|260767879|ref|ZP_05876813.1| thymidylate kinase [Vibrio furnissii CIP 102972]
 gi|260615909|gb|EEX41094.1| thymidylate kinase [Vibrio furnissii CIP 102972]
          Length = 209

 Score = 92.0 bits (227), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  +I  EG+EGAGK+T I  +   L      D+  TREPGGT  AE  R ++     
Sbjct: 1   MNSK-YIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59

Query: 60  DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E   +  E ++  AAR+  VENVI+PAL +   ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDMTELLLMYAARVQLVENVIKPALQQRHWVVGDRHDMSSQAYQGGGRQIARETMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A    +    +++  S + V  +I
Sbjct: 174 ELAAG-DESVVTINAEQSIEQVTHDI 198


>gi|219852653|ref|YP_002467085.1| thymidylate kinase [Methanosphaerula palustris E1-9c]
 gi|219546912|gb|ACL17362.1| dTMP kinase [Methanosphaerula palustris E1-9c]
          Length = 209

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 21/194 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGK++ +  LK  L   + D   TREPG T   E+ R  +     +E   
Sbjct: 2   VLITIEGIDGAGKSSLVRRLKHSL--ADLDPIFTREPGSTWIGESVRRGI----AEEIDP 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDSSQHLFLDS 119
            AEA++FAA    H+  VIRP L + ++++ DR++DS YAYQ     G            
Sbjct: 56  VAEALLFAADHAAHIARVIRPGLAKNRVIISDRYVDSRYAYQSVMLKGVLPDPGTWLRQV 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            Q  S   + PD T ++ LPV   L R+      +E     +FE+  V+  E  +Q +L 
Sbjct: 116 HQHWS---IAPDLTFLMVLPVGTALARITRGRPKKE-----HFEQTAVL--EAVQQQYLA 165

Query: 180 IARNQPDRCHIVDS 193
           +AR +P R  ++D+
Sbjct: 166 LARAEPSRFVVIDA 179


>gi|320102453|ref|YP_004178044.1| thymidylate kinase [Isosphaera pallida ATCC 43644]
 gi|319749735|gb|ADV61495.1| thymidylate kinase [Isosphaera pallida ATCC 43644]
          Length = 224

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 14/185 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGV 59
           +G FI  EG +G+GK+T  SLL ++L+     +   R+PGGT   +  R +LL    C +
Sbjct: 12  AGRFIVLEGPDGSGKSTQASLLAQWLRDAGVPLTTCRDPGGTRLGDRLRSILLDRHDCAI 71

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D      E +++ A R   V   IRPAL +G  +L DRFL S++ YQ             
Sbjct: 72  D---MTTELLLYMAGRAQLVRERIRPALDQGHWVLSDRFLMSNWVYQCFAGGVDDRVFHQ 128

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E++V   +PD T++LDL ++  L R             D  E +     ++ RQ FL+
Sbjct: 129 VAEVAVGSTLPDLTLVLDLELETALART--------GGARDRIEDRSWEYRQRVRQGFLE 180

Query: 180 IARNQ 184
            ++ +
Sbjct: 181 ASKRR 185


>gi|238762196|ref|ZP_04623168.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638]
 gi|238699543|gb|EEP92288.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638]
          Length = 191

 Score = 91.7 bits (226), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 14/186 (7%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 12  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 70

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  +    PD T+ LDLP  +GL R + R 
Sbjct: 71  WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGAFRPDLTLYLDLPPVVGLARARARG 130

Query: 152 SLR--ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            L   E   LD+FER         R  +L++A         +D++   + V+ +I  ++ 
Sbjct: 131 ELDRIEQESLDFFERT--------RARYLELAAADSS-IKTIDASQPLEQVSESISRVLK 181

Query: 210 ELVQKR 215
           + + +R
Sbjct: 182 QWLTRR 187


>gi|15837182|ref|NP_297870.1| thymidylate kinase [Xylella fastidiosa 9a5c]
 gi|9105444|gb|AAF83390.1|AE003904_11 thymidylate kinase [Xylella fastidiosa 9a5c]
          Length = 217

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F 
Sbjct: 9   GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  V    R  HVE++I P +  G +++ DR+  S  AYQG    +  L +D+L E 
Sbjct: 66  PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL  A  
Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALE 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 173 LPSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 209


>gi|6066862|emb|CAB58188.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066864|emb|CAB58189.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066866|emb|CAB58190.1| thymidylate kinase [Yersinia enterocolitica]
          Length = 165

 Score = 91.7 bits (226), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 9/150 (6%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 16  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  IGL R + R 
Sbjct: 75  WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPAIGLARARAR- 133

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  LD  E++ +   E+ R+ +L++A
Sbjct: 134 -----GELDRIEQESLAFFERTRERYLELA 158


>gi|284161466|ref|YP_003400089.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
 gi|284011463|gb|ADB57416.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
          Length = 199

 Score = 91.3 bits (225), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G+GKTT +  L   L+++ YDV   +EP  +   +  R +L    +     
Sbjct: 1   MLIAVEGIDGSGKTTIVRFLVEELKKRGYDVVAFKEPTDSEYGKKIRQILKERKI---SP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  +F   R  +V N I PAL  GK+++ DR+  S+ AYQG    +  L +  ++ ++
Sbjct: 58  EEELKLFIKDREFNVRNNILPALKSGKVVIMDRYYYSTIAYQG----ALGLDIGKIKTLN 113

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q   PD  IILD+  +  LKR++ +         D FE  D+    K R IFL +  N 
Sbjct: 114 EQFPKPDLVIILDVSPETALKRIKAKRK------PDRFE--DLEYLRKVRNIFLSLKNN- 164

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                ++D+    + V  ++L +V E ++K
Sbjct: 165 ---IVVIDAERDIEEVKRDVLKVVLEHLEK 191


>gi|213969786|ref|ZP_03397921.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1]
 gi|301382862|ref|ZP_07231280.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13]
 gi|302062832|ref|ZP_07254373.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40]
 gi|302131340|ref|ZP_07257330.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925594|gb|EEB59154.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1]
          Length = 119

 Score = 91.3 bits (225), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 66/101 (65%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF ++ +
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTNNLF 102


>gi|282855443|ref|ZP_06264764.1| dTMP kinase [Pyramidobacter piscolens W5455]
 gi|282586739|gb|EFB91986.1| dTMP kinase [Pyramidobacter piscolens W5455]
          Length = 201

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 11/203 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G+GK+T    L   L+R+   V  T EPG  P  +  R +LL+  +     
Sbjct: 1   MFITIEGIDGSGKSTQARRLAARLRREGKKVTETHEPGDWPHGDILRALLLNGRLRH--P 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123
             E ++F A R +HV  VI+PAL +G+ ++CDR+ DS+ AYQ      +   L+SL +  
Sbjct: 59  MTEIMLFVADRCEHVAQVIQPALDQGEFVVCDRYNDSTRAYQCWGRGLKEDILESLIKWC 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + E  PD T+ LDLPV+   KR+  R         D  E +D+  HE   + F ++A  
Sbjct: 119 GIPE--PDLTVWLDLPVEEARKRMAGR------GGSDRIEGEDLKFHEAVARGFKELAER 170

Query: 184 QPDRCHIVDSAHSFQSVATNILN 206
              R   VD+      +   I +
Sbjct: 171 NGSRFFRVDARAGEDEIEETIFS 193


>gi|26554269|ref|NP_758203.1| thymidylate kinase [Mycoplasma penetrans HF-2]
 gi|46576587|sp|Q8EUV4|KTHY_MYCPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|26454278|dbj|BAC44607.1| thymidylate kinase [Mycoplasma penetrans HF-2]
          Length = 214

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           ++ GLF++FEG +  GK+T   L    L  F   K+  V +TREPGGT   E  R +L++
Sbjct: 3   LDKGLFVAFEGPDACGKSTVSKLVYQKLINFFNNKD-SVILTREPGGTEVGEKIREILVN 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D      EA++FAA+R +HV NVI  A    KI+LCDRF+ SS  YQG   +  +  
Sbjct: 62  YDID---PRTEALLFAASRTEHVWNVILKAKANKKIILCDRFIHSSLVYQGIVKNLGYKN 118

Query: 117 LDSLQEISVQEVMPD 131
           +  + +  + ++ PD
Sbjct: 119 VYKVNQFGISKIKPD 133


>gi|33519860|ref|NP_878692.1| thymidylate kinase [Candidatus Blochmannia floridanus]
 gi|46576471|sp|Q7VR23|KTHY_BLOFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33504205|emb|CAD83467.1| thymidylate kinase [Candidatus Blochmannia floridanus]
          Length = 211

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 4/163 (2%)

Query: 6   FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG++G+GKTT +  ++K F  +K  +V  T EPGGT  A     ++ +   +E   
Sbjct: 5   FIVVEGLDGSGKTTIVHKIVKYFYNQKITNVITTHEPGGTEIAYILSELIKNKSKNEKLT 64

Query: 65  E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           + +E ++  AAR   +ENVI+PAL +G  ++ DR   SS+AYQG       + L+ L + 
Sbjct: 65  DLSELLMLYAARSQLLENVIKPALFKGDWVIGDRCDLSSFAYQGAGRKLNSVLLNMLSQY 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164
            + +  P     LD+P ++ L R++NR  L   E   L +F R
Sbjct: 125 VINDFFPKLIFYLDIPSELVLSRIKNRKVLDRIEQESLSFFNR 167


>gi|6066870|emb|CAB58192.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066874|emb|CAB58194.1| thymidylate kinase [Yersinia enterocolitica]
          Length = 165

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 9/150 (6%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 16  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  IGL R + R 
Sbjct: 75  WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR- 133

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  LD  E++ +   E+ R+ +L++A
Sbjct: 134 -----GELDRIEQESLAFFERTRERYLELA 158


>gi|322435114|ref|YP_004217326.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9]
 gi|321162841|gb|ADW68546.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9]
          Length = 220

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 11/223 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----S 56
           M  G FI+FEG++G+GKTT + LL   L  +   V   R+PGGT   +  R VLL     
Sbjct: 1   MGRGFFITFEGLDGSGKTTQLKLLAAALTAEGRTVVSLRQPGGTALGDRIRGVLLDSRSE 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +      AE  +  A R   +  VIRPAL  G ++LCDR+ DSS AYQG         
Sbjct: 61  AALGTIAPLAELALMFADRAQAIAEVIRPALGAGAVVLCDRYTDSSEAYQGAGRELGSER 120

Query: 117 LDSLQEISVQEVMPDCTIIL--DLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKR 173
           + +L E   + + P+ T++L   L   +   R +N   ++E     + FER+    + + 
Sbjct: 121 VLALHETVCEGLWPELTVLLLPSLEASLRRARRRNTRHVKEHGTDENRFEREGDAFYGRI 180

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            + +  IA  +P R   V      +++A      VWE+V  R+
Sbjct: 181 HEAYERIAEREPGRVVAVRDDAPVEAIAGK----VWEIVAGRL 219


>gi|6066850|emb|CAB58204.1| thymidylate kinase [Yersinia pestis]
          Length = 165

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 9/150 (6%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 16  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL R + R 
Sbjct: 75  WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 133

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  LD  E++ +   E+ R  +L++A
Sbjct: 134 -----GELDRIEQESLAFFERTRARYLELA 158


>gi|6066860|emb|CAB58213.1| thymidylate kinase [Yersinia pseudotuberculosis]
          Length = 165

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 9/150 (6%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 16  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL R + R 
Sbjct: 75  WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 133

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  LD  E++ +   E+ R  +L++A
Sbjct: 134 -----GELDRIEQESLAFFERTRARYLELA 158


>gi|6066852|emb|CAB58225.1| thymidylate kinase [Yersinia pseudotuberculosis]
 gi|6066854|emb|CAB58210.1| thymidylate kinase [Yersinia pseudotuberculosis]
 gi|6066856|emb|CAB58211.1| thymidylate kinase [Yersinia pseudotuberculosis]
 gi|6066858|emb|CAB58212.1| thymidylate kinase [Yersinia pseudotuberculosis]
          Length = 165

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 9/150 (6%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 16  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL R + R 
Sbjct: 75  WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 133

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  LD  E++ +   E+ R  +L++A
Sbjct: 134 -----GELDRIEQESLAFFERTRARYLELA 158


>gi|15828523|ref|NP_325883.1| thymidylate kinase (dTMP kinase) [Mycoplasma pulmonis UAB CTIP]
 gi|23821806|sp|Q98RF7|KTHY_MYCPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|14089465|emb|CAC13225.1| THYMIDYLATE KINASE (DTMP KINASE) [Mycoplasma pulmonis]
          Length = 234

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 115/211 (54%), Gaps = 14/211 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGG--TPAAEAARHVLLSCGVD 60
           +FI+FEGI+ +GKT+ ++ LK  + +KN       T EPGG  +P  +  RH++L+   +
Sbjct: 14  MFITFEGIDASGKTSLLAKLKAHVVQKNLQGKCTFTWEPGGRKSPEIQTIRHLILNKESN 73

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA ++++AR  H++ VI P L + K++ CDRF+DSS+AYQ          +  L
Sbjct: 74  -LSPIAEAFLYSSARRIHLDKVILPNLAKNKVVFCDRFVDSSFAYQAFGRDLGFEKIKLL 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E++  +  PD T IL +  +  ++R + R         D  E+++   ++K  + + D 
Sbjct: 133 NELATDKKYPDITFILKISYEESMERRKAR-----QEDEDRLEKEENSFYQKVIKGY-DF 186

Query: 181 ARNQPD---RCHIVDSAHSFQSVATNILNIV 208
             + P+   R  ++D++ + + +  ++L I+
Sbjct: 187 LASYPEFQKRIFVIDASKNQEEIFESVLKIL 217


>gi|119872697|ref|YP_930704.1| dTMP kinase [Pyrobaculum islandicum DSM 4184]
 gi|119674105|gb|ABL88361.1| thymidylate kinase [Pyrobaculum islandicum DSM 4184]
          Length = 205

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 109/210 (51%), Gaps = 20/210 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EGI+G+GK+T I  L   L +    V+VTREP G P     +   L  G       
Sbjct: 3   FVAIEGIDGSGKSTVILQLAEMLPK----VYVTREPSGGPIGRLIKEWALKGGT--IDPH 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +A++FAA R++H +  I P + EG I++ +R+++SS AYQG    +  + +D ++ I+ 
Sbjct: 57  VDALLFAADRIEHYKREIEPKVREGYIVISERYIESSIAYQG----AAGVPIDFIKIINS 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                D TIILD+  +I + R++ R    +     + +R         R+I+L  AR + 
Sbjct: 113 AVPKADITIILDVDPEIAIARIKQRGDSEKYEHSAFLKRV--------REIYLQRAREE- 163

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               +VD++     VA ++  I+ +++  R
Sbjct: 164 -GYPVVDASRPPNVVAKDVAEIITQMLNYR 192


>gi|313887553|ref|ZP_07821236.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846431|gb|EFR33809.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 202

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG +G+GK+T  +L+   L + N     TREPGGT  +E  R ++L   + E    
Sbjct: 4   FITFEGPDGSGKSTICNLVYDELIKNNIKTIKTREPGGTRISEKIRDIILDKDLKEMDMR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++++A+R  H    I PAL +G  +LC+R++ SS AYQG     +   + ++ + + 
Sbjct: 64  TEALLYSASRAQHTYEKIIPALEDGVTVLCERYVLSSLAYQGHARGQKLEDIRAINDFAT 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
               PD   I          R  N   + ++ AC D  E +    H+K R  + ++ + +
Sbjct: 124 GGKKPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNNLEKEE 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
               + +D   + + V  + + I+ E
Sbjct: 175 --NYYFIDVNQTIEEVFGDCMKILKE 198


>gi|182682175|ref|YP_001830335.1| thymidylate kinase [Xylella fastidiosa M23]
 gi|254808315|sp|B2I7G4|KTHY_XYLF2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|182632285|gb|ACB93061.1| dTMP kinase [Xylella fastidiosa M23]
 gi|307578444|gb|ADN62413.1| thymidylate kinase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 217

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F 
Sbjct: 9   GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  V    R  HVE++I P +  G +++ DR+  S  AYQG    +  L +D+L E 
Sbjct: 66  PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL  A  
Sbjct: 122 NAFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALE 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209


>gi|327310490|ref|YP_004337387.1| dTMP kinase [Thermoproteus uzoniensis 768-20]
 gi|326946969|gb|AEA12075.1| dTMP kinase [Thermoproteus uzoniensis 768-20]
          Length = 194

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 22/206 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EGI+G+GK+T I  L++ L      ++ T+EP   P     +   L  G  +  
Sbjct: 2   GLFVAIEGIDGSGKSTVIEELRKILP-----IYATKEPSDGPIGRLIKSWALRGGTTD-- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +A++FAA RLDH +  I PAL EG++++ +R+++SS AYQG    +  + +  ++ I
Sbjct: 55  PYVDALLFAADRLDHYQREIAPALGEGRVVVTERYVESSIAYQG----AAGVDIKFIELI 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +   PD T++LD+  +  + RV  R     S  ++ +ER + +  +  R I+L   R 
Sbjct: 111 NARVPAPDITVLLDIEPEKAVARVSAR-----SGYVEKYERLEFL--KAVRSIYL---RR 160

Query: 184 QPDRCHIV-DSAHSFQSVATNILNIV 208
             +R ++V ++    +++A  I  ++
Sbjct: 161 AAERGYVVLNAEEPPEAIARRIAEMI 186


>gi|6066868|emb|CAB58191.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066872|emb|CAB58193.1| thymidylate kinase [Yersinia enterocolitica]
          Length = 165

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 82/150 (54%), Gaps = 9/150 (6%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 16  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  IGL R + R 
Sbjct: 75  WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR- 133

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  LD  E++ +   E+ R+ +L +A
Sbjct: 134 -----GELDRIEQESLAFFERTRERYLKLA 158


>gi|297171025|gb|ADI22039.1| thymidylate kinase [uncultured myxobacterium HF0200_05J13]
          Length = 199

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EGI+G+G TT ++ +   L ++   V  T EP   P     R +L   G +
Sbjct: 1   MTKSQFIALEGIDGSGTTTQLTRIAEALTKRGRVVTQTMEPSRGPIGTRIRDILR--GEE 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   ++ A++FAA RLDH++  I PAL  G+++L DR+L SS AYQ     S H+ L  +
Sbjct: 59  KTPPDSLALLFAADRLDHLQREIAPALQRGEVVLSDRYLISSLAYQ-----SLHVELPFI 113

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-LD 179
           + I+ +   PD +I+L +  +   KR   R    E+   D     D+ + EK  Q +   
Sbjct: 114 EMINARARKPDVSILLKICPEEAAKRRATRGG--EAEIFD-----DLDLQEKISQAYDKA 166

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            AR+      IVD++ S   V   IL+ +  L
Sbjct: 167 FARSDLGPTAIVDASASMSDVTDAILSAIDSL 198


>gi|88607927|ref|YP_504721.1| thymidylate kinase [Anaplasma phagocytophilum HZ]
 gi|123495836|sp|Q2GLN0|KTHY_ANAPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|88598990|gb|ABD44460.1| thymidylate kinase [Anaplasma phagocytophilum HZ]
          Length = 219

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 19/189 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G GKTT   LL +++       +V +TREPGGT   E  R V LS    + 
Sbjct: 1   MFITFEGIDGCGKTTQSILLAKYMSDLYGEDNVVLTREPGGTSFNELLRSVFLSVSDYKV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E  +F A R +    V+  AL   KI++ DR +DS+ AYQG       + LD + +
Sbjct: 61  DKLTELFLFLAMRRESFVKVVESALRANKIVISDRCVDSTVAYQG---YGCGIDLDLIYK 117

Query: 123 IS--VQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++  V  ++PD T I+D+ ++  L R  +N Y   ES  +D++         K R+ F  
Sbjct: 118 LNSLVMGIVPDMTFIIDIDIEKALSRATRNGY---ESNSMDFY--------HKVRKGFQR 166

Query: 180 IARNQPDRC 188
           IA  +  RC
Sbjct: 167 IAEEEKHRC 175


>gi|47458911|ref|YP_015773.1| thymidylate kinase [Mycoplasma mobile 163K]
 gi|59798285|sp|Q6KIL4|KTHY_MYCMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|47458239|gb|AAT27562.1| thymidylate kinase [Mycoplasma mobile 163K]
          Length = 209

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 19/219 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTP--AAEAARHVLLSCGVD 60
           +FISFEGI+GAGK+T I  LKR L +   D     TREPGG     AE  R +LL    +
Sbjct: 1   MFISFEGIDGAGKSTIIKKLKRKLPKLYPDKKFVFTREPGGKKLKEAEKIRKILLDKKTN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E +++AA+R  H++++I PAL +G I++ DR++DSSY YQG         +  +
Sbjct: 61  -IDPMTETLLYAASRRVHLDSLIWPALKKGHIVISDRYVDSSYVYQGIARGLGVKVVKEI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178
            +I+    MPD T  L +  +  + R   R      E +  D+F R     +E   +I  
Sbjct: 120 NDIATSNFMPDYTFFLSISEEESIIRRHKRGKPDRLEMSSKDFFSRA----YEGYFKII- 174

Query: 179 DIARNQP---DRCHIVDSAHSFQSVATNILNIVWELVQK 214
               N P   DR  +V++  +  ++  NILN   ++++K
Sbjct: 175 ----NSPTMADRFILVNAEENVGTILKNILNEFDKILKK 209


>gi|313616705|gb|EFR89481.1| thymidylate kinase [Listeria innocua FSL S4-378]
          Length = 158

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%)

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLD 118
           +E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L 
Sbjct: 9   EEMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL- 67

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +   ++++ +PD T  LD+P ++GL R+      RE   LD   ++D+  HEK +  + 
Sbjct: 68  QVNLYAIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQNGYE 123

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNIL 205
            I +  PDR   VD+  + + + T IL
Sbjct: 124 KIIQMFPDRFMRVDATKTPEEITTIIL 150


>gi|78778518|ref|YP_396630.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
 gi|123554778|sp|Q31D51|KTHY_PROM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78712017|gb|ABB49194.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
          Length = 212

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 15/207 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLL-SC 57
           G FI  EGI+G GKTT I+ L ++L +     K   +  TREPGG+   +  R ++L + 
Sbjct: 3   GKFIVIEGIDGCGKTTQINELSKWLPKSGLIKKGSKLITTREPGGSLLGKKLRGLILDNN 62

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             ++  + AE ++++A R +H+  +I PAL     ++ DRF DS+ AYQG         +
Sbjct: 63  KTNKPSSLAELLLYSADRAEHISKIISPALNNNDWVISDRFSDSTLAYQGYGRKINLEII 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             ++ I  Q   PD T  L++  +  + R       R++   D  E + +   EK  + F
Sbjct: 123 KKVESIVCQGEYPDLTFFLEISPEESIMR-------RKNEIPDRIESEGIRFLEKVNEGF 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             IAR +  +  ++ ++ + ++++  I
Sbjct: 176 KLIAREK--KWKVISASQNIKTISNQI 200


>gi|123967684|ref|YP_001008542.1| thymidylate kinase [Prochlorococcus marinus str. AS9601]
 gi|166223102|sp|A2BNS4|KTHY_PROMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123197794|gb|ABM69435.1| Thymidylate kinase [Prochlorococcus marinus str. AS9601]
          Length = 212

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI  EGI+G GKTT I  L ++L      +K   +  TREPGG+   +  R ++L   
Sbjct: 3   GKFIVIEGIDGCGKTTQIDELSKWLPNSGLIKKGSKLITTREPGGSLLGKKLRGLILDNN 62

Query: 59  VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            +   +  AE ++++A R +HV  +I PAL     ++ DRF DS+ AYQG   +     +
Sbjct: 63  KNNKPSSLAELLLYSADRAEHVSKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEII 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +++ I  Q   PD T  L++  +  + R       R++   D  E + +   EK  + F
Sbjct: 123 KNIESIVCQGASPDLTFFLEISPEESIFR-------RKNEIPDRIESEGIRFLEKVNEGF 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             IA+ +     ++ ++ + Q+++  I
Sbjct: 176 KLIAKQK--NWKVISASQNIQTISNQI 200


>gi|159902685|ref|YP_001550029.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9211]
 gi|238687123|sp|A9BCY7|KTHY_PROM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|159887861|gb|ABX08075.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9211]
          Length = 215

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 6/168 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI  EGI+G GK+T IS + ++L +     KN ++++TREPGGT   ++ R +LL   
Sbjct: 3   GHFIVLEGIDGCGKSTQISHISKWLPQSGLMPKNANLYITREPGGTTLGKSLRDLLLHEH 62

Query: 59  VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                A   E +++AA R +H+ ++I+P L +G  ++ DRF  S+ AYQG         +
Sbjct: 63  ETNVPAPLTELLLYAADRAEHIHSLIQPKLDKGDWVISDRFSGSTLAYQGFGRGLDINLI 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
             L  I+ Q ++P+ TI L + V   ++R   + + R  A  + F +K
Sbjct: 123 RRLDAIARQGLVPEITIFLKISVLTSMRRRAKKSADRMEAEGEGFLKK 170


>gi|119874730|gb|ABM05842.1| Tmk [Yersinia pestis]
          Length = 150

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 5/135 (3%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           D+  TREPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G 
Sbjct: 10  DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 68

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
            ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL R + R 
Sbjct: 69  WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARARG 128

Query: 152 SLR--ESACLDYFER 164
            L   E   L +FER
Sbjct: 129 ELDRIEQESLAFFER 143


>gi|14285519|sp|Q9PFS7|KTHY_XYLFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 208

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 17/217 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F  
Sbjct: 1   MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFSP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  V    R  HVE++I P +  G +++ DR+  S  AYQG    +  L +D+L E +
Sbjct: 58  EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEAN 113

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL  A   
Sbjct: 114 AFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALEL 164

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 165 PSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 200


>gi|255994228|ref|ZP_05427363.1| dTMP kinase [Eubacterium saphenum ATCC 49989]
 gi|255993896|gb|EEU03985.1| dTMP kinase [Eubacterium saphenum ATCC 49989]
          Length = 138

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 13/140 (9%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MNS   G FI+FEG++GAGK T I  +  +L        + REPGGT  +E  R +LL  
Sbjct: 1   MNSDGFGKFITFEGLDGAGKGTQIDKVMEYLSDIGRAAILVREPGGTQLSEQIREMLLQ- 59

Query: 58  GVDEFGAE--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             +EF     +E ++F +AR + +  VIRPAL  GK ++CDR++DS+ AYQG     + L
Sbjct: 60  --NEFAISPMSELLLFLSARAELISKVIRPALESGKDVVCDRYMDSTIAYQG---YGRGL 114

Query: 116 FLD--SLQEISVQEVMPDCT 133
             +  SL  I+   ++PD T
Sbjct: 115 LSEAISLNNIATGFLVPDIT 134


>gi|294102043|ref|YP_003553901.1| thymidylate kinase [Aminobacterium colombiense DSM 12261]
 gi|293617023|gb|ADE57177.1| thymidylate kinase [Aminobacterium colombiense DSM 12261]
          Length = 203

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 11/206 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +FI+ EGI+G GK+T  + LK  LQ+K  + V  TREPGG    +  R +LL    D   
Sbjct: 1   MFITLEGIDGCGKSTQAAFLKEQLQQKKKEPVLWTREPGGWVHGDFVRTLLLE--KDLRH 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122
             +E  +F   R +HV  VI PAL  G+I+LC+R+ DS+ AYQ   R   +    D    
Sbjct: 59  ELSELFLFVIDRCEHVSQVISPALSCGQIVLCERYTDSTRAYQIWGRGLPEEKVEDLFAW 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            S  E  PD T+ +D P+ + + R++           D  E +      +  + + ++++
Sbjct: 119 CSFPE--PDLTLWIDTPLPVAINRIKT-----TRGHFDRIESETDGFLNRVCEGYKELSK 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R   +D +   + V+  I  +V
Sbjct: 172 RFPHRIVRIDGSQPTEEVSAQIWKVV 197


>gi|73668631|ref|YP_304646.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
 gi|121722245|sp|Q46DH6|KTHY_METBF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|72395793|gb|AAZ70066.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
          Length = 205

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 19/216 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I+ EGI+G+GK+T    L++  + K +    TREP  GT   +A    + S   D+F
Sbjct: 3   GKLITLEGIDGSGKSTVAEKLQKNPEIKAFKPVFTREPTRGTLTGDAVEKAIQS-DTDQF 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLD 118
              AE  +F A   +H+  +I+PAL  GKI++ DR+ DS YAYQG     R  +   ++ 
Sbjct: 62  ---AELFLFTADHAEHLAKLIKPALENGKIVISDRYSDSRYAYQGITLKTRLENPLEWVK 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L       ++PD T + D+  +I ++R   R    +   L++         +  R IFL
Sbjct: 119 DLHR--SWTIVPDLTFLFDIRPEISIERCGKRGEQSKFEKLEFL--------QGVRAIFL 168

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A + P+R  ++D++ S + +   ++  + E + +
Sbjct: 169 KLAADDPERFVVIDASRSPEYIEKEVVKKILEFLSR 204


>gi|317179651|dbj|BAJ57439.1| thymidylate kinase [Helicobacter pylori F30]
          Length = 191

 Score = 88.2 bits (217), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+ENVI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIENVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132


>gi|91773625|ref|YP_566317.1| thymidylate kinase [Methanococcoides burtonii DSM 6242]
 gi|121691672|sp|Q12VF9|KTHY_METBU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|91712640|gb|ABE52567.1| Thymidylate kinase [Methanococcoides burtonii DSM 6242]
          Length = 201

 Score = 88.2 bits (217), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 24/216 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I+ EGI+G+GK+T    + RFL       +   T+EP  +   +A    + S   DE
Sbjct: 3   GKLITLEGIDGSGKST----ITRFLNSHPAFANAVFTKEPTTSWIGDAVYKAIQS-DTDE 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFL 117
               AE ++F A   DH+  +IRPA+ EGKI++ DR+ DS YAYQG    ER      ++
Sbjct: 58  L---AELMLFTADHADHISTLIRPAIEEGKIVISDRYSDSRYAYQGVTLKERMEEPMEWI 114

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +       ++PD T++ D+   + ++R   R    +      FE+ D++  +  R+ +
Sbjct: 115 QMIHR--GWTIIPDLTLLFDIDPAVAVQRCGKRGEQTK------FEKTDLL--KGVRENY 164

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           L +A  +P+R  ++D+    + +  ++L  +  +++
Sbjct: 165 LKLAEKEPERFVVIDTDRDLKEIEKDVLQAITSIIE 200


>gi|28199448|ref|NP_779762.1| thymidylate kinase [Xylella fastidiosa Temecula1]
 gi|32129653|sp|Q87B89|KTHY_XYLFT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28057563|gb|AAO29411.1| thymidylate kinase [Xylella fastidiosa Temecula1]
          Length = 208

 Score = 88.2 bits (217), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 17/217 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F  
Sbjct: 1   MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFSP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  V    R  HVE++I P +  G +++ DR+  S  AYQG    +  L +D+L E +
Sbjct: 58  EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEAN 113

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL  A   
Sbjct: 114 AFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALEL 164

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 165 PSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 200


>gi|188528244|ref|YP_001910931.1| thymidylate kinase [Helicobacter pylori Shi470]
 gi|238691955|sp|B2UVL9|KTHY_HELPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|188144484|gb|ACD48901.1| thymidylate kinase [Helicobacter pylori Shi470]
          Length = 191

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 17/150 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +  VT+EPGGT   E  RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALVTKEPGGTRMGEHLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           + Q V+PD  I+L +  + GLK+  +  SL
Sbjct: 106 ATQSVLPDKIILLLIDKE-GLKQRLSHKSL 134


>gi|123965393|ref|YP_001010474.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
 gi|166223101|sp|A2BUA6|KTHY_PROM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123199759|gb|ABM71367.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
          Length = 210

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI  EGI+G GKTT I  + R+L       KN  +  TREPGG+   +  R+++L   
Sbjct: 3   GKFIVIEGIDGCGKTTQIDEISRWLPTSGLMGKNSKLIKTREPGGSLLGKKLRNLILDNN 62

Query: 59  VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            +   +  AE ++++A R +HV  +I PAL +   ++ DRF DS+ AYQG         +
Sbjct: 63  KNNKPSSLAELLLYSADRAEHVSKIISPALKKEDWVISDRFSDSTLAYQGYGRHINLEII 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +++ I  Q   PD TI L++  +  + R       R++   D  E + +   +K  + F
Sbjct: 123 KNIESIVCQGEYPDLTIFLEISAEESILR-------RKNFVPDRMESEGINFLQKVNEGF 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             IA+ +  +  ++ +  +  +++  I
Sbjct: 176 KLIAKEK--KWKVISATQNITAISNEI 200


>gi|270669144|ref|ZP_06222575.1| dTMP kinase [Haemophilus influenzae HK1212]
 gi|270316610|gb|EFA28429.1| dTMP kinase [Haemophilus influenzae HK1212]
          Length = 111

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 1/105 (0%)

Query: 4   GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK++ H S+++   +    DV  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
             +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG
Sbjct: 63  TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQG 107


>gi|51246661|ref|YP_066545.1| thymidylate kinase [Desulfotalea psychrophila LSv54]
 gi|59798232|sp|Q6AJE2|KTHY_DESPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|50877698|emb|CAG37538.1| related to thymidylate kinase [Desulfotalea psychrophila LSv54]
          Length = 202

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 19/214 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G  I FEG +GAGK+T I +L  +L+ K  DV  + EP   P  +  R   L    ++
Sbjct: 4   NPGKLIIFEGTDGAGKSTQIKMLANYLRSKGLDVIASFEPTNGPYGQKIRQ--LYTDRNK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
                E  +F A R +HV  +I PA+  GKI+LCDR+  S+ AYQG    D  + L  +S
Sbjct: 62  VTRNEELELFLADRREHVNKLINPAISAGKIVLCDRYYLSTAAYQGALGFDVEEILQRNS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     PD  ++L +PV+ G +R+    S R     D FE+ +++  EK   IF  
Sbjct: 122 FAP------TPDLALLLQIPVEDGRRRIT---SSRGEETND-FEKAEML--EKVSTIFNS 169

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           ++   P   HI ++  S  +V  +I+  V +L++
Sbjct: 170 LSF--PYIRHI-NACQSIDNVQRDIIMQVKQLLK 200


>gi|226330525|ref|ZP_03806043.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198]
 gi|225201320|gb|EEG83674.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198]
          Length = 207

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 20/206 (9%)

Query: 17  KTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVD--EFGAEAEAIVFAA 73
           KT+ I  +   L+ K   ++  TREPGGTP AE  R  L+  G++  +   +AE ++  A
Sbjct: 9   KTSAIQTVIDTLKDKGITNLAFTREPGGTPLAEKLRE-LIKQGIEGEKVTDKAELLMLYA 67

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQEVMPDC 132
           AR+  +ENVI+PAL EGK ++ DR   SS AYQ G R   + L L SL+   +    PD 
Sbjct: 68  ARVQLIENVIKPALAEGKWVIGDRHDLSSQAYQGGGRGLDKDLML-SLRNTVLGNFRPDL 126

Query: 133 TIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           T+ LDL   IGL R + R  L   E   +D+F R         R+ +  +A++  D    
Sbjct: 127 TLYLDLDPAIGLTRARARGELDRIEKESMDFFYRT--------RERYQALAKDD-DTIIT 177

Query: 191 VDSAHSFQSVATNILNIV--WELVQK 214
           +D++ +   V  +I  I+  W LVQ+
Sbjct: 178 IDASQAIDKVQADIRQILTAW-LVQQ 202


>gi|261840150|gb|ACX99915.1| thymidylate kinase [Helicobacter pylori 52]
          Length = 191

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 23/164 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALEEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           + Q V+P+  I+L +  + GLK+   R SL+    LD  E + +
Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK---SLDKIENQGI 142


>gi|321309545|ref|YP_004191874.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1]
 gi|319801389|emb|CBY92035.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1]
          Length = 220

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 8/216 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLK--RFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGV 59
           GLF+ FEGI+G+GKTT I  LK  + +     ++  T EPGG         R ++L  G 
Sbjct: 9   GLFVVFEGIDGSGKTTLIKALKGSKKISEAYREILFTYEPGGKDNTFGNKIRDLILREG- 67

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    + +A++F A+R +H+E +I+PAL    +++CDR+  S+  YQG+ D  +  ++  
Sbjct: 68  NSLSEKTQALLFLASRSEHLEKIIQPALDREALIICDRYYLSTLVYQGKGDLDRINWIRK 127

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            Q+  +    PD T  L+L  +  L R +N+   +E+  +D    +D +   K  +I + 
Sbjct: 128 NQDF-ITFRKPDITFFLNLSWEEYLSRYKNKVESQENNWMDKLIYEDYLRMCKSYEIAM- 185

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +   R  ++D   S  ++   I +++ E+   R
Sbjct: 186 -KEDISGRLILLDGGDSTNNLVKRIEDVLVEVANGR 220


>gi|282163168|ref|YP_003355553.1| probable thymidylate kinase [Methanocella paludicola SANAE]
 gi|282155482|dbj|BAI60570.1| probable thymidylate kinase [Methanocella paludicola SANAE]
          Length = 201

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 19/208 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I+ EGI+G GKTT + LLK +L+R   +    +EP  G    E AR          
Sbjct: 4   KGRLITIEGIDGTGKTTQVQLLKEWLERHGVEAVALKEPTQGKYGQEIARR----AHAGS 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSL 120
           FG   E  +F   R + VE  IRPAL  GK ++ DR+  S+ AYQG R    + + L++ 
Sbjct: 60  FGPRDELRLFMEDRREDVEKNIRPALESGKSVIMDRYYLSNMAYQGARGLDPERIRLEN- 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                   +PD  IILDL  +  + RV  R +      + +FE +  +  EK R+IFL I
Sbjct: 119 ---EAFSPVPDLIIILDLAPEKSMARVNTRKN-----VVGHFENEAYL--EKVRKIFLAI 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + QP+   ++++      V   I++ V
Sbjct: 169 GK-QPNAV-VINTEAPVADVHERIVDAV 194


>gi|320107127|ref|YP_004182717.1| thymidylate kinase [Terriglobus saanensis SP1PR4]
 gi|319925648|gb|ADV82723.1| thymidylate kinase [Terriglobus saanensis SP1PR4]
          Length = 217

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 4/152 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCG 58
           +G FISFEG++G+GKTT +  L+ FL  +  +V   R+PGGT   +  R V+L       
Sbjct: 2   AGFFISFEGLDGSGKTTQLRRLETFLIGRGREVVSLRQPGGTALGDRIRAVVLDSKTEAA 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           V +     E  +  A R   +  VI PAL  GKI+LCDR+ DS+ AYQG         + 
Sbjct: 62  VGKIAPMTEMALMFADRAQAIAEVILPALEAGKIVLCDRWTDSTEAYQGGGRGLGAEKVL 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            +      ++ P  TI+L   +   LKR + R
Sbjct: 122 EMHHAVCGDLWPALTILLLPDLQASLKRARRR 153


>gi|297569137|ref|YP_003690481.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925052|gb|ADH85862.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
          Length = 222

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 15/169 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ I+ EGI+G GK+T   LL + L++   +V VTREP   P     R + L+      
Sbjct: 13  AGVLIALEGIDGTGKSTQQQLLAQRLRQLGLEVVVTREPTDGPYGRRLRELFLNRA--SL 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E  +F A R +HV  +I PAL  G++++ DR+  S+ AYQG   +S H   D    
Sbjct: 71  SPEEELQLFLADRREHVAKLIEPALKAGRVVITDRYYYSTAAYQG---ASGH---DPAAI 124

Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           +++ E     PD  ++L+ P  +G++RVQ          L+ FE++D +
Sbjct: 125 LAINESFAPRPDLVLLLEAPPAVGVRRVQE----GRGESLNDFEQEDYL 169


>gi|126695487|ref|YP_001090373.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9301]
 gi|166223098|sp|A3PAJ7|KTHY_PROM0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|126542530|gb|ABO16772.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9301]
          Length = 212

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI  EGI+G GKTT I  L ++L      +K   +  TREPGG+   +  R ++L   
Sbjct: 3   GKFIVIEGIDGCGKTTQIDELSKWLPISGLLKKESKLITTREPGGSLLGKKLRRLILDNN 62

Query: 59  VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            +   +  AE ++++A R +HV  +I PAL     ++ DRF DS+ AYQG   +     +
Sbjct: 63  ENNKPSSLAELLLYSADRAEHVSKIILPALNNNDWVISDRFSDSTLAYQGYGRNINLEII 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
            +++ I  Q   PD T  L++  +  + R +N    R ES  + + ER
Sbjct: 123 KNIESIVCQGASPDLTFFLEISPEESIFRRKNEIPDRIESEGIRFLER 170


>gi|208435342|ref|YP_002267008.1| thymidylate kinase [Helicobacter pylori G27]
 gi|238057700|sp|B5Z993|KTHY_HELPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|208433271|gb|ACI28142.1| thymidylate kinase [Helicobacter pylori G27]
          Length = 191

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 23/164 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKTRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +HVE+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           + Q ++P+  I+L +  + GLK+   R SL+    LD  E + +
Sbjct: 106 ATQSILPEKIILLVIDKE-GLKQ---RLSLK---SLDKIENQGI 142


>gi|297380671|gb|ADI35558.1| thymidylate kinase [Helicobacter pylori v225d]
          Length = 191

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 30/208 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +  VT+EPGGT   E  RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALVTKEPGGTRMGEHLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q V+P+  I+L +  + GLK+   R SL+    LD  E +         +  L I + 
Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK---SLDKIENQGT-------EKLLTIQQK 151

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
                H +      + +  +    VW+L
Sbjct: 152 LKTHAHALKEKFGCEVLELDAQKSVWDL 179


>gi|20093219|ref|NP_619294.1| thymidylate kinase [Methanosarcina acetivorans C2A]
 gi|23821774|sp|Q8THS9|KTHY_METAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|19918569|gb|AAM07774.1| thymidylate kinase Tmk [Methanosarcina acetivorans C2A]
          Length = 206

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 19/216 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I+ EGI+G+GK+T    L+   + + ++   TREP  GT    A  + + S   D+ 
Sbjct: 3   GKLITLEGIDGSGKSTVAKKLQENSELRVFEPVFTREPTRGTLTGNAVENAIQS-DTDQL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +F A   +H+  +++PAL +GK ++ DR+ DS YAYQG   + ++   + L+ 
Sbjct: 62  ---AELFLFTADHAEHLAKLVKPALEDGKTVISDRYSDSRYAYQG--ITLKNRLDNPLEW 116

Query: 123 I----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +        V+PD T + D+  +I +KR   R    +   +++            R++FL
Sbjct: 117 VRDLHRGWTVIPDLTFLFDIEPEIAVKRCGKRGEQTKFEKIEFL--------RGVRELFL 168

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A  +P+R  IVD++ S + V   ++  + + VQ+
Sbjct: 169 GLAAEEPERFVIVDASGSPEDVEKAVVQKILDFVQR 204


>gi|187736367|ref|YP_001878479.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835]
 gi|254808272|sp|B2UN87|KTHY_AKKM8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187426419|gb|ACD05698.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835]
          Length = 206

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 6/147 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEGI+G GK+THI  L+++L+ K  +V  + EP         R +  S       
Sbjct: 9   GRLIVFEGIDGTGKSTHIGHLRKYLEEKELEVVQSFEP---TRGRWGRMLRDSAVTGRLS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  +F   R +HV+ +I PAL  G  +L DR+  S  AYQG R     +   + +E 
Sbjct: 66  VEEEVALFLKDRREHVKMLIAPALARGAWVLLDRYYLSMMAYQGARGIDPEVIRAANEEF 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +    +PD  + LD+PV + L+R+ NR
Sbjct: 126 A---PVPDAVVWLDIPVSVALERIGNR 149


>gi|222457907|gb|ACM61840.1| thymidylate kinase [Yersinia pseudotuberculosis]
          Length = 178

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 9/147 (6%)

Query: 37  VTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
           + REPGGTP AE  R  L+  G+D      +AE ++  AAR+  VENVI+PAL  G  ++
Sbjct: 27  LPREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVV 85

Query: 95  CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
            DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL R + R    
Sbjct: 86  GDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARARGE-- 143

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIA 181
               LD  E++ +   E+ R  +L++A
Sbjct: 144 ----LDRIEQESLAFFERTRARYLELA 166


>gi|308062738|gb|ADO04626.1| thymidylate kinase [Helicobacter pylori Cuz20]
          Length = 191

 Score = 86.3 bits (212), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 23/162 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +  VT+EPGGT   E  RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALVTKEPGGTRMGEHLRHIALNESISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           + Q V+P+  I+L +  + GLK+   R SL+    LD  E +
Sbjct: 106 ATQSVLPEKIILLLIDKE-GLKQ---RLSLK---SLDKIENQ 140


>gi|327398213|ref|YP_004339082.1| Thymidylate kinase [Hippea maritima DSM 10411]
 gi|327180842|gb|AEA33023.1| Thymidylate kinase [Hippea maritima DSM 10411]
          Length = 201

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 17/209 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           NS  +I+FEGI+ +GKTT   L   FL+++ ++V  T+EPGGT      R VLL+    +
Sbjct: 8   NSCRYIAFEGIDASGKTTQAKLFVDFLKKEGFNVFFTKEPGGT--IPFFREVLLN---KQ 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A+  +F A R   +   I+  L  G +++ DR   S+ AYQG  D     FL    
Sbjct: 63  LVKQAQLFLFLADRAQTIL-TIKKKLDAGFVVVSDRSFYSTLAYQGFGDDMDIGFLKQAN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           EI+   + PD    +D+  +  + R+  +         D  E K V   E+ RQ ++ ++
Sbjct: 122 EIATGGLKPDLVFCIDITTNEMMNRLNKK---------DAIESKPVGFFERVRQGYIKLS 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           ++  D  ++V+   S   V + ++ I W+
Sbjct: 173 KDY-DNFYLVNGLRSIDDVFSEVVEI-WK 199


>gi|157412486|ref|YP_001483352.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
 gi|166987706|sp|A8G2D5|KTHY_PROM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157387061|gb|ABV49766.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
          Length = 212

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI  EGI+G GKTT I  L ++L      +K   +  TREPGG+   +  R ++L   
Sbjct: 3   GKFIVIEGIDGCGKTTQIDELSKWLPSSGLIKKGSKLITTREPGGSHLGKRLRGLILDNN 62

Query: 59  VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            +   +  AE ++++A R +HV  +I PAL     ++ DRF DS+ AYQG   +     +
Sbjct: 63  QNNKPSPLAELLLYSADRAEHVYKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEII 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
            +++ I  Q   PD T  L++  +  + R +N+   R ES  +++ E+
Sbjct: 123 KNIESIVCQGESPDLTFFLEISPEESIFRRKNQIPDRIESEGIEFLEK 170


>gi|94266074|ref|ZP_01289792.1| Thymidylate kinase [delta proteobacterium MLMS-1]
 gi|94267013|ref|ZP_01290658.1| Thymidylate kinase [delta proteobacterium MLMS-1]
 gi|93452287|gb|EAT02928.1| Thymidylate kinase [delta proteobacterium MLMS-1]
 gi|93453357|gb|EAT03788.1| Thymidylate kinase [delta proteobacterium MLMS-1]
          Length = 218

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 14/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ I+ EGI+G GK+T + LL R L+    +V  T EP   P     R +  +    + 
Sbjct: 13  AGILIALEGIDGTGKSTQLKLLARRLRELGLEVVTTFEPTDGPHGRYLRQMFKNRA--QL 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E  +F A R DHVE VI PAL  GK++L DR+  S+ AYQG         +   ++
Sbjct: 71  PPKEELRLFIADRHDHVEQVIAPALAAGKVVLTDRYYFSTAAYQGAAGHDPAAIIAENEQ 130

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +   PD  ++L+ P  +G+ RV+    LR    L+ FE++D +   +   IF  +A 
Sbjct: 131 FAPR---PDLVLLLEAPPAVGIARVRE---LR-GESLNDFEQEDYL--RRVTAIFASLAD 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +   R   +D+      V   +   V +L++++
Sbjct: 182 S---RIRRIDATGRLDQVQQRLWPPVAQLLRQQ 211


>gi|317011608|gb|ADU85355.1| thymidylate kinase [Helicobacter pylori SouthAfrica7]
          Length = 191

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 21/161 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T I LLK   Q   +    T+EPGGT   E  R + L+  + E   
Sbjct: 1   MYVVLEGVDGAGKSTQIELLKGAFQNALF----TKEPGGTKTGETLRRIALNENMSEL-- 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E K+++ DR L S  AY      SQ   L+ L  ++
Sbjct: 55  -ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            Q ++P+  IIL L  + GLK    R SL+    LD  E++
Sbjct: 107 TQSILPE-KIILLLIDEEGLKE---RLSLK---SLDKIEKQ 140


>gi|217033894|ref|ZP_03439318.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10]
 gi|216943657|gb|EEC23102.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10]
          Length = 191

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 23/164 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           + Q V+P+  I+L +  + GLK+   R SL+    LD  E + +
Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLKN---LDKIENQGI 142


>gi|302553088|ref|ZP_07305430.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736]
 gi|302470706|gb|EFL33799.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736]
          Length = 547

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 8/168 (4%)

Query: 37  VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           +TREPG TP  +  R +LL          AEA+++AA R +HV+ V+RPAL  G +++ D
Sbjct: 2   LTREPGATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVISD 61

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           R++DSS AYQG         +  +   +   ++P  T++L    D+  +  + R+    +
Sbjct: 62  RYIDSSVAYQGAGRDLSPTEIARINRWATNGLVPHLTVLL----DVAPETARERF----T 113

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
              D  E +    H + R  FL +A     R  +VD+    ++V T I
Sbjct: 114 EAPDRLESEPAEFHARVRAGFLTLAAADAGRYLVVDAGQEAEAVTTVI 161


>gi|21227213|ref|NP_633135.1| thymidylate kinase [Methanosarcina mazei Go1]
 gi|23821771|sp|Q8PXV5|KTHY_METMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|20905554|gb|AAM30807.1| Thymidylate kinase [Methanosarcina mazei Go1]
          Length = 206

 Score = 85.5 bits (210), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 19/216 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I+ EGI+G+GK+T    ++   + + +D   TREP  GT    A  + + S    E 
Sbjct: 3   GKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAIQS----ET 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +F A   +H+  +++PAL  GK ++ DR+ DS YAYQG    S+  F + L+ 
Sbjct: 59  DQLAELFLFTADHAEHLAKLVKPALANGKNVISDRYSDSRYAYQGVTLKSR--FENPLEW 116

Query: 123 I----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +    S   V+PD T + D+  +I ++R   R    +      FE+ + +  +  R+ FL
Sbjct: 117 VRSLHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQTK------FEKIEFL--QNVRENFL 168

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A   P R  ++D++   + V   ++  V E +Q+
Sbjct: 169 ILAAEDPGRFVVIDASRPQEEVEKKVIKKVLEFIQR 204


>gi|315585861|gb|ADU40242.1| thymidylate kinase [Helicobacter pylori 35A]
          Length = 191

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKNRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQSVLPEKIILLMIDKE-GLKQ---RLSLK 132


>gi|308183576|ref|YP_003927703.1| thymidylate kinase [Helicobacter pylori PeCan4]
 gi|308065761|gb|ADO07653.1| thymidylate kinase [Helicobacter pylori PeCan4]
          Length = 191

 Score = 85.1 bits (209), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 23/162 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           ++++ EG++G GK+T + LLK RF      +  VT+EPGGT   E+ R + L+  + E  
Sbjct: 1   MYVALEGVDGVGKSTQVGLLKDRF-----KNALVTKEPGGTKIGESLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E ++++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKRLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           + Q V+PD  I+L +  + GLK+   R SL+    LD  E +
Sbjct: 106 ATQSVLPDKIILLLIDKE-GLKQ---RLSLK---SLDKIENQ 140


>gi|291288268|ref|YP_003505084.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885428|gb|ADD69128.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809]
          Length = 211

 Score = 85.1 bits (209), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 2/146 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ +GI+G GK+T  + +   L +   +V +TREPGGT A    R +L+S   D    
Sbjct: 6   LFIAVDGIDGCGKSTLSAGMAEKLDKLGRNVKLTREPGGTDAGLLIRQLLVSKKYD-LEP 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E +++ A RL+H   ++ P L +G  ++ DRF+ S+YAYQ          LD L   S
Sbjct: 65  QSELMLYCADRLEHQTKLVIPVLEKGFDVISDRFVSSTYAYQIFGRGLDKDLLDYLTGYS 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150
           ++  MPD T I+++  +  L+R  +R
Sbjct: 125 IRR-MPDITFIIEIDPETALERAMSR 149


>gi|317010152|gb|ADU80732.1| thymidylate kinase [Helicobacter pylori India7]
          Length = 191

 Score = 84.7 bits (208), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 16/133 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKIGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIIL 136
           + Q ++P+  I+L
Sbjct: 106 ATQSILPEKIILL 118


>gi|197294352|ref|YP_001798893.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|197294409|ref|YP_001798950.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853679|emb|CAM11562.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853736|emb|CAM11659.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score = 84.7 bits (208), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 23/222 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     +   +
Sbjct: 5   LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + ++  A  L   + +I PAL+ G ++L DR+ DS++AYQ + +     ++D   +I+ 
Sbjct: 63  TKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGN-----YIDYDDKITS 117

Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQI 176
           +      + P  T  LD+   IGLKR Q    ++  L E   L+YF  K+V  H   +Q 
Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQK 175

Query: 177 FLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
           + + +  +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 176 YCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|197294763|ref|YP_001799304.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171854090|emb|CAM12069.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 23/222 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     +   +
Sbjct: 5   LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + ++  A  L   + +I PAL+ G ++L DR+ DS++AYQ + +     ++D   +I+ 
Sbjct: 63  TKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGN-----YIDYDDKITS 117

Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQI 176
           +      + P  T  LD+   IGLKR Q    ++  L E   L+YF  K+V  H   +Q 
Sbjct: 118 KIINHFLIKPKLTFYLDIEPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQK 175

Query: 177 FLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
           + + +  +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 176 YCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|11497681|ref|NP_068902.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304]
 gi|6016458|sp|O30175|KTHY_ARCFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|2650584|gb|AAB91163.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304]
          Length = 196

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 21/205 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGKTT  + +   L+ K Y V V +EPG +   +      +    +    
Sbjct: 1   MLIAVEGIDGAGKTTIAAYIAELLKEKGYKVKVLKEPGDSKFGKK-----IKSSEERLSP 55

Query: 65  EAEAIVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           E E  +F   R +D  EN++ PAL  G  ++ DR+  S+ AYQ  R     L  +  ++I
Sbjct: 56  EEELELFLKDREIDARENIL-PALQSGYAVVMDRYYFSNIAYQSARGIDARLIREMNEKI 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +   PD TI+LD+  +I L+RV+ R  L     LDY          K R+ FL+   N
Sbjct: 115 APK---PDLTILLDVEPEIALERVRKRGKLSPFEKLDYL--------RKVRKCFLE---N 160

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             +   +VD++   + V   +  ++
Sbjct: 161 ADETTVVVDASKPLEEVKEEVRKVI 185


>gi|197294197|ref|YP_001798738.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853524|emb|CAM11374.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score = 84.7 bits (208), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 13/217 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     +   +
Sbjct: 5   LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + ++  A  +   + +I PAL+ G ++L DR+ DS++AYQ + +   +    + + I+ 
Sbjct: 63  TKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITSKIINY 122

Query: 126 QEVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + P  T  LD+   IGLKR Q    ++  L E   L+YF  K+V  H   +Q + + +
Sbjct: 123 FLIKPKLTFYLDIDPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQKYCNDS 180

Query: 182 RNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
             +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 181 NCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|294496621|ref|YP_003543114.1| thymidylate kinase [Methanohalophilus mahii DSM 5219]
 gi|292667620|gb|ADE37469.1| thymidylate kinase [Methanohalophilus mahii DSM 5219]
          Length = 199

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 22/206 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  ++ EGI+G+GKTT +  L+   Q   Y D+  TREP      +A    + S  VD  
Sbjct: 3   GKLVTLEGIDGSGKTTIMEYLE---QNPIYSDIIFTREPTKDWIGQAVIRAIHS-DVDPL 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++F A   +H+ N I PA+  G++++ DR+ DS  AYQ    + +  F D ++ 
Sbjct: 59  ---AELLLFTADHAEHIRNTIIPAVQAGRVIISDRYSDSRIAYQSS--TLKDRFDDPVEW 113

Query: 123 ISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           I        V+PD T++LD+  +I + R  +R +  +      FE+ D +   + R +FL
Sbjct: 114 IKQLHRGWSVVPDLTLLLDIDPEIAVSRCNSRDAQTK------FEKVDFL--SQVRNVFL 165

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
            +A   P R  I+D++   + V   +
Sbjct: 166 QLAEENPQRFVIIDASQGLEKVKKEV 191


>gi|317013243|gb|ADU83851.1| thymidylate kinase [Helicobacter pylori Lithuania75]
          Length = 191

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R + L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKNRF-----KNALFTKEPGGTKMGESLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132


>gi|115376927|ref|ZP_01464147.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|310820577|ref|YP_003952935.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|115366038|gb|EAU65053.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|309393649|gb|ADO71108.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 564

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 14/198 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           +FI FEGI+G+GKTT  +LL   L+R+ Y V   RE G   +P A   R       + E 
Sbjct: 1   MFIDFEGIDGSGKTTLSNLLAARLRRQGYKVAHAREGGELQSPIARRVRDFTRDSKLLEM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121
           GA  E  +  A     +E VI PAL  G++ + DR+L S  A  G     + L L+ L  
Sbjct: 61  GARTEFFLNLARDAQQLEEVISPALCRGEVCISDRYLYSQLALSG---GGRGLPLEDLAP 117

Query: 122 --EISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVM---IHEKRRQ 175
             E++ + + PD  I++D+  D  L R++ R   ++E    D   RK +    +  + R+
Sbjct: 118 ACELASKGIWPDLVILVDVEPD--LARLRKRLGKVKEGRNSDGDSRKGLAGAGLSVRVRE 175

Query: 176 IFLDIARNQPDRCHIVDS 193
            FL++AR  P R  ++++
Sbjct: 176 AFLEMARKDPARWLVIEN 193


>gi|197294219|ref|YP_001798760.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|197294324|ref|YP_001798865.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|197294822|ref|YP_001799363.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853546|emb|CAM11406.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853651|emb|CAM11530.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171854149|emb|CAM12141.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 23/222 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     +   +
Sbjct: 5   LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + ++  A  +   + +I PAL+ G ++L DR+ DS++AYQ + +     ++D   +I+ 
Sbjct: 63  TKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGN-----YIDYDDKITS 117

Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQI 176
           +      + P  T  LD+   IGLKR Q    ++  L E   L+YF  K+V  H   +Q 
Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQK 175

Query: 177 FLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
           + + +  +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 176 YCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|217031818|ref|ZP_03437321.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128]
 gi|298735556|ref|YP_003728077.1| dTMP kinase [Helicobacter pylori B8]
 gi|216946470|gb|EEC25072.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128]
 gi|298354741|emb|CBI65613.1| dTMP kinase [Helicobacter pylori B8]
          Length = 191

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           ++++ EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R + L+  + E  
Sbjct: 1   MYVALEGVDGAGKSTQVGLLKTRF-----KNALFTKEPGGTKIGESLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +HVE+VI+PAL E ++++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHVESVIKPALKEKRLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132


>gi|33860690|ref|NP_892251.1| thymidylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|46576452|sp|Q7V3E6|KTHY_PROMP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33633632|emb|CAE18589.1| Thymidylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 214

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 13/187 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G FI  EGI+G GKTT I  + ++     L R    +  TREPGG+   +  R+++L   
Sbjct: 3   GKFIVIEGIDGCGKTTQIDEISKWIPTSGLLRGKQKLVKTREPGGSLLGKKIRNLILDNH 62

Query: 59  VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            D   +  AE ++++A R +H+   I PAL     +L DRF DS+ AYQG   +     +
Sbjct: 63  KDNKPSSLAELLLYSADRAEHISKTISPALENQDWVLSDRFCDSTLAYQGYGRNINLEII 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +++ I  Q   PD TI L++  +  + R       RE    D  E + +   EK  + F
Sbjct: 123 KNIESIVCQGESPDLTIFLEISAEESVLR-------REKFIPDRMESEGIKFLEKVNEGF 175

Query: 178 LDIARNQ 184
             IA+ +
Sbjct: 176 KLIAKEK 182


>gi|317181157|dbj|BAJ58943.1| thymidylate kinase [Helicobacter pylori F32]
          Length = 191

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E  RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGENLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P   I+L +  + GLK+   R SL+
Sbjct: 106 ATQSVLPKKIILLLIDKE-GLKQ---RLSLK 132


>gi|261838748|gb|ACX98514.1| thymidylate kinase [Helicobacter pylori 51]
          Length = 191

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --TRAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132


>gi|317182679|dbj|BAJ60463.1| thymidylate kinase [Helicobacter pylori F57]
          Length = 191

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF          T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKGRF-----KSALFTKEPGGTRMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQSVLPEKIILLMIDKE-GLKQ---RLSLK 132


>gi|317178179|dbj|BAJ55968.1| thymidylate kinase [Helicobacter pylori F16]
          Length = 191

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNESISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q V+P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQGVLPEKIILLVIDKE-GLKQ---RLSLK 132


>gi|288921143|ref|ZP_06415431.1| thymidylate kinase [Frankia sp. EUN1f]
 gi|288347452|gb|EFC81741.1| thymidylate kinase [Frankia sp. EUN1f]
          Length = 859

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLFI+ EG   AG    + LL+ +L     +V V RE  GTP + + R  LL      
Sbjct: 598 HAGLFITIEGDTAAGAEGQLDLLQEWLAASGREVVVVREKTGTPISASVRE-LLDAPSTR 656

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 A++ AA R + V  +I PAL  G I+L DR+  SS A+QG         L +L 
Sbjct: 657 PHFRTVALLDAADRAEQVARIIEPALARGAIVLADRYAASSKAFQGADPRLDQDELAALA 716

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           + +   ++PD T++LDLP +    R   R
Sbjct: 717 QWATHSLLPDVTVLLDLPTERKAPRPTTR 745


>gi|109948201|ref|YP_665429.1| thymidylate kinase [Helicobacter acinonychis str. Sheeba]
 gi|123173187|sp|Q17V96|KTHY_HELAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|109715422|emb|CAK00430.1| tmk [Helicobacter acinonychis str. Sheeba]
          Length = 191

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 87/163 (53%), Gaps = 21/163 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+G GK+T I LLK   Q   +    T+EPGGT   E  RH+ L   + E   
Sbjct: 1   MYVVLEGIDGVGKSTQIELLKSAFQNALF----TKEPGGTKIGETLRHIALHENLSEL-- 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY     SS  L L     ++
Sbjct: 55  -ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----LA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
            Q ++P   I+L +  + GLK    R SL+    LD  E + V
Sbjct: 107 TQSILPAKIILLWIDKE-GLKE---RLSLK---SLDKIENQGV 142


>gi|149923263|ref|ZP_01911673.1| thymidylate kinase [Plesiocystis pacifica SIR-1]
 gi|149815860|gb|EDM75380.1| thymidylate kinase [Plesiocystis pacifica SIR-1]
          Length = 210

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 15/212 (7%)

Query: 1   MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN+ +  F+ FEGI+G+G TT +  +   L+ + + V  TR+P   P     R +L   G
Sbjct: 1   MNTPIPRFLVFEGIDGSGTTTQLRRVSEALRERGHRVVETRQPSPGPIGALTRELLAVDG 60

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                 G E  A++FAA RL+H+  V+ PAL EG ++LCDR++ SS+ YQ     S    
Sbjct: 61  GKARTVGPEGLALMFAADRLEHLARVVEPALSEGAVVLCDRYVVSSWVYQ-----SLDCD 115

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              ++ I+     PD T + DL  D  +   +      E+  +   ER DV   ++R   
Sbjct: 116 RAWVRTINTHARWPDRTYVFDL--DPEIALARVAARRAETGQV--VERFDVPDTQRRLAA 171

Query: 177 FLDIARNQPDRCHI--VDSAHSFQSVATNILN 206
                 ++ D   +  VD+A S  +V T I+ 
Sbjct: 172 GYRAVLDEADLSGLVAVDAAASIDAVTTAIVE 203


>gi|15612432|ref|NP_224085.1| thymidylate kinase [Helicobacter pylori J99]
 gi|8134530|sp|Q9ZJE5|KTHY_HELPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|4155994|gb|AAD06956.1| THYMIDYLATE KINASE [Helicobacter pylori J99]
          Length = 191

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 23/164 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R + L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           + Q V+P+  I+L     I  + ++ R SL+    LD  E + +
Sbjct: 106 ATQSVLPEKIILL----LINKENLKQRLSLK---SLDKIENQGI 142


>gi|257457560|ref|ZP_05622727.1| thymidylate kinase [Treponema vincentii ATCC 35580]
 gi|257444946|gb|EEV20022.1| thymidylate kinase [Treponema vincentii ATCC 35580]
          Length = 209

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 15/211 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKR-FLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           F+ FEG++G G T+ + LL+  F  R   D V+ T EP G    +  R  L   G   F 
Sbjct: 6   FVVFEGLDGTGTTSQLRLLREAFTTRGLQDTVYFTCEPTGDSIGKLIREAL--SGAAGFD 63

Query: 64  AEAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           A+  A +F A R +HV  ++ I   L  GK +  DR+L SS AYQG  D+ + L     Q
Sbjct: 64  AKTIAYLFGADRCEHVYGKSGILTQLQAGKAVFSDRYLFSSLAYQG-LDAGKEL----AQ 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+    +P+     DLP    + R++ R   RE    + F++K   +  + + IF   A
Sbjct: 119 TINAPFPLPEYLFFFDLPASTAMARIEKRNIPREIYEKETFQQK---VAAEYQAIFRHYA 175

Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211
              PD R   +D++ + + +  NI  IV  L
Sbjct: 176 ETAPDMRILRIDASKTIEEIHENIWRIVCNL 206


>gi|197294449|ref|YP_001798990.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853776|emb|CAM11708.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 20/195 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ISFEG++G+GKTT I+ LK++ + K Y + V +  G +   +  R++ L     +   +
Sbjct: 5   LISFEGVDGSGKTTLINELKKYFENKGYQIKVFQGLGSSIVGKEIRNLFLHQS--KISPK 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + ++  A  L   + +I PAL+ G ++L DR+  S++AYQ + +     ++D   +I+ 
Sbjct: 63  TKYLLSLANMLQTQDELIIPALLSGYLVLVDRWYGSTFAYQSKGN-----YIDYDDKITS 117

Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +      + P  T  LD+   IG++R QN+ + +    LD  ERK +   E  R+ +L  
Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK----LDLIERKPLNYFENVRKHYL-- 171

Query: 181 ARNQPDRCHIVDSAH 195
             NQ   C+  +  H
Sbjct: 172 --NQHKYCNDANYNH 184


>gi|308185243|ref|YP_003929376.1| thymidylate kinase [Helicobacter pylori SJM180]
 gi|308061163|gb|ADO03059.1| thymidylate kinase [Helicobacter pylori SJM180]
          Length = 191

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E  R + L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKIGENLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +HVE+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q ++P+  I+L +  + GLK+   R SL+
Sbjct: 106 ATQSILPEKIILLVIDEE-GLKQ---RLSLK 132


>gi|210135641|ref|YP_002302080.1| thymidylate kinase [Helicobacter pylori P12]
 gi|238057699|sp|B6JNX2|KTHY_HELP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|210133609|gb|ACJ08600.1| thymidylate kinase [Helicobacter pylori P12]
          Length = 191

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 28/179 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK     K  +   T+EPGGT   E+ R + L+  + E   
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKN----KFKNALFTKEPGGTKIGESLRRIALNENISEL-- 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E K+++ DR L S  AY     SS  L L     ++
Sbjct: 55  -ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYS--EFSSLELNL-----LA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            Q ++P   ++L +  + GLK+   R SL+    LD  E + +       +  L I RN
Sbjct: 107 TQSILPTKIVLLLIDKE-GLKQ---RLSLK---SLDKIENQGI-------EKLLTIQRN 151


>gi|281490597|ref|YP_003352577.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
 gi|161702099|gb|ABX75570.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
          Length = 199

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            L I FEG++G+GKTT I +L ++ + K  +V  T++P      +      L  G+    
Sbjct: 3   NLLIVFEGLDGSGKTTQIDMLHQWFENKKLEVFTTKQPTDYYRNDKRVRDYLDNGIAP-N 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
             + A++ AA R   + + I P + E  I +CDR+L SS A+   R  D  + L ++   
Sbjct: 62  MYSIALLAAADRTYQISSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEILMINKGV 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I      PD T+ LD+P +  L+RV+     R+   + Y E K+ ++  + RQ FLD+ 
Sbjct: 121 PI------PDVTVFLDVPPERALERVRQ----RDGEDIKY-EEKNELVFNQVRQNFLDVL 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P    IVDS      V   I N V E++ K
Sbjct: 170 ---PKNALIVDSTLGIDKVHQIITNFVSEVMGK 199


>gi|162449104|ref|YP_001611471.1| putative thymidylate kinase [Sorangium cellulosum 'So ce 56']
 gi|161159686|emb|CAN90991.1| putative Thymidylate kinase [Sorangium cellulosum 'So ce 56']
          Length = 208

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 10/155 (6%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDEFGA 64
           FEGI+GAG +T        L+     VHVTREP   P     R VL       G  +  A
Sbjct: 3   FEGIDGAGTSTQAERFAAHLRAARRMVHVTREPSAGPVGALLRQVLTHRISLPGARQ--A 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL 120
           E  A++F+A RLDH+   I P L +G +++ DR+  SS AYQ    GE  +     ++ +
Sbjct: 61  EIMALLFSADRLDHLGAEIEPLLRDGYVVISDRYDLSSLAYQSTTAGEDGAGSGAIVEWI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           +E++   + PD T+++D+  +I  KR + R    E
Sbjct: 121 RELNRHALRPDVTVVIDVAPEIAEKRRRGRGGAEE 155


>gi|146320508|ref|YP_001200219.1| thymidylate kinase [Streptococcus suis 98HAH33]
 gi|145691314|gb|ABP91819.1| Thymidylate kinase [Streptococcus suis 98HAH33]
          Length = 169

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 4/162 (2%)

Query: 47  AEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
           AE  R+++L+        + E ++F AAR  H++  I P L +GK+LL DRF+DSS AYQ
Sbjct: 4   AEEIRNIILNPANTAMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQ 63

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
           G         +  L + +   + PD T+  D+  + GL R+  R + R+   LD  E+ D
Sbjct: 64  GFGRGLDIGDIHWLNQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD 121

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +H + RQ +L I   +P+R   +D++   ++V  N L ++
Sbjct: 122 --MHRRVRQGYLSILEQEPERFVKIDASQPLEAVVANALAVI 161


>gi|197294491|ref|YP_001799032.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853818|emb|CAM11759.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 23/221 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     +   + 
Sbjct: 6   ISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISLKT 63

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           + ++  A  L   + +I PAL+ G ++L DR+  S++AYQ + +     ++D   +I+ +
Sbjct: 64  KYLLSLANMLQTQDELIFPALLSGYLVLVDRWYGSTFAYQSKGN-----YIDYDDKITSK 118

Query: 127 -----EVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYFERKDVMIHEKRRQIF 177
                 + P  T  LD+   IG++R QN    +  L E   L+YF  K+V  H   +Q +
Sbjct: 119 IINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHKLDLIERKPLNYF--KNVRAHYLNQQKY 176

Query: 178 LDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
            + +  +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 177 CNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|108757704|ref|YP_630801.1| putative thymidylate kinase [Myxococcus xanthus DK 1622]
 gi|108461584|gb|ABF86769.1| putative thymidylate kinase [Myxococcus xanthus DK 1622]
          Length = 566

 Score = 81.6 bits (200), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 14/198 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           +FI FEGI+G+GKTT  +LL   L+R  Y V   RE G    PAA   R +     + E 
Sbjct: 1   MFIDFEGIDGSGKTTLSNLLAAKLKRLGYRVAHAREGGELQAPAARRIRELTRDSRLLEM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121
               E  +  A     ++ V+ PAL  G++ + DR+L S  A  G     + L +D L+ 
Sbjct: 61  SPRTEFFLNLARDAQQLDEVVAPALSRGEVCITDRYLYSQLALSG---GGRGLPMDELRP 117

Query: 122 --EISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVM---IHEKRRQ 175
             E++ Q + PD  I++D  VD  L R++ R   L+     D   RK ++   +  + R+
Sbjct: 118 ACELASQGLWPDLVILVD--VDPDLARLRKRLGKLQSKRVSDGDSRKGLVGAGLAVRVRE 175

Query: 176 IFLDIARNQPDRCHIVDS 193
            FL++AR  P R  I+++
Sbjct: 176 SFLEMARKDPQRWIILEN 193


>gi|15646083|ref|NP_208265.1| thymidylate kinase [Helicobacter pylori 26695]
 gi|6016459|sp|O26009|KTHY_HELPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|2314650|gb|AAD08513.1| thymidylate kinase (tmk) [Helicobacter pylori 26695]
          Length = 191

 Score = 81.6 bits (200), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 23/164 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R + L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKDRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           + Q V+P   IIL L    GLK+   R SL+    LD  E + +
Sbjct: 106 ATQSVLP-AKIILLLIDKEGLKQ---RLSLK---SLDKIENQGI 142


>gi|254779984|ref|YP_003058091.1| thymidylate kinase [Helicobacter pylori B38]
 gi|254001897|emb|CAX30150.1| Thymidylate kinase (dTMP kinase) [Helicobacter pylori B38]
          Length = 191

 Score = 81.3 bits (199), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R + L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKNRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +HVE+VI+PAL E K+++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYS--EFSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q ++P+  ++L +  + GLK+   R SL+
Sbjct: 106 ATQSILPEKIVLLVIDEE-GLKQ---RLSLK 132


>gi|148241353|ref|YP_001226510.1| thymidylate kinase [Synechococcus sp. RCC307]
 gi|166223123|sp|A5GQJ8|KTHY_SYNR3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147849663|emb|CAK27157.1| Thymidylate kinase [Synechococcus sp. RCC307]
          Length = 212

 Score = 81.3 bits (199), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 7/168 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58
           G F+  EGI+G GKTT +  L  +L           +  TREPGGT   +A R +LL   
Sbjct: 3   GRFLVLEGIDGCGKTTQLKALADWLPASGLMPSGAQLITTREPGGTALGQALRQLLLHPP 62

Query: 59  VDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            ++  A  AE +++AA R  HV+  + PAL  G  +L DR+  S+ AYQG         +
Sbjct: 63  EEQAPATRAELLLYAADRAQHVQTRLEPALAAGDWVLSDRYCGSTAAYQGYGRGLDLDLI 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164
             L++++   + PD  + L+L  ++  +R   +   R E+  L +  R
Sbjct: 123 TQLEQLATAGLQPDLCLWLELSPELAAQRRSGQQQDRIEAEGLAFLAR 170


>gi|312137024|ref|YP_004004361.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
 gi|311224743|gb|ADP77599.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
          Length = 189

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I  EGI+GAGK+  + LL   L++  Y V   +EP  +   +  R +L      E   
Sbjct: 1   MYICIEGIDGAGKSLQVKLLSEKLKKCGYKVIQIKEPTDSEIGKLIRKLLRK----EVNN 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++FAA R+   E  I+  L +G +++ DR L SS+ YQ     S  +  D ++E++
Sbjct: 57  ALMTLLFAADRIILSEK-IKKLLKKGYLVISDRCLWSSFVYQ-----SIDIGEDWVEEVN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD TI LD+ VD+ +KR + +     S+ L+   RK + + +K   I        
Sbjct: 111 KYALKPDITIFLDVDVDVAMKRCEKKEIFENSSYLNKARRKYLQLAKKHNFI-------- 162

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                I+D+ +  ++V   IL ++   +QK+
Sbjct: 163 -----IIDANNDIKTVHNEILKVIAAKIQKK 188


>gi|950071|emb|CAA83746.1| ATP-bind. pyrimidine kinase [Mycoplasma capricolum subsp.
          capricolum ATCC 27343]
          Length = 98

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 56/83 (67%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1  MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60

Query: 65 EAEAIVFAAARLDHVENVIRPAL 87
            EA++F A+R  H++ VI+PAL
Sbjct: 61 WTEALLFIASRNQHLQKVIKPAL 83


>gi|308064233|gb|ADO06120.1| thymidylate kinase [Helicobacter pylori Sat464]
          Length = 191

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++G GK+T + LLK RF      +   T+EPGGT   E  R + L+  + E  
Sbjct: 1   MYVVLEGVDGVGKSTQVGLLKDRF-----KNALFTKEPGGTRMGEHLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H+E+VI+PAL E K+++ DR L S  AY      SQ   L+ L  +
Sbjct: 55  --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q V+PD  I+L +  + GLK+   R SL+    LD  E +         +  L I + 
Sbjct: 106 ATQSVLPDKIILLLIDKE-GLKQ---RLSLK---SLDKIENQGT-------EKLLTIQQK 151

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
                H +      + +  +    VW+L
Sbjct: 152 LKTHAHALKEKFGCEVLELDAQKSVWDL 179


>gi|307718813|ref|YP_003874345.1| thymidylate kinase [Spirochaeta thermophila DSM 6192]
 gi|306532537|gb|ADN02071.1| thymidylate kinase [Spirochaeta thermophila DSM 6192]
          Length = 242

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 14/171 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+ FEGI+GAG TT +  +   L+ + + +  TREP   P     R  L S G+  F A 
Sbjct: 43  FVVFEGIDGAGTTTQLGKVASSLKGRGHTLWETREPTDGPVGTFIRECLAS-GLS-FPAS 100

Query: 66  AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A +FAA R  HV  E+ +   +  G+I+LCDR+L SS AYQ +   ++ L    ++++
Sbjct: 101 VYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQSDSAHTREL----VEDL 156

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + +  +P+  I LD PV+  L+R+ +R         D FE+++V+++   R
Sbjct: 157 NRRFPLPEVVIYLDTPVEECLRRLSSR------PRKDLFEQREVLMNVASR 201


>gi|320354474|ref|YP_004195813.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032]
 gi|320122976|gb|ADW18522.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032]
          Length = 206

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 2/107 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G+ I+FEGI+G GK+T + LL  +L+ + Y V  TREP   P  +  R  LL     
Sbjct: 1   MSGGILIAFEGIDGTGKSTQLPLLAAYLRGQGYTVVETREPTDGPYGQQIR--LLYRNRH 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
           +   E E  +F   R  HVE  I+PAL  G I+L DR+  S+ AYQG
Sbjct: 59  QASPEQELELFLLDRRQHVEQCIKPALARGAIVLTDRYYFSTAAYQG 105


>gi|313622095|gb|EFR92678.1| thymidylate kinase [Listeria innocua FSL J1-023]
          Length = 136

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 6/133 (4%)

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEISVQEVMPDC 132
           AR  HV   IRPAL  GK +LCDRF+DSS AYQG  RD +    L  +   ++++ +PD 
Sbjct: 1   ARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLYAIEDTIPDR 59

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
           T  LD+P ++GL R+      RE   LD   ++D+  HEK +  +  I +  PDR   VD
Sbjct: 60  TYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQNGYEKIIQMFPDRFMRVD 115

Query: 193 SAHSFQSVATNIL 205
           +  + + +   IL
Sbjct: 116 ATKTPEEITDIIL 128


>gi|108563864|ref|YP_628180.1| thymidylate kinase [Helicobacter pylori HPAG1]
 gi|123373654|sp|Q1CRB6|KTHY_HELPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|107837637|gb|ABF85506.1| thymidylate kinase [Helicobacter pylori HPAG1]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 23/162 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++G GK+T + LLK RF      +   T+EPGGT   E+ RH+ L+  + E  
Sbjct: 1   MYVVLEGVDGVGKSTQVGLLKDRF-----KNALFTKEPGGTKMGESLRHIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H E+VI+PAL E ++++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYS--EFSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           + Q V+P   I+L +  + GLK+   R SL+    LD  E +
Sbjct: 106 ATQSVLPAKIILLVIDKE-GLKQ---RLSLK---SLDKIENQ 140


>gi|34557029|ref|NP_906844.1| thymidylate kinase [Wolinella succinogenes DSM 1740]
 gi|81653541|sp|Q7M9X1|KTHY_WOLSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|34482744|emb|CAE09744.1| INTEGRAL MEMBRANE PROTEIN WITH KINASE ACTIVITY [Wolinella
           succinogenes]
          Length = 190

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 12/159 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EG++  GK+T I+LLKR      +    T+EPGGT      R +LL  G +   A
Sbjct: 1   MYVAIEGVDTCGKSTQIALLKRRFPGAIF----TKEPGGTALGMKLRELLL--GGEAKSA 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R +H+E VI+PAL   K+L  DR L S  AY    D    L+L SL   +
Sbjct: 55  KAELLLFLADRAEHMELVIKPAL--DKLLFSDRSLISGMAYAKGWD---ELWLKSLNLFA 109

Query: 125 VQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYF 162
            + ++PD  +IL+L   ++  +  Q  +   ES  ++Y 
Sbjct: 110 TEGIVPDKVVILELTAKELSYRLSQKSHDSIESRGVEYL 148


>gi|307638129|gb|ADN80579.1| Thymidylate kinase [Helicobacter pylori 908]
 gi|325996729|gb|ADZ52134.1| Thymidylate kinase [Helicobacter pylori 2018]
 gi|325998323|gb|ADZ50531.1| Thymidylate kinase [Helicobacter pylori 2017]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 20/151 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R++ L+  + E  
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKTRF-----KNALFTKEPGGTRMGESLRYIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H E+VI+PAL E K+++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYS--EFSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           + Q ++P   ++L +  + GLK+   R SL+
Sbjct: 106 ATQSILPTKIVLLVIDEE-GLKQ---RLSLK 132


>gi|225620556|ref|YP_002721813.1| thymidylate kinase [Brachyspira hyodysenteriae WA1]
 gi|254808280|sp|C0R1X1|KTHY_BRAHW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225215375|gb|ACN84109.1| thymidylate kinase [Brachyspira hyodysenteriae WA1]
          Length = 203

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 19/218 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EGI+G+GK++   +L   L         T EP         R  +LS    +  
Sbjct: 3   GKLIVLEGIDGSGKSSIGMMLTDILNNIGIKSIYTFEPTHAYYGSKLRESMLS---KDLT 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  +F A R +H++++IRPA+ +G +++ DR++ SS AYQG +   +  ++ +L + 
Sbjct: 60  PEEELSLFIADRKEHIKHMIRPAINDGYVIVLDRYMHSSIAYQGAKGIDKE-YIYNLHKD 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + E  PD   IL L ++  L R+     + +   +D FE K  +  E+  +IF   + N
Sbjct: 119 FILE--PDLVFILHLNIETALNRI-----MEKRGFVDRFENKHYL--EEVDKIFS--SFN 167

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           +P   H +D++   +S+   ILN + E    ++ PL S
Sbjct: 168 EP-YMHHIDASKDQKSICDEILNTIKE---SKILPLDS 201


>gi|315187239|gb|EFU20996.1| thymidylate kinase [Spirochaeta thermophila DSM 6578]
          Length = 215

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 14/167 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+ FEGI+GAG TT +  +   L+ + + +  TREP   P     R  L S G+    A 
Sbjct: 16  FVVFEGIDGAGTTTQLRKVASSLKGRGHPLWETREPTDGPVGVFIRECLAS-GLS-LPAS 73

Query: 66  AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A +FAA R  HV  E+ +   +  G+I+LCDR+L SS AYQ + D ++ L    ++++
Sbjct: 74  VYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQSDSDHTREL----VEDL 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           + +  +P+  I LD PV+  L+R+ +R         D FE+++V+++
Sbjct: 130 NHRFPLPEVVIYLDTPVEECLRRLSSR------PQKDLFEQREVLMN 170


>gi|317014888|gb|ADU82324.1| thymidylate kinase [Helicobacter pylori Gambia94/24]
          Length = 191

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 23/164 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           ++++ EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R + L+  + E  
Sbjct: 1   MYVALEGVDGAGKSTQVELLKTRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A +F + R +H E+VI+PAL E ++++ DR L S  AY     SS  L L     +
Sbjct: 55  --ARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYSA--FSSLELNL-----L 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           + Q ++P   ++L +  + GLK+   R SL+    LD  E + +
Sbjct: 106 ATQNILPTKIVLLLIDKE-GLKQ---RLSLK---SLDKIENQGI 142


>gi|296126817|ref|YP_003634069.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
 gi|296018633|gb|ADG71870.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
          Length = 203

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 13/175 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I  EGI+G+GK+TH  LL   L         T EP         R  +LS    + 
Sbjct: 2   NGKLIVIEGIDGSGKSTHGMLLTNELNNIGIKSIYTFEPTHAYFGSKLRESMLS---KDL 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E  +F A R +HV+N+I+PA+ +G  ++ DR++ SS AYQG +   +    +  ++
Sbjct: 59  KPEEELSLFIADRKEHVQNMIKPAINDGYAVILDRYMYSSIAYQGAKGIDREYIYNLHKD 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             ++   PD   I  LP++  L R+     + +   +D FE K+ +  +K  +IF
Sbjct: 119 FIIE---PDLVFIFHLPIETALNRI-----MEKRGFVDRFENKNYL--KKVDEIF 163


>gi|215400691|ref|YP_002332309.1| putative thymidylate kinase [Lactococcus lactis]
 gi|169641050|gb|ACA61269.1| putative thymidylate kinase [Lactococcus lactis]
          Length = 251

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 18/213 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            L I FEG++G+GKTT I +L ++ + K   V  T++P      +      L  G+    
Sbjct: 55  NLLIVFEGLDGSGKTTQIDMLYQWFENKKLKVFTTKQPTDYYRNDKRVRDYLDNGIAP-N 113

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
             + A++ AA R   + + I P + E  I +CDR+L SS A+   R  D  + L ++   
Sbjct: 114 MYSIALLAAADRTYQITSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEILMINK-- 170

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD T+ LD+P +  L RV+     R+   + Y E K+ ++  + RQ FLD+ 
Sbjct: 171 ----GVPTPDVTVFLDVPPERALDRVRQ----RDGKDIKY-EEKNELVFNQVRQNFLDVL 221

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P    IVDS      V   I N V E++ K
Sbjct: 222 ---PKNALIVDSTLGIDKVHQIITNFVSEVMDK 251


>gi|76801882|ref|YP_326890.1| thymidylate kinase [Natronomonas pharaonis DSM 2160]
 gi|121695514|sp|Q3IRB3|KTHY_NATPD RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|76557747|emb|CAI49330.1| thymidylate kinase [Natronomonas pharaonis DSM 2160]
          Length = 196

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 24/215 (11%)

Query: 5   LFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I+ EGI+G+GK+T H +L +R    +      TREP  +    A    +     D   
Sbjct: 1   MLITLEGIDGSGKSTAHAALRERLTAEET---TFTREPTDSWYGSAVERSIGDADADPL- 56

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE  ++ A   DH+  V+RPAL  G+ ++ DR+ DS YAYQG   + + +  + +  +
Sbjct: 57  --AELFLYTADHADHLSRVVRPALEAGEPVVSDRYSDSRYAYQGA--TLEGVIDEPMAYV 112

Query: 124 S-VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             V E     PD T+  D+P  +G +R         +   + FE  D +  E  R+ +  
Sbjct: 113 KRVHEPFTRPPDATLYFDVPPTVGAER---------AGATNKFEAADYL--ESVRENYER 161

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   +P+R H +D+  S  +V    +  V  L+ +
Sbjct: 162 LIEAEPERFHRIDATQSESAVVEAAVETVETLLSR 196


>gi|126179517|ref|YP_001047482.1| thymidylate kinase [Methanoculleus marisnigri JR1]
 gi|166221756|sp|A3CVV0|KTHY_METMJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|125862311|gb|ABN57500.1| thymidylate kinase [Methanoculleus marisnigri JR1]
          Length = 205

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 16/202 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G+GK+T ++ L+      + D   TREPG T   E+ R  +     +    
Sbjct: 1   MLITIEGIDGSGKSTLLARLR--ELLADLDPLFTREPGATWVGESVRRAI----AERMDP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQEI 123
             EA++F A    H++ VIRPAL EG++++ DR+ DS +AYQ    D      L  L+ I
Sbjct: 55  ITEALLFCADHAAHIDTVIRPALDEGRLVISDRYADSRFAYQPVVLDGVLPDPLSWLRRI 114

Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T +L LPV+  + R      L      +YFE  +  I E+ ++ +L++A 
Sbjct: 115 HEGWSIRPDRTFLLVLPVEDAVSR------LGPEKKREYFE--NAAILEQVQENYLNLAA 166

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
             P R  +VD+    + VA  I
Sbjct: 167 ADPLRFVVVDALLPKEEVARFI 188


>gi|126642563|ref|YP_001085547.1| thymidylate kinase [Acinetobacter baumannii ATCC 17978]
          Length = 151

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 12/147 (8%)

Query: 53  VLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           +LL+   DE    + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ    S
Sbjct: 1   MLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---S 57

Query: 112 SQHLFLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            + L  D LQ ++   V  MP+ T  LD P+++G+ R       RE   LD FE++ +  
Sbjct: 58  GRGLSQDKLQLLNQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSF 111

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHS 196
             K R+ +  + + +P+R   +D+  S
Sbjct: 112 FTKVREGYETLWKVEPERIKRLDATQS 138


>gi|298674964|ref|YP_003726714.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
 gi|298287952|gb|ADI73918.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
          Length = 199

 Score = 78.6 bits (192), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 108/210 (51%), Gaps = 22/210 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+ EGI+G+GK+T   + +R +   +  +V  TREP      +A    + S   D+ 
Sbjct: 3   GKLITLEGIDGSGKST---ITERLMNHPSLSNVVFTREPTKNWIGKAVEQAIRS-DTDQI 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +F +   +H+   I PA+  GK ++ DR+LDS  AYQG   S +  F D ++ 
Sbjct: 59  ---AEFFLFTSDHAEHISKTIYPAIENGKNVISDRYLDSRCAYQGVTLSEK--FEDPIKW 113

Query: 123 ISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +        ++PD TI LD+  +  ++R  NR    +   +++ ++    +++  +++  
Sbjct: 114 VQKIHDGWTIIPDLTIFLDIDPEFAIERCGNRGEQTKFEKMEFLQQ----VYDNYQRLM- 168

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              ++ P+R  +VDS+   + V  ++++I+
Sbjct: 169 ---KDNPERFVVVDSSQPIEEVEKDVVDII 195


>gi|212213017|ref|YP_002303953.1| thymidylate kinase [Coxiella burnetii CbuG_Q212]
 gi|212218894|ref|YP_002305681.1| thymidylate kinase [Coxiella burnetii CbuK_Q154]
 gi|215918975|ref|NP_819533.2| thymidylate kinase [Coxiella burnetii RSA 493]
 gi|206583860|gb|AAO90047.2| thymidylate kinase [Coxiella burnetii RSA 493]
 gi|212011427|gb|ACJ18808.1| thymidylate kinase [Coxiella burnetii CbuG_Q212]
 gi|212013156|gb|ACJ20536.1| thymidylate kinase [Coxiella burnetii CbuK_Q154]
          Length = 161

 Score = 78.2 bits (191), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L    
Sbjct: 5   DTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGWV 64

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +A  +
Sbjct: 65  LGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQE 118

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 119 PARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 155


>gi|257052374|ref|YP_003130207.1| thymidylate kinase [Halorhabdus utahensis DSM 12940]
 gi|256691137|gb|ACV11474.1| thymidylate kinase [Halorhabdus utahensis DSM 12940]
          Length = 199

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 20/215 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G+GK++    L+      + D   TREP  +   EA   V  S   D+  +
Sbjct: 1   MLITLEGIDGSGKSSAWESLREHAADLDPDFTFTREPTESWYGEA---VQRSIQEDDADS 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLDSL 120
            AE  ++ A    H+ N ++PAL  G++++ DR+ DS YAYQG    +R      F+  +
Sbjct: 58  LAELFLYTADHAAHLANTVQPALDRGEVVVSDRYSDSRYAYQGATLEDRLDDPLAFVREI 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E   +   PD TI LD+  + G +R         S   + FER + +     R  +  +
Sbjct: 118 HEPWTRP--PDATIYLDVDAETGAER---------SGGTNKFERVEHL--RAVRANYERL 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             + PDR   +D+  + ++V  ++ + V  L+ ++
Sbjct: 165 IDDDPDRFVRIDATRAAEAVRADVFDAVERLLSEQ 199


>gi|301305668|ref|ZP_07211757.1| thymidylate kinase [Escherichia coli MS 124-1]
 gi|300839096|gb|EFK66856.1| thymidylate kinase [Escherichia coli MS 124-1]
          Length = 134

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 5/116 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L   S G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLF 116
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQ G R   QH+ 
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHML 120


>gi|116754547|ref|YP_843665.1| dTMP kinase [Methanosaeta thermophila PT]
 gi|116665998|gb|ABK15025.1| thymidylate kinase [Methanosaeta thermophila PT]
          Length = 202

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 33/226 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ I+ EGI+GAGKTT    + R L+++  D   TREP   P  E AR    + G ++
Sbjct: 4   DRGILITLEGIDGAGKTT----VARMLRKRFPDFVFTREPTDGPLGEMARR---ASGFEQ 56

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLD 118
                   +F A   +H+ + I P++  G++++ DR++DS  AYQG    R  S     +
Sbjct: 57  L------FLFMADHANHLRSCILPSINSGEVVVSDRYIDSRVAYQGALLRRTISMEWIYE 110

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-- 176
             +  S   +MPD T++  +   + L R +NR           FE + ++     R +  
Sbjct: 111 LHRPWS---LMPDLTLLFRIDPSVALMRCKNR------GATSIFEMEALL-----RDVSG 156

Query: 177 -FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            F  +A  +P+R  I+++      VA    + +   +Q+    L S
Sbjct: 157 NFEILASREPERFVIINAEREISEVAERAASEIERFIQQNERQLGS 202


>gi|88603867|ref|YP_504045.1| thymidylate kinase [Methanospirillum hungatei JF-1]
 gi|121696415|sp|Q2FS90|KTHY_METHJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|88189329|gb|ABD42326.1| thymidylate kinase [Methanospirillum hungatei JF-1]
          Length = 206

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 24/223 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+G+GK+T    L  +L   + +  +T EPG T   EA R  +     +    
Sbjct: 1   MLVTIEGIDGSGKSTLHKALGPYL--ADLNPVITCEPGSTWIGEAVRRAIR----EHADP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AEA++F A    H+  V+RPAL E ++++ DR++DS   YQ  + +   +  D    + 
Sbjct: 55  IAEALLFVADHAAHLREVVRPALSEDRLVISDRYIDSRLVYQ--QVTLDGIIPDPRTWLR 112

Query: 125 V----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  +MPD TI+L +PV + L+R   R S       ++FE++ V+   K ++ ++ +
Sbjct: 113 AVHQGWTIMPDLTILLAVPVPVALERTGKRGS------GEHFEQESVLT--KVQEYYMQL 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
                 R  I+D     +    +IL +  E ++ R   ++ KK
Sbjct: 165 VEEDTARFLILDGTLPPE----HILKVAGEAIRFRFDEMNRKK 203


>gi|284163929|ref|YP_003402208.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511]
 gi|284013584|gb|ADB59535.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511]
          Length = 205

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT    +   LQ +  D   TREP  T  +     V  S   D+  +
Sbjct: 1   MLVTLEGLDGSGKTT----VWEALQERYPDAVFTREP--TNDSWYGDAVYRSIRDDDADS 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE- 122
            AE  ++ A   DH+  VI PAL  G ++L DR+ DS +AYQG   ++S  L +D   E 
Sbjct: 55  LAELFLYTADHADHLSRVIEPALEAGDLVLSDRYSDSRFAYQGATLEASDRLAVDDHLEY 114

Query: 123 -ISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + V E   + PD TI LD+  +   +R         +   + FER D +  E  R  + 
Sbjct: 115 VVDVHEPFSIPPDLTIYLDVDPETAAER---------AGATNKFERVDYL--ESVRDNYE 163

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +   +PDR   +D+     +V   +L  +
Sbjct: 164 RLLEREPDRFVRIDATQEPDAVLEAVLGTL 193


>gi|195952508|ref|YP_002120798.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932120|gb|ACG56820.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
          Length = 200

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 20/202 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEGI+G+GK+T I+++   L+ +N  V + REPG T   E  R +L S  +D    + 
Sbjct: 12  IVFEGIDGSGKSTQINIVYELLKYEN--VKLLREPGSTEMGEKIRDILKSQKLD---PKT 66

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +  +  A+R   +E   +    EG ILL DR++ S+ AYQG        FL +L +    
Sbjct: 67  QTFLIEASRAHMIEKHFKG--FEG-ILLLDRYIYSTIAYQGYGFGIDINFLKALNDFVCD 123

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
             +PD   + D+     L+R++     RE    D FE  D+   +K R  +L +A+    
Sbjct: 124 IYIPDIVFLFDIDPRTALERLK-----REK---DMFE--DLEFLKKVRDGYLKLAKEY-- 171

Query: 187 RCHIVDSAHSFQSVATNILNIV 208
             + +D++ + +++   I NI+
Sbjct: 172 NFYTIDASKNVEAITNEITNIL 193


>gi|289644563|ref|ZP_06476634.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
 gi|289505631|gb|EFD26659.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
          Length = 210

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 9/136 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G F++ +G  G GK+T  + L   L  +   V  T+EP  +P     R      G D
Sbjct: 1   MNRGFFVAIDGPSGIGKSTVTAALAGQLAGQGLPVLATKEPTASPLGSLTRF-----GTD 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           ++   A A + AA R  H+E  IRPAL  G +++CDR++ SS   Q   D     FL +L
Sbjct: 56  DYQGLALACLVAADRYQHLETEIRPALASGTVVVCDRYVASSLVLQ-RLDGVPPKFLWAL 114

Query: 121 QEISVQEVMPDCTIIL 136
            E   Q   PD T+IL
Sbjct: 115 AE---QADRPDLTVIL 127


>gi|197122531|ref|YP_002134482.1| dTMP kinase [Anaeromyxobacter sp. K]
 gi|196172380|gb|ACG73353.1| dTMP kinase [Anaeromyxobacter sp. K]
          Length = 219

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 10/165 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----SCGVD 60
           F+  EG++GAG TT   LL   L+      HVT EP G P     R VL      + G D
Sbjct: 18  FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGAAGAD 77

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F   A A++FAA R DH    I P L  G  ++ DR+  SS AYQG         ++ +
Sbjct: 78  -FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWV 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           ++++     PD T+ L +  ++ L+R +     RE   +  F+RK
Sbjct: 133 RQVNGAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRK 177


>gi|15668468|ref|NP_247266.1| thymidylate kinase [Methanocaldococcus jannaschii DSM 2661]
 gi|2497577|sp|Q57741|KTHY_METJA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|1591015|gb|AAB98278.1| thymidylate kinase (tmk) [Methanocaldococcus jannaschii DSM 2661]
          Length = 188

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 24/181 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +FI FEGI+G+GKTT   LL      K  D   T EP  +   +  R +L   G  
Sbjct: 1   MVDNMFIVFEGIDGSGKTTQSKLL-----AKKMDAFWTYEPSNSLVGKIIREIL--SGKT 53

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   +  A++FAA R++H + +I+  L +  + +CDR+L SS AYQ      ++ F+ S+
Sbjct: 54  EVDNKTLALLFAADRIEHTK-LIKEELKKRDV-VCDRYLYSSIAYQSVAGVDEN-FIKSI 110

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +++   PD   +L + ++  LKRV+ +         D FE+KD +  +K +  +L++
Sbjct: 111 NRYALK---PDIVFLLIVDIETALKRVKTK---------DIFEKKDFL--KKVQDKYLEL 156

Query: 181 A 181
           A
Sbjct: 157 A 157


>gi|254166701|ref|ZP_04873555.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|289596133|ref|YP_003482829.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|197624311|gb|EDY36872.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|289533920|gb|ADD08267.1| thymidylate kinase [Aciduliprofundum boonei T469]
          Length = 197

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 19/208 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GK+T    + + L    +D+ +T EP  T   +  R  +     +E   
Sbjct: 1   MFIVFEGIDGSGKSTIARRIAKHLSSLGHDIFLTEEPTTTWMGKDVRRAI----EEEKNP 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            ++A++F A R +HVE  I+  L +GKI++ DR++ S++AYQG +         +L+ + 
Sbjct: 57  LSQALLFFADRAEHVE-AIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115

Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            V E M   PD  I+L +    GL  V  R   +E      FER++ +  E+ + I++D+
Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR-DFKEK-----FEREEFL--ERVQDIYMDL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A        +VDS  +   V  ++  I+
Sbjct: 168 ADKYG--FFVVDSNRNLNEVYEDVRKII 193


>gi|86158146|ref|YP_464931.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774657|gb|ABC81494.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 218

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGV 59
           G F+  EG++GAG TT   LL   L+      HVT EP G P     R VL       G 
Sbjct: 15  GRFVVVEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVGGGGG 74

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +F   A A++FAA R DH    I P L  G  ++ DR+  SS AYQG         ++ 
Sbjct: 75  ADFDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEW 130

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           ++ ++     PD T+ L +  ++ L+R +     RE   +  F+R+
Sbjct: 131 VRTVNAAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRR 176


>gi|15639345|ref|NP_218794.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025587|ref|YP_001933359.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14]
 gi|23821760|sp|O83373|KTHY_TREPA RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|3322633|gb|AAC65341.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189018162|gb|ACD70780.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14]
 gi|291059744|gb|ADD72479.1| thymidylate kinase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 208

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 10/147 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+ FEGI+G G +T +  L+R  Q +  D+  T+EP G       R VL    +    ++
Sbjct: 7   FVVFEGIDGTGTSTQLRALERHFQARK-DMVFTQEPTGGEIGTLIRDVLQKRVI--MSSK 63

Query: 66  AEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  ++FAA R +H+E    I   L EGKI+LCDR++ SS  YQG   S    +     E+
Sbjct: 64  ALGLLFAADRHEHLEGAGGINDCLAEGKIVLCDRYVFSSLVYQGMAVSGSFAY-----EL 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150
           + +  +P+     D P+++ ++R+  R
Sbjct: 119 NKEFPLPEVVFYFDAPIEVCVERITAR 145


>gi|296109540|ref|YP_003616489.1| thymidylate kinase [Methanocaldococcus infernus ME]
 gi|295434354|gb|ADG13525.1| thymidylate kinase [Methanocaldococcus infernus ME]
          Length = 184

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 24/178 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT   +L + L       + T EP         R  L S  +D    
Sbjct: 1   MFIVFEGIDGSGKTTLSKMLAKELSG-----YWTCEPTDGEIGRLIRSYLSSGNIDNISL 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              +++FAA R++H +  I   L  G+ ++CDR+L SS AYQ      ++     L EI+
Sbjct: 56  ---SLLFAADRVEHCKE-IEKVLNSGRDVICDRYLYSSIAYQSSLGVEENF----LWEIN 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              + PD   +L + VD  +KRV+ +         D FE K+ +  EK ++ +L++A+
Sbjct: 108 KYAIKPDLVFLLVVDVDEAMKRVKGK---------DIFENKNFL--EKVQEKYLELAK 154


>gi|220917316|ref|YP_002492620.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955170|gb|ACL65554.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 219

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 10/165 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-----CGVD 60
           F+  EG++GAG TT   LL   L+      HVT EP G P     R VL        G D
Sbjct: 18  FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGVAGAD 77

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F   A A++FAA R DH    I P L  G  ++ DR+  SS AYQG         ++ +
Sbjct: 78  -FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWV 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           ++++     PD T+ L +  ++ L+R +     RE   +  F+RK
Sbjct: 133 RQVNGAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRK 177


>gi|256372673|ref|YP_003110497.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009257|gb|ACU54824.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 194

 Score = 75.9 bits (185), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 20/200 (10%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            +G +  GK+T + L    ++ +  DV   R+PGG PAAEA R V+ +  +  +   AE 
Sbjct: 3   LDGPDKVGKSTQVHLAVAAVRARGVDVVTARDPGGDPAAEALREVVKTRSLAPW---AEL 59

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           + FAAAR   V  V+RPA+  G  ++ DR+  S+  YQG +     ++  +L+ ++   V
Sbjct: 60  LTFAAARAQLVATVVRPAVEAGTHVILDRYFPSTIVYQGPKVGEDAIW--ALEALTGDPV 117

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
             D  ++LD    +GL               D FE       E+ R  + D AR+   R 
Sbjct: 118 A-DLVLVLDRAEPLGLD------------AGDRFEAGGRSAWEQIRARYADRARSWGWR- 163

Query: 189 HIVDSAHSFQSVATNILNIV 208
            +VD+  S  +VA  +  ++
Sbjct: 164 -LVDANGSRDAVAARVQAMI 182


>gi|302543876|ref|ZP_07296218.1| dTMP kinase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461494|gb|EFL24587.1| dTMP kinase [Streptomyces himastatinicus ATCC 53653]
          Length = 256

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 9/148 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+F++ +G  G GK+T  + +   L+      H TREP  T     AR      G D++
Sbjct: 59  TGMFVTIDGPGGVGKSTLTAAVVAELRAACVTAHATREPSDTALGRLARQ-----GTDDY 113

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A A + AA R  H+E+ IRPA+  G +++CDR++ SS   Q        +  D + E
Sbjct: 114 RGMAMACLIAADRYQHLEDEIRPAVARGDVVVCDRYVASSLVLQ----VMDGVGRDLVWE 169

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           ++    MPD  +IL+   D+  KR+  R
Sbjct: 170 LNRHADMPDLAVILNARDDVIEKRLTER 197


>gi|206896205|ref|YP_002246823.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265]
 gi|238057696|sp|B5Y7S6|KTHY_COPPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|206738822|gb|ACI17900.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265]
          Length = 193

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 12/180 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EGI+G GK+T  SLL   + +K    H T EPG        R +++    + F  
Sbjct: 1   MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFH-TFEPGHVRDG-LYRELIMENVDNPF-- 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A +F   R +HV+ +I+PAL +G+ ++C+R+ DS+ AYQG         ++ + E +
Sbjct: 57  -VVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEA 115

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + PD    LD+   + L R+QN+         D  E + +   ++ R+ + +IAR +
Sbjct: 116 IDGLWPDKIFYLDIEPHLALARLQNKEK-------DALEGQGLEFLQRVREGYEEIARTR 168


>gi|258545273|ref|ZP_05705507.1| dTMP kinase [Cardiobacterium hominis ATCC 15826]
 gi|258519486|gb|EEV88345.1| dTMP kinase [Cardiobacterium hominis ATCC 15826]
          Length = 205

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ +G EG GK+T ++ ++ +           REPGGTP  E  R +LL    D  
Sbjct: 2   SGRFITLDGSEGVGKSTQLANIQAWCTAHGITARYGREPGGTPLGERLRAILLDRTTDA- 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  H++  I PAL  G+  + DR+ D++YAYQ    S     L +L+ 
Sbjct: 61  DPLTELLLLLAARRAHLQQTILPALARGEWYISDRYRDATYAYQHYGRSIPLTTLSALET 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
            S  +  PD  +IL    D    R+  R      A  D FE +D 
Sbjct: 121 ASETDRDPDLALILGSSADTARDRLAQR-----GAAQDRFEAEDA 160


>gi|255513737|gb|EET90002.1| dTMP kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 215

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 21/218 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GK+T   +L  +L+        T EP   P  +  + +++S       A
Sbjct: 1   MLIAFEGIDGSGKSTQAEMLDSYLKSSGIAAVTTAEPTSGPIGKLIKEIVVSK--KPINA 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++F A R  H+E  I P++ EGK+++ DR++ S+ AY G        FL     I+
Sbjct: 59  LAMQMLFTADRAYHLETTIMPSISEGKVIITDRYIGSTIAY-GTAAGIDKRFLVG---IN 114

Query: 125 VQEVMPDCTIILDLPVDIGLKR--------VQNRYSLRESACLDYFERKDVMIHEK---- 172
            + + PD T ++D      ++R        ++N+ +L E     + ++    + EK    
Sbjct: 115 RKFIPPDITFVIDANPRKAVERLNRRAAEFLKNKTALMEKDGELFKQKSTTTMFEKLGFL 174

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              R  +L++ ++  +  ++++   S  S++  I+NI+
Sbjct: 175 GRARLAYLEMQKDFKN-YYVINGNRSKGSISKEIINIL 211


>gi|257387466|ref|YP_003177239.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286]
 gi|257169773|gb|ACV47532.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286]
          Length = 198

 Score = 75.1 bits (183), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 21/212 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT    L+R     + D   TREP  +   EA   V  S   DE  +
Sbjct: 1   MLLTLEGLDGSGKTTAWETLQRHAAVPD-DAVFTREPTESWYGEA---VQRSIDDDEADS 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            AE  ++ A   DH+ N I PAL  G++++ DR+ DS YAYQG   S +    D+L  + 
Sbjct: 57  LAELFLYTADHADHLANTIEPALDAGRLVVSDRYSDSRYAYQGATLSDR--LDDALGYVR 114

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +     PD TI LD+  +   +R         S   + FE  D +     R+ +  +
Sbjct: 115 DVHAPWTRPPDATIYLDVDAETAAER---------SGATNKFETADYLA--DVRENYERL 163

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +P+R   +D+    ++V   I   V EL+
Sbjct: 164 IAAEPERFVRIDATRPERAVRAAIEEAVDELL 195


>gi|71083690|ref|YP_266410.1| thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062803|gb|AAZ21806.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 203

 Score = 74.7 bits (182), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 3/100 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEGIEG GK+ HI  +  +L RK       REPGG+  +E  R+++L+     F  E 
Sbjct: 7   IVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSANSEKIRNLILNNK-STFNKET 65

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
           + +++ +AR +++E +IR  + + KI+L DRF DS+ AYQ
Sbjct: 66  DLLLYLSARSENIE-IIRKNVGK-KIILIDRFSDSTIAYQ 103


>gi|330507877|ref|YP_004384305.1| thymidylate kinase [Methanosaeta concilii GP-6]
 gi|328928685|gb|AEB68487.1| thymidylate kinase [Methanosaeta concilii GP-6]
          Length = 211

 Score = 74.7 bits (182), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 117/225 (52%), Gaps = 33/225 (14%)

Query: 4   GLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SC 57
           GL I+ EGI+G+GK+T I    + LK  +  +   + +T EP  + A    R  +L  S 
Sbjct: 3   GLLITLEGIDGSGKSTAIRHIAAKLKELVPERT--LLITAEPSNSAAGRILRSEILREST 60

Query: 58  GVDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           G   F    E + +F A    H+ + I P+L  G I+LCDR+ DS+ AYQG   + + + 
Sbjct: 61  GELSFAEHMEELFLFMADHARHLADTIIPSLEAGAIVLCDRYADSTAAYQGV--TLKGIV 118

Query: 117 LDSLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            D L  + ++E+       PD T++  L   + ++R+ +R S RE      FER++ +  
Sbjct: 119 PDPL--VWIREIYRPWNLRPDRTLLFLLDPQLSVQRISSR-SGREK-----FERQEFL-- 168

Query: 171 EKRRQI---FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              RQ+   F  +A  +P+R  I+D++    +VA + ++ + E++
Sbjct: 169 ---RQVDGNFRRLASLEPERFVIIDASLDEDAVAESAVSSILEML 210


>gi|325923095|ref|ZP_08184788.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865]
 gi|325546410|gb|EGD17571.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865]
          Length = 227

 Score = 74.7 bits (182), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 108/222 (48%), Gaps = 17/222 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARSLATTLEAAGAHVVLSKEPTNGPWGTKLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G+I++ DR+  S  AYQG    +  L LD+L E
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGEIVILDRYFPSMVAYQG----AAGLPLDALLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF  +  
Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRAIFNTL-- 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
            Q    H+VD++    SV      IV   + +R+S  ++  D
Sbjct: 172 -QLPGKHVVDASADADSVLRQAHAIVVAALAERLSDDAAHTD 212


>gi|84489171|ref|YP_447403.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
 gi|121696579|sp|Q2NHE3|KTHY_METST RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|84372490|gb|ABC56760.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
          Length = 195

 Score = 74.7 bits (182), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFG 63
           ++I  EGI+G GKTT    LK +L+++ + V    EP  +   +  R  LL      +  
Sbjct: 1   MYIVLEGIDGVGKTTQTEKLKEWLEKRGFSVKTIVEPTDSDIGKIIREELLKPEATSDTN 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  A++FAA RL   + + +    + KIL+ DR   SS  YQ    +S  +  + + +I
Sbjct: 61  QQMLALLFAADRLTLKDEINQVKNNQQKILISDRSFYSSITYQ----NSTTIEPEWIYKI 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD TIILD+  D  LKR            +D FE K+ +  EK R+ +L + + 
Sbjct: 117 NKHTPRPDLTIILDIDEDEALKRCDK---------IDTFENKEFL--EKTRENYLKLVKT 165

Query: 184 QPDRCHI 190
           + +   I
Sbjct: 166 EKNIVKI 172


>gi|294626717|ref|ZP_06705312.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|294667167|ref|ZP_06732390.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292598965|gb|EFF43107.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292603066|gb|EFF46494.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 227

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLEAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG    +  L LD L E
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF   A 
Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             P + H+VD++    SV      I+   +  R+S  ++  D
Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212


>gi|289808796|ref|ZP_06539425.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
 gi|289829610|ref|ZP_06547165.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 160

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 11/164 (6%)

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           S G +    +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG        
Sbjct: 6   SVGDEVITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQT 65

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKR 173
            L +L++  + +  PD T+ LD+  ++GLKR + R  L   E    D+F R         
Sbjct: 66  MLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT-------- 117

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           R  +L++A  Q  R   +D+     +V  +I   V + VQ++ +
Sbjct: 118 RARYLELA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 160


>gi|321472932|gb|EFX83901.1| hypothetical protein DAPPUDRAFT_315306 [Daphnia pulex]
          Length = 148

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 5/139 (3%)

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131
           AAAR +H+ +++ PAL EGK +LCDRF DS++AYQG        F+++L ++++    PD
Sbjct: 2   AAARREHLRHLVWPALEEGKWVLCDRFSDSTFAYQGFGHELGVSFVETLNQLTMGNFQPD 61

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T I  L  + GL R   + SL      D +ER     H +  + +L +   +  RC  +
Sbjct: 62  LTFIFQLSEEAGLAR--KKESL---VSEDRYERFPEEFHRRVSKGYLALLEAESQRCVPL 116

Query: 192 DSAHSFQSVATNILNIVWE 210
            +  S + +A +I   + E
Sbjct: 117 SAHTSIEVIADHIWRTLAE 135


>gi|325928260|ref|ZP_08189463.1| thymidylate kinase [Xanthomonas perforans 91-118]
 gi|325541350|gb|EGD12889.1| thymidylate kinase [Xanthomonas perforans 91-118]
          Length = 226

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 17/215 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L      V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG    +  L LD L E
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF   A 
Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + P + H+VD++    SV      I+   +  R+S
Sbjct: 172 DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205


>gi|78049663|ref|YP_365838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123583913|sp|Q3BN25|KTHY_XANC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78038093|emb|CAJ25838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 226

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 17/215 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L      V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG    +  L LD L E
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF   A 
Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + P + H+VD++    SV      I+   +  R+S
Sbjct: 172 DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205


>gi|300871563|ref|YP_003786436.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
 gi|300689264|gb|ADK31935.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
          Length = 203

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 17/188 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EGI+G+GK+T    L   L + N +   T EP         R  +LS  +D   
Sbjct: 3   GKLIVIEGIDGSGKSTIAKKLAETLNKNNIETIYTFEPTNAYYGAKLRDTMLSKDMD--- 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E  +F   R +H+  +I+P+L EGK ++ DR++ SS AYQG    ++ + ++ ++ +
Sbjct: 60  LDRELELFVDDRKEHIRLMIKPSLEEGKTVVLDRYMYSSIAYQG----AKGIDIEKIKNM 115

Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD   I  LPV+  L R+     + +   +D FE ++ +  +K   IF   + 
Sbjct: 116 HESFILIPDIVFIFHLPVEKSLNRI-----MEKRGFIDRFENEEYL--KKVDSIFS--SF 166

Query: 183 NQPDRCHI 190
           N+P   HI
Sbjct: 167 NEPFIYHI 174


>gi|163755232|ref|ZP_02162352.1| thymidylate kinase [Kordia algicida OT-1]
 gi|161324652|gb|EDP95981.1| thymidylate kinase [Kordia algicida OT-1]
          Length = 206

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 14/167 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +FI+ EGI+G+GK+T    + + L+ + + V++T EP      +  R +L   G +
Sbjct: 1   MKKNIFIAIEGIDGSGKSTQAKNIAKRLEAEGHKVYLTFEPTDMRIGKMIRSIL--GGQE 58

Query: 61  EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +   +  A +F A RLDH+    N I   L EG  ++ DR+  SSYAY G      H+ +
Sbjct: 59  KADEKVIAALFVADRLDHILHETNGILKKLAEGYTVITDRYYFSSYAYHG-----AHMDM 113

Query: 118 DSL---QEISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLD 160
           D +    +++   + P   I +D+  ++ +KR+  NR ++     LD
Sbjct: 114 DWVIQSNKMAADILKPTVNIFVDVSPEVAMKRINANRETVEIYETLD 160


>gi|302519849|ref|ZP_07272191.1| thymidylate kinase [Streptomyces sp. SPB78]
 gi|302428744|gb|EFL00560.1| thymidylate kinase [Streptomyces sp. SPB78]
          Length = 216

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 9/136 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+ +G  G GK+T ++ L   L+ +   VH T EP  +P  +  R        D
Sbjct: 1   MTAGRFITLDGPGGVGKSTTVAALAGLLRDQGEHVHTTTEPSTSPLGQFTR-----GHAD 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A A + AA R DH+   IRP L  G  ++CDR+L S+   Q      +   LD  
Sbjct: 56  QISGHALACLVAADRYDHINTEIRPRLDAGDTVVCDRYLASTLVVQRLDGVPERFLLDLN 115

Query: 121 QEISVQEVMPDCTIIL 136
            +I    V+PD  ++L
Sbjct: 116 ADI----VLPDVAVLL 127


>gi|91763270|ref|ZP_01265234.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717683|gb|EAS84334.1| Thymidylate kinase  (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 203

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 3/100 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEGIEG GK+ HI  +  +L RK       REPGG+  +E  R+++L+     F  E 
Sbjct: 7   IVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSRNSEKIRNLILNNK-STFNKET 65

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
           + +++ +AR +++E +IR  + + KI+L DRF DS+ AYQ
Sbjct: 66  DLLLYLSARSENME-IIRKNVGK-KIILIDRFSDSTIAYQ 103


>gi|21244732|ref|NP_644314.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306]
 gi|23821767|sp|Q8PFG7|KTHY_XANAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21110424|gb|AAM38850.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 227

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L      V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLAATLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG    +  L LD L E
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF   A 
Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             P + H+VD++    SV      I+   +  R+S  ++  D
Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212


>gi|289666405|ref|ZP_06487986.1| thymidylate kinase [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289669267|ref|ZP_06490342.1| thymidylate kinase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 227

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARCLATTLETAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG    +  L LD L E
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF  +  
Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIFAGL-- 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             P + H+VD++    SV      I+   +  R+S  ++  D
Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHAD 212


>gi|115377200|ref|ZP_01464412.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|310821205|ref|YP_003953563.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|115365783|gb|EAU64806.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|309394277|gb|ADO71736.1| Thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 220

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCG 58
           G FI  EG++GAG TT    L   L+ + + V  TREP   P     R  L     L  G
Sbjct: 11  GRFIVLEGLDGAGTTTQAERLAAALRAEGHAVLTTREPSDGPIGTMIRQALTGRLVLPQG 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 E  A+++AA R DH++  + PAL  G I+L DR++ SS AYQG       L + 
Sbjct: 71  AGPLAPETLALLYAADRTDHLKAKVLPALEAGHIVLSDRYVLSSLAYQG-----AALAMA 125

Query: 119 SLQEISVQEVMPDCTIIL 136
            ++ ++   V PD T+ +
Sbjct: 126 WVEAVNGHAVSPDLTLFV 143


>gi|269986146|gb|EEZ92459.1| dTMP kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 200

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 23/184 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCG 58
           G FI  EGI+ AGK T   LL   ++ K + V +T+EP     GG   A   + + LS  
Sbjct: 3   GKFIVIEGIDNAGKGTQSVLLAEHIRSKGFKVILTKEPTNGILGGISKAALNKELNLS-- 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 +A  ++F A R  H+E  I PA+ +G I++CDR+  S+ AY      + ++   
Sbjct: 61  -----NKALQLLFCADRAHHLETEIEPAMRDGFIVICDRYFFSTLAY----GFASNINYK 111

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+ ++V    PD  I LDL     L R +     ++   L  F+  + +   K RQ +L
Sbjct: 112 WLRSVNVSFRKPDLGIYLDLDPKTSLSRAK-----KQVDGLQLFDNLEKI--SKVRQAYL 164

Query: 179 DIAR 182
            IA+
Sbjct: 165 SIAK 168


>gi|166713902|ref|ZP_02245109.1| thymidylate kinase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 227

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+       +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLEAAGARFVLSKEPTNGPWGTKLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG    +  L LD L E
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF  +  
Sbjct: 121 LNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIFAGL-- 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             P + H+VD++    SV      I+   +  R+S   +  D
Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGATAD 212


>gi|124486152|ref|YP_001030768.1| thymidylate kinase [Methanocorpusculum labreanum Z]
 gi|166221753|sp|A2ST45|KTHY_METLZ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|124363693|gb|ABN07501.1| thymidylate kinase [Methanocorpusculum labreanum Z]
          Length = 198

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 20/200 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGK+T    LK  LQ  + +   T+EPG +P   +A    +    D F  
Sbjct: 1   MLITLEGIDGAGKSTLYEGLKTRLQ--DLEPVFTKEPG-SPLVNSAVRREIGANRDPF-- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AEA +F A    H+  V+ PAL E K+++ DR+ DS +AYQ  + S   +  D    ++
Sbjct: 56  -AEATLFVADHAAHLAQVVLPALEEKKLVISDRYSDSRFAYQ--QVSLIGIVPDPKAWLT 112

Query: 125 V----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  V PD TI+L +  +  + R      L E    ++FE  D    E+ ++ +L+ 
Sbjct: 113 AVHAGWSVRPDLTILLLISPETAMNR------LHERPGKEHFE--DPAFLEEVQKKYLER 164

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
               P+R  ++D+A   +++
Sbjct: 165 VTEDPERFLLIDAAQEPETI 184


>gi|157165350|ref|YP_001466858.1| thymidylate kinase [Campylobacter concisus 13826]
 gi|166221732|sp|A7ZDK0|KTHY_CAMC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|112801334|gb|EAT98678.1| thymidylate kinase [Campylobacter concisus 13826]
          Length = 195

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 17/188 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+G GK+T I +    L  K  D  VT+EPGGT      R +LL   + + G 
Sbjct: 1   MYVLFEGIDGVGKSTQIEI----LASKFSDAIVTKEPGGTQLGVNLREILLRSSI-KIGK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS--QHLFLDSLQE 122
            AE ++F A R +H E ++ P L  GK++L DR   S  AY    D +  +++ L+ L +
Sbjct: 56  RAEILLFLADRAEHFEKLVAPNL--GKLILSDRGFISGIAYALANDENLDENVLLE-LNK 112

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER-----KDVMIHEKRRQ 175
            ++ +   D  I  +   ++   R++ R +    E+  L+Y  +     K ++I      
Sbjct: 113 FALNDKFADKIIFFEASRELISSRLKARGTSDKIEARGLEYLLKVQSLMKQILIKNGFET 172

Query: 176 IFLDIARN 183
           +F+D +++
Sbjct: 173 LFIDASKS 180


>gi|237752726|ref|ZP_04583206.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376215|gb|EEO26306.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430]
          Length = 193

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 11/134 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L+I+ EGI+ AGK+T ++ LK   +    D   T EPG TP  +  R +LL+  +     
Sbjct: 6   LYIALEGIDTAGKSTQVARLKEVFK----DAVFTFEPGATPLGKHIREILLNTEI--VSP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R +H  +VI P L   K++L DR L S  AY  + D      L+S     
Sbjct: 60  KAEMLLFLADRAEHFASVIAPNL--DKLILSDRSLISGIAYARDFDME---MLESFNAFV 114

Query: 125 VQEVMPDCTIILDL 138
           ++ ++P+  I+L+L
Sbjct: 115 LENILPNKAILLEL 128


>gi|296242887|ref|YP_003650374.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
 gi|296095471|gb|ADG91422.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
          Length = 203

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G FI  EGI+GAGKTT   +L    + K  D   T EP  +   +A +    S   D 
Sbjct: 5   NRGFFIVLEGIDGAGKTTLAKMLIDKFKSKGLDAIYTYEPTDSLIVKAVKGDY-SPYRD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  +A+ FA  RL HV+ +I P L +G  ++ DR+  SS AYQ    S+     + + 
Sbjct: 63  --AYIDALAFALDRLIHVKKLILPMLGKGVTVISDRYFYSSIAYQ----SAMGAPYEWVA 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
           E++   + PD  I LD+P ++ + R
Sbjct: 117 EVNKYALRPDLAIYLDIPPEVAIDR 141


>gi|289192999|ref|YP_003458940.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
 gi|288939449|gb|ADC70204.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
          Length = 185

 Score = 72.0 bits (175), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 25/202 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT   LL   L     +   T EP  +      R +L   G  +   
Sbjct: 1   MFIVFEGIDGSGKTTQSKLLAEKL-----NAFWTYEPSDSEIGRFIREIL--SGNVKVDN 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  A++FAA R++H + +I+  L + + ++CDR+L SS AYQ      ++ F+ S+   +
Sbjct: 54  KTLALLFAADRVEHTK-LIKEEL-KKRAVVCDRYLYSSIAYQSVAGVDEN-FIKSINRYA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   PD   +L + ++  LKRV+ +         D FE+KD +  EK +  +L++A  +
Sbjct: 111 LE---PDIVFLLVVDIETALKRVKTK---------DIFEKKDFL--EKVQNKYLELAE-E 155

Query: 185 PDRCHIVDSAHSFQSVATNILN 206
            +   I  +  S + V   ILN
Sbjct: 156 YNFIVIDTTKKSVKVVHEEILN 177


>gi|241889738|ref|ZP_04777036.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
 gi|241863360|gb|EER67744.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
          Length = 202

 Score = 71.6 bits (174), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 12/200 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I FEG++G+GKTT I+LL+ + +R    VH TR+P      +      L  G+ 
Sbjct: 1   MKKGLLIVFEGLDGSGKTTQINLLEEWFKRNKKLVHSTRQPTDFYRNDKRVKDYLEDGIV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                + A++ AA R    E  I+P L +G  ++ DR+L SS A+   R          +
Sbjct: 61  P-NMYSIALLAAADRTYQNEVEIKPTLSKGINIISDRYLYSSLAFFKARGIKYQ----EI 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+     PD  I LD+  D  L+RV+    +R+   L + E+ D    + R   FL++
Sbjct: 116 RNINKDIEEPDIIIFLDIDPDKALERVR----VRDGKNLRFEEKNDNTFIQVRNN-FLEV 170

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
                 +  IVDS    + +
Sbjct: 171 L--PKGKTLIVDSTKDVKLI 188


>gi|254455554|ref|ZP_05068983.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082556|gb|EDZ59982.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 204

 Score = 71.6 bits (174), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 11/188 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEGIEG+GK+ HIS++ ++L +K  +    REPGG P +E  R ++L+   D F    
Sbjct: 7   IVFEGIEGSGKSHHISIVSKYLDKKKINYIKIREPGGNPNSEKIRKLILNNKSD-FNKNT 65

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           + +++ AAR ++++        + KI+L DRF DS+ AYQ          ++ + +  + 
Sbjct: 66  DLLLYLAARSENIK--TIKKYYKKKIILIDRFTDSTIAYQHYGMGIDIKIINLIHKFLLD 123

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +    T        + L   +N Y  L++   L+ +++ ++  + K +  FL +A  + 
Sbjct: 124 NISVSFTF-------LNLVNKKNLYLRLKKRKKLNRYDKFNMNFYNKVQNGFLKLANLKK 176

Query: 186 DRCHIVDS 193
           +  H+V+S
Sbjct: 177 NSYHLVNS 184


>gi|326792104|ref|YP_004309925.1| thymidylate kinase [Clostridium lentocellum DSM 5427]
 gi|326542868|gb|ADZ84727.1| thymidylate kinase [Clostridium lentocellum DSM 5427]
          Length = 203

 Score = 71.6 bits (174), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F +F+G  G GK+T I+ +   LQ +  +V  T EP      +  R +      +    E
Sbjct: 4   FFAFDGPNGVGKSTLINEVSNMLQERGIEVLNTSEPSTLEIGKFTRRI-----SEYVRKE 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A + AA R +H+  VI+PAL E +I+LCDR++ SS   QG     +   L+    +  
Sbjct: 59  TLACLVAADRYEHINKVIQPALDEKRIVLCDRYIASSLVLQGIDGVDEQFILNLCNNM-- 116

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSL----RESAC----LDYFERKDVMIHEKRRQIF 177
             ++PD   IL        KR++ R +L    RES      ++YF+    ++     +++
Sbjct: 117 --ILPDIYFILIASPYTIRKRLKERENLTRFERESKIEYLEVEYFKNAVTILENMGIEVY 174

Query: 178 LDIARNQPDRC 188
                N P+ C
Sbjct: 175 EINTDNSPENC 185


>gi|21233354|ref|NP_639271.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66770317|ref|YP_245079.1| thymidylate kinase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188993513|ref|YP_001905523.1| thymidylate kinase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|23821764|sp|Q8P3Y6|KTHY_XANCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|81303736|sp|Q4UPG4|KTHY_XANC8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621847|sp|B0RXV1|KTHY_XANCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21115188|gb|AAM43153.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66575649|gb|AAY51059.1| thymidylate kinase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167735273|emb|CAP53487.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 227

 Score = 71.6 bits (174), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 21/200 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L++    V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARSLATLLEQAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E  +    R +HVE +I PAL  G+I++ DR+  S  AYQG    +  L LD+L  
Sbjct: 65  SAQDEVDLLLRDRREHVEALIAPALARGEIVILDRYFPSMVAYQG----AAGLPLDAL-- 118

Query: 123 ISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  +  P  D  ++LDLP   GL R++ R         ++FE +D +  E+ R IF   
Sbjct: 119 LAANDFAPRPDLLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRAIF--A 169

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
           A   P + H++D++    SV
Sbjct: 170 ALQLPGK-HVIDASADADSV 188


>gi|322368399|ref|ZP_08042968.1| thymidylate kinase [Haladaptatus paucihalophilus DX253]
 gi|320552415|gb|EFW94060.1| thymidylate kinase [Haladaptatus paucihalophilus DX253]
          Length = 197

 Score = 71.2 bits (173), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 36/214 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT    +   L  +  D   TREP  +   EA   V  S   D+  +
Sbjct: 1   MLLTLEGLDGSGKTT----VWEVLHEEFPDAVFTREPTDSWYGEA---VNRSIEDDDADS 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A    H+ + +RPAL EGK+++ DR+ DS YAYQ        + LD +    
Sbjct: 54  VAELFLYTADHAAHLADTVRPALEEGKLVISDRYSDSRYAYQA-------VALDGVVSRP 106

Query: 125 VQEVM---------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH-EKRR 174
           ++ ++         PDCTI LD+  + G  R         S   + FE+   +   +   
Sbjct: 107 MEYIIGVHKPWTRPPDCTIYLDVDPETGAAR---------SGATNKFEQAGFLAQVQSNY 157

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +  +D    +P R   VD+  S + V  ++++ +
Sbjct: 158 ERLMDA---EPGRFVRVDATQSPEDVIESVVSTI 188


>gi|166366993|ref|YP_001659266.1| thymidylate kinase [Microcystis aeruginosa NIES-843]
 gi|166089366|dbj|BAG04074.1| thymidylate kinase [Microcystis aeruginosa NIES-843]
          Length = 207

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 22/216 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----D 60
           FI FEGI+G+G +T   LL+ +  ++     ++ EP         R ++ +  +     +
Sbjct: 5   FIVFEGIDGSGTSTQAKLLQEYFLKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIKDQN 64

Query: 61  EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +F  +  A +FAA R DH+ N    V +    E   ++  R+  SS AY           
Sbjct: 65  QFDRQM-AYLFAADRHDHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNCNNPEE---- 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L  +++++     PD  I +D+  DI L R++NR      A  + +E+++ ++  K RQ+
Sbjct: 120 LAFVRQLNQHFPNPDIVIYIDVLPDISLARIKNR------AITEVYEKQEKLM--KVRQM 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F+ I +   D C  +D + + +++  NI+N +  L+
Sbjct: 172 FIQIFKEYKDNCLQLDGSDTIENLHRNIINYLERLI 207


>gi|289582282|ref|YP_003480748.1| thymidylate kinase [Natrialba magadii ATCC 43099]
 gi|289531835|gb|ADD06186.1| thymidylate kinase [Natrialba magadii ATCC 43099]
          Length = 199

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 21/207 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++ EG++G+GKTT    +   LQ    D   TREP  T  +     V  S   D+  + 
Sbjct: 4   LVTLEGLDGSGKTT----VWEALQDTYPDAVFTREP--TNDSWYGDAVYRSIEDDDADSL 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124
           AE  ++ A   DH+   I PAL  G +++ DR+ DS YAYQG   +      + L+  + 
Sbjct: 58  AELFLYTADHADHLSRKIEPALERGDLVISDRYADSRYAYQGATLAETGRIAEPLEYVVD 117

Query: 125 VQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           V E   + PD TI LDL  +   +R  +      +A L           E  R+ +  +A
Sbjct: 118 VHEPFSIEPDLTIYLDLDPETAARRAGSTNKFEHAAYL-----------ESVRENYDLLA 166

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
               DR   VD+  S +SV   + +++
Sbjct: 167 ERYADRFVRVDATQSPESVLETVRSVL 193


>gi|55379836|ref|YP_137686.1| thymidylate kinase [Haloarcula marismortui ATCC 43049]
 gi|59798125|sp|Q5UXM3|KTHY_HALMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|55232561|gb|AAV47980.1| thymidylate kinase [Haloarcula marismortui ATCC 43049]
          Length = 195

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 16/170 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT    L+      +  V  TREP  T   +A   V  S   D+  +
Sbjct: 1   MLVTLEGLDGSGKTTVWERLRSDDAVPSETV-FTREPTDTWYGDA---VQRSIDNDDADS 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A    H+   +RPAL EG++++ DR+ DS YAYQG   +    F D L    
Sbjct: 57  LAELFLYTADHAAHLSETVRPALNEGRLVVSDRYSDSRYAYQGATLAGSGTFDDPLS--Y 114

Query: 125 VQEV------MPDCTIILDLPVDIGLKR--VQNRYSLRE--SACLDYFER 164
           V+EV       PD T+ LDL  +   +R    N++   E  +   D +ER
Sbjct: 115 VREVHAPWTRPPDRTVYLDLDPETAARRSGATNKFETAEYLTTVRDNYER 164


>gi|326392432|ref|ZP_08213833.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
 gi|325991527|gb|EGD50118.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
          Length = 92

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 27  FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPA 86
           +L ++ Y++ V REPGGT   E  R +LL    +      E +++A++R   VE  I PA
Sbjct: 2   YLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFISPVTETLLYASSRAQLVEEKILPA 60

Query: 87  LMEGKILLCDRFLDSSYAYQG 107
           L +G+I++ DRF+DSSY YQG
Sbjct: 61  LEKGQIVILDRFVDSSYVYQG 81


>gi|325914525|ref|ZP_08176869.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539295|gb|EGD10947.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937]
          Length = 226

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 17/215 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V  ++EP         R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARNLATTLEAAGARVKSSKEPTNGHWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HVE +I PAL  G+I++ DR+  S  AYQG    +  L LD+L E
Sbjct: 65  SADEEAELLIRDRHEHVETLIAPALARGEIVILDRYFPSMVAYQG----AAGLPLDALLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF   A 
Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRAIF--NAL 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             P +  ++D++    SV    L IV   + +R+S
Sbjct: 172 QLPGK-QVLDASADADSVLRQALTIVIAALAERLS 205


>gi|300710360|ref|YP_003736174.1| thymidylate kinase [Halalkalicoccus jeotgali B3]
 gi|299124043|gb|ADJ14382.1| thymidylate kinase [Halalkalicoccus jeotgali B3]
          Length = 192

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 26/213 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GK+T    +   LQ    D   TREP  +   EA    +     D    
Sbjct: 1   MLLTLEGLDGSGKST----VHEALQDTYPDAVFTREPTDSWYGEAVARSISDAEADPL-- 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            AE  ++ A   DH+  V+RPAL  GK+++ DR+ DS YAYQG   ++    +D   E  
Sbjct: 55  -AELFLYTADHADHLSRVVRPALDAGKLVISDRYSDSRYAYQG---AALAGAIDRPMEYV 110

Query: 124 ----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               S     PD TI LD+  + G +R         S   + FE+ + +   + R  +  
Sbjct: 111 RGVHSPFTRSPDLTIYLDVDPETGARR---------SGASNKFEQSEYL--GRVRANYER 159

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +   +P R   +D+  S ++V   +  ++ E++
Sbjct: 160 LIDAEPGRFVRIDATRSPETVLDRVEGVLSEVL 192


>gi|110669030|ref|YP_658841.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790]
 gi|109626777|emb|CAJ53245.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790]
          Length = 213

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 25/217 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+ EG++G+GK+T    L+  L     +V  TREP  +   +     +     D     
Sbjct: 14  LITLEGLDGSGKSTVCESLQSALP----EVTFTREPTDSWYGDLVTESMHDDSADSL--- 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQEI 123
           AE  +F A    H+  VIRP+L  G  ++ DR+ DS +AYQ     DS     L+ +Q  
Sbjct: 67  AELFLFTADHAAHLNRVIRPSLASGTAVISDRYADSRFAYQAAALADSRIDAPLEYIQ-- 124

Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S+ E     PD T+ LD+  + G+ R         +   + FER  V   E+    +  +
Sbjct: 125 SIHEPFSRRPDATVYLDIDPETGVTR---------AGATNKFER--VQYLERVATQYERV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              +P R + VD++ S   V   +  IV  ++   VS
Sbjct: 174 IAAEPTRFYRVDASQSIADVKKRVKTIVGTMLGDEVS 210


>gi|254168531|ref|ZP_04875375.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|197622586|gb|EDY35157.1| thymidylate kinase [Aciduliprofundum boonei T469]
          Length = 197

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 19/208 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GK+T    +   L    + + +T EP  T   +  R  +     +E   
Sbjct: 1   MFIVFEGIDGSGKSTIAKRIAEHLSSLGHKIFLTEEPTTTWMGKDVRRAI----EEEKNP 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            ++A++F A R +HVE  I+  L +GKI++ DR++ S++AYQG +         +L+ + 
Sbjct: 57  LSQALLFFADRAEHVE-AIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115

Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            V E M   PD  I+L +    GL  V  R   +E      FER++ +  E+ + I++ +
Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR-DFKEK-----FEREEFL--ERVQDIYMAL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A        +VDS  +   V  ++  I+
Sbjct: 168 ADKYG--FFVVDSNRNLNEVYDDVRKII 193


>gi|325971230|ref|YP_004247421.1| thymidylate kinase [Spirochaeta sp. Buddy]
 gi|324026468|gb|ADY13227.1| Thymidylate kinase [Spirochaeta sp. Buddy]
          Length = 203

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 20/178 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEG++GAG TT + LL     R +     T EP   P     R VL    +      
Sbjct: 8   FIVFEGLDGAGTTTQMQLLAEACDRADTPCRATFEPTDKPIGRLVRSVLQKQILT--TPL 65

Query: 66  AEAIVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121
           A A+++AA R DH+ N +      L  GK+++ DR+L SS +YQG E D  +   + SL 
Sbjct: 66  ALAMLYAADREDHLNNPVYGIIHDLEAGKLVISDRYLYSSLSYQGVECDFEK---IASLN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRRQIF 177
           E       P     +D PVD  L+R+ +R        ++ FE+K+ +  + E   +IF
Sbjct: 123 EFP----SPQYVFFIDTPVDECLRRINSR-----GNEVELFEKKEFLHKVKENYERIF 171


>gi|262199023|ref|YP_003270232.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
 gi|262082370|gb|ACY18339.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
          Length = 210

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 33/216 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--GVDE 61
           GL I  EGI+G+G +T   LL      +    H T EP   P     R +L      VD+
Sbjct: 6   GLLIVLEGIDGSGTSTQTRLLCDAFAARGRSTHATHEPSTGPVGLLLREMLAGAHAPVDQ 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 ++++AA R DHV+  + PAL  GK+++ DR+  SS AYQG   +      D + 
Sbjct: 66  ---TTLSLLYAADRADHVQREVEPALAAGKLVVSDRWYHSSLAYQGAGGTR-----DWVA 117

Query: 122 EISVQEVMPDCTIILDLPV---------DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            ++     PD TI L++           D   + + +R  +++    DY E         
Sbjct: 118 ALNRYARAPDLTIFLEVAAEIAARRRADDGRSEEIFDRLEIQQRVAADYRE--------- 168

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                +D  R + +R  ++D      +V+ +I+ +V
Sbjct: 169 ----VIDSLRGR-ERIEVLDGERPLAAVSADIVRLV 199


>gi|268679911|ref|YP_003304342.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617942|gb|ACZ12307.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946]
          Length = 194

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 20/204 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEG++ +GK+T +SL  +    ++  VH T+EPGGTP     R +LL  G  +   
Sbjct: 1   MYVIFEGVDTSGKSTQVSLFAK----RHPHVHATKEPGGTPTGSKLREMLLG-GELKGSF 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123
            AE  +F A R  H + V++P L   KI++ DR   S  AY     S     FL  +  +
Sbjct: 56  NAELFLFLADRAFHYDTVVKP-LRHEKIVMSDRGFLSGIAYACANHSDIDGTFLLQMNRL 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIFLDI 180
           +++E  P+  ++           V N + ++E   +   D  E + V    + + I   +
Sbjct: 115 ALEEDYPEKMVLF----------VSNEHLIKERLGMKEHDAIEERGVSYLLQIQDIMRRV 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
           A+  P +   VD+A   +++   I
Sbjct: 165 AKTLPIKVLEVDAAQDIETLYRQI 188


>gi|322378354|ref|ZP_08052810.1| thymidylate kinase [Helicobacter suis HS1]
 gi|322380924|ref|ZP_08054995.1| thymidylate kinase [Helicobacter suis HS5]
 gi|321146647|gb|EFX41476.1| thymidylate kinase [Helicobacter suis HS5]
 gi|321149211|gb|EFX43655.1| thymidylate kinase [Helicobacter suis HS1]
          Length = 206

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+ +GK+T I+LLK+      +    T+EPGGTP  +A R  +L     +  +
Sbjct: 8   MFIAIEGIDTSGKSTQINLLKQTFPNALF----TKEPGGTPLGQALREKILD---HKLSS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123
            A+ ++F A R  H+E VI+P     +++  DR L S  AY              LQE I
Sbjct: 61  HAQFLLFLADRSLHIEEVIKPN--SHRLIFSDRSLISGLAYAPCL----------LQEAI 108

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + ++     +I DL   + L   + +  L +   +D  E + V   E  ++  L+  + 
Sbjct: 109 DLHKIHGLLEVIPDLVFVLKLDHTELKKRLDKKTSMDCIEAQGVAFLEHTQKRLLEACQI 168

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +I+D++ S  S+  +IL  +  L+
Sbjct: 169 LKLKTYILDASKSPSSIHQSILEKLESLL 197


>gi|153004942|ref|YP_001379267.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152028515|gb|ABS26283.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 214

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/148 (39%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----SCG 58
           G FI  EG++GAG TT   LL   L+     VHVT EP G P     R VL        G
Sbjct: 9   GRFIVLEGLDGAGTTTQARLLGDRLRASGRSVHVTAEPSGGPVGSLVRQVLSRRVVGGRG 68

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             E  A A A++FAA RLDHV   I P L  G  ++ DRF  SS AYQG         L 
Sbjct: 69  EGELDAGALALLFAADRLDHVAAEIAPKLAGGVDVVSDRFTLSSLAYQGLTTGD----LP 124

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            ++ I+ +   PD T+ L     + LKR
Sbjct: 125 WVEAINGRAATPDVTLFLRARPSVALKR 152


>gi|145299023|ref|YP_001141864.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851795|gb|ABO90116.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 206

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 7/162 (4%)

Query: 43  GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102
           G P AE  R ++     +    EAE ++  A+R+  VE  I+PAL EG+ ++ DR   SS
Sbjct: 35  GNPLAERMRAIVKEVHDERLTIEAELLLMYASRVQLVETRIKPALAEGRWVVGDRHDLSS 94

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            AYQG         + ++++  + +  PD T+ LD+   +GL+R ++R        LD  
Sbjct: 95  QAYQGGGRGIDAGLIGAIKQAVLGDFKPDFTLYLDIDPALGLQRARHR------GELDRI 148

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           E + +   E+ R  +L++A  + D   ++D+  +   V T I
Sbjct: 149 ELEQLSFFERTRSRYLELA-AKDDSIRVIDAGQTPDQVKTAI 189


>gi|320100889|ref|YP_004176481.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
 gi|319753241|gb|ADV64999.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
          Length = 204

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG++GAGKTT    L   L+ + +    T EP  +   +A +    S   D 
Sbjct: 3   GKGYFIVLEGLDGAGKTTVAHRLVEELESRGFPAIYTYEPTDSEIVKAVK----SIYSDL 58

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  +A+ FA  RL HV+++++P + +G  ++ DR+  SS AYQ    S+     D + 
Sbjct: 59  RDAYIDALAFALDRLIHVKSLVKPFIEKGVTVVSDRYFYSSVAYQ----SASGAPFDWIL 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
           E++   + PD  I LD+  + GL R
Sbjct: 115 EVNKYALKPDVAIYLDVDPEEGLSR 139


>gi|150400777|ref|YP_001324543.1| dTMP kinase [Methanococcus aeolicus Nankai-3]
 gi|166221752|sp|A6UTV9|KTHY_META3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|150013480|gb|ABR55931.1| dTMP kinase [Methanococcus aeolicus Nankai-3]
          Length = 196

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 20/163 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G+GKTT   LL  +L         T EP      +  R VL   G      E
Sbjct: 4   FIVFEGIDGSGKTTQAKLLADYLNG-----IYTCEPTNGEIGQLIRKVL---GGKNCEKE 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + A++FA  R++H++  I   L+E  +++CDR++ SS  YQ    S Q + +D +  I+ 
Sbjct: 56  SLALLFAGDRVEHIKE-IEHKLIEN-MVICDRYVYSSMVYQ----SIQGIDIDFIASINR 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
              +PD  I LD+ ++  LKR+ +R S       + FE K+++
Sbjct: 110 FAKIPDVLIYLDVSIEESLKRMGDRDS------KEIFENKEIL 146


>gi|292656335|ref|YP_003536232.1| thymidylate kinase [Haloferax volcanii DS2]
 gi|291370107|gb|ADE02334.1| thymidylate kinase [Haloferax volcanii DS2]
          Length = 197

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 13/196 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63
           + ++ EG++G+GKTT    +   L     D   TREP   +   EA    +   G D   
Sbjct: 1   MLVTLEGLDGSGKTT----VWEALHDAYPDAVFTREPTSDSWYGEAVNRAIDDDGADPL- 55

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQ 121
             A   +F A   DH+  V+RPAL +GK+++ DR+ DS YAYQ    RDS     ++ ++
Sbjct: 56  --ATLFLFTADHADHLSRVVRPALADGKLVVSDRYSDSRYAYQAAALRDSDLRRPMEYIR 113

Query: 122 EISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIH-EKRRQIFL 178
            I       PD TI LD+  +    R        ++A L D  E  + ++  E  R + +
Sbjct: 114 GIHTAFTRPPDKTIYLDVDPETAAARSGATNKFEQAAYLADVRENYERLVEAEPERFVRI 173

Query: 179 DIARNQPDRCHIVDSA 194
           D  ++  D    V++A
Sbjct: 174 DATQSPEDVLDAVEAA 189


>gi|39938830|ref|NP_950596.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|39721939|dbj|BAD04429.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 204

 Score = 68.9 bits (167), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 91/168 (54%), Gaps = 17/168 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKTT I  +++ L+++ ++V   +  G +   +  R + L+       A+
Sbjct: 3   LIVFEGLDGSGKTTLIQKIRKQLEKQGHEVITLQGLGSSSIGQPLRDIFLT------NAQ 56

Query: 66  AEAI---VFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120
            + +   + + A +  + E  I+P L   KI+L DR+L S++AYQ   R+  ++  L +L
Sbjct: 57  LKPLTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNYQLFNL 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYFER 164
             ++ Q + PD T+ L +   +GL+R QN    +  + E+  L YF +
Sbjct: 117 --LNKQFIKPDMTVYLKIKPQLGLERKQNQKDHKLDVIETHPLSYFRQ 162


>gi|302349154|ref|YP_003816792.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15]
 gi|302329566|gb|ADL19761.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15]
          Length = 214

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ++ EGI+G+G TTH  LL + L    Y    T+EP   P  +  R  LL+ G  E  
Sbjct: 3   GAIVALEGIDGSGITTHSKLLAQRLSSMGYRAIYTKEPTEGPVGQVIRQ-LLAQGRPE-- 59

Query: 64  AEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
               A++FAA R  H      +   +  AL +G +++ DR+  SS AYQG   +      
Sbjct: 60  PRLAALLFAADRSWHLCCDPSLPGGVMGALEQGYVVVMDRYKYSSIAYQGASGADPGW-- 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
             L E++      D  I +D+PV++ L RV  R   RE   ++ F R+
Sbjct: 118 --LWEVNSFAPEADLLIFIDVPVEVALSRVAERQR-REGYEVEGFLRR 162


>gi|8247943|sp|Q55593|KTHY_SYNY3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 212

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 17/219 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGV 59
           + LFI  EGI+G+GKTT   LL    QR+     ++ EP   P     R  L   L    
Sbjct: 2   AALFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYN 61

Query: 60  DEFGAEAE-AIVFAAAR---LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           D    EA+   +FAA R   L H  + +   L +   ++  R+  SS AY    ++    
Sbjct: 62  DARQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCHTEAD--- 118

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--HEKR 173
             + +Q ++     PD  I LDLPVD+ L+R+ +R  L + A  + +E+++ +I  H   
Sbjct: 119 -WEFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLISVHRNY 177

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +IF   A  Q   C + D++   + +   I+  V E++
Sbjct: 178 DRIF---AHYQGQLCRL-DASLPVEQLHQAIITKVEEML 212


>gi|257076424|ref|ZP_05570785.1| thymidylate kinase [Ferroplasma acidarmanus fer1]
          Length = 206

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 24/152 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G+GKTT ++ L++       ++H TREP  T   + A    LS   + F  
Sbjct: 1   MFITIEGIDGSGKTTLVNSLRKIFD----NIHFTREP--TDKFQLANLKTLSTPFNSF-- 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS---- 119
                +F   RL+H + +       G K ++CDR+L SS AY+G     + LF D     
Sbjct: 53  -YNFFLFTYDRLEHQDEI------NGFKNVICDRYLASSIAYEGP--MIEELFGDKKETV 103

Query: 120 --LQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
             + E+S    +PD  I LD  +D+ L+R++N
Sbjct: 104 LWMLEVSKMLKLPDMIIYLDAHLDVALERIRN 135


>gi|152990566|ref|YP_001356288.1| thymidylate kinase [Nitratiruptor sp. SB155-2]
 gi|151422427|dbj|BAF69931.1| thymidylate kinase [Nitratiruptor sp. SB155-2]
          Length = 191

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 15/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I  EGI+ AGK+T I  LK        D   T+EPG TP     R ++L        +
Sbjct: 1   MYILIEGIDRAGKSTQIEKLKTLFP----DALFTKEPGCTPLGNKIRDMVLHT--QNPSS 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI P L   K ++ DR   S  AY   +       L +L  I+
Sbjct: 55  LAELFLFLADRAEHIEKVILPNL--KKTIISDRGYISGIAYAAIKTELDLPTLRNLNAIA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++ V PD  + L+L  +   KR+       ++  LD  E++ +    + + I   + +++
Sbjct: 113 MKNVYPDKIVFLELSENELRKRM-------DALPLDSIEQRGIEYLMQVQSIMKKVIQSE 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P    I+D++   + +   IL  + E
Sbjct: 166 PIPSLILDASLDEEVIFQTILTFIKE 191


>gi|16331301|ref|NP_442029.1| hypothetical protein slr0379 [Synechocystis sp. PCC 6803]
 gi|1001473|dbj|BAA10099.1| slr0379 [Synechocystis sp. PCC 6803]
          Length = 236

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 17/219 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGV 59
           + LFI  EGI+G+GKTT   LL    QR+     ++ EP   P     R  L   L    
Sbjct: 26  AALFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYN 85

Query: 60  DEFGAEAE-AIVFAAAR---LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           D    EA+   +FAA R   L H  + +   L +   ++  R+  SS AY    ++    
Sbjct: 86  DARQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCHTEAD--- 142

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--HEKR 173
             + +Q ++     PD  I LDLPVD+ L+R+ +R  L + A  + +E+++ +I  H   
Sbjct: 143 -WEFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLISVHRNY 201

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +IF   A  Q   C + D++   + +   I+  V E++
Sbjct: 202 DRIF---AHYQGQLCRL-DASLPVEQLHQAIITKVEEML 236


>gi|154148244|ref|YP_001406485.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381]
 gi|166221733|sp|A7I1U4|KTHY_CAMHC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|153804253|gb|ABS51260.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381]
          Length = 195

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 8/148 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I FEGI+G GK+T I LLK  +  KNY   +T+EPGGT   E  R +LL     +   
Sbjct: 1   MLIFFEGIDGVGKSTQIELLKS-VYNKNY--LITKEPGGTLLGEKLREILLESDF-KISK 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEI 123
            AE  +F A R +H E V++ +  + K ++CDR   S  AY    + +  +  L +L +I
Sbjct: 57  TAELFLFLADRAEHFEKVLKFS--DKKDIICDRSFVSGIAYALANEQNLDINDLINLNKI 114

Query: 124 SVQEVMPDCT-IILDLPVDIGLKRVQNR 150
           ++   +P+   I L +  D    R++NR
Sbjct: 115 ALGGKIPNAKFIFLKISKDNLRFRLENR 142


>gi|78777324|ref|YP_393639.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251]
 gi|123550247|sp|Q30RH7|KTHY_SULDN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78497864|gb|ABB44404.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251]
          Length = 191

 Score = 68.6 bits (166), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I+     LQ    D  +T+EPGGT A +  R ++L+  +     
Sbjct: 1   MYIAIEGIDTAGKSTQIA----KLQEHFSDAIITKEPGGTEAGKEIREIVLNAKIK--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSLQ 121
           +AE ++F A R +H++ VI P L   K+++ DR + S  AY   QGE   +  L L+   
Sbjct: 55  KAEFLLFLADRAEHIQEVIEPNL--SKMIISDRSVVSGVAYALVQGEISETAILHLNRF- 111

Query: 122 EISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLD 179
             +   + P    +L L   ++ L+  Q +    E   ++Y  + +D +I        L+
Sbjct: 112 --ATGGIYPQKIFLLQLTNEELSLRLSQKKLDGIELRGIEYLLKIQDALIKASN---LLN 166

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILN 206
           I         ++D+  +  S+   ILN
Sbjct: 167 I------ELVLIDATKNIDSITQEILN 187


>gi|256810617|ref|YP_003127986.1| thymidylate kinase [Methanocaldococcus fervens AG86]
 gi|256793817|gb|ACV24486.1| thymidylate kinase [Methanocaldococcus fervens AG86]
          Length = 186

 Score = 68.2 bits (165), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 24/177 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT   LL   ++        T EP  +   +  R +L   G  +   
Sbjct: 1   MFIVFEGIDGSGKTTQSKLLAEKIK-----AFWTYEPSNSDVGKFIREIL--SGNIKVDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  A++FAA R++H + +      +   ++CDR+L SS AYQ      +  F++S+ + +
Sbjct: 54  KTLALLFAADRVEHTKLIKEKLKEKD--VVCDRYLYSSIAYQSVAGVDED-FINSINKYA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++   PD   +L + +++ LKRV+ +         D FE+KD ++  K +  +L++A
Sbjct: 111 LK---PDIVFLLIVDIEVALKRVKTK---------DIFEKKDFLM--KVQDKYLELA 153


>gi|320531334|ref|ZP_08032307.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136462|gb|EFW28437.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 109

 Score = 68.2 bits (165), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFISFEG +G GKTT I +L   L   + D  +TREPGGT      R +LL  G   
Sbjct: 26  GPGLFISFEGGDGVGKTTQIRILADLLAAADVDHILTREPGGTELGVEIRRLLLHGG--H 83

Query: 62  FGAEAEAIVFAAARLDHVENVIRPAL 87
               AEA+++AA R  H+   +RPAL
Sbjct: 84  VAPRAEALLYAADRAHHIATRVRPAL 109


>gi|194246795|ref|YP_002004434.1| Thymidylate kinase [Candidatus Phytoplasma mali]
 gi|193807152|emb|CAP18590.1| Thymidylate kinase [Candidatus Phytoplasma mali]
          Length = 205

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           L I FEGI+G GKTT I+ L + L+  + N  V +    G T    + R + L     + 
Sbjct: 2   LLIVFEGIDGTGKTTLINNLAQTLKTIQPNSKVIIINGLGSTNIGTSIREMFLFN--PKM 59

Query: 63  GAEAEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLD 118
            +E    + + A L  ++N +I+P L    I+L DR+L S++AYQ    + D    +F  
Sbjct: 60  ISETRYFL-SFANLIQIQNELIKPHLKTNTIILMDRYLGSNFAYQAYPFQIDPHYSIF-- 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             Q I  + + P  T+++DL   I LKR  +   L E+  L YF++       K  Q+F 
Sbjct: 117 --QLIQKKFLKPQITVLIDLEPKIALKRKGDLIDLIENQPLSYFQQV-----VKGYQLFF 169

Query: 179 D--IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  +  +   + + ++S    Q+V  N L+++  L
Sbjct: 170 NHYLKTDYKIKLNGLNSTLQHQTVIFNYLDLIKSL 204


>gi|39939174|ref|NP_950940.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|39722283|dbj|BAD04773.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 209

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 11/163 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT  I  +K  L+++  +V V R  G +   E+ R   L+   ++    
Sbjct: 3   LIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLTH--NKLHNL 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQEI 123
               +  A  +   E +I+P L   KI+L DR+L S++AY+    R   ++ F ++L ++
Sbjct: 61  TRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKYYFFNNLTKL 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYS----LRESACLDYF 162
            ++   P+ T+ L +    GL R  N+ +    + E++ L YF
Sbjct: 121 FIK---PNLTVYLKIDPQTGLNRKANQTNHTLDVIETSPLSYF 160


>gi|261885334|ref|ZP_06009373.1| thymidylate kinase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 193

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++FEG++G GK+T ISLLK F      D  +T+EPGGT      R  LL     +   
Sbjct: 1   MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           + E  +F A R +H E V++P      ++L DR   S  AY    DSS
Sbjct: 56  KTEIFLFLADRAEHYEKVLKPNY--ANLVLNDRSFVSGMAYAMANDSS 101


>gi|118474238|ref|YP_892065.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40]
 gi|254808284|sp|A0RPD2|KTHY_CAMFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118413464|gb|ABK81884.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40]
          Length = 192

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++FEG++G GK+T ISLLK F      D  +T+EPGGT      R  LL     +   
Sbjct: 1   MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           + E  +F A R +H E V++P      ++L DR   S  AY    DSS
Sbjct: 56  KTEIFLFLADRAEHYEKVLKPNY--ANLVLNDRSFVSGMAYAMANDSS 101


>gi|58580054|ref|YP_199070.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84622050|ref|YP_449422.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188578974|ref|YP_001915903.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|73920833|sp|Q5H5T5|KTHY_XANOR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123523407|sp|Q2P8H9|KTHY_XANOM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621848|sp|B2SS96|KTHY_XANOP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58424648|gb|AAW73685.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365990|dbj|BAE67148.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188523426|gb|ACD61371.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 227

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLTTTLEAAGARVVLSKEPTNGPWGTKLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG    +  L LD L E
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++     PD  ++LDLP   GL R++ R         ++FE +D +  E+ R IF  +  
Sbjct: 121 LNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIFAGL-- 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             P + H+VD++    SV      I+   +  R+S   +  D
Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGAPAD 212


>gi|307353971|ref|YP_003895022.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
 gi|307157204|gb|ADN36584.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
          Length = 210

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 17/167 (10%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN+  GLFI+ +G  G GK+T +  L + L  + ++ + TREP  +   +  R       
Sbjct: 1   MNTSYGLFITLDGPNGVGKSTIMGDLCKKLTSQGFETYKTREPTDSLIGDFLRK-----S 55

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +++  +  A + A  R  H+E+ I PAL + KI+L DR+++SS   Q   D      L+
Sbjct: 56  EEKYRGKTLACIAATDRYYHIEHEILPALQKKKIVLSDRYVESSLVLQRIDDVD----LE 111

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            + EI+   ++PD ++IL    D     +  R +LR      +FERK
Sbjct: 112 FIWEINKNVIIPDLSVILLASPDT----LNKRLNLRSDGS--FFERK 152


>gi|85057562|ref|YP_456478.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789667|gb|ABC65399.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 209

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 11/163 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT  I  +K  L+++  +V V R  G +   E+ R   L+   ++    
Sbjct: 3   LIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLTH--NKLHNL 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQEI 123
               +  A  +   E +I+P L   KI+L DR+L S++AY+    R   ++ F ++L ++
Sbjct: 61  TRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKYYFFNNLTKL 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYS----LRESACLDYF 162
            ++   P+ T+ L +    GL R  N+ +    + E++ L YF
Sbjct: 121 FIK---PNLTVYLKIDPQTGLNRKANQTNHTLDVIETSPLSYF 160


>gi|290558929|gb|EFD92316.1| dTMP kinase [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 205

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 16/150 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSC 57
           +G FI  EGI+ AGK T  +LL + L+     V +T+EP     GG   A   + + +S 
Sbjct: 2   NGKFIVIEGIDNAGKGTQSTLLTQHLRENGLKVVLTKEPTNGILGGLSKAALNKEINIS- 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                   A  ++F A R  H+E  I P + +G  ++CDR+  S+ AY G      + +L
Sbjct: 61  ------GRALQLLFCADRAHHIETEIEPMMSKGLTVICDRYFFSTLAY-GFVSGINYKWL 113

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRV 147
            S   +++    PD  I LDL   + L R+
Sbjct: 114 RS---VNINFRKPDLGIYLDLDPKVSLSRM 140


>gi|261403129|ref|YP_003247353.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
 gi|261370122|gb|ACX72871.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
          Length = 187

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 24/180 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT    L      K+ +   T EP  +   E  R +L   G  +   
Sbjct: 1   MFIVFEGIDGSGKTTISKKLA-----KSINAFWTYEPSNSVVGELIRKIL--SGNVKVDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  A++F+A R++H + +     +  + ++CDR+L SS AYQ      +    D ++ I+
Sbjct: 54  KTLALLFSADRIEHNKKIKEE--LRYRDVVCDRYLYSSIAYQSVAGVDE----DFIRSIN 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   +L   ++  LKR+  +         D FE+K+ +  EK ++ +LD+A+ +
Sbjct: 108 RYALKPDLVFLLICDIETALKRINTK---------DIFEKKEFL--EKVQEKYLDLAKKE 156


>gi|154174807|ref|YP_001408262.1| thymidylate kinase [Campylobacter curvus 525.92]
 gi|254808283|sp|A7GYH0|KTHY_CAMC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|112802787|gb|EAU00131.1| thymidylate kinase [Campylobacter curvus 525.92]
          Length = 194

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 7/108 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEG++G GK+T I +    + R + D  VT+EPGGT   +  R +LL  G  +  A
Sbjct: 1   MYVLFEGVDGVGKSTQIEM----IARAHEDSLVTKEPGGTKIGQKLREILLG-GDFKLSA 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
            AE ++F A R +H + +I+P     +++L DR   S  AY    D+S
Sbjct: 56  RAEILLFLADRAEHYQKMIKPN--SSRLILSDRGFVSGVAYALANDAS 101


>gi|313682360|ref|YP_004060098.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994]
 gi|313155220|gb|ADR33898.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994]
          Length = 193

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I  L+        D  +T+EPGGT      R+++L   +     
Sbjct: 1   MYIAIEGIDTAGKSTQIEALRSLFP----DALITKEPGGTTVGTEIRNMVLHGNLKS--K 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H E+VI P +   K+++ DR   S  AY   ++      L  L  ++
Sbjct: 55  TAELLLFLADRAEHTESVILPNM--NKLIISDRSAVSGMAYASVQNLCDEPVLVMLNRLA 112

Query: 125 VQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYF 162
               +PD   IL L   ++  +  Q  + + ES   +Y 
Sbjct: 113 TGGTLPDTVFILKLTSEELSYRLSQKEHDVIESRGTEYL 151


>gi|85057461|ref|YP_456377.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789566|gb|ABC65298.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 210

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 13/166 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT+ I  +++ LQ++  +V V R  G +    + R   L+   +     
Sbjct: 3   LIIFEGLDGSGKTSLIKSVQQELQKQGNEVVVIRGLGSSTIGNSIRETFLTH--NNLHNL 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQE 122
               +  A  +   E  I+  L   KI+L DR+L S++AY+    + D + H+F      
Sbjct: 61  TRYFLSFANMIQTQEECIKHQLKTNKIILVDRWLGSNFAYRVYPSKIDKNYHIF----NN 116

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR----ESACLDYFER 164
           +S + + PD TI L +   +GL+R  N+ + +    E++ L YF++
Sbjct: 117 LSKKFIKPDITIYLKIHPQLGLERKINQKNHQLDVIETSSLTYFQQ 162


>gi|13541004|ref|NP_110692.1| thymidylate kinase [Thermoplasma volcanium GSS1]
 gi|23821802|sp|Q97CC8|KTHY_THEVO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|14324388|dbj|BAB59316.1| thymidylate kinase [Thermoplasma volcanium GSS1]
          Length = 190

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 29/170 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+GAGKTT    L   L+++ + V +TREP           V L         
Sbjct: 1   MFIAVEGIDGAGKTTLAKSLSSLLEKEGFRVFLTREPTDDIRNYEGDDVEL--------- 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--------GERDSSQHLF 116
               I F   R  H +  IR  L EG +++ DR++ SSYAY+        G  + ++  +
Sbjct: 52  ---FIKFTLDRYKH-QKEIRKKLNEGFVVISDRYIRSSYAYEMKGAAAALGSEEKAKE-W 106

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
           +D +  I    + PD  I++ + V +GL R+  R     +  + +FE+++
Sbjct: 107 MDCVSNIIT--IRPDINILVQVDVQVGLDRISKR-----NGTITHFEQRE 149


>gi|222480299|ref|YP_002566536.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239]
 gi|254808298|sp|B9LQ28|KTHY_HALLT RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|222453201|gb|ACM57466.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239]
          Length = 197

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 23/213 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EG++G+GKTT    L         D   TREP  +   EA   V  S   D+   
Sbjct: 1   MLITLEGLDGSGKTTVWEALHDVYP----DATFTREPTDSWYGEA---VDRSIAADDADP 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            AE  +  A   DH+   I PAL +G +++ DR+ DS +AYQ    ++  + +D   E  
Sbjct: 54  LAELFLLTADHADHLSGTIEPALADGDLVISDRYSDSRFAYQAATLAASDVDIDRPLEYI 113

Query: 124 ----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               +     PD TI LDL           R +   +   + FE+   +     R+ +  
Sbjct: 114 KGIHAAFSRPPDATIYLDL---------DAREAAERAGRTNKFEQDGYLA--AVRKNYER 162

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +   +PDR   +D++ S ++V   +  ++ EL+
Sbjct: 163 LIDAEPDRFVRIDASQSPEAVIARVEEVLSELL 195


>gi|291276513|ref|YP_003516285.1| putative thymidylate kinase [Helicobacter mustelae 12198]
 gi|290963707|emb|CBG39540.1| putative thymidylate kinase [Helicobacter mustelae 12198]
          Length = 193

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+ +GKTT I LLK       +    TREPGG+   E  R ++L    +    
Sbjct: 1   MYIVFEGIDTSGKTTQIELLKPLFPHAIF----TREPGGSRIGEKIRKMILEQ--EGLNP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122
            AE  +F A R  H+  VI P   +  +++ DR   S  AY      ++ LF ++  L  
Sbjct: 55  TAEFFLFLADRAQHISEVILPH--KKDLIIADRSFVSGIAY------AEDLFPEAYELNL 106

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFER 164
            ++Q ++PD  I+  +  +   KR++N+++ + E   +DY  R
Sbjct: 107 FAMQGLLPDKVIVFKIDQEDLCKRLKNKHNDVIEKRGMDYLLR 149


>gi|15920677|ref|NP_376346.1| thymidylate kinase [Sulfolobus tokodaii str. 7]
 gi|23821799|sp|Q975E6|KTHY1_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|15621460|dbj|BAB65455.1| 190aa long hypothetical thymidylate kinase [Sulfolobus tokodaii
           str. 7]
          Length = 190

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 32/185 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------VLLSCGV 59
           FISFEGI+GAGKTT    +   L++K Y+V +T+EP      E  +       VLL+   
Sbjct: 4   FISFEGIDGAGKTTLAKKVYEVLKKKGYNVILTQEPFTREITELIKKAGWNDPVLLT--- 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                    ++F+A R  H++ ++     + +I+L DR+  S+ AYQ        L LD 
Sbjct: 61  ---------LLFSADRAFHIKWIME---QKPEIVLMDRYFHSTIAYQS------VLGLDE 102

Query: 120 --LQEISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRES-ACLDYFERKDVMIHEKRR 174
             ++E++ +   PD   +LD+ V+  +KR++  ++++  E  A L+   +K + +  K  
Sbjct: 103 KWIEEVNSKFPKPDIVFLLDIKVNEAIKRIRKDDQFNFEEKIATLEAVRKKYLELARKYN 162

Query: 175 QIFLD 179
            I LD
Sbjct: 163 FIVLD 167


>gi|301386509|ref|ZP_07234927.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13]
 gi|302062080|ref|ZP_07253621.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40]
 gi|302134676|ref|ZP_07260666.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 138

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 6/114 (5%)

Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           D++YAYQG      H  + +L++    ++ PD T++ DLPV+IGL R   R        L
Sbjct: 27  DATYAYQGGGRGLSHERIAALEQFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 80

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           D FE++     +  R  +L+ A+ +P R  +VD+A S   V  ++  ++ EL++
Sbjct: 81  DRFEQEGRAFFDAVRSTYLNRAKAEPARYRLVDAAQSLADVQASLDKLLPELLE 134


>gi|76664864|emb|CAJ17870.1| thymidylate kinase [Candidatus Phytoplasma solani]
 gi|76664904|emb|CAJ17888.1| thymidylate kinase [Candidatus Phytoplasma solani]
          Length = 115

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEG++G GKTT I  LK++L+ ++  V + +  G +   +  R++ L+         
Sbjct: 5   FISFEGLDGGGKTTLIKQLKKYLKNQHKKVIICQGLGSSLIGKPIRNLFLNQ--SNLSPN 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
              ++     L   E +I P+L++G I+L DR+ DS++AYQ +
Sbjct: 63  TRFLLSLTNMLQTQEELIIPSLLKGYIVLIDRWYDSTFAYQSD 105


>gi|313125419|ref|YP_004035683.1| thymidylate kinase [Halogeometricum borinquense DSM 11551]
 gi|312291784|gb|ADQ66244.1| thymidylate kinase [Halogeometricum borinquense DSM 11551]
          Length = 199

 Score = 66.2 bits (160), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 10/146 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EG++G+GKTT    L         D   TREP  +   +A   V  S   ++  +
Sbjct: 1   MLITLEGLDGSGKTTAWEALHDVYP----DAVFTREPTESWYGDA---VYRSMSDEDADS 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQE 122
            AE  +F A   DH+  V+RPAL + K+++ DR+ DS +AYQ     D+     LD ++ 
Sbjct: 54  LAELFLFTADHADHLSRVVRPALADDKLVISDRYSDSRFAYQAATLEDADLRRPLDYIRG 113

Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRV 147
           I       PD TI LD+  +    R 
Sbjct: 114 IHAAFSRPPDATIFLDVDPETAAARA 139


>gi|197294394|ref|YP_001798935.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853721|emb|CAM11639.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 209

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 17/167 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG++G+GKTT I  +K  LQ +N +V   +  G +      R + L+   +    + 
Sbjct: 4   IIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLTH--ENLDNQT 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----QGERDSSQHLFLDSLQ 121
             ++  +  +   E  I P +   KI+L DR+L S++AY     Q +RD    +F +   
Sbjct: 62  RLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY--QIFYNLFN 119

Query: 122 EISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR--ESACLDYFER 164
                 + PD T+ L    +IG+  KR Q+ + L   ES+ + YF++
Sbjct: 120 RF----IKPDMTVYLKTNPEIGINRKRTQSNHKLDVIESSPISYFKK 162


>gi|197294444|ref|YP_001798985.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853771|emb|CAM11700.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 209

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 17/167 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG++G+GKTT I  +K  LQ +N +V   +  G +      R + L+   +    + 
Sbjct: 4   IIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLTH--ENLDNQT 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----QGERDSSQHLFLDSLQ 121
             ++  +  +   E  I P +   KI+L DR+L S++AY     Q +RD    +F +   
Sbjct: 62  RLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY--QIFYNLFN 119

Query: 122 EISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR--ESACLDYFER 164
                 + PD T+ L    +IG+  KR Q+ + L   ES+ + YF++
Sbjct: 120 RF----IKPDMTVYLKTNPEIGINRKRTQSNHKLDVIESSPISYFKK 162


>gi|272761235|gb|ACZ95829.1| thymidylate kinase [Jujube witches'-broom phytoplasma]
          Length = 217

 Score = 65.9 bits (159), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 13/150 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKTT I  +++ L+++  +V   +  G +   +  R + L+       A+
Sbjct: 6   LIVFEGLDGSGKTTLIQKIRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT------NAQ 59

Query: 66  AEAI---VFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120
            + +   + + A +  + E  I+P L   KI+L DR+L S++AYQ   R+  ++  L +L
Sbjct: 60  LKPLTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNYQLFNL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
             ++ Q + PD T+ L +   +GL+R QN+
Sbjct: 120 --LNKQFIKPDMTVYLKIKPQLGLERKQNQ 147


>gi|85057354|ref|YP_456270.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789459|gb|ABC65191.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 210

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 13/166 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT+ I  +++ LQ++  +V   R  G +    + R   L+   +     
Sbjct: 3   LIIFEGLDGSGKTSLIKSVQQELQKQGNEVVAIRGLGSSTIGNSIRETFLTH--NTLHNL 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQE 122
               +  A  + + E  I+P L   KI+L  R+L S++AY+    + D + H+F      
Sbjct: 61  TRYFLSFANMIQNQEESIKPHLQTNKIILVKRWLGSNFAYRVYPSKIDKNYHIF----NN 116

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR----ESACLDYFER 164
           +S + + P+ TI L +   +GL+R  N+ + +    E++ L YF++
Sbjct: 117 LSKKFIKPNITIYLKIHPQLGLERKINQKNHQLDVIETSSLTYFQQ 162


>gi|149193824|ref|ZP_01870922.1| thymidylate kinase [Caminibacter mediatlanticus TB-2]
 gi|149135777|gb|EDM24255.1| thymidylate kinase [Caminibacter mediatlanticus TB-2]
          Length = 193

 Score = 65.5 bits (158), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 12/134 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I LLK     K ++    +EPG T   +  R +LL+   ++   
Sbjct: 1   MYIAIEGIDTAGKSTQIELLK-----KEFNAIFIKEPGFTSFGKKIREILLN---EDISK 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A R + +E V++P +   K+++ DR + S  AY  E      L   +L + +
Sbjct: 53  KAELFLFLADRSETIEEVVKPNI--NKLIISDRSVISGIAYAMEFFDFDMLV--NLNKFA 108

Query: 125 VQEVMPDCTIILDL 138
              + P+  IIL L
Sbjct: 109 TDSIFPEFVIILKL 122


>gi|16081254|ref|NP_393560.1| thymidylate kinase [Thermoplasma acidophilum DSM 1728]
 gi|13629142|sp|Q9HLZ2|KTHY_THEAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|10639227|emb|CAC11229.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 193

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 22/153 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+GAGKTT    +   L  + Y V++T+EP  T   E         GV+ F  
Sbjct: 1   MFIAIEGIDGAGKTTLARGIGNMLLGEGYRVYMTKEP--TDGMEN----YAGDGVELF-- 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFL 117
               + F   R  H   + R  +  G+I++CDR++ SSYAYQ E              ++
Sbjct: 53  ----LKFTINRYAHQREIDRH-IKNGEIVICDRYIRSSYAYQFEGIAEFFGNSEKAWEWM 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           DS+ EI   ++ PD  I +D+  +  ++R+  R
Sbjct: 108 DSVSEII--KIRPDVQIYVDVDEETAMERISRR 138


>gi|284044447|ref|YP_003394787.1| thymidylate kinase [Conexibacter woesei DSM 14684]
 gi|283948668|gb|ADB51412.1| thymidylate kinase [Conexibacter woesei DSM 14684]
          Length = 210

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 15/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F+  EG++GAG TT    L   L+ R  + V +T+EP   P     R  +   G    
Sbjct: 6   GRFVVVEGLDGAGTTTQAERLAAMLRTRGGHAVELTKEPTNGPLGAVLRQAI--EGRVAL 63

Query: 63  GAEAEAIVFAAARLDHVENVIR---PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              A A+ FAA R DH+ N +     AL  G+ ++ DR++ SS AY      S+      
Sbjct: 64  DPVALALAFAADRADHLFNPVNGVVAALDAGRWVVSDRYVLSSLAYNRGGVVSREW---- 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E++ + + PD T+ +D+  +I L+R+  R S  E      F  ++ ++   R    L 
Sbjct: 120 VAELNARAIAPDLTVFVDVDPEICLERIGARSSADE-----LFHSREQLVAVDRNYRDLI 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            A +       VD + S  +V   I   V E
Sbjct: 175 AAGHVHGPLATVDGSGSIDAVHDAIWTAVGE 205


>gi|148264686|ref|YP_001231392.1| dTMP kinase [Geobacter uraniireducens Rf4]
 gi|146398186|gb|ABQ26819.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 227

 Score = 65.1 bits (157), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 17/149 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----RHVLLSCG 58
           G  ++ EG++G+GK+T + LLKR+L+ +   V  T         +A      RH+L    
Sbjct: 11  GKLVAVEGLDGSGKSTQLYLLKRWLELRGLKVFFTEWNSSVIVKKATSKGKKRHLLTPTT 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                    +++ AA   D  E  I P L  G ++LCDR+  +++A    R  S   +L 
Sbjct: 71  F--------SLIHAADFADRYERQILPLLKAGYLVLCDRYFYTAFARDAVRGCS-CTWLR 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147
           SL E + +   PD T+  D P+ + L R+
Sbjct: 122 SLYEFARR---PDLTLFFDTPLPVALSRI 147


>gi|325187412|emb|CCA21950.1| thymidylate kinase putative [Albugo laibachii Nc14]
          Length = 228

 Score = 65.1 bits (157), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 16/226 (7%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           MNS  G+FI  EG++  GKTT   LL   L + +    + R P  T          L+  
Sbjct: 1   MNSKRGVFILIEGLDCCGKTTQTKLLHEALTKMSSAAELLRFPDRTTPTGKLIDAYLTSK 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLF 116
            ++    A  ++F A R +  E  I   L  GK ++ DR     YAY G     S   + 
Sbjct: 61  DEQVNDRAIHLLFTANRWEAAEK-IEAILNSGKNIVMDR-----YAYSGAVFSASKSGMD 114

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++   +  +    PD  I LDLPVD   KR    Y       +++ E+  +  H   + I
Sbjct: 115 MNWCWQPEIGLPRPDAVIFLDLPVDSASKR--EDYGAERYENVEFQEKVRLNFH---KLI 169

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ-KRVSPLSS 221
            LD ++    R H +D+  + + V   +  +    +Q  + +PL+S
Sbjct: 170 ELDHSQKDESRWHFIDANDTIEKVQARVFEVAQRCIQVSQYTPLAS 215


>gi|312194212|ref|YP_004014273.1| hypothetical protein FraEuI1c_0317 [Frankia sp. EuI1c]
 gi|311225548|gb|ADP78403.1| protein of unknown function DUF894 DitE [Frankia sp. EuI1c]
          Length = 820

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
           ++GLF++ EG +   +   +  L+R+L     +V VT E P  T   EAA   +      
Sbjct: 560 HAGLFVAIEGADFRSRADQLESLRRWLLEAGREVLVTAESPADTSELEAALRTVQPDPAA 619

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  A++ AA   +HV  VI PAL  G ++L D ++D+  A Q     +    L  L
Sbjct: 620 GLHPRTTALLTAAIHAEHVARVIEPALARGAVVLTDSYVDAEIARQSAEACAALDELTIL 679

Query: 121 QEISVQEVMPDCTIILDL 138
              + + ++PD TI+LD+
Sbjct: 680 SHWATRSLVPDVTILLDV 697


>gi|284175009|ref|ZP_06388978.1| dTMP kinase [Sulfolobus solfataricus 98/2]
 gi|261602452|gb|ACX92055.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
          Length = 189

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 13/145 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I+ EGI+G+GKTT  +LLK +L+ K   +V VTRE    P +E    ++   G ++   
Sbjct: 4   LIAIEGIDGSGKTTLANLLKEYLESKMKLNVIVTRE----PFSEDIIKLIEKIGWND--P 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++FAA R  HV  + +  +    +++ DR+  SS AYQG     +      ++ ++
Sbjct: 58  ILLVLLFAADRALHVNWLSK--IRNADLIILDRYYFSSIAYQGALGVDEKW----IKTVN 111

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN 149
                PD  I+LDLP+++ + R++N
Sbjct: 112 SYFPKPDMVILLDLPIEVAISRIKN 136


>gi|218883455|ref|YP_002427837.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
 gi|218765071|gb|ACL10470.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
          Length = 206

 Score = 64.7 bits (156), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 8/143 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++GAGKTT    L   L  +      T EP  +   E  R V+ S   +   
Sbjct: 5   GCFIVLEGLDGAGKTTVARRLVEDLSSRGIPASYTYEPTDS---EIVR-VIKSTYNNLRD 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  +A+ FA  RL HV+N ++P L +G  ++ DR+  SS AYQ    S+     + + E+
Sbjct: 61  AYIDALAFALDRLIHVKNWVKPLLDKGVTVISDRYFYSSVAYQ----SASGAPFEWVIEV 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
           +   + PD  I LD+  + GL R
Sbjct: 117 NKFAMKPDVAIYLDIEPEEGLSR 139


>gi|171909511|ref|ZP_02924981.1| thymidylate kinase [Verrucomicrobium spinosum DSM 4136]
          Length = 218

 Score = 64.7 bits (156), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 13/221 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGKTT  + L ++   +     +++EP    + E  R +  S        
Sbjct: 1   MLIAIEGIDGAGKTTVSATLAQWCGERGLLCALSKEP---TSLEWGRKLRESAASGRLTL 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F   R  H E  I+PAL E  I++ DR+  S+ AYQG R ++    L +  E +
Sbjct: 58  AQELDLFHKDREQHSEGSIQPALDEDAIMVLDRYYWSTAAYQGARGANVDDVL-AFNETN 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                    + L +    G  R++ R     S     FE  DV    + R+IFL +    
Sbjct: 117 FPLPDLVLLLDLPVAT--GQDRIRVRGDQPNS-----FE--DVDALSRCREIFLQLPGRS 167

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
             RC IVD++  ++ V+   L +  +  Q+++   +S + +
Sbjct: 168 QARCVIVDASRPWREVSKECLALFKQAAQQKLWKTASPRSL 208


>gi|223985441|ref|ZP_03635501.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM
           12042]
 gi|223962584|gb|EEF67036.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM
           12042]
          Length = 143

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 12/151 (7%)

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQEISV 125
           +++AAAR  H+   + PAL  GK+++CDRF+DSS AYQG     ++L ++   S+ E ++
Sbjct: 1   MLYAAARRQHLIEKVLPALEAGKVVICDRFVDSSLAYQG---FGRNLGIEEVLSINEFAI 57

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           +   PD T+ LDL    GL R+  R +       D  +++ +  H +  + +  +     
Sbjct: 58  EGHWPDKTLYLDLAPQQGLDRIATRQN------KDRLDQEKIDFHLRVCEGYRQVRDRFA 111

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +R  ++D+A     V  + +  +  L+ + V
Sbjct: 112 ERMIVIDAAQPVDQVIADCVKAIGALIHREV 142


>gi|296273496|ref|YP_003656127.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299]
 gi|296097670|gb|ADG93620.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299]
          Length = 188

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+ AGK+T + +L     +K  +   T+EPG T      R + L+   +    
Sbjct: 1   MYVVIEGIDTAGKSTQLEIL----SKKFSNAIFTKEPGATKLGSKLREMALNG--EAKSK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI+P +   K+++ DR + S  AY     S     + +L  I+
Sbjct: 55  IAEMFLFLADRAEHIEEVIKPNI--DKMIISDRSVISGIAYAS---SLPIEVVTTLNLIA 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYF 162
            +  +P  TI+L+L  D   KR+ N+ +   ES  +DY 
Sbjct: 110 TENTLPSHTILLELSKDELTKRLGNKSNDSIESRGIDYL 148


>gi|225376152|ref|ZP_03753373.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM
           16841]
 gi|225211979|gb|EEG94333.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM
           16841]
          Length = 206

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ +G  G GK+T I  +K  L+   Y V++TREP  T      R        ++  
Sbjct: 9   GYFIAVDGPNGVGKSTLIEAIKNKLEVLGYAVYITREPTDTKLGNYLREF-----AEKHS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + A + AA R +H+ N I PAL EG++++ DR++ SS   Q     S    L +  EI
Sbjct: 64  GISLACLVAADRYEHMTNEIIPALEEGQLVISDRYILSSLILQEMDGVSATFVLTANSEI 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL-------RESACLDYFER 164
               + PD  + +     +  KR+  R +L       +  + LD+ ER
Sbjct: 124 ----IKPDLQLAVFADERVLQKRLSERDTLTRFEKGNQSKSELDFMER 167


>gi|325973666|ref|YP_004250730.1| thymidylate kinase [Mycoplasma suis str. Illinois]
 gi|323652268|gb|ADX98350.1| thymidylate kinase [Mycoplasma suis str. Illinois]
          Length = 218

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR------KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +FI  EG++ +GKTT I+ LK+ L        K   +H T EP G P     +   LS  
Sbjct: 1   MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYG-PEEFKEKFSELSSP 59

Query: 59  V----DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +           E+++F A R +H++  I+P L E  +L+CDR+  S+ AYQ        
Sbjct: 60  IFSNSYSLSPVTESLLFLAIRAEHLKTFIKPKLEENSLLICDRYFLSTLAYQSYLKGVSC 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDL 138
            +L S  +   +   P+   I+++
Sbjct: 120 EWLSSNMKFISEGFSPNLVFIVNV 143


>gi|70607738|ref|YP_256608.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
 gi|68568386|gb|AAY81315.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
          Length = 213

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 14/149 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---TREPGGTPAAEAARHVLLSCGVD 60
           G+ I+FEGI+G+GK++  SLLK +L ++ Y       + E       EA +  LL+    
Sbjct: 3   GILIAFEGIDGSGKSSQASLLKSWLSKRRYTFITEWNSSEWIHDIIKEAKKKNLLT---- 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  +++ A    D  E  I P L  G +++ DR++ ++YA    RDS + + ++ +
Sbjct: 59  ---PLTFSLIHATDFADRYEKYILPMLKCGFVVIADRYIYTAYA----RDSVRGVDIEWV 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN 149
           +++    V PD T  + +P ++ LKR+++
Sbjct: 112 KKLYSFAVKPDITFYIRVPSEVALKRLKS 140


>gi|207110221|ref|ZP_03244383.1| thymidylate kinase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 81

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 9/88 (10%)

Query: 5  LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
          +++  EG++GAGK+T + LLK RF      +   T+EPGGT   E+ R + L+  + E  
Sbjct: 1  MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKIGESLRRIALNENISEL- 54

Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGK 91
            A A +F + R +HVE+VI+PAL   K
Sbjct: 55 --ARAFLFLSDRAEHVESVIKPALKRKK 80


>gi|85057502|ref|YP_456418.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789607|gb|ABC65339.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 210

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG++G+GKTT I  +++ L+++ ++V   +  G +   +  R + L+    +     
Sbjct: 4   IVFEGLDGSGKTTLIQKIRKQLEKQGHEVINLQGLGSSSIGQPLRDIFLTN--SQLKPLT 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSLQEI 123
             ++  A      E  I+P L   KI+L DR+L S+ AYQ      D +  LF      +
Sbjct: 62  RYLLSFANMQQIQEEEIKPHLATNKIILIDRWLGSNLAYQAYPHNIDKNYQLF----NLL 117

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYFER 164
           + Q + P+ T+ L +   +GL+R QN    +  + E+  L YF +
Sbjct: 118 NKQFIKPNMTVYLKIKPQLGLERKQNQKDHKLDVIETHPLSYFHQ 162


>gi|325990109|ref|YP_004249808.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis KI3806]
 gi|323575194|emb|CBZ40859.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis]
          Length = 218

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 11/144 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR------KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +FI  EG++ +GKTT I+ LK+ L        K   +H T EP G P     +   LS  
Sbjct: 1   MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYG-PEEFKEKFSELSSP 59

Query: 59  V----DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +           E+++F A R +H+   I+P L E  +L+CDR+  S+ AYQ        
Sbjct: 60  IFSNSYSLSPVTESLLFLAIRAEHLRKFIKPKLEENSLLICDRYFLSTLAYQSHLKGVSC 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDL 138
            +L S  +   +   P+   I+++
Sbjct: 120 EWLSSNMKFISEGFSPNLVFIVNV 143


>gi|315636925|ref|ZP_07892149.1| thymidylate kinase [Arcobacter butzleri JV22]
 gi|315478755|gb|EFU69464.1| thymidylate kinase [Arcobacter butzleri JV22]
          Length = 189

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 12/159 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++S EGI+ AGK+T +++    L++K  +   T+EPGGT      R   ++ G +   +
Sbjct: 1   MYVSIEGIDTAGKSTQLNI----LEKKFPNAIFTKEPGGTALGIKLRA--MALGGEAKSS 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI+P   +  +++ DR + S  AY  + +  +   L  L  I+
Sbjct: 55  IAEMFLFLADRAEHIEEVIKPN--KNSLVISDRSMVSGIAYANQFEIDK---LVELNLIA 109

Query: 125 VQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYF 162
              ++P   I+L+L P ++  +  Q      E   +DY 
Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKANDSIELRGIDYL 148


>gi|148926934|ref|ZP_01810611.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845018|gb|EDK22115.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 192

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           ++   P   I L+   ++    +Q R S +E   LD  E++ +
Sbjct: 111 LENFFPQKIIFLEGDANL----IQERLSQKE---LDSIEKRGI 146


>gi|213419385|ref|ZP_03352451.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 133

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 11/141 (7%)

Query: 79  VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL 138
           VE VI+PAL +G  ++ DR   S+ AYQG         L +L++  + +  PD T+ LD+
Sbjct: 2   VETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDV 61

Query: 139 PVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS 196
             ++GLKR + R  L   E    D+F R         R  +L++A  Q  R   +D+   
Sbjct: 62  TPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLELA-AQDSRIRTIDATQP 112

Query: 197 FQSVATNILNIVWELVQKRVS 217
             +V  +I   V + VQ++ +
Sbjct: 113 LDAVMRDIRATVTKWVQEQAA 133


>gi|297619540|ref|YP_003707645.1| thymidylate kinase [Methanococcus voltae A3]
 gi|297378517|gb|ADI36672.1| thymidylate kinase [Methanococcus voltae A3]
          Length = 223

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G+GK+T   +L   +     +  +  EP  +   +  R   LS G   F  E
Sbjct: 28  FIVFEGIDGSGKSTQAKMLADRI-----NAILDYEPTNSEVGKLIRKG-LSEGC--FEKE 79

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FA  R++H + + +   +E   ++CDR++ SS  YQ    ++Q + ++ +  I+ 
Sbjct: 80  TLALLFAGDRVEHCKELAKK--LEKNHIVCDRYVYSSIVYQ----NTQGIDIEYIYNINR 133

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
              +PD  ++LDL  ++ + RV +R    E      F++   +I EK  QIF D
Sbjct: 134 YARVPDIVVLLDLNPELSMLRVNDRTGNNEIFEKIEFQK---IIREKYLQIFED 184


>gi|196234358|ref|ZP_03133186.1| dTMP kinase [Chthoniobacter flavus Ellin428]
 gi|196221550|gb|EDY16092.1| dTMP kinase [Chthoniobacter flavus Ellin428]
          Length = 245

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 15/149 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG----TPAAEAARHVLLSCG 58
           SG  ++ EG++G+GK+T I L+KR+L+ + Y V  T            ++  +  LL+  
Sbjct: 27  SGKLLAVEGLDGSGKSTQIYLVKRWLELEGYRVFFTEWNSSILVKKSTSKGKKRQLLT-- 84

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                    +++ A    D  E  I P L  G ++LCDR++ ++ A    RD+ + +  D
Sbjct: 85  -----PTTFSLIHATDFADRYERQILPLLRAGYLVLCDRYIFTALA----RDAVRGVDRD 135

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147
            ++++    V+PD T+   +P++  L R+
Sbjct: 136 WVEQLYSFAVLPDITLYFRVPLETSLNRI 164


>gi|319956694|ref|YP_004167957.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419098|gb|ADV46208.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511]
          Length = 191

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 8/133 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T I    R +  ++ +  +TREPGGT   E AR +LL   +     
Sbjct: 1   MYVLFEGIDTCGKSTQI----RLIAAEHPEAIITREPGGTRFGEKAREILLEAKLQ--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H E ++RP     K+L+ DR   S   Y           L +L   +
Sbjct: 55  RAELLLFLADRAEHYEEIVRPN--RDKLLISDRGFLSGIGYALANGGVSLEELIALNHFA 112

Query: 125 VQEVMPDCTIILD 137
           +Q   PD  I  +
Sbjct: 113 LQGDWPDHIIFFE 125


>gi|159028337|emb|CAO87235.1| tmk [Microcystis aeruginosa PCC 7806]
          Length = 207

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 22/216 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----D 60
           FI FEGI+G+G +T   LL+ +  ++     ++ EP         R ++ +  +     +
Sbjct: 5   FIVFEGIDGSGTSTQAKLLQEYFFKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIQEQN 64

Query: 61  EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +F  +  A +FAA R  H+ N    V +    E   ++  R+  SS AY    +  +  F
Sbjct: 65  QFDRQM-AYLFAADRHYHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNC-NNPEEFAF 122

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L +       PD  I +D+  DI L R++NR      A  + +E+++ ++  K RQ+
Sbjct: 123 VRQLNQ---HFPNPDIVIYIDVIPDISLARIKNR------AITEVYEKQEKLM--KVRQM 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F++I +   D    +D   + + +  NI+N + +L+
Sbjct: 172 FIEIFKEYKDNYLQLDGNDTIEHLHRNIINYLEQLI 207


>gi|15790812|ref|NP_280636.1| thymidylate kinase [Halobacterium sp. NRC-1]
 gi|169236558|ref|YP_001689758.1| thymidylate kinase [Halobacterium salinarum R1]
 gi|14285513|sp|Q9HNV4|KTHY_HALSA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|229621738|sp|B0R6P3|KTHY_HALS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|10581368|gb|AAG20116.1| thymidylate kinase [Halobacterium sp. NRC-1]
 gi|167727624|emb|CAP14412.1| dTMP kinase [Halobacterium salinarum R1]
          Length = 199

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           + ++ EG++G+GKTT    L     R ++D  V  T EP  +   +A R    +   D  
Sbjct: 1   MLVTLEGLDGSGKTTVWESL-----RASHDDGVTFTAEPTDSQYGQAVRRSESAADADPI 55

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL--FLD 118
              AE  +F A   DH+  V+ PAL  G +++ DR+ DS YAYQG    D+      ++ 
Sbjct: 56  ---AELFLFTADHADHLSRVVSPALDRGDVVISDRYSDSRYAYQGATLADTVPRAMEYVR 112

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + +   +   PD T+  D+  D G  R
Sbjct: 113 GIHQPWTRP--PDVTLYFDVDPDTGAAR 138


>gi|15897682|ref|NP_342287.1| thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
 gi|227830328|ref|YP_002832108.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|229579145|ref|YP_002837543.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|229582100|ref|YP_002840499.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
 gi|284997753|ref|YP_003419520.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
 gi|11133144|sp|Q9UXG7|KTHY1_SULSO RecName: Full=Probable thymidylate kinase 1; AltName: Full=dTMP
           kinase 1
 gi|6015696|emb|CAB57523.1| thymidylate kinase [Sulfolobus solfataricus P2]
 gi|13813955|gb|AAK41077.1| Thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
 gi|227456776|gb|ACP35463.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|228009859|gb|ACP45621.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|228012816|gb|ACP48577.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
 gi|284445648|gb|ADB87150.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
          Length = 189

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 13/145 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I+ EGI+G+GKTT  +LLK  L+ K   +V VTRE    P +E    ++   G ++   
Sbjct: 4   LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTRE----PFSEDIIKLIEKIGWND--P 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++FAA R  HV  + +  + +  +++ DR+  SS AYQG     +      ++ ++
Sbjct: 58  ILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQW----IKMVN 111

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN 149
                PD  I+LDLP+++ + R++N
Sbjct: 112 SYFPKPDMVILLDLPIEVAISRIKN 136


>gi|255322189|ref|ZP_05363335.1| thymidylate kinase [Campylobacter showae RM3277]
 gi|255300562|gb|EET79833.1| thymidylate kinase [Campylobacter showae RM3277]
          Length = 192

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 12/128 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+GAGK+T I+ L     +      VT+EPGGT   E  R +LL    ++   
Sbjct: 1   MYILFEGIDGAGKSTQIARLAAAYTQ----AIVTKEPGGTKLGENLREILLK--ENDLDK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDSLQE 122
            AE ++F A R +H   +I+P L   K++L DR   S  +YA  G   S + L   +L +
Sbjct: 55  RAEILLFLADRAEHFGKIIKPNL--DKMILSDRGFVSGMAYALAGGNFSFEELL--NLNK 110

Query: 123 ISVQEVMP 130
            ++Q   P
Sbjct: 111 FALQGNFP 118


>gi|325474687|gb|EGC77873.1| thymidylate kinase [Treponema denticola F0402]
          Length = 209

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%)

Query: 6   FISFEGIEGAGKTTHISLLK-RF-LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           F+ FEGI+G+G T+ I LLK RF  + K+  V  T+EP   P     R  L   G  +  
Sbjct: 6   FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63

Query: 64  AEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            E    +FAA R +H+  +  I   + +G+ +  DR++ SS AYQ    ++    L  LQ
Sbjct: 64  PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAAD---LAKLQ 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRRQIFLD 179
                          DLPVDI + RV  R     S  L+ +E K     + ++ ++I  +
Sbjct: 121 NEGFPLPE--FLFFFDLPVDISMNRVMGR-----SNVLEIYEEKTFQYKVQDEYKKIIDE 173

Query: 180 IARNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211
               +P+    I+++    + +   + +I+ +L
Sbjct: 174 YRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206


>gi|227827632|ref|YP_002829412.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|229584836|ref|YP_002843338.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238619800|ref|YP_002914626.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|227459428|gb|ACP38114.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|228019886|gb|ACP55293.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238380870|gb|ACR41958.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|323474682|gb|ADX85288.1| dTMP kinase [Sulfolobus islandicus REY15A]
 gi|323477416|gb|ADX82654.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
          Length = 189

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 13/145 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I+ EGI+G+GKTT  +LLK  L+ K   +V VTRE    P +E    ++   G ++   
Sbjct: 4   LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTRE----PFSEDIIKLIEKIGWND--P 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++FAA R  HV  + +  + +  +++ DR+  SS AYQG     +      ++ ++
Sbjct: 58  ILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQW----IKMVN 111

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN 149
                PD  I+LDLP+++ + R++N
Sbjct: 112 SYFPKPDMVILLDLPIEVAISRIKN 136


>gi|170290822|ref|YP_001737638.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174902|gb|ACB07955.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 191

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 12/146 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++FEGI+GAGKTT    L   L         T+EP      +  +  L   G  E   
Sbjct: 1   MLVAFEGIDGAGKTTQSRRLLDKLMELGMRAIYTKEPTDGEIGKILKKAL--KGEIELDQ 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++FAA R++H    IR   ++G I++ DR+L SS AYQG       L +  + E++
Sbjct: 59  RTIALLFAADRIEH----IRSLKVDG-IIILDRYLLSSLAYQG-----AFLPIQWINELN 108

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150
               +PD    LD+  D+ + R++++
Sbjct: 109 RWVRLPDIVFYLDISPDVAISRIEDK 134


>gi|304314109|ref|YP_003849256.1| thymidylate kinase [Methanothermobacter marburgensis str. Marburg]
 gi|302587568|gb|ADL57943.1| predicted thymidylate kinase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 194

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           ++I FEGI+G+GKTTH  L   +L+   Y V   REP  +      R +L S       G
Sbjct: 1   MYICFEGIDGSGKTTHSVLTAEWLRENGYRVFTVREPTDSRIGGLIREMLSSPDARTPDG 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               A++FAA RL     +       G +++ DR   SS  YQ           + + EI
Sbjct: 61  QRILALLFAADRLTLRSKI--EGEWSGSVVVSDRCYYSSMVYQEP--------AEWVSEI 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  I+LDL V++ ++R        + + L     + + + +K     +D AR 
Sbjct: 111 NRFAPQPDIVILLDLDVELAMERCGGTDEFEDPSFLSRVRERYLELADKNEFYIVDAARG 170


>gi|157737212|ref|YP_001489895.1| thymidylate kinase [Arcobacter butzleri RM4018]
 gi|254808274|sp|A8ETF2|KTHY_ARCB4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157699066|gb|ABV67226.1| thymidylate kinase [Arcobacter butzleri RM4018]
          Length = 189

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++S EGI+ AGK+T +++L++      +    T+EPGGT      R   ++ G +   +
Sbjct: 1   MYVSIEGIDTAGKSTQLNILEKTFPNAIF----TKEPGGTALGIKLRA--MALGGEAKSS 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI+P   +  +++ DR + S  AY  + +  +   L  L  I+
Sbjct: 55  IAEMFLFLADRAEHIEEVIKPN--KNSLVISDRSVVSGIAYANQFEIDK---LIELNLIA 109

Query: 125 VQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYF 162
              ++P   I+L+L P ++  +  Q      E   +DY 
Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKANDSIELRGIDYL 148


>gi|42528099|ref|NP_973197.1| thymidylate kinase [Treponema denticola ATCC 35405]
 gi|41819144|gb|AAS13116.1| thymidylate kinase [Treponema denticola ATCC 35405]
          Length = 209

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%)

Query: 6   FISFEGIEGAGKTTHISLLK-RF-LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           F+ FEGI+G+G T+ I LLK RF  + K+  V  T+EP   P     R  L   G  +  
Sbjct: 6   FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63

Query: 64  AEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            E    +FAA R +H+  +  I   + +G+ +  DR++ SS AYQ    ++    L  LQ
Sbjct: 64  PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAAD---LAKLQ 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRRQIFLD 179
                          DLPVDI + RV  R     S  L+ +E K     + ++ ++I  +
Sbjct: 121 NDGFPLPE--FLFFFDLPVDISMNRVMGR-----SNVLEIYEEKTFQYKVQDEYKKIIDE 173

Query: 180 IARNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211
               +P+    I+++    + +   + +I+ +L
Sbjct: 174 YRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206


>gi|86152174|ref|ZP_01070386.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153341|ref|ZP_01071545.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121612951|ref|YP_001000455.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|283957252|ref|ZP_06374713.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336]
 gi|315124289|ref|YP_004066293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|166221735|sp|A1VZB4|KTHY_CAMJJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|85840959|gb|EAQ58209.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85843067|gb|EAQ60278.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249371|gb|EAQ72331.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|283791264|gb|EFC30072.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336]
 gi|315018011|gb|ADT66104.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 192

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++  + + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILK--INQNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           ++   P   I L    ++    +Q R S +E   LD  E++ +
Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146


>gi|57237611|ref|YP_178859.1| thymidylate kinase [Campylobacter jejuni RM1221]
 gi|86150209|ref|ZP_01068436.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597533|ref|ZP_01100767.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|205356734|ref|ZP_03223494.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218562394|ref|YP_002344173.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|14285520|sp|Q9PPF3|KTHY_CAMJE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920815|sp|Q5HV26|KTHY_CAMJR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|57166415|gb|AAW35194.1| thymidylate kinase [Campylobacter jejuni RM1221]
 gi|85839325|gb|EAQ56587.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190125|gb|EAQ94100.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360100|emb|CAL34894.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|205345373|gb|EDZ32016.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|315058220|gb|ADT72549.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni S3]
 gi|315928307|gb|EFV07623.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929197|gb|EFV08419.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 305]
          Length = 192

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           ++   P   I L    ++    +Q R S +E   LD  E++ +
Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146


>gi|307721020|ref|YP_003892160.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294]
 gi|306979113|gb|ADN09148.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294]
          Length = 191

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 14/137 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I+ LK+   +       T+EPGGT   +  R ++LS        
Sbjct: 1   MYIAIEGIDTAGKSTQIAALKKHFPQ----AVTTKEPGGTEIGKEIREMVLSAKTK--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSLQ 121
            AE ++F A R +H++ VI P L   K+++ DR   S  AY   Q + D+   ++L+   
Sbjct: 55  RAEFLLFLADRAEHIKEVIEPNLH--KVIISDRSAVSGVAYALIQEDIDTKDLVYLN--- 109

Query: 122 EISVQEVMPDCTIILDL 138
           + + +++ P    +L L
Sbjct: 110 DFATKKIYPKKIFLLRL 126


>gi|157415037|ref|YP_001482293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047110|sp|A8FLH9|KTHY_CAMJ8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157386001|gb|ABV52316.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315931181|gb|EFV10153.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 327]
          Length = 192

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           ++   P   I L    ++    +Q R S +E   LD  E++ +
Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146


>gi|14161247|gb|AAK54673.1|AF251151_2 TMP kinase [Loofah witches'-broom phytoplasma]
          Length = 209

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 104/209 (49%), Gaps = 12/209 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKTT I  L++ L+++  +  + +  G +      R++ L+    ++   
Sbjct: 3   LIVFEGLDGSGKTTLIQELQQKLKKQKINNKIYQGLGSSSIGTEIRNLFLNYNQVDYITR 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQE 122
               +   A++   + +I P L + ++++ DR+L S+YAYQ     + +     L  L +
Sbjct: 63  FYLSITNMAQIQ--KELIYPHLKQNQLIILDRWLPSTYAYQLFPYLKQTKSCFDLKELFD 120

Query: 123 ISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-RRQIFLD 179
           I+ ++  + P   I LD+   IG +R Q     +++  LD  E+K +  H+   +  +  
Sbjct: 121 ITHKKLFIQPHLLIYLDINPLIGKERKQT----QKNHQLDIIEQKSLTYHQTVHKGYYHY 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +   Q ++  I++   S QS  T I+ ++
Sbjct: 177 LTHYQNNKQLILNGIDSLQSNVTKIMKLI 205


>gi|307747676|gb|ADN90946.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni M1]
          Length = 192

 Score = 62.0 bits (149), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKTH--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           ++   P   I L    ++    +Q R S +E   LD  E++ +
Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146


>gi|224372857|ref|YP_002607229.1| thymidylate kinase [Nautilia profundicola AmH]
 gi|254808301|sp|B9L9C1|KTHY_NAUPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|223588410|gb|ACM92146.1| thymidylate kinase [Nautilia profundicola AmH]
          Length = 194

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 11/158 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I LLK   + KN ++   +EPG T      R ++ +   D+   
Sbjct: 1   MYIALEGIDTAGKSTQIELLKN--EYKN-NILFIKEPGFTKFGTKIREIIFN---DDISK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A R + +E  ++P L   K +L DR + S  AY  E      L   +L + +
Sbjct: 55  KAELFLFLADRAETIEKFVKPNL--HKNILTDRSVISGIAYAMEFFDFNMLV--NLNKFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDY 161
              + P+  IIL L  +    R+ Q  +   E   LDY
Sbjct: 111 TDGIFPEFVIILKLDKETLQYRLSQKNHDNIEKRGLDY 148


>gi|153951111|ref|YP_001398306.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166221734|sp|A7H476|KTHY_CAMJD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|152938557|gb|ABS43298.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 192

 Score = 62.0 bits (149), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFTLNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           +++  P   I L    ++    +Q R S +E   LD  E++ +
Sbjct: 111 LEDFFPQKIIFLKGDENL----IQERLSQKE---LDSIEKRGI 146


>gi|223040987|ref|ZP_03611247.1| thymidylate kinase [Campylobacter rectus RM3267]
 gi|222877743|gb|EEF12864.1| thymidylate kinase [Campylobacter rectus RM3267]
          Length = 192

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 12/134 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+GAGK+T I+ L     +      VT+EPGGT   E  R +LL    ++   
Sbjct: 1   MYILFEGIDGAGKSTQIARLATAYPQ----AIVTKEPGGTKLGENLREILLKE--NDLDK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDSLQE 122
            AE ++F A R +H   +I+P     K++L DR   S  +YA  G   S + L   SL +
Sbjct: 55  RAEILLFLADRAEHSGKIIKPN--SDKMILSDRGFVSGMAYALAGGNFSFEELL--SLNK 110

Query: 123 ISVQEVMPDCTIIL 136
            ++Q   P   +  
Sbjct: 111 FALQGNFPQKIVFF 124


>gi|284926012|gb|ADC28364.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 192

 Score = 61.6 bits (148), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 17/163 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           ++   P   I L     +    +Q R S +E   LD  E++ +
Sbjct: 111 LENFFPQKIIFLKGDASL----IQERLSQKE---LDSIEKRGI 146


>gi|312136656|ref|YP_004003993.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
 gi|311224375|gb|ADP77231.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
          Length = 196

 Score = 61.2 bits (147), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 12/199 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+FEGI+G+GKTT    +  +L+R  Y V     P      + A+ +L   G  ++  
Sbjct: 1   MYIAFEGIDGSGKTTICKYISSYLRRNGYKVLTVGFPSNNEIGKLAKKML--KGEIKWNE 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++  A  L    + I+  L  G I+L DR   SS AY+       HL  + +++I 
Sbjct: 59  IAFELLITADML-QCNHKIKKFLKNGGIVLSDRSPYSSIAYR------PHL-RNWIEKIH 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD  I LD+ VD  LKR+       +   L+   R  + + ++    F+ I  N+
Sbjct: 111 KPLIKPDIVIFLDVSVDNALKRIYKHDKYEKKKYLEIARRTYLRLSKELN--FVKINANK 168

Query: 185 PDRCHIVDSAHSFQSVATN 203
             +   +D  H  +S   N
Sbjct: 169 NFKKVFLDVKHIIESSVKN 187


>gi|224418120|ref|ZP_03656126.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|253827447|ref|ZP_04870332.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313141655|ref|ZP_07803848.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
 gi|253510853|gb|EES89512.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313130686|gb|EFR48303.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
          Length = 194

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 10/146 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EGI+ +GK+T I  LK F ++  +    T EPG T      R +LL   + +  +
Sbjct: 1   MYVAIEGIDTSGKSTQIQALKLFFKKAIF----TFEPGATNLGVRLREILLQDSI-QLDS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H   +++       +++ DR L S  AY  + D      L +    +
Sbjct: 56  RAEMLLFLADRAQHANEILQSH--ANNLIIADRSLISGMAYAKDFDFDT---LKTFNLFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150
            Q ++P+  IIL+L  D   KR+ ++
Sbjct: 111 TQGILPNKVIILELQKDDLQKRLNSK 136


>gi|124005922|ref|ZP_01690760.1| thymidylate kinase [Microscilla marina ATCC 23134]
 gi|123988605|gb|EAY28246.1| thymidylate kinase [Microscilla marina ATCC 23134]
          Length = 232

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 22/198 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSCG-VDE 61
           FI  EG++G+GK+T + L+   LQ    K   +H      G      A  +    G +D+
Sbjct: 7   FIVIEGLDGSGKSTQLKLITAHLQNAGIKYQHIHFPVMGEGYYGQLTAEFLRGDLGALDQ 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-------QGERDSSQH 114
              +  A++FA  R++H+E  I   L +G +++ DR+++S+ A+       Q E+D+ + 
Sbjct: 67  VHPKIAALIFAGNRVEHLEQ-INQWLADGYVVIADRYVNSNIAFQCAKFDNQTEKDTLKK 125

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM------ 168
             L+   E ++    P  ++ LD+P     K + N+   RE     Y + K  +      
Sbjct: 126 WILEFEYEFNLLP-RPASSLFLDVPFASIKKSLTNQ---REGDDRAYLQGKSDIHEDSLD 181

Query: 169 IHEKRRQIFLDIARNQPD 186
           + EK RQ +L + + QPD
Sbjct: 182 LQEKVRQEYLQMVKEQPD 199


>gi|224437631|ref|ZP_03658584.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818]
 gi|313144083|ref|ZP_07806276.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818]
 gi|313129114|gb|EFR46731.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818]
          Length = 201

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 18/140 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58
           +++  EG++  GK+T + LLK+   +  +    T+EPGG+   E+ R ++L         
Sbjct: 1   MYVVIEGVDTCGKSTQLELLKKHFPQAVF----TKEPGGSVIGESLRDLILFAPQRQGFV 56

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +DE+   AE ++F A R  H + V++P   + ++++ DR L SS AY    D  + + L+
Sbjct: 57  LDEY---AEFMLFLADRAQHYKEVLKPH--KNRLVISDRSLISSIAYAKHIDMDKAIMLN 111

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L    ++ ++P   +IL L
Sbjct: 112 KL---VLRGILPQLVVILKL 128


>gi|148264611|ref|YP_001231317.1| dTMP kinase [Geobacter uraniireducens Rf4]
 gi|146398111|gb|ABQ26744.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 228

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 17/149 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----RHVLLSCG 58
           G  I+ EG++G+GK+T + LLKR+L+ +   V+ T         +A      R +L    
Sbjct: 11  GKLIAVEGLDGSGKSTQLYLLKRWLELRGLKVYFTEWNSSVIVKKATSKGKKRQLLTPTT 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                    +++ +A   D  E  I P L  G ++LCDR++ +++A    R  S+  +L 
Sbjct: 71  F--------SLIHSADLADRYERQILPLLKAGYLVLCDRYVYTAFARDAVRGCSRT-WLR 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147
           +L   +     PD T+  D P+ + L R+
Sbjct: 122 NLYGFARH---PDLTLFFDTPLSVALSRI 147


>gi|216906057|ref|YP_002333648.1| thymidylate kinase [Abalone shriveling syndrome-associated virus]
 gi|216263150|gb|ACJ71974.1| thymidylate kinase [Abalone shriveling syndrome-associated virus]
          Length = 270

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 9/105 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEF 62
           +FI+ EGI+  GK+T    L+R F Q  +  + +T EP      +   +   LS      
Sbjct: 1   MFITIEGIDKIGKSTVAQGLQRKFSQYSDNSIVLTHEPFNFNGLSNFLKKYQLS------ 54

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
            ++ E ++  AAR++H   +I PA+  G I++CDRF+DS+  YQG
Sbjct: 55  -SKVEILIQTAARIEHATRLINPAISSGSIVICDRFIDSTIVYQG 98


>gi|170077931|ref|YP_001734569.1| thymidylate kinase [Synechococcus sp. PCC 7002]
 gi|169885600|gb|ACA99313.1| thymidylate kinase [Synechococcus sp. PCC 7002]
          Length = 219

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 19/210 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEF 62
           FI FEGI+G+G +T   LL +  QR+     ++ EP         R  L   L    D  
Sbjct: 9   FIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDPV 68

Query: 63  GAEAE-AIVFAAARLDHVENVIR---PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               + A +FA  R DH+ N I      L  G  ++  R+  SS AY    +++++ F+ 
Sbjct: 69  QLNRQLAYLFAGDRHDHLYNEIDGVFKQLAAGIQVITTRYYFSSLAYNAN-NAAEYEFIY 127

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L +       PD     DLPV++ L+RVQ R      +  + +E K  +   + RQ + 
Sbjct: 128 RLNQDFPN---PDLVFYCDLPVEVALERVQRR------SHQEIYETKAKLT--QVRQNYQ 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            I +  P     +D+    +++   IL  +
Sbjct: 177 QIFQTYPGNWQQLDATQPPETIHQQILQTI 206


>gi|150399111|ref|YP_001322878.1| thymidylate kinase [Methanococcus vannielii SB]
 gi|166221757|sp|A6UP44|KTHY_METVS RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|150011814|gb|ABR54266.1| dTMP kinase [Methanococcus vannielii SB]
          Length = 198

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 14/145 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G+GKTT   +L   L     +   T EP         R VL      E   E
Sbjct: 4   FIVFEGIDGSGKTTQAKMLAEKL-----NAEYTCEPTTGKIGRTIREVLSG---SECKKE 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FAA R++HV  +    +++   ++ DR++ SS  YQ  +  S+      +  I+ 
Sbjct: 56  TLALLFAADRVEHVSEI--EKMLQKSHVVTDRYVYSSIIYQTMQGISKEF----IYSINF 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150
              +PD  +ILD+  +  LKR++ R
Sbjct: 110 FAKIPDIVVILDVDTEEALKRMEFR 134


>gi|254457836|ref|ZP_05071263.1| thymidylate kinase [Campylobacterales bacterium GD 1]
 gi|207085229|gb|EDZ62514.1| thymidylate kinase [Campylobacterales bacterium GD 1]
          Length = 190

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 13/108 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           ++I+ EGI+ AGK+T I  LK     +N+ D  +T+EPG T   +  R ++LS       
Sbjct: 1   MYIAIEGIDTAGKSTQIQKLK-----ENFPDAIITKEPGATAIGKEIREIVLSAKAQ--S 53

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGE 108
            +AE ++F A R +H++ V+ P L   K+++ DR   S  AY   QGE
Sbjct: 54  KKAEFLLFLADRAEHIKEVVEPNL--DKMIISDRSAVSGVAYALIQGE 99


>gi|39998390|ref|NP_954341.1| hypothetical protein GSU3301 [Geobacter sulfurreducens PCA]
 gi|39985336|gb|AAR36691.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298507331|gb|ADI86054.1| thymidylate kinase, putative [Geobacter sulfurreducens KN400]
          Length = 211

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 13/174 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTH--ISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G  I  EGI G+G+     I  L   L    YDV     P    A E     LL+  
Sbjct: 1   MRKGKLIVIEGISGSGQQVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLNW- 59

Query: 59  VDEFG--AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
              FG    A+ +  +A R +  +NV+ PAL + KI+LC +   SS A       ++H  
Sbjct: 60  --PFGRTPRADFLFESAVRTEVFKNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFD 117

Query: 116 FLDSLQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
            L  + +IS       E+ PD TI +D+P     +R+++   +     +DY+ +
Sbjct: 118 VLRHIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQIHHEGGIDYYNQ 171


>gi|325958282|ref|YP_004289748.1| Thymidylate kinase [Methanobacterium sp. AL-21]
 gi|325329714|gb|ADZ08776.1| Thymidylate kinase [Methanobacterium sp. AL-21]
          Length = 191

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 23/205 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFG 63
           ++I  EGI+G+GKTT I LL+ ++Q+   DV    EP      +  R +L +   ++E  
Sbjct: 1   MYICLEGIDGSGKTTQIKLLESWIQKCGIDVLRVFEPTDNEVGKLIRKLLQNPDAINENF 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               A++FAA R   + ++     +  KI++ DR   SS  YQ +         + + EI
Sbjct: 61  QITLALLFAADRTVLMRDITEAEAL-AKIVISDRSFYSSMVYQNDS--------EWIAEI 111

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  I+LD+  +  + R            +D FE ++ +    ++  +L++A +
Sbjct: 112 NKHAKQPDLVILLDINPETAVSRCDG---------MDSFEEQNFLASTAKK--YLELADH 160

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           Q     +V++ +    V  +I  IV
Sbjct: 161 Q--NFMVVNANNGINKVHDDIKRIV 183


>gi|242309052|ref|ZP_04808207.1| dTMP kinase [Helicobacter pullorum MIT 98-5489]
 gi|239524476|gb|EEQ64342.1| dTMP kinase [Helicobacter pullorum MIT 98-5489]
          Length = 189

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 14/185 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+ +GK+T I  LK  LQ   +    T EPG TP  +  R +LL   + E  +
Sbjct: 1   MYVVIEGIDTSGKSTQIQELKLALQEAIF----TFEPGATPLGKKLRKILLEDSI-ELDS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A R  H   +++      K+++ DR L S  AY  + D      L +    +
Sbjct: 56  RTEMLLFLADRAQHTHEILKAN--PDKLIISDRSLISGMAYAKDFDFET---LKAFNLFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDY---FERKDVMIHEKRRQIFLDI 180
            Q ++P   I L+L  +   +R+Q++   + E   L+Y    +++   I +K +  ++ I
Sbjct: 111 TQGILPQKVIFLELQKEDLQQRLQSKNEDKIEQRGLEYLLELQQRTKAIIKKLQLPYISI 170

Query: 181 ARNQP 185
             N P
Sbjct: 171 NANLP 175


>gi|15679753|ref|NP_276871.1| thymidylate kinase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|6016460|sp|O27793|KTHY_METTH RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|2622895|gb|AAB86231.1| thymidylate kinase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 194

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 15/145 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+G+GKTTH +L   +L+   Y VH  REP  +      R +L S   D    
Sbjct: 1   MYICFEGIDGSGKTTHAALTASWLRENGYMVHEVREPTDSNIGSLIRSMLSS--PDARTP 58

Query: 65  EAE---AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + +   A++FAA RL  + + I     E  +++ DR   SS  YQG          + + 
Sbjct: 59  DVQRMLALLFAADRL-TLRSKIEGDWAE-DVVVSDRCYYSSMVYQGPE--------EWVC 108

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
           EI+     PD  I+LD+ V++ ++R
Sbjct: 109 EINRFAPRPDVVILLDIDVEVAMER 133


>gi|32266861|ref|NP_860893.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449]
 gi|46576464|sp|Q7VGF9|KTHY_HELHP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|32262913|gb|AAP77959.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449]
          Length = 195

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63
           ++++ EG++  GK+T I LLK +  +  +    T+EPGG+   E  R ++L     ++G 
Sbjct: 1   MYVAIEGVDTCGKSTQIQLLKAYYPQAVF----TKEPGGSIIGEHIRDLVL-FAPKKYGF 55

Query: 64  ---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++F A R  H   V+ P   + K+++ DR + S  AY    D +Q +   +L
Sbjct: 56  TLDERAELMLFLADRAQHYAQVLLPH--KDKLIISDRSVISGIAYAKSIDIAQSI---AL 110

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR-----------YSLRESACLDYFERKDVMI 169
            +  ++ ++PD  +IL+L      +R++++           Y L    C      K+V+ 
Sbjct: 111 NDFVLRGMLPDLVVILELDEKSLKERIESKSHDNIESRGISYMLEIQKCF-----KNVVT 165

Query: 170 HEKRRQIFLDIARNQPDRC 188
               + I LD  +++   C
Sbjct: 166 QMNLKYIVLDATQDKERIC 184


>gi|303244545|ref|ZP_07330879.1| thymidylate kinase [Methanothermococcus okinawensis IH1]
 gi|302485093|gb|EFL48023.1| thymidylate kinase [Methanothermococcus okinawensis IH1]
          Length = 195

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 31/216 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G+GKTT   LL   +  K      T EP      +  R +L     ++   E
Sbjct: 5   FIVFEGIDGSGKTTQSKLLAEKINGK-----YTCEPTNGDIGKLIRDILSGKKCEK---E 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FAA R++HV ++     ++   ++CDR++ SS  YQ    + Q + L+ +  I+ 
Sbjct: 57  TLALLFAADRVEHVVDI--EQHLKKTHIVCDRYVYSSMVYQ----AIQGIDLNFIMNINQ 110

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-- 183
               PD  I LD+ V+   KR+  +         + FE K+++   K R  + +I +   
Sbjct: 111 FAKKPDILIFLDVDVEESFKRMNGKNK-------EIFENKEML--NKVRAKYYEIIKKRL 161

Query: 184 -QPDRCHIV--DSAHSFQSVATNILNIVWELVQKRV 216
            +P   +I    +  S + V  NIL    EL +K +
Sbjct: 162 FEPKYGYIKINTTGKSIEEVHDNILT---ELREKNI 194


>gi|189490439|ref|YP_001957008.1| thymidylate kinase [Pseudomonas phage 201phi2-1]
 gi|164609504|gb|ABY63113.1| thymidylate kinase [Pseudomonas phage 201phi2-1]
          Length = 357

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPA----AEAARHVLLSCG 58
           FI  +G + +GK+T   L+K FL R   +  D    REPGG P     AE  R  L++  
Sbjct: 7   FIVLDGPDFSGKST---LMKAFLARVEAEGIDHVAMREPGGIPGSGSLAEEIRVALIANR 63

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E + ++  A R+ +V+++I PAL + K ++ DRF+ S++    +     H +L 
Sbjct: 64  DERVHPETDVLLHMAYRVQNVKDIILPALADNKWVISDRFVFSTWCLNVQAHLETHPYLT 123

Query: 119 ----SLQEISVQEVMPDCTIILDLPVDIGLKRV------QNRYSLRESACLDYFE 163
                L    +Q +    T ILD P +I  +R       ++RY  + +A  D  E
Sbjct: 124 DMLYGLMPYVLQGLPEPLTFILDTPREIRDQRANSDERKKDRYESQPAAVHDRIE 178


>gi|283954334|ref|ZP_06371855.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794133|gb|EFC32881.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414]
          Length = 191

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+  GK+T ISLLK+  +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYIVFEGIDCVGKSTQISLLKKIYK----DAVFTLEPGGTELGKHLREILLNKTY-PINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A R  H E V++    + K+++ DR   S  AY  + ++     L +L   +
Sbjct: 56  RTELLLFLADRAQHFEEVLKDN--QNKLIISDRSFISGMAYAKDFEND---LLFTLNSFA 110

Query: 125 VQEVMPDCTIIL 136
           +    P   I L
Sbjct: 111 LDNFFPQKVIFL 122


>gi|78224441|ref|YP_386188.1| thymidylate kinase [Geobacter metallireducens GS-15]
 gi|78195696|gb|ABB33463.1| thymidylate kinase [Geobacter metallireducens GS-15]
          Length = 211

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 13/174 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISL--LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G  I  EGI G+G+    ++  L + L    YDV     P    A E     LL+  
Sbjct: 1   MRKGKLIVIEGISGSGQQVKAAIVGLHKALTGMKYDVVECANPDSGRAKELGIDNLLNW- 59

Query: 59  VDEFG--AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
              FG    A+ +  AA R +  +N++ PAL + KI+LC +   SS A       ++H  
Sbjct: 60  --PFGRTPRADFMFEAAVRTEVFKNIVEPALQDDKIVLCKQSSISSLANAWVSGYTKHFD 117

Query: 116 FLDSLQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
            L  ++++S       E+ PD T+ +D+P     +R+++   +     ++Y+E+
Sbjct: 118 VLRHIEKLSRGFLFEDEIYPDLTLFIDVPAQEAFERIEDVLQIHHEGGIEYYEK 171


>gi|152992943|ref|YP_001358664.1| thymidylate kinase [Sulfurovum sp. NBC37-1]
 gi|254808312|sp|A6Q9Z8|KTHY_SULNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|151424804|dbj|BAF72307.1| thymidylate kinase [Sulfurovum sp. NBC37-1]
          Length = 191

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 14/135 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+  GK+T + LL +    K+  +  T EPGGT   + AR +LLS  +     
Sbjct: 1   MYILFEGIDTCGKSTQMELLTQ----KHPGIITTHEPGGTAFGQQAREILLSDSLR--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSLQ 121
            AE ++F A R +H E V+ P     KI++ DR   S   Y    G+ D  +   L +L 
Sbjct: 55  RAELLLFLADRAEHYEEVVEPN--HDKIVVSDRGFVSGIGYALANGDFDFDE---LVALN 109

Query: 122 EISVQEVMPDCTIIL 136
             ++++  PD  I+ 
Sbjct: 110 RFALKDHFPDRIILF 124


>gi|15921837|ref|NP_377506.1| thymidylate kinase [Sulfolobus tokodaii str. 7]
 gi|23821798|sp|Q970Q8|KTHY2_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|15622624|dbj|BAB66615.1| 213aa long hypothetical thymidylate kinase [Sulfolobus tokodaii
           str. 7]
          Length = 213

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 16/149 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLS 56
           M  G+ I+FEGI+G+GK++  +LLK +++ K  DV++T             EA +  LL+
Sbjct: 1   MKKGVLIAFEGIDGSGKSSQATLLKDWIELKR-DVYLTEWNSSDWIHDIIKEAKKKDLLT 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                      +++ A    D  E  I P L  G I++ DR++ ++YA    RDS + + 
Sbjct: 60  -------PLTFSLIHATDFSDRYERYILPMLKSGFIVISDRYIYTAYA----RDSVRGVD 108

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLK 145
           +D ++++    + PD T  + +  DI L+
Sbjct: 109 IDWVKKLYSFAIKPDITFYIRVSPDIALE 137


>gi|328948690|ref|YP_004366027.1| thymidylate kinase [Treponema succinifaciens DSM 2489]
 gi|328449014|gb|AEB14730.1| Thymidylate kinase [Treponema succinifaciens DSM 2489]
          Length = 214

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 30/174 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+GAG TT + +LK     +  +   T EP  +   +  R +L   G  +   E
Sbjct: 6   FIVFEGIDGAGTTTQLEILK----SRTPEFLFTAEPTSSETGKFLRKMLK--GEIQVTNE 59

Query: 66  AEAIVFAAARLDHV-------ENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             A +FAA R +H+       EN     I+ A  +GKI++ DR+L SS AYQ        
Sbjct: 60  TAAYIFAADRNEHINGNCIIEENKLITGIKSACEKGKIVVSDRYLFSSLAYQS------- 112

Query: 115 LFLDSLQEI--SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
             +D   EI  ++ +   +P      D+  +I LKR+ +R        +D+ +R
Sbjct: 113 --IDCSPEIPRTLNKFFPLPRLLFFFDIEPEISLKRISSRGQKEIYEKIDFLKR 164


>gi|116623132|ref|YP_825288.1| thymidylate kinase/thymidylate synthase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116226294|gb|ABJ85003.1| thymidylate kinase / thymidylate synthase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 259

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 13/147 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT---PAAEAARHVLLSCGVD 60
           GL I+FEG +G+GKTT   L K +L+ + ++V  T+        P  + AR    S   +
Sbjct: 29  GLLIAFEGPDGSGKTTQRKLFKNWLKSEGHEVVTTKWNSSALIKPLVK-ARKAARSLSPE 87

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           EF     +++ AA     +E  I PAL +G++++ DR+L ++ A    RD+++ + L  L
Sbjct: 88  EF-----SLLHAADFRYRLETEILPALWQGQVVVADRYLFTALA----RDAARGMDLHWL 138

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRV 147
            E+      PD      +  +   KR+
Sbjct: 139 LEVYRPLFWPDLVFYFSVSPETSGKRI 165


>gi|45658645|ref|YP_002731.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|294827736|ref|NP_710987.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601]
 gi|59798325|sp|Q72NL9|KTHY_LEPIC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920823|sp|Q8F7Y6|KTHY_LEPIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|45601889|gb|AAS71368.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|293385579|gb|AAN48005.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601]
          Length = 204

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 4/151 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+ FEGI+G+GK+T    L   L           EP      +  R  L   G  E G 
Sbjct: 7   IFVVFEGIDGSGKSTLCKSLTEKLIELGIPSAAFTEPTNLETGKYLRKFLR--GEIELGK 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E +   F   R + ++  I PAL   K +L DR++ S+ AYQ   D S  + L   + ++
Sbjct: 65  EEQIEAFLNDREESLKQNILPALNSDKNVLLDRYMYSTAAYQSGDDLSPEMILK--KNLN 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
               +PD    LDL   I L+R+  R   +E
Sbjct: 123 RNFKIPDLLFYLDLSPSIALERLNRRKEGKE 153


>gi|330835060|ref|YP_004409788.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4]
 gi|329567199|gb|AEB95304.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4]
          Length = 209

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 36/221 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-----GTPAAEAARHVLLSCG 58
           G+ I+ EG EG+G+T H++ LK FL+ + Y V +T   G     G P A   R ++    
Sbjct: 3   GMIIALEGAEGSGRTFHVNSLKSFLEEEGYGV-ITFGLGLSKLMGEPIARKKRDIV---- 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              F      + +     D VENV++P+L  G + + D ++ +  A+   R       L+
Sbjct: 58  ---FQRRTLFLAYVTDLADQVENVVKPSLKAGFVAIADGYVSTLMAWGMTRG------LE 108

Query: 119 SLQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERK-DVMIH---- 170
                 V   +P   + L L   P +I ++R+     LR+   LD F    DV I+    
Sbjct: 109 PSWMKEVLNALPKSNLSLGLVSSPDEI-MRRI-----LRKKGTLDPFSSGIDVCINGELF 162

Query: 171 EKRRQIFLDIARNQPDRCH---IVDSAHSFQSVATNILNIV 208
              RQ   +   N  +      IVD+  SF+ V   I  IV
Sbjct: 163 SSYRQYLENFQTNLIEVMKDGTIVDTGRSFEVVKDEIAKIV 203


>gi|167957240|ref|ZP_02544314.1| thymidylate kinase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 208

 Score = 58.9 bits (141), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 13/167 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G +I  EG +G GK+T I LLK+FL +K +      EPG T      R ++ +  +    
Sbjct: 3   GKYIVIEGSDGTGKSTQIDLLKKFLNKKGFISKTIHEPGETAIGIELRKIIKNKNLPR-S 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A    ++F AAR + +  +I   L +G+ ++  R   S+  YQG     + + ++ +++I
Sbjct: 62  ARTNLLLFTAARCE-LAPIIENHLNKGEWVISSRNWLSTVVYQG---YGEGIDINEIKQI 117

Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           +        +  D T++L    D    R+ NR    + +  D FE K
Sbjct: 118 TALFTNKSYLQTDLTLVLYANTDTLRSRIINR---NDKSYRDTFESK 161


>gi|222100442|ref|YP_002535010.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359]
 gi|221572832|gb|ACM23644.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359]
          Length = 143

 Score = 58.5 bits (140), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 12/136 (8%)

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A+R   VE+ I+  L  G  ++ DR++DSS AYQG         ++ L   +
Sbjct: 4   KAELLLFLASRNLLVED-IKHYLFRGYFVVLDRYVDSSVAYQGFGRGLGKEVVEKLNAFA 62

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  L+R            L+ FE+++ +  E+ R+ +L +A   
Sbjct: 63  TDGLIPDVTFYIDIDVETALRR---------KGELNRFEKREFL--ERVRKGYLLLAEEH 111

Query: 185 PDRCHIVDSAHSFQSV 200
           P+R  I+D   + + +
Sbjct: 112 PERIVILDGNRTVEEI 127


>gi|111222127|ref|YP_712921.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a]
 gi|111149659|emb|CAJ61352.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a]
          Length = 222

 Score = 58.5 bits (140), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLF+S +G  G GK+T ++ +   L+ +   +H T EP  +P        L+    +
Sbjct: 1   MRPGLFVSVDGPGGVGKSTTLATVTEILRDQKVPIHATTEPSRSPIGN-----LIRASTN 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A A + A  R  HV   I P L  G +++ DR++ SS   Q        + + ++
Sbjct: 56  SHRGLALAHLVAGDRHHHVTTEIIPRLDAGDVVVSDRYIPSSLVLQ----RFDAITIPTI 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
            EI+   + PD  +IL          +  R + R       FER
Sbjct: 112 LEINAGLLQPDLAVIL----TAAPTAIAARMAARGGVTNSRFER 151


>gi|320012975|gb|ADW07824.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331]
          Length = 217

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 19/180 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ +G  G GK+T I  L + L  +   VH T EP     ++  R   +        
Sbjct: 6   GMFITIDGPSGVGKSTTIRALHQELTARGIPVHRTAEPT---TSDLGR--FIRAHFSHIR 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A A + AA R +HV   IRP L  G  ++ DR+L S+   Q          LD    +
Sbjct: 61  GHALACLVAADRYEHVAQEIRPRLSAGDTVISDRYLASTLVMQQLDGVPLKFLLD----L 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +   +MPD  +IL     +   R+     +NR+ L  +A       ++V++++   Q  +
Sbjct: 117 NANVLMPDLAVILTAAPALIADRISARGPRNRFHLDPTA-----PGREVLLYKAAAQTLM 171


>gi|15898046|ref|NP_342651.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2]
 gi|284175899|ref|ZP_06389868.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus 98/2]
 gi|14285510|sp|P58157|KTHY2_SULSO RecName: Full=Probable thymidylate kinase 2; AltName: Full=dTMP
           kinase 2
 gi|13814387|gb|AAK41441.1| Thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2]
 gi|261602758|gb|ACX92361.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
          Length = 213

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 16/150 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCGV 59
           GL I+FEGI+G+GK++   LLK +++ +  DV++T             EA +  +L+   
Sbjct: 3   GLLIAFEGIDGSGKSSQAVLLKDWIEMRR-DVYLTEWNSSEWIHDIIKEAKKKNMLT--- 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +   +++ A    D  E  I P L  G +++CDR++ ++YA    RD  +++  D 
Sbjct: 59  ----SITFSLIHATDFSDRYERYILPMLKSGFVVICDRYVYTAYA----RDVVRNVDFDW 110

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
           ++ +    + P+ T  + +  +I L+R++ 
Sbjct: 111 VKRLYSFAIKPNFTFYIRVTPEIALERIRK 140


>gi|38233300|ref|NP_939067.1| thymidylate kinase [Corynebacterium diphtheriae NCTC 13129]
 gi|38199559|emb|CAE49210.1| Putative thymidylate kinase [Corynebacterium diphtheriae]
          Length = 205

 Score = 58.2 bits (139), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 10/184 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I+ EGI+GAGK T +S +K   +R + DV    R      A  A R +  S G     
Sbjct: 1   MIIAIEGIDGAGKNTLVSAIK---ERFDADVIGFPRYEQSIHAKLAQRALYGSMGDLTDS 57

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A A A +FA  R D  + V+   +   K++L DR++ S+ AY   R  +  + +  +QE+
Sbjct: 58  AYAMATLFALDRYD-AKAVLGRYVGTSKVVLLDRYVASNAAYSAARTRNDAM-VQWVQEL 115

Query: 124 SVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +E+   +PD  I+L    ++  +R Q R +   S  LD +E +D  + E+  Q +  +
Sbjct: 116 EFEELGLPVPDIHILLHTSPELAAQRAQRREATDASRKLDRYE-EDAGLQERTFQAYESL 174

Query: 181 ARNQ 184
           A+ +
Sbjct: 175 AQQK 178


>gi|315452626|ref|YP_004072896.1| thymidylate kinase [Helicobacter felis ATCC 49179]
 gi|315131678|emb|CBY82306.1| thymidylate kinase [Helicobacter felis ATCC 49179]
          Length = 190

 Score = 58.2 bits (139), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 13/146 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEG++ +GK+T I+LLK    +  + +    EPGGT   E  R   L      F A
Sbjct: 1   MWIVFEGVDTSGKSTQINLLKPLFPKAIFSL----EPGGTALGEHLRQAALH---GAFCA 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + + ++F A R  H+E VI+P     K++  DR L S  AY       +H +   L    
Sbjct: 54  QTQFLLFLADRALHLEEVIKPN--AHKLIFSDRSLVSGLAYSSY--GLEHAW--ELHRAH 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150
             +V+PD  ++  L       R+Q +
Sbjct: 108 GLDVLPDMVLLFKLNAHTLEMRLQAK 133


>gi|257459649|ref|ZP_05624758.1| thymidylate kinase [Campylobacter gracilis RM3268]
 gi|257443074|gb|EEV18208.1| thymidylate kinase [Campylobacter gracilis RM3268]
          Length = 208

 Score = 58.2 bits (139), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 27/183 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-------- 56
           +++ FEGI+G GK+T I+ L     +      VT+EPGGT   EA R ++L         
Sbjct: 1   MYVIFEGIDGVGKSTQIARLAAAFPQ----AIVTKEPGGTKLGEAVRSLVLGEDFKWRRG 56

Query: 57  -------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
                  CG  E    AE ++F A R +H E VI+     G ++L DR   S  AY    
Sbjct: 57  SVNLREVCG--EISKRAELLLFLADRAEHYERVIKGG--AGGLVLSDRGFISGLAYALAN 112

Query: 110 DSSQHLF-LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS--LRESACLDYFER-K 165
           D    +  L +L + ++     D  ++      +   R++ R S  + E+  L Y  R +
Sbjct: 113 DEGADISELIALNKFALGGKFADKIVLFSADEQLIRHRLKTRASSDIIEARGLKYLMRVQ 172

Query: 166 DVM 168
           D+M
Sbjct: 173 DLM 175


>gi|164688846|ref|ZP_02212874.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM
           16795]
 gi|164602050|gb|EDQ95515.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM
           16795]
          Length = 224

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 15/159 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T    L   L+ +NY +     P     + A   + L     +FG
Sbjct: 3   GKLIIIEGSDGSGKATQTKKLYDRLEAENYKIKKVEFPNYNSESSALVKMYLRG---DFG 59

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114
             A  +        +A  R    +         G I++CDR+  S+  +Q  +  +S + 
Sbjct: 60  KNATDVDPYVCSTFYAVDRYASFKTGWEEFYNNGGIIICDRYTTSNMVHQASKIDESERD 119

Query: 115 LFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNR 150
            +LD L   E ++ ++  PDC I LD+PV++    +Q+R
Sbjct: 120 KYLDWLNDLEFNLYKIPKPDCVIFLDVPVEVSKSLMQDR 158


>gi|185177554|pdb|2PLR|A Chain A, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus
           Tokodaii Strain7
 gi|185177555|pdb|2PLR|B Chain B, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus
           Tokodaii Strain7
          Length = 213

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 16/148 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSC 57
             G+ I+FEGI+G+GK++  +LLK +++ K  DV++T             EA +  LL+ 
Sbjct: 2   KKGVLIAFEGIDGSGKSSQATLLKDWIELKR-DVYLTEWNSSDWIHDIIKEAKKKDLLT- 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                     +++ A    D  E  I P L  G I++ DR++ ++YA    RDS + + +
Sbjct: 60  ------PLTFSLIHATDFSDRYERYILPXLKSGFIVISDRYIYTAYA----RDSVRGVDI 109

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLK 145
           D ++++    + PD T  + +  DI L+
Sbjct: 110 DWVKKLYSFAIKPDITFYIRVSPDIALE 137


>gi|222445925|ref|ZP_03608440.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435490|gb|EEE42655.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii
           DSM 2375]
          Length = 192

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62
           ++I FEGI+GAGK+T I+LLK +L++  +DV    EP  +   +  R +L       D  
Sbjct: 1   MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ 106
             +   ++FAA R+     +I   L  + K++L DR   SS AYQ
Sbjct: 61  -QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ 99


>gi|261349531|ref|ZP_05974948.1| dTMP kinase [Methanobrevibacter smithii DSM 2374]
 gi|288861895|gb|EFC94193.1| dTMP kinase [Methanobrevibacter smithii DSM 2374]
          Length = 192

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62
           ++I FEGI+GAGK+T I+LLK +L++  +DV    EP  +   +  R +L       D  
Sbjct: 1   MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ 106
             +   ++FAA R+     +I   L  + K++L DR   SS AYQ
Sbjct: 61  -QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ 99


>gi|223996301|ref|XP_002287824.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976940|gb|EED95267.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 276

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 20/222 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++  GKTT +SLL + L   +      R P  +    +  +  L+       
Sbjct: 36  GAFILLEGVDRCGKTTQVSLLVKHLLSLSLATVAYRFPDRSTQVGSLINSYLTSSTPTAP 95

Query: 64  AEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERD----SSQH 114
            +  AI  +F+A R +   ++ R  L  G  ++CDR+  S  A+     E D    S   
Sbjct: 96  LDDRAIHLLFSANRWEASTSLAR-TLASGTNIVCDRYAYSGVAFTSAKVEEDRGSMSGGE 154

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           L L+      V    PDC I LDL  D   KR    Y        + +E++D+ +  ++R
Sbjct: 155 LGLEWCIAPDVGLPAPDCVIFLDLEQDEAEKR--GGYG------GERYEKRDLQMRVRKR 206

Query: 175 QIFLDIARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQK 214
              L     Q  R   H+VD++ S + V   +++IV + +++
Sbjct: 207 FAELQSLDEQNGRVPWHVVDASQSIEEVTGELVSIVNDTIER 248


>gi|291533518|emb|CBL06631.1| thymidylate kinase [Megamonas hypermegale ART12/1]
          Length = 224

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 10/160 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LS 56
           M  G  I  E  +G GK T   LL   L +  Y V     P   +PA    +  L     
Sbjct: 1   MVKGKLIIIEAGDGCGKATQTKLLYDRLNQAGYKVKKVEYPDYESPACTPVKMYLQGEFG 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQ 113
             VD+  A A +++FA  R        +    EG I+L DR+  S+  +Q    E    +
Sbjct: 61  GHVDDVNAYAASVLFAVDRYASYRMKWKKDYEEGTIILADRYTTSNMVHQAVKIEDSKMR 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
             FL  L +    ++   +PD  I L++P DI  K + NR
Sbjct: 121 DEFLSWLWDTEFTKMGLPVPDKVIFLNMPPDISNKLIDNR 160


>gi|222823749|ref|YP_002575323.1| thymidylate kinase [Campylobacter lari RM2100]
 gi|254808285|sp|B9KG87|KTHY_CAMLR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|222538971|gb|ACM64072.1| thymidylate kinase [Campylobacter lari RM2100]
          Length = 194

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 8/114 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+FEG++  GK+T I LLK+  +    D   T+EPGG+      R +LL   + +F  
Sbjct: 1   MYIAFEGVDCVGKSTQIELLKKCFK----DAIFTKEPGGSELGVHLRKILLESKM-QFSK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +AE ++F A R + ++  I     + K+++ DR   S+ AY  + D  Q++  D
Sbjct: 56  KAELLLFLADRANLID--IHLVQNKNKLIISDRSFVSNMAY-AKFDFDQNILFD 106


>gi|148642580|ref|YP_001273093.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061]
 gi|166987705|sp|A5UKJ7|KTHY_METS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|148551597|gb|ABQ86725.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061]
          Length = 192

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 9/105 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62
           ++I FEGI+GAGK+T I+LLK +L +  +DV    EP  +   +  R +L       D  
Sbjct: 1   MYIVFEGIDGAGKSTQINLLKDWLDQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ 106
             +   ++FAA R+     +I   L  + K++L DR   SS AYQ
Sbjct: 61  -QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ 99


>gi|255527280|ref|ZP_05394160.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|296188361|ref|ZP_06856753.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7]
 gi|255509018|gb|EET85378.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|296047487|gb|EFG86929.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7]
          Length = 241

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 16/163 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+ I  EG +G+GK T   +L   L  +NY V     P     + A   + L+    
Sbjct: 1   MNRGIVIVVEGCDGSGKATQTQILYEKLLSENYKVKKIEYPNYKSDSSALVKMYLN---G 57

Query: 61  EFGAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS- 112
           +FG+  E       +  +A  R    +   +     G I+L DR+  ++  +Q  +  + 
Sbjct: 58  DFGSNPEDVNPYVSSTFYAVDRFASYKTEWKDFYESGGIVLADRYTTANMVHQASKIKNV 117

Query: 113 --QHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
             +  FLD L +   +     +PDC + LD+P +   K ++ R
Sbjct: 118 QEKSKFLDWLWDFEFRIFGLPVPDCVMFLDMPPEYSRKLMKER 160


>gi|315638103|ref|ZP_07893288.1| thymidylate kinase [Campylobacter upsaliensis JV21]
 gi|315481951|gb|EFU72570.1| thymidylate kinase [Campylobacter upsaliensis JV21]
          Length = 193

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 10/132 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+  GK+T I LLK   +    D   T EPG T   E  R +LL+       +
Sbjct: 1   MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEHLRELLLNRPY-PISS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R  H E ++R    E K+++ DR + S  AY    D      L SL + +
Sbjct: 56  KAELLLFLADRNQHYEEILREN--EQKLIISDRSIISGMAYAKNFDLD---ILFSLNDFA 110

Query: 125 VQEVMPDCTIIL 136
           +    P   I L
Sbjct: 111 LNGFFPQKAIFL 122


>gi|296122456|ref|YP_003630234.1| thymidylate kinase [Planctomyces limnophilus DSM 3776]
 gi|296014796|gb|ADG68035.1| thymidylate kinase [Planctomyces limnophilus DSM 3776]
          Length = 236

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 12/146 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SGL I  EGI+GAGK T   LL   L+  + DV     P         R      G   
Sbjct: 10  SSGLLIVIEGIDGAGKGTQTKLLHERLKSTSRDVFTLSFPRYESTFFGQRVADFLNG--R 67

Query: 62  FGAEAEAIVFAAARL---DHVE--NVIRPALMEGKILLCDRFLDSSYAY-----QGERDS 111
           FG   +   F AA L   D  E  ++++ AL EGKI+LCDR++ S+ A+     Q E  +
Sbjct: 68  FGTLEQVHPFLAAMLYAGDRFESRDLLQSALNEGKIVLCDRYIPSNLAHQLTKAQPELRA 127

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILD 137
               +++ ++    Q   PD  ++LD
Sbjct: 128 EMQQWIEHVEYHLYQMPRPDLVVLLD 153


>gi|320537300|ref|ZP_08037256.1| thymidylate kinase [Treponema phagedenis F0421]
 gi|320145870|gb|EFW37530.1| thymidylate kinase [Treponema phagedenis F0421]
          Length = 214

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 27/217 (12%)

Query: 6   FISFEGIEGAGKTTHISLLK-RFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           FI FEGI+G G T+ + LL+ RF    K   V  T+EP  T   +  R  L      E  
Sbjct: 11  FIVFEGIDGTGTTSQLRLLRERFASIGKAEKVVFTQEPTDTEIGKLIRKAL----SKELS 66

Query: 64  AEAEAI--VFAAARLDHVENVIRPALME----GKILLCDRFLDSSYAYQGERDSSQHLFL 117
            E + I  +FAA R +H+       ++E    GK +  DR+  SS AYQG   S      
Sbjct: 67  LEQKTIAQLFAADRTEHIYG--NAGIIEHTANGKAVFSDRYFFSSLAYQGL--SVGKSLA 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--VMIHEKRRQ 175
             L E      +P+     D+PV   + R+  R   +E      +E+KD    + ++  +
Sbjct: 123 KKLNE---DFPLPELLFFFDIPVQTSMSRIDKRGLQKE-----IYEKKDFQTAVRQEYLR 174

Query: 176 IFLDIARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
           I  +  ++ P+   I +D+    Q +   I + V  L
Sbjct: 175 IIEEYEKSAPEMQIIRIDAEKDIQEIHQKIWSFVENL 211


>gi|242238410|ref|YP_002986591.1| thymidylate kinase [Dickeya dadantii Ech703]
 gi|242130467|gb|ACS84769.1| thymidylate kinase [Dickeya dadantii Ech703]
          Length = 223

 Score = 56.2 bits (134), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 34/166 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT------PAAEAA----- 50
           N G FI+FEG +GAGK+T        + R  YD  VT  P  T      P  E+      
Sbjct: 3   NKGFFIAFEGNDGAGKST--------VSRDIYDSIVTIYPNTTFLDKNHPVLESGYGMYH 54

Query: 51  ----RHVL----LSCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLD 100
               R +L    +S  +DE G     ++ ++  A LD+   +I+PAL EGKI++ D +  
Sbjct: 55  MGKIREILWDYDISAPLDELGDSHWLLLLSSWFAALDY--GIIKPALNEGKIIISDGWF- 111

Query: 101 SSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
             Y Y         +  +   E+      PD TI LD+   +   R
Sbjct: 112 --YKYIARFSLKNDIMRNIANEVFNLSTEPDLTIYLDVTPRVAATR 155


>gi|327353237|gb|EGE82094.1| thymidylate kinase [Ajellomyces dermatitidis ATCC 18188]
          Length = 225

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 16/205 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ AGK+T  ++L++ LQ   ++V   R P  T       +  L  G    
Sbjct: 5   GGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTHL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A  ++F+A R +     I+  +  G  ++ DR+  S   Y   +D  + L LD   +
Sbjct: 64  DDHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKDIPE-LSLDWAWQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-I 180
             +    PD  + L++  +   KR    Y L         ER +    + R RQ+F   I
Sbjct: 122 PEIGLPQPDIWLFLNISPEEAAKR--GGYGL---------ERYENDTFQSRIRQLFQTLI 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           AR  PD  HI+D+  + + VA +++
Sbjct: 171 AREDPDNVHIIDAGRTEREVALDVI 195


>gi|307150937|ref|YP_003886321.1| thymidylate kinase [Cyanothece sp. PCC 7822]
 gi|306981165|gb|ADN13046.1| thymidylate kinase [Cyanothece sp. PCC 7822]
          Length = 207

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 18/177 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG----GTPAAEAARHVLLS 56
           MN  LFI  EGI+G+G +T  +LLK +  +K     ++ EP     G    EA +  ++ 
Sbjct: 1   MNK-LFIVLEGIDGSGTSTQATLLKDYFIQKGDKAVISPEPTNGVIGKMIREAMQKPIIL 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
               +   +  A +FAA R  H+ N    +   + +G  L+  R+  SS AY       +
Sbjct: 60  MEDKQSFDQQMAYLFAADRHYHLYNDLDGVFKLIQDGSHLITTRYYFSSLAYNC-HTPEE 118

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             F+  L E   +   PD  I +D+PV++ L+R+Q R        +D +E  + +I 
Sbjct: 119 FKFVRQLNE---RFPNPDLVIYIDIPVEVSLERLQER------TIIDVYENSEKLIQ 166


>gi|82492135|gb|ABB77932.1| thymidylate kinase [Environmental halophage 1 AAJ-2005]
          Length = 192

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 24/196 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++ +GKTT    L+       Y    TREP  T        V  S   +    
Sbjct: 1   MLVTLEGLDESGKTTVTEALRSQFPDATY----TREPTETWNGSV---VNKSVETEHEEP 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHL--FLDSL 120
            AE  ++ A    H+   IRPAL +GK+++ DR+ DS  AYQG    D   H   ++  +
Sbjct: 54  VAELFMYTADHATHLSETIRPALNQGKLVISDRYTDSRCAYQGATLEDEFAHPMEYIRGI 113

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                +E  PD T+ LD+  +    R +    +  +  L            K R+ +  +
Sbjct: 114 HGEFTRE--PDLTLYLDIDAETAASREKAAKGVDRTEYLS-----------KVRENYERL 160

Query: 181 ARNQPDRCHIVDSAHS 196
               PDR   +D+  S
Sbjct: 161 IATHPDRFVRIDATQS 176


>gi|146304784|ref|YP_001192100.1| thymidylate kinase [Metallosphaera sedula DSM 5348]
 gi|172046954|sp|A4YIC4|KTHY_METS5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|145703034|gb|ABP96176.1| thymidylate kinase [Metallosphaera sedula DSM 5348]
          Length = 196

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 34/220 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +  EGI+ +GKTT    L   L  + + V +T+EP      +          V      
Sbjct: 3   LVVIEGIDASGKTTLAKRLAESLSPR-FKVLLTQEPFTDDIKQLLEKYQWKDQV------ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK---ILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A++F+A R  HV+       ME +   +++ DR+  S+ AYQG        +L+SL  
Sbjct: 56  LLALLFSADRRIHVK------WMESQNVDLIISDRYFFSTLAYQGV--GVDRTWLESLSS 107

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I     +P+ TI+LD+PV++ L+R++N+   R+S  LD FE K   +H+ R   +L +AR
Sbjct: 108 IFP---LPNLTILLDVPVNVALERLRNK---RDS--LD-FEEKRKSLHQVREN-YLSLAR 157

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
                  I+D     + + +    I  ELVQ  +S  +S+
Sbjct: 158 RY--NFKILDGTLPLEKLTS----ISLELVQGLLSSSTSR 191


>gi|253988332|ref|YP_003039688.1| thymidylate kinase-like protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779782|emb|CAQ82943.1| similarities with thymidylate kinase [Photorhabdus asymbiotica]
          Length = 223

 Score = 55.8 bits (133), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 45/215 (20%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAARH-- 52
           GLFI+FEG +GAGK+T        + R+ YD         V + +     P+  +  H  
Sbjct: 5   GLFIAFEGNDGAGKST--------ISREVYDILSLDYNNIVFLDKNYPLLPSGYSMYHMG 56

Query: 53  ----VL----LSCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSS 102
               VL    +S  + E G     ++ A+  A LD +  +I+P+L++GKI++CD +    
Sbjct: 57  KIRDVLWDYDISAPLGELGDRHWILLIASWFAVLDSL--IIQPSLLQGKIIICDSWYYKY 114

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            A    + +      +S+  I+ +   PD  I LD+P DI  KR +      ES  L+  
Sbjct: 115 LARFLLKSTELAELSNSVLSINTK---PDMVIYLDVPPDIAEKR-KKMLKPSESGKLEKN 170

Query: 163 ERKDVMIHEK----RRQIFLDIARNQPDRCHIVDS 193
           E+ D + ++K    + Q F D      D   I+D+
Sbjct: 171 EKYDFIEYQKHVLNQYQTFYD------DTWKIIDT 199


>gi|57506107|ref|ZP_00372029.1| thymidylate kinase [Campylobacter upsaliensis RM3195]
 gi|57015591|gb|EAL52383.1| thymidylate kinase [Campylobacter upsaliensis RM3195]
          Length = 193

 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 10/132 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+  GK+T I LLK   +    D   T EPG T   E  R +LL+       +
Sbjct: 1   MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEYLRELLLNRPY-PISS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R  H E ++R    E K+++ DR + S  AY    D      L +L + +
Sbjct: 56  KAELLLFLADRNQHYEEILREN--EQKLIISDRSIISGMAYAKNFDLD---ILFTLNDFA 110

Query: 125 VQEVMPDCTIIL 136
           +    P   I L
Sbjct: 111 LNGFFPQKAIFL 122


>gi|160933042|ref|ZP_02080431.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753]
 gi|156868116|gb|EDO61488.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753]
          Length = 222

 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 15/164 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++G+GK T   LL ++L+ +   V     P     + A   + L+    
Sbjct: 1   MARGKLIVMEGLDGSGKATQTGLLCQYLESRGRRVRHIEFPDYREPSSALVKMYLN---K 57

Query: 61  EFG-------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109
           EFG       A A +  +A  R        R   + G  ++ DR+  S+  YQ E+    
Sbjct: 58  EFGSNPGDVNAYAASSFYAVDRYASFLRFWRKDYLSGATIVADRYTTSNAVYQMEKTPRE 117

Query: 110 DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           D +++L +L   +   +Q   PD  + LD+P +I  + +  RY+
Sbjct: 118 DWNKYLAWLQDYEYGKLQLPRPDLVLFLDMPTEISQRLLSGRYA 161


>gi|124027289|ref|YP_001012609.1| thymidylate kinase [Hyperthermus butylicus DSM 5456]
 gi|123977983|gb|ABM80264.1| Thymidylate kinase [Hyperthermus butylicus DSM 5456]
          Length = 223

 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 13/160 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +++ FEGI+GAG TTH  LL   L+   Y V +  EP         RH+L      
Sbjct: 1   MARPVYVVFEGIDGAGTTTHARLLAEKLRLLGYCVELVEEPSKDVVGGVIRHMLRH---G 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPAL---MEGK--ILLCDRFLDSSYAYQGERDSSQHL 115
            F  +  A++FAA RL     +++ +L   ++G+  I++ DR   SS AYQ        +
Sbjct: 58  PFHQDVLALLFAADRL-----LLQRSLEERLQGRSCIVVSDRSWISSLAYQTCELFPYAV 112

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
             D +  ++     PD  + +D+   I  +R+ +R  +RE
Sbjct: 113 DADWVYIVNKYAWRPDILVYIDVEPLIAFRRLASRGRVRE 152


>gi|302530810|ref|ZP_07283152.1| predicted protein [Streptomyces sp. AA4]
 gi|302439705|gb|EFL11521.1| predicted protein [Streptomyces sp. AA4]
          Length = 716

 Score = 55.5 bits (132), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 10/138 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I+ EG          + L R+L      V +T +P    A    R   L       
Sbjct: 475 NGFLIAIEGTTAVNTAEQAARLARWLGTGTRPVVLTADP----ALGEQRFRTLVSDAALT 530

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS---SYAYQGERDSSQHLFLDS 119
           G  A+A+V AA R + VE  I+PAL  G +++ +RF+DS   S +  GE D  +   L+ 
Sbjct: 531 GVRAQALVAAAVRAELVERQIQPALDAGSVVVMERFVDSPLASLSAAGELDRDE---LEG 587

Query: 120 LQEISVQEVMPDCTIILD 137
           L + +   + PD T++LD
Sbjct: 588 LVDWATGRLRPDLTVLLD 605


>gi|70606679|ref|YP_255549.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
 gi|76363220|sp|Q4JAC4|KTHY_SULAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|68567327|gb|AAY80256.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
          Length = 194

 Score = 55.1 bits (131), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 32/216 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK---NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             ISFEGI+G+GKTT   ++   L  +   N  + +T EP      +          ++E
Sbjct: 2   FIISFEGIDGSGKTTISKIIYEKLLIEIGSNKKIILTSEPFSQEIIKL---------IEE 52

Query: 62  FGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G +   + A++F A R  H+  + +      +I++ DR++DS+ AYQ    SS  +  +
Sbjct: 53  IGWKDPISLALLFTADRAYHLNLLFK---QNPEIIIMDRYIDSTIAYQ----SSLGIDEN 105

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIF 177
            ++ ++     PD TI+LDL  +  + R++N+        +D F   + +    K R+ +
Sbjct: 106 WIRNLNKYFPEPDLTILLDLKPETAIARIKNK--------VDKFNFDEKISTLSKVREKY 157

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           L++A+   ++  IV++  S   +     +IV+  + 
Sbjct: 158 LELAKRN-NKIRIVNAEKSIDEIVEETWSIVYSFLN 192


>gi|305432214|ref|ZP_07401378.1| thymidylate kinase [Campylobacter coli JV20]
 gi|304444757|gb|EFM37406.1| thymidylate kinase [Campylobacter coli JV20]
          Length = 192

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEG++  GK+T ISLLK   +   +    T EPGGT      R +LL     +   
Sbjct: 1   MYVVFEGVDCVGKSTQISLLKECFKEAVF----TAEPGGTKLGNHLRELLLYKPY-QLDK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E ++F A R  H E +++    + K+++ DR   S  AY  + ++ +   L  L   +
Sbjct: 56  KTELLLFLADRAQHCEEILKAN--QDKLIISDRSFISGMAYAKDFENEE---LFRLNAFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYF 162
           ++   P   I L    ++  +R+ Q      E   +DYF
Sbjct: 111 LENFFPQKVIFLKGDENLIKERLSQKEQDAIEKRGIDYF 149


>gi|229578187|ref|YP_002836585.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|229583122|ref|YP_002841521.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
 gi|228008901|gb|ACP44663.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|228013838|gb|ACP49599.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
          Length = 213

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 74/142 (52%), Gaps = 8/142 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL I+FEGI+G+GK++H  LLK +++ +  DV++T         +  +    +   +   
Sbjct: 3   GLLIAFEGIDGSGKSSHAVLLKDWIEMRR-DVYLTEWNSSDWIHDIIKE---AKKKNTLT 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ A    D  E  I P L  G +++CDR++ ++YA    RD  +++  + ++++
Sbjct: 59  PTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKKL 114

Query: 124 SVQEVMPDCTIILDLPVDIGLK 145
               + P+ T  + +  ++ L+
Sbjct: 115 YSFAIKPNFTFYIRVTPEVALE 136


>gi|269962033|ref|ZP_06176387.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833117|gb|EEZ87222.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 127

 Score = 55.1 bits (131), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 7/123 (5%)

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           +I+PAL   + ++ DR   SS AYQG         + +L++ ++ E  P  T+ +D+   
Sbjct: 1   MIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDTTLGEFKPAFTLYMDIDPR 60

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201
           +GL+R + R        LD  E+ D+   E+ R+ +L +A N  D   ++++  S + VA
Sbjct: 61  VGLERARGR------GELDRIEKMDISFFERTRERYLALA-NADDSIVVINAEQSIEEVA 113

Query: 202 TNI 204
            +I
Sbjct: 114 QDI 116


>gi|39939038|ref|NP_950804.1| hypothetical protein PAM_552 [Onion yellows phytoplasma OY-M]
 gi|39722147|dbj|BAD04637.1| hypothetical protein [Onion yellows phytoplasma OY-M]
          Length = 138

 Score = 54.7 bits (130), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 13/136 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKTT I  +++ L+++  +V   +  G +   +  R + L+       A+
Sbjct: 3   LIVFEGLDGSGKTTLIQKVRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT------NAQ 56

Query: 66  AEAI---VFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120
            + +   + + A +  + E  I+P L   KI+L DR+L S++AYQ   R+  ++  L +L
Sbjct: 57  LKPLTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNYQLFNL 116

Query: 121 QEISVQEVMPDCTIIL 136
             ++ Q + PD T+ +
Sbjct: 117 --LNKQFIKPDMTLFI 130


>gi|298246531|ref|ZP_06970337.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297554012|gb|EFH87877.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 260

 Score = 54.7 bits (130), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 12/147 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--F 62
           LFI  EGI+G+GK+T I+LL+++L  + Y V  + E   +P  +       S G  +   
Sbjct: 13  LFI-VEGIDGSGKSTQIALLRQWLISQGYSVFFS-EWNSSPLVKQT----TSRGKKKQIL 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                +++ A    D  E+ I P L  G I+L DR++ +++A    RD+++ +    ++E
Sbjct: 67  TPTTFSLIHATDFADRTEHDIIPPLKAGAIVLADRYIYTAFA----RDAARGVNRTWVRE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQN 149
           +    V P       +P+ + L+R+ N
Sbjct: 123 LYRFAVQPTLAFYYRVPLSLSLRRIMN 149


>gi|67925004|ref|ZP_00518388.1| Thymidylate kinase [Crocosphaera watsonii WH 8501]
 gi|67853148|gb|EAM48523.1| Thymidylate kinase [Crocosphaera watsonii WH 8501]
          Length = 208

 Score = 54.7 bits (130), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG----GTPAAEAARHVLLSCGVD 60
           LFI  EGI+ AGKTT   LLK +L ++N    ++ EP     G    +A ++ +      
Sbjct: 4   LFIVLEGIDKAGKTTQAELLKHYLIKQNNSAIISSEPTEGVIGKLIRKAMQNPVFVMKDK 63

Query: 61  EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   +  A +FAA R  H+ N    V +    +   ++  R+  SS AY           
Sbjct: 64  EKFDQQMAYLFAADRHYHLYNEVDGVYKLIKQDHCHVIATRYYFSSLAYNTNNQEE---- 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148
            D +  ++ +   PD  I LD+P+D+ L R++
Sbjct: 120 FDFVYGLNKRFPNPDVVIYLDIPLDVALCRLE 151


>gi|261202488|ref|XP_002628458.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
 gi|239590555|gb|EEQ73136.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
 gi|239612282|gb|EEQ89269.1| thymidylate kinase [Ajellomyces dermatitidis ER-3]
          Length = 232

 Score = 54.7 bits (130), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 16/204 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T  ++L++ LQ   ++V   R P  T       +  L  G     
Sbjct: 13  GALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTHLD 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     I+  +  G  ++ DR+  S   Y   +D    L LD   + 
Sbjct: 72  DHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKDIP-GLSLDWAWQP 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181
            +    PD  + L++  +   KR    Y L         ER +    + R RQ+F   IA
Sbjct: 130 EIGLPQPDIWLFLNISPEEAAKR--GGYGL---------ERYENDTFQSRIRQLFQTLIA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205
           R  PD  HI+D+  + + VA +++
Sbjct: 179 REDPDNVHIIDAGRTEREVALDVI 202


>gi|298246530|ref|ZP_06970336.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297554011|gb|EFH87876.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 262

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 19/153 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-- 61
           G  I  EG +G G+TT + LL+ +L+   Y V  T         E  R VL   G+ +  
Sbjct: 54  GRLIVIEGTDGVGRTTQLRLLRPWLESLGYAVADT---------EFTRSVLAGDGIKQAK 104

Query: 62  ----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                G     + +A   +D +E+++ PAL  G I+L DR++ +  A    R ++ H +L
Sbjct: 105 AGHTLGPITMHLFYATDFVDRLESLVLPALRAGFIVLIDRYIYTLMARAMVRGANPH-WL 163

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            S+  ++++   P+    L++ +D  + RV  R
Sbjct: 164 RSIYSLALK---PNAIFYLNIGIDDLIPRVLQR 193


>gi|332181321|gb|AEE17009.1| Thymidylate kinase [Treponema brennaborense DSM 12168]
          Length = 208

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 12/205 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G+G +T I+LLK  L   N     T EP         R +L   G +     
Sbjct: 6   FIVFEGIDGSGTSTQIALLKNKL--PNPGTLFTAEPTSLATGRFLRTLLR--GDERLTPG 61

Query: 66  AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A +FAA R +HV  ++ I     +G I++ DR+  SS AYQ     S     +   ++
Sbjct: 62  TMAYLFAADRYEHVHAQDGILQTCADGGIVVSDRYFFSSLAYQ-----SAECGRELPAKL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    +P+     D+   + L R+  R S+ E      F  K    +E+    +   A  
Sbjct: 117 NESFPLPEYLFYFDIEPSVSLNRITGR-SVTEIYEKREFLEKTAAEYERIIGEYEKTAVG 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
              +   +D++ S   V+ NI +I+
Sbjct: 176 TGMKITRLDASESVAEVSENIWSIL 200


>gi|312128607|ref|YP_003993481.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778626|gb|ADQ08112.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 240

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62
           G  I  EG + +G++T I LLK +L+   Y V  T    G   +     V+      +  
Sbjct: 22  GKLIVIEGPDCSGRSTQIELLKEWLEASGYAVLNT----GLKRSRLVGDVIERAKKGNTL 77

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G    ++++     D +EN I PAL  G ++L DR++ +  A    RD  +    + L+ 
Sbjct: 78  GKTTLSLLYCCDFADQLENQIIPALSAGYVVLADRYIFTLMA----RDIVRGADKEWLKR 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +    ++PD  I LD+ +DI L R   +Y       LDY+E
Sbjct: 134 LLGFAIVPDLIIYLDVSIDILLTRTFQKY-----GHLDYWE 169


>gi|172036089|ref|YP_001802590.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142]
 gi|171697543|gb|ACB50524.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142]
          Length = 208

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 14/154 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI  EGI+ AGKTT    LKR+L  +     ++ EP      E  R  + S  V +   
Sbjct: 4   LFIVLEGIDKAGKTTQAERLKRYLINQGDSAIISSEPTEGVIGELIRKAMQSP-VFKIND 62

Query: 65  EAE-----AIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           +A+     A +FAA R  H+ N    V +    +   ++  R+  SS AY    +S+   
Sbjct: 63  KAKFDQQMAYLFAADRHYHLYNEVDGVYKLIQQDHYHVIATRYYFSSLAY----NSNNQE 118

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
             + +  ++ +   PD  I LD+P+DI L R++N
Sbjct: 119 EFNFVYGLNKRFPNPDLVIYLDIPLDIALSRLEN 152


>gi|28209987|ref|NP_780931.1| thymidylate kinase [Clostridium tetani E88]
 gi|28202422|gb|AAO34868.1| thymidylate kinase [Clostridium tetani E88]
          Length = 228

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 29/213 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  E  +G+GK T    L   L    YDV     P     + A   + LS    EFG
Sbjct: 6   GKLIVIEAPDGSGKATQTKKLYNKLVEDKYDVLKVEYPDYNSNSSALIKMYLSG---EFG 62

Query: 64  -------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
                  A A +  FA  R    +         G I+L DR+  S+  +Q  +  +   +
Sbjct: 63  DKPNDVNAYAASTFFAVDRFASFKKKWGAFYENGGIILADRYTTSNMVHQASKIKNVEEK 122

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FLD L ++    +   +PD TI LDLP +     ++NR +          E KD  IH
Sbjct: 123 KKFLDWLWDLEFNLMGLPIPDATIFLDLPPEYSRNLIKNRKNKFTGE-----EEKD--IH 175

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
           E R + +L+I+       + VD A  +  +  N
Sbjct: 176 E-RDEDYLNISYK-----NAVDIAEKYNWIKIN 202


>gi|225018256|ref|ZP_03707448.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum
           DSM 5476]
 gi|224948953|gb|EEG30162.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum
           DSM 5476]
          Length = 205

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEG++G+GK T I LL    +R+      T EP  +    A R   L+       AE
Sbjct: 4   FIVFEGLDGSGKGTQIRLLCEEFKRRGEAFQQTAEPTFSVTGGAIRDA-LNGNHPRHPAE 62

Query: 66  AEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A+ F   R+ H     + I   L +GK ++CDR+  SS+AYQG     Q +   +L  
Sbjct: 63  LAAL-FLTDRIYHNTGKFDGIELLLSQGKHVICDRYYYSSFAYQGTGCDMQWVMEMNLNC 121

Query: 123 ISVQEVMPDCTIILDL 138
            ++++  PD  I LD+
Sbjct: 122 PNIRK--PDLCIYLDV 135


>gi|154308900|ref|XP_001553785.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10]
 gi|150852604|gb|EDN27796.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10]
          Length = 242

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 8/161 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G FI  EG++ AGKTT +  L   L     +V + R P  T A     +  L     
Sbjct: 18  ISRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDRTTAIGQQINSYLQSST- 76

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117
               ++  ++F+A R +  +  IR  + +G  ++CDR+  S   Y   +   DS  HL L
Sbjct: 77  ALPDQSIHLLFSANRWEKAQE-IRDLIAQGYTIVCDRYYYSGMIYTSSKYSIDSPNHLSL 135

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRE 155
           +  +   +   MPD  I LDL  +   KR      +Y  RE
Sbjct: 136 EWCKNPEIGLPMPDRVIFLDLEPEEAEKRGGYGDEKYETRE 176


>gi|310799971|gb|EFQ34864.1| thymidylate kinase [Glomerella graminicola M1.001]
          Length = 271

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 3/143 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG++ +GKTT + LL++        V V R P  T          L   V E  
Sbjct: 40  GAFIAFEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRTTPIGQMIDAYLKSSV-EME 98

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R + V+N I+  L  G  ++CDR+  S   Y   + +  HL L   ++ 
Sbjct: 99  DHVIHLLFSANRWEAVKN-IQTLLASGTTVICDRYYHSGIVYSAAKQNP-HLTLHWARQP 156

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            +    PD  + LDL   I  +R
Sbjct: 157 ELGLPRPDLVLFLDLEEAIARER 179


>gi|160902557|ref|YP_001568138.1| thymidylate kinase [Petrotoga mobilis SJ95]
 gi|160360201|gb|ABX31815.1| thymidylate kinase [Petrotoga mobilis SJ95]
          Length = 232

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 17/164 (10%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G+ I  E G + +GK T   +L + L+ +    +    P     + A   + L    
Sbjct: 1   MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKG-- 58

Query: 60  DEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ER 109
            EFG   EAI        FA  R    +  ++P    G IL+ DR+  S+  YQ    E 
Sbjct: 59  -EFGENPEAINPYAASTFFAVDRFATYQKELKPLYESGGILISDRYTTSNMIYQSSKFEN 117

Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
            S +  FL+ L ++   +     P+  I LD+P  I ++ ++ R
Sbjct: 118 QSEKDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRKR 161


>gi|294979332|pdb|2WWF|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Tmp And Adp
 gi|294979333|pdb|2WWF|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Tmp And Adp
 gi|294979334|pdb|2WWF|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Tmp And Adp
 gi|294979335|pdb|2WWG|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Dgmp And Adp
 gi|294979336|pdb|2WWG|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Dgmp And Adp
 gi|294979337|pdb|2WWG|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Dgmp And Adp
 gi|294979338|pdb|2WWH|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Ap5dt
 gi|294979339|pdb|2WWH|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Ap5dt
 gi|294979340|pdb|2WWH|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Ap5dt
 gi|294979341|pdb|2WWI|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Aztmp And Adp
 gi|294979342|pdb|2WWI|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Aztmp And Adp
 gi|294979343|pdb|2WWI|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Aztmp And Adp
          Length = 212

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 17/149 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV--- 59
           G FI FEG++ +GK+T   LL  +L+  N +V H+       P  E     ++S  +   
Sbjct: 10  GKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLY-----FPNRETGIGQIISKYLKME 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    E   ++F+A R +H+ N I+  L++G  ++CDR     YAY G   SS  L L+ 
Sbjct: 65  NSMSNETIHLLFSANRWEHM-NEIKSLLLKGIWVVCDR-----YAYSGVAYSSGALNLNK 118

Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKR 146
              ++  +  + PD    L++P +    R
Sbjct: 119 TWCMNPDQGLIKPDVVFYLNVPPNYAQNR 147


>gi|312128608|ref|YP_003993482.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778627|gb|ADQ08113.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 249

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G     EG +G+GK+T + LLK++L+   Y V  T       +         +   +   
Sbjct: 17  GRLFVVEGCDGSGKSTQVHLLKKWLEFLGYTVFFTE---WNSSDLVKNATKKAKKKNLLT 73

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ A    D  E +I P L  G I+LCDR++ ++YA    RD ++    + ++ +
Sbjct: 74  PTTFSLLHACDFADRYERLILPHLRAGYIVLCDRYIYTAYA----RDIARGCNPEWVKTV 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV 147
               V P  T    +PVD+ + R+
Sbjct: 130 YDFAVKPTVTFYFKVPVDVAIDRI 153


>gi|124807055|ref|XP_001350897.1| thymidylate kinase, putative [Plasmodium falciparum 3D7]
 gi|23497027|gb|AAN36577.1|AE014852_21 thymidylate kinase, putative [Plasmodium falciparum 3D7]
          Length = 210

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 17/149 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV--- 59
           G FI FEG++ +GK+T   LL  +L+  N +V H+       P  E     ++S  +   
Sbjct: 8   GKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLY-----FPNRETGIGQIISKYLKME 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    E   ++F+A R +H+ N I+  L++G  ++CDR     YAY G   SS  L L+ 
Sbjct: 63  NSMSNETIHLLFSANRWEHM-NEIKSLLLKGIWVVCDR-----YAYSGVAYSSGALNLNK 116

Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKR 146
              ++  +  + PD    L++P +    R
Sbjct: 117 TWCMNPDQGLIKPDVVFYLNVPPNYAQNR 145


>gi|153006218|ref|YP_001380543.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152029791|gb|ABS27559.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 564

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 4/150 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           +F+SFEGI+G+GKT+  + +   L+   + V   RE G  G+  A   R +     + E 
Sbjct: 1   MFVSFEGIDGSGKTSLSNQVCERLRAAGHSVLHAREKGILGSAVARRVRELTRDARLLEM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E  +  A     ++ ++RPAL  G I++ DR L S  A            +++   
Sbjct: 61  SPRTELFLNLARETQQLDEIVRPALAGGGIVVADRSLHSLVALAAAGRGLPREEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           +      PD  +++D  VD  L R++ R  
Sbjct: 121 VGAAGTWPDLVVLVD--VDPDLARLRKRVG 148


>gi|251771464|gb|EES52041.1| thymidylate kinase [Leptospirillum ferrodiazotrophum]
          Length = 226

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 21/184 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62
           GL I+ EG +G+GKTT   LLK +   +   V V+         E  R  +       + 
Sbjct: 9   GLLIAIEGTDGSGKTTQAELLKHYYLSRGVAVVVS----ACNTVELIRKAISDLKQQNYL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                + ++AA  +D  E+ I PAL  G++++ ++++ + ++    R   + +  D +  
Sbjct: 65  DPVTFSFLYAADFVDRFEHQIIPALESGQLVIAEQYVYTVFS----RAILRGIAPDWISN 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE----------RKDVMIHEK 172
           I    ++P  T  LDLPV+  L+R+   +  R+    DY+E          +KD  +  +
Sbjct: 121 IFDFALVPAKTFYLDLPVETLLERLH--WKTRQERFFDYYESGMDMNLSGRKKDSFVIYQ 178

Query: 173 RRQI 176
           RR I
Sbjct: 179 RRLI 182


>gi|254827258|ref|ZP_05231945.1| thymidylate kinase [Listeria monocytogenes FSL N3-165]
 gi|258599640|gb|EEW12965.1| thymidylate kinase [Listeria monocytogenes FSL N3-165]
          Length = 77

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
          +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +E 
Sbjct: 4  IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEM 61


>gi|71394067|gb|AAZ32106.1| thymidilate kinase [uncultured euryarchaeote Alv-FOS5]
          Length = 212

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 6/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            +FI FEGI+ +GK T   LL + L++K + V++   P             L   V E  
Sbjct: 2   NMFIVFEGIDASGKETQAKLLAKALKKKGHKVYMVDFPNYKNPIGKMIKKFLDKKV-ELD 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E  A+++AA R   ++ + + AL + KI++ DR+  S+ AYQG   ++    +  L  +
Sbjct: 61  VETRALLYAADRRYELKGITK-ALDDNKIVIADRYCYSNIAYQGSLGAN----ISWLASL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
               V PD    LD+P    L+R
Sbjct: 116 DATLVFPDLVFYLDIPAKESLRR 138


>gi|206603547|gb|EDZ40027.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG']
          Length = 229

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEF 62
           G  I+ EG +G+GKTT   LLK F + +   V ++  P  T  AE  R  +      +  
Sbjct: 9   GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVLS--PCNT--AELIRGAISKLKERNTL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                  ++AA  +D  E+VI PAL  GK+++ ++++ + +A    R   Q    D +++
Sbjct: 65  DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +    + P  T  LD+  +  L R+Q  +  R+    DY+E
Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYE 159


>gi|124516693|gb|EAY58201.1| Thymidylate kinase [Leptospirillum rubarum]
          Length = 229

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEF 62
           G  I+ EG +G+GKTT   LLK F + +   V ++  P  T  AE  R  +      +  
Sbjct: 9   GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVLS--PCNT--AELIRGAISKLKERNTL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                  ++AA  +D  E+VI PAL  GK+++ ++++ + +A    R   Q    D +++
Sbjct: 65  DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +    + P  T  LD+  +  L R+Q  +  R+    DY+E
Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYE 159


>gi|148264685|ref|YP_001231391.1| thymidylate kinase [Geobacter uraniireducens Rf4]
 gi|146398185|gb|ABQ26818.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 226

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I  EG +G+G++T ++LLK +L+ +    H T + G   +   +  +  +   +  
Sbjct: 17  AGKLIVIEGADGSGRSTQMALLKDYLEGRG---HATVDVGLRRSTLVSEELQEAKQGNVL 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G    ++ +A    D +EN I PAL  G I+L DR++ +  A    RD  +    D ++ 
Sbjct: 74  GEITRSLFYATDFADQLENRIIPALRAGFIVLADRYIYTLMA----RDIVRGADRDWVRS 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +    ++PD  I L +     ++R     + R++A LDY+E
Sbjct: 130 LYGLALVPDLVIYLRVSPSQLVER-----NFRKNATLDYWE 165


>gi|315427436|dbj|BAJ49042.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
 gi|315427468|dbj|BAJ49072.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
          Length = 200

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 25/185 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCGV 59
            +I+ EGI+GAGKTT   LL R L R  + V    EP     GG      A+ V +S   
Sbjct: 4   FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREALAKRVNMS--- 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                E  A++FAA RL   E ++  A   G  ++ DR + SS AYQ    S+     + 
Sbjct: 61  ----EEVLALLFAADRLTLREKIV-SAKQSGVYVVSDRSVVSSLAYQ----SAALGLRNW 111

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHEKRR 174
           + E++   V PD  + +D+  +  LKR++ +    E+     F RK       ++H+ RR
Sbjct: 112 VYEVNRFAVKPDIIVYIDISPETALKRLRKKSQRYENMV---FLRKVKNAYSRVLHDFRR 168

Query: 175 QIFLD 179
            + +D
Sbjct: 169 VVVVD 173


>gi|116330468|ref|YP_800186.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|122281774|sp|Q04UJ2|KTHY_LEPBJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116124157|gb|ABJ75428.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 205

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 5   LFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +F+ FEGI+G+GK+T   SL ++  +R    V+ T EP      +  R  L   G  +  
Sbjct: 7   IFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFT-EPTNFETGKYLRKFL--RGEIDLE 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + +   F   R + +   I P+L  GK +L DR++ S+ AYQ    S   L  +++ E 
Sbjct: 64  RKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQ----SGDDLLPETIIEK 119

Query: 124 SVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           ++++   +PD    LDL   I L+R+  R   +E
Sbjct: 120 NLKKNFKIPDLLFYLDLNPAIALERLSQRKENKE 153


>gi|91203291|emb|CAJ72930.1| similar to thymidylate kinase [Candidatus Kuenenia stuttgartiensis]
          Length = 234

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 14/223 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAE-AARHVLLSCG-V 59
           G  I   GI+G+GKT    LL   L ++ Y V     P  G T  AE  A+++  S G  
Sbjct: 11  GKLIVITGIDGSGKTVQTKLLYERLLKEGYPVATIDFPQYGKTFFAEMVAKYLRGSFGAA 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG------ERDSSQ 113
           D       +I++A  R +  ++ I+  +  GKI++ +R++  + A+QG      E  +  
Sbjct: 71  DAVSPYLASILYAGDRFEK-KDQIQTWIDAGKIIISNRYVCDNMAHQGGKIKNSEERAQF 129

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             +LD L+        P  +I+L +P +I    V+ +      A       ++ M H K 
Sbjct: 130 FQWLDQLEHTVFGIPRPHLSILLYVPAEIAYFLVEKKGQREYLAGAKKDIHEEDMHHMKS 189

Query: 174 RQ-IFLDIARNQPDRCHIVDSAHSFQSVATNIL-NIVWELVQK 214
            Q  F++IA+ +P+    VD   +   +  +++ + +W+ V K
Sbjct: 190 AQETFIEIAKGKPN-WKTVDCTKNNTLLPEHVIADTIWQAVAK 231


>gi|315425277|dbj|BAJ46945.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
          Length = 200

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 25/185 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCGV 59
            +I+ EGI+GAGKTT   LL R L R  + V    EP     GG      A+ V +S   
Sbjct: 4   FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREALAKRVNMS--- 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                E  A++FAA RL   E ++  A   G  ++ DR + SS AYQ    S+     + 
Sbjct: 61  ----EEVLALLFAADRLTLREKIV-SAKQSGVYVVSDRSVVSSLAYQ----SAALGLRNW 111

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHEKRR 174
           + E++   V PD  + +D+  +  LKR++ +    E+     F RK       ++H+ RR
Sbjct: 112 VYEVNRFAVKPDIIVYIDISPETALKRLRKKSQRYENMV---FLRKVKNAYSRVLHDFRR 168

Query: 175 QIFLD 179
            + +D
Sbjct: 169 VVVVD 173


>gi|116328926|ref|YP_798646.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|122283291|sp|Q04YY2|KTHY_LEPBL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116121670|gb|ABJ79713.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 205

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 10/154 (6%)

Query: 5   LFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +F+ FEGI+G+GK+T   SL ++  +R    V+ T EP      +  R  L   G  +  
Sbjct: 7   IFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFT-EPTNFETGKYLRKFL--RGEIDLE 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + +   F   R + +   I P+L  GK +L DR++ S+ AYQ    S   L  +++ E 
Sbjct: 64  RKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQ----SGDDLLPETIIEK 119

Query: 124 SVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           ++++   +PD    LDL   I L+R+  R   +E
Sbjct: 120 NLKKNFKIPDLLFYLDLNPAIALERLSQRKENKE 153


>gi|213029631|ref|ZP_03344078.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
          Typhi str. 404ty]
          Length = 89

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 4/84 (4%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
          +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L   S G + 
Sbjct: 5  YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62 FGAEAEAIVFAAARLDHVENVIRP 85
             +AE ++  AAR+  V NV  P
Sbjct: 65 ITDKAEVLIVLAARVQLVRNVTNP 88


>gi|14601836|ref|NP_148377.1| thymidylate kinase [Aeropyrum pernix K1]
 gi|8134528|sp|Q9YA48|KTHY_AERPE RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|5105789|dbj|BAA81101.1| thymidylate kinase [Aeropyrum pernix K1]
          Length = 208

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 14/170 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGA 64
            ++ EGI+G+G +TH  LL   L        + +EP   P     R  L S  GVD   +
Sbjct: 3   IVALEGIDGSGVSTHSRLLHARLAGAGVKSCLWKEPTEGPVGRLIRGFLRSTEGVD---S 59

Query: 65  EAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  A++FAA RL  +   V+       ++L+ DR+  SS AYQG    S   ++D     
Sbjct: 60  DLMALLFAADRLWGLRLGVVERCGGSPEVLVVDRYKYSSLAYQG--VGSGLEWVD----- 112

Query: 124 SVQEVMPDCTII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           +V    P+  I+  +D+P ++ L+R+  R         ++ ER   M  E
Sbjct: 113 AVNRKAPEAEILVYIDVPTEVALRRITARERREVFETPEFLERVKSMYEE 162


>gi|312897767|ref|ZP_07757183.1| dTMP kinase [Megasphaera micronuciformis F0359]
 gi|310621151|gb|EFQ04695.1| dTMP kinase [Megasphaera micronuciformis F0359]
          Length = 223

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 28/189 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL+R L      V     P     + A   + L     +FG
Sbjct: 3   GHLIIIEGGDGSGKATQTELLRRHLADDGEFVKAVSYPDYDSESSALVKMYLRG---DFG 59

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDS 111
            +A+ I        +A  R+   E   +    +G I+L DR+  S+  YQ     G+ D 
Sbjct: 60  TDADTINPYAASAFYAVDRIASYELKWKRFFKDGGIVLADRYTTSNMLYQMIKIPGKAD- 118

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            Q  +LD L +   +++    PD  I+LD+P+++  + +  R         D        
Sbjct: 119 -QDAYLDWLWDFEFKKLGLPEPDAVILLDVPLEVTERLMSERTGKTGGTTGD-------- 169

Query: 169 IHEKRRQIF 177
           IHEK R+  
Sbjct: 170 IHEKDREFL 178


>gi|301118893|ref|XP_002907174.1| thymidylate kinase [Phytophthora infestans T30-4]
 gi|262105686|gb|EEY63738.1| thymidylate kinase [Phytophthora infestans T30-4]
          Length = 216

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 40/231 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE---AARHVLLSCGVD 60
           G+F+ FEG++  GKTT   LL   L   +            P+A      R   +   + 
Sbjct: 5   GIFLLFEGVDRCGKTTQTKLLHDALNASS---------SSQPSALLHFPDRSTAIGKSIH 55

Query: 61  EFGAEAEA-------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            +   +EA       ++F+A R +     I   L  G+ ++ DR+  S  A+   +    
Sbjct: 56  SYLTSSEAMDDHVIHLLFSANRWEAASK-IESILASGQHIIMDRYSFSGVAFSAAKSG-- 112

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIH 170
            + LD      +    PD  I LD+PV     R    Q RY             +     
Sbjct: 113 -MSLDWCWAPEIGLPKPDAIIFLDVPVTQASTRADFGQERY-------------ETTAFQ 158

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV-SPLS 220
           EK  + F DI      + H+VD+  + + V   ++ I  E ++K   SPL+
Sbjct: 159 EKVYRNFYDIMERATPKWHVVDATGTIEQVQEKVMAIAKETIKKYAESPLT 209


>gi|295666950|ref|XP_002794025.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01]
 gi|226277678|gb|EEH33244.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01]
          Length = 232

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 18/222 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T  +LL++ LQ++ ++V   R P  T A     +  L  G     
Sbjct: 13  GALIVVEGLDRAGKSTQCALLQKTLQQEGHEVKYRRFPNRTTAIGKLINAYL-VGDSHLD 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++F+A R +  +  IR  +  G  ++ DR+  S   Y   +D    L LD   + 
Sbjct: 72  DHSIHLLFSANRWEAAKE-IRKDISNGISIIIDRYSYSGAVYSAAKDVP-GLSLDWAWQP 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181
            +    PD  + L++  +   +R    Y L         ER +  I + R RQ+F   I 
Sbjct: 130 EIGLPQPDIWLFLNISPEEAARR--GGYGL---------ERYENDILQARVRQLFQTFIE 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221
           R  P+   ++++  S   VA +IL+   + ++K   + PL S
Sbjct: 179 REDPENVCVINAGRSEVDVAQDILSEARKAIKKIQAIGPLRS 220


>gi|226287197|gb|EEH42710.1| thymidylate kinase [Paracoccidioides brasiliensis Pb18]
          Length = 232

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 18/222 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T  +LL++ LQR+ ++V   R P  T A     +  L  G  +  
Sbjct: 13  GALIVVEGLDRAGKSTQCALLQKTLQREGHEVKYRRFPDRTTAIGKLINAYL-VGDSQLD 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++F+A R +  +  I+  +  G  ++ DR+  S   Y   +D    L LD   + 
Sbjct: 72  DHSIHLLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKDVP-GLSLDWAWQP 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181
            +    PD  + L++  +   +R    Y L         ER +  I + R RQ+F   I 
Sbjct: 130 EIGLPQPDIWLFLNISPEEAARR--GGYGL---------ERYENDILQARVRQLFQTFIE 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221
           R  P    ++++  S   VA +IL+   + ++K   + PL S
Sbjct: 179 REDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 220


>gi|111023286|ref|YP_706258.1| thymidylate kinase [Rhodococcus jostii RHA1]
 gi|110822816|gb|ABG98100.1| probable thymidylate kinase [Rhodococcus jostii RHA1]
          Length = 227

 Score = 52.4 bits (124), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  I+ EG++GAGK T +  +   L  +   V     P  G +  A+ A   L     D 
Sbjct: 2   GKLIALEGLDGAGKRTLVGAVVGRLTEQGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R   V  +    L E  +++ DR++ S+ AY   R    +   F+ 
Sbjct: 62  SDSVYAMAVMFALDRSGAVGELAE-LLAEHDLVILDRYVASNAAYGAARLHQGADGEFVG 120

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +Q +  + +    PD  + LD+PV +  +R + R S   S  LD +ER D  + E+  +
Sbjct: 121 WVQNLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTGE 179

Query: 176 IFLDIA 181
           ++ ++A
Sbjct: 180 VYRELA 185


>gi|272761198|gb|ACZ95828.1| thymidylate kinase [Jujube witches'-broom phytoplasma]
          Length = 212

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 16/168 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT+ I  L+  L+  +    + +  G +   +  R + L+    E+   
Sbjct: 3   LIVFEGLDGSGKTSLIHALQPQLKTPH---QLYQGLGSSSLGKEIRDLFLNFQQVEY--- 56

Query: 66  AEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQ 121
                 + A +  ++  +I P L   ++++ DR+L S+YAYQ     ++  Q L L  + 
Sbjct: 57  ITRFYLSLANMSQIQAELIIPQLKNNQLIILDRWLPSTYAYQLFPFSKEKQQLLSLKQIF 116

Query: 122 EISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163
           +I+ + ++  PD  I LD+   IG  R +N+ +    L E   L YF+
Sbjct: 117 KINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQRDLIERQSLTYFQ 164


>gi|146303756|ref|YP_001191072.1| thymidylate kinase-like protein [Metallosphaera sedula DSM 5348]
 gi|145702006|gb|ABP95148.1| Thymidylate kinase-like protein [Metallosphaera sedula DSM 5348]
          Length = 210

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 36/227 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-----GTPAAEAARHVLLSCG 58
           G  I+ EG EG+G+T H+S LK +L+ + Y V VT   G     G P ++  R ++    
Sbjct: 3   GKIIALEGSEGSGRTYHVSSLKTYLEEQGYGV-VTFGLGMSRLMGEPISKKKRDIV---- 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              F      + +     D +EN ++P +  G + + D ++ +  A+   R       L+
Sbjct: 58  ---FQRRTLFLAYVTDLADQIENEVKPMVKAGFLAIADGYVSTLKAWGLARG------LE 108

Query: 119 SLQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERK-DVMI----- 169
                 V   +P   + L L   P +I ++R+     L++   LD      D+ I     
Sbjct: 109 EEWMNYVLSALPHANLSLGLVSSPREI-MRRI-----LKKKGVLDPLSSGIDICINGELF 162

Query: 170 --HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +E     F D  R       IVD++ +F+ V + I  IV + ++K
Sbjct: 163 SSYETYLNTFQDYLRKVIQNGVIVDTSRNFEVVKSEIATIVGDRIEK 209


>gi|223938822|ref|ZP_03630710.1| thymidylate kinase [bacterium Ellin514]
 gi|223892520|gb|EEF58993.1| thymidylate kinase [bacterium Ellin514]
          Length = 229

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 20/164 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG----TPAAEAARHVLLSCGV 59
           G  I+ EG++G+GK+T I LLKR+L+ + + V  +         +  ++  +  LL+   
Sbjct: 12  GRLIAVEGLDGSGKSTQIYLLKRWLELQGFKVFFSEWNSSQLVKSATSKGKKRELLT--- 68

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                   +++ A    D  E  + P L  G ++LCDR++ +++A    RD+ +    + 
Sbjct: 69  ----PTTFSLIHATDFADRYERQLVPLLRAGYLVLCDRYIFTAFA----RDTVRGCPPEW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           ++ +      PD T      +++ L+R+     L     L YFE
Sbjct: 121 VRGLYNFAAHPDLTFFFKAQLEVSLQRI-----LDGRPQLKYFE 159


>gi|148264612|ref|YP_001231318.1| thymidylate kinase [Geobacter uraniireducens Rf4]
 gi|146398112|gb|ABQ26745.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 227

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 24/167 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG +G+G++T + LLK +L+ K    H T   G        R  L+S  ++E 
Sbjct: 17  AGKLIVIEGADGSGRSTQMELLKDYLEGKG---HATVNVG------LLRSTLVSEELNEA 67

Query: 62  -----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                 G    ++ +A    D +EN I PA+  G I+L DR++ +  A    RD  +   
Sbjct: 68  KQGNVLGEITRSLFYATDFADQLENRIIPAMKAGFIVLADRYIYTLMA----RDIVRGAD 123

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            D ++ +    V+PD  I L +     ++R     + R+++ LDY+E
Sbjct: 124 RDWVRALYGIAVVPDLVIYLRVSPAQLVER-----NFRKNSTLDYWE 165


>gi|219121041|ref|XP_002185752.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582601|gb|ACI65222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 245

 Score = 52.4 bits (124), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 19/220 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCG 58
           ++ G F+  EG++  GKTT   LL + L          R P  T A      +++  S  
Sbjct: 8   ISRGAFVVLEGVDRCGKTTQSGLLLKRLLAAGIAACSMRFPDRTTATGKIIDQYLQSSQN 67

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHL 115
           +D+    A  ++F+A R +   + +   L  G  +LCDR+  S  A+     ++  +  L
Sbjct: 68  LDD---RAIHLLFSANRWESA-DALTAHLQAGTTVLCDRYAYSGVAFSASKIDKKGNSLL 123

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            LD  Q        PDC I LDL         Q     R     + +E+K++ I  + R 
Sbjct: 124 SLDWCQAPDQGLPAPDCVIFLDLS--------QAEAEQRGGYGGERYEKKEMQIRVRHRF 175

Query: 176 IFLDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQ 213
             L+       R     +D+A S + V  +I   V E +Q
Sbjct: 176 GDLEAIDKASGRVAWKFIDAAQSVEQVENDIWKAVEETIQ 215


>gi|262198778|ref|YP_003269987.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
 gi|262082125|gb|ACY18094.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
          Length = 572

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 31/209 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+ FEGI+G+GKTT  + + + L+R+   V   RE GG  A+       L   + EFG 
Sbjct: 1   MFVVFEGIDGSGKTTVSNKVAKVLRRRGLAVEHVRE-GGEFASP------LVGRMREFGK 53

Query: 65  E---------AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           +          E + + A     +   I+PAL  G ++  DR+L   Y+Y+      + +
Sbjct: 54  DPRNMAMAPLTELLFYVARDAQLLAECIQPALRRGGLVFADRYL---YSYEVLSHHGRGV 110

Query: 116 FLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYS-------LRESACLDYFERK 165
            +D ++ I       V PD  + LD  V+  L R + +           +         +
Sbjct: 111 PMDQVRPILDAVSGGVWPDLVVYLD--VEPTLARARRKVGKLIKKSKGGKPGGGSRKGLQ 168

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
            V    + R  +L++A   P+R  +VD+A
Sbjct: 169 GVGTQHRLRAGYLELAERDPERWLVVDNA 197


>gi|227826765|ref|YP_002828544.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|227829399|ref|YP_002831178.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|229583935|ref|YP_002842436.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238618864|ref|YP_002913689.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|284996770|ref|YP_003418537.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
 gi|227455846|gb|ACP34533.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|227458560|gb|ACP37246.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|228018984|gb|ACP54391.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238379933|gb|ACR41021.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|284444665|gb|ADB86167.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
 gi|323473847|gb|ADX84453.1| dTMP kinase [Sulfolobus islandicus REY15A]
 gi|323476501|gb|ADX81739.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
          Length = 213

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 73/142 (51%), Gaps = 8/142 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL I+FEGI+G+GK++   LLK +++ +  DV++T         +  +    +   +   
Sbjct: 3   GLLIAFEGIDGSGKSSQAVLLKDWIEMRR-DVYLTEWNSSDWIHDIIKE---AKKKNTLT 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ A    D  E  I P L  G +++CDR++ ++YA    RD  +++  + ++++
Sbjct: 59  PTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKKL 114

Query: 124 SVQEVMPDCTIILDLPVDIGLK 145
               + P+ T  + +  ++ L+
Sbjct: 115 YSFAIKPNFTFYIRVTPEVALE 136


>gi|218437720|ref|YP_002376049.1| dTMP kinase [Cyanothece sp. PCC 7424]
 gi|218170448|gb|ACK69181.1| dTMP kinase [Cyanothece sp. PCC 7424]
          Length = 207

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDE 61
           LFI  EGI+G+G +T  SLL+ +   K     ++ EP      +  R  +   + C  D+
Sbjct: 4   LFIVLEGIDGSGTSTQASLLQDYFINKGEKAVISPEPTSGVIGKLIREAMQKPIICLEDQ 63

Query: 62  FGAEAE-AIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              + + A +FAA R  H+ N    V +    +   ++  R+  SS AY       +  F
Sbjct: 64  QKFDQQMAYLFAADRHYHLYNDSDGVFKLIEKDQCHVITTRYYFSSLAYNC-HTPEEFKF 122

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +  L E   +   PD  I +DLPV++ L+R+Q R
Sbjct: 123 VSQLNE---RFPNPDLVIYIDLPVEVSLERLQER 153


>gi|269118666|ref|YP_003306843.1| thymidylate kinase [Sebaldella termitidis ATCC 33386]
 gi|268612544|gb|ACZ06912.1| thymidylate kinase [Sebaldella termitidis ATCC 33386]
          Length = 227

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 10/157 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LSCGV 59
           G  I  EG +G+GK T  +LL + L+ +N+++     P   +PA+E  +  L       V
Sbjct: 2   GKLIIIEGSDGSGKETQTNLLYKKLKERNFNIKKISFPNYESPASEPLKMYLSGEFGKDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLF 116
           ++  + A +  FA  R    +           I+L DR+  S+  +Q    E +  + +F
Sbjct: 62  NDVNSFAASTFFAVDRYASYKQDWEKFYNNSGIVLSDRYTTSNMVHQASKIENEEDKQIF 121

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           L  L ++   ++    PD  I LD+  ++  K + +R
Sbjct: 122 LKWLIDLEWNKLGLPTPDIVIFLDVSPELSQKLMSDR 158


>gi|258645659|ref|ZP_05733128.1| dTMP kinase [Dialister invisus DSM 15470]
 gi|260403025|gb|EEW96572.1| dTMP kinase [Dialister invisus DSM 15470]
          Length = 222

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LSCG 58
           +G  I  EGI+G+GK T   LL+  L ++  DV H++    G+P++   +  L       
Sbjct: 2   NGKLIVLEGIDGSGKATQSGLLEDHLIKRGKDVMHISFPDYGSPSSALVKMYLNGDFGRA 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
             +    A ++++A  R        +     G +++ DR+  S+  +Q  +   +  +  
Sbjct: 62  PGDVNPYAASMLYAVDRFASFRMKWKSFYENGGVVIADRYTTSNMVHQMTKYDDEGKRKE 121

Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           FL  L  +  +E+    PD  I+LD+P  +  K V+ R   ++   +D  E+
Sbjct: 122 FLSWLDHMEYEELELPRPDVVILLDVPPAVSKKLVRER--AKQGGSMDIHEQ 171


>gi|163784586|ref|ZP_02179432.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880147|gb|EDP73805.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 51

 Score = 52.0 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 31/48 (64%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51
          G+FI+FEGIEGAGK+T    L  +L  K  +  +TREPGGT   +  R
Sbjct: 3  GVFITFEGIEGAGKSTQAKKLYEYLISKGKNAVLTREPGGTKTGKKIR 50


>gi|221062039|ref|XP_002262589.1| thymidylate kinase [Plasmodium knowlesi strain H]
 gi|193811739|emb|CAQ42467.1| thymidylate kinase, putative [Plasmodium knowlesi strain H]
          Length = 219

 Score = 51.6 bits (122), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 13/147 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAE-AARHVLLSCGVDE 61
           G FI FEG++ +GK+T   LL   L+RKN +V H+      TP  +  A+++ +    ++
Sbjct: 16  GKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQ---ND 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R + +  + R  L +G  ++CDR     YAY G   SS  L L    
Sbjct: 73  MTNETIHLLFSANRWELMGEIKR-LLSKGVWVVCDR-----YAYSGVAYSSGALKLSKTW 126

Query: 122 EISVQE--VMPDCTIILDLPVDIGLKR 146
            ++  +  + PD    L++P +   +R
Sbjct: 127 CMNPDQGLIKPDVVFYLNVPPNYAQQR 153


>gi|261330431|emb|CBH13415.1| thymidylate kinase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 345

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 14/198 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGT-PAAEAARHVLLS--C 57
           + G  I FEG +GAGK T    +++ L ++    H + + P       +  R VL     
Sbjct: 126 SEGAVIVFEGGDGAGKATQTEYMRKRLDKEG-KAHASLDFPSDKHRYGKLIRKVLSGERG 184

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL 115
            + +   +  +++F+  R D +   +R  L  GK +L DR+  S++ +Q  +  +S +  
Sbjct: 185 ALHDLDPKLFSLLFSLNRFDTLPE-LRYWLTHGKKILLDRYYTSNFGHQASKLEESERSD 243

Query: 116 FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           F+  L+++ ++ +    PD  + LDLP    L  +Q R   RES  LD  E   +   E 
Sbjct: 244 FIRHLEQLELEWLKLPPPDVALYLDLPPAAALVAMQ-RDEKRES--LDIHETAGLSYKEN 300

Query: 173 RRQIFLDIARNQPDRCHI 190
            RQ ++   +NQ +   I
Sbjct: 301 VRQTYVWCCQNQRNWVQI 318


>gi|331695112|ref|YP_004331351.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190]
 gi|326949801|gb|AEA23498.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190]
          Length = 569

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG----GTPAAEAARHVLLSCGVD 60
           + I+FEG+ GAGK+T   +L R L+   +  HVT  P      T    A    LL  G D
Sbjct: 1   MLITFEGLPGAGKSTQSRMLARCLEANGH--HVTVLPDLATLDTEPISATLVDLLRTGDD 58

Query: 61  EFGAEAEAI----VFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQH 114
            F    +AI    + AA R D V  V+ PAL E    +++ DR + +  +Y       QH
Sbjct: 59  PFLRTGDAITDTMITAAIRADLVATVLDPALAENPAGVVIEDRGIHTMASYAIAALLRQH 118

Query: 115 -----LFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-------Y 161
                + LD L  ++ +    P   + L +P ++  +R   R   R  A  D       +
Sbjct: 119 RAPAEIALDWLNALTALAGPRPTRALWLRIPPNVAARRADERGGDRRPASTDEQRAHLTW 178

Query: 162 FERKDVMIHEKRRQI-FLDIARNQPDRCHIV 191
            +    ++ E+  Q+  LD+    P   H+ 
Sbjct: 179 VDHAYALLAERDPQLTVLDVIDLDPVDTHLA 209


>gi|290967771|ref|ZP_06559324.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L]
 gi|290782130|gb|EFD94705.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L]
          Length = 232

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 18/153 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I  EG +G+GK T   LL R L R+   V+ VT     +P++   +  L      +F
Sbjct: 3   GKLIVIEGGDGSGKATQADLLYRRLNREGKPVYKVTFPDYDSPSSMLVKMYLQG----QF 58

Query: 63  GAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---S 112
           G +A+++        +A  R    +   +  L +G I++ DR+  S+  YQ  + S   +
Sbjct: 59  GKQADSVNPYAASTFYAVDRFASYQMKWKTLLAQGYIIIADRYTTSNMLYQMIKISAPAA 118

Query: 113 QHLFLDSLQE---ISVQEVMPDCTIILDLPVDI 142
           +  +LD L +   I +   +PD  I+LD+P+ +
Sbjct: 119 RQTYLDWLWDFEFIKMGLPIPDIVILLDVPLAV 151


>gi|86159732|ref|YP_466517.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776243|gb|ABC83080.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 561

 Score = 51.6 bits (122), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 4/150 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           + +SFEGI+G+GKT   +L+   L+R   +V   RE G   T AA   R +     + E 
Sbjct: 1   MLVSFEGIDGSGKTALSNLVCERLRRGGREVVHARERGVLATAAARRVRELTRDPRLLEL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  A     +E V+RPAL  G + + DR L S  A            +++   
Sbjct: 61  SPRAELCLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            +     PD  +++D  VD  L R++ R  
Sbjct: 121 AASGGTWPDLAVLVD--VDPDLARLRKRVG 148


>gi|313157974|gb|EFR57380.1| dTMP kinase [Alistipes sp. HGB5]
          Length = 229

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 15/186 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60
           +FI  EG++GAGK+T I +L++    +  +   VH  R          AR +     GV 
Sbjct: 1   MFIVLEGLDGAGKSTQIRMLRQLFTDRGVESEYVHFPRFDSPVYGQLIARFLRGEFGGVQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114
           E      A++FA  R D     IR  L EGK ++ DR++ S+  +Q      GE      
Sbjct: 61  EVDPYLVALIFAGDRADAAPQ-IRQWLAEGKAVVLDRYVYSNVGFQCAKLPAGEERDRLA 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            ++ +L+        PD ++ LD+P     +++     +RE    DY +     IHE   
Sbjct: 120 DWIVNLEFGHNALPRPDLSLFLDVPFAFTERKLSE---VREGDDRDYLQGGQ-DIHEASL 175

Query: 175 QIFLDI 180
           Q+  D+
Sbjct: 176 QLQQDV 181


>gi|156044845|ref|XP_001588978.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980]
 gi|154694006|gb|EDN93744.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 242

 Score = 51.2 bits (121), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 10/162 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGV 59
           ++ G FI  EG++ AGKTT +  L   L     +V + R P  T +  +     L S  +
Sbjct: 18  LSRGSFILIEGLDRAGKTTQVRKLCDRLYASGRNVKLMRFPDRTTSIGQQINSYLQSSTI 77

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
                +A  ++F+A R +  +  I   + +G  ++CDR+  S   Y   +   DS  HL 
Sbjct: 78  --LPDQAIHLLFSANRWEKAQE-IHQFIAQGYTIVCDRYYYSGMIYTSSKYPTDSPNHLS 134

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRE 155
           L+  +   +   MPD  I LDL  +   KR      +Y  RE
Sbjct: 135 LEWCKNPEIGLPMPDKVIFLDLEPEEAEKRGGYGDEKYETRE 176


>gi|291514468|emb|CBK63678.1| thymidylate kinase [Alistipes shahii WAL 8301]
          Length = 228

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 23/231 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60
           +FI  EG++GAGK+T I +L++ L  +  +   VH  R          AR +     GV+
Sbjct: 1   MFIVLEGLDGAGKSTQIRMLRQLLAERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114
           E      A++FA  R       IR  + EGK ++ DR++ S+  +Q      GER     
Sbjct: 61  EVDPYLVALLFAGDRA-AAGPQIRAWIAEGKAVVLDRYVYSNVGFQCAKLPAGERRDRLA 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-----RKDVMI 169
            ++  L+        PD ++ LD+P     +++     +RE    DY +      +D + 
Sbjct: 120 QWILDLEFGYNDLPRPDLSLFLDVPFAFTERKLTE---VREGDDRDYLQGSRDIHEDALD 176

Query: 170 HEKR-RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
            ++R R+++L  A  + D   +VD +    ++ +   N  +E ++  ++P+
Sbjct: 177 LQRRVREVYL-AAAAKDDSLRVVDCSDPSGAMGSPEHN--FEKIRAVLAPI 224


>gi|168185104|ref|ZP_02619768.1| putative thymidylate kinase [Clostridium botulinum Bf]
 gi|237793368|ref|YP_002860920.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657]
 gi|182671852|gb|EDT83813.1| putative thymidylate kinase [Clostridium botulinum Bf]
 gi|229263044|gb|ACQ54077.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657]
          Length = 231

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQAKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111
           EFG + +++        +A  R    +       ++G I++ DR+  S+  +Q  +    
Sbjct: 58  EFGKDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDV 117

Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139
            ++  FL+ L +   ++    +PDC I LD+P
Sbjct: 118 QAKDNFLNWLWDFEFKKFNLPVPDCVIFLDMP 149


>gi|115373942|ref|ZP_01461233.1| integral membrane protein with kinase activity [Stigmatella
           aurantiaca DW4/3-1]
 gi|310817945|ref|YP_003950303.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|115369070|gb|EAU68014.1| integral membrane protein with kinase activity [Stigmatella
           aurantiaca DW4/3-1]
 gi|309391017|gb|ADO68476.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 560

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           + I FEGI+G+GKTT  + + + L++    V   RE G   +P +E+ R           
Sbjct: 1   MLIVFEGIDGSGKTTLSNRVAQELRQAGLRVRHVREGGQLASPVSESLRRFTRDPANLAL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----QGERDSSQHLFLD 118
              AE +++AA     ++ V RPAL    I++ DRF  ++       +G  ++S    LD
Sbjct: 61  TPMAELLLYAAREAQLLDEVTRPALATHDIVITDRFFYTAEVLARWGRGLPETSVRPVLD 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM---IHEKRRQ 175
           +      + + PD   ++D  VD  + R + + S   +       RK +    +  + R 
Sbjct: 121 A----CARGLKPDLVFLID--VDPTIARARRKISKIITPKPGAPSRKGLAGAGLQVRLRA 174

Query: 176 IFLDIARNQPDRCHIVDSA 194
            +  +A   P R  +V++A
Sbjct: 175 GYRTLAEESPGRWSLVENA 193


>gi|272761174|gb|ACZ95827.1| thymidylate kinase [Jujube witches'-broom phytoplasma]
          Length = 212

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 42/181 (23%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT+ I  L+                   P  +    +    G    G E
Sbjct: 3   LIVFEGLDGSGKTSLIHALQ-------------------PQLKTPHQLYQGLGSSSLGKE 43

Query: 66  AEAIVFAAARLDHVE--------------NVIRPALMEGKILLCDRFLDSSYAYQ---GE 108
              +     ++D++                +I P L   ++++ DR+L S+YAYQ     
Sbjct: 44  IRDLFLNFQQVDYITRFYLSLANMSQIQAELIVPQLKNNQLIILDRWLPSTYAYQLFPFS 103

Query: 109 RDSSQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYF 162
           ++  Q L L  + +I+ + ++  PD  I LD+   IG  R +N+ +    L E   L YF
Sbjct: 104 KEKKQLLPLKKIFKINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQRDLIERQSLTYF 163

Query: 163 E 163
           +
Sbjct: 164 Q 164


>gi|126701174|ref|YP_001090071.1| putative thymidylate kinase [Clostridium difficile 630]
 gi|254977174|ref|ZP_05273646.1| putative thymidylate kinase [Clostridium difficile QCD-66c26]
 gi|255094504|ref|ZP_05323982.1| putative thymidylate kinase [Clostridium difficile CIP 107932]
 gi|255102760|ref|ZP_05331737.1| putative thymidylate kinase [Clostridium difficile QCD-63q42]
 gi|255308581|ref|ZP_05352752.1| putative thymidylate kinase [Clostridium difficile ATCC 43255]
 gi|255316255|ref|ZP_05357838.1| putative thymidylate kinase [Clostridium difficile QCD-76w55]
 gi|255518916|ref|ZP_05386592.1| putative thymidylate kinase [Clostridium difficile QCD-97b34]
 gi|255652095|ref|ZP_05398997.1| putative thymidylate kinase [Clostridium difficile QCD-37x79]
 gi|306521829|ref|ZP_07408176.1| putative thymidylate kinase [Clostridium difficile QCD-32g58]
 gi|115252611|emb|CAJ70454.1| Thymidylate kinase (dTMP kinase) [Clostridium difficile]
          Length = 229

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L I   G + +GK T   +L   L+++ Y +     P     + A   + L     
Sbjct: 1   MKGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109
           +FG  A  +        F A R    +        EG I++ DR+  S+  +Q  +    
Sbjct: 58  DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDIC 117

Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150
           D  ++L   +  E ++ ++  PDC I LD+P++   K ++NR
Sbjct: 118 DREEYLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENR 159


>gi|170755522|ref|YP_001779682.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra]
 gi|169120734|gb|ACA44570.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra]
          Length = 231

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111
           EFG + +++        +A  R    +       ++G I++ DR+  S+  +Q  +    
Sbjct: 58  EFGRDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDV 117

Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139
            ++  FL+ L +   ++    +PDC I LD+P
Sbjct: 118 QAKDNFLNWLWDFEFKKFNLPVPDCVIFLDMP 149


>gi|168181169|ref|ZP_02615833.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916]
 gi|182667987|gb|EDT79966.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916]
 gi|322804327|emb|CBZ01877.1| thymidylate kinase [Clostridium botulinum H04402 065]
          Length = 231

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111
           EFG + +++        +A  R    +       ++G I++ DR+  S+  +Q  +    
Sbjct: 58  EFGRDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDV 117

Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139
            ++  FL+ L +   ++    +PDC I LD+P
Sbjct: 118 QAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149


>gi|260685068|ref|YP_003216353.1| putative thymidylate kinase [Clostridium difficile CD196]
 gi|260688726|ref|YP_003219860.1| putative thymidylate kinase [Clostridium difficile R20291]
 gi|260211231|emb|CBA66748.1| putative thymidylate kinase [Clostridium difficile CD196]
 gi|260214743|emb|CBE07430.1| putative thymidylate kinase [Clostridium difficile R20291]
          Length = 234

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L I   G + +GK T   +L   L+++ Y +     P     + A   + L     
Sbjct: 6   MKGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 62

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109
           +FG  A  +        F A R    +        EG I++ DR+  S+  +Q  +    
Sbjct: 63  DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDIC 122

Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150
           D  ++L   +  E ++ ++  PDC I LD+P++   K ++NR
Sbjct: 123 DREEYLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENR 164


>gi|48478173|ref|YP_023879.1| thymidylate kinase [Picrophilus torridus DSM 9790]
 gi|73920826|sp|Q6L016|KTHY_PICTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|48430821|gb|AAT43686.1| putative thymidylate kinase [Picrophilus torridus DSM 9790]
          Length = 202

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 23/173 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N  +FI+ EGI+G+GKTT    +  +        ++TREP      +            +
Sbjct: 4   NGSMFIAIEGIDGSGKTTLAGDIASYTG-----FYLTREPTDRFCYDYIEA--------D 50

Query: 62  FGAEAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHL 115
           +  E+  I F    LD    +  I+  L+ G  ++ DR++ SS AYQG    +R  +   
Sbjct: 51  YNDESSIINFFLFTLDRYMHQKEIKNHLING--VISDRYVFSSIAYQGSGMEKRFKNMDE 108

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  + ++S   +MPD  I L +   I LKR+  R +  E    D FER +++
Sbjct: 109 TISWMLDVSRFIIMPDLIIYLKIDPGIALKRLNLRKN--EKKNTDAFERLEML 159


>gi|329122084|ref|ZP_08250692.1| thymidylate kinase [Dialister micraerophilus DSM 19965]
 gi|327466891|gb|EGF12407.1| thymidylate kinase [Dialister micraerophilus DSM 19965]
          Length = 224

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LSCG 58
            G  I  EGI+G+GK T   LL   L++ N  V  VT     + ++   +  L       
Sbjct: 2   GGKLIVLEGIDGSGKATQSELLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
            ++    A ++ +A  R    +   +    +G I++ DR+  S+  +Q  +   +  +  
Sbjct: 62  PEDVNPYAASMFYAVDRFASYKMKWKKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121

Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           FL  L+E   + +    PD  I+LD+P++I  K V+ R
Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKER 159


>gi|306821414|ref|ZP_07455019.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550536|gb|EFM38522.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 217

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 34/200 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGAEAEAI 69
           G +  GK T  +LL   L++ N  + V       P  ++A   L+   ++ +FG   E +
Sbjct: 10  GSDACGKATQSNLLYTHLKKDNKVLKVE-----FPNYKSATSSLVKMYLNGDFGKNPEDV 64

Query: 70  -------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDS--SQHLFLDS 119
                   FAA R    +  I     +  I++ DR+  S+  YQ G+ D    ++ FLD 
Sbjct: 65  NPYITSTFFAADRYATFKTEIEKYYNDDYIIIADRYTTSNMVYQAGKYDDIDEKNKFLDW 124

Query: 120 LQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L   E ++ E+  PD    LDLP +I  K ++NR S+++          DV IHE  R  
Sbjct: 125 LYDFEFNLYELPKPDKVFFLDLPFEISYKLMKNR-SVKKGV--------DVDIHENSRDY 175

Query: 177 FLDIARN------QPDRCHI 190
              +  N      +   CHI
Sbjct: 176 LEKVYENAKFVAEKYGWCHI 195


>gi|153940357|ref|YP_001389419.1| putative thymidylate kinase [Clostridium botulinum F str.
           Langeland]
 gi|152936253|gb|ABS41751.1| putative thymidylate kinase [Clostridium botulinum F str.
           Langeland]
 gi|295317529|gb|ADF97906.1| putative thymidylate kinase [Clostridium botulinum F str. 230613]
          Length = 231

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MQRGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111
           EFG + +++        +A  R    +       ++G I++ DR+  S+  +Q  +    
Sbjct: 58  EFGRDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDV 117

Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139
            ++  FL+ L +   ++    +PDC I LD+P
Sbjct: 118 QAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149


>gi|284992962|ref|YP_003411516.1| major facilitator superfamily protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284066207|gb|ADB77145.1| major facilitator superfamily MFS_1 [Geodermatophilus obscurus DSM
           43160]
          Length = 727

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 23/157 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-------- 55
           GLFI  EG +      + + L + L+     V VT EP  T      R +L         
Sbjct: 482 GLFIVVEGADRELTRRYAADLAQVLRDCGCPVEVTSEPSDTQLGRQVRGLLFPPPPGSGT 541

Query: 56  -----SCGVDE----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
                   VD+     GA   A++ AA R  HV  VIRPAL   ++++   ++D+S A+ 
Sbjct: 542 GFPQPEPAVDDTGSPIGAHTAALLAAADRAQHVAAVIRPALERRRVVVNTHYVDTSIAFH 601

Query: 107 GERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPV 140
           G   + Q L  D +   S+   + ++PD T+++D PV
Sbjct: 602 G---AGQGLDADRIFRTSLWATRGLLPDLTVVVDSPV 635


>gi|257057529|ref|YP_003135361.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
 gi|256587401|gb|ACU98534.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
          Length = 642

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GL I  EG   A      + L ++L   +  V +  +P    A +  R   L  G    
Sbjct: 439 NGLLIVLEGTTAADTAAQAAHLAQWLGSGSQRVVLAADP----ALDDERLTSLMSGAALT 494

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA A+A+  AA R D VE  +RPAL EG I++ +RF+D+  A+           L+ L +
Sbjct: 495 GARAKALAAAAVRADIVERNVRPALDEGAIVVMERFVDTPLAHLSAMAGLDATELEGLTD 554

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T++LD   D G    Q+  +                 H + ++I  ++A 
Sbjct: 555 WATGALRPDLTVLLD--ADPGEASEQSTSTAEH--------------HWRVQEILAEMAA 598

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + PDR  +VD+  +   VA  +   V E +  +V+
Sbjct: 599 SAPDRYVVVDAEGTEAEVAERVRVSVSEALSGKVA 633


>gi|226305654|ref|YP_002765614.1| thymidylate kinase [Rhodococcus erythropolis PR4]
 gi|226184771|dbj|BAH32875.1| putative thymidylate kinase [Rhodococcus erythropolis PR4]
          Length = 213

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 10/186 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  ++ EG++GAGK T I  ++  L+R    +     P  G +  A+ A   L     D 
Sbjct: 2   GTLVALEGLDGAGKRTLIGKVETELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115
                A A++FA  R    +  I   L    I+L DR++ S+ AY   R     D     
Sbjct: 62  AESVNAMAVLFALDRAGAADR-ISELLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++  L+   +    PD  + LD+PV +  +R ++R +   S  LD +ER D  +  +  +
Sbjct: 121 WIRELELGRLALPAPDLQLYLDVPVALAEQRARSREAQDASRQLDAYER-DGGLQARTGE 179

Query: 176 IFLDIA 181
           ++  +A
Sbjct: 180 LYKQLA 185


>gi|310830106|ref|YP_003962463.1| putative thymidylate kinase [Eubacterium limosum KIST612]
 gi|308741840|gb|ADO39500.1| putative thymidylate kinase [Eubacterium limosum KIST612]
          Length = 228

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 16/162 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G  I  EG++G+GK T    L   L+R+   V     P    A+ A   + LS     
Sbjct: 3   NKGQLIVIEGVDGSGKQTQTEKLYDRLKREGQRVMKVSYPRYDKASSAMVRLYLSGA--- 59

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSS 112
           FG + ++I        +AA R    +        +G I++ DR+  S+  +Q  +  D  
Sbjct: 60  FGNDPDSISPYIASTFYAADRYASYKEDYETFYRDGGIVIADRYTTSNMVHQAGKISDPE 119

Query: 113 QHL-FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           + + F+D L +    ++   +PD    L++P +I  K ++ R
Sbjct: 120 ERVRFMDWLSDYEFNKMELPVPDAVFFLNIPPEINFKLMEGR 161


>gi|148378062|ref|YP_001252603.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC
           3502]
 gi|153932140|ref|YP_001382461.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC
           19397]
 gi|153937766|ref|YP_001386013.1| putative thymidylate kinase [Clostridium botulinum A str. Hall]
 gi|148287546|emb|CAL81610.1| thymidylate kinase [Clostridium botulinum A str. ATCC 3502]
 gi|152928184|gb|ABS33684.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC
           19397]
 gi|152933680|gb|ABS39179.1| putative thymidylate kinase [Clostridium botulinum A str. Hall]
          Length = 231

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 10/149 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQ 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +     ++
Sbjct: 61  RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLP 139
             FL+ L +   ++    +PDC I LD+P
Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149


>gi|255657498|ref|ZP_05402907.1| putative thymidylate kinase [Clostridium difficile QCD-23m63]
          Length = 229

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L I   G + +GK T   +L   L+++ Y +     P     + A   + L     
Sbjct: 1   MKGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109
           +FG  A  +        F A R    +        EG I++ DR+  S+  +Q  +    
Sbjct: 58  DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVC 117

Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150
           D  ++L   +  E ++ ++  PDC + LD+P++   K ++NR
Sbjct: 118 DREKYLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENR 159


>gi|313891688|ref|ZP_07825295.1| dTMP kinase [Dialister microaerophilus UPII 345-E]
 gi|313119966|gb|EFR43151.1| dTMP kinase [Dialister microaerophilus UPII 345-E]
          Length = 224

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 10/158 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LSCG 58
            G  I  EGI+G+GK T   LL   L++ N  V  VT     + ++   +  L       
Sbjct: 2   GGKLIVLEGIDGSGKATQSQLLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
            ++    A ++ +A  R    +        +G I++ DR+  S+  +Q  +   +  +  
Sbjct: 62  PEDVNPYAASMFYAVDRFASYKMKWEKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121

Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           FL  L+E   + +    PD  I+LD+P++I  K V+ R
Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKER 159


>gi|296449094|ref|ZP_06890884.1| thymidylate kinase [Clostridium difficile NAP08]
 gi|296879917|ref|ZP_06903890.1| thymidylate kinase [Clostridium difficile NAP07]
 gi|296262187|gb|EFH08992.1| thymidylate kinase [Clostridium difficile NAP08]
 gi|296429206|gb|EFH15080.1| thymidylate kinase [Clostridium difficile NAP07]
          Length = 234

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L I   G + +GK T   +L   L+++ Y +     P     + A   + L     
Sbjct: 6   MKGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 62

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109
           +FG  A  +        F A R    +        EG I++ DR+  S+  +Q  +    
Sbjct: 63  DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVC 122

Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150
           D  ++L   +  E ++ ++  PDC + LD+P++   K ++NR
Sbjct: 123 DREKYLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENR 164


>gi|325066507|ref|ZP_08125180.1| thymidylate kinase [Actinomyces oris K20]
          Length = 63

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/41 (58%), Positives = 28/41 (68%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT 44
          GLFISFEG +G GKTT I +L   L   + D  +TREPGGT
Sbjct: 21 GLFISFEGGDGVGKTTQIRILADLLTAADVDHILTREPGGT 61


>gi|170761117|ref|YP_001785385.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169408106|gb|ACA56517.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 231

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111
           EFG + +++        +A  R    +        +G I++ DR+  S+  +Q  +    
Sbjct: 58  EFGMDPDSVNPYASSTFYAVDRFASYKKDWEEFYQKGGIIIADRYTTSNMIHQAAKIKDV 117

Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139
            ++  FL+ L +   ++    +PDC I LD+P
Sbjct: 118 QAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149


>gi|288559843|ref|YP_003423329.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1]
 gi|288542553|gb|ADC46437.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1]
          Length = 196

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63
           ++I  EGI+GAGK+T I+ LK +L+   + V    EP         R +L  S    +  
Sbjct: 1   MYIVLEGIDGAGKSTQINYLKGWLEDNGFKVETIVEPTDLEVGNLIRQLLTRSDATSDTM 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   ++FAA RL  ++  I     E  +++ DR   SS  YQ  +        D ++EI
Sbjct: 61  QKTLGLLFAADRLVLMDK-IEKLESERTVVISDRSFYSSLVYQKPQ--------DWIREI 111

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +             +P  + L  +  + S+      D FE ++ +   K    +L ++R 
Sbjct: 112 NK---------FAKIPDLVLLLDLDVKKSVERCDGTDEFENEEFLTGVKEN--YLALSR- 159

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           + D   I+D+ +    VA++I        +K V+PL
Sbjct: 160 ENDNFKIIDANNGPNKVASDI--------KKAVAPL 187


>gi|15898045|ref|NP_342650.1| thymidylate kinase related protein [Sulfolobus solfataricus P2]
 gi|13814386|gb|AAK41440.1| Thymidylate kinase related protein [Sulfolobus solfataricus P2]
          Length = 208

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60
          L I+FEGIEG+GKT+H+   K++L+++ Y V        +  G   A+  R+++      
Sbjct: 4  LIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 57

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
           F      + +     D +EN ++P++  G I L D +
Sbjct: 58 -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGY 94


>gi|226365793|ref|YP_002783576.1| thymidylate kinase [Rhodococcus opacus B4]
 gi|226244283|dbj|BAH54631.1| thymidylate kinase [Rhodococcus opacus B4]
          Length = 227

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  I+ EG++GAGK T +  +   L  +   V     P  G +  A+ A   L     D 
Sbjct: 2   GTLIALEGLDGAGKRTLVGAVVDRLTERGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQHLFL 117
                A A++FA  R   V  +    L+ G  +++ DR++ S+ AY   R   ++   F+
Sbjct: 62  AESVHAMAVMFALDRSGAVGEL--SDLLAGHDLVILDRYVASNAAYGAARLHQAADGEFV 119

Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             ++ +  + +    PD  + LD+PV +  +R + R S   S  LD +ER D  + E+  
Sbjct: 120 GWVENLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTG 178

Query: 175 QIFLDIA 181
           +++ ++A
Sbjct: 179 EVYRELA 185


>gi|262089274|gb|ACY24495.1| thymidylate kinase [uncultured crenarchaeote 57a5]
          Length = 245

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-------GTPAAEAARHVLLS 56
           G FI  EG + +G++T I LL   L+    D H     G       G    EA R+ +L 
Sbjct: 34  GRFIIIEGPDASGRSTQIELLSSKLEA---DGHAVLNAGLRRSELIGQGILEAKRNFVL- 89

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                 G +  ++ +AA   D +EN I P L  G ++L DR++ +  A +  R  S   +
Sbjct: 90  ------GRKTISLFYAADFADQLENKIIPGLRAGYVVLSDRYIYTLMAREAVRGISSS-W 142

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            ++L   +++   PD    LD+  +  + RV      ++++ LDY+E
Sbjct: 143 SNNLYGFALR---PDIVFYLDVDPNELVHRV-----FKKNSYLDYYE 181


>gi|227541887|ref|ZP_03971936.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182330|gb|EEI63302.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 205

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 16/210 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS-CGVDE 61
           + ++ EGI+GAGK T   L++  L  KN D      P    + AA+ AR  L    G   
Sbjct: 1   MILAVEGIDGAGKNT---LVRDLL--KNIDAETLSFPRYSTSDAAKLARKALYGRMGDMT 55

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFL 117
               A A +FA  R    E + + A  +  IL+ DR++ S+ AY   R    D++Q ++ 
Sbjct: 56  ESPYAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYD 115

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
               E+ + +  P   I+L+ P  +  +R ++R         D +E +D  +  +    +
Sbjct: 116 LEYGELGLPK--PALQILLETPASVAQERAESRARAERDRAKDTYE-QDSSLQVRTSVAY 172

Query: 178 LDIARNQ-PDRCHIVDSAHSFQSVATNILN 206
             +AR Q      IV    + Q     ILN
Sbjct: 173 RRLARGQWASPWLIVPHTTTPQEATEEILN 202


>gi|256419682|ref|YP_003120335.1| thymidylate kinase [Chitinophaga pinensis DSM 2588]
 gi|256034590|gb|ACU58134.1| thymidylate kinase [Chitinophaga pinensis DSM 2588]
          Length = 228

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 15/191 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCG 58
           N+  FI+ EG++GAGK+T I+LL++F  ++  +      P    G      A+ +    G
Sbjct: 3   NNSRFIAIEGLDGAGKSTQINLLQQFFNQQGIETRFVHFPIVQEGVFGEMIAKFLRGEFG 62

Query: 59  -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114
            V +   +  A++FA  R     + I   L  G ++L DR++ S+ A+Q  +   D  + 
Sbjct: 63  DVKDVHPQLVALLFAEDR-KAFSHTINEWLASGYVVLVDRYVLSNIAFQCAKLKTDKEKQ 121

Query: 115 LFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              D +   E     +  PD ++ LD+P     + +  R   R      Y   KD  IHE
Sbjct: 122 ELRDWINMFEYEYNRIPQPDLSVYLDVPFSHTEQALARR---RSGEDRKYLNGKD-DIHE 177

Query: 172 KRRQIFLDIAR 182
           K   + L + R
Sbjct: 178 KDFSLQLAVKR 188


>gi|229489508|ref|ZP_04383371.1| thymidylate kinase [Rhodococcus erythropolis SK121]
 gi|229323605|gb|EEN89363.1| thymidylate kinase [Rhodococcus erythropolis SK121]
          Length = 213

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 9/169 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  ++ EG++GAGK T I  ++  L+R    +     P  G +  A+ A   L     D 
Sbjct: 2   GTLVALEGLDGAGKRTLIGKVESELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115
                A A++FA  R    +  I   L    I+L DR++ S+ AY   R     D     
Sbjct: 62  AESVNAMAVLFALDRAGAADR-ISDLLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           ++  L+   +    PD  + LD+PV +  +R ++R +   S  LD +ER
Sbjct: 121 WVRELELGRLALPAPDLQLYLDVPVALAEQRARSREAEDASRQLDAYER 169


>gi|118351574|ref|XP_001009062.1| thymidylate kinase family protein [Tetrahymena thermophila]
 gi|89290829|gb|EAR88817.1| thymidylate kinase family protein [Tetrahymena thermophila SB210]
          Length = 211

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI FEG++  GKT+    L  FL+       + R P  T       +  L  G     
Sbjct: 5   GLFIVFEGLDRCGKTSQCENLVNFLKESGKKAIMKRYPDRTTTIGQTINNYLQ-GKQNLS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +A  ++F+A R +  E  I+  L EG  ++CDR+  S   Y     S++   ++  +  
Sbjct: 64  DQAIHLIFSANRWEQQEE-IKKILDEGTNIVCDRYCYSGAVYT----SAKGYDIEWCKNP 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
               + PD  + L  P ++  KR
Sbjct: 119 DKGLIKPDIVLYLHAPKEVISKR 141


>gi|72392843|ref|XP_847222.1| thymidylate kinase [Trypanosoma brucei TREU927]
 gi|62358480|gb|AAX78942.1| thymidylate kinase, putative [Trypanosoma brucei]
 gi|70803252|gb|AAZ13156.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 345

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGT-PAAEAARHVLLS--CGVDEF 62
           I FEG +GAGK T    +++ L ++    H + + P       +  R VL      + + 
Sbjct: 131 IVFEGGDGAGKATQTEYMRKRLDKEG-KAHASLDFPSDKHRYGKLIRKVLSGERGALHDL 189

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSL 120
             +  +++F+  R D +   +R  L  GK +L DR+  S++ +Q  +  +S +  F+  L
Sbjct: 190 DPKLFSLLFSLNRFDTLPE-LRYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHL 248

Query: 121 QEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +++ ++ +    PD  + LDLP    L  +Q R   RES  LD  E   +   E  RQ +
Sbjct: 249 EQLELEWLKLPPPDVALYLDLPPAAALVAMQ-RDEKRES--LDIHETAGLSYKENVRQTY 305

Query: 178 LDIARNQPDRCHI 190
           +   +NQ +   I
Sbjct: 306 VWCCQNQRNWVQI 318


>gi|229583123|ref|YP_002841522.1| thymidylate kinase related protein [Sulfolobus islandicus
          Y.N.15.51]
 gi|228013839|gb|ACP49600.1| thymidylate kinase related protein [Sulfolobus islandicus
          Y.N.15.51]
          Length = 208

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 12/102 (11%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLS 56
          MN+ L I+FEGIEG+GKT+H+   K++L+++ Y V        +  G    +  R++L  
Sbjct: 1  MNT-LIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIL-- 57

Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
               F      + +     D +EN + P++  G I L D +
Sbjct: 58 -----FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 94


>gi|300853347|ref|YP_003778331.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528]
 gi|300433462|gb|ADK13229.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528]
          Length = 227

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 20/202 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           +  G  I  EG +G+GK T    L + L  +NY++     P     + A   + L+    
Sbjct: 3   LQKGKLIVIEGCDGSGKATQTEKLYKRLLNENYNLKKIEYPNYNSESSALVRMYLNGDFG 62

Query: 60  ---DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQ 113
              ++  A A +  +A  R    +   +     G I+L DR+  ++  +Q  +      +
Sbjct: 63  KKPEDVSAYAASTFYAVDRFASYKMEWKKFYENGGIILADRYTTANMIHQASKIDDLEEK 122

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           + FL  L           +PDC I LD+P +   K +  R +            KD  IH
Sbjct: 123 NKFLKWLWNFEFDIFRLPVPDCVIFLDMPPEYSKKLMTKRNNKFTGNA-----EKD--IH 175

Query: 171 EKRRQIFLDIARNQPDRCHIVD 192
           E+  +  ++  +N     HIVD
Sbjct: 176 ERDYEYLVNSYKNA---IHIVD 194


>gi|197294494|ref|YP_001799035.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853821|emb|CAM11765.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 195

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 20/159 (12%)

Query: 42  GGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS 101
           G +   +  R++ L     +   + + ++  A  L   + +I PAL+ G ++L DR+  S
Sbjct: 15  GSSIVGKEIRNLFLHQS--KISPKTKYLLSLANMLQTQDELIFPALLSGYLVLVDRWYGS 72

Query: 102 SYAYQGERDSSQHLFLDSLQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           ++AYQ + +     ++D   +I+ +      + P  T  LD+   IG++R QN+ + +  
Sbjct: 73  TFAYQSKGN-----YIDYDDKITSKIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK-- 125

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH 195
             LD  ERK +   E  R+ +L    NQ   C+  +  H
Sbjct: 126 --LDLIERKPLNYFENVRKHYL----NQHKYCNDANCNH 158


>gi|325675694|ref|ZP_08155378.1| thymidylate kinase [Rhodococcus equi ATCC 33707]
 gi|325553665|gb|EGD23343.1| thymidylate kinase [Rhodococcus equi ATCC 33707]
          Length = 222

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 10/186 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G+ I+ EG++GAGK T +  +   L+    DV     P  G +  A+ A   L     D 
Sbjct: 2   GMLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R    +  +R  +    +++ DR++ S+ AY   R  +     F+ 
Sbjct: 62  SASVHAMAVMFALDRAGAADR-LRDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVG 120

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ +    +    PD  + LD+PV +  +R + R +   S  LD +E KD  +  +  +
Sbjct: 121 WIENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYE-KDSGLQARTGE 179

Query: 176 IFLDIA 181
           ++ ++A
Sbjct: 180 VYRELA 185


>gi|45358597|ref|NP_988154.1| thymidylate kinase [Methanococcus maripaludis S2]
 gi|59798295|sp|Q6LYF7|KTHY_METMP RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|44921355|emb|CAF30590.1| Thymidylate kinase [Methanococcus maripaludis S2]
          Length = 199

 Score = 49.7 bits (117), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 14/145 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G GKTT   L+   L     + + T EP      ++ R +L     ++   E
Sbjct: 4   FIVFEGIDGCGKTTQAKLVAEKL-----NANFTFEPTDGKIGKSIREILAGSKCNK---E 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FAA R++HV  +     ++   ++ DR++ SS  YQ     +Q +  D + +I+ 
Sbjct: 56  TLALLFAADRVEHVSKIEED--LKNAHVVSDRYVYSSIVYQ----MTQGIPKDFIYKIND 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150
              +PD  ++LD+ ++  LKR+++R
Sbjct: 110 YAKIPDLVVLLDVDLNEALKRMESR 134


>gi|310779557|ref|YP_003967890.1| thymidylate kinase [Ilyobacter polytropus DSM 2926]
 gi|309748880|gb|ADO83542.1| thymidylate kinase [Ilyobacter polytropus DSM 2926]
          Length = 223

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 16/160 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG + +GK T   +L   L+ +   V     P     A A   + L+    EFG
Sbjct: 2   GKLIVIEGTDSSGKQTQTEILYEKLKSQGIKVKKISFPNYDSPASAPVKMYLAG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-- 114
            +A  +       ++A  R    +       +E  +++ DR+  S+  +Q  + +  H  
Sbjct: 59  KKANEVNPYPVSTMYAVDRYASFKKDWEDFYLEAGVVITDRYTTSNMVHQASKFTDPHEK 118

Query: 115 -LFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
             +LD L+++   ++    PD    L++PVD+  K + +R
Sbjct: 119 VKYLDWLEDLEYDKMEIPKPDLVFFLNMPVDVAQKLMSDR 158


>gi|298709115|emb|CBJ31061.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 228

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G FI FEG++  GKTT  +LL   L++  +D    R P   TP        L +    + 
Sbjct: 15  GAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLRN--TTDI 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +  E+ IR  L  G  ++CDR+  S  A+     S   L +   ++
Sbjct: 73  DDRCVHLLFSANRWE-AESKIRELLKAGTTVVCDRYAYSGVAFSA---SKPGLSVRWCKD 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRE 155
                  PD  + LD+ V+  +KR Q    RY   E
Sbjct: 129 PDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEE 164


>gi|284175898|ref|ZP_06389867.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2]
 gi|261602757|gb|ACX92360.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2]
          Length = 205

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 11/98 (11%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60
          + I+FEGIEG+GKT+H+   K++L+++ Y V        +  G   A+  R+++      
Sbjct: 1  MIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 54

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
           F      + +     D +EN ++P++  G I L D +
Sbjct: 55 -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGY 91


>gi|253581348|ref|ZP_04858574.1| dTMP kinase [Fusobacterium varium ATCC 27725]
 gi|251836712|gb|EES65246.1| dTMP kinase [Fusobacterium varium ATCC 27725]
          Length = 232

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 20/162 (12%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T    L +R L  K Y+V     P   +PA E  +  L      +
Sbjct: 11  GKLIVIEGTDSSGKETQTKKLFERLLNEK-YNVKKISFPNYDSPACEPVKMYLAG----K 65

Query: 62  FGAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A        ++++A  R    +        E  I++ DR++ S+  +Q  +   ++
Sbjct: 66  FGEDAMKVNPYPVSMMYAIDRYASYKMDWEKFYQEDGIIVTDRYVTSNMVHQASKIIDET 125

Query: 112 SQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
            ++++L+ L E+   ++    PD  I L++P ++ LK ++ R
Sbjct: 126 EKNVYLNWLDELEYDKMDIPRPDLVIFLNMPTEMALKLMEER 167


>gi|302338530|ref|YP_003803736.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293]
 gi|301635715|gb|ADK81142.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293]
          Length = 206

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 20/208 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +  FEG++GAG TT   LL    + K   V +T EP  +      R VL   G   +  E
Sbjct: 10  YTVFEGLDGAGTTTQALLLADRCKLKGKAVQLTFEPTASEIGVVIRKVL--AGQLPYHPE 67

Query: 66  AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A +F A R +H+  +  I   L +   ++ DR+L SS AYQ     S  +  D + EI
Sbjct: 68  TLARLFVADRYEHLFGKGGILSLLDKHIAVIGDRYLFSSLAYQ-----SLDVDFDIVYEI 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LDI 180
           +    +P+  I +DL  +   +R+ +R         D FE   + + ++ R+ +   LD 
Sbjct: 123 NSMFPLPERLIYIDLAPEECERRMSDRDQ------RDIFE--TLALQKRVRERYEHTLDR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
                 + H +D A + + +A  + +IV
Sbjct: 175 YVKSGMKIHRLDGALAKEELAEKVWSIV 202


>gi|156096007|ref|XP_001614038.1| thymidylate kinase [Plasmodium vivax SaI-1]
 gi|148802912|gb|EDL44311.1| thymidylate kinase, putative [Plasmodium vivax]
          Length = 219

 Score = 49.3 bits (116), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 11/146 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAE-AARHVLLSCGVDE 61
           G FI FEG++ +GK+T   LL   L+RKN +V H+      TP  +  A+++ +     +
Sbjct: 16  GKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQS---D 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
              E   ++F+A R + +  + R  L  G  ++CDR+  S  AY  G    S+   ++  
Sbjct: 73  MTNETIHLLFSANRWELMGEIKR-LLASGVWVVCDRYAYSGVAYSAGALKLSKTWCMNPD 131

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146
           Q +    + PD    L++P +    R
Sbjct: 132 QGL----IKPDVVFYLNVPPNYAQNR 153


>gi|321455804|gb|EFX66927.1| hypothetical protein DAPPUDRAFT_331571 [Daphnia pulex]
          Length = 212

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 6/139 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG + +GKTT      R+LQ  N + H+ R P  +    +  +  L C   E  
Sbjct: 5   GALIVLEGCDRSGKTTQCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECST-ELD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R + + + I+  L +G  ++ DR+  S  A+     S  ++ L   Q+ 
Sbjct: 64  DHAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSA---SKPNMDLRWCQQS 119

Query: 124 SVQEVMPDCTIILDL-PVD 141
               + PD  I LD+ PV+
Sbjct: 120 DSGLLKPDLVIFLDINPVE 138


>gi|134045602|ref|YP_001097088.1| thymidylate kinase [Methanococcus maripaludis C5]
 gi|166221754|sp|A4FXE4|KTHY_METM5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|132663227|gb|ABO34873.1| dTMP kinase [Methanococcus maripaludis C5]
          Length = 199

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 14/145 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G GKTT   L+   L  K      T EP      ++ R +L      +   E
Sbjct: 4   FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREILSGSQCQK---E 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FAA R++HV N+     ++   ++ DR++ SS  YQ     SQ +  D +  I+ 
Sbjct: 56  TLALLFAADRVEHVFNIEED--LKKSHVVSDRYVYSSIIYQ----ISQGISKDFIYTIND 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150
               PD  ++LD+ ++  LKR+++R
Sbjct: 110 YAKTPDLVVLLDVDLNEALKRMESR 134


>gi|146303757|ref|YP_001191073.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula
           DSM 5348]
 gi|145702007|gb|ABP95149.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula
           DSM 5348]
          Length = 213

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 16/151 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCG 58
            G  I+FEGI+G+GK++   LLK +L  +  D ++T             EA +  LL+  
Sbjct: 2   GGSIIAFEGIDGSGKSSQAKLLKDWLDSR-VDAYLTEWNSSDWIHEVIKEAKKKNLLT-- 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                    +++ A    D  E +I P    G +++ DR+  ++YA    RDS + + L+
Sbjct: 59  -----PLTFSLIHATDFADRYERLILPMYRTGFVVVSDRYYYTAYA----RDSVRGVSLE 109

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
            ++++      PD T  + +  ++ L R++ 
Sbjct: 110 WVKKLYSYAPKPDITFFIRVTPEVALSRLKE 140


>gi|302410089|ref|XP_003002878.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
 gi|261357902|gb|EEY20330.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
          Length = 285

 Score = 48.9 bits (115), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 40/238 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           +  G  +  EG++ +GKTT + LL++        V V R P   TP  +     L S   
Sbjct: 50  ITRGALVILEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRSTPIGQMIDAYLKSS-- 107

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E       ++F+A R + V+  IR  L  G  +LCDR+  S   Y   + +   L L  
Sbjct: 108 VEMDDHVIHLLFSANRWEAVKT-IRQLLASGTTVLCDRYYHSGIVYSAAKHNPS-LSLHW 165

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +   V    PD  + LDL         +     R     + +ER +  +  + R++F  
Sbjct: 166 ARAPDVGLPRPDLVLFLDLD--------EATAKSRGGWGGELYERGE--MQRRVRELFWG 215

Query: 180 IA---------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +A                     R + +   +VD+  S + VA  I    WE VQ RV
Sbjct: 216 LAMGRIGADGGLGDEDRRVDREFRQEEEDLVVVDAGASVEEVAEGI----WEKVQPRV 269


>gi|326383262|ref|ZP_08204950.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198012|gb|EGD55198.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395]
          Length = 209

 Score = 48.5 bits (114), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 9/179 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G+ ++ EG++GAGK T +  ++     +   V     P  G +  A+ A   L     D 
Sbjct: 2   GILVAVEGLDGAGKRTIVGRIEAAATDRGASVSTLAFPRYGESITADLASEALHGRHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115
                A A++FA  R       +R AL    +++CDR+  S+ AY   R     DS    
Sbjct: 62  RESVYAMALLFALDRA-AARRQLREALTAHDLVICDRYCASNAAYSAARLGGGADSEVVE 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           ++  L+    Q  +PD  ++L +P D+ + R   R        +D +ER   + H   R
Sbjct: 121 WVADLEFGRFQLPVPDHQLLLGVPPDVAMSRANGRAETDADRPVDSYERDAELQHAVYR 179


>gi|158318239|ref|YP_001510747.1| thymidylate kinase [Frankia sp. EAN1pec]
 gi|158113644|gb|ABW15841.1| thymidylate kinase [Frankia sp. EAN1pec]
          Length = 241

 Score = 48.5 bits (114), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 18/193 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE- 61
           + ++ EG++GAGK T  S L   +            P     P   A R +L     DE 
Sbjct: 31  MIVAIEGVDGAGKNTLTSRLVEAVTATGRTAGTFAFPRYAAGPLGTAVRAMLDG---DER 87

Query: 62  -----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114
                  A A A++FA  R + +  + R  +    +L+ DR+L S+ AY   R     + 
Sbjct: 88  LAGLAGSARATALLFALDRANALPELAR-CVAAYDVLIVDRYLGSNAAYGAARLPAPERA 146

Query: 115 LFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FLD + E+ +  +    PD  ++LD+PV+      + R +   +  LD FE  D  +  
Sbjct: 147 EFLDWIAELELTRLGLPRPDLQVLLDVPVETARAGARARAAEDTARALDTFE-SDAGLQA 205

Query: 172 KRRQIFLDIARNQ 184
           +  +I+L +A + 
Sbjct: 206 RCAEIYLSLAADS 218


>gi|330836556|ref|YP_004411197.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374]
 gi|329748459|gb|AEC01815.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374]
          Length = 215

 Score = 48.5 bits (114), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 15/165 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG++G+G TT    +  +L      V  T EP G P     R  L    V      
Sbjct: 9   WIVLEGLDGSGTTTQSERICHWLDELEVPVIPTCEPTGGPIGRLIRSFLRKEAVT--TPL 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A A ++AA R DH+ N      +  K  +++ DR+  SS AYQ     S  +  +++  +
Sbjct: 67  AIAGLYAADRDDHLHNPQTGLALHHKDSLIISDRYFYSSLAYQ-----SVQVPFETVSMM 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           + +   P   I +D PV+I L R++ R      A  + FE K+ +
Sbjct: 122 N-RYPHPRYLIYIDTPVEICLARMKKR-----GAAQELFEYKEYL 160


>gi|313229292|emb|CBY23878.1| unnamed protein product [Oikopleura dioica]
          Length = 212

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG++ +GK+T I  +   +  K  +VH+TR P  T       +  L    D
Sbjct: 1   MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +A  ++F+A R +H ++++   +  G  +L DR+  S  A+     +++ L L+  
Sbjct: 61  -LSDQAIHLLFSANRWEHAQSILN-YMNNGTSVLVDRYAFSGVAFT----AAKGLDLEWC 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +        PD  + LD+  +   KR    + RY   E      F+R       + R+++
Sbjct: 115 KNPDRGLPKPDLVLQLDVDEETAKKRGGFGEERYEKVE------FQR-------QVRKLY 161

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224
             +     D   I+D++ S   +   + N V E ++    K +  L  K+D
Sbjct: 162 SQLREEHSDIWKIIDASASVDELTPALQNHVDETIKSCQNKDIEKLWIKRD 212


>gi|220918549|ref|YP_002493853.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956403|gb|ACL66787.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 567

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           + +SFEGI+G+GKT   +L+   L+    +V   RE G   T AA   R +     + E 
Sbjct: 1   MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  A     +E V+RPAL  G + + DR L S  A            +++   
Sbjct: 61  SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAIAGRGLPRAEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            +     PD  +++D  VD  L R++ R  
Sbjct: 121 AASGGTWPDLAVLVD--VDPDLARLRKRVG 148


>gi|159906007|ref|YP_001549669.1| dTMP kinase [Methanococcus maripaludis C6]
 gi|238686994|sp|A9AAR4|KTHY_METM6 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|159887500|gb|ABX02437.1| dTMP kinase [Methanococcus maripaludis C6]
          Length = 199

 Score = 48.5 bits (114), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 14/145 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G GKTT   L+   L  K      T EP      ++ R +L      +   E
Sbjct: 4   FIVFEGIDGCGKTTQAKLIAERLNAK-----FTFEPTDGKIGKSIREILSGSKCQK---E 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FAA R++HV   I   L +  I + DR++ SS  YQ     SQ +  D +  I+ 
Sbjct: 56  TLALLFAADRVEHVSK-IEEDLKKSHI-VSDRYVYSSIVYQ----MSQGIPKDFIYTIND 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150
               PD  ++LD+ ++  LKR+++R
Sbjct: 110 YAKTPDLVVLLDVDLNEALKRMESR 134


>gi|197123784|ref|YP_002135735.1| thymidylate kinase [Anaeromyxobacter sp. K]
 gi|196173633|gb|ACG74606.1| thymidylate kinase [Anaeromyxobacter sp. K]
          Length = 567

 Score = 48.1 bits (113), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 4/150 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           + +SFEGI+G+GKT   +L+   L+    +V   RE G   T AA   R +     + E 
Sbjct: 1   MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  A     +E V+RPAL  G + + DR L S  A            +++   
Sbjct: 61  SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            +     PD  +++D  VD  L R++ R  
Sbjct: 121 AASGGTWPDLAVLVD--VDPDLARLRKRVG 148


>gi|317056618|ref|YP_004105085.1| thymidylate kinase [Ruminococcus albus 7]
 gi|315448887|gb|ADU22451.1| thymidylate kinase [Ruminococcus albus 7]
          Length = 218

 Score = 48.1 bits (113), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 19/186 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LSCGVDE 61
            I  EG++G+GK+T    L  + + K+  +     P    P++   +  L   ++   + 
Sbjct: 5   LIVLEGLDGSGKSTQFEKLSEYFKNKDVKLKAISFPDYEDPSSTLVKMYLNGEIAGSAEA 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHL-F 116
             A A +  +A+ R    +        +G ++L  R++ S+  YQ     E +   +L +
Sbjct: 65  VNAYAASSFYASDRYISYKKYWEKDYNDGCLILAARYVTSNCIYQMTKLPEDEWENYLAW 124

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+  +   +    PD  I LD+P++I  + +  RY   ES       +KD  IHEK  + 
Sbjct: 125 LEDYEYCKLSLPKPDKVIFLDMPIEISQRLLSARYGGDES-------KKD--IHEKNIE- 174

Query: 177 FLDIAR 182
           FL + R
Sbjct: 175 FLHMCR 180


>gi|119953569|ref|YP_945779.1| thymidylate kinase [Borrelia turicatae 91E135]
 gi|119862340|gb|AAX18108.1| thymidylate kinase [Borrelia turicatae 91E135]
          Length = 202

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L++    K    + T+EP      E  R  L +   +     
Sbjct: 8   FYCIEGIDGSGKTSIIQKLQKLCNNK-LKYYFTKEPSQGVIGEFIRQQLTNFK-NPLRKV 65

Query: 66  AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108
           + A ++ A R +H+ N    I   L +GK  ++ DR+L SS AYQGE
Sbjct: 66  SLAYLYVADRYEHLYNTKNGIIEILNKGKTKVITDRYLFSSIAYQGE 112


>gi|116805956|emb|CAL26357.1| CG5757 [Drosophila melanogaster]
 gi|116805970|emb|CAL26364.1| CG5757 [Drosophila melanogaster]
 gi|223967375|emb|CAR93418.1| CG5757-PA [Drosophila melanogaster]
 gi|223967383|emb|CAR93422.1| CG5757-PA [Drosophila melanogaster]
          Length = 211

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P         N  + R     + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFDRICSK 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I NI  EL+ K
Sbjct: 171 EGSYFHQFDARQSVEDLHAQIANITEELLPK 201


>gi|288917903|ref|ZP_06412263.1| thymidylate kinase [Frankia sp. EUN1f]
 gi|288350692|gb|EFC84909.1| thymidylate kinase [Frankia sp. EUN1f]
          Length = 214

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 6/151 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAE 65
           I+  G++G+GKTT    L  +L  +          GG P  +A AR +  + G   FG  
Sbjct: 7   IALLGVDGSGKTTQARRLAVWLNGQGVPARYFENAGGRPIWDALARRLDRADGQALFGRR 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEIS 124
           A   V A+ R   V   +  + + G++ + DR+    YA    R D  +     + +   
Sbjct: 67  AYVAVEASMRWVAVSRALALSWLTGRVAVMDRYAYCQYAIMRARGDRGERRVRGAFRRFP 126

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                PD    L +P  +  +RV+ R   RE
Sbjct: 127 A----PDLVCYLSVPAGLAQRRVEQRGRDRE 153


>gi|258611590|ref|ZP_05233832.2| thymidylate kinase [Listeria monocytogenes FSL N3-165]
 gi|258601555|gb|EEW14880.1| thymidylate kinase [Listeria monocytogenes FSL N3-165]
          Length = 111

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 6/108 (5%)

Query: 99  LDSSYAYQGE-RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +DSS AYQG  RD +    L  +   ++++ +PD T  LD+P ++GL R+      RE  
Sbjct: 1   MDSSLAYQGAGRDMNMEQVL-QVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKG-REVN 58

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205
            LD   ++D+  HEK +  +  +    P+R   VD+  + + +   IL
Sbjct: 59  RLD---KEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETIL 103


>gi|150402215|ref|YP_001329509.1| thymidylate kinase [Methanococcus maripaludis C7]
 gi|166221755|sp|A6VFY2|KTHY_METM7 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|150033245|gb|ABR65358.1| dTMP kinase [Methanococcus maripaludis C7]
          Length = 199

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 14/145 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G GKTT   L+   L  K      T EP      ++ R +L      +   E
Sbjct: 4   FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREILSGSKCQK---E 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FAA R++HV  +     ++   ++ DR++ SS  YQ     SQ +  D +  I+ 
Sbjct: 56  TLALLFAADRVEHVSKIEED--LKKSHVVSDRYVYSSIVYQ----MSQGIPKDFIYTIND 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150
               PD  ++LD+ ++  LKR+++R
Sbjct: 110 YAKTPDLVVLLDVDLNEALKRMESR 134


>gi|218246100|ref|YP_002371471.1| dTMP kinase [Cyanothece sp. PCC 8801]
 gi|218166578|gb|ACK65315.1| dTMP kinase [Cyanothece sp. PCC 8801]
          Length = 207

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA----EAARHVLLSCGVD 60
           LFI  EGI+ AGK+T   LLK +   +     ++ EP   P      EA +  +++    
Sbjct: 4   LFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIKNK 63

Query: 61  EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E  A +FAA R  H+ N    V +    E   ++  R+  SS AY     ++Q  F
Sbjct: 64  HNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC---NTQEEF 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
            D +  ++ +   PD    +D+ +++ + R+ N  S RE
Sbjct: 121 -DFVAGLNQRFPNPDIVFYIDINLEVAISRLSNA-SFRE 157


>gi|226947280|ref|YP_002802371.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto]
 gi|226842994|gb|ACO85660.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto]
          Length = 231

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 10/149 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L  +N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVTENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQ 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +     ++
Sbjct: 61  RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLP 139
             FL+ L +   ++    +PDC I LD+P
Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149


>gi|269986147|gb|EEZ92460.1| thymidylate kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 202

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 20/155 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVL---LSCGV 59
           G  I  EGI+GAGK T   +LK  L+ +   V V   P  +    E  +  L   +   V
Sbjct: 3   GKLIVIEGIDGAGKATQAKILKEQLESQGKTVSVYSYPDYSSVYGERIKSFLYKKIDLKV 62

Query: 60  DEFGAEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           DE        +F    +D V+  N I   + +G  +L DRF  S+ AYQ    S+     
Sbjct: 63  DE--------LFMLYLIDMVKDRNRIIEDIKKGNDVLIDRFFFSTIAYQ----SAGGFSY 110

Query: 118 DSLQEISVQEVMPDCTII--LDLPVDIGLKRVQNR 150
           ++ +E      MP  T++  +++PVDI ++R + +
Sbjct: 111 ETGKEFVKLLGMPPITVVFYINVPVDISMQRKEKQ 145


>gi|321452944|gb|EFX64236.1| hypothetical protein DAPPUDRAFT_231894 [Daphnia pulex]
          Length = 209

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 21/223 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG + +GKTT      R+LQ  N + H+ R P  +    +  +  L C   E  
Sbjct: 5   GALIVLEGCDRSGKTTLCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECST-ELD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R + + + I+  L +G  ++ DR+  S  A+   +    ++ L   Q+ 
Sbjct: 64  DYAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSAAK---PNMDLRWCQQS 119

Query: 124 SVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               + PD  I LD+ PV+    + + +Y    S   +  E + V+     R  +L +  
Sbjct: 120 DSGLLKPDLVIFLDIDPVE---AQTRGQYG---SERYENLEMQKVV-----RSNYLKL-- 166

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
            Q +   +VD++ S + V  ++  +V E +   ++P S+ K +
Sbjct: 167 -QDESWKVVDASRSMEEVGRDVCRLVQEALDN-ITPDSALKQL 207


>gi|300932844|ref|ZP_07148100.1| thymidylate kinase [Corynebacterium resistens DSM 45100]
          Length = 220

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 16/169 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEG++GAGK T +S ++  L  +  ++ V R   G P  E + H  L+     +G 
Sbjct: 1   MIIAFEGVDGAGKNTLVSAVEAELLAR--EIPVARV--GFPRYEQSVHAQLAQAA-LYGQ 55

Query: 65  EAE--------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
             +        A +FA  R +  E++   +  +G ++L DRF+ S+ AY   R  S  + 
Sbjct: 56  MGDLLDSIHGMATMFALDRAEVAEDLASFS-EDGYVVLLDRFVASNAAYSTARLGSDSVA 114

Query: 116 -FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            ++  L+  S+   +PD  +++D+   +  +RV +R     S   D +E
Sbjct: 115 DWVYGLEFDSLGSPLPDLQVLVDVDATVAQQRVAHRADEDSSRAQDRYE 163


>gi|154285394|ref|XP_001543492.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
 gi|150407133|gb|EDN02674.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
          Length = 232

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 24/208 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGV 59
           G  I  EG++ AGK+T  + L++ LQ + ++V   R P  T   E  +    +++ +  +
Sbjct: 13  GALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRT--TEIGKLINGYLMQNAQL 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D+       ++F+A R +    + R  +  G  ++ DR+  S   Y   ++    L L+ 
Sbjct: 71  DDHSIH---LLFSANRWEAAAEIQRD-ISNGITVIIDRYSYSGAVYSAAKNIP-GLSLEW 125

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178
             +  +    PD  + L++  +   KR    Y +         ER +    + R RQ+F 
Sbjct: 126 AWQPEIGLPQPDIWLFLNISPEEAAKR--GGYGM---------ERYENDAFQTRIRQLFQ 174

Query: 179 D-IARNQPDRCHIVDSAHSFQSVATNIL 205
           + IAR  P+  H+VD+  +   VA +++
Sbjct: 175 ELIAREDPNNIHVVDAGRAESEVALDVI 202


>gi|320582782|gb|EFW96999.1| Thymidylate and uridylate kinase [Pichia angusta DL-1]
          Length = 210

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ I+ EG++  GKTT  S L   L +   D  + + P  T       +  L+    
Sbjct: 1   MTRGVLIAIEGLDRTGKTTQTSRLLERLDKSGVDATLIKFPERTTPIGRIINTYLTDKAF 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           E   ++  ++F+A R +  E  IR  L +GK ++ DR++ S  AY
Sbjct: 61  ELSDQSAHLLFSANRWELAEK-IRNLLEDGKTVVLDRYVYSGVAY 104


>gi|225557103|gb|EEH05390.1| thymidylate kinase [Ajellomyces capsulatus G186AR]
          Length = 232

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 24/208 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGV 59
           G  I  EG++ AGK+T  + L++ LQ + ++V   R P  T   E  +    +++ +  +
Sbjct: 13  GALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRT--TEIGKLINAYLMQNAQL 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D+       ++F+A R +    + R  +  G  ++ DR+  S   Y   ++    L L+ 
Sbjct: 71  DDHSIH---LLFSANRWEAAAEIQRD-ISNGITVIIDRYSYSGAVYSAAKNIP-GLSLEW 125

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178
             +  +    PD  + L++  +   KR    Y +         ER +    + R RQ+F 
Sbjct: 126 AWQPEIGLPQPDIWLFLNISPEEAAKR--GGYGM---------ERYENDAFQTRIRQLFQ 174

Query: 179 D-IARNQPDRCHIVDSAHSFQSVATNIL 205
           + +AR  P+  H+VD+  +   VA +++
Sbjct: 175 ELVAREDPNNVHVVDAGRAESEVALDVI 202


>gi|268611868|ref|ZP_06145595.1| putative thymidylate kinase [Ruminococcus flavefaciens FD-1]
          Length = 224

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 23/211 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++G+GK T  +LL   L+    +      P     +     + L     +  
Sbjct: 3   GKLIVIEGLDGSGKATQTALLCEKLKTLGVEFDHFSFPDYNSESSLLVRMYLDGKFGDNA 62

Query: 64  AE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQ 113
           AE    A +  FA  R        +     G I++CDR+  S+  +Q      GE D   
Sbjct: 63  AEVNPYAASCFFACDRYASFRTQWQDKYEGGHIIVCDRYTTSNAVHQCSKLPDGEWDDFV 122

Query: 114 HLFLD-SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +   D   ++I + E  PD  I L +  +IG + ++ RY+  E       ++KD  IHEK
Sbjct: 123 NWLFDFEYRKIGLPE--PDAVIYLRVDPEIGQELLKKRYNGDE-------KKKD--IHEK 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
                L+ +R   D C  +   H+ + V  N
Sbjct: 172 DED-HLNRSRLTADHCAKLYGWHTIECVNEN 201


>gi|195150817|ref|XP_002016347.1| GL10538 [Drosophila persimilis]
 gi|194110194|gb|EDW32237.1| GL10538 [Drosophila persimilis]
          Length = 211

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G    FEG +  GKTT   LL  FL+ K         P    +     +  L+   ++  
Sbjct: 7   GALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLT-NSNDLP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +++ N IR  L+ G  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAY----TAAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L    D  L R   +Y       L++         +K  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLKTASDNLLSR--GKYGEERYEKLEF--------QQKVAEVFNRICEQ 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H +D+  S   + T I  I  +L Q+
Sbjct: 171 ESSYWHQIDANQSVAEIHTQISGIAEKLQQQ 201


>gi|46130830|ref|XP_389146.1| hypothetical protein FG08970.1 [Gibberella zeae PH-1]
          Length = 270

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 15/186 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G FI  EG++ +GKTT + LL++    +   V V R P   TP  +   + L S    
Sbjct: 22  NRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDNYLKSN--V 79

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E       ++F+A R + V+  I+  L  G  +LCDR+  S   Y   + +   L L   
Sbjct: 80  EMDDHVIHLLFSANRWEAVKQ-IQSLLASGTTILCDRYYHSGIVYSAAKQNP-SLTLPWA 137

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  + LDL         + +   R     + +ER    + ++ R++F  +
Sbjct: 138 RAPERGLPRPDLVLFLDL--------TEEQAQARGGWGGEVYERSG--MQKRVRELFWGL 187

Query: 181 ARNQPD 186
           +    D
Sbjct: 188 SMGGKD 193


>gi|228905402|ref|ZP_04069357.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
 gi|228854222|gb|EEM98925.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
          Length = 328

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 20/189 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64
           I+ EGI+G+GKT  +SLL++ L+ K+ +V +   P             LS G +E  A  
Sbjct: 111 IAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLS-GNEEVNANN 169

Query: 65  ---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
              ++ ++ +A  R    EN      +    LL +RF  SS  YQ  R   +    F+  
Sbjct: 170 VDPKSMSLWYALDRWKEFEN---SNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQW 226

Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFERKDVMIHEKR 173
           + E+   ++    PD  I+ DL  +   K V N   R  + E A + Y E  D+M     
Sbjct: 227 IFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADV-YEESADIM--SNA 283

Query: 174 RQIFLDIAR 182
           R I+ D+A+
Sbjct: 284 RGIYQDLAK 292


>gi|227486952|ref|ZP_03917268.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227093026|gb|EEI28338.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 205

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 16/210 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS-CGVDE 61
           + ++ EGI+GAGK T   L++  L  K+ D      P    + AA+ AR  L    G   
Sbjct: 1   MILAVEGIDGAGKNT---LVRDLL--KHIDAETLSFPRYSTSDAAKLARKALYGRMGDMT 55

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFL 117
               A A +FA  R    E + + A  +  IL+ DR++ S+ AY   R    D++Q ++ 
Sbjct: 56  ESPYAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYD 115

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
               E+ + +  P   I+L+ P  +  +R ++R         D +E +D  +  +    +
Sbjct: 116 LEYGELGLPK--PALQILLETPASVAQERAESRARAERDRAKDTYE-QDSSLQVRTSVAY 172

Query: 178 LDIARNQ-PDRCHIVDSAHSFQSVATNILN 206
             +AR Q      IV    + Q     ILN
Sbjct: 173 RRLARGQWASPWLIVPHTTTPQEATEEILN 202


>gi|187918646|ref|YP_001884212.1| thymidylate kinase [Borrelia hermsii DAH]
 gi|119861494|gb|AAX17289.1| thymidylate kinase [Borrelia hermsii DAH]
          Length = 212

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L++    K    H T+EP      +  R  L +   +     
Sbjct: 18  FYCIEGIDGSGKTSIIQKLQKLCNNK-LKYHFTKEPSQGIIGKFIRKQLTNLK-NPLRRV 75

Query: 66  AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108
           + A ++AA R +H+ N    I   L +GK  ++ DR+L SS  YQGE
Sbjct: 76  SLAHLYAADRYEHLYNTKNGILEILNKGKTKVITDRYLFSSIVYQGE 122


>gi|291542136|emb|CBL15246.1| thymidylate kinase [Ruminococcus bromii L2-63]
          Length = 224

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 18/186 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LSCGVDEF 62
           I  EG++G+GK T   +L   +      V     P   +PAA   +  L        D+ 
Sbjct: 6   IVIEGLDGSGKATQTKILCEKISALGKKVTKLEFPNYESPAAAPVKMYLDGEFGDKPDDV 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSL 120
            A A +  +A  R+       +     G ++L DR++ S+  YQ  +   +    F+D L
Sbjct: 66  NAYAASAFYAVDRVASYLQFWKKECDNGGVILSDRYVTSNIIYQMSKLPKEEWNSFIDWL 125

Query: 121 QEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +   +++    PD  I LD+  ++  K ++ RY    S       +KD  +HEK  +  
Sbjct: 126 NDFEYEKLGIPKPDLVIYLDVEPEVSQKLMEKRYGGDNS-------KKD--LHEKNLRFL 176

Query: 178 LDIARN 183
           LD  ++
Sbjct: 177 LDCRKS 182


>gi|302531808|ref|ZP_07284150.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4]
 gi|302440703|gb|EFL12519.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4]
          Length = 571

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 30/213 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCGV 59
           + I+FEG+ GAGK+T   +L R L+   +  H T  P        P A A   +L + G 
Sbjct: 1   MLITFEGLPGAGKSTQSRMLARCLESNGH--HATVLPDLATLDTDPVAAALVDLLRTSG- 57

Query: 60  DEFGAEAEAI----VFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQ 113
           D F    +AI    + AA R D V  V+ PAL E    I++ DR + +  +Y       Q
Sbjct: 58  DPFLRSGDAITDTMITAAIRADLVATVLDPALAENPSAIVIEDRGIHTMASYAIAALLRQ 117

Query: 114 H-----LFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNR-------YSLRESACL 159
           H     + LD L  I+     P  T  + L +P  +  +R   R       ++  + A L
Sbjct: 118 HRAPAQVALDWLSSITAL-AGPRTTRALWLRMPPAVAARRAGERGGDHRPAFTGEQRAHL 176

Query: 160 DYFERKDVMIHEKRRQI-FLDIARNQPDRCHIV 191
            + +    ++ E+  Q+  LD A   P   H+ 
Sbjct: 177 AWVDHAYALLAERDPQLTVLDAADLDPVGIHLA 209


>gi|75761480|ref|ZP_00741445.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|74491041|gb|EAO54292.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
          Length = 228

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 20/189 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64
           I+ EGI+G+GKT  +SLL++ L+ K+ +V +   P             LS G +E  A  
Sbjct: 11  IAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLS-GNEEVNANN 69

Query: 65  ---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
              ++ ++ +A  R    EN      +    LL +RF  SS  YQ  R   +    F+  
Sbjct: 70  VDPKSMSLWYALDRWKEFEN---SNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQW 126

Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFERKDVMIHEKR 173
           + E+   ++    PD  I+ DL  +   K V N   R  + E A + Y E  D+M +   
Sbjct: 127 IFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADV-YEESADIMSN--A 183

Query: 174 RQIFLDIAR 182
           R I+ D+A+
Sbjct: 184 RGIYQDLAK 192


>gi|257470873|ref|ZP_05634963.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|317065075|ref|ZP_07929560.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|313690751|gb|EFS27586.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185]
          Length = 223

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 20/162 (12%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T    L +R L  K Y+V     P   +PA E  +  L      +
Sbjct: 2   GKLIVIEGTDSSGKETQTKKLFERLLAEK-YNVKKISFPNYDSPACEPVKMYLAG----K 56

Query: 62  FGAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A        ++++A  R    +        E  I++ DR++ S+  +Q  +   + 
Sbjct: 57  FGEDAMKVNPYPVSMMYAIDRYASYKMDWEKFYKEEGIIVTDRYVTSNMVHQASKIATED 116

Query: 112 SQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
            + ++LD L E+   ++    PD  I L++P ++ LK ++ R
Sbjct: 117 EKSVYLDWLDELEYDKMDIPRPDLIIFLNMPTEMALKLMEER 158


>gi|213422228|ref|ZP_03355294.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
          Typhi str. E01-6750]
          Length = 79

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 4/75 (5%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61
          +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L   S G + 
Sbjct: 5  YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62 FGAEAEAIVFAAARL 76
             +AE ++F AAR+
Sbjct: 65 ITDKAEVLMFYAARV 79


>gi|312140676|ref|YP_004008012.1| dtmp kinase [Rhodococcus equi 103S]
 gi|311890015|emb|CBH49333.1| dTMP kinase [Rhodococcus equi 103S]
          Length = 220

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 10/185 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T +  +   L+    DV     P  G +  A+ A   L     D  
Sbjct: 1   MLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDLS 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
               A A++FA  R    +  +R  +    +++ DR++ S+ AY   R  +     F+  
Sbjct: 61  ASVHAMAVMFALDRAGAADR-LRDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVGW 119

Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++ +    +    PD  + LD+PV +  +R + R +   S  LD +E KD  +  +  ++
Sbjct: 120 IENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYE-KDSGLQARTGEV 178

Query: 177 FLDIA 181
           + ++A
Sbjct: 179 YRELA 183


>gi|313246105|emb|CBY35059.1| unnamed protein product [Oikopleura dioica]
          Length = 212

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 26/231 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG++ +GK+T I  +   +  K  +VH+TR P  T       +  L    D
Sbjct: 1   MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +A  ++F+A R +H ++++   +  G  +L DR+  S  A+     +++ L L+  
Sbjct: 61  -LSDQAIHLLFSANRWEHAQSILN-YMNNGTSVLVDRYAFSGVAFT----AAKGLDLEWC 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +        PD  + LD+  +   KR    + RY   E      F+R       + R+++
Sbjct: 115 KNPDRGLPKPDLVLQLDVDEETAKKRGGFGEERYEKVE------FQR-------QVRKLY 161

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224
             +     D   I+D++ S   +   +   V E ++    K +  L  KKD
Sbjct: 162 SQLREEHSDIWKIIDASGSVDELTPALQTHVDETIKSCQNKDIEKLWIKKD 212


>gi|307202789|gb|EFN82074.1| Thymidylate kinase [Harpegnathos saltator]
          Length = 209

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 25/214 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG + AGK+T + LL   L  ++     +  P          +  LS  ++   
Sbjct: 6   GALIVLEGCDRAGKSTQVKLLTNALNERSIPTKASAFPNRNTPIGGLLNGFLSKEIN-IP 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EA  ++F+A R +  E+ I   L+ G  L+ DR+  S  AY     ++    L+  ++ 
Sbjct: 65  PEAAHLLFSANRWECKED-IEKMLLSGTTLVIDRYASSGTAYTA---ANTGRCLNWCKQP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PDC ++        LK  +++  LR +   + FE+ D+ +     ++  +  + 
Sbjct: 121 DLGLPKPDCVML--------LKVSKHQQELRNNWGEERFEQNDLQV-----RVSANYEKL 167

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + D    VD+         N+L I  E+++K +S
Sbjct: 168 KDDTWMTVDADQ-------NVLTIHGEILKKALS 194


>gi|269797674|ref|YP_003311574.1| thymidylate kinase [Veillonella parvula DSM 2008]
 gi|269094303|gb|ACZ24294.1| thymidylate kinase [Veillonella parvula DSM 2008]
          Length = 228

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+    EFG
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114
            +   +       ++A  R              G I++ DR+  S+  +Q  +  DS + 
Sbjct: 59  KDVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDSKER 118

Query: 115 L-FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD---V 167
             FLD L++   Q+     PD   +LD+P+++    +  R         D  E      V
Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEGNHTYLV 178

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
            +H+   ++   + R Q  R   VD A S Q     I  I
Sbjct: 179 AVHDAYEEL---VKRYQWHRIPCVDKAKSSQYTLRTIEEI 215


>gi|257059151|ref|YP_003137039.1| thymidylate kinase [Cyanothece sp. PCC 8802]
 gi|256589317|gb|ACV00204.1| thymidylate kinase [Cyanothece sp. PCC 8802]
          Length = 207

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA----EAARHVLLSCGVD 60
           LFI  EGI+ AGK+T   LLK +   +     ++ EP   P      EA +  +++    
Sbjct: 4   LFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIKNK 63

Query: 61  EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E  A +FAA R  H+ N    V +    E   ++  R+  SS AY     ++Q  F
Sbjct: 64  HNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC---NTQEEF 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
            D +  ++ +   PD    +D+ +++ + R+ N
Sbjct: 121 -DFVAGLNQRFPNPDIVFYIDINLEVAISRLSN 152


>gi|227826764|ref|YP_002828543.1| thymidylate kinase related protein [Sulfolobus islandicus
          M.14.25]
 gi|229583934|ref|YP_002842435.1| thymidylate kinase related protein [Sulfolobus islandicus
          M.16.27]
 gi|238618863|ref|YP_002913688.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4]
 gi|227458559|gb|ACP37245.1| thymidylate kinase related protein [Sulfolobus islandicus
          M.14.25]
 gi|228018983|gb|ACP54390.1| thymidylate kinase related protein [Sulfolobus islandicus
          M.16.27]
 gi|238379932|gb|ACR41020.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4]
 gi|323476500|gb|ADX81738.1| thymidylate kinase [Sulfolobus islandicus HVE10/4]
          Length = 205

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60
          + I+FEGIEG+GKT+H+   K++L+++ Y V        +  G    +  R+++      
Sbjct: 1  MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIV------ 54

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
           F      + +     D +EN + P++  G I L D +
Sbjct: 55 -FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 91


>gi|227829398|ref|YP_002831177.1| thymidylate kinase related protein [Sulfolobus islandicus
          L.S.2.15]
 gi|229578186|ref|YP_002836584.1| thymidylate kinase related protein [Sulfolobus islandicus
          Y.G.57.14]
 gi|284996769|ref|YP_003418536.1| thymidylate kinase related protein [Sulfolobus islandicus
          L.D.8.5]
 gi|227455845|gb|ACP34532.1| thymidylate kinase related protein [Sulfolobus islandicus
          L.S.2.15]
 gi|228008900|gb|ACP44662.1| thymidylate kinase related protein [Sulfolobus islandicus
          Y.G.57.14]
 gi|284444664|gb|ADB86166.1| thymidylate kinase related protein [Sulfolobus islandicus
          L.D.8.5]
          Length = 205

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60
          + I+FEGIEG+GKT+H+   K++L+++ Y V        +  G    +  R+++      
Sbjct: 1  MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIV------ 54

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
           F      + +     D +EN + P++  G I L D +
Sbjct: 55 -FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 91


>gi|240277647|gb|EER41155.1| thymidylate kinase [Ajellomyces capsulatus H143]
 gi|325093734|gb|EGC47044.1| thymidylate kinase [Ajellomyces capsulatus H88]
          Length = 232

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGV 59
           G  I  EG++ AGK+T  + L++ LQ + ++V   R P  T   E  +    +++ +  +
Sbjct: 13  GALIVLEGLDRAGKSTQCASLQKTLQEEGHEVKYRRFPDRT--TEIGKLINAYLMQNAQL 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D+       ++F+A R +    + R  +  G  ++ DR+  S   Y   ++    L L+ 
Sbjct: 71  DDHSIH---LLFSANRWEAAAEIQRD-ISNGITVIIDRYSYSGAVYSAAKNIP-GLSLEW 125

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178
             +  +    PD  + L++  +   KR    Y +         ER +    + R RQ+F 
Sbjct: 126 AWQPEIGLPQPDIWLFLNISPEEAAKR--GGYGM---------ERYENDAFQTRIRQLFQ 174

Query: 179 D-IARNQPDRCHIVDSAHSFQSVATNIL 205
           + +AR  P+  H+VD++ +   VA +++
Sbjct: 175 ELVAREDPNNVHVVDASRAESEVALDVI 202


>gi|223967381|emb|CAR93421.1| CG5757-PA [Drosophila melanogaster]
 gi|223967389|emb|CAR93425.1| CG5757-PA [Drosophila melanogaster]
 gi|223967393|emb|CAR93427.1| CG5757-PA [Drosophila melanogaster]
          Length = 211

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P         N  + R     + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRSP--------PNDLTYRGQYGKERYEK--VEFQGRVAEVFDRICSK 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I +I  EL+ K
Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|288919199|ref|ZP_06413537.1| thymidylate kinase [Frankia sp. EUN1f]
 gi|288349446|gb|EFC83685.1| thymidylate kinase [Frankia sp. EUN1f]
          Length = 223

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 17/215 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ---RKNYDVHVTREPGGTPAAEAARHVLLS----C 57
           + ++ EG++GAGK T  S L   L    R        R   G P   A R +L       
Sbjct: 1   MIVAIEGVDGAGKHTLTSRLVEALTAAGRTAATFSFPRYTAG-PLGTAVRAMLDGDERLA 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115
           GV    A A A++FA  R + +  +   A  E  +LL DR+L S+ AY   R  +     
Sbjct: 60  GV-AGSARATALLFALDRANALPELAARA-AEHDVLLVDRYLASNAAYGAARLPADERPD 117

Query: 116 FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FL  + E+ +  +    PD  ++LD+PV+      + R +   +  LD FER D  + E+
Sbjct: 118 FLAWIAELELTALRLPRPDLQVLLDVPVETARAAARQRAAGDATRALDTFER-DEGLQER 176

Query: 173 RRQIFLDIARNQPDRCHIV-DSAHSFQSVATNILN 206
              I+  +A +      IV D A   ++V   +L+
Sbjct: 177 CAGIYRHLAADGWVAPWIVADRATGAEAVLDALLS 211


>gi|72392763|ref|XP_847182.1| thymidylate kinase [Trypanosoma brucei TREU927]
 gi|62359227|gb|AAX79670.1| thymidylate kinase, putative [Trypanosoma brucei]
 gi|70803212|gb|AAZ13116.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 345

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGT-PAAEAARHVLLSCGVDEFGA 64
           I F G +GAGK T    +++ L ++    H + + P       +  R VL        G 
Sbjct: 131 IVFGGGDGAGKATQTEYMRKRLDKEG-KAHASLDFPSDKHRYGKLIRKVLSGERGALHGL 189

Query: 65  EAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSL 120
           + +  +++F+  R D +   +R  L  GK +L DR+  S++ +Q  +  +S +  F+  L
Sbjct: 190 DPKLFSLLFSLNRFDTLPE-LRYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHL 248

Query: 121 QEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +++ ++ +    PD  + LDLP    L  +Q R   RES  LD  E   +   E  RQ +
Sbjct: 249 EQLELEWLKLPPPDVALYLDLPPAAALVAMQ-RDEKRES--LDIHETAGLSYKENVRQTY 305

Query: 178 LDIARNQPDRCHI 190
           +   +NQ +   I
Sbjct: 306 VWCCQNQRNWVQI 318


>gi|289676128|ref|ZP_06497018.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5]
          Length = 225

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 10/145 (6%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCG-V 59
           G  I  EGI+G+GK T    +LK FL        ++    G    A E A ++    G +
Sbjct: 2   GKIIVVEGIDGSGKNTQTDKMLKAFLSSGVEASKISFPQYGKTFFAKEVASYLNGEFGSI 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-----H 114
           ++   +  A+++A  R +  E ++  +  +  +L+CDR++ S+ A+Q  + S +      
Sbjct: 62  EQISPKLSAMLYAGDRFECKEEIVNKSTRDS-VLICDRYVYSNVAHQIAKVSDEDRNELR 120

Query: 115 LFLDSLQEISVQEVMPDCTIILDLP 139
            ++++L+    +   PD TI LD+P
Sbjct: 121 EWIEALEFDVYKLPRPDLTIFLDVP 145


>gi|20093541|ref|NP_613388.1| thymidylate kinase [Methanopyrus kandleri AV19]
 gi|73920824|sp|Q8TZ38|KTHY_METKA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|19886382|gb|AAM01318.1| Thymidylate kinase [Methanopyrus kandleri AV19]
          Length = 194

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 26/164 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL++  EGI+G GK++ ++L   FL+    +V   REP      EA         ++   
Sbjct: 2   GLYLGVEGIDGVGKSSVVNLAAEFLEIHGLEVTTVREPSTDIGREA---------LEWDD 52

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +A+ F    LD +  + R       ++L DR   S+ AYQ    +     L+  + +
Sbjct: 53  PYLQALAFT---LDRMLTLKRVDFEAADVVLSDRTFLSTLAYQSALGADMRWLLELQRPV 109

Query: 124 SVQEVMPDCTIILD---LPVDIG-----LKRVQNRYSLRESACL 159
                 PD   I+D   L  D       L+RV+NRY  RE+A L
Sbjct: 110 P----KPDVVYIIDREPLAEDATFDKEFLERVRNRY--REAARL 147


>gi|323473846|gb|ADX84452.1| thymidylate kinase related protein [Sulfolobus islandicus REY15A]
          Length = 205

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 11/98 (11%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60
          + I+FEGIEG+GKT+H+   K++L+++ Y +        +  G    +  R+++      
Sbjct: 1  MIIAFEGIEGSGKTSHLEATKKYLEKQGYGIITFGLQKSKLLGERITQVKRNIV------ 54

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
           F      + +     D +EN + P++  G I L D +
Sbjct: 55 -FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 91


>gi|116805978|emb|CAL26368.1| CG5757 [Drosophila simulans]
          Length = 211

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P +     + NR    E    + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRAPSN----DLTNRGQYGE----ERYEK--VEFQSRVAEVFDRICSK 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I +I  EL+ K
Sbjct: 171 EASYFHKFDATQSVEDLHAQIGSITEELLPK 201


>gi|40215537|gb|AAL48064.2| RE69454p [Drosophila melanogaster]
          Length = 225

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 21  GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 79

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 80  DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAY----SAAKGLDFDWCYAP 134

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P         N  + R     + +E+  V    +  ++F  I   
Sbjct: 135 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFNRICSK 184

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I +I  EL+ K
Sbjct: 185 EGSYFHQFDARQSVEDLHAQIASITEELLPK 215


>gi|28573735|ref|NP_611290.3| CG5757 [Drosophila melanogaster]
 gi|28380736|gb|AAF57756.2| CG5757 [Drosophila melanogaster]
 gi|220949114|gb|ACL87100.1| CG5757-PA [synthetic construct]
 gi|220958186|gb|ACL91636.1| CG5757-PA [synthetic construct]
 gi|223967371|emb|CAR93416.1| CG5757-PA [Drosophila melanogaster]
 gi|223967373|emb|CAR93417.1| CG5757-PA [Drosophila melanogaster]
 gi|223967377|emb|CAR93419.1| CG5757-PA [Drosophila melanogaster]
 gi|223967379|emb|CAR93420.1| CG5757-PA [Drosophila melanogaster]
 gi|223967385|emb|CAR93423.1| CG5757-PA [Drosophila melanogaster]
 gi|223967387|emb|CAR93424.1| CG5757-PA [Drosophila melanogaster]
 gi|223967391|emb|CAR93426.1| CG5757-PA [Drosophila melanogaster]
          Length = 211

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAY----SAAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P         N  + R     + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFNRICSK 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I +I  EL+ K
Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|39960728|ref|XP_364612.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15]
 gi|145010950|gb|EDJ95606.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15]
          Length = 240

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 35/230 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ +GKTT + LL KRFL     +V V R P  T          L   VD  
Sbjct: 13  GALIVLEGLDRSGKTTQVQLLEKRFLD-LGRNVKVMRFPDRTTPIGQMIDGYLKSQVD-M 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +  +  I   L  G  +LCDR+  S   Y   + +   L L   + 
Sbjct: 71  DDHVIHLLFSANRWEAAKQ-ITDLLSAGTTVLCDRYYYSGMVYSAAKQNPA-LPLSWARA 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V    PD  + LDL         + +   R     + +ER +  +  + R++F  ++ 
Sbjct: 129 PEVGLPRPDLVLFLDL--------TEEQAKARGGWGDELYERAE--MQRRVRELFWGLSM 178

Query: 183 NQPDR----------------CHIVDSAHSFQSVATNILNIVWELVQKRV 216
            + +                  H+VD++ S ++V   I    W++V+ RV
Sbjct: 179 GRIEAGGGSQREERARQEEEDLHVVDASPSVEAVCEEI----WKVVEPRV 224


>gi|256374448|ref|YP_003098108.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
 gi|255918751|gb|ACU34262.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
          Length = 710

 Score = 45.8 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 10/137 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL I+ EG      +     L   L+   ++V +  EP      E   H LL+   D  G
Sbjct: 480 GLLITVEGDASLDTSVQARELAEVLRSAGHEVLLASEPD---LDERRVHELLNTA-DLAG 535

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSL 120
             A A+V AA R D VE  +RPAL  G I++ DRF DS  A+    G  D+S+   L+ L
Sbjct: 536 VRAHALVAAAVRADVVERRVRPALEAGLIVVVDRFADSPIAHFSASGSVDTSE---LERL 592

Query: 121 QEISVQEVMPDCTIILD 137
            + +   + PD T++LD
Sbjct: 593 SDWATGRLRPDLTVLLD 609


>gi|195027421|ref|XP_001986581.1| GH20447 [Drosophila grimshawi]
 gi|193902581|gb|EDW01448.1| GH20447 [Drosophila grimshawi]
          Length = 211

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 17/221 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG + +GKTT    L   L  K  D+     P  T       +  L+    +  
Sbjct: 7   GAFIVFEGCDRSGKTTQSRHLSSVLTSKGVDIKQINFPDRTTTIGGMINAYLT-NTQDLK 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R + V++ I+  L+ G  ++CDR+  S  AY     +++ +  D     
Sbjct: 66  DEVIHLLFSANRWECVDS-IKKDLLAGTTVICDRYSYSGAAYS----AAKGVDFDWCCAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L   +D     + +R S  E    + +E+ D     K  + F  +   
Sbjct: 121 DRGLLEPDAVFYLKANLD----ELTSRGSYGE----ERYEKLD--FQRKVGEQFDRLYAQ 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV-SPLSSKK 223
           +    H++D++ S Q +   I  +   ++Q+    PLS+ K
Sbjct: 171 RSSYWHLLDASKSLQELQDQIAAVADGVLQQAAEQPLSTIK 211


>gi|171204|gb|AAA34486.1| CDC8 gene [Saccharomyces cerevisiae]
          Length = 216

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 2   MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDTF 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + V+  I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 59  QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V  + PD T+ L           Q+  +  E +       + V   EK +Q F+ +
Sbjct: 117 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 167

Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217
                R   +   IVD +    Q V      ++W++V+  +S
Sbjct: 168 LDKEIRKGDESITIVDVTNKGIQEVEA----LIWQIVEPVLS 205


>gi|116805958|emb|CAL26358.1| CG5757 [Drosophila melanogaster]
          Length = 211

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P         N  + R     + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFDRICSK 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I +I  EL+ K
Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|58265708|ref|XP_570010.1| thymidylate kinase [Cryptococcus neoformans var. neoformans JEC21]
 gi|57226242|gb|AAW42703.1| thymidylate kinase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 217

 Score = 45.8 bits (107), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 27/218 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG++  GK+T +  L + L+R+ +   + + P  T          L     E  
Sbjct: 7   GAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPERTTQIGKMIDAYLQSKT-EID 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     IR  L  G  ++ DR+  S  A+     +++ L  D     
Sbjct: 66  DHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFS----AAKGLPFDFCLHP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                +PD T+ L LP +   KR    + RY             + V I +  RQ F  +
Sbjct: 121 DAGLPLPDVTLYLTLPPETAAKRSAYGEERY-------------ESVSIQQAVRQQFKLV 167

Query: 181 A-----RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A     R+  D+   +++  +F+ V   I + + ++V+
Sbjct: 168 ANEIKKRHGADKWIEIEADGTFEDVEERIWSQISDVVE 205


>gi|125808374|ref|XP_001360729.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
 gi|54635901|gb|EAL25304.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
          Length = 211

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G    FEG +  GKTT   LL  FL+ K         P    +     +  L+   ++  
Sbjct: 7   GALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLT-NSNDLP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +++ N IR  L+ G  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAY----TAAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L    D  L R   +Y       L++         +K  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLKTASDNLLSR--GKYGEERYEKLEF--------QQKVAEVFNRICEQ 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H +D+      + T I  I  +L Q+
Sbjct: 171 ESSYWHQIDANQPVAEIHTQISGIAEKLQQQ 201


>gi|195584457|ref|XP_002082023.1| GD25418 [Drosophila simulans]
 gi|194194032|gb|EDX07608.1| GD25418 [Drosophila simulans]
          Length = 211

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P +     + NR    E    + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRAPSN----DLTNRGQYGE----ERYEK--VEFQGRVAEVFDRICSK 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I +I  EL+ K
Sbjct: 171 EASYFHKFDATQSVEDLHAQIGSITEELLPK 201


>gi|68067163|ref|XP_675552.1| thymidylate kinase [Plasmodium berghei strain ANKA]
 gi|56494802|emb|CAH95718.1| thymidylate kinase, putative [Plasmodium berghei]
          Length = 218

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 13/140 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDE 61
           G FI FEG++ +GK+T   LL   L+  N  V     P    T     A ++ +      
Sbjct: 15  GNFIVFEGVDRSGKSTQSKLLVEHLKNNNIQVQYLCFPNRETTIGKIIANYLKME---ST 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F  E   ++F+A R + ++  I+  L+ G  ++CDR     YAY G   SS  L L    
Sbjct: 72  FSNETIHLLFSANRWEMMDQ-IKNLLINGIWVICDR-----YAYSGVAYSSGALKLPKEW 125

Query: 122 EISVQE--VMPDCTIILDLP 139
            ++  +  + PD    L++P
Sbjct: 126 CMNPDKGLIKPDAVCYLNVP 145


>gi|291166624|gb|EFE28670.1| dTMP kinase [Filifactor alocis ATCC 35896]
          Length = 226

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 18/161 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG +G+GK T  +LL ++L  +     +   P   +P++   +  L      EF
Sbjct: 3   GKLIVIEGTDGSGKETQSNLLYQYLSDRGIPCRIVHFPNYNSPSSSLVKMYL----AGEF 58

Query: 63  GAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS 112
           G EA+       +I +A  R    +        +G +++ DR++ S+  +Q  +      
Sbjct: 59  GTEADSVSPYIASIFYAGDRYASWKTDWMSFYEQGGVVIVDRYVMSNLIHQASKLKTTEE 118

Query: 113 QHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           ++ F D L ++         PD TI L + +D+    ++ R
Sbjct: 119 KNQFRDWLYDLEYHIFSLPKPDMTIFLHVDIDVTFALMKER 159


>gi|330835059|ref|YP_004409787.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina
           Ar-4]
 gi|329567198|gb|AEB95303.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina
           Ar-4]
          Length = 211

 Score = 45.4 bits (106), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 16/149 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCGV 59
           G  I+ EGI+G+GK++   LLK +L+ K  D ++T             EA +  LL+   
Sbjct: 3   GHIIAMEGIDGSGKSSQAKLLKDWLENK-VDTYLTEWNSSDWIHEVIKEAKKKNLLT--- 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                   +++ A    D  E +I P    G  ++ DR+  +++A    RDS + + ++ 
Sbjct: 59  ----PLTFSLIHATDFADRYERLILPMYRIGFTVVSDRYFYTAFA----RDSVRGVNINW 110

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQ 148
           ++++    + PD T  + +  ++ L R++
Sbjct: 111 VRQLYSYAMKPDVTFFIRVTPEVALARLR 139


>gi|134109297|ref|XP_776763.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259443|gb|EAL22116.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 217

 Score = 45.4 bits (106), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 27/218 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG++  GK+T +  L + L+R+ +   + + P  T          L     E  
Sbjct: 7   GAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPDRTTQIGKMIDAYLQSKT-EID 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     IR  L  G  ++ DR+  S  A+     +++ L  D     
Sbjct: 66  DHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFS----AAKGLPFDFCLHP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                +PD T+ L LP +   KR    + RY             + V I +  RQ F  +
Sbjct: 121 DAGLPLPDVTLYLTLPPETAAKRSAYGEERY-------------ESVSIQQAVRQQFKLV 167

Query: 181 A-----RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A     R+  D+   +++  +F+ V   I + +  +V+
Sbjct: 168 ANEIKNRHGSDKWIEIEADGTFEDVEERIWSQISNVVE 205


>gi|57167762|ref|ZP_00366902.1| thymidylate kinase [Campylobacter coli RM2228]
 gi|57020884|gb|EAL57548.1| thymidylate kinase [Campylobacter coli RM2228]
          Length = 185

 Score = 45.4 bits (106), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 11/148 (7%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
           GK+T ISLLK   +   +    T EPGGT      R +LL     +   + E ++F A R
Sbjct: 5   GKSTQISLLKECFKEAVF----TAEPGGTKLGNHLRELLLYKPY-QLDKKTELLLFLADR 59

Query: 76  LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTII 135
             H E +++    + K+++ DR   S  AY  + ++ +   L  L   +++   P   I 
Sbjct: 60  AQHCEEILKAN--QDKLIISDRSFISGMAYAKDFENEE---LFRLNAFALENFFPQKVIF 114

Query: 136 LDLPVDIGLKRV-QNRYSLRESACLDYF 162
           L    ++  +R+ Q      E   +DYF
Sbjct: 115 LKGDENLIKERLSQKEQDAIEKRGIDYF 142


>gi|116805954|emb|CAL26356.1| CG5757 [Drosophila melanogaster]
 gi|116805960|emb|CAL26359.1| CG5757 [Drosophila melanogaster]
 gi|116805962|emb|CAL26360.1| CG5757 [Drosophila melanogaster]
 gi|116805964|emb|CAL26361.1| CG5757 [Drosophila melanogaster]
 gi|116805966|emb|CAL26362.1| CG5757 [Drosophila melanogaster]
 gi|116805968|emb|CAL26363.1| CG5757 [Drosophila melanogaster]
 gi|116805972|emb|CAL26365.1| CG5757 [Drosophila melanogaster]
 gi|116805974|emb|CAL26366.1| CG5757 [Drosophila melanogaster]
 gi|116805976|emb|CAL26367.1| CG5757 [Drosophila melanogaster]
          Length = 211

 Score = 45.4 bits (106), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P         N  + R     + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRSP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFDRICSK 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    H  D+  S + +   I +I  EL+ K
Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|183220659|ref|YP_001838655.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Paris)']
 gi|189910761|ref|YP_001962316.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167775437|gb|ABZ93738.1| Thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167779081|gb|ABZ97379.1| Thymidylate kinase (dTMP kinase) [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 203

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 8/153 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F  FEGI+G+GKTT    +   L  K+      REP  +   +  R  L   G  +   +
Sbjct: 7   FFVFEGIDGSGKTTVSKKVSEILSTKSISNLWHREPTDSIHGQKIREFL--QGKIKLTPD 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            +  +F   R   V   I P L     L+ DR+  S+ AYQG  E  ++  L+++  +  
Sbjct: 65  EQLKLFLLDREFSVNETILPTLKSDTCLVQDRYYFSTAAYQGRDEEHAADILYMNEDKGF 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
                 P+    LDL  +  L+R   R   +E+
Sbjct: 125 P----EPNRVYFLDLSPEEALERRNTRGGNKEA 153


>gi|225020669|ref|ZP_03709861.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680065|ref|ZP_07402875.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266]
 gi|224946615|gb|EEG27824.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660685|gb|EFM50182.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266]
          Length = 208

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 7/166 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   + I+ EGI+GAGKTT ++ L+  L  +   +   R      A    R +    G  
Sbjct: 1   MIENMIIAIEGIDGAGKTTLLATLREQLHAEV--IAFPRYETSIHAQLVRRALYQQMGDL 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A A +FA  R +  E ++ P +    +++ DR++ S+ AY   R   + + +D +
Sbjct: 59  TDSVYAMATLFALDRHEARE-LLHPFVASNALVVLDRYVASNAAYSWARTGDETI-IDWV 116

Query: 121 QEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            E+    +    PD  + L+   D+  +R  NR  L      D +E
Sbjct: 117 AELEFNTLGVPRPDLQVFLNTTPDVAGQRAINREKLDRDRARDSYE 162


>gi|269860112|ref|XP_002649779.1| thymidylate kinase [Enterocytozoon bieneusi H348]
 gi|220066838|gb|EED44309.1| thymidylate kinase [Enterocytozoon bieneusi H348]
          Length = 205

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 23/188 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-------AEAARHVL 54
           N  LFI  EGI+ +GKTT  +L+ + +    ++        G           E   ++ 
Sbjct: 5   NKNLFIVLEGIDRSGKTTLCNLISKKINAVKFNFPDRTTNTGKKIDNFLKQYCENVENIF 64

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
            +  ++E       ++F   RL+ +  +++   +E   ++CDR+  S   Y   +  ++ 
Sbjct: 65  DNKEINE----KLHLLFRDNRLEKIPFILKT--LENHDIICDRYSMSGIVYSISKGLNEK 118

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKR------VQNRYSLRESACLDYFERKDVM 168
              DS +++ +    PD T  LD+  +I  KR      + +    ++    +Y + KD M
Sbjct: 119 WVKDSEKDLPI----PDITFFLDVNPEISFKRQDFGNEIHDTIEFQKKVYENYLKNKDYM 174

Query: 169 IHEKRRQI 176
           I  K   I
Sbjct: 175 IFIKNDTI 182


>gi|167948232|ref|ZP_02535306.1| thymidylate kinase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 78

 Score = 45.4 bits (106), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           ++LDLPV++GL R   R      +  D FE +     ++ RQ +L IA +QP+R  ++D+
Sbjct: 1   MLLDLPVEVGLARAGQR------SAPDRFESEQQHFFQRVRQGYLQIAADQPERVRLIDA 54

Query: 194 AHSFQSVATNILNIVWELVQK 214
           +     V   I   +   +Q+
Sbjct: 55  SLPLAQVQQQISRELERFIQR 75


>gi|70984984|ref|XP_747998.1| thymidylate kinase [Aspergillus fumigatus Af293]
 gi|66845626|gb|EAL85960.1| thymidylate kinase [Aspergillus fumigatus Af293]
 gi|159126077|gb|EDP51193.1| thymidylate kinase [Aspergillus fumigatus A1163]
          Length = 221

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 16/215 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G  I FEG++ AGK++    L+  LQ   + V   R P   TP  +     L   G  
Sbjct: 6   NRGALIVFEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + +   I   +  G  ++ DR+  S   Y   +  + +L L+  
Sbjct: 64  QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNPNLSLEWA 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD  + L +  +   K        R    ++ +E +   +  + R++F  +
Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAK--------RGGFGVERYENE--TMQNRVRELFQTL 171

Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               Q D  H +D+  SF +V+ +I+ IV + + +
Sbjct: 172 FDLQQGDYIHTIDAGRSFDAVSQDIMKIVTDYIGR 206


>gi|218906650|ref|YP_002454484.1| thymidylate kinase, putative [Bacillus cereus AH820]
 gi|218535113|gb|ACK87511.1| thymidylate kinase, putative [Bacillus cereus AH820]
          Length = 328

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 20/189 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64
           I+ EGI+G+GKT  +SLL+  L+ K+  V +   P             LS G +E  A  
Sbjct: 111 IAVEGIDGSGKTVQMSLLEEQLKEKDKQVIIKSFPVYDSFFGKNIGQFLS-GNEEVNANN 169

Query: 65  ---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
              ++ ++ +A  R    EN      +    LL +RF  SS  YQ  R   +    F+  
Sbjct: 170 VDPKSMSLWYALDRWKEFENF---NYINYDYLLLNRFTLSSAVYQSSRVEPELREEFIQW 226

Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFERKDVMIHEKR 173
           + E+   ++    PD  I+ DL  +   K V N   R  + E A + Y E  D+M     
Sbjct: 227 IFELEHSQLGLPSPDLYIVFDLNAETSKKNVSNKGFRDYVGEKADV-YEESADIM--SNA 283

Query: 174 RQIFLDIAR 182
           R I+ D+A+
Sbjct: 284 RGIYQDLAK 292


>gi|323304253|gb|EGA58027.1| Cdc8p [Saccharomyces cerevisiae FostersB]
          Length = 215

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRXGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + V+  I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V  + PD T+ L           Q+  +  E +       + V   EK +Q F+ +
Sbjct: 116 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 166

Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217
                R   +   IVD +    Q V      ++W++V+  +S
Sbjct: 167 LDKEIRKGDESITIVDVTNKDIQEVEA----LIWQIVEPVLS 204


>gi|19551980|ref|NP_599982.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032]
 gi|62389641|ref|YP_225043.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032]
 gi|145294916|ref|YP_001137737.1| thymidylate kinase [Corynebacterium glutamicum R]
 gi|21323519|dbj|BAB98146.1| Thymidylate kinase [Corynebacterium glutamicum ATCC 13032]
 gi|41324976|emb|CAF19457.1| THYMIDYLATE KINASE, PUTATIVE [Corynebacterium glutamicum ATCC
           13032]
 gi|140844836|dbj|BAF53835.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 203

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 15/203 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + +S EGI+GAGK T +S L + +  K   +   R      A  AA  +    G     A
Sbjct: 1   MIVSIEGIDGAGKNTLVSALTQVIDAKV--LAFPRYETSIHAQLAAEALHGRMGDLTDSA 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122
            A A +FA  R   ++++  P      ++L DR++ S+ AY   R  D     ++  L+ 
Sbjct: 59  YAMATLFALDRHFAIDDLNAPG-----VVLLDRYVASNAAYTAARLLDDDAPRWVADLEF 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    P   ++LD P ++   R + R +L  +   D +E  D  + ++  + +  +A 
Sbjct: 114 GRLGLPRPTLQVLLDTPAEVAQDRARRREALDSARARDRYE-SDSALQQRTAEHYRRLAA 172

Query: 183 NQPDRCHIV-----DSAHSFQSV 200
           +  +   IV     D  H  Q +
Sbjct: 173 DNWESPWIVVAPDEDPGHVAQRI 195


>gi|6322517|ref|NP_012591.1| Cdc8p [Saccharomyces cerevisiae S288c]
 gi|1170719|sp|P00572|KTHY_YEAST RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|3318768|pdb|2TMK|A Chain A, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
           Deoxythymidine Monophosphate (Azt-Mp)
 gi|3318769|pdb|2TMK|B Chain B, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
           Deoxythymidine Monophosphate (Azt-Mp)
 gi|3318847|pdb|1TMK|A Chain A, Yeast Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Dtmp)
 gi|3318848|pdb|1TMK|B Chain B, Yeast Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Dtmp)
 gi|4558230|pdb|3TMK|A Chain A, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558231|pdb|3TMK|B Chain B, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558232|pdb|3TMK|C Chain C, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558233|pdb|3TMK|D Chain D, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558234|pdb|3TMK|E Chain E, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558235|pdb|3TMK|F Chain F, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558236|pdb|3TMK|G Chain G, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558237|pdb|3TMK|H Chain H, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|172971|gb|AAB05644.1| thymidylate kinase [Saccharomyces cerevisiae]
 gi|1015725|emb|CAA89585.1| CDC8 [Saccharomyces cerevisiae]
 gi|1019679|gb|AAB39283.1| ORF YJR057w [Saccharomyces cerevisiae]
 gi|151945125|gb|EDN63376.1| thymidylate kinase [Saccharomyces cerevisiae YJM789]
 gi|285812946|tpg|DAA08844.1| TPA: Cdc8p [Saccharomyces cerevisiae S288c]
          Length = 216

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 2   MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + V+  I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 59  QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V  + PD T+ L           Q+  +  E +       + V   EK +Q F+ +
Sbjct: 117 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 167

Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217
                R   +   IVD +    Q V      ++W++V+  +S
Sbjct: 168 LDKEIRKGDESITIVDVTNKGIQEVEA----LIWQIVEPVLS 205


>gi|255071733|ref|XP_002499541.1| predicted protein [Micromonas sp. RCC299]
 gi|226514803|gb|ACO60799.1| predicted protein [Micromonas sp. RCC299]
          Length = 216

 Score = 45.1 bits (105), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG++  GKTT  + L   L+    +  + R P  T       +  L   +D   
Sbjct: 10  GAFILFEGVDRCGKTTQSTKLVESLKAAGVNAELWRYPDRTTEMGKMINAYLQSSLD-MD 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     +  AL +G  L+ DR+  S  A+   ++    L L+  +  
Sbjct: 69  DGAIHLLFSANRWEK-RAAMEKALGDGVTLVVDRYSYSGVAFTAAKEVP-GLDLEWCKAP 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
               + PD  + LD+PVD    R
Sbjct: 127 ERGLLRPDAVLYLDMPVDAAKTR 149


>gi|331220445|ref|XP_003322898.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301888|gb|EFP78479.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 228

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG++ +GK+T    L+  L++    V   R P  T A     +  L C   E  
Sbjct: 8   GSFIVFEGLDRSGKSTQCRRLEEKLKQAGRTVESIRFPDRTTAIGQMINSYL-CQTSELD 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
             A  ++FAA R +   + I   L  G  ++CDR+  S  A+   + S
Sbjct: 67  DHAIHLLFAANRWEKSAD-IHTTLRSGTTIICDRYAFSGTAFTAAKFS 113


>gi|156380955|ref|XP_001632032.1| predicted protein [Nematostella vectensis]
 gi|156219082|gb|EDO39969.1| predicted protein [Nematostella vectensis]
          Length = 214

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 24/213 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GK+T   LL  +L+    ++   R P  + A     +  L  G  E  
Sbjct: 7   GALICFEGCDRSGKSTQSRLLVDYLRSLGTNIEHMRFPDRSTAIGQCINSYLQ-GTSELD 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R + V   IR  L  G  ++ DR+  S  A+   +   +   L+  +  
Sbjct: 66  DHAIHLLFSANRWESVSK-IRSLLNTGTTIVVDRYAFSGVAFTSAK---KGFDLEWCKAP 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                 PD  I LD+ VD   +R +    RY   +      F+R    +  + +++    
Sbjct: 122 DRGLPAPDIVIFLDISVDNAAERSEYGGERYETSD------FQRS---VANRYKEL---- 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              Q D   ++D+  S + +   I  I  E ++
Sbjct: 169 ---QADSWKVLDAGKSIEELHKEIQKIACETIK 198


>gi|303277967|ref|XP_003058277.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460934|gb|EEH58228.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 214

 Score = 45.1 bits (105), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 3/143 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG++  GKTT  + L   L+    +  + R P  T +     +  L     E  
Sbjct: 8   GAFILFEGVDRCGKTTQSTKLVEALKSSGVNAELWRYPDRTTSMGQMINSYLQSKT-EMD 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++FAA R +     +   L EG  L+ DR+  S  A+   +     L L+  +  
Sbjct: 67  DGAIHLLFAANRWEK-RAAMEAKLAEGVTLVVDRYSYSGVAFTAAK-GIPGLDLEWCKSP 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            V  + PD  + L++PV+    R
Sbjct: 125 EVGLLRPDAVLYLNMPVEAAAAR 147


>gi|203288221|ref|YP_002223236.1| thymidylate kinase [Borrelia recurrentis A1]
 gi|201085441|gb|ACH95015.1| thymidylate kinase [Borrelia recurrentis A1]
          Length = 202

 Score = 44.7 bits (104), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L++    K    H T+EP      +  R  L +   +     
Sbjct: 8   FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFK-NPLRKV 65

Query: 66  AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108
           + A ++ A R +H+ N+   I   L + +  ++ DR+L SS AYQGE
Sbjct: 66  SLAHLYVADRYEHLYNIQNGIITILNKNQTKVISDRYLFSSIAYQGE 112


>gi|172986|gb|AAA35158.1| thymidylate kinase [Saccharomyces cerevisiae]
 gi|190409534|gb|EDV12799.1| thymidylate kinase [Saccharomyces cerevisiae RM11-1a]
 gi|207343848|gb|EDZ71181.1| YJR057Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273082|gb|EEU08037.1| Cdc8p [Saccharomyces cerevisiae JAY291]
          Length = 216

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 2   MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + V+  I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 59  QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V  + PD T+ L           Q+  +  E +       + V   EK +Q F+ +
Sbjct: 117 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 167

Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217
                R   +   IVD +    Q V      ++W++V+  +S
Sbjct: 168 LDKEIRKGDESITIVDVTNKDIQEVEA----LIWQIVEPVLS 205


>gi|70607739|ref|YP_256609.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639]
 gi|68568387|gb|AAY81316.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639]
          Length = 210

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+ EGI  +GKTTH+  L+ +L+ + Y V       G  +++     + S   D
Sbjct: 1   MEKGRIIAIEGIMSSGKTTHVQSLRDYLEDRGYVVTTI----GIQSSKLMADAIASVKRD 56

Query: 61  -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
             F      + +     D  EN+++P+L  G I++ D ++ +  A+   R
Sbjct: 57  IVFQRRTLFLAYVTDLADQTENLVKPSLDSGFIVIADGYVLTLEAWALTR 106


>gi|210623262|ref|ZP_03293679.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275]
 gi|210153663|gb|EEA84669.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275]
          Length = 227

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 17/163 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           MN  L I   G + +GK T    L + L    Y+V     P     +     + L     
Sbjct: 4   MNGKLIIIESGSDASGKATQSEELLKKLTADGYNVRKVEYPNYKSESSTLVKMYLRGDFG 63

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG------ERD 110
              D+  A   +  F A R    +         G I++ DR+  S+  +Q       ERD
Sbjct: 64  KHADDVDAYIASTFFTADRYASFKTEWEEFYRSGGIVIADRYTTSNMVHQASKMEIEERD 123

Query: 111 SSQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNR 150
                +LD L++          PD  I L++PVD  +K ++NR
Sbjct: 124 K----YLDWLEDYEYNLFKIPRPDEVIFLNVPVDYSIKLMENR 162


>gi|224533463|ref|ZP_03674056.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a]
 gi|224513425|gb|EEF83783.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a]
          Length = 202

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + TREP      E  R  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTREPSSGIIGEMIRKQLMNFE-NPLEES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148
           ++    +P+    ++   +I  +R+Q
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141


>gi|269962034|ref|ZP_06176388.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833118|gb|EEZ87223.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 80

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVL 54
          FI  EG+EGAGK+T I  +   L+     D+  TREPGGTP AE  R ++
Sbjct: 5  FIVVEGLEGAGKSTAIKTVLDTLKAAGIQDIVNTREPGGTPLAEKMRALV 54


>gi|259147521|emb|CAY80772.1| Cdc8p [Saccharomyces cerevisiae EC1118]
 gi|323308467|gb|EGA61712.1| Cdc8p [Saccharomyces cerevisiae FostersO]
 gi|323336951|gb|EGA78208.1| Cdc8p [Saccharomyces cerevisiae Vin13]
          Length = 215

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + V+  I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V  + PD T+ L           Q+  +  E +       + V   EK +Q F+ +
Sbjct: 116 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 166

Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217
                R   +   IVD +    Q V      ++W++V+  +S
Sbjct: 167 LDKEIRKGDESITIVDVTNKDIQEVEA----LIWQIVEPVLS 204


>gi|203284688|ref|YP_002222428.1| thymidylate kinase [Borrelia duttonii Ly]
 gi|201084131|gb|ACH93722.1| thymidylate kinase [Borrelia duttonii Ly]
          Length = 202

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 6/107 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L++    K    H T+EP      +  R  L +   +     
Sbjct: 8   FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFK-NPLRKV 65

Query: 66  AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108
           + A ++ A R +H+ N+   I   L + +  ++ DR+L SS AYQGE
Sbjct: 66  SLAHLYVADRYEHLYNIQNGIIAILNKNQTKVISDRYLFSSIAYQGE 112


>gi|216263713|ref|ZP_03435708.1| thymidylate kinase [Borrelia afzelii ACA-1]
 gi|215980557|gb|EEC21378.1| thymidylate kinase [Borrelia afzelii ACA-1]
          Length = 202

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I+ LK   + ++   + T+EP      E  +  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSIINKLKTICKNES-RYYFTKEPSSGIIGEMIKEQLMNFK-NPLKES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGE 108
             A ++AA R DH+     ++     +   ++ DR+L SS AYQG+
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGK 111


>gi|303389072|ref|XP_003072769.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301911|gb|ADM11409.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
          Length = 191

 Score = 44.7 bits (104), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 12/143 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI FEG++ +GKTT +  L   L     DV   R P  +          L     
Sbjct: 1   MTQGKFIVFEGLDRSGKTTIVDSLYDSLSSMG-DVRKMRFPNRSGNIGKVIDAYLR---K 56

Query: 61  EFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           E   E E I  +F+  R +    +    L +  ILLCDR+  S  +Y      ++ L LD
Sbjct: 57  EINLENETIHLLFSGDRYEQKSTI--EELRKSSILLCDRYSLSGASYS----VAKGLDLD 110

Query: 119 SLQEISVQEVMPDCTIILDLPVD 141
               +      PD TI +D+P+D
Sbjct: 111 WCVMVDSGLPKPDMTIFIDIPLD 133


>gi|237786074|ref|YP_002906779.1| thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758986|gb|ACR18236.1| Thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 219

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 31/225 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL------- 55
           + ++ EGI+GAGK T ++ +++ L  +   V +   P    +  A+ AR  L        
Sbjct: 1   MIVACEGIDGAGKNTLVTAIEKELVEREKPVALVSFPRYNDSVHAQLARSALYGGMGDVV 60

Query: 56  --SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-------Q 106
             +CG+        A +FA  R +  +++   +  +G  +L DRF+ S+ AY        
Sbjct: 61  DSACGM--------ATLFALDRAEIADDIAELS-EDGYFVLIDRFVASNAAYTAARSGWD 111

Query: 107 GERDSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           G+  S  +  +  + E+  + +   +PD  + L  P  +  +R   R     S   D FE
Sbjct: 112 GQSPSQDNPTVSWIAELEFERLGIPVPDLHVFLSTPPRLASERAVAREGEDASRARDAFE 171

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            KD  + ++    +  +AR+Q     +V         AT ++  +
Sbjct: 172 -KDSDLQQRTAAAYEALARDQWQSPWVVVEPGEVTRQATEVVEAI 215


>gi|261367061|ref|ZP_05979944.1| dTMP kinase [Subdoligranulum variabile DSM 15176]
 gi|282571180|gb|EFB76715.1| dTMP kinase [Subdoligranulum variabile DSM 15176]
          Length = 223

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 21/190 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---- 59
           G  I FEG++G+GK T  +L  + L+    D+     P     + A   + LS       
Sbjct: 2   GKLIIFEGLDGSGKGTQTALTAQKLKAHGVDLRQITFPNYESDSSALVKMYLSGQFGDKP 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FL 117
           D+  A A +  +A  R    +         G ++L DR+  S+  +Q  +    H   FL
Sbjct: 62  DDVNAYAASSFYAVDRFASYKTDWGDFYRAGGLILSDRYTTSNAVHQCAKLPPMHWDGFL 121

Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + L +   +++    PD  + L +  ++  K +  RY   ES       +KD  I EK R
Sbjct: 122 NWLFDFEYKKIGIPAPDAVVYLAVDPEVSQKLMDQRYHGDES-------KKD--IQEKDR 172

Query: 175 QIFLDIARNQ 184
           +    IAR++
Sbjct: 173 EY---IARSR 179


>gi|260796149|ref|XP_002593067.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
 gi|229278291|gb|EEN49078.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
          Length = 215

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDE 61
           G  I  EG++ +GKTT    L   L++      + R P  T A  +  +  L   C + +
Sbjct: 6   GALIVLEGVDHSGKTTQCMKLVEALKKHGQKAELIRFPDRTTAIGSVINDYLGNKCELHD 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F   A  ++F+A R + V  + +  L EG  L+ DR+  S  A+     +++ L +  LQ
Sbjct: 66  F---AIHLLFSANRWEAVPRMEK-LLSEGTSLIVDRYAYSGVAFT----AAKGLDMRRLQ 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +    PD  + L LP +   KR  + Y        + +E+ D      ++++  +  
Sbjct: 118 HSDIGLPRPDLVMYLTLPPEEAAKR--SEYG------GERYEQTDF-----QKKVAENFK 164

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             Q D   I+++  + + + T+IL +  E + K
Sbjct: 165 VLQEDDWKILNANQTIEELHTHILQLAKEAITK 197


>gi|195487624|ref|XP_002091984.1| GE13938 [Drosophila yakuba]
 gi|194178085|gb|EDW91696.1| GE13938 [Drosophila yakuba]
          Length = 211

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 16/209 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKTTQSRLLVELLKSKGIPALPMNFPERSSSIGQVINSYLTNSKD-LK 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY     S++ L  D     
Sbjct: 66  DEVIHLMFSANRWEHM-NQMKQKLLEGHTLVVDRYSFSGVAYS----SAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P +     + NR    E    + +E+  V    +  ++F  +  N
Sbjct: 121 ERGLIKPDAVFYLRAPPN----DLTNRGQYGE----ERYEK--VEFQSRVAKVFDRLCAN 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    H  D++     +   I +I  EL+
Sbjct: 171 EASYWHQFDASQPVDELHARIASITEELL 199


>gi|164658566|ref|XP_001730408.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
 gi|159104304|gb|EDP43194.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
          Length = 520

 Score = 44.7 bits (104), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI  EG++ +GK+T +    R +Q       + + P  T    +  H  L    D   
Sbjct: 311 GVFIVVEGLDRSGKSTQV---DRLVQTLGPRARLVKFPERTTPIGSMIHSYLKNQTDACD 367

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R + + ++++ +L +G+ ++CDR++ S  AY      ++ L L      
Sbjct: 368 QTVH-LLFSANRWELLSSIVQ-SLRDGQHVICDRYIFSGMAYT----HAKGLDLAWCTAP 421

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLR 154
            V   +PD T+ LDL      KR    + RY  R
Sbjct: 422 DVGLPVPDLTLFLDLDESTATKRAAYGEERYERR 455


>gi|124516694|gb|EAY58202.1| Thymidylate kinase [Leptospirillum rubarum]
          Length = 217

 Score = 44.7 bits (104), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-----HVTREPGGTPAAEAARHVLLSCG 58
           G  I  EGI+G+GK+T I LL+ +L+ K + V     + ++E          + +L   G
Sbjct: 8   GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKAKKKQLLTPYG 67

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                    +++ AA       + I PAL  GKI+L DR++ ++ A    RD+++ +  D
Sbjct: 68  F--------SLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRD 115

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147
            L       + PD T    +   +   R+
Sbjct: 116 WLVNNFRFAIRPDLTFFFRMDPALAYDRI 144


>gi|206603546|gb|EDZ40026.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG']
          Length = 217

 Score = 44.7 bits (104), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-----HVTREPGGTPAAEAARHVLLSCG 58
           G  I  EGI+G+GK+T I LL+ +L+ K + V     + ++E          + +L   G
Sbjct: 8   GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKAKKKQLLTPYG 67

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                    +++ AA       + I PAL  GKI+L DR++ ++ A    RD+++ +  D
Sbjct: 68  F--------SLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRD 115

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147
            L       + PD T    +   +   R+
Sbjct: 116 WLVNNFRFAIRPDLTFFFRMDPALAYDRI 144


>gi|320169555|gb|EFW46454.1| deoxythymidylate kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 210

 Score = 44.3 bits (103), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I FEG + +GK+T   +L   L+     V   R P   TP  +     L      E 
Sbjct: 9   GALIVFEGCDRSGKSTQCLMLVERLKALGKRVQHLRFPDRSTPTGQKINAYL--ANASEM 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +    +F+  R + V +++  AL  G  L+ DR+  S  A+     S++ L L+  ++
Sbjct: 67  QDDKIHQLFSENRWEAVPSMLE-ALKNGTTLVVDRYAFSGVAFS----SAKGLDLEWCKK 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146
                  PD  I LD+P++  +KR
Sbjct: 122 PDAGLPAPDAVIYLDIPIEAAMKR 145


>gi|168050195|ref|XP_001777545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671030|gb|EDQ57588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 226

 Score = 44.3 bits (103), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 6/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ +GK++  + L  +L+ +   V   R P  T A        LSC  D   
Sbjct: 16  GALIVLEGLDRSGKSSQCAQLASYLESQGVAVEAWRFPDRTTAMGRMISSYLSCQTD-LD 74

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A A  ++F+A R +   +++   L  G  L+ DR+  S  A+      ++ L LD  +  
Sbjct: 75  AAAIHLLFSANRWEKC-SLMESKLKAGTTLVIDRYSYSGVAF----SVAKGLDLDWCKGP 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
                 PD    LD+  ++   R
Sbjct: 130 EAGLPAPDLVFYLDISAEVAAAR 152


>gi|302896090|ref|XP_003046925.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256727853|gb|EEU41212.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 257

 Score = 44.3 bits (103), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 40/234 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
           G FI  EG++ +GKTT + LL +RF++  N  V V R P   TP  +     L S    E
Sbjct: 35  GAFIVLEGLDRSGKTTQVKLLEQRFVEEGN-KVKVMRFPDRSTPIGQMIDSYLKSD--VE 91

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V+  I+  L  G  ++CDR+  S   Y   + +   L L   +
Sbjct: 92  MDDHVIHLLFSANRWEAVKQ-IQSLLAAGTTIVCDRYYHSGIVYSAAKQNP-SLTLPWAR 149

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  + LDL         + +   R     + +ER +  +  + R++F  ++
Sbjct: 150 APERGLPRPDLVLFLDL--------TEEQARSRGGWGGEVYERSE--MQRRVRELFWGLS 199

Query: 182 -------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                              + + +   +VD+  S + VA      VW  V+ RV
Sbjct: 200 MGGRDVTAQGLGLDEGEGWKQEEEDLVVVDAGGSVEEVAEE----VWRKVKGRV 249


>gi|153956386|ref|YP_001397151.1| hypothetical protein CKL_3795 [Clostridium kluyveri DSM 555]
 gi|219856699|ref|YP_002473821.1| hypothetical protein CKR_3356 [Clostridium kluyveri NBRC 12016]
 gi|146349244|gb|EDK35780.1| Tmk [Clostridium kluyveri DSM 555]
 gi|219570423|dbj|BAH08407.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 228

 Score = 44.3 bits (103), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 10/146 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T    L   L  + Y+V     P     + A   + L+    E  
Sbjct: 6   GKLIVIEGCDGSGKATQTRKLYNRLLDEKYNVKKVEYPNYNSESSALVKMYLNGDFGENP 65

Query: 64  AEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116
            +  A V    +   R    +   +     G I+L DR+  S+  +Q  +  +   +  F
Sbjct: 66  EDVSAYVASTFYGVDRFASYKTQWKKFYEGGGIVLSDRYTTSNMVHQASKIDNIEEKDKF 125

Query: 117 LDSLQEISVQEV---MPDCTIILDLP 139
           L  L +         +PDC I LD+P
Sbjct: 126 LKWLWDFEFNIFKLPVPDCVIFLDMP 151


>gi|67902452|ref|XP_681482.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
 gi|40739679|gb|EAA58869.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
          Length = 227

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 89/227 (39%), Gaps = 16/227 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVD 60
           G  I  EG++ AGK++    L   LQ     V   R PG +  A   R  L+     G  
Sbjct: 11  GALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPGDSSFARTLRRKLIDGYLRGQS 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +  ++F+A R + V   I   +  G  ++ DR+  S   Y   + ++  L L+  
Sbjct: 71  HLDDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEWA 128

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V    PD  + L +  +   KR        E+      E     + E    IF D+
Sbjct: 129 WQPEVGLPKPDLCLFLSISPEEAAKRGGFGGERYEN------EAMQTRVRELFNTIF-DL 181

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSSKKDI 225
            R    R  I+D+  S   V+ +ILN+V E +      SPL     I
Sbjct: 182 QRATDIR--IIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 226


>gi|118468484|ref|YP_886239.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155]
 gi|118169771|gb|ABK70667.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155]
          Length = 210

 Score = 44.3 bits (103), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 13/172 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDE 61
           + I+ EG++GAGK T  + L+   +  +  V     P      PA  AA  +  S G   
Sbjct: 1   MLIAIEGVDGAGKRTLTNGLRAAFETNHKSVASLAFPRYHQSVPADLAAEALRGSHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114
               A A +FA  R    E +  ++ A     +++ DR++ S+ AY   R     D    
Sbjct: 61  ESVYAMATLFALDRAGAREQIEHLQAAY---DVVILDRYVASNAAYSAARLHQGVDGEVV 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            ++  L+   +   +PD  ++L++P ++  +R ++R +       D +ER D
Sbjct: 118 TWVHELEFGRLHLPVPDWQVLLNVPTELAAQRAEHRANTEADRAKDAYERDD 169


>gi|111115628|ref|YP_710246.1| thymidylate kinase [Borrelia afzelii PKo]
 gi|110890902|gb|ABH02070.1| thymidylate kinase [Borrelia afzelii PKo]
          Length = 202

 Score = 44.3 bits (103), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I+ LK   + ++   + T+EP      E  +  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSIINKLKTICKNES-RYYFTKEPSSGIIGEMIKEQLMNFK-NPLKES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGE 108
             A ++AA R DH+     ++     +   ++ DR+L SS AYQG+
Sbjct: 66  IFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGK 111


>gi|323446155|gb|EGB02432.1| hypothetical protein AURANDRAFT_35261 [Aureococcus anophagefferens]
 gi|323448063|gb|EGB03967.1| hypothetical protein AURANDRAFT_33306 [Aureococcus anophagefferens]
          Length = 214

 Score = 44.3 bits (103), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+F+ FEG++ +GK+T   LL   L+ K     + R P         R   +   +D   
Sbjct: 10  GVFVVFEGVDRSGKSTQCKLLVEGLRAKGRSAELRRFP--------ERSTGIGQLIDKYL 61

Query: 61  ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E    A  ++F+A R D    + R AL  G  ++CDR+  S  A+   + +     
Sbjct: 62  KRELELDDRAVHLLFSANRWDEAAKIER-ALASGVDVVCDRYAFSGVAFSAAKPNIDD-- 118

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
           LD  +        PD  + L++P
Sbjct: 119 LDWCKAPDAGLPKPDVVVFLEIP 141


>gi|296168958|ref|ZP_06850627.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896427|gb|EFG76080.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 229

 Score = 43.9 bits (102), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEA--ARHVLLS 56
           + I+ EG++GAGK T    L++  +     V +   P          AAEA   RH  L+
Sbjct: 1   MLIAIEGVDGAGKRTLSEGLRKAFEAAGKSVAIVGFPRYGKSVTADVAAEALHGRHGDLA 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DS 111
             V      A A++FA  R   VE+ I     +  +++ DR++ S+ AY   R       
Sbjct: 61  ASV-----YAMAMLFALDRAGAVED-IEALRRDHDVVILDRYVASNAAYSAARLHEGAGG 114

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
           +   ++   +   ++   PD  ++L +P D+  +R ++R         D +ER D
Sbjct: 115 AAAAWVLEFEYRRLRLPAPDWQVLLAVPADLAGQRARSRAESDPGRARDSYERDD 169


>gi|319411558|emb|CBQ73602.1| related to thymidylate kinase [Sporisorium reilianum]
          Length = 1229

 Score = 43.9 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 11/143 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++ AGK+T +  L + L  K       + P  T A     +  L+   D   
Sbjct: 431 GFFIVVEGLDRAGKSTQVERLAQHLHAK-----AIKFPERTTAIGQMINSYLAQTSD-LD 484

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +A  ++F+A R + V + I+  L  G+ ++CDR+  S  AY      ++ L  D  +  
Sbjct: 485 DQAIHLLFSANRWECVAS-IKKTLDAGESIVCDRYAFSGIAYS----VAKGLSYDWCRNP 539

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            V   +PD T+ LDL  +    R
Sbjct: 540 DVGLPLPDLTMFLDLDAETAAAR 562


>gi|121718363|ref|XP_001276187.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
 gi|119404385|gb|EAW14761.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
          Length = 221

 Score = 43.9 bits (102), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 24/228 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ AGK++    L+  LQ   Y V   R P   TP  +     L   G    
Sbjct: 8   GALIVVEGLDRAGKSSQCERLRDSLQASGYSVKYIRFPDRTTPIGQLINGYLQ--GQSHL 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +  ++F+A R + +   I   +  G  ++ DR+  S   Y   +  +Q+L L+   +
Sbjct: 66  DDHSIHLLFSANRWE-IARTIENDIANGVTVIVDRYSYSGAVYSAAK-GNQNLSLEWAWQ 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD  + L +  +   K        R    ++ +E +   +  + R++F  + +
Sbjct: 124 PEIGLPQPDICLFLRISPEEAAK--------RGGFGIERYENEK--MQSRVRELFQTLFK 173

Query: 183 NQ-PDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLSS 221
            Q  D  H+VD+  +  +V+ +IL  V   ++        KR+ P+++
Sbjct: 174 LQLGDYIHMVDAGRTLDAVSQDILQTVTACLETIDATAPLKRLGPIAN 221


>gi|261335952|emb|CBH09285.1| putative thymidylate kinase [Heliconius melpomene]
          Length = 208

 Score = 43.9 bits (102), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 28/222 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           +  G FI  EG++  GKTT    L   L+ K         P   T   E     L S   
Sbjct: 3   LKRGAFIVIEGVDRTGKTTQAKKLVESLKNKQVSAEYMNFPDRKTDIGEVINSYLTSK-- 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++   EA  ++F+A R + V N I+  L+ G  ++ DR+  S  AY     +++ L L  
Sbjct: 61  NDLSNEAIHLLFSANRWEKV-NYIKEKLLNGITVIVDRYCFSGVAYS----AAKGLDLSW 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +        PD      LP    L+ VQ R         + F  +   + E ++++   
Sbjct: 116 CKSPDAGLPKPDKVFFFTLP----LEHVQQR---------NGFGSERYEVPEFQKKVTNT 162

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
             + + D   ++D++ S + +         ELV+K +S + S
Sbjct: 163 YMKLKEDNWDMLDASRSLEVIHK-------ELVEKVLSVVDS 197


>gi|311739824|ref|ZP_07713658.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304897|gb|EFQ80966.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 204

 Score = 43.9 bits (102), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 3/162 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T +S LK  L R    +   R      A  A + +    G     A
Sbjct: 1   MLISIEGIDGAGKNTLVSALKESLDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122
            A A +FA  R   V++ ++ A     ++L DR++ S+ AY   R  D +   ++ +L+ 
Sbjct: 61  YAMATLFALDRY-GVKDQLQRAKESDTVVLLDRYVASNAAYSAARLEDDAVMEWVHNLEF 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
            ++     D  + LD  V++  +R Q R     S   D +ER
Sbjct: 120 GTLSLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER 161


>gi|242792112|ref|XP_002481887.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
 gi|218718475|gb|EED17895.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
          Length = 238

 Score = 43.9 bits (102), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 24/223 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  +  EG++ AGK++   LL + L   NY     R P   TP  +     L   G  + 
Sbjct: 13  GALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYLR--GQSQL 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +  ++F+A R +  ++ I   +  G  ++ DR+  S   Y   +  + +L L    +
Sbjct: 71  DDHSIHLLFSANRWELAQS-IHEYIANGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWAWQ 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIF---L 178
             V    PD  + L +  +   KR    Y +         ER +    +KR R++F   L
Sbjct: 129 PEVGLPRPDLCLFLSISPEEAAKR--GGYGV---------ERYETDSMQKRVRELFLSLL 177

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219
           D+  N  D   ++D+  S   VA +IL+ V E ++    + PL
Sbjct: 178 DLPHN--DEICVIDAGQSVDEVAQDILDPVLECMKNVDSIGPL 218


>gi|213024834|ref|ZP_03339281.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 68

 Score = 43.9 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 38/67 (56%)

Query: 84  RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG 143
           +PAL +G  ++ DR   S+ AYQG         L +L++  + +  PD T+ LD+  ++G
Sbjct: 1   KPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDVTPEVG 60

Query: 144 LKRVQNR 150
           LKR + R
Sbjct: 61  LKRARAR 67


>gi|212535132|ref|XP_002147722.1| thymidylate kinase [Penicillium marneffei ATCC 18224]
 gi|210070121|gb|EEA24211.1| thymidylate kinase [Penicillium marneffei ATCC 18224]
          Length = 238

 Score = 43.9 bits (102), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 24/223 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  +  EG++ AGK++   LL + L   NY     R P   TP  +     L   G  + 
Sbjct: 13  GALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYLR--GESQL 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +  ++F+A R + V   I+  + +G  ++ DR+  S   Y   +  + +L L    +
Sbjct: 71  DDHSIHLLFSANRWE-VAQSIQKDIADGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWAWQ 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIF---L 178
             V    PD  + L +  +   KR    Y +         ER +    +KR R +F   L
Sbjct: 129 PEVGLPRPDLCLFLSISPEEAAKR--GGYGV---------ERYETDSMQKRVRDLFLSLL 177

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219
           D+  N  D   ++D+  S   VA +IL  V E ++    + PL
Sbjct: 178 DLPHN--DEICVIDAGQSVDEVALDILEPVLECMKNVDSIGPL 218


>gi|71018245|ref|XP_759353.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
 gi|46099078|gb|EAK84311.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
          Length = 1208

 Score = 43.9 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 11/135 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++ AGK+T +  L   LQ K       + P  T A     +  L+   D   
Sbjct: 426 GFFIVVEGLDRAGKSTQVERLAAHLQAK-----AVKFPERTTAIGQMINSYLAQTSD-LD 479

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +A  ++F+A R + V ++ R  L  G+ ++CDR+  S  AY      ++ L  D  +  
Sbjct: 480 DQAIHLLFSANRWECVASLHR-TLEAGESIVCDRYAFSGIAYS----VAKGLSYDWCRNP 534

Query: 124 SVQEVMPDCTIILDL 138
            V   +PD T+ LDL
Sbjct: 535 DVGLPLPDLTLFLDL 549


>gi|289422838|ref|ZP_06424671.1| dTMP kinase [Peptostreptococcus anaerobius 653-L]
 gi|289156748|gb|EFD05380.1| dTMP kinase [Peptostreptococcus anaerobius 653-L]
          Length = 226

 Score = 43.9 bits (102), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 16/163 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LF+   G +G+GK T    L   L    Y V     P     + A   + L+    
Sbjct: 1   MAGKLFVIESGTDGSGKATQTKKLFDRLVEDGYRVRKVEFPNYDSDSSALIKMYLNG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSS 112
           +FG +A+ +        +AA R    +       + G I+L DR+  S+  +Q  + DS+
Sbjct: 58  DFGDKADDVDAYIASTFYAADRYASYKLGWEDFYLNGGIILADRYTTSNMVHQASKMDST 117

Query: 113 --QHLFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNR 150
             +  FLD L   E  + ++  PD    LD+P+ +  K +++R
Sbjct: 118 DDKEKFLDWLDDFEYGLYKIPRPDGVFFLDVPLKVSAKLMEDR 160


>gi|294950385|ref|XP_002786603.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239900895|gb|EER18399.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 233

 Score = 43.9 bits (102), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 5/147 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI  EG++ +GK+T +  +   L QR   +V     P  + A        L    
Sbjct: 1   MARGAFIVLEGLDRSGKSTQLRRISEALRQRTGKEVVEMGFPRRSSAIGKMLDTYLRDSS 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   EA  ++F+A R + +  ++   L  G+ ++CDR++ S  AY   + +    +  S
Sbjct: 61  SKMRDEAVHLLFSANRWEAMSEML-SHLAAGRHIVCDRYIFSGVAYTAMKGTVDFEWCKS 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKR 146
              + V    PD  + LDL  +   KR
Sbjct: 120 ---VDVGLPKPDLVVFLDLSPEAAAKR 143


>gi|195941996|ref|ZP_03087378.1| thymidylate kinase (tmk) [Borrelia burgdorferi 80a]
          Length = 257

 Score = 43.9 bits (102), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++   +     
Sbjct: 63  FYCIEGIDGSGKTSITNKLKALCNDES-KYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 120

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + + ++ DR+L SS AYQG+             E
Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148
           ++    +P+    ++   +I  +R+Q
Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQ 196


>gi|187777353|ref|ZP_02993826.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC
           15579]
 gi|187774281|gb|EDU38083.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC
           15579]
          Length = 235

 Score = 43.9 bits (102), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 23/196 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG +G+GK T    L   L ++N  V     P     + A   + LS    
Sbjct: 5   MKRGRLIVIEGSDGSGKATQTKKLYDKLVKQNKKVKKVEFPNYKSESSALIKMYLSG--- 61

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111
           EFG   +++        +A  R    +       ++G I++ DR+  S+  +Q  +    
Sbjct: 62  EFGKNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKEV 121

Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
            ++  FL+ L +   ++    +PDC I LD+P            SL E+    +   K+ 
Sbjct: 122 QAKDKFLNWLWDFEFEKFNLPVPDCVIFLDMPPKCSK-------SLMETRNNKFTGEKEK 174

Query: 168 MIHEKRRQIFLDIARN 183
            IHE   +  L+   N
Sbjct: 175 DIHENNYEYLLESYNN 190


>gi|167753463|ref|ZP_02425590.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216]
 gi|167658088|gb|EDS02218.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216]
          Length = 225

 Score = 43.9 bits (102), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 11/153 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCG-VD 60
           + I  EG++GAGK+T + L++R   ++  + H    P           AR +    G VD
Sbjct: 1   MLIVLEGLDGAGKSTQVELVRRMFAQEGVESHFLHFPRFDAPVYGELIARFLRGELGAVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114
           +      A++FA  R D     +R  L  G  ++ DR++ S+  +Q      G+R     
Sbjct: 61  KVDPYLVALLFAGDRADAAAQ-LRCWLDAGHAVVLDRYVYSNVGFQCAKLPAGDRQEELR 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRV 147
            ++  L+        PD ++ LD+P     K++
Sbjct: 120 RWILDLEFGYYGIPRPDVSLFLDVPFAFTEKKL 152


>gi|315918331|ref|ZP_07914571.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692206|gb|EFS29041.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 226

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 35/234 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           N G  I  EG + +GK T   LL + FL        ++     +PA E  +  L      
Sbjct: 4   NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AG 59

Query: 61  EFGAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----G 107
           EFG  AE +       ++A  R   + ++       E  I + DR++ S+  +Q     G
Sbjct: 60  EFGLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEG 119

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           +      ++L++L+    +   PDC I LD+P     + ++ R     +  +   E KD 
Sbjct: 120 KEKEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD- 173

Query: 168 MIHEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211
            IHE+ R+      RN  +           C   D   S Q +   IL  V E+
Sbjct: 174 -IHERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 226


>gi|325680793|ref|ZP_08160331.1| dTMP kinase [Ruminococcus albus 8]
 gi|324107573|gb|EGC01851.1| dTMP kinase [Ruminococcus albus 8]
          Length = 217

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 24/179 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG++G+GK+T    L  +L+ K+  +     P     +     + L+    E    
Sbjct: 4   LIVLEGLDGSGKSTQFEKLTEYLKGKDVKLKAISFPDYNDPSSTLVQMYLN---GEIAGS 60

Query: 66  AEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116
           AEA+        +AA R    +        EG ++L  R++ S+  YQ  +  +     +
Sbjct: 61  AEAVNAYAASSFYAADRYVSYKKYWEKDHAEGSLILAARYVTSNCIYQMTKLPEEQWESY 120

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L+ L++   +++    P   I LD+P++I  K +  RY   ES       +KD  IHEK
Sbjct: 121 LEWLEDYEYEKLGLPKPTKVIFLDMPIEISQKLLSARYDGDES-------KKD--IHEK 170


>gi|323347864|gb|EGA82125.1| Cdc8p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 168

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 5/136 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + V+  I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIIL 136
            +  V  + PD T+ L
Sbjct: 116 LQPDVGLLKPDLTLFL 131


>gi|257057066|ref|YP_003134898.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
 gi|256586938|gb|ACU98071.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
          Length = 220

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 9/173 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  +  EG++GAGK T    L   L+     V     P  G    A+  R  L     D 
Sbjct: 2   GRLVVVEGLDGAGKRTLTESLTAALREHGATVTTMTFPRYGRDVHADLVREALHGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115
                  A+++A  R    ++ IR AL E  ++L DR++ S+ AYQ  R     D     
Sbjct: 62  AESVYGMAVLYALDRRGARDD-IRRALDEHDVVLLDRYVASNAAYQAARLRQGVDGPVVR 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           ++  L+       +PD  ++L +PV++  +R   R     S   D FE  D +
Sbjct: 121 WVRELEIDRFGLPVPDTQLLLRVPVEVAAERAVARERQDTSRTRDAFESDDAL 173


>gi|119498863|ref|XP_001266189.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
 gi|119414353|gb|EAW24292.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
          Length = 221

 Score = 43.9 bits (102), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 16/215 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G  I  EG++ AGK++    L+  LQ   + V   R P   TP  +     L   G  
Sbjct: 6   NRGALIVVEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + +   I   +  G  ++ DR+  S   Y   +  +++L L+  
Sbjct: 64  QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNRNLSLEWA 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD  + L +  +   K        R    ++ +E +   +  + R++F  +
Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAK--------RGGFGVERYENE--TMQNRVRELFQTL 171

Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               Q D  H +D+  SF +V+ +I+ IV + +++
Sbjct: 172 FDLQQGDYVHTIDAGRSFDAVSQDIMKIVTDSIER 206


>gi|195383450|ref|XP_002050439.1| GJ22153 [Drosophila virilis]
 gi|194145236|gb|EDW61632.1| GJ22153 [Drosophila virilis]
          Length = 211

 Score = 43.5 bits (101), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I FEG +  GKTT    L   L  K  D   T  P   T       H L +    E 
Sbjct: 7   GALIVFEGCDRCGKTTQNRQLFELLTGKGVDTMQTNFPDRSTAIGNVINHYLQNN--QEL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             E   ++F+A R + + N I+  L+ G  ++CDR+  S  AY
Sbjct: 65  SDEVIHLLFSANRWERM-NSIKKDLLAGTTVICDRYAYSGVAY 106


>gi|216264232|ref|ZP_03436224.1| thymidylate kinase [Borrelia burgdorferi 156a]
 gi|218249745|ref|YP_002375292.1| thymidylate kinase [Borrelia burgdorferi ZS7]
 gi|221217600|ref|ZP_03589069.1| thymidylate kinase [Borrelia burgdorferi 72a]
 gi|223889303|ref|ZP_03623890.1| thymidylate kinase [Borrelia burgdorferi 64b]
 gi|224532921|ref|ZP_03673532.1| dTMP kinase [Borrelia burgdorferi WI91-23]
 gi|225550262|ref|ZP_03771221.1| thymidylate kinase [Borrelia burgdorferi 118a]
 gi|226320838|ref|ZP_03796390.1| thymidylate kinase [Borrelia burgdorferi 29805]
 gi|226321258|ref|ZP_03796786.1| thymidylate kinase [Borrelia burgdorferi Bol26]
 gi|215980705|gb|EEC21512.1| thymidylate kinase [Borrelia burgdorferi 156a]
 gi|218164933|gb|ACK74994.1| thymidylate kinase [Borrelia burgdorferi ZS7]
 gi|221192546|gb|EEE18764.1| thymidylate kinase [Borrelia burgdorferi 72a]
 gi|223885224|gb|EEF56327.1| thymidylate kinase [Borrelia burgdorferi 64b]
 gi|224512159|gb|EEF82549.1| dTMP kinase [Borrelia burgdorferi WI91-23]
 gi|225369130|gb|EEG98584.1| thymidylate kinase [Borrelia burgdorferi 118a]
 gi|226233290|gb|EEH32041.1| thymidylate kinase [Borrelia burgdorferi Bol26]
 gi|226233704|gb|EEH32433.1| thymidylate kinase [Borrelia burgdorferi 29805]
 gi|312147845|gb|ADQ30504.1| thymidylate kinase [Borrelia burgdorferi JD1]
          Length = 202

 Score = 43.5 bits (101), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148
           ++    +P+    ++   +I  +R+Q
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141


>gi|225549383|ref|ZP_03770355.1| thymidylate kinase [Borrelia burgdorferi 94a]
 gi|225370011|gb|EEG99452.1| thymidylate kinase [Borrelia burgdorferi 94a]
 gi|312149482|gb|ADQ29553.1| thymidylate kinase [Borrelia burgdorferi N40]
          Length = 202

 Score = 43.5 bits (101), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSITNKLKDLCNDES-RYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148
           ++    +P+    ++   +I  +R+Q
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141


>gi|225683576|gb|EEH21860.1| thymidylate kinase [Paracoccidioides brasiliensis Pb03]
          Length = 224

 Score = 43.5 bits (101), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 26/222 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T  +LL+  LQR  ++ +  R+    P      + +    +    
Sbjct: 13  GALIVVEGLDRAGKSTQCALLQEALQRGGHENYGDRKTDQCPIWLETHNWMTIQSI---- 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 +F+A R +  +  I+  +  G  ++ DR+  S   Y   +D    L LD   + 
Sbjct: 69  -----FLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKDVP-GLSLDWAWQP 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181
            +    PD  + L++  +   +R    Y L         ER +  I + R RQ+F   I 
Sbjct: 122 EIGLPQPDIWLFLNISPEEAARR--GGYGL---------ERYENDILQARVRQLFQTFIE 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221
           R  P    ++++  S   VA +IL+   + ++K   + PL S
Sbjct: 171 REDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 212


>gi|169334897|ref|ZP_02862090.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257635|gb|EDS71601.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM
           17244]
          Length = 227

 Score = 43.5 bits (101), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 16/163 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G     EG++G+GK T   L+ + L+ + ++V     P     + A   + L+    
Sbjct: 1   MNKGKLFVIEGLDGSGKQTQSELITKRLKEEGHNVIRASYPNYKSQSSALVKMYLNG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERD 110
           +FG  A+ I        +A  R    +       + G I++ DR++ S+  +QG   +  
Sbjct: 58  DFGKNADDIDPKVASTFYAVDRYATYKKEYEDFYLNGGIIIADRYVTSNMVHQGCKIKDV 117

Query: 111 SSQHLFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNR 150
             +  +LD L   E ++ ++  PD    LD+  ++    +++R
Sbjct: 118 EKKEEYLDWLLDFEYNIFKIPKPDKVFFLDIDPEVSKALIKDR 160


>gi|321254063|ref|XP_003192951.1| thymidylate kinase [Cryptococcus gattii WM276]
 gi|317459420|gb|ADV21164.1| thymidylate kinase, putative [Cryptococcus gattii WM276]
          Length = 217

 Score = 43.5 bits (101), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 6/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG++  GK+T +  L + L+R+     + + P  T          L     E  
Sbjct: 7   GAFIVFEGLDRCGKSTQVDHLVQRLERQGRRARLQKFPDRTTQIGKMIDAYLQSKT-EID 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     IR  L  G  ++ DR+  S  A+     +++ L  D   + 
Sbjct: 66  DHAIHLLFSANRWE-CSAAIRRDLASGITVIADRYAFSGIAFS----AAKGLCFDFCLQP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
                +PD T+ L LP +   +R
Sbjct: 121 DAGLPLPDATLYLTLPPETAARR 143


>gi|317059743|ref|ZP_07924228.1| thymidylate kinase [Fusobacterium sp. 3_1_5R]
 gi|313685419|gb|EFS22254.1| thymidylate kinase [Fusobacterium sp. 3_1_5R]
          Length = 226

 Score = 43.5 bits (101), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 35/234 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           N G  I  EG + +GK T   LL + FL        ++     +PA E  +  L      
Sbjct: 4   NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AG 59

Query: 61  EFGAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----G 107
           EFG  AE +       ++A  R   + ++       E  I + DR++ S+  +Q     G
Sbjct: 60  EFGLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEG 119

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           +      ++L++L+    +   PDC I LD+P     + ++ R     +  +   E KD 
Sbjct: 120 KEKEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD- 173

Query: 168 MIHEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211
            IHE+ R+      RN  +           C   D   S Q +   IL  V E+
Sbjct: 174 -IHERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 226


>gi|15595138|ref|NP_212927.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31]
 gi|2688733|gb|AAC67140.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31]
          Length = 257

 Score = 43.5 bits (101), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++   +     
Sbjct: 63  FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 120

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + + ++ DR+L SS AYQG+             E
Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148
           ++    +P+    ++   +I  +R+Q
Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQ 196


>gi|25027324|ref|NP_737378.1| thymidylate kinase [Corynebacterium efficiens YS-314]
 gi|259506538|ref|ZP_05749440.1| thymidylate kinase [Corynebacterium efficiens YS-314]
 gi|23492605|dbj|BAC17578.1| putative thymidylate kinase [Corynebacterium efficiens YS-314]
 gi|259165958|gb|EEW50512.1| thymidylate kinase [Corynebacterium efficiens YS-314]
          Length = 203

 Score = 43.5 bits (101), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 19/166 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           + IS EGI+GAGK T +  L      R +    YD  +  +     AAEA  H  +    
Sbjct: 1   MIISIEGIDGAGKNTLVRALTERIDARVISFPRYDTSIHAQ----LAAEAL-HGRMGDLT 55

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFL 117
           D   A A A +FA  R D ++ +  P L     LL DR++ S+ AY     RD +   ++
Sbjct: 56  DS--AHAMATLFALDRHDALDELTAPGL-----LLLDRYVASNAAYTAARLRDDAAATWV 108

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
             L+   +    P   ++LD P D+  +R + R +   +   D +E
Sbjct: 109 AELEFGRLGLPRPALQVLLDTPTDLAQERARRREASDGARTRDRYE 154


>gi|224531531|ref|ZP_03672163.1| thymidylate kinase [Borrelia valaisiana VS116]
 gi|224510996|gb|EEF81402.1| thymidylate kinase [Borrelia valaisiana VS116]
          Length = 202

 Score = 43.5 bits (101), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 26/172 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  +  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSITNKLKTLCNDES-KYYFTKEPSSGIIGEMIKEQLMNFK-NPLQES 65

Query: 66  AEAIVFAAARLDHV--ENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+  +  I   L    I ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRNDHLYKKGGILETLNTKSIKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQN-----------RYSLRESACLDYFE 163
           ++    +P+    +++  ++  +R+Q            RY   E   L Y +
Sbjct: 116 LNKNFPLPEKVFFIEIEPNLAYERIQKHRTQSDLFELERYKTFEQIALKYLK 167


>gi|307243785|ref|ZP_07525917.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678]
 gi|306492839|gb|EFM64860.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678]
          Length = 233

 Score = 43.1 bits (100), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 16/163 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G +G+GK T   LL   L+   Y V     P     + A   + L     
Sbjct: 1   MQGSVFVIESGTDGSGKATQTKLLYDRLKADGYKVIKVSYPNYDSDSSALVKMYLRG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS- 112
           +FG +A+ +        +AA R    +        EG I++ DR+  S+  +Q  +    
Sbjct: 58  DFGKKADDVDAYIASTFYAADRYASYKTEWEDFYQEGGIVIADRYTTSNMVHQASKMDDI 117

Query: 113 --QHLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNR 150
             +  FLD L +      +   P     LD+PVD+    +++R
Sbjct: 118 EERASFLDWLDQYEYGLYKLPRPREVYFLDVPVDVSQDLIRDR 160


>gi|225551698|ref|ZP_03772642.1| thymidylate kinase [Borrelia sp. SV1]
 gi|225371725|gb|EEH01151.1| thymidylate kinase [Borrelia sp. SV1]
          Length = 202

 Score = 43.1 bits (100), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTKEPSSGIIGELIREQLMNFE-NPLEES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148
           ++    +P+    ++   +I  +R+Q
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141


>gi|324512226|gb|ADY45070.1| Thymidylate kinase [Ascaris suum]
          Length = 234

 Score = 43.1 bits (100), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 79/208 (37%), Gaps = 20/208 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + AGK+T    +   +Q +     +   P  +          L   V+   
Sbjct: 5   GALIVFEGCDRAGKSTQAQRMVGRIQARGERAELISFPDRSTDLGKFIDQYLKGNVEMEP 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EA  +VFAA R   V   +R  L  G  L+ DR+  S  AY   +     L    + ++
Sbjct: 65  REAH-LVFAANRQALV-GTMRNKLQHGTHLIVDRYTYSGIAYTLAKGLDVSLEWAKIHDV 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  + PDC +  DL  D   KR      R    E  C  Y             +    +
Sbjct: 123 GI--LKPDCVLYFDLLPDEARKRSGFGDERLEAYEYQCTVY-------------KFMQTL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
                D   ++D++ S   V+T++ N++
Sbjct: 168 GSENADIWKVIDASKSIDEVSTDVWNLL 195


>gi|290462111|gb|ADD24103.1| Thymidylate kinase [Lepeophtheirus salmonis]
          Length = 214

 Score = 43.1 bits (100), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 9/146 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI  EG + +GKTT   L KR  Q  N++    R P        +       G  
Sbjct: 6   LKRGAFIVLEGCDRSGKTT---LAKRLSQDPNFEF--LRFPDRDSKLTGSLINSFLTGAK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   +   ++F+A R + V  ++   L  GK ++CDR+  S  AY     S   +  D  
Sbjct: 61  EMCGQLIHLLFSANRWEKVPQILS-TLDSGKHIICDRYAYSGIAYS---SSKPGMSFDWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146
                    PD  + LD+  +  LKR
Sbjct: 117 ANSDNGLPTPDLILFLDVSPEEALKR 142


>gi|291544985|emb|CBL18094.1| thymidylate kinase [Ruminococcus sp. 18P13]
          Length = 234

 Score = 43.1 bits (100), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 16/220 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G  I  +G++G GK+T   LL + +++    V     P     + A   + L+  +    
Sbjct: 5   GKLIVLDGLDGCGKSTQFQLLSQRMEQAGIPVLPISFPDYDHPSSALVKLYLNGEISPHA 64

Query: 61  -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +  A A +  +A  R    +        +G  +L  R++ S+  +Q  +   Q  + D 
Sbjct: 65  GDVNAYAASSFYAVDRYASYKRCWEQPYQQGTTILASRYVTSNAIHQMSKLPRQE-WDDY 123

Query: 120 LQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L+ +S  E        PD  + LD+PV    K + +RY   E+         DV   E+ 
Sbjct: 124 LEWLSAYEYDKLELPRPDLVLFLDMPVSAAQKLLCDRYGGDETK--KDIHESDVAYMERC 181

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVAT-NILNIVWELV 212
           R   L  A+ Q     ++  +   Q +    I + VW++V
Sbjct: 182 RDAALYAAQQQ--GWQVIPCSRDAQPLTVEEIGDRVWKVV 219


>gi|323332865|gb|EGA74268.1| Cdc8p [Saccharomyces cerevisiae AWRI796]
 gi|323354251|gb|EGA86094.1| Cdc8p [Saccharomyces cerevisiae VL3]
          Length = 138

 Score = 42.7 bits (99), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + V+  I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIIL 136
            +  V  + PD T+  
Sbjct: 116 LQPDVGLLKPDLTLFF 131


>gi|302807401|ref|XP_002985395.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
 gi|300146858|gb|EFJ13525.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
          Length = 229

 Score = 42.7 bits (99), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 21/198 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ +GK++    L  FL+     V   R P  T A  ++    L  G  E  
Sbjct: 7   GALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGA-ELD 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +    + R  LM G  L+ DR+  S  A+   +       LD L+  
Sbjct: 66  DRAVHLLFSANRWEKRLQMERK-LMAGTTLVVDRYSYSGVAFSAAKG------LD-LEWC 117

Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              EV +P   ++L L +      V+  Y       LD+           ++++ L    
Sbjct: 118 KAPEVGLPAADLVLYLDISPEEAAVRGGYGDERYEQLDF-----------QKKVALQYKG 166

Query: 183 NQPDRCHIVDSAHSFQSV 200
            Q  R  IVD+  SF  V
Sbjct: 167 LQGKRWKIVDARQSFDQV 184


>gi|125974597|ref|YP_001038507.1| thymidylate kinase [Clostridium thermocellum ATCC 27405]
 gi|256004041|ref|ZP_05429026.1| thymidylate kinase [Clostridium thermocellum DSM 2360]
 gi|281419122|ref|ZP_06250139.1| thymidylate kinase [Clostridium thermocellum JW20]
 gi|125714822|gb|ABN53314.1| thymidylate kinase [Clostridium thermocellum ATCC 27405]
 gi|255991964|gb|EEU02061.1| thymidylate kinase [Clostridium thermocellum DSM 2360]
 gi|281407271|gb|EFB37532.1| thymidylate kinase [Clostridium thermocellum JW20]
 gi|316941715|gb|ADU75749.1| thymidylate kinase [Clostridium thermocellum DSM 1313]
          Length = 227

 Score = 42.7 bits (99), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 29/199 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L I   G + +GK T  + L   L ++ Y V     P     + A   + L+    
Sbjct: 1   MKGKLIIIESGADASGKATQTNKLYERLVQEGYKVKKITFPNYDSDSSALVKMYLNG--- 57

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---D 110
           +FG +   +        +A  R          A  +G I+L DR+  S+  +Q  +    
Sbjct: 58  DFGKDPNDVSPYVASTFYAVDRFASYRTEWGQAYNDGWIILADRYTTSNMVHQAAKIKDM 117

Query: 111 SSQHLFLDSLQ--EISVQEV-MPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFER 164
             +  FLD L   E  + ++ +PDC I LD+P       +K   N+++          ++
Sbjct: 118 EEKDRFLDWLWNFEFEIYKLPVPDCVIFLDMPPSFSRELMKERANKFTGE--------QK 169

Query: 165 KDVMIHEKRRQIFLDIARN 183
           KD  IHE+  +  ++  RN
Sbjct: 170 KD--IHERNDEYLVESYRN 186


>gi|328853928|gb|EGG03063.1| hypothetical protein MELLADRAFT_44639 [Melampsora larici-populina
           98AG31]
          Length = 222

 Score = 42.7 bits (99), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 87/234 (37%), Gaps = 33/234 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G F+  EG++  GK+T   +L   L      V + R P          H  L+   D 
Sbjct: 5   NRGAFVVIEGLDRCGKSTQCKILADRLTNAGRSVELMRFPDRETVIGKMIHSYLNQESD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE----RDSSQHLFL 117
               A  ++FAA R +      +  L  G  L+CDR+  S  A+       R   Q    
Sbjct: 64  LDDHAIHLLFAANRWE------KRHLQSGTTLICDRYAFSGVAFTSAKFQLRTPPQPESF 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRR 174
            SL        +PD  I L +P++  + R    Q RY           E++D+    KR+
Sbjct: 118 TSLSSPDRGLPLPDLVIFLTMPMEATVTRGGFGQERY-----------EKEDLQAEVKRQ 166

Query: 175 QIFLDIARNQPDRCHI------VDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             F  +      R H       ++++ S   V   I   V  L+  ++ P   K
Sbjct: 167 --FEQVVEPAFTRLHGQGRWVEINASGSIDEVTCRISKTVDRLLGSKLDPAVGK 218


>gi|240172610|ref|ZP_04751269.1| thymidylate kinase [Mycobacterium kansasii ATCC 12478]
          Length = 214

 Score = 42.7 bits (99), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T    L+   Q     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAVEGVDGAGKRTLTVRLRAAFQAVGKSVVTLAFPRYGRSVTADIAAEALHGQHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGER--DSSQHLFL 117
             A A A +FA   LD        A +     +++ DR++ S+ AY   R  + +    +
Sbjct: 61  SSAYAMATLFA---LDRAGAAAEIAELRRNYDVVILDRYVASNAAYSAARLREDAGGPAV 117

Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
             +Q+I  Q +   +PD  ++L +P D+  +R ++R         D +ER D
Sbjct: 118 AWVQQIEYQRMGLPVPDWQVLLAVPADLAAQRARSRAEADPGRARDSYERDD 169


>gi|315925896|ref|ZP_07922101.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620717|gb|EFV00693.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 231

 Score = 42.7 bits (99), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            +G  I  EG++G+GK T    L  R   +    + V        ++   RH L      
Sbjct: 5   QAGKLIVIEGVDGSGKQTQSQRLYGRLAAQGKRVLRVAYPRYDEDSSAMVRHYL----AG 60

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---D 110
           +FG + +A+        FAA R       I P L  G +++ DR+  ++  +Q  +    
Sbjct: 61  DFGEDPDAVSPYVAATFFAADRYASYRQEIGPFLAGGGLVIADRYTTANMLHQAGKIADA 120

Query: 111 SSQHLFLDSLQEISVQEV---MPDCTIILDLP 139
           +++  FLD L++   + +    PD  I LD+P
Sbjct: 121 AARQAFLDWLEDYEFRLLGLPRPDAVIYLDMP 152


>gi|187933942|ref|YP_001885545.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B]
 gi|187722095|gb|ACD23316.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B]
          Length = 208

 Score = 42.7 bits (99), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 35/209 (16%)

Query: 9   FEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           FEGI+  GKTT I  LK R  +   Y+  +   PG           +     +E      
Sbjct: 16  FEGIDNVGKTTIIKELKGRICKEMGYECEIVAFPGNEERTLGG--FVYDIHHNEKRYIDY 73

Query: 68  AIVFAAARLDHVE---NVIRPALME----GKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +I  A+ +L HV    ++I+  LME     KI++ DRF  S+YAY              L
Sbjct: 74  SINDASLQLLHVASHIDLIQRKLMEKYSSSKIIMMDRFWWSTYAYG---------LSGGL 124

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSL--RESACLDYFERKDVMIHEKRRQIF 177
           +   V  ++         P  I  +++  N+  L  R+    DY   KD++I +  R   
Sbjct: 125 KSNVVSAILA--------PELICWEKINVNKIFLIERKDREKDYEADKDILIMQNYR--- 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILN 206
            D+AR  P +C I+++  S +     I N
Sbjct: 174 -DLARKNP-KCQIINNDGSLEETTNMIFN 200


>gi|294793438|ref|ZP_06758575.1| dTMP kinase [Veillonella sp. 3_1_44]
 gi|294455008|gb|EFG23380.1| dTMP kinase [Veillonella sp. 3_1_44]
          Length = 228

 Score = 42.7 bits (99), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 22/220 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+    EFG
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYNSGAAMPIKMYLAG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQ 113
            +   +       ++A  R              G I++ DR+  S+  +Q  +      +
Sbjct: 59  KDVHDVNPYVASSMYAIDRFASFRTDWEQFYNNGGIIIADRYTTSNMVHQMVKYDDLKER 118

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD---V 167
             FLD L++   Q+     PD   +LD+P+++    +  R         D  E      V
Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEVLMAERTGKTGGNTGDIHEGNHAYLV 178

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
            +H+   ++   + R Q  R    D A S Q     I  I
Sbjct: 179 AVHDAYEEL---VKRYQWHRIPCADKAKSSQYTLRTIEEI 215


>gi|213409950|ref|XP_002175745.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
 gi|212003792|gb|EEB09452.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
          Length = 209

 Score = 42.7 bits (99), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 18/208 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G F+ FEG++ +GK+T   LLK+ L  +     + R P  GT   +     L +   ++ 
Sbjct: 3   GKFVVFEGLDRSGKSTQAELLKKALIDRGQRAILLRFPDRGTTIGKQIDAYLKNK--NKL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EA  ++F+A R + + + I  AL +G   + DR+  S  A+     +++ +  D  ++
Sbjct: 61  PDEAIHLLFSANRWE-LASTIEAALADGVHCIVDRYSFSGVAFS----AAKGMDWDWCKQ 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                  PD  +   +  +I  KR      RY       L  F+R     +   RQ F+ 
Sbjct: 116 PERGLPSPDIVLFFQVDPNIASKRAGFGNERYE------LPVFQRTVAEKYALLRQEFVK 169

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207
             R   D   ++D   S + V   IL I
Sbjct: 170 -ERKNDDSWLMIDGNQSIEQVHLKILTI 196


>gi|219684919|ref|ZP_03539860.1| thymidylate kinase [Borrelia garinii PBr]
 gi|219671657|gb|EED28713.1| thymidylate kinase [Borrelia garinii PBr]
          Length = 202

 Score = 42.7 bits (99), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 24/210 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      +  +  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSITNKLKTLCNDES-RYYFTKEPSNGIIGKMIKEQLMNFE-NPLKES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + K ++ DR+L SS AYQG              E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q     +     D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ-----KNRTQSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSFQ----SVATNILNIV 208
               + +++   +S +      A  I N++
Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLI 200


>gi|296327936|ref|ZP_06870471.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154892|gb|EFG95674.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 225

 Score = 42.7 bits (99), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNE 116

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  ERKD  
Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSERKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|294791584|ref|ZP_06756732.1| dTMP kinase [Veillonella sp. 6_1_27]
 gi|294456814|gb|EFG25176.1| dTMP kinase [Veillonella sp. 6_1_27]
          Length = 228

 Score = 42.7 bits (99), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 22/220 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+    EFG
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQ 113
            +   +       ++A  R              G I++ DR+  S+  +Q    +    +
Sbjct: 59  KDVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDPKER 118

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD---V 167
             FLD L++   Q+     PD   +LD+P+++    +  R         D  E      V
Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEGNHAYLV 178

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
            +H    ++   + R Q  R    D A S Q     I  I
Sbjct: 179 AVHGAYEEL---VKRYQWHRIPCADKAKSSQYTLRTIEEI 215


>gi|219685925|ref|ZP_03540727.1| dTMP kinase [Borrelia garinii Far04]
 gi|219672537|gb|EED29574.1| dTMP kinase [Borrelia garinii Far04]
          Length = 202

 Score = 42.7 bits (99), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 24/210 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      +  +  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSITNKLKTLCNDES-RYYFTKEPSNGIIGKMIKEQLMNFE-NPLKES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + K ++ DR+L SS AYQG              E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q     +     D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ-----KNRTQSDIFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSFQ----SVATNILNIV 208
               + +++   +S +      A  I N++
Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLI 200


>gi|19704658|ref|NP_604220.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714964|gb|AAL95519.1| Thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 225

 Score = 42.7 bits (99), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNE 116

Query: 112 SQHLFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  ERKD  
Sbjct: 117 KKDEYLKWLVDLEYNKNEIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSERKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus
           kodakarensis KOD1]
 gi|73919452|sp|Q5JJC8|SRP54_PYRKO RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus
           kodakarensis KOD1]
          Length = 448

 Score = 42.4 bits (98), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 9/74 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64
           GI+G+GKTT ++ L R+LQ++ Y V V    T  PG   A    R +L   G++ FG   
Sbjct: 107 GIQGSGKTTSVAKLARYLQKRGYKVGVVCSDTWRPG---AYYQLRQLLDPFGIEVFGDPE 163

Query: 65  EAEAIVFAAARLDH 78
           E +A+  A   ++H
Sbjct: 164 EKDAVKLAREGVEH 177


>gi|170582308|ref|XP_001896072.1| thymidylate kinase [Brugia malayi]
 gi|158596802|gb|EDP35082.1| thymidylate kinase, putative [Brugia malayi]
          Length = 213

 Score = 42.4 bits (98), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 15/206 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG + AGK+     L   ++    DV +   P  +          L   V+   
Sbjct: 7   GAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLKKEVEMDP 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EA  +VFAA R   +  ++   L++G  L+ DR+  S  AY   +  + ++ ++  +  
Sbjct: 67  KEAH-LVFAANR-QALMPLMMKKLLKGTHLVVDRYAYSGIAYTLAK-GADNITMEWAKLA 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLDIAR 182
            + E+ PDC I  +L  +   KR         S   D  ER D      K  ++   +A 
Sbjct: 124 DMGELRPDCVIYFNLSFEEAQKR---------SGFGD--ERFDFGNFQGKVSKVMEQLAD 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
              D   +VD++ + + ++ N+ N+V
Sbjct: 173 EDRDLWKVVDASLTVEEISENVWNLV 198


>gi|257126449|ref|YP_003164563.1| thymidylate kinase [Leptotrichia buccalis C-1013-b]
 gi|257050388|gb|ACV39572.1| thymidylate kinase [Leptotrichia buccalis C-1013-b]
          Length = 225

 Score = 42.4 bits (98), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL + L+    +  V +       + A+  V +     EFG
Sbjct: 2   GKLIIIEGTDGSGKQTQTELLYKKLKEIKGEEKVKKISFPNYESRASEPVKMYLA-GEFG 60

Query: 64  AEAEAI-VFAAA------RLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDS 111
             AE++  +AA+      R    +         G I++ DR+  S+  +Q      E++ 
Sbjct: 61  KTAESVNAYAASVLYSIDRFASFKTEWEEFYNNGGIVISDRYTISNMIHQVPKILDEKEK 120

Query: 112 SQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            ++L +L  L+   +    PD    LD+P +   K ++NR
Sbjct: 121 EKYLEWLVDLEWGKIGIPKPDIVFFLDIPFEFSQKLMKNR 160


>gi|307109187|gb|EFN57425.1| hypothetical protein CHLNCDRAFT_20952 [Chlorella variabilis]
          Length = 230

 Score = 42.4 bits (98), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLS-CGVDE 61
           G FI FEG + AGK+T   +L   LQ +     + R P   TP  +     L S   +D+
Sbjct: 8   GAFIVFEGADRAGKSTQCQMLVEHLQAQGVAAELWRFPDRTTPIGKMINSYLTSQSDIDD 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
               A  ++F+A R +  E ++R  L EG  L+ DR+  S  A+
Sbjct: 68  ---AAVHLLFSANRWEKREELLRK-LHEGTTLVVDRYAYSGVAF 107


>gi|75706618|gb|ABA25861.1| thymidylate kinase [Phytoplasma sp. CPh]
          Length = 209

 Score = 42.4 bits (98), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 38/177 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT+ I+ L+                   P  +    +    G    G E
Sbjct: 4   LIVFEGLDGSGKTSLINYLQ-------------------PQLKTPHQLYQGLGSSSLGKE 44

Query: 66  AEAIVFAAARLDHVENV---------IRPALM-EGKILLCDRFLDSSYAYQ---GERDSS 112
              +     ++D++            I+  L  + ++++ DR+L S+YAYQ     ++  
Sbjct: 45  IRDLFLNFQQVDYLTRFYLSLANMAQIQAELFKKNQLIILDRWLPSTYAYQLFPFSKEKQ 104

Query: 113 QHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163
           Q   L  + +++ + ++  PD  I LD+   IG  R + + +    L E   L YF+
Sbjct: 105 QLFPLKKIFKLNHETILNKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERKSLTYFQ 161


>gi|16975316|pdb|1E9F|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Adp
          Length = 217

 Score = 42.4 bits (98), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 19/204 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G  I  EG++GAGK+T    L   L    +   + R P    + E  +  LLS  +    
Sbjct: 9   GALIVLEGVDGAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  
Sbjct: 65  DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR + R  L       + ER     H    Q+  D 
Sbjct: 121 KQPDVGLPKPDLVLFLQLQLADAAKRGRARGELERYENGAFQERALRCFH----QLMKDT 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
             N      +VD++ S ++V  +I
Sbjct: 177 TLN----WKMVDASKSIEAVHEDI 196


>gi|251771465|gb|EES52042.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum]
          Length = 220

 Score = 42.0 bits (97), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 19/218 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVD 60
           G  I  EGI+G+GK+T + LL  +LQ K + V        P  +P    A+   +     
Sbjct: 11  GRLIVVEGIDGSGKSTQLDLLSDYLQSKGFGVLKSAWNSSPDISPIIRKAKKKQV----- 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A +++ AA         I PA+  G I+L DR++ ++ A    R   +   L + 
Sbjct: 66  -LTPYAFSLLHAADFSFRYTYEILPAMEAGMIVLSDRYIYTAIARDCARGLPRPWLLSNF 124

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYF----ERKDVMIHEKRRQ 175
                  ++PD T +  +  +   +R+    S++   A LD       R+  ++ + R  
Sbjct: 125 NF----AIVPDLTFLFRVDPETSYQRITRTRSIKFYEAGLDMELSTDPRESYILFQSRVL 180

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              D  R +    H+VD+  S +   T +  ++  +++
Sbjct: 181 AEYDNLR-ETHGFHVVDATLSLEKTQTRMRRLLSPIIR 217


>gi|172040159|ref|YP_001799873.1| thymidylate kinase [Corynebacterium urealyticum DSM 7109]
 gi|171851463|emb|CAQ04439.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 231

 Score = 42.0 bits (97), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 23/179 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLSCG--V 59
           + I+FEGI+GAGK T ++ L+  L  +      V   R      A  A R +    G  +
Sbjct: 1   MIIAFEGIDGAGKNTLVTALEAELLARELPVARVSFPRYEDSVHAQLAQRALTGQMGDLI 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---------- 109
           D       A +FA  R +  E  +     +G I+L DRF+ S+ AY   R          
Sbjct: 61  DSI--HGMATLFALDRAEVAEQ-LEDLDADGYIVLMDRFVASNAAYSAARLAEEATGGAE 117

Query: 110 --DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
             + +QH  ++ ++ + V ++   +PD  +++D   ++  +R ++R     +   D +E
Sbjct: 118 PLEPAQHPVVEWVRSLEVDDLGSPVPDLQVLVDASAEVAGERAKSREQQDAARTRDAYE 176


>gi|84995356|ref|XP_952400.1| thymidylate kinase [Theileria annulata strain Ankara]
 gi|65302561|emb|CAI74668.1| thymidylate kinase, putative [Theileria annulata]
          Length = 214

 Score = 42.0 bits (97), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEF 62
           G  I FEGI+ +GK+T I+LL + L  +N    V   P   TP  +  R  L +   +  
Sbjct: 9   GKLIVFEGIDRSGKSTQINLLSQKLSEENIKNEVLSFPYKTTPTGKLLREYLRNRD-ESI 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             +A  ++F+A R + +  +I+  L  G  ++ DR+  S  AY
Sbjct: 68  PKQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAY 109


>gi|227505511|ref|ZP_03935560.1| thymidylate kinase [Corynebacterium striatum ATCC 6940]
 gi|227197875|gb|EEI77923.1| thymidylate kinase [Corynebacterium striatum ATCC 6940]
          Length = 204

 Score = 42.0 bits (97), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 21/175 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-------C 57
           + IS EGI+GAGK T +  +K+ L   + +V+V     G P  E + H  L+        
Sbjct: 1   MLISIEGIDGAGKNTLVQRIKKEL---SVEVNVL----GFPRYEESVHAQLAQDALYGRM 53

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLF 116
           G     A A A +FA  RL   E ++  A  E K +L+ DR++ S+ AY   R  +  + 
Sbjct: 54  GDLTDSAFAMATLFALDRLGAKERLL--AAQESKDLLILDRYVASNAAYSAARLGTDEV- 110

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           +D + ++         P   I LD  V++   R  +R     +   D +E+   +
Sbjct: 111 IDWVFDLEFGRFGLPKPQLQIFLDTDVELAAARATSRAEEDSTRVRDRYEKDSTL 165


>gi|307692944|ref|ZP_07635181.1| putative thymidylate kinase [Ruminococcaceae bacterium D16]
          Length = 222

 Score = 42.0 bits (97), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 15/160 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I FEG +G+GK+T    L R + +   +      P     + A   + L+    EF
Sbjct: 2   AGRLIVFEGTDGSGKSTQFQALCRRVTQSGREYQKLVFPQYNEPSSALIRMYLA---GEF 58

Query: 63  GAE-------AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH- 114
           G         A +  +A  R   ++ V      +G ++L DR+  S+  +Q  + + Q  
Sbjct: 59  GTHPQDVNPYAASAFYAVDRYASLKKVWGEYYEQGGLVLTDRYTTSNAVHQAVKCAPQER 118

Query: 115 ----LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
                +LD  +   +    PD  + LD+P +  ++ ++ R
Sbjct: 119 EAFLRWLDDFEHDKLGLPRPDLVLYLDMPTERAVELLRRR 158


>gi|260577914|ref|ZP_05845844.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734]
 gi|258603934|gb|EEW17181.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734]
          Length = 216

 Score = 42.0 bits (97), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDE 61
           + +SFEG++GAGK T ++ +++ L  +   V      R     PA  A   +  + G   
Sbjct: 1   MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQ----HL 115
                 A +FA   LD  E     A    +G ++L DR+  S+ AY   R          
Sbjct: 61  HSVHGMATLFA---LDRAEIGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGE 117

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++  L++  +    PD  I++D+  ++  +R ++R +  ++   D +ER D  + E+   
Sbjct: 118 WVTQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVC 176

Query: 176 IFLDIARNQ 184
            +  +A  Q
Sbjct: 177 AYRALAEQQ 185


>gi|291009673|ref|ZP_06567646.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338]
          Length = 214

 Score = 42.0 bits (97), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 25/204 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKN----------YDVHVTREPGGTPAAEAARHV 53
           G  I  EG++GAGK T    L   L R+           YD  V  E      AEA R  
Sbjct: 2   GRLIVIEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAE----LVAEALRGG 57

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DS 111
               G    G    A+++A  R     + +R  L    ++L DR++ S+ AY   R    
Sbjct: 58  HGDLGDSVHGM---AVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQD 113

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           +Q  F+   +E+ ++      PD  ++L +P ++   R  +R         D FE  D  
Sbjct: 114 AQGDFVAWTEELEIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFE-SDAS 172

Query: 169 IHEKRRQIFLDIA-RNQPDRCHIV 191
           + E+  +++  +A RN      +V
Sbjct: 173 LQERCGEVYAQLAERNWWSPWRVV 196


>gi|224534161|ref|ZP_03674741.1| dTMP kinase [Borrelia spielmanii A14S]
 gi|224514586|gb|EEF84900.1| dTMP kinase [Borrelia spielmanii A14S]
          Length = 202

 Score = 42.0 bits (97), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I+ LK     ++   + T+EP      +  +  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSIINKLKALCNDES-RYYFTKEPSSGIVGKMIKEQLMNFK-NPLKES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGE 108
             A ++AA R DH+     ++     +   ++ DR+L SS AYQG+
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSTKVITDRYLFSSIAYQGK 111


>gi|282848946|ref|ZP_06258335.1| dTMP kinase [Veillonella parvula ATCC 17745]
 gi|282581221|gb|EFB86615.1| dTMP kinase [Veillonella parvula ATCC 17745]
          Length = 228

 Score = 42.0 bits (97), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+    EFG
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLA---GEFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQ 113
                +       ++A  R              G I++ DR+  S+  +Q    +    +
Sbjct: 59  KNVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDNPKER 118

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDI 142
             FLD L++   Q+     PD   +LD+P+++
Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEV 150


>gi|237744136|ref|ZP_04574617.1| thymidylate kinase [Fusobacterium sp. 7_1]
 gi|229431365|gb|EEO41577.1| thymidylate kinase [Fusobacterium sp. 7_1]
          Length = 225

 Score = 42.0 bits (97), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNE 116

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|258650987|ref|YP_003200143.1| major facilitator superfamily protein [Nakamurella multipartita DSM
           44233]
 gi|258554212|gb|ACV77154.1| major facilitator superfamily MFS_1 [Nakamurella multipartita DSM
           44233]
          Length = 725

 Score = 42.0 bits (97), Expect = 0.064,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 21/140 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT--REPGGTPAAEAARHVLLSCGV 59
           ++G  I+ EG + A    ++  +++ LQ   Y   V   REP  T         + S  V
Sbjct: 469 HAGALIAVEGTDAAATADYLKSIEQHLQETGYLTCVVSRREPSPT---------VRSAAV 519

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D     A+A+  +A   + +   + PAL +G ++LCD F+D        R  +  L  D 
Sbjct: 520 DPL---ADALRTSATLAELMATQVGPALEDGAVVLCDGFMDEFIV----RYRTLGLVEDD 572

Query: 120 LQEISVQEV---MPDCTIIL 136
           L  ++V  +    PD T+++
Sbjct: 573 LSRVAVWAISGLKPDLTVVV 592


>gi|313113917|ref|ZP_07799475.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623756|gb|EFQ07153.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 223

 Score = 42.0 bits (97), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 19/197 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           M+ G  I  EG++G+GK T   LL   L+ + + V     P     + A   + L+    
Sbjct: 1   MSKGKLIVLEGLDGSGKATQAKLLAAHLKEQGFSVREITFPNYESDSSALVKMYLAGQFG 60

Query: 60  ---DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
              D+  A A +  +A  R    +         G I++ DR+  S+  +Q  +   +   
Sbjct: 61  QHPDDVNAYAASSFYAVDRYASYKKDWGSFYENGGIIIADRYTTSNAVHQCSKLPPEQWE 120

Query: 116 -FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FL  L +     +    PD  I L +   +  K +  RY   ES       RKDV  HE
Sbjct: 121 SFLGWLFDFEFHLLGLPAPDEVIYLQVDPAVSQKLMTQRYHGDES-------RKDV--HE 171

Query: 172 KRRQIFLDIARNQPDRC 188
           K  + +L  +R   + C
Sbjct: 172 KDTE-YLARSRCAAEYC 187


>gi|302795849|ref|XP_002979687.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
 gi|300152447|gb|EFJ19089.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
          Length = 253

 Score = 42.0 bits (97), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 21/198 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ +GK++    L  FL+     V   R P  T A  ++    L  G  E  
Sbjct: 7   GALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGA-ELD 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     +   LM G  L+ DR+  S  A+   +       LD L+  
Sbjct: 66  DRAVHLLFSANRWEKRLQ-MEKKLMAGTTLVVDRYSYSGVAFSAAKG------LD-LEWC 117

Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              EV +P   ++L L +      V+  Y       LD+           ++++ L    
Sbjct: 118 KAPEVGLPAADLVLYLDISPEEAAVRGGYGDERYEQLDF-----------QKKVALQYKG 166

Query: 183 NQPDRCHIVDSAHSFQSV 200
            Q  R  IVD+  SF  V
Sbjct: 167 LQGKRWKIVDARQSFDQV 184


>gi|257467201|ref|ZP_05631512.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 222

 Score = 42.0 bits (97), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 35/232 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I  EG + +GK T   LL + FL        ++     +PA E  +  L      EF
Sbjct: 2   GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AGEF 57

Query: 63  GAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GER 109
           G  AE +       ++A  R   + ++       E  I + DR++ S+  +Q     G+ 
Sbjct: 58  GLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKE 117

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                ++L++L+    +   PDC I LD+P     + ++ R     +  +   E KD  I
Sbjct: 118 KEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD--I 170

Query: 170 HEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211
           HE+ R+      RN  +           C   D   S Q +   IL  V E+
Sbjct: 171 HERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 222


>gi|291522522|emb|CBK80815.1| thymidylate kinase [Coprococcus catus GD/7]
          Length = 223

 Score = 41.6 bits (96), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 8/153 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DEF 62
           FI  EG +G+GK T   LL   +  K  D      P     + A     L+      D+ 
Sbjct: 3   FIVIEGNDGSGKATQSQLLLETMLEKGIDARKLSFPNYQSDSSALVKGYLAGRYGKRDDI 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSL 120
              A A  +AA R+       +    +GK+++ DR+  S+  YQ        +  FL  L
Sbjct: 63  SPYAAASFYAADRIASYMEDWKRDYEKGKLIIADRYTTSNAIYQCARLPRMRRRRFLQWL 122

Query: 121 QEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
            E     +    PD  I LD+  DI ++ ++ R
Sbjct: 123 YEYEYDLLGLPEPDMVIYLDVDPDISMQLIEQR 155


>gi|330916235|ref|XP_003297345.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
 gi|311330039|gb|EFQ94563.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
          Length = 155

 Score = 41.6 bits (96), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 3/146 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG++ AGK+T    L   LQ     V   R P  T       +  LS G  
Sbjct: 1   MTRGKLIVFEGLDRAGKSTQCQKLVEDLQNDGMKVRHMRFPDRTTPIGQMINSYLS-GDS 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E       ++F+A R +   N I+  L  G  ++ DR+  S   Y   +     + L+  
Sbjct: 60  EQEDHVIHLLFSANRWE-AANSIQADLTAGTTIIIDRYYYSGCVYSAAK-QKHDMSLEWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146
           +   +    PD  I LD+  +   KR
Sbjct: 118 RNPELGLPRPDLCIFLDISAEDAAKR 143


>gi|257453209|ref|ZP_05618508.1| thymidylate kinase [Fusobacterium sp. 3_1_5R]
          Length = 222

 Score = 41.6 bits (96), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 35/232 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I  EG + +GK T   LL + FL        ++     +PA E  +  L      EF
Sbjct: 2   GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AGEF 57

Query: 63  GAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GER 109
           G  AE +       ++A  R   + ++       E  I + DR++ S+  +Q     G+ 
Sbjct: 58  GLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKE 117

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                ++L++L+    +   PDC I LD+P     + ++ R     +  +   E KD  I
Sbjct: 118 KEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD--I 170

Query: 170 HEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211
           HE+ R+      RN  +           C   D   S Q +   IL  V E+
Sbjct: 171 HERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 222


>gi|68536724|ref|YP_251429.1| thymidylate kinase [Corynebacterium jeikeium K411]
 gi|68264323|emb|CAI37811.1| tmk [Corynebacterium jeikeium K411]
          Length = 216

 Score = 41.6 bits (96), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 13/189 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDE 61
           + +SFEG++GAGK T ++ +++ L  +   V      R     PA  A   +  + G   
Sbjct: 1   MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGER---DSSQ-HL 115
                 A +FA   LD  E     A    +G ++L DR+  S+ AY   R   D ++   
Sbjct: 61  HSVHGMAALFA---LDRAEIGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGE 117

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++  L++  +    PD  I++D+  ++  +R ++R +  ++   D +ER D  + E+   
Sbjct: 118 WVTQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVC 176

Query: 176 IFLDIARNQ 184
            +  +A  Q
Sbjct: 177 AYRALAEQQ 185


>gi|254302827|ref|ZP_04970185.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323019|gb|EDK88269.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 225

 Score = 41.6 bits (96), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +        +  I++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYTDDYIIITDRYVTSNMIHQASKIKNNE 116

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|256027750|ref|ZP_05441584.1| thymidylate kinase [Fusobacterium sp. D11]
 gi|289765707|ref|ZP_06525085.1| thymidylate kinase [Fusobacterium sp. D11]
 gi|289717262|gb|EFD81274.1| thymidylate kinase [Fusobacterium sp. D11]
          Length = 225

 Score = 41.6 bits (96), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNE 116

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|227832501|ref|YP_002834208.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183633|ref|ZP_06043054.1| thymidylate kinase [Corynebacterium aurimucosum ATCC 700975]
 gi|227453517|gb|ACP32270.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975]
          Length = 206

 Score = 41.6 bits (96), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 11/186 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS-CGVDE 61
           + IS EGI+GAGK T   + +R  +    DV V   P    +  A+ A+  L    G   
Sbjct: 1   MLISIEGIDGAGKNT---ITQRLREELACDVEVLSFPRYEDSIHAQLAQEALYGRMGDLT 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 A +FA  R    E ++  A     +L+ DR++ S+ AY   R   + L +D + 
Sbjct: 58  DSVYGMATLFALDRRGAKEQLLAAAESTDSLLILDRYVASNAAYSSARVGGE-LIVDWIY 116

Query: 122 EISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           E+  +     +P   I LD  V +  +R   R +  E    D +ER D  +  +    + 
Sbjct: 117 ELEFERFGLPVPQLQIFLDTDVALAGQRAVARAAEDEGRNRDRYER-DAALQSRTAAAYR 175

Query: 179 DIARNQ 184
            +A  Q
Sbjct: 176 RLAEQQ 181


>gi|120402750|ref|YP_952579.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1]
 gi|119955568|gb|ABM12573.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1]
          Length = 211

 Score = 41.6 bits (96), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 22/191 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDE 61
           + I  EG++GAGK T  + L+   +     V     P      PA  AA  +  + G   
Sbjct: 1   MLIVIEGVDGAGKRTLTNGLRAAFESDGRSVATLAFPRYGVSVPADLAAEALHGAHGDLA 60

Query: 62  FGAEAEAIVFAAAR------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----D 110
               A A++FA  R      +DH+++          ++L DR++ S+ AY   R     D
Sbjct: 61  ESVYAMAVLFAMDRAGARDEIDHLKSAY-------DVVLLDRYVASNAAYSAARLHQGVD 113

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                ++  L+   ++   PD  ++LD+P ++  +R  +R +       D +ER D  + 
Sbjct: 114 GDVAAWVGDLEYGRLRLPKPDWQVLLDVPTELAAQRAVSRAAREADRARDAYERDD-GLQ 172

Query: 171 EKRRQIFLDIA 181
            +   ++ ++A
Sbjct: 173 RRTSAVYAELA 183


>gi|300120775|emb|CBK21017.2| unnamed protein product [Blastocystis hominis]
          Length = 208

 Score = 41.6 bits (96), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI  EG++ +GKT   S   R ++R N +  +T +  G P     R   +   ++
Sbjct: 1   MKRGVFIVIEGVDRSGKT---SQCHRIVERLNAE-DITAKFYGFP----NRTTQIGQQIN 52

Query: 61  EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           ++   A  I       +F+A R +  ++++   L  G  ++CDR++ S  AY   R    
Sbjct: 53  KYLQNATEIENHCVHLLFSANRWELSKSILED-LKNGVNIICDRYIASGVAYSVTRGLDM 111

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
              + S + +      PD T  L+LP++  ++R
Sbjct: 112 EWCIHSDKGLPA----PDVTFQLELPIEEQMRR 140


>gi|51599045|ref|YP_073233.1| thymidylate kinase [Borrelia garinii PBi]
 gi|51573616|gb|AAU07641.1| thymidylate kinase [Borrelia garinii PBi]
          Length = 202

 Score = 41.6 bits (96), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 24/210 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      +  +  L++   +     
Sbjct: 8   FYCIEGIDGSGKTSISNKLKTLCNDES-RYYFTKEPSNGIIGKMIKEQLMNFK-NPLKES 65

Query: 66  AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     ++     + K ++ DR+L SS AYQG              E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    +    +I  +R+Q     +     D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIKTDPNIAYERIQ-----KNRTQSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSFQ----SVATNILNIV 208
               + +++   +S +      A  I N++
Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLI 200


>gi|327267155|ref|XP_003218368.1| PREDICTED: thymidylate kinase-like [Anolis carolinensis]
          Length = 212

 Score = 41.6 bits (96), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T    L   L  K +   + R P  T         L+S  +++  
Sbjct: 6   GALIVLEGVDRAGKSTQSRRLVEALGAKGHRAELLRFPERTTKIGQ----LISSYLEKKN 61

Query: 64  AEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              +  V   F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  L+  
Sbjct: 62  NLEDHTVHLLFSANRWEQVP-LIKEKLNQGITLVVDRYAFSGVAFTG---AKENFSLEWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L      KR        E++             EK  Q + D+
Sbjct: 118 KQPDVGLPKPDVILFLQLNTSEAAKRGDFGSERYENSSF----------QEKVLQCYYDL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             ++     ++D++ + + +   I +IV E +Q+
Sbjct: 168 MEDKTLNWKVIDASKTIEDLHNEIKSIVEEAMQE 201


>gi|237742316|ref|ZP_04572797.1| thymidylate kinase [Fusobacterium sp. 4_1_13]
 gi|229429964|gb|EEO40176.1| thymidylate kinase [Fusobacterium sp. 4_1_13]
          Length = 228

 Score = 41.6 bits (96), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGT---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNK 116

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKEEYLRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|256076848|ref|XP_002574721.1| thymidylate kinase [Schistosoma mansoni]
 gi|238659934|emb|CAZ30954.1| thymidylate kinase [Schistosoma mansoni]
          Length = 235

 Score = 41.6 bits (96), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 9/113 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M+ G+F+  EG +  GKTT  SLL + L    QR+   V        TP        L  
Sbjct: 5   MSQGIFVVLEGADRVGKTTQASLLAKALSEITQRETLSVKFPDR--DTPLGHHLDSYL-- 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
            G+ +    A  ++F A R +  +  IR A+  G  ++ DR++ S  AY   +
Sbjct: 61  SGIGDINKHALHLLFTANRWER-QAEIRKAISNGIPVVADRYIYSGIAYTAAK 112


>gi|294785116|ref|ZP_06750404.1| dTMP kinase [Fusobacterium sp. 3_1_27]
 gi|294486830|gb|EFG34192.1| dTMP kinase [Fusobacterium sp. 3_1_27]
          Length = 225

 Score = 41.2 bits (95), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNE 116

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKEEYLRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|39939007|ref|NP_950773.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|39722116|dbj|BAD04606.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 204

 Score = 41.2 bits (95), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 39/178 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEGI+G+GKT+ I  L+                   P  +    +    G    G E
Sbjct: 4   LIVFEGIDGSGKTSLIHALQ-------------------PLLKTPHQLYQGLGSSSLGKE 44

Query: 66  AEAIVFAAARLDHVENV---------IRPALMEGK-ILLCDRFLDSSYAYQ----GERDS 111
              +     ++D++            I+  L + K +++ DR+L S+YAYQ     +   
Sbjct: 45  IRDLFLNFQQVDYLTRFYLSLANMAQIQVELFKNKQLIILDRWLPSTYAYQLFPFFKEKK 104

Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163
             +L L  +  I+ + ++  PD  I L++   IG  R + + S    L E   L YF+
Sbjct: 105 LTNLPLKQIFNINHETILKKPDLLIYLEIDPQIGKTRKKKQKSHQRDLIERKSLTYFQ 162


>gi|328867446|gb|EGG15828.1| thymidylate kinase [Dictyostelium fasciculatum]
          Length = 214

 Score = 41.2 bits (95), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPG-GTPAAEAARHVLLSCG 58
           M  GLFI FEG +  GK+T +  L  +L+     D  V R P   TP        L +  
Sbjct: 8   MKRGLFILFEGADRVGKSTQVQKLGDYLKNGLQLDAKVLRFPDRTTPTGSIINGYLQNT- 66

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
             +    A  +++AA R +  +N+++  L  G  ++ DR+  S  AY   +
Sbjct: 67  -TQLDDRAIHLLYAANRWEAKDNLMK-LLNSGTSIVVDRYSYSGVAYTAAK 115


>gi|40556108|ref|NP_955193.1| CNPV170 thymidylate kinase [Canarypox virus]
 gi|40233933|gb|AAR83516.1| CNPV170 thymidylate kinase [Canarypox virus]
          Length = 212

 Score = 41.2 bits (95), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/222 (19%), Positives = 95/222 (42%), Gaps = 16/222 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI  EG++ +GKT     L +++  K Y     + P          +  L   ++
Sbjct: 1   MQRGMFIVLEGLDRSGKTVQCEKLLQYMLEKGYKTESLKFPNRETEIGKVINSYLEKKIN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F+A R + + ++I+  L     L+ DR+  S  A+   ++   ++ L+  
Sbjct: 61  -INDRAIHLLFSANRWE-LADLIKDKLSHNINLIVDRYAFSGAAFTAAKN---NVSLEWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +       +PD  I LD+          +  S RE+  ++ +E       ++ R+ F D+
Sbjct: 116 KLTDSGLPLPDLVIFLDISA--------SESSDRENFGMERYET--ASFQDEVRKRFYDL 165

Query: 181 ARNQPD-RCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            +        ++D+  + + +   I  +V +++ K   P+ S
Sbjct: 166 IKGTDSINWKVIDATKTIEDIHEEIKLLVEDVIDKLNDPIGS 207


>gi|294658466|ref|XP_460810.2| DEHA2F10252p [Debaryomyces hansenii CBS767]
 gi|202953154|emb|CAG89151.2| DEHA2F10252p [Debaryomyces hansenii]
          Length = 218

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 53/236 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ +GK+T   +L              R PGG       R   +   ++
Sbjct: 1   MGRGQLILIEGLDRSGKSTQSGILSE------------RLPGGKLIKFPDRSTKVGSIIN 48

Query: 61  EFGAEAEA--------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--- 109
           E+   +E         ++F+A R +  ++++   L +G  ++ DR++ S  AY   +   
Sbjct: 49  EYLTNSELNLSDQTAHLLFSANRWELADSIVND-LNKGHFIVMDRYIYSGIAYSLAKSRF 107

Query: 110 --DSSQHLF-LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
             DSS  +  +D L         PD TI L L     L+ + NR    E    + +E+++
Sbjct: 108 SNDSSPEMASIDWLYSPDKGLPKPDLTIFLTL----SLEELSNRKGWGE----ERYEKEN 159

Query: 167 VMIHEKRRQIFLDIARNQPD-RCHIVDSAHSFQSVATNILNI------VWELVQKR 215
               +  +  FL++     D   HI+D          N LNI      +W+L++++
Sbjct: 160 --FQKSVKNCFLEVLNADNDASVHIID---------VNNLNIDQVTAKIWDLIEQK 204


>gi|223938821|ref|ZP_03630709.1| thymidylate kinase [bacterium Ellin514]
 gi|223892519|gb|EEF58992.1| thymidylate kinase [bacterium Ellin514]
          Length = 250

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 12/161 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I  EG +G+G++T I+ L  +L+      H T + G   +   +  +  +   +  
Sbjct: 40  AGKLIVVEGADGSGRSTQIARLVEWLEGCG---HATVQVGLKRSTLVSEELNQAQHGNIL 96

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                ++ +A    D +EN+I PAL  G ++L DR++ +  A    RD  + +    L+ 
Sbjct: 97  SHTTLSLFYATDFADQLENMILPALKAGFMVLADRYIYTLMA----RDLVRGMDEAWLKN 152

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +    ++PD    L++  +   + VQ  ++   S  LDY+E
Sbjct: 153 LYSIALVPDAVFYLNVSPE---QLVQRNFAKNHS--LDYWE 188


>gi|254671909|emb|CBA04216.1| Thymidylate kinase [Neisseria meningitidis alpha275]
          Length = 81

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
           PD T++LD+P+++ + R+       +S   D FE++      + R ++L+ A   P+R  
Sbjct: 3   PDLTLLLDVPLEVSMARIG------QSREKDRFEQEQADFFMRVRSVYLNRAAACPERYA 56

Query: 190 IVDSAHSFQSVATNILNIV 208
           I+DS  S   V  NI  ++
Sbjct: 57  IIDSNRSLDEVRNNIEKVL 75


>gi|34764303|ref|ZP_00145140.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|27885923|gb|EAA23262.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
          Length = 228

 Score = 41.2 bits (95), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLGGT---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-----ER 109
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q       +
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNK 116

Query: 110 DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           +  ++L +L  L+    +   PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKEEYLRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|256845595|ref|ZP_05551053.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2]
 gi|256719154|gb|EEU32709.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2]
          Length = 228

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLGGT---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-----ER 109
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q       +
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNK 116

Query: 110 DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           +  ++L +L  L+    +   PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKEEYLRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|304438544|ref|ZP_07398483.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368382|gb|EFM22068.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 231

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 22/154 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----- 55
           M  G     E  +G+GK T   LL + L R+ + V     P    AA+A+  V +     
Sbjct: 1   MARGKLFIIEAGDGSGKETQTRLLTQRLIREGHRVRAVAFP--DYAADASMPVRMYLRGD 58

Query: 56  -SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-------G 107
                DE    A +  FA  R        R     G I+L DR+  S+  +Q        
Sbjct: 59  FGTQADEVNPYAASTFFAVDRYASYRMKWREDYAAGTIILADRYTTSNMVHQAVKIGDAA 118

Query: 108 ERDSSQHLFLDSLQEISVQEV---MPDCTIILDL 138
           ERD+    FLD L +    ++   +PD    LD+
Sbjct: 119 ERDA----FLDWLYDFEFNKLGLPVPDAVFFLDM 148


>gi|262068171|ref|ZP_06027783.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693]
 gi|291378114|gb|EFE85632.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693]
          Length = 224

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L      +
Sbjct: 2   GKIIVVEGTDSSGKETQTKLLYERV-KKVYDKTIKISFPNYDSPACEPVKMYLAG----K 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +     
Sbjct: 57  FGTDATKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDTE 116

Query: 112 SQHLFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           ++  +L+ L ++  ++     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 AKDDYLNWLVDLEYKKNEIPEPDMVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|313893344|ref|ZP_07826918.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442113|gb|EFR60531.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 228

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 16/152 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+    EFG
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLIKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-- 114
            +   +       ++A  R              G I++ DR+  S+  +Q  +   Q   
Sbjct: 59  KDVHDVNPYVASSMYAIDRFASFRTDWEEFYKNGGIIIADRYTTSNMVHQMVKYDDQKER 118

Query: 115 -LFLDSLQEISVQEV---MPDCTIILDLPVDI 142
             FLD L++   ++     PD   +LD+P+++
Sbjct: 119 TAFLDWLEDFEFKKFGLPTPDAVCLLDMPLEV 150


>gi|169776481|ref|XP_001822707.1| thymidylate kinase [Aspergillus oryzae RIB40]
 gi|83771442|dbj|BAE61574.1| unnamed protein product [Aspergillus oryzae]
          Length = 225

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 28/209 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK++    L+ +LQ   + V   R P  T A        L  G  +  
Sbjct: 12  GALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLR-GQSQLD 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++F+A R + +  VI   + +G  ++ DR+  S   Y                  
Sbjct: 71  DHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVY------------------ 111

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYF--ERKDVMIHEKR-RQI 176
           S  + +P  ++      ++GL R       R S  E+A    F  ER +    + R R++
Sbjct: 112 SAAKGIPTLSLGWAWQPEVGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVREL 171

Query: 177 FLDIARNQPDR-CHIVDSAHSFQSVATNI 204
           F  +   QP+   H+V++  SFQ V+  I
Sbjct: 172 FQTLFDLQPNGDIHVVNAGRSFQEVSEEI 200


>gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus
           NA1]
 gi|229558607|sp|B6YSS1|SRP54_THEON RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus
           NA1]
          Length = 448

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 9/74 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64
           GI+G+GKTT I+ L R+ Q++ Y V +    T  PG   A +  + ++   G++ FG   
Sbjct: 107 GIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPG---AYQQLKQLVEPFGIEVFGDPE 163

Query: 65  EAEAIVFAAARLDH 78
           E +AI  A   ++H
Sbjct: 164 EKDAIKLAKEGVEH 177


>gi|283481645|emb|CAZ69761.1| putative thymidylate kinase [Emiliania huxleyi virus 99B1]
          Length = 327

 Score = 40.8 bits (94), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVD-- 60
           G     EG +G GK T  +LL+R L++++Y V     P          R +L     D  
Sbjct: 106 GRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGDIK 165

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  A ++A  R   V++++   +  G  ++ DR++ S+ A+QG  +     ++   
Sbjct: 166 NLDPFLFASLYAQNRWS-VKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVAKQ 224

Query: 121 QEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            E+   E++     +  I LDLP ++  +   ++ + R  A LD  E   +      R+I
Sbjct: 225 TELFENEILGLPHANHIIYLDLPPEVA-RTAMDKDTTR--AALDQNELAPLEYKNNVRKI 281

Query: 177 FLD 179
           +L+
Sbjct: 282 YLE 284


>gi|255536995|ref|XP_002509564.1| thymidylate kinase, putative [Ricinus communis]
 gi|223549463|gb|EEF50951.1| thymidylate kinase, putative [Ricinus communis]
          Length = 264

 Score = 40.8 bits (94), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++ +GKT+    L  +L+R  ++  + R P  T          LS    +  
Sbjct: 59  GAFIVLEGLDRSGKTSQCGKLVSYLERLGHETELWRFPDRTTTIGQMISAYLS-NQSQLD 117

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++++A R +   +++   L  G  L+ DR+  S  A+     +++ L  +  +  
Sbjct: 118 DRTIHLLYSANRWEK-NSLMETKLKSGTTLIVDRYSYSGVAF----SAAKGLDFEWCKAP 172

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            +  + PD  + LD+P +   +R
Sbjct: 173 EIGLLAPDLVLYLDIPPEKAAER 195


>gi|302851470|ref|XP_002957259.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
           nagariensis]
 gi|300257509|gb|EFJ41757.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
           nagariensis]
          Length = 546

 Score = 40.8 bits (94), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDE 61
           G  I FEG +  GKTT    L   L+ +  D  + R P  + +   A +  L     +D+
Sbjct: 13  GALIVFEGGDRCGKTTQCRKLVERLRSQGVDAVMWRFPDRSTSIGQAINAYLVEQSHMDD 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             A    ++FAA R++  E ++R  L+ G+  L+ DR+  S  AY   +    HL +D  
Sbjct: 73  AVAH---LLFAANRMEKREEMLR--LLSGRTTLVVDRYSYSGVAYTAAK-GVPHLSMDYC 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRY 151
           + + V     D  I +D+  +    R    Q RY
Sbjct: 127 RAVEVGLPAADLVIFMDMTAEATAARGGYGQERY 160


>gi|237740226|ref|ZP_04570707.1| thymidylate kinase [Fusobacterium sp. 2_1_31]
 gi|229422243|gb|EEO37290.1| thymidylate kinase [Fusobacterium sp. 2_1_31]
          Length = 224

 Score = 40.8 bits (94), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L      +
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAG----K 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       ++  +++ DR++ S+  +Q  +     
Sbjct: 57  FGTDATKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDAE 116

Query: 112 SQHLFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           ++  +L+ L ++  ++     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 AKDEYLNWLVDLEYKKNEIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|54026585|ref|YP_120827.1| thymidylate kinase [Nocardia farcinica IFM 10152]
 gi|54018093|dbj|BAD59463.1| putative thymidylate kinase [Nocardia farcinica IFM 10152]
          Length = 215

 Score = 40.8 bits (94), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 14/188 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           GL I+ EG++GAGK T    +   L  +         P  G +  A+ A   L     D 
Sbjct: 2   GLLIALEGLDGAGKRTLTDAVVAALGARGVRAATLGFPRYGRSVHADLAAEALHGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116
                A A++FA   LD  E  + +  AL +  I++ DR++ S+ AY   R   S+    
Sbjct: 62  ASSVYAMALLFA---LDRAEARDELSKALADNDIVILDRYVASNAAYNAARLHQSATGEI 118

Query: 117 LDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +    ++         PD  ++LD+  ++  +R + R  L     LD +ER D  +  + 
Sbjct: 119 VGWTADLEFGRFGLPEPDVQLLLDVDTEVAAERARRRTELDADRPLDAYER-DGGLQRRT 177

Query: 174 RQIFLDIA 181
             ++ ++A
Sbjct: 178 LAVYRELA 185


>gi|71030486|ref|XP_764885.1| thymidylate kinase [Theileria parva strain Muguga]
 gi|68351841|gb|EAN32602.1| thymidylate kinase, putative [Theileria parva]
          Length = 213

 Score = 40.8 bits (94), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEGI+ +GK+T I LL + L  +N    V   P  T          L    +   
Sbjct: 9   GKLIVFEGIDRSGKSTQIRLLSQKLSEENIKNEVLTFPYKTTPTGKLLRSYLGNRDESIP 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
            +A  ++F+A R + +  +I+  L  G  ++ DR+  S  AY
Sbjct: 69  KQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAY 109


>gi|241613926|ref|XP_002407467.1| thymidylate kinase, putative [Ixodes scapularis]
 gi|215502816|gb|EEC12310.1| thymidylate kinase, putative [Ixodes scapularis]
          Length = 214

 Score = 40.8 bits (94), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 15/197 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+ FEG +  GKTT I LL   L +  +       P  +          L    D   
Sbjct: 7   GLFVVFEGCDRTGKTTQIKLLSESLSKLGHKTETVAFPNRSTTTGTLLDSYLKASTD-LD 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +   +++   L     ++ DR+  S  A+     +++ L     Q+ 
Sbjct: 66  DHAVHLLFSANRWEAAPSLL-STLARNTTVIADRYAYSGVAFS----AAKSLDFRWCQQC 120

Query: 124 SVQEVMPDCTIILDLPVD-------IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            V    PD  + + +P +        G +R +N  S +E    +Y     +   +  R I
Sbjct: 121 DVGLPEPDLVLYMSVPPETLAARGGFGEERYENS-SFQEKVRANYNHLASLEA-KGGRWI 178

Query: 177 FLDIARNQPDRCHIVDS 193
            +D +++  +  HI++S
Sbjct: 179 EVDCSKSVQEVHHIIES 195


>gi|237845145|ref|XP_002371870.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
 gi|211969534|gb|EEB04730.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
 gi|221480782|gb|EEE19211.1| thymidylate kinase, putative [Toxoplasma gondii GT1]
 gi|221501447|gb|EEE27223.1| thymidylate kinase, putative [Toxoplasma gondii VEG]
          Length = 273

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  + FEGI+ +GK+T   L    L ++ +   + R P   TP  +     L +      
Sbjct: 9   GCLVVFEGIDRSGKSTQARLAYERLTKEGHAAELIRFPDRTTPIGQVLDRFLANASWSSD 68

Query: 63  GAEAEA-------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           G   +        ++FAA R +    ++R AL EG+ +L DR+  S  AY
Sbjct: 69  GQHPQVPPPQLTHLLFAANRWEAQARILR-ALGEGRTVLVDRYSFSGIAY 117


>gi|167042320|gb|ABZ07049.1| putative Thymidylate kinase [uncultured marine crenarchaeote
           HF4000_ANIW97J3]
          Length = 292

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 14/152 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVD 60
           S L I+ EG++ AGK T   +L + L+R      V   P  +     E   H+    G  
Sbjct: 99  SVLIIAIEGLDQAGKKTQTEMLVKALRRIKIKTAVFSFPDYSTIIGKEIKNHL---SGKR 155

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F  E    ++AA RL+ +E  I+ A  +  +L+ +R+  S+  Y G  +  +  +L  L
Sbjct: 156 NFPPEIIHYLYAANRLEKLEE-IQKASSKNSVLVMNRYYHSNLVY-GIANGLKEKWLQKL 213

Query: 121 QEISVQEVMP--DCTIILDLPVDIGLKRVQNR 150
                +E +P  D  I+LD   D    R +++
Sbjct: 214 -----EEGLPKADLVIVLDASQDDSFSRKKSK 240


>gi|218513048|ref|ZP_03509888.1| thymidylate kinase [Rhizobium etli 8C-3]
          Length = 51

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 16/35 (45%), Positives = 26/35 (74%)

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           FLDIA  +P+RCH+V++  + +++A  IL IV +L
Sbjct: 1   FLDIAAREPERCHVVNAMQTEEAIAAQILAIVKQL 35


>gi|195436525|ref|XP_002066218.1| GK22056 [Drosophila willistoni]
 gi|194162303|gb|EDW77204.1| GK22056 [Drosophila willistoni]
          Length = 209

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI FEG + +GKTT   LL   LQ      VH+      +       +  L+   
Sbjct: 1   MQRGAFIVFEGCDRSGKTTQSRLLVEKLQANGVSTVHLNFPERKSSQIGQVINSYLTNSQ 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           D    E   ++F+A R +H+ N +R  L  G  L+ DR+  S  AY
Sbjct: 61  D-LPDEVIHLMFSANRWEHL-NRMRKQLEAGTTLVVDRYSYSGVAY 104


>gi|220929912|ref|YP_002506821.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10]
 gi|220000240|gb|ACL76841.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10]
          Length = 230

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGV 59
           G+ I FEGI G GK+  +  L+++L  K Y   V          +  + +    LL+ GV
Sbjct: 12  GMLIVFEGISGCGKSESVEALRKYLSDKGYKTSVLEWNSNKIIRKITKAIDSIKLLTPGV 71

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99
             F      + +    +D+   V+ P L +  IL+ DR++
Sbjct: 72  YSF------LQWIGFLIDYFFKVV-PLLKKNYILIADRYI 104


>gi|319442834|ref|ZP_07991990.1| thymidylate kinase [Corynebacterium variabile DSM 44702]
          Length = 236

 Score = 40.8 bits (94), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 26/178 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63
           + I+FEGI+GAGK T ++ L+  L  +  ++ V R     P  E + H  L+      G 
Sbjct: 1   MIIAFEGIDGAGKNTVVTALEAELIAR--EIPVARL--AFPRYETSVHAQLASAALHGGM 56

Query: 64  ------AEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGER------ 109
                 A   A +FA   LD  E          +G ++L DR++ S+ AY   R      
Sbjct: 57  GDLVDSAYGMATLFA---LDRAEVAAELTGFDEDGYVVLLDRWVASNAAYSAARLSQDAS 113

Query: 110 ---DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
              +SS+ + ++D L+   +   +PD  +++++P  +   RV  R        +D +E
Sbjct: 114 AGGESSEVVAWVDDLEFTQLGIPVPDLQVLVNVPDSVTAGRVAARAEEDAGRGVDAYE 171


>gi|255323824|ref|ZP_05364950.1| dTMP kinase [Corynebacterium tuberculostearicum SK141]
 gi|255299004|gb|EET78295.1| dTMP kinase [Corynebacterium tuberculostearicum SK141]
          Length = 204

 Score = 40.8 bits (94), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 3/162 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T +S LK    R    +   R      A  A + +    G     A
Sbjct: 1   MLISIEGIDGAGKNTLVSALKESFDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122
            A A +FA  R   V++ ++ A     ++L DR++ S+ AY   R  D +   ++  L+ 
Sbjct: 61  YAMATLFALDRY-GVKDQLQRAKESDTVVLLDRYVASNAAYSAARLEDDAVMEWVHDLEF 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
            ++     D  + LD  V++  +R Q R     S   D +ER
Sbjct: 120 GTLCLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER 161


>gi|218132360|ref|ZP_03461164.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992698|gb|EEC58700.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC
           43243]
          Length = 235

 Score = 40.4 bits (93), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 72/184 (39%), Gaps = 44/184 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKR--------------------------------FLQRKN 32
           + ISF G +GAGKTTHI LLK+                                + Q + 
Sbjct: 1   MIISFTGCDGAGKTTHIDLLKKRICNSCKLSGINLLDITNGVLVYENIRDIDLIYKQLEK 60

Query: 33  YDVHVTREPGGTP-AAEAARHVLLSCGVDEFGAEAEAI--VFAAARLDH---VENVIRPA 86
           YDV VTR    +    E  R + L  G+D     +E I  V    + D     E+VI   
Sbjct: 61  YDVIVTRFYMKSKLCNEEQRKIRL--GLDSVFNNSERIRKVLDCVKTDSDIWREHVISKL 118

Query: 87  LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
               KI++ DR+     AY+    S  +L L  +++     + PD +  L    D   +R
Sbjct: 119 HERNKIIIVDRYYYDEVAYR----SMYNLGLYEVEQYFCDAIKPDLSYALLASFDEIRQR 174

Query: 147 VQNR 150
             NR
Sbjct: 175 NNNR 178


>gi|317061547|ref|ZP_07926032.1| thymidylate kinase [Fusobacterium sp. D12]
 gi|313687223|gb|EFS24058.1| thymidylate kinase [Fusobacterium sp. D12]
          Length = 226

 Score = 40.4 bits (93), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 18/153 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           N G  I  EG + +GK T   LL ++FL +      ++     +PA E  +  L      
Sbjct: 4   NMGKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYL----AG 59

Query: 61  EFGAEAEAI----VFAAARLDHVENVIRPA----LMEGKILLCDRFLDSSYAYQ-----G 107
           EFG +AE +    V A   +D   +  +        E  + + DR++ S+  +Q     G
Sbjct: 60  EFGLDAEKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQG 119

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPV 140
           E       +L++L+    Q   PD  I LD+P 
Sbjct: 120 EEKEHYLSWLETLEYEQFQIPRPDFVIFLDMPT 152


>gi|73852905|ref|YP_294189.1| putative thymidylate kinase [Emiliania huxleyi virus 86]
 gi|72415621|emb|CAI65858.1| putative thymidylate kinase [Emiliania huxleyi virus 86]
          Length = 327

 Score = 40.4 bits (93), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVD-- 60
           G     EG +G GK T  +LL+R L++++Y V     P          R +L     D  
Sbjct: 106 GRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGDIK 165

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  A ++A  R   V++++   +  G  ++ DR++ S+ A+QG  +     ++   
Sbjct: 166 NLDPFLFASLYAQNRWS-VKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVAKQ 224

Query: 121 QEISVQEVM----PDCTIILDLPVDIG 143
            E+   E++     +  I LDLP ++ 
Sbjct: 225 TELFENEILGLPHANHIIYLDLPPEVA 251


>gi|310659451|ref|YP_003937172.1| thymidylate kinase [Clostridium sticklandii DSM 519]
 gi|308826229|emb|CBH22267.1| putative thymidylate kinase [Clostridium sticklandii]
          Length = 231

 Score = 40.4 bits (93), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 16/159 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF+   G + +GK T   LL   L+   Y+V     P     + A   + L     +FG+
Sbjct: 4   LFVVESGSDASGKATQTELLYNKLKMDGYNVRKIEFPNYKSESSALVKMYLRG---DFGS 60

Query: 65  EAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114
           + E       +  +A  R    +         G I++ DR+  S+  +Q  +    + + 
Sbjct: 61  KPEDVNPYITSTFYAVDRYASFKTSWEEFYNNGGIIIADRYTTSNMVHQAAKYDDYNDKD 120

Query: 115 LFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
            FL  L E          P     L++PV+   K ++NR
Sbjct: 121 KFLQWLDEYEFDFYGLPRPTKVFFLNMPVEFSFKLMKNR 159


>gi|300790592|ref|YP_003770883.1| dTMP kinase [Amycolatopsis mediterranei U32]
 gi|299800106|gb|ADJ50481.1| dTMP kinase [Amycolatopsis mediterranei U32]
          Length = 703

 Score = 40.4 bits (93), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 48/93 (51%)

Query: 45  PAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           PA +  R   L  G    GA A+A+  AA R D VE  ++PAL  G +++ +RF+DS  A
Sbjct: 517 PALDDQRLAALVSGASLTGARAQALAAAAVRADIVERHVQPALDAGSVVVMERFVDSPLA 576

Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILD 137
           +           L+ L + +   + PD TI+LD
Sbjct: 577 HLSAVAGLDSDELEGLADWATGRLRPDMTILLD 609


>gi|238928063|ref|ZP_04659823.1| thymidylate kinase [Selenomonas flueggei ATCC 43531]
 gi|238884023|gb|EEQ47661.1| thymidylate kinase [Selenomonas flueggei ATCC 43531]
          Length = 231

 Score = 40.4 bits (93), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 10/148 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----S 56
           M  G     E  +G+GK T   LL + L R+ + V     P     A     + L     
Sbjct: 1   MARGKLFIIEAGDGSGKETQTRLLAQRLIREGHRVRAVAFPDYEADASMPVRMYLRGDFG 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQH 114
              DE    A +  FA  R        R     G I+L DR+  S+  +Q    RD+++ 
Sbjct: 61  MQADEVNPYAASTFFAVDRYASYRMKWRQDYEAGTIILADRYTTSNMVHQAVKIRDAAER 120

Query: 115 -LFLDSLQEISVQEV---MPDCTIILDL 138
             FLD L +    ++   +PD    LD+
Sbjct: 121 DAFLDWLDDFEFNKLGLPVPDAVFFLDM 148


>gi|325108330|ref|YP_004269398.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305]
 gi|324968598|gb|ADY59376.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305]
          Length = 228

 Score = 40.0 bits (92), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 10/154 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCG-VDE 61
           FI+ EGI+G+GK T  + L   L  +      +   R        +  R +    G +D 
Sbjct: 4   FIAIEGIDGSGKGTQTAALCDHLNAQGLRCDTITFPRYAETLLGKQIGRFLDGQFGALDH 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHL-F 116
                 ++++A  R +   ++I   L    +L+ DR++ S+ A+QG R    + ++ L F
Sbjct: 64  LHPVPISLMYATERYES-RSLIEEKLNNCDVLIADRYVGSNLAHQGARLEGDERAEFLKF 122

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           ++ L+        P+  ++LDLP D    RV  +
Sbjct: 123 IEKLEYELFAVPRPELVLLLDLPADASAARVAKK 156


>gi|282174114|ref|YP_003358216.1| ORF77 [Anguillid herpesvirus 1]
 gi|281308957|gb|ADA57840.1| ORF77 [Anguillid herpesvirus 1]
          Length = 214

 Score = 40.0 bits (92), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 7/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG +  GK+T  + L          VH  +  G T      R    +  V    
Sbjct: 16  GRLIAVEGCDRTGKSTLCARLAETWPESITAVHFPKMEG-TFTGSVLRTAFKTPFVRS-N 73

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R + + + I   L +GKI++CDR+  S  AY   +   Q       +  
Sbjct: 74  PRIMHLLFSANRWE-LMDFIGAELAKGKIVVCDRYFGSGLAYSMVKGLDQEW----CEGP 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
             + + PD TI LD P+   +KR
Sbjct: 129 DRRLIQPDATIYLDAPLSALMKR 151


>gi|109101748|ref|XP_001094132.1| PREDICTED: thymidylate kinase-like isoform 2 [Macaca mulatta]
          Length = 212

 Score = 40.0 bits (92), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 27/207 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G  I  EG++ AGK+T    L   L    +   + R P    + E  +  LLS  ++   
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFP--ERSTEIGK--LLSSYLEKKS 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  
Sbjct: 62  DVEDHAVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGVAFTG---AKENFSLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++  V    PD  + L L +    KR      RY  R                E+  Q F
Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKRGAYGHERYENR-------------AFQERALQCF 164

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
             + R+      +VD++ S ++V  +I
Sbjct: 165 HQLMRDTTLNWKMVDASKSIEAVHEDI 191


>gi|111223133|ref|YP_713927.1| putative thymidylate kinase [Frankia alni ACN14a]
 gi|111150665|emb|CAJ62366.1| putative Thymidylate kinase (dTMP kinase) [Frankia alni ACN14a]
          Length = 263

 Score = 40.0 bits (92), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 3/147 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAE 65
           I+  G++G GKTT    L R L             GG P  +  AR +    G D  G  
Sbjct: 10  IALLGVDGVGKTTQARRLARTLTAAGQPASYFENGGGRPLLDPLARRLGRRDGPDLLGRR 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               V A  R   +   +  + + G+I + DR+    YA  G R         + +  + 
Sbjct: 70  VHVAVEATYRGLAITRALALSRLTGRIAVMDRYTYCQYAVMGLRGDGTGDDDGARRVRAA 129

Query: 126 QEV--MPDCTIILDLPVDIGLKRVQNR 150
                +PD  ++   P  +  +RV+ R
Sbjct: 130 YRRFPLPDLVVLFTAPATLAQQRVERR 156


>gi|159467731|ref|XP_001692045.1| hypothetical protein CHLREDRAFT_128562 [Chlamydomonas reinhardtii]
 gi|158278772|gb|EDP04535.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 214

 Score = 40.0 bits (92), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG +  GKTT  S +   L+ +  D  + R P  + +  AA +  LS    +  
Sbjct: 9   GALIVFEGGDRCGKTTQCSKMVERLKSQGVDAVMWRFPDRSTSIGAAINAYLS-NQSQLD 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F A RL+  + ++R  L  G  L+ DR+  S  AY   +    HL +D  + +
Sbjct: 68  DAVIHMLFVANRLEKRDEMLR-LLAGGTTLVLDRYSYSGVAYTAAK-GVPHLSIDYCKSL 125

Query: 124 SVQEVMPDCTIILDL 138
            V  V+P   +++ +
Sbjct: 126 EV--VLPAADLVVHM 138


>gi|15078963|ref|NP_149714.1| 251L [Invertebrate iridescent virus 6]
 gi|82012170|sp|Q91FS1|KTHY_IIV6 RecName: Full=Putative thymidylate kinase 251L; AltName: Full=dTMP
           kinase
 gi|15042332|gb|AAK82112.1|AF303741_251 251L [Invertebrate iridescent virus 6]
          Length = 213

 Score = 40.0 bits (92), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL I FEG +  GK+T   LL   L++KN +V +   P  T          L  G     
Sbjct: 14  GLLIVFEGCDKTGKSTQCKLLFEELKQKNIEVRMINFPNRTTQTGKLIDQYLK-GKIYLS 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
            E   I+F+  R + ++  I+  ++ G  ++ DR+  S  A+
Sbjct: 73  DEDIHILFSKNRWEIID-TIKTNILNGITVIIDRYSYSGIAF 113


>gi|219669039|ref|YP_002459474.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2]
 gi|219539299|gb|ACL21038.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2]
          Length = 225

 Score = 40.0 bits (92), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 24/184 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T    L R L  +   V     P  +  + +   + L     EFG
Sbjct: 2   GKLIIIEGGDGSGKATQTRKLWRRLADEGLQVKKVEFPNYSSPSSSLVTMYLGG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113
            +   +        +A  R    + +       G I+L DR+  S+  +Q  +    +  
Sbjct: 59  TDPNGVNPYTASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGW 118

Query: 114 HLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L++   + +    PD  I L++P D+ ++ +  R         D        IH
Sbjct: 119 ASYLDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIQFIAGRADKSSVTSQD--------IH 170

Query: 171 EKRR 174
           EK +
Sbjct: 171 EKNK 174


>gi|167750887|ref|ZP_02423014.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702]
 gi|167656066|gb|EDS00196.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702]
 gi|291557390|emb|CBL34507.1| thymidylate kinase [Eubacterium siraeum V10Sc8a]
          Length = 222

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 24/168 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLK-------RFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           G     EG++G GK+T + +LK       RF+   NY+         + + E  +  L  
Sbjct: 9   GKLFVIEGLDGCGKSTQLEMLKASADSNIRFISFPNYN---------SASGEIIKDYLSG 59

Query: 57  CGVDE---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DS 111
              +E    GA      +A  R    +         GK ++  R+  S+  YQ  +   S
Sbjct: 60  KFCEENGRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKS 119

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRES 156
               +L+ L++    +     P+  I LD+PV++  K +  RY   E+
Sbjct: 120 RWDEYLEWLEDYEYDKFAIPRPERIIFLDMPVEVSQKLLSARYGGDEA 167


>gi|47212537|emb|CAF90553.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 166

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 2/95 (2%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
          G  I  EG++ AGKTT    L + LQ +     + R P  T A        L     E  
Sbjct: 6  GALIVLEGVDKAGKTTQCKKLVQALQERGQPAEMMRFPDRTTAIGQLISAYLE-NKSELT 64

Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
           +   ++FAA R + V  +I+  L +G  L+ DR+
Sbjct: 65 DQTVHLLFAANRWEMVP-LIKKKLQQGTTLVVDRY 98


>gi|290558930|gb|EFD92317.1| thymidylate kinase [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 202

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 25/176 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGV 59
           G  I  EGI+GAGK T   LLK  L+     V     P  +    A     L       V
Sbjct: 3   GKIIVIEGIDGAGKATQSKLLKEKLESNGITVSSYSYPDYSSVYGARIKSFLYKEIKIKV 62

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQH 114
           DE        +F    +D V   E +I   L  G  ++ DRF  S+ AYQ  G  D    
Sbjct: 63  DE--------LFMLYLIDMVKDREKMINE-LKSGNYIIIDRFFFSTIAYQSAGGFDYDNC 113

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +  L ++ V    P+ T  +D+PVD+ + R + +   +    +D FE   V + 
Sbjct: 114 KKIIKLFDMPV----PEITFFIDVPVDVSMSRKEKQ---KGKLDVDKFESNKVFLQ 162


>gi|225711618|gb|ACO11655.1| Thymidylate kinase [Caligus rogercresseyi]
          Length = 216

 Score = 40.0 bits (92), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 31/154 (20%)

Query: 4   GLFISFEGIEGAGKTTHISLLK-----RFLQRKNYDVHVTRE------PGGTPAAEAARH 52
           G FI  EG + +GKTT    L       F +  + D  +T         GGTP +    H
Sbjct: 9   GAFIVLEGCDRSGKTTIAKRLSDSPGFEFFRFPDRDSPLTGSLINSFLTGGTPMSSQLIH 68

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           +L                F+A R + V +++   L  GK ++CDR+  S  AY     S 
Sbjct: 69  LL----------------FSANRWEKVPSMLS-VLSAGKNIICDRYAYSGIAYS---SSK 108

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
             +  D           PD  I LD+  +  LKR
Sbjct: 109 PGMDFDWCAGPDNGLPTPDLVIFLDVSPEQALKR 142


>gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus]
          Length = 443

 Score = 39.7 bits (91), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64
           GI+G+GKTT ++ L R+ Q++ Y V V    T  PG   A    R VL    ++ FG   
Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG---AYHQLRQVLDRYHIEVFGNPQ 163

Query: 65  EAEAIVFAAARLDHVEN 81
           E +AI  A   +D+ ++
Sbjct: 164 EKDAIKLAKEGVDYFKS 180


>gi|163867844|ref|YP_001609048.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
 gi|161017495|emb|CAK01053.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
          Length = 219

 Score = 39.7 bits (91), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 7/149 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F+   G +G+GKTT +  + R+  ++ + +   +        +  R  L S      
Sbjct: 18  AGSFVVLCGFDGSGKTTQVQEISRYWAQEKHIIQTFQPSHWYRNNQEVRDYLESG--KSI 75

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                A++ A  R  H   +I P+L   +  ++ DR++ SS AY   R     L L+S+ 
Sbjct: 76  DPLLLALLAATDRRKHTLEIIEPSLTSSQNFIISDRYVYSSLAYFYARG----LSLESVI 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +++     P  T  L LP    ++R+Q R
Sbjct: 132 KLNQFIPRPCITFYLHLPPTAIIERLQKR 160


>gi|322795260|gb|EFZ18065.1| hypothetical protein SINV_01400 [Solenopsis invicta]
          Length = 208

 Score = 39.7 bits (91), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 11/139 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI  EG + AGK+T + +L   L     D+ +  +  G P  +     +L+  + 
Sbjct: 2   LKRGAFIVLEGCDRAGKSTQVKMLINALN----DLQIPAKARGFPNRKTPVGTILNSFLS 57

Query: 61  E---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +      E   ++F+A R +  E+ +   L+ G  L+ DR+  S   Y           L
Sbjct: 58  KEINVPPETAHLLFSANRWECKED-MEKTLLSGVSLVMDRYAASGAVYTAANTGRS---L 113

Query: 118 DSLQEISVQEVMPDCTIIL 136
           +  Q+  +  + PDC + L
Sbjct: 114 NWCQQPDLGLLKPDCVMFL 132


>gi|226310244|ref|YP_002770138.1| hypothetical protein BBR47_06570 [Brevibacillus brevis NBRC 100599]
 gi|226093192|dbj|BAH41634.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 191

 Score = 39.7 bits (91), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 35/221 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     ++FEGI+   K    +LL+  L+   Y V     P       A   + L C + 
Sbjct: 1   MRQPTIVAFEGIDANAKEAQAALLEENLRCLGYKVKRVSFPRLDTPIGAVIGMWLRCEI- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   +A   +F A  LD+   + R +      ++ D +  S+Y Y   +D+     L   
Sbjct: 60  ELDEKAVGKLFEADFLDYQREMARLSKENVDFIIMDHYELSNYYYFYIKDTP----LSWY 115

Query: 121 QEISVQEVMPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +S     PD T  L   VD     L +VQ  Y                + H  RR + 
Sbjct: 116 ATMSDLTKRPDATFFLRTEVDANHAMLLKVQEAYL--------------SLAHASRRSV- 160

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL-VQKRVS 217
                      H +D+A   + +  NIL +V +L ++KRV+
Sbjct: 161 -----------HTLDTAIGVERMQKNILQVVHQLHLKKRVT 190


>gi|260494279|ref|ZP_05814410.1| thymidylate kinase [Fusobacterium sp. 3_1_33]
 gi|260198425|gb|EEW95941.1| thymidylate kinase [Fusobacterium sp. 3_1_33]
          Length = 223

 Score = 39.7 bits (91), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 27/183 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  I  EG + +GK T   LL   + +K YD  + ++     +PA E  +  L       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56

Query: 62  FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111
           FG +A  +       ++A  R    +       +   +++ DR++ S+  +Q  +   + 
Sbjct: 57  FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIGDYVIITDRYVTSNMVHQASKIKDNE 116

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +L  L ++   +     PD  I L +P+D   + ++NR        +D  E+KD  
Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENR-----KNKIDGSEKKD-- 169

Query: 169 IHE 171
           IHE
Sbjct: 170 IHE 172


>gi|89894606|ref|YP_518093.1| hypothetical protein DSY1860 [Desulfitobacterium hafniense Y51]
 gi|89334054|dbj|BAE83649.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 225

 Score = 39.7 bits (91), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 24/184 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T    L + L  +   V     P  +  + +   + L     EFG
Sbjct: 2   GKLIIIEGGDGSGKATQTRKLWQRLADEGLQVKKVEFPNYSSPSSSLVTMYLGG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113
            +  A+        +A  R    + +       G I+L DR+  S+  +Q  +    +  
Sbjct: 59  TDPNAVNPYAASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGW 118

Query: 114 HLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L++   + +    PD  I L++P D+ ++ +  R         D        IH
Sbjct: 119 ASYLDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIRFIAGRADKSSVTSQD--------IH 170

Query: 171 EKRR 174
           EK +
Sbjct: 171 EKNK 174


>gi|82915445|ref|XP_729074.1| thymidylate kinase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485911|gb|EAA20639.1| Thymidylate kinase [Plasmodium yoelii yoelii]
          Length = 146

 Score = 39.7 bits (91), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI FEG++ +GK+T   L   +L+  N  V H+      T   +   + L       F
Sbjct: 15  GNFIVFEGVDRSGKSTQSKLFVEYLKNNNIQVQHLCFPNRETTIGKIITNYLKM--ESTF 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             E   ++F+A R + ++  I+  L+ G  ++CDR   S   Y
Sbjct: 73  SNETIHLLFSANRWEMMDQ-IKNLLINGVWVICDRXXYSGVXY 114


>gi|303231908|ref|ZP_07318617.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513437|gb|EFL55470.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6]
          Length = 228

 Score = 39.7 bits (91), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 25/196 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T    L   LQ + + V     P     A     + LS    +FG
Sbjct: 2   GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLSG---QFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114
            + +++       ++A  R        +    +G I++ DR+  S+  +Q  +  D+ + 
Sbjct: 59  TDVDSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKR 118

Query: 115 L-FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           + FL+ L++    +     PD   +LD+P+D+    +  R         D        IH
Sbjct: 119 VQFLEWLEDFEFVKFGLPRPDAVCLLDVPLDVTESLMSERTGKTGGETGD--------IH 170

Query: 171 EKRRQIFLDIARNQPD 186
           E  R ++L    N  D
Sbjct: 171 EGNR-VYLQAVHNAYD 185


>gi|238019601|ref|ZP_04600027.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748]
 gi|237863799|gb|EEP65089.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748]
          Length = 228

 Score = 39.7 bits (91), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 16/152 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+    EFG
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQ 113
            +   +       ++A  R              G I++ DR+  S+  +Q  +      +
Sbjct: 59  KDVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDLKER 118

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDI 142
             FLD L++    +     PD   +LD+P+++
Sbjct: 119 TAFLDWLEDFEFNKFGLPTPDAVCLLDMPLEV 150


>gi|156544086|ref|XP_001605460.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate
          kinase) [Nasonia vitripennis]
          Length = 209

 Score = 39.7 bits (91), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M  G FI  EG++ AGK+T +S++   L+ +N  V     P  + A     +  L+  + 
Sbjct: 1  MARGAFIVLEGLDRAGKSTQVSMIVEALKERNVPVERRVFPDRSTAIGGIINDYLAKKI- 59

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
          E   EA  ++F+A R +  + ++   L +G  L+ DR
Sbjct: 60 ELAPEAVHLLFSANRWECKDGILE-TLEKGTTLIVDR 95


>gi|154496578|ref|ZP_02035274.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC
           29799]
 gi|150274211|gb|EDN01302.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC
           29799]
          Length = 224

 Score = 39.7 bits (91), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 15/160 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG  I FEG +G+GK+T  + L   L+++  D      P     + A   + L+    EF
Sbjct: 2   SGKLIVFEGTDGSGKSTQFAKLCERLEQEGTDFRRLIFPQYKEPSSALLRMYLN---GEF 58

Query: 63  GAE-------AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113
           G         A +  +A  R    +         G ++L DR+  S+  +Q  +  ++  
Sbjct: 59  GTHPDDVNPYAASTFYAVDRYAAWKKDWGSYYQNGGLVLSDRYTTSNAVHQTCKLPEAEW 118

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
             F+  L +    ++    PD  I LD+P D  ++ ++ R
Sbjct: 119 ENFIRWLFDFECGKLGLPAPDLVIYLDMPTDKAVEMLRAR 158


>gi|322712668|gb|EFZ04241.1| thymidylate kinase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 257

 Score = 39.7 bits (91), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 22/228 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++ +GKTT + LL++    +   V V R P  T          L   V +  
Sbjct: 23  GAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVRVMRFPDRTTPIGQMIDAYLKSDV-QME 81

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE 122
                ++F+A R + V+  I+  L  G  ++ DRF  S   Y   + + S  L      E
Sbjct: 82  DHVIHLLFSANRWEAVDQ-IKTLLAAGTTVISDRFYHSGIVYSAAKLNPSLPLSWARAPE 140

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER----------KDVMIHEK 172
             +    PD  + LDL  +    R      L E A +    R          KD+   E 
Sbjct: 141 RGLPR--PDVVLFLDLDEETARARGGWGGELYEKAEMQKRVRELFWGLSMGGKDIQGQEM 198

Query: 173 RRQI-FLDIA--RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              +  L+ A  R + +   +VD+  S + VA  I    W  ++ RV+
Sbjct: 199 LAGLGGLEGAQWRQEEEDLVVVDAGGSVEEVADRI----WGTLEGRVA 242


>gi|291531126|emb|CBK96711.1| thymidylate kinase [Eubacterium siraeum 70/3]
          Length = 222

 Score = 39.7 bits (91), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 24/168 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLK-------RFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           G     EG++G GK+T + +LK       RF+   NY+         + + E  +  L  
Sbjct: 9   GKLFVIEGLDGCGKSTQLEMLKASADSNIRFISFPNYN---------SASGEIIKDYLSG 59

Query: 57  CGVDE---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DS 111
              +E    GA      +A  R    +         GK ++  R+  S+  YQ  +   S
Sbjct: 60  KFCEENGRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKS 119

Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRES 156
               +L+ L++    +     P+  + LD+PV++  K +  RY   E+
Sbjct: 120 QWDEYLEWLEDYEYDKFAIPRPERIVFLDMPVEVSQKLLSARYGGDEA 167


>gi|238503185|ref|XP_002382826.1| thymidylate kinase [Aspergillus flavus NRRL3357]
 gi|220691636|gb|EED47984.1| thymidylate kinase [Aspergillus flavus NRRL3357]
          Length = 225

 Score = 39.7 bits (91), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 20/205 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK++    L+ +LQ   + V   R P  T A        L  G  +  
Sbjct: 12  GALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLR-GQSQLD 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++F+A R + +  VI   + +G  ++ DR+  S   Y   +     L L    + 
Sbjct: 71  DHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVYSAAKGIPT-LSLGWAWQP 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKR-RQIFLDI 180
            V    PD  + L             R S  E+A    F  ER +    + R R++F  +
Sbjct: 129 EVGLPRPDMCLFL-------------RISPTEAAKRGGFGVERYENETMQSRVRELFQTL 175

Query: 181 ARNQPDR-CHIVDSAHSFQSVATNI 204
              QP+   H+V++  SF+ V+  I
Sbjct: 176 FDLQPNGDIHVVNAGRSFKEVSEEI 200


>gi|296425149|ref|XP_002842105.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638364|emb|CAZ86296.1| unnamed protein product [Tuber melanosporum]
          Length = 214

 Score = 39.3 bits (90), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 80/197 (40%), Gaps = 16/197 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG++ AGK+T   LL   L  +N    + + P  T       +  LS       
Sbjct: 10  GALIAIEGLDRAGKSTQCQLLMDRLAERNVPARLQKFPDRTTPIGKMINAYLSTST-TLE 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R +   ++++  L +G  ++ DR++ S   +     +++ L LD  +  
Sbjct: 69  DHTIHLLFSANRWELSAHILK-LLNDGVTIVLDRYVYSGIVFS----AAKGLSLDYCRAP 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V     D  + LDL  ++  +R        E             +  + R +F ++   
Sbjct: 124 DVGLPRADVVLFLDLDAEVARRRGGFGGERYEVEA----------VQRRVRDLFKEVGEK 173

Query: 184 QPDRCHIVDSAHSFQSV 200
           +  R  +VD+  S + V
Sbjct: 174 EEGRWRVVDAGRSVEEV 190


>gi|50548641|ref|XP_501790.1| YALI0C13354p [Yarrowia lipolytica]
 gi|49647657|emb|CAG82100.1| YALI0C13354p [Yarrowia lipolytica]
          Length = 204

 Score = 39.3 bits (90), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 23/212 (10%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
           G FI+ EG++ +GK+T    L+    +      H+ + P   TP  +     L S GV  
Sbjct: 3   GRFIAIEGLDRSGKSTQCDRLVAHLTETTGNKTHLFKFPDRSTPMGQIINQYLTS-GV-A 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A  ++F+A R + +E+ I+  L +G+ ++ DR+  S   Y   +   +    +   
Sbjct: 61  LSDQAIHLLFSANRWERIED-IKALLEKGENVVLDRYYISGIVYTQAKGLERQWCTNPDL 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + V    PD T+ L +  ++  +R    Y       + + +R   + HE  +       
Sbjct: 120 GLPV----PDITLFLTVSPEVASQR--GAYGEERYEKIAFQKRVAALFHEVAQ------- 166

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           RN    C  VD++ + + VA N +N   E VQ
Sbjct: 167 RN----CITVDASGTEEEVA-NAINQCVETVQ 193


>gi|145505513|ref|XP_001438723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405895|emb|CAK71326.1| unnamed protein product [Paramecium tetraurelia]
          Length = 216

 Score = 39.3 bits (90), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 11/141 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            N G+FI+ EG++ +GK+T   LL + L  K           G   ++  R      G  
Sbjct: 12  FNRGVFIALEGLDKSGKSTQAKLLSQKLNAKKVSFPDRTTQLGLIISDYLR------GNK 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E   ++F+A R +   ++++  L +G  ++ DR+  S  A+     +++ L ++  
Sbjct: 66  NMSDEVIHLLFSANRWEQHTSILK-QLQDGTNIVSDRYAYSGVAF----SAAKGLPIEWC 120

Query: 121 QEISVQEVMPDCTIILDLPVD 141
           +      + PD T  L  P++
Sbjct: 121 KAPDAGLIQPDMTFYLTAPIE 141


>gi|300701613|ref|XP_002994999.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
 gi|239603498|gb|EEQ81328.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
          Length = 199

 Score = 39.3 bits (90), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 17/147 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR---EPGGTPAAEAARHVLLSCGVDE 61
           +F+ FEG++ +GK+T    + + L  K  D+H T+       +   E     LL  G   
Sbjct: 1   MFVVFEGLDKSGKSTTCDSVYKKL--KELDIHTTQMHFPDRSSITGEILNKYLL--GKVN 56

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EA  ++F+A R    +N I      G ILLCDR+  S   +   +       +D   
Sbjct: 57  LTNEATHLLFSADRYQK-KNFIEKTSRSG-ILLCDRYSWSGICFSHAKG------IDLGW 108

Query: 122 EISVQEVM--PDCTIILDLPVDIGLKR 146
            +  + ++  PD T  L+  V++ +KR
Sbjct: 109 AVETERLLPKPDITFFLEADVNVLMKR 135


>gi|94971971|ref|YP_594011.1| thymidylate kinase-like [Deinococcus geothermalis DSM 11300]
 gi|94554022|gb|ABF43937.1| thymidylate kinase [Deinococcus geothermalis DSM 11300]
          Length = 436

 Score = 39.3 bits (90), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 42/229 (18%)

Query: 3   SGLFISFEGIEGAGKTTHIS-----LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLS 56
           +GL ++F G +GAGK++ I+     +   F + K Y  H+    G G P+ EA       
Sbjct: 230 TGLCVAFLGPDGAGKSSVIAEVENKVAPAFRRLKRY--HLRPSFGRGHPSGEAVSDPHGK 287

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS------SYAYQGERD 110
                  + A+ +++ A         +R  L+   +++ DR+          Y Y G   
Sbjct: 288 APRGSGSSLAKLLLWLADYTVGSVPAVRLPLVRSTLVIFDRYYHDLLVDARRYRYGGP-- 345

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                +L  L   +V    PD  I LDLP ++   R                 + +V + 
Sbjct: 346 ----AWLAGLVGRAVPR--PDLFIFLDLPAEVAHAR-----------------KPEVPLE 382

Query: 171 EKR--RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           E R  R+ +  +AR  P+  H+VD+      VA  +  I+   +QKR  
Sbjct: 383 EGRRLRERYRQLARQLPN-AHVVDAERPLDEVAREVETIILHHLQKRTG 430


>gi|15827333|ref|NP_301596.1| thymidylate kinase [Mycobacterium leprae TN]
 gi|221229811|ref|YP_002503227.1| thymidylate kinase [Mycobacterium leprae Br4923]
 gi|13092882|emb|CAC30281.1| putative thymidylate kinase [Mycobacterium leprae]
 gi|219932918|emb|CAR70866.1| putative thymidylate kinase [Mycobacterium leprae Br4923]
          Length = 210

 Score = 39.3 bits (90), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 23/204 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEA--ARHVLLS 56
           + I+ EG++GAGK T    L++  +     V     P          AAEA   +H  L+
Sbjct: 1   MLIAIEGVDGAGKRTLSEELRQAFEATGKSVATLAFPRYRQSVAADIAAEALHGQHGDLA 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQ 113
             V      A A++FA  R   VE++   AL     I++ DR++ S+ AY   R  +   
Sbjct: 61  SSV-----YAMALLFAFDRAGAVEDI--EALDRNHDIVILDRYVASNAAYSAARLHEDCS 113

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              +  +Q I  Q +    PD  ++L + V++  KR + R         D +ER D  + 
Sbjct: 114 GRAVAWVQRIEYQRLRLPSPDWQVLLAVSVELAGKRSRYRARTDPDRLRDSYERDD-GLQ 172

Query: 171 EKRRQIFLDI-ARNQPDRCHIVDS 193
           ++   ++  + A +   R  +VD+
Sbjct: 173 QRTGAVYAGLAAADWGGRWLVVDA 196


>gi|187934501|ref|YP_001884434.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B]
 gi|187722654|gb|ACD23875.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B]
          Length = 225

 Score = 39.3 bits (90), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 18/164 (10%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           M  G  I  E G + +GK T    L   L  + Y++     P   +PA    +  L    
Sbjct: 1   MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSG-- 58

Query: 59  VDEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-- 109
             EFG + E +        FA  R        +     G I++ DR+  S+  +Q  +  
Sbjct: 59  --EFGNKPEDVNAYVASTFFAIDRFASYNKEWKDFYDNGGIIISDRYTTSNMVHQAVKMD 116

Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           +  +  +LD L  +        +PDC + LD+  +I  K +++R
Sbjct: 117 EEEKDKYLDWLYNLEFNLYKLPIPDCVMFLDVLPEISQKLMKDR 160


>gi|188587973|ref|YP_001919632.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498254|gb|ACD51390.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43]
          Length = 225

 Score = 39.3 bits (90), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 18/164 (10%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           M  G  I  E G + +GK T    L   L  + Y++     P   +PA    +  L    
Sbjct: 1   MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSG-- 58

Query: 59  VDEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-- 109
             EFG + E +        FA  R        +     G I++ DR+  S+  +Q  +  
Sbjct: 59  --EFGNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMD 116

Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           +  +  +LD L  +        +PDC + LD+  +I  K +++R
Sbjct: 117 EEEKDKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDR 160


>gi|326469002|gb|EGD93011.1| thymidylate kinase [Trichophyton tonsurans CBS 112818]
          Length = 182

 Score = 39.3 bits (90), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 3/143 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ AGK+T  + L +FL  + ++    R P  T A     +  L  G  +  
Sbjct: 13  GALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYLR-GEIQLD 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ + L LD     
Sbjct: 72  DHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKE-LQLDWAWRP 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            V    PD    L++  ++   R
Sbjct: 130 EVGLPRPDIWFFLNISTEVAAAR 152


>gi|134102882|ref|YP_001108543.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915505|emb|CAM05618.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338]
          Length = 209

 Score = 39.3 bits (90), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 25/199 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKN----------YDVHVTREPGGTPAAEAARHVLLSCG 58
            EG++GAGK T    L   L R+           YD  V  E      AEA R      G
Sbjct: 2   IEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAE----LVAEALRGGHGDLG 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116
               G    A+++A  R     + +R  L    ++L DR++ S+ AY   R    +Q  F
Sbjct: 58  DSVHGM---AVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDF 113

Query: 117 LDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +   +E+ ++      PD  ++L +P ++   R  +R         D FE  D  + E+ 
Sbjct: 114 VAWTEELEIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFE-SDASLQERC 172

Query: 174 RQIFLDIA-RNQPDRCHIV 191
            +++  +A RN      +V
Sbjct: 173 GEVYAQLAERNWWSPWRVV 191


>gi|149174610|ref|ZP_01853236.1| Thymidylate kinase [Planctomyces maris DSM 8797]
 gi|148846720|gb|EDL61057.1| Thymidylate kinase [Planctomyces maris DSM 8797]
          Length = 222

 Score = 39.3 bits (90), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 20/225 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS--CGV 59
            + I+ EGI+G+GK T  + L    Q +     +   P    T   ++    L      +
Sbjct: 2   AVIIAIEGIDGSGKGTQAARLHARCQAEGIKTSLIGFPRYDQTLFGKSIGDFLNGRFGEL 61

Query: 60  DEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS--QH 114
           DE      ++++A  R +   H+ N I  +     +++ DR++ S+ A+QG + S   + 
Sbjct: 62  DEVNPFLASLLYAGDRFESRSHILNTIETS----DVVIFDRYIPSNVAHQGAKLSGAERS 117

Query: 115 LFLDSLQEISVQ-EVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            F++ +++I      MP  +  I+LDLP D   K +  + +   +  +   +  D     
Sbjct: 118 EFIEWIEQIEYAIYKMPRLNLAILLDLPADYAQKLIAEKQARSYTEKVADLQEADQTYLA 177

Query: 172 KRRQIFLDIARN----QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             R+++L +A      Q  +C   ++  S + ++  I + V +L+
Sbjct: 178 NVREVYLQLAEENQHWQKIQCLQKETLRSIEEISDEIWSYVSKLI 222


>gi|171676382|ref|XP_001903144.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936257|emb|CAP60916.1| unnamed protein product [Podospora anserina S mat+]
          Length = 274

 Score = 39.3 bits (90), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 5/136 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ +GKTT + LL++        V V R P   TP  +     L S      
Sbjct: 14  GALIVLEGLDRSGKTTQVKLLEQRFVELGKSVKVMRFPDRTTPIGQMINSYLTSQ--TTM 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   ++I   L  G  ++CDR+  S   Y   + +   L L   + 
Sbjct: 72  SDHVIHLLFSANRWE-AASLITSLLSHGTTVICDRYYYSGIVYSAAKHNP-FLPLSWARS 129

Query: 123 ISVQEVMPDCTIILDL 138
             V    PD  + LDL
Sbjct: 130 PEVGLPRPDLVLFLDL 145


>gi|157956089|gb|ABW06432.1| thymidylate kinase [Wheat blue dwarf phytoplasma]
          Length = 209

 Score = 39.3 bits (90), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 38/176 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG++G+GKT+ I  L+                   P  +    +    G    G E 
Sbjct: 5   IVFEGLDGSGKTSLIQYLQ-------------------PQLKTPHQLYQGLGSSSIGKEI 45

Query: 67  EAIVFAAARLDHVENV---------IRPALM-EGKILLCDRFLDSSYAYQ---GERDSSQ 113
             +     ++D++            I+  L  + ++++ DR+L S++AYQ     ++  Q
Sbjct: 46  RDLFLNFQQVDYLTRFYLSLANMAQIQAELFKKNQLIILDRWLPSNFAYQLFPFSKEKKQ 105

Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163
              L  + +++ + ++  PD  I LD+   IG  R + + +    L E   L YF+
Sbjct: 106 LFPLKKIFKLNHETILIKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERESLTYFQ 161


>gi|326202523|ref|ZP_08192391.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
 gi|325987107|gb|EGD47935.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
          Length = 230

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 17/114 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58
           +G+ I FEGI G GK+  + +L+++L    Y   V             + +    LL+ G
Sbjct: 11  NGMLIVFEGISGCGKSESVRVLRKYLTDNGYKTSVLEWNSNRVIRNIIKRIDSKKLLTPG 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDS 111
           +  F        + +  +D++  V+ P L +  +L+ DR     Y Y G  RDS
Sbjct: 71  IYSF------FQWVSFLIDYLFKVL-PLLKKNYVLIADR-----YIYTGLTRDS 112


>gi|251779252|ref|ZP_04822172.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243083567|gb|EES49457.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 225

 Score = 39.3 bits (90), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 18/164 (10%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           M  G  I  E G + +GK T    L   L  + Y++     P   +PA    +  L    
Sbjct: 1   MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSG-- 58

Query: 59  VDEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-- 109
             EFG + E +        FA  R        +     G I++ DR+  S+  +Q  +  
Sbjct: 59  --EFGNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMD 116

Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150
           +  +  +LD L  +        +PDC + LD+  +I  K +++R
Sbjct: 117 EEEKDKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDR 160


>gi|145348882|ref|XP_001418872.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579102|gb|ABO97165.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 218

 Score = 39.3 bits (90), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 16/189 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G F+ FEG +  GK+T    L   L+ +  +  + R P   T   +     L S    E 
Sbjct: 11  GAFVLFEGADRCGKSTQAMRLVHTLEARGVEAELWRYPDRATAMGKMIDQYLRSKSEMED 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  A  ++FAA R +  + ++   L  G  L+CDR+  S  A+   +     L L+  + 
Sbjct: 71  G--AIHLLFAANRWEK-KALMERKLASGVTLVCDRYSYSGCAFTAAK-GVDGLDLEWCRA 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             V    PD  + L+L ++   KR    + RY   E       +R      E  R+ + D
Sbjct: 127 PEVGLPRPDALMYLELSLEDAAKRGGFGEERYETTE------MQRAVKASFEAMREDWWD 180

Query: 180 I--ARNQPD 186
           +  A  +PD
Sbjct: 181 VIDANREPD 189


>gi|33563101|dbj|BAA31455.1| Thimidylate Kinase [Phytoplasma sp.]
          Length = 209

 Score = 39.3 bits (90), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 38/177 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT+ I  L+                   P  +    +    G    G E
Sbjct: 4   LIVFEGLDGSGKTSLIHTLQ-------------------PQLKTPHQLYQGLGSSSIGKE 44

Query: 66  AEAIVFAAARLDHVENV---------IRPALME-GKILLCDRFLDSSYAYQ---GERDSS 112
              +     ++D++            I+  L +  ++++ DR+L S+YAYQ     ++  
Sbjct: 45  IRDLFLNFQQVDYLTRFYLSLANMAQIQAELFKNNQLIILDRWLPSAYAYQLFPFSKEKK 104

Query: 113 QHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163
           Q   L  + +++ + ++  PD  I LD+   IG  R + + +    L E   L YF+
Sbjct: 105 QLPPLKKIFKLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERQSLTYFQ 161


>gi|229365992|gb|ACQ57976.1| Thymidylate kinase [Anoplopoma fimbria]
          Length = 183

 Score = 38.9 bits (89), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 6/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGKTT    L + LQ+      + R P  T          L    D   
Sbjct: 6   GALIVLEGVDKAGKTTQCKKLVQALQQSGRPAEMMRFPDRTTTIGQLISAYLEKKSD-LE 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R + V   +R  L +G  L+ DR+  S  A+     + Q   LD   + 
Sbjct: 65  DHTVHLLFSANRWELVPQ-MRKKLEQGITLVVDRYAFSGVAFT---SAKQGFCLDWCMKP 120

Query: 124 SVQEVMPDCTIILDL-PVDIGLK 145
            V    PD  I L L P +  L+
Sbjct: 121 DVGLPKPDLVIFLQLSPAEATLR 143


>gi|295681475|ref|YP_003610049.1| thymidylate kinase [Burkholderia sp. CCGE1002]
 gi|295441370|gb|ADG20538.1| thymidylate kinase [Burkholderia sp. CCGE1002]
          Length = 250

 Score = 38.9 bits (89), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ I+  G++GAGK++ +  L+        +   T     TP +   +  +    VD   
Sbjct: 18  GVLITLCGVDGAGKSSLMKKLESACTGAGLNCVTTF----TPTSRIRKDAVFRDMVDSHW 73

Query: 64  AEAEAIVFAAA---RLD--------------HVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             ++A + A A   R+D              H+ + + PAL  G ++ CDR++ +S A  
Sbjct: 74  HTSKASLGADASVRRVDMLGILLSIMGDLVQHLTDTVIPALQRGDVVFCDRYVFTSQAEI 133

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           G R       L  L+ ++   + PD    L++      +RV++R
Sbjct: 134 GTRSDPAETAL-VLRSVAGHLLRPDVAFGLNVCGATSHRRVRSR 176


>gi|33563152|dbj|BAC81723.1| pseudo thymidylate kinase [Onion yellows phytoplasma]
          Length = 174

 Score = 38.9 bits (89), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 38/177 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG++G+GKT+ I  L+                   P  +    +    G    G E
Sbjct: 3   LIVFEGLDGSGKTSLIHALQ-------------------PLLKTPHQLYQGLGSSSLGKE 43

Query: 66  AEAIVFAAARLDHVENV---------IRPALME-GKILLCDRFLDSSYAYQ---GERDSS 112
              +     ++D++            I+  L +  ++++ DR+L S+YAYQ     ++  
Sbjct: 44  IRDLFLNFQQVDYLTRFYLSLVNMAQIQAELFKNNQLIILDRWLPSTYAYQLFPFSKEKK 103

Query: 113 QHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163
           Q   L  + +++ + ++  PD  I LD+   IG  R + + +    L E   L YF+
Sbjct: 104 QLSPLKKIFKLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERQSLTYFQ 160


>gi|321456428|gb|EFX67536.1| hypothetical protein DAPPUDRAFT_63855 [Daphnia pulex]
          Length = 195

 Score = 38.9 bits (89), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 7/143 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +  G  I  E  + +GK T    +K  +LQ  N + H+ R P      + A    +    
Sbjct: 2   IKRGALIVLERCDRSGKPTQCQKVKHLWLQESNKEAHLMRFPDEIVCDQPAISSYICYAK 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            + G   E  +F +ARL  +   I+  L +G  ++ DR+  S  A+   +    ++ L  
Sbjct: 62  PKDGTATE--LFTSARLLSIRPDIKKLLQKGTNVIVDRYSYSGIAFSAAKP---NMDLRW 116

Query: 120 LQEISVQEVMPDCTIILDL-PVD 141
            Q+     + PD  I LD+ PV+
Sbjct: 117 CQQSDSGLLKPDLVIFLDIDPVE 139


>gi|296118803|ref|ZP_06837379.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968292|gb|EFG81541.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306]
          Length = 204

 Score = 38.9 bits (89), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 9/165 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS-CGVDE 61
           + I+ EGI+GAGK T +S L++ L   N  V V   P    +  A+ A+  L    G   
Sbjct: 1   MIIAIEGIDGAGKNTLVSQLRKEL---NIPVEVLAFPRYEDSIHAQLAQEALYGRMGDLT 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
             A A A +FA  R    +  +  A     +L+ DR++ S+ AY   R  D +   ++  
Sbjct: 58  SSAYAMATLFALDR-HGAKQQLEEASTSSNLLILDRYVASNAAYSAARLGDDAVMDWVFD 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           L+   +    PD  I L   V I  +R  +R +   S   D +E+
Sbjct: 117 LEFGRLGLPKPDLQIYLATEVGIAAQRASSREAQDASREKDQYEK 161


>gi|257464026|ref|ZP_05628411.1| thymidylate kinase [Fusobacterium sp. D12]
          Length = 222

 Score = 38.9 bits (89), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 18/151 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I  EG + +GK T   LL ++FL +      ++     +PA E  +  L      EF
Sbjct: 2   GKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYL----AGEF 57

Query: 63  GAEAEAI----VFAAARLDHVENVIRPA----LMEGKILLCDRFLDSSYAYQ-----GER 109
           G +AE +    V A   +D   +  +        E  + + DR++ S+  +Q     GE 
Sbjct: 58  GLDAEKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQGEE 117

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPV 140
                 +L++L+    Q   PD  I LD+P 
Sbjct: 118 KEHYLSWLETLEYEQFQIPRPDFVIFLDMPT 148


>gi|29841447|gb|AAP06479.1| SJCHGC06009 protein [Schistosoma japonicum]
          Length = 238

 Score = 38.9 bits (89), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           G+F+  EG +  GKTT  SLL + L    Q+K   V        TP        L   G 
Sbjct: 8   GIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRD--TPLGHQLDAYLGGNG- 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
            +  + A  ++F A R +  ++ IR A+  G  ++ DR++ S  AY   +
Sbjct: 65  -DINSHALHLLFTANRWEK-QSEIRNAISNGISVVADRYIYSGIAYTAAK 112


>gi|118463240|ref|YP_883352.1| thymidylate kinase [Mycobacterium avium 104]
 gi|254776646|ref|ZP_05218162.1| thymidylate kinase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118164527|gb|ABK65424.1| thymidylate kinase [Mycobacterium avium 104]
          Length = 210

 Score = 38.9 bits (89), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 25/178 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEA--ARHVLLS 56
           + I+ EG++GAGK T    L++  +     V         R      AAEA    H  L+
Sbjct: 1   MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60

Query: 57  CGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109
             V      A A++FA   AA +  +E + R    +  +++ DR++ S+ AY   R    
Sbjct: 61  SSV-----YAMAMLFALDRAAAVGDIEGLRR----DHDVVIMDRYVASNAAYTAARLHQD 111

Query: 110 -DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            D     ++ +L+   ++   PD  ++L +  ++  +R ++R         D +ER D
Sbjct: 112 ADGPAVAWVHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYERDD 169


>gi|194880945|ref|XP_001974613.1| GG20995 [Drosophila erecta]
 gi|190657800|gb|EDV55013.1| GG20995 [Drosophila erecta]
          Length = 211

 Score = 38.9 bits (89), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 16/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + +GK+T   LL   L  K         P  +       +  L+   D   
Sbjct: 7   GALIIFEGCDRSGKSTQSQLLVALLNSKGIPALPMNFPERSSIIGQVINSYLTNSKD-LP 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E   ++F+  R +H+ N I+  L EG+ ++ DR+  S  AY     +++ L  D     
Sbjct: 66  DEVIHLMFSTNRWEHM-NYIKQNLHEGRTVVVDRYSFSGVAY----SAAKGLDFDWCYAP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD    L  P       + NR    E    + +E+  V    +  ++F  I   
Sbjct: 121 ERGLIKPDAVFYLRAPP----ADLTNRTQYGE----ERYEK--VEFQGRVAKVFDRICSE 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           Q    H  D+    + +   I +I  EL+ K
Sbjct: 171 QGSYWHQFDATKPVEDLHAQIASITEELLPK 201


>gi|145503822|ref|XP_001437883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405044|emb|CAK70486.1| unnamed protein product [Paramecium tetraurelia]
          Length = 205

 Score = 38.9 bits (89), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 17/140 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVD 60
           GLFI  EG++  GK+T   LL   L  K             P    +  +++S    G  
Sbjct: 7   GLFIVLEGLDKCGKSTQTELLSEALDAKKMQF---------PDRSTSMGLIISDYLKGKR 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +   ++F+A R +  +N I   L +G  ++CDR+  S  A+     S++ L +   
Sbjct: 58  DINDQVIHLLFSANRWE-AQNTIIETLNKGINIVCDRYAYSGVAF----SSAKGLPIQWC 112

Query: 121 QEISVQEVMPDCTIILDLPV 140
           ++       PD  I L  P+
Sbjct: 113 KQCDSGLPKPDLVIYLRAPI 132


>gi|41409459|ref|NP_962295.1| thymidylate kinase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|41398290|gb|AAS05911.1| Tmk [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 210

 Score = 38.9 bits (89), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 25/178 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEA--ARHVLLS 56
           + I+ EG++GAGK T    L++  +     V         R      AAEA    H  L+
Sbjct: 1   MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60

Query: 57  CGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109
             V      A A++FA   AA +  +E + R    +  +++ DR++ S+ AY   R    
Sbjct: 61  SSV-----YAMAMLFALDRAAAVGDIEGLRR----DHDVVIMDRYVASNAAYTAARLHQD 111

Query: 110 -DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            D     ++ +L+   ++   PD  ++L +  ++  +R ++R         D +ER D
Sbjct: 112 ADGPAVAWVHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYERDD 169


>gi|226468432|emb|CAX69893.1| deoxythymidylate kinase (thymidylate kinase) [Schistosoma
           japonicum]
          Length = 238

 Score = 38.5 bits (88), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           G+F+  EG +  GKTT  SLL + L    Q+K   V        TP        L   G 
Sbjct: 8   GIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRD--TPLGHQLDAYLGGNG- 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
            +  + A  ++F A R +  ++ IR A+  G  ++ DR++ S  AY   +
Sbjct: 65  -DINSHALHLLFTANRWEK-QSEIRNAISNGISVVADRYIYSGIAYTAAK 112


>gi|131840166|ref|YP_001096175.1| ORF140 [Cyprinid herpesvirus 3]
 gi|71068047|gb|AAZ23013.1| thymidylate kinase [Cyprinid herpesvirus 3]
 gi|84181500|gb|ABC55103.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706741|gb|ABG42967.1| ORF140 [Cyprinid herpesvirus 3]
 gi|129560659|dbj|BAF48954.1| deoxythymidylate kinase [Cyprinid herpesvirus 3]
          Length = 233

 Score = 38.5 bits (88), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 24/206 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ +GK+T   +L + L     +  + R P   TP  +     LL+    + 
Sbjct: 21  GALIILEGVDRSGKSTQCRMLVKALLEMGVEAELMRFPDRTTPIGQMINSYLLNKS--DL 78

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   ++ R  LM+G  ++ DR+  S  A+   +   +   L+  + 
Sbjct: 79  DDHVVHLLFSANRWEAASDLKR-KLMKGTTIVLDRYAFSGVAFTAAKPGFE---LEWCKR 134

Query: 123 ISVQEVMPDCTIILDLPVDI-----GLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQ 175
             V    PD  + L +         G    +   S  ++A  + FE   KDV ++ ++  
Sbjct: 135 TDVGLPKPDLVVFLAIEASAVESRGGFGDERYEVSAFQAAVRENFEVLMKDVTVNWRK-- 192

Query: 176 IFLDIARNQPDRCH-----IVDSAHS 196
             +D AR  P++ H     + D AH+
Sbjct: 193 --VDAART-PEQVHGDILRLTDDAHN 215


>gi|313896786|ref|ZP_07830334.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974703|gb|EFR40170.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 229

 Score = 38.5 bits (88), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LS 56
           M  G     E  +G+GK T   LL   L+R  + +  +T       ++   R  L     
Sbjct: 1   MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQ 113
              D+  A A +  FA  R              G ++L DR+  S+  +Q    + D+ +
Sbjct: 61  THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDL 138
             FLD L ++  +++   +PD    LD+
Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDM 148


>gi|320530090|ref|ZP_08031160.1| dTMP kinase [Selenomonas artemidis F0399]
 gi|320137523|gb|EFW29435.1| dTMP kinase [Selenomonas artemidis F0399]
          Length = 229

 Score = 38.5 bits (88), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LS 56
           M  G     E  +G+GK T   LL   L+R  + +  +T       ++   R  L     
Sbjct: 1   MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQ 113
              D+  A A +  FA  R              G ++L DR+  S+  +Q    + D+ +
Sbjct: 61  THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDL 138
             FLD L ++  +++   +PD    LD+
Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDM 148


>gi|326480672|gb|EGE04682.1| thymidylate kinase [Trichophyton equinum CBS 127.97]
          Length = 235

 Score = 38.5 bits (88), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 3/143 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ AGK+T  + L +FL  + ++    R P  T A     +  L  G  +  
Sbjct: 13  GALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYLR-GEIQLD 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ + L LD     
Sbjct: 72  DHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKE-LQLDWAWRP 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            V    PD    L++  ++   R
Sbjct: 130 EVGLPRPDIWFFLNISTEVAAAR 152


>gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM
           3638]
 gi|23822176|sp|Q8U070|SRP54_PYRFU RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling
           The Ribonucleic Core Of The Signal Recognition Particle
           From The Archaeon Pyrococcus Furiosus.
 gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling
           The Ribonucleic Core Of The Signal Recognition Particle
           From The Archaeon Pyrococcus Furiosus.
 gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM
           3638]
          Length = 443

 Score = 38.5 bits (88), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64
           GI+G+GKTT ++ L R+ Q++ Y V V    T  PG   A    R +L    ++ FG   
Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG---AYHQLRQLLDRYHIEVFGNPQ 163

Query: 65  EAEAIVFAAARLDHVEN 81
           E +AI  A   +D+ ++
Sbjct: 164 EKDAIKLAKEGVDYFKS 180


>gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
 gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
          Length = 453

 Score = 38.5 bits (88), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 9/74 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64
           GI+G+GKTT ++ L R+ Q+  Y V V    T  PG   A +  + ++   G++ FG   
Sbjct: 112 GIQGSGKTTSVAKLSRYFQKHGYKVGVVCSDTWRPG---AYQQLKQLIEPYGIEVFGNPE 168

Query: 65  EAEAIVFAAARLDH 78
           E  AI  A   +++
Sbjct: 169 EKNAIKLAKEGVEY 182


>gi|207723641|ref|YP_002254039.1| hypothetical protein RSMK01034 [Ralstonia solanacearum MolK2]
 gi|206588844|emb|CAQ35806.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 216

 Score = 38.5 bits (88), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 9/163 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGA 64
            I+FEGI+G+GKTT  +LL   L                P  EA   +    G  D FG 
Sbjct: 11  LITFEGIDGSGKTTAATLLVERLAAHGVKTIFHPNRSLAPVREALDALAQEDGYSDRFGL 70

Query: 65  -EAEAIVFAAARLDHVENV-IRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  + F AA +   E + +RP L  E ++++ DR+  +  +      ++    L  L 
Sbjct: 71  FGAGNMQFLAAVMKWRELLDLRPLLEREDQVVVLDRYFYTHLSLATTHATTNSAHLRRLF 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           +I      PD T+ +D+   +  +RV  R   R+   +DY  R
Sbjct: 131 KIFPT---PDITLFMDIDPKLAGERVLKRG--RDVNAVDYLAR 168


>gi|262203512|ref|YP_003274720.1| thymidylate kinase [Gordonia bronchialis DSM 43247]
 gi|262086859|gb|ACY22827.1| thymidylate kinase [Gordonia bronchialis DSM 43247]
          Length = 211

 Score = 38.5 bits (88), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 9/175 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  I+ EG++GAGK T ++ L     R+   V     P  G +  A+ A   L     D 
Sbjct: 2   GELIAVEGLDGAGKNTLVTGLVDEWTRRGARVATFTFPRYGRSLTADIASEALHGNHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115
                A A++FA  R   V  +   A     ++L DR++ S+ AY   R     D     
Sbjct: 62  RESVYAMALLFALDRSAAVAEIAAAAEAADVVIL-DRYVASNAAYSAARLHQDADGEVVR 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++  L+   +    PD  I+L +P +  + R ++R S   S   D++ER   + H
Sbjct: 121 WVADLEFGRLGLPAPDRQILLGVPAETAMARAESRASADASRARDHYERDSDLQH 175


>gi|5650772|gb|AAD45944.1|AF089813_7 putative thymidylate kinase [Synechococcus sp. PCC 7002]
          Length = 101

 Score = 38.5 bits (88), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEF 62
          FI FEGI+G+G +T   LL +  QR+     ++ EP         R  L   L    D  
Sbjct: 9  FIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDPV 68

Query: 63 GAEAE-AIVFAAARLDHVENVI 83
              + A +FA  R DH+ N I
Sbjct: 69 QLNRQLAYLFAGDRHDHLYNEI 90


>gi|308805831|ref|XP_003080227.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
 gi|116058687|emb|CAL54394.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
          Length = 1006

 Score = 38.5 bits (88), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 12/180 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  + FEG +  GK+T    L + L+++     + R P  T          L    D   
Sbjct: 359 GALVLFEGADRCGKSTQARRLVKTLEQRGVRAELWRYPDRTTKTGEMIDAYLRSESDTAD 418

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A A  ++FAA R +  + ++   L +G  L+CDR+  S  A+   +   + L L   +  
Sbjct: 419 A-AIHLLFAANRWEK-KALMERKLADGVTLVCDRYSYSGCAFTAAK-GVEGLDLTWCKAP 475

Query: 124 SVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            V    PD  + L+L ++   +R    + RY   E       +R    + E  R+ + D+
Sbjct: 476 EVGLPRPDALMYLELSLEDAARRGGFGEERYETTE------MQRAVKEMFESMREPWWDV 529


>gi|196234357|ref|ZP_03133185.1| thymidylate kinase [Chthoniobacter flavus Ellin428]
 gi|196221549|gb|EDY16091.1| thymidylate kinase [Chthoniobacter flavus Ellin428]
          Length = 253

 Score = 38.1 bits (87), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 38/174 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---------VTREPGGTPAAEAARHV 53
           +G   + EG +G+G++T I +L ++L+   Y V          V+ E           H 
Sbjct: 22  AGKLFAIEGADGSGRSTQIGMLSQWLEANGYAVRHMGLRRSNLVSEELEEAKQGNVLTHT 81

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GER 109
            LS            + +A    D + + I PAL  G I++ DR++ +  A       +R
Sbjct: 82  TLS------------LFYATDFFDQLVHEIVPALRAGLIVIADRYIYTLMARDLVRGADR 129

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
             +++L+  +L        +PD          +G  ++  R + ++++ LDY+E
Sbjct: 130 AWTRNLYSPAL--------VPDAVFYF----RVGAAQLVER-NFQKNSTLDYWE 170


>gi|289614663|emb|CBI58566.1| unnamed protein product [Sordaria macrospora]
          Length = 279

 Score = 38.1 bits (87), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 7/137 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ +GKTT + LL+   +++   V   R P   TP  +     L S    + 
Sbjct: 27  GALIVVEGLDRSGKTTQVKLLEERFRKEGKRVKTMRFPDRTTPIGQMIDSYLKSQA--QM 84

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121
                 ++F+A R + V+  I   L  G  L+ DR+  S   Y   +++ S  L      
Sbjct: 85  EDHVIHLLFSANRWEAVKT-ITTELSLGTTLILDRYYYSGIVYSAAKQNPSLSLSWARAP 143

Query: 122 EISVQEVMPDCTIILDL 138
           EI +    PD  + LDL
Sbjct: 144 EIGLPR--PDLVLFLDL 158


>gi|313680444|ref|YP_004058183.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977]
 gi|313153159|gb|ADR37010.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977]
          Length = 199

 Score = 38.1 bits (87), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 13/148 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG  G GKTT    L + L+ +     V   P      E   H      V     
Sbjct: 1   MYIAIEGPIGVGKTTLTRHLAQALEGEALFEVVEENPFLPLFYEDPEHYAFKVQV----- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQE 122
                 F  +R   +E++ +P L E + ++ D   D  + +           L+ +  Q 
Sbjct: 56  -----FFLLSRYKQLEHLAQPRLFE-RAVVADYLFDKDFIFASLNLEGHEWELYQELYQS 109

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +S +   PD TI L  P+++ L+R++ R
Sbjct: 110 LSPRIPTPDLTIYLRAPLEVLLERIRRR 137


>gi|209965955|ref|YP_002298870.1| thymidylate kinase [Rhodospirillum centenum SW]
 gi|209959421|gb|ACJ00058.1| thymidylate kinase, putative [Rhodospirillum centenum SW]
          Length = 220

 Score = 38.1 bits (87), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 20/149 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EGI+GAGK T    +   L  +      T  P  G T AA   +  LL+ G +E 
Sbjct: 1   MLIAIEGIDGAGKRTLTDAVATLLAERGLTCSATSFPQYGRTRAARGVQD-LLNLGPEEL 59

Query: 63  GA--EAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQ-- 113
                 EA  + A  LD  E+     L+ G      ++L DR++ S+ AYQ  R  +   
Sbjct: 60  ARIDPREAAAWYA--LDRFESR---GLLAGLRAGHDVVLIDRWIASNIAYQRARAPAAEG 114

Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLP 139
                ++ SL+       +PD T+++  P
Sbjct: 115 PGLEAWILSLETGLYGLPVPDATVLVATP 143


>gi|254822994|ref|ZP_05227995.1| thymidylate kinase [Mycobacterium intracellulare ATCC 13950]
          Length = 210

 Score = 37.7 bits (86), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 33/182 (18%)

Query: 5   LFISFEGIEGAGKTTHI-SLLKRF---------LQRKNYDVHVTREPGGTPAAEA--ARH 52
           + I+ EG++GAGK T    LL  F         L    Y   VT +     AAEA    H
Sbjct: 1   MLIAIEGVDGAGKRTLTEGLLSAFEAAGRSVATLAFPRYGQSVTADI----AAEALHGEH 56

Query: 53  VLLSCGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
             L+  V      A A +FA   AA ++ +E + R    +  +++ DR++ S+ AY   R
Sbjct: 57  GDLASSV-----YAMATLFALDRAAAVEQLEGLRR----DHDVVIMDRYVASNAAYTAAR 107

Query: 110 -----DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
                      ++  L+   +    PD  ++L +P ++  +R ++R +       D +ER
Sbjct: 108 LHQDAGGPAVAWVHGLEYQRLGLPAPDWQVLLAVPAELAGQRARSRAASDPGRARDSYER 167

Query: 165 KD 166
            D
Sbjct: 168 DD 169


>gi|118618060|ref|YP_906392.1| thymidylate kinase [Mycobacterium ulcerans Agy99]
 gi|118570170|gb|ABL04921.1| thymidylate kinase Tmk [Mycobacterium ulcerans Agy99]
          Length = 222

 Score = 37.7 bits (86), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T    L++  +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60

Query: 63  GAE-AEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH- 114
            +  A A +FA   AA +D +  +     +  ++++ DR++ S+ AY   R   DS+   
Sbjct: 61  SSVFAMATLFALDRAAAVDEIHGLC----LAYEVVILDRYVASNAAYSAARLHQDSAGEA 116

Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             ++  ++        PD  ++L +PV++  +R + R         D +ER D  + ++ 
Sbjct: 117 VAWVGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYERDD-GLQQRT 175

Query: 174 RQIFLDI-ARNQPDRCHIVDSAHSFQSVATNILN 206
             ++ ++ A     R  +VD+     ++A  +++
Sbjct: 176 GSVYAELAAAGWGGRWLVVDADVDPGALAATLMS 209


>gi|255513966|gb|EET90230.1| Thymidylate kinase-like protein [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 240

 Score = 37.7 bits (86), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 18/128 (14%)

Query: 91  KILLCDRFLDSSY-------AYQGERDSSQHL--FLDSLQEISVQEVMPDCTIILDLPVD 141
           K+++ DR++D++        A  GE +    +     +   +      PD TI++D P++
Sbjct: 107 KVIIFDRYIDTALTHAVARAALAGEHEDGPAIKSLFGTFFALKEHIEWPDLTIVIDTPIE 166

Query: 142 IGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
           +     + R   RE+      +RK    I E  R+    +A  +PDR H +D   S + +
Sbjct: 167 V----AEGRAMKRENHGYSETDRKGFKTISEAYRK----LASYEPDRVHFIDGRKSPEEI 218

Query: 201 ATNILNIV 208
            + I +++
Sbjct: 219 LSEIKDLI 226


>gi|183981320|ref|YP_001849611.1| thymidylate kinase Tmk [Mycobacterium marinum M]
 gi|183174646|gb|ACC39756.1| thymidylate kinase Tmk [Mycobacterium marinum M]
          Length = 217

 Score = 37.7 bits (86), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 19/215 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T    L++  +     V     P  G +  A+ A   L      E 
Sbjct: 1   MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHG----EH 56

Query: 63  GAEAEAIVFAAAR---LDHVENV--IRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114
           G  A + VFA A    LD    V  I    +  ++++ DR++ S+ AY   R   DS+  
Sbjct: 57  GDLASS-VFAMATLFALDRAAAVDEIHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGE 115

Query: 115 --LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
              ++  ++        PD  ++L +PV++  +R + R         D +ER D  + ++
Sbjct: 116 AVAWVGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYERDD-GLQQR 174

Query: 173 RRQIFLDI-ARNQPDRCHIVDSAHSFQSVATNILN 206
              ++ ++ A     R  +VD+     ++A  +++
Sbjct: 175 TGSVYAELAAAGWGGRWLVVDADVDPGALAATLMS 209


>gi|159109111|ref|XP_001704822.1| CDC8 [Giardia lamblia ATCC 50803]
 gi|157432895|gb|EDO77148.1| CDC8 [Giardia lamblia ATCC 50803]
          Length = 254

 Score = 37.7 bits (86), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  GLF+  EG++ AGK T I  +   L++    V V   P  T  + A     L   +D
Sbjct: 29  VTRGLFVVIEGLDRAGKDTMIGQVVALLRQAGESVVVQAFPDRTTKSGAVLDRFLQRELD 88

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +   + +A  R   +E V+   L+ G  ++C R+  S  AY   +       +++ 
Sbjct: 89  LSDWDCHRL-YAENR-KELEEVLCNTLLAGTTVICSRYAYSGVAYTAAKGHDMRRCMEAD 146

Query: 121 QEISVQEVMPDCTIILDL 138
           + +    + PD  I LD+
Sbjct: 147 KGL----LRPDLVIFLDV 160


>gi|116200466|ref|XP_001226045.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
 gi|88175492|gb|EAQ82960.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
          Length = 317

 Score = 37.7 bits (86), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 3/135 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ +GKTT + LL++        V V R P  T          L   V E  
Sbjct: 65  GALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLKSQV-EMD 123

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R +  + +    L +   +LCDR+  S   Y   + +   L L   +  
Sbjct: 124 DHVIHLLFSANRWEAAKTITH-LLTQSTTVLCDRYYHSGIVYSSAKQNPS-LTLPWARGP 181

Query: 124 SVQEVMPDCTIILDL 138
            +    PD  + LDL
Sbjct: 182 EIGLPRPDLVLFLDL 196


>gi|167769946|ref|ZP_02441999.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM
           17241]
 gi|167667937|gb|EDS12067.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM
           17241]
          Length = 221

 Score = 37.7 bits (86), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 8/157 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVD 60
           G  I  +G++GAGK T  +LL     R          P  T P++   +  L       D
Sbjct: 3   GRLIVIDGLDGAGKQTQAALLLDRFARAGVPARGISFPDYTHPSSALVKQYLAGEFGQAD 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQH-LFLD 118
           +  A A +  +A  R        +   + G  ++ DR+  S+  +Q G+    Q   F+D
Sbjct: 63  DVPAYAASSFYAVDRFASYVGYWKDDYLAGHTIIADRYATSNLIHQMGKLPRGQWDAFID 122

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYS 152
              +   +++    PD  + LD+  D+  + +  RY 
Sbjct: 123 WSADFEYEKLGLPKPDAVLFLDMHPDVSERLLMKRYG 159


>gi|76664708|emb|CAJ17794.1| thymidylate kinase [Candidatus Phytoplasma solani]
          Length = 68

 Score = 37.7 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 30/51 (58%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           I FEG++G+GKT+ I  +KR L+ +  +V V R  G +   E+ R   L+
Sbjct: 3  LIIFEGLDGSGKTSLIKSVKRELKEQGKEVIVIRGLGSSTIGESIRETFLT 53


>gi|224055681|ref|XP_002298600.1| predicted protein [Populus trichocarpa]
 gi|222845858|gb|EEE83405.1| predicted protein [Populus trichocarpa]
          Length = 222

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ +GKT+  S L  +L+   +   + R P  + +        LS       
Sbjct: 18  GALIVLEGLDRSGKTSQSSRLLSYLEGLGHSTELWRFPDRSTSVGQMISAYLS-NKSHLD 76

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R +   +++   L  G  L+ DR+  S  A+     S++ L ++  +  
Sbjct: 77  DRTIHLLFSANRWEK-RSLMETQLKNGTTLVVDRYSYSGVAFS----SAKGLDIEWCKAP 131

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            V  + PD  + LD+P +   +R
Sbjct: 132 EVGLLAPDIVLYLDIPPEKAAER 154


>gi|325119339|emb|CBZ54892.1| Thymidylate kinase, related [Neospora caninum Liverpool]
          Length = 271

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEF 62
           G  + FEGI+ +GK+T   L    L ++     + R P  T +  +     L S      
Sbjct: 9   GCLVVFEGIDRSGKSTQARLAYERLLKEGQPTELIRFPDRTTSIGQVLDKFLASATWSNE 68

Query: 63  G------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           G       +   ++FAA R +    ++R AL EGK +L DR+  S  AY
Sbjct: 69  GPCQIPPPQLTHLLFAANRWEAQARILR-ALGEGKTVLVDRYSFSGIAY 116


>gi|121720030|ref|XP_001276713.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1]
 gi|119404925|gb|EAW15287.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1]
          Length = 1288

 Score = 37.4 bits (85), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
            + SG F++F G  G GK+T ISLL+RF +      H T E GG
Sbjct: 1059 IQSGQFVAFVGPSGCGKSTLISLLERFYE----PTHGTVEVGG 1097


>gi|85091013|ref|XP_958694.1| thymidylate kinase [Neurospora crassa OR74A]
 gi|12718338|emb|CAC28573.1| related to thymidylate kinase [Neurospora crassa]
 gi|28920075|gb|EAA29458.1| thymidylate kinase [Neurospora crassa OR74A]
          Length = 309

 Score = 37.4 bits (85), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 9/138 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
           G  I  EG++ +GKTT + LL+ RFL +    V   R P   TP  +     L S    +
Sbjct: 24  GALIVIEGLDRSGKTTQVKLLEDRFL-KAGKKVKTMRFPDRTTPIGQMIDSYLKSQA--Q 80

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120
                  ++F+A R + V+  I   L +G  L+ DR+  S   Y   +++ S  L     
Sbjct: 81  MDDHVIHLLFSANRWEAVKK-ITSELSQGTTLILDRYYHSGIVYSAAKQNPSLSLSWARA 139

Query: 121 QEISVQEVMPDCTIILDL 138
            EI +    PD  + LDL
Sbjct: 140 PEIGLPR--PDLVLFLDL 155


>gi|196015603|ref|XP_002117658.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
 gi|190579827|gb|EDV19916.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
          Length = 211

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 16/175 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G  I  EG +  GK+T   +L   L        + + P   TP  + A   L      
Sbjct: 6   NRGALIIIEGGDRTGKSTQSKMLVDALLADGKQAELVKFPDRTTPIGKLAGSYLQKT--- 62

Query: 61  EFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-L 117
               E  AI  +F+A R + V ++I   L  G  L+ DR+  S  AY     S++  F +
Sbjct: 63  -LDLEDHAIHLIFSANRWEKVPSIIE-RLENGITLVVDRYAFSGVAYT----SAKRGFDI 116

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +  ++       PD  I L LPVD    R Q      ES     F+++ V   EK
Sbjct: 117 EWCKQSDTGIPAPDLVIYLTLPVDQATSRDQYGTERYEST---QFQKRAVENFEK 168


>gi|225077170|ref|ZP_03720369.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens
           NRL30031/H210]
 gi|224951518|gb|EEG32727.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens
           NRL30031/H210]
          Length = 211

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 15/149 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G+GKT     L R L      + ++  P   P       +     V   G  
Sbjct: 5   YIVVEGAIGSGKTA----LSRRLAEHFSALLLSENPDHNPFL-----MKFYSNVSNNGLA 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
           AE + F   R + V N+I     +G +++ D FL   D  +      D  Q LF D  Q 
Sbjct: 56  AE-LFFLTRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFADMKQR 112

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           I  Q V PD  I L   V+   KR+Q R+
Sbjct: 113 ILPQYVEPDVVIYLQTAVENNRKRLQKRH 141


>gi|300779615|ref|ZP_07089471.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030]
 gi|300533725|gb|EFK54784.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030]
          Length = 208

 Score = 37.4 bits (85), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV--DE 61
           + ++ EGI+GAGK T +  L R L   +  D   T      P    + H  L+      +
Sbjct: 1   MIVALEGIDGAGKNTLVQKLIRELGATDRIDSAATM---AFPRYNESLHAQLAADALHGK 57

Query: 62  FG-----AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--SQH 114
            G     A   A++FA  R   V  + + A     +LL DR++ S+ AY   R       
Sbjct: 58  MGDLTDSAHGMAVMFALDRYGVVGELWQWASSPSDVLLLDRYVASNAAYTSARTGRIDDR 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
            ++  L+   +    P   +++D   D    R ++R     S   D +ER
Sbjct: 118 AWVAGLEFDRLGLPRPALQVLVDTAPDTARARARSREQADASRARDRYER 167


>gi|259480991|tpe|CBF74121.1| TPA: thymidylate and uridylate kinase (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 223

 Score = 37.4 bits (85), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 87/225 (38%), Gaps = 16/225 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ AGK++    L   LQ     V   R P   TP  +     L   G    
Sbjct: 11  GALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPDRTTPIGKLIDGYLR--GQSHL 68

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +  ++F+A R + V   I   +  G  ++ DR+  S   Y   + ++  L L+   +
Sbjct: 69  DDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEWAWQ 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V    PD  + L +  +   KR        E+      E     + E    IF D+ R
Sbjct: 127 PEVGLPKPDLCLFLSISPEEAAKRGGFGGERYEN------EAMQTRVRELFNTIF-DLQR 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSSKKDI 225
               R  I+D+  S   V+ +ILN+V E +      SPL     I
Sbjct: 180 ATDIR--IIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 222


>gi|315049351|ref|XP_003174050.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
 gi|311342017|gb|EFR01220.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
          Length = 237

 Score = 37.0 bits (84), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 94/219 (42%), Gaps = 16/219 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ AGK+T  + L +FL  + +     R P  T +     +  L   + +  
Sbjct: 15  GALVVVEGLDRAGKSTQCTRLHQFLVDQGHKAKYIRFPDRTTSIGKMINQYLRAEI-QLD 73

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     IR  +  G  ++ DR+  S   Y   ++ ++ L LD     
Sbjct: 74  DHAVHLLFSANRWEAAAQ-IRQDIEAGITVIVDRYSYSGAVYSAAKE-NKELQLDWAWRP 131

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V    PD    L++  ++         + R     + +E   V + ++  ++FL ++  
Sbjct: 132 EVGLPRPDIWFFLNISTEVA--------AARGGYGTERYE--TVNLQQRVGKLFLSLSGL 181

Query: 184 QPDR-CHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219
           + +    IVD+      ++++I + V + + K   + PL
Sbjct: 182 KGNEDMRIVDAGREMDEISSDIRDEVLQTMTKIDSIGPL 220


>gi|320100638|ref|YP_004176230.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM
          2162]
 gi|319752990|gb|ADV64748.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM
          2162]
          Length = 221

 Score = 37.0 bits (84), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          G  I F G+EGAGKTTHI LL   L+++   V  T
Sbjct: 2  GRVIVFAGLEGAGKTTHIRLLAIRLKKRGLRVRTT 36


>gi|291296955|ref|YP_003508353.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279]
 gi|290471914|gb|ADD29333.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279]
          Length = 206

 Score = 37.0 bits (84), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG+ G GKTT   LL   L  ++  + V  E    P        L       +G 
Sbjct: 1   MYIAIEGVIGVGKTTLARLLAERLGAESL-LEVVEENPFLP--------LFYQDPVRYGF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + + + F  +R   +  + +P+L  G ++   L D+  D+ +A      +   L+ D  +
Sbjct: 52  KVQ-VFFLLSRYKQLLPLAQPSLFTGGVVADYLFDK--DAIFAAMNLSGAEWDLYNDLYR 108

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR 150
            ++ +   PD TI L  P+ + L+R++ R
Sbjct: 109 SLAPKIPTPDLTIYLRAPLPVILERIRRR 137


>gi|170097605|ref|XP_001880022.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645425|gb|EDR09673.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 228

 Score = 37.0 bits (84), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 25/224 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG++ +GKTT  SLL   L+ +     + + P  T          L     E    
Sbjct: 5   FIVIEGLDRSGKTTQTSLLHTRLEAEGIQAKLMKFPDRTTVIGQMIDSYLRSD-SELDDH 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLFLDSL 120
              ++F+A R + + + I   L  G  ++CDR+  S  A+   +       S  L  +  
Sbjct: 64  VIHLLFSANRWE-LASYITQLLEAGTPIICDRYAFSGIAFSASKGIPSSTPSPKLPYEWC 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +    PD  + LD+           R  LR     + +E+++  +  + R IF  +
Sbjct: 123 RSPDIGLPAPDLVLFLDI--------APERAKLRGGYGEERYEKEE--LQARVRGIFQRL 172

Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
                    +P R +   VD+    + VA  + ++V  LV  R+
Sbjct: 173 GSEMQNETQRPVRPNWVTVDAGRERKVVANEVWSLVEPLVINRI 216


>gi|159467729|ref|XP_001692044.1| hypothetical protein CHLREDRAFT_94429 [Chlamydomonas reinhardtii]
 gi|158278771|gb|EDP04534.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 167

 Score = 37.0 bits (84), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 16/109 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEGI+  GK+T  SLL   LQ++     + R P         R  L+   ++E+ 
Sbjct: 50  GALIVFEGIDRCGKSTQCSLLLESLQKQGVPAELWRFP--------DRTTLIGGLINEYL 101

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
            +  ++       +F A R +  + ++R  L  G  L+ DR+  S  AY
Sbjct: 102 QKKASLNDAAVHMLFVANRHEKRDEMLR-LLAGGTTLVLDRYSYSGVAY 149


>gi|302685604|ref|XP_003032482.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
 gi|300106176|gb|EFI97579.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
          Length = 221

 Score = 37.0 bits (84), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++ +GK+T  + LK  L      V + + P  T A        L   + E  
Sbjct: 5   GAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNI-EMD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
                ++++A R + + + I   L EG  ++CDR+  S  A+   +
Sbjct: 64  DHVVHLLYSANRWE-LASRISTLLTEGTTIICDRYAFSGIAFSASK 108


>gi|227550018|ref|ZP_03980067.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227077927|gb|EEI15890.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 201

 Score = 37.0 bits (84), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 15/171 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGK T ++ +K  L  +        +      A  A H  +   VD   A
Sbjct: 1   MIIAVEGIDGAGKNTLVNAIKGELGAETVAFPRYADSIYAQLAREALHGRMGDLVDS--A 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122
              A +FA  R      +   A    KI++ DR++ S+ AY   R  D +   ++  L+ 
Sbjct: 59  HGMATLFALDRAGAKPLLDTFATAPDKIIILDRYVASNAAYTAARTGDDAAARWVFELEF 118

Query: 123 ISVQEVMPDCTIILDL-PVDIGLK----------RVQNRYSLRESACLDYF 162
           + +    PD  +++D  P + G +          RV++RY    S   D F
Sbjct: 119 VRLGLPRPDLQVLVDTDPAEAGQRARRREEGDAERVRDRYESDASLQQDTF 169


>gi|9971893|gb|AAG10455.1|AF279106_17 predicted deoxypurine kinase [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 221

 Score = 37.0 bits (84), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 18/179 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GKTT   L  +  +  NYD  +  +P   P  +          +      
Sbjct: 13  YIAIEGPIGVGKTT---LANKIAETFNYDSFL-EQPAENPFLKNFYKNPSQSAL------ 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123
           A  + F   R+  ++++ + +L E  + + D  +  D  +A     +    L+      +
Sbjct: 63  ATQLFFLFQRMQQIQDLKQRSLFET-VRVADFLIEKDRLFAEVTLSNEEMDLYDKVYDHL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181
           ++    PD  I L  P+D+   R+  R ++ E    LDY ER    +++   + FLD +
Sbjct: 122 TLDAPTPDLVIYLQAPIDVLKDRITKRGNINEQYLTLDYLER----LNDAYSRFFLDYS 176


>gi|237749054|ref|ZP_04579534.1| signal recognition particle [Oxalobacter formigenes OXCC13]
 gi|229380416|gb|EEO30507.1| signal recognition particle [Oxalobacter formigenes OXCC13]
          Length = 454

 Score = 37.0 bits (84), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFG 63
            I   G++G GKTT +  L R+L Q K   V         PAA +    V    GVD +G
Sbjct: 106 IILMAGLQGVGKTTTVGKLARYLKQEKKKKVLTVSTDVYRPAAIKQLETVSGQSGVDFYG 165

Query: 64  AEA-EAIVFAAARLDHVE 80
           ++A E I  A A LDH +
Sbjct: 166 SDASEPIQIAKAALDHAK 183


>gi|209882114|ref|XP_002142494.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
 gi|209558100|gb|EEA08145.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
          Length = 208

 Score = 37.0 bits (84), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           M  G  I FEG + +GKT   + L    + +N +  +   P   T         L +C  
Sbjct: 1   MRRGALIVFEGTDRSGKTLQSNKLAEKFKNENINCILIGFPDRSTNIGYLLDLYLRNC-- 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           +    E   ++F+A R ++ E  I+  L  G  ++CDR+  S  AY
Sbjct: 59  ENMRPEVSHLLFSANRWEYFEK-IKTYLESGVTVICDRYAFSGVAY 103


>gi|119719417|ref|YP_919912.1| GTP-binding signal recognition particle [Thermofilum pendens Hrk 5]
 gi|119524537|gb|ABL77909.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermofilum
           pendens Hrk 5]
          Length = 431

 Score = 36.6 bits (83), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEF 62
           + F G+EG+GKTT ++ +  + +RK Y V V    T  PG   A E  R +    GV  +
Sbjct: 102 VMFVGLEGSGKTTTVAKVANYYKRKGYRVGVVAADTYRPG---AYEQLRSLAEKVGVPFY 158

Query: 63  G 63
           G
Sbjct: 159 G 159


>gi|145225292|ref|YP_001135970.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315445589|ref|YP_004078468.1| thymidylate kinase [Mycobacterium sp. Spyr1]
 gi|145217778|gb|ABP47182.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315263892|gb|ADU00634.1| thymidylate kinase [Mycobacterium sp. Spyr1]
          Length = 209

 Score = 36.6 bits (83), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDE 61
           + I  EG++GAGK T  + L+   +     V     P      PA  AA  +    G   
Sbjct: 1   MLIVIEGVDGAGKRTLTNGLRAAFESGGRSVATLAFPRYGVSVPADVAAEALHGQHGDLA 60

Query: 62  FGAEAEAIVFAAAR------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----D 110
               A A++FA  R      + H+ +          +++ DR++ S+ AY   R     D
Sbjct: 61  DSVYAMAMLFAMDRAGARDEIGHLTSAY-------SVVILDRYVASNAAYSAARLHQGAD 113

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                ++  L+   ++  +P   ++LD+P ++  +R  NR +   +   D +ER D  + 
Sbjct: 114 GDVVAWVRDLEYGRLKLPVPTWQVLLDVPTELAAQRAVNRAAEDAARARDAYERDD-GLQ 172

Query: 171 EKRRQIFLDIARNQ 184
            +   ++ ++A  Q
Sbjct: 173 RRTGAVYAELAAAQ 186


>gi|49456925|emb|CAG46783.1| DTYMK [Homo sapiens]
          Length = 212

 Score = 36.6 bits (83), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 19/203 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  I  EG++ AGK+T    L   L    +   + R P  +       + ++     V++
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVED 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A    ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  +
Sbjct: 66  HSAH---LLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR              +   ++    E+  + F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
           ++      +VD++ S ++V  +I
Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDI 191


>gi|16975313|pdb|1E9C|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And
           Appnp
 gi|16975314|pdb|1E9D|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
           Aztmp And Adp
 gi|16975315|pdb|1E9E|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
           Dtmp And Adp
          Length = 215

 Score = 36.6 bits (83), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G  I  EG++ AGK+T    L   L    +   + R P    + E  +  LLS  +    
Sbjct: 9   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V  +I+  L +G  L+ DR+  S  AY G   + ++  LD  
Sbjct: 65  DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAYTG---AKENFSLDWC 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR              +   ++    E+  + F  +
Sbjct: 121 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
            ++      +VD++ S ++V  +I
Sbjct: 171 MKDTTLNWKMVDASKSIEAVHEDI 194


>gi|198417043|ref|XP_002128464.1| PREDICTED: similar to deoxythymidylate kinase [Ciona intestinalis]
          Length = 209

 Score = 36.6 bits (83), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 29/224 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  I  EG++ +GKTT    L   L  KN  V + + P  T         +++    +D+
Sbjct: 6   GALIVVEGLDRSGKTTQCQKLITALNEKNQKVKLLKFPDRTTEIGKTINSYLVKKSNLDD 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +    +++  L +G  L+ DR+  S  A+   +   + L LD  +
Sbjct: 66  ---RAIHLLFSANRWEKRSEMLQD-LNDGVTLIVDRYAYSGAAFSAAK---KGLELDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                   PD  + L+L   +   R    + RY   E      F++K          + L
Sbjct: 119 SPDSGLPQPDLVLFLELSTSVAATRGGYGEERYETTE------FQKK----------VAL 162

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLSS 221
           +    + +   ++D+      V  ++L+ V + ++K ++ P+ +
Sbjct: 163 NFHGLKTEEWKVIDAGRDMFEVHQDMLSFVEKTMEKVKLQPVGT 206


>gi|303229617|ref|ZP_07316405.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515742|gb|EFL57696.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a]
          Length = 228

 Score = 36.6 bits (83), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 16/150 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G+GK T    L   LQ + + V     P     A     + LS    +FG
Sbjct: 2   GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLS---GQFG 58

Query: 64  AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114
            + +++       ++A  R        +    +G I++ DR+  S+  +Q  +  D+ + 
Sbjct: 59  TDVDSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKR 118

Query: 115 L-FLDSLQEISVQEV---MPDCTIILDLPV 140
           + FL+ L++    +     PD   +LD+P+
Sbjct: 119 VQFLEWLEDFEFVKFGLPRPDAVCLLDVPL 148


>gi|156088733|ref|XP_001611773.1| thymidylate kinase [Babesia bovis T2Bo]
 gi|154799027|gb|EDO08205.1| thymidylate kinase, putative [Babesia bovis]
          Length = 237

 Score = 36.6 bits (83), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 33/205 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA---- 64
           FEGI+ +GK+T + LL + L  K  D  + +     P  E     +L+  +   GA    
Sbjct: 18  FEGIDRSGKSTQVKLLSQKLTDKGIDHKLLK----FPCYETECGKMLATHLASHGAVRSR 73

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEI 123
               ++F+A R + ++ ++   L+ G  ++ DR+  S  AY  G  + S    + +   +
Sbjct: 74  RCIHLLFSANRWEMMKEIV-ATLVSGTHIIVDRYAFSGVAYSVGAENLSYEWCITADDGL 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ---NRYS-----------LRESACLDYFERKDVMI 169
               + PD  + LD P  +   R      RY              E + L Y+ + D  +
Sbjct: 133 ----LSPDLVVYLDNPAAVSAARSNFGDERYEQEGKLEAVRRVYEEFSSLPYWHKYDATL 188

Query: 170 HEK--RRQIFLDIA---RNQPDRCH 189
            ++   + I+  +A   +++P R H
Sbjct: 189 PQEVLSKAIYERVASVLQSEPRRLH 213


>gi|215275161|sp|P0C8F9|KTHY_ASFK5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 235

 Score = 36.6 bits (83), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 7/109 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF 62
           G+ I+ EGI G  K+T    LK  L+ K YDV     P  +P  +  + +L +   + + 
Sbjct: 3   GILIAIEGINGVEKSTQAIRLKNALENKRYDVIYLHFP--SPNTDTGKLILDVLNKIVKM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAY-QGER 109
            +E    +F   R +    +   AL++   I++ DR++ S  AY Q +R
Sbjct: 61  PSEQLHELFTKHRCEFTAEI--AALLKLNYIVIVDRYIWSGLAYAQADR 107


>gi|326428009|gb|EGD73579.1| thymidylate kinase [Salpingoeca sp. ATCC 50818]
          Length = 213

 Score = 36.2 bits (82), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 35/220 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+ I  EG +  GK+T   LL   L    ++  + R P         R  ++   +D   
Sbjct: 5   GVLIVLEGTDRCGKSTQCKLLVEKLASLGHEAKLMRFP--------ERSTVIGGVIDKYL 56

Query: 61  ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E    A  ++F+A R + V   ++ AL  G  L+ DR+  S  A+     S++ L 
Sbjct: 57  RKEIELDDHAAHLLFSANRWELVSQ-MKQALKSGVSLVIDRYAFSGVAFT----SAKGLD 111

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKR 173
           +D  +        PD  I L+L      KRV     RY + E      F+ K   +  K 
Sbjct: 112 MDWCKSPDANLPSPDLHIHLELDPTEAAKRVGFGSERYEVTE------FQAK---VKAKY 162

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             ++  + R  P R  +  +  S + V   +L +  E +Q
Sbjct: 163 EDLYASMTR-PPRRIDV--AGLSIEDVHAKVLELALEQLQ 199


>gi|327301613|ref|XP_003235499.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
 gi|326462851|gb|EGD88304.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
          Length = 235

 Score = 36.2 bits (82), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 3/143 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ AGK+T  + L +FL  + +     R P  T +     +  L  G  +  
Sbjct: 13  GALVVVEGLDRAGKSTQCARLHQFLVDQGHKTKYIRFPDRTTSIGKMINQYLR-GEIQLD 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  +VF+A R +    + R  +  G  ++ DR+  S   Y   +++ + L LD     
Sbjct: 72  DHAVHLVFSANRWEAAAQIQRD-IESGITVIVDRYSYSGAVYSAAKENKE-LQLDWAWRP 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            V    PD    L++  ++   R
Sbjct: 130 EVGLPRPDIWFFLNVSTEVAAAR 152


>gi|154246424|ref|YP_001417382.1| hypothetical protein Xaut_2483 [Xanthobacter autotrophicus Py2]
 gi|154160509|gb|ABS67725.1| protein of unknown function DUF344 [Xanthobacter autotrophicus Py2]
          Length = 496

 Score = 36.2 bits (82), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
            SGL I+FEG + AGK++ I  L+R L  + + VH    P
Sbjct: 298 RSGLVIAFEGSDAAGKSSTIMRLRRALDPRRFRVHPIAAP 337


>gi|325957954|ref|YP_004289420.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
 gi|325329386|gb|ADZ08448.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
          Length = 447

 Score = 36.2 bits (82), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           I F G++G+GKTT I  L ++LQ+K ++  +       PAA
Sbjct: 106 ILFMGLQGSGKTTSIGKLTKYLQKKGFNPAIVSTDTWRPAA 146


>gi|296817147|ref|XP_002848910.1| thymidylate kinase [Arthroderma otae CBS 113480]
 gi|238839363|gb|EEQ29025.1| thymidylate kinase [Arthroderma otae CBS 113480]
          Length = 233

 Score = 36.2 bits (82), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 3/143 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ AGK+T  + L +FL  + + V   R P  T +        L  G  +  
Sbjct: 11  GALVVVEGLDRAGKSTQCATLYQFLINQGHKVKYIRFPDRTTSIGQMIDKYLR-GEIQLD 69

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A  ++F+A R +     IR  +  G  ++ DR+  S   Y   ++ ++ L LD     
Sbjct: 70  DHAVHLLFSANRWEAAAQ-IRQDIEGGITVIVDRYSYSGAVYSAAKE-NKELQLDWAWRP 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
            +    PD    L++  +   KR
Sbjct: 128 EIGLPRPDIWFFLNISTESAAKR 150


>gi|157865253|ref|XP_001681334.1| thymidylate kinase-like protein [Leishmania major]
 gi|68124630|emb|CAJ02337.1| thymidylate kinase-like protein [Leishmania major strain Friedlin]
          Length = 363

 Score = 36.2 bits (82), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 12/197 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58
           +S   I  EG +GAGK T   LL R +     +VH    P            +LS     
Sbjct: 136 SSAEVIVVEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGKKGP 195

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116
           + E   +  + +++  R       +   L  G  ++ DR+  +++ +Q  +     +  F
Sbjct: 196 ISELNPQLFSFLYSLNRFGCARQ-LHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAF 254

Query: 117 LDSLQEISVQEV-MPDCTII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +  L+ + V+ + +P  T +  LDLP  + L+ ++   + ++   LD  E       E+ 
Sbjct: 255 ISDLEFMEVEWLGLPRATYVLYLDLPPAVALEAMRQDATRKQ---LDIHETAGSDYKERV 311

Query: 174 RQIFLDIARNQPDRCHI 190
           RQ +     + P   HI
Sbjct: 312 RQTYRWCCEHLPGWHHI 328


>gi|145528007|ref|XP_001449803.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417392|emb|CAK82406.1| unnamed protein product [Paramecium tetraurelia]
          Length = 510

 Score = 36.2 bits (82), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 18/138 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DEFG 63
           I   G   AGKTT ++ L   L+ + + V++          EAA  + +  G+   D + 
Sbjct: 89  ICITGGPCAGKTTGLNYLAEKLKERGFSVYI--------VPEAATTLFMGGGMLDLDNYS 140

Query: 64  AEAEA-----IVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLF 116
           AE +      ++    +L+H  NV+       K  ++LCDR L    AY  + +  + + 
Sbjct: 141 AEGKMTFQMNLLNLQMKLEHCFNVLAMLCPPNKTPVMLCDRGLMDGKAYMDQNEWYEMIG 200

Query: 117 LDSLQEISVQEVMPDCTI 134
             +L+E+ +++   D  +
Sbjct: 201 KYNLEEVKLRDERYDAVV 218


>gi|209515281|ref|ZP_03264148.1| thymidylate kinase [Burkholderia sp. H160]
 gi|209504262|gb|EEA04251.1| thymidylate kinase [Burkholderia sp. H160]
          Length = 238

 Score = 36.2 bits (82), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 20/162 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++  G++GAGK++ +  L+    R   +   T     TP     +  +    VD   
Sbjct: 18  GVLVTLCGVDGAGKSSLMERLEGACTRAGLNCVTTF----TPTRRIRKDEVFRQLVDSHW 73

Query: 64  AEAEAIVFAAAR---------------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
             + +   A+AR               + H+ + + PAL  G ++ CDR++ +S A  G 
Sbjct: 74  HTSSSGPDASARRVDMLGILLSIMGDLVQHMSDTVIPALERGDVVFCDRYVFTSQAEIGT 133

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           R          L  I+   + PD    L++      +RV+ R
Sbjct: 134 RSDPAET-APVLHSIAGYLLRPDVAFGLNVSGATSHRRVRAR 174


>gi|56421391|ref|YP_148709.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter ATP binding
          protein [Geobacillus kaustophilus HTA426]
 gi|56381233|dbj|BAD77141.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter (ATP
          binding protein) [Geobacillus kaustophilus HTA426]
          Length = 263

 Score = 36.2 bits (82), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE---PGGTPAAEAARHV 53
          +  G F+SF G  G GKTT +S++   ++     VH+  +   P GT A  A R V
Sbjct: 29 VEKGEFVSFLGPSGCGKTTLLSIIAGLIEPTEGAVHIEGQPIWPSGTAAPAARRAV 84


>gi|17535647|ref|NP_496151.1| hypothetical protein R53.2 [Caenorhabditis elegans]
 gi|3024082|sp|Q22018|KTHY_CAEEL RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|3879168|emb|CAA91347.1| C. elegans protein R53.2, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 218

 Score = 36.2 bits (82), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 13/151 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           GL I FEG++ +GK+T    L   + +K+ +    +  P     A   R   +   +D++
Sbjct: 8   GLLIVFEGLDRSGKSTQAKRLVESINKKSTESGDASSSPSAVLQAFPDRSSSIGKLIDQY 67

Query: 63  -------GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                     A  ++F+A R      +IR  + +G  ++CDR+  S  AY   +   +  
Sbjct: 68  LRKEIDMDEHALHLLFSADRFSK-NQMIRDNIAKGIDVICDRYCYSGVAYSLAKGLPEQW 126

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
              S     V    PD  +  D+  ++  +R
Sbjct: 127 VRSS----DVGLPKPDAVLFFDVSPEVAAQR 153


>gi|37524928|ref|NP_928272.1| hypothetical protein plu0936 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784354|emb|CAE13231.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 178

 Score = 36.2 bits (82), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%)

Query: 55  LSCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDS 111
           +S  + E G     ++ A+  A LD +  +I+P L++GKI++CD +    Y Y       
Sbjct: 22  ISAPLGELGDRHWILLIASWFAVLDSL--IIQPCLLQGKIIICDSWY---YKYLARFLLK 76

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           S  L   S   +S+    PD  I LD+P  I  KR +      ES  L+  E+ D + ++
Sbjct: 77  STELAKLSKSALSIN-TKPDMVIYLDVPPSIAEKR-KEILKPSESGKLEINEKYDFIEYQ 134

Query: 172 K----RRQIFLDIARNQPDRCHIVDS 193
           K    + Q F D      D   I+D+
Sbjct: 135 KHVLNQYQTFYD------DTWKIIDA 154


>gi|302895715|ref|XP_003046738.1| hypothetical protein NECHADRAFT_91240 [Nectria haematococca mpVI
           77-13-4]
 gi|256727665|gb|EEU41025.1| hypothetical protein NECHADRAFT_91240 [Nectria haematococca mpVI
           77-13-4]
          Length = 1157

 Score = 36.2 bits (82), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           +  G F++F G  G GK+T I+LL+RF       +++ + P
Sbjct: 927 IKKGQFVAFVGASGCGKSTMIALLERFYDPSTGSINIDKSP 967


>gi|297669947|ref|XP_002813145.1| PREDICTED: thymidylate kinase-like isoform 1 [Pongo abelii]
          Length = 212

 Score = 35.8 bits (81), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 15/201 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T    L   L    +   + R P  +          L    D   
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD-VE 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  ++ 
Sbjct: 65  DHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWCKQP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V    PD  + L L +    KR              +   ++    E+    F  + R+
Sbjct: 121 DVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENRAFQERALWCFHQLMRD 170

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
                 +VD++ S ++V  +I
Sbjct: 171 TTLNWKMVDASKSIEAVHEDI 191


>gi|260943900|ref|XP_002616248.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
 gi|238849897|gb|EEQ39361.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
          Length = 208

 Score = 35.8 bits (81), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ +GK+T    L   L     D  + + P   TP  +     L++   D  
Sbjct: 3   GRLILIEGLDRSGKSTQAENLASAL-----DAQLYKFPDRSTPVGKLINEYLVNSSFD-L 56

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             EA  ++F+A R + V + +   L+ G+ ++ DR++ S  AY
Sbjct: 57  SDEAAHLLFSANRWE-VAHEMEATLLRGQNIVLDRYIYSGIAY 98


>gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter
           ruminantium M1]
 gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter
           ruminantium M1]
          Length = 444

 Score = 35.8 bits (81), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFG-- 63
           I F G++G+GKTT I  L R+LQRK +   V       PAA E  + +     +  +G  
Sbjct: 102 ILFLGLQGSGKTTTIGKLCRYLQRKGFSPAVVCTDTWRPAAYEQLKQLTEEMQIQLYGDP 161

Query: 64  AEAEAIVFAAARLDHVEN 81
              +A+  A   L H +N
Sbjct: 162 DNKDALDLAEKGLKHFKN 179


>gi|255955699|ref|XP_002568602.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590313|emb|CAP96490.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 223

 Score = 35.8 bits (81), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 86/215 (40%), Gaps = 22/215 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ AGK++   +L+  L R+ + V   R P   TP  +     L   G    
Sbjct: 12  GALIVVEGLDRAGKSSQCEMLRDSLSRQGHVVKYIRFPDRTTPIGKLIDSYLR--GSSHQ 69

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +  ++F+A R + +   I   +  G  ++ DR+  S   Y   + ++  L L+    
Sbjct: 70  DDHSIHLLFSANRWE-IAKSIEEDIANGTTVIVDRYSYSGVVYSAAK-ANPTLSLEWAWR 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             +    PD  + L +  +   KR      RY   E             +  + R++F  
Sbjct: 128 PEIGLPRPDICLFLSISPEEAAKRGGFGAERYENGE-------------MQTRVRELFQT 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I   Q D   I+D+  S + V+  I  +V + + +
Sbjct: 175 IFEKQQD-VSIIDAGKSIEEVSQEIRGVVADCIAR 208


>gi|312200592|ref|YP_004020653.1| thymidylate kinase [Frankia sp. EuI1c]
 gi|311231928|gb|ADP84783.1| thymidylate kinase [Frankia sp. EuI1c]
          Length = 223

 Score = 35.8 bits (81), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 21/153 (13%)

Query: 5   LFISFEGIEGAGKTT-------HISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVL 54
           + ++ EGI+GAGK T        ++   R + R     YDV    EP G PA  A     
Sbjct: 1   MIVAIEGIDGAGKNTLTQALVAALTATGRPVSRLAFPRYDV----EPLG-PAVRAMLTGD 55

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
            +         A A++FA  R +    +   A  +  ++L DR++ S+ AY   R S+  
Sbjct: 56  QALAPVAASVRASALLFALDRANAGPELAAAAAGDA-VVLVDRYVASNAAYGAARLSAPE 114

Query: 115 L--FLDSLQEISVQEVM---PDCTIILDLPVDI 142
              F D +  I + ++    PD  I+L +PV++
Sbjct: 115 RPGFRDWVASIELTDLALPRPDLQILLRVPVEV 147


>gi|291415046|ref|XP_002723764.1| PREDICTED: thymidylate kinase isoform 1 [Oryctolagus cuniculus]
          Length = 212

 Score = 35.8 bits (81), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 23/205 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T    L   L+   +   + R P    + E  +  LLS  +++  
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFP--ERSTEIGK--LLSSYLEK-K 60

Query: 64  AEAE----AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E E     ++F+A R + V   I+  L +G  L+ DR+  S  A+     + ++  L+ 
Sbjct: 61  SEVEDHSVHLLFSANRWEQV-PFIKEKLSQGVTLVVDRYAFSGVAFT---SAKENFSLEW 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            ++  V    PD  + L L       ++    S  E  C  Y  R      E+  Q F  
Sbjct: 117 CKQPDVGLPRPDLVLFLQL-------KLAEAASRGEFGCERYESR---AFQERALQGFHQ 166

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           + R+      +VD++ S + V   I
Sbjct: 167 LMRDPSLNWKMVDASKSIEDVHEEI 191


>gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
 gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
          Length = 443

 Score = 35.8 bits (81), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 9/74 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64
           G++G+GKTT ++ L R+ Q++ Y V V    T  PG   A    + +L    ++ FG   
Sbjct: 107 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG---AYHQLKQLLDPYHIEVFGDPQ 163

Query: 65  EAEAIVFAAARLDH 78
           E +AI  A   + H
Sbjct: 164 EKDAIKLAREGVKH 177


>gi|119478380|ref|ZP_01618388.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143]
 gi|119448589|gb|EAW29835.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143]
          Length = 226

 Score = 35.8 bits (81), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 31/214 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEF 62
           FI+ EG  G GKTT   L ++     NY     +  + P      +  +H          
Sbjct: 20  FIAIEGAIGVGKTT---LARQLADTFNYQTLLENAEQNPFLERFYQNQKH---------- 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDS-L 120
            A A  + F   R   +E++ +  + E  + + D  +D    + Q   D+ +    D   
Sbjct: 67  AALATQLFFLFQRSQQIEDLRQGDIFE-PVRVSDFLIDKDKLFAQLNLDADEFQLYDKVF 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLD 179
           Q++++    PD  I L   VD+ L R+QNR     +    +Y E     I+E   + FL 
Sbjct: 126 QQLTIDAPKPDLVIYLQASVDVLLARIQNRGVEFEQRISRNYLES----INEAYSEFFL- 180

Query: 180 IARNQP------DRCHIVDSAHSFQSVATNILNI 207
              + P      D   +V+ ++ +  +   +LNI
Sbjct: 181 YYDDAPLLIVNADEMDVVNRSNDYTQLVDYLLNI 214


>gi|159122877|gb|EDP47997.1| ABC multidrug transporter, putative [Aspergillus fumigatus A1163]
          Length = 1274

 Score = 35.8 bits (81), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1047 IQSGQFVAFVGPSGCGKTTVISLLERF 1073


>gi|70982708|ref|XP_746882.1| ABC multidrug transporter [Aspergillus fumigatus Af293]
 gi|66844506|gb|EAL84844.1| ABC multidrug transporter, putative [Aspergillus fumigatus Af293]
          Length = 1274

 Score = 35.8 bits (81), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1047 IQSGQFVAFVGPSGCGKTTVISLLERF 1073


>gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|3334341|sp|O27376|SRP54_METTH RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 442

 Score = 35.8 bits (81), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           I F G++G+GKTT I  L R+L++K + V V       PAA
Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142


>gi|108803279|ref|YP_643216.1| hypothetical protein Rxyl_0430 [Rubrobacter xylanophilus DSM 9941]
 gi|108764522|gb|ABG03404.1| conserved hypothetical protein [Rubrobacter xylanophilus DSM 9941]
          Length = 680

 Score = 35.4 bits (80), Expect = 5.1,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%)

Query: 23  LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV 82
           L +R L R + +V + R+P G PA  AA   L   G    G E +    AA R  H+E  
Sbjct: 377 LARRLLSRGSLEVAIYRDPAGRPAGFAASLRLRRAG----GEERDPAALAALR--HLEG- 429

Query: 83  IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIIL 136
            R  L  G+     RF  +  +YQ    + + + LD++    +    P CT+++
Sbjct: 430 -RGPLRTGEEAALLRFWMARSSYQSG-PALRGILLDAVLRHVLDAPPPACTLLV 481


>gi|312067737|ref|XP_003136884.1| thymidylate kinase [Loa loa]
 gi|307767957|gb|EFO27191.1| thymidylate kinase [Loa loa]
          Length = 213

 Score = 35.4 bits (80), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 17/209 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG +  GK+     L   ++    +V +   P  +          L   V+   
Sbjct: 7   GAFIVFEGCDRVGKSLQSRKLVERIKATGGNVDLISFPDRSSDLGKFIDRYLKKEVEMEP 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EA  +VFAA R   +  +++  L++G  L+ DR+  S  AY   +  + ++ ++  +  
Sbjct: 67  KEAH-LVFAANRQALMPLMVKE-LLKGTHLVVDRYAYSGIAYTLAK-GADNVTMEWAKLA 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + E+ PDC I  +L  +   KR        +S     F+ K   I EK       +A  
Sbjct: 124 DMGELKPDCVIYFNLSFEEAQKRSGFGDERFDSGS---FQGKVNDIMEK-------LAAE 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             D   +VD++   + ++ N    VW+LV
Sbjct: 174 DRDLWKVVDASLPIEVISEN----VWKLV 198


>gi|268323396|emb|CBH36984.1| thymidylate kinase [uncultured archaeon]
          Length = 204

 Score = 35.4 bits (80), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GK T   LLK+ L +K + V     P             L   ++   +
Sbjct: 1   MLINFEGIDGSGKRTQSKLLKKELLKKGFKVADFSYPDYDSEYGKLIKGFLEAKLN-LSS 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + + +++    + + E VI+  L +G +++ DR+  S+ AYQ    S+ +   +  + ++
Sbjct: 60  DEQFLLYLIDIVKNKEEVIQ-KLRKGHVVIMDRYFLSTIAYQ----SANNFDYEVAKAVT 114

Query: 125 --VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
             +Q  +P     +++P+DI  +R       ++   +D FE
Sbjct: 115 KLIQLPLPSVIFYIEIPLDIASRRKS-----KQKGIVDRFE 150


>gi|146078976|ref|XP_001463654.1| thymidylate kinase-like protein [Leishmania infantum JPCM5]
 gi|134067741|emb|CAM66020.1| thymidylate kinase-like protein [Leishmania infantum JPCM5]
 gi|322497056|emb|CBZ32126.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 363

 Score = 35.4 bits (80), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 12/197 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CG 58
           +S   I  EG +GAGK T   LL R +     +VH    P            +LS     
Sbjct: 136 SSAEVIVIEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGRKGS 195

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116
           + E   +  + +++  R       +   L  G  ++ DR+  +++ +Q  +     +  F
Sbjct: 196 ISELNPQLFSFLYSLNRFGCARQ-LHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAF 254

Query: 117 LDSLQEISVQEV-MPDCTII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +  L+ + V+ + +P  T +  LDLP    L+ ++ R S R+   LD  E       E+ 
Sbjct: 255 ISDLEFMEVEWLGLPRATYVLYLDLPPAAALEAMR-RDSTRKQ--LDIHETAGSDYKERV 311

Query: 174 RQIFLDIARNQPDRCHI 190
           RQ +     + P   HI
Sbjct: 312 RQTYRWCCEHLPGWHHI 328


>gi|219886119|gb|ACL53434.1| unknown [Zea mays]
          Length = 255

 Score = 35.4 bits (80), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 10/137 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ +GKT+  + L  FL+ K Y+    R P     A +   ++ S   ++  
Sbjct: 53  GALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFP---DRATSVGQMISSYLANDSQ 109

Query: 64  AEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            +   I  +F+A R +    ++   L+ G  L+ DR+  S  A+     +++ L ++  +
Sbjct: 110 LDDRTIHLLFSANRWEK-RALMESKLLSGTTLIVDRYSYSGVAF----SAAKGLDIEWCK 164

Query: 122 EISVQEVMPDCTIILDL 138
                 + PD  I LD+
Sbjct: 165 APENGLIAPDLVIYLDV 181


>gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter
           marburgensis str. Marburg]
          Length = 442

 Score = 35.4 bits (80), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           I F G++G+GKTT I  L R+L++K + V V       PAA
Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142


>gi|303319671|ref|XP_003069835.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240109521|gb|EER27690.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320034114|gb|EFW16059.1| thymidylate kinase [Coccidioides posadasii str. Silveira]
          Length = 228

 Score = 35.4 bits (80), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ AGK+T  ++L   L+ K ++    R P  T +        L  G  
Sbjct: 14  MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLR-GET 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A  ++F+A R + + + IR  +  G  ++ DR+  S   Y   ++ ++ L L+  
Sbjct: 73  QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAKN-NRELSLEWA 130

Query: 121 QEISVQEVMPDCTIILDLPVD-------IGLKRVQN 149
            +  +    PD    L++  +        GL+R +N
Sbjct: 131 WQSEIGLPRPDLWFFLNISPEKAESRGGYGLERYEN 166


>gi|119183198|ref|XP_001242660.1| hypothetical protein CIMG_06556 [Coccidioides immitis RS]
          Length = 228

 Score = 35.4 bits (80), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ AGK+T  ++L   L+ K ++    R P  T +        L  G  
Sbjct: 14  MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLR-GET 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A  ++F+A R + + + IR  +  G  ++ DR+  S   Y   ++ ++ L L+  
Sbjct: 73  QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAKN-NRELSLEWA 130

Query: 121 QEISVQEVMPDCTIILDLPVD-------IGLKRVQN 149
            +  +    PD    L++  +        GL+R +N
Sbjct: 131 WQPEIGLPRPDLWFFLNISPEEAESRGGYGLERYEN 166


>gi|237751787|ref|ZP_04582267.1| thymidylate kinase [Helicobacter bilis ATCC 43879]
 gi|229373153|gb|EEO23544.1| thymidylate kinase [Helicobacter bilis ATCC 43879]
          Length = 214

 Score = 35.4 bits (80), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 36/173 (20%)

Query: 10  EGIEGAGKTTHISLLKR---FLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60
           EGI+ +GKTT  +L+K+    +  +NY       + V  EPG T      R +LL     
Sbjct: 7   EGIDTSGKTTQCNLIKQNYPCVSLENYKDSIKDSIIVLNEPGSTYLGNLVRKILLDSQT- 65

Query: 61  EFGAEAEAIVFAAAR------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +   ++  ++F A R      L ++ N I          + DR L S  AY    D  + 
Sbjct: 66  QINEKSSFLLFLAQRAELFLQLKNISNTI----------IADRSLISGVAYARAIDMREA 115

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           L   +L   +   ++P   + L+   D    R+        +  LD  E+K +
Sbjct: 116 L---NLNLFATGGILPQKIVFLETSKDTLKSRLN-------AKSLDNIEQKGI 158


>gi|195121060|ref|XP_002005039.1| GI19275 [Drosophila mojavensis]
 gi|193910107|gb|EDW08974.1| GI19275 [Drosophila mojavensis]
          Length = 211

 Score = 35.4 bits (80), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI FEG +  GK+T  + L   L+ K         P  +       +  L     E  
Sbjct: 7   GAFIVFEGCDRVGKSTQSNQLCERLKEKGIAAKKINFPNRSTIIGDVINRFLK-NTQELS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
            E   ++F+A R + + + I+  L+ G  ++CDR     YAY G
Sbjct: 66  HEVIHLLFSANRWECMSS-IQADLLAGTTIICDR-----YAYSG 103


>gi|119488269|ref|XP_001262673.1| ABC multidrug transporter, putative [Neosartorya fischeri NRRL 181]
 gi|119410831|gb|EAW20776.1| ABC multidrug transporter, putative [Neosartorya fischeri NRRL 181]
          Length = 1297

 Score = 35.4 bits (80), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1070 IQSGQFVAFVGPSGCGKTTVISLLERF 1096


>gi|157116910|ref|XP_001652904.1| Thymidylate kinase, putative [Aedes aegypti]
 gi|108883432|gb|EAT47657.1| Thymidylate kinase, putative [Aedes aegypti]
          Length = 249

 Score = 35.4 bits (80), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 9/155 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG + AGKTT    +   L    +       P  +    A  +  L+   D F 
Sbjct: 47  GALIVLEGCDRAGKTTQCKRIVESLNSAGHKAKFMNFPDRSTQFGALINSYLT-SKDNFT 105

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EA  ++F   R +  +N +   L  G  L+ DR+  S  A+     +++ L +D  +  
Sbjct: 106 DEAIHLLFTLNRWE-AKNEMERLLRSGVTLIVDRYSYSGVAFS----AAKGLNMDWCKAP 160

Query: 124 SVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRE 155
                 PD  ++L L  +   KR    Q RY + E
Sbjct: 161 ETGLPKPDLVLLLTLTAEAMAKRGGFGQERYEVPE 195


>gi|297793501|ref|XP_002864635.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310470|gb|EFH40894.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 263

 Score = 35.4 bits (80), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 6/135 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ +GK+T  + L  FL+   +   + R P    +        LS    +  
Sbjct: 59  GALIVLEGLDRSGKSTQCAKLLSFLEGLGHPTELWRFPDRETSVGQMISAYLS-NKSQLD 117

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R +   +++   L  G  L+ DR+  S  A+     S++ L +D  +  
Sbjct: 118 DHTIHLLFSANRWEK-RSLMEEKLKTGTTLIVDRYSYSGVAF----SSAKGLNIDWCKAP 172

Query: 124 SVQEVMPDCTIILDL 138
            +  + PD  + LD+
Sbjct: 173 EIGLLAPDSVLYLDI 187


>gi|238507367|ref|XP_002384885.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357]
 gi|220689598|gb|EED45949.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357]
          Length = 1314

 Score = 35.4 bits (80), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1075 IKSGQFVAFVGPSGCGKTTVISLLERF 1101


>gi|329896234|ref|ZP_08271412.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088]
 gi|328921905|gb|EGG29272.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088]
          Length = 224

 Score = 35.4 bits (80), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 13/147 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG+ G GKTT    L +  Q +      T  P  T   E  R   L+  +      
Sbjct: 17  FIAIEGVIGVGKTTLARRLAQTFQYQTILEDPTANPFLTKFYEDMRQHALATQLSFLFQR 76

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123
            +AI             +R + +   + + D  L  D  +A          L+    Q++
Sbjct: 77  TQAI-----------QALRQSDIFAPLHVADFMLQKDPLFARLTLNSEEYELYDKVYQQM 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +V    PD  I L  P D+ L R++ R
Sbjct: 126 TVDVPRPDLVIYLQAPTDVLLSRIERR 152


>gi|134080107|emb|CAK46088.1| unnamed protein product [Aspergillus niger]
          Length = 1319

 Score = 35.4 bits (80), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1092 IESGQFVAFVGPSGCGKTTVISLLERF 1118


>gi|242046716|ref|XP_002461104.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
 gi|241924481|gb|EER97625.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
          Length = 254

 Score = 35.0 bits (79), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 10/137 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +  EG++ +GK++  + L  FL+ K YD    R P     A +   ++ +   +E  
Sbjct: 52  GALVVLEGLDRSGKSSQCARLLSFLKGKGYDAEGWRFP---DRATSVGQMISAYLANESQ 108

Query: 64  AEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            +   I  +F+A R +    ++   L+ G  L+ DR+  S  A+     +++ L ++  +
Sbjct: 109 LDDRTIHLLFSANRWEK-RALMESKLLSGTTLVVDRYSYSGVAF----SAAKGLDIEWCK 163

Query: 122 EISVQEVMPDCTIILDL 138
                 + PD  I LD+
Sbjct: 164 APENGLIAPDLVIYLDV 180


>gi|222111640|ref|YP_002553904.1| ABC transporter-like protein [Acidovorax ebreus TPSY]
 gi|221731084|gb|ACM33904.1| ABC transporter related [Acidovorax ebreus TPSY]
          Length = 256

 Score = 35.0 bits (79), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 32/137 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH-----VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGKTT  +LL +FL+  +  +H     +TRE    PA  A R V+ S  +      
Sbjct: 38  GPNGAGKTTCFNLLTKFLEPTSGTIHFNGHDITRE---QPAQIARRGVIRSFQI------ 88

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQ--HLFLDSLQE 122
                  +A   H+       LME   L   R L +SY + + ER  SQ     +  L E
Sbjct: 89  -------SAVFPHL------TLMENVRLGLQRKLGTSYHFWRSERSLSQLNDRAVQLLTE 135

Query: 123 ISVQEVMPDCTIILDLP 139
           + +QE+  + T+  +LP
Sbjct: 136 VGLQELADEVTV--NLP 150


>gi|317033746|ref|XP_001395392.2| lipid A export ATP-binding/permease protein msbA [Aspergillus niger
            CBS 513.88]
          Length = 1291

 Score = 35.0 bits (79), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1064 IESGQFVAFVGPSGCGKTTVISLLERF 1090


>gi|60831889|gb|AAX36988.1| deoxythymidylate kinase [synthetic construct]
          Length = 213

 Score = 35.0 bits (79), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G  I  EG++ AGK+T    L   L    +   + R P    + E  +  LLS  +    
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  
Sbjct: 62  DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR              +   ++    E+  + F  +
Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
            ++      +VD++ S ++V  +I
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDI 191


>gi|328874643|gb|EGG23008.1| signal recognition particle 54 kDa subunit [Dictyostelium
           fasciculatum]
          Length = 502

 Score = 35.0 bits (79), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDE 61
            I F G++GAGKTT ++ L  F +RK ++  +    T   G   A    +H      +  
Sbjct: 103 IIMFVGLQGAGKTTSVTKLAHFYKRKGWNTAMVCADTFRAG---AFAQLQHNATKAKIPF 159

Query: 62  FGAEAEAIVFAAAR 75
           +G+E+E    AAA+
Sbjct: 160 YGSESEKDPVAAAK 173


>gi|83776389|dbj|BAE66508.1| unnamed protein product [Aspergillus oryzae]
          Length = 1189

 Score = 35.0 bits (79), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           + SG F++F G  G GKTT ISLL+RF
Sbjct: 962 IESGQFVAFVGPSGCGKTTVISLLERF 988


>gi|42544174|ref|NP_036277.2| thymidylate kinase isoform 1 [Homo sapiens]
 gi|114584335|ref|XP_001161768.1| PREDICTED: deoxythymidylate kinase (thymidylate kinase) isoform 3
           [Pan troglodytes]
 gi|56405325|sp|P23919|KTHY_HUMAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12804775|gb|AAH01827.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
 gi|49456983|emb|CAG46812.1| DTYMK [Homo sapiens]
 gi|62822371|gb|AAY14920.1| unknown [Homo sapiens]
 gi|119591690|gb|EAW71284.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_b [Homo
           sapiens]
 gi|187955102|gb|AAI47007.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
 gi|187955947|gb|AAI47011.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
          Length = 212

 Score = 35.0 bits (79), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G  I  EG++ AGK+T    L   L    +   + R P    + E  +  LLS  +    
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  
Sbjct: 62  DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR              +   ++    E+  + F  +
Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
            ++      +VD++ S ++V  +I
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDI 191


>gi|33303857|gb|AAQ02442.1| deoxythymidylate kinase [synthetic construct]
 gi|54696972|gb|AAV38858.1| deoxythymidylate kinase (thymidylate kinase) [synthetic construct]
          Length = 213

 Score = 35.0 bits (79), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G  I  EG++ AGK+T    L   L    +   + R P    + E  +  LLS  +    
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  
Sbjct: 62  DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR              +   ++    E+  + F  +
Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
            ++      +VD++ S ++V  +I
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDI 191


>gi|317159234|ref|XP_001827641.2| lipid A export ATP-binding/permease protein msbA [Aspergillus oryzae
            RIB40]
          Length = 1310

 Score = 35.0 bits (79), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1083 IESGQFVAFVGPSGCGKTTVISLLERF 1109


>gi|14488796|pdb|1E2D|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
           Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
 gi|14488797|pdb|1E2E|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
           Monophosphate, Adenosine Diphosphate,A Magnesium-Ion And
           Alf3
 gi|14488798|pdb|1E2F|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
           Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
 gi|14488799|pdb|1E2G|A Chain A, Human Thymidylate Kinase Complexed With Adp, Tdp And A
           Magnesium-Ion
 gi|14488800|pdb|1E2Q|A Chain A, Human Thymidylate Kinase Complexed With Tp5a And A
           Magnesium-Ion
 gi|16975361|pdb|1E99|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Adp
 gi|16975362|pdb|1E9A|A Chain A, Human Thymidylate Kinase Complexed With The Bisubstrate
           Inhibitor Aztp5a
 gi|16975363|pdb|1E9B|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Appnp
 gi|29726714|pdb|1NMX|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
           And Adp
 gi|29726716|pdb|1NMZ|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Nh2tmp
           And Appnhp
 gi|29726717|pdb|1NN0|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
           And Adp
 gi|29726718|pdb|1NN1|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
           And Appnhp
 gi|29726719|pdb|1NN3|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
           Adp
 gi|29726720|pdb|1NN5|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
           Appnhp
          Length = 215

 Score = 35.0 bits (79), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G  I  EG++ AGK+T    L   L    +   + R P    + E  +  LLS  +    
Sbjct: 9   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  
Sbjct: 65  DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWC 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR              +   ++    E+  + F  +
Sbjct: 121 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
            ++      +VD++ S ++V  +I
Sbjct: 171 MKDTTLNWKMVDASKSIEAVHEDI 194


>gi|241758681|ref|ZP_04756795.1| deoxyguanosine kinase [Neisseria flavescens SK114]
 gi|241321192|gb|EER57388.1| deoxyguanosine kinase [Neisseria flavescens SK114]
          Length = 211

 Score = 35.0 bits (79), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G+GKT     L R L      + ++  P   P       +     V   G  
Sbjct: 5   YIVVEGAIGSGKTA----LSRRLAEHFSALLLSENPDHNPFL-----MKFYSNVSNNGLA 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
           AE + F   R + V N+I     +G +++ D FL   D  +      D  Q LF D  Q 
Sbjct: 56  AE-LFFLTRRAESV-NIIDDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFADMKQR 112

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           I  Q   PD  I L   V+   KR+Q R+
Sbjct: 113 ILPQYAEPDVVIYLQTAVENNRKRLQKRH 141


>gi|261379860|ref|ZP_05984433.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703]
 gi|284797557|gb|EFC52904.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703]
          Length = 211

 Score = 35.0 bits (79), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G+GKT     L R L      + ++  P   P       +     V   G  
Sbjct: 5   YIVVEGAIGSGKTA----LSRRLAEHFSALLLSENPDHNPFL-----MKFYSNVSNNGLA 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
           AE + F   R + V N+I     +G +++ D FL   D  +      D  Q LF D  Q 
Sbjct: 56  AE-LFFLMRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFADMKQR 112

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           I  Q   PD  I L   V+   KR+Q R+
Sbjct: 113 ILPQYAEPDVVIYLQTAVENNRKRLQKRH 141


>gi|161407223|ref|YP_638514.2| thymidylate kinase [Mycobacterium sp. MCS]
          Length = 210

 Score = 35.0 bits (79), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 19/175 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEA--ARHVLLS 56
           + I+ EG++GAGK T  + ++   +     V     P          AAEA   RH  L+
Sbjct: 1   MLIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLA 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DS 111
             V      A A++FA  R D  + +   A     +++ DR++ S+ AY   R     D 
Sbjct: 61  ESV-----YAMAVLFALDRADARDEIAHLAAAH-DVVILDRYVASNAAYSAARLHQSADG 114

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
               ++ SL+   +     D  I+LD+P  +  +R + R         D +ER D
Sbjct: 115 EAVEWVRSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYERDD 169


>gi|29726715|pdb|1NMY|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
           And Appnhp
          Length = 209

 Score = 35.0 bits (79), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60
           G  I  EG++ AGK+T    L   L    +   + R P    + E  +  LLS  +    
Sbjct: 3   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G   + ++  LD  
Sbjct: 59  DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR              +   ++    E+  + F  +
Sbjct: 115 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204
            ++      +VD++ S ++V  +I
Sbjct: 165 MKDTTLNWKMVDASKSIEAVHEDI 188


>gi|215428729|ref|ZP_03426648.1| thymidylate kinase [Mycobacterium tuberculosis T92]
 gi|289751941|ref|ZP_06511319.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92]
 gi|289692528|gb|EFD59957.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92]
          Length = 214

 Score = 35.0 bits (79), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 12/186 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T +  L    +     V     P  G + AA+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQHLFLD 118
               A A +FA  R   V  +    L  G  +++ DR++ S+ AY   R  +++      
Sbjct: 61  SSVYAMATLFALDRAGAVHTI--QGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAA 118

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +Q I    +    PD  ++L +  ++  +R + R         D +ER D  + ++   
Sbjct: 119 WVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGA 177

Query: 176 IFLDIA 181
           ++ ++A
Sbjct: 178 VYAELA 183


>gi|119591691|gb|EAW71285.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_c [Homo
           sapiens]
          Length = 254

 Score = 35.0 bits (79), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 15/201 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++ AGK+T    L   L    +   + R P  +          L    D   
Sbjct: 6   GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD-VE 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  ++ 
Sbjct: 65  DHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCKQP 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V    PD  + L L +    KR    +   E+              E+  + F  + ++
Sbjct: 121 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAF----------QERALRCFHQLMKD 170

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
                 +VD++ S ++V  +I
Sbjct: 171 TTLNWKMVDASKSIEAVHEDI 191


>gi|299745593|ref|XP_001831821.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
 gi|298406658|gb|EAU90004.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
          Length = 237

 Score = 35.0 bits (79), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 12/143 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG++ +GKTT  +LL+  L+ +      + + P  T          L     E   
Sbjct: 11  FIVIEGLDRSGKTTQTALLQSRLESELGASTKLMKFPDRTTTIGQMIDSYLKSD-SELDD 69

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---------QGERDSSQHL 115
               ++F+A R +    + R  L EG ++LCDR+  S  A+          G  +S   L
Sbjct: 70  HVIHLLFSANRWELASTIER-LLNEGTVVLCDRYAFSGIAFSASKVVPERSGSGESVPKL 128

Query: 116 FLDSLQEISVQEVMPDCTIILDL 138
             +  +   +    PD  + LD+
Sbjct: 129 PFEWCRAPDIGLPAPDLVLFLDI 151


>gi|15610383|ref|NP_217764.1| thymidylate kinase [Mycobacterium tuberculosis H37Rv]
 gi|15842836|ref|NP_337873.1| thymidylate kinase [Mycobacterium tuberculosis CDC1551]
 gi|31794427|ref|NP_856920.1| thymidylate kinase [Mycobacterium bovis AF2122/97]
 gi|121639136|ref|YP_979360.1| thymidylate kinase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663110|ref|YP_001284633.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|148824449|ref|YP_001289203.1| thymidylate kinase [Mycobacterium tuberculosis F11]
 gi|167966685|ref|ZP_02548962.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|215405259|ref|ZP_03417440.1| thymidylate kinase [Mycobacterium tuberculosis 02_1987]
 gi|215413125|ref|ZP_03421826.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A]
 gi|215432211|ref|ZP_03430130.1| thymidylate kinase [Mycobacterium tuberculosis EAS054]
 gi|215447550|ref|ZP_03434302.1| thymidylate kinase [Mycobacterium tuberculosis T85]
 gi|218755033|ref|ZP_03533829.1| thymidylate kinase [Mycobacterium tuberculosis GM 1503]
 gi|219559306|ref|ZP_03538382.1| thymidylate kinase [Mycobacterium tuberculosis T17]
 gi|224991629|ref|YP_002646318.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800289|ref|YP_003033290.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435]
 gi|254365871|ref|ZP_04981916.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem]
 gi|254552350|ref|ZP_05142797.1| thymidylate kinase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188295|ref|ZP_05765769.1| thymidylate kinase [Mycobacterium tuberculosis CPHL_A]
 gi|260202408|ref|ZP_05769899.1| thymidylate kinase [Mycobacterium tuberculosis T46]
 gi|260206598|ref|ZP_05774089.1| thymidylate kinase [Mycobacterium tuberculosis K85]
 gi|289444828|ref|ZP_06434572.1| thymidylate kinase [Mycobacterium tuberculosis T46]
 gi|289448935|ref|ZP_06438679.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A]
 gi|289555525|ref|ZP_06444735.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605]
 gi|289571474|ref|ZP_06451701.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17]
 gi|289575967|ref|ZP_06456194.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85]
 gi|289747065|ref|ZP_06506443.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987]
 gi|289755370|ref|ZP_06514748.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054]
 gi|289759387|ref|ZP_06518765.1| thymidylate kinase [Mycobacterium tuberculosis T85]
 gi|289763435|ref|ZP_06522813.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503]
 gi|294993813|ref|ZP_06799504.1| thymidylate kinase [Mycobacterium tuberculosis 210]
 gi|297635900|ref|ZP_06953680.1| thymidylate kinase [Mycobacterium tuberculosis KZN 4207]
 gi|297732897|ref|ZP_06962015.1| thymidylate kinase [Mycobacterium tuberculosis KZN R506]
 gi|298526723|ref|ZP_07014132.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777576|ref|ZP_07415913.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001]
 gi|306782297|ref|ZP_07420634.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002]
 gi|306786119|ref|ZP_07424441.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003]
 gi|306790487|ref|ZP_07428809.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004]
 gi|306795008|ref|ZP_07433310.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005]
 gi|306799206|ref|ZP_07437508.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006]
 gi|306805054|ref|ZP_07441722.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008]
 gi|306809240|ref|ZP_07445908.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007]
 gi|306969343|ref|ZP_07482004.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009]
 gi|306973695|ref|ZP_07486356.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010]
 gi|307081404|ref|ZP_07490574.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011]
 gi|307086008|ref|ZP_07495121.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012]
 gi|313660229|ref|ZP_07817109.1| thymidylate kinase [Mycobacterium tuberculosis KZN V2475]
 gi|61213172|sp|O05891|KTHY_MYCTU RecName: Full=Thymidylate kinase; AltName: Full=Thymidine
           monophosphate kinase; AltName: Full=dTMP kinase;
           Short=TMPK
 gi|16975072|pdb|1G3U|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Tmp)
 gi|20149891|pdb|1GSI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Tmp)
 gi|20149899|pdb|1GTV|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With
           Thymidine-5'-Diphosphate (Tdp)
 gi|20149900|pdb|1GTV|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With
           Thymidine-5'-Diphosphate (Tdp)
 gi|28373781|pdb|1MRN|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Bisubstrate Inhibitor
           (Tp5a)
 gi|28373782|pdb|1MRS|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With 5-Ch2oh Deoxyuridine
           Monophosphate
 gi|30749563|pdb|1N5I|A Chain A, Crystal Structure Of Inactive Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Tmp) At Ph 4.6 (Resolution 1.85 A)
 gi|30749564|pdb|1N5J|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine Diphosphate
           (Tdp) And Thymidine Triphosphate (Ttp) At Ph 5.4 (1.85 A
           Resolution)
 gi|30749565|pdb|1N5K|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate
           (Resolution 2.1 A)
 gi|30749566|pdb|1N5K|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate
           (Resolution 2.1 A)
 gi|30749567|pdb|1N5L|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate,
           After Catalysis In The Crystal (2.3 A Resolution)
 gi|30749568|pdb|1N5L|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate,
           After Catalysis In The Crystal (2.3 A Resolution)
 gi|60593791|pdb|1W2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Deoxythymidine (Dt)
           (2.1 A Resolution)
 gi|60593792|pdb|1W2G|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Deoxythymidine (Dt)
           (2.1 A Resolution)
 gi|60593793|pdb|1W2H|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Azidothymidine
           Monophosphate (Azt- Mp) (2.0 A Resolution)
 gi|60593794|pdb|1W2H|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Azidothymidine
           Monophosphate (Azt- Mp) (2.0 A Resolution)
 gi|2072714|emb|CAB08348.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID
           KINASE) (TMPK) [Mycobacterium tuberculosis H37Rv]
 gi|13883165|gb|AAK47687.1| thymidylate kinase, putative [Mycobacterium tuberculosis CDC1551]
 gi|31620023|emb|CAD95367.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID
           KINASE) (TMPK) [Mycobacterium bovis AF2122/97]
 gi|121494784|emb|CAL73265.1| Probable thymidylate kinase tmk [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134151384|gb|EBA43429.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem]
 gi|148507262|gb|ABQ75071.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|148722976|gb|ABR07601.1| thymidylate kinase tmk [Mycobacterium tuberculosis F11]
 gi|224774744|dbj|BAH27550.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321792|gb|ACT26395.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435]
 gi|289417747|gb|EFD14987.1| thymidylate kinase [Mycobacterium tuberculosis T46]
 gi|289421893|gb|EFD19094.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A]
 gi|289440157|gb|EFD22650.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605]
 gi|289540398|gb|EFD44976.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85]
 gi|289545228|gb|EFD48876.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17]
 gi|289687593|gb|EFD55081.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987]
 gi|289695957|gb|EFD63386.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054]
 gi|289710941|gb|EFD74957.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503]
 gi|289714951|gb|EFD78963.1| thymidylate kinase [Mycobacterium tuberculosis T85]
 gi|298496517|gb|EFI31811.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214118|gb|EFO73517.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001]
 gi|308325048|gb|EFP13899.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002]
 gi|308329269|gb|EFP18120.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003]
 gi|308333100|gb|EFP21951.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004]
 gi|308336787|gb|EFP25638.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005]
 gi|308340621|gb|EFP29472.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006]
 gi|308344562|gb|EFP33413.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007]
 gi|308348358|gb|EFP37209.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008]
 gi|308353195|gb|EFP42046.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009]
 gi|308356935|gb|EFP45786.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010]
 gi|308360936|gb|EFP49787.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011]
 gi|308364475|gb|EFP53326.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012]
 gi|323718116|gb|EGB27298.1| thymidylate kinase tmk [Mycobacterium tuberculosis CDC1551A]
 gi|326902525|gb|EGE49458.1| thymidylate kinase tmk [Mycobacterium tuberculosis W-148]
 gi|328460024|gb|AEB05447.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 4207]
          Length = 214

 Score = 35.0 bits (79), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 12/186 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T +  L    +     V     P  G + AA+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQHLFLD 118
               A A +FA  R   V  +    L  G  +++ DR++ S+ AY   R  +++      
Sbjct: 61  SSVYAMATLFALDRAGAVHTI--QGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAA 118

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +Q I    +    PD  ++L +  ++  +R + R         D +ER D  + ++   
Sbjct: 119 WVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGA 177

Query: 176 IFLDIA 181
           ++ ++A
Sbjct: 178 VYAELA 183


>gi|119572686|gb|EAW52301.1| zinc finger protein 92 (HTF12) [Homo sapiens]
          Length = 607

 Score = 35.0 bits (79), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER---KDVMIHEKRRQIFLD 179
           + V +++P   ++      +  + V+  +SL E  CLD  +R   +DVM+   R  +FL 
Sbjct: 6   LQVLDLLPVGVVVAGKQGPLTFRDVKIEFSLEEWQCLDTAQRNLYRDVMLENYRNLVFLG 65

Query: 180 IARNQPD 186
           IA ++PD
Sbjct: 66  IAVSKPD 72


>gi|145242644|ref|XP_001393895.1| thymidylate kinase [Aspergillus niger CBS 513.88]
 gi|134078448|emb|CAK40391.1| unnamed protein product [Aspergillus niger]
          Length = 224

 Score = 35.0 bits (79), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 22/206 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62
           G  I  EG++ AGK++    L + LQ   + V   R P   TP  +     L   G  + 
Sbjct: 11  GALIVVEGLDRAGKSSQCESLHQKLQDLGHSVKYIRFPDRTTPIGKLIDGYLR--GQSQL 68

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +  ++F+A R + +   I   +  G  ++ DR+  S   Y   + ++  L L+    
Sbjct: 69  DDHSIHLLFSANRWE-IARAIEEDIAAGITVIVDRYSYSGAVYSAAK-ANPTLSLEWAWT 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             +    PD  + L +  D   KR      RY             ++  +  + R++F  
Sbjct: 127 PEIGLPQPDLCLFLSIAPDEAAKRGGFGAERY-------------ENETMQSRVRELFQT 173

Query: 180 IARNQ-PDRCHIVDSAHSFQSVATNI 204
           I R Q      ++D+  SF++V+ +I
Sbjct: 174 IFRVQRSGDIRVIDAGRSFEAVSVDI 199


>gi|326925772|ref|XP_003209083.1| PREDICTED: thymidylate kinase-like isoform 1 [Meleagris gallopavo]
          Length = 212

 Score = 34.7 bits (78), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 7/136 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EF 62
           G  I  EG++ AGK+T    L + LQ   +   + R P  T   E  R +      + E 
Sbjct: 6   GALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERT--TEIGRLIGAYLSREREL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +HV + ++  L +G  L+ DR+  S  A+     + ++  L+  ++
Sbjct: 64  EDHVVHLLFSANRWEHVTS-MKEKLHQGITLVVDRYAFSGVAFT---SAKENFCLEWCKQ 119

Query: 123 ISVQEVMPDCTIILDL 138
             V    PD  + L L
Sbjct: 120 PDVGLPKPDLILFLQL 135


>gi|297680323|ref|XP_002817949.1| PREDICTED: zinc finger protein 92-like isoform 1 [Pongo abelii]
          Length = 607

 Score = 34.7 bits (78), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER---KDVMIHEKRRQIFLD 179
           + V +++P   ++      +  + V+  +SL E  CLD  +R   +DVM+   R  +FL 
Sbjct: 6   LQVLDLLPVGVVVAGKQGPLTFRDVKIEFSLEEWQCLDTAQRNLYRDVMLENYRNLVFLG 65

Query: 180 IARNQPD 186
           IA ++PD
Sbjct: 66  IAVSKPD 72


>gi|322489068|emb|CBZ24317.1| thymidylate kinase-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 362

 Score = 34.7 bits (78), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 12/192 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63
           I  EG +GAGK T   LL R +     +VH    P            LLS     + E  
Sbjct: 140 IVIEGGDGAGKETQTGLLVRRVHAAGDEVHSLDFPNEKALYGGLVRALLSGKKGSISELD 199

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
            +  + +++  R       +   L  G  ++ DR+  +++ +Q  +     +  F+  L+
Sbjct: 200 PQLFSFLYSLNRFGCARQ-LHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 258

Query: 122 EISVQEV-MPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + V+ + +P  T  + LDLP    L+ ++   + ++   LD  E       E+ RQ + 
Sbjct: 259 FMEVEWLGLPRATSVLYLDLPPAAALEAMRRDAARKQ---LDIHETAGSDYKERVRQTYR 315

Query: 179 DIARNQPDRCHI 190
               + P   HI
Sbjct: 316 WCCEHLPGWHHI 327


>gi|302685608|ref|XP_003032484.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
 gi|300106178|gb|EFI97581.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
          Length = 282

 Score = 34.7 bits (78), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI  EG++ +GK+T  + LK  L      V + + P  T A        L   + E  
Sbjct: 5   GAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNI-EMD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
                ++++A R + + + I   L EG  ++CDR+  S  A+   +
Sbjct: 64  DHVVHLLYSANRWE-LASRISTLLSEGTTIICDRYAFSGIAFSASK 108


Searching..................................................done


Results from round 2




>gi|254780218|ref|YP_003064631.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039895|gb|ACT56691.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 225

 Score =  324 bits (831), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 225/225 (100%), Positives = 225/225 (100%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD
Sbjct: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL
Sbjct: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI
Sbjct: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI
Sbjct: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225


>gi|315122339|ref|YP_004062828.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495741|gb|ADR52340.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 227

 Score =  295 bits (755), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 163/224 (72%), Positives = 195/224 (87%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNSGLFISFEGIEG GKTTHIS L  FL++ NYDV +TREPGGTP AEAARHVLL+ GVD
Sbjct: 1   MNSGLFISFEGIEGVGKTTHISHLAGFLKKNNYDVQITREPGGTPVAEAARHVLLTGGVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           EFGA AE+I+F++ RLDHVENVIRPAL+EGKILLCDRFLDSSYAYQGE+D  +  FLDSL
Sbjct: 61  EFGAYAESILFSSIRLDHVENVIRPALIEGKILLCDRFLDSSYAYQGEKDDFKKTFLDSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q++S Q ++PDCTIILDLPVD+GL+R+++RYSL++++ LDYFERKD ++HEKRR+IFLDI
Sbjct: 121 QQVSTQGIVPDCTIILDLPVDVGLQRIRHRYSLKKNSSLDYFERKDWIVHEKRRRIFLDI 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           AR+QP+RC IVD+ H FQ VA +ILNIVWEL+QKR  P   K D
Sbjct: 181 ARDQPERCRIVDATHPFQDVAAHILNIVWELMQKRSFPRPPKGD 224


>gi|77919289|ref|YP_357104.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380]
 gi|123574092|sp|Q3A3X3|KTHY_PELCD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77545372|gb|ABA88934.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380]
          Length = 216

 Score =  282 bits (722), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 82/201 (40%), Positives = 115/201 (57%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FIS EGIEG+GKTT I  L   L+   + V +TREPGG P A+  R +LL         
Sbjct: 3   FFISLEGIEGSGKTTQIKRLADRLESLGHAVLITREPGGCPIADQIRQILLHPDNGHLDP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE +++AAAR  HV  VIRPAL +GKI+LCDR+ D++ AYQG         +  L E++
Sbjct: 63  KAELLLYAAARAQHVAEVIRPALDQGKIVLCDRYCDATLAYQGYARGLDLPMVKQLNELA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                P  T++LD+P D GL R ++R +L        FE++ +  H K RQ +LD+AR +
Sbjct: 123 AGNCRPHLTLLLDMPHDRGLLRARSRNALGAGPEEGRFEQESLAFHNKVRQGYLDLARQE 182

Query: 185 PDRCHIVDSAHSFQSVATNIL 205
           P R  +VD+  +   V   I 
Sbjct: 183 PQRIKVVDANGTLDEVCHRIW 203


>gi|148265181|ref|YP_001231887.1| dTMP kinase [Geobacter uraniireducens Rf4]
 gi|189028834|sp|A5G696|KTHY_GEOUR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146398681|gb|ABQ27314.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 213

 Score =  281 bits (720), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 120/211 (56%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG+EG GKTT I LL + L  + + V VTREPGG P A+ AR +LL        
Sbjct: 2   GCFITFEGVEGCGKTTQIKLLAQHLTEQGHTVIVTREPGGCPIADQARAILLDADNRAMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR  HV+ +++PAL   K++LCDRF D++ AYQG         +  L ++
Sbjct: 62  PTTELLLYAAARAQHVQEIVKPALAANKVVLCDRFTDATIAYQGYGRGLDPATIAYLNDL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + P  T++LD PV++GLKR  +R +    A  + FE + V+ H K R  +L +A +
Sbjct: 122 ATDGLKPRLTVLLDCPVEVGLKRAFDRINGAAGAREERFELESVLFHRKVRDGYLKLAED 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +P+R  I+D +   Q     I   V   + +
Sbjct: 182 EPERFIIIDGSQGVQETEAAITAAVLARLAE 212


>gi|78223521|ref|YP_385268.1| thymidylate kinase [Geobacter metallireducens GS-15]
 gi|78194776|gb|ABB32543.1| thymidylate kinase [Geobacter metallireducens GS-15]
          Length = 217

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 82/220 (37%), Positives = 121/220 (55%), Gaps = 4/220 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GK+T + L+   L R  + V VTREPGG P A+A R +LL        
Sbjct: 2   GFFITFEGIEGCGKSTQVRLVAERLSRAGHGVVVTREPGGCPIADAIRAILLDARNSAMV 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV  VI PAL  GKI+LCDRF DS+ AYQG         +  L  +
Sbjct: 62  PMAELLLYAAARAQHVAEVIEPALAAGKIVLCDRFTDSTMAYQGFGRKLDRELIAQLNSL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + PD T++LD  V+ GL R   R +   +A  + FE++ ++ HE+ R  FL +A  
Sbjct: 122 AAGSIRPDLTLLLDCSVETGLARAMARINTSSAAREERFEQESILFHERIRDGFLSLAAA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +P R  ++D +   +        +V E +  R+    +++
Sbjct: 182 EPGRFVVLDGSGGIEE----TEALVTEAILARLPASPARR 217


>gi|95930676|ref|ZP_01313410.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684]
 gi|95133328|gb|EAT14993.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684]
          Length = 216

 Score =  279 bits (714), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 124/210 (59%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT I LL   L+ + +DV  TREPGG   A+  R VLL    +   
Sbjct: 2   GQFITFEGIEGCGKTTQIRLLATALRHQGHDVIETREPGGCDIADQIRAVLLDAKNNRMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  E +++AAAR  HV  VIRPAL  GK +LCDRF D++ AYQG         + +L   
Sbjct: 62  SPTELLLYAAARAQHVAEVIRPALDAGKTVLCDRFCDATLAYQGYGRQLDIDQITTLNAY 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q V PD T++LDLPV+IGL R + R         D FE++ +  H++ RQ +L +A N
Sbjct: 122 ACQGVRPDTTLLLDLPVEIGLGRARQRNEQHSGPNEDRFEQESLNFHQRIRQAYLQLADN 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +P R  I+D+    Q+VA  I + +  ++Q
Sbjct: 182 EPQRFLIIDAQGKPQTVAERIASAMNTIIQ 211


>gi|328950279|ref|YP_004367614.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
 gi|328450603|gb|AEB11504.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884]
          Length = 202

 Score =  278 bits (711), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 12/205 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG+GK+T  + L  +L+++   V VTREPGGTP   A R  LLS   +
Sbjct: 1   MKPGFFITFEGPEGSGKSTQAAHLAAWLRQQGVSVVVTREPGGTPLGRAVRQWLLS---E 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E +++ A R +HV +VIRPAL  G++++ DRF+DSSYAYQG        +L ++
Sbjct: 58  SMDPVTEFLLYTADRAEHVRHVIRPALAAGQVVISDRFVDSSYAYQGFGRGLDLEWLRAV 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  ++ ++PD T +LDLP ++GL R   R         D  E++ +  H + R+ +  +
Sbjct: 118 SQPVLEGLVPDVTFLLDLPPEVGLARKAER---------DRLEQESLAFHRRVREGYRVL 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           AR +P R  ++D+    + +   + 
Sbjct: 169 ARAEPQRFVVLDATQPPEVIVEQVR 193


>gi|158319119|ref|YP_001511626.1| dTMP kinase [Alkaliphilus oremlandii OhILAs]
 gi|158139318|gb|ABW17630.1| dTMP kinase [Alkaliphilus oremlandii OhILAs]
          Length = 210

 Score =  277 bits (710), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG +G+GK+T I  +KRFL+ K Y V +TREPGGT   E  R ++L     
Sbjct: 1   MHKGLFITIEGPDGSGKSTQIHFIKRFLEEKGYKVVLTREPGGTVIGEKIRELVLDKNHK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HV   I PA+ EG I+LCDRF+DSS  YQG+        +  +
Sbjct: 61  EMANVTEALLYAASRAQHVAQRIIPAIEEGSIVLCDRFVDSSIVYQGKGRGLGVENIRDI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD TI+LD+  +IG++R ++      +   D  E++ +  H      + ++
Sbjct: 121 NDFATMGLKPDLTILLDIDPEIGIERAKS------AKEADRLEQEKIDFHRIVYDGYKEL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  P+R  +VD+  S + V+  I  I+ +++
Sbjct: 175 VQMYPERIKVVDANQSIEEVSKGIEYILNKIL 206


>gi|241204716|ref|YP_002975812.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858606|gb|ACS56273.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 236

 Score =  277 bits (710), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEG EGAGK+T I  L   L+ + +DV +TREPGG+P AEA RHVLLS   + F
Sbjct: 15  TGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEAF 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE VIRPAL  GK++LCDRF+DSS  YQG   + +  F+++LQ 
Sbjct: 75  GTRMEAILFAAARNDHVEEVIRPALASGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQR 134

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  VMPDCT+ILD+P  +GL+R Q R +       D FE++ +  HEKRR+ FLDIA 
Sbjct: 135 IAINGVMPDCTVILDIPAKVGLERAQKRAAAD---APDRFEKERLETHEKRREAFLDIAA 191

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+RCH+V++  S +++A  IL IV +L+
Sbjct: 192 REPERCHVVNAMQSEEAIAAEILAIVQQLL 221


>gi|116252223|ref|YP_768061.1| thymidylate kinase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256871|emb|CAK07965.1| putative thymidylate kinase (ec 2.7.4.9) (dtmp kinase) [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 226

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/210 (51%), Positives = 150/210 (71%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEG EGAGK+T I  L   L+ + +DV +TREPGG+P AEA RHVLLS   + F
Sbjct: 5   TGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEAF 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE VIRPAL  GK++LCDRF+DSS  YQG   + +  F+++LQ 
Sbjct: 65  GTRMEAILFAAARNDHVEEVIRPALAAGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQR 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  VMPDCT+ILD+P  +GL+R Q R +       D FE++ +  HEKRR+ FLDIA 
Sbjct: 125 IAINGVMPDCTVILDIPAKVGLERAQKRAAAD---APDRFEKERLETHEKRREAFLDIAA 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+RCH+V++  + +++A  IL IV +L+
Sbjct: 182 REPERCHVVNAMQTEEAIAAEILAIVKQLL 211


>gi|117929178|ref|YP_873729.1| thymidylate kinase [Acidothermus cellulolyticus 11B]
 gi|117649641|gb|ABK53743.1| thymidylate kinase [Acidothermus cellulolyticus 11B]
          Length = 688

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 7/222 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++FEG EGAGK+T + LL R+L  + Y+V V+REPGGTP     R +LL       
Sbjct: 464 TGFFVAFEGGEGAGKSTQVELLARYLADRGYEVVVSREPGGTPLGHRLREILLDPREPAP 523

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV  VIRPAL  G I++ DR++DSS AYQG         ++ L  
Sbjct: 524 SPRAEALLYAADRAEHVAKVIRPALARGAIVISDRYVDSSLAYQGGGRDLSPRDVEQLSR 583

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T++LD+P D GL R   R         D  + +D   HE+ R +F   A 
Sbjct: 584 FATSGLRPDLTVLLDVPPDEGLARTGRRD-----RAPDRLQAEDAAFHERVRNVFRQRAE 638

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             P+R  ++D+  S   +   ++  +  ++     P  + +D
Sbjct: 639 ADPERYLVIDARLSAADIHRLVVQRILPVLP--FPPKRAPRD 678


>gi|296271416|ref|YP_003654048.1| thymidylate kinase [Thermobispora bispora DSM 43833]
 gi|296094203|gb|ADG90155.1| thymidylate kinase [Thermobispora bispora DSM 43833]
          Length = 686

 Score =  276 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+FEG EG+GKTT   +L  +L+ + YDV  TREPGGT      R +LL      
Sbjct: 464 RRGLFIAFEGGEGSGKTTQARMLAIWLRDQGYDVVQTREPGGTKLGMRLRAILLDSAHQG 523

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +EA+++AA R +HVE VIRPAL  G  ++ DR++DSS AYQG         +  + 
Sbjct: 524 ISGRSEALLYAADRAEHVEKVIRPALRRGSAVISDRYVDSSLAYQGAGRMLDRDEVARIN 583

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   ++PD T++LD+P  +GL+R+         +  D  E + +  HE+ R+    +A
Sbjct: 584 EWATGGLVPDLTVVLDVPPAVGLRRM--------GSPADRLEAEPLEFHERVRRELRALA 635

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+R  +VD     + V   I + V E++
Sbjct: 636 AAEPERYLVVDGTLPQEEVTRIIQDRVREIL 666


>gi|209549399|ref|YP_002281316.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535155|gb|ACI55090.1| dTMP kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 226

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 112/210 (53%), Positives = 149/210 (70%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEG EGAGK+T I  L   L+   +DV VTREPGG+P AEA RHVLLS   + F
Sbjct: 5   TGLFVTFEGGEGAGKSTQIRRLAEALKGDGHDVLVTREPGGSPGAEAVRHVLLSGAAEAF 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   + Q  F+++LQ 
Sbjct: 65  GTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGVTGNLQPDFIETLQR 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  VMPDCT+ILD+P  IGL+R Q R +       D FE++ +  HEKRR+ FLDIA 
Sbjct: 125 IAINGVMPDCTVILDIPAKIGLERAQKRAATD---APDRFEKERLETHEKRREAFLDIAA 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+RCH++++  S +++A  I+ IV +L+
Sbjct: 182 REPERCHVINAMQSEEAIAAEIVAIVRQLM 211


>gi|238062269|ref|ZP_04606978.1| dTMP kinase [Micromonospora sp. ATCC 39149]
 gi|237884080|gb|EEP72908.1| dTMP kinase [Micromonospora sp. ATCC 39149]
          Length = 698

 Score =  276 bits (707), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SGLF+ FEG EGAGK+T ++ L   L+ +  +V VTREPG T      R +LL    + 
Sbjct: 458 SSGLFVVFEGGEGAGKSTQLAALAEQLRGQGREVVVTREPGATEVGARIRALLLDATAEG 517

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG   +     +  L 
Sbjct: 518 PSPRAEALLYAADRAHHVATVVRPALARGAVVISDRYVDSSLAYQGAGRTLPVDEVSWLS 577

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   + PD  ++LD+    GL RV  R     S   D  E + V  HE+ R  FLD+A
Sbjct: 578 SWATGGLKPDLVVLLDVDPHTGLSRVAAR-----SEGTDRLEAESVAFHERVRYAFLDLA 632

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            N P R  ++D++   +  A  +   V E +
Sbjct: 633 ANDPKRYLVLDASRPVEETAALVARRVKEFL 663


>gi|118580087|ref|YP_901337.1| dTMP kinase [Pelobacter propionicus DSM 2379]
 gi|166223097|sp|A1APK9|KTHY_PELPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118502797|gb|ABK99279.1| thymidylate kinase [Pelobacter propionicus DSM 2379]
          Length = 219

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 3/217 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG+GKTT I LL   L+   Y V +TREPGG   ++  R +LL        
Sbjct: 2   GYFITFEGIEGSGKTTQIGLLGEQLESLGYSVVMTREPGGCAISDKIRSILLDADNSSIS 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR  HV  VI PAL +G I+LCDRF D++ AYQG         +D+L ++
Sbjct: 62  PMTELLLYAAARAQHVSEVIIPALKQGNIVLCDRFSDATLAYQGSGRGIAREKVDTLNQL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q + PD T+++D  V +GL+R + R         + FE + +  H   R+ +L++A  
Sbjct: 122 ACQSLRPDLTVLIDCDVSVGLERARRRIETASGPREERFELEALEFHRSVREAYLELAHA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
           +P R   VD +   + ++  I   V +++Q R++  S
Sbjct: 182 EPQRFITVDGSGGVEEISEAI---VAQVLQNRLNNTS 215


>gi|190891837|ref|YP_001978379.1| thymidylate kinase protein [Rhizobium etli CIAT 652]
 gi|190697116|gb|ACE91201.1| thymidylate kinase protein [Rhizobium etli CIAT 652]
          Length = 236

 Score =  275 bits (705), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 109/209 (52%), Positives = 150/209 (71%), Gaps = 3/209 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHVLLS   + F
Sbjct: 15  TGLFVTFEGGEGAGKSTQIRRLAETLKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAF 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   + +  F+++LQ 
Sbjct: 75  GTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQR 134

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  V+PDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA 
Sbjct: 135 IAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAA 191

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +P+RCH+V++  + +++A  IL IV +L
Sbjct: 192 REPERCHVVNAMQTEEAIAAEILAIVKQL 220


>gi|39997327|ref|NP_953278.1| thymidylate kinase [Geobacter sulfurreducens PCA]
 gi|59798354|sp|Q74AX0|KTHY_GEOSL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|39984218|gb|AAR35605.1| thymidylate kinase [Geobacter sulfurreducens PCA]
 gi|298506264|gb|ADI84987.1| thymidylate kinase [Geobacter sulfurreducens KN400]
          Length = 213

 Score =  275 bits (705), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 123/212 (58%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT I    + L+   + V VTREPGG P A+  R +LL  G     
Sbjct: 2   GYFITFEGIEGCGKTTQIKRAAQSLREAGHRVVVTREPGGCPIADDIRAILLDAGNSAMV 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR  HV  VI PAL EG ++LCDRF DS+  YQG   +     +  L  +
Sbjct: 62  PTTELLLYAAARAQHVAEVIAPALAEGAVVLCDRFTDSTLVYQGFGRNLDRDLIARLNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ PD TI+LD PV +GL R   R + R++   + FER+ ++ HE+ R+ FL +A  
Sbjct: 122 AAGQIRPDLTILLDCPVAVGLARAAARINSRQTNREERFERESLLFHERVREGFLSLAGG 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +P R  ++D     ++ AT + +++   V +R
Sbjct: 182 EPHRFAVIDGNDGVEATATAVADVLLNRVPRR 213


>gi|307312732|ref|ZP_07592363.1| thymidylate kinase [Sinorhizobium meliloti BL225C]
 gi|307317216|ref|ZP_07596657.1| thymidylate kinase [Sinorhizobium meliloti AK83]
 gi|306897304|gb|EFN28049.1| thymidylate kinase [Sinorhizobium meliloti AK83]
 gi|306899457|gb|EFN30089.1| thymidylate kinase [Sinorhizobium meliloti BL225C]
          Length = 234

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 3/224 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EGAGK+T + LL   L  + Y V  TREPGG+  AEA RHVLLS   +
Sbjct: 11  LAKGFFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG   EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS  YQG   + +  F+++L
Sbjct: 71  SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + ++V  V+PDCTII DLP  +GL+R + R +   +   D FE++ +  HEKRR+ FLDI
Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           A   P+RC +VD+     ++A  +L++V  L+     P  S  +
Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231


>gi|330465259|ref|YP_004403002.1| thymidylate kinase [Verrucosispora maris AB-18-032]
 gi|328808230|gb|AEB42402.1| thymidylate kinase [Verrucosispora maris AB-18-032]
          Length = 753

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 7/213 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLF+ FEG EGAGK+T ++ L   L+ +  DV VTREPG T      R ++L    D+
Sbjct: 513 SAGLFVVFEGGEGAGKSTQLAQLAERLRAEGRDVVVTREPGATGVGTRIRSLVLDNNTDD 572

Query: 62  --FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                 AEA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG   +     L  
Sbjct: 573 EAPSPRAEALLYAADRAHHVATVVRPALSRGAVVISDRYVDSSLAYQGAGRTLPVDELSW 632

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + PD  ++LD+    GL RV  R     S   D  E + +  HE+ R  FLD
Sbjct: 633 LSSWATGGLKPDLVVLLDIDPRAGLSRVAER-----SRAADRLEAESLAFHERVRYAFLD 687

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A   P R  ++D+ H  + +A  + + V EL+
Sbjct: 688 LAAADPKRYLVLDAGHPVEQIAERVADRVTELL 720


>gi|291296874|ref|YP_003508272.1| thymidylate kinase [Meiothermus ruber DSM 1279]
 gi|290471833|gb|ADD29252.1| thymidylate kinase [Meiothermus ruber DSM 1279]
          Length = 205

 Score =  274 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 127/210 (60%), Gaps = 11/210 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+FEG EGAGK+T   LL  +L+ K  +V +TREPGGT   +A R +LL    D  
Sbjct: 2   KGLFITFEGPEGAGKSTQARLLAEWLRAKGREVVLTREPGGTRLGQAIRGLLLHQ--DPM 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AEAE ++++A R +H++ VI+PAL  G I+LCDR+LDSS AYQG        +L ++ +
Sbjct: 60  CAEAEYLLYSADRAEHMQRVIQPALGLGHIVLCDRWLDSSLAYQGYGRGLDLGWLRAVAQ 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + Q + P  T + DLP ++GL+R + R         D  ER+ +  H + RQ +L++A+
Sbjct: 120 GATQGIRPHKTFLFDLPPEVGLERFEGR---------DRLEREPLEFHRRVRQGYLELAQ 170

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+R  ++D+    +++ T +   +  L+
Sbjct: 171 AEPERFVLLDATQPLEALHTQLRGYLESLL 200


>gi|86357778|ref|YP_469670.1| thymidylate kinase protein [Rhizobium etli CFN 42]
 gi|86281880|gb|ABC90943.1| thymidylate kinase protein [Rhizobium etli CFN 42]
          Length = 236

 Score =  274 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/209 (51%), Positives = 148/209 (70%), Gaps = 3/209 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHVLLS   + F
Sbjct: 15  TGLFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAF 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   +    F+++LQ 
Sbjct: 75  GTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLDPDFIETLQR 134

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  V+PDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA 
Sbjct: 135 IAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAA 191

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +P+RC +V++  + +++A  IL IV +L
Sbjct: 192 REPERCRVVNAMQTEEAIAAEILAIVKQL 220


>gi|296131635|ref|YP_003638882.1| thymidylate kinase [Thermincola sp. JR]
 gi|296030213|gb|ADG80981.1| thymidylate kinase [Thermincola potens JR]
          Length = 211

 Score =  274 bits (703), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 80/206 (38%), Positives = 115/206 (55%), Gaps = 1/206 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG +GAGKTT +    + LQ K Y+V +TREPGGT   E+ R +LL       
Sbjct: 2   TGKFITFEGPDGAGKTTQMKRAAQALQEKGYEVILTREPGGTEIGESIRSILLDPQN-RM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  HVE +I PAL  GK++LCDRF DS+ AYQG         L+ +  
Sbjct: 61  SHRTEALLYAAARAQHVEELILPALQAGKVVLCDRFADSTLAYQGYGRGINLNLLNIVNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++  + PD TIILDL   +GL R++N+         D  E + V  H++ R+ FL IA 
Sbjct: 121 LAIGSLKPDLTIILDLDPQVGLNRIRNKRLAVAGETEDRIEMEKVEFHQRVREGFLSIAL 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R  I+ +      V   ++  +
Sbjct: 181 QDPGRYKIIAAGMDEDKVFEKVMACI 206


>gi|158423797|ref|YP_001525089.1| thymidylate kinase [Azorhizobium caulinodans ORS 571]
 gi|158330686|dbj|BAF88171.1| thymidylate kinase [Azorhizobium caulinodans ORS 571]
          Length = 235

 Score =  274 bits (703), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 94/220 (42%), Positives = 131/220 (59%), Gaps = 5/220 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG EG GK+T    L   LQ+   +V +TREPGG+  AEA RHVLLS    +F
Sbjct: 5   RGRFITLEGGEGTGKSTQARRLAAALQKGGLEVVLTREPGGSAGAEAVRHVLLSGAAKDF 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G + EA++FAAAR DHV+++IRPAL  GK ++CDRF+DS+  YQG   +     LDSL+ 
Sbjct: 65  GPQGEALLFAAARADHVDSLIRPALAAGKWVICDRFIDSTRVYQGAVGAVPGALLDSLEW 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++  E  PD T++LD+P ++GL R   R         D FE + +  H + R  FL +A+
Sbjct: 125 VAAAEARPDLTLVLDVPPEVGLSRAAGR-----GEGADRFESEGLAFHTRVRDAFLALAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             P RC IVD++     VA  + + V E +     PLS+K
Sbjct: 180 ADPARCVIVDASGGPDDVAALVWSSVRERLVPPERPLSAK 219


>gi|114320572|ref|YP_742255.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311744|sp|Q0A8S2|KTHY_ALHEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|114226966|gb|ABI56765.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 217

 Score =  274 bits (701), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 5/222 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG+EGAGK+T ++ ++ +LQR+  D  +TREPGGTP  E  R +LL     
Sbjct: 1   MTRGRFITLEGLEGAGKSTALTRVREYLQRQGIDAVMTREPGGTPLGERIRALLLGQSEP 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++  AAR +H++  I PAL  G+ ++CDRF D+SYAYQG         + +L
Sbjct: 61  PMAPATEALLMFAARSEHLDKRIWPALERGQWVVCDRFTDASYAYQGWGRGLGAERIAAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ +   + PD T+ LD+PV+ GL R   R         D FE++     E+  + +  +
Sbjct: 121 EDWTQGALRPDLTLWLDVPVETGLARAAGR-----GEAPDRFEQERDGFFERVHEGYAAL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           A   P+R   VD+    ++V T +   +   V + +S   + 
Sbjct: 176 AERFPERIRRVDAGQPLEAVLTALEEALASAVTRWLSGTEAH 217


>gi|220934998|ref|YP_002513897.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996308|gb|ACL72910.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 218

 Score =  274 bits (701), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG EG GK+T I  L+ FL+ +   + VTREPGGTP AE  R +LLS      
Sbjct: 8   RGRFITLEGAEGVGKSTQIQALQAFLESRGVPLLVTREPGGTPLAERIRELLLSRDHPPM 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR +H+   I PAL  G  +LCDRF D++YAYQG         +  L++
Sbjct: 68  HPDTELLLMFAARAEHLRTRILPALEAGTWVLCDRFTDATYAYQGGGRGLDPARIAVLED 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                V PD T++LD+ V  GL R + R         D FE++ +   E+ R+ +L  AR
Sbjct: 128 WVQGPVRPDLTLLLDVDVRTGLARARGR------GEADRFEQEAMDFFERVREAYLARAR 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  I+D+  S ++V  ++   +  L+Q
Sbjct: 182 AEPSRYRIIDAGQSLEAVTRDLQAALVSLLQ 212


>gi|15965357|ref|NP_385710.1| putative thymidylate kinase, dTMP kinase protein [Sinorhizobium
           meliloti 1021]
 gi|23821796|sp|Q92PW7|KTHY_RHIME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|15074537|emb|CAC46183.1| Putative thymidylate kinase, dTMP kinase [Sinorhizobium meliloti
           1021]
          Length = 234

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/224 (46%), Positives = 144/224 (64%), Gaps = 3/224 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T + LL   L  + Y V  TREPGG+  AEA RHVLLS   +
Sbjct: 11  LAKGFFITFEGGEGTGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG   EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS  YQG   + +  F+++L
Sbjct: 71  SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + ++V  V+PDCTII DLP  +GL+R + R +   +   D FE++ +  HEKRR+ FLDI
Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           A   P+RC +VD+     ++A  +L++V  L+     P  S  +
Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231


>gi|218682276|ref|ZP_03529877.1| thymidylate kinase [Rhizobium etli CIAT 894]
          Length = 226

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 110/210 (52%), Positives = 147/210 (70%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEG EGAGK+T I  L   L+ +  DV +TREPGG+P AEA RHVLLS   + +
Sbjct: 5   TGLFVTFEGGEGAGKSTQIRRLAAALKGEGQDVLMTREPGGSPGAEAVRHVLLSGAAEAY 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   S    F+++LQ 
Sbjct: 65  GTRMEAILFAAARNDHVEEVIRPALTAGKIVLCDRFMDSSRVYQGITGSLDPDFIETLQR 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++  V PDCT+ILD+P  IGL+R Q R +       D FE++ +  HEKRR+ FLDIA 
Sbjct: 125 VAINGVTPDCTVILDIPAKIGLERAQKRAAAD---APDRFEKERLETHEKRREAFLDIAA 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+RCH+V++  S +++A  IL IV +L+
Sbjct: 182 REPERCHVVNAMQSEEAIAAEILAIVKQLL 211


>gi|295689513|ref|YP_003593206.1| thymidylate kinase [Caulobacter segnis ATCC 21756]
 gi|295431416|gb|ADG10588.1| thymidylate kinase [Caulobacter segnis ATCC 21756]
          Length = 208

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEG EGAGK+T I  L   LQ   +DV VTREPGG+P AEA R +L++   D
Sbjct: 1   MTQGFFISFEGGEGAGKSTQIRRLAERLQAAGHDVVVTREPGGSPGAEAIRELLVNGAAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E ++  AAR DHVE VIRPAL  G ++LCDRF DS+ AYQG    +    + SL
Sbjct: 61  RWSPVTETLLMYAARRDHVERVIRPALARGAVVLCDRFADSTRAYQGAGGDAPASLIASL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  +   +PD T+ILDLP +IGL+R + R           FE K +  HE+ R  +L+I
Sbjct: 121 EDHVLSGTVPDLTLILDLPAEIGLERAEARGGAA------RFESKGLAFHERLRAGYLEI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           AR +P+RC ++++     +V   I   V + +++
Sbjct: 175 ARREPERCVVIEANADIDAVTAAISRTVDQRLER 208


>gi|158521178|ref|YP_001529048.1| dTMP kinase [Desulfococcus oleovorans Hxd3]
 gi|229500940|sp|A8ZXL3|KTHY_DESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|158510004|gb|ABW66971.1| dTMP kinase [Desulfococcus oleovorans Hxd3]
          Length = 214

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 1/208 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEGAGKTT +  L  FL++  +   VTREPGGT   +  R +LL     +   
Sbjct: 1   MFITLEGIEGAGKTTQLPRLVDFLEQHGHTCVVTREPGGTGMGQKIRSLLLDPDNSDMSP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  ++AA R  HV  +I PAL EGK ++CDRF D++  YQG         +  L  ++
Sbjct: 61  ETELFLYAADRAQHVRRLIEPALAEGKTVVCDRFADATEVYQGWARGLDMELVQVLNRVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
                PD T++ DLP + GLKR   R +       D  FE + +  HE+ R  +LD+AR 
Sbjct: 121 TGGRKPDITLLFDLPPEAGLKRAWQRIARNGKEAADCRFENEKMAFHERVRHGYLDLARR 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +P+R  ++D+      VA  ++  +  +
Sbjct: 181 EPERFVVIDALGPAAEVAGRMIAALERV 208


>gi|258510140|ref|YP_003183574.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476866|gb|ACV57185.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 213

 Score =  272 bits (696), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I+FEGI+GAGKTT +  L  +L+ +   V VTREPGGT   +A R +LL     
Sbjct: 1   MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HVE +IRPAL  G+I+LCDRF+D+S AYQG        ++++L
Sbjct: 61  EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++  + PD T+  DL       R++ R    E   LD  ER+D    E+    F  +
Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARA---EGGGLDRIERRDEAFFERVADAFERL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            R  P+    +D+A S   +   I  +VW L+Q+ +
Sbjct: 178 WRAAPEVRKRIDAARSPDDIEQEIRALVWNLIQQHL 213


>gi|218960693|ref|YP_001740468.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans]
 gi|167729350|emb|CAO80261.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans]
          Length = 217

 Score =  271 bits (695), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 7/213 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+FEGIEG+GKTT I +L   L+ K      TREPGGT  +EA R +LL+    E
Sbjct: 12  SKGLFITFEGIEGSGKTTQIIMLVEVLKAKGIPYVTTREPGGTKISEAIRDLLLNPKFME 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E +++ A+R  H   +I PAL EGKI++ DR+ DS+YAYQG         ++ L 
Sbjct: 72  MKPETELLLYCASRAQHTAELILPALEEGKIVISDRYFDSTYAYQGAARELDEEVINVLT 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             S     PD T +LDLPV++GL R++NR        LD  E++ +  HEK R+ FL IA
Sbjct: 132 RFSTYGRNPDLTFLLDLPVEVGLARIKNRN-------LDRLEQETLSFHEKVRRQFLSIA 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P R  ++D     + +   IL+ +   + +
Sbjct: 185 NKYPSRYIVLDGESQAEIIHRQILSTLQPFIGE 217


>gi|197105068|ref|YP_002130445.1| thymidylate kinase [Phenylobacterium zucineum HLK1]
 gi|196478488|gb|ACG78016.1| thymidylate kinase [Phenylobacterium zucineum HLK1]
          Length = 211

 Score =  271 bits (695), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T +  L   L+ +  +V  TREPGG+  AE+ R ++L+   D
Sbjct: 1   MARGRFITFEGGEGAGKSTQVKRLAARLEAQGLEVVTTREPGGSAGAESIRALVLNGEAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E ++  AAR DH+E VIRPAL  G  ++CDRF DS+ AYQG    +    + +L
Sbjct: 61  RWSPVTETLLMYAARRDHIERVIRPALARGAWVICDRFADSTRAYQGAAGGTDPALIAAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +++V PD T++ DLP ++GL+R   R           FE K +  H++ R+ F  I
Sbjct: 121 EAHILEDVRPDLTLVFDLPPEVGLERAHARAGAEM-----RFESKGMAFHQRLREGFRAI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +P RC ++D+     +V   +   V E +
Sbjct: 176 AAAEPQRCAVIDATAPMDAVEGAVWTAVSERL 207


>gi|189425005|ref|YP_001952182.1| dTMP kinase [Geobacter lovleyi SZ]
 gi|254808293|sp|B3E2K5|KTHY_GEOLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189421264|gb|ACD95662.1| dTMP kinase [Geobacter lovleyi SZ]
          Length = 212

 Score =  271 bits (695), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 78/208 (37%), Positives = 116/208 (55%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T I+LL   LQ+    V +TREPGG P A+  R VLL         
Sbjct: 1   MFITFEGIEGCGKSTQIALLAASLQQAGQRVLLTREPGGCPIADQIRSVLLDAANTALVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++AA+R  H+  V+ PAL EG I+LCDRF D++ AYQ          +++L  ++
Sbjct: 61  MAELMLYAASRAQHLAEVVSPALAEGVIVLCDRFSDATRAYQSFGRGIDRQVIETLNSLA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T++LD PV+ GL R + R         + FE + +  H++ R  +L +A  +
Sbjct: 121 CDGISPDLTVLLDCPVETGLGRARQRIDSTSGPREERFELESLAFHQRVRDGYLQLAAEE 180

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P R  IVD+      VA+ I + V   +
Sbjct: 181 PGRFVIVDATVQPAQVASAISDAVLSRL 208


>gi|218289082|ref|ZP_03493319.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240907|gb|EED08085.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1]
          Length = 213

 Score =  271 bits (695), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I+FEGI+GAGKTT +  L  +L+ +   V VTREPGGT   +A R +LL     
Sbjct: 1   MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HVE +IRPAL  G+I+LCDRF+D+S AYQG        ++++L
Sbjct: 61  EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++  + PD T+  DL       R++ R    E   LD  ER+D    E+    F  +
Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARV---EGGGLDRIERRDEAFFERVADAFERL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            R  P+    +D+A S   +   I  +VW L+Q+ +
Sbjct: 178 WRAMPEVRKRIDAARSPDDIEQEIRALVWNLIQQHL 213


>gi|145596534|ref|YP_001160831.1| thymidylate kinase [Salinispora tropica CNB-440]
 gi|145305871|gb|ABP56453.1| thymidylate kinase [Salinispora tropica CNB-440]
          Length = 705

 Score =  271 bits (694), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 117/217 (53%), Gaps = 6/217 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVD 60
           ++GLF+ FEG EGAGK+T ++LL   L+ +  DV VTREPG T   E  R +LL   G +
Sbjct: 446 SAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGVGERIRSLLLGQPGSE 505

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA R  HV  V+RPAL  G ++  DR++DSS AYQG   +     +  L
Sbjct: 506 VPSPRAEALLYAADRAHHVATVVRPALARGAVVTSDRYVDSSLAYQGVGRTLPVDEVSWL 565

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD  ++LD+  + GL RV  R         D+ E + V  HE+ R  FLD+
Sbjct: 566 SSWATGGLKPDLVVLLDIDPNTGLSRVAAR-----GGVSDHLEAESVSFHERVRYAFLDL 620

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A   P R  ++D+A     +A  +   V EL+  +  
Sbjct: 621 AAADPRRYLVLDAARPTDEIADEVARRVAELLGAQAG 657


>gi|229917431|ref|YP_002886077.1| thymidylate kinase [Exiguobacterium sp. AT1b]
 gi|259494270|sp|C4KZW9|KTHY_EXISA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229468860|gb|ACQ70632.1| thymidylate kinase [Exiguobacterium sp. AT1b]
          Length = 212

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+ EG +G+GK+T + LL   L++K YD+ VTREPGGT      R VLLS    E 
Sbjct: 2   SGMFITVEGPDGSGKSTQLQLLVENLKQKGYDIVVTREPGGTTVGNQIREVLLSPDHHEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++AA+R  +VE VIRPAL  G I+LCDRF+D+S AYQG         + SL E
Sbjct: 62  TPRVEMMLYAASRAQNVEQVIRPALERGAIVLCDRFIDASIAYQGYGLQYDLDQIRSLNE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T + DL  +    R+++R        LD  E +D   HE+    F  + +
Sbjct: 122 WATNGLTPDLTFLFDLNPERASARMKDR------GQLDRIESRDQAFHERVYAGFQTLLK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R   +D+  S + +   +L+   E +Q+
Sbjct: 176 QYPERIVRIDADQSIECIQDEVLDYTIERLQQ 207


>gi|159039919|ref|YP_001539172.1| dTMP kinase [Salinispora arenicola CNS-205]
 gi|157918754|gb|ABW00182.1| dTMP kinase [Salinispora arenicola CNS-205]
          Length = 703

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 6/212 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVD 60
           ++GLF+ FEG EGAGK+T ++LL   L+ +  DV VTREPG T   E  R +LL   G +
Sbjct: 446 SAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGIGERIRSLLLGQPGSE 505

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG   +     +  L
Sbjct: 506 VPSPRAEALLYAADRAHHVATVVRPALARGAVVVSDRYIDSSLAYQGAGRTLPVDEVSWL 565

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD  ++LD+    GL RV  R     S   D+ E + V  HE+ R  FLD+
Sbjct: 566 SSWATGGLKPDLVVLLDIDPHTGLSRVAVR-----SGATDHLEAESVSFHERVRYAFLDL 620

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P    ++D+A     +A  +   + EL+
Sbjct: 621 AATDPKHYLVLDAARPADEIADEVARRITELL 652


>gi|110633933|ref|YP_674141.1| thymidylate kinase [Mesorhizobium sp. BNC1]
 gi|123162339|sp|Q11HZ9|KTHY_MESSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110284917|gb|ABG62976.1| thymidylate kinase [Chelativorans sp. BNC1]
          Length = 225

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/215 (48%), Positives = 142/215 (66%), Gaps = 3/215 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T I LL   L+R+  DV  TREPGG+P AEA RHVLLS   + F
Sbjct: 4   RGFFITFEGGEGAGKSTQIHLLADRLRREGRDVLTTREPGGSPGAEAIRHVLLSGAAEPF 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA  EAI+FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+ +L+ 
Sbjct: 64  GATLEAILFAAARSDHVEQVIRPAVESGAIVLCDRFLDSSRVYQGVTGGLASDFMAALER 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V  ++PD T+ILD+  + GL+R   R   R  A  D FE++++ IH +RR+ FL+IA 
Sbjct: 124 VTVNGLIPDLTVILDIDPEEGLRRASER---RGKATADRFEKENLEIHRRRREAFLNIAA 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +P RC ++D++ S  +V+ N+  IV  ++  R  
Sbjct: 181 REPQRCVVIDASRSADAVSENVTEIVLRVIFDRAG 215


>gi|330502601|ref|YP_004379470.1| thymidylate kinase [Pseudomonas mendocina NK-01]
 gi|328916887|gb|AEB57718.1| thymidylate kinase [Pseudomonas mendocina NK-01]
          Length = 210

 Score =  271 bits (694), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL    +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLRERGIDVLLTREPGGTPLAERIRELLLEPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H++ VIRPAL  G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLQQVIRPALANGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T+I DLPV+IGL R   R        LD FE++     E  RQ +L  A 
Sbjct: 122 FVQGELRPDLTLIFDLPVEIGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P R  ++D+  +   V  +I  ++  L++
Sbjct: 176 QAPQRYRVLDAGQTLAQVQADIDALLPSLLE 206


>gi|120602139|ref|YP_966539.1| dTMP kinase [Desulfovibrio vulgaris DP4]
 gi|166221739|sp|A1VCE6|KTHY_DESVV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120562368|gb|ABM28112.1| thymidylate kinase [Desulfovibrio vulgaris DP4]
          Length = 224

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 1/209 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T +  L  +LQ+  + V VTREPGG+      R +LL  G  +   
Sbjct: 1   MFITFEGIEGSGKSTALQGLAAWLQQHGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  V+RPAL EG ++L DR+ DS+  YQG       + L    +++
Sbjct: 61  EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V  + PD TI+LDL  + GL R   R         +  FE + +  H + R+ +L  A  
Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALARNIREGMHAAEGRFEAESLAFHTRVREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R  +VD+  S + V  +++ IV   +
Sbjct: 181 HGGRYRVVDATQSPEDVVRDVVGIVAAAL 209


>gi|315501244|ref|YP_004080131.1| thymidylate kinase [Micromonospora sp. L5]
 gi|315407863|gb|ADU05980.1| thymidylate kinase [Micromonospora sp. L5]
          Length = 717

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-D 60
           +SGLF+ FEG EGAGK+T ++ L   L+ +  DV VTREPG TP  +  R ++L     +
Sbjct: 475 SSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGKRIRSLVLGTNPGE 534

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA R  HV  V+RPAL+ G +++ DR++DSS AYQG   +     +  L
Sbjct: 535 APSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQGAGRTLPVDEVSWL 594

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD  ++LD+    GL RV++R     +   D  E + +  HE+ R  FLD+
Sbjct: 595 SSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----NEGTDRLEAESLTFHERVRYAFLDL 649

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P R  ++D++      A  +   V EL+
Sbjct: 650 AAGDPKRYLVLDASRPIDETADAVARRVGELL 681


>gi|144899825|emb|CAM76689.1| Thymidylate kinase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 211

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T + LL   L+ +  +V +TREPGG   AEA R +L+S  VD
Sbjct: 1   MTDGRFITFEGGEGAGKSTQVRLLAESLRGRKREVVLTREPGGADGAEAIRTLLVSGAVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A  EA++ +AAR DH+   + PAL  G  ++CDRF DS+ AYQG         +  L
Sbjct: 61  RWDARTEALLHSAARRDHLVRTVWPALERGAWVICDRFADSTLAYQGYGHGLDRALIGQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E+++    PD T+ILDLPV+ GLKR   R         D +ER  +  H++ RQ FL I
Sbjct: 121 AEVTMGRFRPDLTLILDLPVEEGLKRAGGR-----GGAEDRYERMGLDFHQRLRQGFLAI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +P RC ++D+  S ++V  +IL  V   +
Sbjct: 176 ASAEPRRCAVIDATRSPEAVHQDILAAVTTRL 207


>gi|72163182|ref|YP_290839.1| thymidylate kinase [Thermobifida fusca YX]
 gi|71916914|gb|AAZ56816.1| thymidylate kinase [Thermobifida fusca YX]
          Length = 686

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 118/210 (56%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF+  EG EG+GK+T +  +  +L+ + +DV  TREPG T      R +LL    +  
Sbjct: 464 GGLFVVLEGGEGSGKSTQVREIAVWLRDEGFDVLTTREPGATKLGMRLRTMLLDKANEGM 523

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA R +HV+ VIRPAL  G I++ DR++DS+ AYQG         + ++  
Sbjct: 524 AARTEALLYAADRAEHVDKVIRPALERGAIVISDRYVDSTLAYQGAGRELDPDDVATINN 583

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD TI+LD+P + GL+R  +R +       D  E +++  HE+ R+ FL++A 
Sbjct: 584 WATGRLVPDLTILLDIPAEEGLRRHADRPA-------DRLESENLEFHERVRRCFLELAD 636

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             PDR  ++D+    + +   I   +  ++
Sbjct: 637 RAPDRYLVLDAREPQEEITKAIRRHLRRIL 666


>gi|302864959|ref|YP_003833596.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
 gi|302567818|gb|ADL44020.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
          Length = 718

 Score =  271 bits (693), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 6/214 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVD 60
           +SGLF+ FEG EGAGK+T ++ L   L+ +  DV VTREPG TP  E  R ++L     +
Sbjct: 476 SSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGERIRSLVLGTTPGE 535

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA R  HV  V+RPAL+ G +++ DR++DSS AYQG   +     +  L
Sbjct: 536 APSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQGAGRTLPVDEVSWL 595

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD  ++LD+    GL RV++R     +   D  E + +  HE+ R  FLD+
Sbjct: 596 SSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----AEGTDRLEAESLTFHERVRYAFLDL 650

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A   P R  ++D++      A  +   V EL+  
Sbjct: 651 AAGDPKRYLVLDASRPIDETADAVARRVGELLAD 684


>gi|297566850|ref|YP_003685822.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
 gi|296851299|gb|ADH64314.1| thymidylate kinase [Meiothermus silvanus DSM 9946]
          Length = 202

 Score =  271 bits (693), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 12/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
           SG FI+FEG EGAGK+T + LL  +L+ +  +V +TREPG G       R ++L    + 
Sbjct: 2   SGWFITFEGPEGAGKSTQVKLLAPWLEAQGREVVLTREPGNGGWLGVEVRRLVL--LSEP 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EAE ++++A R +HV  VI PAL  GK++LCDR+LDSS AYQG        +L ++ 
Sbjct: 60  MSPEAEYLLYSADRAEHVRRVIAPALAAGKVVLCDRYLDSSLAYQGYGRGLDLGWLRAVA 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
               Q + P  T +LDLP ++GL R   R         D  ER+ +  H++ R  +L++A
Sbjct: 120 VGVTQGLKPHRTFLLDLPPEVGLARFAGR---------DRLEREPLEFHQRVRAGYLELA 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + +P R  ++D+  S +++   + + +  L++
Sbjct: 171 KAEPQRFVVLDATQSPEAIQAELRSHLSTLLR 202


>gi|46580545|ref|YP_011353.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough]
 gi|59798319|sp|Q72A57|KTHY_DESVH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46449964|gb|AAS96613.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234283|gb|ADP87137.1| thymidylate kinase [Desulfovibrio vulgaris RCH1]
          Length = 224

 Score =  271 bits (693), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T +  L  +LQ++ + V VTREPGG+      R +LL  G  +   
Sbjct: 1   MFITFEGIEGSGKSTALQGLAAWLQQRGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  V+RPAL EG ++L DR+ DS+  YQG       + L    +++
Sbjct: 61  EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V  + PD TI+LDL  + GL R   R         +  FE + +  H + R+ +L  A  
Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALARNIREGMHAAEGRFEAESLAFHTRVREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R  +VD+  S + V  +++ IV   +
Sbjct: 181 HGGRYRVVDATQSPEDVVRDVVGIVAAAL 209


>gi|146306664|ref|YP_001187129.1| thymidylate kinase [Pseudomonas mendocina ymp]
 gi|166223105|sp|A4XST1|KTHY_PSEMY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145574865|gb|ABP84397.1| thymidylate kinase [Pseudomonas mendocina ymp]
          Length = 210

 Score =  270 bits (692), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL    +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLREQGVDVVLTREPGGTPLAERIRELLLDPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H++ VIRPAL +G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLQQVIRPALAKGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T+I DLPV++GL R   R        LD FE++     E  RQ +L  A 
Sbjct: 122 FVQGELRPDLTLIFDLPVEVGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAV 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P    ++D+  +   V  +I  ++  L++
Sbjct: 176 QAPQHYRVLDAGQTLAQVQADIDALLPSLLE 206


>gi|219849803|ref|YP_002464236.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
 gi|219544062|gb|ACL25800.1| dTMP kinase [Chloroflexus aggregans DSM 9485]
          Length = 225

 Score =  270 bits (692), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 5/226 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+FEG EGAGK+T    L   LQ   Y V +TREPGGT   E  R +L+     
Sbjct: 1   MHRGLFITFEGPEGAGKSTQARRLYERLQAAGYPVILTREPGGTRIGELIRRILIDLRHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++F+AAR   V  +IRP L  G I++CDR+ DS++AYQG         L  +
Sbjct: 61  EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRVI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFERKDVMIHEKRRQI 176
            E++   + PD T  L + V+IGL+R Q+     E        +  + +D+  H +    
Sbjct: 121 TEVATGGLKPDLTFYLQIDVEIGLQRKQHARERSERGGQPAEWNRLDARDLAYHRRVMHG 180

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           F+++ + +P+R H +D+      +A  I + V  L+  R++PL+++
Sbjct: 181 FVELMKQEPERWHALDADQPVDELAEQIWHAVMPLL-DRITPLATR 225


>gi|150396510|ref|YP_001326977.1| thymidylate kinase [Sinorhizobium medicae WSM419]
 gi|150028025|gb|ABR60142.1| dTMP kinase [Sinorhizobium medicae WSM419]
          Length = 234

 Score =  270 bits (692), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 106/212 (50%), Positives = 142/212 (66%), Gaps = 3/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  GLFI+FEG EGAGK+T + LL   L  + Y V  TREPGG+  AEA RHVLLS   +
Sbjct: 11  LAKGLFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSAGAEAVRHVLLSGAAE 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG   EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS  YQG   + +  F+++L
Sbjct: 71  SFGVRMEAILFAAARSDHVEEVIRPALEDGTIVLCDRFMDSSRVYQGVTGNLEPSFVETL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + ++V  V+PDCTII DLP  IGL+R + R +   +   D FE++ +  HEKRR+ FLDI
Sbjct: 131 ERVAVNGVIPDCTIIFDLPAAIGLERARRRAA---NNSPDRFEKEQLETHEKRREAFLDI 187

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A     RC +VD+     ++A ++LN+V  L+
Sbjct: 188 AATDSKRCRVVDANRPPAAIAADVLNLVKALL 219


>gi|222055245|ref|YP_002537607.1| dTMP kinase [Geobacter sp. FRC-32]
 gi|254808294|sp|B9M910|KTHY_GEOSF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221564534|gb|ACM20506.1| dTMP kinase [Geobacter sp. FRC-32]
          Length = 214

 Score =  270 bits (692), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 1/211 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT I LL++ L  K + V +TREPGG P A+  R +LL        
Sbjct: 2   GCFITFEGIEGCGKTTQIKLLEQHLAEKGFKVLLTREPGGCPIADQIRAILLDAANSAMT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HVE VI+PAL +  I+LCDRF D++ AYQG         +  L ++
Sbjct: 62  PSAELLLYAAARAQHVEEVIKPALADDCIVLCDRFTDATVAYQGYGRGLDLDSIGYLNQL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIAR 182
           +   + P  TI+LD PV++GLKR   R +   +    + FE +  + H+K R  +L +A 
Sbjct: 122 ATSGLKPQLTILLDCPVEVGLKRALARINGISAGAREERFELESTLFHQKVRNGYLKLAE 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           N+  R  IVD   +       +   V   + 
Sbjct: 182 NEKGRFLIVDGGTNVDETRVAVTTAVIGRLN 212


>gi|81427954|ref|YP_394953.1| thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei
           23K]
 gi|123564716|sp|Q38YT6|KTHY_LACSS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78609595|emb|CAI54641.1| Thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei
           23K]
          Length = 214

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 117/209 (55%), Gaps = 5/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I+FEG +GAGKT+ +  +   LQ++ + ++ VTREPGG P +E  R ++L       
Sbjct: 3   GKLITFEGPDGAGKTSALEAVVARLQKEVSQEIVVTREPGGNPISEQIRQIILDVKNTAM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I+PAL   K+++CDRF+DSS AYQG         +  +  
Sbjct: 63  DDRTEALLYAAARRQHIVEKIQPALAADKLVICDRFVDSSIAYQGAGRGIGEEAVAQMNL 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+ LD+P ++GL R++           D  +++ +  H+K RQ +L +A+
Sbjct: 123 FATDGLTPDLTLYLDVPSEVGLARIKQ----HRQNQYDRLDQEKLAFHQKVRQSYLKLAQ 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             PDR   +D++   ++V T  L ++ + 
Sbjct: 179 AHPDRIKTIDASQPLEAVVTQCLQVIAQA 207


>gi|78357381|ref|YP_388830.1| thymidylate kinase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552103|sp|Q30YW1|KTHY_DESDG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78219786|gb|ABB39135.1| thymidylate kinase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 212

 Score =  269 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 1/208 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T ++ LK +LQ   +   +TREPGG+      R +LL  G D+   
Sbjct: 1   MFITFEGIEGSGKSTALARLKDWLQEHGHGATLTREPGGSRLGGILRSILLDIGNDDLTG 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  ++ A R  HV  VIRPAL EG  ++ DR+ DS+  YQG         L  L +++
Sbjct: 61  ETELFLYLADRSQHVHQVIRPALAEGVAVISDRYADSTVVYQGYGRGLDPALLHRLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V+ + PD T++ DL  +IGLKR   R     +   +  FE + +  H + R+ +L  A  
Sbjct: 121 VRGLWPDLTLLFDLEPEIGLKRATTRNLREGTGATEGRFEAESLAFHTRVREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +R  I+D+A S   V   + + V ++
Sbjct: 181 NKERFRIIDAAASPDEVFEQVRSAVADV 208


>gi|218463772|ref|ZP_03503863.1| thymidylate kinase [Rhizobium etli Kim 5]
          Length = 220

 Score =  269 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/207 (50%), Positives = 147/207 (71%), Gaps = 3/207 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHVLLS   + FG 
Sbjct: 1   MFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAFGT 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EAI+FAAAR DHVE VIRPAL  GKI+LCDRF+DSS  YQG   + +  F+++LQ I+
Sbjct: 61  RMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQRIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  V+PDCT+ILD+P  +GL+R Q R +   +   D FE++ +  HEKRR+ FLDIA  +
Sbjct: 121 INGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAARE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P+RC ++++  + +++A  IL IV +L
Sbjct: 178 PERCRVINAMQTEEAIAAEILAIVKQL 204


>gi|146318315|ref|YP_001198027.1| thymidylate kinase [Streptococcus suis 05ZYH33]
 gi|145689121|gb|ABP89627.1| Thymidylate kinase [Streptococcus suis 05ZYH33]
 gi|292558109|gb|ADE31110.1| Thymidylate kinase [Streptococcus suis GZ1]
          Length = 222

 Score =  269 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEG +GAGKTT +  L   LQ    +V  TREPGG   AE  R+++L+    
Sbjct: 11  MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++F AAR  H++  I P L +GK+LL DRF+DSS AYQG         +  L
Sbjct: 71  AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+           +D  + +   +H + RQ +L I
Sbjct: 131 NQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDMEKADMHRRVRQGYLSI 186

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +P+R   +D++   ++V  N L ++ +   +R
Sbjct: 187 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAER 221


>gi|326202926|ref|ZP_08192793.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
 gi|325987003|gb|EGD47832.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
          Length = 206

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT I L++ FL+    DV ++REPGGT  +E  R+++L  G  
Sbjct: 1   MCKGLFITVEGTDGSGKTTQIKLMEEFLKAAGNDVVLSREPGGTEISETIRNLILDPGNK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++AAAR  HV  VIRP+L  GK ++CDRF+DSSYAYQG         +  +
Sbjct: 61  DISPLTEMLLYAAARAQHVFQVIRPSLESGKCVICDRFVDSSYAYQGCGRGVDLKTVADV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V  V+PD T  L++   + ++R        +S   D  E++ +  H +  + +  +
Sbjct: 121 NRAAVDGVVPDITFFLNIDPRLAIER------RIKSTGADRIEQEKMDFHMRVYEGYRKM 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   PDR   +D++ S + ++  I   + E++
Sbjct: 175 ALLYPDRIKSIDASKSIEEISLQIKTYLKEIL 206


>gi|153009407|ref|YP_001370622.1| thymidylate kinase [Ochrobactrum anthropi ATCC 49188]
 gi|151561295|gb|ABS14793.1| dTMP kinase [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL + L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 6   SGLFITFEGGEGAGKSTQIALLAKHLRANGFDPVITREPGGSPGAEAIRHVILSGNAENY 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA  EA++F AAR DHV  +IRPAL EG+++LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 66  GAAMEALLFGAARADHVNQLIRPALNEGRVVLCDRFIDSSRAYQGVTGNLDRTYMAAVER 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  VMPD TIILD+P + GL R   R   R S   D FE++D+ +HE RRQ FL IA 
Sbjct: 126 IAIDGVMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P+RC ++D+      +A+++   V   +++R
Sbjct: 183 AEPERCKVIDADRLQDQIASDVAKEVDSALKER 215


>gi|297717894|gb|ADI50090.1| thymidylate kinase [Candidatus Odyssella thessalonicensis L13]
          Length = 205

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 81/208 (38%), Positives = 121/208 (58%), Gaps = 5/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++G FI+FEG EG GK+T   LL  +L+++ Y+V +TREPGGT  AE  R +L+S  V+
Sbjct: 1   MSAGKFITFEGGEGTGKSTQCQLLADYLRQQGYEVILTREPGGTDGAELIRALLVSGDVN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    EA++  AAR+DH E VI PAL  G  ++CDRF DS+ AYQG        FL +L
Sbjct: 61  RWSGVTEALLLNAARVDHWEKVISPALNRGAWVICDRFADSTIAYQGFGRGLDIDFLWNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +  V PD T + DL   IG+ R  +R +         FE+ D+  H + R  +L+I
Sbjct: 121 HNSVLPGVQPDLTFVFDLDPAIGINRALSRRTSEV-----RFEKMDIEFHNRMRHGYLEI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A+N P RC +VD+     ++  ++  ++
Sbjct: 176 AKNHPQRCRLVDAGQDINTIHHHLQQMI 203


>gi|227822155|ref|YP_002826126.1| thymidylate kinase [Sinorhizobium fredii NGR234]
 gi|227341155|gb|ACP25373.1| thymidylate kinase [Sinorhizobium fredii NGR234]
          Length = 234

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/221 (48%), Positives = 145/221 (65%), Gaps = 3/221 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++FEG EGAGK+T + LL   L  + YDV  TREPGG+  AEA RHVLLS   + 
Sbjct: 12  TKGLFVTFEGGEGAGKSTQMRLLADSLSGRGYDVLTTREPGGSLGAEAVRHVLLSGAAES 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL +G+I+LCDRF+DSS  YQG   + +  F+++L+
Sbjct: 72  FGVRMEAILFAAARSDHVEEVIRPALQQGRIVLCDRFMDSSRVYQGVTGNLEPGFVETLE 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++V  V+PD TII DLP + GL+R + R     +   D FE++ +  HEKRR+ FLDIA
Sbjct: 132 RVAVNGVVPDRTIIFDLPAEAGLERARRRSL---NVDPDRFEKEQLETHEKRREAFLDIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
              P+RC +VD+    + +A  +L +V  L+     P SS+
Sbjct: 189 EADPERCRVVDATLPPEVIAAEVLRLVEALLPGDGEPQSSR 229


>gi|146340769|ref|YP_001205817.1| thymidylate kinase [Bradyrhizobium sp. ORS278]
 gi|166221723|sp|A4YUL6|KTHY_BRASO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146193575|emb|CAL77592.1| thymidylate kinase [Bradyrhizobium sp. ORS278]
          Length = 226

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 92/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F++FEG EGAGK+T I +L   L++    V +TREPGG+P AE  RH++LS      
Sbjct: 12  RGRFVTFEGGEGAGKSTQIKMLADRLEKDGVRVVLTREPGGSPGAEIMRHLVLSGMGKLL 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GAEAE ++FAAAR DHV NVI PAL +G  +LCDRF DS+ AYQG +       L+++Q 
Sbjct: 72  GAEAETLLFAAARDDHVRNVILPALNQGSWVLCDRFFDSTRAYQGSQGKVAPDVLNAMQR 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++ ++ PD T+ILD+PV++GL+R   R   R S   D FE +D+  H+  R  F  IA 
Sbjct: 132 VTIGDLKPDLTLILDVPVEVGLQRASAR---RGSGAPDRFESEDIKFHKGLRDAFHKIAA 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P RC ++D+  S ++V+  + + V E +
Sbjct: 189 TEPRRCVLIDATASAEAVSNIVWDAVRERL 218


>gi|83588915|ref|YP_428924.1| thymidylate kinase [Moorella thermoacetica ATCC 39073]
 gi|83571829|gb|ABC18381.1| thymidylate kinase [Moorella thermoacetica ATCC 39073]
          Length = 207

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/214 (40%), Positives = 121/214 (56%), Gaps = 8/214 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT +  L+ +L R+   V  TREPGGT  +EA R +LL     
Sbjct: 1   MGRGLFITLEGPDGSGKTTQMDRLEEYLHRRGLAVERTREPGGTLLSEAIRRLLLEPSYS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A AE  ++AAAR  HV   IRPAL  GKI+LCDRF DS+ AYQG         ++ L
Sbjct: 61  PVDARAELFLYAAARAQHVAERIRPALAAGKIVLCDRFSDSTLAYQGYGRQLGAELVERL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +++   + PD T ++D+PV IGL R         S   D  E++D+  H + RQ +LD+
Sbjct: 121 NDLATGNLRPDITFLIDVPVAIGLGR--------HSGGSDRLEQEDLEFHRRVRQGYLDL 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           AR +P R H++D   S   V   I  I+   +++
Sbjct: 173 ARREPRRVHLIDGTPSPDVVWEEIKEILDARLER 206


>gi|223932402|ref|ZP_03624404.1| dTMP kinase [Streptococcus suis 89/1591]
 gi|302023623|ref|ZP_07248834.1| thymidylate kinase [Streptococcus suis 05HAS68]
 gi|330832635|ref|YP_004401460.1| dTMP kinase [Streptococcus suis ST3]
 gi|223898856|gb|EEF65215.1| dTMP kinase [Streptococcus suis 89/1591]
 gi|329306858|gb|AEB81274.1| dTMP kinase [Streptococcus suis ST3]
          Length = 212

 Score =  268 bits (687), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEG +GAGKTT +  L   LQ    +V  TREPGG   AE  R+++L+    
Sbjct: 1   MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++F AAR  H++  I P L +GK+LL DRF+DSS AYQG         +  L
Sbjct: 61  EMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+           +D  + +   +H + RQ +L+I
Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDMEKADMHRRVRQGYLNI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +P+R   +D++   ++V  + L ++ +   +R
Sbjct: 177 LEQEPERFVKIDASQPLEAVVADALAVIKKRFAER 211


>gi|258405528|ref|YP_003198270.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692]
 gi|257797755|gb|ACV68692.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692]
          Length = 215

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 1/206 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T  +LL ++L+   ++V  TREPGG+   +  R +LLS    +   
Sbjct: 1   MFITFEGIEGCGKSTQSTLLAQWLKNHGWEVQTTREPGGSRLGQNLRSILLSMESRDLTG 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E+E  ++ A R  HV   I+PAL +G ++L DRF DS+  YQG         L +L +++
Sbjct: 61  ESELFLYLADRAQHVHQTIKPALDKGAVVLSDRFADSTVVYQGYGRGLDPNLLHTLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           VQ V PD T++ DLPV++GLKR   R         +  FE + +  H + R+ +L  A  
Sbjct: 121 VQGVWPDLTLLFDLPVELGLKRAMARNFQDNKTEQEGRFEAESLAFHSRVREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
             +R  +VD+    +++   +  I+ 
Sbjct: 181 NKNRFQVVDAEPDPETIFNEVQRILR 206


>gi|302390839|ref|YP_003826659.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501]
 gi|302202916|gb|ADL11594.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501]
          Length = 210

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+ EG EGAGK+T I LL ++   + Y+V  TREPGGT      R++LL   +D  
Sbjct: 2   KGLFITLEGPEGAGKSTQIELLNKYFSEQGYEVVQTREPGGTEIGSRIRNILLDSNLDNL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E +++AA+R  HV  VI+PAL EGK+++CDRF D++ AYQG         +  L +
Sbjct: 62  EPKTELLLYAASRAQHVNEVIKPALKEGKVIICDRFSDATLAYQGYGRRLDKDLILKLNQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++   + PD T +LD+  + GL R +N          D  ER+D+  H++ R  +L +A 
Sbjct: 122 MATGGLEPDLTFLLDIEPEEGLLRTKN-------EVRDRIEREDLSFHQQVRDGYLKLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               R  ++D + S +++  N++  + E ++
Sbjct: 175 K-KSRFEVIDGSQSIENIFDNLIETLEERLE 204


>gi|220927615|ref|YP_002504524.1| thymidylate kinase [Clostridium cellulolyticum H10]
 gi|219997943|gb|ACL74544.1| thymidylate kinase [Clostridium cellulolyticum H10]
          Length = 206

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT I L++++L+    +V ++REPGGT  +E  R ++L     
Sbjct: 1   MRKGLFITVEGTDGSGKTTQIKLMEQYLKDMGNEVVLSREPGGTRISEMIRDLILDPENK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++AAAR  HV  VIRPA+  GK ++CDRF+DSSYAYQG         +  +
Sbjct: 61  DISPLTEMMLYAAARAQHVSQVIRPAIESGKSVICDRFVDSSYAYQGCGRGVDLKTIADV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++  V+PD T  LDL   + ++R        +S   D  E++ +  H +  + +  +
Sbjct: 121 NRAAIDGVVPDITFFLDLDPRVAMER------RVKSTGADRIEQEKMDFHIRVYEGYERM 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P+R   +D++ S + +++ I   + E++
Sbjct: 175 ALLYPERIKTIDASKSIEEISSQINIYLKEIL 206


>gi|299133890|ref|ZP_07027084.1| thymidylate kinase [Afipia sp. 1NLS2]
 gi|298591726|gb|EFI51927.1| thymidylate kinase [Afipia sp. 1NLS2]
          Length = 232

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/218 (43%), Positives = 127/218 (58%), Gaps = 7/218 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GK+T I +L   L+ +  +  VTREPGG+P AE  RH+LLS      G
Sbjct: 17  GRFITFEGGEGSGKSTQIQMLADHLKSQGIETLVTREPGGSPGAEIVRHLLLSGVGKLLG 76

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+AE ++FAAAR DHV  VIRPAL +G  +LCDRF DS+ AYQG        F+ +L   
Sbjct: 77  ADAETLLFAAARDDHVHQVIRPALDKGTWVLCDRFTDSTAAYQGAAGKVDPAFIQALTHA 136

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  + PD T ILD+PV +GL+R   R   R     D FE + +  HE  R+ +  IA +
Sbjct: 137 TIGRLEPDLTFILDVPVAVGLQRAIKR---RGRTAADRFEGESLAFHESLREAYRRIAAD 193

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P RC ++D+      VA  I     E +Q R+   SS
Sbjct: 194 NPARCVVIDANAEPAKVAERIR----EALQSRLPAPSS 227


>gi|86608314|ref|YP_477076.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123503195|sp|Q2JN62|KTHY_SYNJB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|86556856|gb|ABD01813.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 206

 Score =  268 bits (686), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 11/208 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EG GKTT  +LL   L+++ Y    TREPGGT   +  R +LL    D F  
Sbjct: 1   MFITLEGGEGVGKTTQQALLVERLRQEGYACLCTREPGGTALGKTLRELLLHG--DPFSP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++AA R +HV  VI PAL  G++++CDRF DS+ AYQG         +  L  ++
Sbjct: 59  LAELLLYAADRAEHVSKVIAPALAAGQVVVCDRFTDSTLAYQGYGRGLDLEKIRQLNHLA 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P  T+ LDLP ++GL R + R         D  E++ +  H +  Q F  +A  +
Sbjct: 119 TGGLQPHLTLWLDLPPEVGLARAKAR---------DRLEQERLEFHRRVYQGFQALAAAE 169

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P R   + +  S   VA  + ++V   +
Sbjct: 170 PQRIVRISAQGSPAEVAARLWSVVEPRL 197


>gi|265984061|ref|ZP_06096796.1| thymidylate kinase [Brucella sp. 83/13]
 gi|306838352|ref|ZP_07471197.1| thymidylate kinase [Brucella sp. NF 2653]
 gi|264662653|gb|EEZ32914.1| thymidylate kinase [Brucella sp. 83/13]
 gi|306406492|gb|EFM62726.1| thymidylate kinase [Brucella sp. NF 2653]
          Length = 214

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILAEK 211


>gi|312962561|ref|ZP_07777051.1| Thymidylate kinase [Pseudomonas fluorescens WH6]
 gi|311283141|gb|EFQ61732.1| Thymidylate kinase [Pseudomonas fluorescens WH6]
          Length = 210

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R VLL+ G ++ 
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G +++CDRF DS+YAYQG         + +L+ 
Sbjct: 62  NPDTELLLVFAARAQHLSEVIRPALARGAVVICDRFTDSTYAYQGGGRGLCLARIATLES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++G+ R   R        LD FE +     +  R  FL  A+
Sbjct: 122 FVQGDLRPDLTLLFDLPVEVGMARASAR------GRLDRFELEGQAFFDLVRSAFLARAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P R H++D++     V   I  ++  L+++
Sbjct: 176 AEPARYHLLDASQPLAQVQQAIDALLPLLLER 207


>gi|168187948|ref|ZP_02622583.1| thymidylate kinase [Clostridium botulinum C str. Eklund]
 gi|169294219|gb|EDS76352.1| thymidylate kinase [Clostridium botulinum C str. Eklund]
          Length = 212

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+ EG EG+GKTT + +++ +L+  N D   TREPGG   +E  R+V+L+    
Sbjct: 1   MNKGIFITLEGPEGSGKTTIVKMIEEYLRENNIDYISTREPGGINISEQIRNVILNKDNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++ A+R  H+   + PAL  GK+++CDRF+DSS AYQG         +  +
Sbjct: 61  EMDPRTEALLYVASRRQHLAERVIPALKSGKVVICDRFVDSSLAYQGYARGIGIDEVMEI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++   MPD T+ LD+  +IGL R+           ++  + + +  H+K R+ +  +
Sbjct: 121 NEFAIDGYMPDLTLYLDIEPEIGLNRISKNSE----REVNRLDLEKLDFHKKVREGYFKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   +++  S   V T + N +  ++
Sbjct: 177 LERYPNRIKQINANQSVDKVFTEVKNFLKSVL 208


>gi|291298371|ref|YP_003509649.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
 gi|290567591|gb|ADD40556.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
          Length = 707

 Score =  268 bits (685), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDE 61
            G F+ FEG EG+GK+T    L  +L+++ ++V +TREPG T      R +LL       
Sbjct: 468 GGTFVVFEGGEGSGKSTQAVKLAAWLRQRGHEVVLTREPGATELGVRIRTLLLDPESGTS 527

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  V+RPAL  G +++ DR++DSS AYQG         +  L 
Sbjct: 528 PSPRTEALLYAADRAQHVSKVVRPALDRGAVVISDRYVDSSLAYQGSGRELPADEVAWLS 587

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   + PD  ++LD+   +GL R          +  D  E++ +  HE  R+ F D+A
Sbjct: 588 HWATGGLKPDLVVLLDIDPRVGLVRATK------GSAGDRLEQEALTFHEAVREKFRDLA 641

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +   R  +VD+  S + +A  +   V  +V
Sbjct: 642 ADDSSRYLVVDATQSPEDIAAKVSERVAAVV 672


>gi|325295138|ref|YP_004281652.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065586|gb|ADY73593.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 206

 Score =  268 bits (685), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 7/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T   LL  +  +K  +  +TREPGGTPAAE  R+ +L    + F A
Sbjct: 1   MFITFEGIEGCGKSTQAKLLYDWFLKKGKEAILTREPGGTPAAEEIRNFILRPRKETFPA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ AAR  HVEN+I+PAL +G  ++CDRF+DS+ AYQG         ++ L E +
Sbjct: 61  FAELCLYMAARGFHVENLIKPALKKGIWVVCDRFVDSTVAYQGYGRGINVELIEKLNEEA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T ++D+PV+IG  R++ R        LD  E++++  HE+ RQ FL IA   
Sbjct: 121 TGNLKPDLTFLIDVPVEIGFSRIKRR-------DLDRMEQEEMDFHERVRQGFLRIAEKN 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
            +R  ++D       +   ILN + +
Sbjct: 174 SERVIVIDGTKKVDEIFDEILNTLKK 199


>gi|261754954|ref|ZP_05998663.1| thymidylate kinase [Brucella suis bv. 3 str. 686]
 gi|306843867|ref|ZP_07476462.1| thymidylate kinase [Brucella sp. BO1]
 gi|38258158|sp|Q8G0U3|KTHY_BRUSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|261744707|gb|EEY32633.1| thymidylate kinase [Brucella suis bv. 3 str. 686]
 gi|306275622|gb|EFM57346.1| thymidylate kinase [Brucella sp. BO1]
          Length = 214

 Score =  268 bits (685), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|206891148|ref|YP_002248232.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206743086|gb|ACI22143.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 209

 Score =  268 bits (685), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+FEGIEG+GKTT   LL   L+++   V  T EPG T A    R +LL+  + 
Sbjct: 1   MNKGIFITFEGIEGSGKTTQGKLLAEKLKKEGLKVLYTYEPGDTEAGRHIRKILLNSEI- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++ A R+ H+E  I+P +  G I++CDRF DS+  YQG         +  L
Sbjct: 60  KINPLCELLLYFADRVQHIEEKIKPCIESGFIVICDRFTDSTLVYQGYARGISIDLIKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I + E MPD T++LD P +IGLKR       ++    D FE +++  HEK RQ +L +
Sbjct: 120 NKIVLDEFMPDLTVLLDCPANIGLKR------NQKINKKDRFEMENLAFHEKVRQGYLKL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A     R  ++D+  S   +A +I   V  ++
Sbjct: 174 AELYKKRFFVLDATESIDKIAEDIYRKVKSIL 205


>gi|16126067|ref|NP_420631.1| thymidylate kinase [Caulobacter crescentus CB15]
 gi|221234837|ref|YP_002517273.1| thymidylate kinase [Caulobacter crescentus NA1000]
 gi|10720067|sp|Q9RQJ9|KTHY_CAUCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|6318310|gb|AAF06831.1|AF099189_1 thymydilate kinase [Caulobacter crescentus CB15]
 gi|13423259|gb|AAK23799.1| thymidylate kinase [Caulobacter crescentus CB15]
 gi|220964009|gb|ACL95365.1| thymidylate kinase [Caulobacter crescentus NA1000]
          Length = 208

 Score =  268 bits (685), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEG EGAGK+T I  L   L+   +DV VTREPGG+P AEA R +L++   D
Sbjct: 1   MTQGFFISFEGGEGAGKSTQIRRLADRLKAAGHDVIVTREPGGSPGAEAIRELLVNGAAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E+++  AAR DH+E VIRP L  G ++LCDRF DS+ AYQG    +    + +L
Sbjct: 61  RWSPVTESLLMYAARRDHIERVIRPGLARGAVVLCDRFADSTRAYQGAGGDAPASLIAAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E  +   +P  T+ILDLP ++GL+R + R           FE K +  HE+ R  +L+I
Sbjct: 121 EEHVLGGTVPVLTLILDLPAEVGLQRAEARGGAA------RFESKGLAFHERLRAGYLEI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           AR +PDRC ++D+     +V   I ++V + +
Sbjct: 175 ARREPDRCVVIDADAELDAVTAAISDVVVQRL 206


>gi|118589860|ref|ZP_01547264.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614]
 gi|118437357|gb|EAV43994.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614]
          Length = 241

 Score =  267 bits (684), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 95/223 (42%), Positives = 134/223 (60%), Gaps = 1/223 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGK+T I+ LK +L+     V VTREPGG+P AE  R +LLS G  + 
Sbjct: 15  SGHFITFEGGEGAGKSTQIARLKTYLEGMGQSVVVTREPGGSPGAEKIRTMLLSGGAKDL 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+  I+PAL  G  +LCDR+ DS++ YQGE       +L  L+ 
Sbjct: 75  GPRGEAMLFAAARADHVDTTIKPALERGDWVLCDRYADSTWVYQGEA-GVDREYLKLLET 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +V  V PD TI++D+PV+IGL RV  R     S   D FE +D+ +H++RR++FL++A+
Sbjct: 134 AAVAGVYPDLTILIDVPVEIGLGRVAERSRTDNSGGPDRFEDEDLKVHQRRRELFLELAK 193

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
            +  R  ++D +     VA  I   V +     +    S   I
Sbjct: 194 IESFRFAVIDGSKGLDEVAAAIREAVQKTFSNDLPQAKSTTSI 236


>gi|253751477|ref|YP_003024618.1| thymidylate kinase [Streptococcus suis SC84]
 gi|253753378|ref|YP_003026519.1| thymidylate kinase [Streptococcus suis P1/7]
 gi|253755793|ref|YP_003028933.1| thymidylate kinase [Streptococcus suis BM407]
 gi|251815766|emb|CAZ51368.1| thymidylate kinase [Streptococcus suis SC84]
 gi|251818257|emb|CAZ56065.1| thymidylate kinase [Streptococcus suis BM407]
 gi|251819624|emb|CAR45362.1| thymidylate kinase [Streptococcus suis P1/7]
 gi|319757895|gb|ADV69837.1| thymidylate kinase [Streptococcus suis JS14]
          Length = 212

 Score =  267 bits (684), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEG +GAGKTT +  L   LQ    +V  TREPGG   AE  R+++L+    
Sbjct: 1   MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++F AAR  H++  I P L +GK+LL DRF+DSS AYQG         +  L
Sbjct: 61  AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+           +D  + +   +H + RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDMEKADMHRRVRQGYLSI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +P+R   +D++   ++V  N L ++ +   +R
Sbjct: 177 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAER 211


>gi|269128739|ref|YP_003302109.1| thymidylate kinase [Thermomonospora curvata DSM 43183]
 gi|268313697|gb|ACZ00072.1| thymidylate kinase [Thermomonospora curvata DSM 43183]
          Length = 671

 Score =  267 bits (684), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 10/223 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+FEG EGAGKTT   L   +L+   YDV  T EPG T      R +LL       
Sbjct: 450 RGVFIAFEGGEGAGKTTQARLTAIWLRDHGYDVVTTNEPGATKVGMRLRAILLDKETTGL 509

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A AE +++AA R +HV NVI+PAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 510 SARAETLLYAADRANHVANVIKPALERGAIVVSDRYVDSSLAYQGYGRELPVEEIAEVNR 569

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T++LDLP   GL R  +          D  E + +  HE+ R+ F  +A 
Sbjct: 570 WATDGLQPDLTVLLDLPPQTGLGRFAS--------PADRMESEPLDFHERVRRGFRKLAE 621

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
             PDR  ++D+    + ++  I + + +++   + P  S +DI
Sbjct: 622 ADPDRYLVLDATRPQEELSRQIRDRLRQILPDPIPP--STEDI 662


>gi|167032505|ref|YP_001667736.1| thymidylate kinase [Pseudomonas putida GB-1]
 gi|189030837|sp|B0KF60|KTHY_PSEPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166858993|gb|ABY97400.1| dTMP kinase [Pseudomonas putida GB-1]
          Length = 210

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAERVRELLLAPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A+
Sbjct: 122 FVQGGLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+A S ++V  +I  ++  +V++
Sbjct: 176 RAPQRYSLLDAAQSLEAVQRDIDALLPGIVER 207


>gi|291452943|ref|ZP_06592333.1| thymidylate kinase [Streptomyces albus J1074]
 gi|291355892|gb|EFE82794.1| thymidylate kinase [Streptomyces albus J1074]
          Length = 1104

 Score =  267 bits (683), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 507 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 566

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 567 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 626

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 627 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 678

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +VD+    + V T + + + +L+
Sbjct: 679 ADQDRYLVVDAGQQPEEVTTVVRHRLDQLL 708


>gi|163868322|ref|YP_001609531.1| thymidylate kinase [Bartonella tribocorum CIP 105476]
 gi|161017978|emb|CAK01536.1| Thymidylate kinase [Bartonella tribocorum CIP 105476]
          Length = 214

 Score =  267 bits (683), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 2/215 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG +G GKT  ISLL  +L  + YDV  TREPGGT  AEA RH+LLS  V ++
Sbjct: 2   SGYFITFEGGDGVGKTVQISLLAEYLSHQGYDVVTTREPGGTAGAEAIRHILLSGKVQQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++F AAR DHV  +I P+L +GKI+LCDRF+DS+  YQG  +      L  L+ 
Sbjct: 62  GPLIEAVLFTAARTDHVAEIIAPSLQKGKIVLCDRFIDSTRVYQGLNERVNSSLLSVLEC 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  +MP  T +LD+P   G+KR   R   +++  +DYFE+K + I E+RRQ FL +A+
Sbjct: 122 IALNGIMPHLTFLLDMPAACGIKRANLR--RKKTEEIDYFEKKPLEIQEQRRQAFLQLAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +P R  ++D+  S + +A  I NI  +++  ++S
Sbjct: 180 QEPHRFRVIDATGSVEVIAHQIKNICHQVLLDKLS 214


>gi|242279385|ref|YP_002991514.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638]
 gi|259494265|sp|C6BUG6|KTHY_DESAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|242122279|gb|ACS79975.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638]
          Length = 217

 Score =  267 bits (683), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 1/210 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GKTT I  L  FL+   ++V VT EPGG+   +  R +LL+    +   
Sbjct: 1   MFITFEGIEGTGKTTQIKKLTAFLEESGHNVDVTLEPGGSRIGKELRKILLNMDSTDITG 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  ++ A R  HV  VI+PA+  GKI++ DRF DS+  YQG         L  L +++
Sbjct: 61  ECELFLYLADRAQHVGQVIKPAVEAGKIIISDRFADSTIVYQGYGRGLDPKLLRELNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V    PD TI+LD+  +IGLKR   R         +  FE + +  H + R+ +L  A  
Sbjct: 121 VSGNWPDLTILLDIDPEIGLKRAMTRNLQENKMQEEGRFEAESLEFHNRVREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             DR  +V++  +   +   I   V E ++
Sbjct: 181 NNDRIVVVNADQTPDEIFKEIKAKVVERIK 210


>gi|239981076|ref|ZP_04703600.1| thymidylate kinase [Streptomyces albus J1074]
          Length = 1095

 Score =  267 bits (683), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 498 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 557

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 558 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 617

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 618 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 669

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +VD+    + V T + + + +L+
Sbjct: 670 ADQDRYLVVDAGQQPEEVTTVVRHRLDQLL 699


>gi|297616259|ref|YP_003701418.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144096|gb|ADI00853.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680]
          Length = 223

 Score =  267 bits (683), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 7/214 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+   FISFEGI+GAGKTT + LL R L    + V   REPG TP +E  R +LL     
Sbjct: 1   MHRKCFISFEGIDGAGKTTQVELLYRKLMDVGFSVVAVREPGSTPLSEKIRELLLDVRNQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  + AE+ ++AAAR   V  +I+PAL  GK+++ DR++DS+ AYQG        FL  L
Sbjct: 61  DISSSAESFLYAAARSQLVAEIIKPALDAGKVVIADRYVDSTIAYQGYGRGMDIEFLKRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++   +MP  TI+LDLP + G+ R       R    LD  ER+ +  H   R+ +L +
Sbjct: 121 NLLATGGLMPCLTILLDLPPEEGIAR-------RGELPLDRLEREGIGFHRAVREGYLTL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +R++PDR  +VD+    + V   IL  V E +++
Sbjct: 174 SRSEPDRIMVVDARLQVEDVHEQILKRVLERLRR 207


>gi|322390021|ref|ZP_08063559.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903]
 gi|321143275|gb|EFX38715.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903]
          Length = 212

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G  ISFEG EGAGK++ +  +   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL  GKI+L DRF+DSS AYQG         ++ L
Sbjct: 61  SMDAKTELLLYIASRRQHLVERVLPALAAGKIVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDVDVEEGLARIAKNQE----REVNRLDLEGLELHQKVRQGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +P+R   +D++ SF++V  ++L ++   +
Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVLENRL 208


>gi|46203463|ref|ZP_00208978.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1]
          Length = 212

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 116/210 (55%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T + LL   L+ +   V  TREPGG+  AEA R +L+      +
Sbjct: 5   RGRFITFEGGEGAGKSTQVRLLADSLRDEGLMVVTTREPGGSTGAEAIRALLVEGDTARW 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++  AAR DH+   + PAL  G  ++CDRF DS+ AYQG         + SL  
Sbjct: 65  DGVTEALLHFAARRDHLLKTVWPALERGAWVICDRFADSTLAYQGFGHGLDPDVIASLYR 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V    PD T++LDLPV+ GL+R   R         D +ER  +  H++ RQ FL IA 
Sbjct: 125 VAVGHFAPDLTLVLDLPVETGLERAGAR-----GGAEDRYERMGLGFHQRLRQGFLGIAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + P RC ++D+  S   V  +I++ V   +
Sbjct: 180 SNPMRCAVIDATRSPDEVHGDIMSTVRARL 209


>gi|299536748|ref|ZP_07050058.1| thymidylate kinase [Lysinibacillus fusiformis ZC1]
 gi|298727862|gb|EFI68427.1| thymidylate kinase [Lysinibacillus fusiformis ZC1]
          Length = 209

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNS LFI+FEG EGAGKTT I ++ + L  KN +V  TREPGG   AE  R ++L+    
Sbjct: 1   MNSNLFITFEGPEGAGKTTVIQMIAKRLTEKNIEVLATREPGGIEIAEKIRTIILNPAHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H    +RPAL  GK+++CDRF+DSS AYQG         + S+
Sbjct: 61  AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQGYARGIGVNEVLSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++ + +PD TI+ DL  ++GL R+        +  ++  + + +  H+K R+ +L +
Sbjct: 121 NEFAIGKKLPDVTILFDLAPEVGLARIHA----TGNREVNRLDVESLPFHQKVREGYLQL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               P+R  +V++    ++V  ++  ++ E +Q
Sbjct: 177 VEQYPERIRVVNADQDIENVVEDVWLLLLEAMQ 209


>gi|134297938|ref|YP_001111434.1| dTMP kinase [Desulfotomaculum reducens MI-1]
 gi|172044205|sp|A4J0K6|KTHY_DESRM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|134050638|gb|ABO48609.1| thymidylate kinase [Desulfotomaculum reducens MI-1]
          Length = 207

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 6/207 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEG++G+GK+T ++LL ++L +K      TREPGGTP  E  R +LL     E    
Sbjct: 5   FIVFEGVDGSGKSTQLNLLNKYLSQKEIKTICTREPGGTPVGEKIRELLLDPNFAEIQDR 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++++AAR   V  VIRP L +G ++LCDR++DS+ AYQG        FL  + E++ 
Sbjct: 65  TEALLYSAARAQLVAQVIRPQLEQGTVVLCDRYIDSTLAYQGYGRGMDISFLAQINELAS 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             +MP+ TI+LDLP + GL+R       R+    D  E + +  + K R  +L++A+ +P
Sbjct: 125 GGLMPNITILLDLPPEEGLQR------SRKDRPADRLENESLTFYHKVRSGYLEMAKRKP 178

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212
           D   ++D+  + + +   I   V  L+
Sbjct: 179 DTYLVLDARQTMEQLHRQICCRVGGLL 205


>gi|94986082|ref|YP_605446.1| thymidylate kinase [Deinococcus geothermalis DSM 11300]
 gi|94556363|gb|ABF46277.1| Thymidylate kinase [Deinococcus geothermalis DSM 11300]
          Length = 210

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 7/217 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLF++FEG EGAGK+T ++ L + L         TREPGGTP     R VLL   + 
Sbjct: 1   MRPGLFVTFEGPEGAGKSTQLARLAQRLAETGRPPVTTREPGGTPLGMRVREVLLDPALT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++++A+R   V +VIRPAL  G+++LCDR+ DSS AYQG        FL +L
Sbjct: 61  -IDPLPEFLLYSASRAQLVRDVIRPALAAGQVVLCDRYADSSLAYQGSGRGLDPAFLAAL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD TI+LDL   +GL R  +R         D  ER D+  H + R  FLD+
Sbjct: 120 TGEVTGGLQPDLTILLDLDPALGLARAASR------GQPDRLERADLTFHRRVRHGFLDL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A   P+R  ++D+A    S+A +I   V E ++ +  
Sbjct: 174 AAQAPERFLVLDAARDPDSLAADIWRAVQERLRAQTG 210


>gi|212703732|ref|ZP_03311860.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098]
 gi|212672884|gb|EEB33367.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098]
          Length = 217

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 1/216 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GKTT   LL   L+++ +DV +TREPGG     A R +LL         
Sbjct: 1   MFITFEGIEGSGKTTAQQLLALELEKRGHDVLLTREPGGCGLGRALRPILLDARNAGLCN 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R  HV  ++RPAL  G+I++CDR+ DS+ AYQG         L    +++
Sbjct: 61  RAELYLFLADRAQHVAEIVRPALEAGQIVICDRYTDSTLAYQGYGRGRDPDRLRRANDLA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
              + PD T++ DLPV +GL+R   R     +   +  F+ + +  HE+ RQ +L IA  
Sbjct: 121 TGGLQPDLTLLCDLPVSVGLERAGLRNRREGTVLSEGRFDSESLNFHERVRQGYLTIAEE 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           +PDR  I+D++   + V    L+ V   +++R S L
Sbjct: 181 EPDRIAIIDASQQPEDVVLQCLSAVERHLKRRGSGL 216


>gi|51894393|ref|YP_077084.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863]
 gi|59798210|sp|Q67JB0|KTHY_SYMTH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|51858082|dbj|BAD42240.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863]
          Length = 214

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 86/217 (39%), Positives = 125/217 (57%), Gaps = 7/217 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEG++G+GK+T I LL ++L  ++     TREPGGTP AE  R VLL          
Sbjct: 4   FISFEGVDGSGKSTQIRLLLQYLDEQSVPYVFTREPGGTPIAEQIRRVLLDPANRGMSVI 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAAAR +HV   IRPAL EGK+++CDRF+DSS  YQG        FL  + E++ 
Sbjct: 64  TEALLFAAARAEHVSRTIRPALEEGKVVICDRFVDSSLVYQGVAGGLPVEFLTQINEMAT 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P  TI+LDL  ++ L R       R     D  ER+    H+  R+ +LD+AR +P
Sbjct: 124 GALRPHRTIVLDLAPEVALAR-------RTGEEADRIERQSREYHQLVREGYLDLARAEP 176

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            R  +VD++ S + V  +I  +V E++ +R     ++
Sbjct: 177 RRVKVVDASRSVEEVQKDIRRLVEEVLPRRFRGAGTR 213


>gi|92117540|ref|YP_577269.1| thymidylate kinase [Nitrobacter hamburgensis X14]
 gi|122417817|sp|Q1QLT8|KTHY_NITHX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91800434|gb|ABE62809.1| thymidylate kinase [Nitrobacter hamburgensis X14]
          Length = 230

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/210 (43%), Positives = 129/210 (61%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EG+GK+T I++L   L        VTREPGG+P AE  RH++LS      
Sbjct: 12  RGRFITFEGGEGSGKSTQINILAERLNAAKLRAIVTREPGGSPGAEIIRHLVLSGMGKLL 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA AE ++FAAAR DHV  VI+PAL +G  +LCDRF DS+ AYQG         L++L+ 
Sbjct: 72  GAYAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRAYQGRLGDVLPGVLNALER 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++ ++ PD T+ILD+PV+IG++R   R   R S   D FE +DV  H+K R  + DIA 
Sbjct: 132 VTIGDLKPDLTVILDVPVEIGMQRAAVR---RGSGAPDRFEAEDVAFHQKLRDAYRDIAA 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + P RC ++D+     +VA  +   + + V
Sbjct: 189 SDPQRCVVIDANADVNTVAAGVWAALRDRV 218


>gi|17987272|ref|NP_539906.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|148558979|ref|YP_001258934.1| thymidylate kinase [Brucella ovis ATCC 25840]
 gi|189024159|ref|YP_001934927.1| Thymidylate kinase [Brucella abortus S19]
 gi|225627470|ref|ZP_03785507.1| thymidylate kinase [Brucella ceti str. Cudo]
 gi|225852497|ref|YP_002732730.1| thymidylate kinase [Brucella melitensis ATCC 23457]
 gi|237815418|ref|ZP_04594416.1| thymidylate kinase [Brucella abortus str. 2308 A]
 gi|260545335|ref|ZP_05821076.1| thymidylate kinase [Brucella abortus NCTC 8038]
 gi|260563999|ref|ZP_05834485.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260754728|ref|ZP_05867076.1| dTMP kinase [Brucella abortus bv. 6 str. 870]
 gi|260757951|ref|ZP_05870299.1| dTMP kinase [Brucella abortus bv. 4 str. 292]
 gi|260883749|ref|ZP_05895363.1| thymidylate kinase [Brucella abortus bv. 9 str. C68]
 gi|261213980|ref|ZP_05928261.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya]
 gi|261222160|ref|ZP_05936441.1| thymidylate kinase [Brucella ceti B1/94]
 gi|261314279|ref|ZP_05953476.1| thymidylate kinase [Brucella pinnipedialis M163/99/10]
 gi|261325087|ref|ZP_05964284.1| thymidylate kinase [Brucella neotomae 5K33]
 gi|261752297|ref|ZP_05996006.1| thymidylate kinase [Brucella suis bv. 5 str. 513]
 gi|261758182|ref|ZP_06001891.1| thymidylate kinase [Brucella sp. F5/99]
 gi|265988662|ref|ZP_06101219.1| thymidylate kinase [Brucella pinnipedialis M292/94/1]
 gi|265991077|ref|ZP_06103634.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994912|ref|ZP_06107469.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|265998125|ref|ZP_06110682.1| thymidylate kinase [Brucella ceti M490/95/1]
 gi|265999472|ref|ZP_05466544.2| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|294852415|ref|ZP_06793088.1| thymidylate kinase [Brucella sp. NVSL 07-0026]
 gi|297248318|ref|ZP_06932036.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196]
 gi|23821787|sp|Q8YH15|KTHY_BRUME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221724|sp|A5VQD7|KTHY_BRUO2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238689366|sp|B2S5K6|KTHY_BRUA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808281|sp|C0RIW8|KTHY_BRUMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|17982949|gb|AAL52170.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|148370236|gb|ABQ60215.1| thymidylate kinase [Brucella ovis ATCC 25840]
 gi|189019731|gb|ACD72453.1| Thymidylate kinase [Brucella abortus S19]
 gi|225617475|gb|EEH14520.1| thymidylate kinase [Brucella ceti str. Cudo]
 gi|225640862|gb|ACO00776.1| thymidylate kinase [Brucella melitensis ATCC 23457]
 gi|237790255|gb|EEP64465.1| thymidylate kinase [Brucella abortus str. 2308 A]
 gi|260096742|gb|EEW80617.1| thymidylate kinase [Brucella abortus NCTC 8038]
 gi|260154015|gb|EEW89107.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M]
 gi|260668269|gb|EEX55209.1| dTMP kinase [Brucella abortus bv. 4 str. 292]
 gi|260674836|gb|EEX61657.1| dTMP kinase [Brucella abortus bv. 6 str. 870]
 gi|260873277|gb|EEX80346.1| thymidylate kinase [Brucella abortus bv. 9 str. C68]
 gi|260915587|gb|EEX82448.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya]
 gi|260920744|gb|EEX87397.1| thymidylate kinase [Brucella ceti B1/94]
 gi|261301067|gb|EEY04564.1| thymidylate kinase [Brucella neotomae 5K33]
 gi|261303305|gb|EEY06802.1| thymidylate kinase [Brucella pinnipedialis M163/99/10]
 gi|261738166|gb|EEY26162.1| thymidylate kinase [Brucella sp. F5/99]
 gi|261742050|gb|EEY29976.1| thymidylate kinase [Brucella suis bv. 5 str. 513]
 gi|262552593|gb|EEZ08583.1| thymidylate kinase [Brucella ceti M490/95/1]
 gi|262766025|gb|EEZ11814.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|263001861|gb|EEZ14436.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094155|gb|EEZ18077.1| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|264660859|gb|EEZ31120.1| thymidylate kinase [Brucella pinnipedialis M292/94/1]
 gi|294821004|gb|EFG38003.1| thymidylate kinase [Brucella sp. NVSL 07-0026]
 gi|297175487|gb|EFH34834.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196]
 gi|326409013|gb|ADZ66078.1| Thymidylate kinase [Brucella melitensis M28]
 gi|326538723|gb|ADZ86938.1| thymidylate kinase [Brucella melitensis M5-90]
          Length = 214

 Score =  266 bits (681), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|161618946|ref|YP_001592833.1| thymidylate kinase [Brucella canis ATCC 23365]
 gi|260566467|ref|ZP_05836937.1| thymidylate kinase [Brucella suis bv. 4 str. 40]
 gi|189028828|sp|A9MB09|KTHY_BRUC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|161335757|gb|ABX62062.1| thymidylate kinase [Brucella canis ATCC 23365]
 gi|260155985|gb|EEW91065.1| thymidylate kinase [Brucella suis bv. 4 str. 40]
          Length = 214

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DS  AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSGRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|239831999|ref|ZP_04680328.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301]
 gi|239824266|gb|EEQ95834.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301]
          Length = 218

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL + L+   +D  +TREPGG+P AEA RHV+LS   +++
Sbjct: 6   SGLFITFEGGEGAGKSTQIALLAKHLRASGFDPVITREPGGSPGAEAIRHVILSGNAEKY 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+++LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 66  GPAMEALLFAAARADHVDQLIRPALDEGRVVLCDRFIDSSRAYQGVTGNLDSTYMSAVER 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  +MPD TIILD+P + GL R   R   R S   D FE++D+ +HE RRQ FL IA 
Sbjct: 126 IAIDGIMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++ +     ++A+ I   +  ++++R
Sbjct: 183 AEPRRCKVIGADRPQDAIASEIAREIDSVLKER 215


>gi|261218666|ref|ZP_05932947.1| thymidylate kinase [Brucella ceti M13/05/1]
 gi|261321836|ref|ZP_05961033.1| thymidylate kinase [Brucella ceti M644/93/1]
 gi|260923755|gb|EEX90323.1| thymidylate kinase [Brucella ceti M13/05/1]
 gi|261294526|gb|EEX98022.1| thymidylate kinase [Brucella ceti M644/93/1]
          Length = 214

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +   I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKITDEIRSVVDTILTEK 211


>gi|58336718|ref|YP_193303.1| thymidylate kinase [Lactobacillus acidophilus NCFM]
 gi|73920822|sp|Q5FM02|KTHY_LACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58254035|gb|AAV42272.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus NCFM]
          Length = 216

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +L     +      VTREPGG+  AE  R ++L    D+
Sbjct: 2   KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              + EA+++AAAR  HVE +I+PA+ EGK++  DRF+DSS AYQG+        +  + 
Sbjct: 62  MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGL R++     +E    D  E++D+  H+K  + FL + 
Sbjct: 122 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  PDR  ++++      V   ++  + + + K
Sbjct: 178 KMYPDRFVVINATQPIDQVVKQVVTELKQRLPK 210


>gi|260761774|ref|ZP_05874117.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260672206|gb|EEX59027.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 214

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AE  RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|229592102|ref|YP_002874221.1| thymidylate kinase [Pseudomonas fluorescens SBW25]
 gi|259494277|sp|C3K0M9|KTHY_PSEFS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229363968|emb|CAY51499.1| thymidylate kinase [Pseudomonas fluorescens SBW25]
          Length = 210

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R VLL+ G ++ 
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G +++CDRF DS+YAYQG         + +L+ 
Sbjct: 62  NPDTELLLVFAARAQHLAEVIRPALARGAVVICDRFTDSTYAYQGGGRGLSLARIATLET 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE +     +  R  FL  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARASAR------GRLDRFELEGQAFFDAVRTAFLTRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P+R +++D+A     V   I  ++  L+++
Sbjct: 176 AEPERYYLLDAAQPLAHVQQAIDALLPTLLER 207


>gi|163843261|ref|YP_001627665.1| thymidylate kinase [Brucella suis ATCC 23445]
 gi|189028829|sp|B0CGE4|KTHY_BRUSI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|163673984|gb|ABY38095.1| thymidylate kinase [Brucella suis ATCC 23445]
          Length = 214

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKLIDADRSQEKIADEIRSVVDTILTEK 211


>gi|313499927|gb|ADR61293.1| Tmk [Pseudomonas putida BIRD-1]
          Length = 210

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + P R  ++D+A S ++V  +I  ++  ++++
Sbjct: 176 SAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207


>gi|218885132|ref|YP_002434453.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226732655|sp|B8DN41|KTHY_DESVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218756086|gb|ACL06985.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 215

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 1/215 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG+EG+GK+T ++ +++ L    + V +TREPGG+      R +LL    D+   
Sbjct: 1   MFITFEGMEGSGKSTALNRVQQVLLDAGHGVLLTREPGGSRLGRTLRSILLDLSNDDIVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  VIRPAL EG ++L DR+ DS+  YQG         L  L +++
Sbjct: 61  EAELFLYLADRAQHVGQVIRPALDEGVVVLSDRYADSTVVYQGYGRGLDPERLRELNDMA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V  + PD T++ DLP + GL+R   R     ++  +  FE + +  H + R+ +L  A  
Sbjct: 121 VGGLWPDLTLVFDLPPEEGLRRAMTRNLREGTSVSEGRFEAEHLAFHARVREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
            P R  +VD+  +   V  +++  V  ++     P
Sbjct: 181 HPARFRVVDATRTPDEVFEDVMRAVRSVLSAPARP 215


>gi|163847788|ref|YP_001635832.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222525656|ref|YP_002570127.1| dTMP kinase [Chloroflexus sp. Y-400-fl]
 gi|163669077|gb|ABY35443.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222449535|gb|ACM53801.1| dTMP kinase [Chloroflexus sp. Y-400-fl]
          Length = 226

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 6/227 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T    L   LQ   Y   +TREPGGT  +E  R +L+     
Sbjct: 1   MKQGFFITFEGPEGAGKSTQARRLYERLQSIGYPTILTREPGGTRISELIRRILVDLRHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++F+AAR   V  +IRP L  G I++CDR+ DS++AYQG         L ++
Sbjct: 61  EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRTI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDVMIHEKRRQ 175
            +I+   + PD T+ L + V++GL+R +      E   +     +  + +D+  H++  Q
Sbjct: 121 TDIATGGLKPDLTLYLRIDVEVGLQRKRASRERIEPGSVQPPEWNRLDARDLAYHQRVAQ 180

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            F ++   +P+R + +D+      +A  I  +V   +  +V PL+++
Sbjct: 181 GFNELMAQEPERWYALDADQPVDELAEQIWQVVMARLA-QVMPLAAQ 226


>gi|312868193|ref|ZP_07728393.1| dTMP kinase [Streptococcus parasanguinis F0405]
 gi|311095938|gb|EFQ54182.1| dTMP kinase [Streptococcus parasanguinis F0405]
          Length = 212

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G  ISFEG EGAGK++ +  +   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL  GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  SMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE----REVNRLDLEGLELHQKVRQGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +P+R   +D++ SF++V  ++L ++   +
Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVLENRL 208


>gi|229823580|ref|ZP_04449649.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271]
 gi|229787024|gb|EEP23138.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271]
          Length = 210

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 3/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG +GAGK++ I+ L  +L+ + + V  TREPGG P AE  R V+L     
Sbjct: 1   MFPGKFITLEGPDGAGKSSVIAELTAYLEGQGHQVLTTREPGGVPIAEEIRRVILDVDHI 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++FAAAR  H+  VI PAL +GKI+LCDRF+DSS AYQG         + S+
Sbjct: 61  AMDPRTEALLFAAARRQHLVEVILPALRQGKIVLCDRFVDSSLAYQGMARDIPVDLIWSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +V++ +P  T+++D+P ++GL R+   +  R     D  +++ +  H + RQ FLD+
Sbjct: 121 NQFAVEDQLPALTLLIDVPAEVGLARI---HQARGQRQYDRLDQESLDFHNRVRQAFLDL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+  P+R  ++D       V    ++++ +
Sbjct: 178 AQASPERIKVIDGQAPLDQVVAACIDVLHQ 207


>gi|313885558|ref|ZP_07819308.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619288|gb|EFR30727.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 212

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/208 (37%), Positives = 125/208 (60%), Gaps = 4/208 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFIS EG +G+GK++ I  L   L +  +D+ +TREPGG+P AE  R V+L      
Sbjct: 3   KNGLFISIEGPDGSGKSSAIQGLATRLSQDGFDLVLTREPGGSPIAEQIRQVILDVNNTA 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  H+++ I PAL  GK+++ DRF+DSS AYQG   +     + ++ 
Sbjct: 63  MDPMTEALLYAAGRRQHLKDTILPALAAGKVVISDRFVDSSLAYQGVGRNLSQTDIWNIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++Q  +PD T++LD+P ++GLKR+   Y  R     D  +++D+  H K RQ FLD+A
Sbjct: 123 QYAIQGHLPDITLLLDVPAEVGLKRI---YQARNQRQFDRLDQEDLSFHNKVRQAFLDLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +Q DR H++D+  +   V  +   ++ 
Sbjct: 180 ADQ-DRIHVIDARQAVDQVVEDAFQVLK 206


>gi|227903280|ref|ZP_04021085.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796]
 gi|227868909|gb|EEJ76330.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796]
          Length = 220

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +L     +      VTREPGG+  AE  R ++L    D+
Sbjct: 6   KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              + EA+++AAAR  HVE +I+PA+ EGK++  DRF+DSS AYQG+        +  + 
Sbjct: 66  MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGL R++     +E    D  E++D+  H+K  + FL + 
Sbjct: 126 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  PDR  ++++      V   ++  + + + K
Sbjct: 182 KMYPDRFVVINATQPIDQVVKQVVTELKQRLPK 214


>gi|149182688|ref|ZP_01861155.1| thymidylate kinase [Bacillus sp. SG-1]
 gi|148849598|gb|EDL63781.1| thymidylate kinase [Bacillus sp. SG-1]
          Length = 214

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG EGAGK+T I  +   L  K ++V +TREPGG   AE  R V+L     
Sbjct: 1   MKQGLFITVEGPEGAGKSTIIKKMADELTEKGHEVILTREPGGITIAEEIREVILDPKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H+   + P+L +G I+LCDRFLDSS AYQG         + S+
Sbjct: 61  AMDERTEALLYAAARRQHLAEKVIPSLDKGSIVLCDRFLDSSLAYQGHARGIGMEEVYSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++ + MPD T+  D+  +IGL+R+       +   ++  + + +  HE+ R+ +L +
Sbjct: 121 NKFAIGDTMPDITLYFDVEPEIGLERISA----HKGREVNRLDLETIDFHERVREGYLML 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               P+R   +D++ SF  V  N L I+ + + +R
Sbjct: 177 LEKFPERIKKIDASASFGEVYQNALKIIEKYIDER 211


>gi|148549001|ref|YP_001269103.1| thymidylate kinase [Pseudomonas putida F1]
 gi|166223106|sp|A5W709|KTHY_PSEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148513059|gb|ABQ79919.1| thymidylate kinase [Pseudomonas putida F1]
          Length = 210

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+A S ++V  +I  ++  ++++
Sbjct: 176 GAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207


>gi|222086013|ref|YP_002544545.1| thymidylate kinase [Agrobacterium radiobacter K84]
 gi|221723461|gb|ACM26617.1| thymidylate kinase [Agrobacterium radiobacter K84]
          Length = 227

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 109/210 (51%), Positives = 146/210 (69%), Gaps = 2/210 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF+SFEG EGAGK+T I  L  +L+   +DV VTREPGG+P AEA RHVLLS   + F
Sbjct: 5   TGLFVSFEGGEGAGKSTQIRRLAAWLRELGHDVLVTREPGGSPGAEAVRHVLLSGAAEMF 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EAI+FAAAR DHVE +IRPAL  G I+LCDRF+DSS  YQG   + +  F+++LQ 
Sbjct: 65  GTRMEAILFAAARNDHVEEIIRPALAHGTIVLCDRFMDSSRVYQGITGNLEPDFIEALQR 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V  V+PDCT+ILD+P ++GL+R + R S    A  D FE++++  HEKRR+ FLDIA 
Sbjct: 125 VAVNGVVPDCTLILDIPAELGLERARKRASAD--AAPDRFEKEELQTHEKRREAFLDIAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             PDRCH+VD+      +A  I  I+ + +
Sbjct: 183 RDPDRCHVVDAQRGEDVIADEIAAIIEKRL 212


>gi|254719070|ref|ZP_05180881.1| thymidylate kinase [Brucella sp. 83/13]
 gi|306840480|ref|ZP_07473239.1| thymidylate kinase [Brucella sp. BO2]
 gi|306289495|gb|EFM60713.1| thymidylate kinase [Brucella sp. BO2]
          Length = 211

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILAEK 208


>gi|310639487|ref|YP_003944245.1| thymidylate kinase [Paenibacillus polymyxa SC2]
 gi|309244437|gb|ADO54004.1| Thymidylate kinase [Paenibacillus polymyxa SC2]
          Length = 215

 Score =  265 bits (678), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 122/217 (56%), Gaps = 9/217 (4%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN  G+FI+ EG +G+GKTT I  L ++++ + + V  TREPGG   +E  R ++L    
Sbjct: 1   MNRKGIFITLEGGDGSGKTTMIQRLAKYMEEEGHPVVTTREPGGIEISEKIRSIILDPAH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AAAR  H+   ++PA+ +G I+LCDRF+DSS  YQG         + S
Sbjct: 61  TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +V +  PD T  LD+  ++GL R+           +D  + + +  H K R+ +L+
Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARINA----SRGEEMDRLDMESISFHHKVREAYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +AR  P+R  IVD++ + + V      ++ +L++KR 
Sbjct: 177 LARKFPERITIVDASPAPEQVEQ----VLKDLLKKRF 209


>gi|292493122|ref|YP_003528561.1| thymidylate kinase [Nitrosococcus halophilus Nc4]
 gi|291581717|gb|ADE16174.1| thymidylate kinase [Nitrosococcus halophilus Nc4]
          Length = 213

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FIS EGIEGAGK+T +  +++ L+     V VTREPGGTP  E  R +LL+  ++
Sbjct: 1   MGRGCFISVEGIEGAGKSTQLKFIQQLLESAGKAVTVTREPGGTPLGEQIRTLLLTPRLE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AE E ++  AAR++HV  VI PAL  G+ +LCDRF  +SYAYQG         +++L
Sbjct: 61  GMSAETELLLMFAARVEHVRQVISPALARGRWVLCDRFTGASYAYQGGGRGLPLARIEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  ++  + PD T++LD+PV +GL+R  +R         D FE++     E  R+ +L +
Sbjct: 121 EHWALNHLRPDLTLLLDVPVGVGLQRAASRRQ-----QPDRFEQEQAGFFECVRKAYLSL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A+ + D   ++D++     V   I  ++   ++
Sbjct: 176 AKERVDEFRLIDASMPLPEVQEAIQQVIMAFIE 208


>gi|239908616|ref|YP_002955358.1| thymidylate kinase [Desulfovibrio magneticus RS-1]
 gi|259494267|sp|C4XNX1|KTHY_DESMR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|239798483|dbj|BAH77472.1| thymidylate kinase [Desulfovibrio magneticus RS-1]
          Length = 209

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 1/209 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEG+EG+GK+T ++ L   L+     V  TR+PGG    +  R +LLS        
Sbjct: 1   MFVTFEGVEGSGKSTQMTRLCAALEAAGRTVCRTRQPGGCFLGQTLRAILLSQKTAGLDD 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A R  HV  VIRPAL  G++++CDR+ DS+ AYQG         L +L  ++
Sbjct: 61  RAELFLYLADRAQHVAEVIRPALAAGQVVVCDRYTDSTVAYQGYGRGLDTTLLQNLNAVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              V+PD T++LDL   IGL R  +R  +   +     FE + +  H++ R  +  +A  
Sbjct: 121 AAGVVPDLTVLLDLDPAIGLTRATSRNAAAGTAEAEGRFEAERLEFHQRVRAGYRALAAA 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P R  ++D+A S  +VA  +  +V +L+
Sbjct: 181 EPARFAVIDAAPSPDAVAEAVWGVVGKLL 209


>gi|23501873|ref|NP_698000.1| thymidylate kinase [Brucella suis 1330]
 gi|254704286|ref|ZP_05166114.1| thymidylate kinase [Brucella suis bv. 3 str. 686]
 gi|23347812|gb|AAN29915.1| thymidylate kinase [Brucella suis 1330]
          Length = 211

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|296876048|ref|ZP_06900104.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912]
 gi|296432959|gb|EFH18750.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912]
          Length = 212

 Score =  264 bits (677), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G  ISFEG EGAGK++ +  +   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL  GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  RMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE----REVNRLDLEGLELHQKVRQGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +P+R   +D++ SF++V  ++L ++   +
Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVLETRL 208


>gi|330722496|gb|EGH00323.1| Thymidylate kinase [gamma proteobacterium IMCC2047]
          Length = 216

 Score =  264 bits (677), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 77/214 (35%), Positives = 127/214 (59%), Gaps = 6/214 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G+FI+ EGIEG GKTT+++ ++++LQ    D+ VTREPGGTP AE  R +LL+   + 
Sbjct: 4   QAGVFITVEGIEGVGKTTNMAFIQQYLQALGVDLTVTREPGGTPLAEEIRGLLLNNRDEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR  H+  +I+P L +G  +L DRF D++YAYQG         + +L+
Sbjct: 64  LNNDAELLLVFAARAQHLGQLIKPTLAQGGWVLSDRFTDATYAYQGGGRELSMEMIANLE 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++   ++ P+ T++LD+PV++GL R   R        LD FER+     EK R  +L  A
Sbjct: 124 QMVQGDLRPNLTLLLDVPVEVGLSRAGQR------GELDRFEREKQAFFEKVRHTYLQRA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + +P+R  +VD++    +V  +I   +   + K+
Sbjct: 178 QAEPERFCVVDASQPLAAVQADIEVALRPFLVKQ 211


>gi|308271741|emb|CBX28349.1| Thymidylate kinase [uncultured Desulfobacterium sp.]
          Length = 216

 Score =  264 bits (677), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 1/205 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GKTT I     FL++K  D  +TREPGGT   +  R +LL    +    
Sbjct: 11  MFITFEGIEGSGKTTQIRHAMEFLKQKGKDCLMTREPGGTITGQKIRSILLDPESNGMDP 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E +++ A R +HV  +I PAL  GK +LCDR+ D++ AYQG         LD L ++ 
Sbjct: 71  STELLLYFADRAEHVNKIINPALSAGKTVLCDRYYDATKAYQGFARGLNMDLLDRLHKLI 130

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           + ++ PD TI+LDL    GL R   + +  + A ++  FE++ +  H+K R  +L++AR 
Sbjct: 131 IHDLKPDITILLDLDPKTGLSRAWKQINEGQRAGVETRFEKETLDFHDKVRNGYLELARI 190

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +  R  I+D+++    V  +I+  +
Sbjct: 191 EAKRFKIIDASNDENQVKKDIIKAL 215


>gi|261317627|ref|ZP_05956824.1| thymidylate kinase [Brucella pinnipedialis B2/94]
 gi|261296850|gb|EEY00347.1| thymidylate kinase [Brucella pinnipedialis B2/94]
          Length = 214

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 99/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +
Sbjct: 2   SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ 
Sbjct: 62  GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++   MPD T++LD+    GL R   R   R S   D FE++D+ +HE RRQ FL+IAR
Sbjct: 122 IAIDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211


>gi|308066851|ref|YP_003868456.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681]
 gi|305856130|gb|ADM67918.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681]
          Length = 215

 Score =  264 bits (676), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 9/217 (4%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN  G+FI+ EG +G+GKTT I  L +F++ + Y V  TREPGG   +E  R ++L    
Sbjct: 1   MNRKGIFITLEGGDGSGKTTMIQRLAKFMEEEGYPVITTREPGGIEISEKIRSIILDPAH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AAAR  H+   ++PA+ +G I+LCDRF+DSS  YQG         + S
Sbjct: 61  TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +V +  PD T  LD+  ++GL R+         A +D  + + +  H K R+ +L+
Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARINA----SRGAEMDRLDMESISFHHKVREAYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +AR  P+R  IVD++ + + V      ++ +L++KR 
Sbjct: 177 LARKFPERITIVDASPAPEQVEQ----VLKDLLKKRF 209


>gi|303241047|ref|ZP_07327557.1| thymidylate kinase [Acetivibrio cellulolyticus CD2]
 gi|302591472|gb|EFL61210.1| thymidylate kinase [Acetivibrio cellulolyticus CD2]
          Length = 206

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT I L++ +L+ K ++V VTREPGGT   E  R ++L     
Sbjct: 1   MKRGLFITTEGTDGSGKTTQIKLIESYLKGKGFEVVVTREPGGTSIGEKIRSIILDTENS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++A+AR   V  +I+P+L EGK+++CDRF+DSSY YQG   +     ++ +
Sbjct: 61  DMAYITEMMLYASARAQLVNELIKPSLSEGKVVICDRFIDSSYVYQGFGRNIDIELIERV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I++  +MPD T+  D+  ++ L+R        +S   D  ER+ +  H K    +  +
Sbjct: 121 NRIALDGIMPDVTLFFDIDPEVALER------RIQSTGADRIEREAMDFHRKVYNGYKKL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   PDR   ++S  + + + +++   + + 
Sbjct: 175 ASMYPDRIKAIESNRNIEEIFSDVKAYLDKF 205


>gi|240850633|ref|YP_002972033.1| thymidylate kinase [Bartonella grahamii as4aup]
 gi|240267756|gb|ACS51344.1| thymidylate kinase [Bartonella grahamii as4aup]
          Length = 214

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 2/215 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG +G GKT  ISLL   L  + YDV  TREPGGT  AEA RH+LLS    ++
Sbjct: 2   SGYFITFEGGDGVGKTVQISLLAESLSHQGYDVVTTREPGGTLGAEAIRHILLSGQAQQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++F AAR+DHV  VI P+L +GKI+LCDRF+DS+  YQG  D+     L  L+ 
Sbjct: 62  GPLIEAVLFTAARVDHVTEVIAPSLQKGKIVLCDRFIDSTRVYQGLNDTVSSSLLAVLEC 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++  ++P  T +LD+P   G+KR   R   +E+  +DYFE+  + + E+RRQ FL +A+
Sbjct: 122 IALNGILPHLTFLLDMPAMCGMKRANLR--RKETEEIDYFEKDQLEVQEQRRQAFLQLAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +P R  ++D+  S ++VA  I NI  +++  ++S
Sbjct: 180 QEPHRFRVIDATGSVEAVAHQIKNICHQVLLDKLS 214


>gi|221632235|ref|YP_002521456.1| thymidylate kinase [Thermomicrobium roseum DSM 5159]
 gi|254808313|sp|B9KXL4|KTHY_THERP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221155655|gb|ACM04782.1| thymidylate kinase [Thermomicrobium roseum DSM 5159]
          Length = 210

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 123/214 (57%), Gaps = 8/214 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKTT  +LL   L+   Y + VTREPGGTP  E  R  LL+   +    E
Sbjct: 4   FITFEGPEGAGKTTQCALLAARLREAGYSLLVTREPGGTPLGETIREWLLAG--EALRPE 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++F AAR +HV + IRPAL  G I+LCDR++DS+ AYQG        +L  L  I+ 
Sbjct: 62  TEALLFTAARAEHVWDRIRPALERGTIVLCDRYVDSTLAYQGAGRGLDEGWLRELHRIAT 121

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            ++ PD TI+LD+PV++GL           +A +   +++++  H + R  +   A+  P
Sbjct: 122 GDLWPDLTILLDVPVEVGLA-----RRRAAAATITRLDQEELAFHRRVRAWYHAAAQRDP 176

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK-RVSP 218
            R  +VD+    + VA  +   V E++++ R SP
Sbjct: 177 QRWRVVDATLPPEVVADAVWATVTEVMKRGRRSP 210


>gi|330962619|gb|EGH62879.1| thymidylate kinase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 210

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAARLRAQGVEVLLTREPGGTPLAERVRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ AR
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRTTYLNRAR 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD++ +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDASQTLAQVQASLDTLLPQLLE 206


>gi|239929816|ref|ZP_04686769.1| integral membrane protein with kinase activity [Streptomyces
           ghanaensis ATCC 14672]
 gi|291438148|ref|ZP_06577538.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672]
 gi|291341043|gb|EFE67999.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672]
          Length = 966

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 507 SGFFIALEGGDGAGKSTQAEALAEWIRSKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 566

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +H++ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 567 SHRAEALLYAADRAEHIDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARINR 626

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 627 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 678

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V T I + + +++
Sbjct: 679 ADPGRYLVVDAGQEPEAVTTVIRHRLDQVL 708


>gi|330966243|gb|EGH66503.1| thymidylate kinase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 210

 Score =  264 bits (676), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VI PAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVICPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P+R  +VD+A S   V  ++  ++ EL++
Sbjct: 176 AEPERYRLVDAAQSLADVQASLDKLLPELLE 206


>gi|222148589|ref|YP_002549546.1| thymidylate kinase [Agrobacterium vitis S4]
 gi|221735575|gb|ACM36538.1| thymidylate kinase [Agrobacterium vitis S4]
          Length = 221

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 108/215 (50%), Positives = 141/215 (65%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLF++FEG EGAGK+T I LL   L+   + V  +REPGG+P AEA RHVLLS   + F
Sbjct: 5   SGLFVTFEGGEGAGKSTQIRLLANALEALGFAVVTSREPGGSPCAEALRHVLLSGAAEPF 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G E EAI+FAAAR DHVE  +RPAL+ G ++LCDRF+DSS  YQG   +    F++ LQ 
Sbjct: 65  GVEMEAILFAAARNDHVEARLRPALLRGDMVLCDRFMDSSRVYQGATGNLSSAFIERLQA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+V  V+PD TIILDLP +IGL R +NR         D FE++++ IHE+RR+ FL IAR
Sbjct: 125 IAVDGVVPDLTIILDLPANIGLARAKNRAGALGEDAPDRFEKEEIAIHERRREAFLAIAR 184

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +P RC +VD+    + +A  I   V  L+   V 
Sbjct: 185 AEPARCRVVDARAGIEQIAEEIFAAVKPLLPHNVG 219


>gi|294630603|ref|ZP_06709163.1| thymidylate kinase [Streptomyces sp. e14]
 gi|292833936|gb|EFF92285.1| thymidylate kinase [Streptomyces sp. e14]
          Length = 822

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL      
Sbjct: 508 SSGFFIALEGGDGAGKSTQAEALADWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSQG 567

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  + 
Sbjct: 568 LSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 627

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A
Sbjct: 628 RWATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHARVRAGFLALA 679

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  +VD+    ++V T + + + +++
Sbjct: 680 AADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 710


>gi|83311549|ref|YP_421813.1| thymidylate kinase [Magnetospirillum magneticum AMB-1]
 gi|82946390|dbj|BAE51254.1| Thymidylate kinase [Magnetospirillum magneticum AMB-1]
          Length = 212

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 116/210 (55%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T + LL   L+ +   V  TREPGG+  AEA R +L+    + +
Sbjct: 5   RGRFITFEGGEGAGKSTQVRLLAESLRDEGLMVVTTREPGGSAGAEAIRALLVEGEPERW 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++  AAR DH+   + PAL  G  ++CDRF DS+ AYQG         + SL  
Sbjct: 65  DGVTEALLHFAARRDHLVKTVWPALDRGAWVICDRFADSTLAYQGFGHGLDPDVIASLYR 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V    PD T++LDLPV+ GL+R   R         D +ER  +  H++ RQ FL IA 
Sbjct: 125 VAVGHFAPDLTLVLDLPVEKGLERAGLR-----GGAEDRYERMGLGFHQRLRQGFLGIAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P RC ++D+  S   V  +I++ V   +
Sbjct: 180 ANPMRCAVIDATRSPDEVHGDIMSTVRARL 209


>gi|320159579|ref|YP_004172803.1| thymidylate kinase [Anaerolinea thermophila UNI-1]
 gi|319993432|dbj|BAJ62203.1| thymidylate kinase [Anaerolinea thermophila UNI-1]
          Length = 205

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG+GKTT I L   FL+ + YDV  TREPGGT  ++  R VL++        
Sbjct: 1   MFITFEGPEGSGKTTQIRLFAEFLRARGYDVLTTREPGGTEISDQIRAVLVNLRNTAMHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F AAR   VE VIRPAL  G ++L DR+ DS+ AYQG         L  L + +
Sbjct: 61  RTEILLFQAARAQLVEQVIRPALSRGTLVLSDRYADSTLAYQGYGHGYPLEELRRLIDFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T +LD+    GL+R Q           +  +  D+  H++ R  +L++AR +
Sbjct: 121 TGGLIPDLTFLLDVNPAQGLERKQ------REGEWNRLDAYDLGFHQRVRAGYLEMARAE 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P R  +VD+  S + + ++I     + +  R
Sbjct: 175 PHRWVVVDATQSIEVIQSDIRRCFEQRLAAR 205


>gi|297201354|ref|ZP_06918751.1| thymidylate kinase [Streptomyces sviceus ATCC 29083]
 gi|297147859|gb|EFH28761.1| thymidylate kinase [Streptomyces sviceus ATCC 29083]
          Length = 1065

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 508 AGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARINR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +I  +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVSPEIARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V+T + + + +++
Sbjct: 680 ADPGRYLVVDAGQEPEAVSTVVRHRLDQML 709


>gi|319789392|ref|YP_004151025.1| thymidylate kinase [Thermovibrio ammonificans HB-1]
 gi|317113894|gb|ADU96384.1| thymidylate kinase [Thermovibrio ammonificans HB-1]
          Length = 206

 Score =  264 bits (675), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T   L   +L  + Y   +TREPGGTPAAE  R VLL    + F  
Sbjct: 1   MFITFEGIEGCGKSTQARLTYEWLLDRGYTSVLTREPGGTPAAEKVREVLLKRWEERFPP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ AAR  HVEN+I+PAL EG I++CDRF DS+ AYQ         F+  L   +
Sbjct: 61  MAELFLYEAARAFHVENLIKPALQEGSIVICDRFTDSTLAYQSFGRGLSREFVALLNRKA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T+++DLPV+   +R+  +         D  E + +  H + R+ FL IAR +
Sbjct: 121 TGGLKPDLTLLIDLPVEEAFRRIAQKSR-------DRMESEPLEFHRRVREGFLSIAREE 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           P+R  ++D   +   V   +  ++ E ++
Sbjct: 174 PERVAVIDGRGTVSEVFERVKRVIEERLR 202


>gi|302383105|ref|YP_003818928.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193733|gb|ADL01305.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264]
          Length = 208

 Score =  264 bits (675), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G FI+FEG EG GK+T ++LL   L  +  DV  TREPGG+P  EA R +++S   D
Sbjct: 1   MSRGRFITFEGGEGTGKSTQVALLVDRLGARGRDVIRTREPGGSPGGEAIRSLVVSGSAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A  E ++  AAR DH+E  IRPAL  G+ ++CDRF DSS AYQG    ++  F+++L
Sbjct: 61  RWSARTELLLMFAARSDHLERTIRPALEAGQWVVCDRFADSSRAYQGLAGGAETAFVEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               V    PD T+I DLP ++GL+R   R           FE K +  H+  R+ F  I
Sbjct: 121 DAHVVGTNQPDLTLIFDLPAEVGLERALARAQGDT-----RFESKGLAFHQNLRRAFQTI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           AR  P+RC ++D+  S   V   +   V  +++
Sbjct: 176 ARAHPERCRLIDATGSIDDVQARVWAAVEPVLE 208


>gi|226943614|ref|YP_002798687.1| thymidylate kinase [Azotobacter vinelandii DJ]
 gi|226718541|gb|ACO77712.1| thymidylate kinase [Azotobacter vinelandii DJ]
          Length = 211

 Score =  264 bits (675), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 81/215 (37%), Positives = 118/215 (54%), Gaps = 6/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG EGAGK+T+   L   L+    +V +TREPGGTP AE  R +LL+   +
Sbjct: 1   MSRGLFITLEGPEGAGKSTNRDYLAEGLRAAGREVVLTREPGGTPLAERIRELLLAPASE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++  AAR  H+  VIRPAL+ G ++LCDRF D+SYAYQG         +  L
Sbjct: 61  PMAVDTELLLVFAARAQHLAGVIRPALVRGAVVLCDRFTDASYAYQGAGRGVPEARIAIL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +     ++ PD T++ DLPV++GL R   R         D FE++D    E  RQ +L  
Sbjct: 121 EHFVQGDLRPDLTLLFDLPVEVGLARAAAR------GRPDRFEQEDRAFFEAVRQAYLRR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A N   R  +VD+      V   +  ++ +L++ R
Sbjct: 175 AANDSARYRVVDAGRPLAEVQRTLDGLLPQLLESR 209


>gi|62289916|ref|YP_221709.1| thymidylate kinase [Brucella abortus bv. 1 str. 9-941]
 gi|82699843|ref|YP_414417.1| thymidylate kinase [Brucella melitensis biovar Abortus 2308]
 gi|254689223|ref|ZP_05152477.1| thymidylate kinase [Brucella abortus bv. 6 str. 870]
 gi|254693708|ref|ZP_05155536.1| thymidylate kinase [Brucella abortus bv. 3 str. Tulya]
 gi|254701744|ref|ZP_05163572.1| thymidylate kinase [Brucella suis bv. 5 str. 513]
 gi|254706812|ref|ZP_05168640.1| thymidylate kinase [Brucella pinnipedialis M163/99/10]
 gi|254730256|ref|ZP_05188834.1| thymidylate kinase [Brucella abortus bv. 4 str. 292]
 gi|256031574|ref|ZP_05445188.1| thymidylate kinase [Brucella pinnipedialis M292/94/1]
 gi|256044653|ref|ZP_05447557.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256061085|ref|ZP_05451240.1| thymidylate kinase [Brucella neotomae 5K33]
 gi|256113539|ref|ZP_05454365.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|256159712|ref|ZP_05457459.1| thymidylate kinase [Brucella ceti M490/95/1]
 gi|256254974|ref|ZP_05460510.1| thymidylate kinase [Brucella ceti B1/94]
 gi|256257473|ref|ZP_05463009.1| thymidylate kinase [Brucella abortus bv. 9 str. C68]
 gi|256369414|ref|YP_003106922.1| thymidylate kinase [Brucella microti CCM 4915]
 gi|260168705|ref|ZP_05755516.1| thymidylate kinase [Brucella sp. F5/99]
 gi|62196048|gb|AAX74348.1| Tmk, thymidylate kinase [Brucella abortus bv. 1 str. 9-941]
 gi|82615944|emb|CAJ10967.1| Thymidylate kinase:ATP/GTP-binding site motif A (P-loop) [Brucella
           melitensis biovar Abortus 2308]
 gi|255999574|gb|ACU47973.1| thymidylate kinase [Brucella microti CCM 4915]
          Length = 211

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|296445855|ref|ZP_06887807.1| thymidylate kinase [Methylosinus trichosporium OB3b]
 gi|296256683|gb|EFH03758.1| thymidylate kinase [Methylosinus trichosporium OB3b]
          Length = 238

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 91/208 (43%), Positives = 126/208 (60%), Gaps = 2/208 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+ EG EGAGK+T + LL+  L  +  +   TREPGG+P AEA R  LL      
Sbjct: 16  HPGRFITLEGGEGAGKSTQMRLLQERLAERGVEAIATREPGGSPHAEALREALLGGKAAP 75

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   EAI+F+AAR+DH++ +I+PAL  G  ++CDRF DS+ AYQG R       +  L+
Sbjct: 76  LGPLGEAILFSAARIDHLDRLIKPALARGAWVICDRFADSTRAYQGARGGVDARLITLLE 135

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++    PD TIILD+P +IGL+R   R    ES   D FER+ +  HE  R+ FLDIA
Sbjct: 136 RVALLGAKPDLTIILDIPAEIGLERASRRRRPDES--PDRFEREGLAFHEGLRRAFLDIA 193

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
             +P+RC +VD+    + VA  I +IV 
Sbjct: 194 AGEPERCCVVDARAPEREVAQAIWHIVE 221


>gi|28870981|ref|NP_793600.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|38257966|sp|Q87YH1|KTHY_PSESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28854230|gb|AAO57295.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331019150|gb|EGH99206.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 210

 Score =  263 bits (674), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A S   V  ++  ++ EL++
Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206


>gi|325696293|gb|EGD38184.1| thymidylate kinase [Streptococcus sanguinis SK160]
          Length = 212

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL++    +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKKYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GKI+L DRF+DSS AYQG         +D L
Sbjct: 61  AMDAKTELLLYIASRRQHLAERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVADIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|254714079|ref|ZP_05175890.1| thymidylate kinase [Brucella ceti M644/93/1]
 gi|254716864|ref|ZP_05178675.1| thymidylate kinase [Brucella ceti M13/05/1]
          Length = 211

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +   I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKITDEIRSVVDTILTEK 208


>gi|319654969|ref|ZP_08009043.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2]
 gi|317393394|gb|EFV74158.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2]
          Length = 208

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT I +L   L ++ Y V  TREPGG   AE  R V+L     
Sbjct: 1   MKKGKFITVEGPEGAGKTTIIDMLASNLAKEGYQVLQTREPGGIEIAEQIRSVILDKNNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA+++AAAR  H+   ++PA+ +G I+LCDRF+DSS AYQG         + S+
Sbjct: 61  KMDPRTEALLYAAARRQHLAEKVKPAMDKGYIILCDRFIDSSLAYQGYARGLGIDEVYSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +++ +MP+ T+  D+  + GL R+       +   ++  + + +  H K R+ +L +
Sbjct: 121 NSFAIEGMMPELTLYFDIEPEAGLDRINQ----HKGREVNRLDLEKLDFHHKVREGYLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   +D++ + + V     + + E++
Sbjct: 177 MELYPERIFKIDASGTLEEVYQQAESKLKEII 208


>gi|254697358|ref|ZP_05159186.1| thymidylate kinase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 211

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AE  RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+  + GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|237800352|ref|ZP_04588813.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023209|gb|EGI03266.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 210

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSEESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIATLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV++GL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLAEVQASLDTLLPQLLE 206


>gi|331270648|ref|YP_004397140.1| thymidylate kinase [Clostridium botulinum BKT015925]
 gi|329127198|gb|AEB77143.1| thymidylate kinase [Clostridium botulinum BKT015925]
          Length = 210

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+ EG +G+GKTT + +++++L+  N D   TREPGG   +E  R ++L     
Sbjct: 1   MNKGVFITLEGPDGSGKTTIVKMIEKYLKENNVDYISTREPGGINISEQIREIILDTKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  EA+++ A+R  H+   + PAL  GKI++CDRF+DSS AYQG         + S+
Sbjct: 61  EMDARTEALLYVASRRQHLAERVIPALKLGKIVICDRFIDSSLAYQGYARGIGIDEVMSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++   MP+ T+ LD+  +IGLKR+   +       ++  + + +  H+K R+ +  +
Sbjct: 121 NEFAIDGYMPNLTLYLDIEPEIGLKRISQNH----KREVNRLDLEKLDFHKKVREGYFKV 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
               P+R   +++      V  ++ N + 
Sbjct: 177 LEKYPNRIKKINANQPIDKVFEDVKNYLK 205


>gi|182415140|ref|YP_001820206.1| dTMP kinase [Opitutus terrae PB90-1]
 gi|177842354|gb|ACB76606.1| dTMP kinase [Opitutus terrae PB90-1]
          Length = 216

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDE 61
           +G  ISFEG EG+GK+T +S+L   LQ+   DV  TREPGGT   E  R++++     DE
Sbjct: 9   TGKLISFEGSEGSGKSTQMSMLAARLQKDGRDVVTTREPGGTEIGEQVRNIIVHNSRGDE 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE E ++FAAAR   V  VI PA+ +G I+L DR+LDSS  YQG   +     +  + 
Sbjct: 69  MCAETELLLFAAARAQLVREVIAPAMQKGSIVLSDRYLDSSTVYQGIGRNLAADPVAQIN 128

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +V  VMPD TI++D+P ++GL R++ R     S   D  ER+++  ++K R  +L +A
Sbjct: 129 RFAVGNVMPDLTIVIDVPAEVGLARIRQRA----SDLPDRMERENIDFYKKVRDGYLVLA 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +   DR  ++D   +   V+  I   V E +
Sbjct: 185 KGMADRFVVIDGTQTQDVVSKKIFAAVKERL 215


>gi|297193021|ref|ZP_06910419.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719849|gb|EDY63757.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 1039

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 114/211 (54%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SG FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL      
Sbjct: 519 TSGFFIAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAG 578

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV++VIRPAL  G I++ DR++DSS AYQG         +  + 
Sbjct: 579 LSNRAEALLYAADRAEHVDSVIRPALDRGAIVISDRYIDSSVAYQGAGRDLSPTEIARIS 638

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LD+  +   +R         +   D  E +    H++ R  FL +A
Sbjct: 639 RWATDGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRSGFLTLA 690

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  +VD+     SV T + + + +L+
Sbjct: 691 AADPGRYLVVDAGQEPGSVTTVVRHRLDQLL 721


>gi|325687059|gb|EGD29082.1| thymidylate kinase [Streptococcus sanguinis SK72]
          Length = 212

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVWPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|110833935|ref|YP_692794.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2]
 gi|123050570|sp|Q0VQM6|KTHY_ALCBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110647046|emb|CAL16522.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2]
          Length = 208

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 6/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG EGAGK++++  L   L+ +   V V+REPGGT  AE+ R VLL+   +  
Sbjct: 2   SGRFITLEGGEGAGKSSNLVWLAEALRAEGKTVMVSREPGGTALAESIREVLLAPSNEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+E  IRPAL  G+ +LCDRFLD+++AYQG         + +L+ 
Sbjct: 62  ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFLDATWAYQGAGRGLDSAAIAALEA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +++  PD TI+ D+PV++G+ R   R      A LD  E++D    ++ RQ +L  A 
Sbjct: 122 LVIRDTRPDMTILFDVPVEVGMARAGKR------AALDRIEQEDRAFFDRIRQCYLARAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +P+R   VD++   +SV   +  IV E+
Sbjct: 176 QEPNRFRTVDASQPLESVQQQLARIVEEM 204


>gi|23821779|sp|Q8UFA0|KTHY_AGRT5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 224

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 103/213 (48%), Positives = 144/213 (67%), Gaps = 2/213 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFISFEG EGAGK+T I  L   L+ + ++V VTREPGG+P AEA RHV+LS   + 
Sbjct: 4   KTGLFISFEGGEGAGKSTQIRTLAEALRGRGFEVVVTREPGGSPGAEAVRHVILSGAAES 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  G+I+LCDRFLDSS  YQG   + +  F+++LQ
Sbjct: 64  FGVRMEAILFAAARNDHVEEVIRPALARGEIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I++  V+P+ T+I D+  + GL R + R    E A  D FE++++  HEKRR+ +LDIA
Sbjct: 124 RIAIDGVVPELTLIFDIAAEKGLARARKR--ADEGATPDRFEKEEIETHEKRREAYLDIA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +P RC IV++      V  ++++ V  L+++
Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214


>gi|167646661|ref|YP_001684324.1| thymidylate kinase [Caulobacter sp. K31]
 gi|167349091|gb|ABZ71826.1| dTMP kinase [Caulobacter sp. K31]
          Length = 208

 Score =  263 bits (673), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 85/212 (40%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEG EGAGK+T I  L   L+    DV +TREPGG+P AE  R ++L+  VD
Sbjct: 1   MTRGTFISFEGGEGAGKSTQIRRLAERLKADGADVVLTREPGGSPGAEQIRDLILNGHVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    E ++  A+R DHVE VIRPAL  G I+LCDRF DS+ AYQG    +    + +L
Sbjct: 61  RWSPITETLLMYASRRDHVERVIRPALERGAIVLCDRFADSTRAYQGAGGEAPIALIKAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E  +   +PD T+I D+P ++GL R   R           FE K +  HE+  + FL+I
Sbjct: 121 EEHVLGGTVPDLTLIFDIPAEVGLARALARGGEA------RFESKGLAFHERLGEAFLEI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           AR +P+RC ++++  +  +V  ++   V   +
Sbjct: 175 ARREPERCVVIEADDAIDAVWADVWGAVSARL 206


>gi|313891237|ref|ZP_07824855.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120304|gb|EFR43425.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 209

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ G  I+FEG +GAGKT+ I  L   L+  N  ++ VTREPGG   AE+ R V+L    
Sbjct: 1   MSKGRLITFEGPDGAGKTSVIEGLVPLLENLNQTEIVVTREPGGVSIAESIREVILDVRN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL +G+++L DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEQGQMVLIDRFIDSSVAYQGAGRGLSKKAIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +   V PD T+  DL  +IGL R+       +   ++  + + + +H++ R  +L+
Sbjct: 121 LNDFATDGVTPDLTLYFDLSPEIGLARIAKN----KKREINRLDMEKIEMHQQVRNGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +A+  PDR   VD+  S   V      I+ E
Sbjct: 177 LAKEFPDRIVTVDATKSLDEVVAQAFEIIKE 207


>gi|330952693|gb|EGH52953.1| thymidylate kinase [Pseudomonas syringae Cit 7]
          Length = 210

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGIQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206


>gi|324993714|gb|EGC25633.1| thymidylate kinase [Streptococcus sanguinis SK405]
 gi|324994973|gb|EGC26886.1| thymidylate kinase [Streptococcus sanguinis SK678]
 gi|327462985|gb|EGF09306.1| thymidylate kinase [Streptococcus sanguinis SK1]
 gi|327474588|gb|EGF19993.1| thymidylate kinase [Streptococcus sanguinis SK408]
          Length = 212

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GKI+L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVTDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|27379629|ref|NP_771158.1| thymidylate kinase [Bradyrhizobium japonicum USDA 110]
 gi|46576547|sp|Q89LM5|KTHY_BRAJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|27352781|dbj|BAC49783.1| thymydilate kinase [Bradyrhizobium japonicum USDA 110]
          Length = 228

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 93/219 (42%), Positives = 130/219 (59%), Gaps = 7/219 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EG GK+T I  L   L+       VTREPGG+P AE  RH++LS      
Sbjct: 12  RGRFITFEGGEGTGKSTQIKKLADRLKAARMRTLVTREPGGSPGAEIMRHLVLSGMGKLL 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G EAE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG   S     ++++Q 
Sbjct: 72  GPEAETLLFAAARDDHVHTVIEPALKQGIWVLCDRFADSTRAYQGSLGSVSPGLINAMQR 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++ ++ PD TIILDLPV+IGL+R   R   R S   D FE + +  H+  R+ +  IA 
Sbjct: 132 VTIGDLKPDLTIILDLPVEIGLQRAAAR---RGSGTPDRFEGEQLSFHQGLREAYRKIAA 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           ++P RC ++D+     +VA      VW  ++ R+ P  +
Sbjct: 189 DEPARCVLIDANSDPDTVAGR----VWSALRDRLLPTPA 223


>gi|125718521|ref|YP_001035654.1| thymidylate kinase [Streptococcus sanguinis SK36]
 gi|166223121|sp|A3CPJ9|KTHY_STRSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|125498438|gb|ABN45104.1| Thymidylate kinase, putative [Streptococcus sanguinis SK36]
          Length = 212

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|289770846|ref|ZP_06530224.1| integral membrane protein with kinase activity [Streptomyces
           lividans TK24]
 gi|289701045|gb|EFD68474.1| integral membrane protein with kinase activity [Streptomyces
           lividans TK24]
          Length = 1107

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V T + + + +++
Sbjct: 680 ADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 709


>gi|253680847|ref|ZP_04861650.1| dTMP kinase [Clostridium botulinum D str. 1873]
 gi|253562696|gb|EES92142.1| dTMP kinase [Clostridium botulinum D str. 1873]
          Length = 210

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EG+GKTT + +++ +L+  N D   TREPGG   +E  R ++L     
Sbjct: 1   MKKGVFITLEGPEGSGKTTIVKMIEGYLKENNIDYISTREPGGINISEQIREIILDRKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  EA+++ A+R  H+   + PAL  GKI++CDRF+DSS AYQG         + S+
Sbjct: 61  EMDARTEALLYVASRRQHLSERVIPALKSGKIVICDRFIDSSLAYQGYARGIGIDEVMSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++   MP+ T+ LD+  +IGLKR+       +   ++  + + +  H+K R+ +  +
Sbjct: 121 NEFAIDGYMPNLTLYLDIDPEIGLKRISEN----DKREVNRLDLEKLDFHKKVREGYFKV 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +  P+R   +++      V  ++ N + 
Sbjct: 177 LKKFPNRIKKINANQPIDKVFEDVKNYLK 205


>gi|325690660|gb|EGD32661.1| thymidylate kinase [Streptococcus sanguinis SK115]
          Length = 212

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|296329529|ref|ZP_06872015.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305672726|ref|YP_003864397.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296153272|gb|EFG94135.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305410969|gb|ADM36087.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 212

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILIAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   ++PAL +G ++LCDRF+DSS AYQG         + S+ E
Sbjct: 62  DPRTEALLYAAARRQHLVEKVKPALEQGHVVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ ++MP  T+   +  + GLKR+    S  +    +  + + +  H K R+ + ++ +
Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIHANGSREK----NRLDLEKLSFHTKVREGYQELMK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R H VD++ S   V  ++L +V E ++K
Sbjct: 178 RFPKRFHPVDASQSKDLVVQDVLKVVNEALKK 209


>gi|256786952|ref|ZP_05525383.1| integral membrane protein with kinase activity [Streptomyces
           lividans TK24]
          Length = 1063

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 464 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 523

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 524 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 583

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 584 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 635

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V T + + + +++
Sbjct: 636 ADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 665


>gi|330878246|gb|EGH12395.1| thymidylate kinase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 210

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAGVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A S   V  ++  ++ EL++
Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206


>gi|330810988|ref|YP_004355450.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379096|gb|AEA70446.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 210

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   LQ    +V +TREPGGTP AE  R VLL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLQAAGIEVVLTREPGGTPLAERIREVLLAPIEEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G ++LCDRF DS+YAYQG         + +L+ 
Sbjct: 62  NPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSVERIAALEA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE +        R  FL  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARASAR------GRLDRFELEGQAFFNAVRNAFLSRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+A     V  ++  ++  L+++
Sbjct: 176 ADPARYLLIDAAQPLTQVQQSLDGLLPRLLER 207


>gi|302559329|ref|ZP_07311671.1| dTMP kinase [Streptomyces griseoflavus Tu4000]
 gi|302476947|gb|EFL40040.1| dTMP kinase [Streptomyces griseoflavus Tu4000]
          Length = 854

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +H++ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHIDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARINR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    +SV T I + + +++
Sbjct: 680 ADPGRYLVVDAGQEPESVTTVIRHRLDQVL 709


>gi|301060374|ref|ZP_07201237.1| dTMP kinase [delta proteobacterium NaphS2]
 gi|300445570|gb|EFK09472.1| dTMP kinase [delta proteobacterium NaphS2]
          Length = 212

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 110/208 (52%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T    +   L+R      +TREPGGTP     R +LLS G  +   
Sbjct: 1   MFITFEGIEGCGKSTQAKRIAARLERAGVSCILTREPGGTPVGNDIRQILLSSGNRDLPP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A R  H+ +V++PAL   K +LCDRF D++ AYQG            L E++
Sbjct: 61  LAELFLYEADRALHMASVVKPALAAKKWVLCDRFFDATTAYQGYARGQDLHMTARLNEMA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T +LD PV +GLKR   R +    A  D FE++    HE  R  + ++A+  
Sbjct: 121 SFGIKPDKTFLLDCPVSVGLKRALKRNAESRVAGQDRFEQEKTAFHEAVRHGYRELAKQN 180

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P R  +VD+  +   +  +I + +   +
Sbjct: 181 PHRFVVVDATQTEVRLEADIFSCLRNHI 208


>gi|77460373|ref|YP_349880.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1]
 gi|123603687|sp|Q3K8L5|KTHY_PSEPF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77384376|gb|ABA75889.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1]
          Length = 210

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+    +V +TREPGGTP AE  R VLL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVVLTREPGGTPLAERIREVLLAPVDEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G ++LCDRF DS+YAYQG         + +L+ 
Sbjct: 62  NPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSLERIAALET 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T+I DLPV+IGL R   R        LD FE +     E  R  FL  A 
Sbjct: 122 FVQGDLRPDLTLIFDLPVEIGLARASAR------GRLDRFELEGREFFEAVRNAFLKRAE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + P R   +D+      V  ++  ++  L++
Sbjct: 176 DDPARYVRIDAGQPLVKVQQSLDTLIPNLLE 206


>gi|325275807|ref|ZP_08141675.1| thymidylate kinase [Pseudomonas sp. TJI-51]
 gi|324099059|gb|EGB97037.1| thymidylate kinase [Pseudomonas sp. TJI-51]
          Length = 210

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+    DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L++
Sbjct: 62  AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ P  T++ DLPV++GL R   R        LD FE++     +  RQ +L  A+
Sbjct: 122 FVQGDLRPQLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFQAVRQAYLQRAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P R  ++D+A    +V   I  ++  +V++
Sbjct: 176 REPQRYSLLDAAQPLPAVQRAIDALLPAIVER 207


>gi|262283117|ref|ZP_06060884.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA]
 gi|262261369|gb|EEY80068.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA]
          Length = 212

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL +S EG +GAGK++ +  L   L+ K   V  TREPGG P +EA R V+L     
Sbjct: 1   MKRGLLVSLEGPDGAGKSSVLEALVPILEAKGQQVVTTREPGGVPISEAIREVILDQNNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         ++ L
Sbjct: 61  EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+       ++  ++  + + + +H++ RQ +L  
Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKN----KNREVNRLDLEGLEMHQRVRQGYLYS 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               P+R   +D++ + + V  + L ++ + +  +
Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVLNQHLNSK 211


>gi|302187273|ref|ZP_07263946.1| thymidylate kinase [Pseudomonas syringae pv. syringae 642]
          Length = 210

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206


>gi|327481307|gb|AEA84617.1| thymidylate kinase [Pseudomonas stutzeri DSM 4166]
          Length = 210

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   KGLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L+ 
Sbjct: 62  AVDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSLERIAQLET 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T+I DLPVD+GL R   R        LD FE++ +   E  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++D+  +  +V  ++  ++ EL+
Sbjct: 176 AAPSRYRVIDAGQALNAVQCDVEALIPELL 205


>gi|323351073|ref|ZP_08086730.1| thymidylate kinase [Streptococcus sanguinis VMC66]
 gi|322122797|gb|EFX94506.1| thymidylate kinase [Streptococcus sanguinis VMC66]
          Length = 212

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AE  R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAETIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|311896975|dbj|BAJ29383.1| putative thymidylate kinase [Kitasatospora setae KM-6054]
          Length = 1055

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG +GAGK+T    L  +++ K ++V +TREPGG+P  +  R ++L  G    
Sbjct: 515 KGYFIALEGGDGAGKSTQAQALAEWIRAKGHEVVLTREPGGSPIGQRLRALVLDVGNTGL 574

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HVENVIRPAL  G ++L DR++DSS AYQG         +  +  
Sbjct: 575 SHRAEALIYAADRAEHVENVIRPALERGAVVLTDRYMDSSIAYQGAGRDLAATEVARISR 634

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+       R         +  LD  E +    H++ R  FL +A 
Sbjct: 635 WATGGLVPDLTVVLDVDPTAARDRF--------TEALDRLESEPTEFHQRVRSGFLALAA 686

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD   S  +V T I + +   +
Sbjct: 687 ADPARYLVVDGTQSAAAVTTAIRHRLDREL 716


>gi|327470490|gb|EGF15946.1| thymidylate kinase [Streptococcus sanguinis SK330]
          Length = 212

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLAEQVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|157151481|ref|YP_001450818.1| thymidylate kinase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189030844|sp|A8AYF8|KTHY_STRGC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157076275|gb|ABV10958.1| thymidylate kinase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 212

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 116/215 (53%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL +S EG +GAGK++ +  L   L+ + + V  TREPGG P +EA R V+L     
Sbjct: 1   MKRGLLVSLEGPDGAGKSSVLEALVPILEAQGHQVVTTREPGGVPISEAIREVILDQNNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         ++ L
Sbjct: 61  EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  DL V+ GL R+       ++  ++  + + + +H++ RQ +L  
Sbjct: 121 NQYATDGLKPDLTLYFDLDVEEGLARIAKN----KNREVNRLDLEGLEMHQRVRQGYLYS 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               P+R   +D++ + + V  + L ++ + +  +
Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVLNQHLNSK 211


>gi|297572230|ref|YP_003698004.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932577|gb|ADH93385.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595]
          Length = 219

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 10/211 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FISFEG +GAGK+T +  L  +L+   Y V VTREPGGT      RH+LL  G  +  
Sbjct: 2   GMFISFEGGDGAGKSTQVEKLATWLREAGYGVVVTREPGGTELGAHIRHLLLHGG--DVS 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  H++  IRPAL  G+I++ DRF+DSS AYQG   S     +  L   
Sbjct: 60  PRAEALLYAADRAHHMDTKIRPALERGEIVITDRFMDSSIAYQGAARSLGKNEIRDLSLW 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V+  MPD T +LD+PV+ G  RV         +  D  E      H + R  FL +A +
Sbjct: 120 AVEGTMPDVTFLLDIPVETGQARV--------GSEQDRLEAAGAEFHARVRNEFLALAED 171

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             DR  ++D   +  S+A +I + V E + K
Sbjct: 172 HMDRWRVLDGTQTIDSIAQSIRHHVAEALAK 202


>gi|325292851|ref|YP_004278715.1| Thymidylate kinase [Agrobacterium sp. H13-3]
 gi|325060704|gb|ADY64395.1| Thymidylate kinase [Agrobacterium sp. H13-3]
          Length = 224

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 104/213 (48%), Positives = 143/213 (67%), Gaps = 2/213 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFISFEG EGAGK+T I  L   L+ + +DV VTREPGG+P AEA RHVLLS   + 
Sbjct: 4   KTGLFISFEGGEGAGKSTQIRTLAEALRDRGFDVIVTREPGGSPGAEAVRHVLLSGAAES 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EAI+FAAAR DHVE VIRPAL  G I+LCDRFLDSS  YQG   + +  F+++LQ
Sbjct: 64  FGVRMEAILFAAARNDHVEEVIRPALERGAIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++  V+P+ T+I D+  + GL R + R    E A  D FE++++  HEKRR+ +LDIA
Sbjct: 124 RVAIDGVVPELTLIFDIAAEKGLARARKR--ADEGAAPDRFEKEEIETHEKRREAYLDIA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +P RC IV++      V  ++++ V  L+++
Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214


>gi|327490146|gb|EGF21934.1| thymidylate kinase [Streptococcus sanguinis SK1058]
          Length = 212

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGNGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|114330554|ref|YP_746776.1| dTMP kinase [Nitrosomonas eutropha C91]
 gi|122314450|sp|Q0AIL5|KTHY_NITEC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|114307568|gb|ABI58811.1| thymidylate kinase [Nitrosomonas eutropha C91]
          Length = 215

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/217 (36%), Positives = 120/217 (55%), Gaps = 7/217 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGI+GAGK+TH++ L  FL+ K  +V VTREPG T   E  R +LL     
Sbjct: 1   MQRGKFITFEGIDGAGKSTHLAWLASFLRDKGLEVIVTREPGSTALGEQLRQLLLDHR-Q 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AE E ++  AAR +H++ VI PAL  G  ++ DRF D+S+AYQG         L+ L
Sbjct: 60  AMHAETETLLMFAARREHLDKVILPALERGAWVISDRFTDASFAYQGGGRGVPSARLEIL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++   +   PD T+  D+PV I  +RVQ+      +   D FE +  +  E+ RQ +L  
Sbjct: 120 EQWVQKGFSPDLTVYFDVPVTISRQRVQS------ARTADRFELEPDLFFERVRQAYLQR 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A+   +R  +VD + S + V T ++ +V +    + S
Sbjct: 174 AKQFSERIRVVDGSLSLEEVRTAMVEVVEKFWSAQAS 210


>gi|21221961|ref|NP_627740.1| integral membrane protein with kinase activity [Streptomyces
           coelicolor A3(2)]
 gi|4539560|emb|CAB38479.1| integral membrane protein with kinase activity [Streptomyces
           coelicolor A3(2)]
          Length = 1089

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL       
Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V T + + + +++
Sbjct: 680 ADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 709


>gi|330901144|gb|EGH32563.1| thymidylate kinase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 210

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+  +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAGQTLADVQASLDTLLPQLLE 206


>gi|85715533|ref|ZP_01046514.1| thymidylate kinase [Nitrobacter sp. Nb-311A]
 gi|85697728|gb|EAQ35604.1| thymidylate kinase [Nitrobacter sp. Nb-311A]
          Length = 230

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 3/211 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEG EG+GK+T I +L   L        VTREPGG+P AE  RH++LS     
Sbjct: 11  QRGRFITFEGGEGSGKSTQIKILAERLLAAKQHAIVTREPGGSPGAEIIRHLVLSGVGKL 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G +AE ++FAAAR DHV  VIRPAL +G  +LCDRF DS+  YQG+  +     L++++
Sbjct: 71  LGVDAETLLFAAARDDHVRTVIRPALEQGVWVLCDRFADSTRVYQGQLGNVLPGVLNAME 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++ ++ PD T+ILD+PV++GL+R   R   R S   D FE +D+  H K R  + +IA
Sbjct: 131 RVTIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDLAFHRKLRDAYREIA 187

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            N P RC ++D+     +VA  I   + E +
Sbjct: 188 ANDPQRCVVIDADTDLDTVAARIWAALRERM 218


>gi|323342269|ref|ZP_08082501.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463381|gb|EFY08575.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 207

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 118/208 (56%), Gaps = 6/208 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF+SFEG +G+GKTT   ++  + ++KN  V  TREPGG   +E  R ++L    +E   
Sbjct: 3   LFVSFEGPDGSGKTTITKIVSEYFEKKNQPVLCTREPGGIRISEKIRELILDPEHEEMDD 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  H+   I+PAL  G++++CDRF+DSS AYQG         +  +   +
Sbjct: 63  RTEALLYAASRRQHLIEKIKPALGRGELVICDRFVDSSLAYQGYARGIGIDDVWDINMFA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   +PD TI LDL  + GLKR+  R         D  E +  + HEK  Q + ++ R  
Sbjct: 123 IDGFLPDLTIFLDLKPEEGLKRIGVR------GYKDRLELEGDVFHEKVYQGYQEVIRRF 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P+R  IVD+A S + VA +++ I+   +
Sbjct: 177 PNRIKIVDAAQSIEDVAADVIKIIETQL 204


>gi|289671976|ref|ZP_06492866.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5]
          Length = 210

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+  +   V  ++  ++ +L++
Sbjct: 176 AEPARYRLVDAGQTLADVQDSLDTLLPQLLE 206


>gi|271970386|ref|YP_003344582.1| dTMP kinase [Streptosporangium roseum DSM 43021]
 gi|270513561|gb|ACZ91839.1| dTMP kinase [Streptosporangium roseum DSM 43021]
          Length = 688

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+FEG EG+GKTT   LL  +L+ + +DV  TREPG T      R +LL       
Sbjct: 467 RGMFIAFEGGEGSGKTTQSRLLAIWLRDQGFDVVQTREPGSTKVGMRLRAILLDAVHQGL 526

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A +EA+++AA R +HVE VIRPAL  G +++ DR++DSS AYQG   + +   +  +  
Sbjct: 527 SARSEALLYAADRAEHVEKVIRPALYRGSMVISDRYVDSSLAYQGAGRALEPGDVARINA 586

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T+++D P  +GL R+            D  E + +  HE+ R+ F  +A 
Sbjct: 587 WATGGLVPDLTVLIDTPPSVGLTRL--------GGAADRIESEPLEFHERVRREFRSLAA 638

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P+R  +VD   + + ++  I + V E++
Sbjct: 639 AAPERYLVVDGTLAQEQISLLIHDRVREVL 668


>gi|104780789|ref|YP_607287.1| thymidylate kinase [Pseudomonas entomophila L48]
 gi|166223104|sp|Q1ICY2|KTHY_PSEE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|95109776|emb|CAK14481.1| thymidylate kinase [Pseudomonas entomophila L48]
          Length = 210

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   SGLFITLEGPEGAGKSTNREYLAARLREQGVDVVMTREPGGTPLAERIRELLLAPSEEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L+ 
Sbjct: 62  AVDTELLLMFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAILES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  A 
Sbjct: 122 FVQGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAG 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            QP R  ++D+A    +V   I  ++  ++++
Sbjct: 176 QQPQRYSLLDAAQPLAAVQRAIDALLPGILER 207


>gi|254710078|ref|ZP_05171889.1| thymidylate kinase [Brucella pinnipedialis B2/94]
          Length = 211

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EGAGK+T I+LL   L+   +D  +TREPGG+P AEA RHV+LS   + +G 
Sbjct: 1   MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG   +    ++ +++ I+
Sbjct: 61  AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MPD T++LD+    GL R   R   R S   D FE++D+ +HE RRQ FL+IAR +
Sbjct: 121 IDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P RC ++D+  S + +A  I ++V  ++ ++
Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208


>gi|146282956|ref|YP_001173109.1| thymidylate kinase [Pseudomonas stutzeri A1501]
 gi|166223107|sp|A4VMR6|KTHY_PSEU5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145571161|gb|ABP80267.1| thymidylate kinase [Pseudomonas stutzeri A1501]
          Length = 210

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +  
Sbjct: 2   KGLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         +  L+ 
Sbjct: 62  AVDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSLERIAQLET 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T+I DLPVD+GL R   R        LD FE++ +   E  R  +L  A 
Sbjct: 122 FVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQRAE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++D+  +  +V  ++  ++ EL+
Sbjct: 176 AAPSRYRVIDAGQALNAVQCDVEALIPELL 205


>gi|323701668|ref|ZP_08113340.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
 gi|323533441|gb|EGB23308.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574]
          Length = 215

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI FEG++G+GKTT +SLL ++L   +   + TREPGGTP  E  R +LL+    +  
Sbjct: 11  GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPGGTPLGEKIRELLLNPDFIDMQ 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  EA+++AAAR   V   IRP L +G ++LCDR++DSS AYQG        FL  + ++
Sbjct: 71  SRTEALLYAAARAQLVAQEIRPRLQQGTVVLCDRYIDSSLAYQGYGRGMDIDFLIKINQL 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + P   I+LDLP + GL R       R+    D  E + +  H + R  +L++AR 
Sbjct: 131 GTGGLNPQLVILLDLPPEEGLIR------SRKVGPADRLENEALDFHRRVRAGYLELARK 184

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            PDR  ++D+  S Q++   I  +V  +V
Sbjct: 185 NPDRYLVLDARESIQTLHQEICRVVGGMV 213


>gi|300172669|ref|YP_003771834.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887047|emb|CBL91015.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811]
          Length = 214

 Score =  262 bits (670), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 5/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ + +L   L+     ++  TREPGG P +EA R +L     
Sbjct: 1   MTKPLFITFEGPEGAGKTSVLEILISELKPLLGDELITTREPGGNPISEAIRAILQPAED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+  +I PAL  GK+++ DR++DSS AYQG         +  
Sbjct: 61  NGMDERTEALLYTAARRQHLVEIILPALKSGKVVISDRYIDSSLAYQGGGRGLGVDNIWQ 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + + + +MPD TI  D+P ++GL RV+          +D  +++++  H+  RQ +L 
Sbjct: 121 INQFATEGLMPDLTIYFDVPPELGLARVKAN----RQGKIDRLDKENLSFHQTVRQTYLQ 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +  +  DR  I+D+A S   V  +   ++ + ++ R
Sbjct: 177 LQHDFSDRIKIIDAAQSLDQVVADTRELLLKTLKTR 212


>gi|256397499|ref|YP_003119063.1| thymidylate kinase [Catenulispora acidiphila DSM 44928]
 gi|256363725|gb|ACU77222.1| thymidylate kinase [Catenulispora acidiphila DSM 44928]
          Length = 901

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61
           +G F+SFEG +G+GK+T + LL  +L+   ++V VTREPGGTP     R+++L     D 
Sbjct: 496 TGTFLSFEGGDGSGKSTQLDLLADWLRGSGHEVVVTREPGGTPLGTKLRNIVLDAHNADV 555

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R DHVE V+RPAL  G +++ DR++DSS AYQG   +     ++ L 
Sbjct: 556 ISPRAEALIYAADRADHVERVVRPALERGAVVITDRYVDSSLAYQGAGRALSAREVELLS 615

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + + Q +MPD TI++DL      +R             D  E + V  H + R  +L++A
Sbjct: 616 QWATQGLMPDVTILMDLDPLEAARR--------RKTPADRLELESVDFHRRVRNRYLELA 667

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+R  ++++    + +A  I   +   +
Sbjct: 668 TAEPERFIVINAMEPIEQIAGRIRARLEGRI 698


>gi|307328251|ref|ZP_07607429.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113]
 gi|306886085|gb|EFN17093.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113]
          Length = 1100

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 62/210 (29%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI  EG +G+GK+T +  L  +++ K ++V VTREPG T   +  R +LL       
Sbjct: 508 TGFFIVIEGGDGSGKSTQVEALAEWIRAKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAATEIARISR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHQRVRSGFLALAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V + + + + +++
Sbjct: 680 ADPARYLVVDAGQLPEAVTSVVRHRLDQML 709


>gi|327462078|gb|EGF08407.1| thymidylate kinase [Streptococcus sanguinis SK1057]
 gi|328946592|gb|EGG40730.1| thymidylate kinase [Streptococcus sanguinis SK1087]
          Length = 212

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FL+     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLAERVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|170720716|ref|YP_001748404.1| thymidylate kinase [Pseudomonas putida W619]
 gi|259494278|sp|B1J4Z5|KTHY_PSEPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169758719|gb|ACA72035.1| dTMP kinase [Pseudomonas putida W619]
          Length = 207

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 6/210 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EGAGK+T+   L   L+ +  DV +TREPGGTP AE  R +LL+   +   A
Sbjct: 1   MFITLEGPEGAGKSTNRDYLAARLREQGLDVVLTREPGGTPLAEKVRELLLAPSDEVMAA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L++  
Sbjct: 61  DTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAALEQFV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             E+ PD T++ DLPV++GL R   R        LD FE++     E  RQ +L  AR +
Sbjct: 121 QGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRARRE 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R  ++D+A   ++V   I  ++  ++++
Sbjct: 175 PQRYDLLDAAQPLEAVQRAIDALLPGILER 204


>gi|300087976|ref|YP_003758498.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527709|gb|ADJ26177.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 207

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 7/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T   LL   L        +TREPGGTP  E    +L    + 
Sbjct: 1   MKQGKFITFEGCEGAGKSTQAGLLAGMLASNGMKTILTREPGGTPLGEEISRLLKWGKIG 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A +E ++F A+R + V  VI PAL  GKI++CDRF DSS  YQG         +  +
Sbjct: 61  DIDALSELLLFNASRAELVFTVIEPALKAGKIVICDRFTDSSLVYQGGGRGLSTETVIRV 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+ + + PD TI+LD+P+  G  R  N       +  D FE++    H+  RQ +L +
Sbjct: 121 NDIATRGLKPDMTILLDIPISTGQHRKSN-------SVADRFEQEADEFHKSVRQSYLAL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A   P+R  +V+   S   V   +   V  L++
Sbjct: 174 AEADPERWKVVNGTLSRSEVTEAVWKHVKALLE 206


>gi|329894944|ref|ZP_08270743.1| Thymidylate kinase [gamma proteobacterium IMCC3088]
 gi|328922673|gb|EGG30008.1| Thymidylate kinase [gamma proteobacterium IMCC3088]
          Length = 212

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 6/217 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG GK+T ++L+K  L+++   V VTREPGGT  AE  R VLLS   +
Sbjct: 1   MRKGYFITFEGGEGTGKSTQLALVKEALEQRGIKVCVTREPGGTELAEEIRRVLLSPRNE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++  AAR  H+  VI PA+  G+ +LCDRF D++YAYQ          +  L
Sbjct: 61  TVDPTTELLLMFAARAQHLAQVILPAVDRGEWVLCDRFTDATYAYQQGGRGVDEDKIAIL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +      PD T++ D P++I L+R+++R        LD FE++ +   ++ R  +L  
Sbjct: 121 ERLVQMGFNPDLTLLFDAPIEISLQRMRDR------GALDRFEQEGLEFMKRVRSTYLTR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           AR + +R  ++D+  +   V  ++   +  LV   VS
Sbjct: 175 ARVESERFRVIDATATVDDVRASVNLHLEPLVNAWVS 211


>gi|315605270|ref|ZP_07880316.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313087|gb|EFU61158.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 268

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 9/223 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+FEG +G+GK+T I  ++ +   +  +V VTREPGGT      R ++ + G ++ 
Sbjct: 6   RGVFITFEGGDGSGKSTQILAVRDWFASRGREVVVTREPGGTELGAEIRRLVQN-GPEDV 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA R  HV  V+ PAL  G ++L DR++DSS AYQG   S     + SL  
Sbjct: 65  DARTEALLYAADRAYHVTTVVAPALERGAVVLGDRYIDSSLAYQGAARSLGVDEISSLSA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + P  T +LDLP ++GL+R         +   D  ER+ +  HE+ R  +L +A 
Sbjct: 125 WATRGLYPSLTFLLDLPPEVGLRR--------HTDAPDRMERESMDFHERVRHEYLRLAD 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
            +PDR  ++D+  + + V + I  ++ E  +  V+ +    D+
Sbjct: 177 AEPDRIVVIDAVGTVEEVFSEIRGVLVERFEGGVATIDEAADV 219


>gi|254428585|ref|ZP_05042292.1| thymidylate kinase [Alcanivorax sp. DG881]
 gi|196194754|gb|EDX89713.1| thymidylate kinase [Alcanivorax sp. DG881]
          Length = 208

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG EGAGK++++  L   L+     V V+REPGGT  AE+ R VLL+ G +  
Sbjct: 2   SGRFITLEGGEGAGKSSNLEWLADALRAAGKTVTVSREPGGTALAESIRGVLLAPGDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR  H+E  IRPAL  G+ +LCDRF+D+++AYQG         +  L+ 
Sbjct: 62  ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFVDATWAYQGAGRGLDSAAIADLES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +++  PD T++ D+PV++G+ R   R      A LD  E++D    E+ RQ +L  A 
Sbjct: 122 LVIRDTRPDMTVLFDVPVEVGMARAGKR------AALDRIEQEDRAFFERIRQCYLARAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P R   VD+     SV   +  IV E++
Sbjct: 176 QEPSRFRTVDAGQPLGSVQQQLGAIVEEML 205


>gi|309390261|gb|ADO78141.1| thymidylate kinase [Halanaerobium praevalens DSM 2228]
          Length = 208

 Score =  261 bits (669), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGIEG+GKTT I+ L  +L++  +DV ++REPGGT   +  R +LL    D
Sbjct: 1   MAEGFFITFEGIEGSGKTTQINRLADYLRKNEHDVLISREPGGTELGQKIRKILLDPHFD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E +++AA R  HV+  I+PAL  GKI++ DRF+DS+ AYQ       +  +  +
Sbjct: 61  TMDYKTEILLYAADRAQHVKEKIKPALKAGKIVISDRFVDSNLAYQAAGRGLDYEQVYQI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +    PD T ILD+ +  GL+R +    L      D  ER+    H++ R+ +L++
Sbjct: 121 NNWVIGSTWPDLTFILDIDIKKGLERARK---LSFDQAGDRLEREVDDFHQRVREAYLEM 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A    +R  ++++A S   +  +I NI+   +
Sbjct: 178 AVA--ERFCLINAARSIVEIEKDIKNIIARRL 207


>gi|71735430|ref|YP_273889.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257487544|ref|ZP_05641585.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289624541|ref|ZP_06457495.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289649352|ref|ZP_06480695.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|123637325|sp|Q48L36|KTHY_PSE14 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71555983|gb|AAZ35194.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320327699|gb|EFW83707.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330869264|gb|EGH03973.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 210

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|194018013|ref|ZP_03056620.1| thymidylate kinase [Bacillus pumilus ATCC 7061]
 gi|194010350|gb|EDW19925.1| thymidylate kinase [Bacillus pumilus ATCC 7061]
          Length = 212

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+FEG EGAGKTT I  +   ++R+ Y V  TREPGG   AE  R V+L+    + 
Sbjct: 2   SGMFITFEGPEGAGKTTVIRKVYEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  H+   + PAL  G+ +LCDRF+DSS AYQG         + S+ +
Sbjct: 62  DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQGYARGLGIDQVRSIND 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++   MP  TI   +  + GLKR+       +    +  + + +  H+  R+ +  +  
Sbjct: 122 FAIDGTMPQMTIYFSITPEEGLKRIHANQGREK----NRLDMETLNFHQLVREGYELLIA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H+VD++   Q V   +L ++ + ++K
Sbjct: 178 QSPERFHVVDASQPMQDVYEEVLRVIQDTLKK 209


>gi|298486225|ref|ZP_07004288.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159232|gb|EFI00290.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 210

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDALLPQLLELR 208


>gi|324991362|gb|EGC23295.1| thymidylate kinase [Streptococcus sanguinis SK353]
          Length = 212

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLTERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|52078523|ref|YP_077314.1| thymidylate kinase [Bacillus licheniformis ATCC 14580]
 gi|52783885|ref|YP_089714.1| thymidylate kinase [Bacillus licheniformis ATCC 14580]
 gi|319648552|ref|ZP_08002766.1| thymidylate kinase [Bacillus sp. BT1B_CT2]
 gi|81667281|sp|Q65PJ3|KTHY_BACLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52001734|gb|AAU21676.1| thymidylate kinase [Bacillus licheniformis ATCC 14580]
 gi|52346387|gb|AAU39021.1| Tmk [Bacillus licheniformis ATCC 14580]
 gi|317389319|gb|EFV70132.1| thymidylate kinase [Bacillus sp. BT1B_CT2]
          Length = 212

 Score =  261 bits (668), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 75/214 (35%), Positives = 122/214 (57%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLFI+FEG EGAGKTT +      L +  + V  TREPGG   +E  R V+L+    
Sbjct: 1   MN-GLFITFEGPEGAGKTTILQAAADQLTKNGHSVLATREPGGIEISERIREVILNPSHT 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + EA+++AAAR  H+   ++PAL EGKI+LCDRF+DSS AYQG         + S+
Sbjct: 60  AMDPKTEALLYAAARRQHLVEKVKPALEEGKIVLCDRFIDSSLAYQGYARGLGIDEVFSV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++  +MP+ TI  D+  + G+KR+     L ++   +  + + +  H+  ++ + ++
Sbjct: 120 NQFAIGSLMPNVTIYFDIDPEEGIKRI----DLNDAREKNRLDLEKLHFHQLVQKGYEEV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               P R  IVD++ S + V   + NI+ E +++
Sbjct: 176 MNRFPGRFRIVDASQSVELVLKRVNNIIEEALKE 209


>gi|312142724|ref|YP_003994170.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus']
 gi|311903375|gb|ADQ13816.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus']
          Length = 208

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGIEG+GK+T I LL  +L+++  +V +TREPGGT   +  R +LL    +
Sbjct: 1   MGEGFFITFEGIEGSGKSTQIKLLGDYLKKEGKEVVITREPGGTELGKKIRQLLLDPAHE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E +++ A R  H ++VI+PAL  GK+++ DRF DS+ AYQ       +  +  +
Sbjct: 61  DMDYRTEILLYTADRAQHFKDVIKPALKAGKVVISDRFADSNLAYQAAGRGLDYELVYKI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD T +LD+ +  GLKR +           D  ER+    H++ R+ +L++
Sbjct: 121 NDWVIDSRWPDLTFVLDVAIAEGLKRARASSFDLNG---DRLEREADSFHQRVRKAYLEM 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +   DR  +VD   + + V   + NI+   +
Sbjct: 178 VKR--DRFALVDGNLAEEEVHQEVKNIITRRL 207


>gi|213691095|ref|YP_002321681.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|254808279|sp|B7GT80|KTHY_BIFLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|213522556|gb|ACJ51303.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457150|dbj|BAJ67771.1| thymidylate kinase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 233

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 11/218 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL     G 
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTVLGKAIRQLLLHGVDGGA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ          + S
Sbjct: 62  VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++PD T +LD+   +   R+++          D  E        + RQ FLD
Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHNRLEH--------AEDRMESAGSDFQSRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A  +P+R H++D++ S + V + I   +  L++  V+
Sbjct: 174 LAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211


>gi|239825610|ref|YP_002948234.1| thymidylate kinase [Geobacillus sp. WCH70]
 gi|259494272|sp|C5D352|KTHY_GEOSW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|239805903|gb|ACS22968.1| thymidylate kinase [Geobacillus sp. WCH70]
          Length = 210

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 4/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F SFEG +GAGKTT I+ L+ FL+ K +DV +TREPGG   AE  R ++L+    E 
Sbjct: 2   KGRFFSFEGPDGAGKTTMITKLESFLREKGFDVLLTREPGGVRIAEEIRSIILNPKHTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PA+  GKI+LCDRF+DSS AYQG         +  + +
Sbjct: 62  DGRTEALLYAAARRQHLLEKIIPAIKAGKIVLCDRFVDSSLAYQGFARGLGIDEILQINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++    P  TI  D+   IGL+R+Q      +   ++  + + +  H K R+ +L IA 
Sbjct: 122 FAIDGFFPSLTIYFDIDPKIGLERIQKN----KQREINRLDMESLSFHYKVREGYLKIAE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              DR  ++D++     V    +  V + ++ R
Sbjct: 178 RFSDRIIVIDASKPVDEVFAMTIAAVMDQIEGR 210


>gi|307942275|ref|ZP_07657626.1| thymidylate kinase [Roseibium sp. TrichSKD4]
 gi|307774561|gb|EFO33771.1| thymidylate kinase [Roseibium sp. TrichSKD4]
          Length = 229

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 1/214 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG EGAGKTT I+ LK+ L+     + +TREPGG+P AE  R +LLS    + 
Sbjct: 2   TGQFITFEGGEGAGKTTQIARLKQRLEELGKTICLTREPGGSPGAEKIREMLLSGAARKL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ VI PAL+ G  ++CDRF DS+  YQGE     +  LD L+ 
Sbjct: 62  GPRGEAMLFAAARADHVDGVIAPALVRGDWVICDRFADSTRVYQGEA-GVDNETLDLLET 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+V    PD TI++D+P DIGL RV +R    +S   D FE   +  HE+RR +FLD+A+
Sbjct: 121 IAVAGTRPDLTILIDIPADIGLSRVSSRSKTDDSGGPDRFEADTIATHERRRSLFLDLAK 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            QP+R  +VD  H    VA  I   V    +  +
Sbjct: 181 QQPERFVVVDGRHDPDHVAGEIWWAVHRHFKDLL 214


>gi|323697768|ref|ZP_08109680.1| thymidylate kinase [Desulfovibrio sp. ND132]
 gi|323457700|gb|EGB13565.1| thymidylate kinase [Desulfovibrio desulfuricans ND132]
          Length = 213

 Score =  261 bits (667), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 1/206 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T I  ++ + + +  +V +T EPGG+      R +LL     E   
Sbjct: 1   MFITFEGIEGTGKSTQIGRVRDYFEARGREVLLTLEPGGSRIGVELRKMLLHVDNREITP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  ++ A R  HV  VIRPAL  GK++LCDRF DS+  YQG         L  L E++
Sbjct: 61  ITELFLYLADRAQHVGQVIRPALAAGKVVLCDRFADSTIVYQGYGRGLDTSMLRELNEVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V  + PD TI+LD+  +IGLKR   R      A  +  FE + +  H++ R+ +L  A  
Sbjct: 121 VNGLWPDLTIVLDIDPEIGLKRATLRNIEDGKAKEEGRFEAEHLSFHKRIREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
              R  +VD+A +   V   I  ++ 
Sbjct: 181 NHRRMSVVDAAGTPDQVFDQIRAVIE 206


>gi|307826061|ref|ZP_07656274.1| thymidylate kinase [Methylobacter tundripaludum SV96]
 gi|307732900|gb|EFO03764.1| thymidylate kinase [Methylobacter tundripaludum SV96]
          Length = 223

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GKTT+++ +K +L++ N  V VTREPGGT  AE  R +LL    +
Sbjct: 1   MIRGKFITLEGCEGVGKTTNMAFIKDYLEQHNISVVVTREPGGTKLAEKIRQLLLDNKSE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +AE ++  AAR  H+++VI PAL +GK +LCDRF D++YAYQG   + +   +  L
Sbjct: 61  TISEQAELLMMFAARAQHIKHVIEPALAQGKWVLCDRFTDATYAYQGGGRNMKISTIKWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +    + PD T++LD P++IG+ RV+ R        LD FE + +   E  R+ +L  
Sbjct: 121 ENLVQGTLRPDLTLLLDAPIEIGIARVRER------GALDRFELEKISFFENVRRAYLLQ 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P+R  ++ +      V   I +++  L+
Sbjct: 175 AELYPERIKLIKANQPLIDVQRAITDVIRTLL 206


>gi|226356637|ref|YP_002786377.1| dTMP kinase (thymidylate kinase) [Deinococcus deserti VCD115]
 gi|226318627|gb|ACO46623.1| putative dTMP kinase (thymidylate kinase) [Deinococcus deserti
           VCD115]
          Length = 218

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 113/207 (54%), Gaps = 7/207 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEG EGAGK+T I+ L   L+ ++    VTREPGGTP     R VLL   +      
Sbjct: 12  FISFEGPEGAGKSTQIARLVARLEERSVPHTVTREPGGTPLGTRVREVLLDPDLS-IDPL 70

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++++A+R   V +VIRPAL +G  ++CDR+ DSS AYQG         L  L   + 
Sbjct: 71  PEFLLYSASRAQLVTHVIRPALTQGHTVICDRYFDSSLAYQGAGRGLPVRLLRDLTREAT 130

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LDL   +GL+RV +R         D  ER D+  H++ RQ FLD+A  +P
Sbjct: 131 GGLTPDLTVLLDLDPALGLQRVASR------GQADRLERADLGFHQRVRQGFLDLAAAEP 184

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212
            R  ++D+  S   +A  I   V   +
Sbjct: 185 GRFLVLDATRSVDELAREIWTAVERWL 211


>gi|329889614|ref|ZP_08267957.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568]
 gi|328844915|gb|EGF94479.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568]
          Length = 208

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGKTT   LL   L+ +  DV  TREPGG+P AE  R++ +S   D
Sbjct: 1   MQRGRFITFEGGEGAGKTTQARLLVERLRARGLDVLQTREPGGSPGAEEIRNIAVSGEAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A  E ++  AAR DH+E  I PAL  G+ ++CDRF DSS  YQG    +    +++L
Sbjct: 61  RWSARTETLLMYAARSDHLERTILPALEAGRWVVCDRFADSSRVYQGAGGGTPESLIEAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V    PD T++ DLPV++GL R   R           FE K +  H+K R  FL +
Sbjct: 121 DDAVVNGDQPDLTLVFDLPVEVGLDRAFGRGLFET-----RFESKGLAFHQKLRDGFLKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P+RC ++D+      V+  +  +V E +
Sbjct: 176 AERHPERCVVLDATGEVDEVSARLWAVVEERL 207


>gi|78485063|ref|YP_390988.1| thymidylate kinase [Thiomicrospira crunogena XCL-2]
 gi|78363349|gb|ABB41314.1| thymidylate kinase [Thiomicrospira crunogena XCL-2]
          Length = 219

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 1/210 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG F++ EG EG GK+T++  ++++L   N DV VTREPGGT  +EA R +LL     E 
Sbjct: 11  SGKFLTLEGTEGGGKSTNLVFIQQWLADHNIDVVVTREPGGTAVSEAVREILLDKQYSEM 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR  H++  I PAL  GK ++ DRF D+SYAYQG      +  +  ++ 
Sbjct: 71  TPETELLLMFAARNQHLQEKILPALAAGKWVVSDRFTDASYAYQGGARGIAYDRIAEIEN 130

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              Q   PD T + DLP++ G+KRV  R  L     +D FE++ +   EK R  +L  A 
Sbjct: 131 WVQQGCYPDMTFVFDLPIEEGMKRVAARSKL-SGQAIDRFEQEKMEFFEKVRAAYLYRAE 189

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++++A     V   + + +  L+
Sbjct: 190 QAPQRYCVLNAARPLNEVQEKLASQLESLL 219


>gi|293194284|ref|ZP_06609970.1| dTMP kinase [Actinomyces odontolyticus F0309]
 gi|292819731|gb|EFF78745.1| dTMP kinase [Actinomyces odontolyticus F0309]
          Length = 271

 Score =  261 bits (667), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+FEG +G+GK+T I  ++ + + +  +V VTREPGGT      R ++ + G ++ 
Sbjct: 4   RGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRRLVQN-GPEDV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA R  HV  VI PAL  G ++L DR++DSS AYQG   S     + SL  
Sbjct: 63  DARTEALLYAADRAYHVATVIAPALERGAVVLGDRYIDSSLAYQGAARSLGVDEIASLSA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + P  T +LDLP ++GL R         +   D  ER+ +  HE+ R  +L +A 
Sbjct: 123 WATRGLYPSLTFLLDLPPEVGLHR--------HTDAPDRMERESMDFHERVRHEYLRLAD 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +PDR  ++D+  +   V + I  ++ E  +
Sbjct: 175 AEPDRIVVIDAVGTVDEVFSEIRGVLVERFE 205


>gi|121534353|ref|ZP_01666177.1| dTMP kinase [Thermosinus carboxydivorans Nor1]
 gi|121307123|gb|EAX48041.1| dTMP kinase [Thermosinus carboxydivorans Nor1]
          Length = 210

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 7/214 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG +GAGKTT ++LL  +L+ + + V  TREPGGTP  +A R +LL        
Sbjct: 3   GLFITFEGADGAGKTTQLALLADYLRAQGWPVRCTREPGGTPLGDAIRALLLDPANARMA 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++ AAR  HV  VI PAL  G+I+L DR+ DS+  YQG         L ++   
Sbjct: 63  PRTEALLYMAARAQHVAEVIAPALARGEIVLSDRYADSTIVYQGVARQLPEHELAAINAF 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + PD TI+LD   ++   R+  R         D  ER+    HE+ RQ FL +A  
Sbjct: 123 ATGGLEPDLTILLDCRQEVLSGRMAGR------GAKDRIEREAARFHEQVRQGFLRLAAA 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             DR  ++++  S Q+V   ++  V + + +R S
Sbjct: 177 -SDRFCVIEADGSVQAVHARVIAAVQQFLDRRGS 209


>gi|302038227|ref|YP_003798549.1| thymidylate kinase [Candidatus Nitrospira defluvii]
 gi|300606291|emb|CBK42624.1| Thymidylate kinase [Candidatus Nitrospira defluvii]
          Length = 241

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+ EG EG GK+T   LL   L+ + YD   TREPGGTP AE  R VLL    +  
Sbjct: 10  RGLFITLEGTEGCGKSTQAKLLGEHLRNQGYDTVETREPGGTPLAEKIRSVLLDRADEPV 69

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E EA +  AAR  HV  VI PAL  G I+LCDRF+DS+ AYQG         L+ L  
Sbjct: 70  APETEAFLVLAARRQHVAQVIEPALARGSIVLCDRFIDSTLAYQGYARGLDIATLERLNR 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++   +MPD T++ DLPV  GL R       R +A L+  +R+ +  H + R  FLD+A+
Sbjct: 130 LATHTLMPDLTLVFDLPVSTGLAR------RRSAAELNRLDRESLRFHRRVRAGFLDLAK 183

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  IV +  S ++VA  +  IV  L+ +
Sbjct: 184 RHPRRIQIVSARASRETVARAVARIVTPLLDR 215


>gi|66044897|ref|YP_234738.1| thymidylate kinase [Pseudomonas syringae pv. syringae B728a]
 gi|75502746|sp|Q4ZVX2|KTHY_PSEU2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|63255604|gb|AAY36700.1| Thymidylate kinase [Pseudomonas syringae pv. syringae B728a]
          Length = 210

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ AR
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V   +  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206


>gi|308176312|ref|YP_003915718.1| dTMP kinase [Arthrobacter arilaitensis Re117]
 gi|307743775|emb|CBT74747.1| dTMP kinase [Arthrobacter arilaitensis Re117]
          Length = 217

 Score =  260 bits (666), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 2/211 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI FEG +GAGKTT +++ +++L+ +   V  TREPGGT  +E  R ++L  G  E
Sbjct: 9   TRGLFIVFEGGDGAGKTTQVAMAQQWLESRGATVRTTREPGGTQISEELRSLVLEHGHGE 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++++AAR  HV+ VIRP+L  G  ++CDRF+DSS AYQG         + S+ 
Sbjct: 69  IDARTEALIYSAARAAHVQQVIRPSLEAGTHIICDRFVDSSLAYQGMGRELGFAAVASIN 128

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD TIILD+  + G  R        E +  D  E +    HE+ R  FL++A
Sbjct: 129 DFATGGLKPDVTIILDISAEHGRARRIAASGGVEDS--DRLEAEPDDFHERIRNAFLELA 186

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  ++D+  S + +  +I+  +  L+
Sbjct: 187 AQDPQRYLVLDATASVEQLHQSIVEHLAGLL 217


>gi|90424201|ref|YP_532571.1| thymidylate kinase [Rhodopseudomonas palustris BisB18]
 gi|122476154|sp|Q214D4|KTHY_RHOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|90106215|gb|ABD88252.1| thymidylate kinase [Rhodopseudomonas palustris BisB18]
          Length = 230

 Score =  260 bits (666), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEG EGAGK+T I LL   L        +TREPGG+P AE  RH++LS     
Sbjct: 11  TRGRFITFEGGEGAGKSTQIKLLAERLNAGRIRCVLTREPGGSPGAEIIRHMILSGIGSL 70

Query: 62  FG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            G  EAE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG+  +     L+++
Sbjct: 71  IGGTEAETLLFAAARDDHVHTVIEPALAQGSWVLCDRFTDSTRAYQGQMGAVAPALLNAM 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q +++ ++ PD TIILD+PV+IG+KR + R   R +A  D FE + +  H K R+ +  I
Sbjct: 131 QRVTIGDLKPDLTIILDVPVEIGVKRARLR---RGAAEPDRFEAESLEFHRKLREAYRQI 187

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A ++P RC ++D+    + VA  +   V + +
Sbjct: 188 AADEPQRCVLIDANAKVKPVAAKVWAAVQKRL 219


>gi|330973853|gb|EGH73919.1| thymidylate kinase [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 210

 Score =  260 bits (666), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELMLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ AR
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+A +   V   +  ++ +L++
Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206


>gi|90021281|ref|YP_527108.1| thymidylate kinase [Saccharophagus degradans 2-40]
 gi|89950881|gb|ABD80896.1| thymidylate kinase [Saccharophagus degradans 2-40]
          Length = 208

 Score =  260 bits (666), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +++G FI+ EG EG GK+T+I L+K  LQ+   ++ VTREPGGTP AE  R+VLL+   +
Sbjct: 2   ISTGKFITVEGTEGVGKSTNIELIKTLLQQAGIELVVTREPGGTPLAEELRNVLLANRDE 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F   AE +V  AAR  H+  VI+PAL  GK +L DRF D+++AYQG+        +  L
Sbjct: 62  NFDPLAELLVVFAARAQHINQVIKPALAAGKWVLSDRFTDATFAYQGKGRGLPIQAILQL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++  Q + PD T +LD+ V +GL+R + R        LD FE + +   EK R  + + 
Sbjct: 122 EQMVQQGLQPDATFLLDIDVQVGLERARER------GELDRFENEHITFFEKVRAGYHER 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R  ++++  S ++V  ++   V +L+
Sbjct: 176 VAATPERFMVINAGQSLEAVQQDVTLAVEKLL 207


>gi|330985597|gb|EGH83700.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 210

 Score =  260 bits (666), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFADATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|154508479|ref|ZP_02044121.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798113|gb|EDN80533.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC
           17982]
          Length = 270

 Score =  260 bits (666), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+FEG +G+GK+T I  ++ + + +  +V VTREPGGT      R ++ + G ++ 
Sbjct: 4   RGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRRLVQN-GPEDV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA R  HV  VI PAL  G ++L DR++DSS AYQG   S     + SL  
Sbjct: 63  DARTEALLYAADRAYHVATVIAPALERGAVVLADRYIDSSLAYQGAARSLGVDEIGSLSA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + P  T +LDLP ++G +R         +   D  ER+ +  HE+ R  +L +A 
Sbjct: 123 WATRGLYPSLTFLLDLPPEVGARR--------RTDAPDRMERESMDFHERVRHEYLRLAD 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +PDR  ++D+  +   V + I  ++ E  +
Sbjct: 175 AEPDRIVVIDAVGTVDEVFSEIRGVLVERFE 205


>gi|320451196|ref|YP_004203292.1| thymidylate kinase [Thermus scotoductus SA-01]
 gi|320151365|gb|ADW22743.1| thymidylate kinase [Thermus scotoductus SA-01]
          Length = 199

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 13/210 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F++ EG++G+GKTT   LL +FL+ K   V +TREPGG       R +LL    +  
Sbjct: 2   KGFFLTLEGLDGSGKTTQARLLAQFLEEKGIKVRLTREPGGGLPG--VRDLLLKG--EAL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++F+A R +HV  VI PAL EG  ++ DR+LDSS AYQG        +L  + +
Sbjct: 58  SPEAEYLLFSADRAEHVRKVILPALEEGFWVISDRYLDSSLAYQGYGQGLPLPWLKEVAK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T +LDLP +  LKRV            D  ER  +   ++ RQ +L +A 
Sbjct: 118 EATLGLKPDLTFLLDLPPEEALKRVSA---------PDRLERMGLPFFQRVRQGYLKLAA 168

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+R  ++D+    + V   I   +  L+
Sbjct: 169 AEPERFRVLDATRPVEEVQAAIRFGILPLL 198


>gi|322386922|ref|ZP_08060546.1| thymidylate kinase [Streptococcus cristatus ATCC 51100]
 gi|321269204|gb|EFX52140.1| thymidylate kinase [Streptococcus cristatus ATCC 51100]
          Length = 212

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 5/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FIS EG EGAGKT+ +  L   L+   Y++  TREPGG   +E  R V+L  G  
Sbjct: 1   MKKGVFISLEGPEGAGKTSVLEALLPQLKEMGYELLTTREPGGVAISEKIREVILDKGHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+AE +++ A+R  H+   + PAL +G  +L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKAELLLYIASRRQHLAEKVLPALEQGTWVLQDRFIDSSVAYQGYGRGLAVDDVEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V  GL R+  R   RE   ++  + + + +HE+ RQ +L I
Sbjct: 121 NQFATDGLKPDLTLYFDIDVKEGLARI-ARNKERE---VNRLDLEGLDLHERVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE-LVQKR 215
              +P R   +D++   + V  + L ++ E  ++++
Sbjct: 177 LEKEPGRVVKIDASQPLEQVVADSLAVIKERFIKEK 212


>gi|320325316|gb|EFW81383.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 210

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAVAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|169825658|ref|YP_001695816.1| thymidylate kinase [Lysinibacillus sphaericus C3-41]
 gi|168990146|gb|ACA37686.1| Thymidylate kinase [Lysinibacillus sphaericus C3-41]
          Length = 215

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MNS LFI+FEG EGAGKTT I  +   L  KN DV  TREPGG   AE  R ++L+    
Sbjct: 7   MNSNLFITFEGPEGAGKTTVIQKIAERLAEKNIDVLATREPGGIEIAEKIRTIILNPAHT 66

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H    +RPAL  GK+++CDRF+DSS AYQG         + S+
Sbjct: 67  AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQGYARGIGIDEVLSI 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++ + +PD TI+ D+  ++GL R+        +  ++  + + +  H+K  + +L +
Sbjct: 127 NEFAIGKKLPDMTILFDIAPEVGLARI----YATGNREVNRLDVESLPFHQKVHEGYLLL 182

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               P+R  +V++     SV   + +++ + +Q
Sbjct: 183 VERYPERIRMVNADQDIDSVVEEVWSLLLKAIQ 215


>gi|295692244|ref|YP_003600854.1| thymidylate kinase [Lactobacillus crispatus ST1]
 gi|295030350|emb|CBL49829.1| Thymidylate kinase [Lactobacillus crispatus ST1]
          Length = 212

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 11/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58
            G F+SFEG +GAGK+T    LK  L +   +      VTREPGG+  AE  R ++L   
Sbjct: 2   RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELKTQYLVTREPGGSKIAEKIRDIILDPA 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG         + 
Sbjct: 59  NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    FL
Sbjct: 119 QINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +    P+R   VD+      V   ++  + + + +
Sbjct: 175 KVKETYPERFVTVDATQPIDQVVAQVIATLKQRMPE 210


>gi|317153459|ref|YP_004121507.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943710|gb|ADU62761.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2]
          Length = 213

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 110/209 (52%), Gaps = 1/209 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GKTT I+ LK + + +   VH+TREPGG+      R +LL     +   
Sbjct: 1   MFITFEGIEGTGKTTQIARLKEYFESRGRAVHLTREPGGSRVGRELRQMLLHVDNADLTP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  ++ A R  HV  VIRP L  G+++LCDRF DS+  YQG         L  L E++
Sbjct: 61  ITELFLYLADRAQHVAQVIRPQLEAGRVVLCDRFADSTIVYQGFGRGLDTAILKQLNEVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V  V PD TI+LD+  ++GLKR   R      A  +  FE + +  H + R+ +L  A  
Sbjct: 121 VDGVWPDLTIVLDIDPEVGLKRATLRNLDDGKAKEEGRFEAEHISFHRRIREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             DR  + D++ +   V   +  ++   +
Sbjct: 181 NRDRIRVADASATPDEVFARVKALIETHL 209


>gi|238853621|ref|ZP_04643990.1| dTMP kinase [Lactobacillus gasseri 202-4]
 gi|238833765|gb|EEQ26033.1| dTMP kinase [Lactobacillus gasseri 202-4]
          Length = 213

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ L + L ++      +TREPGG+  +E  R ++L     E
Sbjct: 2   KGYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG         +  + 
Sbjct: 62  MDDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQGVGRDLGVEEVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD TI LDL    GL R++       +   D  E++ +  H+K    ++D+ 
Sbjct: 122 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHKKVYAGYIDLL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  PDR   VD+    + VA N + I+ + +
Sbjct: 178 KRYPDRIKKVDANLPIEEVAANSVKIIRKQL 208


>gi|325694989|gb|EGD36893.1| thymidylate kinase [Streptococcus sanguinis SK150]
          Length = 212

 Score =  259 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ IS EG EGAGK++ +  L  FLQ     +  TREPGG   AEA R V+L     
Sbjct: 1   MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E +++ A+R  H+   + PAL +GK++L DRF+DSS AYQG         ++ L
Sbjct: 61  AMDAKTELLLYIASRRQHLAERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+       ES  ++  + + + +H++ RQ +L I
Sbjct: 121 NRFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +P+R   VD++     V  + L I+ E
Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206


>gi|326693439|ref|ZP_08230444.1| thymidylate kinase [Leuconostoc argentinum KCTC 3773]
          Length = 217

 Score =  259 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 5/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ +  L   LQ +    +  TREPGG P +EA R +L     
Sbjct: 1   MTKPLFITFEGPEGAGKTSVLQALVAELQPQLGEALVTTREPGGNPISEAIRAILQPAED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+ +V+ PAL  GK+++ DR++DSS AYQG         +  
Sbjct: 61  NGMDDRTEALLYTAARRQHLVSVVLPALEAGKVVISDRYVDSSLAYQGGGRGLGIEQIWQ 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++  +MPD TI  D+P ++GL RV      +    +D  +++ +  H+  R+ +L 
Sbjct: 121 INQFAIDGLMPDLTIYFDVPAEVGLARVMANRQDK----IDRLDKESLAFHQAVRETYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + R+  DR  ++D+    + V      ++++++  R
Sbjct: 177 LQRDFSDRIKLIDATQPLEQVIAETRTLLFDIIASR 212


>gi|256844526|ref|ZP_05550012.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN]
 gi|256613604|gb|EEU18807.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN]
          Length = 212

 Score =  259 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 11/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58
            G F+SFEG +GAGK+T    LK  L +   +      VTREPGG+  AE  R ++L   
Sbjct: 2   RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPA 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG         + 
Sbjct: 59  NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    FL
Sbjct: 119 QINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +    P+R   VD+      V   ++  + + + +
Sbjct: 175 KVKETYPERFVTVDATQPIDQVVAQVIATLKQRMPE 210


>gi|300362307|ref|ZP_07058483.1| thymidylate kinase [Lactobacillus gasseri JV-V03]
 gi|300353298|gb|EFJ69170.1| thymidylate kinase [Lactobacillus gasseri JV-V03]
          Length = 213

 Score =  259 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ L + L ++      +TREPGG+  +E  R ++L     E
Sbjct: 2   KGYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG         +  + 
Sbjct: 62  MDDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQGVGRDLGVEAVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD TI LDL    GL R++       +   D  E++ +  H+K    ++D+ 
Sbjct: 122 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHKKVYAGYIDLL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  PDR   VD+    + VA N + I+ + +
Sbjct: 178 KRYPDRIKKVDANLPIEEVAANSVKIIRKQL 208


>gi|86607432|ref|YP_476195.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab]
 gi|123504727|sp|Q2JR37|KTHY_SYNJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|86555974|gb|ABD00932.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab]
          Length = 204

 Score =  259 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 108/208 (51%), Gaps = 11/208 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EG GKTT  +LL   LQR+ Y    TREPGGT   EA R +LL    D    
Sbjct: 1   MFITLEGGEGVGKTTQQALLAERLQREGYACVSTREPGGTALGEALRELLLHG--DPLTP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++AA R +HV  VI PAL  G++++CDRF DS+ AYQG         +  L  ++
Sbjct: 59  LAELLLYAADRAEHVNKVIAPALAVGQVVICDRFTDSTLAYQGYGRGLNLEQIRQLNHLA 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P  T+ LDL  ++GL R         S   D  E++ +  H +  + F  +A  +
Sbjct: 119 TGGLQPQLTLWLDLAPEVGLAR---------SRLGDKLEQEHLEFHRRVYRGFQALAAAE 169

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P R   +D+  S   VA  I ++V   +
Sbjct: 170 PQRIVRIDAGGSPLEVAARIWSVVKPRL 197


>gi|330975208|gb|EGH75274.1| thymidylate kinase [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 210

 Score =  259 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+ +LCDRF D++YAYQG      H  + +L++
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEGVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R  +VD+  +   V  ++  ++ +L++
Sbjct: 176 AEPTRYRLVDAGQTLADVQASLDTLLPQLLE 206


>gi|118444724|ref|YP_879227.1| thymidylate kinase [Clostridium novyi NT]
 gi|171472994|sp|A0Q3M5|KTHY_CLONN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118135180|gb|ABK62224.1| thymidylate kinase [Clostridium novyi NT]
          Length = 205

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 4/209 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G FI+ EG EG+GKTT + +++++L   N +   TREPGG   +E  R V+L+    
Sbjct: 1   MNKGAFITLEGPEGSGKTTIVKMIEKYLSENNIEYISTREPGGINISEQIRDVILNKDNV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA+++ A+R  H+   + PA+ EGK+++CDRF+DSS AYQG         + ++
Sbjct: 61  AMDARTEALLYVASRRQHLAERVIPAIKEGKVVICDRFIDSSLAYQGYARGIGIDEVMAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++   MPD T+ LD+  ++GLKR+           ++  + + +  H+K R+ +  +
Sbjct: 121 NEFAIDGYMPDLTLYLDIEPEVGLKRISKNNE----REVNRLDLEALDFHKKVREGYFKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
               P+R   +++      V   +   + 
Sbjct: 177 LEKYPNRIKKINANQPVDKVFEEVKGFLK 205


>gi|154253550|ref|YP_001414374.1| dTMP kinase [Parvibaculum lavamentivorans DS-1]
 gi|154157500|gb|ABS64717.1| dTMP kinase [Parvibaculum lavamentivorans DS-1]
          Length = 209

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EG EGAGK+T +  L   L+     V +TREPGG P AEA RH+L++  V 
Sbjct: 1   MPRARFITLEGGEGAGKSTQVRRLAARLEAAGQRVTITREPGGAPGAEAIRHLLVTGDVA 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +  +AE ++  AAR DH+   IRPAL  G  ++CDRF+DS+ AYQG         ++ L
Sbjct: 61  RWTPKAEMLLHFAAREDHLSRTIRPALERGDWVICDRFVDSTMAYQGFAQGLGPELVNEL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +EI + + MP  T+ILDLPV+ GL R  +R    E    D +ER D+  HE  RQ F  I
Sbjct: 121 KEIVIGDDMPGLTLILDLPVETGLARAGSRGQGAE----DRYERMDLRFHETLRQAFETI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A+N+P+RC +VD++ +   VA  I   V   +
Sbjct: 177 AKNEPERCVMVDASQTEDEVAEAIWAEVKPRL 208


>gi|30250115|ref|NP_842185.1| thymidylate kinase [Nitrosomonas europaea ATCC 19718]
 gi|46576512|sp|Q82SW5|KTHY_NITEU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|30139222|emb|CAD86092.1| Thymidylate kinase [Nitrosomonas europaea ATCC 19718]
          Length = 215

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 7/211 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EGI+GAGK+TH++ L+RFLQ K  +V VTREPGGT   EA R +LL     
Sbjct: 1   MQRGKFITVEGIDGAGKSTHLAWLERFLQDKGLEVVVTREPGGTALGEALRQLLLDHR-Q 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E EA++  AAR +H++ VI PAL  G  ++ DRF D+S+AYQG         LD+L
Sbjct: 60  AMHPETEALLMFAARREHLDKVILPALDRGAWVVSDRFTDASFAYQGGGRGVAQSKLDNL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++    E+ PD T+  D+PV +G +R+Q+      +   D FE +  +  E+ RQ +L  
Sbjct: 120 EQWVQAELSPDLTVYFDVPVIVGRERLQS------TRVADRFEMESNLFFERVRQAYLQR 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  +VD +     V T +  IV + 
Sbjct: 174 AEQFPQRIRVVDGSRLLAEVKTAVAEIVEDF 204


>gi|237748461|ref|ZP_04578941.1| thymidylate kinase [Oxalobacter formigenes OXCC13]
 gi|229379823|gb|EEO29914.1| thymidylate kinase [Oxalobacter formigenes OXCC13]
          Length = 207

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 9/210 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG FI+FEGI+GAGK+THI  +   L+  N  V VTREPGGT   E  R +LL    D+
Sbjct: 6   HSGRFITFEGIDGAGKSTHIQFVTDLLRADNRQVVVTREPGGTVLGEKLREMLLH---DK 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  AAR +H+  VI PAL  G  ++ DRF D+S+AYQG         +  L+
Sbjct: 63  MNLETEALLMFAARREHIAEVIEPALQRGDWVISDRFTDASFAYQGGGRGLDLHKMRQLE 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E     + PD T++ D+  ++   R++       +   D FER+      + R  +L  A
Sbjct: 123 EWVHPHLQPDLTLLFDVSPEVAQARLEA------ARSPDKFEREKSGFFNRVRDEYLRRA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  PDR  ++DS+ S +++   I  ++ EL
Sbjct: 177 KEFPDRFRVIDSSRSIEAIRETIKGLIGEL 206


>gi|291614001|ref|YP_003524158.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1]
 gi|291584113|gb|ADE11771.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1]
          Length = 202

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++  FI+FEG++GAGK+TH+      L+++  D+ VTREPGGT   E  R +LL+    
Sbjct: 1   MSTAKFITFEGVDGAGKSTHLDWFANVLRQRGIDLLVTREPGGTQLGERLREILLNQ--- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AE EA++  AAR +HVE VIRPAL  G  ++ DRF D+S+AYQG         L+ L
Sbjct: 58  PMHAETEALLMFAARREHVEQVIRPALQRGTWVISDRFSDASFAYQGGGRGVPVAKLEQL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++    ++ PD T++ D+P++I  +R+ N      +A LD FE++     E+ RQ +L  
Sbjct: 118 EQWVHGDIQPDLTLLFDIPIEIARQRLSN------NASLDRFEQEQGEFFERVRQAYLSR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  ++ +  S   V  ++  IV  L
Sbjct: 172 AAKTPHRFAVIHAEKSMDEVKQDLAKIVASL 202


>gi|331000633|ref|ZP_08324288.1| dTMP kinase [Parasutterella excrementihominis YIT 11859]
 gi|329570905|gb|EGG52613.1| dTMP kinase [Parasutterella excrementihominis YIT 11859]
          Length = 202

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 11/211 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG++GAGK+T   ++   L+ +  D  +TREPGG  +AE  R +LL+   + 
Sbjct: 3   KRGKFITVEGVDGAGKSTQFEVIANALKERGIDFVMTREPGGPQSAEKIRELLLN---EP 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ E +V  AAR +++  +IRPAL  GK +LCDRF D+S AYQG         ++ L 
Sbjct: 60  MTAKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLA 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                ++ PD T+I DLP ++   R+        S  LD FE++D   H + RQ +L+IA
Sbjct: 120 NFVHPDIKPDKTVIFDLPTEVAAARL--------SRKLDRFEQEDADFHRRVRQGYLEIA 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + +P+RC ++D+  + + V+  +L  V   V
Sbjct: 172 KREPERCVVIDAQGTPEEVSARVLKEVETWV 202


>gi|160893397|ref|ZP_02074183.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50]
 gi|156864972|gb|EDO58403.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50]
          Length = 211

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+ EG +GAGKTT I LLK +L +K YDV +TR+PGG   +EA R V+L+    E 
Sbjct: 5   QGIFITMEGPDGAGKTTQIELLKDYLNKKGYDVLITRDPGGNAVSEAIREVILNKDFTEM 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E +++AAAR   V+  I+PAL  GK ++ DRF+DSS  YQG         +  + E
Sbjct: 65  GYMTELLLYAAARAQLVKENIKPALSAGKAVIADRFVDSSAVYQGIGRGLGIDTVYKVNE 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++Q ++PD T ++DL  + G+ R +N       A LD  E++ +  H+K  + +  +A 
Sbjct: 125 FALQGILPDMTFLMDLDAEAGIARKKN------QAELDRMEQESLEFHKKVVEGYRCLAE 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             PDR   VD+A   +++   I++ V + + +
Sbjct: 179 MNPDRIVKVDAALPKEAIHDIIISYVEKWLAR 210


>gi|319405648|emb|CBI79271.1| Thymidylate kinase [Bartonella sp. AR 15-3]
          Length = 210

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 135/210 (64%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT ISLL + L RK YDV +TREPGGT  AEA R++LLS  V E+
Sbjct: 2   SGYFITFEGGEGAGKTTQISLLAQHLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAEY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E  +F AAR DHV  +I+P+L  GKI+LCDRF+DS+  YQG  +         L+ 
Sbjct: 62  GPFIETFLFTAARADHVSEIIKPSLQAGKIVLCDRFIDSTRVYQGLDNKVDAHIFSILEH 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I ++ + PD T +LD+P  +G++RV  R        +DYFE+  + + E+RRQ FL++A+
Sbjct: 122 IGMKGIKPDLTFLLDIPAKLGMERVNLRRK-----KIDYFEKASLALQEQRRQAFLELAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++P R  ++D   S + +A  I +I  + +
Sbjct: 177 HEPHRFQVIDGTCSVEVIADQIKDICHQAL 206


>gi|157690810|ref|YP_001485272.1| thymidylate kinase [Bacillus pumilus SAFR-032]
 gi|166987700|sp|A8F8Z5|KTHY_BACP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157679568|gb|ABV60712.1| dTMP kinase [Bacillus pumilus SAFR-032]
          Length = 212

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+FEG EGAGKTT I  +   ++R+ Y V  TREPGG   AE  R V+L+    + 
Sbjct: 2   SGMFITFEGPEGAGKTTVIRKVHEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  H+   + PAL  G+ +LCDRF+DSS AYQG         + S+ +
Sbjct: 62  DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQGYARGLGIDQVRSIND 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++   MP  TI   +  + GLKR+       +    +  + + +  H+  R+ +  +  
Sbjct: 122 FAIDGTMPQMTIYFSITPEEGLKRIHANQGREK----NRLDMETLNFHQLVREGYELLIA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H+VD++   Q V   +L ++ + ++K
Sbjct: 178 QSPERFHVVDASKPMQDVYEEVLRVIQDTLKK 209


>gi|297205016|ref|ZP_06922412.1| thymidylate kinase [Lactobacillus jensenii JV-V16]
 gi|297149594|gb|EFH29891.1| thymidylate kinase [Lactobacillus jensenii JV-V16]
          Length = 215

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKTT +  L   +++K   ++ VTREPGG+  AEA R ++L+    E
Sbjct: 2   AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G+++  DRF+DSS AYQG   +     +  + 
Sbjct: 62  MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQGMGRNLGIEKVAEIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + P+ T+ LD+    GL R+      +E    D  E++ +  H+K    + +I 
Sbjct: 122 QFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQEIV 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  P+R  +VD++     V  + L I+ + +
Sbjct: 178 KRYPERIKVVDASQDIDQVVADCLAILKQQL 208


>gi|329939427|ref|ZP_08288763.1| integral membrane protein with kinase activity [Streptomyces
           griseoaurantiacus M045]
 gi|329301656|gb|EGG45550.1| integral membrane protein with kinase activity [Streptomyces
           griseoaurantiacus M045]
          Length = 1078

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G F++ EG +GAGK+T    L  +++ K ++V +T EPG TP  +  R +LL      
Sbjct: 503 TNGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTHEPGATPVGKRLRSILLDVSSAG 562

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  + 
Sbjct: 563 LSHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARIS 622

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P  T++LD+      +R         +   D  E +    H + R  FL +A
Sbjct: 623 RWATNGLVPHLTVLLDVDPQAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 674

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  +VD     ++V T + + +  ++
Sbjct: 675 AADPGRYLVVDGGQEPEAVTTAVRHRLDRML 705


>gi|303248931|ref|ZP_07335178.1| thymidylate kinase [Desulfovibrio fructosovorans JJ]
 gi|302489654|gb|EFL49590.1| thymidylate kinase [Desulfovibrio fructosovorans JJ]
          Length = 211

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 1/211 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG+GK+T I+LLK  L+     V  TR+PGG P  E  R +LLS        
Sbjct: 1   MFITFEGIEGSGKSTQITLLKSALEATGKSVVTTRQPGGCPLGETLRSILLSTQTKNLDH 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A R  H+  VIRPA   G I+LCDRF DS+  YQG         L  L +I+
Sbjct: 61  RAELFLYLADRAQHIAEVIRPAQNAGHIVLCDRFADSTVVYQGYGRGLDVAMLHELNDIA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V    P  TI+LDL  + GL+R   R     +   +  FE +D+  H + R  +L +A  
Sbjct: 121 VAGAWPQRTILLDLDPEQGLRRALARNLKTGNCATEGRFEAEDIDFHTRIRDGYLALASL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P R  ++D+     +VA  +   V   + +
Sbjct: 181 HPRRYAVIDATPDVATVAKAVWAAVSSRMSE 211


>gi|260434141|ref|ZP_05788112.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417969|gb|EEX11228.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 210

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F++FEGI+G+GK+T   +L   L+   ++V +TREPGG+P AE  R ++L    D +
Sbjct: 4   RGMFLTFEGIDGSGKSTQARMLAEHLRLSGHEVVLTREPGGSPGAEEIRRLVLEGDPDRW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL EGKI++CDRF DS+  YQG         +D L +
Sbjct: 64  SAETEILLFTAARRDHLERTIEPALAEGKIVICDRFADSTRMYQGLSRGDLRAIVDQLHQ 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + ++   PD T+++D+  + GL R + R+   E      FE     +  + R+ FL++A 
Sbjct: 124 LMIRR-EPDLTLLIDMDPETGLARAKGRHGGEE-----RFEDFGPDLQRRMRKGFLELAE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D      SV+ ++  I  + +Q+
Sbjct: 178 EFPERFRVIDGNRDMDSVSRDVTQIALQALQQ 209


>gi|192362258|ref|YP_001982459.1| thymidylate kinase [Cellvibrio japonicus Ueda107]
 gi|190688423|gb|ACE86101.1| thymidylate kinase [Cellvibrio japonicus Ueda107]
          Length = 213

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG F++ EG EG GK+T+++ ++ +L+ +  ++ VTREPGGTP AE  R++LL+   +
Sbjct: 6   MQSGKFLTMEGTEGVGKSTNLAFVRAWLEARGIELIVTREPGGTPLAEEIRNLLLAKRTE 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++  AAR  H+  VI+PAL  G  +L DRF D++YAYQG         ++ L
Sbjct: 66  PVDETAELLLVFAARAQHLAQVIKPALARGAWVLSDRFTDATYAYQGGGRGLSLAIIEQL 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  Q++ PD T++LD+ V  GL+R   R      A LD FE + +   E+ R  +   
Sbjct: 126 ENLVQQQLRPDLTLVLDIDVQKGLERASQR------AELDRFESESLAFFERVRAAYHSR 179

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A   P+R  ++D+  S + V  +I   + +L+Q
Sbjct: 180 AAMAPERYTLIDAGQSLERVQQDIAARLEQLIQ 212


>gi|77411409|ref|ZP_00787756.1| thymidylate kinase [Streptococcus agalactiae CJB111]
 gi|77162582|gb|EAO73546.1| thymidylate kinase [Streptococcus agalactiae CJB111]
          Length = 211

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 118/215 (54%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVVPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +     PD T+  D+P ++GL+R+Q          ++  + + + +H++ RQ +L+
Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSV----QREINRLDLEQLDMHQRVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +A  +P+R   +D++     V     +I+ + + +
Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211


>gi|27262450|gb|AAN87506.1| Thymidylate kinase [Heliobacillus mobilis]
          Length = 241

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 7/211 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +GAGKTT  +LL +  +   Y V  TREPGGTP  EAAR VLL   +    
Sbjct: 31  GLFITLEGADGAGKTTQGALLAQAFRALQYPVLETREPGGTPVGEAARRVLLDPSLTGMA 90

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE  ++AAAR   +  VI PAL  G +++CDRF DS+ AYQG         L S+   
Sbjct: 91  PMAEVFLYAAARAQLIREVILPALAAGTVVICDRFTDSTLAYQGYGRGLDMDRLQSINHW 150

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + PD T++LD+  D GL R + +         D  E +    H+K R  FL++A  
Sbjct: 151 ATEGLAPDLTLLLDIDSDEGLSRARRK-------GADRMEMETAAFHQKVRHGFLELAAK 203

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  R  ++ +      V   ++N V E V +
Sbjct: 204 ETSRIRVIPAGRDIFEVHRQVINAVREKVPE 234


>gi|227894602|ref|ZP_04012407.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047]
 gi|227863593|gb|EEJ71014.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047]
          Length = 216

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 121/213 (56%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +L +   R      VTREPGG+  AE  R ++L    D+
Sbjct: 6   RGYFVSFEGPDGAGKSTVLKEVLAKISPRLKPQYLVTREPGGSKIAEKIRDIILDPANDK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AA+R  HVE VI+PAL  GKI+  DRF+DSS AYQGE        +  + 
Sbjct: 66  MDAKTEALLYAASRSQHVEEVIKPALAAGKIVFSDRFVDSSLAYQGEGRGLGIKEVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGLKR++     +E    D  E++++  H+K    FL + 
Sbjct: 126 DFATDKLDPDLTFFLDVAPEIGLKRIEKLRPDQE----DRLEQENIAFHKKVYAGFLKVR 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              PDR   +D+    + V   +++++ + + +
Sbjct: 182 DMYPDRFVTIDATQPIEKVVDQVISVLEQRMPE 214


>gi|296453337|ref|YP_003660480.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301]
 gi|296182768|gb|ADG99649.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301]
          Length = 233

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 11/218 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL     G 
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ          + S
Sbjct: 62  VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++PD T +LD+   +   R+++          D  E        + RQ FLD
Sbjct: 122 LSMWATNNLLPDRTYLLDMDPVLSHNRLEH--------AEDRMESAGSGFQSRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +A  +P+R H++D++ S + V + I   +  L++  V+
Sbjct: 174 LAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211


>gi|328883355|emb|CCA56594.1| Permeases of the major facilitator superfamily or Thymidylate
           kinase [Streptomyces venezuelae ATCC 10712]
          Length = 1162

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 535 TGFFIALEGGDGAGKSTQVQALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 594

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++++RPAL  G I+L DR++DSS AYQG         +  +  
Sbjct: 595 SNRAEALLYAADRAEHVDSLVRPALERGAIVLSDRYIDSSVAYQGAGRDLSPTEIARISR 654

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 655 WATDGLVPHLTVVLDVSPETARERF--------TEAPDRLESEPPEFHARVRAGFLALAA 706

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V T + + +  ++
Sbjct: 707 ADPSRYLVVDAGQEPEAVTTVVRHRLDRML 736


>gi|22537716|ref|NP_688567.1| thymidylate kinase [Streptococcus agalactiae 2603V/R]
 gi|25011666|ref|NP_736061.1| thymidylate kinase [Streptococcus agalactiae NEM316]
 gi|76787087|ref|YP_330195.1| thymidylate kinase [Streptococcus agalactiae A909]
 gi|76799459|ref|ZP_00781603.1| thymidylate kinase [Streptococcus agalactiae 18RS21]
 gi|77408332|ref|ZP_00785074.1| thymidylate kinase [Streptococcus agalactiae COH1]
 gi|46576569|sp|Q8DYB3|KTHY_STRA5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576575|sp|Q8E3X8|KTHY_STRA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123601435|sp|Q3JZV8|KTHY_STRA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|22534605|gb|AAN00440.1|AE014263_19 thymidylate kinase [Streptococcus agalactiae 2603V/R]
 gi|24413206|emb|CAD47285.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562144|gb|ABA44728.1| thymidylate kinase [Streptococcus agalactiae A909]
 gi|76585186|gb|EAO61800.1| thymidylate kinase [Streptococcus agalactiae 18RS21]
 gi|77173095|gb|EAO76222.1| thymidylate kinase [Streptococcus agalactiae COH1]
 gi|319745548|gb|EFV97850.1| thymidylate kinase [Streptococcus agalactiae ATCC 13813]
          Length = 211

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +     PD T+  D+P ++GL+R+Q          ++  + + + +H++ RQ +L+
Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQK----SVQREVNRLDLEQLDMHQRVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +A ++P+R   +D++     V     +I+ + + +
Sbjct: 177 LADSEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211


>gi|220932870|ref|YP_002509778.1| dTMP kinase [Halothermothrix orenii H 168]
 gi|254808299|sp|B8CZT1|KTHY_HALOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219994180|gb|ACL70783.1| dTMP kinase [Halothermothrix orenii H 168]
          Length = 207

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 119/210 (56%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+ EGIEG+GK+T I +L + L++  +DV +TREPGGTP  +  R +LL       
Sbjct: 2   RGLFITLEGIEGSGKSTQIEMLYKRLKKDGFDVIITREPGGTPIGKEIRKLLLDPDNI-M 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA+AE +++AA R  HV  +I+PAL  GK++L DRF+DSS AYQG         + ++ E
Sbjct: 61  GAKAEFLLYAADRAQHVVELIKPALESGKVVLADRFIDSSIAYQGYGRGLDIDVVKTVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD T +LDL V+ GL+R +           D  ER+ V  H + RQ +  +A 
Sbjct: 121 WVIDGCWPDLTFVLDLDVEKGLERAR---GYSPDNQGDRLERELVTFHRRVRQAYHQLAE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++  R  ++D+  S + +   I + V   +
Sbjct: 178 DR--RFIMLDADRSREEIHREIYHKVKGCL 205


>gi|254489864|ref|ZP_05103059.1| thymidylate kinase [Methylophaga thiooxidans DMS010]
 gi|224464949|gb|EEF81203.1| thymidylate kinase [Methylophaga thiooxydans DMS010]
          Length = 206

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G FIS EGIEGAGK+T +  ++ FL+ +   V VTREPGGT   E  R +LL+   +
Sbjct: 1   MN-GKFISIEGIEGAGKSTQMRFIQSFLEHQGKTVVVTREPGGTVLGEQIRELLLTPRDE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +AE ++  AAR +H+E VI+PAL  G  +L DRF+D+++AYQG         ++S+
Sbjct: 60  GMSHDAELLLMFAARAEHLEQVIKPALSRGDWVLSDRFVDATFAYQGGGRGIDIKRIESI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++Q +  D T++ DLPV +G +RV  R   +     D FE++  +  EK RQ +L  
Sbjct: 120 SDWTLQAIHTDLTLLFDLPVAVGQERVIKRSQDK-----DRFEQEKGVFFEKIRQCYLQR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A ++PDR   +D+  + +++   +   +  L+
Sbjct: 175 ADHEPDRIKKIDAGQTIENIQHQVTTALMALL 206


>gi|126652958|ref|ZP_01725100.1| thymidylate kinase [Bacillus sp. B14905]
 gi|126590288|gb|EAZ84410.1| thymidylate kinase [Bacillus sp. B14905]
          Length = 215

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 118/213 (55%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S LFI+FEG EGAGKTT I  +   L   N DV  TREPGG   AE  R ++L+    
Sbjct: 7   MKSNLFITFEGPEGAGKTTVIQKIAERLAEINIDVLATREPGGIEIAEKIRTIILNPAHT 66

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H    ++PAL  GK+++CDRF+DSS AYQG         + S+
Sbjct: 67  AMDERTEALLYAAARSQHYFEKVQPALDAGKLVICDRFIDSSLAYQGYARGIGIDEVLSI 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++ + +PD TI+ D+  ++GL R+        +  ++  + + +  H+K  + +L +
Sbjct: 127 NEFAIGKKLPDMTILFDIAPEVGLARI----YATGNREVNRLDVESLPFHQKVHEGYLLL 182

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               P+R  IV++     SV  ++ +++ + +Q
Sbjct: 183 VERYPERIRIVNADQDIDSVVEDVWSLLLDAIQ 215


>gi|167755132|ref|ZP_02427259.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402]
 gi|237733442|ref|ZP_04563923.1| thymidylate kinase [Mollicutes bacterium D7]
 gi|167705182|gb|EDS19761.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402]
 gi|229383477|gb|EEO33568.1| thymidylate kinase [Coprobacillus sp. D7]
          Length = 206

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG +G+GKTT   ++   LQ + Y V +TREPGG   AE  R ++L       
Sbjct: 2   KGKFITLEGPDGSGKTTVSKIVVEQLQMEGYKVLLTREPGGIDIAEQIRKIILDTNNITM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +G I++CDRF+DSS  YQG         +  + +
Sbjct: 62  DARTEALLYAAARRQHLVEKVAPALNDGYIVICDRFVDSSLVYQGVGRKIGIEEVYQINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  + PD TI  DLP ++GL R+ N          D  + +    H+     ++ I  
Sbjct: 122 FAIGNIKPDATIFFDLPYEVGLARINN-----GERVADRLDLESDDFHKDVYNGYMTICE 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +R   +D++ +   V   ++N++   +
Sbjct: 177 KYAERITKIDASKTIDEVVAQVINVIKSKL 206


>gi|319946509|ref|ZP_08020745.1| thymidylate kinase [Streptococcus australis ATCC 700641]
 gi|319747340|gb|EFV99597.1| thymidylate kinase [Streptococcus australis ATCC 700641]
          Length = 212

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  IS EG EGAGK++ +  L   L++       TREPGG   AE  R V+L     
Sbjct: 1   MKQGTLISIEGPEGAGKSSVLEALLPRLEKAGIAYITTREPGGVTIAEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         ++ L
Sbjct: 61  EMDPKTELLLYIASRRQHLAERVLPALEAGKLVIMDRFIDSSVAYQGFGRGLAVTDIEWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + P+ T   D+ V+ GL R+        S  ++  + + + +H+K RQ +L I
Sbjct: 121 NQFATDGLKPNRTFYFDIDVEEGLARIAK----SASREVNRLDLEGLSLHQKVRQGYLVI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +P R   +D++  F  V  +   +V E+++
Sbjct: 177 LEKEPQRVVKIDASQPFDKVVEDTWILVKEVLE 209


>gi|321313698|ref|YP_004205985.1| thymidylate kinase [Bacillus subtilis BSn5]
 gi|320019972|gb|ADV94958.1| thymidylate kinase [Bacillus subtilis BSn5]
          Length = 212

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG         + S+ E
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ ++MP  T+   +  + GLKR+    S  +    +  + + +  H K ++ + ++ +
Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 178 RFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209


>gi|297159269|gb|ADI08981.1| putative thymidylate kinase [Streptomyces bingchenggensis BCW-1]
          Length = 1080

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI  EG +GAGKTT +  L  +++ K ++V VTREPG T   +  R +LL       
Sbjct: 499 TGFFIVVEGGDGAGKTTQVEALAEWIRGKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 558

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 559 SHRAEALLYAADRAEHVDSVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 618

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 619 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHQRVRNGFLTLAA 670

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V   + + +  ++
Sbjct: 671 ADPARYLVVDAGQLPEAVTAVVRHRLDLVL 700


>gi|294813363|ref|ZP_06772006.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
 gi|326441702|ref|ZP_08216436.1| thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
 gi|294325962|gb|EFG07605.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064]
          Length = 1131

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 535 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 594

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV +V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 595 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 654

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 655 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 706

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V T + + + +++
Sbjct: 707 GDPARYLVVDAGQEPEAVTTVVRHRLDQML 736


>gi|254283811|ref|ZP_04958779.1| thymidylate kinase [gamma proteobacterium NOR51-B]
 gi|219680014|gb|EED36363.1| thymidylate kinase [gamma proteobacterium NOR51-B]
          Length = 208

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 6/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G F++ EG EG GK+T++  + + L+ +  D+ VTREPGGTP AEA R +L+S   D
Sbjct: 1   MKPGQFLTVEGGEGVGKSTNLDFIAKTLRAQGIDLVVTREPGGTPLAEALRALLISDSED 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++  AAR  H+  VI PAL  G+ +LCDRF D+++AYQG     +   +++L
Sbjct: 61  PPCPNAELLMIFAARAQHLSTVIEPALKAGRWVLCDRFTDATFAYQGAGRGIEWSSIETL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +   +  PD T++LD+   IG+ R  +R        LD FER+ +   ++ R+ +   
Sbjct: 121 ENLIQGDRRPDLTLLLDMEPAIGMDRAGSR------GALDRFEREALPFFDRVRRGYKTR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  ++D++ S  +V  +I  ++ EL
Sbjct: 175 AAQAPHRYRVIDASQSIDAVQRDIARVLAEL 205


>gi|167465293|ref|ZP_02330382.1| dTMP kinase [Paenibacillus larvae subsp. larvae BRL-230010]
 gi|322381217|ref|ZP_08055220.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154793|gb|EFX47064.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 221

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 72/217 (33%), Positives = 123/217 (56%), Gaps = 5/217 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F++FEG +G+GKTT I LL   L ++ + V  TREPGGTP ++  R ++LS    E 
Sbjct: 2   KGVFVTFEGPDGSGKTTQIRLLADALNKQGFQVLQTREPGGTPISDQIRSLILSPEHQEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E +++AA+R  HV  VI PAL +GKI+LCDRF+D+S AYQ      +   +  +  
Sbjct: 62  KDQTEVLLYAASRAQHVHEVILPALKQGKIVLCDRFIDASLAYQAYGLGIEFESVIEVNR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T +LD+PV+I   R+  R        LD  E+K    H++ R+ F  I +
Sbjct: 122 FASSGLLPNRTYLLDVPVEISRSRLTRRE-----EGLDRIEQKGRDYHQRVREGFHQIYK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
             P+R  ++++  + + +A  I    +  ++ ++  +
Sbjct: 177 ENPERICLIEAEGNVEDIALRIQTDFFSWLKGKIGKM 213


>gi|152996289|ref|YP_001341124.1| dTMP kinase [Marinomonas sp. MWYL1]
 gi|189028836|sp|A6VXL0|KTHY_MARMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150837213|gb|ABR71189.1| dTMP kinase [Marinomonas sp. MWYL1]
          Length = 212

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 6/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FIS EG EG+GKTT I  ++++L        +TREPGGTP AE  R ++L+   +  
Sbjct: 2   RGKFISLEGGEGSGKTTAIHFIRQWLDDHKIPYIMTREPGGTPLAEEIRQLVLTPRDESV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  H+   I+PAL +G  ++ DRFLDSSY YQG+        LD L  
Sbjct: 62  NDVTELLLVFAARAQHLAEKIQPALEKGTWVISDRFLDSSYVYQGKARGGDIAMLDQLAN 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V +  PD T++LD+PV++G +RV  R         D  +++    H+K R  FL+ A 
Sbjct: 122 WVVGDNKPDATLVLDVPVELGQERVVQRQHQ------DRLDKESFAFHQKVRDGFLERAE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P R  IVD++ S +SV + I   + +L
Sbjct: 176 ADPKRVKIVDASQSLESVKSQIEEQLAKL 204


>gi|256852109|ref|ZP_05557496.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260661321|ref|ZP_05862234.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN]
 gi|282934782|ref|ZP_06340020.1| dTMP kinase [Lactobacillus jensenii 208-1]
 gi|256615521|gb|EEU20711.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260547776|gb|EEX23753.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN]
 gi|281301145|gb|EFA93451.1| dTMP kinase [Lactobacillus jensenii 208-1]
          Length = 215

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKTT +  L   +++K   ++ VTREPGG+  AEA R ++L+    E
Sbjct: 2   AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G+++  DRF+DSS AYQG   +     +  + 
Sbjct: 62  MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQGMGRNLGIEKVAEIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + P+ T+ LD+    GL R+      +E    D  E++ +  H+K    + +I 
Sbjct: 122 QFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQEIV 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  P+R  +VD++     V  + L I+ + +
Sbjct: 178 KRYPERIKVVDASQDIDQVIADCLAILKQQL 208


>gi|325982933|ref|YP_004295335.1| thymidylate kinase [Nitrosomonas sp. AL212]
 gi|325532452|gb|ADZ27173.1| thymidylate kinase [Nitrosomonas sp. AL212]
          Length = 208

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G F++ EGI+GAGK+T +  +   LQR      VTREPGGT   E  R +LL     
Sbjct: 1   MKQGKFLTLEGIDGAGKSTQLVWIAELLQRAGLSAVVTREPGGTLLGEQLRALLLD-KFI 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E EA++  AAR +H++ VI PAL +G+ ++ DRF D+S+AYQ          L  L
Sbjct: 60  SMHPETEALLMFAARREHLDKVIFPALAQGQWVISDRFTDASFAYQSGGRGLDSAKLVIL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T+  D+P D+G +RV           +D FE++      + R  +LD 
Sbjct: 120 EQWVQGALQPDLTLYFDVPADVGQQRVS------RGGVVDRFEQEQADFFLRVRAAYLDR 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A+  PDR  I+DS  S   V   +  I+  L+
Sbjct: 174 AQQFPDRIKIIDSNRSLPEVKVAVEQILQPLL 205


>gi|224369769|ref|YP_002603933.1| Tmk [Desulfobacterium autotrophicum HRM2]
 gi|259494266|sp|C0QI33|KTHY_DESAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|223692486|gb|ACN15769.1| Tmk [Desulfobacterium autotrophicum HRM2]
          Length = 227

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 1/209 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEG+GKTT I  L   L +  Y+  VTREPG T   +  R +LL  G      
Sbjct: 1   MFITLEGIEGSGKTTQIKPLVDCLGQNGYEAVVTREPGATVIGKKIRAILLDPGNSGMSD 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  ++ A R  H+  VI PAL  GK ++CDRF D++  YQG         +D +  + 
Sbjct: 61  LCELFLYGADRAQHLSEVIIPALGAGKTVVCDRFTDATTVYQGAARGISKELIDIIHSVV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           V+++ PD TI+ DL  + GL R V+       +     FER+ +  HE+ RQ +L +A  
Sbjct: 121 VKDLCPDLTILFDLDPETGLARTVKALTDGERTLDESRFERETLEFHERVRQGYLALAAA 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + DR  +VD+  + + V T I++ +   +
Sbjct: 181 EQDRFLVVDARGTQEQVFTEIVSGINRRL 209


>gi|195978711|ref|YP_002123955.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975416|gb|ACG62942.1| thymidylate kinase Tmk [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 232

 Score =  258 bits (661), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+FEG +GAGKTT +  L   LQ      +  TREPGG   AE  R ++L    
Sbjct: 22  MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 81

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I PAL  G ++L DRF+DSS AYQG         +  
Sbjct: 82  TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 141

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   V PD T+  D+P ++GL R+           ++  + + + +H++ R+ +L+
Sbjct: 142 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE----REINRLDLEQLDLHQRVRKGYLE 197

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A   P R   +D++   +SV +  L  +
Sbjct: 198 LALENPQRIVKIDASQDLESVVSAALAAI 226


>gi|318060890|ref|ZP_07979611.1| thymidylate kinase [Streptomyces sp. SA3_actG]
          Length = 1199

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL      
Sbjct: 526 TTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAG 585

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G I++ DR++DSS AYQG       + +  + 
Sbjct: 586 LSHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARIS 645

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LD+  +   +R         +   D  E +    H + R  FL +A
Sbjct: 646 RWATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 697

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R  +VD A   +SV   + + + +L+
Sbjct: 698 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 728


>gi|319939588|ref|ZP_08013947.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV]
 gi|319811177|gb|EFW07483.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV]
          Length = 212

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G+FIS EG +GAGK++ +  L   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MSKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   I PAL  G+++L DRF+DSS AYQG     +   +D L
Sbjct: 61  EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+       +    D  +R+ V  H++ R+ +L I
Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAK----SKERGADRLDRESVEWHQRVREGYLSI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            + +P+R   +D++   + V  + L ++ E V+
Sbjct: 177 LKKEPNRVRKIDASQPLEKVVADTLAVLAEHVE 209


>gi|290958517|ref|YP_003489699.1| thymidylate kinase [Streptomyces scabiei 87.22]
 gi|260648043|emb|CBG71151.1| putative thymidylate kinase [Streptomyces scabiei 87.22]
          Length = 1110

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 8/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 508 TGFFIALEGGDGAGKSTQVEALAEWVRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    HE+ R  FL +A 
Sbjct: 628 WATDGLVPHLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHERVRAGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
               R  +VD+A   ++V T +   +
Sbjct: 680 ADAGRYLVVDAAQDPEAVTTVVRARL 705


>gi|315037614|ref|YP_004031182.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112]
 gi|325956093|ref|YP_004286703.1| thymidylate kinase [Lactobacillus acidophilus 30SC]
 gi|312275747|gb|ADQ58387.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112]
 gi|325332658|gb|ADZ06566.1| thymidylate kinase [Lactobacillus acidophilus 30SC]
          Length = 212

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 118/213 (55%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G F+SFEG +GAGK+T +  +L +   +      VTREPGG+  AE  R ++L    D+
Sbjct: 2   TGYFVSFEGPDGAGKSTVLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPANDK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AAAR  HVE +I+PAL  GKI+  DRF+DSS AYQGE        +  + 
Sbjct: 62  MDAKTEALLYAAARSQHVEEIIKPALEAGKIVFSDRFVDSSLAYQGEGRDLGIKEVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  +D+  +IGL R+Q     +E    D  E++++  H+K  Q FL + 
Sbjct: 122 DFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHKKVYQGFLKVR 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P+R   +D       V   ++  + + + +
Sbjct: 178 AMYPERFVTIDGTQPIDQVVDQVITTLKQRMPE 210


>gi|238855359|ref|ZP_04645671.1| dTMP kinase [Lactobacillus jensenii 269-3]
 gi|260664925|ref|ZP_05865776.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US]
 gi|282934589|ref|ZP_06339836.1| dTMP kinase [Lactobacillus jensenii 208-1]
 gi|313472529|ref|ZP_07813019.1| dTMP kinase [Lactobacillus jensenii 1153]
 gi|238832020|gb|EEQ24345.1| dTMP kinase [Lactobacillus jensenii 269-3]
 gi|239529963|gb|EEQ68964.1| dTMP kinase [Lactobacillus jensenii 1153]
 gi|260561408|gb|EEX27381.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US]
 gi|281301341|gb|EFA93638.1| dTMP kinase [Lactobacillus jensenii 208-1]
          Length = 215

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKTT +  L   ++ +   ++ VTREPGG+  AEA R ++L     E
Sbjct: 2   AGYFITFEGPDGAGKTTVLEKLIEKIKEQVTCEILVTREPGGSKIAEAIREIILDPENTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  GK++  DRF+DSS AYQG   +     +  + 
Sbjct: 62  MDDRTEALLYAAARSQHMAEVVFPALEAGKLVFSDRFVDSSLAYQGMGRNLGIDKVAEIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+  + GL R+      +E    D  E++ +  H+K    + +I 
Sbjct: 122 QFATDGLNPDLTLFLDIKPEDGLARIAKVRPDKE----DRLEKEKLSFHKKVYTGYQEIV 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  P+R  +VD++     V  + L I+ + +
Sbjct: 178 KKYPERIKVVDASQDVDYVVADCLTILKQQL 208


>gi|262047567|ref|ZP_06020522.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US]
 gi|293379956|ref|ZP_06626057.1| thymidylate kinase [Lactobacillus crispatus 214-1]
 gi|312977918|ref|ZP_07789664.1| dTMP kinase [Lactobacillus crispatus CTV-05]
 gi|260572143|gb|EEX28708.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US]
 gi|290923469|gb|EFE00371.1| thymidylate kinase [Lactobacillus crispatus 214-1]
 gi|310895225|gb|EFQ44293.1| dTMP kinase [Lactobacillus crispatus CTV-05]
          Length = 212

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 11/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58
            G F+SFEG +GAGK+T    LK  L +   +      VTREPGG+  AE  R ++L   
Sbjct: 2   RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPA 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG         + 
Sbjct: 59  NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    FL
Sbjct: 119 QINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +    P+R   VD+      V   ++ I+ + + +
Sbjct: 175 KVKEMYPERFVTVDATQPIDQVVAQVIAILKQRMPE 210


>gi|150387935|ref|YP_001317984.1| dTMP kinase [Alkaliphilus metalliredigens QYMF]
 gi|149947797|gb|ABR46325.1| dTMP kinase [Alkaliphilus metalliredigens QYMF]
          Length = 211

 Score =  258 bits (660), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 69/214 (32%), Positives = 116/214 (54%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFISFEG++GAGK+T I   K F + + Y V +TREPGGT  +E  R  +L     
Sbjct: 1   MKNGLFISFEGVDGAGKSTQIHYAKDFFEERGYKVSLTREPGGTRISEIIREAILDRTHQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  HVE  I PAL EG+++LCDRF+DSS  YQG         + ++
Sbjct: 61  EMTHRTEALLYAASRAQHVEEFILPALAEGRVVLCDRFVDSSMVYQGRGRGLGFDAVRNI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD TI  ++   + L R+  +         D  E++ +  H    + + D+
Sbjct: 121 NQFATGGLEPDLTIFFNIHPQVSLGRINVK------EKGDRLEQEKMAFHYTVYESYHDL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A+    R  ++++    + + + +  I+  L+++
Sbjct: 175 AQMNSSRIKVIEANQEVEKIKSEVEKIMTNLLRR 208


>gi|296388546|ref|ZP_06878021.1| thymidylate kinase [Pseudomonas aeruginosa PAb1]
          Length = 210

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+ G +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG       + + +L+ 
Sbjct: 62  AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|49078908|gb|AAT49833.1| PA2962 [synthetic construct]
          Length = 211

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L+ 
Sbjct: 62  AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|29831165|ref|NP_825799.1| thymidylate kinase [Streptomyces avermitilis MA-4680]
 gi|29608279|dbj|BAC72334.1| putative thymidylate kinase [Streptomyces avermitilis MA-4680]
          Length = 1073

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEVARISR 627

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 628 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               R  IVD+    ++V T I + +  L+
Sbjct: 680 ADLGRYLIVDAGQEPEAVTTVIRHRLDTLL 709


>gi|239989562|ref|ZP_04710226.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 11379]
          Length = 1070

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 557 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+      +R         +   D  E +    HE+ R  FL +A 
Sbjct: 617 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAEFHERVRSGFLTLAA 668

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    +S+ T + + + +L+
Sbjct: 669 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 698


>gi|319783485|ref|YP_004142961.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169373|gb|ADV12911.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 231

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 99/202 (49%), Positives = 134/202 (66%), Gaps = 2/202 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EGAGK+T I  L R ++ K YDV +TREPGG+P AEA RHVLLS   +
Sbjct: 8   LARGFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 67

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG + EA++FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+D+L
Sbjct: 68  PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMDAL 127

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++++  +MPD T+I D+    GL+R   R      A  D FE++ + IH+ RR+ FL I
Sbjct: 128 EQVAINGMMPDMTLIFDIDPAEGLRRATLRRGAE--AVADRFEKETLAIHQARREAFLAI 185

Query: 181 ARNQPDRCHIVDSAHSFQSVAT 202
           A+ +P+RC +VD+A    +V  
Sbjct: 186 AKAEPERCIVVDAAAEPDAVEN 207


>gi|331012636|gb|EGH92692.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 210

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF + EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFFTLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208


>gi|75908183|ref|YP_322479.1| thymidylate kinase [Anabaena variabilis ATCC 29413]
 gi|123609755|sp|Q3MBQ2|KTHY_ANAVT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|75701908|gb|ABA21584.1| thymidylate kinase [Anabaena variabilis ATCC 29413]
          Length = 211

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 6/215 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG+EG GKT+ + L   +LQ     V +TREPGGT      R +LL    D+ 
Sbjct: 2   GGRFIVFEGVEGCGKTSQMQLCAEWLQNLGISVILTREPGGTELGVDLRRLLLQKAEDKP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            AE  E +++AA R  HV   ++P L +GK +LCDR++DS+ AYQG   +     +  L 
Sbjct: 62  IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +I+   +  D TI LD+ V++GL R +      E+  LD  E++ +  H + +Q + ++A
Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----ENVGLDRIEQETIAFHRRVQQGYANLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            + P R   VD   S ++V   I  I+   +++ +
Sbjct: 177 ASSPSRIIRVDGQLSKETVHKTIQEILSPHLKEWL 211


>gi|227877632|ref|ZP_03995685.1| thymidylate kinase [Lactobacillus crispatus JV-V01]
 gi|256849085|ref|ZP_05554518.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US]
 gi|227862780|gb|EEJ70246.1| thymidylate kinase [Lactobacillus crispatus JV-V01]
 gi|256713861|gb|EEU28849.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US]
          Length = 216

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 11/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58
            G F+SFEG +GAGK+T    LK  L +   +      VTREPGG+  AE  R ++L   
Sbjct: 6   RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPA 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+   + EA+++AA+R  HVE +IRPAL EGK++  DR++DSS AYQG         + 
Sbjct: 63  NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 122

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + + +  ++ PD T  LDL  ++GLKR++     +E    D  E++++  H+K    FL
Sbjct: 123 QINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 178

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +    P+R   VD+      V   ++ I+ + + +
Sbjct: 179 KVKEMYPERFVTVDATQPIDQVVAQVIAILKQRMPE 214


>gi|331005272|ref|ZP_08328664.1| Thymidylate kinase [gamma proteobacterium IMCC1989]
 gi|330420949|gb|EGG95223.1| Thymidylate kinase [gamma proteobacterium IMCC1989]
          Length = 211

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G F++ EG EG GK+T+I+ ++ +L  +  +V  TREPGGTP AE  R +LL    ++
Sbjct: 6   TRGKFLTIEGTEGVGKSTNIAYIQSYLTSQGIEVLTTREPGGTPLAEDIRELLLQNRDEK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR  H++ VI PAL  G+ +LCDRF D++YAYQG         ++ L+
Sbjct: 66  MDETAELLLVFAARAQHLQTVILPALERGQWVLCDRFTDATYAYQGGGRGLDLALIEMLE 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +    ++ PD T++LD+ V IGL+R   R        LD FE + V   EK R  +L  A
Sbjct: 126 QRIQGDIRPDLTLLLDIDVTIGLERAGRR------GELDRFEHEHVAFFEKVRHAYLARA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              P+R  +VD++ S + V   + + +   +Q
Sbjct: 180 ATFPERYGVVDASQSLEQVQLQVRDHLAHFLQ 211


>gi|302535280|ref|ZP_07287622.1| integral membrane protein with kinase activity [Streptomyces sp. C]
 gi|302444175|gb|EFL15991.1| integral membrane protein with kinase activity [Streptomyces sp. C]
          Length = 1094

 Score =  258 bits (659), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 114/211 (54%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL      
Sbjct: 514 TTGFFIALEGGDGAGKSTQVQALAEWIRGKGHEVVVTREPGATPVGKRLRSILLDISSAG 573

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV++++RPAL  G +++ DR++DSS AYQG         +  + 
Sbjct: 574 LSNRAEALLYAADRAEHVDSLVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 633

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LD+  +   +R         +   D  E +    H++ R  FL +A
Sbjct: 634 RWATGGLVPNLTVLLDVSPETARERF--------TEAPDRLESEPTEFHQRVRAGFLTLA 685

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  +VD+     SV T +L+ +  ++
Sbjct: 686 AADPGRYLVVDAGQDPGSVTTVVLHRLDRML 716


>gi|15598158|ref|NP_251652.1| thymidylate kinase [Pseudomonas aeruginosa PAO1]
 gi|107102512|ref|ZP_01366430.1| hypothetical protein PaerPA_01003575 [Pseudomonas aeruginosa PACS2]
 gi|218890840|ref|YP_002439704.1| thymidylate kinase [Pseudomonas aeruginosa LESB58]
 gi|254235937|ref|ZP_04929260.1| thymidylate kinase [Pseudomonas aeruginosa C3719]
 gi|313108146|ref|ZP_07794281.1| thymidylate kinase [Pseudomonas aeruginosa 39016]
 gi|14285514|sp|Q9HZN8|KTHY_PSEAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732662|sp|B7V167|KTHY_PSEA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|9949060|gb|AAG06350.1|AE004722_6 thymidylate kinase [Pseudomonas aeruginosa PAO1]
 gi|126167868|gb|EAZ53379.1| thymidylate kinase [Pseudomonas aeruginosa C3719]
 gi|218771063|emb|CAW26828.1| thymidylate kinase [Pseudomonas aeruginosa LESB58]
 gi|310880783|gb|EFQ39377.1| thymidylate kinase [Pseudomonas aeruginosa 39016]
          Length = 210

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L+ 
Sbjct: 62  AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|77406664|ref|ZP_00783707.1| thymidylate kinase [Streptococcus agalactiae H36B]
 gi|77174736|gb|EAO77562.1| thymidylate kinase [Streptococcus agalactiae H36B]
          Length = 211

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 118/215 (54%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +     PD T+  D+P ++GL+R+Q          ++  + + + +H++ RQ +L+
Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSV----QREVNRLDLEQLDMHQRVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +A  +P+R   +D++     V     +I+ + + +
Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211


>gi|302878048|ref|YP_003846612.1| thymidylate kinase [Gallionella capsiferriformans ES-2]
 gi|302580837|gb|ADL54848.1| thymidylate kinase [Gallionella capsiferriformans ES-2]
          Length = 200

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 11/207 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+FEG++GAGK+TH++     L++   DV VTREPGGTP  E  R +LL+        
Sbjct: 3   KFITFEGVDGAGKSTHLAWFAATLRQHGVDVVVTREPGGTPLGEQLREMLLNQ---PMSI 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++  AAR++HVE +I+PAL+ GK ++ DRF D+S+AYQG         L  L++  
Sbjct: 60  GTEAMLMFAARVEHVEQIIKPALLAGKWVISDRFSDASFAYQGGGRGMDWDKLRQLEQWV 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             ++ PD T+  D+PV++   R+ N  S      LD FE++     E+ R  +       
Sbjct: 120 --DLRPDLTLFFDVPVEVARARLSNNVS------LDRFEQEQGEFFERVRAGYHRRVAEN 171

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P R  ++D+A S   V   + +IV  L
Sbjct: 172 PPRYAVIDAAQSIALVQQQLQSIVANL 198


>gi|225166283|ref|ZP_03727978.1| dTMP kinase [Opitutaceae bacterium TAV2]
 gi|224799474|gb|EEG18008.1| dTMP kinase [Opitutaceae bacterium TAV2]
          Length = 234

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDE 61
           +G  IS EG EG GK+T I+ L + +Q    DV  TREPGGT   E  R++++     DE
Sbjct: 9   TGKLISLEGPEGCGKSTQIARLAKHIQLLGRDVFCTREPGGTEIGEQVRNIIVHNSKGDE 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE E ++FAA+R   V  VI P L+ G+I+L DRFLDSS  YQG   +     ++ + 
Sbjct: 69  MCAETELLLFAASRAQLVREVIAPRLLRGEIVLSDRFLDSSTVYQGVARNLAMDPVNLIN 128

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +V  VMPD TIILD+P ++ L R+  R     S   D  ER+++  + K R+ +L +A
Sbjct: 129 QFAVGNVMPDLTIILDVPPEVSLARINRRA----SDLPDRMERENIDFYHKVREGYLFLA 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++ P    ++D   +   VA +I + V +L+ K
Sbjct: 185 KSLPRAFLVLDGTQTEDEVAKHIWDEVLKLITK 217


>gi|83644968|ref|YP_433403.1| thymidylate kinase [Hahella chejuensis KCTC 2396]
 gi|123533767|sp|Q2SK46|KTHY_HAHCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|83633011|gb|ABC28978.1| thymidylate kinase [Hahella chejuensis KCTC 2396]
          Length = 208

 Score =  258 bits (659), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EGIEGAGKTT+++ ++  L+    +V +TREPGGTP AE  R +LL    +
Sbjct: 1   MKKGLFITVEGIEGAGKTTNLNFIRSILEESGEEVVMTREPGGTPMAEEVRELLLRPREE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              + AE ++  AAR  H+E  I+P +  G  +L DRF D++YAYQG         +  L
Sbjct: 61  AVSSTAELLLMFAARAQHLEQKIKPTIERGVHVLSDRFTDATYAYQGGGRGLSWAMIQDL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++      PD T++L +  + G+ R + R        LD FER+ +  +   ++ ++  
Sbjct: 121 EKLVQAGFKPDLTLLLRIDPETGMARARKR------GALDRFEREKLEFYFCVQEGYMKR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R  +VD+  S + V   I   +   +
Sbjct: 175 VAEDPERFLVVDAQQSLEEVQAAIAQGLAAKL 206


>gi|239943104|ref|ZP_04695041.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 15998]
          Length = 1042

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 469 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 528

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 529 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 588

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+      +R         +   D  E +    HE+ R  FL +A 
Sbjct: 589 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAEFHERVRSGFLTLAA 640

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    +S+ T + + + +L+
Sbjct: 641 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 670


>gi|71907819|ref|YP_285406.1| thymidylate kinase [Dechloromonas aromatica RCB]
 gi|123627287|sp|Q47DZ5|KTHY_DECAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71847440|gb|AAZ46936.1| thymidylate kinase [Dechloromonas aromatica RCB]
          Length = 204

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 8/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEGI+GAGK++H+  L   L+++   VHVTREPGGT   E  R +LL+   +  
Sbjct: 2   KGKFITFEGIDGAGKSSHVEWLAGLLRQRGIVVHVTREPGGTELGEKLRELLLN---EPM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR +H+  +I PAL  G+ ++CDRF D++YAYQG           +L+ 
Sbjct: 59  HLETETLLMFAARREHLARLIEPALARGEWVVCDRFSDATYAYQGGGRGLDRAKFLALEH 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T++ DLP+D+  +R+     +  +  LD FE++ V  HE+ RQ +L+ A 
Sbjct: 119 WVHGHLQPDLTLLFDLPLDVARERI-----VLANRVLDKFEQERVDFHERVRQAYLERAH 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R  ++D+  S +++   +  IV
Sbjct: 174 TSPSRIRVIDANQSIENIRKQLEQIV 199


>gi|116050964|ref|YP_790211.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122260093|sp|Q02PC5|KTHY_PSEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|115586185|gb|ABJ12200.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 210

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+ G +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG       + + +L+ 
Sbjct: 62  AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPERYQVLDAGLPLTEVQAGLDRLLPNLLER 207


>gi|302520927|ref|ZP_07273269.1| thymidylate kinase [Streptomyces sp. SPB78]
 gi|302429822|gb|EFL01638.1| thymidylate kinase [Streptomyces sp. SPB78]
          Length = 1202

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL      
Sbjct: 525 TTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAG 584

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G I++ DR++DSS AYQG       + +  + 
Sbjct: 585 LSHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARIS 644

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LD+  +   +R         +   D  E +    H + R  FL +A
Sbjct: 645 RWATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 696

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R  +VD A   +SV   + + + +L+
Sbjct: 697 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 727


>gi|88798792|ref|ZP_01114375.1| Thymidylate kinase [Reinekea sp. MED297]
 gi|88778555|gb|EAR09747.1| Thymidylate kinase [Reinekea sp. MED297]
          Length = 206

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 6/204 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG+EGAGKTT   +L  +L  +      TREPGGTP AE  R ++L+   +     
Sbjct: 5   FITIEGLEGAGKTTQAEVLCNWLTDRGISFVRTREPGGTPIAEKIRDLVLAHHDERMDPY 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  HVE +I+PAL+ G+ ++ DRF D++YAYQG   S    ++  L+++ +
Sbjct: 65  TELLMVFAARQQHVETLIKPALVNGQWVVSDRFTDATYAYQGGGRSLGANYIQQLEQLVL 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T   D     GL R + R        LD  E++ +    + R  +   A  QP
Sbjct: 125 GGFQPDTTFWFDCDAQTGLNRARAR------GSLDRIEQEALSFFNRARAAYEQRALQQP 178

Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209
            R   +D++ + ++V+  ++  + 
Sbjct: 179 QRFVRLDASQTVEAVSEQLIQALE 202


>gi|303257416|ref|ZP_07343429.1| dTMP kinase [Burkholderiales bacterium 1_1_47]
 gi|302859773|gb|EFL82851.1| dTMP kinase [Burkholderiales bacterium 1_1_47]
          Length = 202

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 11/211 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG++GAGK+T   ++   L+ +  D   TREPGG  +AE  R +LL+   + 
Sbjct: 3   KRGKFITVEGVDGAGKSTQFEVIANALKERGIDFVRTREPGGPQSAEKIRELLLN---EP 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ E +V  AAR +++  +IRPAL  GK +LCDRF D+S AYQG         ++ L 
Sbjct: 60  MTAKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLA 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                ++ PD T+I DLP ++   R+        S  LD FE++D   H + RQ +L+IA
Sbjct: 120 NFVHPDIKPDKTVIFDLPTEVAAARL--------SRKLDRFEQEDADFHRRVRQGYLEIA 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + +P+RC ++D+  + + V+  +L  V   V
Sbjct: 172 KREPERCVVIDAQGTPEEVSARVLKEVETWV 202


>gi|297543636|ref|YP_003675938.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296841411|gb|ADH59927.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 204

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  LK +L +K Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLD-KYNFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PA+ EGKI+L DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPAIKEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R         D  ER+    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLERESWDFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R   +D       V  +I++ V + +
Sbjct: 174 EYPKRFVFIDGMQEIVKVHQDIIDAVKKYL 203


>gi|308171919|ref|YP_003918624.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7]
 gi|307604783|emb|CBI41154.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7]
 gi|328551729|gb|AEB22221.1| thymidylate kinase [Bacillus amyloliquefaciens TA208]
 gi|328909989|gb|AEB61585.1| thymidylate kinase [Bacillus amyloliquefaciens LL3]
          Length = 212

 Score =  257 bits (658), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  + + V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKDILSAEGHPVTATREPGGIDIAEQIREVILNKNNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  H+   ++PAL EG+I+LCDRF+DSS AYQG         + S+  
Sbjct: 62  DAKTEALLYAAARRQHLVEKVQPALKEGRIVLCDRFIDSSLAYQGYARGLGIDEVFSINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ + MPD TI   +  + GLKR+ +     +S   +  + + +  H K R+ +  + +
Sbjct: 122 FAIGDTMPDVTIYFSIDPEEGLKRITSN----DSREKNRLDLEALHFHTKVREGYQKVMQ 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H +D++   + V  + L ++ E ++K
Sbjct: 178 RFPERFHTIDASRKKEFVIQDALQVINEALKK 209


>gi|221307837|ref|ZP_03589684.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312159|ref|ZP_03593964.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317092|ref|ZP_03598386.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221321355|ref|ZP_03602649.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767017|ref|NP_387909.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|239938655|sp|P37537|KTHY_BACSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225184644|emb|CAB11804.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 212

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG         + S+ E
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ ++MP  T+   +  + GLKR+    S  +    +  + + +  H K ++ + ++ +
Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 178 RFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209


>gi|315639687|ref|ZP_07894827.1| thymidylate kinase [Enterococcus italicus DSM 15952]
 gi|315484648|gb|EFU75104.1| thymidylate kinase [Enterococcus italicus DSM 15952]
          Length = 214

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SGLFI+ EG +GAGKTT ++ L   L+++ N  V  TREPGG   +E  R ++L    +E
Sbjct: 2   SGLFITIEGPDGAGKTTALNELFPRLEKETNRKVIATREPGGVRISEKIRDLILDPNNEE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  VI PAL  G I+LCDRF+DSS AYQG         +  + 
Sbjct: 62  MDVRTEALLYAAARRQHLIEVIMPALAAGHIVLCDRFVDSSLAYQGAGRRIGIESVAQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+ LD+  D GL+R+Q        A +D  E + +  H++ R  +L + 
Sbjct: 122 EFATEGLQPDFTLYLDIDSDEGLRRIQ----TSRKAGIDRLETEGLEFHQRVRHAYLKLV 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
             +P+R  ++ +    Q V      I+ 
Sbjct: 178 EKEPERFSLIHANQDVQEVVNECYTIIK 205


>gi|161506952|ref|YP_001576906.1| thymidylate kinase [Lactobacillus helveticus DPC 4571]
 gi|172048179|sp|A8YTF9|KTHY_LACH4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|160347941|gb|ABX26615.1| Thymidylate kinase [Lactobacillus helveticus DPC 4571]
 gi|328462877|gb|EGF34726.1| thymidylate kinase [Lactobacillus helveticus MTCC 5463]
          Length = 212

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +   +  +      VTREPGG+  AE  R ++L    D+
Sbjct: 2   RGYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AAAR  HVE +IRPAL EGKI+  DRF+DSS AYQGE        +  + 
Sbjct: 62  MDAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGEGRDLGIEEVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGL R+Q     +E    D  E++++  H+K    FL + 
Sbjct: 122 DFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLKVK 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              PDR   +D+    + V   ++  + + + +
Sbjct: 178 DLYPDRFVTIDATQPIEDVVNQVIATLEKRLPE 210


>gi|85859637|ref|YP_461839.1| thymidylate kinase [Syntrophus aciditrophicus SB]
 gi|123516788|sp|Q2LUB1|KTHY_SYNAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|85722728|gb|ABC77671.1| thymidylate kinase [Syntrophus aciditrophicus SB]
          Length = 219

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 1/216 (0%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FISFEGIEG GKTT + L  ++L+     V  T EPGGTP  +  R++LL+ G  E  AE
Sbjct: 4   FISFEGIEGCGKTTQLKLAAQYLRTLKIPVGTTEEPGGTPLGKKIRNILLNRGPFEICAE 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++F AAR  HV  VI P+L  G+ +LCDRF D++  YQG        ++  L   + 
Sbjct: 64  AETLLFVAARAQHVREVILPSLARGQWILCDRFSDATAVYQGCVRGIDEAWIRQLDSFAT 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             + P+ T++ DLP + GL R   R   + E++  D FE++ +  HEK R+ +L +AR +
Sbjct: 124 SFLKPNLTLLFDLPAETGLHRAMQRMTGIPENSREDRFEQEGLNFHEKIREGYLALARQE 183

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
            +R  I+++A    S+   +   +  L Q+  + L 
Sbjct: 184 SERFRIINAAADIPSIHREVCRHLDVLRQQPEAGLP 219


>gi|163760148|ref|ZP_02167231.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43]
 gi|162282547|gb|EDQ32835.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43]
          Length = 226

 Score =  257 bits (658), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 101/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+FEG EG GK+T I+ L + L+R+  DV VTREPGG+  AEA RHVLLS   +E
Sbjct: 4   SKGRFITFEGGEGVGKSTQINRLAKVLRRRGMDVLVTREPGGSLGAEAVRHVLLSGAAEE 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   EA++FAAAR DHVE VIRPAL EG I+LCDR++DSS  YQG   + +  F+ +L+
Sbjct: 64  FGIRMEAMLFAAARSDHVEEVIRPALAEGAIVLCDRYMDSSRVYQGVTGNLEPQFIVNLE 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+V  ++PD T+ILDLP + GL+R + R     +   D FE+++V  HEKRR+ F+D+ 
Sbjct: 124 RIAVNSMVPDLTLILDLPAEAGLRRAKARVGA--NVAPDRFEKEEVATHEKRREAFIDLT 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           R++P+RC ++++      VA  +L+ V  +++
Sbjct: 182 RSEPERCKLINADQPEDMVALAVLSTVEPVLE 213


>gi|116629043|ref|YP_814215.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323]
 gi|311111161|ref|ZP_07712558.1| dTMP kinase [Lactobacillus gasseri MV-22]
 gi|116094625|gb|ABJ59777.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323]
 gi|311066315|gb|EFQ46655.1| dTMP kinase [Lactobacillus gasseri MV-22]
          Length = 217

 Score =  257 bits (657), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ L + L ++  +   +TREPGG+  +E  R ++L     E
Sbjct: 6   RGYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKE 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG   +     +  + 
Sbjct: 66  MDDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQGVGRNLGVEAVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD TI LDL    GL R++       +   D  E++ +  H+K    + D+ 
Sbjct: 126 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHQKVYAGYTDLL 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  PDR   VD+    + VA N + I+ + +
Sbjct: 182 KRYPDRIKKVDANLPIKEVAANSVKIIRKQL 212


>gi|56418559|ref|YP_145877.1| thymidylate kinase [Geobacillus kaustophilus HTA426]
 gi|261417524|ref|YP_003251206.1| thymidylate kinase [Geobacillus sp. Y412MC61]
 gi|297528399|ref|YP_003669674.1| thymidylate kinase [Geobacillus sp. C56-T3]
 gi|319765181|ref|YP_004130682.1| thymidylate kinase [Geobacillus sp. Y412MC52]
 gi|73920820|sp|Q5L3W9|KTHY_GEOKA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56378401|dbj|BAD74309.1| thymidylate kinase [Geobacillus kaustophilus HTA426]
 gi|261373981|gb|ACX76724.1| thymidylate kinase [Geobacillus sp. Y412MC61]
 gi|297251651|gb|ADI25097.1| thymidylate kinase [Geobacillus sp. C56-T3]
 gi|317110047|gb|ADU92539.1| thymidylate kinase [Geobacillus sp. Y412MC52]
          Length = 214

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 4/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F SFEG EGAGKTT IS L+  L+ +  DV  TREPGG   AEA R ++L+    E 
Sbjct: 6   NGCFFSFEGPEGAGKTTMISKLESLLRERGIDVVATREPGGVRIAEAIRSIILNRDYTEM 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         +  + E
Sbjct: 66  DGRTEALLYAAARRQHLLEKIVPALEAGCVVLCDRFVDSSLAYQGFARGLGIEEVWKINE 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++   MP  TI  D+   IGL+R++ R   RE   ++  + + +  HEK R+ + ++AR
Sbjct: 126 FAIDGYMPSLTIYFDIDPQIGLERIR-RNRGRE---VNRLDLETLSFHEKVREGYRELAR 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              DR  ++D+      V       V   ++ R
Sbjct: 182 RFADRIVVIDANRPLDDVFAETTAAVLSRLKGR 214


>gi|115524871|ref|YP_781782.1| thymidylate kinase [Rhodopseudomonas palustris BisA53]
 gi|115518818|gb|ABJ06802.1| thymidylate kinase [Rhodopseudomonas palustris BisA53]
          Length = 229

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEG EGAGK+T I LL + L+R      +TREPGG+P AE  RH+LLS      
Sbjct: 11  RGRFISFEGGEGAGKSTQIKLLAQRLERAGLRTKITREPGGSPGAEIIRHLLLSGIGSLI 70

Query: 63  G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           G A AE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG   +     L++L+
Sbjct: 71  GGASAETVLFAAARDDHVHTVIAPALAQGTWVLCDRFSDSTRAYQGRLGAVPPALLNALE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++  + PD T+ILD+PV+ G++R   R   R  A  D FE + +  H   R+ +  IA
Sbjct: 131 RVTIDGLKPDLTLILDVPVETGVRRAAVR---RGDATPDRFEAEGLEFHRGLREAYRQIA 187

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            + P RC ++D+  + ++VA  + N V + +
Sbjct: 188 ADNPQRCVLIDADAALETVAERVWNAVRQRL 218


>gi|225871114|ref|YP_002747061.1| thymidylate kinase [Streptococcus equi subsp. equi 4047]
 gi|254808305|sp|C0M7M5|KTHY_STRE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225700518|emb|CAW94978.1| thymidylate kinase [Streptococcus equi subsp. equi 4047]
          Length = 211

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 5/209 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+FEG +GAGKTT +  L   LQ      +  TREPGG   AE  R ++L    
Sbjct: 1   MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I PAL  G ++L DRF+DSS AYQG         +  
Sbjct: 61  TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   V PD T+  D+P ++GL R+           ++  + + + +H++ R+ +L+
Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE----REINRLDLEQLDLHQRVRKGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A   P R   +D++   +SV +  L  +
Sbjct: 177 LALENPQRIVKIDASQDLESVVSAALAAI 205


>gi|254386206|ref|ZP_05001517.1| thymidylate kinase [Streptomyces sp. Mg1]
 gi|194345062|gb|EDX26028.1| thymidylate kinase [Streptomyces sp. Mg1]
          Length = 852

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 516 AGFFIALEGGDGAGKSTQVQALADWIRGKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 575

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 576 SNRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARISR 635

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LD+  +   +R         +   D  E +    H++ R  FL +A 
Sbjct: 636 WATGGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRAGFLTLAA 687

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    +SV+T + + +  ++
Sbjct: 688 ADPGRYLVVDAGQDPESVSTVVRHRLDRML 717


>gi|291446581|ref|ZP_06585971.1| integral membrane protein with kinase activity [Streptomyces
           roseosporus NRRL 15998]
 gi|291349528|gb|EFE76432.1| integral membrane protein with kinase activity [Streptomyces
           roseosporus NRRL 15998]
          Length = 1070

 Score =  257 bits (657), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 557 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+      +R         +   D  E +    HE+ R  FL +A 
Sbjct: 617 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAEFHERVRSGFLTLAA 668

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    +S+ T + + + +L+
Sbjct: 669 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 698


>gi|49474220|ref|YP_032262.1| thymidylate kinase [Bartonella quintana str. Toulouse]
 gi|59798258|sp|Q6FZU8|KTHY_BARQU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49239724|emb|CAF26103.1| Thymidylate kinase [Bartonella quintana str. Toulouse]
          Length = 214

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 92/214 (42%), Positives = 139/214 (64%), Gaps = 2/214 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG GKTT ISLL ++L+ + YDV  TREPGGT  AEA RH+LLS     +
Sbjct: 2   SGYFITFEGGEGVGKTTQISLLAQYLRNQGYDVLTTREPGGTVGAEAIRHILLSGQAQNY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E I+  AAR+DH+  VI P+L +GKI+LCDRF+DS+  YQG  ++     L  L+ 
Sbjct: 62  GPLIEVILLTAARIDHITEVIAPSLQKGKIVLCDRFIDSTRVYQGLNNTVGSSVLSVLEY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++  +MP  T +LD+P   G++R   R   +++  +DYFE+ ++ I E+RRQ FL +A+
Sbjct: 122 VALNGIMPCLTFLLDIPARCGMERANLR--RKKAETIDYFEKDELKIQEQRRQAFLQLAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +P R  ++D+  + + +A  I NI  +++  +V
Sbjct: 180 QEPHRFRVIDATGAMEVIAQQIKNICHQVILDQV 213


>gi|260102441|ref|ZP_05752678.1| dTMP kinase [Lactobacillus helveticus DSM 20075]
 gi|260083761|gb|EEW67881.1| dTMP kinase [Lactobacillus helveticus DSM 20075]
          Length = 216

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +   +  +      VTREPGG+  AE  R ++L    D+
Sbjct: 6   RGYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AAAR  HVE +IRPAL EGKI+  DRF+DSS AYQGE        +  + 
Sbjct: 66  MDAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGEGRDLGIEEVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGL R+Q     +E    D  E++++  H+K    FL + 
Sbjct: 126 DFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLKVK 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              PDR   +D+    + V   ++  + + + +
Sbjct: 182 DLYPDRFVTIDATQPIEDVVNQVIATLEKRLPE 214


>gi|167768112|ref|ZP_02440165.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1]
 gi|317499447|ref|ZP_07957714.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167709636|gb|EDS20215.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1]
 gi|291559963|emb|CBL38763.1| thymidylate kinase [butyrate-producing bacterium SSC/2]
 gi|316893319|gb|EFV15534.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 208

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 124/207 (59%), Gaps = 6/207 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG +GAGKTT I LL+ +L  K YD+ V REPGGTP +EA R+V+L+    E G
Sbjct: 2   GLFLTVEGPDGAGKTTQIELLRDYLSDKGYDIIVCREPGGTPISEAVRNVILNKEFTEMG 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR   +E VIRPAL +GKI++CDRF++SS  YQG         +  + + 
Sbjct: 62  HMTELLLYAAARAQLIEEVIRPALEDGKIVICDRFVESSAVYQGIARGMGIDLVYKVNQF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ + MPD TI++DL  + G+ R +        A LD  E + +  H+K  + +  +A  
Sbjct: 122 AIGDTMPDLTIMIDLDAEAGISRKKK------QAELDRMESETIDFHKKVVEGYRQLASL 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
            PDR + VD + + + +   I++ V +
Sbjct: 176 HPDRIYTVDGSLTIEEIHQKIVSQVNK 202


>gi|218781657|ref|YP_002432975.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01]
 gi|218763041|gb|ACL05507.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01]
          Length = 220

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 2/217 (0%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+  G+FI+ EGIEGAGKTT +  +  F++ + Y+   TREPGGT      R +LL+   
Sbjct: 1   MSRPGVFITLEGIEGAGKTTQVGRILEFMESQGYECISTREPGGTGIGAKIRAILLNSEH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                 AE +++ A R  H+  +I+PAL  GK ++CDRF D++ AYQG        F++ 
Sbjct: 61  VTLAPLAELLLYEADRAQHLARLIKPALEAGKCVVCDRFCDATTAYQGYARELSLDFINE 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFL 178
           L    +  + PD T++ DLP +IGL R + R   + +   +  FE +D+  H K RQ +L
Sbjct: 121 LHARILDGLTPDLTLLFDLPAEIGLSRAKTRLHEQNNTSQEGRFEAEDLAFHRKVRQGYL 180

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A+ +P R  IV++  +   V      ++ E   KR
Sbjct: 181 TLAKAEPGRFAIVNADAAPDRVWEETKELLAEFTAKR 217


>gi|293365189|ref|ZP_06611906.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
 gi|307703727|ref|ZP_07640668.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
 gi|291316639|gb|EFE57075.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
 gi|307622562|gb|EFO01558.1| thymidylate kinase [Streptococcus oralis ATCC 35037]
          Length = 212

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVSIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFDRM 208


>gi|318076468|ref|ZP_07983800.1| thymidylate kinase [Streptomyces sp. SA3_actF]
          Length = 896

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL      
Sbjct: 223 TTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAG 282

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G I++ DR++DSS AYQG       + +  + 
Sbjct: 283 LSHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARIS 342

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LD+  +   +R         +   D  E +    H + R  FL +A
Sbjct: 343 RWATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 394

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R  +VD A   +SV   + + + +L+
Sbjct: 395 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 425


>gi|254464514|ref|ZP_05077925.1| thymidylate kinase [Rhodobacterales bacterium Y4I]
 gi|206685422|gb|EDZ45904.1| thymidylate kinase [Rhodobacterales bacterium Y4I]
          Length = 215

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+FEGI+G+GK+T   LL   L+    DV +TREPGG+P AE  R ++L    D 
Sbjct: 6   TRGLFITFEGIDGSGKSTQCRLLAEALRAAGRDVVLTREPGGSPGAEEIRRLVLEGDPDR 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D + 
Sbjct: 66  WSAETELLLFMAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRAAVDQMH 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD T+++D+    GL R + R    E      FE   V + EK R  FL +A
Sbjct: 126 RLMIGR-EPDLTLLIDMDPAEGLARAKGRQGKEE-----RFEDFGVELQEKMRAGFLALA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +   DR  +VD A   + VA ++  +  + ++
Sbjct: 180 QEFADRFRVVDGARPVEEVAADVRRLAEDALE 211


>gi|282852748|ref|ZP_06262090.1| dTMP kinase [Lactobacillus gasseri 224-1]
 gi|282556490|gb|EFB62110.1| dTMP kinase [Lactobacillus gasseri 224-1]
          Length = 213

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ L + L ++  +   +TREPGG+  +E  R ++L     E
Sbjct: 2   RGYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GKI+L DRF+DSS AYQG   +     +  + 
Sbjct: 62  MDDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQGVGRNLGVEAVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD TI LDL    GL R++       +   D  E++ +  H+K    + D+ 
Sbjct: 122 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHQKVYAGYTDLL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  PDR   VD+    + VA N + I+ + +
Sbjct: 178 KRYPDRIKKVDANLPIKEVAANSVKIIRKQL 208


>gi|327182908|gb|AEA31355.1| thymidylate kinase [Lactobacillus amylovorus GRL 1118]
          Length = 212

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G F+SFEG +GAGK+T +  +L +   +      VTREPGG+  AE  R ++L    D+
Sbjct: 2   TGYFVSFEGPDGAGKSTVLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPANDK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AAAR  HVE +I+PAL  GKI+  DRF+DSS AYQGE        +  + 
Sbjct: 62  MDAKTEALLYAAARSQHVEEIIKPALTAGKIVFSDRFVDSSLAYQGEGRDLGIKEVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  +D+  +IGL R+Q     +E    D  E++++  H K  Q FL + 
Sbjct: 122 DFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHTKVYQGFLKVR 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P+R   +D       V   ++  + + + +
Sbjct: 178 AMYPERFVTIDGTQPIDQVVDQVIATLKQRMPE 210


>gi|82702516|ref|YP_412082.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196]
 gi|123544544|sp|Q2Y981|KTHY_NITMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|82410581|gb|ABB74690.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196]
          Length = 205

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 7/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EGI+GAGKTTH+  L+ FL+ +  +V VTREPGGTP  EA R +LL       
Sbjct: 2   RGKFITLEGIDGAGKTTHLRWLEYFLKERGKNVMVTREPGGTPLGEALRDILLDSRQT-M 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA++  AAR +H++ VI PAL  G+ ++ DRF D+S+AYQG         L+ L+ 
Sbjct: 61  HAETEALLMFAARREHLDKVILPALSRGEWVISDRFTDASFAYQGGGRGLSLQKLNELEC 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E  PD T+ LD+ +  G +R  N          D FE++      + R+ +L+ A+
Sbjct: 121 WVQGEFQPDVTLYLDVSIASGRQRTSN------IRQADRFEKEQDEFFRRVREAYLERAK 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P+R  ++D+  S + V  ++   +
Sbjct: 175 EFPERIRVIDANQSLEDVRRSVEKSI 200


>gi|269468275|gb|EEZ79959.1| thymidylate kinase [uncultured SUP05 cluster bacterium]
          Length = 205

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 6/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ +G+EGAGK+T I+ +  +L+ K  +V +TREPGGT   E  R +LLS    
Sbjct: 1   MQKGKFITIDGVEGAGKSTQINFICGYLKDKGINVALTREPGGTELGEKIRTLLLSPKTK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E ++  AAR +H+   I P L +G  +L DRF D+SYAYQG         +  L
Sbjct: 61  SMHSDTELLLMFAARNEHIHAKIMPILEKGDWVLSDRFTDASYAYQGGGRGLDVDRIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E  +Q+  PD T++LD+PV++G+ RV++R         D  E +D+    + R  ++  
Sbjct: 121 EEWVLQDFTPDMTLLLDVPVELGMSRVESR------GEKDRIELEDMDFFNRVRDAYISR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++  PDR  ++DS+ + +     I  I+  L
Sbjct: 175 SKQFPDRIKLIDSSETVEHTKEQIKIILDSL 205


>gi|291482399|dbj|BAI83474.1| thymidylate kinase [Bacillus subtilis subsp. natto BEST195]
          Length = 212

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG         + S+ E
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ ++MP  T+   +  + GLKR+    S  +    +  + + +  H K ++ + ++ +
Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 178 RFPERFHSVDAGQSKGLVVQDVLKVIDEALKK 209


>gi|90415870|ref|ZP_01223803.1| thymidylate kinase [marine gamma proteobacterium HTCC2207]
 gi|90332244|gb|EAS47441.1| thymidylate kinase [marine gamma proteobacterium HTCC2207]
          Length = 208

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG EG GKTT+I  ++ ++  K      TREPGGTP AE  R +LL+   +  
Sbjct: 2   RGKFITIEGTEGVGKTTNIKFIQDWMDSKKLTYGCTREPGGTPLAEQVRELLLAPREESV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR  H+  VI P L EG  +LCDRF D++YAYQG     +   +  L+ 
Sbjct: 62  CNTAELLMVFAARAQHLNQVIEPMLGEGAWVLCDRFTDATYAYQGAGRHMRDDLIRDLEL 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    + PD T+ILD+PV IGL R   R      +  D FE++ V   E+ R  +L IA+
Sbjct: 122 MVQGSLQPDLTLILDIPVQIGLARASER------STPDRFEQEQVAFFERVRNRYLQIAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + P RC ++D++ + + V   I   +    +
Sbjct: 176 DNPQRCVVIDASLTLEGVQAQITQTLETFWE 206


>gi|182437093|ref|YP_001824812.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326777708|ref|ZP_08236973.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1]
 gi|178465609|dbj|BAG20129.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326658041|gb|EGE42887.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1]
          Length = 1084

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 506 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+      +R         +   D  E +    HE+ R  FL +A 
Sbjct: 626 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAAFHERVRSGFLTLAA 677

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    +S+ T + + + +L+
Sbjct: 678 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 707


>gi|295402004|ref|ZP_06811966.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976006|gb|EFG51622.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 210

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 4/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F SFEG EGAGKTT I++L+ FL+ K +DV  TREPGG   AE  R ++L+    E 
Sbjct: 2   KGRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PA+  GKI+LCDRF+DSS AYQG         +  + +
Sbjct: 62  DGRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQGFARELGMDEILQINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++    P  TI  D+   IGL+R+Q      +   ++  + +++  H K R+ +L +A+
Sbjct: 122 FAIDGYFPTLTIYFDIDPKIGLERIQKN----KQREMNRLDMENLSFHYKVREGYLKLAK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              DR   +D++ S   V    +  + + + +R
Sbjct: 178 RFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210


>gi|323465901|gb|ADX69588.1| Thymidylate kinase [Lactobacillus helveticus H10]
          Length = 216

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 5/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +GAGK+T +  +   +  +      VTREPGG+  AE  R ++L    D+
Sbjct: 6   RGYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AAAR  HVE +IRPAL +GKI+  DRF+DSS AYQGE        +  + 
Sbjct: 66  MDAKTEALLYAAARSQHVEEIIRPALSDGKIVFSDRFVDSSLAYQGEGRDLGIEEVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  ++ PD T  LD+  +IGL R+Q     +E    D  E++++  H+K    FL + 
Sbjct: 126 DFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLKVK 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              PDR   +D+    + V   ++  + + + +
Sbjct: 182 DLYPDRFVTIDATQPIEDVVNQVIATLEKRLPE 214


>gi|282901980|ref|ZP_06309878.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
 gi|281193067|gb|EFA68066.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505]
          Length = 216

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62
           G  I FEG+EG+GKTT + +L ++LQ       +TREPGGT   +  R +LL    ++  
Sbjct: 3   GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTHLGQNLRKLLLETFYEQPL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++ A R  HV ++I+P L  GK +LCDR+ +S+ AYQG       + +D L +
Sbjct: 63  DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTVAYQGYGRGLNMIIIDQLNQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   +  D TI LD+ V+IGL R       R  A LD  E++ +  H + ++ +  IA+
Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQEGYNKIAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N P +   VD     + V  NI  I+
Sbjct: 177 NHPSKIIRVDGNREPELVQENIRKIL 202


>gi|295425167|ref|ZP_06817871.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664]
 gi|295065143|gb|EFG56047.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664]
          Length = 216

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 111/211 (52%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FIS EG +GAGK++ +  +L     + N    VTREPGG+  AE  R ++L     +
Sbjct: 6   KGYFISLEGPDGAGKSSVLEQVLNEIGPQLNTQYLVTREPGGSRIAEKIRQIILDPANVK 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  HVE ++RPAL  GK++  DRF+DSS AYQG         +  + 
Sbjct: 66  MDDRTEALLYAAARSQHVEEIVRPALAAGKVVFSDRFVDSSLAYQGAGRDLGIDQVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   + PD T+  DL   IGL R+Q     +E    D  E++ +  HEK    +  IA
Sbjct: 126 EFATGGIEPDLTLFFDLDPKIGLARIQKLRPDQE----DRLEQEKLAFHEKVYAGYQKIA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R  PDR   +D++  F  V    + I+ + +
Sbjct: 182 RQNPDRIVKIDASQPFDQVEAETIAIIKKRL 212


>gi|83593038|ref|YP_426790.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170]
 gi|83575952|gb|ABC22503.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170]
          Length = 214

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 82/223 (36%), Positives = 119/223 (53%), Gaps = 9/223 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT +S L + L     +V  TREPGG+P AEA R +L++ G +
Sbjct: 1   MTGGRFITLEGGEGAGKTTQLSRLAQALAPLVPEVVTTREPGGSPGAEAIRGLLVAGGAE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    EA++ AAAR DH+   + PAL  G  ++CDRF DS+ AYQG         LD+L
Sbjct: 61  RWDPRGEALLHAAARRDHLLRTVWPALARGAWVVCDRFADSTSAYQGGGHGLPQDELDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                    PD T+I DLPV +GL R   R         D +ER D   H++    +  I
Sbjct: 121 HAFVCGGFQPDLTVIFDLPVAVGLARAGRR-----GGGEDRYERMDPAFHQRLFDRYHAI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           A   P+RC ++++  + ++V   +  +V E    R   L+ ++
Sbjct: 176 ASAFPERCRLIEADGAIEAVHARLWAVVLE----RFPELTERR 214


>gi|258513464|ref|YP_003189686.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777169|gb|ACV61063.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771]
          Length = 233

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 18/228 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAARHV 53
            G+FI FEGI+G+GKTT I++L + L + N           V +TREPGGT  +E  R++
Sbjct: 2   RGVFIVFEGIDGSGKTTQINILYKNLLQHNRIKNQPAGSEYVLLTREPGGTATSELIRNI 61

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           LL+   D+  A  EA+++AAAR  HVE  IRPAL  GKI++CDRF+DSS AYQG      
Sbjct: 62  LLNPANDKLCARTEALLYAAARAQHVEERIRPALSSGKIVICDRFIDSSLAYQGYGRGQD 121

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             FL +L +++   + PD TI+LDLPV   LKR+ NR         D  E + V  +E+ 
Sbjct: 122 LSFLHNLNQLAAGGLKPDLTILLDLPVGAALKRLNNRQVS--GIEKDRLESEAVSFYERV 179

Query: 174 RQIFLDIARNQPDR-------CHIVDSAHSFQSVATNILNIVWELVQK 214
           R+ +L IA    D          +V++      V+  I++ V   + K
Sbjct: 180 REGYLKIAGTGIDNNSAGSGGYLVVNADQELNKVSDRIIDGVGNCLPK 227


>gi|152985503|ref|YP_001347571.1| thymidylate kinase [Pseudomonas aeruginosa PA7]
 gi|166223103|sp|A6V3D6|KTHY_PSEA7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150960661|gb|ABR82686.1| thymidylate kinase [Pseudomonas aeruginosa PA7]
          Length = 210

 Score =  256 bits (656), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EGAGK+T+   L   L+ +  +V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFVTLEGPEGAGKSTNRDYLAERLRERGVEVQLTREPGGTPLAERIRELLLAPSDEPM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF D++YAYQG         + +L+ 
Sbjct: 62  AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++D    E  RQ +L  A 
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D+      V   +  ++  L+++
Sbjct: 176 QAPQRYQVLDAGLPLAEVQAGLDRLLPNLLER 207


>gi|289577348|ref|YP_003475975.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
 gi|289527061|gb|ADD01413.1| thymidylate kinase [Thermoanaerobacter italicus Ab9]
          Length = 204

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  LK +L +K Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLD-KYNFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PA+ EGKI+L DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R         D  ER+    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLERESWDFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R   ++       V  +I++ V + +
Sbjct: 174 EYPKRFVFINGMQEIVKVHQDIIDAVKKYL 203


>gi|295837412|ref|ZP_06824345.1| dTMP kinase [Streptomyces sp. SPB74]
 gi|295826517|gb|EDY43005.2| dTMP kinase [Streptomyces sp. SPB74]
          Length = 1172

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G F++ EG +GAGK+T    L  +++ K ++V +TREPG TP  +  R +LL      
Sbjct: 492 TNGFFLALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAG 551

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R +HV+ V+RPAL  G +++ DR++DSS AYQG       + +  + 
Sbjct: 552 LSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPVEIARIS 611

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A
Sbjct: 612 RWATGGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRTGFLTLA 663

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R  +VD A   +SV   + + + +L+
Sbjct: 664 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 694


>gi|92113730|ref|YP_573658.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043]
 gi|122420045|sp|Q1QX49|KTHY_CHRSD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91796820|gb|ABE58959.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043]
          Length = 212

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           M  G FI+ EG EG GK+T+++ +  +L  +  +V  TREPGGTP AEA R +LL     
Sbjct: 1   MTPGRFITLEGGEGVGKSTNVAFVCDWLSARGIEVVRTREPGGTPRAEAIRELLLDPAPQ 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +     AE ++  AAR  H+   IRPAL  G  ++CDRF D+++AYQG         + +
Sbjct: 61  EPLDETAELLLMFAARAQHLAARIRPALARGAWVVCDRFTDATFAYQGGGRGLDETRIAT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+ +  Q + PD T++LD+PV+   +RV+ R   R     D FER+        R+ +L 
Sbjct: 121 LEALVQQGLQPDLTLLLDMPVEAAQRRVERRGIER-----DRFERERGAFFNAVRESYLA 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            A   P R  ++D+  S ++V  +I   + E +
Sbjct: 176 RAAQAPTRFAVIDADRSLEAVQASIAAHLTERL 208


>gi|330718537|ref|ZP_08313137.1| thymidylate kinase [Leuconostoc fallax KCTC 3537]
          Length = 217

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 5/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FISFEG EGAGKT+ +  L   L      D+  TREPGG P AEA R +L     
Sbjct: 1   MSEAKFISFEGPEGAGKTSVLQALIGELGPMLGDDLVTTREPGGNPIAEAIRAILQPEED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++AAAR  H+   I+PAL  GK+++ DR++DSS AYQG         + +
Sbjct: 61  NGMDKRTEALLYAAARRQHLVETIQPALAAGKVVISDRYIDSSLAYQGGGRDLGVDRIWT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + + + ++PD TI LD+P DIGLKRV           +D  +++D+  H K R  +L 
Sbjct: 121 LNQFATEGLLPDLTIYLDVPADIGLKRVMQ----HRQGKIDRLDKEDLSFHIKVRNTYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +    PDR  ++D+    + V T    ++W+ ++ R
Sbjct: 177 LRDQFPDRIQVIDATQPLEMVITATRALIWQQLKNR 212


>gi|307265699|ref|ZP_07547252.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919343|gb|EFN49564.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 203

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  L+ +L ++ Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PAL +G+I++ DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R         D  E++    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLEKESWEFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R   +D       V  +I+++V + +
Sbjct: 174 EFPKRFVFIDGMQELMKVHQDIIDVVKKYL 203


>gi|23336149|ref|ZP_00121376.1| COG0125: Thymidylate kinase [Bifidobacterium longum DJO10A]
 gi|189440137|ref|YP_001955218.1| thymidylate kinase [Bifidobacterium longum DJO10A]
 gi|238692075|sp|B3DUA1|KTHY_BIFLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189428572|gb|ACD98720.1| Thymidylate kinase [Bifidobacterium longum DJO10A]
          Length = 206

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL     G 
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ          + S
Sbjct: 62  VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++PD T +LD+   +   R+++          D  E        + RQ FLD
Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHNRLEH--------AEDRMESAGSDFQSRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +A  +P+R  ++D++ S ++V   I + + EL
Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205


>gi|262368570|ref|ZP_06061899.1| thymidylate kinase [Acinetobacter johnsonii SH046]
 gi|262316248|gb|EEY97286.1| thymidylate kinase [Acinetobacter johnsonii SH046]
          Length = 199

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 78/205 (38%), Positives = 109/205 (53%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  +   L+++   V +TREPGGTP AE  R +LLS   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIYEHLEQQGQQVVLTREPGGTPMAEQIRSLLLSVNHEESMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL + K +LCDRF D+S+AYQ          L  L E 
Sbjct: 61  NDTELLLMYAARAQHLQQVIVPALTKHKTVLCDRFTDASFAYQCAGRGLSQSKLQLLNE- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MPD T  LD P++ G+ R + R        LD FE++ V   EK R  +  +   
Sbjct: 120 NFVSHMPDITFWLDAPIETGMSRARER------GALDRFEQEKVTFFEKVRAGYQQLWEQ 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            P+R   +D+  S + V    L  +
Sbjct: 174 YPERVKRLDATQSPEQVFAQALQYL 198


>gi|148992933|ref|ZP_01822552.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|168483004|ref|ZP_02707956.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00]
 gi|168490250|ref|ZP_02714449.1| thymidylate kinase [Streptococcus pneumoniae SP195]
 gi|147928385|gb|EDK79401.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|172043528|gb|EDT51574.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00]
 gi|183571397|gb|EDT91925.1| thymidylate kinase [Streptococcus pneumoniae SP195]
 gi|332073266|gb|EGI83745.1| thymidylate kinase [Streptococcus pneumoniae GA17570]
          Length = 212

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|167038531|ref|YP_001666109.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167038727|ref|YP_001661712.1| dTMP kinase [Thermoanaerobacter sp. X514]
 gi|256751401|ref|ZP_05492280.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913688|ref|ZP_07131005.1| thymidylate kinase [Thermoanaerobacter sp. X561]
 gi|307723297|ref|YP_003903048.1| thymidylate kinase [Thermoanaerobacter sp. X513]
 gi|320116927|ref|YP_004187086.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|238687559|sp|B0K119|KTHY_THEPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687643|sp|B0K7K7|KTHY_THEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166852967|gb|ABY91376.1| dTMP kinase [Thermoanaerobacter sp. X514]
 gi|166857365|gb|ABY95773.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|256749783|gb|EEU62808.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890373|gb|EFK85518.1| thymidylate kinase [Thermoanaerobacter sp. X561]
 gi|307580358|gb|ADN53757.1| thymidylate kinase [Thermoanaerobacter sp. X513]
 gi|319930018|gb|ADV80703.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 203

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  L+ +L ++ Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   KGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PA+ EGKI+L DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKVVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R         D  ER+    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLERESWDFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R   +D       V  +I+++V + +
Sbjct: 174 EFPKRFVFIDGMQELMKVHKDIIDVVKKYL 203


>gi|306825448|ref|ZP_07458788.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432386|gb|EFM35362.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 212

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRIVKIDASLPLEEVVEATKAVLFDRM 208


>gi|322376438|ref|ZP_08050931.1| dTMP kinase [Streptococcus sp. M334]
 gi|321282245|gb|EFX59252.1| dTMP kinase [Streptococcus sp. M334]
          Length = 212

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    +      ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETAKAVLFDRM 208


>gi|297172305|gb|ADI23282.1| thymidylate kinase [uncultured actinobacterium HF0770_13M05]
          Length = 208

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 8/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG+EG GKTT+I  L+  L++K  DV VTREPGGTP AE  R VLL    +
Sbjct: 1   MTRGRFITLEGVEGVGKTTNIGFLREILEQKGIDVLVTREPGGTPLAEEVREVLLQMRDE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++  AAR  HV  VI PAL +G+ +LCDR+ D++YAYQG         L+ L
Sbjct: 61  SMDPITEALLIFAARSQHVSAVIEPALNDGRWVLCDRYTDATYAYQGGGRGVPLDTLERL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +   + PD TI LD PV+I L R+ +R         D FE +D     + R  +L I
Sbjct: 121 AEFAQGSLWPDLTIFLDAPVNIALGRIADRQH-------DRFESEDSEFFARVRAGYLAI 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              + +R  ++D+  S + V + +  ++   ++
Sbjct: 174 VERE-ERAVLIDATRSLEDVQSRLAELINNFLE 205


>gi|283768611|ref|ZP_06341523.1| dTMP kinase [Bulleidia extructa W1219]
 gi|283105003|gb|EFC06375.1| dTMP kinase [Bulleidia extructa W1219]
          Length = 225

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI+ EG +G+GK+T    + + LQ++ Y + +TREPGG+  AE  R ++L     
Sbjct: 16  MKKALFITIEGPDGSGKSTVSQTVCQRLQQEGYRLQLTREPGGSKIAEQIRSIILDPQNT 75

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A  EA+++AA+R  H+ + + PAL  G  ++ DRF+DSS AYQG         +  +
Sbjct: 76  DMDARTEALLYAASRRQHLMDKVLPALENGIPVISDRFVDSSLAYQGVGRCIGIEPVWLI 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++  +PD TI LD+  + GL+R+Q          LD  ++++   H +  Q +  I
Sbjct: 136 NEFAIEGCLPDKTIYLDIDAETGLRRIQK-----GRNQLDRLDQEEASFHTRVFQGYQTI 190

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +  PDR   VD+    + V  +   ++  L+  +
Sbjct: 191 LKRFPDRFIKVDARQGLEKVVEDTYVVLKGLLDAQ 225


>gi|225181529|ref|ZP_03734971.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1]
 gi|225167777|gb|EEG76586.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1]
          Length = 209

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/214 (35%), Positives = 109/214 (50%), Gaps = 7/214 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG +GAGKTT ++ L    ++    V  TREPGGTP  +A R +LL     
Sbjct: 1   MKKGFFITLEGPDGAGKTTQLTRLADAARQMGIQVVCTREPGGTPVGDAVRRILLDTAYS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E  ++AAAR      VI PAL +G+++LCDRF+DS+ AYQ         F+   
Sbjct: 61  EMVPLTEVFLYAAARAQLFHQVIGPALKQGQLVLCDRFIDSTLAYQSYGGEMDFSFVLET 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V   +PD T +LD+   +G++R       R S   D  E+K +  H + R  FL +
Sbjct: 121 NLQAVSHRLPDLTFVLDIDPSVGVER-------RGSGTADRVEQKALSFHHRVRDGFLSL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A   P+R  +V    S   V   I N V  L++K
Sbjct: 174 ADKFPERIKVVKGTQSEDEVFAVIWNQVAPLLEK 207


>gi|294787169|ref|ZP_06752422.1| dTMP kinase [Parascardovia denticolens F0305]
 gi|315227293|ref|ZP_07869080.1| thymidylate kinase [Parascardovia denticolens DSM 10105]
 gi|294484525|gb|EFG32160.1| dTMP kinase [Parascardovia denticolens F0305]
 gi|315119743|gb|EFT82876.1| thymidylate kinase [Parascardovia denticolens DSM 10105]
          Length = 226

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 10/218 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FISFEG++G GK+T +  L+ +L  +   V VTREPGGTP  E  R +LL    +   
Sbjct: 3   GFFISFEGVDGVGKSTQVKRLEAYLLEQGRSVLVTREPGGTPLGERIRQILLHGEDEA-- 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AA+R  HV   IRPAL  G +++ DR++DSS AYQ          +  L   
Sbjct: 61  PRTEALLYAASRAQHVAQKIRPALDSGALVISDRYIDSSLAYQAGGRELTLADVRRLNSW 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ PD T +LD+      +R+Q           D  E       ++ RQ FL +A  
Sbjct: 121 ATGDLWPDRTYLLDMSFQQSRQRLQ--------GEPDRLESSGGAFFDRARQAFLALAEG 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           +PDR  ++D++     V   I      L+    SPL+S
Sbjct: 173 EPDRFRVIDASQPIDQVWQAIKTDADGLLAGLPSPLAS 210


>gi|311744559|ref|ZP_07718359.1| thymidylate kinase [Aeromicrobium marinum DSM 15272]
 gi|311312178|gb|EFQ82095.1| thymidylate kinase [Aeromicrobium marinum DSM 15272]
          Length = 217

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+F++ EG EG GK+T   LL  +L  + + V VTREPGGTP     R ++L       
Sbjct: 7   SGVFVALEGGEGGGKSTQSGLLASWLTERGHQVLVTREPGGTPVGSQLRRIVLDPATGAL 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  EA+++AA + +HVE ++ PAL  G+++L DR++DS+ AYQG   +     L+ +  
Sbjct: 67  NSRTEALIYAADKAEHVEALVLPALAAGQVVLTDRYVDSTLAYQGAGRAIDVQELEHVAR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  ++ P  T++LD+   +GL R             D  E + +  H + R+ FL +A 
Sbjct: 127 WATADLRPHLTVVLDIDPVVGLARA---------GEPDRIEAEPLAFHRRVREHFLRLAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             PD   +VD+    + V  +I   +   + +
Sbjct: 178 ADPDHYLVVDADRPAEQVQADIRGALTPWLSR 209


>gi|320334977|ref|YP_004171688.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211]
 gi|319756266|gb|ADV68023.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211]
          Length = 209

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 76/215 (35%), Positives = 112/215 (52%), Gaps = 7/215 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++GLFI+FEG EGAGK+T +  L   L        +TREPGGTP     R VLL     
Sbjct: 1   MSAGLFITFEGPEGAGKSTQVRALTAHLAALGVPHTLTREPGGTPFGTRVRDVLLDP-TL 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++++A+R   V +VIRPAL  G++++CDR+ DSS AYQG         L  +
Sbjct: 60  QIDPLPEFLLYSASRAQLVTDVIRPALARGEVVICDRYFDSSLAYQGGGRGLSSELLRRI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + P  T +LDL   +GL RV  R         D  ER D+  H + R  FLD+
Sbjct: 120 THEATGGLTPHLTFLLDLDPSVGLGRVAAR------GQPDRLERADLDFHTRVRARFLDL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A  +P R  ++D+    ++++ +I   V   +  R
Sbjct: 174 AAAEPARFEVLDATRPQEALSAHITARVDARLPAR 208


>gi|55820572|ref|YP_139014.1| thymidylate kinase [Streptococcus thermophilus LMG 18311]
 gi|55822462|ref|YP_140903.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066]
 gi|116627381|ref|YP_820000.1| thymidylate kinase [Streptococcus thermophilus LMD-9]
 gi|81559719|sp|Q5M0Z9|KTHY_STRT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|81560889|sp|Q5M5I6|KTHY_STRT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122268018|sp|Q03LW8|KTHY_STRTD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|55736557|gb|AAV60199.1| thymidylate kinase [Streptococcus thermophilus LMG 18311]
 gi|55738447|gb|AAV62088.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066]
 gi|116100658|gb|ABJ65804.1| thymidylate kinase [Streptococcus thermophilus LMD-9]
          Length = 209

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKT+ + +L   L+      V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L  G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GL R+           ++  + + + +H++ RQ +LD
Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE----REVNRLDLEKLDMHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A  +P+R   +D++ + + V  +   I+   +
Sbjct: 177 LAEAEPERIKRIDASQTLEEVVEDTWEIIKSYL 209


>gi|254514398|ref|ZP_05126459.1| thymidylate kinase [gamma proteobacterium NOR5-3]
 gi|219676641|gb|EED33006.1| thymidylate kinase [gamma proteobacterium NOR5-3]
          Length = 210

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 6/208 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EGAGK+T ++ ++R L+    D+  TREPGGT   E  R  LL+        
Sbjct: 1   MFITLEGGEGAGKSTAMTYVERGLREAGVDLICTREPGGTRLGEQLRETLLAPSETGINP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++  AAR  H+   I PAL  G+ +LCDRF D+SYAYQG   +     +  L+E+ 
Sbjct: 61  LAELLMMFAARAQHLSECILPALGRGQWVLCDRFTDASYAYQGAGRNMGESPVAVLEELV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T++LD+P + GL R + R        LD FE++D    E+ RQ +L  A+  
Sbjct: 121 QGGLRPDLTLLLDVPSETGLSRARGR------GALDRFEQEDHAFFERVRQSYLSRAKRS 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
             R  I+D++    +V   +  +V +L+
Sbjct: 175 SGRYQIIDASADLAAVEQALEAVVQDLL 202


>gi|254434496|ref|ZP_05048004.1| thymidylate kinase [Nitrosococcus oceani AFC27]
 gi|207090829|gb|EDZ68100.1| thymidylate kinase [Nitrosococcus oceani AFC27]
          Length = 213

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI  EGIEGAGK+T +  +++ LQ    +V VTREPGGT   E  R +LLS  ++
Sbjct: 1   MGRGRFIVLEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ E ++  AAR++HV+ VI PAL  GK +LCDRF  +SYAYQG         +  L
Sbjct: 61  GMSADTELLLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  ++  + PD  ++ D+PV +GL+R   R        LD FE++ +   ++ R I+L +
Sbjct: 121 ESWALNCLRPDLILLFDVPVRLGLQRATTRCQ-----QLDRFEQEKIDFFDRARTIYLSL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A+  PD+  ++DS+     V   I  ++   +++
Sbjct: 176 AKKYPDQYRLIDSSLPLTRVQEAIQKVIMAFLEE 209


>gi|326389200|ref|ZP_08210768.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994563|gb|EGD52987.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
          Length = 203

 Score =  256 bits (654), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT I  L+ +L ++ Y++ V REPGGT   E  R +LL    +  
Sbjct: 2   RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PAL +G+I++ DRF+DSSY YQG         +  + E
Sbjct: 61  SPVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   ++PD TI +D+  +  +KR   R         D  E++    H+K R+ ++ + +
Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLEKESWGFHKKVREGYIKLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R   +D       V  +I+++V + +
Sbjct: 174 EFPKRFVFIDGMQELMKVHQDIIDVVKKYL 203


>gi|329850687|ref|ZP_08265532.1| thymidylate kinase [Asticcacaulis biprosthecum C19]
 gi|328841002|gb|EGF90573.1| thymidylate kinase [Asticcacaulis biprosthecum C19]
          Length = 218

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 5/210 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G FI FEG EGAGK+T +  L + L+    +V  TREPGG+P AE  R++L+      
Sbjct: 7   STGRFIVFEGGEGAGKSTQVQALVKRLRDFGLEVVQTREPGGSPGAEVLRNLLVQGDAGR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   +E ++  AAR DH+E VIRPAL  G  ++CDRF DSS AYQG        F++ + 
Sbjct: 67  WSPMSETLMMYAARSDHLETVIRPALERGAWVVCDRFADSSRAYQGAGGGVAPEFIEQID 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V +  PD  ++LD+PV+ GL R   R         + FE K +  HE+ RQ FL+ A
Sbjct: 127 AAVVGDTQPDLVLVLDMPVEAGLARASARGDKE-----NRFESKGLAFHERLRQGFLNRA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              P+R  + ++    + +  +I  ++   
Sbjct: 182 AKVPERYRVFNADQPIEPLFNDIWRVMARA 211


>gi|317483375|ref|ZP_07942367.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690345|ref|YP_004219915.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|316915192|gb|EFV36622.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455201|dbj|BAJ65823.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 206

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
           SGLF+SFEG++G GKTT +  L  +L+ +   V VTREPGGT   +A R +LL     G 
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLHAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ          + S
Sbjct: 62  VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++PD T +LD+   +   R+++          D  E        + RQ FLD
Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +A  +P+R  ++D++ S ++V   I + + EL
Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205


>gi|163743050|ref|ZP_02150433.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10]
 gi|161383733|gb|EDQ08119.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10]
          Length = 229

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEGI+G+GK+T   LL   LQ +  +V +TREPGG+  AE  R ++L    D + 
Sbjct: 18  GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  +
Sbjct: 78  AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD TI++D+    GL R + R    E      FE   + + ++ R  FL +A  
Sbjct: 138 MIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             DR  ++D     + VA ++L +V   +
Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVVSTAL 220


>gi|116617408|ref|YP_817779.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|227431245|ref|ZP_03913299.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|122272391|sp|Q03ZG6|KTHY_LEUMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116096255|gb|ABJ61406.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|227353007|gb|EEJ43179.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 213

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 5/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   +FISFEG EGAGKT+ +  L   L+ +   D+  TREPGG P +EA R +L     
Sbjct: 1   MPKPIFISFEGPEGAGKTSVLEALISELKTKLGDDLVTTREPGGNPISEAIRSILQPEED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+   I+PAL + KI++ DR++DSS AYQG         +  
Sbjct: 61  NGMDKRTEALLYTAARRQHLVENIKPALDQNKIVISDRYVDSSLAYQGGGRGLGIDNIWE 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++  ++PD TI LD+PV+IGL RV           +D  +++ +  H+K R+ +L 
Sbjct: 121 INQFAIDGLLPDMTIYLDVPVEIGLARVNEN----RQGKIDRLDKESISFHQKVRETYLK 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +     DR  IVD+      V  +   ++ ++++ +
Sbjct: 177 LQSEFSDRIKIVDATQPLNKVIDDTRILINQILEDK 212


>gi|149376737|ref|ZP_01894495.1| thymidylate kinase [Marinobacter algicola DG893]
 gi|149358976|gb|EDM47442.1| thymidylate kinase [Marinobacter algicola DG893]
          Length = 210

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 6/213 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEG EG GK+T ++     L     +  VTREPGGTP AE+ R +LL+   + 
Sbjct: 3   RRGQFITFEGTEGVGKSTQLANAASTLDALGVECVVTREPGGTPMAESIRELLLAPRDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E ++  AAR  H+   I P L  G+ +LCDRF D+++AYQG         +  L+
Sbjct: 63  VNETTELLLMFAARAQHLHTRILPELEAGRWVLCDRFTDATFAYQGGGRGVPTERIALLE 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +    V PD  ++LD PV+ G+ R ++R        LD FE++ V   E+ R+ +L  A
Sbjct: 123 NLVQGTVRPDHVVLLDAPVETGMTRARHR------GELDRFEQEAVAFFERIRETYLARA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            N P R HIVD++   ++V+  +  ++  LV +
Sbjct: 177 ANAPGRYHIVDASQPIETVSAEVSGLLRNLVNR 209


>gi|467418|dbj|BAA05264.1| unknown [Bacillus subtilis]
          Length = 212

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + EA+++AAAR  H+   ++PAL +G I+LCDRF+DS  AYQG         + S+ E
Sbjct: 62  DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSPLAYQGYARGLGIDEVLSINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ ++MP  T+   +  + GLKR+    S  +    +  + + +  H K ++ + ++ +
Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H VD+  S   V  ++L ++ E ++K
Sbjct: 178 RFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209


>gi|149010423|ref|ZP_01831794.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75]
 gi|168485884|ref|ZP_02710392.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00]
 gi|182683879|ref|YP_001835626.1| thymidylate kinase [Streptococcus pneumoniae CGSP14]
 gi|303254972|ref|ZP_07341051.1| thymidylate kinase [Streptococcus pneumoniae BS455]
 gi|303259845|ref|ZP_07345820.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293]
 gi|303262259|ref|ZP_07348203.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292]
 gi|303264681|ref|ZP_07350599.1| thymidylate kinase [Streptococcus pneumoniae BS397]
 gi|303267182|ref|ZP_07353049.1| thymidylate kinase [Streptococcus pneumoniae BS457]
 gi|303269430|ref|ZP_07355199.1| thymidylate kinase [Streptococcus pneumoniae BS458]
 gi|238691153|sp|B2IP90|KTHY_STRPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147764904|gb|EDK71833.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75]
 gi|182629213|gb|ACB90161.1| thymidylate kinase [Streptococcus pneumoniae CGSP14]
 gi|183570969|gb|EDT91497.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00]
 gi|302598052|gb|EFL65119.1| thymidylate kinase [Streptococcus pneumoniae BS455]
 gi|302636582|gb|EFL67073.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292]
 gi|302639050|gb|EFL69510.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293]
 gi|302641049|gb|EFL71427.1| thymidylate kinase [Streptococcus pneumoniae BS458]
 gi|302643297|gb|EFL73577.1| thymidylate kinase [Streptococcus pneumoniae BS457]
 gi|302645768|gb|EFL75997.1| thymidylate kinase [Streptococcus pneumoniae BS397]
          Length = 212

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLELHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|225861172|ref|YP_002742681.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230558|ref|ZP_06964239.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254568|ref|ZP_06978154.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298503053|ref|YP_003724993.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A]
 gi|254808311|sp|C1CRV9|KTHY_STRZT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225727066|gb|ACO22917.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238648|gb|ADI69779.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A]
 gi|327389215|gb|EGE87560.1| thymidylate kinase [Streptococcus pneumoniae GA04375]
          Length = 212

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V     +++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKSVLFD 206


>gi|270291181|ref|ZP_06197404.1| thymidylate kinase [Pediococcus acidilactici 7_4]
 gi|270280577|gb|EFA26412.1| thymidylate kinase [Pediococcus acidilactici 7_4]
          Length = 210

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 72/214 (33%), Positives = 123/214 (57%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FISFEG +GAGKTT +  +    + +  D + VTREPGG P +EA R ++L    
Sbjct: 1   MVNGHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E  A  EA+++AAAR  H+   I PAL  G+++ CDR++DSS AYQG         +  
Sbjct: 61  TEMDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQ 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   + +  +P+ TI LD+  ++GLKR+        +  +D  + + +  HE+ R  +L 
Sbjct: 121 MNLFATEGCLPEKTIYLDVSAEVGLKRIM----THRTDDVDRLDLEQLDFHERVRDAYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+  P+R  ++D++ S   V   ++N++ ++++
Sbjct: 177 LAKRYPERIVVIDASQSIGDVKKAVINVLDQILK 210


>gi|261380492|ref|ZP_05985065.1| dTMP kinase [Neisseria subflava NJ9703]
 gi|284796744|gb|EFC52091.1| dTMP kinase [Neisseria subflava NJ9703]
          Length = 208

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 7/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+    + 
Sbjct: 2   KPRFITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+ 
Sbjct: 61  GLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               +  PD T++LD+P+++ + R+        +   D FE+++     + R+++L  A 
Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARINQ------TREKDRFEQEEAEFFNRVREVYLQRAN 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            QP+R  ++DS+ S  +V   I   +
Sbjct: 175 EQPERYAVIDSSQSLDAVKNQIETAL 200


>gi|225856597|ref|YP_002738108.1| thymidylate kinase [Streptococcus pneumoniae P1031]
 gi|254808310|sp|C1CK20|KTHY_STRZP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225725389|gb|ACO21241.1| thymidylate kinase [Streptococcus pneumoniae P1031]
 gi|301794077|emb|CBW36481.1| thymidylate kinase [Streptococcus pneumoniae INV104]
          Length = 212

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|312277894|gb|ADQ62551.1| Thymidylate kinase [Streptococcus thermophilus ND03]
          Length = 209

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKT+ + +L   L+      V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L  G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GL R+           ++  + + + +H++ RQ +LD
Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE----REVNRLDLEKIDMHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A  +P+R   +D++ + + V  +   I+   +
Sbjct: 177 LAEAEPERIKRIDASQTLEEVVEDTWEIIKSYL 209


>gi|199599031|ref|ZP_03212438.1| Thymidylate kinase [Lactobacillus rhamnosus HN001]
 gi|258509257|ref|YP_003172008.1| thymidylate kinase [Lactobacillus rhamnosus GG]
 gi|199590067|gb|EDY98166.1| Thymidylate kinase [Lactobacillus rhamnosus HN001]
 gi|257149184|emb|CAR88157.1| Thymidylate kinase [Lactobacillus rhamnosus GG]
 gi|259650539|dbj|BAI42701.1| thymidylate kinase [Lactobacillus rhamnosus GG]
          Length = 215

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 4/217 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ L   L+  +   VH+TREPGG   +E  R V+L      
Sbjct: 2   TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+PV +GL R+      R+    D  +++ +  HE+    ++ + 
Sbjct: 122 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQY---DRLDQESLAFHERVHAAYMKLV 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
            + P R   VD+     +V T     + E   +  + 
Sbjct: 179 ADNPKRIVTVDATQPLAAVVTAAFMTITERFPELFAK 215


>gi|226309662|ref|YP_002769556.1| thymidylate kinase [Brevibacillus brevis NBRC 100599]
 gi|226092610|dbj|BAH41052.1| thymidylate kinase [Brevibacillus brevis NBRC 100599]
          Length = 213

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 4/211 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG EGAGK+T I+ L   L+ +  DV +TREPGG   AE  R ++L+    +
Sbjct: 7   KKGRFITIEGGEGAGKSTVIAKLYEELKTRGVDVLLTREPGGIDIAEKIREIILNPAHTQ 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL EGK++LCDRF+DSS AYQG         +  + 
Sbjct: 67  MDERTEALLYAAARGQHLAEKVLPALAEGKLVLCDRFIDSSLAYQGHARGLGIDAVYQIN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +V + MP+ T+  D+  + GL R+           ++  + + +  HE  R+ +  + 
Sbjct: 127 RFAVGDCMPELTLFFDVQPETGLARINA----SRGREVNRLDLEGMRFHELVREGYQLVM 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R  ++D+    + V  + L  + + +
Sbjct: 183 ERDPERFVVIDAEQPMEQVYQSALQALLDRL 213


>gi|254503506|ref|ZP_05115657.1| thymidylate kinase [Labrenzia alexandrii DFL-11]
 gi|222439577|gb|EEE46256.1| thymidylate kinase [Labrenzia alexandrii DFL-11]
          Length = 224

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 92/222 (41%), Positives = 135/222 (60%), Gaps = 1/222 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEG EGAGK+T I+ LK FL+     V VTREPGG+P AE  R +LLS    + 
Sbjct: 2   QGHFISFEGGEGAGKSTQIARLKAFLESLGKTVIVTREPGGSPGAEKIRAMLLSGEARDL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+ +I+PAL  G  +LCDR+ DS+  YQGE       +L  L+ 
Sbjct: 62  GPRGEAMLFAAARADHVDTLIKPALDRGDWVLCDRYSDSTLVYQGEA-GVDLNYLRLLET 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +V  V P+ TI++D+P ++GL RVQ R     S   D FE + + +HE RR+ FLD+A 
Sbjct: 121 AAVAGVRPELTILIDVPAELGLARVQERAKTDTSGGPDRFEGEALRVHEGRRKRFLDLAA 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
            +  R  ++D +   ++V+ +I + V    Q +++  +  ++
Sbjct: 181 EEAYRFAVIDGSKDLEAVSASIQSAVEAAFQDQLTTDTPAQE 222


>gi|163814924|ref|ZP_02206312.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759]
 gi|158449863|gb|EDP26858.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759]
          Length = 207

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+ EG +GAGKTT   LLK +L++K YDV +TR+PGG P +EA R V+L+    E 
Sbjct: 2   RGIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKEFTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E +++A+AR   V+  I+PAL  G+ ++ DRF+DSS  YQG         +  + E
Sbjct: 62  GYMTELLLYASARAQLVKENIKPALEAGQAVIADRFVDSSAVYQGIGRGLGVDTVYKINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++Q +MPD T ++DL    G+ R +N       A LD  E + +  H+K    +  +A 
Sbjct: 122 FALQGIMPDMTFLMDLNAQEGIARKKN------QAELDRMENEKIEFHQKVVDGYRMLAD 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P+R   +D+      +   I   V + + 
Sbjct: 176 MHPERIVKIDATLPINEIHGIITKYVEKKLN 206


>gi|15900815|ref|NP_345419.1| thymidylate kinase [Streptococcus pneumoniae TIGR4]
 gi|111658126|ref|ZP_01408824.1| hypothetical protein SpneT_02000692 [Streptococcus pneumoniae
           TIGR4]
 gi|148984675|ref|ZP_01817943.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|148988371|ref|ZP_01819818.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|148996974|ref|ZP_01824628.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70]
 gi|149002482|ref|ZP_01827416.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|149006392|ref|ZP_01830104.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74]
 gi|149019523|ref|ZP_01834842.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72]
 gi|168575597|ref|ZP_02721533.1| thymidylate kinase [Streptococcus pneumoniae MLV-016]
 gi|194397492|ref|YP_002037572.1| thymidylate kinase [Streptococcus pneumoniae G54]
 gi|225854440|ref|YP_002735952.1| thymidylate kinase [Streptococcus pneumoniae JJA]
 gi|225858732|ref|YP_002740242.1| thymidylate kinase [Streptococcus pneumoniae 70585]
 gi|237651112|ref|ZP_04525364.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974]
 gi|237821889|ref|ZP_04597734.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974M2]
 gi|307067591|ref|YP_003876557.1| thymidylate kinase [Streptococcus pneumoniae AP200]
 gi|307127513|ref|YP_003879544.1| thymidylate kinase [Streptococcus pneumoniae 670-6B]
 gi|23821803|sp|Q97R91|KTHY_STRPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690815|sp|B5E437|KTHY_STRP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808306|sp|C1C6R6|KTHY_STRP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808309|sp|C1CDT1|KTHY_STRZJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|14972410|gb|AAK75059.1| thymidylate kinase [Streptococcus pneumoniae TIGR4]
 gi|147756674|gb|EDK63714.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70]
 gi|147759419|gb|EDK66411.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|147762169|gb|EDK69131.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74]
 gi|147923066|gb|EDK74181.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|147926052|gb|EDK77126.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|147930898|gb|EDK81878.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72]
 gi|183578645|gb|EDT99173.1| thymidylate kinase [Streptococcus pneumoniae MLV-016]
 gi|194357159|gb|ACF55607.1| thymidylate kinase [Streptococcus pneumoniae G54]
 gi|225720178|gb|ACO16032.1| thymidylate kinase [Streptococcus pneumoniae 70585]
 gi|225723023|gb|ACO18876.1| thymidylate kinase [Streptococcus pneumoniae JJA]
 gi|301799917|emb|CBW32496.1| thymidylate kinase [Streptococcus pneumoniae OXC141]
 gi|306409128|gb|ADM84555.1| Thymidylate kinase [Streptococcus pneumoniae AP200]
 gi|306484575|gb|ADM91444.1| thymidylate kinase [Streptococcus pneumoniae 670-6B]
 gi|332075547|gb|EGI86015.1| thymidylate kinase [Streptococcus pneumoniae GA17545]
 gi|332076213|gb|EGI86679.1| thymidylate kinase [Streptococcus pneumoniae GA41301]
          Length = 212

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|254469249|ref|ZP_05082654.1| thymidylate kinase [Pseudovibrio sp. JE062]
 gi|211961084|gb|EEA96279.1| thymidylate kinase [Pseudovibrio sp. JE062]
          Length = 227

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 88/222 (39%), Positives = 135/222 (60%), Gaps = 1/222 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FISFEG EGAGK+T I  L+  L  K  +   TREPGG+  AE  R VLLS    ++
Sbjct: 2   SGIFISFEGGEGAGKSTQIQRLRDKLAAKGIEAVTTREPGGSQGAELVREVLLSGAAKDY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AEA++FAAAR DH++ +I+PAL  GK +LCDRF DSS  YQGE        +++LQ+
Sbjct: 62  GVTAEAVLFAAARADHIDTLIKPALENGKWVLCDRFADSSRVYQGE-SGVPTPTVEALQQ 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++    P+ T+++++  ++GL RV  R +  E    D FE   +  H +R+++FL++AR
Sbjct: 121 VAIAGHNPNMTLLINVTPEVGLARVSKRTAPVEFDGPDRFETDTLETHRRRQELFLEMAR 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           N+PDR  ++D       V  +I   V +   +++   + + D
Sbjct: 181 NEPDRIVVIDGDQPQDKVTEDIWRAVQDRFAEQIQQETGEPD 222


>gi|229542305|ref|ZP_04431365.1| thymidylate kinase [Bacillus coagulans 36D1]
 gi|229326725|gb|EEN92400.1| thymidylate kinase [Bacillus coagulans 36D1]
          Length = 217

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+ EG EGAGKTT   ++   L+   Y V +TREPGG   AE  RH++L+    E 
Sbjct: 2   KGIFITAEGPEGAGKTTITGMIAAHLKENGYPVVLTREPGGIKIAEQIRHIILNPENTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA+R  H+   + PAL +G+I+LCDRF+DSS AYQG         +  + +
Sbjct: 62  DARTEALLYAASRRQHLAEKVLPALEQGRIVLCDRFIDSSLAYQGYARGIGIEEVYRINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T+  D+  + GL R+   ++      ++  + + +  H K R+ F  + +
Sbjct: 122 FATGGLLPDLTLYFDVEAETGLSRIAKNHN----REVNRLDLEAIDFHRKVREGFQILLK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P+R H +D+    + +    L  V + +
Sbjct: 178 RFPERIHAIDANKEVEYIYHTALQKVLDAI 207


>gi|322374522|ref|ZP_08049036.1| dTMP kinase [Streptococcus sp. C300]
 gi|321280022|gb|EFX57061.1| dTMP kinase [Streptococcus sp. C300]
          Length = 212

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALKAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDATKAVLFDRM 208


>gi|331266594|ref|YP_004326224.1| thymidylate kinase [Streptococcus oralis Uo5]
 gi|326683266|emb|CBZ00884.1| thymidylate kinase [Streptococcus oralis Uo5]
          Length = 212

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALGAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+    +      ++  + + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDTTKAVLFDRM 208


>gi|168494363|ref|ZP_02718506.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06]
 gi|221231705|ref|YP_002510857.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669]
 gi|254808307|sp|B8ZP37|KTHY_STRPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|183575667|gb|EDT96195.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06]
 gi|220674165|emb|CAR68688.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669]
          Length = 212

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILKEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|56961832|ref|YP_173554.1| thymidylate kinase [Bacillus clausii KSM-K16]
 gi|59798132|sp|Q5WLY2|KTHY_BACSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56908066|dbj|BAD62593.1| thymidylate kinase [Bacillus clausii KSM-K16]
          Length = 213

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG EGAGKTT I+L++  L  + Y+V  TREPGG   AE  R +LL     
Sbjct: 1   MKKGLFITVEGGEGAGKTTIINLVQEQLATQGYEVIRTREPGGVELAEQIRDLLLHTQGV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AAAR +H+   I PAL EG ++LCDR++DSS  YQG         + ++
Sbjct: 61  EMDNRTEALLYAAARREHLIKKIVPALAEGALVLCDRYIDSSLVYQGHARGIGMEEVRAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +++  MPD T+  D+  +IGL+RVQ           +  +++ +  H++ ++ +  +
Sbjct: 121 NGFAIETYMPDLTLYFDVEPEIGLERVQK----DAVRSWNRLDQETLTFHKRVQEGYKKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            + +P+R   +D+  SF  V  + +  +  ++
Sbjct: 177 LKAEPERIKAIDANRSFAEVFHDTMEEINRML 208


>gi|240141008|ref|YP_002965488.1| thymidylate kinase [Methylobacterium extorquens AM1]
 gi|240010985|gb|ACS42211.1| thymidylate kinase [Methylobacterium extorquens AM1]
          Length = 249

 Score =  255 bits (652), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 4/207 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      
Sbjct: 7   RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G  AEA++FAAAR+DH+ N+IRPAL  G I+LCDRF DS+ AYQG         +DSL+
Sbjct: 67  YGPFAEALMFAAARIDHIGNLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++++++ PD T+ILDLP + GL R + R +       D FE + +  HE+ R  F  IA
Sbjct: 127 RVTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIA 183

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P+RC ++D+     +V T I N +
Sbjct: 184 EAEPERCRVIDADLGPDAVETAIANAI 210


>gi|241759767|ref|ZP_04757867.1| dTMP kinase [Neisseria flavescens SK114]
 gi|241319775|gb|EER56171.1| dTMP kinase [Neisseria flavescens SK114]
          Length = 208

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 7/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+  V + 
Sbjct: 2   KPRFITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNP-VTQV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+ 
Sbjct: 61  SLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               +  PD T++LD+P+++ + R+        +   D FE+++     + R+++L  A 
Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARINQ------TREKDRFEQEEAEFFNRVREVYLQRAN 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            QP+R  ++DS+ S  +V   I   +
Sbjct: 175 EQPERYAVIDSSQSLDAVKNQIETAL 200


>gi|225848089|ref|YP_002728252.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643400|gb|ACN98450.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 204

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEGIEG+GK+T    L  +L       ++TREPGGT   +  R +LLS   + F 
Sbjct: 2   GVFITFEGIEGSGKSTQAKRLYEYLTNIGIKAYLTREPGGTSIGKKIREILLSHWEENFP 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           + AE +++ A R  HV N+I+P L +  I++ DRF DS+ AYQ       +  +D L ++
Sbjct: 62  SIAELLLYQADRNIHVNNIIKPLLQQDYIVISDRFYDSTTAYQHYARGIDYSIVDYLNKL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + P  T +LDLPV    KR+        +   D  E + +  H+K R+ FL IA  
Sbjct: 122 ATEGIKPHITFLLDLPVQEAFKRL--------NREKDRLESEGLNFHQKVREGFLKIADM 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
           + DR  ++D   S   +   ILNI+ E
Sbjct: 174 EKDRVIVLDGLKSPDEIFNQILNILKE 200


>gi|282898411|ref|ZP_06306402.1| Thymidylate kinase [Raphidiopsis brookii D9]
 gi|281196942|gb|EFA71847.1| Thymidylate kinase [Raphidiopsis brookii D9]
          Length = 216

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62
           G  I FEG+EG+GKTT + +L ++LQ       +TREPGGT   +  R +LL    ++  
Sbjct: 3   GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTDLGKNLRKLLLETSYEQPL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++ A R  HV ++I+P L  GK +LCDR+ +S+ AYQG         +D L +
Sbjct: 63  DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTIAYQGYGRGLNMTIIDQLNQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   +  D TI LD+ V+IGL R       R  A LD  E++ +  H + ++ + +IA+
Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQKGYNEIAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N P +   VD     + V  NI  I+
Sbjct: 177 NHPSKMIRVDGNGGQELVQENIRKIL 202


>gi|312109177|ref|YP_003987493.1| thymidylate kinase [Geobacillus sp. Y4.1MC1]
 gi|311214278|gb|ADP72882.1| thymidylate kinase [Geobacillus sp. Y4.1MC1]
          Length = 210

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 4/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F SFEG EGAGKTT I++L+ FL+ K +DV  TREPGG   AE  R ++L+    E 
Sbjct: 2   KGRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PA+  GKI+LCDRF+DSS AYQG         +  + +
Sbjct: 62  DGRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQGFARELGMDEILQINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++    P  TI  D+   +GL+R+Q      +   ++  + +++  H K R+ +L +A+
Sbjct: 122 FAIDGYFPTLTIYFDIDPKMGLERIQKN----KQREMNRLDMENLSFHYKVREGYLKLAK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              DR   +D++ S   V    +  + + + +R
Sbjct: 178 RFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210


>gi|256827903|ref|YP_003156631.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028]
 gi|256577079|gb|ACU88215.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028]
          Length = 211

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 1/207 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEG+EG GK+T    L     R+ +DV  T EPGG+   +  R +LL     +  +
Sbjct: 1   MFLTFEGMEGCGKSTQCKKLIEHFVRQGHDVLHTLEPGGSRLGKELRRILLDPKNSDLSS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E  ++ A R  HV +VIRPA+ +G+ ++CDRF DS+  YQG         L  L +++
Sbjct: 61  TSELFLYLADRAQHVSSVIRPAMEDGRTVICDRFADSTVVYQGYGRGLDPSLLHHLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           VQ + PD TI+LD+  +IGL+R   R         +  FE + +  H + R+ +L  A  
Sbjct: 121 VQGLWPDMTILLDVEPEIGLRRALTRNMQDNKTATEGRFEAESMAFHTRIREGYLTWAAL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
              R  +VD+  +  +V  +IL  + E
Sbjct: 181 HRGRFLVVDAGRNPDAVFDSILRGLEE 207


>gi|254388750|ref|ZP_05003983.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC
           27064]
 gi|197702470|gb|EDY48282.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC
           27064]
          Length = 747

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGK+T    L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 151 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 210

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV +V+RPAL  G +++ DR++DSS AYQG         +  +  
Sbjct: 211 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 270

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 271 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 322

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    ++V T + + + +++
Sbjct: 323 GDPARYLVVDAGQEPEAVTTVVRHRLDQML 352


>gi|315221919|ref|ZP_07863830.1| thymidylate kinase [Streptococcus anginosus F0211]
 gi|315188885|gb|EFU22589.1| thymidylate kinase [Streptococcus anginosus F0211]
          Length = 212

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FIS EG +GAGK++ +  L   L+ K      TREPGG   AE  R V+L     
Sbjct: 1   MAKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   I PAL  G+++L DRF+DSS AYQG     +   +D L
Sbjct: 61  EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+  + GL R+       +    D  +R+ V  H + R+ +L I
Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAK----SKERGADRLDRESVEWHRRVREGYLSI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +P+R   +D++   + V  + L ++ E V+
Sbjct: 177 LEKEPNRVRKIDASQPLEKVVADTLAVLAERVE 209


>gi|163853588|ref|YP_001641631.1| dTMP kinase [Methylobacterium extorquens PA1]
 gi|163665193|gb|ABY32560.1| dTMP kinase [Methylobacterium extorquens PA1]
          Length = 244

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 4/207 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      
Sbjct: 7   RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G  AEA++FAAAR+DH+EN+IRPAL  G I+LCDRF DS+ AYQG         +DSL+
Sbjct: 67  YGPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++++++ PD T+ILDLP + GL R + R +       D FE + +  HE+ R  F  IA
Sbjct: 127 RVTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIA 183

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +P+RC ++D+     +V T I   +
Sbjct: 184 EAEPERCRVIDADLGLDAVETAIAAAI 210


>gi|294496900|ref|YP_003560600.1| thymidylate kinase [Bacillus megaterium QM B1551]
 gi|294346837|gb|ADE67166.1| thymidylate kinase [Bacillus megaterium QM B1551]
          Length = 208

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 118/211 (55%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT I ++++ L ++ Y + +TREPGG   AE  R ++L+    E 
Sbjct: 2   SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYTIVLTREPGGIRIAEQIREIILNPSNTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + P L +G I+LCDRF+DSS AYQG         + ++ +
Sbjct: 62  DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++++ MP  T+  D+  ++GL+R+ N         ++  + + +  H K R  +L +  
Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERINN----GRKDEINRLDLESLDFHYKVRDGYLSLLS 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P+R   +D+  S + V       +  +++
Sbjct: 178 EFPERIRRIDANQSVEKVCEEAYKQIKLILK 208


>gi|270292959|ref|ZP_06199170.1| dTMP kinase [Streptococcus sp. M143]
 gi|270278938|gb|EFA24784.1| dTMP kinase [Streptococcus sp. M143]
          Length = 212

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDATKAVLFDRM 208


>gi|294056288|ref|YP_003549946.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221]
 gi|293615621|gb|ADE55776.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221]
          Length = 209

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 5/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62
           GLFISFEG EG GK+T I  L   L+ +  DV  TREPGGTP +EA R++L      +  
Sbjct: 3   GLFISFEGSEGCGKSTQIRALASRLEAEGIDVVRTREPGGTPLSEAIRNLLQHDEAGEGM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AEAE ++FAAAR      VI PA   GK +L DRF+DS+  YQG   +  H  + ++ +
Sbjct: 63  CAEAELLLFAAARAQLTREVIAPARRAGKAVLSDRFMDSTTVYQGVARALAHDDVAAINQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +V    PD TI++DL  ++GL+RV+ R        LD  ER+ +   +  RQ +L +A 
Sbjct: 123 FAVGTHKPDLTILIDLDPEVGLQRVKARS----GGQLDRMEREALDFFQAVRQGYLALAE 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  R  ++D  H+ +++   I N V + +
Sbjct: 179 QESKRFLVLDGNHTIEALEQEIWNAVRQRL 208


>gi|218294864|ref|ZP_03495718.1| dTMP kinase [Thermus aquaticus Y51MC23]
 gi|218244772|gb|EED11296.1| dTMP kinase [Thermus aquaticus Y51MC23]
          Length = 201

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 11/210 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG++G+GK+T   LL  FL+ +   V +TREPGG       R +LL+      
Sbjct: 2   AGLFLTLEGLDGSGKSTQAKLLAAFLEGRGLPVVLTREPGGGLPG--VRDLLLNPLKGPL 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++ +A R +HV  VI P+L  G  ++ DR+LDSS AYQG        +L  + +
Sbjct: 60  SPEAEYLLLSADRAEHVRKVILPSLEAGAWVVSDRYLDSSLAYQGFGRGLPLPWLLEVAK 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + P  T +LDLP +  L+RV++          D  ER+ +   ++ R+ +L +A+
Sbjct: 120 EATLGLTPRLTFLLDLPPEEALRRVKD---------PDRLEREGLAFFQRVREGYLFLAK 170

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P R  ++D+  S ++VA  I   +  L+
Sbjct: 171 EEPHRFVVLDATESVEAVAQRIQAHLLPLL 200


>gi|296111513|ref|YP_003621895.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154]
 gi|295833045|gb|ADG40926.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154]
          Length = 214

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 118/216 (54%), Gaps = 5/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ ++ L+  F Q    D+  TREPGG P +EA R +L     
Sbjct: 1   MTKPLFITFEGPEGAGKTSVLNQLVAEFQQTLGDDLISTREPGGNPISEAIRAILQPEED 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++ AAR  H+   + PAL  GK+++ DR++DSS AYQG         +  
Sbjct: 61  NGMDDRTEALLYTAARRQHLVETVLPALKAGKVVISDRYVDSSLAYQGGGRGLGVDHIWQ 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++  ++PD TI  DLP ++GL RV+          +D  +++ +  H+K R+ +L+
Sbjct: 121 INQFAIDGLLPDLTIYFDLPSELGLARVKAN----RQGKIDRLDKESLAFHQKVRKTYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +     DR  IVD+  S  +V      ++ E ++ R
Sbjct: 177 LQVKFSDRIKIVDATQSLDNVVDATRQLILERMKYR 212


>gi|225075646|ref|ZP_03718845.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens
           NRL30031/H210]
 gi|224953068|gb|EEG34277.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens
           NRL30031/H210]
          Length = 208

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+    + 
Sbjct: 2   KPRFITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+ 
Sbjct: 61  SLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               +  PD T++LD+P+++ + RV        +   D FE++      + R+++L  A 
Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARVNQ------TREKDRFEQEKAEFFNRVREVYLQRAN 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            QP+R  ++DS+ S  +V   I  ++
Sbjct: 175 EQPERYAVIDSSQSLDAVKNQIETVL 200


>gi|326795549|ref|YP_004313369.1| Thymidylate kinase [Marinomonas mediterranea MMB-1]
 gi|326546313|gb|ADZ91533.1| Thymidylate kinase [Marinomonas mediterranea MMB-1]
          Length = 208

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG EG+GK+T I+ L+++++ +     +TREPGGTP AE  R V+LS   +  
Sbjct: 2   KGKFITLEGGEGSGKSTAIACLEQWMKAQGIPYLLTREPGGTPLAEEIRQVVLSKRDETV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  E ++  AAR  HV   I PAL  G  ++ DRF+DSSY YQG         +DSL  
Sbjct: 62  NSITELLLVFAARAQHVAQKIAPALESGVWVISDRFIDSSYVYQGVARGLDIEDIDSLVR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V   +PD TI+LD+PV +G+ RV  R         D  + +    HE  R  FLD+A+
Sbjct: 122 LAVGASLPDKTILLDVPVSVGMARVSARTGN------DRLDGESTQFHEMVRAGFLDLAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               R  IVD++   ++V   I+ I+ ++ Q +
Sbjct: 176 RDSHRISIVDASVPQENVFEQIVTILEQVKQAK 208


>gi|168491022|ref|ZP_02715165.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04]
 gi|183574610|gb|EDT95138.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04]
          Length = 212

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|311070675|ref|YP_003975598.1| thymidylate kinase [Bacillus atrophaeus 1942]
 gi|310871192|gb|ADP34667.1| thymidylate kinase [Bacillus atrophaeus 1942]
          Length = 212

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 71/212 (33%), Positives = 121/212 (57%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K+ L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEIKKSLAARGLQVTATREPGGIDIAEQIREVILNEKNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  H+   ++PAL +G I+LCDRF+DSS AYQG         + S+ E
Sbjct: 62  DAKTEALLYAAARRQHLVEKVKPALEQGHIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ ++MP+ T+   +  + GL R+       +    +  + +++  H + R+ + ++ +
Sbjct: 122 FAIGDMMPNLTVYFSIKPEEGLSRIHANGLREK----NRLDLEELSFHTRVREGYHELMK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R   +D++ S + V  ++  ++ E ++K
Sbjct: 178 RFPKRFRTIDASQSKERVIEDVQIVINEALKK 209


>gi|325845428|ref|ZP_08168721.1| dTMP kinase [Turicibacter sp. HGF1]
 gi|325488534|gb|EGC90950.1| dTMP kinase [Turicibacter sp. HGF1]
          Length = 222

 Score =  254 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 4/214 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG FI+ EG EGAGKTT  + L + L     +   TREPGG   AE  R V+L     
Sbjct: 13  MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  +  EA+++AAAR  H+   ++PA+  GKI+LCDRF+DSS  YQG         +  +
Sbjct: 73  EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQGYARGIGMDEVREI 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +++  MPD TI  D+  + GL R+           ++  + + +  H+   + +   
Sbjct: 133 NQFAIEGFMPDMTIFFDIKPEDGLARIAANS----GREVNRLDLEGLEFHQLVYEGYKIQ 188

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A    +R   VD+  S ++V   I  ++ E + K
Sbjct: 189 ANLFSERIVTVDATQSIEAVTNEICQLILEKLGK 222


>gi|110003916|emb|CAK98256.1| thymidylate kinase protein [Spiroplasma citri]
          Length = 215

 Score =  254 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ EGI+G+GKTT   LLK  L+ + Y V +TREPGG   AE  R+V+LS        
Sbjct: 3   LFITLEGIDGSGKTTISKLLKEKLRSEGYQVVLTREPGGNEIAEQIRNVILSKHNLGMDP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++ AAR  HV   I PAL  G+I++CDRF+DS+ AYQG         LD +Q I 
Sbjct: 63  WTEALLYIAARRQHVVEDILPALKRGEIVICDRFMDSTSAYQGYARGLGIWTLDEVQSIV 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    PD T+  D+   +  +R++ R  +     ++  + +    H+K  + +  +    
Sbjct: 123 LGTTKPDLTLFFDIEPTMASERMKVRNEVE----MNRLDLEKNSFHKKVYEGYQVLISEN 178

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +R  ++D++     V   +   V E++QK
Sbjct: 179 AERIKVIDASKPVNEVLEQVYYYVDEIIQK 208


>gi|154684547|ref|YP_001419708.1| thymidylate kinase [Bacillus amyloliquefaciens FZB42]
 gi|166221718|sp|A7Z0F1|KTHY_BACA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|154350398|gb|ABS72477.1| Tmk [Bacillus amyloliquefaciens FZB42]
          Length = 212

 Score =  254 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLFI+FEG EGAGKTT +  +K  L  +   V  TREPGG   AE  R V+L+      
Sbjct: 2   SGLFITFEGPEGAGKTTVLQEMKEILSAEGLPVTATREPGGIDIAEQIREVILNKNNTLM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA+++AAAR  H+   ++PAL EG+I+LCDRF+DSS AYQG         + S+ +
Sbjct: 62  DAKTEALLYAAARRQHLAEKVQPALKEGRIVLCDRFIDSSLAYQGYARGLGIDEVLSINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ + MPD TI   +  + GLKR+ +     +S   +  + + +  H K R+ +  + +
Sbjct: 122 FAIGDTMPDVTIYFSIEPEEGLKRITSN----DSREKNRLDLEALHFHTKVREGYQKVMQ 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P+R H +D++   + V  + L ++ E ++K
Sbjct: 178 RFPERFHTIDASKKKELVIQDALQVINEALKK 209


>gi|302341674|ref|YP_003806203.1| thymidylate kinase [Desulfarculus baarsii DSM 2075]
 gi|301638287|gb|ADK83609.1| thymidylate kinase [Desulfarculus baarsii DSM 2075]
          Length = 226

 Score =  254 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 1/209 (0%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG EG GK+T  S+L R ++     V +TREPGG    +  R +LL  G +     
Sbjct: 13  FITLEGGEGCGKSTQASMLGRRIRGLGLKVVLTREPGGASLGQTIRELLLGPGQEPVDPV 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++F A R  HV   I PAL+ G++++CDRF DSS  YQG         +  L +   
Sbjct: 73  TELLLFLADRSHHVRAKIEPALLRGEVVVCDRFADSSEVYQGLARGLGLERVRRLNQWVC 132

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +  PD T++LDL   +GL R   R            E++ +  HE+ R+ FL  A+ +P
Sbjct: 133 GQCWPDLTLLLDLNPGLGLARAAQRQG-ELGQGPSPMEKEKLEFHERLREGFLAQAQAEP 191

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   VD+A   + VA  I   V  L+++
Sbjct: 192 GRIKPVDAARPAEEVAEAIWAHVEPLLRE 220


>gi|295702267|ref|YP_003595342.1| thymidylate kinase [Bacillus megaterium DSM 319]
 gi|294799926|gb|ADF36992.1| thymidylate kinase [Bacillus megaterium DSM 319]
          Length = 208

 Score =  254 bits (651), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT I ++++ L ++ Y++ +TREPGG   AE  R ++L+    E 
Sbjct: 2   SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYNIVLTREPGGIRIAEQIREIILNPSNTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + P L +G I+LCDRF+DSS AYQG         + ++ +
Sbjct: 62  DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++++ MP  T+  D+  ++GL+R+           ++  + + +  H K R  +L +  
Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERINK----GRKDEINRLDLESLDFHYKVRDGYLSLLS 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P+R   +D+  S + V       +  +++
Sbjct: 178 EFPERIRRIDANQSVEKVCEEAYKQIKLILK 208


>gi|169832724|ref|YP_001694387.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688287|sp|B1IBA2|KTHY_STRPI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|168995226|gb|ACA35838.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6]
          Length = 212

 Score =  254 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEVKGVKVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206


>gi|227545645|ref|ZP_03975694.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239622679|ref|ZP_04665710.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|312133481|ref|YP_004000820.1| tmk [Bifidobacterium longum subsp. longum BBMN68]
 gi|322688333|ref|YP_004208067.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F]
 gi|46576601|sp|Q8G6Z6|KTHY_BIFLO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|227213761|gb|EEI81600.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239514676|gb|EEQ54543.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|311772719|gb|ADQ02207.1| Tmk [Bifidobacterium longum subsp. longum BBMN68]
 gi|320459669|dbj|BAJ70289.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F]
          Length = 206

 Score =  254 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
           +GLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL     G 
Sbjct: 2   NGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ          + S
Sbjct: 62  VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++PD T +LD+   +   R+++          D  E        + RQ FLD
Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +A  +P+R  ++D++ S ++V   I + + EL
Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205


>gi|309775015|ref|ZP_07670030.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308917233|gb|EFP62958.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 210

 Score =  254 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 6/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLFI+FEG +G+GKTT   L    L+   Y V  TREPGG   AE  R V+L     
Sbjct: 1   MNKGLFITFEGNDGSGKTTISKLAYERLKEMGYPVIYTREPGGIDIAEQIRKVILDPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AA+R  H+   + PAL EG I+LCDRF+DSS  YQG         + ++
Sbjct: 61  AMDERCEALLYAASRRQHLVEKVLPALNEGSIVLCDRFVDSSLVYQGIARGIGMEEVYAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +++  +PD TI L +  + GL RV +R +       D  + + +  H+   Q +  I
Sbjct: 121 NQFAIEGHLPDATIFLSVDFETGLSRVTSRGNK------DRLDNESMEFHKLVAQGYELI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                DR HIVD+     +V  N ++ + E+++  V
Sbjct: 175 KEKFKDRMHIVDANADVDTVLNNTVSCIMEIIKNHV 210


>gi|15902879|ref|NP_358429.1| thymidylate kinase [Streptococcus pneumoniae R6]
 gi|116516561|ref|YP_816308.1| thymidylate kinase [Streptococcus pneumoniae D39]
 gi|46576561|sp|Q8DQ58|KTHY_STRR6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122278806|sp|Q04KZ0|KTHY_STRP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|15458437|gb|AAK99639.1| Thymidylate kinase [Streptococcus pneumoniae R6]
 gi|116077137|gb|ABJ54857.1| thymidylate kinase [Streptococcus pneumoniae D39]
          Length = 212

 Score =  254 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              + +R   +D++   + V      ++++
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTNAVLFD 206


>gi|314937925|ref|ZP_07845241.1| thymidylate kinase [Enterococcus faecium TX0133a04]
 gi|314941416|ref|ZP_07848309.1| thymidylate kinase [Enterococcus faecium TX0133C]
 gi|314948529|ref|ZP_07851909.1| thymidylate kinase [Enterococcus faecium TX0082]
 gi|314951284|ref|ZP_07854338.1| thymidylate kinase [Enterococcus faecium TX0133A]
 gi|314992885|ref|ZP_07858286.1| thymidylate kinase [Enterococcus faecium TX0133B]
 gi|314998089|ref|ZP_07862977.1| thymidylate kinase [Enterococcus faecium TX0133a01]
 gi|313587931|gb|EFR66776.1| thymidylate kinase [Enterococcus faecium TX0133a01]
 gi|313592689|gb|EFR71534.1| thymidylate kinase [Enterococcus faecium TX0133B]
 gi|313596501|gb|EFR75346.1| thymidylate kinase [Enterococcus faecium TX0133A]
 gi|313599839|gb|EFR78682.1| thymidylate kinase [Enterococcus faecium TX0133C]
 gi|313642783|gb|EFS07363.1| thymidylate kinase [Enterococcus faecium TX0133a04]
 gi|313645026|gb|EFS09606.1| thymidylate kinase [Enterococcus faecium TX0082]
          Length = 231

 Score =  254 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 19  NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 78

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 79  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 138

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R++          +D  + + +  H++ R  +L +A
Sbjct: 139 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 194

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P+R H VD+  SF+ V     + + E
Sbjct: 195 EENPERIHKVDARKSFEEVLQTSYHTIIE 223


>gi|291517602|emb|CBK71218.1| thymidylate kinase [Bifidobacterium longum subsp. longum F8]
          Length = 206

 Score =  254 bits (651), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL     G 
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ          + S
Sbjct: 62  VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++PD T +LD+   +   R+++          D  E        + RQ FLD
Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +A  +P+R  ++D++ S ++V   I + + EL
Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205


>gi|306829296|ref|ZP_07462486.1| thymidylate kinase [Streptococcus mitis ATCC 6249]
 gi|304428382|gb|EFM31472.1| thymidylate kinase [Streptococcus mitis ATCC 6249]
          Length = 212

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFDRM 208


>gi|253576904|ref|ZP_04854229.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843771|gb|EES71794.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 216

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 7/217 (3%)

Query: 1   MN---SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN    GLFI+ EG +G+GKTT +  ++R L+ +  +   TREPGG   AE  R V+L+ 
Sbjct: 1   MNHQAKGLFITLEGGDGSGKTTVMREMERLLKEQGVNFISTREPGGIEIAEKIREVILNP 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                 A  EA+++AA+R  H+   + P+L  G  +LCDRFLDSS AYQG         +
Sbjct: 61  QHTAMDARTEALLYAASRRQHLAEKVEPSLERGITVLCDRFLDSSLAYQGYARGLGIDEV 120

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +   + +   PD T  LD+  ++GL R+           ++  + + +  H+K R+ +
Sbjct: 121 LKINLFATKGRFPDLTFYLDIEPEVGLARIAA----GAGREVNRLDMESLHFHQKVREGY 176

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +A   P+R   +D++ S + VA  I   ++  +++
Sbjct: 177 QILAGMYPERIKTIDASRSKEEVAAEIRGHLYVAIKE 213


>gi|15805151|ref|NP_293837.1| thymidylate kinase [Deinococcus radiodurans R1]
 gi|14285522|sp|Q9RY40|KTHY_DEIRA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|6457772|gb|AAF09698.1|AE001873_8 thymidylate kinase [Deinococcus radiodurans R1]
          Length = 206

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG EGAGKTT ++ L+  L+   + V VTREPGGTP     R V+L   V+
Sbjct: 1   MSQGLFITLEGPEGAGKTTQLARLEARLRAAGHAVTVTREPGGTPLGTRVREVVLDPAVE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++++A+R   V  V+RPAL  G+ +LCDR+ DSS AYQG         L  +
Sbjct: 61  -IEPLGEFLLYSASRAQLVREVLRPALERGETVLCDRYADSSLAYQGAGRGLSLPLLRQI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + P  T++LDL   +GL+R   R         D  E+ D+  H + RQ FLD+
Sbjct: 120 TAEVTGGLTPGLTVLLDLDPALGLQRAARR------GQPDRLEQADLTFHRRVRQGFLDL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A  +P R  ++D+      +   I   V E
Sbjct: 174 AHAEPQRFLVLDATRPEDELEAEIWAAVSE 203


>gi|53803739|ref|YP_114428.1| thymidylate kinase [Methylococcus capsulatus str. Bath]
 gi|59798160|sp|Q606M0|KTHY_METCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53757500|gb|AAU91791.1| thymidylate kinase [Methylococcus capsulatus str. Bath]
          Length = 208

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T++  +   L+ +   V  TREPGGT   EA R + L    D
Sbjct: 1   MTPGKFITLEGGEGVGKSTNVDFVVSRLRARGLKVVATREPGGTAFGEAVREIFL--RQD 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EAE ++  AAR+ H+  VI PAL  G  ++CDRF D+SYAYQG         +D L
Sbjct: 59  TVRPEAELLLLFAARVHHLREVIEPALRRGDWVVCDRFTDASYAYQGAGRGIAPGVIDFL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++LD PVD GLKR   R      +  D  ER+D     + R+ +L +
Sbjct: 119 RDWIQAGLRPDLTLLLDAPVDTGLKRAHQR------SGPDRLEREDSAFFARVREGYLAL 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           AR +P R  ++D+      V T I   V  L+   V
Sbjct: 173 ARAEPGRIRVIDADRPLALVQTAIATQVDSLLAGHV 208


>gi|319638548|ref|ZP_07993310.1| thymidylate kinase [Neisseria mucosa C102]
 gi|317400297|gb|EFV80956.1| thymidylate kinase [Neisseria mucosa C102]
          Length = 208

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 7/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+ +GI+GAGK+T+++++K + ++    V  TREPGGTPA EA R +LL+    + 
Sbjct: 2   KPRFITLDGIDGAGKSTNLAVMKAWFEKHKLPVLFTREPGGTPAGEALREILLNPAT-QV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  H+E VI PAL  G  ++ DRF D+++AYQG         + +L+ 
Sbjct: 61  SLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               +  PD T++LD+P+++ + R+        +   D FE++      + R+++L  A 
Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARINQ------TREKDRFEQEAAEFFNRVREVYLQRAA 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            QP+R  ++DS  S  +V T I   +
Sbjct: 175 KQPERYAVIDSGQSLDAVKTQIETAL 200


>gi|301300450|ref|ZP_07206650.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851947|gb|EFK79631.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 208

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 5/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEGI+G+GKT+ +  +   L  K  D    TREPGG   +EA R ++L+    E 
Sbjct: 3   GKFITFEGIDGSGKTSVLKGVIEHLNGKKIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+ + + PAL EGK++LCDRF+DSS  YQG         +  L E
Sbjct: 63  DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVIKLNE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + PD T+  D+  +I LKR+ N         +D  +++ +  + K RQ +L +A 
Sbjct: 123 FATENLKPDLTLYYDVEPEISLKRISNN----RQNQVDRLDKESMDFYHKVRQAYLSLAE 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  +R  ++D++ +   V  + L+I+   +
Sbjct: 179 SNKERIKVIDASQNLDKVIDDTLSILNNFM 208


>gi|320095385|ref|ZP_08027065.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977690|gb|EFW09353.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 256

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 9/208 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+FEG++GAGKTT I  ++ + + + ++V +T EPGGTP     R ++ + G D+ 
Sbjct: 12  RGVFITFEGVDGAGKTTQIRNVREWFEERGFEVVMTCEPGGTPLGAELRRLVQN-GPDDI 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV  V+RPAL  G ++L DR++DSS AYQG   S     + ++  
Sbjct: 71  DPRTEALLYAADRAYHVATVVRPALARGAVVLGDRYIDSSLAYQGAARSLGVDEIAAMSA 130

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + P  T +LDLP ++G  R         +   D  ER+    HE+ R+ +L +A 
Sbjct: 131 WATEGLSPRTTFLLDLPPEVGAGR--------RTDAPDRMERESADFHERVRREYLRLAD 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +PDR  ++D+  + + V + I  ++ E
Sbjct: 183 AEPDRIVVIDAVGTREEVFSEIRGVLVE 210


>gi|284989206|ref|YP_003407760.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
 gi|284062451|gb|ADB73389.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
          Length = 225

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+FEG EGAGK+T + LL  +L  +      T EPGGTPA  A R ++L       
Sbjct: 18  RGLFIAFEGGEGAGKSTQVRLLCEWLTAQGRPARATFEPGGTPAGAAVRAIVLDRAHTGL 77

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R  H   V+RPAL  G++++ DR++DSS AYQG   +     + ++  
Sbjct: 78  SPRAEALLYAADRAQHAHAVLRPALEAGEVVVTDRYVDSSLAYQGAGRTIGLDDVAAISR 137

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T++LDLP + GL         R  A  D  E + +  H++ R  F  +A 
Sbjct: 138 WATLGLRPDLTVLLDLPPETGL------ARARGRAAADRLESESLEFHQRVRDTFRTLAA 191

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P R  ++D+      +A ++   V  L+ +R
Sbjct: 192 AEPGRYLVLDATRGVDELAADVRARVGALLGER 224


>gi|81298904|ref|YP_399112.1| thymidylate kinase [Synechococcus elongatus PCC 7942]
 gi|81167785|gb|ABB56125.1| thymidylate kinase [Synechococcus elongatus PCC 7942]
          Length = 215

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 13/217 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLL 55
           MN G FI  EGI+G GK+T +  L  +L      +    +  TREPG T   +A R +LL
Sbjct: 1   MNFGNFIVLEGIDGCGKSTQLQRLVNWLPHSSLLQPGQVIVATREPGDTALGQALRSLLL 60

Query: 56  --SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                       AE +++AA R  HVE V+RP L  G +++CDR++DS+ AYQG      
Sbjct: 61  TQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAVVVCDRYVDSTVAYQGYGRGLD 120

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              +  L  ++   +  D T+ LDLPV I  +R Q R         D  E   +   E+ 
Sbjct: 121 QSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQAR------GQGDRMEAAGLAFQERL 174

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           RQ F  IA  +PDR   +D+A     VA  I  +V +
Sbjct: 175 RQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVVQQ 211


>gi|158339115|ref|YP_001520292.1| thymidylate kinase [Acaryochloris marina MBIC11017]
 gi|189028825|sp|B0C3N6|KTHY_ACAM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|158309356|gb|ABW30973.1| thymidylate kinase [Acaryochloris marina MBIC11017]
          Length = 231

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 77/227 (33%), Positives = 115/227 (50%), Gaps = 17/227 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-------------VHVTREPGGTPAAEAA 50
           G FI FEG EGAGKTT ++L+  +L    +              V  TREPGGT   ++ 
Sbjct: 3   GKFIVFEGGEGAGKTTQLNLVFEWLTGSGWTNRIKGYIQGDYPSVLTTREPGGTALGKSI 62

Query: 51  RHVLLSC---GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
           R +LL     G +     AE ++FAA R  HV + + P L +G ++LCDR+ DS+ AYQG
Sbjct: 63  RKLLLDVTATGNESIDERAELLLFAADRAQHVSSCLLPHLQQGALVLCDRYTDSTIAYQG 122

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                    +  L +I+ Q ++ D T  LD+  + GL R  +R    E    D  E  ++
Sbjct: 123 YGRELDLTLIHQLNQIATQGLVSDLTFWLDIDPEFGLARTHDREQDPEIET-DRMEANEI 181

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             H++ RQ F D+AR  P+R   +++  S   VA  I  I+   +Q+
Sbjct: 182 AFHQRLRQGFADLARQHPERIFRIEAHQSDDVVAQQIQGILESRLQE 228


>gi|121602268|ref|YP_989111.1| thymidylate kinase [Bartonella bacilliformis KC583]
 gi|120614445|gb|ABM45046.1| thymidylate kinase [Bartonella bacilliformis KC583]
          Length = 213

 Score =  254 bits (650), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 93/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG GKTT ISLL  + + K Y+V +TREPGGT  AE  R++LLS    ++G
Sbjct: 2   GYFITFEGGEGVGKTTQISLLAHYFRSKGYEVVITREPGGTAGAEIIRYILLSGSAIQYG 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  EA++F AAR DHV  VI+PAL  GKI+LCDRF+DS+  YQG  +      L  L+ I
Sbjct: 62  SFIEAVLFTAARADHVAEVIKPALQAGKIVLCDRFIDSTRVYQGLNNKVDSYLLSILECI 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  VMP+ T +LD+P    ++RV+ R   +ES  +D+FE+ ++ I E+RRQ FL +A+N
Sbjct: 122 GINGVMPNLTFLLDVPAISSMERVKLR--RKESGIIDHFEKDELKIQEQRRQAFLQLAKN 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P+R  ++D+  + + +A  I +I  +++
Sbjct: 180 EPNRIQVIDATGTVEEIACQIKDICHQVI 208


>gi|309805418|ref|ZP_07699465.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c]
 gi|312872145|ref|ZP_07732218.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|329921009|ref|ZP_08277537.1| dTMP kinase [Lactobacillus iners SPIN 1401G]
 gi|308165236|gb|EFO67472.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c]
 gi|311092229|gb|EFQ50600.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|328935285|gb|EGG31765.1| dTMP kinase [Lactobacillus iners SPIN 1401G]
          Length = 229

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E
Sbjct: 18  KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 77

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG         +  + 
Sbjct: 78  MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 137

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  + 
Sbjct: 138 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 193

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R   VD+  S   V +  + I+ E +
Sbjct: 194 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 224


>gi|229552948|ref|ZP_04441673.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1]
 gi|229313692|gb|EEN79665.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1]
          Length = 226

 Score =  254 bits (650), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 4/217 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ L   L+  +   VH+TREPGG   +E  R V+L      
Sbjct: 13  TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISEMIRDVILDPKNTA 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 73  MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+PV +GL R+      R+    D  +++ +  HE+    ++ + 
Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQY---DRLDQESLAFHERVHAAYMKLV 189

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
            + P R   VD+     +V T     + E   +  + 
Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITERFPELFAK 226


>gi|251781863|ref|YP_002996165.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242390492|dbj|BAH80951.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 211

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  +   L+ + + ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + PD T+  D+P +IGL R+       ++  ++  + + V +H++ R+ +L 
Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAAN----KNREVNRLDLEAVDMHQRVREGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+ QP+R   +D++   + V    L  +  L++
Sbjct: 177 LAQEQPNRIVTIDASKPLEDVVDVALAHILALME 210


>gi|160914736|ref|ZP_02076950.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991]
 gi|158433276|gb|EDP11565.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991]
          Length = 210

 Score =  254 bits (649), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+FEG +G+GKTT   L    L+   Y V  TREPGG   AE  RH++L     
Sbjct: 1   MKKGLFITFEGNDGSGKTTISMLAYESLKAAGYPVIYTREPGGIDIAEQIRHIILDPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AA+R  H+   + PAL + +I+LCDRFLDSS AYQG         +  +
Sbjct: 61  AMDGRCEALLYAASRRQHLVEKVLPALEKKQIVLCDRFLDSSLAYQGVARGIGVDEVYGI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++  MPD TI LD+ +++GL RV +R +      LD  +++ +  H+   + +  +
Sbjct: 121 NEFAIEGCMPDATIYLDVSLEVGLARVASRGN------LDRMDQESMDFHQAVAKGYAIV 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                 R HIV++    + V  + L ++ E+VQ
Sbjct: 175 REKFAKRMHIVNADQEVEKVLADTLKVLEEIVQ 207


>gi|328478590|gb|EGF48257.1| thymidylate kinase [Lactobacillus rhamnosus MTCC 5462]
          Length = 226

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 4/217 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ L   L+  +   VH+TREPGG   +E  R V+L      
Sbjct: 13  TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 73  MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+PV +GL R+      R+    D  +++ +  HE+    ++ + 
Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQY---DRLDQESLAFHERVHAAYMKLV 189

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
            + P R   VD+     +V T     + E   +  + 
Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITERFPELFAK 226


>gi|224824708|ref|ZP_03697815.1| dTMP kinase [Lutiella nitroferrum 2002]
 gi|224603201|gb|EEG09377.1| dTMP kinase [Lutiella nitroferrum 2002]
          Length = 208

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 7/215 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG++GAGK+T ++ ++ +L  +  D   TREPGGT   E  R +LL+   +
Sbjct: 1   MRRGTFITLEGVDGAGKSTQLAAVRDWLAEQGIDAVFTREPGGTVLGEKLRELLLAVDTE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E E ++  AAR +H+  VI PAL  G+ ++ DRF D+++AYQG         +++L
Sbjct: 61  -VTLETETLLMFAARQEHIARVIEPALAAGRWVVSDRFTDATFAYQGGGRGLPFARIEAL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++   Q + PD T++ D+P+D+  +R+           LD FE++    H + R  +L  
Sbjct: 120 EDWVQQGLQPDLTLLFDVPLDVAARRMAG-----GERVLDRFEQEAADFHARVRAAYLQR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A   P R  +VD+  S + V   ++  +  + ++R
Sbjct: 175 ASANP-RIAVVDANRSPEQVRAEVMRRLDAVRERR 208


>gi|251794049|ref|YP_003008780.1| thymidylate kinase [Paenibacillus sp. JDR-2]
 gi|247541675|gb|ACS98693.1| thymidylate kinase [Paenibacillus sp. JDR-2]
          Length = 217

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G+FI+ EG EGAGKTT I  L   +Q++   V  TREPGG P AE  R V+L     
Sbjct: 1   MNKGIFITIEGGEGAGKTTLIEQLAHTMQQRGKTVITTREPGGIPIAEQIRSVILDRNHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA+++AA+R  H+   + PAL +G+I++CDRF+DSS AYQG         + S+
Sbjct: 61  GMDARTEALLYAASRRQHLVEKVMPALADGQIVICDRFVDSSLAYQGHARGLGMEEVWSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V   MP  TI +D+  ++GL R++          ++  + + +  H+  R+ +  +
Sbjct: 121 NRFAVDGAMPQLTIYMDIDPEVGLARIRAAGE----REVNRLDLESLAFHQLVREGYQKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
               P+R   +D+ ++  +V   ++  +
Sbjct: 177 LEQFPERIVQIDAGNAANAVLEEVILTI 204


>gi|302388610|ref|YP_003824431.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
 gi|302199238|gb|ADL06808.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646]
          Length = 211

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 106/211 (50%), Gaps = 8/211 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+ EG +GAGKTT    + ++L+ K   V  TREPGGT   E  R VLL     
Sbjct: 5   LRKGKFITIEGPDGAGKTTQAEKIVQYLKSKGKRVISTREPGGTALGEQLRKVLLDPEGS 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA R   +E ++ PAL EG  ++CDRF+DSS AYQG         +  L
Sbjct: 65  PVS-NAEALIYAACRAQLLERMVIPALREGFTVVCDRFVDSSLAYQGWARGIGINRILQL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD TI+LD+   + L R+            D  E + +  H+K R+ ++ +
Sbjct: 124 NKWVIGSYWPDITILLDVDPAVSLGRL-------VGGRKDRLESEALEFHQKVREGYMKV 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               PDR  I+D++     V   I+  + + 
Sbjct: 177 REMFPDRIRIIDASQPADEVFRQIVAELEKA 207


>gi|259501361|ref|ZP_05744263.1| dTMP kinase [Lactobacillus iners DSM 13335]
 gi|315653112|ref|ZP_07906037.1| thymidylate kinase [Lactobacillus iners ATCC 55195]
 gi|259167214|gb|EEW51709.1| dTMP kinase [Lactobacillus iners DSM 13335]
 gi|315489477|gb|EFU79114.1| thymidylate kinase [Lactobacillus iners ATCC 55195]
          Length = 234

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E
Sbjct: 23  KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 82

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG         +  + 
Sbjct: 83  MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 142

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  + 
Sbjct: 143 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 198

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R   VD+  S   V +  + I+ E +
Sbjct: 199 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 229


>gi|282889968|ref|ZP_06298503.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500161|gb|EFB42445.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 222

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 111/209 (53%), Gaps = 2/209 (0%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
           FI+FEG EGAGKTT I  ++  L++  YDV  TREPGG+      R  LL          
Sbjct: 12  FITFEGGEGAGKTTLIQQVEADLKQLGYDVVSTREPGGSSLGNTIRQWLLQQNTKTSISI 71

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F AAR  H+E +I P+L +GKI+LCDRF DS+ AYQG         + +L +  
Sbjct: 72  KAELLLFLAARAQHIEELILPSLTKGKIVLCDRFNDSTIAYQGVARGLGLEAVQNLCKFV 131

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQIFLDIARN 183
              V+PD TI LD+   +GL R ++          +D  E + +  HE  RQ F  +   
Sbjct: 132 CGNVVPDLTIYLDIDPHVGLTRTRHAAKEDAPMGSIDRIESEKLEFHEHVRQGFFKLIHQ 191

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P R H++D++ S + V  +    +  L+
Sbjct: 192 NPSRYHVIDASMSPELVLRDARATIDRLL 220


>gi|254563522|ref|YP_003070617.1| thymidylate kinase [Methylobacterium extorquens DM4]
 gi|254270800|emb|CAX26805.1| thymidylate kinase [Methylobacterium extorquens DM4]
          Length = 244

 Score =  254 bits (649), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 90/199 (45%), Positives = 125/199 (62%), Gaps = 4/199 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      
Sbjct: 7   RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G  AEA++FAAAR+DH+EN+IRPAL  G I+LCDRF DS+ AYQG         +DSL+
Sbjct: 67  YGPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++++++ PD T+ILDLP + GL R + R +       D FE + +  HE+ R  F  IA
Sbjct: 127 RVTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRAAFRSIA 183

Query: 182 RNQPDRCHIVDSAHSFQSV 200
             +P+RC ++D+     +V
Sbjct: 184 EAEPERCRVIDADLGPDAV 202


>gi|87122703|ref|ZP_01078578.1| Thymidylate kinase [Marinomonas sp. MED121]
 gi|86162000|gb|EAQ63290.1| Thymidylate kinase [Marinomonas sp. MED121]
          Length = 208

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 7/211 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG+GK+T I  +K +L+ +N +  +TREPGGTP AE  R+++LS   +
Sbjct: 1   MIKGKFITLEGGEGSGKSTCIKYIKAWLESQNIEYIITREPGGTPLAEEIRNMILSHREE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E E ++  AAR  H++  I+PA+  GK ++ DRF+DSSY YQG         +D L
Sbjct: 61  KIHDETELLLMFAARTQHIKEKIKPAIDAGKWVISDRFVDSSYVYQGAARGGDLKKIDQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E  +Q   PD T++ D+PVDIGL RV+ R         D  + + V+ H+  R  FL  
Sbjct: 121 AEWVLQGCKPDKTLLFDVPVDIGLSRVEKRAQS------DRLDDEPVVFHQMVRDAFLAR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                +   ++D++   ++V   +   + +L
Sbjct: 175 -EKTSNHYCLIDASQPIENVNLAVKQELEKL 204


>gi|163738563|ref|ZP_02145977.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107]
 gi|161387891|gb|EDQ12246.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107]
          Length = 229

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEGI+G+GK+T   LL   LQ +  +V +TREPGG+  AE  R ++L    D + 
Sbjct: 18  GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  +
Sbjct: 78  AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD TI++D+    GL R + R    E      FE   + + ++ R  FL +A  
Sbjct: 138 MIGH-EPDLTILIDMNPSKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             DR  ++D     + VA ++L +V   +
Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVVSTAL 220


>gi|222152616|ref|YP_002561791.1| thymidylate kinase [Streptococcus uberis 0140J]
 gi|254808308|sp|B9DTV7|KTHY_STRU0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|222113427|emb|CAR41106.1| thymidylate kinase [Streptococcus uberis 0140J]
          Length = 211

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 5/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+ EG +GAGKT+ +  L   L++ N   +  TREPGG   +E+ R+++L    
Sbjct: 1   MTKGKIITLEGPDGAGKTSVLEQLVLKLEKDNEQSIVTTREPGGVAISESIRNIILDVNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E   + E +++ AAR  H+   + P+L  GK++  DRF+DSS AYQGE        ++ 
Sbjct: 61  TEMDFKTELLLYIAARRQHLVEKVLPSLSAGKLVFIDRFIDSSVAYQGEGRGLNKSDIEW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +   + PD T++ D+P +IG+ R+    +      ++  + + + +H+K RQ +L+
Sbjct: 121 LNDFATDGIKPDLTLLFDVPSEIGIARINQNVN----REINRLDLEKLEMHQKVRQGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +A+  PDR  ++D++     V      ++ E
Sbjct: 177 LAKANPDRIVLIDASKPLDDVVDEAYRVIKE 207


>gi|46576522|sp|Q83E35|KTHY_COXBU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 227

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 8/221 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGIEG GKTT ++ ++  L        VTREPGGTP AEA R VLLS   +  
Sbjct: 9   RGRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMM 68

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L  
Sbjct: 69  CPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAG 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +A 
Sbjct: 129 WVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALAN 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
            +P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 183 QEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 221


>gi|322411208|gb|EFY02116.1| thymidylate kinase [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 211

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  +   L+ + + ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + PD T+  D+P +IGL R+       ++  ++  + + V +H++ R+ +L 
Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAAN----KNREVNRLDLEAVDMHQRVREGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+ QP+R   +D++   + V    L  +  L++
Sbjct: 177 LAQEQPNRIVTIDASKPLEDVVGVALAHILALME 210


>gi|293374639|ref|ZP_06620954.1| dTMP kinase [Turicibacter sanguinis PC909]
 gi|292646729|gb|EFF64724.1| dTMP kinase [Turicibacter sanguinis PC909]
          Length = 222

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 4/214 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG FI+ EG EGAGKTT  + L + L     +   TREPGG   AE  R V+L     
Sbjct: 13  MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  +  EA+++AAAR  H+   ++PA+  GKI+LCDRF+DSS  YQG         +  +
Sbjct: 73  EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQGYARGIGMDEVREI 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +++  MPD TI  D+  + GL R+           ++  + + +  H+   + +   
Sbjct: 133 NQFAIEGFMPDMTIFFDIKPEDGLARIAANS----GREVNRLDLEGLEFHQLVYEGYKIQ 188

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A    +R   VD+  S Q+V   I  ++ E + K
Sbjct: 189 ANLFSERIVTVDATQSIQAVTNEICQLILEKLGK 222


>gi|320010005|gb|ADW04855.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331]
          Length = 1036

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F+  EG +GAGK+T +  +  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 506 NGFFLVLEGGDGAGKSTQVEAIAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+      +R         +   D  E +    H++ R  FL +A 
Sbjct: 626 WATSGLVPHLTVLLDVDPQTARERF--------TEAPDRLESEPAEFHDRVRSGFLTLAA 677

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+    +++ T + + +  L+
Sbjct: 678 ADPARYLVVDAGQEAEAITTVVRHRLDRLL 707


>gi|319407218|emb|CBI80857.1| Thymidylate kinase [Bartonella sp. 1-1C]
          Length = 213

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 96/210 (45%), Positives = 137/210 (65%), Gaps = 2/210 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT  AEA R++LLS  V ++
Sbjct: 2   SGYFITFEGGEGVGKTTQISLLSQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E  +F AAR DHV  +I P+L  GKI+LCDRF+DS+  YQG  +         L+ 
Sbjct: 62  GPFIETFLFTAARADHVSEIIIPSLQAGKIVLCDRFIDSTRVYQGINNKVDAHIFSILEH 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I ++ + PD T +LD+P  +G++RV  R    E   +DYFE+ D+ I E+RRQ FL++A+
Sbjct: 122 IGMKGIKPDLTFLLDIPTKLGIERVNLRRKRIEK--IDYFEKDDLAIQEQRRQAFLELAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++P R  ++D   + + +A  I +I  +L+
Sbjct: 180 HEPHRFQVIDGTCAVEVIADQIKDICHQLL 209


>gi|70729185|ref|YP_258921.1| thymidylate kinase [Pseudomonas fluorescens Pf-5]
 gi|123656957|sp|Q4KFR2|KTHY_PSEF5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|68343484|gb|AAY91090.1| thymidylate kinase [Pseudomonas fluorescens Pf-5]
          Length = 210

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+    +V +TREPGGTP AE  R VLL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVLLTREPGGTPLAERIRDVLLTPVEEVM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G ++LCDRF DS+YAYQG         + +L++
Sbjct: 62  NADTELLLVFAARAQHLATVIRPALERGAVVLCDRFTDSTYAYQGAGRGLSLARIAALED 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               E+ PD T++ DLPVD+GL R   R        LD FE++     +K R+ FL  A 
Sbjct: 122 FVQGELRPDLTLVFDLPVDVGLARASAR------GRLDRFEQEGQAFFQKVREAFLARAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  +VD+A     V  ++ +++ +L+++
Sbjct: 176 AAPQRYVLVDAAQPLAQVQQSLDSLLPQLLER 207


>gi|283853941|ref|ZP_06371146.1| thymidylate kinase [Desulfovibrio sp. FW1012B]
 gi|283570672|gb|EFC18727.1| thymidylate kinase [Desulfovibrio sp. FW1012B]
          Length = 211

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 1/209 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEG+GK+T I LL   L+R    V VTREPGG    +  R +LLS       +
Sbjct: 1   MFITLEGIEGSGKSTQIGLLTTALERTGRTVRVTREPGGCGLGQTLRAILLSLETRNLDS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A R  HV  VIRPAL  G+++LCDRF DS+ AYQG   S     L  L +++
Sbjct: 61  RAELFLYLADRAQHVAEVIRPALAAGQVVLCDRFADSTIAYQGYGRSLDVALLQQLNDVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V    P  T++LD+  + GL+R   R     +   +  FE + +  H + R  +  +A  
Sbjct: 121 VAGTWPQLTLLLDIDPEQGLRRALARNLQAGTTAAEGRFEAEHLDFHGRVRDGYRTLASL 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P R   VD+     +VA  + ++V + +
Sbjct: 181 HPRRFVTVDATPDAATVAARVWDVVSQRL 209


>gi|313124284|ref|YP_004034543.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280847|gb|ADQ61566.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|325685698|gb|EGD27777.1| thymidylate kinase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 212

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 5/208 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+FEG +GAGKTT I+ + + +Q +   ++ VTREPGG+  AE  R ++L     E
Sbjct: 2   QGYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AA+R  HV  +I PAL  G +++ DRF+DSS AYQG+        +  + 
Sbjct: 62  MNAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQGRGLGIDEVAQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   + PD TI LDL    GL R+        S   D  E++ ++ HE+  + +  + 
Sbjct: 122 AFATGHLEPDLTIFLDLDPAQGLARIAK----VRSGSEDRLEQEKLVFHEEVYRGYQKVN 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  PDR  +VD++     V    + +V 
Sbjct: 178 QAHPDRVKVVDASQDLPQVVAASVKLVK 205


>gi|312864169|ref|ZP_07724403.1| dTMP kinase [Streptococcus vestibularis F0396]
 gi|322517269|ref|ZP_08070148.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124]
 gi|311100170|gb|EFQ58379.1| dTMP kinase [Streptococcus vestibularis F0396]
 gi|322124175|gb|EFX95709.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124]
          Length = 209

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKTT +  L   L+      V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTTVLEALLPRLREAYPAKVVTTREPGGVAIAEQIREVILDVNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L EG +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVERVLPELEEGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GL R+           ++  + + + +H++ RQ +LD
Sbjct: 121 LNAYATDGYKPDVTLLFDVDSETGLARIAANGE----REVNRLDLEKLDLHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+ +P+R  I+D++ +F+ V      ++   +
Sbjct: 177 LAQAEPERIKIIDASQAFEDVVEEAWKVIKGYL 209


>gi|78188893|ref|YP_379231.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
 gi|123579949|sp|Q3AS37|KTHY_CHLCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78171092|gb|ABB28188.1| thymidylate kinase [Chlorobium chlorochromatii CaD3]
          Length = 222

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/223 (33%), Positives = 123/223 (55%), Gaps = 6/223 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T ++ L  +L++++  +   REPGGTP AE+ R +LL         
Sbjct: 1   MLITFEGIDGAGKSTQVAKLVAYLKQQSTPLLSLREPGGTPTAESIRSLLLDNR-KSITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F+A+R + VE +IRPAL EGK ++ DRF DS+ AYQG         L S+  +S
Sbjct: 60  IAELLLFSASRAELVETLIRPALAEGKTVILDRFFDSTTAYQGHGRGISLEQLHSIIALS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKRRQIFLD 179
             +++PD T  LDL  +  L+R  +R  L      +S   D  E+  +  + K R  +L 
Sbjct: 120 TGDLLPDVTFYLDLEPEEALRRAFSRSGLPLDFAAQSNESDRMEQAGIAFYHKVRNGYLT 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           + +  P R   +D+     ++  +I+  V   ++  +SPL + 
Sbjct: 180 LMQQHPSRFVALDATQPPDTLHQHIIAEVETRLKLHISPLVAP 222


>gi|315612950|ref|ZP_07887861.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296]
 gi|315315060|gb|EFU63101.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296]
          Length = 212

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+           ++  + + + +H+K R+ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDMEGLDLHKKVRKGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRMVKIDASLPLEQVVDATKAVLFDRM 208


>gi|161831009|ref|YP_001596429.1| thymidylate kinase [Coxiella burnetii RSA 331]
 gi|164686003|ref|ZP_01946518.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177']
 gi|165919105|ref|ZP_02219191.1| thymidylate kinase [Coxiella burnetii RSA 334]
 gi|161762876|gb|ABX78518.1| thymidylate kinase [Coxiella burnetii RSA 331]
 gi|164601531|gb|EAX32890.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177']
 gi|165917174|gb|EDR35778.1| thymidylate kinase [Coxiella burnetii RSA 334]
          Length = 223

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 8/221 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGIEG GKTT ++ ++  L        VTREPGGTP AEA R VLLS   +  
Sbjct: 5   RGRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMM 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L  
Sbjct: 65  CPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAG 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +A 
Sbjct: 125 WVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALAN 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
            +P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 179 QEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217


>gi|282863636|ref|ZP_06272694.1| thymidylate kinase [Streptomyces sp. ACTE]
 gi|282561337|gb|EFB66881.1| thymidylate kinase [Streptomyces sp. ACTE]
          Length = 1023

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EG +GAGK+T +  L  +++ K ++V VTREPG TP  +  R +LL       
Sbjct: 506 TGFFLAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R +HV++V+RPAL  G I++ DR++DSS AYQG         +  +  
Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLSPTEIARISR 625

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P  T++LD+  +   +R         +   D  E +    H + R  FL +A 
Sbjct: 626 WATSGLVPHLTVLLDVDPETARERF--------TEAPDRLESEPPEFHNRVRSGFLTLAA 677

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  +VD+A   +++ T + + +  L+
Sbjct: 678 AAPLRYLVVDAAQEPEAITTVVRHRLDHLL 707


>gi|170017863|ref|YP_001728782.1| thymidylate kinase [Leuconostoc citreum KM20]
 gi|238688934|sp|B1MVT4|KTHY_LEUCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169804720|gb|ACA83338.1| Thymidylate kinase [Leuconostoc citreum KM20]
          Length = 214

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 5/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   LFI+FEG EGAGKT+ +  L   L+      +  TREPGG P +EA R +L     
Sbjct: 1   MTRPLFITFEGPEGAGKTSVLEALVSELKPILGDQLVTTREPGGNPISEAIRQILQPEDD 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +      EA+++AAAR  H+   I PAL  GK+L+ DR++DSS AYQG         +  
Sbjct: 61  NGMDDRTEALLYAAARRQHIVETILPALSAGKVLISDRYVDSSLAYQGGGRDLGVDNIWQ 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++  ++PD TI  D+P ++GL RV           +D  +++ +  H++ R  +L+
Sbjct: 121 INQFAIDGLLPDLTIYFDVPSELGLSRVMAN----RQGKIDRLDKESLSFHQRVRTTYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +  +  DR  I+D+      V ++   ++ E +  R
Sbjct: 177 LQHDFSDRIKIIDATQPLTDVISDTRALLQEALNSR 212


>gi|284050175|ref|ZP_06380385.1| thymidylate kinase [Arthrospira platensis str. Paraca]
 gi|291571445|dbj|BAI93717.1| thymidylate kinase [Arthrospira platensis NIES-39]
          Length = 231

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 71/223 (31%), Positives = 112/223 (50%), Gaps = 19/223 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50
           +G  I FEGIEG GKTT I  ++ +L  +               V VTREPGGT   +  
Sbjct: 2   AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSPGGKLHQPGVQVTREPGGTQLGQHL 61

Query: 51  RHVLLSCG-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           R +LL     +     +E +++AA R  H+E +I+P L +G ++LCDRF DS+ AYQG  
Sbjct: 62  RDLLLHHEINEPLSDRSELLLYAADRAQHIETLIKPLLDQGTMILCDRFTDSTLAYQGYG 121

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +  + +I+   ++PD T+ L++PV+ GL R++ R         D  E+ D+  
Sbjct: 122 RGLDLQQIHQINQIATGGLVPDLTLWLNVPVEAGLTRIKARKKA------DRIEQADLEF 175

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           H +  + F  +A+  P R   +D       V   I NI+ + +
Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKL 218


>gi|209527775|ref|ZP_03276269.1| dTMP kinase [Arthrospira maxima CS-328]
 gi|209491808|gb|EDZ92169.1| dTMP kinase [Arthrospira maxima CS-328]
          Length = 231

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 19/223 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50
           +G  I FEGIEG GKTT I  ++ +L  +               V VTREPGGT   +  
Sbjct: 2   AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSSGGKLHQRGVQVTREPGGTQLGQHL 61

Query: 51  RHVLLSCGV-DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           R +LL   + +     +E +++AA R  H+E +I+P L +G I+LCDRF DS+ AYQG  
Sbjct: 62  RDLLLHHDIREPLSDRSELLLYAADRAQHIETLIKPLLDQGTIILCDRFTDSTLAYQGYG 121

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +  + +I+   V+PD T+ L++PV+ GL R++ R  +      D  E+ D+  
Sbjct: 122 RGLDLQQIHQINQIATGGVVPDLTLWLNVPVEAGLTRIKARKKV------DRIEQADLEF 175

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           H +  + F  +A+  P R   +D       V   I NI+ + +
Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKL 218


>gi|90962199|ref|YP_536115.1| thymidylate kinase [Lactobacillus salivarius UCC118]
 gi|227891204|ref|ZP_04009009.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741]
 gi|122448751|sp|Q1WSU7|KTHY_LACS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|90821393|gb|ABE00032.1| Thymidylate kinase [Lactobacillus salivarius UCC118]
 gi|227867078|gb|EEJ74499.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741]
          Length = 208

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 5/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+FEGI+G+GKT+ +  +   L  K  D    TREPGG   +EA R ++L+    E 
Sbjct: 3   GKFITFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+ + + PAL EGK++LCDRF+DSS  YQG         +  L E
Sbjct: 63  DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVIKLNE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + PD T+  D+  +I LKR+ N         +D  +++ +  + K RQ +L +A 
Sbjct: 123 FATENLKPDLTLYYDVEPEISLKRISNN----RQNQVDRLDKESMDFYHKVRQAYLSLAE 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  +R  ++D++ +   V  + L+I+   +
Sbjct: 179 SNKERIKVIDASQNLDKVIDDTLSILNNFM 208


>gi|225867971|ref|YP_002743919.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
 gi|259494281|sp|C0MGT8|KTHY_STRS7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225701247|emb|CAW98209.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus]
          Length = 211

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 5/202 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I+FEG +GAGKTT +  L   LQ      +  TREPGG   AE  R ++L    
Sbjct: 1   MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I PAL  G ++L DRF+DSS AYQG         +  
Sbjct: 61  TTMDDKTELLLYIAARRQHLVEKIMPALEAGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   V PD T+  D+P ++GL R+           ++  + + + +H++ R+ +L+
Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE----REVNRLDLEQLDLHQRVRKGYLE 176

Query: 180 IARNQPDRCHIVDSAHSFQSVA 201
           +A   P R   +D++   +SV 
Sbjct: 177 LALENPQRIVKIDASQDLESVV 198


>gi|322392107|ref|ZP_08065569.1| thymidylate kinase [Streptococcus peroris ATCC 700780]
 gi|321145007|gb|EFX40406.1| thymidylate kinase [Streptococcus peroris ATCC 700780]
          Length = 212

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  +   L+ KN +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSIEGPEGAGKTSVLEAILPVLEEKNIEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL+R+    +      ++  + + + +H K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAANSN----REVNRLDLEGLDLHRKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++     V  N   ++++ +
Sbjct: 177 LEKEGERIVKIDASLPLDQVVENTKQVLFDRM 208


>gi|313668856|ref|YP_004049140.1| thymidylate kinase [Neisseria lactamica ST-640]
 gi|313006318|emb|CBN87781.1| putative thymidylate kinase [Neisseria lactamica 020-06]
          Length = 208

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPATKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P ++ + R+        +   D FE+++    ++ RQ++L  A  QP
Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ------TREKDRFEQEEAGFFKRVRQVYLQRAGRQP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D + S ++V   I
Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196


>gi|269925799|ref|YP_003322422.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789459|gb|ACZ41600.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798]
          Length = 216

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 118/213 (55%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG+GKTT   +L   L+     V +TREPGGT   E  R +LL     +   
Sbjct: 1   MFITFEGPEGSGKTTQARMLATALETLQCKVVLTREPGGTLVGEEIRKILLGPLGKDLDP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   ++F+AAR   V ++I+PA+  GKI++CDR+ DS+ AYQ   D      ++   ++ 
Sbjct: 61  KCILLLFSAARAQLVRHIIKPAIDSGKIVICDRYADSTRAYQWGGDGIPRDEVERAIQLG 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + PD T  LDL  + GL+R +   +    +  +  + +++  H++ R+ +L +A+  
Sbjct: 121 TEGLEPDITFYLDLSPEEGLRRRRTDSARGAESGWNSMDARELEFHQRVREAYLSLAKEY 180

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
             R +++D+A   + +   I+ IV + +Q R+ 
Sbjct: 181 SSRFYVIDAAGRIEDIHRTIIEIVNKKLQSRIG 213


>gi|295094265|emb|CBK83356.1| thymidylate kinase [Coprococcus sp. ART55/1]
          Length = 207

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+ EG +GAGKTT   LLK +L++K YDV +TR+PGG P +EA R V+L+    E 
Sbjct: 2   RGIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKDFTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E +++A+AR   V+  I+PAL  G+ ++ DRF+DSS  YQG         +  + E
Sbjct: 62  GYMTELLLYASARAQLVKENIKPALDAGQAVIADRFVDSSAVYQGIGRGLGVDTVYKVNE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++Q +MPD T ++DL    G+ R +N       A LD  E + +  H+K    +  +A 
Sbjct: 122 FALQGIMPDMTFLMDLDAQEGISRKKN------QAELDRMENEKMEFHQKVVDGYRMLAD 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +R   +D+      +   I+  V + + 
Sbjct: 176 MHTERIVKIDATLPIDEIHGIIVGYVEKKLN 206


>gi|281356872|ref|ZP_06243362.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548]
 gi|281316430|gb|EFB00454.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548]
          Length = 219

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 3/213 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVD 60
           + G  I+FEG EGAGK+T + LL  +L+ K ++V  TREPGGTP AE  R V+ +  G +
Sbjct: 9   HPGRLITFEGPEGAGKSTQLKLLAGYLEEKGFEVIATREPGGTPLAERLRAVIKAFEGEE 68

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++  AAR  HV  VIRPAL  GKI+LCDR+ DS+ AYQG         +D+L
Sbjct: 69  KLHNTTELLLIEAARSQHVREVIRPALAAGKIVLCDRYFDSTTAYQGGARGFDAEAIDAL 128

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++++ E  PD T++ DL  + G  R + R         D FE + +  H + R+ +L I
Sbjct: 129 NDLAIAECAPDLTLLFDLTPEAGFARTRTRTET--QGEHDRFEEEKLEFHRQVRESYLTI 186

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A  +P+R  +V +    Q + T +  +V EL++
Sbjct: 187 AAREPERVRVVAADRPAQEIQTEVRKLVDELIR 219


>gi|289167781|ref|YP_003446050.1| thymidylate kinase [Streptococcus mitis B6]
 gi|288907348|emb|CBJ22185.1| thymidylate kinase [Streptococcus mitis B6]
          Length = 212

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LEKEGNRIVKIDASFPLEQVVETTKAVLFDRM 208


>gi|268318943|ref|YP_003292599.1| hypothetical protein FI9785_450 [Lactobacillus johnsonii FI9785]
 gi|262397318|emb|CAX66332.1| tmk [Lactobacillus johnsonii FI9785]
          Length = 213

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ + + L +   +   VTREPGG+  +E  R ++L     E
Sbjct: 2   RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG   +     +  + 
Sbjct: 62  MDDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQGVGRNLGIEEVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD TI LDL   +GL R++       +   D  E++ +  H K    + ++ 
Sbjct: 122 DFGTGGLEPDLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              PDR   VD+    + VA N + I+ + +
Sbjct: 178 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 208


>gi|104774437|ref|YP_619417.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116514536|ref|YP_813442.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|122274732|sp|Q048W8|KTHY_LACDB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123378380|sp|Q1G923|KTHY_LACDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|103423518|emb|CAI98420.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116093851|gb|ABJ59004.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|325126247|gb|ADY85577.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 212

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 5/208 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+FEG +GAGKTT I+ + + +Q +   ++ VTREPGG+  AE  R ++L     E
Sbjct: 2   QGYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AA+R  HV  +I PAL  G +++ DRF+DSS AYQG+        +  + 
Sbjct: 62  MNAKTEALLYAASRSQHVSEIINPALKRGDLVMSDRFVDSSLAYQGQGRGLGIDEVAQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   + PD TI LDL    GL R+        S   D  E++ +  HE+  + +  + 
Sbjct: 122 AFATGHLEPDLTIFLDLDPAQGLARIAK----VRSGSEDRLEQEKLAFHEEVYRGYQKVN 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  PDR  +VD++     V    + +V 
Sbjct: 178 QAHPDRVKVVDASQDLPQVVAASVKLVK 205


>gi|320526760|ref|ZP_08027950.1| thymidylate kinase [Solobacterium moorei F0204]
 gi|320132728|gb|EFW25268.1| thymidylate kinase [Solobacterium moorei F0204]
          Length = 211

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+FEG +G+GKTT  + +   L+   Y V  TREPGG+  AE  RHV+L     
Sbjct: 1   MKTGLFITFEGPDGSGKTTVSTAVTNMLEADGYQVRYTREPGGSNIAEQIRHVILDPKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  EA+++AA+R  H+ + + P L +G  ++ DRF+DSS AYQG         +  +
Sbjct: 61  EMDARTEALLYAASRRQHLIDKVLPVLEQGVHVISDRFVDSSLAYQGCGREIGMDEVYEI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +++  MPD TI L +  + GLKR+           LD  +++ V  H++  + +  +
Sbjct: 121 NQFAIENHMPDKTIFLQIDAETGLKRIHK-----GREVLDRLDQESVEFHQRVHEGYQKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                DR  IVD+     +V      IV  L+  +
Sbjct: 176 IEKYADRMIIVDATADVDTVIQKSYEIVKGLLDAQ 210


>gi|154706615|ref|YP_001424915.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111]
 gi|154355901|gb|ABS77363.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111]
          Length = 223

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 8/221 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGIEG GKTT ++ ++  L        VTREPGGTP AEA R VLLS   +  
Sbjct: 5   RGRFISFEGIEGVGKTTALNWVREQLDATRIPYVVTREPGGTPIAEAIRDVLLSHSDEMM 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L  
Sbjct: 65  CPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAG 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +A 
Sbjct: 125 WVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALAN 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
            +P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 179 QEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217


>gi|138893702|ref|YP_001124155.1| thymidylate kinase [Geobacillus thermodenitrificans NG80-2]
 gi|196250745|ref|ZP_03149432.1| dTMP kinase [Geobacillus sp. G11MC16]
 gi|166221745|sp|A4IJA6|KTHY_GEOTN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|134265215|gb|ABO65410.1| Thymidylate kinase [Geobacillus thermodenitrificans NG80-2]
 gi|196209695|gb|EDY04467.1| dTMP kinase [Geobacillus sp. G11MC16]
          Length = 225

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F SFEG EGAGKTT I  L+ FL+ + +DV VTREPGG   AEA R ++L+    E 
Sbjct: 2   NGYFFSFEGPEGAGKTTMIGKLESFLRERGFDVMVTREPGGVRIAEAIRALILNREYTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   I PAL  G+++LCDRF+DSS AYQG         +  + E
Sbjct: 62  DGRTEALLYAAARRQHLLEKIVPALEAGRVVLCDRFVDSSLAYQGFARGLGVEEVWKINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++   MP  T+  D+   IGL+R++          ++  + + +  H+K R+ +  +A+
Sbjct: 122 FAIDGYMPSLTVYFDIDPQIGLERIRQNRE----REVNRLDLETLSFHDKVREGYRKLAK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +R  ++D++     V +  +  V   ++
Sbjct: 178 RFAERIVVIDASRPLDDVFSETVATVLSRLE 208


>gi|147676397|ref|YP_001210612.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
 gi|189030835|sp|A5D690|KTHY_PELTS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146272494|dbj|BAF58243.1| thymidylate kinase [Pelotomaculum thermopropionicum SI]
          Length = 216

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 112/210 (53%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG++G+GKTT I LL   L+     V  TREPGGT   E  R +LL+    E 
Sbjct: 2   KGKFIVFEGVDGSGKTTQIKLLGEKLESMGCPVVYTREPGGTRVGERIREILLNPLYGEL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AAAR  HV  VI PAL EGK++LCDRF DSS AYQG         L+ +  
Sbjct: 62  VPWAEALLYAAARAQHVAQVILPALREGKVVLCDRFTDSSLAYQGYGRGVDIEMLEQVNR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   V+PD  ++LD   +   +R+      R     D  ER+    + + R  +L +A 
Sbjct: 122 PAAAGVVPDLVLVLDFDREGQTERMA-----RSGRSADRIEREAQEFYRRVRSGYLALAA 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++D++ + + V  ++L    E++
Sbjct: 177 RAPRRYRVIDASRAEKLVHLDVLKAAEEVL 206


>gi|304315605|ref|YP_003850750.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302777107|gb|ADL67666.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 205

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+FEGI+G+GKTT I+LLK +L     D+ V REPGGT   E  R++LL     
Sbjct: 1   MYKGKLITFEGIDGSGKTTQINLLKEYLLNIGRDIVVLREPGGTSVGEKIRNILLDKKN- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    AEA+++AA+R + V+ VI P+L  GKI++ DRF+DSS  YQG         ++ +
Sbjct: 60  KIVPTAEALLYAASRAELVKEVIIPSLNNGKIVILDRFVDSSIVYQGYARGIGVKAVEEI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I++  ++PD TI LD+     +KR+  R         D  E +D+  HEK  + +  +
Sbjct: 120 NNIAIAGLVPDLTIYLDIKPKDTIKRIDRRKDK------DRLEMEDLEFHEKVYEGYKQL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +++PDR  ++D+ H    +  +I+  + +++
Sbjct: 174 IKSRPDRYLVIDATHDIDYIQKSIVKEISKII 205


>gi|218283200|ref|ZP_03489270.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989]
 gi|218216018|gb|EEC89556.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989]
          Length = 212

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 6/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+FEG +G+GKTT    ++  L +  YD   TREPGG+  AE+ R++LL     
Sbjct: 3   MKQGVFITFEGNDGSGKTTVCKAVQEELIKMGYDCIYTREPGGSKIAESIRNILLDVNNT 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R  H++ V+ PAL   KI+LCDRF+DSS AYQG         +  +
Sbjct: 63  EMDDRTEALLYAASRRQHLKEVVLPALENKKIVLCDRFIDSSLAYQGIARGIGLKEVWDI 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++   MP+ T+ L + V+ G KR+  R        L+  ++++   H+  RQ +  +
Sbjct: 123 NQFAIDGCMPEKTLFLSVSVETGKKRMNLRGD------LNRLDQEESSFHKAVRQGYETL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               P+R  ++D+    + V  + +  V +++++ 
Sbjct: 177 VSMYPERIEVIDAEPCKEEVLKSAMECVLKVIKEH 211


>gi|227888765|ref|ZP_04006570.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200]
 gi|227850602|gb|EEJ60688.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200]
          Length = 217

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ + + L +   +   +TREPGG+  +E  R ++L     E
Sbjct: 6   RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLITREPGGSKISENIRTIILDPENKE 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG   +     +  + 
Sbjct: 66  MDDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQGVGRNLGIEEVKQIN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD TI LDL   +GL R++       +   D  E++ +  H K    + ++ 
Sbjct: 126 DFGTGGLEPDLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELL 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              PDR   VD+    + VA N + I+ + +
Sbjct: 182 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 212


>gi|126739768|ref|ZP_01755459.1| thymidylate kinase [Roseobacter sp. SK209-2-6]
 gi|126719000|gb|EBA15711.1| thymidylate kinase [Roseobacter sp. SK209-2-6]
          Length = 221

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 6/212 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEGI+G+GK+T   LL   L+    +V +TREPGG+P AE  R ++L    D++ 
Sbjct: 11  GLFLTFEGIDGSGKSTQCKLLAEALRFAGKEVVLTREPGGSPGAEEIRRIVLEGDPDKWS 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L ++
Sbjct: 71  AETEILLFTAARRDHLERTILPALKAGKVVICDRFADSTRMYQGLSRGDLRQTVDQLHDL 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +Q   PD T+++D+  + GL R + R    E      FE   + + ++ R  FL +A+ 
Sbjct: 131 MIQR-EPDLTLLIDMDPETGLSRAKGRQGREE-----RFEDFGLGLQQQMRAGFLSLAQE 184

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              R  ++D       VA  +L +  + +  R
Sbjct: 185 FNKRFRVIDGTQPIDKVAAKVLAVAQDELSIR 216


>gi|291455870|ref|ZP_06595260.1| dTMP kinase [Bifidobacterium breve DSM 20213]
 gi|291382279|gb|EFE89797.1| dTMP kinase [Bifidobacterium breve DSM 20213]
          Length = 206

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
           SGLF+SFEG++G GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL     G 
Sbjct: 2   SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAVRQLLLHGVNEGA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV   IRPAL  G++++ DR+LDSS AYQ          + S
Sbjct: 62  ADIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTSEEIRS 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++PD T +LD+   +   R+++          D  E        + RQ FLD
Sbjct: 122 LSMWATNNLLPDRTYLLDMDPTLSHNRLEH--------AEDRMESAGDDFQSRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +A  +P+R  ++D++ S + V   I   + EL
Sbjct: 174 LAAVEPNRFRVIDASQSIEQVWAAIEADIKEL 205


>gi|256822417|ref|YP_003146380.1| thymidylate kinase [Kangiella koreensis DSM 16069]
 gi|256795956|gb|ACV26612.1| thymidylate kinase [Kangiella koreensis DSM 16069]
          Length = 216

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/216 (39%), Positives = 129/216 (59%), Gaps = 6/216 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+ EG EG GK+T+I+ +K + + KN  +  TREPGGTP AE  R +LLS   ++
Sbjct: 5   SRGKFITIEGTEGVGKSTNIAFIKAWFEAKNISLLHTREPGGTPFAEEIRELLLSQREEQ 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A++E ++  AAR  HV   I+PAL + + +LCDRF D+S+AYQG   +     L  L 
Sbjct: 65  VDAKSELLLMYAARAQHVSQKIKPALEQRQWVLCDRFSDASFAYQGAGRALGLNKLSELD 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  ++   PD TI+LDLPV++GL R Q R        +D FE + V   E+ RQ +L IA
Sbjct: 125 QWVLEGFKPDLTILLDLPVEVGLSRAQER------GPIDRFEEEKVEFFEQVRQGYLQIA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + +P+R  IVD+  S + V   I  ++    Q++V+
Sbjct: 179 QQEPERMKIVDARGSLEKVQQQIEQVLIHFYQQQVT 214


>gi|39935842|ref|NP_948118.1| thymidylate kinase [Rhodopseudomonas palustris CGA009]
 gi|81562489|sp|Q6N643|KTHY_RHOPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|39649696|emb|CAE28217.1| thymidylate kinase [Rhodopseudomonas palustris CGA009]
          Length = 230

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 131/211 (62%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T I LL + L++      VTREPGG+P AEA R  LL+      
Sbjct: 12  RGRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLAGIGKLI 71

Query: 63  G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           G A+AEA++FAAAR DHV  +I PAL  G+ +LCDRF DS+ AYQG+  +     L++LQ
Sbjct: 72  GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ ++ PD T+ILD+PV+IGL R   R   R S   D FE + +  H   R++F  IA
Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+RC ++D+    + VA  I   V   +
Sbjct: 189 AQEPERCVLIDANAEPEEVADRIWQAVRLRL 219


>gi|89101171|ref|ZP_01174003.1| thymidylate kinase [Bacillus sp. NRRL B-14911]
 gi|89084106|gb|EAR63275.1| thymidylate kinase [Bacillus sp. NRRL B-14911]
          Length = 212

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFI+ EG EGAGKTT I++L   L  + Y V  TREPGG   AE  R V+L     
Sbjct: 2   MDKGLFITAEGPEGAGKTTIINMLASGLADEGYKVMQTREPGGIEIAEQIRAVILDTKNT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H+   ++PAL EG I+LCDRF+DSS AYQG         + S+
Sbjct: 62  AMDPRTEALLYAAARRQHLAEKVQPALDEGYIVLCDRFIDSSLAYQGYARGLGIDEVYSI 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +++ +MP+ T+  D+    GL+R+  R   RE   ++  + + +  H K R+ +  +
Sbjct: 122 NHFAIEGMMPELTLYFDIDPASGLQRI-GRNQGRE---VNRLDLESLEFHTKVREGYEIL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               PDR   +D++   + V       +  L   +
Sbjct: 178 LAKFPDRISRIDASLPVEEVYQLASARLKSLFADK 212


>gi|167042818|gb|ABZ07536.1| putative thymidylate kinase [uncultured marine microorganism
           HF4000_ANIW137I15]
          Length = 247

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 7/218 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ I+FEGIEG+GKTT  SLL   L+ +   V  TREPGGT   E  R ++L  G +  
Sbjct: 24  AGILITFEGIEGSGKTTQASLLADRLREQGLSVFPTREPGGTHLGEGIRRLVLEPGQEAI 83

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  AAR  HV   IRPAL  GK++LCDRF DS+  YQG         ++ +  
Sbjct: 84  DPVAELFLMEAARAQHVAAKIRPALDAGKVVLCDRFTDSTLVYQGLARGLAWKTIEDVNL 143

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS-------LRESACLDYFERKDVMIHEKRRQ 175
           ++ + + P  TI+LDL +  GL R + R           E+   + F+ +D   HE  R 
Sbjct: 144 LAAKGIRPHTTILLDLDISAGLARTRTRADSAVQADGSIETGETNRFDLEDREFHEIVRS 203

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            FL +A+  P R  +V +A S + V   +   + + ++
Sbjct: 204 GFLRLAKEDPGRVKVVRAAGSAEEVHEEVWRALEKTLE 241


>gi|172056067|ref|YP_001812527.1| dTMP kinase [Exiguobacterium sibiricum 255-15]
 gi|229621736|sp|B1YGD3|KTHY_EXIS2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|171988588|gb|ACB59510.1| dTMP kinase [Exiguobacterium sibiricum 255-15]
          Length = 212

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +GAGKTT + LL   L  + Y++ +TREPGGT      R ++L+    E 
Sbjct: 2   TGTFITVEGPDGAGKTTQLQLLADRLTAEGYEIVMTREPGGTRIGNEIRSLILNPDFQEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++AA+R  HV  +IRPAL  GKI+LCDRF+D+S AYQG         + S+ +
Sbjct: 62  DEMTEILLYAASRAQHVNELIRPALAAGKIVLCDRFIDASIAYQGYGLGYTIEQVRSINQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T + DL V    +R+ +R        LD  E++D    ++    F+ +A 
Sbjct: 122 QATNHLTPDRTYLFDLTVSESKQRMMDR------GALDRIEQRDDAFRQRVYDGFMTLAV 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P+R  +VD+  S +S+ T +   V   ++KR
Sbjct: 176 QEPERIQLVDANQSIESLQTELCKDVLTYLKKR 208


>gi|317123732|ref|YP_004097844.1| thymidylate kinase [Intrasporangium calvum DSM 43043]
 gi|315587820|gb|ADU47117.1| thymidylate kinase [Intrasporangium calvum DSM 43043]
          Length = 223

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 10/208 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF+ FEG +GAGK+T + LL   L+R    V VTR+PGGTP     R ++L    D    
Sbjct: 22  LFVCFEGGDGAGKSTQVRLLAAALERAGRQVLVTRQPGGTPLGAQIRELVLHG--DHVSP 79

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AEA++FAA +  HV+ +IRPAL  G++++ DR+ DSS AYQG         +  LQ  +
Sbjct: 80  RAEALLFAADKAHHVDELIRPALAGGRVVITDRYTDSSIAYQGAGRDLGADEIRQLQHWA 139

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           V  + PD T++LD+  D+G  R             D  E +    H   RQ FLD+A  +
Sbjct: 140 VGGLFPDLTVLLDVSPDVGRSR--------RGEVHDRLESEADDFHAAVRQGFLDLAARE 191

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           PDR  +VD+      +   +L  +  ++
Sbjct: 192 PDRYLVVDAGLPADQIHRRVLARLGPIL 219


>gi|309378939|emb|CBX22392.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 208

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPATKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P ++ + R+            D FE+++    ++ RQ++L  A  QP
Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ------MREKDRFEQEEAGFFKRVRQVYLQRAGRQP 177

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D + S ++V   I
Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196


>gi|304385465|ref|ZP_07367810.1| thymidylate kinase [Pediococcus acidilactici DSM 20284]
 gi|304328672|gb|EFL95893.1| thymidylate kinase [Pediococcus acidilactici DSM 20284]
          Length = 209

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 73/214 (34%), Positives = 123/214 (57%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN G FISFEG +GAGKTT +  +    + +  D + VTREPGG P +EA R ++L    
Sbjct: 1   MN-GHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNN 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E  A  EA+++AAAR  H+   I PAL  G+++ CDR++DSS AYQG         +  
Sbjct: 60  TEMDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQ 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   + +  +P+ TI LD+  ++GLKR+        +  +D  + + +  HE+ R  +L 
Sbjct: 120 MNLFATEGCLPEKTIYLDVSAEVGLKRIM----THRTDDVDRLDLEQLDFHERVRDAYLA 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+  P+R  ++D++ S   V   ++N++ ++++
Sbjct: 176 LAKRYPERIVVIDASQSIGDVKKAVINVLDQILK 209


>gi|170744323|ref|YP_001772978.1| dTMP kinase [Methylobacterium sp. 4-46]
 gi|168198597|gb|ACA20544.1| dTMP kinase [Methylobacterium sp. 4-46]
          Length = 226

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 1/197 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+ EG EGAGK+T ++ L  +L+R + +V  TREPGG+P AE  R  LL+    +
Sbjct: 6   RPGLFITLEGGEGAGKSTQVARLAEWLRRSDREVVTTREPGGSPRAEQIRTALLAGAAKD 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AEA++F+AARLDH+ ++IRPAL  G +++CDRF DS+ AYQG         + +L+
Sbjct: 66  HGPFAEALLFSAARLDHLASLIRPALARGAVVVCDRFADSTRAYQGVAGGIDPECVAALE 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + V    PD T+ILDLP +IGL R + R     +   D FE + +  H++ R+ F  IA
Sbjct: 126 RVVVGATRPDLTLILDLPPEIGLARARGRERGL-ARGPDRFEAEALAFHQRLREAFRGIA 184

Query: 182 RNQPDRCHIVDSAHSFQ 198
             +P RC +VD+A    
Sbjct: 185 AREPARCALVDAAGEPD 201


>gi|309800190|ref|ZP_07694374.1| thymidylate kinase [Streptococcus infantis SK1302]
 gi|308116178|gb|EFO53670.1| thymidylate kinase [Streptococcus infantis SK1302]
          Length = 212

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 4/215 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  +   L+ +  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEAIIPILEDRGIEVLSTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  EMDPKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDKKAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +   + PD T+  D+ V+ GL R+           ++  + + + +H K RQ +L +
Sbjct: 121 NEFATDGLKPDLTLYFDIEVEEGLARIAANSD----REINRLDMEGLDLHRKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              + DR   +D++     V  N   ++++ +  R
Sbjct: 177 LEKEADRIVKIDASLPLDQVIANTQQLLFDRMGLR 211


>gi|269214814|ref|ZP_06158844.1| dTMP kinase [Neisseria lactamica ATCC 23970]
 gi|269208972|gb|EEZ75427.1| dTMP kinase [Neisseria lactamica ATCC 23970]
          Length = 210

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 7/199 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+      G  
Sbjct: 7   FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPATKA-GLR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 66  AETMMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P ++ + R+        +   D FE+++    ++ RQ++L  A  QP
Sbjct: 126 GGLKPDLTLLLDVPPEVSMARIGQ------TREKDRFEQEEAGFFKRVRQVYLQRAGRQP 179

Query: 186 DRCHIVDSAHSFQSVATNI 204
           +R  ++D + S ++V   I
Sbjct: 180 ERYAVIDGSRSPEAVGHQI 198


>gi|301801780|emb|CBW34491.1| thymidylate kinase [Streptococcus pneumoniae INV200]
          Length = 212

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    +      ++  + + +++H+K R+ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLVLHKKVRKGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFDRM 208


>gi|309803553|ref|ZP_07697646.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d]
 gi|312870920|ref|ZP_07731025.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a]
 gi|308164437|gb|EFO66691.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d]
 gi|311093610|gb|EFQ51949.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a]
          Length = 213

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 114/211 (54%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R+++L     E
Sbjct: 2   KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG         +  + 
Sbjct: 62  MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  + 
Sbjct: 122 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R   VD+  S   VA+  + I+ E +
Sbjct: 178 SAYPERIKRVDAELSIAEVASQSVKILEEYM 208


>gi|298530498|ref|ZP_07017900.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509872|gb|EFI33776.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 223

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 1/210 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGIEG GK+T    L+ +L+   Y V VT EPGG+      R +LLS   D+   
Sbjct: 1   MFITFEGIEGCGKSTQTEFLRDYLEGLGYSVLVTLEPGGSRLGVELRRMLLSLESDDLTR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  ++ A R  HV  VIRPAL  G+I++ DRF  S+ AYQG         L  +  ++
Sbjct: 61  EAELFLYLADRAQHVHQVIRPALEAGRIVISDRFTHSTLAYQGYGREMGVDALQEMNIMA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           V   +PD T +LDLP + GL+R   R   +     +  FE + +  H + RQ +L++A  
Sbjct: 121 VDGTVPDITFLLDLPPETGLRRALGRNMEKNLTSSEGRFEAEALEFHVRVRQGYLELASR 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + ++  ++D+    ++V   ++  V E+++
Sbjct: 181 KKEKIVVLDAQALPETVFQGVVGKVNEIMK 210


>gi|256384283|gb|ACU78853.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385116|gb|ACU79685.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455961|gb|ADH22196.1| dTMP kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 213

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEAIAEQIRQIILDNKNKDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   +     +  +Q+I 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVSEVQQIV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  D+      KR+Q R      +  +  +++     +K  Q +L++ +N 
Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----SSKNRLDKEKSDFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R  ++D+      V    + I+ E +++
Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKE 206


>gi|304405877|ref|ZP_07387535.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9]
 gi|304345120|gb|EFM10956.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9]
          Length = 211

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 7/217 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EGAGKTT IS L   L      V +TREPGG P AE  R V+L     
Sbjct: 1   MEQGVFITIEGGEGAGKTTIISRLAAELSALGDTVTITREPGGIPIAEQIRAVILDRNHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H+   + PAL +G ++LCDRF+DSS AYQG         + ++
Sbjct: 61  GMDGRTEALLYAAARRQHLVEKVVPALEKGHVVLCDRFIDSSLAYQGHARGIGMEAVLAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++  +MP  T+ LD+  ++GL+R+Q      E   ++  + + +  HE+ R+ FL +
Sbjct: 121 NAFAIDGMMPKLTLYLDVRPEVGLRRIQE----AEVREINRIDLEAITFHEQVREGFLQL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A+   DR  ++D+  S  +V    ++I+   +++R  
Sbjct: 177 AQMYSDRIVVIDAEQSADAVFEQCMSII---LKRRAG 210


>gi|330891466|gb|EGH24127.1| thymidylate kinase [Pseudomonas syringae pv. mori str. 301020]
          Length = 189

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/194 (40%), Positives = 111/194 (57%), Gaps = 6/194 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG         +  L+E
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ DLPV+IGL R   R        LD FE++     +  R  +L  A+
Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175

Query: 183 NQPDRCHIVDSAHS 196
             P R  +VD+A  
Sbjct: 176 ADPARYRLVDAAQP 189


>gi|316934063|ref|YP_004109045.1| thymidylate kinase [Rhodopseudomonas palustris DX-1]
 gi|315601777|gb|ADU44312.1| thymidylate kinase [Rhodopseudomonas palustris DX-1]
          Length = 230

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/211 (43%), Positives = 132/211 (62%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T I LL + L++      VTREPGG+P AEA R  LL+      
Sbjct: 12  RGRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLAGIGKLI 71

Query: 63  G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           G A+AEA++FAAAR DHV  +I PAL  G+ +LCDRF DS+ AYQG+  + +   L++LQ
Sbjct: 72  GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVRLELLEALQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ ++ PD T+ILD+PV+IGL R   R   R S   D FE + +  H   R++F  IA
Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+RC ++D+    + VA  +   V   +
Sbjct: 189 AQEPERCVLIDANAEPEEVADRVWQAVRLRL 219


>gi|323126677|gb|ADX23974.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 211

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 113/214 (52%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  +   L+ + + ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + P+ T+  D+P +IGL R+       ++  ++  + + V +H++ R+ +L 
Sbjct: 121 LNRFATDGLEPNLTLYFDVPSEIGLARIAAN----KNREVNRLDLEAVDMHQRVREGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+ QP+R   +D++   + V    L  +  L++
Sbjct: 177 LAQEQPNRIVTIDASKPLEDVVDVALAHILALME 210


>gi|307704911|ref|ZP_07641802.1| thymidylate kinase [Streptococcus mitis SK597]
 gi|307621525|gb|EFO00571.1| thymidylate kinase [Streptococcus mitis SK597]
          Length = 212

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALETGKLVIMDRFIDSSLAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    +      ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIVANSN----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +  R   +D++   + V      ++++ +
Sbjct: 177 LDKEGSRIVKIDASLPLEQVVETTKAVLFDRM 208


>gi|300811154|ref|ZP_07091666.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497858|gb|EFK32868.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 212

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 5/208 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+FEG +GAGKTT I+ + + +Q +   ++ VTREPGG+  AE  R ++L     E
Sbjct: 2   QGYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+ EA+++AA+R  HV  +I PAL  G +++ DRF+DSS AYQG+        +  + 
Sbjct: 62  MNAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQGRGLGIDEVAQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   + PD TI LDL    GL R+        S   D  E++ +  HE+  + +  + 
Sbjct: 122 AFATGYLEPDLTIFLDLDPAQGLARIAK----VRSGSEDRLEQEKLSFHEEVYRGYQKVN 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  PDR  +VD++     V    + ++ 
Sbjct: 178 QAHPDRVKVVDASQDLPQVVAASVKLMK 205


>gi|257879313|ref|ZP_05658966.1| thymidylate kinase [Enterococcus faecium 1,230,933]
 gi|257881871|ref|ZP_05661524.1| thymidylate kinase [Enterococcus faecium 1,231,502]
 gi|257885061|ref|ZP_05664714.1| thymidylate kinase [Enterococcus faecium 1,231,501]
 gi|257890139|ref|ZP_05669792.1| thymidylate kinase [Enterococcus faecium 1,231,410]
 gi|257893467|ref|ZP_05673120.1| thymidylate kinase [Enterococcus faecium 1,231,408]
 gi|258615719|ref|ZP_05713489.1| thymidylate kinase [Enterococcus faecium DO]
 gi|260558755|ref|ZP_05830944.1| thymidylate kinase [Enterococcus faecium C68]
 gi|261207350|ref|ZP_05922037.1| thymidylate kinase [Enterococcus faecium TC 6]
 gi|289566857|ref|ZP_06447266.1| thymidylate kinase [Enterococcus faecium D344SRF]
 gi|293559585|ref|ZP_06676119.1| thymidylate kinase [Enterococcus faecium E1162]
 gi|293567580|ref|ZP_06678924.1| thymidylate kinase [Enterococcus faecium E1071]
 gi|294615743|ref|ZP_06695593.1| thymidylate kinase [Enterococcus faecium E1636]
 gi|294617668|ref|ZP_06697295.1| thymidylate kinase [Enterococcus faecium E1679]
 gi|294621756|ref|ZP_06700916.1| thymidylate kinase [Enterococcus faecium U0317]
 gi|257813541|gb|EEV42299.1| thymidylate kinase [Enterococcus faecium 1,230,933]
 gi|257817529|gb|EEV44857.1| thymidylate kinase [Enterococcus faecium 1,231,502]
 gi|257820913|gb|EEV48047.1| thymidylate kinase [Enterococcus faecium 1,231,501]
 gi|257826499|gb|EEV53125.1| thymidylate kinase [Enterococcus faecium 1,231,410]
 gi|257829846|gb|EEV56453.1| thymidylate kinase [Enterococcus faecium 1,231,408]
 gi|260075214|gb|EEW63527.1| thymidylate kinase [Enterococcus faecium C68]
 gi|260078410|gb|EEW66114.1| thymidylate kinase [Enterococcus faecium TC 6]
 gi|289161345|gb|EFD09236.1| thymidylate kinase [Enterococcus faecium D344SRF]
 gi|291589681|gb|EFF21485.1| thymidylate kinase [Enterococcus faecium E1071]
 gi|291591394|gb|EFF23053.1| thymidylate kinase [Enterococcus faecium E1636]
 gi|291596075|gb|EFF27341.1| thymidylate kinase [Enterococcus faecium E1679]
 gi|291598643|gb|EFF29700.1| thymidylate kinase [Enterococcus faecium U0317]
 gi|291606461|gb|EFF35861.1| thymidylate kinase [Enterococcus faecium E1162]
          Length = 214

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 2   NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 62  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R++          +D  + + +  H++ R  +L +A
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P+R H VD+  SF+ V     + + E
Sbjct: 178 EENPERIHKVDARKSFEEVLQTSYHTIIE 206


>gi|56697578|ref|YP_167947.1| thymidylate kinase [Ruegeria pomeroyi DSS-3]
 gi|81558404|sp|Q5LPV9|KTHY_SILPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56679315|gb|AAV95981.1| thymidylate kinase [Ruegeria pomeroyi DSS-3]
          Length = 211

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEGI+G+GK+T   LL   L+   +DV +TREPGG+P AE  R ++L    D +
Sbjct: 4   TGLFLTFEGIDGSGKSTQARLLAETLRAAGHDVVLTREPGGSPGAEEIRRLVLEGDPDRW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  G++++CDRF DS+  YQG         +D L  
Sbjct: 64  SAETEILLFTAARRDHLERTIEPALAAGRVVICDRFADSTRMYQGLSRGDLRQLVDQLHA 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T+++D+  + GL R + R    E      FE     + ++ R  FLD+AR
Sbjct: 124 LMI-GREPDLTLLVDMDPETGLSRAKGRQGSEE-----RFEDFGPELQQRMRAGFLDLAR 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               R  I+D      SVA ++  IV   + +
Sbjct: 178 EYAHRFRIIDGNRDMDSVAADVTEIVLTHLNR 209


>gi|42518522|ref|NP_964452.1| thymidylate kinase [Lactobacillus johnsonii NCC 533]
 gi|59798356|sp|Q74KZ7|KTHY_LACJO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|41582807|gb|AAS08418.1| thymidylate kinase [Lactobacillus johnsonii NCC 533]
          Length = 213

 Score =  252 bits (644), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ + + L +   +   VTREPGG+  +E  R ++L     E
Sbjct: 2   RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG   +     +  + 
Sbjct: 62  MDDRTEALLYAAQRSQHVSEVIRPALATGKVVLSDRFIDSSLAYQGVGRNLGIEEVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD TI LDL   +GL R++       +   D  E++ +  H K    + ++ 
Sbjct: 122 DFGTGGLEPDLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELF 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              PDR   VD+    + VA N + I+ + +
Sbjct: 178 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 208


>gi|325912933|ref|ZP_08175307.1| dTMP kinase [Lactobacillus iners UPII 60-B]
 gi|325477747|gb|EGC80885.1| dTMP kinase [Lactobacillus iners UPII 60-B]
          Length = 213

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E
Sbjct: 2   KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG         +  + 
Sbjct: 62  MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD TI  D+    GL+R+Q      E    D  E+++ + H+K    +  + 
Sbjct: 122 EFATRHITPDLTIFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R   VD+  S   V +  + I+ E +
Sbjct: 178 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 208


>gi|308388855|gb|ADO31175.1| putative thymidylate kinase [Neisseria meningitidis alpha710]
 gi|325129800|gb|EGC52608.1| thymidylate kinase [Neisseria meningitidis OX99.30304]
 gi|325135738|gb|EGC58350.1| thymidylate kinase [Neisseria meningitidis M0579]
 gi|325197890|gb|ADY93346.1| thymidylate kinase [Neisseria meningitidis G2136]
 gi|325202534|gb|ADY97988.1| thymidylate kinase [Neisseria meningitidis M01-240149]
 gi|325207716|gb|ADZ03168.1| thymidylate kinase [Neisseria meningitidis NZ-05/33]
          Length = 206

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 71/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        S   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------SREKDRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  I+DS  S   V  NI  ++
Sbjct: 178 ERYAIIDSNRSLDEVRNNIEKVL 200


>gi|307708576|ref|ZP_07645040.1| thymidylate kinase [Streptococcus mitis NCTC 12261]
 gi|307615325|gb|EFN94534.1| thymidylate kinase [Streptococcus mitis NCTC 12261]
          Length = 212

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLETLLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLNIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+    +      ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +  R   +D++   + V      ++++ +
Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFDRM 208


>gi|170747926|ref|YP_001754186.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831]
 gi|170654448|gb|ACB23503.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831]
          Length = 240

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 85/197 (43%), Positives = 118/197 (59%), Gaps = 2/197 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+FEG EGAGK+T I+ L   L+ +    V VTREPGG+P AE  R  LL      
Sbjct: 13  GGTFITFEGGEGAGKSTQIARLAATLRARSGRPVCVTREPGGSPRAEEIRAALLDGVAKP 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G  AEA++F+AAR+DH++ +IRPAL  G+ +LCDRF+DS+ AYQG         +D+L+
Sbjct: 73  YGPFAEALLFSAARIDHLDRLIRPALRRGETVLCDRFIDSTRAYQGAAGGLDPGIVDALE 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + V    PD T+ILDL  + GL R   R   R     D FE + +  H + R+ FL IA
Sbjct: 133 RVVVGPTRPDLTLILDLAPESGLARAAGRG-ARTGQGADRFEAEALDFHVRLREAFLAIA 191

Query: 182 RNQPDRCHIVDSAHSFQ 198
             +PDRC ++D++    
Sbjct: 192 GAEPDRCAVIDASRDPD 208


>gi|311695098|gb|ADP97971.1| thymidylate kinase [marine bacterium HP15]
          Length = 213

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EG GK+T ++     L     D  VTREPGGTP AEA R +LL+   +  
Sbjct: 4   RGQFITFEGTEGVGKSTQLTNAADTLAGLGVDYIVTREPGGTPMAEAVRELLLAPRDEPV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  H+   I PAL +G+ +LCDRF D+++AYQG         +  L+ 
Sbjct: 64  NEITELLLMFAARAQHLHTRILPALEQGQWVLCDRFTDATFAYQGGGRGVPEERIALLET 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   ++ PD  I+LD PVD G+ R + R        LD FE++D+   ++ R+ +L  A 
Sbjct: 124 LVQGDIRPDHVIVLDAPVDTGMARARKRGD------LDRFEQEDLEFFQRIRETYLARAM 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            QP R H++D+A     V+  +  ++   + +
Sbjct: 178 AQPSRYHVIDAARPLAEVSGQVSELLNHWLSR 209


>gi|288554635|ref|YP_003426570.1| thymidylate kinase [Bacillus pseudofirmus OF4]
 gi|288545795|gb|ADC49678.1| thymidylate kinase [Bacillus pseudofirmus OF4]
          Length = 213

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 124/214 (57%), Gaps = 4/214 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+ EG EGAGKTT +  +++ L+ +N  V  TREPGG   AE  R V+L     
Sbjct: 1   MKTGLFITVEGGEGAGKTTIVDKIEQDLRARNISVVRTREPGGIRIAERIREVILDVDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  EA+++AAAR  H+   + PAL EG +++CDRF+DSS AYQG         + ++
Sbjct: 61  EMDARTEALLYAAARRQHLIEKVLPALEEGNVVICDRFIDSSLAYQGHARGIGFNDVLAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++   PD T+  ++  ++GL R++ R   RE   ++  +++    HEK ++ +  +
Sbjct: 121 NEFAIEGNYPDLTLFFNIEPEVGLARIK-RSGTRE---VNRLDQEVFDFHEKVKEGYEKV 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               PDR  ++++     +V ++ + ++ + ++K
Sbjct: 177 IAQYPDRMAVINADQEVDAVFSDAMAVINDFLKK 210


>gi|254445325|ref|ZP_05058801.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235]
 gi|198259633|gb|EDY83941.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235]
          Length = 214

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61
           +G F +FEG EG+GK+T I LL   L    ++V VTREPGGT   E  RH+L+      +
Sbjct: 8   TGKFFTFEGSEGSGKSTQIELLAEELAGMGHEVVVTREPGGTSIGEEIRHLLIHSSAGKD 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EAE ++FAAAR   V  +I P L +G I+LCDRFLDS+  YQG   S     +  + 
Sbjct: 68  MTPEAELLLFAAARAQLVRELILPELEKGSIVLCDRFLDSTTVYQGAARSIASDPVSYIN 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +V  + P  T ILD+P +  ++RV+ R     S   D  E+++   ++K R  +L +A
Sbjct: 128 QFAVGPLSPTLTFILDVPAEESIRRVKRRV----SDLPDRMEQENNDFYKKVRDGYLLLA 183

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           ++ P+R H+VD   S       IL  V +
Sbjct: 184 KSMPERFHVVDGTRSLAVNREEILKTVLD 212


>gi|309806674|ref|ZP_07700670.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b]
 gi|308166979|gb|EFO69162.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b]
          Length = 213

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R+++L     E
Sbjct: 2   KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG         +  + 
Sbjct: 62  MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  + 
Sbjct: 122 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R   VD+  S   V +  + I+ E +
Sbjct: 178 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 208


>gi|152980260|ref|YP_001353676.1| thymidylate kinase [Janthinobacterium sp. Marseille]
 gi|166221747|sp|A6SZH9|KTHY_JANMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|151280337|gb|ABR88747.1| thymidylate kinase (dTMP kinase) [Janthinobacterium sp. Marseille]
          Length = 204

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEGI+GAGK+TH+S +   L  +   V VTREPGGT   E  R +LL    +
Sbjct: 1   MTTGKFITFEGIDGAGKSTHLSFVAELLCERKKTVVVTREPGGTSLGEELREILLH---E 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         L++L
Sbjct: 58  KMHLETEALLMFAARREHIAQVIAPALERGDWVISDRFTDATFAYQGGGRKLDRAKLNAL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + P  T++ D+P+D+   R+        +  LD FE++        R  +L  
Sbjct: 118 EQWVHPHLQPHLTLLFDVPLDVARARLDA------TRTLDKFEQEKAEFFAATRAEYLRR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R H++DS  S  ++   +  IV
Sbjct: 172 AAEFPQRFHVIDSTRSIAAIQEQLRAIV 199


>gi|254475335|ref|ZP_05088721.1| thymidylate kinase [Ruegeria sp. R11]
 gi|214029578|gb|EEB70413.1| thymidylate kinase [Ruegeria sp. R11]
          Length = 227

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 6/214 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++FEGI+G+GK+T   +L   L+ +  DV +TREPGG+  AE  R ++L    D 
Sbjct: 14  RGGLFVTFEGIDGSGKSTQCRMLADTLRARGLDVVLTREPGGSDGAEEIRRLVLEGDPDR 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + AE E ++F AAR DH+E  I PAL  G++++CDRF DS+  YQG         +D L 
Sbjct: 74  WSAETELLLFTAARRDHLERRILPALAAGQVVVCDRFADSTRMYQGLSRGDLRASVDQLH 133

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD TI++D+    GL R + R    E      FE   + + ++ R  FL +A
Sbjct: 134 RLMIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALA 187

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +   +R  ++D       VA ++L+IV   + + 
Sbjct: 188 QEFANRFRVIDGDRPMDVVAQDVLDIVAAALPEH 221


>gi|88705148|ref|ZP_01102860.1| Thymidylate kinase [Congregibacter litoralis KT71]
 gi|88700843|gb|EAQ97950.1| Thymidylate kinase [Congregibacter litoralis KT71]
          Length = 209

 Score =  251 bits (643), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  +G  GAGKTT I  ++  LQ  N +   TREPGGTP  E  R +LLS    
Sbjct: 1   MKKGRMIVVDGSNGAGKTTVIEAIRDHLQHVNRETVFTREPGGTPIGEKIREILLSPEAG 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++FAAAR  HV   I PA+  GK+++ DRF  ++ ++Q          + +L
Sbjct: 61  EMADVTELMLFAAARAQHVREKIMPAVEAGKVVVSDRFDSATVSFQHYARGLPLELITTL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            EI+V  + PD TIILDL  + GL RV +R        LD  E++ +    K R  +L  
Sbjct: 121 NEIAVDGLKPDMTIILDLDPEAGLVRVGSRGDD-----LDRLEKEKLDFLHKARDGYLGQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A+  PD   ++D++ S  +V + +L++V ++++
Sbjct: 176 AKASPDNFVVIDASQSLDNVISEVLSVVDQVIE 208


>gi|319898926|ref|YP_004159019.1| Thymidylate kinase [Bartonella clarridgeiae 73]
 gi|319402890|emb|CBI76441.1| Thymidylate kinase [Bartonella clarridgeiae 73]
          Length = 210

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT ISLL + L  K YDV +TREPGGT  AEA R++LLS  V ++
Sbjct: 2   SGYFITFEGGEGAGKTTQISLLAQHLGSKGYDVIITREPGGTVGAEAIRYILLSGSVAQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E ++F AAR DHV  +I+P+L  GKI+LCDRF+DS+  YQG  +      L  L+ 
Sbjct: 62  GPFIETVLFTAARADHVAEIIKPSLQAGKIVLCDRFIDSTRVYQGINNKVDTHILSILEY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I ++ + PD T +LD+P   G++R+  R        ++YFE+ D+ I E+RRQ FL++A+
Sbjct: 122 IGMKGIKPDLTFLLDIPAKFGIERINLRRK-----KINYFEKDDLDIQEQRRQAFLELAK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++P R  ++D   + + +A  I +I   ++
Sbjct: 177 HEPHRFQVIDGTCAVEVIADQIKDICHRVI 206


>gi|302379541|ref|ZP_07268026.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3]
 gi|303234538|ref|ZP_07321175.1| dTMP kinase [Finegoldia magna BVS033A4]
 gi|302312448|gb|EFK94444.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3]
 gi|302494372|gb|EFL54141.1| dTMP kinase [Finegoldia magna BVS033A4]
          Length = 203

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 7/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GK+T I  +  +L   NYDV  TREPGG+P AE  R+++L     + G 
Sbjct: 1   MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I PAL E KI+LCDRFL SS AYQG         + ++ E +
Sbjct: 61  RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + PD  +  D+     LKR  +          D  E++    HE+    + +I  ++
Sbjct: 121 INGIFPDFVLFFDVDPITTLKRKSS------LDTADRLEKEGNNFHERVYNGYKEILNSE 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
            +   I+D+  S + V +  + ++  
Sbjct: 175 KN-IEIIDATQSVEDVFSQCIEVLKR 199


>gi|228478159|ref|ZP_04062767.1| thymidylate kinase [Streptococcus salivarius SK126]
 gi|228249838|gb|EEK09108.1| thymidylate kinase [Streptococcus salivarius SK126]
          Length = 209

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKTT +  L   L+      V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTTVLEALLPRLREVYPAQVVTTREPGGVAIAEQIREVILDVNN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L +G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L         PD T++ D+  + GL R+           ++  + + + +H++ RQ +LD
Sbjct: 121 LNAYVTDGYKPDVTLLFDVDSETGLARIAASGE----REVNRLDLEKLDLHQRVRQGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+ +P+R  ++D++ +F+ V      ++   +
Sbjct: 177 LAKAEPERIKLIDASQAFEDVVEQAWKVIEGYL 209


>gi|329666793|gb|AEB92741.1| thymidylate kinase [Lactobacillus johnsonii DPC 6026]
          Length = 213

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+FEG +GAGKTT I+ + + L +   +   VTREPGG+  +E  R ++L     E
Sbjct: 2   RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPKNKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV  VIRPAL  GK++L DRF+DSS AYQG   +     +  + 
Sbjct: 62  MDDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQGVGRNLGVEEVKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + P+ TI LDL   +GL R++       +   D  E++ +  H K    + ++ 
Sbjct: 122 DFGTGGLEPNLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              PDR   VD+    + VA N + I+ + +
Sbjct: 178 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 208


>gi|154248245|ref|YP_001419203.1| dTMP kinase [Xanthobacter autotrophicus Py2]
 gi|154162330|gb|ABS69546.1| dTMP kinase [Xanthobacter autotrophicus Py2]
          Length = 217

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 90/212 (42%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T    L   L+   + V  TREPGG+P AEA RHVLLS   +
Sbjct: 1   MTQGRFITLEGGEGTGKSTQARRLAAHLRTLGHTVVETREPGGSPGAEAVRHVLLSGAAE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G  AEA++FAAAR DHV+ +IRPAL  G I++CDRF+DS+  YQG         LD+L
Sbjct: 61  PLGPVAEALLFAAARTDHVQTLIRPALAAGTIVICDRFIDSTRVYQGAVGQVAPPLLDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E++     PD T+ILD+P + GL R   R +       D FE++    H   R+ F+  
Sbjct: 121 EEMATGGTRPDLTLILDVPPETGLARAAARGN----GDPDRFEKEGAAYHAAVREAFVAR 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P RC +VD+     +VA  I  IV   +
Sbjct: 177 AAAAPARCVLVDATPDPDAVAAQIAGIVAARL 208


>gi|300214869|gb|ADJ79285.1| Thymidylate kinase (dTMP kinase) [Lactobacillus salivarius CECT
           5713]
          Length = 208

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 118/210 (56%), Gaps = 5/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F++FEGI+G+GKT+ +  +   L  K  D    TREPGG   +EA R ++L+    E 
Sbjct: 3   GKFVTFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+ + + PAL EGK++LCDRF+DSS  YQG         +  L E
Sbjct: 63  DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVIKLNE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + + PD T+  D+  +I LKR+ N         +D  +++ +  + K RQ +L +A 
Sbjct: 123 FATENLKPDLTLYYDVEPEISLKRISNN----RQNQVDRLDKESMDFYHKVRQAYLSLAE 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  +R  ++D++ +   V  + L+I+   +
Sbjct: 179 SNKERIKVIDASQNLDKVIDDTLSILNNFM 208


>gi|254517430|ref|ZP_05129486.1| dTMP kinase [Clostridium sp. 7_2_43FAA]
 gi|226911179|gb|EEH96380.1| dTMP kinase [Clostridium sp. 7_2_43FAA]
          Length = 209

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G FI FEG +G+GK+T + ++  +L   N +   TREPGG   +E  R V+L     
Sbjct: 1   MDKGKFIVFEGGDGSGKSTILDMVYDYLIENNIECIKTREPGGIKISEDIREVILDTKNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  +  EA+++AAAR  H+   + P +  G I+LCDRF+ SS AYQG   +     +  +
Sbjct: 61  KMDSRTEALLYAAARRQHLVEKVIPEIDRGAIVLCDRFIYSSLAYQGYARNIGIDEIYQI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +V E MPD  I+ DL  +IGL+R+           ++  + + +  H K R  +L +
Sbjct: 121 NKFAVGEYMPDLNILFDLSPEIGLERINKNKE----REINRLDLEKIDFHNKVRDGYLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                ++   +++  S + V   +  I+ + ++
Sbjct: 177 YEENKEKFVKINAEKSIEEVFNVVKEIITDFIK 209


>gi|59800692|ref|YP_207404.1| thymidylate kinase [Neisseria gonorrhoeae FA 1090]
 gi|194097952|ref|YP_002000998.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945]
 gi|240013551|ref|ZP_04720464.1| thymidylate kinase [Neisseria gonorrhoeae DGI18]
 gi|240015990|ref|ZP_04722530.1| thymidylate kinase [Neisseria gonorrhoeae FA6140]
 gi|240080130|ref|ZP_04724673.1| thymidylate kinase [Neisseria gonorrhoeae FA19]
 gi|240112344|ref|ZP_04726834.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|240115084|ref|ZP_04729146.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|240117368|ref|ZP_04731430.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|240120623|ref|ZP_04733585.1| thymidylate kinase [Neisseria gonorrhoeae PID24-1]
 gi|240122923|ref|ZP_04735879.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|240125177|ref|ZP_04738063.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|240127632|ref|ZP_04740293.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|254493144|ref|ZP_05106315.1| thymidylate kinase [Neisseria gonorrhoeae 1291]
 gi|260441100|ref|ZP_05794916.1| thymidylate kinase [Neisseria gonorrhoeae DGI2]
 gi|268596281|ref|ZP_06130448.1| thymidylate kinase [Neisseria gonorrhoeae FA19]
 gi|268598402|ref|ZP_06132569.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|268600757|ref|ZP_06134924.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|268603063|ref|ZP_06137230.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|268681542|ref|ZP_06148404.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|268683771|ref|ZP_06150633.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|268686011|ref|ZP_06152873.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044433|ref|ZP_06570142.1| thymidylate kinase [Neisseria gonorrhoeae DGI2]
 gi|293399613|ref|ZP_06643766.1| thymidylate kinase [Neisseria gonorrhoeae F62]
 gi|73920825|sp|Q5F9Z5|KTHY_NEIG1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621733|sp|B4RJR3|KTHY_NEIG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59717587|gb|AAW88992.1| putative thymidylate kinase [Neisseria gonorrhoeae FA 1090]
 gi|193933242|gb|ACF29066.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945]
 gi|226512184|gb|EEH61529.1| thymidylate kinase [Neisseria gonorrhoeae 1291]
 gi|268550069|gb|EEZ45088.1| thymidylate kinase [Neisseria gonorrhoeae FA19]
 gi|268582533|gb|EEZ47209.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|268584888|gb|EEZ49564.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|268587194|gb|EEZ51870.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|268621826|gb|EEZ54226.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|268624055|gb|EEZ56455.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|268626295|gb|EEZ58695.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011327|gb|EFE03323.1| thymidylate kinase [Neisseria gonorrhoeae DGI2]
 gi|291610182|gb|EFF39304.1| thymidylate kinase [Neisseria gonorrhoeae F62]
          Length = 206

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 69/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------AREKDRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  S   V  +I  ++
Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200


>gi|313664899|ref|YP_004046770.1| dTMP kinase [Mycoplasma leachii PG50]
 gi|312949571|gb|ADR24167.1| dTMP kinase [Mycoplasma leachii PG50]
          Length = 213

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L         
Sbjct: 1   MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKNMDV 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   +     ++ +Q+I 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  D+      KR+Q R      +  +  + ++    +K  Q +L++ +N 
Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQLRGE----SSKNRLDEEENNFKQKVYQGYLELIKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P+R  ++D+      V    + I+ E +++
Sbjct: 177 PERIKVIDANKDIDQVYNQAIKIILEKLKE 206


>gi|254448227|ref|ZP_05061689.1| thymidylate kinase [gamma proteobacterium HTCC5015]
 gi|198262094|gb|EDY86377.1| thymidylate kinase [gamma proteobacterium HTCC5015]
          Length = 213

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 6/214 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG EG GK+T++  ++++L  +  +V  TREPGGTP  EA R VLL    +  
Sbjct: 2   KGRFITLEGGEGVGKSTNLRYVQQWLTGQGLNVVQTREPGGTPLGEALRGVLLGDQAEGI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA+AE +   AAR +H++ VI PAL  G  +LCDRF D+SYAYQG         + +L+ 
Sbjct: 62  GAKAELLTVFAARQEHLDKVIVPALERGDWVLCDRFTDASYAYQGGGRGLAFDTIAALEN 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++LD P+++G+ R   R         D FER+     E   + +   A 
Sbjct: 122 WVQGDLRPDLTLLLDAPLEVGMARAAER------GQADRFEREPRAFFEAVSEAYRRRAS 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            + +R  ++D+A    SV   I  ++ E +   +
Sbjct: 176 TEAERYAVIDAAQDLASVQAQIDRVLSERLAPWL 209


>gi|78044441|ref|YP_358922.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123577218|sp|Q3AG12|KTHY_CARHZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77996556|gb|ABB15455.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 203

 Score =  251 bits (642), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 9/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG+EG+GKTT I  + R+L  KN    +TREPGGT   +  R +LL+      
Sbjct: 2   RGKFITIEGVEGSGKTTQIQYIARYLTEKNIPHIITREPGGTALGKKIRELLLNPSY-PV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE +++ A R  HV   I P L +G  ++ DR+ DS+ AYQG         L S   
Sbjct: 61  VPEAEILLYLADRAQHVGEKIIPHLDKGVWVISDRYFDSTLAYQGYGRGFDLTLLKSFIA 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + ++PD T+++DLP ++GL RV+ R         D  ER+ +  H++ R+ FL +AR
Sbjct: 121 FATKGLIPDLTVLIDLPPEVGLSRVKGR------GEYDRLERETLEFHQRVREGFLQLAR 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +   R  +VD     + +   I   +  L
Sbjct: 175 D--QRFRVVDGRKKPEEIFWEIKGFLEGL 201


>gi|331703062|ref|YP_004399749.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801617|emb|CBW53770.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 213

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 120/210 (57%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K+ L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTALLKVKKELERLNYQVLITREPGGEAIAEQIRQIILDNKNKDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   +     +  +Q+I 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVSEVQQIV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  D+      KR+Q R      +  +  +++     +K  Q +L++ +N 
Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----SSKNRLDKEKSDFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R  ++D+      V    + I+ E +++
Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKE 206


>gi|302190918|ref|ZP_07267172.1| thymidylate kinase [Lactobacillus iners AB-1]
 gi|309808247|ref|ZP_07702156.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a]
 gi|309810090|ref|ZP_07703936.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D]
 gi|312873623|ref|ZP_07733670.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d]
 gi|312875715|ref|ZP_07735710.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b]
 gi|325911589|ref|ZP_08173997.1| dTMP kinase [Lactobacillus iners UPII 143-D]
 gi|308168535|gb|EFO70644.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a]
 gi|308169589|gb|EFO71636.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D]
 gi|311088707|gb|EFQ47156.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b]
 gi|311090876|gb|EFQ49273.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d]
 gi|325476575|gb|EGC79733.1| dTMP kinase [Lactobacillus iners UPII 143-D]
          Length = 213

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FISFEG +GAGKTT I+ L + L  K    + VTREPGG+  +E  R ++L     E
Sbjct: 2   KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE EA+++AAAR  HV   I PAL  GKI+  DRF+DSS AYQG         +  + 
Sbjct: 62  MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T+  D+    GL+R+Q      E    D  E+++ + H+K    +  + 
Sbjct: 122 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R   VD+  S   V +  + I+ E +
Sbjct: 178 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 208


>gi|192291490|ref|YP_001992095.1| thymidylate kinase [Rhodopseudomonas palustris TIE-1]
 gi|238692602|sp|B3QKH1|KTHY_RHOPT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|192285239|gb|ACF01620.1| dTMP kinase [Rhodopseudomonas palustris TIE-1]
          Length = 230

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 93/211 (44%), Positives = 131/211 (62%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T I LL + L++      VTREPGG+P AEA R  LL+      
Sbjct: 12  RGRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLAGIGKLI 71

Query: 63  G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           G A+AEA++FAAAR DHV  +I PAL  G+ +LCDRF DS+ AYQG+  +     L++LQ
Sbjct: 72  GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++ ++ PD T+ILD+PV+IGL R   R   R S   D FE + +  H   R++F  IA
Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P+RC ++D+    + VA  I   V   +
Sbjct: 189 AQEPERCALIDANAEPEEVADRIWQAVRLRL 219


>gi|120554780|ref|YP_959131.1| dTMP kinase [Marinobacter aquaeolei VT8]
 gi|120324629|gb|ABM18944.1| thymidylate kinase [Marinobacter aquaeolei VT8]
          Length = 214

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T +    + L+R   D  VTREPGGTP AE+ R +LL+   +
Sbjct: 3   LARGRFITFEGTEGVGKSTQLDNAAKTLERLGIDYIVTREPGGTPMAESIRELLLAPREE 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++  AAR  H+ N I PAL  GK +LCDRF D+++AYQG         +  L
Sbjct: 63  SVHETTELLLMFAARAQHLHNRILPALSAGKWVLCDRFTDATFAYQGGGRGVSRERIALL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +   E+ PD  I+LD PV+ G+ R + R        LD FER+     ++ R+ +L+ 
Sbjct: 123 EALVQGEMRPDHVILLDAPVETGMARARKR------GELDRFEREAQAFFQRIRETYLER 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A   P R H+V++A   + V+ ++  ++  L +
Sbjct: 177 ATEMPGRYHVVNAALPLEQVSESVSALLTALAK 209


>gi|46446707|ref|YP_008072.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|59798299|sp|Q6MCA2|KTHY_PARUW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46400348|emb|CAF23797.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 225

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 2/210 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-E 61
            G FI+ EG EG+GK+T ++ L  + + K ++V  TREPGGT   E+ RH+LL+      
Sbjct: 7   KGYFITIEGGEGSGKSTLLNQLGDYFRNKGFEVIQTREPGGTKLGESIRHLLLNHEDSIS 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G +AE ++F AAR  H+E +I+PAL  GKI+LCDRF DS+ AYQG         +    
Sbjct: 67  IGHQAELLLFLAARAQHIEELIQPALKAGKIVLCDRFNDSTIAYQGAARGLNAKKIQEFC 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQIFLDI 180
           ++   E++P+ T+ LD+  +IGL R Q    +      LD  E + +  HE+ RQ FL +
Sbjct: 127 QLVCAEILPNWTLFLDVSPEIGLARTQKIQKVHAQMGQLDRIESEKIEFHERVRQAFLSL 186

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + +P R + +D+  S   V    L  + E
Sbjct: 187 VQQEPQRIYRIDANESQSKVLQKALEFLEE 216


>gi|15612605|ref|NP_240908.1| thymidylate kinase [Bacillus halodurans C-125]
 gi|14285517|sp|Q9KGL9|KTHY_BACHD RecName: Full=Thymidylate kinase
 gi|10172654|dbj|BAB03761.1| thymidylate kinase [Bacillus halodurans C-125]
          Length = 210

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKT+ +  ++  L+     V  TREPGG P AE  R ++L     
Sbjct: 1   MTKGCFITVEGGEGAGKTSALDAIEEMLRENGLSVVRTREPGGIPIAEQIRSIILDVDHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AAAR  H+   + PAL  G ++LCDRF+DSS AYQG         + ++
Sbjct: 61  RMDPRTEALLYAAARRQHLVEKVLPALEAGHVVLCDRFIDSSLAYQGYARGIGFEDILAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++   PD T++  +  D+GL R+ +R   RE    +  +++ +  H+K ++ +  I
Sbjct: 121 NEFAIEGRYPDLTLLFRVDPDVGLSRI-HRDQSREQ---NRLDQEALTFHQKVKEGYERI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   +D+  SF  V  + + ++ + +
Sbjct: 177 VETYPERVVEIDANQSFDQVVADAVRMIKQRL 208


>gi|218532450|ref|YP_002423266.1| dTMP kinase [Methylobacterium chloromethanicum CM4]
 gi|218524753|gb|ACK85338.1| dTMP kinase [Methylobacterium chloromethanicum CM4]
          Length = 244

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 90/199 (45%), Positives = 124/199 (62%), Gaps = 4/199 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG EGAGK+T I+ L   L+R    +V  TREPGGT  AEA R  LL      
Sbjct: 7   RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G  AEA++FAAAR+DH+EN+IRPAL  G I+LCDRF DS+ AYQG         +DSL+
Sbjct: 67  YGPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++ ++ PD T+ILDLP + GL R + R +       D FE + +  HE+ R  F  IA
Sbjct: 127 RVTLVDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIA 183

Query: 182 RNQPDRCHIVDSAHSFQSV 200
             +P+RC ++D+     +V
Sbjct: 184 EAEPERCRVIDADLGPDAV 202


>gi|171780208|ref|ZP_02921112.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281556|gb|EDT46991.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 208

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ I+FEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIITFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKEIIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + S     PD T+  D+  +IGL R+           ++  + + + +H++ RQ +LD+
Sbjct: 121 NDFSTDGRKPDLTLYFDVESEIGLARIAKNAD----REVNRLDLEKLDMHKRVRQGYLDL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A+ + +R   +D++   + V     +++ E +
Sbjct: 177 AQTE-ERIVTIDASRELEQVVAEATHVILEKL 207


>gi|312866475|ref|ZP_07726693.1| dTMP kinase [Streptococcus downei F0415]
 gi|311098169|gb|EFQ56395.1| dTMP kinase [Streptococcus downei F0415]
          Length = 206

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 119/208 (57%), Gaps = 4/208 (1%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ EG +GAGKT+ +  L   L+ + + V  TREPGG   AE+ R V+L         + 
Sbjct: 2   ITLEGPDGAGKTSVLERLVPLLEAQGHQVVTTREPGGVAIAESIREVILDVKNTAMDEKT 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E +++ AAR  H    + P L +GK++L DRF+DSS AYQG         +D L + +++
Sbjct: 62  ELLLYIAARRQHFVEKVLPDLAQGKLVLVDRFIDSSVAYQGYGRGLSVTDIDWLNDYAIE 121

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
           +  PD T++ DLP ++GL R++      E   ++  + + + +H++ RQ +L++A++QP+
Sbjct: 122 DTKPDLTLLFDLPSELGLARIEQ----AEVREVNRLDLEKLDMHQRVRQGYLELAKSQPE 177

Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214
           R  ++D+A   + V  + L+ +   + K
Sbjct: 178 RIKVIDAAQELEKVVADALSTIQLALAK 205


>gi|300114110|ref|YP_003760685.1| thymidylate kinase [Nitrosococcus watsonii C-113]
 gi|299540047|gb|ADJ28364.1| thymidylate kinase [Nitrosococcus watsonii C-113]
          Length = 210

 Score =  251 bits (641), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 119/208 (57%), Gaps = 5/208 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EGIEGAGK+T ++ +++ LQ    +V VTREPGGT   E  R +LLS  ++   A+
Sbjct: 3   FIALEGIEGAGKSTQLTFIQQLLQSAGKNVVVTREPGGTLLGEQIRELLLSPRLESMSAD 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR++HV+ VI PAL  GK +LCDRF  +SYAYQG         + +L+  ++
Sbjct: 63  TELLLMFAARVEHVQQVILPALAAGKWILCDRFTSASYAYQGGGRKLPLSRIATLESWAL 122

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD  ++ D+P  +GL+R   R        LD FE++ +   ++ R  +L +A+  P
Sbjct: 123 NGLRPDLILLFDVPARLGLQRAATRCQ-----QLDRFEQEKIDFFDRVRMTYLSLAKRYP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +  ++DS+     V   I  ++   ++
Sbjct: 178 AQYCLIDSSLPLLKVQEAIQKVMIAFLE 205


>gi|256848132|ref|ZP_05553576.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715192|gb|EEU30169.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN]
          Length = 212

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 120/217 (55%), Gaps = 10/217 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVD 60
            G FISFEG +GAGKT+ IS ++ +L +K     V +TREPGG   +E  R +L      
Sbjct: 2   QGRFISFEGPDGAGKTSVISAIQEWLTQKYGKQAVLLTREPGGNRISEQIRQILFDDHNT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA++FAAAR  H+   I PAL  GK +L DR++DSS AYQG         +  L
Sbjct: 62  NMDARTEALLFAAARRQHIVEDIEPALQAGKFVLSDRYVDSSVAYQGGGRHLGADDIWEL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++  ++PD TI LD+P ++GL+R+           ++  +R+ +  H+  R  +L +
Sbjct: 122 NQFAIHGLLPDLTIYLDIPSELGLERISK----HRQNQVNRLDREKLRFHQDVRNAYLTL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A+    R  ++D++    +V    +N+V E++Q R +
Sbjct: 178 AQRHQKRIQLIDASQPLPTV----INMVQEMIQNRFN 210


>gi|91775853|ref|YP_545609.1| thymidylate kinase [Methylobacillus flagellatus KT]
 gi|123078858|sp|Q1H169|KTHY_METFK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91709840|gb|ABE49768.1| thymidylate kinase [Methylobacillus flagellatus KT]
          Length = 203

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 9/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG++GAGK++HI  +   L+ +  +V  TREPGGTP  E  R +LL    +  
Sbjct: 2   RGRFITLEGMDGAGKSSHIESIVSVLEGRGLEVVSTREPGGTPLGEKLRELLLH---ERM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR +H+  VI PAL  G  ++ DRF D+S+AYQ          +++L+ 
Sbjct: 59  HVETETLLMFAARREHIAEVIEPALARGAWVVSDRFTDASFAYQCGGRGVPCEKVEALEA 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T++ D+PV+I + R+        +   D FER+      + R  +L  A 
Sbjct: 119 WVHPDLQPDLTLLFDVPVEISVARLAA------ARTPDKFERESAEFFRRIRNGYLARAE 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            QP R  ++D      +V   +L+I+ E 
Sbjct: 173 AQPQRFRLIDGNRPMDTVRKEVLDIMREF 201


>gi|169824826|ref|YP_001692437.1| thymidylate kinase [Finegoldia magna ATCC 29328]
 gi|238687760|sp|B0S2F7|KTHY_FINM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|167831631|dbj|BAG08547.1| thymidylate kinase [Finegoldia magna ATCC 29328]
          Length = 203

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 7/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GK+T I  +  +L   NYDV  TREPGG+P AE  R+++L     + G 
Sbjct: 1   MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I PAL E KI+LCDRFL SS AYQG         + ++ E +
Sbjct: 61  RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  V PD  +  D+     LKR  +          D  E++    HE+    + +I  ++
Sbjct: 121 INGVFPDFVLFFDVDPITTLKRKSS------LDTADRLEKEGNNFHERVYNGYKEILNSE 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
            +   I+D+  S + V +  + ++  
Sbjct: 175 KN-IEIIDATQSVEDVFSQCIEVLKR 199


>gi|94987963|ref|YP_596064.1| thymidylate kinase [Streptococcus pyogenes MGAS9429]
 gi|94991847|ref|YP_599946.1| thymidylate kinase [Streptococcus pyogenes MGAS2096]
 gi|94541471|gb|ABF31520.1| thymidylate kinase [Streptococcus pyogenes MGAS9429]
 gi|94545355|gb|ABF35402.1| Thymidylate kinase [Streptococcus pyogenes MGAS2096]
          Length = 237

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 27  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 86

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 87  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 146

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 147 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 202

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 203 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 235


>gi|254479299|ref|ZP_05092640.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
 gi|214034774|gb|EEB75507.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653]
          Length = 208

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT + LL+  L+++ YD+ V REPGGT   E  R +LL    +  
Sbjct: 2   RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLD-RENLI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PAL +G++++ DRF+DSSY YQG         +  + E
Sbjct: 61  FPVTEMLLYASSRAQLVEEKILPALSKGQMVIVDRFVDSSYVYQGYARGLGLEKVKIVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+ + + PD T+ +D+  +  +KR       R+    D  E +D   H+K R+ +L + +
Sbjct: 121 IATKGLFPDITVYIDITPEEAIKR-------RQGKKADRLEGEDYEFHKKVREGYLRLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + P+R  ++D      +V   ++  V E ++
Sbjct: 174 DFPERFVLIDGMQEVLAVHKMVVKAVEEYLK 204


>gi|197119572|ref|YP_002139999.1| thymidylate kinase [Geobacter bemidjiensis Bem]
 gi|229621737|sp|B5E9M9|KTHY_GEOBB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|197088932|gb|ACH40203.1| thymidylate kinase [Geobacter bemidjiensis Bem]
          Length = 225

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 4/217 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT + LLK  L+     V VTREPGG P A+  R +LL        
Sbjct: 2   GFFITFEGIEGCGKTTQLRLLKERLEAAGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV+ VI PAL  G+ +LCDRF D++ AYQG         ++ L  +
Sbjct: 62  PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLTVIEELNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V P  T+++D PV++GL R   R      A  + FER+ ++ H+K R  +L +A  
Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRNGYLTLAAA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
            P+R  +VD +            +V E +++R+  L 
Sbjct: 182 FPERFVVVDGSGDV----RQTGLLVAEALRQRMQSLG 214


>gi|296315027|ref|ZP_06864968.1| dTMP kinase [Neisseria polysaccharea ATCC 43768]
 gi|296838232|gb|EFH22170.1| dTMP kinase [Neisseria polysaccharea ATCC 43768]
          Length = 206

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        S   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------SREKDRFEQEQEDFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  S   V  NI  ++
Sbjct: 178 ERYAVIDSNRSLDEVRNNIERVL 200


>gi|297622813|ref|YP_003704247.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
 gi|297163993|gb|ADI13704.1| thymidylate kinase [Truepera radiovictrix DSM 17093]
          Length = 217

 Score =  251 bits (641), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+FI+FEG EG+GKTT +  L   L+        T+EPGGT   E  R ++L   +  
Sbjct: 7   TRGVFIAFEGPEGSGKTTQLGRLAARLEALGQVPLTTKEPGGTAVGERLRALVLDPAL-R 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E +++AA+R + V +V++PAL  G+++LCDRF  ++ AYQGE       ++  L 
Sbjct: 66  MHPETELLLYAASRAELVASVLKPALAAGRVVLCDRFTGATVAYQGEGRGLPKDWIGVLN 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + P  T++ DLP ++GL RV  R         D  E+     HE+ R+ FL  A
Sbjct: 126 ARVTGGLKPHLTLLFDLPPEVGLARVARR------GARDRLEQAAFAFHERVRRGFLQQA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              P   H++D++   + VA  +  +V  L++ R +
Sbjct: 180 EQDPS-WHVLDASRPEEEVAGAVWRLVAPLLRDRGA 214


>gi|74317561|ref|YP_315301.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259]
 gi|123611774|sp|Q3SIM9|KTHY_THIDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|74057056|gb|AAZ97496.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259]
          Length = 204

 Score =  251 bits (641), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 113/208 (54%), Gaps = 9/208 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+TH+  +  +L+ +  +V VTREPGGT   E  R +LL     E  
Sbjct: 5   GKFITLEGVDGAGKSTHVGFVAEWLRGQGREVIVTREPGGTALGETLRELLLH---REMA 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+ E ++  AAR  H+  +I PAL  G  ++ DRF D+SYAYQ          + +L++ 
Sbjct: 62  ADTELLLMFAARQQHLAELILPALARGAWVVSDRFTDASYAYQCGGRRIAAERIAALEDW 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             +   PD T++ D+P  +  +R   R S+R     D FE++      + R  +L  AR 
Sbjct: 122 VQRGFAPDLTLLFDVPPAVAEER---RSSVR---AADRFEQEAGSFFARVRDAYLVRARA 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +P R H++D+  +  +V   I  ++ +L
Sbjct: 176 EPHRIHVLDARQTIDAVQAEIARLLQDL 203


>gi|322388016|ref|ZP_08061623.1| thymidylate kinase [Streptococcus infantis ATCC 700779]
 gi|321141289|gb|EFX36787.1| thymidylate kinase [Streptococcus infantis ATCC 700779]
          Length = 212

 Score =  251 bits (641), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  +   L+ KN +   TREPGG    E  R V+L     
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDPKTELLLYIASRRQHLVEKVLPALATGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL+R+           ++  + + + +H K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAANSD----REVNRLDLEGLDLHRKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++     V  N   ++++ +
Sbjct: 177 LEKEGERIVKIDASLPLNQVVENTKQVLFDRM 208


>gi|296128436|ref|YP_003635686.1| thymidylate kinase [Cellulomonas flavigena DSM 20109]
 gi|296020251|gb|ADG73487.1| thymidylate kinase [Cellulomonas flavigena DSM 20109]
          Length = 224

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 10/210 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+F+SFEG +G GK+T ++LL   L     +V VTREPGGTP     R  +L    DE 
Sbjct: 15  AGVFVSFEGGDGVGKSTQVALLGHHLAALGREVVVTREPGGTPLGIELRRAVLHG--DEL 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA R  HV +++RPAL  G ++L DR+LDSS AYQG         ++ L  
Sbjct: 73  DPRTEALLYAADRAHHVASLVRPALARGAVVLTDRYLDSSVAYQGSGRGLGADEVERLSL 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +V E++P  T++LDL   +GL R+        +   D  E      H + R+ FL  A 
Sbjct: 133 WAVDELLPHLTVLLDLDPVVGLARL--------TGDPDRLESAGDEFHRRTREAFLARAA 184

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++D++   + VA  +   +  L+
Sbjct: 185 ADPARWLVLDASQPAEDVAAQVRERLAPLL 214


>gi|319404208|emb|CBI77801.1| Thymidylate kinase [Bartonella rochalimae ATCC BAA-1498]
          Length = 217

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 96/214 (44%), Positives = 136/214 (63%), Gaps = 6/214 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT  AEA R++LLS  V ++
Sbjct: 2   SGYFITFEGGEGVGKTTQISLLAQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS----QHLFLD 118
           G   E  +F AAR DHV  +I P+L  GKI+LCDRF+DS+  YQG               
Sbjct: 62  GPFIETFLFTAARADHVSEIIMPSLQAGKIVLCDRFIDSTRVYQGINKGINNRVDAHIFS 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+ I ++ + PD T +LD+P  +G++RV  R    E   +DYFE+ D+ I E+RRQ FL
Sbjct: 122 ILEHIGMKGIKPDLTFLLDIPAKLGIERVNLRRKKIEK--IDYFEKDDLAIQEQRRQAFL 179

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++A+++P R  ++D   + + +A  I +I  +L+
Sbjct: 180 ELAKHEPYRFQVIDGTCAVEVIADQIKDICHQLL 213


>gi|212637874|ref|YP_002314394.1| Thymidylate kinase [Anoxybacillus flavithermus WK1]
 gi|226732650|sp|B7GFF9|KTHY_ANOFW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|212559354|gb|ACJ32409.1| Thymidylate kinase [Anoxybacillus flavithermus WK1]
          Length = 209

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF SFEG EGAGKTT + +LK +L  ++ DV  TREPGG   AE  R V+L    +   A
Sbjct: 4   LFFSFEGPEGAGKTTIVRMLKDYLSEQHVDVVATREPGGIDIAEQIRAVILHPNNERMDA 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AAAR  H+   + PAL +GK++LCDRF+DSS AYQG         + ++   +
Sbjct: 64  RTEALLYAAARRQHLVEKVIPALKDGKVVLCDRFIDSSLAYQGVARGLGIDEILAINAFA 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  MP  TI  D+   +GL R++       S  ++  + +++  HE+ R+ ++ +    
Sbjct: 124 IENWMPILTIYFDIDPSLGLARIRENG----SREVNRLDLEELSFHEQVRKGYMVLLDRF 179

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P+R   VD+      V  ++  ++  L++K
Sbjct: 180 PNRIKKVDATQPITKVFEDVWALIEPLIRK 209


>gi|260905520|ref|ZP_05913842.1| thymidylate kinase [Brevibacterium linens BL2]
          Length = 904

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 8/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG +G+GK+T I  + + L  + Y V  TREPGGT      R VL     +  
Sbjct: 411 AGFFIAIEGGDGSGKSTQIKRVSQILADEGYSVEATREPGGTELGRQIRSVLFDS--EPP 468

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++FAA R  HV +++ P+L  G I++ DR++DS+ AYQ    +     + +L +
Sbjct: 469 SPRTEALLFAADRAHHVASLVDPSLDSGNIVITDRYIDSTIAYQAAGRNFDPKTILALSK 528

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + Q ++P  TI+LD+  ++   R+  R         +Y + ++   H++ RQ +L  A 
Sbjct: 529 WATQGLVPHLTIVLDIDPEVSATRMGKRGEN------NYLDEENQQFHQRVRQTYLTRAH 582

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +PDR  ++D++ S + +   IL  +   + +++
Sbjct: 583 KEPDRYIVLDASVSEEDLTAEILTAIRTRLPRQM 616


>gi|15676568|ref|NP_273712.1| thymidylate kinase [Neisseria meningitidis MC58]
 gi|14285516|sp|Q9K0D9|KTHY_NEIMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|7225896|gb|AAF41088.1| thymidylate kinase [Neisseria meningitidis MC58]
 gi|316983637|gb|EFV62618.1| thymidylate kinase [Neisseria meningitidis H44/76]
 gi|325139881|gb|EGC62412.1| thymidylate kinase [Neisseria meningitidis CU385]
 gi|325200644|gb|ADY96099.1| thymidylate kinase [Neisseria meningitidis H44/76]
          Length = 206

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++LD A   P
Sbjct: 124 GGLKPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  +   V  +I  ++
Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200


>gi|261392957|emb|CAX50542.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis 8013]
 gi|325141921|gb|EGC64362.1| thymidylate kinase [Neisseria meningitidis 961-5945]
          Length = 206

 Score =  250 bits (640), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 69/203 (33%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  I+DS  S   V  +I  ++
Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200


>gi|313900951|ref|ZP_07834441.1| dTMP kinase [Clostridium sp. HGF2]
 gi|312954371|gb|EFR36049.1| dTMP kinase [Clostridium sp. HGF2]
          Length = 210

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 6/216 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLFI+FEG +G+GKTT   L    L+   Y V  TREPGG   AE  R ++L     
Sbjct: 1   MNKGLFITFEGNDGSGKTTISKLAYEKLKEMGYPVLYTREPGGIDIAEQIRSIILDPANT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AA+R  H+   + PAL EGKI+LCDRF+DSS  YQG         + ++
Sbjct: 61  AMDERCEALLYAASRRQHLIEKVLPALKEGKIVLCDRFVDSSLVYQGIARGIGVEEVFAI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +++  +PD T+ L +  + GL RV +R +       D  + + +  H+   Q +  I
Sbjct: 121 NQFAIEGHLPDATVFLSVDFETGLSRVTSRGNK------DRLDNESMEFHKLVAQGYELI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                +R HIVD+     +V  N +  + E+++  V
Sbjct: 175 KDKFKERMHIVDANPDVDTVLNNTVACLMEIIKNHV 210


>gi|156743649|ref|YP_001433778.1| dTMP kinase [Roseiflexus castenholzii DSM 13941]
 gi|189030839|sp|A7NQB4|KTHY_ROSCS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|156234977|gb|ABU59760.1| dTMP kinase [Roseiflexus castenholzii DSM 13941]
          Length = 229

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 7/215 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG EG+GK+T   LL   L  + Y V +TREPGGT   +  R ++L     E   
Sbjct: 3   LFVTFEGPEGSGKSTQARLLYESLYARRYPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+AAR   V  VIRP L +G I+LCDR+ DS+YAYQG         L ++   +
Sbjct: 63  TTETLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTYAYQGYGLGRDLAELRTITAAA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY---SLRESACLD----YFERKDVMIHEKRRQIF 177
              + PD T  LD+  + GL+R + ++    L     +D      + +++  H++    +
Sbjct: 123 TGGLRPDITFYLDISAEDGLERKRRKHPGARLMGQRGVDQEWNRLDARELEYHQRVEAGY 182

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +    P+R  ++D+  S +++A  I  IV   +
Sbjct: 183 RALIAQDPERWRVLDARQSIEALAEQIAAIVEPYL 217


>gi|24380041|ref|NP_721996.1| thymidylate kinase [Streptococcus mutans UA159]
 gi|290579980|ref|YP_003484372.1| putative thymidylate kinase [Streptococcus mutans NN2025]
 gi|46576564|sp|Q8DSU6|KTHY_STRMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|24378032|gb|AAN59302.1|AE014996_5 putative thymidylate kinase [Streptococcus mutans UA159]
 gi|254996879|dbj|BAH87480.1| putative thymidylate kinase [Streptococcus mutans NN2025]
          Length = 212

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 5/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G+FISFEG +GAGKTT +  +   L++    +V  TREPGG   AE+ R ++L    
Sbjct: 1   MTKGIFISFEGPDGAGKTTVLEAILPQLKKLVAKEVITTREPGGVAIAESIRDLILDVNH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   I P L +G ++L DRF+DSS AYQG         +  
Sbjct: 61  TNMDDKTELLLYIAARRQHLVERILPELKKGNLVLVDRFIDSSVAYQGYGRGLDADAVTW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   + PD T+  D+   IGL R++          ++  + + + +H + R  +L 
Sbjct: 121 LNNFATDGLQPDLTLYFDVDSQIGLTRIEKNKE----REVNRLDLEQLDMHRRVRSGYLK 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +A+  PDR   +D+A   + V T+ L I+ +
Sbjct: 177 LAQENPDRIVTIDAARPLEEVITDALFIIKQ 207


>gi|94989835|ref|YP_597935.1| thymidylate kinase [Streptococcus pyogenes MGAS10270]
 gi|94543343|gb|ABF33391.1| Thymidylate kinase [Streptococcus pyogenes MGAS10270]
          Length = 253

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|254415334|ref|ZP_05029095.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420]
 gi|196177809|gb|EDX72812.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420]
          Length = 213

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 17/219 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-----------DVHVTREPGGTPAAEAARHV 53
           + I FEG+EG+GKTT I   + +                  V +TREPGGT      R +
Sbjct: 1   MLIVFEGVEGSGKTTQIQRSRDWFLSSGILDTLGNYHKPPPVIITREPGGTALGIKLRQL 60

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           LL           E +++AA R  HVE +++P L  G I+LCDR+ DS+ AYQG      
Sbjct: 61  LLQEQSSSLQHRTELLLYAADRSQHVEELLQPQLDAGAIILCDRYTDSTIAYQGYGRGID 120

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              ++ +  I+   +  D T+ LD+ V IGL+R + R         D  E+ ++  H++ 
Sbjct: 121 LALIEQINHIATGGLESDLTLWLDVDVTIGLQRARER------GVADRMEQAELTFHQRV 174

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +Q F  +A   P R   +D+  S ++V  +I  ++ + +
Sbjct: 175 QQGFAQLASQHPQRIVRIDANQSPEAVQRDIQAVLRQRI 213


>gi|50902776|gb|AAT86491.1| Thymidylate kinase [Streptococcus pyogenes MGAS10394]
          Length = 253

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|71802080|gb|AAX71433.1| thymidylate kinase [Streptococcus pyogenes MGAS6180]
          Length = 253

 Score =  250 bits (640), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|83954240|ref|ZP_00962960.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1]
 gi|83841277|gb|EAP80447.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1]
          Length = 212

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFISFEGI+G+GK+T   LLK  L+   + V +TREPGG+P AE  R ++L    D +
Sbjct: 6   KGLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSPGAEEIRALVLQGDPDRW 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  E ++F AAR DH+E  I PAL  GKI++CDRF DS+  YQG         +D L  
Sbjct: 66  SARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHS 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +  V PD T+++D+    GL R  +R ++ E      FE     +    R  FL +A 
Sbjct: 126 LMI-GVEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             PDR   ++ A S  +VA +++  V   +  R
Sbjct: 180 EFPDRFVTINGAQSIDAVAADVIAQVRPRLDAR 212


>gi|227533730|ref|ZP_03963779.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227188714|gb|EEI68781.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 238

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 4/211 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI+FEG +GAGKT+ +  L   L++     +H+TREPGG   +E  R V+L    
Sbjct: 24  MVKGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPAN 83

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AA+R  H+  VI+PAL +G I++CDRF+DSS AYQG         +  
Sbjct: 84  TAMDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLK 143

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +   + P  T+ LD+PV +GL R+++  + R+    D  +++ +  HE+    ++ 
Sbjct: 144 MNQFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQY---DRLDQESLAFHERVHDAYMT 200

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  + P R   +D+    + V       +  
Sbjct: 201 LIVDNPQRIVSIDATEPLEKVVAACFQTITR 231


>gi|309792153|ref|ZP_07686625.1| dTMP kinase [Oscillochloris trichoides DG6]
 gi|308225694|gb|EFO79450.1| dTMP kinase [Oscillochloris trichoides DG6]
          Length = 230

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 11/226 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG+GK+T   LL   LQ   Y V +TREPGGT  +E  R +++     E   
Sbjct: 3   LFITFEGSEGSGKSTQARLLYERLQAVGYPVILTREPGGTRISELIRRIVMDLRHTEMAP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+AAR   V  +IRP L  G I+LCDR+ DS++AYQG         L ++  ++
Sbjct: 63  TTETLLFSAARAQLVSELIRPYLGTGGIVLCDRYADSTFAYQGYGLGRDLEELQAITTVA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------DYFERKDVMIHEKRR 174
              + PD T  LDLPV+ GL+R        E              +  + +D+  H++  
Sbjct: 123 TGGLQPDLTFYLDLPVEEGLRRKHLAKERAEQNAPGTTLSTPVEWNRLDARDLAYHQRVA 182

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
             F D+ R +P R  I+ +      +A  I   V  L+ KRV+ L 
Sbjct: 183 AGFADLIRKEPQRWRIIPAEQPIPILAEQIAQEVAPLL-KRVARLG 227


>gi|34499178|ref|NP_903393.1| thymidylate kinase [Chromobacterium violaceum ATCC 12472]
 gi|46576426|sp|Q7NRQ7|KTHY_CHRVO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|34105029|gb|AAQ61385.1| dTMP kinase [Chromobacterium violaceum ATCC 12472]
          Length = 212

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 116/213 (54%), Gaps = 7/213 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EGI+GAGK+TH+S ++ +L R   D   TREPGGTP +E  R +LL  G   
Sbjct: 6   RRGRFITLEGIDGAGKSTHLSFIRDWLARHGVDAAFTREPGGTPLSEKIRDLLLDPGTVA 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AEA++  AAR  H+  VI PAL  G+ L+ DRF DS+YA+QG         + +L+
Sbjct: 66  -SLDAEALLAFAARQQHIAEVIEPALAAGRWLVSDRFTDSTYAFQGGGRGVPFERIRALE 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   + + PD T++ DLP ++   R+        +   D FE++    H + R  +L  A
Sbjct: 125 DWVQRGLQPDLTLLFDLPTEVAAGRMAG------TRVPDRFEQEAADFHRRVRAAYLRRA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P R  ++D++     +  +I+  +  L+++
Sbjct: 179 EEAPQRIAVLDASRGIADIQADIVLHLERLLER 211


>gi|320547322|ref|ZP_08041613.1| dTMP kinase [Streptococcus equinus ATCC 9812]
 gi|320448020|gb|EFW88772.1| dTMP kinase [Streptococcus equinus ATCC 9812]
          Length = 210

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 114/214 (53%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKDSIAKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + S     PD T+  D+  ++GL R+           ++  + + + +H++ RQ +LD+
Sbjct: 121 NDFSTDGREPDLTLYFDVESEVGLDRIAKNAD----REVNRLDLEKLDMHKRVRQGYLDL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A+ + +R   +D++   + V  +   ++ E + K
Sbjct: 177 AQTE-NRIVTIDASRELEQVVADATQVILERLAK 209


>gi|254252184|ref|ZP_04945502.1| Thymidylate kinase [Burkholderia dolosa AUO158]
 gi|124894793|gb|EAY68673.1| Thymidylate kinase [Burkholderia dolosa AUO158]
          Length = 206

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      L++ L      V VTREPGGT   E  R ++L+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLNWFCERLQQKLAAAGRHVVVTREPGGTQLGETLRDIVLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---APDKFESESDAFFARTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFVIVDATQSIAEIRQQLERVLAAL 206


>gi|83319417|ref|YP_424009.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|123536025|sp|Q2STA4|KTHY_MYCCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|83283303|gb|ABC01235.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 213

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 120/210 (57%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   +     +  +Q+I 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVSEVQQIV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  D+      KR+Q R      +  +  ++++    +K  Q +L++ +N 
Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----SSKNRLDKEENNFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R  ++D+      V    + I+ E +++
Sbjct: 177 PKRIKVIDANKDIDQVYNQAIKIILEKLKE 206


>gi|118586633|ref|ZP_01544073.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163]
 gi|118432948|gb|EAV39674.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163]
          Length = 213

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 5/217 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI+ EG +GAGKT+ +  L   L+     ++  TREPGG   +EA R ++L    
Sbjct: 1   MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E     EA++FAAAR  H+   I PAL +GKI+L DRF+DSS AYQG         +  
Sbjct: 61  PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQGGGRELGIEAVSE 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +   + P+ T++LDLP ++G+ R+        S  ++  ++  ++ H+K RQ +L 
Sbjct: 121 INNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQTYLQ 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +A++QP+R  ++D+  S + +A N L ++ E ++  +
Sbjct: 177 LAKDQPNRIKVLDATQSPEKIAINALQLIQESLKGWI 213


>gi|325962187|ref|YP_004240093.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468274|gb|ADX71959.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 231

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 115/211 (54%), Gaps = 5/211 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SGLFI+FEG +GAGK+T  +LL   L+ +   V  TREPGGTP  E  R ++L  G   
Sbjct: 5   RSGLFIAFEGGDGAGKSTQAALLAETLEARGLAVLRTREPGGTPIGEKLRSLVLDHGHGL 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAA+R  H   VIRPAL  G+++L DR++DSS AYQG   +     + SL 
Sbjct: 65  IDAHTEALIFAASRAAHASQVIRPALERGEVVLTDRYIDSSVAYQGAGRALGEDAVRSLN 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   + P  T++LD+   +G  R          A  D  E +    H + R  FLD+A
Sbjct: 125 EWATSGLQPHLTVLLDVDPAVGRSR-----RTAGDAAEDRMESEADEFHARIRDAFLDLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R +P+   ++ + H    +++ IL  V  L+
Sbjct: 180 RRRPESYLVLPAHHPVSELSSRILARVDALL 210


>gi|307709124|ref|ZP_07645583.1| thymidylate kinase [Streptococcus mitis SK564]
 gi|307620070|gb|EFN99187.1| thymidylate kinase [Streptococcus mitis SK564]
          Length = 212

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K  +V  TREPGG    E  R V+L     
Sbjct: 1   MSIGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +R   +D++   + V      ++++ +
Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFDRM 208


>gi|297587209|ref|ZP_06945854.1| thymidylate kinase [Finegoldia magna ATCC 53516]
 gi|297575190|gb|EFH93909.1| thymidylate kinase [Finegoldia magna ATCC 53516]
          Length = 203

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 7/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GK+T I  +  +L   NYDV  TREPGG+P AE  R+++L     + G 
Sbjct: 1   MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENTKMGY 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I PAL E KI+LCDRFL SS AYQG         +  + E +
Sbjct: 61  RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRDLGIENVRKINEFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  V PD  +  D+     LKR  +          D  E++    HE+    + +I  ++
Sbjct: 121 INGVYPDFVLFFDVDPITTLKRKSS------LDTADRLEKEGNNFHERVYNGYKEILNSE 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
            +   I+D+  S + V +  + ++  
Sbjct: 175 KN-IEIIDATQSVEDVFSQCIKVLKR 199


>gi|126736701|ref|ZP_01752440.1| thymidylate kinase [Roseobacter sp. CCS2]
 gi|126713816|gb|EBA10688.1| thymidylate kinase [Roseobacter sp. CCS2]
          Length = 202

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/206 (36%), Positives = 108/206 (52%), Gaps = 6/206 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+FEGI+G+GK+T        L+ +  DV +TREPGG+P AE  R ++L+   D
Sbjct: 1   MNKPRFITFEGIDGSGKSTQSRRFADHLRAQGGDVVLTREPGGSPGAEEIRQLVLTGDPD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +  E E ++F A+R DH+E  I PAL  GK ++ DRF DS+  YQG         +DSL
Sbjct: 61  RWSPETEILLFTASRRDHLEKTIEPALTAGKTVISDRFADSTRVYQGATRGDLRAMVDSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             + +    PD T I+D+     L+R   R S       D FE   +   E  R  FL +
Sbjct: 121 HRLMI-AREPDLTFIIDMDPATALERGLARKS-----GEDRFEDFGLGFQETLRHGFLAL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
           A + P RC ++D   +   +A+ I  
Sbjct: 175 AHDHPKRCVLIDGNRTPDQIASEIAA 200


>gi|42560606|ref|NP_975057.1| thymidylate kinase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|59798304|sp|Q6MUI5|KTHY_MYCMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|42492102|emb|CAE76699.1| THYMIDYLATE KINASE [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320609|gb|ADK69252.1| dTMP kinase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 213

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTTLLKVKEELERLNYQVLITREPGGEAIAEQIRQIILDNKNRDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F A+R  H++ VI+PAL +  I++ DRF+DS+ AYQG   +     ++ +Q+I 
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  D+      KR+Q R         +  + +     +K  Q +L++ +N 
Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----NSKNRLDEEKSDFKQKVYQGYLELVKNN 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R  ++D+      V    + I+ E +++
Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKE 206


>gi|254670330|emb|CBA05726.1| Thymidylate kinase [Neisseria meningitidis alpha153]
          Length = 206

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  I+DS  S   V  +I  ++
Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200


>gi|169351616|ref|ZP_02868554.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552]
 gi|169291838|gb|EDS73971.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552]
          Length = 206

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG +G+GKTT   ++   L  + Y V +TREPGG   AE  R ++L       
Sbjct: 2   RGKFITLEGPDGSGKTTISKIVFDQLMAEGYKVLLTREPGGIDIAEQIRAIILDKKNIAM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   I PAL +G +++CDRF+DSS  YQG   +     +  +  
Sbjct: 62  EARTEALLYAAARRQHLIEKIEPALNDGYLVICDRFIDSSLVYQGVARNIGIDEVYQINL 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ +V PD TI  D+P +IGL+R+   +        D  + +    H+K  + ++ I  
Sbjct: 122 FAIGDVFPDTTIFFDIPYEIGLERINKNH-----RDTDRLDLESNDFHKKVYEGYMSICE 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR   +D++ S   VA+ +++I+ +++
Sbjct: 177 KYADRITKIDASKSIDEVASQVIDIIKKII 206


>gi|13470654|ref|NP_102223.1| thymidylate kinase [Mesorhizobium loti MAFF303099]
 gi|23821805|sp|Q98MV4|KTHY_RHILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|14021396|dbj|BAB48009.1| thymidylate kinase [Mesorhizobium loti MAFF303099]
          Length = 224

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 101/215 (46%), Positives = 136/215 (63%), Gaps = 2/215 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EGAGK+T I  L R +  K YDV +TREPGG+P AEA RHVLLS   +
Sbjct: 1   MARGFFITFEGGEGAGKSTQIERLARKMHAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG + EA++FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+ +L
Sbjct: 61  PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++I++  +MPD T+I D+    GL+R   R      A  D FE++ + IH+ RR  FL I
Sbjct: 121 EQIAINGMMPDMTLIFDIDPAEGLRRATLRRGSD--AGADRFEKETLAIHQARRAAFLAI 178

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A  +P+RC +VD++    +V   +   V+  ++ R
Sbjct: 179 AAAEPERCIVVDASADPNTVEDVVTAAVFAALEAR 213


>gi|227550403|ref|ZP_03980452.1| thymidylate kinase [Enterococcus faecium TX1330]
 gi|257888432|ref|ZP_05668085.1| thymidylate kinase [Enterococcus faecium 1,141,733]
 gi|257897193|ref|ZP_05676846.1| thymidylate kinase [Enterococcus faecium Com12]
 gi|257899191|ref|ZP_05678844.1| thymidylate kinase [Enterococcus faecium Com15]
 gi|293379610|ref|ZP_06625747.1| dTMP kinase [Enterococcus faecium PC4.1]
 gi|293572059|ref|ZP_06683070.1| thymidylate kinase [Enterococcus faecium E980]
 gi|227180462|gb|EEI61434.1| thymidylate kinase [Enterococcus faecium TX1330]
 gi|257824486|gb|EEV51418.1| thymidylate kinase [Enterococcus faecium 1,141,733]
 gi|257833758|gb|EEV60179.1| thymidylate kinase [Enterococcus faecium Com12]
 gi|257837103|gb|EEV62177.1| thymidylate kinase [Enterococcus faecium Com15]
 gi|291607844|gb|EFF37155.1| thymidylate kinase [Enterococcus faecium E980]
 gi|292641759|gb|EFF59932.1| dTMP kinase [Enterococcus faecium PC4.1]
          Length = 214

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 2   NGLFITIEGPDGAGKTSILNELFPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 62  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R++          +D  + + +  H++ R  +L +A
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P+R H VD+  SF+ V     + + E
Sbjct: 178 EENPERIHKVDARKSFEEVLQTSYHTIIE 206


>gi|94993722|ref|YP_601820.1| thymidylate kinase [Streptococcus pyogenes MGAS10750]
 gi|94547230|gb|ABF37276.1| Thymidylate kinase [Streptococcus pyogenes MGAS10750]
          Length = 253

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 43  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGRLVFIDRFIDSSVAYQGAGRGLIKADIQW 162

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251


>gi|293550622|ref|ZP_06673290.1| thymidylate kinase [Enterococcus faecium E1039]
 gi|291603243|gb|EFF33427.1| thymidylate kinase [Enterococcus faecium E1039]
          Length = 214

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ ++ L   L+     ++  TREPGG P AE  R V+L    D 
Sbjct: 2   NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GKI+LCDRF+DSS AYQG         +  L 
Sbjct: 62  MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R++          +D  + + +  H++ R  +L +A
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P+R H VD+   F+ V     + + E
Sbjct: 178 EENPERIHKVDARKGFEEVLQTSYHTIIE 206


>gi|294791185|ref|ZP_06756342.1| dTMP kinase [Scardovia inopinata F0304]
 gi|294457656|gb|EFG26010.1| dTMP kinase [Scardovia inopinata F0304]
          Length = 216

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 10/212 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEG++G GKTT  + LK +L  +   V +TREPGGT   E  R +LL    +   
Sbjct: 13  GLFVTFEGVDGVGKTTQATRLKNYLIHQGRQVLITREPGGTHLGEQIRQLLLHGDDEA-- 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AA+R   V   IRPAL  GK+++ DR++DSS AYQ          +  L E 
Sbjct: 71  PRTEALLYAASRAQLVFQEIRPALNMGKVVISDRYIDSSLAYQAGGRELTMEQIRQLNEW 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + P  T +LD+  +    R+        S   D  E        + RQ FLD+A  
Sbjct: 131 ATNGLWPQRTYLLDMDFEQAQARL--------SGPKDRLESSGADFFNRTRQAFLDLAGQ 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +PDR  I++++ S   V   +   +  L+ +R
Sbjct: 183 EPDRFVILNASLSVDQVWDAVKADIDSLLARR 214


>gi|220906428|ref|YP_002481739.1| dTMP kinase [Cyanothece sp. PCC 7425]
 gi|254808287|sp|B8HXT9|KTHY_CYAP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219863039|gb|ACL43378.1| dTMP kinase [Cyanothece sp. PCC 7425]
          Length = 234

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 15/224 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-------------YDVHVTREPGGTPAAEA 49
            G  I FEG EG+GKTT +   +++L+                  + VTREPGGT     
Sbjct: 2   KGKLIVFEGGEGSGKTTQLQRSRQWLESSGWLARLQQTLPTLAKPLLVTREPGGTALGIK 61

Query: 50  ARHVLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
            R +LL+   ++   +  E ++FAA R  HV   ++P L  G ++LCDRF DS+ AYQG 
Sbjct: 62  LRQLLLNSDPEDVIQSRTELLLFAADRAQHVATRLQPHLEAGGLILCDRFTDSTVAYQGY 121

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
                   +D L +I+   +  D T+ LDL V++GL+R + R   +    LD  ER ++ 
Sbjct: 122 GRGLSLALIDQLNQIATDGLTSDLTLWLDLDVEMGLERSRQRLQ-QSGGGLDRIERGEIA 180

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            H++ +Q F  +++  P+R   +D++     VA  I  I+ E +
Sbjct: 181 FHQRVQQGFRALSQAAPERIVTIDASQPEAMVADKIQRILEEKL 224


>gi|121594087|ref|YP_985983.1| thymidylate kinase [Acidovorax sp. JS42]
 gi|171769451|sp|A1W6N2|KTHY_ACISJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120606167|gb|ABM41907.1| thymidylate kinase [Acidovorax sp. JS42]
          Length = 217

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/216 (35%), Positives = 115/216 (53%), Gaps = 17/216 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEGI+GAGK++HI  L + L+   + V +TREPGGTP AE  R +LL    D
Sbjct: 1   MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVALTREPGGTPLAEKLREMLLH---D 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA++  AAR DH+  VI PAL  G+++LCDRF D+++AYQG         L  +
Sbjct: 58  SMDALTEALLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117

Query: 121 QEISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + ++   V         PD T+  D+P ++  +R+        +   D FE + V    +
Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQRLSA------ARAPDRFESQPVEFFTR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + + D A   P R   +DS+   + VA  +  +V
Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207


>gi|28811733|dbj|BAC64665.1| putative thymidylate kinase [Streptococcus pyogenes SSI-1]
          Length = 232

 Score =  249 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 22  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 81

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 82  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 197

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230


>gi|228476228|ref|ZP_04060931.1| dTMP kinase [Staphylococcus hominis SK119]
 gi|228269713|gb|EEK11212.1| dTMP kinase [Staphylococcus hominis SK119]
          Length = 205

 Score =  249 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT ++ + + L  +NY+V  TREPGG    E  R++LL    +     
Sbjct: 4   FITFEGPEGSGKTTVLNQINKLL-SENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   K++LCDR++DSS AYQG         +  + E ++
Sbjct: 61  TEALLFAASRREHLVEKVIPALKNNKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++ +  H+K  + +  + +  P
Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R  +VD+  S +SV +N   I+   ++
Sbjct: 176 ERFKVVDATQSIESVISNTYEIILSYLK 203


>gi|306827929|ref|ZP_07461196.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782]
 gi|304429848|gb|EFM32890.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782]
          Length = 232

 Score =  249 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 22  MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 81

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 82  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 197

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230


>gi|148244374|ref|YP_001219068.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA]
 gi|166223127|sp|A5CXH6|KTHY_VESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146326201|dbj|BAF61344.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA]
          Length = 205

 Score =  249 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ +G+EGAGK+T I  +  +L +KN +V +TREPGGT   E  R +LLS    
Sbjct: 1   MQRGKFITIDGVEGAGKSTQIDFICSYLAKKNINVVLTREPGGTKLGEKIRALLLSIDTQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++  AAR +H++  I PAL  G  +L DRF D+SYAYQG         +  L
Sbjct: 61  LMDNDTELLLIFAARNEHIKTKIIPALNRGDWVLSDRFTDASYAYQGGGRGLSIERIALL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  +Q+  PD T++LD+PV +G+ R+++R         D  E +      + R  ++  
Sbjct: 121 EQWVLQDFSPDVTLLLDVPVALGMLRIKSRSRK------DRIELETNDFFNRVRDSYIKR 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++  P+R  ++D++ + +     I  I+  L
Sbjct: 175 SKQFPERIKLIDASQTLKETTQQIKVILQAL 205


>gi|239998426|ref|ZP_04718350.1| thymidylate kinase [Neisseria gonorrhoeae 35/02]
 gi|268594287|ref|ZP_06128454.1| thymidylate kinase [Neisseria gonorrhoeae 35/02]
 gi|268547676|gb|EEZ43094.1| thymidylate kinase [Neisseria gonorrhoeae 35/02]
 gi|317163711|gb|ADV07252.1| thymidylate kinase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 206

 Score =  249 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+G GK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGVGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------AREKDRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  S   V  +I  ++
Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200


>gi|167747824|ref|ZP_02419951.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662]
 gi|317473408|ref|ZP_07932702.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
 gi|167653186|gb|EDR97315.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662]
 gi|316899058|gb|EFV21078.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA]
          Length = 216

 Score =  249 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 6/211 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EG +GAGK+T I LL+ +L +K YD+ V REPGGT  +EA R V+L+      G
Sbjct: 7   GIFITMEGPDGAGKSTQIDLLRVYLLQKGYDIIVCREPGGTVISEAIREVILNRDYKNMG 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++AAAR   VE VI+PAL +GK+++CDRF++SS  YQG         +  +   
Sbjct: 67  HMTELLLYAAARAQLVEEVIQPALDQGKVVICDRFIESSAVYQGIARGLGVDLVYEVNRF 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V   MPD T++LD+  + G+ R +        A LD  E + +  H K  + +  +A  
Sbjct: 127 AVGNTMPDITLLLDVDAETGIGRKKQ------QAELDRMESEKLEFHRKVVEGYRLLAER 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +R   +D  +S + +   I   V + + +
Sbjct: 181 DKNRMVKIDGRNSIEEIHRQIKVAVDDALTR 211


>gi|116491390|ref|YP_810934.1| thymidylate kinase [Oenococcus oeni PSU-1]
 gi|290890956|ref|ZP_06554020.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429]
 gi|122276428|sp|Q04E53|KTHY_OENOB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116092115|gb|ABJ57269.1| thymidylate kinase [Oenococcus oeni PSU-1]
 gi|290479355|gb|EFD88015.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429]
          Length = 213

 Score =  249 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 5/217 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI+ EG +GAGKT+ +  L   L+     ++  TREPGG   +EA R ++L    
Sbjct: 1   MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E     EA++FAAAR  H+   I PAL +GKI+L DRF+DSS AYQG         +  
Sbjct: 61  PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQGGGRELGIEAVGE 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +   + P+ T++LDLP ++G+ R+        S  ++  ++  ++ H+K RQ +L 
Sbjct: 121 INNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQTYLQ 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +A++QP+R  ++D+  S + +A N L ++ E ++  +
Sbjct: 177 LAKDQPNRIKVLDATQSPEKIAINALQLIQESLKGWI 213


>gi|148255489|ref|YP_001240074.1| thymidylate kinase [Bradyrhizobium sp. BTAi1]
 gi|166221722|sp|A5EJ24|KTHY_BRASB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146407662|gb|ABQ36168.1| thymidylate kinase [Bradyrhizobium sp. BTAi1]
          Length = 226

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 89/210 (42%), Positives = 129/210 (61%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F++FEG EGAGK+T I +L   L+ +   V +TREPGG+P AE  RH++LS      
Sbjct: 12  RGRFVTFEGGEGAGKSTQIKMLAARLESEGMRVVLTREPGGSPGAEIMRHLVLSGMGKLL 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GAEAE ++FAAAR DHV NVI PAL +G  +LCDRF DS+ AYQG         L+++Q 
Sbjct: 72  GAEAETLLFAAARDDHVRNVILPALSQGSWVLCDRFFDSTRAYQGSLGKVAPDVLNAMQR 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++ ++ PD T+ILD+PV++GLK      + R +   D FE +D+  H+  R  F  IA 
Sbjct: 132 VTIGDLKPDLTLILDVPVEVGLK---RAAARRGAGAPDRFEAEDIKFHKGLRDAFHKIAD 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + P RC ++D+      V+  + + V E +
Sbjct: 189 DDPKRCVLIDATAGPDPVSLLVWDAVRERL 218


>gi|223939277|ref|ZP_03631158.1| dTMP kinase [bacterium Ellin514]
 gi|223892109|gb|EEF58589.1| dTMP kinase [bacterium Ellin514]
          Length = 213

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 114/213 (53%), Gaps = 2/213 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GV 59
           M  GL ISFEG EG GK+T ISLL   L+   + + + REPGGTP  E  R+ L      
Sbjct: 1   MKKGLLISFEGTEGCGKSTQISLLTERLRALGHVIRMVREPGGTPIGEEIRYTLKHSVKN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +EAE ++  A+R   V  V+RPAL  G+I++CDR+ DS+ AYQG         + +
Sbjct: 61  HAMTSEAELLLMNASRAQLVREVLRPALEAGEIIVCDRYYDSTTAYQGYGRGLDLKLVQA 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +V +  PD T++L +P ++   R+ +R +       D  E  D     +  Q +  
Sbjct: 121 VIDFAVGDTRPDLTLLLRVPPEVSAARLASRQATLPFIR-DRIEEADQSFFNRVSQGYEA 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A   P+R   +D++ S Q+V+ +I + V  L+
Sbjct: 180 LATAHPERIQTIDASSSVQNVSDSIWSRVKPLL 212


>gi|222111179|ref|YP_002553443.1| thymidylate kinase [Acidovorax ebreus TPSY]
 gi|221730623|gb|ACM33443.1| thymidylate kinase [Acidovorax ebreus TPSY]
          Length = 217

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 17/216 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+FEGI+GAGK++HI  L + L+   + V +TREPGGTP AE  R +LL    D
Sbjct: 1   MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVTLTREPGGTPLAEKLREMLLH---D 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E ++  AAR DH+  VI PAL  G+++LCDRF D+++AYQG         L  +
Sbjct: 58  SMDALTETLLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117

Query: 121 QEISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + ++   V         PD T+  D+P ++  +R+        +   D FE + V    +
Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQRLSA------ARAPDRFESQPVEFFTR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + + D A   P R   +DS+   + VA  +  +V
Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207


>gi|163746821|ref|ZP_02154178.1| thymidylate kinase [Oceanibulbus indolifex HEL-45]
 gi|161379935|gb|EDQ04347.1| thymidylate kinase [Oceanibulbus indolifex HEL-45]
          Length = 214

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 6/211 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SGLF++FEGI+G+GK+T   LL   L  + +DV +TREPGG+P AE  R ++L    D 
Sbjct: 9   RSGLFVTFEGIDGSGKSTQARLLADHLTAQGHDVVLTREPGGSPGAEEIRALVLQGDPDR 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + A+ E ++F AAR DH+E  IRPAL  GKI++CDRF DS+  YQG         +D L 
Sbjct: 69  WSAQTEILLFTAARRDHLERTIRPALDAGKIVICDRFADSTRMYQGLSRGDLRQMVDDLH 128

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  V PD T+++D+    GL+R  +R +  E      FE   V +  + R  FL++A
Sbjct: 129 ALMI-GVEPDLTVLIDMDPANGLERALSRQTAEE-----RFEDFGVELQAQMRAGFLNLA 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +   DR H++D      +VA ++   V   +
Sbjct: 183 KEFSDRFHVIDGGREIDTVARDVTATVAARL 213


>gi|56808246|ref|ZP_00366017.1| COG0125: Thymidylate kinase [Streptococcus pyogenes M49 591]
 gi|209558885|ref|YP_002285357.1| thymidylate kinase [Streptococcus pyogenes NZ131]
 gi|229621844|sp|B5XK00|KTHY_STRPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|209540086|gb|ACI60662.1| Thymidylate kinase [Streptococcus pyogenes NZ131]
          Length = 211

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLTKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREINRLDLETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|298491750|ref|YP_003721927.1| thymidylate kinase ['Nostoc azollae' 0708]
 gi|298233668|gb|ADI64804.1| thymidylate kinase ['Nostoc azollae' 0708]
          Length = 209

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDE 61
           SG  I FEG+EG GKTT + L  ++L+  +    +T EPGGT      R +LL +     
Sbjct: 2   SGKLIVFEGVEGCGKTTQMHLCSQWLRDLSVSFSLTCEPGGTELGTHLRQLLLENSEDKP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E +++ A R  H+E  ++P L +GK +LCDR+ DS+ AYQG         ++ L 
Sbjct: 62  ISEITELLLYGADRAQHIEQELKPNLADGKYILCDRYTDSTIAYQGYGRGLSMSIINQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+   +  D TI LD+ V++GL R       R+ A LD  E++ +  H + +Q + ++A
Sbjct: 122 YIATGGLESDLTIWLDIDVEVGLARK------RDQATLDRIEQETIAFHRRVQQGYTELA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R   VD + S ++V   I  I+   +
Sbjct: 176 ATHPSRIFRVDGSLSKETVQQRIQEILNAHL 206


>gi|209517025|ref|ZP_03265873.1| dTMP kinase [Burkholderia sp. H160]
 gi|209502556|gb|EEA02564.1| dTMP kinase [Burkholderia sp. H160]
          Length = 206

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+   +  L+ K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRAVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DLP  +  +R         +   D FE +     E+ R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDLPPAVANERRSA------ARNPDRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++  A   P R  I+DS+ S   +   +  ++
Sbjct: 172 YMRRAEEAPHRFAIIDSSQSIARIQKQLDELI 203


>gi|319936704|ref|ZP_08011117.1| thymidylate kinase [Coprobacillus sp. 29_1]
 gi|319808261|gb|EFW04826.1| thymidylate kinase [Coprobacillus sp. 29_1]
          Length = 207

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EG+GKTT  +++K  L ++ Y V +TREPGG   AE  R ++        
Sbjct: 2   SGKFITFEGGEGSGKTTIAAMVKEVLDKEGYRVTLTREPGGVEIAEKIRDIIHDVKYTNM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + EA+++AA+R  H+   + PAL +G+I++CDRF+DSS  YQG         + ++  
Sbjct: 62  DRKTEALLYAASRRQHLVEKVIPALEKGEIVICDRFVDSSMVYQGLARGIGIDEVYNMNL 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + ++P+ T+  D+  ++GL+RV           ++  + +++  HE+  + +L I  
Sbjct: 122 FATENILPNRTVFFDIKPEVGLQRVYANKE----REVNRLDLENIDFHERVYEGYLTICN 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P+R   VD++   + V   +L  + E++
Sbjct: 178 RFPERIVKVDASQDIEDVLFQVLEKIREIL 207


>gi|328956615|ref|YP_004374001.1| thymidylate kinase [Carnobacterium sp. 17-4]
 gi|328672939|gb|AEB28985.1| thymidylate kinase [Carnobacterium sp. 17-4]
          Length = 211

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+ EG +GAGKT+ I  L   L +    D+  TREPGG+  AE  R ++L+    E
Sbjct: 2   KGTFITIEGPDGAGKTSVIKKLIPMLVKAVQQDIVATREPGGSRIAEEIRELILNPTNTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  H+   I PAL  GK+++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDIRTEALLYAAGRRQHLVEKIIPALKAGKVVVCDRFVDSSLAYQGVARGIGISEVAEIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + + + + PD T+ LD+    GL+R+      +E+   D  +++ +  HEK R  +L IA
Sbjct: 122 QFATENLSPDLTLYLDIEAHAGLERIN---LNKENRQFDRLDQETLEFHEKVRSAYLKIA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               +R   +D++   ++V      ++ E ++
Sbjct: 179 NEHTERIVQIDASQDLETVVEQCYQVIIEKLR 210


>gi|298369193|ref|ZP_06980511.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283196|gb|EFI24683.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 211

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 8/209 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ +GI+GAGK+T+++++K++ + +   V  TREPGGTP  EA R +LL+    
Sbjct: 1   MNP-RFITLDGIDGAGKSTNLAVMKQWFEARRLPVLFTREPGGTPTGEALREILLNPETK 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   E ++  AAR  H+E+VI PAL  G  ++ DRF D+++AYQG         +++L
Sbjct: 60  A-GLRTETLLMFAARQQHLEDVILPALKNGIHVVSDRFTDATFAYQGGGRGVPLQDIETL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD T++LD+P+++ L+R+            D FER+      + R  +   
Sbjct: 119 ENWVQGSFRPDLTLLLDVPLEVSLERIG------RVREKDRFEREQADFFTRVRNAYFSR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           A   P+R  ++D   S ++V T+I   + 
Sbjct: 173 AAANPERYAVIDGNRSPEAVRTSIEAALE 201


>gi|288958657|ref|YP_003448998.1| dTMP kinase [Azospirillum sp. B510]
 gi|288910965|dbj|BAI72454.1| dTMP kinase [Azospirillum sp. B510]
          Length = 229

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 120/214 (56%), Gaps = 9/214 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLK----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            G  I+ EG EGAGK+T +  L       L+ +   +  TREPGG+P AE  R +L++  
Sbjct: 10  RGRLITLEGGEGAGKSTQLRRLAGRLRETLRARGAGLVTTREPGGSPGAEEIRALLVTGE 69

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              +    EA++ +AAR DH+E  + PAL  G  +LCDRFLDS+ AYQG         ++
Sbjct: 70  TGRWSPVTEALLHSAARRDHLERTVWPALETGDWVLCDRFLDSTMAYQGYGLGLGRALVE 129

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++Q  ++ +  PD T+ILD+ V+ GL+R   R+        D +ER D+  H++ R  FL
Sbjct: 130 TVQRAALGDFRPDLTLILDIEVEKGLRRAVARH-----GGEDRYERMDIGFHQRLRDGFL 184

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           DIAR +PDRC +VD+     +V   + + V   +
Sbjct: 185 DIARREPDRCAVVDADADPDTVQARVWDAVSGRL 218


>gi|256826256|ref|YP_003150216.1| thymidylate kinase [Kytococcus sedentarius DSM 20547]
 gi|256689649|gb|ACV07451.1| thymidylate kinase [Kytococcus sedentarius DSM 20547]
          Length = 213

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 12/212 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           GLF++ EG +GAGK+T I LL   L  Q    +V VTREPGGT      R +LL    D 
Sbjct: 7   GLFVALEGGDGAGKSTQIRLLVEHLAGQHAGREVVVTREPGGTDLGRRIRELLLHG--DH 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA++FAA R  HVE+++RPAL  G +++ DR++DSS AYQG       + + S+ 
Sbjct: 65  VAPRAEALLFAADRAHHVESLVRPALDRGAVVVGDRYVDSSIAYQGAGRDLDAVEVASIS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + ++PD T++LD+    G  R          A  D  E +    HE+ RQ FLD+A
Sbjct: 125 RWATEGLVPDLTVLLDVDPATGRSR--------RGAEHDRLEAEPTAFHERVRQHFLDLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              P R  ++D++   Q +   +   V  L++
Sbjct: 177 AAAPQRYLVLDASRPPQELGAEVARAVDGLLE 208


>gi|254804548|ref|YP_003082769.1| Thymidylate kinase [Neisseria meningitidis alpha14]
 gi|254668090|emb|CBA04608.1| Thymidylate kinase [Neisseria meningitidis alpha14]
 gi|325127822|gb|EGC50730.1| thymidylate kinase [Neisseria meningitidis N1568]
          Length = 206

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/203 (33%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  +   V  +I  ++
Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200


>gi|50085662|ref|YP_047172.1| thymidylate kinase [Acinetobacter sp. ADP1]
 gi|59798252|sp|Q6F9B5|KTHY_ACIAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49531638|emb|CAG69350.1| thymidylate kinase [Acinetobacter sp. ADP1]
          Length = 202

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  L    +     V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKLYEHFEASGKQVVLTREPGGTPLAEQIRSLLLAVNHDEPMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           ++ E ++  AAR  H++ VI PAL + K++L DRF D+SYAYQ          L++L + 
Sbjct: 61  SDTELLLMYAARAQHLQQVIVPALADEKLVLSDRFTDASYAYQCVGRGLSKDKLNTLNQT 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T  LD P+++G+ R + R        LD FE++ V   ++ RQ +  +   
Sbjct: 121 FV-SHMPDITFWLDAPIELGMSRARER------GALDRFEQEKVEFFQRVRQGYQQLHEL 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+R   +D+  + + V    L  +  LV
Sbjct: 174 YPERIKRLDATQAPEIVFQEALEHIQALV 202


>gi|20806623|ref|NP_621794.1| thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
 gi|23821773|sp|Q8RDE6|KTHY_THETN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|20515069|gb|AAM23398.1| Thymidylate kinase [Thermoanaerobacter tengcongensis MB4]
          Length = 208

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G GKTT + LL+  L+++ YD+ V REPGGT   E  R +LL    +  
Sbjct: 2   RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLD-RENLI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++A++R   VE  I PAL +G++++ DRF+DSSY YQG         +  + E
Sbjct: 61  FPVTEMLLYASSRAQLVEEKILPALSKGQMVIVDRFIDSSYVYQGYARGLGLEKVKIVNE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+ + + PD T+ +D+  +  +KR       R+    D  E +D   H+K R+ +L + +
Sbjct: 121 IATKGLFPDITVYIDITPEEAIKR-------RQGKKADRLEGEDYEFHKKVREGYLRLVK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + P+R  ++D      +V   ++  V E ++
Sbjct: 174 DFPERFILIDGMQEVLAVHKMVVKAVEEYLK 204


>gi|238027001|ref|YP_002911232.1| thymidylate kinase [Burkholderia glumae BGR1]
 gi|237876195|gb|ACR28528.1| Thymidylate kinase [Burkholderia glumae BGR1]
          Length = 206

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++     L+ K       V  TREPGGT   EA R +LL 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFCEHLRAKIAPAGRQVVQTREPGGTVLGEALRALLL- 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 60  --EQPMDLETEALLMFAGRREHLARVIEPALTRGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+P ++  +R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPEVASER---RGAVR---APDKFESESEAFFLRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFLIVDATQSIPQIQRQLEGVLAAL 206


>gi|307706440|ref|ZP_07643249.1| thymidylate kinase [Streptococcus mitis SK321]
 gi|307618150|gb|EFN97308.1| thymidylate kinase [Streptococcus mitis SK321]
          Length = 212

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  +S EG EGAGKT+ +  L   L+ K   V  TREPGG    E  R V+L+    
Sbjct: 1   MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVVVLRTREPGGVLIGEKIREVILNPSHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E +++ A+R  H+   + PAL  GK+++ DRF+DSS AYQG         +D L
Sbjct: 61  QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  D+ V+ GL R+           ++  + + + +H+K RQ +L +
Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +  R   +D++   + V      ++++ +
Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFDRM 208


>gi|186475808|ref|YP_001857278.1| thymidylate kinase [Burkholderia phymatum STM815]
 gi|229487611|sp|B2JGP7|KTHY_BURP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|184192267|gb|ACC70232.1| dTMP kinase [Burkholderia phymatum STM815]
          Length = 206

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+   +  L++K       V +TREPGGT   E+ R +LL 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLGWFRDRLEQKVAPAGRSVVMTREPGGTKLGESLRDILLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              +    E EA++  AAR +H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  ---EAMDLETEALLMFAARREHLAQVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+P D   +R         +   D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPDTASERRSA------ARAPDRFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  I+DS  S   +   + +++  L
Sbjct: 172 YLRRAEEAPYRFAIIDSTRSIADIQKQLEDLIASL 206


>gi|237746052|ref|ZP_04576532.1| thymidylate kinase [Oxalobacter formigenes HOxBLS]
 gi|229377403|gb|EEO27494.1| thymidylate kinase [Oxalobacter formigenes HOxBLS]
          Length = 210

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+GAGK+THI  +   L+ KN  V +TREPGGT   E  R +LL    D+  
Sbjct: 11  GRFITFEGIDGAGKSTHIDYVTGLLKAKNRQVVLTREPGGTGLGEKLREILLH---DKMT 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E EA++  AAR +H+ ++I PAL  G+ +L DRF D+S+AYQG         L  L+  
Sbjct: 68  PETEALLMFAARREHLADIIEPALRRGEWVLSDRFTDASFAYQGGGRGLAREKLRQLETW 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD T + D+  DI   R++       +   D FER+      + R  +L  A+ 
Sbjct: 128 VHPHLQPDLTFLFDVSPDIAQTRLEA------ARSPDKFEREKADFFNRVRGEYLRRAKE 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
            P+R  I+DS+    ++   +  ++ +L
Sbjct: 182 FPERFRIIDSSRPIAAIRETLKTLIGKL 209


>gi|322372419|ref|ZP_08046955.1| dTMP kinase [Streptococcus sp. C150]
 gi|321277461|gb|EFX54530.1| dTMP kinase [Streptococcus sp. C150]
          Length = 209

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL IS EG +GAGKT+ +  L   L+      V  TREPGG   AE  R V+L    
Sbjct: 1   MSKGLLISIEGPDGAGKTSVLEALLPRLKEVYPGQVITTREPGGVAIAEQIREVILDVDN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A+ E +++ AAR  H+   + P L +G +++ DRF+DSS AYQG         +  
Sbjct: 61  TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGAGRGLDQTEIAW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +     PD T++ D+  + GLKR+           ++  + + + +H++ R+ +LD
Sbjct: 121 LNAYATDGHKPDVTLLFDVDSETGLKRIAANGE----REVNRLDLEKLDMHQRVRKGYLD 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A  +P+R  ++D++  F  V  +   I+   +
Sbjct: 177 LAMVEPERIKLIDASQPFDKVIEDAWQIIKSYL 209


>gi|99078562|ref|YP_611820.1| thymidylate kinase [Ruegeria sp. TM1040]
 gi|99035700|gb|ABF62558.1| thymidylate kinase [Ruegeria sp. TM1040]
          Length = 214

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 6/214 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGLF++FEGI+G+GK++   LL   L+    +V +TREPGG+  AE  R ++L    D +
Sbjct: 7   SGLFLTFEGIDGSGKSSQCRLLAEHLRGLGREVVLTREPGGSEGAEEIRRLVLEGDPDRW 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  
Sbjct: 67  SAETEILLFTAARRDHLERTILPALSAGKVVICDRFADSTRMYQGLSRGDLRATVDELHA 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD TI++D+  + GL R + R    E      FE   + + EK R  FL +A 
Sbjct: 127 LMIGR-EPDVTILIDMDPETGLARAKGRQGTEE-----RFEDFGLALQEKMRAGFLALAD 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              DR  IVD A    +VA ++  IV   +++RV
Sbjct: 181 EFADRFRIVDGARDMDAVAADVARIVEAELEQRV 214


>gi|253699689|ref|YP_003020878.1| thymidylate kinase [Geobacter sp. M21]
 gi|259494271|sp|C6E2H4|KTHY_GEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|251774539|gb|ACT17120.1| thymidylate kinase [Geobacter sp. M21]
          Length = 225

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 82/217 (37%), Positives = 118/217 (54%), Gaps = 4/217 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIEG GKTT + LLK  L      V VTREPGG P A+  R +LL        
Sbjct: 2   GFFITFEGIEGCGKTTQLRLLKERLVALGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV+ VI PAL  G+ +LCDRF D++ AYQG         ++ L  +
Sbjct: 62  PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLSVIEELNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V P  T+++D PV++GL R   R      A  + FER+ ++ H+K R  +L +A  
Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRDGYLALAAA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
            P+R  +VD +            +V E +++R+  L 
Sbjct: 182 FPERFVVVDGSGDV----QQTGLLVEEALRRRMQSLG 214


>gi|288941602|ref|YP_003443842.1| thymidylate kinase [Allochromatium vinosum DSM 180]
 gi|288896974|gb|ADC62810.1| thymidylate kinase [Allochromatium vinosum DSM 180]
          Length = 215

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 115/209 (55%), Gaps = 5/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EGIEGAGK+T I+ L   L+ +  +V  TREPGG+  AE  R +LL        
Sbjct: 5   GRFITLEGIEGAGKSTQIAPLAELLRARGLNVLTTREPGGSALAERLRALLLDPDNQGMS 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR DH++  IRPAL  G  +LCDRF D++YAYQG         +  L+++
Sbjct: 65  ETTELLLMFAARADHLDRCIRPALAAGGWVLCDRFTDATYAYQGGGRGIDPARIALLEDL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              ++ PD T++ DLP ++GL R ++R     +   D FE +     E  R ++L+ AR 
Sbjct: 125 VQGDLRPDLTLVFDLPPELGLGRAKSR-----AGQTDRFESETRRFFETARAVYLERARA 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+R  ++D+  S ++V   +   +   V
Sbjct: 180 NPERYRVIDATASLEAVTRAVAAELNAFV 208


>gi|302336221|ref|YP_003801428.1| thymidylate kinase [Olsenella uli DSM 7084]
 gi|301320061|gb|ADK68548.1| thymidylate kinase [Olsenella uli DSM 7084]
          Length = 231

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 7/212 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  ++ EGI+G GK+T  +LL   L+   ++V   REPGGT  +E  R +LL    DE
Sbjct: 27  RRGRLVTLEGIDGCGKSTQAALLADHLEASGHEVVCLREPGGTAVSEKIRQLLLDPVNDE 86

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E +++ A+R   V  VI PAL  G +++CDR+ DS+YAYQ          ++   
Sbjct: 87  MADECELLLYEASRAQLVRQVIEPALERGAVVVCDRYFDSTYAYQHGGRGLDRTLVERCN 146

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E+      PD T++ DL   +   R             D  E   +   E+ R  +LD+A
Sbjct: 147 ELGSCGRRPDVTLVFDLDPTVAFARATQ-------GGRDRLEGAGLRFQERVRASYLDLA 199

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             +P R  ++D+  S   V    L ++ ++++
Sbjct: 200 AKEPARVRVIDATGSADEVGRRALLVLADVLR 231


>gi|315499862|ref|YP_004088665.1| thymidylate kinase [Asticcacaulis excentricus CB 48]
 gi|315417874|gb|ADU14514.1| thymidylate kinase [Asticcacaulis excentricus CB 48]
          Length = 212

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 5/206 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG EGAGK+T +  L   L+    +V  TREPGG+  AEA R +L++     +
Sbjct: 2   TGRFITFEGGEGAGKSTQVKALVAHLRELALEVVQTREPGGSSGAEALRDLLVTGEAGRW 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  AAR +H+E VIRPAL  G  ++CDRF DS+ AYQG         ++S+  
Sbjct: 62  SPMSETLMMYAARANHLEQVIRPALERGAWIVCDRFSDSTRAYQGAGGGVTPELIESIDA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V +  PD  I++D+P + GLKR   R         + FE K +  HE+ R+ F   A 
Sbjct: 122 AVVADTQPDLVIVMDMPPEAGLKRALARGDAE-----NRFESKGLAFHERLREGFRRRAA 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P+R  ++D+  S + +  ++  +V
Sbjct: 177 AHPERYRLIDADRSIEDIKADVWRVV 202


>gi|23097491|ref|NP_690957.1| thymidylate kinase [Oceanobacillus iheyensis HTE831]
 gi|46576586|sp|Q8EU53|KTHY_OCEIH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|22775714|dbj|BAC11992.1| thymidylate kinase [Oceanobacillus iheyensis HTE831]
          Length = 225

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 4/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+FEG EGAGKTT I  + + L  +  DV  TREPGG   +E  R ++      E 
Sbjct: 2   AGLFITFEGGEGAGKTTVIQHIFQKLIAQGIDVIQTREPGGIKISEKIRSIIHDPEHLEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AAAR  H+   + PAL +GK++LCDRF+DSS AYQG         + ++  
Sbjct: 62  EERTEALLYAAARRQHLVEKVFPALEQGKVVLCDRFVDSSLAYQGYARGLGIDEVYAINH 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +Q+ MPD T+  D+    GL+R+    +       +  + +++  HE   + +  +  
Sbjct: 122 FVIQDCMPDLTLFFDIEPKKGLERIAANKNRER----NRLDLENMQFHEAVYEGYQKVIA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P+R   + +  + ++V  + + I+   + ++
Sbjct: 178 RFPERIKTIQAEQALEAVEQDTMEIISSFLNEK 210


>gi|325203757|gb|ADY99210.1| thymidylate kinase [Neisseria meningitidis M01-240355]
          Length = 206

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  E  R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS  +   V  +I  ++
Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200


>gi|254512028|ref|ZP_05124095.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11]
 gi|221535739|gb|EEE38727.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11]
          Length = 203

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 6/209 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEGI+G+GK+T   LL   L+R+ ++V +TREPGG+  AE  R+++L    D + A
Sbjct: 1   MFLTFEGIDGSGKSTQARLLAEHLRREGHEVILTREPGGSDGAEEIRNLVLQGDPDRWSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  + 
Sbjct: 61  ETEILLFTAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRGLVDQLHNLM 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    PD T+++D+    GL R + R    E      FE   + + ++ R  FL +A+  
Sbjct: 121 I-GREPDLTLLIDMDPGTGLSRAKGRQGAEE-----RFEDFGLDLQQQMRAGFLALAQEF 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            DR  +VD   +  SVA ++  +V   ++
Sbjct: 175 SDRFRVVDGNRNMDSVAQDVTKVVMMALR 203


>gi|229816418|ref|ZP_04446719.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
           13280]
 gi|229807960|gb|EEP43761.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM
           13280]
          Length = 226

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 6/210 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+ EGI+G GK+T   L+   L+   +DV   REPGG   +E  R +LL     E
Sbjct: 3   SRGLFITVEGIDGCGKSTQARLIAAALEAAGHDVLRLREPGGVKISEQIREILLDPANVE 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   E +++ AAR   V  VIRPAL  GK ++CDRF DS+ AYQ   D      +    
Sbjct: 63  MGDVCELLLYEAARAQLVHQVIRPALAAGKTVVCDRFYDSTTAYQAFADGLDRNMVSQAN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E++V    PD T++ DLPV+  L+R   R         D  E K +   E+    F  +A
Sbjct: 123 ELAVDGCRPDLTLVFDLPVEDALRRRSGR------EAEDRLELKGLEFQERVAAGFRAVA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            ++PDR  ++D+  S   V + +   +   
Sbjct: 177 VDEPDRVKLIDAGGSIAEVFSGVAAELRSA 206


>gi|295395540|ref|ZP_06805734.1| integral membrane protein with kinase activity [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971559|gb|EFG47440.1| integral membrane protein with kinase activity [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 824

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 118/212 (55%), Gaps = 9/212 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD 60
           ++GLFI+ EG +GAGKTT I  L   L+ + +D V  TREPGGTP  ++ R VLL    +
Sbjct: 472 STGLFIAIEGGDGAGKTTQIRKLVEHLESRGFDPVIATREPGGTPVGKSIRSVLLDG--E 529

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               ++EA+++AA R  HV  ++ P+L +   ++ DR++DSS AYQ          + +L
Sbjct: 530 AVSKKSEALLYAADRAHHVATLVAPSLEQDGAVVTDRYIDSSLAYQAGGRELSEDDVLAL 589

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   ++P+ T++LD+   +  +R+ NR         ++ +++ +   ++ R  FL +
Sbjct: 590 SRWATSGLVPNLTLVLDIDPRVAAERMGNREDA------NHLDKQSLEFKDRVRAGFLRL 643

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +PDR  ++ +  S   VA +I  +V  ++
Sbjct: 644 AEAEPDRYAVIPAGRSVNEVAEHIQRVVDAII 675


>gi|314937311|ref|ZP_07844653.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80]
 gi|313654607|gb|EFS18357.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80]
          Length = 205

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT ++ + + L  +NY+V  TREPGG    E  R++LL    +     
Sbjct: 4   FITFEGPEGSGKTTVLNQINKLL-SENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   K++LCDR++DSS AYQG         +  + E ++
Sbjct: 61  TEALLFAASRREHLVEKVIPALKNDKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++ +  H+K  + +  + +  P
Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R  +VD+  S +SV ++   I+   ++
Sbjct: 176 ERFKVVDATQSIESVISDTYEIILSYLK 203


>gi|159897030|ref|YP_001543277.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779]
 gi|229621739|sp|A9AV71|KTHY_HERA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|159890069|gb|ABX03149.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 236

 Score =  248 bits (635), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 77/227 (33%), Positives = 116/227 (51%), Gaps = 19/227 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG+GK+T    LK +LQ+  Y V +TREPGGTP ++A R ++L         
Sbjct: 3   LFITFEGPEGSGKSTQARYLKDYLQQAGYPVILTREPGGTPISDAVRRLVLDGQWTAMEP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++FAAAR   V  VI P L  G I+LCDR+ DS++A+QG         L  +   +
Sbjct: 63  TTETLLFAAARAQLVGEVILPYLKLGGIVLCDRYADSTFAHQGYGLGRNLTELREITRFA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACL------------------DYFERK 165
              + PD T  LDLPV+ GL+R +  R   RES+ L                  +  + +
Sbjct: 123 TGGLQPDLTFFLDLPVEQGLQRKRKQRDDFRESSQLALPLPHLPQPSPSQNEHWNRLDAR 182

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++  HE+ R  +L++    P R  + D+    +S+   +L  V   +
Sbjct: 183 EIAYHERVRSGYLEMIAADPQRWQVFDAGIERESLTEQLLLAVQPHL 229


>gi|188996346|ref|YP_001930597.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229621845|sp|B2V7X0|KTHY_SULSY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|188931413|gb|ACD66043.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 204

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 8/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIE +GKTT I+LL  +L+    +V  TREPGGT   +  R +LLS   ++F 
Sbjct: 2   GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ + R  H++++++P+L  G I+L DR++DS+ AYQ       +  +  L  +
Sbjct: 62  YIAELLLYESDRNIHIQSIVKPSLDAGYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + P+ T ++D+PV+I LKR+        S   D  E +D+  H+K R+ FL IA N
Sbjct: 122 ATDGLKPNLTFLIDIPVEISLKRL--------SESKDRIESEDIEFHKKLREGFLKIAEN 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  R  ++D       +   I++ + +
Sbjct: 174 EKGRFVVIDGTMDIMEIHKIIVDSLKQ 200


>gi|1246361|gb|AAA93511.1| thymidine:thymidylate kinase:zeocin resistance fusion protein
           [Cloning vector pZEO-SG3]
          Length = 560

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 11/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M    +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 215 MARSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 274

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 275 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 334

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 335 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 388

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 389 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 425


>gi|1246364|gb|AAA93513.1| thymidylate:zeocin resistance protein:NDP kinase fusion protein
           [Cloning vector pZEO-SG4]
          Length = 494

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 11/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M    +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MARSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 61  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 121 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 175 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 211


>gi|260426355|ref|ZP_05780334.1| thymidylate kinase [Citreicella sp. SE45]
 gi|260420847|gb|EEX14098.1| thymidylate kinase [Citreicella sp. SE45]
          Length = 208

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFISFEGI+G+GK+T   LL   L+   ++V +TREPGG+P AE  R ++L    D +
Sbjct: 5   TGLFISFEGIDGSGKSTQARLLAEQLRGDGHEVVLTREPGGSPGAEEIRALVLQGDPDRW 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I+PAL  G  ++CDRF DS+  YQG         +D+L E
Sbjct: 65  SAETELLLFTAARRDHLERTIQPALARGATVICDRFADSTRMYQGLSRGDLRAAVDALHE 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  V PD TI++D+     L R + R +  E      FE   + + EK R  FL +A 
Sbjct: 125 RMI-GVEPDLTILIDMDPAAALPRAKARATAEE-----RFEDFGLPLQEKMRAGFLALAA 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
             PDR  I+D   + ++VA ++   + 
Sbjct: 179 EFPDRFRIIDGNRAPEAVARDVRAALQ 205


>gi|86136161|ref|ZP_01054740.1| thymidylate kinase [Roseobacter sp. MED193]
 gi|85827035|gb|EAQ47231.1| thymidylate kinase [Roseobacter sp. MED193]
          Length = 218

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 115/215 (53%), Gaps = 6/215 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++FEGI+G+GK+T    L   L+   YDV +TREPGG+  AE  R ++L    D++
Sbjct: 6   TGLFLTFEGIDGSGKSTQCKRLAETLRLAGYDVVLTREPGGSEGAEEIRRMVLEGDPDKW 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  
Sbjct: 66  SAETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRTTVDQLHT 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T+++D+    GL R + R    E      FE   + + EK R  FL +A 
Sbjct: 126 LMIGR-EPDLTLLIDMDPATGLSRAKGRQGTEE-----RFEDFGLGLQEKMRAGFLSLAE 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
               R  +VD A    +VA ++L      +  R  
Sbjct: 180 EFSTRFRVVDGAQDIDTVAADVLRHTKLALASRTG 214


>gi|261364212|ref|ZP_05977095.1| dTMP kinase [Neisseria mucosa ATCC 25996]
 gi|288567825|gb|EFC89385.1| dTMP kinase [Neisseria mucosa ATCC 25996]
          Length = 208

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+ +GI+GAGK+T++++++++ +  +  V  TREPGGTP  EA R +LL+      
Sbjct: 2   KPKFITLDGIDGAGKSTNLAVIRQWFESHHLPVLFTREPGGTPVGEALREILLNPETKA- 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AE ++  AAR  H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+ 
Sbjct: 61  GLRAETLMMFAARQQHLEDVILPALADGVHVVSDRFTDATFAYQGGGRGVPLQDIEMLEN 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD T++LD+P+++ + R+        +   D FE++      + R ++L+ A 
Sbjct: 121 WVQGGFGPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFTRVRAVYLERAA 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P+R  ++DS  S + V  +I   +
Sbjct: 175 AHPERYALIDSNRSLEEVRADIEYAL 200


>gi|32034665|ref|ZP_00134803.1| COG0125: Thymidylate kinase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126209279|ref|YP_001054504.1| thymidylate kinase [Actinobacillus pleuropneumoniae L20]
 gi|165977254|ref|YP_001652847.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|190151172|ref|YP_001969697.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|303252694|ref|ZP_07338856.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|307246746|ref|ZP_07528815.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307248888|ref|ZP_07530899.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|307255731|ref|ZP_07537534.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307257916|ref|ZP_07539670.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|307260183|ref|ZP_07541892.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|307262310|ref|ZP_07543958.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|307264521|ref|ZP_07546105.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|229487547|sp|A3N3B3|KTHY_ACTP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687523|sp|B0BSY9|KTHY_ACTPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238692362|sp|B3GZ69|KTHY_ACTP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|126098071|gb|ABN74899.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
 gi|165877355|gb|ABY70403.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|189916303|gb|ACE62555.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|302648433|gb|EFL78627.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|306852352|gb|EFM84588.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306854583|gb|EFM86775.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|306861291|gb|EFM93282.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306863563|gb|EFM95492.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306865728|gb|EFM97607.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|306867973|gb|EFM99801.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306870120|gb|EFN01880.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 208

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  EG+EGAGKTT   ++   L++   +V  TREPGGTP AE  RH++     +  
Sbjct: 2   RGKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQTREPGGTPLAEKLRHLIKHETEEAV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQG         L++L+E
Sbjct: 62  SDKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHLLETLKE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD TI LD+   +GL R + R        LD  E++ +    + RQ +L++ +
Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGR------GELDRIEQQSLDFFYRTRQRYLELTQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           N  ++  I+++  S + VA +I   V   ++
Sbjct: 176 NN-EKAVIINAEQSIEQVAADIQQAVENFLK 205


>gi|87199958|ref|YP_497215.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444]
 gi|87135639|gb|ABD26381.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444]
          Length = 209

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G F++FEG EG GK+T   LL   L+ +  +V  TREPGGT  AEA R +LLS   +
Sbjct: 1   MSRGRFVAFEGGEGVGKSTQGRLLAESLRARGLEVVTTREPGGTAGAEAIRTMLLSTEGE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +GA AEA++FAAAR DHVE +IRP++  G  ++CDRF+DSS AYQG         +  L
Sbjct: 61  GWGARAEALLFAAARADHVEKLIRPSVARGAWVVCDRFVDSSRAYQGGGSGLSDADVMQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    ++PD TI+L +  +I   R+  R    +    D    +    H +    F   
Sbjct: 121 HRIGSAGLLPDVTILLTVRPEISAARLAMR----DGNAADRIGGRGEEYHGRVAAAFRRF 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +PDR  +VD+  S + V   +   + + +
Sbjct: 177 AEQEPDRFAVVDAEGSPEEVHARVTAAIDKAL 208


>gi|330817241|ref|YP_004360946.1| Thymidylate kinase [Burkholderia gladioli BSR3]
 gi|327369634|gb|AEA60990.1| Thymidylate kinase [Burkholderia gladioli BSR3]
          Length = 206

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++     L+ +       V  TREPGGT   E+ R VLL 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFCEQLRAQVAASGRQVVQTREPGGTTLGESLRAVLL- 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A+R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 60  --EQAMDLETEALLMFASRREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD TI+ D+P ++  +R         +   D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTILFDVPPEVASERRGA------ARAPDKFEAESDAFFLRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD++ S   +   +  ++  L
Sbjct: 172 YLRRAEEAPYRFLIVDASQSIAQIQRQLEGVLASL 206


>gi|323526017|ref|YP_004228170.1| thymidylate kinase [Burkholderia sp. CCGE1001]
 gi|323383019|gb|ADX55110.1| thymidylate kinase [Burkholderia sp. CCGE1001]
          Length = 206

 Score =  248 bits (634), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R         +   D FE +     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  I+DS+ S   +   +  ++  L
Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIARIQKQLEELIVNL 206


>gi|150015005|ref|YP_001307259.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052]
 gi|189028831|sp|A6LPM3|KTHY_CLOB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|149901470|gb|ABR32303.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052]
          Length = 213

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI FEG EG GKTT I  +  ++   N++   TREPGG   +E  R V+LS    
Sbjct: 1   MKKGLFIVFEGGEGTGKTTAIDAIYDWITENNFECIKTREPGGIKISEQIRQVILSKDNK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A+ EA+++AAAR  H+   + PAL +G I+LCDRF+DSS AYQG   +     + S+
Sbjct: 61  EMDAKTEALLYAAARRQHLVEKVIPALNQGVIVLCDRFIDSSLAYQGYARNLGIEEVLSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++ E MPD +++ DL   IGL R+ N     +   ++  + + +  HE+ R+ +  +
Sbjct: 121 NKFAIGEYMPDISVLFDLDPKIGLARIANN----DCREVNRLDIEKLEFHERVREGYDIV 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +N   R   +D+ ++ ++V   I NI+   +
Sbjct: 177 YKNNNHRIVKIDANNTKENVINQIKNILRPKI 208


>gi|325978913|ref|YP_004288629.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|325178841|emb|CBZ48885.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 210

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +     PD T+  D+  +IGL R+           ++  + + + +H++ R+ +L +
Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVREGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A  +  R   +D++     V +  L I+ E + K+
Sbjct: 177 AEQEK-RIVTIDASRELADVVSETLQIILEQLAKK 210


>gi|116493219|ref|YP_804954.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745]
 gi|122265317|sp|Q03E60|KTHY_PEDPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116103369|gb|ABJ68512.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745]
          Length = 209

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN G FISFEG +GAGKTT +  +    Q++  D + VTREPGG P +EA R ++L    
Sbjct: 1   MN-GHFISFEGPDGAGKTTVLQAMVEHYQQRLKDQLTVTREPGGNPISEAIRTIILDKNN 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E     EA+++AAAR  H+   I PAL +  ++ CDRF+DSS AYQG         +  
Sbjct: 60  TEMDERTEALLYAAARRQHLVETILPALKKNHVVFCDRFVDSSIAYQGAGRKIGTDAVYQ 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   + +  +P+ TI LD+P ++GLKR+        +  +D  + + +  H++ R  +LD
Sbjct: 120 MNLFATEGALPEKTIYLDVPSELGLKRIM----THRTEDVDRLDLEQLDFHQRVRSAYLD 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+  PDR  ++D++     V  +++ ++ +++ 
Sbjct: 176 LAKKFPDRIVVIDASQELDDVKRDVIEVLDQILN 209


>gi|323359121|ref|YP_004225517.1| thymidylate kinase [Microbacterium testaceum StLB037]
 gi|323275492|dbj|BAJ75637.1| thymidylate kinase [Microbacterium testaceum StLB037]
          Length = 224

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEG +GAGKTT  +LL+ +L+    +V  TREPGGT      R ++L    D   
Sbjct: 21  GLFVTFEGGDGAGKTTQAALLEAWLRENGREVVRTREPGGTEVGVLVRDIVLHHRGD-IA 79

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  H+E V+RPA+  G +++ DR+LDSS AYQG         +  L   
Sbjct: 80  PRAEALLYAADRAHHIETVVRPAISRGDVVIQDRYLDSSVAYQGAGRVLDADDIRDLSLW 139

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD T++LDL       R+       +    D  E +    H + R  FL +A  
Sbjct: 140 ATGGLLPDLTVLLDLDPAAARSRLDA-----DEKPFDRLEAEKGEFHTRVRDGFLALAAA 194

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P+R  ++D+      +A  +   V   +
Sbjct: 195 EPERFIVLDARQPVPELADRVREAVASRL 223


>gi|319408563|emb|CBI82216.1| Thymidylate kinase [Bartonella schoenbuchensis R1]
          Length = 214

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 102/210 (48%), Positives = 142/210 (67%), Gaps = 2/210 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+FEG EGAGKTT ISLL ++L+ KNYDV +TREPGGT  AEA R+VLLS   +++
Sbjct: 2   SGYFITFEGGEGAGKTTQISLLAQYLRSKNYDVVITREPGGTAGAEAMRYVLLSGNTEQY 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA  EA++F AAR+DHV  VI P+L  GKI+LCDRF+DS   YQG  +      L  L  
Sbjct: 62  GAFIEAVLFTAARVDHVSEVILPSLQAGKIILCDRFIDSMRVYQGLNNKVNSHLLSVLGR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I +  VMP+ T +LD+P   G++R   R   +E   +DYFE+  + I E+RRQ FL +AR
Sbjct: 122 IGLGTVMPNLTFLLDIPATFGMERTDLR--RKEIGKIDYFEKDQLNIQEQRRQAFLQLAR 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           N+P R  ++D+  + +++A+ I +I  +L+
Sbjct: 180 NEPFRFRVIDATCAVETIASQIKDICHQLI 209


>gi|295676547|ref|YP_003605071.1| thymidylate kinase [Burkholderia sp. CCGE1002]
 gi|295436390|gb|ADG15560.1| thymidylate kinase [Burkholderia sp. CCGE1002]
          Length = 206

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+   +  L+ K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+ +VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---QMDLETEALLMFALRRQHLADVIEPALTRGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DLP  +  +R         +   D FE +     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLPPAVANERRSA------ARNPDRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++  A   P R  I+DS+ S   +   +  ++  L
Sbjct: 172 YMRRAEEAPYRFAIIDSSQSVARIQKQLEELIATL 206


>gi|126668139|ref|ZP_01739101.1| thymidylate kinase [Marinobacter sp. ELB17]
 gi|126627409|gb|EAZ98044.1| thymidylate kinase [Marinobacter sp. ELB17]
          Length = 209

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEG EG GK+T ++     L+    +V VTREPGGTP AEA R +LL+   + 
Sbjct: 3   QRGRFITFEGTEGMGKSTQLATAAASLRAVGINVLVTREPGGTPMAEAIRELLLAPRDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E ++  AAR  H+   I PAL  G+ +LCDRF D+++AYQG    +    +  L+
Sbjct: 63  VHELTELLLMFAARAQHLHTRILPALTAGQWVLCDRFTDATFAYQGGGRGTPAERIGLLE 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +   E+ PD  ++LD PV+ G+ R + R        LD FE++ V    + R  +L  A
Sbjct: 123 TLVQGELRPDHIVLLDAPVETGMARARKR------GELDRFEQETVEFFARIRATYLQRA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R+ P R HIVD+      V+ ++  +  E+V
Sbjct: 177 RHDPQRYHIVDAGQPLARVSADVKRLFQEIV 207


>gi|21909825|ref|NP_664093.1| thymidylate kinase [Streptococcus pyogenes MGAS315]
 gi|161486344|ref|NP_802832.2| thymidylate kinase [Streptococcus pyogenes SSI-1]
 gi|25453083|sp|Q8K8H4|KTHY_STRP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21904011|gb|AAM78896.1| putative thymidylate kinase [Streptococcus pyogenes MGAS315]
          Length = 211

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 209


>gi|237808932|ref|YP_002893372.1| thymidylate kinase [Tolumonas auensis DSM 9187]
 gi|237501193|gb|ACQ93786.1| thymidylate kinase [Tolumonas auensis DSM 9187]
          Length = 209

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FI  EG+EGAGK+T +S +  +L++     +  TREPGGTP AE  R ++     + 
Sbjct: 2   SGKFIVIEGLEGAGKSTAVSYVLDWLRQHGITRIETTREPGGTPLAEKMRSIVKEVHDEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VEN I+PAL  G  ++ DR   SS AYQG       + +  ++
Sbjct: 62  LTVQAELLLMYAARVQLVENRIKPALQSGYWVVGDRHDLSSQAYQGGGRGIDPVLISQIK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+   IGL R + R        LD  E++ +   ++ R  +L++A
Sbjct: 122 QAVLGDFAPDLTLYLDIDPAIGLHRARQR------GELDRIEQEALAFFQRTRARYLELA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R  P R  I+D++ + + V   I   + + +
Sbjct: 176 RQDP-RISIIDASQTPEQVQAAINAALEQAL 205


>gi|162139412|ref|YP_279788.2| thymidylate kinase [Streptococcus pyogenes MGAS6180]
          Length = 211

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|121634466|ref|YP_974711.1| thymidylate kinase [Neisseria meningitidis FAM18]
 gi|166221758|sp|A1KST1|KTHY_NEIMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120866172|emb|CAM09912.1| putative thymidylate kinase [Neisseria meningitidis FAM18]
 gi|325131877|gb|EGC54577.1| thymidylate kinase [Neisseria meningitidis M6190]
          Length = 206

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS      V  +I  ++
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200


>gi|328758423|gb|EGF72039.1| thymidylate kinase [Propionibacterium acnes HL020PA1]
          Length = 214

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|50841735|ref|YP_054962.1| putative thymidylate kinase [Propionibacterium acnes KPA171202]
 gi|50839337|gb|AAT82004.1| putative thymidylate kinase [Propionibacterium acnes KPA171202]
          Length = 228

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 26  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 85

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 86  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 145

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 146 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 196

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 197 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 228


>gi|15674539|ref|NP_268713.1| thymidylate kinase [Streptococcus pyogenes M1 GAS]
 gi|71910144|ref|YP_281694.1| thymidylate kinase [Streptococcus pyogenes MGAS5005]
 gi|23821808|sp|Q9A190|KTHY_STRP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|13621644|gb|AAK33434.1| putative thymidylate kinase [Streptococcus pyogenes M1 GAS]
 gi|71852926|gb|AAZ50949.1| thymidylate kinase [Streptococcus pyogenes MGAS5005]
          Length = 211

 Score =  248 bits (633), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   D+  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|225849733|ref|YP_002729967.1| thymidylate kinase [Persephonella marina EX-H1]
 gi|225646361|gb|ACO04547.1| thymidylate kinase [Persephonella marina EX-H1]
          Length = 216

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 116/208 (55%), Gaps = 6/208 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEGIEGAGK+T   +L  +L +   +  +TREPGGT   +  R +LL+   + F
Sbjct: 11  RGFFITFEGIEGAGKSTQSKMLYEYLIKNGKNAVLTREPGGTDLGKKIREILLNPSKEIF 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++ A R  HV N+I+P L  G  ++ DRF DS+ AYQG         ++ L +
Sbjct: 71  PPVAELMLYEADRNIHVHNIIKPYLNRGFYVISDRFTDSTLAYQGYARGIDIELVERLND 130

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+ + + PD T I+D+PV+ G+KR+            D  E++ V  H++ R+ FL IA+
Sbjct: 131 IASEGIKPDITFIIDIPVEEGMKRIH------RYREKDRIEQEGVDFHKRLREGFLRIAQ 184

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + +R  ++D     + +   IL I+ +
Sbjct: 185 KERERVVLLDGRKDKEIIFNEILEILRK 212


>gi|161761322|ref|YP_059674.2| thymidylate kinase [Streptococcus pyogenes MGAS10394]
 gi|59798144|sp|Q5XDM2|KTHY_STRP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 211

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|91783552|ref|YP_558758.1| thymidylate kinase [Burkholderia xenovorans LB400]
 gi|123062899|sp|Q13YY3|KTHY_BURXL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91687506|gb|ABE30706.1| thymidylate kinase [Burkholderia xenovorans LB400]
          Length = 206

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+S  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  ++  +R         +   D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEVASERRSA------ARDPDRFESESEAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DSA S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIAQIQRRLEELI 203


>gi|255065851|ref|ZP_05317706.1| dTMP kinase [Neisseria sicca ATCC 29256]
 gi|255049762|gb|EET45226.1| dTMP kinase [Neisseria sicca ATCC 29256]
          Length = 208

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 116/208 (55%), Gaps = 7/208 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+ +GI+GAGK+T++++++R+ +  +  V  TREPGGTP  EA R +LL+      
Sbjct: 2   KPKFITLDGIDGAGKSTNLAVIRRWFESHDLPVLFTREPGGTPVGEALREILLNPETKA- 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AE ++  AAR  H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+ 
Sbjct: 61  GLRAETLMMFAARQQHLEDVILPALADGIHVVSDRFTDATFAYQGGGRGVPLQDIEMLEN 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD T++LD+P+++ + R+        +   D FE++      + R ++L+ A 
Sbjct: 121 WVQGGFGPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFTRVRAVYLERAA 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P+R  ++D   S + V  +I + +  
Sbjct: 175 AHPERYALIDGNRSLEEVRADIEHALAR 202


>gi|229083343|ref|ZP_04215702.1| Thymidylate kinase [Bacillus cereus Rock3-44]
 gi|228699968|gb|EEL52594.1| Thymidylate kinase [Bacillus cereus Rock3-44]
          Length = 208

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GK+T I+ L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIREILHKQEHTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL    ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALERNYLVLCDRFIDSSLAYQGYARGLGVDKVYEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP+ TI LD+  ++GL R++       +  ++  + + +  H++ R+ +L +  
Sbjct: 122 FATEDCMPNLTIYLDIEPEVGLARIEK----DANREVNRLDMESIKFHKRVREGYLQLVD 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +R  +V++    + +   ++ ++ + +
Sbjct: 178 RFANRIVVVNADQPMEEIMEEVIQLIEDKL 207


>gi|261338416|ref|ZP_05966300.1| dTMP kinase [Bifidobacterium gallicum DSM 20093]
 gi|270276387|gb|EFA22241.1| dTMP kinase [Bifidobacterium gallicum DSM 20093]
          Length = 200

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 10/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           +FI+FEGI+GAGKTT + LL + LQ     V VTREPGGT    + R +LL    D    
Sbjct: 1   MFITFEGIDGAGKTTQVKLLAQALQEAGRSVEVTREPGGTALGASLRRLLLEGVADGSAI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA++FAA R  HV  VIRPA+  G  ++CDR++DSS AYQG         + +L  
Sbjct: 61  DEHAEALMFAADRAQHVAQVIRPAMQRGDDVICDRYIDSSVAYQGGGRDIGADQIRALSM 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD TI+LDL   +   R+        +   D  E        + R+ FL +A 
Sbjct: 121 WATGGLVPDLTIVLDLDPALSAARL--------NRPADRMESAGDEFARRTREAFLAMAA 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
            +P+R  ++D++   + +A ++   V
Sbjct: 173 AEPERFRVIDASLPVERIAADVRAAV 198


>gi|260575561|ref|ZP_05843559.1| thymidylate kinase [Rhodobacter sp. SW2]
 gi|259022204|gb|EEW25502.1| thymidylate kinase [Rhodobacter sp. SW2]
          Length = 209

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 6/205 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FISFEGI+G+GK+T   LL   L++  + V  TREPGG+P AE  R ++L    D
Sbjct: 1   MALGRFISFEGIDGSGKSTQSRLLAESLRKLGHSVCQTREPGGSPGAEEIRRLVLEGDPD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  IRPAL  G++++ DRF DS+  YQG         ++ L
Sbjct: 61  RWSAETEILLFTAARRDHLEKTIRPALARGEVVITDRFADSTRMYQGISRGDLGPLVNRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++ +  V PD T+++DL   +GL R   R    +      FE   + +  K R  FL +
Sbjct: 121 HDLMI-GVEPDLTLLIDLDPALGLNRAVARAGAEQ-----RFEDMGLALQIKMRAGFLAL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205
           A   P+R  ++D     ++VA ++L
Sbjct: 175 AAAHPERFRVIDGNRPPEAVAADVL 199


>gi|269796533|ref|YP_003315988.1| thymidylate kinase [Sanguibacter keddieii DSM 10542]
 gi|269098718|gb|ACZ23154.1| thymidylate kinase [Sanguibacter keddieii DSM 10542]
          Length = 215

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 11/212 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            SG FISFEG +GAGK+T   LL  +L++     V  TREPGGT      R  +L    D
Sbjct: 6   QSGYFISFEGGDGAGKSTQSRLLGEWLEQVTGRRVVWTREPGGTELGLVLRQAVLHG--D 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++A  R  HV +++RPAL  G +++ DR+LDSS AYQ    +     ++ L
Sbjct: 64  HVDPRTEALLYATDRAHHVASLVRPALERGDVVITDRYLDSSIAYQAGGRTLPVEEIEQL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + + ++P  T++LD+   +G +R+         A  D  ER     H + RQ +L+ 
Sbjct: 124 STWATEGLLPHATVLLDIDPLVGTRRL--------DAAPDRLERAGDEFHRRTRQAYLER 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P R  +VD++ +  ++   I + V E +
Sbjct: 176 AAQDPARWVVVDASGTVDAIHREIRSAVAERL 207


>gi|59798224|sp|Q6AB62|KTHY_PROAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 204

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 2   GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 62  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 122 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 173 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 204


>gi|325137927|gb|EGC60502.1| thymidylate kinase [Neisseria meningitidis ES14902]
          Length = 206

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 116/203 (57%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  E  R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++DS      V  +I  ++
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200


>gi|332141143|ref|YP_004426881.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype']
 gi|238693284|sp|B4S1N2|KTHY_ALTMD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|327551165|gb|AEA97883.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 222

 Score =  248 bits (633), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 7/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  EG+EGAGK++ I L+ + L      V  TREPGGTP AEA R  +     +  
Sbjct: 2   RGKFIVVEGLEGAGKSSVIGLIVKALTDAGMRVEQTREPGGTPMAEAIRECVKHDWDETV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR+  + N I P+L  G  ++ DR   SS AYQG         + ++ +
Sbjct: 62  SEETELLLMYAARVQLLTNKIYPSLNAGAWVVGDRHDLSSQAYQGGGRGVSEKTMTAISD 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++    PD T+ LD+   +GL+R + R        LD  E+  +   E+ R  +L +A 
Sbjct: 122 IALNGFKPDLTLYLDVDPAVGLERARGR------GELDRIEQAGLGFFERTRARYLSLAE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           N  +   +V++    + V  ++++I+   V + +
Sbjct: 176 ND-ESIIVVNAMQPMEQVHQDVISIIANYVSQHI 208


>gi|183602882|ref|ZP_02964242.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219682707|ref|YP_002469090.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190283|ref|YP_002967677.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195689|ref|YP_002969244.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|183217883|gb|EDT88534.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219620357|gb|ACL28514.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248675|gb|ACS45615.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250243|gb|ACS47182.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289178000|gb|ADC85246.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793270|gb|ADG32805.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis V9]
          Length = 206

 Score =  248 bits (633), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 9/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-V 59
           M +GLFISFEG++GAGKTT ++LL  +L+    +V VTREPGGT      R +LL+    
Sbjct: 1   MGAGLFISFEGVDGAGKTTQVNLLADYLRALGREVVVTREPGGTALGTQIRAMLLTTNPD 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E     EA++FAA R  HV  VIRPAL  G +++ DR+LDSS AYQ          + +
Sbjct: 61  EEISPRTEALLFAADRAQHVSEVIRPALERGAVVITDRYLDSSLAYQSGGRELTADDIRT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +   ++P  T +LD+       R+++          D  E       ++ R  FL+
Sbjct: 121 LSMWATNNLLPARTYLLDIDPRASHTRLEH--------AEDRMESAGDDFQQRTRTAFLE 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A  QP R  ++D+  S   +A  I + V  L++
Sbjct: 173 LAAVQPQRFCVIDAQQSVGEIAALICDDVANLLE 206


>gi|289424286|ref|ZP_06426069.1| dTMP kinase [Propionibacterium acnes SK187]
 gi|289428912|ref|ZP_06430592.1| dTMP kinase [Propionibacterium acnes J165]
 gi|295129812|ref|YP_003580475.1| dTMP kinase [Propionibacterium acnes SK137]
 gi|289154983|gb|EFD03665.1| dTMP kinase [Propionibacterium acnes SK187]
 gi|289157913|gb|EFD06136.1| dTMP kinase [Propionibacterium acnes J165]
 gi|291375883|gb|ADD99737.1| dTMP kinase [Propionibacterium acnes SK137]
 gi|313765300|gb|EFS36664.1| thymidylate kinase [Propionibacterium acnes HL013PA1]
 gi|313772784|gb|EFS38750.1| thymidylate kinase [Propionibacterium acnes HL074PA1]
 gi|313793193|gb|EFS41260.1| thymidylate kinase [Propionibacterium acnes HL110PA1]
 gi|313802718|gb|EFS43936.1| thymidylate kinase [Propionibacterium acnes HL110PA2]
 gi|313806376|gb|EFS44883.1| thymidylate kinase [Propionibacterium acnes HL087PA2]
 gi|313810924|gb|EFS48638.1| thymidylate kinase [Propionibacterium acnes HL083PA1]
 gi|313814577|gb|EFS52291.1| thymidylate kinase [Propionibacterium acnes HL025PA1]
 gi|313815332|gb|EFS53046.1| thymidylate kinase [Propionibacterium acnes HL059PA1]
 gi|313817530|gb|EFS55244.1| thymidylate kinase [Propionibacterium acnes HL046PA2]
 gi|313822009|gb|EFS59723.1| thymidylate kinase [Propionibacterium acnes HL036PA1]
 gi|313824095|gb|EFS61809.1| thymidylate kinase [Propionibacterium acnes HL036PA2]
 gi|313826462|gb|EFS64176.1| thymidylate kinase [Propionibacterium acnes HL063PA1]
 gi|313828770|gb|EFS66484.1| thymidylate kinase [Propionibacterium acnes HL063PA2]
 gi|313831689|gb|EFS69403.1| thymidylate kinase [Propionibacterium acnes HL007PA1]
 gi|313834429|gb|EFS72143.1| thymidylate kinase [Propionibacterium acnes HL056PA1]
 gi|313840380|gb|EFS78094.1| thymidylate kinase [Propionibacterium acnes HL086PA1]
 gi|314916047|gb|EFS79878.1| thymidylate kinase [Propionibacterium acnes HL005PA4]
 gi|314917199|gb|EFS81030.1| thymidylate kinase [Propionibacterium acnes HL050PA1]
 gi|314926586|gb|EFS90417.1| thymidylate kinase [Propionibacterium acnes HL036PA3]
 gi|314931095|gb|EFS94926.1| thymidylate kinase [Propionibacterium acnes HL067PA1]
 gi|314955036|gb|EFS99442.1| thymidylate kinase [Propionibacterium acnes HL027PA1]
 gi|314959075|gb|EFT03177.1| thymidylate kinase [Propionibacterium acnes HL002PA1]
 gi|314961349|gb|EFT05450.1| thymidylate kinase [Propionibacterium acnes HL002PA2]
 gi|314964605|gb|EFT08705.1| thymidylate kinase [Propionibacterium acnes HL082PA1]
 gi|314969704|gb|EFT13802.1| thymidylate kinase [Propionibacterium acnes HL037PA1]
 gi|314974770|gb|EFT18865.1| thymidylate kinase [Propionibacterium acnes HL053PA1]
 gi|314977031|gb|EFT21126.1| thymidylate kinase [Propionibacterium acnes HL045PA1]
 gi|314980307|gb|EFT24401.1| thymidylate kinase [Propionibacterium acnes HL072PA2]
 gi|314985483|gb|EFT29575.1| thymidylate kinase [Propionibacterium acnes HL005PA1]
 gi|314987392|gb|EFT31483.1| thymidylate kinase [Propionibacterium acnes HL005PA2]
 gi|314989067|gb|EFT33158.1| thymidylate kinase [Propionibacterium acnes HL005PA3]
 gi|315078377|gb|EFT50408.1| thymidylate kinase [Propionibacterium acnes HL053PA2]
 gi|315082155|gb|EFT54131.1| thymidylate kinase [Propionibacterium acnes HL078PA1]
 gi|315082702|gb|EFT54678.1| thymidylate kinase [Propionibacterium acnes HL027PA2]
 gi|315086061|gb|EFT58037.1| thymidylate kinase [Propionibacterium acnes HL002PA3]
 gi|315087646|gb|EFT59622.1| thymidylate kinase [Propionibacterium acnes HL072PA1]
 gi|315097318|gb|EFT69294.1| thymidylate kinase [Propionibacterium acnes HL038PA1]
 gi|315099505|gb|EFT71481.1| thymidylate kinase [Propionibacterium acnes HL059PA2]
 gi|315101988|gb|EFT73964.1| thymidylate kinase [Propionibacterium acnes HL046PA1]
 gi|315106312|gb|EFT78288.1| thymidylate kinase [Propionibacterium acnes HL030PA1]
 gi|315110089|gb|EFT82065.1| thymidylate kinase [Propionibacterium acnes HL030PA2]
 gi|327331312|gb|EGE73051.1| dTMP kinase [Propionibacterium acnes HL096PA2]
 gi|327333300|gb|EGE75020.1| dTMP kinase [Propionibacterium acnes HL096PA3]
 gi|327445223|gb|EGE91877.1| thymidylate kinase [Propionibacterium acnes HL013PA2]
 gi|327447308|gb|EGE93962.1| thymidylate kinase [Propionibacterium acnes HL043PA1]
 gi|327450246|gb|EGE96900.1| thymidylate kinase [Propionibacterium acnes HL043PA2]
 gi|327454514|gb|EGF01169.1| thymidylate kinase [Propionibacterium acnes HL087PA3]
 gi|327456584|gb|EGF03239.1| thymidylate kinase [Propionibacterium acnes HL083PA2]
 gi|327457142|gb|EGF03797.1| thymidylate kinase [Propionibacterium acnes HL092PA1]
 gi|328755566|gb|EGF69182.1| thymidylate kinase [Propionibacterium acnes HL087PA1]
 gi|328756894|gb|EGF70510.1| thymidylate kinase [Propionibacterium acnes HL025PA2]
 gi|328761125|gb|EGF74669.1| dTMP kinase [Propionibacterium acnes HL099PA1]
          Length = 214

 Score =  248 bits (633), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|303251157|ref|ZP_07337341.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|307251422|ref|ZP_07533336.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|307253501|ref|ZP_07535371.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|302650008|gb|EFL80180.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306856506|gb|EFM88648.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306859002|gb|EFM91045.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 208

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  EG+EGAGKTT   ++   L++    V  TREPGGTP AE  RH++     +  
Sbjct: 2   RGKFIVLEGLEGAGKTTAHQVILAQLEKAGKSVVQTREPGGTPLAEKLRHLIKHETEEAV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQG         L++L+E
Sbjct: 62  SDKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHLLETLKE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD TI LD+   +GL R + R        LD  E++ +    + RQ +L++ +
Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGR------GELDRIEQQSLDFFYRTRQRYLELTQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           N  ++  I+++  S + VA +I   V   + 
Sbjct: 176 NN-EKAVIINAEQSIEQVAADIQQAVENFLN 205


>gi|189350690|ref|YP_001946318.1| thymidylate kinase [Burkholderia multivorans ATCC 17616]
 gi|189334712|dbj|BAG43782.1| dTMP kinase [Burkholderia multivorans ATCC 17616]
          Length = 207

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 2   MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 62  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVLAAL 207


>gi|169830255|ref|YP_001716237.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C]
 gi|226732654|sp|B1I165|KTHY_DESAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169637099|gb|ACA58605.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C]
          Length = 221

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 8/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG+FI FEGI+GAGKTT ++ L   L   +N+ V VTREPGGT   EA R VLL  G  E
Sbjct: 2   SGVFIVFEGIDGAGKTTQLAYLHEALLSMRNHRVLVTREPGGTRIGEAVRRVLLDTGNSE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA+++AAAR      V+RPAL  G+I+L DRFLDSS AYQG     +   L  + 
Sbjct: 62  MTGETEALLYAAARSQFTAEVVRPALARGEIVLSDRFLDSSLAYQGFGRGLELHRLRQVN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++   + PD T++LDLPV   + R+       +    D  ER+ V   E+ R+ +L++A
Sbjct: 122 FLATGGLRPDLTVLLDLPVAAAVARM-------DPDRRDRLEREGVDFFERVRRGYLELA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              P    IV++       A+ I   V  L+Q R
Sbjct: 175 SADPGHYLIVNAEREAGVCASAIWARVRALLQDR 208


>gi|149914153|ref|ZP_01902684.1| thymidylate kinase [Roseobacter sp. AzwK-3b]
 gi|149811672|gb|EDM71505.1| thymidylate kinase [Roseobacter sp. AzwK-3b]
          Length = 208

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEGI+G+GK+T   LL   L+    DV +TREPGG+P AE  R ++L    D +
Sbjct: 4   GGYFISFEGIDGSGKSTQARLLADHLRGTGRDVVLTREPGGSPGAEEIRALVLEGDGDRW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++F AAR DH+E  I PAL  G+I++CDRF DS+  YQG   +     +D L  
Sbjct: 64  SPETELLLFTAARRDHLERTIAPALEAGQIVICDRFADSTRLYQGLARADLRGLVDQLHS 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD TI++D+    GL R   R +  E      FE     + +K RQ FLD+A+
Sbjct: 124 LMI-GREPDLTILIDMDPATGLGRALARGTGEE-----RFESFGDSMQQKIRQGFLDLAQ 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               R   VD      +VA +I  I    +
Sbjct: 178 EFSARFVTVDGNRQLDAVAADIRQIAEGWL 207


>gi|299769149|ref|YP_003731175.1| thymidylate kinase [Acinetobacter sp. DR1]
 gi|298699237|gb|ADI89802.1| thymidylate kinase [Acinetobacter sp. DR1]
          Length = 199

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCTGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S   V    L  +
Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198


>gi|221198166|ref|ZP_03571212.1| thymidylate kinase [Burkholderia multivorans CGD2M]
 gi|221208343|ref|ZP_03581346.1| thymidylate kinase [Burkholderia multivorans CGD2]
 gi|221215091|ref|ZP_03588058.1| thymidylate kinase [Burkholderia multivorans CGD1]
 gi|221165027|gb|EED97506.1| thymidylate kinase [Burkholderia multivorans CGD1]
 gi|221171756|gb|EEE04200.1| thymidylate kinase [Burkholderia multivorans CGD2]
 gi|221182098|gb|EEE14499.1| thymidylate kinase [Burkholderia multivorans CGD2M]
          Length = 207

 Score =  247 bits (632), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 2   MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 62  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFARTRGE 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVLAAL 207


>gi|314921698|gb|EFS85529.1| thymidylate kinase [Propionibacterium acnes HL050PA3]
          Length = 214

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|94499607|ref|ZP_01306144.1| thymidylate kinase [Oceanobacter sp. RED65]
 gi|94428361|gb|EAT13334.1| thymidylate kinase [Oceanobacter sp. RED65]
          Length = 206

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+ EG+EG GKTT+I  +K +LQ +  D  VTREPGGT   E+ R++LL    D
Sbjct: 1   MQAGLFITVEGVEGVGKTTNIEYIKNWLQHQGIDYVVTREPGGTDLGESLRNLLLHG--D 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +AE ++  AAR  H+E VI+PAL  G+ +LCDRF DS++AYQG        ++  L
Sbjct: 59  DVSDKAELLMMFAARSQHIEKVIKPALAAGRWVLCDRFTDSTFAYQGGGRQLNPEWIRQL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  +E+ PD T +LD PV+IG             +  D  E +D++   + R  FL  
Sbjct: 119 ETLVQEELQPDVTFLLDCPVEIGR------ARAAARSASDRIESQDLVFFNRVRDAFLHR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A    DR  ++D++     V   I +++ EL
Sbjct: 173 ASLY-DRFRVIDASQDLLQVQQQIESVLVEL 202


>gi|161524554|ref|YP_001579566.1| thymidylate kinase [Burkholderia multivorans ATCC 17616]
 gi|160341983|gb|ABX15069.1| dTMP kinase [Burkholderia multivorans ATCC 17616]
          Length = 206

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVLAAL 206


>gi|119503325|ref|ZP_01625409.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080]
 gi|119460971|gb|EAW42062.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080]
          Length = 215

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 6/216 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++  FI+ EG EG GKTT + L++  L+     + VTREPGGT   E  R +LL      
Sbjct: 6   HTAKFITVEGGEGVGKTTQLRLIEARLREAGIPLLVTREPGGTELGEQLRQLLLQKEGLA 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR  HV+ VI PAL  G+ +LCDRF D+S+AYQG         +  L 
Sbjct: 66  PTPMAELLMVFAARAQHVDTVIAPALQRGEWVLCDRFTDASFAYQGFGRGLPLGAIQQLA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E++   + P+ +I+LD+  ++GL+R + R        LD FE + +   E  R  +L   
Sbjct: 126 ELAHPHINPNLSILLDVDPEVGLERARAR------GELDRFELETIPFFEAVRNGYLQRV 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + +P R  ++D+  + + V   + + + E +   +S
Sbjct: 180 KLEPHRWRVIDAGVALEQVEQQLGDCLKEWIADAIS 215


>gi|163732222|ref|ZP_02139668.1| thymidylate kinase [Roseobacter litoralis Och 149]
 gi|161394520|gb|EDQ18843.1| thymidylate kinase [Roseobacter litoralis Och 149]
          Length = 212

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 121/210 (57%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFISFEGI+G+GK+T    L   L+ + ++V  TREPGG+P AE  R ++L    D +
Sbjct: 8   NGLFISFEGIDGSGKSTQSKRLAEHLRVRGHEVVETREPGGSPGAEEIRALVLQGDPDRW 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+  YQG         +D+L +
Sbjct: 68  SAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLHD 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T+++D+   IGL R  +R +  E      FE     +  K R  FL +A+
Sbjct: 128 LMI-GREPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQAKMRAGFLALAQ 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               R  +VD      SV  +++N+V + +
Sbjct: 182 EFKARFRLVDGGRDADSVTQDVINVVDQAL 211


>gi|83943051|ref|ZP_00955511.1| thymidylate kinase [Sulfitobacter sp. EE-36]
 gi|83846059|gb|EAP83936.1| thymidylate kinase [Sulfitobacter sp. EE-36]
          Length = 212

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 81/213 (38%), Positives = 115/213 (53%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFISFEGI+G+GK+T   LLK  L+   + V +TREPGG+  AE  R ++L    D +
Sbjct: 6   KGLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSAGAEEIRALVLQGDPDRW 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  E ++F AAR DH+E  I PAL  GKI++CDRF DS+  YQG         +D L  
Sbjct: 66  SARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHS 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +  V PD T+++D+    GL R  +R ++ E      FE     +    R  FL +A 
Sbjct: 126 LMI-GVEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAA 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             PDR   ++ A S  +VA ++   V   +  R
Sbjct: 180 EFPDRFVTINGAQSIDAVAADVFAQVRPRLDAR 212


>gi|325133815|gb|EGC56471.1| thymidylate kinase [Neisseria meningitidis M13399]
 gi|325143942|gb|EGC66252.1| thymidylate kinase [Neisseria meningitidis M01-240013]
 gi|325206485|gb|ADZ01938.1| thymidylate kinase [Neisseria meningitidis M04-240196]
          Length = 206

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 68/205 (33%), Positives = 117/205 (57%), Gaps = 7/205 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++LD A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLDRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIVWE 210
           +R  ++DS      V  +I  ++  
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVLDR 202


>gi|260752471|ref|YP_003225364.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258551834|gb|ACV74780.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 216

 Score =  247 bits (632), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FIS EG EG GK+T I LL   L+ K    V  TREPGG    +A RH+LL   +  +
Sbjct: 10  GYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDLHRW 69

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++FAAAR +HV  VI+PAL +GK ++CDRF+DSS AYQG+        +  L  
Sbjct: 70  TNATEALLFAAARAEHVARVIKPALEKGKWVVCDRFIDSSLAYQGDAGGLTQEDIRCLHR 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I  Q ++PD T +L LP   G++R Q R    +    + FE++ +  H+K    FL +A 
Sbjct: 130 IGSQGILPDRTFLLTLPEGEGIRRAQER----DKNKGNRFEQRTIDYHKKVNDSFLQLAA 185

Query: 183 NQPDRCHIVDSAHSFQSVATN 203
            +P+R  ++D++ + + V  +
Sbjct: 186 KEPERFRVIDASGNPEEVHRH 206


>gi|294787793|ref|ZP_06753037.1| dTMP kinase [Simonsiella muelleri ATCC 29453]
 gi|294484086|gb|EFG31769.1| dTMP kinase [Simonsiella muelleri ATCC 29453]
          Length = 207

 Score =  247 bits (632), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 8/211 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+  FIS +GI+GAGKTT ++++K++ +++N  V  TREPGGTP  E  R +LL+    
Sbjct: 1   MNA-KFISLDGIDGAGKTTQLNVIKQWFEKQNLPVQFTREPGGTPLGEKLRDILLNP-TS 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++  AAR  H++++I P L +   ++ DRF D+++AYQG         +  L
Sbjct: 59  QINLRTETLLMFAARQQHLDDIILPTLNQNISIVSDRFTDATFAYQGGGRGLPESDIAQL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +      + PD TI+LD+P++I ++R++N      S   D FER++     + R  +L+ 
Sbjct: 119 ENWVQGSLRPDLTILLDVPLEIAIQRIEN------SREKDRFERENSTFFNQVRTAYLNR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  I+DS+H  +S    I + + +L
Sbjct: 173 AAANPKRYAIIDSSHDKESTKAQIEHALNQL 203


>gi|239501058|ref|ZP_04660368.1| thymidylate kinase [Acinetobacter baumannii AB900]
          Length = 199

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S   V    L  +
Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198


>gi|218767791|ref|YP_002342303.1| thymidylate kinase [Neisseria meningitidis Z2491]
 gi|304388080|ref|ZP_07370209.1| thymidylate kinase [Neisseria meningitidis ATCC 13091]
 gi|14285515|sp|Q9JVE7|KTHY_NEIMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|121051799|emb|CAM08105.1| putative thymidylate kinase [Neisseria meningitidis Z2491]
 gi|304337937|gb|EFM04077.1| thymidylate kinase [Neisseria meningitidis ATCC 13091]
 gi|319410042|emb|CBY90376.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis WUE 2594]
          Length = 206

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 117/205 (57%), Gaps = 7/205 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++++K + +R+   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR+ H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++L+ A   P
Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIVWE 210
           +R  ++DS      V  +I  ++  
Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVLDR 202


>gi|304391675|ref|ZP_07373617.1| thymidylate kinase [Ahrensia sp. R2A130]
 gi|303295904|gb|EFL90262.1| thymidylate kinase [Ahrensia sp. R2A130]
          Length = 215

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 3/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T I  L + L+   ++V VTREPGGT  AEA RHV+LS     F
Sbjct: 2   RGHFITFEGGEGAGKSTQIKRLAKKLEDDGHEVVVTREPGGTTGAEAVRHVVLSGAAQPF 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G E EA++FAAAR D+V  +I+PAL  G I+LCDRF+DSS  YQG         +D L+ 
Sbjct: 62  GTELEAVLFAAARADNVRELIKPALARGAIVLCDRFMDSSRVYQGASGGVSSNMMDMLER 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              ++  PD T++ DL  + GLKR      + +    D +E + +     RR  +L IA+
Sbjct: 122 AVTEDARPDLTLLFDLSPEEGLKRAA---DVWKDDGPDRYESEALAQQHIRRDAYLAIAK 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +PDRC I+D++ + ++V+  +  ++      +
Sbjct: 179 AEPDRCKIIDASKTLRTVSKQVDRVIDNFFAAQ 211


>gi|110680630|ref|YP_683637.1| thymidylate kinase [Roseobacter denitrificans OCh 114]
 gi|109456746|gb|ABG32951.1| thymidylate kinase [Roseobacter denitrificans OCh 114]
          Length = 212

 Score =  247 bits (631), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEGI+G+GK+T    L   L+   ++V  TREPGG+P AE  R ++L    D +
Sbjct: 8   TGFFITFEGIDGSGKSTQSKRLAAHLRASGHEVVETREPGGSPGAEEIRALVLQGDPDRW 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+  YQG         +D+L E
Sbjct: 68  SAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLHE 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T+++D+   IGL R  +R +  E      FE     +  + R  FL +A+
Sbjct: 128 LMI-GREPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQTRMRAGFLALAQ 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               R  +VD      SVA  ++ IV + +
Sbjct: 182 EFKARFRLVDGGRDADSVAAEVIKIVDQAL 211


>gi|300311913|ref|YP_003776005.1| thymidylate kinase [Herbaspirillum seropedicae SmR1]
 gi|300074698|gb|ADJ64097.1| thymidylate kinase protein [Herbaspirillum seropedicae SmR1]
          Length = 202

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG FI+FEGI+GAGK+THI  + + L+ +   V  TREPGGT   E  R ++L     
Sbjct: 1   MASGKFITFEGIDGAGKSTHIPFVTQLLRDRGLTVVATREPGGTELGERLRELVLH---H 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  A+R +H+  VI PAL  G  ++ DRF D+++AYQG         LD L
Sbjct: 58  KMHLETEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQGGGRKLALDKLDRL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++ D+P+++   R+           LD FE++        R  +L  
Sbjct: 118 EQWVHPHLQPDLTLLFDVPLEVARARLDA------ERTLDKFEQEKADFFANTRAEYLRR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  ++DS      +  ++  IV  L
Sbjct: 172 AAQFPHRFRLIDSTRPIAVIQEDLRAIVAAL 202


>gi|325123060|gb|ADY82583.1| thymidylate kinase [Acinetobacter calcoaceticus PHEA-2]
          Length = 199

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  +     V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S   V    L  +
Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198


>gi|259047401|ref|ZP_05737802.1| dTMP kinase [Granulicatella adiacens ATCC 49175]
 gi|259035592|gb|EEW36847.1| dTMP kinase [Granulicatella adiacens ATCC 49175]
          Length = 215

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 4/208 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           GLFI+ EG +GAGKTT I+ L   LQ+    D+  TREPGG+  AE  R V+L     E 
Sbjct: 3   GLFITMEGPDGAGKTTVINQLIPLLQKHALVDIVSTREPGGSRIAEDIRKVILDVNNTEM 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EAI++AA R  H+++ I P L +G I+ CDRF+DSS  YQG         +  L  
Sbjct: 63  DERTEAILYAAGRRQHLKDRILPNLEKGNIVFCDRFVDSSLVYQGVARGIGVEEVAELNR 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + P  T+ LD+P ++GL+R+      R +   D  +++ +  H   R+ +L++ +
Sbjct: 123 FATDGLSPSTTLYLDVPAEVGLERIHK---ARGNRQFDRLDQEGLSFHTMVREGYLELLK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P+R   +D+  + + V      ++ E
Sbjct: 180 KYPERMVSIDATQTIEEVVNECFKVLVE 207


>gi|196233920|ref|ZP_03132757.1| dTMP kinase [Chthoniobacter flavus Ellin428]
 gi|196221969|gb|EDY16502.1| dTMP kinase [Chthoniobacter flavus Ellin428]
          Length = 218

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 7/224 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59
           M  G+F+SFEG EG GK+T I LL   L+   + V +TREPGGT   E  RH+L  S   
Sbjct: 1   MPRGIFVSFEGSEGCGKSTQIRLLADRLKALGHQVILTREPGGTEIGEQLRHLLQFSKAG 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +E E ++FAA+R   V  VI PAL  G I+L DRFLDS+  YQG         + +
Sbjct: 61  HAMASETELLLFAASRAQLVREVIAPALEAGAIVLADRFLDSTTVYQGVARKLDPAEVAA 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   +V + +PD T + DL + I  +R+++R +   +   D  E +     E  R  +L 
Sbjct: 121 INRFAVGDTLPDITFVFDLDLAIARERMRHRPAP--AGAPDRMESQPAAFFEAVRAGYLA 178

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +AR    R  ++D+A + + ++  I    W+ +  R+SPL   K
Sbjct: 179 LARENTTRVRLLDAAGTVEDLSNRI----WQELAPRLSPLPVTK 218


>gi|170703706|ref|ZP_02894432.1| dTMP kinase [Burkholderia ambifaria IOP40-10]
 gi|171319768|ref|ZP_02908855.1| dTMP kinase [Burkholderia ambifaria MEX-5]
 gi|170131388|gb|EDS99989.1| dTMP kinase [Burkholderia ambifaria IOP40-10]
 gi|171095004|gb|EDT40029.1| dTMP kinase [Burkholderia ambifaria MEX-5]
          Length = 206

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAASGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVLAAL 206


>gi|325520827|gb|EGC99827.1| thymidylate kinase [Burkholderia sp. TJI49]
          Length = 206

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGRLASAGKQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R         +   D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFTRTRSE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVLAAL 206


>gi|260459470|ref|ZP_05807725.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075]
 gi|259035024|gb|EEW36280.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075]
          Length = 248

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 138/215 (64%), Gaps = 2/215 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EGAGK+T I  L R ++ K YDV +TREPGG+P AEA RHVLLS   +
Sbjct: 25  LARGFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 84

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            FG + EA++FAAAR DHVE VIRPA+  G I+LCDRFLDSS  YQG        F+ +L
Sbjct: 85  PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATL 144

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++++  +MPD T+I D+    GL+R   R    + A  D FE++ + IH+ RR  FL I
Sbjct: 145 EQVAINGMMPDMTLIFDIDPAEGLRRATLRRGSDDGA--DRFEKETLAIHQARRAAFLAI 202

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A  +P+RC +VD++    +V   +   V+  ++ R
Sbjct: 203 AAAEPERCIVVDASAKPDTVEDVVTAAVFAALEAR 237


>gi|315633633|ref|ZP_07888923.1| dTMP kinase [Aggregatibacter segnis ATCC 33393]
 gi|315477675|gb|EFU68417.1| dTMP kinase [Aggregatibacter segnis ATCC 33393]
          Length = 210

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI  EG+EGAGK+T    +   L+     DV  TREPGGTP AE  RH++     + 
Sbjct: 2   AGKFIVIEGLEGAGKSTAHQCVVDTLKELGVNDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG        FL  L+
Sbjct: 62  VTDKAELLMLYAARIQLVDNVIKPALAKGKWVVGDRHDMSSQAYQGGGRQLGAAFLTHLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +I + +  PD T+ LD+   +GL R + R        LD  E++ +    + R  +L++ 
Sbjct: 122 QIVLGDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQHLDFFHRTRARYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 176 KDNP-KAVMINAEQSIEQVQADIKSAVKNW 204


>gi|49475610|ref|YP_033651.1| thymidylate kinase [Bartonella henselae str. Houston-1]
 gi|59798266|sp|Q6G5D6|KTHY_BARHE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49238417|emb|CAF27644.1| Thymidylate kinase [Bartonella henselae str. Houston-1]
          Length = 215

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/215 (43%), Positives = 134/215 (62%), Gaps = 3/215 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           SG FI+FEG EG GKTT I LL + L  K YDV  TREPGGT  AE  RH+LLS  V + 
Sbjct: 2   SGYFITFEGGEGVGKTTQIFLLAQHLYGKGYDVLTTREPGGTAGAEVIRHILLSGQVQQH 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +G   EAI+F AAR+DHV  VI P+L +GK++LCDRF+DS+  YQG  D      L  L+
Sbjct: 62  YGPLIEAILFTAARIDHVSEVIMPSLQKGKVVLCDRFIDSTRVYQGLNDKVSSSTLAVLE 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++ ++ P  T +LD+P    +KR   R    E   +DYFE+ ++ I E+RRQ FL +A
Sbjct: 122 CLALNKIKPQITFLLDIPARCSMKRANLRREKAE--TIDYFEKDELKIQEQRRQAFLQLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           + +P R  ++D   + + +A  I +I  +++  ++
Sbjct: 180 KQEPHRFRVIDGTDTVEVIAQQIRDICDQVMLDQL 214


>gi|282853298|ref|ZP_06262635.1| dTMP kinase [Propionibacterium acnes J139]
 gi|282582751|gb|EFB88131.1| dTMP kinase [Propionibacterium acnes J139]
 gi|314922387|gb|EFS86218.1| thymidylate kinase [Propionibacterium acnes HL001PA1]
 gi|314965424|gb|EFT09523.1| thymidylate kinase [Propionibacterium acnes HL082PA2]
 gi|314982835|gb|EFT26927.1| thymidylate kinase [Propionibacterium acnes HL110PA3]
 gi|315091154|gb|EFT63130.1| thymidylate kinase [Propionibacterium acnes HL110PA4]
 gi|315104893|gb|EFT76869.1| thymidylate kinase [Propionibacterium acnes HL050PA2]
 gi|327329219|gb|EGE70979.1| dTMP kinase [Propionibacterium acnes HL103PA1]
          Length = 214

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG         +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P R  ++++  S + ++  I   V  L+ 
Sbjct: 183 AHPQRYLVLNARKSRKEISEAICQRVTGLLN 213


>gi|115351881|ref|YP_773720.1| thymidylate kinase [Burkholderia ambifaria AMMD]
 gi|172060851|ref|YP_001808503.1| thymidylate kinase [Burkholderia ambifaria MC40-6]
 gi|122323022|sp|Q0BEN7|KTHY_BURCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487583|sp|B1YRL3|KTHY_BURA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|115281869|gb|ABI87386.1| thymidylate kinase [Burkholderia ambifaria AMMD]
 gi|171993368|gb|ACB64287.1| dTMP kinase [Burkholderia ambifaria MC40-6]
          Length = 206

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVLAAL 206


>gi|293399977|ref|ZP_06644123.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306377|gb|EFE47620.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 211

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 6/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+FEG +G+GKTT   +    L    Y V  TREPGG   AE  RHV+L     
Sbjct: 2   MKKGLFITFEGNDGSGKTTISKMAYEKLLDMGYPVVYTREPGGIDIAEQIRHVILDPKNT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA+++AA+R  H+   + PAL + +I+LCDRF+DSS  YQG         +  +
Sbjct: 62  AMDARCEALLYAASRRQHLVEKVLPALAKHQIVLCDRFVDSSLVYQGIARGIGIEEVYKI 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +++  +PD TI L + +  GL R++ R         D  + + +  H+   + +  I
Sbjct: 122 NEFAIEGHLPDATIFLHVDLHTGLSRIETR------GEKDRLDNESMKFHQMVSEGYDTI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                +R H++D+  S + V    +  + E++ 
Sbjct: 176 REMFHERMHVIDATKSIEDVLKATIECLLEIIN 208


>gi|254417944|ref|ZP_05031668.1| thymidylate kinase [Brevundimonas sp. BAL3]
 gi|196184121|gb|EDX79097.1| thymidylate kinase [Brevundimonas sp. BAL3]
          Length = 210

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 7/214 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G FISFEG EG+GK+T +  L   LQ       V  TREPGG+  AE  R+++++  
Sbjct: 1   MTRGKFISFEGGEGSGKSTQVGRLVERLQPVLGERTVVRTREPGGSKGAEVIRNLVVATE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            + + A  E ++  A+R DH+E  IRPAL  G  ++CDRF DSS AYQG        F++
Sbjct: 61  AEPWSAMTETLLMYASRSDHLERTIRPALAAGDWVVCDRFADSSRAYQGAGGGVAQSFIE 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +    V +  PD T++ DLPV++GL+R   R           FE K +  H++ R+ FL
Sbjct: 121 QIDAGVVGDDQPDLTLVFDLPVEVGLERAFGRGLFET-----RFESKGLAFHKRLREGFL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            I    P+RC ++D+  S   V   +   V + +
Sbjct: 176 RIVEAHPERCVLIDAVGSLDEVEARVWQAVQDRL 209


>gi|296157859|ref|ZP_06840693.1| thymidylate kinase [Burkholderia sp. Ch1-1]
 gi|295892105|gb|EFG71889.1| thymidylate kinase [Burkholderia sp. Ch1-1]
          Length = 206

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+S  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R         +   D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEIASERRSA------ARDPDRFESESEAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DSA S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSAQSITQIQRRLEELI 203


>gi|147669348|ref|YP_001214166.1| thymidylate kinase [Dehalococcoides sp. BAV1]
 gi|189028832|sp|A5FR84|KTHY_DEHSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146270296|gb|ABQ17288.1| thymidylate kinase [Dehalococcoides sp. BAV1]
          Length = 208

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 7/208 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++K     +T EPGG+ + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKKGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A+R   ++NVI+PAL +GKI++CDR+ DS+ AYQG         +  +  ++
Sbjct: 63  LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQGYGRGLDLDTVKCVNSLA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD TI LD+     L R       +     D FE ++   H++ R  F  I   +
Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIYATE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           PDR   +D++     + + I   V  L+
Sbjct: 176 PDRFLKLDASLPQSEIFSRIKQRVTILL 203


>gi|315094240|gb|EFT66216.1| thymidylate kinase [Propionibacterium acnes HL060PA1]
          Length = 214

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT + LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 12  GGVFVVFEGGDGAGKTTQVRLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG         +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P R  ++++  S + ++  I   V  L+ 
Sbjct: 183 AHPQRYLVLNARKSRKEISEAICQRVTGLLN 213


>gi|116495711|ref|YP_807445.1| thymidylate kinase [Lactobacillus casei ATCC 334]
 gi|191639199|ref|YP_001988365.1| thymidylate kinase [Lactobacillus casei BL23]
 gi|122262887|sp|Q035W9|KTHY_LACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238693006|sp|B3W9Y8|KTHY_LACCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116105861|gb|ABJ71003.1| thymidylate kinase [Lactobacillus casei ATCC 334]
 gi|190713501|emb|CAQ67507.1| Thymidylate kinase (dTMP kinase) [Lactobacillus casei BL23]
 gi|327383275|gb|AEA54751.1| Thymidylate kinase [Lactobacillus casei LC2W]
 gi|327386459|gb|AEA57933.1| Thymidylate kinase [Lactobacillus casei BD-II]
          Length = 214

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 4/209 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ +  L   L++     +H+TREPGG   +E  R V+L      
Sbjct: 2   TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL +G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + P  T+ LD+PV +GL R+++  + R+    D  +++ +  HE+    ++ + 
Sbjct: 122 QFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQY---DRLDQESLAFHERVHDAYMTLI 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + P R   +D+    + V       +  
Sbjct: 179 VDNPQRIVSIDATEPLEKVVAACFQTITR 207


>gi|293609834|ref|ZP_06692136.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828286|gb|EFF86649.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 199

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  +     V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S   V    L  +
Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198


>gi|189499981|ref|YP_001959451.1| dTMP kinase [Chlorobium phaeobacteroides BS1]
 gi|189495422|gb|ACE03970.1| dTMP kinase [Chlorobium phaeobacteroides BS1]
          Length = 217

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 4/207 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T +  LK++L  K  +V   REPGGT  AE  R +LL    D    
Sbjct: 1   MLITFEGIDGAGKSTQVKKLKKYLVEKGREVLTLREPGGTVVAEKIRELLLESKHD-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V+ VI P L + K+++ DRF DS+ AYQG         L  + +IS
Sbjct: 60  MGELLLFSASRAELVQQVILPELEKSKVIILDRFFDSTTAYQGYGRGLDLNMLQKINDIS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  SL    E+  +D  E   +  +++ R+ +L +A
Sbjct: 120 TFGLQPDLTFFLDISPEDALIRKFSEKSLPLAFENNEMDRMESSGLSFYQRVREGYLKLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +  R  + D+     S+   I+  V
Sbjct: 180 IAEKKRFVLFDACADPDSIHAQIIQKV 206


>gi|19745549|ref|NP_606685.1| thymidylate kinase [Streptococcus pyogenes MGAS8232]
 gi|139474335|ref|YP_001129051.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo]
 gi|23821763|sp|Q8P2B1|KTHY_STRP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223120|sp|A2RG70|KTHY_STRPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|19747670|gb|AAL97184.1| putative thymidylate kinase [Streptococcus pyogenes MGAS8232]
 gi|134272582|emb|CAM30849.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo]
          Length = 211

 Score =  246 bits (630), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I+ EG +GAGKTT +  L   L++K   ++  TREPGG   +E  R ++L    
Sbjct: 1   MITGKLITVEGPDGAGKTTVLEQLIPPLKQKVAQEILTTREPGGVAISEYIRELILDINH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PAL  G+++  DRF+DSS AYQG         +  
Sbjct: 61  TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E +   + PD T+  D+P +IGL R+           ++  + + + IH++ R+ +L 
Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+  P R   +D+    + V +  L  V  L+
Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209


>gi|329117616|ref|ZP_08246333.1| dTMP kinase [Streptococcus parauberis NCFD 2020]
 gi|326908021|gb|EGE54935.1| dTMP kinase [Streptococcus parauberis NCFD 2020]
          Length = 218

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           ++ GL I+FEG +GAGKT+ +  L   L+ + + ++  TREPGG   AE  R V+L    
Sbjct: 8   LSKGLIITFEGPDGAGKTSVLEALLPLLKAEFDKELITTREPGGVAIAEEIREVILDVNN 67

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + E +++ AAR  H+   + PA   GKI+L DRF+DSS AYQG         +  
Sbjct: 68  TAMDYKTELLLYIAARRQHLVEKVLPAKEAGKIVLMDRFIDSSVAYQGSGRGLDKADIQW 127

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + +   V PD T+  D+P  +GL R+    +      ++  + + + +H+  R  +L+
Sbjct: 128 LNDFATDGVDPDLTLYFDVPSSVGLARIAKNRTHE----VNRLDLEKLEMHQAVRNGYLE 183

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+  P+R   +D+++  + V ++  N +   + 
Sbjct: 184 LAKENPNRIVTIDASNVLEQVISDAFNAIKAKLN 217


>gi|257869781|ref|ZP_05649434.1| thymidylate kinase [Enterococcus gallinarum EG2]
 gi|257803945|gb|EEV32767.1| thymidylate kinase [Enterococcus gallinarum EG2]
          Length = 215

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/210 (37%), Positives = 112/210 (53%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SGLFI+ EG +GAGKT+ +  L   LQ     D+  TREPGG   AE  R ++L     E
Sbjct: 2   SGLFITIEGPDGAGKTSVLEELYPRLQLEAKRDIVKTREPGGVKIAEKIRRIILDPKNSE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  VI PAL EGKI++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDERTEALLYAAARRQHLIQVILPALNEGKIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R+Q       +  LD  + + +  H++ R  +L +A
Sbjct: 122 EFATEGTEPDFTLYLDVDSDTGLRRIQE----HRAHQLDRLDAEGLEFHQRVRHAYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              P R H VD+    Q V     + + E 
Sbjct: 178 EENPVRIHKVDARMGLQDVVETSFSAIVEA 207


>gi|239618400|ref|YP_002941722.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1]
 gi|259494274|sp|C5CHP2|KTHY_KOSOT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|239507231|gb|ACR80718.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1]
          Length = 208

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 116/210 (55%), Gaps = 7/210 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEGI+G+GK+T ++L + +L+R + +    REPGGT A E  R +LL      F  
Sbjct: 1   MFISFEGIDGSGKSTQVALFREYLERNSMEYVFIREPGGTQAGEDIREILLHNEYKLF-P 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++F A+R   V  VI PAL + K++L DRFLDSS AYQG         + +L E S
Sbjct: 60  ETELLLFMASRAQIVREVIIPALKKKKLVLADRFLDSSVAYQGYGRGLSIQMVTTLNEFS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              V P  T+ +D+PVD+ +KR+      R     D  E + +   ++ RQ +L++A+  
Sbjct: 120 TGGVTPHLTLFIDVPVDVAVKRM------RREMKHDKIEMESLDFFKRVRQGYLELAKRD 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R  ++D   S + +   ++      ++K
Sbjct: 174 PKRILVIDGTMSVEKIHEQVVKEFLLCLKK 203


>gi|227495669|ref|ZP_03925985.1| thymidylate kinase [Actinomyces coleocanis DSM 15436]
 gi|226830901|gb|EEH63284.1| thymidylate kinase [Actinomyces coleocanis DSM 15436]
          Length = 243

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 9/216 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL+I+FEG E  GKTT I L + +L+   Y + V+REPGGT   +  R+++L  G  +  
Sbjct: 21  GLYITFEGGEACGKTTQIELTQNWLRDLGYQLTVSREPGGTELGQQLRNLILH-GPKDID 79

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +++ A R  HV   IRPAL  G++++ DR+ DS+ AYQG         +  L   
Sbjct: 80  PRCEVLLYLADRAYHVATKIRPALEAGQVVVQDRYFDSAVAYQGAARKLGVSEVRDLNLW 139

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V+ ++P+ T +LD+   + ++R         +   D  E +    H K R+ +L +A  
Sbjct: 140 AVEGLIPEITFLLDIDPRVSMQR--------RAGATDRIEEEPSAFHIKVREQYLALAAA 191

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           +P R H+++++ S + +   I  ++   ++K+   L
Sbjct: 192 EPQRFHVLNASDSIEELQAQIREVLLGALEKKTGLL 227


>gi|327334819|gb|EGE76530.1| dTMP kinase [Propionibacterium acnes HL097PA1]
          Length = 214

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+ FEG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS G    
Sbjct: 12  GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EGK+++CDR++DS+ AYQG   +     +  L  
Sbjct: 72  SSRAEALLYNADKAQHVDGVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FLD+A 
Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  S + ++  I   V  L+ +
Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214


>gi|261822056|ref|YP_003260162.1| thymidylate kinase [Pectobacterium wasabiae WPP163]
 gi|261606069|gb|ACX88555.1| thymidylate kinase [Pectobacterium wasabiae WPP163]
          Length = 219

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT  +++   L+     +V  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R + R        LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRFRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A    D    +D+A S  +V+ +I   + + +Q++
Sbjct: 174 ELAAED-DSILTIDAAQSIDAVSADIQAALQQWLQRQ 209


>gi|325266947|ref|ZP_08133618.1| dTMP kinase [Kingella denitrificans ATCC 33394]
 gi|324981688|gb|EGC17329.1| dTMP kinase [Kingella denitrificans ATCC 33394]
          Length = 218

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 7/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+G+GKTT +++++ +   +   V  TREPGGTP  E  R +LL          
Sbjct: 7   FITLDGIDGSGKTTQLNVIREWFAARKMPVVFTREPGGTPLGEKLRELLLDPQT-RVSLR 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E+V+ PAL +G  ++ DRF D+++AYQG         ++ L++   
Sbjct: 66  TETLLMFAARRQHLEDVVLPALAQGIHVVSDRFTDATFAYQGGGRGLPTAEVEVLEDWVQ 125

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI+LD+P+++ + R++       S   D FER+D     + R  +L  A   P
Sbjct: 126 GSLRPDLTILLDVPLEVSVARIEG------SRDKDRFEREDSAFFARVRAAYLQRAAQSP 179

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R  +++S      V  +I  ++  L +
Sbjct: 180 QRYAVINSHRDKAEVKQDIEAVLNRLFR 207


>gi|114704619|ref|ZP_01437527.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506]
 gi|114539404|gb|EAU42524.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506]
          Length = 226

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/210 (44%), Positives = 135/210 (64%), Gaps = 3/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEG +G+GKTT +  L + L+   +DV  TREPGGTP A+A RHV+LS    +F
Sbjct: 2   AGKFITFEGGDGSGKTTQVLRLAKMLREYGFDVVTTREPGGTPGADAIRHVVLSGAARDF 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DH++ VIRPAL EG I++CDRF DS+  YQ         FLD L+ 
Sbjct: 62  GPNIEAVLFAAARADHLDKVIRPALEEGAIVICDRFHDSTRVYQAATKDLDLAFLDRLET 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  V PD TIILD+P ++G +R + R S  E+   D FE   + +H +RR+ FL IA 
Sbjct: 122 ATLDGVAPDLTIILDVPAELGYERAKARRSEAEA---DRFESDALDVHAERRERFLAIAE 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++PDRC ++D     + +A +I+  + + +
Sbjct: 179 DEPDRCVVIDGRGEEEEIAEDIVAALEDRL 208


>gi|229159205|ref|ZP_04287230.1| Thymidylate kinase [Bacillus cereus R309803]
 gi|228624220|gb|EEK81021.1| Thymidylate kinase [Bacillus cereus R309803]
          Length = 208

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ E +
Sbjct: 178 RFSDRIVVVNADQPMEQLIEEVVQIIEEKL 207


>gi|170692442|ref|ZP_02883605.1| dTMP kinase [Burkholderia graminis C4D1M]
 gi|170142872|gb|EDT11037.1| dTMP kinase [Burkholderia graminis C4D1M]
          Length = 206

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R         +   D FE +     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFESESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  I+DS+ S   +   +  ++  L
Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEELIASL 206


>gi|170718663|ref|YP_001783858.1| thymidylate kinase [Haemophilus somnus 2336]
 gi|189028835|sp|B0URV9|KTHY_HAES2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|168826792|gb|ACA32163.1| dTMP kinase [Haemophilus somnus 2336]
          Length = 210

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 117/217 (53%), Gaps = 8/217 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EG+EGAGK++   ++   L     ++V  TREPGGTP AE  R+++     
Sbjct: 1   MKTGKFIVIEGLEGAGKSSTHQVVVNTLTEFGIHEVVFTREPGGTPLAEKLRYLIKHEAE 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +   A+AE ++  AAR+  VENVI+PAL  GK ++ DR   SS AYQG         + +
Sbjct: 61  ELVTAKAELLMLYAARVQLVENVIKPALARGKWVVGDRHDLSSQAYQGGGRGLDRHLMTT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+   + +  PD T+ LD+  +IGL R + R        LD  E++++    + R+ +L 
Sbjct: 121 LKNAVLGDFKPDFTLYLDIEPEIGLARAKGR------GELDRIEQQNLDFFHRTRERYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           + +  P+   ++++    + V  +I   V + +++ V
Sbjct: 175 LVQQDPN-AVLINAGQPIELVQQDIRKAVQKFIEENV 210


>gi|220911618|ref|YP_002486927.1| dTMP kinase [Arthrobacter chlorophenolicus A6]
 gi|219858496|gb|ACL38838.1| dTMP kinase [Arthrobacter chlorophenolicus A6]
          Length = 232

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/216 (36%), Positives = 114/216 (52%), Gaps = 8/216 (3%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN    GLFI+FEG +GAGK+T  + L   L+ +   V  TREPGGTP  E  R ++L  
Sbjct: 1   MNKHSAGLFIAFEGGDGAGKSTQAARLAEALESRGLTVLRTREPGGTPIGEKLRSLVLDH 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G     A  EA++FAA+R  H   VIRPAL  G I+L DR++DSS AYQG         +
Sbjct: 61  GHGHIDAHTEALIFAASRAAHAGQVIRPALERGDIVLTDRYIDSSVAYQGAGRDLGMDAV 120

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL E +   + P  T++LD+  ++G  R          A  D  E +    H + R+ F
Sbjct: 121 RSLNEWATSGLQPHLTVLLDVEPEVGRTR-----RTAGDATEDRLESEADEFHARIREAF 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           LD+A  +P    ++ +      +A  IL+ V+ L++
Sbjct: 176 LDLAAARPASYLVLPARLPVNDLAAMILDRVFGLLE 211


>gi|227486758|ref|ZP_03917074.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235228|gb|EEI85243.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172]
          Length = 207

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 7/214 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G FI FEG +G+GKTT I  +K  L+ K+Y +   REPGGT  +E  R +++     
Sbjct: 1   MN-GKFIVFEGPDGSGKTTIIKKVKELLENKDYSISYYREPGGTSISEKIRSIIIDNDNY 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A+ EA++FA++R   V   I P L EGKI++CDRF+ SS  YQG   +     + ++
Sbjct: 60  MMDAKTEALLFASSRAQLVAEKITPDLKEGKIVICDRFVMSSLLYQGLGRALGVDNIKTI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +   + PD T+  ++     L+R +  +S       D  E +D   H+     ++ +
Sbjct: 120 NDFATGGLKPDLTLFFNIDYKTALERKRANFS------PDRLENEDFSFHKTIFDGYMKM 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A    D    VD+  S + +  +++NI+++L++ 
Sbjct: 174 ADLYKDEIKKVDARKSIEDLTEDVINIIYQLLED 207


>gi|269955162|ref|YP_003324951.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894]
 gi|269303843|gb|ACZ29393.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894]
          Length = 281

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 11/211 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+SFEG +G GKTT   LL  +L      +V VTREPGGT      R ++L    ++
Sbjct: 4   RGYFVSFEGGDGGGKTTQARLLGDWLGTALGREVVVTREPGGTALGATLRQLILHG--ED 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  HV +++RPAL  G +++ DR+LDSS AYQ          ++ L 
Sbjct: 62  MDPRTEALLYAADRAHHVASLVRPALERGAVVITDRYLDSSVAYQSGGRELSEQEVEDLS 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +V+ ++PD TI+LD+ +     R+        S  LD  ER D    ++ R  +   A
Sbjct: 122 LWAVRGLLPDVTILLDVDLATSGARM--------SGDLDRLERVDDAFRQRTRDAYHRRA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  +VD+A + + V   +   V E +
Sbjct: 174 AADPARWVVVDAAGTVEEVHAQVRAAVAERL 204


>gi|298244278|ref|ZP_06968084.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297551759|gb|EFH85624.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 217

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 113/213 (53%), Gaps = 1/213 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ ISFEG++GAGKTT ++LL+ +LQ +      TREPGG+P     R +LL+    
Sbjct: 1   MERGVLISFEGLDGAGKTTQMNLLEAWLQSQGVSYLRTREPGGSPLGVEIRRLLLNRPDL 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA++F A R  H   VI PAL EGK+++ DR  DSS AYQG         ++ L
Sbjct: 61  HISPLAEALLFQADRAQHFAEVILPALDEGKVIVSDRCFDSSIAYQGAARGVGEQLVEDL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179
             ++ Q   PD TI+LDLP +   +R         +     +F+R+    H   R+ FL 
Sbjct: 121 SLLATQGHQPDLTIMLDLPPEKVQQRTNLAVDQGGTRTEQSHFDRETETFHRTLREAFLT 180

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +AR  P R  ++D++ + + +   I   V  L+
Sbjct: 181 LARRHPQRIKVLDASRTPEVIQREIQGHVERLL 213


>gi|259415239|ref|ZP_05739161.1| thymidylate kinase [Silicibacter sp. TrichCH4B]
 gi|259349149|gb|EEW60903.1| thymidylate kinase [Silicibacter sp. TrichCH4B]
          Length = 214

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEGI+G+GK++   LL   L+    +V  TREPGG+  AE  R ++L    D + 
Sbjct: 8   GLFLTFEGIDGSGKSSQCRLLADHLRGLGREVVQTREPGGSAGAEEIRSLVLEGDPDRWS 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +DSL ++
Sbjct: 68  AETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRATVDSLHKL 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD TI++D+  + GL R + R    E      FE   + + EK R  FL +A  
Sbjct: 128 MI-GREPDVTILIDMDPETGLARAKGRQGTEE-----RFEDFGLALQEKMRAGFLSLADE 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             DR  IVD A    +VA +I  I    + +R
Sbjct: 182 FADRFRIVDGAQDMNAVAADIARIAEAELDQR 213


>gi|260551489|ref|ZP_05825673.1| thymidylate kinase [Acinetobacter sp. RUH2624]
 gi|260405483|gb|EEW98976.1| thymidylate kinase [Acinetobacter sp. RUH2624]
          Length = 199

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALASNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + ++
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKS 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S + V    L  +
Sbjct: 174 EPERIKRLDATQSPEQVFEQALQYL 198


>gi|169795088|ref|YP_001712881.1| thymidylate kinase [Acinetobacter baumannii AYE]
 gi|213158250|ref|YP_002320301.1| thymidylate kinase [Acinetobacter baumannii AB0057]
 gi|215482638|ref|YP_002324830.1| thymidylate kinase [Acinetobacter baumannii AB307-0294]
 gi|294836647|ref|ZP_06781330.1| thymidylate kinase [Acinetobacter sp. 6013113]
 gi|294860782|ref|ZP_06798551.1| thymidylate kinase [Acinetobacter sp. 6013150]
 gi|301345832|ref|ZP_07226573.1| thymidylate kinase [Acinetobacter baumannii AB056]
 gi|301512395|ref|ZP_07237632.1| thymidylate kinase [Acinetobacter baumannii AB058]
 gi|301594756|ref|ZP_07239764.1| thymidylate kinase [Acinetobacter baumannii AB059]
 gi|226732648|sp|B7GYE0|KTHY_ACIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732649|sp|B7I585|KTHY_ACIB5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487546|sp|B0VCV4|KTHY_ACIBY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169148015|emb|CAM85878.1| thymidylate kinase [Acinetobacter baumannii AYE]
 gi|213057410|gb|ACJ42312.1| thymidylate kinase [Acinetobacter baumannii AB0057]
 gi|213987116|gb|ACJ57415.1| thymidylate kinase [Acinetobacter baumannii AB307-0294]
          Length = 199

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHNENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQN 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 121 FVSS-MPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S   V    L  +
Sbjct: 174 EPERIKRLDATQSPDQVFEQALQYL 198


>gi|307729688|ref|YP_003906912.1| thymidylate kinase [Burkholderia sp. CCGE1003]
 gi|307584223|gb|ADN57621.1| thymidylate kinase [Burkholderia sp. CCGE1003]
          Length = 206

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH++  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R         +   D FER+     E+ R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFERESAAFFERTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  I+DS+ S   +   + +++ +L
Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEDLLAKL 206


>gi|56551986|ref|YP_162825.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543560|gb|AAV89714.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 216

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FIS EG EG GK+T I LL   L+ K    V  TREPGG    +A RH+LL   +  +
Sbjct: 10  GYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDLHRW 69

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++FAAAR +HV  VI+PAL EGK ++CDRF+DSS AYQG+        +  L  
Sbjct: 70  TNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQGDIRCLHR 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I  Q ++PD T +L LP   G++R Q R    +    + FE++ +  H+K    FL +A 
Sbjct: 130 IGSQGILPDRTFLLTLPEGEGIRRAQER----DKNKGNRFEQRTIDYHKKVNDSFLQLAA 185

Query: 183 NQPDRCHIVDSAHSFQSVATN 203
            +P+R  ++D++ + + V  +
Sbjct: 186 KEPERFRVIDASGNPEEVHRH 206


>gi|237756554|ref|ZP_04585078.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691282|gb|EEP60366.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 204

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 8/207 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGIE +GKTT I+LL  +L+    +V  TREPGGT   +  R +LLS   ++F 
Sbjct: 2   GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ A R  H+ N+I+P+L    I+L DR++DS+ AYQ       +  +  L  +
Sbjct: 62  YIAELLLYEADRNIHIHNIIKPSLEADYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + P+ T ++D+P  I LKR+            D  E +D+  H+K R+ FL IA N
Sbjct: 122 ATDRLKPNLTFLIDIPAQISLKRLSK--------TKDRIESEDIEFHKKLREGFLKIAEN 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
           + DR  ++D       +   I++ + +
Sbjct: 174 EKDRFVVIDGTMDIMEIHKIIVDTLKQ 200


>gi|73541128|ref|YP_295648.1| thymidylate kinase [Ralstonia eutropha JMP134]
 gi|123625155|sp|Q471X9|KTHY_RALEJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72118541|gb|AAZ60804.1| thymidylate kinase [Ralstonia eutropha JMP134]
          Length = 203

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 11/211 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G FI+FEGI+GAGK+THI  +   L+ +     V  TREPGGTP  E  R +LL     
Sbjct: 2   RGKFITFEGIDGAGKSTHIGAVAARLRERKDIPAVVTTREPGGTPLGEDLRQILLH---R 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         L++L
Sbjct: 59  KMHLETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQGGGRGLATSRLETL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +      + PD T++ D+P++   +R+        +   D FE +     E+ R  +L  
Sbjct: 119 ETWVQDGLQPDLTLLFDVPLETASERLAG------AREPDKFEAESRAFFERTRAEYLRR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P+R  ++D+  S +++   +  I+  L
Sbjct: 173 AAQAPERFRVIDATQSIEAIRVELEKIISTL 203


>gi|227510683|ref|ZP_03940732.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189804|gb|EEI69871.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 216

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ +    Q++    + VTREPGG   +E  R V+L     E
Sbjct: 2   TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL   K++LCDR++DSS AYQG         +  + 
Sbjct: 62  MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + ++++P  TI  D+PV++GL R+      R+S+ +D  + +    H++  Q ++ + 
Sbjct: 122 EFATEKILPYKTIYFDIPVEVGLNRIAK---HRDSSKIDRLDVETTAFHKRVHQGYMKLI 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               DR  I+D+    + V  +  +++ ++
Sbjct: 179 GEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208


>gi|224475615|ref|YP_002633221.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420222|emb|CAL27036.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 204

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT +  +   L  ++YDV  TREPGG PAAE  R +LL    +     
Sbjct: 4   FITFEGPEGSGKTTVLQRVAERL-SQDYDVLKTREPGGVPAAEQIREILLDG--EAVDDR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL E K++LCDR++DSS AYQG         + ++ E ++
Sbjct: 61  TEALLFAASRREHLVEKVLPALKEDKVVLCDRYIDSSLAYQGFARGIGVEEVRAINEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  + G +R++N         ++  + + +  H++  + + D+   +P
Sbjct: 121 NGLYPDLTIYLDITAETGRERIEN-----NDRNMNRLDHESIAFHQRVIKGYHDLIDKEP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +R  ++D+    ++V  +    +   + K
Sbjct: 176 ERFKVIDANQELEAVVEDTYTAIKMFLGK 204


>gi|330446410|ref|ZP_08310062.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328490601|dbj|GAA04559.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 209

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 9/214 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           G FI  EG+EGAGK+T I+ +   L +    D   TREPGGTP AE  R ++     DE 
Sbjct: 3   GKFIVIEGLEGAGKSTAINQVMDTLAQHGINDPVSTREPGGTPLAEQMRALVKEGHPDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG         +++L+
Sbjct: 63  LTDMAELLLLYAARIQLVDNVIKPALNQGKWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI +D+  ++GL+R + R        LD  E+ ++    + R  FL+++
Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRVRARFLELS 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            NQP+   I+D++ + + V   + + +   ++++
Sbjct: 177 ENQPN-VIIIDASQTLEQVTAALRSALNTWLEQQ 209


>gi|148657338|ref|YP_001277543.1| dTMP kinase [Roseiflexus sp. RS-1]
 gi|166223113|sp|A5UY90|KTHY_ROSS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148569448|gb|ABQ91593.1| thymidylate kinase [Roseiflexus sp. RS-1]
          Length = 226

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 6/214 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG EG+GK+T   LL   L  + + V +TREPGGT   +  R ++L     E   
Sbjct: 3   LFVTFEGPEGSGKSTQARLLYESLHARRFPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F+AAR   V  VIRP L +G I+LCDR+ DS++AYQG         L  +   +
Sbjct: 63  TAEMLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTFAYQGYGLGRDLAELRVITAAA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLD---YFERKDVMIHEKRRQIFL 178
              + PD T  LD+    GL+R +    R + +  A  D     + +++  H++    + 
Sbjct: 123 TGGLRPDITFYLDISAAEGLERKRRKGARSTGQRGANNDEWNRLDARELEYHQRVEAGYR 182

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++    P+R  ++D+  S +++A  I  IV   +
Sbjct: 183 ELIAADPERWRVLDARQSIEALAEQIGAIVEPYL 216


>gi|306831966|ref|ZP_07465121.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304425892|gb|EFM29009.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 211

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/214 (32%), Positives = 110/214 (51%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +       PD T+  D+  +IGL R+           ++  + + + +H++ R+ +L +
Sbjct: 121 NDFVTDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVREGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A  +  R   +D++     V +  L+ + E + K
Sbjct: 177 AEQEK-RIVTIDASRELADVVSETLHTILEQLAK 209


>gi|83719414|ref|YP_442675.1| thymidylate kinase [Burkholderia thailandensis E264]
 gi|167581613|ref|ZP_02374487.1| thymidylate kinase [Burkholderia thailandensis TXDOH]
 gi|167619729|ref|ZP_02388360.1| thymidylate kinase [Burkholderia thailandensis Bt4]
 gi|257138888|ref|ZP_05587150.1| thymidylate kinase [Burkholderia thailandensis E264]
 gi|123536877|sp|Q2SWM4|KTHY_BURTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|83653239|gb|ABC37302.1| thymidylate kinase [Burkholderia thailandensis E264]
          Length = 206

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/215 (34%), Positives = 106/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+P  I   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPQIASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A+  P R  IVDS+     +   +  ++  L
Sbjct: 172 YLRRAQEAPHRFVIVDSSEPIAQIRKQLEGVLAAL 206


>gi|154249383|ref|YP_001410208.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1]
 gi|171769338|sp|A7HKW8|KTHY_FERNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|154153319|gb|ABS60551.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1]
          Length = 197

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 11/208 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+SFEGI+G GK+T ++LL  +L+ K       REPGGT   E  R +L+     E  A
Sbjct: 1   MFVSFEGIDGCGKSTQVNLLVNYLEEKGIPYIKVREPGGTHLGEKIRELLI---TQEMCA 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE+VI+PAL  GKI++ DRF  SS AYQG         +  L + +
Sbjct: 58  RSELLLFLASRAQLVESVIKPALKNGKIVIADRFAHSSVAYQGCGRELGPETVKILNDFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             +  PD    +D+PV++ ++R++N++        D  E++     E  R  +L +A+  
Sbjct: 118 TDKTYPDIVFYIDVPVNVAMERMKNQHK-------DRIEKEGKEFWESIRNCYLKMAKEN 170

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
            +   I+D   + + +   I+ +    +
Sbjct: 171 -ENFVIIDGTRTIEEIHREIVKVFNAYL 197


>gi|302873019|ref|YP_003841652.1| thymidylate kinase [Clostridium cellulovorans 743B]
 gi|307688812|ref|ZP_07631258.1| thymidylate kinase [Clostridium cellulovorans 743B]
 gi|302575876|gb|ADL49888.1| thymidylate kinase [Clostridium cellulovorans 743B]
          Length = 212

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 7/210 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G  I+ EG +G+GK+T I LLK++   + Y+V  TREPGGT  +E  R ++L    +E
Sbjct: 8   NRGYLITIEGPDGSGKSTQIELLKKYFNDRGYEVVTTREPGGTKISEKIRELILDNDNEE 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA+R   VE V++PA+ EGKI+LCDRF+ SS  YQG         + ++ 
Sbjct: 68  MNGICEALLYAASRAQLVEQVLKPAIYEGKIVLCDRFVHSSLVYQGYARELGVNQVLNIN 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E ++  +  D TI++D+P ++G++R + +        LD  E      H K    +  I 
Sbjct: 128 EFALNGLKADLTIMIDIPYELGIERKRKQKK------LDRLENGGDEFHNKVFNGYQQIV 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +   +   I+D   + + +  +I+  + EL
Sbjct: 182 KTMKN-VVIIDGTKAVEEIHKDIVKTIAEL 210


>gi|229015433|ref|ZP_04172435.1| Thymidylate kinase [Bacillus cereus AH1273]
 gi|229021638|ref|ZP_04178225.1| Thymidylate kinase [Bacillus cereus AH1272]
 gi|228739641|gb|EEL90050.1| Thymidylate kinase [Bacillus cereus AH1272]
 gi|228745852|gb|EEL95852.1| Thymidylate kinase [Bacillus cereus AH1273]
          Length = 208

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDIAFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +VD+    + +   ++ IV + +
Sbjct: 178 RFSDRIVVVDADQPMEKLIEEVIQIVEDKL 207


>gi|194468114|ref|ZP_03074100.1| dTMP kinase [Lactobacillus reuteri 100-23]
 gi|194452967|gb|EDX41865.1| dTMP kinase [Lactobacillus reuteri 100-23]
          Length = 213

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ I  ++R L+ +     V  TREPGG   +E  R VL      +
Sbjct: 3   GKFISFEGPDGAGKTSVIQQIQRELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDRF+DSS AYQG         +  + 
Sbjct: 63  MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  +MP  TI LD+  +IGLKR+        S  ++  + + +  H   RQ +L + 
Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRIAE----HRSNQVNRLDEEKLEFHRTVRQSYLKLY 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +N P+R  ++D++   + V  ++   + +
Sbjct: 179 QNYPERIKLIDASQPLKKVIEDVKATIHD 207


>gi|29377238|ref|NP_816392.1| thymidylate kinase [Enterococcus faecalis V583]
 gi|227554247|ref|ZP_03984294.1| thymidylate kinase [Enterococcus faecalis HH22]
 gi|229549121|ref|ZP_04437846.1| thymidylate kinase [Enterococcus faecalis ATCC 29200]
 gi|255971839|ref|ZP_05422425.1| thymidylate kinase [Enterococcus faecalis T1]
 gi|255974836|ref|ZP_05425422.1| thymidylate kinase [Enterococcus faecalis T2]
 gi|256763385|ref|ZP_05503965.1| thymidylate kinase [Enterococcus faecalis T3]
 gi|256854059|ref|ZP_05559424.1| thymidylate kinase [Enterococcus faecalis T8]
 gi|256957990|ref|ZP_05562161.1| thymidylate kinase [Enterococcus faecalis DS5]
 gi|256960991|ref|ZP_05565162.1| thymidylate kinase [Enterococcus faecalis Merz96]
 gi|256963867|ref|ZP_05568038.1| thymidylate kinase [Enterococcus faecalis HIP11704]
 gi|257079927|ref|ZP_05574288.1| thymidylate kinase [Enterococcus faecalis JH1]
 gi|257081675|ref|ZP_05576036.1| thymidylate kinase [Enterococcus faecalis E1Sol]
 gi|257084272|ref|ZP_05578633.1| thymidylate kinase [Enterococcus faecalis Fly1]
 gi|257087729|ref|ZP_05582090.1| thymidylate kinase [Enterococcus faecalis D6]
 gi|257416932|ref|ZP_05593926.1| thymidylate kinase [Enterococcus faecalis AR01/DG]
 gi|257420151|ref|ZP_05597145.1| thymidylate kinase [Enterococcus faecalis T11]
 gi|257421627|ref|ZP_05598617.1| thymidylate kinase [Enterococcus faecalis X98]
 gi|293384623|ref|ZP_06630488.1| dTMP kinase [Enterococcus faecalis R712]
 gi|293386762|ref|ZP_06631333.1| dTMP kinase [Enterococcus faecalis S613]
 gi|294779714|ref|ZP_06745102.1| dTMP kinase [Enterococcus faecalis PC1.1]
 gi|300860317|ref|ZP_07106404.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11]
 gi|307269207|ref|ZP_07550561.1| thymidylate kinase [Enterococcus faecalis TX4248]
 gi|307271815|ref|ZP_07553086.1| thymidylate kinase [Enterococcus faecalis TX0855]
 gi|307277000|ref|ZP_07558110.1| thymidylate kinase [Enterococcus faecalis TX2134]
 gi|307278693|ref|ZP_07559761.1| thymidylate kinase [Enterococcus faecalis TX0860]
 gi|307290232|ref|ZP_07570148.1| thymidylate kinase [Enterococcus faecalis TX0411]
 gi|312900123|ref|ZP_07759439.1| thymidylate kinase [Enterococcus faecalis TX0470]
 gi|312906447|ref|ZP_07765455.1| thymidylate kinase [Enterococcus faecalis DAPTO 512]
 gi|312951938|ref|ZP_07770826.1| thymidylate kinase [Enterococcus faecalis TX0102]
 gi|312979395|ref|ZP_07791083.1| thymidylate kinase [Enterococcus faecalis DAPTO 516]
 gi|46576515|sp|Q830L6|KTHY_ENTFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|29344704|gb|AAO82462.1| thymidylate kinase [Enterococcus faecalis V583]
 gi|227176607|gb|EEI57579.1| thymidylate kinase [Enterococcus faecalis HH22]
 gi|229305746|gb|EEN71742.1| thymidylate kinase [Enterococcus faecalis ATCC 29200]
 gi|255962857|gb|EET95333.1| thymidylate kinase [Enterococcus faecalis T1]
 gi|255967708|gb|EET98330.1| thymidylate kinase [Enterococcus faecalis T2]
 gi|256684636|gb|EEU24331.1| thymidylate kinase [Enterococcus faecalis T3]
 gi|256711002|gb|EEU26045.1| thymidylate kinase [Enterococcus faecalis T8]
 gi|256948486|gb|EEU65118.1| thymidylate kinase [Enterococcus faecalis DS5]
 gi|256951487|gb|EEU68119.1| thymidylate kinase [Enterococcus faecalis Merz96]
 gi|256954363|gb|EEU70995.1| thymidylate kinase [Enterococcus faecalis HIP11704]
 gi|256987957|gb|EEU75259.1| thymidylate kinase [Enterococcus faecalis JH1]
 gi|256989705|gb|EEU77007.1| thymidylate kinase [Enterococcus faecalis E1Sol]
 gi|256992302|gb|EEU79604.1| thymidylate kinase [Enterococcus faecalis Fly1]
 gi|256995759|gb|EEU83061.1| thymidylate kinase [Enterococcus faecalis D6]
 gi|257158760|gb|EEU88720.1| thymidylate kinase [Enterococcus faecalis ARO1/DG]
 gi|257161979|gb|EEU91939.1| thymidylate kinase [Enterococcus faecalis T11]
 gi|257163451|gb|EEU93411.1| thymidylate kinase [Enterococcus faecalis X98]
 gi|291078081|gb|EFE15445.1| dTMP kinase [Enterococcus faecalis R712]
 gi|291083765|gb|EFE20728.1| dTMP kinase [Enterococcus faecalis S613]
 gi|294453205|gb|EFG21619.1| dTMP kinase [Enterococcus faecalis PC1.1]
 gi|300849356|gb|EFK77106.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11]
 gi|306498653|gb|EFM68154.1| thymidylate kinase [Enterococcus faecalis TX0411]
 gi|306504633|gb|EFM73835.1| thymidylate kinase [Enterococcus faecalis TX0860]
 gi|306506423|gb|EFM75583.1| thymidylate kinase [Enterococcus faecalis TX2134]
 gi|306511693|gb|EFM80692.1| thymidylate kinase [Enterococcus faecalis TX0855]
 gi|306514426|gb|EFM82987.1| thymidylate kinase [Enterococcus faecalis TX4248]
 gi|310627601|gb|EFQ10884.1| thymidylate kinase [Enterococcus faecalis DAPTO 512]
 gi|310630127|gb|EFQ13410.1| thymidylate kinase [Enterococcus faecalis TX0102]
 gi|311287766|gb|EFQ66322.1| thymidylate kinase [Enterococcus faecalis DAPTO 516]
 gi|311292758|gb|EFQ71314.1| thymidylate kinase [Enterococcus faecalis TX0470]
 gi|315025470|gb|EFT37402.1| thymidylate kinase [Enterococcus faecalis TX2137]
 gi|315030416|gb|EFT42348.1| thymidylate kinase [Enterococcus faecalis TX4000]
 gi|315035135|gb|EFT47067.1| thymidylate kinase [Enterococcus faecalis TX0027]
 gi|315148725|gb|EFT92741.1| thymidylate kinase [Enterococcus faecalis TX4244]
 gi|315151798|gb|EFT95814.1| thymidylate kinase [Enterococcus faecalis TX0012]
 gi|315154273|gb|EFT98289.1| thymidylate kinase [Enterococcus faecalis TX0031]
 gi|315155624|gb|EFT99640.1| thymidylate kinase [Enterococcus faecalis TX0043]
 gi|315159635|gb|EFU03652.1| thymidylate kinase [Enterococcus faecalis TX0312]
 gi|315168745|gb|EFU12762.1| thymidylate kinase [Enterococcus faecalis TX1341]
 gi|315170439|gb|EFU14456.1| thymidylate kinase [Enterococcus faecalis TX1342]
 gi|315173504|gb|EFU17521.1| thymidylate kinase [Enterococcus faecalis TX1346]
 gi|315573802|gb|EFU85993.1| thymidylate kinase [Enterococcus faecalis TX0309B]
 gi|315580314|gb|EFU92505.1| thymidylate kinase [Enterococcus faecalis TX0309A]
 gi|323481685|gb|ADX81124.1| thymidylate kinase [Enterococcus faecalis 62]
 gi|327535978|gb|AEA94812.1| thymidylate kinase [Enterococcus faecalis OG1RF]
 gi|329572901|gb|EGG54522.1| dTMP kinase [Enterococcus faecalis TX1467]
          Length = 212

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG +GAGKT+ +  +   L +     +  TREPGG P AE  R V+L    D 
Sbjct: 2   QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+ 
Sbjct: 62  MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + V PD TI LD+  D GL+R+Q   +      +D  + + +  H++ R  +L +A
Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|254247997|ref|ZP_04941318.1| Thymidylate kinase [Burkholderia cenocepacia PC184]
 gi|124872773|gb|EAY64489.1| Thymidylate kinase [Burkholderia cenocepacia PC184]
          Length = 206

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R         +   D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVLAAL 206


>gi|241761931|ref|ZP_04760016.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241373611|gb|EER63183.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 216

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FIS EG EG GK+T I LL   L+ K    V  TREPGG    +A RH+LL   +  +
Sbjct: 10  GYFISLEGGEGVGKSTQIRLLVAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDLHRW 69

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++FAAAR +HV  VI+PAL EGK ++CDRF+DSS AYQG+        +  L  
Sbjct: 70  TNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQEDIRCLHR 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I  Q ++PD T +L LP   G++R Q R    +    + FE++ +  H+K    FL +A 
Sbjct: 130 IGSQGILPDRTFLLTLPEGEGIRRAQER----DKNKGNRFEQRTIDYHKKVNDSFLQLAA 185

Query: 183 NQPDRCHIVDSAHSFQSVATN 203
            +P+R  ++D++ + + V  +
Sbjct: 186 KEPERFRVIDASGNPEEVHRH 206


>gi|152964459|ref|YP_001360243.1| dTMP kinase [Kineococcus radiotolerans SRS30216]
 gi|151358976|gb|ABS01979.1| dTMP kinase [Kineococcus radiotolerans SRS30216]
          Length = 662

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 8/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVD 60
            G F++ EG +G+GKTT  +LL  +L+ + ++V VTREPGGT      R VLL+      
Sbjct: 446 GGCFVALEGGDGSGKTTQATLLAEWLRERGHEVVVTREPGGTATGRELREVLLNHRGEEQ 505

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA++FAA R  HV  V+RP L  G ++L DR++DSS AYQG         +++L
Sbjct: 506 PLSPRAEALLFAADRAQHVAEVVRPGLDRGAVVLTDRYVDSSLAYQGAGRDLPAAEVETL 565

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              + Q ++PD T++LD+                  A  D  E +    H + R+ FL +
Sbjct: 566 STWATQGLLPDLTVVLDVDPAT------AARRRAGRAADDRMEAESQAFHARVREQFLLL 619

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P R  ++D++ S + V   +   +   +
Sbjct: 620 AARDPARYLVLDASTSPEVVQQRLREHLAPRL 651


>gi|107028928|ref|YP_626023.1| thymidylate kinase [Burkholderia cenocepacia AU 1054]
 gi|116689914|ref|YP_835537.1| thymidylate kinase [Burkholderia cenocepacia HI2424]
 gi|170733252|ref|YP_001765199.1| thymidylate kinase [Burkholderia cenocepacia MC0-3]
 gi|123070937|sp|Q1BH55|KTHY_BURCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221725|sp|A0K817|KTHY_BURCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487584|sp|B1JTS0|KTHY_BURCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|105898092|gb|ABF81050.1| thymidylate kinase [Burkholderia cenocepacia AU 1054]
 gi|116648003|gb|ABK08644.1| thymidylate kinase [Burkholderia cenocepacia HI2424]
 gi|169816494|gb|ACA91077.1| dTMP kinase [Burkholderia cenocepacia MC0-3]
          Length = 206

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R   R ++R     D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVLAAL 206


>gi|256616735|ref|ZP_05473581.1| thymidylate kinase [Enterococcus faecalis ATCC 4200]
 gi|256596262|gb|EEU15438.1| thymidylate kinase [Enterococcus faecalis ATCC 4200]
 gi|315032614|gb|EFT44546.1| thymidylate kinase [Enterococcus faecalis TX0017]
 gi|315143843|gb|EFT87859.1| thymidylate kinase [Enterococcus faecalis TX2141]
          Length = 212

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG +GAGKT+ +  +   L +     +  TREPGG P AE  R V+L    D 
Sbjct: 2   QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+ 
Sbjct: 62  MDERTEALLYAAARRQHLVEKIFPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + V PD TI LD+  D GL+R+Q   +      +D  + + +  H++ R  +L +A
Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|220926669|ref|YP_002501971.1| thymidylate kinase [Methylobacterium nodulans ORS 2060]
 gi|219951276|gb|ACL61668.1| thymidylate kinase [Methylobacterium nodulans ORS 2060]
          Length = 225

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 3/188 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+ EG EGAGK+T I+ L   L+  + +V  TREPGG+P AE  R  LL+    + G
Sbjct: 8   GVFITVEGGEGAGKSTQIARLAERLRAGDREVITTREPGGSPRAEQIRTALLAGAAKDHG 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++F+AARLDH+  +IRPAL  G ++LCDRF DS+ AYQG         + +L+ +
Sbjct: 68  PFAEALLFSAARLDHLNTLIRPALARGAVVLCDRFADSTRAYQGAAGGIDPQEVAALERV 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V    PD T+ILDLP ++GL R + R S   S   D FE + +  H++ R+ F  IA  
Sbjct: 128 VVGPTRPDLTLILDLPPELGLARARRRAS---SPGPDRFEAETLSFHQRLREAFRAIAAQ 184

Query: 184 QPDRCHIV 191
           +P+RC ++
Sbjct: 185 EPERCVLI 192


>gi|94310766|ref|YP_583976.1| thymidylate kinase [Cupriavidus metallidurans CH34]
 gi|254808302|sp|Q1LMB9|KTHY_RALME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|93354618|gb|ABF08707.1| thymidylate kinase (dTMP kinase) [Cupriavidus metallidurans CH34]
          Length = 200

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEGI+GAGK+THI  +   L+ +  +V  TREPGGTP  E  R +LL     + 
Sbjct: 2   RGKFITFEGIDGAGKSTHIEWVAERLRAR-ANVVTTREPGGTPLGEDLRQLLLH---RKM 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         L +L++
Sbjct: 58  HLETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQGGGRGLALDRLATLEQ 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T++ D+P++    R+        +   D FE +     E+ R  +L  A 
Sbjct: 118 WVQSGLQPDLTLLFDVPLETASARLAG------AREPDKFEAESRAFFERTRTEYLRRAA 171

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P R  ++D+  S   +   +  I+  L
Sbjct: 172 EAPQRFRVIDATRSIDEIRVALEEIIATL 200


>gi|307288618|ref|ZP_07568599.1| thymidylate kinase [Enterococcus faecalis TX0109]
 gi|306500372|gb|EFM69708.1| thymidylate kinase [Enterococcus faecalis TX0109]
 gi|315165331|gb|EFU09348.1| thymidylate kinase [Enterococcus faecalis TX1302]
          Length = 212

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG +GAGKT+ +  +   L +     +  TREPGG P AE  R V+L    D 
Sbjct: 2   QGIFITFEGPDGAGKTSVLKEVAERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL  G ++LCDRF DSS AYQG         + S+ 
Sbjct: 62  MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFADSSLAYQGAGRRIGIAPIASIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + V PD TI LD+  D GL+R+Q   +      +D  + + +  H++ R  +L +A
Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|12722080|gb|AAK03757.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 243

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 8/216 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EGIEGAGKTT    + R L     +D+  TREPGGTP AE  R ++     
Sbjct: 35  MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 94

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L +
Sbjct: 95  EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHLLHT 154

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L++  + E  PD T+ LD+   +GL R + R        LD  E++++    + RQ + +
Sbjct: 155 LKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQE 208

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + R+ P +   +D++ +   VA ++ + +   +  R
Sbjct: 209 LVRHNP-KAVTIDASQTMSKVAEDVESAIETWLTTR 243


>gi|84516820|ref|ZP_01004178.1| thymidylate kinase [Loktanella vestfoldensis SKA53]
 gi|84509288|gb|EAQ05747.1| thymidylate kinase [Loktanella vestfoldensis SKA53]
          Length = 202

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 6/208 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+FEGI+G+GK+T    L ++L  + +DV +TREPGG+  AE  R +LL+   D
Sbjct: 1   MTRPRFITFEGIDGSGKSTQARRLAQWLGDQGHDVILTREPGGSQGAEEIRQLLLTGDTD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  I PAL  GK ++ DRF DS+  YQG         +D+L
Sbjct: 61  RWSAETEILLFTAARRDHLEKTILPALAAGKTVVSDRFADSTRVYQGATRGDLRAKVDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             + +    PD T ++D+     L+R   R S       D FE   +   E  R  FL +
Sbjct: 121 HALMI-GREPDLTFVIDMDPATALERGLARRS-----GEDRFEDFGLPFQETLRHGFLAL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           AR +  RC ++D   +   +A+++   +
Sbjct: 175 ARAEAQRCVLIDGNRTPDQIASDVAAHL 202


>gi|257091001|ref|ZP_05585362.1| thymidylate kinase [Enterococcus faecalis CH188]
 gi|312902587|ref|ZP_07761793.1| thymidylate kinase [Enterococcus faecalis TX0635]
 gi|256999813|gb|EEU86333.1| thymidylate kinase [Enterococcus faecalis CH188]
 gi|310634257|gb|EFQ17540.1| thymidylate kinase [Enterococcus faecalis TX0635]
 gi|315162072|gb|EFU06089.1| thymidylate kinase [Enterococcus faecalis TX0645]
 gi|315579603|gb|EFU91794.1| thymidylate kinase [Enterococcus faecalis TX0630]
          Length = 212

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG +GAGKT+ +  +   L +     +  TREPGG P AE  R V+L    D 
Sbjct: 2   QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG       + + S+ 
Sbjct: 62  MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIVPIASIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + V PD TI LD+  D GL+R+Q   +      +D  + + +  H++ R  +L +A
Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206


>gi|294340171|emb|CAZ88543.1| putative thymidylate kinase [Thiomonas sp. 3As]
          Length = 215

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 9/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFIS EGI+GAGK+T +  +   L+  N  V +TREPGGT   E  R +LL    + 
Sbjct: 8   RPGLFISLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLH---ET 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++  AAR +HV  VI PAL+ G  ++CDRF  ++ AYQG         L++L 
Sbjct: 65  MRPATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALA 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PDC I++D+P ++  +R++       +   D FE++ V    + R  +L  A
Sbjct: 125 RWVHPGLCPDCIILIDVPPEVAAQRLEQ------TRQRDRFEQESVDFFARVRANYLQQA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            + P++  ++D   + ++V   I   + +++Q+
Sbjct: 179 ASSPEKWRVIDGTQTPEAVQKTITGYLNKVLQE 211


>gi|75675656|ref|YP_318077.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255]
 gi|123613520|sp|Q3SSL6|KTHY_NITWN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|74420526|gb|ABA04725.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255]
          Length = 230

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 84/190 (44%), Positives = 120/190 (63%), Gaps = 3/190 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEG EG+GK+T I +L   LQ       VTREPGG+P AE  RH++LS     
Sbjct: 11  QRGRFITFEGGEGSGKSTQIRILAERLQAAKLRAIVTREPGGSPGAEIIRHLVLSGVGKL 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            GA+AE ++FAAAR DHV  VI+PAL +G  +LCDRF DS+  YQG+  +     L++++
Sbjct: 71  LGADAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRVYQGQLGNVLPGVLNAME 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++ ++ PD T+ILD+PV++GL+R   R   R S   D FE +D+  H K R  +  IA
Sbjct: 131 RVTIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDIAFHRKLRDAYRAIA 187

Query: 182 RNQPDRCHIV 191
            + P RC ++
Sbjct: 188 ASDPQRCVVI 197


>gi|257867902|ref|ZP_05647555.1| thymidylate kinase [Enterococcus casseliflavus EC30]
 gi|257874231|ref|ZP_05653884.1| thymidylate kinase [Enterococcus casseliflavus EC10]
 gi|257876795|ref|ZP_05656448.1| thymidylate kinase [Enterococcus casseliflavus EC20]
 gi|257801985|gb|EEV30888.1| thymidylate kinase [Enterococcus casseliflavus EC30]
 gi|257808395|gb|EEV37217.1| thymidylate kinase [Enterococcus casseliflavus EC10]
 gi|257810961|gb|EEV39781.1| thymidylate kinase [Enterococcus casseliflavus EC20]
          Length = 215

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ I  L   LQ      +  TREPGG   AE  R ++L    +E
Sbjct: 2   NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R+Q       +   D  + + +  H++ R  +L +A
Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIQEN----RAHQYDRLDSEGLEFHQRVRHAYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R H +D+    Q V  +  + + E
Sbjct: 178 EENPVRIHKIDARMGLQEVVESSYSAIVE 206


>gi|169632744|ref|YP_001706480.1| thymidylate kinase [Acinetobacter baumannii SDF]
 gi|184159124|ref|YP_001847463.1| thymidylate kinase [Acinetobacter baumannii ACICU]
 gi|260556574|ref|ZP_05828792.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606]
 gi|294841418|ref|ZP_06786101.1| thymidylate kinase [Acinetobacter sp. 6014059]
 gi|229487548|sp|B2HWQ7|KTHY_ACIBC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229487549|sp|B0VTL6|KTHY_ACIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169151536|emb|CAP00303.1| thymidylate kinase [Acinetobacter baumannii]
 gi|183210718|gb|ACC58116.1| Thymidylate kinase [Acinetobacter baumannii ACICU]
 gi|260409833|gb|EEX03133.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606]
 gi|322509038|gb|ADX04492.1| tmk [Acinetobacter baumannii 1656-2]
 gi|323519020|gb|ADX93401.1| thymidylate kinase [Acinetobacter baumannii TCDC-AB0715]
          Length = 199

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S   V    L  +
Sbjct: 174 EPERIKRLDATQSPDQVFEQALQYL 198


>gi|118602262|ref|YP_903477.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166223114|sp|A1AVP9|KTHY_RUTMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118567201|gb|ABL02006.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 205

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ +G+EG+GK+T I  +  +L  K  +V +TREPGGT   E  R +LLS  + 
Sbjct: 1   MQRGKFITIDGVEGSGKSTQIDFICDYLVTKKINVILTREPGGTELGEKIRTLLLSTDIQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++  AAR +H+   I P+L +G  +L DRF D+SYAYQG         +  L
Sbjct: 61  SIHGDTELLLLFAARNEHIRTKIIPSLEKGDWVLSDRFTDASYAYQGGGRGLSIERITQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  +Q+  PD T++LD+ V +G+ RV++R         D  E +     ++ R  +++ 
Sbjct: 121 EKWVLQDFTPDVTLLLDVSVALGMSRVESR------GRKDRIELETNDFFKRVRNSYIER 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++  P R  ++D++ + +  A  I  I+ +++
Sbjct: 175 SKQFPKRIKLIDASKTLEQTAQQI-KIILQVL 205


>gi|206560328|ref|YP_002231092.1| thymidylate kinase [Burkholderia cenocepacia J2315]
 gi|229487614|sp|B4EBJ2|KTHY_BURCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|198036369|emb|CAR52265.1| putative thymidylate kinase [Burkholderia cenocepacia J2315]
          Length = 206

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      L+  L      V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLAWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R         +   D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFSRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  S   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVLAAL 206


>gi|73748588|ref|YP_307827.1| thymidylate kinase [Dehalococcoides sp. CBDB1]
 gi|289432614|ref|YP_003462487.1| thymidylate kinase [Dehalococcoides sp. GT]
 gi|123619641|sp|Q3ZXD8|KTHY_DEHSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73660304|emb|CAI82911.1| thymidylate kinase [Dehalococcoides sp. CBDB1]
 gi|288946334|gb|ADC74031.1| thymidylate kinase [Dehalococcoides sp. GT]
          Length = 208

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 7/208 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++      +T EPGG+ + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A+R   ++NVI+PAL +GKI++CDR+ DS+ AYQG         +  +  ++
Sbjct: 63  LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQGYGRGLDLDTVKCVNSLA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD TI LD+     L R       +     D FE ++   H++ R  F  I   +
Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIYATE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           PDR   +D++     + + I   V  L+
Sbjct: 176 PDRFLKLDASLPQSEIFSRIKQRVTILL 203


>gi|83949598|ref|ZP_00958331.1| thymidylate kinase [Roseovarius nubinhibens ISM]
 gi|83837497|gb|EAP76793.1| thymidylate kinase [Roseovarius nubinhibens ISM]
          Length = 210

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 6/211 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G+FISFEGI+G+GK+T +  L   LQ +   V +TREPGG+P AE  R ++L    D 
Sbjct: 5   RAGVFISFEGIDGSGKSTQVRRLADHLQARGLRVRLTREPGGSPGAEDIRKLVLEGAGDR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  E E ++F AAR DH+E VI PAL  G++++CDRF DS+  YQG   +     +D L 
Sbjct: 65  WSPETEILLFTAARRDHMERVILPALAAGEVVICDRFADSTRMYQGLASAEMRALVDQLH 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ +    PD T+++D+  ++GL R   R    E      FE + +    + R  FLD+A
Sbjct: 125 DLMIGR-EPDLTLLIDMDPEVGLARALARQGGEE-----RFEGRGIEWQRRMRAGFLDLA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              PDR  +VD A    +VA  I  +    +
Sbjct: 179 EAHPDRIRVVDGAGEIDAVAGQIATLTDAAL 209


>gi|309810854|ref|ZP_07704655.1| dTMP kinase [Dermacoccus sp. Ellin185]
 gi|308435160|gb|EFP58991.1| dTMP kinase [Dermacoccus sp. Ellin185]
          Length = 268

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 8/210 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++FEG +GAGKTT I     +L+    +V +TREPGGTP     R +LL    D+  
Sbjct: 56  GLFVTFEGGDGAGKTTQIERAAAWLRELGREVVITREPGGTPLGVEIRRLLLHG--DDVA 113

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           + AEA+++AA R  HVE ++RPAL  G ++L DR++DSS AYQG   +     ++S+   
Sbjct: 114 SRAEALLYAADRAHHVETLVRPALARGAVVLQDRYIDSSIAYQGAGRALAADDVESISRW 173

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + PD T+++D+  ++  +R   R         D  ER+    H + R+ FL +A  
Sbjct: 174 ATRGLTPDVTVLIDVSPEVARERRGAR------GAEDRLEREADDFHTRVREHFLRLAAR 227

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              R  ++D+  S   +   +   + +L++
Sbjct: 228 DEARYLVLDAGRSRDDLTAAVRTRLEQLLE 257


>gi|113461628|ref|YP_719697.1| thymidylate kinase [Haemophilus somnus 129PT]
 gi|123031486|sp|Q0I5J0|KTHY_HAES1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|112823671|gb|ABI25760.1| thymidylate kinase [Haemophilus somnus 129PT]
          Length = 210

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 70/217 (32%), Positives = 119/217 (54%), Gaps = 8/217 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EG+EGAGK++   ++   L+    ++V  TREPGGTP AE  R+++     
Sbjct: 1   MKTGKFIVIEGLEGAGKSSTHQVVVNTLKEFGIHEVVFTREPGGTPLAEKLRYLIKHEVE 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +   A+AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         + +
Sbjct: 61  ELVTAKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDLSSQAYQGGGRGLDQHLMTT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+   + +  PD T+ LD+  +IGL RV+ R        LD  E++++    + R  +L 
Sbjct: 121 LKNAVLGDFKPDFTLYLDIEPEIGLARVRGR------GELDRIEQQNLDFFHRTRARYLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           + +  P+   ++++    + V  +I   V + +++ V
Sbjct: 175 LVQQDPN-AVLINADQPIELVQQDIRKAVQKFIEENV 210


>gi|224541623|ref|ZP_03682162.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525461|gb|EEF94566.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM
           15897]
          Length = 211

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 6/208 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG+GKTT   +L +    + Y++  +REPGG   AE  R V+      +  A
Sbjct: 10  LFITFEGGEGSGKTTIAKMLHKQFIEEGYNITFSREPGGVDIAEQIRDVITDVNNTKMDA 69

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  H+   + P L E  I++CDRF+DSS  YQG         + ++   +
Sbjct: 70  RTEALLYAASRRQHLVEKVLPVLKEDGIVICDRFIDSSLVYQGIGRGIGVDNIYNMNLFA 129

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD TI  D+  ++ LKR+           ++  + + +  H K  + +  I    
Sbjct: 130 TDGILPDLTIFFDVKPEVALKRITG------DREVNRLDLESLDFHHKVYEGYQMICDKF 183

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           PDR   VD++   + V   +  IV + +
Sbjct: 184 PDRIVKVDASLPVEEVYRQVYEIVKDRL 211


>gi|284028576|ref|YP_003378507.1| thymidylate kinase [Kribbella flavida DSM 17836]
 gi|283807869|gb|ADB29708.1| thymidylate kinase [Kribbella flavida DSM 17836]
          Length = 661

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 9/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GLFI+FEG EGAGK+T  +LL ++L+ +   V +TREPG T   +  R ++L     +
Sbjct: 456 TTGLFIAFEGGEGAGKSTQSALLVKWLEERGQHVLLTREPGATDLGKTLRQIVLDPATGD 515

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA + +HV++VI+PAL  G +++ DR++DS+ AYQG         ++ + 
Sbjct: 516 ISHRAEALIYAADKAEHVDSVIKPALKAGTVVITDRYVDSALAYQGSGRDLDLADVERVN 575

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +  ++ P+ TI+LDLP   GL R + R         D  E +    HE+ R  FL++A
Sbjct: 576 RWATDDLRPNLTILLDLPPKSGLGRFEER---------DRIEAQSADFHERVRAAFLELA 626

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +P    ++D+    + +A  I   +  ++ K
Sbjct: 627 AAEPQHYLVLDATQDREQLAAQIQARLLPMLPK 659


>gi|226952159|ref|ZP_03822623.1| thymidylate kinase [Acinetobacter sp. ATCC 27244]
 gi|226837095|gb|EEH69478.1| thymidylate kinase [Acinetobacter sp. ATCC 27244]
          Length = 201

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 8/208 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ +++  +V +TREPGGTP AE  R +LL+   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GKI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALEAGKIVLSDRFTDASFAYQCSGRGLSQEKLQLLNQT 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MP+ T  LD P+++G+ R + R        LD FE++ +    K R  +  + + 
Sbjct: 121 FV-AKMPNITFWLDAPIELGMTRARER------GALDRFEQEKLSFFAKVRAGYETLWQA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +P+R   +++  +   V    LN + +L
Sbjct: 174 EPERIKRLNATQNADLVFEEALNYIKQL 201


>gi|163789941|ref|ZP_02184377.1| thymidylate kinase [Carnobacterium sp. AT7]
 gi|159874881|gb|EDP68949.1| thymidylate kinase [Carnobacterium sp. AT7]
          Length = 211

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+ EG +GAGKT+ I  L   L +    ++  TREPGG+  AE  R ++L+    E
Sbjct: 2   RGIFITIEGPDGAGKTSVIKKLIPMLVETIQQEIVATREPGGSRIAEEIRELILNPENIE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R  H+   I PAL  GK+++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDIRTEALLYAAGRRQHLVEKIIPALETGKVVICDRFVDSSLAYQGVARGIGISEVAEIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + PD T+ LD+   +GL+R+      R     D  +++ +  HEK R  +L IA
Sbjct: 122 QFATDNLSPDLTLYLDIEAHLGLERINQNKDNR---QFDRLDQETLEFHEKVRSAYLAIA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + Q +R   +D++   + V  +    + + ++
Sbjct: 179 KEQSERIVQIDASQELEKVVADCYETIIKRIR 210


>gi|255320788|ref|ZP_05361963.1| thymidylate kinase [Acinetobacter radioresistens SK82]
 gi|255302165|gb|EET81407.1| thymidylate kinase [Acinetobacter radioresistens SK82]
          Length = 202

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 8/208 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  +    ++K  ++ +TREPGGTP AE  R +LLS   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTPLAEQIRALLLSVSHDEKMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GK +LCDRF D+S+AYQ          L  L + 
Sbjct: 61  DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLAVLNQS 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T+ LD PV++G+ R + R        LD FE++ V   EK R  +  + + 
Sbjct: 121 FV-SRMPDITLWLDAPVELGMSRARER------GALDRFEQEKVSFFEKVRAGYTRLWQQ 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
            P+R   +D+  + + V    L  + +L
Sbjct: 174 HPERIKRLDATQAPEKVLEQALEQIGKL 201


>gi|327438112|dbj|BAK14477.1| thymidylate kinase [Solibacillus silvestris StLB046]
          Length = 209

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI+FEG EGAGKT+ +  +   L+ +  +  +TREPGG   AE  R ++L     
Sbjct: 1   MQRNLFITFEGGEGAGKTSVLKAIGERLKEERIEALLTREPGGIEIAEKIRTIILDPAHT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AAAR  H    I PAL EGK +LCDRF+DSS AYQG         + S+
Sbjct: 61  EMHERTEALLYAAARAQHFYEKIVPALEEGKHVLCDRFIDSSLAYQGYAREIGVDDVLSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E ++ + +PD TI  ++  + GL R+        S  ++  + + +  H+K  + + + 
Sbjct: 121 NEFAIGKRLPDVTIFFNIAPERGLARIHA----TRSDEINRLDAEGLAFHQKVYEGYEEA 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            R  P+R  +V++  + + V   +  I+  L+
Sbjct: 177 IRRYPERFKMVNADQALEQVIEEVWGILNPLL 208


>gi|1074411|pir||A64153 dTMP kinase (EC 2.7.4.9) - Haemophilus influenzae (strain Rd KW20)
          Length = 237

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 29  KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 88

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 89  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 148

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 149 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 202

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 203 KDNP-KAVVINAEQSIELVQADIESAVKNW 231


>gi|323706279|ref|ZP_08117845.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534331|gb|EGB24116.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 205

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+FEGI+G+GKTT I+LLK++L     D+ V REPGGT   E  R +LL    +
Sbjct: 1   MYKGKLITFEGIDGSGKTTQINLLKKYLLEIGRDIVVLREPGGTAIGEKIREILLDKKNN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++AA+R + V+ VI P+L +GKI++ DRF+DSS  YQG         ++ +
Sbjct: 61  -IVPSAEALLYAASRAELVKEVIIPSLNDGKIVILDRFVDSSIVYQGYARGLGVEVVEEI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I++  ++PD T+ LD+     L R+  R         D  E +D   HEK  + ++ +
Sbjct: 120 NSIAIDGLVPDLTVYLDIKPKDTLMRIDRRKDK------DRLEIEDAEFHEKVYEGYMKL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +++P R  IVD+ H    +   I++ V +++
Sbjct: 174 IKSKPGRYFIVDATHDIYYIQKVIIDEVSKII 205


>gi|227519453|ref|ZP_03949502.1| thymidylate kinase [Enterococcus faecalis TX0104]
 gi|227073065|gb|EEI11028.1| thymidylate kinase [Enterococcus faecalis TX0104]
          Length = 212

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 5/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG +GAGKT+ +  +   L +     +  TREPGG P AE  R V+L    D 
Sbjct: 2   QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+ 
Sbjct: 62  MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + V PD TI LD+  D GL+R+Q   +      +D  + + +  H++ R  +L +A
Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P R   +D+  S + V       +
Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAI 204


>gi|78066662|ref|YP_369431.1| thymidylate kinase [Burkholderia sp. 383]
 gi|123568272|sp|Q39FH9|KTHY_BURS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77967407|gb|ABB08787.1| thymidylate kinase [Burkholderia sp. 383]
          Length = 206

 Score =  245 bits (626), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLS 56
           M SG FI+FEGI+GAGKTTH+      LQ         V VTREPGGT   E  R +LL+
Sbjct: 1   MASGKFITFEGIDGAGKTTHLQWFCERLQGKLAAAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R         +   D FE +      + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFSRTRSE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVD+  +   +   +  ++  L
Sbjct: 172 YLRRAEEAPHRFAIVDATQTIPEIRHQLERVLAAL 206


>gi|113867580|ref|YP_726069.1| thymidylate kinase [Ralstonia eutropha H16]
 gi|122946913|sp|Q0KBC0|KTHY_RALEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|113526356|emb|CAJ92701.1| thymidylate kinase (dTMP kinase) [Ralstonia eutropha H16]
          Length = 203

 Score =  244 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G FI+FEGI+GAGK+THI  +   L+ +     V  TREPGGT   E  R +LL     
Sbjct: 2   RGKFITFEGIDGAGKSTHIDWVADRLRARSDIAGVVTTREPGGTSLGEDLRQILLH---R 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  AAR +H+  VI PAL  GK ++ DRF D+++AYQG         L+ L
Sbjct: 59  KMHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++ D+P++   +R+        +   D FE +     ++ R  +L  
Sbjct: 119 EDWVQGGLQPDLTLLFDVPLETASERLAG------ARAPDRFESESRAFFQRTRDEYLRR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R  ++D+  S   +   +  I+
Sbjct: 173 AAQSPQRFRVIDATRSIADIRDELEKII 200


>gi|295099397|emb|CBK88486.1| thymidylate kinase [Eubacterium cylindroides T2-87]
          Length = 210

 Score =  244 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+F++FEG +G+GKTT    +   L++  YDV  TREPGG+  AE+ R++LL     
Sbjct: 1   MKQGVFLTFEGNDGSGKTTVCKAICEELKKLGYDVVYTREPGGSKIAESIRNILLDVENT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA+++AA+R  H+++ + PAL    I+LCDRF+DSS AYQG         +  +
Sbjct: 61  GMDPRTEALLYAASRRQHLKDRVLPALKNKSIVLCDRFVDSSLAYQGYARDLGMQEVYDI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++   MP  T  L + ++ G KR+  R         +  + +    H+K R+ +  +
Sbjct: 121 NQFAIDGCMPIKTFFLSVSIETGQKRMDLRGDK------NRLDLEQSDFHKKVREGYAKL 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               P+R  ++D+    + V  N LN V +++ +
Sbjct: 175 IEMYPERICVIDAEPELKVVVKNTLNEVMKVIHE 208


>gi|270308091|ref|YP_003330149.1| thymidylate kinase [Dehalococcoides sp. VS]
 gi|270153983|gb|ACZ61821.1| thymidylate kinase [Dehalococcoides sp. VS]
          Length = 207

 Score =  244 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++   +  +T EPGGT + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKLGLECVLTHEPGGTRSGDKITRLLKWSKEENISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A+R   ++NVI+PAL +G I++CDR+ DS+ AYQG     +   +  +  ++
Sbjct: 63  LTELLLFNASRSILIDNVIKPALQDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD TI LD+     L R       +     D FE ++   H++ R  F  IA  +
Sbjct: 123 NGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           P+R   +D++     +A  I   V  L++
Sbjct: 176 PNRFLKLDASLPQSELARCIRQRVNVLLK 204


>gi|239994633|ref|ZP_04715157.1| thymidylate kinase [Alteromonas macleodii ATCC 27126]
          Length = 216

 Score =  244 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  EG+EGAGK++ I L+ + L+     V  TREPGGTP AEA R  +     +  
Sbjct: 2   RGKFIVVEGLEGAGKSSVIGLIVQALKGAGKRVEQTREPGGTPMAEAIRECVKHDWDETV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR+  + N I P+L  G  ++ DR   SS AYQG         + ++ +
Sbjct: 62  SEETELLLMYAARVQLLTNKILPSLDAGAWVVGDRHDLSSQAYQGGGRGVSGKTMSAISD 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+++   PD T+ LD+   +GL+R + R        LD  E+  +   E+ R  +L +A+
Sbjct: 122 IALKGFKPDLTLYLDVEPAVGLERARGR------GELDRIEQAGLAFFERTRAKYLSLAK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +   +V +    + V  +++ I+ + V
Sbjct: 176 QD-ESIVVVSAMQPMEKVHQDVIAIINDYV 204


>gi|134094620|ref|YP_001099695.1| thymidylate kinase [Herminiimonas arsenicoxydans]
 gi|166221746|sp|A4G4Y1|KTHY_HERAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|133738523|emb|CAL61568.1| thymidylate kinase (dTMP kinase) [Herminiimonas arsenicoxydans]
          Length = 204

 Score =  244 bits (625), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+FEGI+GAGK+TH+S +   L+    +V VTREPGGT   EA R +LL    +
Sbjct: 1   MTKAKFITFEGIDGAGKSTHLSFVADLLRASKKNVVVTREPGGTSLGEALRTILLH---E 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  AAR +H+  +I PAL  G  ++ DRF D+++AYQG         L  L
Sbjct: 58  KMHLETEALLMFAARREHIAQLIEPALARGDWVISDRFTDATFAYQGGGRKLDRQKLSVL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     + PD T++ D+P+D+   R+        +  LD FE++        R  +L  
Sbjct: 118 EQWVHPHLQPDLTLLFDVPLDVARARLDA------TRTLDKFEQEQADFFAATRAEYLRR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  I+DS  +  ++   + +I+  L
Sbjct: 172 AAEFPQRFRIIDSTQAIATIQEQLRDIIAGL 202


>gi|187923929|ref|YP_001895571.1| thymidylate kinase [Burkholderia phytofirmans PsJN]
 gi|229470188|sp|B2T436|KTHY_BURPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187715123|gb|ACD16347.1| dTMP kinase [Burkholderia phytofirmans PsJN]
          Length = 206

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+S  +  L++K       V +TREPGGTP  E  R ++L 
Sbjct: 1   MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   E EA++  A R  H+  VI PAL  G  +L DRF D+++AYQG         
Sbjct: 61  Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ DL  +I  +R         +   D FE + V    + R  
Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFESESVAFFNRTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +L  A   P R  I+DSA S   +   +  ++
Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIVQIQRKLEELI 203


>gi|17232200|ref|NP_488748.1| thymidylate kinase [Nostoc sp. PCC 7120]
 gi|23821788|sp|Q8YN62|KTHY_ANASP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|17133845|dbj|BAB76407.1| thymidylate kinase [Nostoc sp. PCC 7120]
          Length = 211

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 6/215 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG+EG GKT+ + L   +LQ     V +TREPGGT      R +LL    D+ 
Sbjct: 2   GGRFIVFEGVEGCGKTSQMQLCAEWLQSLGISVVLTREPGGTELGLDLRRLLLQKAEDKP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            AE  E +++AA R  HV   ++P L +GK +LCDR++DS+ AYQG   +     +  L 
Sbjct: 62  IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +I+   +  D TI LD+ V++GL R +      ++  LD  E++ +  H + +Q + D+A
Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----DNVGLDRIEQETIAFHRRVQQGYADLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            + P R   VD   S ++V   I  I+   +++ +
Sbjct: 177 ASSPKRIIRVDGQLSKETVHKTIQEILSVHLKQWL 211


>gi|134295921|ref|YP_001119656.1| thymidylate kinase [Burkholderia vietnamiensis G4]
 gi|166221731|sp|A4JEW8|KTHY_BURVG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|134139078|gb|ABO54821.1| thymidylate kinase [Burkholderia vietnamiensis G4]
          Length = 206

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ K    +  V VTREPGGTP  EA R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGDRQVVVTREPGGTPLGEALREMLLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R         +   D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASERRGA------ARAPDKFESETDAFFTRTRDE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A+  P R  IVD+  +   +   +  ++  L
Sbjct: 172 YLRRAQEAPHRFTIVDATQTIPEIRGRLERVLAAL 206


>gi|312869713|ref|ZP_07729860.1| dTMP kinase [Lactobacillus oris PB013-T2-3]
 gi|311094762|gb|EFQ53059.1| dTMP kinase [Lactobacillus oris PB013-T2-3]
          Length = 218

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLSCGVD 60
            G FISFEG +GAGKT+ +  +++ L  +   D V  TREPGG   +E  R VL S    
Sbjct: 6   QGKFISFEGPDGAGKTSVLRAIQQQLVDQLGADRVMYTREPGGNHISEQIRQVLFSPENT 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++FAAAR  H+ + I P L  GK++LCDR++DSS AYQG         +  +
Sbjct: 66  DMDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRHLGEQVIWQM 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++  ++PD TI LD+  ++GL+R+        +  ++  + + +  H+  R  +L +
Sbjct: 126 NQFAIDGLLPDLTIYLDVESEVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRL 181

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +  PDR  ++D+      V   +   + +
Sbjct: 182 YQAHPDRIKLIDAGQPLDQVIAAVAQTIHQ 211


>gi|328906772|gb|EGG26544.1| dTMP kinase [Propionibacterium sp. P08]
          Length = 209

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+  EG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 7   GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EG++++CDR++DS+ AYQG         +  L  
Sbjct: 67  CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FL +A 
Sbjct: 127 WATVGLVPDVTVLLDVDPCEGTAKIAAK---------DRLEAAGDEFHLRVRQHFLSLAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  + + ++  I + V  L+ +
Sbjct: 178 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 209


>gi|88810823|ref|ZP_01126080.1| thymidylate kinase [Nitrococcus mobilis Nb-231]
 gi|88792453|gb|EAR23563.1| thymidylate kinase [Nitrococcus mobilis Nb-231]
          Length = 222

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 6/210 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EGIEGAGKT+ +  L + L+ +  +  +TREPGGT   EA R +LL         
Sbjct: 14  RFITVEGIEGAGKTSCLDYLAKLLRNQAIEAVLTREPGGTSLGEAVRALLLDHRFRGMAG 73

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++  AAR  H+  VIRPAL  G+ ++CDRF D++YAYQG   +     +  L+  +
Sbjct: 74  DAETLLVFAARAQHLAEVIRPALAAGQWVVCDRFTDATYAYQGGGRALGATRVGLLEHWA 133

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             E+ PD T+ LD+PV +GL R+ +R +      LD FE +     E+ R ++L+  R +
Sbjct: 134 QSELRPDRTLYLDVPVTVGLGRIASRGN------LDRFESERQAFFERVRCVYLERCRAE 187

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           P R   +++  S ++V T I   + +L+  
Sbjct: 188 PQRMRRIEADGSREAVHTQIAAALADLLND 217


>gi|313835739|gb|EFS73453.1| thymidylate kinase [Propionibacterium acnes HL037PA2]
 gi|314928412|gb|EFS92243.1| thymidylate kinase [Propionibacterium acnes HL044PA1]
 gi|314970109|gb|EFT14207.1| thymidylate kinase [Propionibacterium acnes HL037PA3]
          Length = 215

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F+  EG +GAGKTT   LL ++L  +     +TREPG +   +  R ++LS      
Sbjct: 13  GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + AEA+++ A +  HV+ V+ PAL EG++++CDR++DS+ AYQG         +  L  
Sbjct: 73  CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++PD T++LD+    G  ++  +         D  E      H + RQ FL +A 
Sbjct: 133 WATVGLVPDVTVLLDVDPCEGTAKIAAK---------DRLEAAGDEFHLRVRQHFLSLAA 183

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++++  + + ++  I + V  L+ +
Sbjct: 184 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 215


>gi|239630116|ref|ZP_04673147.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067265|ref|YP_003789288.1| thymidylate kinase [Lactobacillus casei str. Zhang]
 gi|239527728|gb|EEQ66729.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439672|gb|ADK19438.1| Thymidylate kinase [Lactobacillus casei str. Zhang]
          Length = 214

 Score =  244 bits (625), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 4/209 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ +  L   L++     +H+TREPGG   +E  R V+L      
Sbjct: 2   TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA+++AA+R  H+  VI+PAL +G I++CDRF+DSS AYQG         +  + 
Sbjct: 62  MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +   + P  T+ LD+PV +GL R+++  + R+    D  +++ +  HE+    ++ + 
Sbjct: 122 QFATAGLEPALTLYLDVPVQMGLDRIKSHQNERQY---DRLDQESLAFHERVHDAYMTLI 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + P R   +D+    + V       +  
Sbjct: 179 VDNPQRIVSIDATEPLEKVVAACFQTITR 207


>gi|184154763|ref|YP_001843103.1| thymidylate kinase [Lactobacillus fermentum IFO 3956]
 gi|227514030|ref|ZP_03944079.1| dTMP kinase [Lactobacillus fermentum ATCC 14931]
 gi|260663208|ref|ZP_05864100.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN]
 gi|238692945|sp|B2GAE1|KTHY_LACF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|183226107|dbj|BAG26623.1| thymidylate kinase [Lactobacillus fermentum IFO 3956]
 gi|227087616|gb|EEI22928.1| dTMP kinase [Lactobacillus fermentum ATCC 14931]
 gi|260552400|gb|EEX25451.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN]
          Length = 214

 Score =  244 bits (625), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FISFEG +GAGKT+ ++ ++  L  +    V  TREPGG P AE  R VLL      
Sbjct: 2   SGRFISFEGPDGAGKTSVLTAIRTGLVNQLGDQVVYTREPGGNPIAEQVRAVLLDKQNGA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA+R  HV   ++PAL  GK++LCDR+LDSS AYQG         +  L 
Sbjct: 62  MDDWTEALLYAASRRQHVVETLKPALEAGKLILCDRYLDSSIAYQGGGRELGIDRIWELN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  ++PD TI LDLPV+ GL R++       +  ++  + +    H + RQ +L +A
Sbjct: 122 QYAIDGLLPDLTIFLDLPVETGLARIEK----GRAETINRLDEQTTNFHRRVRQAYLTLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
              P+R   V++      V  ++ + + 
Sbjct: 178 ERFPERIVKVNADQELARVIEDVRSAIH 205


>gi|268315735|ref|YP_003289454.1| thymidylate kinase [Rhodothermus marinus DSM 4252]
 gi|262333269|gb|ACY47066.1| thymidylate kinase [Rhodothermus marinus DSM 4252]
          Length = 220

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ISFEGI+G GK+T   LL + L+   Y   + REPGGT  +E  R +LL   +D    
Sbjct: 1   MLISFEGIDGCGKSTQARLLAQRLETAGYRTLLVREPGGTELSERIRGLLLDPALD-IDP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEI 123
            AE ++F+AAR   V   IRPAL  G I+LCDRF DS+ AYQG      +  +L      
Sbjct: 60  FAELLLFSAARRQLVVERIRPALQAGYIVLCDRFYDSTTAYQGGGRGVVELAWLRDFNRR 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++PD T  LD+P+++ L R        ++   D  ER D    E+ R  +  +A  
Sbjct: 120 VTDGLVPDRTYWLDVPLEVALAR------RDQAGDPDRMERADPAFFERVRATYAQLATE 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +PDR   +D+  S +++   I N V  L+
Sbjct: 174 EPDRILRLDATASIETLHETIWNDVQRLL 202


>gi|189485350|ref|YP_001956291.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
 gi|170287309|dbj|BAG13830.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
          Length = 211

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 1/212 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI+FEG EG+GKTTH  LLK++L+++ Y+V +TREPGGT  AEA R +LL+   +
Sbjct: 1   MKKNLFITFEGGEGSGKTTHSLLLKKYLEKRGYEVLLTREPGGTILAEAVRRILLNPDSN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +E  ++ AAR  HVE  + PAL  GK ++CDRF D++ AYQG         +DSL
Sbjct: 61  -IVPLSELFLYEAARAQHVEEFVFPALNAGKAVICDRFTDATVAYQGYGRKLNLQLIDSL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + P  TI LD+    GL R +    L      D  ER+ +  HE  R+ +L  
Sbjct: 120 NSTTSFGLTPVLTIYLDILPSEGLSRAKRAKKLNRKIYSDKIERESLQFHESVREGYLSQ 179

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P+R  +V +  + +     I  I+  ++
Sbjct: 180 AEKYPERIKVVKTQETVEKTEVCIREIIDLVL 211


>gi|227496773|ref|ZP_03927046.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434]
 gi|226833726|gb|EEH66109.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434]
          Length = 265

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 82/219 (37%), Positives = 111/219 (50%), Gaps = 8/219 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+SFEG +G GKTT I  L   L+    D  VTREPGGT      R +LL  G  E  
Sbjct: 19  GLFLSFEGGDGVGKTTQIHRLSGLLEAAGVDCLVTREPGGTELGAEIRRLLLHGG--EVS 76

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AEA+++AA R  HV+  +RPAL  G +++ DR+LDSS AYQG   S     +  L   
Sbjct: 77  ARAEALLYAADRAHHVQTRVRPALARGGVVITDRYLDSSVAYQGAARSLGSQEVRDLSLW 136

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q ++PD TI+LD    I            E A LD  ER+    H   R+ FL +A  
Sbjct: 137 ATQGLLPDLTILLDAEPGI------AARRAGERAALDRLEREPSSFHVALREEFLALAAA 190

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           +P R  ++D+    + VA  +   V  L++ R       
Sbjct: 191 EPGRFVVIDADRGVEEVAEQVTAAVVRLIRSRTESPGGH 229


>gi|330686068|gb|EGG97690.1| dTMP kinase [Staphylococcus epidermidis VCU121]
          Length = 203

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT +  +   L  ++YDV  TREPGG P  E  R V+L    ++    
Sbjct: 4   FITFEGPEGSGKTTVLKAVAEKL-AQHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   +I+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L      +  +++D+  HEK  + +  +  N+P
Sbjct: 121 NGLYPDLTIYLDVSAEVGRERI-----LSNQRDQNRLDQEDIDFHEKVIEGYHQVIHNEP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R   +D+  S + V       + + ++
Sbjct: 176 ERFVQIDADQSIEEVVLATYQSIIKYLK 203


>gi|293391495|ref|ZP_06635829.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952029|gb|EFE02148.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 210

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 8/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T    +   L+     +V  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRHLIKHENEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L SL++
Sbjct: 63  TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+   +GL R + R        LD  E+++     + R  +L++ +
Sbjct: 123 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + P +  I+D+A   + V  +I + V   
Sbjct: 177 DNP-KAVIIDAAQPVEQVRADIQSAVKNW 204


>gi|254483666|ref|ZP_05096886.1| thymidylate kinase [marine gamma proteobacterium HTCC2148]
 gi|214036077|gb|EEB76764.1| thymidylate kinase [marine gamma proteobacterium HTCC2148]
          Length = 215

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+ EG EG GK+T+++ +++ L     D+ VTREPGGT   E  R +LL    + 
Sbjct: 3   SRGLFITVEGGEGVGKSTNMAYMQQHLTDLGIDLLVTREPGGTALGEDIRELLLRPRQES 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             + AE ++  AAR  H+E V+ PAL  G+ +LCDRF D++YAYQG         +  L+
Sbjct: 63  MASGAELLLIFAARAQHLEQVVEPALANGRWVLCDRFTDATYAYQGGGRGLAVTMIRELE 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++   E+ PD T++LD PV +G+ R + R        LD FE +     E+ R  +L +A
Sbjct: 123 QLVQGELRPDYTLLLDAPVAVGMSRARER------GELDRFELEQTAFFERVRASYLQLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                R  +VD++     V   +  I  EL
Sbjct: 177 SESSGRYRVVDASKELVEVEQQLQEICSEL 206


>gi|325570727|ref|ZP_08146453.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755]
 gi|325156573|gb|EGC68753.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755]
          Length = 220

 Score =  244 bits (624), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +GLFI+ EG +GAGKT+ I  L   LQ      +  TREPGG   AE  R ++L    +E
Sbjct: 7   NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+  V+ PAL  G I++CDRF+DSS AYQG         +  + 
Sbjct: 67  MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + +   PD T+ LD+  D GL+R+Q       +   D  + + +  H++ R  +L +A
Sbjct: 127 EFATEGTTPDFTLYLDVDSDTGLRRIQEN----RAHQYDRLDSEGLEFHQRVRHAYLKLA 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R H +D+    Q V  +  + + E
Sbjct: 183 EENPVRIHKIDARMGLQEVVESSYSAIVE 211


>gi|90417679|ref|ZP_01225591.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337351|gb|EAS51002.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1]
          Length = 222

 Score =  244 bits (624), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 89/205 (43%), Positives = 134/205 (65%), Gaps = 3/205 (1%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           +FEG EG+GKTT I+ L   L+ + +DV  TREPGG+P A+A RHV+LS   +  G E E
Sbjct: 2   TFEGGEGSGKTTQIARLAGHLRSEGHDVVTTREPGGSPGADALRHVILSGAAEGLGVEVE 61

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           A++FAAAR DHV+ +IRPAL  GKI+LCDRF DS+  YQ         + D+++  ++ +
Sbjct: 62  AMLFAAARADHVDTLIRPALDAGKIVLCDRFHDSTRVYQFLDSELDQDYRDAMERAALGD 121

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
           ++P+ TIILD+P  +G++R + R   R     D FE++D  +HE+RRQ F  +A ++P+R
Sbjct: 122 LLPNLTIILDVPASVGVERARQR---RADHSPDRFEKEDEALHERRRQAFRKLAEDEPER 178

Query: 188 CHIVDSAHSFQSVATNILNIVWELV 212
           C IVD   +   VA  I +++ + +
Sbjct: 179 CVIVDGTQAEDKVAAEIRDLIDDRL 203


>gi|242371688|ref|ZP_04817262.1| dTMP kinase [Staphylococcus epidermidis M23864:W1]
 gi|242350637|gb|EES42238.1| dTMP kinase [Staphylococcus epidermidis M23864:W1]
          Length = 208

 Score =  244 bits (624), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 9/214 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN    FI+FEG EGAGKT+ I+ + + L  +++DV  TREPGG P  E  R V+L    
Sbjct: 1   MNKMSAFITFEGPEGAGKTSVITKVSQKL-AEDFDVITTREPGGVPTGEEIRRVVLDG-- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D      EA++FAA+R +H+   + PAL +GKI+LCDR++DSS AYQG         + +
Sbjct: 58  DNMDIRTEAMLFAASRREHLVEKVIPALKDGKIVLCDRYIDSSLAYQGYARGIGIEEVQT 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E ++  + PD TI LD+  ++G +R+     L+ +   +  +++D   HEK  + +  
Sbjct: 118 LNEFAINGLYPDLTIYLDVSAEVGRQRI-----LKNNRDQNRLDQEDKAFHEKVIEGYHK 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +    P+R   V++  + ++V       + + ++
Sbjct: 173 VIEGNPERFVKVNANQNLENVVEEAYQSIIKYLK 206


>gi|227545157|ref|ZP_03975206.1| dTMP kinase [Lactobacillus reuteri CF48-3A]
 gi|300909170|ref|ZP_07126631.1| thymidylate kinase [Lactobacillus reuteri SD2112]
 gi|227184889|gb|EEI64960.1| dTMP kinase [Lactobacillus reuteri CF48-3A]
 gi|300893035|gb|EFK86394.1| thymidylate kinase [Lactobacillus reuteri SD2112]
          Length = 213

 Score =  244 bits (624), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ I  +++ L+ +     V  TREPGG   +E  R VL      +
Sbjct: 3   GKFISFEGPDGAGKTSVIQQIQQQLEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDRF+DSS AYQG         +  + 
Sbjct: 63  MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  +MP  TI LD+  +IGL+R+        S  ++  +++ +  H+  RQ +L + 
Sbjct: 123 QFAIDGLMPSLTIYLDIESEIGLRRIAE----HRSNQINRLDKEKLAFHQTVRQSYLKLY 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +N P+R  ++D++   + V  ++   + +
Sbjct: 179 KNYPERIKLIDASQPLEKVIEDVKATIHD 207


>gi|229818395|ref|ZP_04448676.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM
           20098]
 gi|229784265|gb|EEP20379.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM
           20098]
          Length = 215

 Score =  244 bits (624), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 17/221 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M+ G+FISFEG++G GKTT ++ L+  L+    +V VTREPGGT    A R +LL     
Sbjct: 3   MHQGIFISFEGVDGVGKTTQVNRLRDELEAMGREVVVTREPGGTALGTAIRRLLLHGVPV 62

Query: 58  ------GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
                    +     EA++FAA R  HV  VIRPAL  G +++ DR+ DSS AYQ     
Sbjct: 63  ESADGEACADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYCDSSLAYQAGGRE 122

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                + SL   +   ++P  T +LD+   +   R+ +          D  E        
Sbjct: 123 LTAAEIRSLSMWATDGLLPVRTYLLDMDPALSHTRLDH--------DEDRMEAAGSAFQR 174

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + RQ FLD+A  +P+R  ++D++ + + V   I      L+
Sbjct: 175 RTRQAFLDLAAREPNRFRVIDASGTVEEVWQAIREDFVGLL 215


>gi|229544854|ref|ZP_04433579.1| thymidylate kinase [Enterococcus faecalis TX1322]
 gi|229310022|gb|EEN76009.1| thymidylate kinase [Enterococcus faecalis TX1322]
          Length = 212

 Score =  244 bits (624), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 5/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+FI+FEG +GAGKT+ +  +   L +     +  TREPGG P AE  R V+L    D 
Sbjct: 2   QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL  G ++LCDRF+DSS AYQG         + S+ 
Sbjct: 62  MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + V PD TI LD+  D GL+R+Q   +      +D  + + +  H++ R  +L +A
Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P R   +D+  S + V       + E
Sbjct: 178 EENPQRIKKIDARMSLELVVEVTYQAIIE 206


>gi|30995377|ref|NP_438617.2| thymidylate kinase [Haemophilus influenzae Rd KW20]
 gi|260580481|ref|ZP_05848309.1| thymidylate kinase [Haemophilus influenzae RdAW]
 gi|260092823|gb|EEW76758.1| thymidylate kinase [Haemophilus influenzae RdAW]
          Length = 219

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 131 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213


>gi|124267049|ref|YP_001021053.1| thymidylate kinase / thymidylate synthase [Methylibium
           petroleiphilum PM1]
 gi|124259824|gb|ABM94818.1| thymidylate kinase / thymidylate synthase [Methylibium
           petroleiphilum PM1]
          Length = 215

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 13/212 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FISFEGI+GAGK++H+  +    QR+  +V  TREPGGTP AE  R ++L  G    
Sbjct: 10  SGRFISFEGIDGAGKSSHLDAVAERWQRRGLEVVRTREPGGTPLAETLRDLVLHQG---M 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++  AAR +H++  I PAL  G ++LCDRF D+++AYQG         L +L+ 
Sbjct: 67  DALTEALLIFAARRNHLQQCIAPALERGAVVLCDRFTDATFAYQGAGRGFDLAVLTTLES 126

Query: 123 ISVQEV----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              +       PD T+  DL   +  +R+        +   D FER+D     + R  + 
Sbjct: 127 WVQRGPGGLRQPDLTLWFDLDPAVAAQRLVA------ARTPDRFERQDEAFFHRVRDGYR 180

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                QP+R   +D++ S   VA  I  ++ E
Sbjct: 181 ARFEAQPERFVRIDASQSRDQVAVQIAAMLAE 212


>gi|306834090|ref|ZP_07467210.1| thymidylate kinase [Streptococcus bovis ATCC 700338]
 gi|304423663|gb|EFM26809.1| thymidylate kinase [Streptococcus bovis ATCC 700338]
          Length = 211

 Score =  244 bits (623), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIITTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDNKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIIRRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +     PD T+  D+  +IGL R+           ++  + + + +H++ R+ +L +
Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVREGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              +  R   +D++     V +  L+ + E + K
Sbjct: 177 TEQEK-RIVTIDASRELAEVVSETLHTILEQLAK 209


>gi|259502695|ref|ZP_05745597.1| dTMP kinase [Lactobacillus antri DSM 16041]
 gi|259169340|gb|EEW53835.1| dTMP kinase [Lactobacillus antri DSM 16041]
          Length = 218

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 6/216 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLSCGVD 60
            G FISFEG +GAGKT+ +  +++ L  +   D V  TREPGG   +E  R VL S    
Sbjct: 6   RGKFISFEGPDGAGKTSVLRAIQKRLVDQLGADRVMYTREPGGNHISEQIRRVLFSPENT 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++FAAAR  H+ + I P L  GK++LCDR++DSS AYQG         +  +
Sbjct: 66  DMDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRQLGEEAIWQM 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++  ++PD TI LD+   +GL+R+        +  ++  + + +  H+  R  +L +
Sbjct: 126 NQFAIDGLLPDLTIYLDVESAVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRL 181

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            R  PDR  ++D++     V  ++   + +    R 
Sbjct: 182 YRAHPDRIKLIDASQPLDQVIADVAQTIEQRFPDRF 217


>gi|57234426|ref|YP_181510.1| thymidylate kinase [Dehalococcoides ethenogenes 195]
 gi|123618736|sp|Q3Z8D9|KTHY_DEHE1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|57224874|gb|AAW39931.1| thymidylate kinase [Dehalococcoides ethenogenes 195]
          Length = 207

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+FEG EG GK+T    L R+L++      +T EPGGT + +    +L     +    
Sbjct: 3   LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGTRSGDKITRLLKWSEEENISP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A+R   ++NVI+PAL++G I++CDR+ DS+ AYQG     +   +  +  ++
Sbjct: 63  LAELFLFNASRSILIDNVIKPALLDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD TI LD+     L R       +     D FE ++   H++ R  F  IA  +
Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           P+R   +D++ S   +   I   V  L++
Sbjct: 176 PNRFLKLDASLSQSELTKCIKQRVNALLK 204


>gi|88859588|ref|ZP_01134228.1| thymidylate kinase [Pseudoalteromonas tunicata D2]
 gi|88818605|gb|EAR28420.1| thymidylate kinase [Pseudoalteromonas tunicata D2]
          Length = 209

 Score =  244 bits (623), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 7/211 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI  EG+EGAGK+T I+L +  L+    +   TREPGGTP AE+ R+++ +   +   A
Sbjct: 4   KFIVIEGLEGAGKSTAIALCQEILKAHQVNFVNTREPGGTPLAESLRNLVKATHQEIMSA 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE ++  AAR   + NVIRPAL  G+ +L DR   SS AYQG         L++L  I 
Sbjct: 64  EAELLIMYAARAQLLTNVIRPALANGQWVLGDRHNLSSLAYQGGGRELDSSTLNALSNIV 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++ + PD TI LD+   +GL R   R        LD  E++ +   E+ R  +L IA + 
Sbjct: 124 LKGLKPDLTIYLDIDPAVGLARAAGR------GALDRIEQEQLSFFERTRAQYLAIAASD 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P    +V +     +V  +I  ++   + ++
Sbjct: 178 PS-IKVVQAGQEISAVHQDIRAVLTAFLVEQ 207


>gi|297582371|ref|YP_003698151.1| thymidylate kinase [Bacillus selenitireducens MLS10]
 gi|297140828|gb|ADH97585.1| thymidylate kinase [Bacillus selenitireducens MLS10]
          Length = 210

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 4/202 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EG EGAGKT+ +  L + L  + +DV +TREPGG+  AE  R V+L     E   
Sbjct: 6   RFITVEGGEGAGKTSVLKDLHQALILEGHDVLMTREPGGSVIAEKIRDVILDPAHKEMDD 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AAAR  H+   + P L +G ++LCDR++DSS  YQG         +  L   +
Sbjct: 66  RTEALLYAAARRQHLTEKVLPHLEKGGVVLCDRYVDSSLVYQGGARGIGIEEVRELNHFA 125

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +   P  T   D+  ++GL R+       +    +  + + +  HE+ R  +L +A+ +
Sbjct: 126 TEAFYPGKTFYFDVSPEVGLGRIAAN----KGREFNRLDGESLAFHEQVRATYLTLAKEE 181

Query: 185 PDRCHIVDSAHSFQSVATNILN 206
           P R  ++D+  +   V  ++L 
Sbjct: 182 PARITVIDAERTQDEVLRDVLQ 203


>gi|119897886|ref|YP_933099.1| thymidylate kinase [Azoarcus sp. BH72]
 gi|119670299|emb|CAL94212.1| dTMP kinase [Azoarcus sp. BH72]
          Length = 206

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 8/210 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGI+GAGK++ I+ +   L+ +   V  +REPGGTP  E  R        +
Sbjct: 1   MQHGRFITFEGIDGAGKSSQIAAVVDILRARGCTVEQSREPGGTPLGERLRE---LLLHE 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E EA++  AAR +H+   I PAL  G  ++CDRF D++YAYQ           D+L
Sbjct: 58  PMNLETEALLMFAARREHLAARIVPALQAGNWVVCDRFSDATYAYQVGGRGLAREKFDAL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +      + PD T++ DLP +I   RV     +   A  D FER+     E+ R  +L+ 
Sbjct: 118 EAWVHPGLQPDLTLVFDLPPEIAAARV-----VSSGAQPDRFEREQRDFFERVRNAYLER 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+  P R  ++D+    + +   I  +V E
Sbjct: 173 AQAAPQRIRVIDANRPPEVIRAEIEQLVVE 202


>gi|193212981|ref|YP_001998934.1| dTMP kinase [Chlorobaculum parvum NCIB 8327]
 gi|238692645|sp|B3QP81|KTHY_CHLP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|193086458|gb|ACF11734.1| dTMP kinase [Chlorobaculum parvum NCIB 8327]
          Length = 217

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T +  LKR LQ +  +V   REPGGTP AE  R +LL    D   +
Sbjct: 1   MLITFEGIDGAGKSTQVVKLKRHLQERGREVLTLREPGGTPVAEQIRELLLESHND-ITS 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F+A+R + +E +I PAL +G  ++ DRF DS+ AYQG         L  +  I+
Sbjct: 60  IAELLLFSASRAELMEKIIVPALEDGCDVILDRFFDSTTAYQGYGRGLNLDMLAEINRIA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LDL  +  L R  +  SL    ES  LD  E   +  +++ R  +  I 
Sbjct: 120 SHGIRPDITFYLDLTPEDALLRKFSEKSLPLAFESEELDRMENSGLEFYQRVRAGYHAIL 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +P R  ++D+  + Q +   IL+ +  L
Sbjct: 180 EAEPQRIIMIDALLTPQEIHRKILSALQAL 209


>gi|262278188|ref|ZP_06055973.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202]
 gi|262258539|gb|EEY77272.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202]
          Length = 199

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 8/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
           +P+R   +D+  S   V    L  + 
Sbjct: 174 EPERIKRLDATRSPDQVFEQALQYLR 199


>gi|296135948|ref|YP_003643190.1| thymidylate kinase [Thiomonas intermedia K12]
 gi|295796070|gb|ADG30860.1| thymidylate kinase [Thiomonas intermedia K12]
          Length = 215

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF+S EGI+GAGK+T +  +   L+  N  V +TREPGGT   E  R +LL      
Sbjct: 8   RPGLFVSLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLHQ---T 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++  AAR +HV  VI PAL+ G  ++CDRF  ++ AYQG         L++L 
Sbjct: 65  MRPATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALA 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PDC I++D+P ++  +R+        +   D FE++ V    + R  +L  A
Sbjct: 125 RWVHPGLCPDCIILIDVPPEVAAQRLAQ------TRQRDRFEQESVDFFARVRANYLQQA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            + P++  ++D   + ++V   I + + +++Q+
Sbjct: 179 ASAPEKWRVIDGTQTPEAVQKTITDYLKKVLQE 211


>gi|262373085|ref|ZP_06066364.1| thymidylate kinase [Acinetobacter junii SH205]
 gi|262313110|gb|EEY94195.1| thymidylate kinase [Acinetobacter junii SH205]
          Length = 199

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 8/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ +++  +V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRTLLLAVNHDELMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GKI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQCAGRGLSQEKLQLLNQT 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MP+ T  LD P+++G+ R + R        LD FE++ +    K R  +  + + 
Sbjct: 121 FV-AKMPNITFWLDAPIELGMTRARER------GALDRFEQEKLSFFAKVRAGYKTLWQA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
           +P+R   +D+  +   V    L  + 
Sbjct: 174 EPERIKRLDATQNADVVFEEALQYLK 199


>gi|261377929|ref|ZP_05982502.1| dTMP kinase [Neisseria cinerea ATCC 14685]
 gi|269145789|gb|EEZ72207.1| dTMP kinase [Neisseria cinerea ATCC 14685]
          Length = 206

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 65/203 (32%), Positives = 115/203 (56%), Gaps = 7/203 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGK+T+++ +K + +R+   V  TREPGGT   EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKSTNLAAIKAWFERRRLPVLFTREPGGTALGEALREILLNPATKA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  A+R+ H+E VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  AETLMMFASRMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T++LD+P+++ + R+        +   D FE++      + R ++L+ A   P
Sbjct: 124 GSLKPDLTLLLDVPLEVSMARIGQ------AREKDRFEQEQADFFMRVRGVYLNRATACP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +R  ++D   S + V  +I  ++
Sbjct: 178 ERYAVIDGNRSVEEVRNSIEKVL 200


>gi|152973878|ref|YP_001373395.1| thymidylate kinase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|189028827|sp|A7GJU2|KTHY_BACCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|152022630|gb|ABS20400.1| dTMP kinase [Bacillus cytotoxicus NVH 391-98]
          Length = 208

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GK+T I+ L  + + K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKSTLITKLLPYFENKGQKVIATREPGGIAISEEIRTILHKKEYTTM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL   +++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEADQLVLCDRFIDSSLAYQGYARGLGIDKVYEMNR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++       +  ++  + + +  H   R+ +L I  
Sbjct: 122 FATEDCMPSLTIYLDIAPEVGLARIEK----DAAREVNRLDMESIAFHRLVREGYLQIVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    ++V   ++ ++   +
Sbjct: 178 RFKDRIVVVNADQPMENVVEEVIQLIESKL 207


>gi|269217490|ref|ZP_06161344.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269213111|gb|EEZ79451.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 210

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG +G+GKTT + LL  +L+ + +DV  TR+PGGT      R +LL  G  +   
Sbjct: 1   MFITFEGGDGSGKTTQMQLLAEWLRGRGFDVVTTRDPGGTELGRHIRKLLLHGG--DVSP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AEA+++AA R  +V  V+RPAL  G I+L DR++DSS AYQG   +     +  L    
Sbjct: 59  RAEALLYAADRAHNVATVVRPALERGAIVLADRYIDSSAAYQGAGRTLGEDEVRGLSLWG 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + +MPD T+ LDLP +    R+            D  E      HE  R+ +L  A  +
Sbjct: 119 TEGLMPDLTVFLDLPAEALASRL--------GGSFDRIEAAGARFHEDVRRAYLRFAAAE 170

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           P+R   VD+    + +A  +   V E ++
Sbjct: 171 PERWFTVDATVPRERIAETVRARVAEALE 199


>gi|239637468|ref|ZP_04678442.1| thymidylate kinase [Staphylococcus warneri L37603]
 gi|239596913|gb|EEQ79436.1| thymidylate kinase [Staphylococcus warneri L37603]
          Length = 203

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT +  +   L  ++YDV  TREPGG P  E  R V+L    ++    
Sbjct: 4   FITFEGPEGSGKTTVLKAVAEKL-AQHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL   +I+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVMPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L      +  +++D+  HEK  + +  +  N+P
Sbjct: 121 NGLYPDLTIYLDVSAEVGRERI-----LSNQRDQNRLDQEDIDFHEKVIEGYHRVIHNEP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R   +D+  S   V       + + ++
Sbjct: 176 ERFVQIDADQSIDKVVLAAYQSIIKYLK 203


>gi|288905947|ref|YP_003431169.1| thymidylate kinase [Streptococcus gallolyticus UCN34]
 gi|288732673|emb|CBI14245.1| thymidylate kinase [Streptococcus gallolyticus UCN34]
          Length = 211

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 69/214 (32%), Positives = 110/214 (51%), Gaps = 5/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ ISFEG +GAGKTT +  +   LQ K YD+  TREPGG   AE  R V+L     
Sbjct: 1   MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++ E +++ AAR  H    + PAL  GK++L DRF+DSS AYQG         +  L
Sbjct: 61  AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +     PD T+  D+  +IGL R+           ++  + + + +H++ R+ +L +
Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVRKGYLAL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A  +  R   +D++     V    L+ + E + K
Sbjct: 177 AEQEK-RIVTIDASRELADVVLETLHTILEQLAK 209


>gi|126726755|ref|ZP_01742595.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150]
 gi|126704084|gb|EBA03177.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150]
          Length = 209

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 78/204 (38%), Positives = 110/204 (53%), Gaps = 6/204 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEGI+G+GK+T    L   L    +DV  TREPGG+  AE  R +L+    D + AE
Sbjct: 12  FITFEGIDGSGKSTQAKRLVAHLTSLGHDVIHTREPGGSAGAEEIRRLLVEGDPDRWSAE 71

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++F AAR DH+E  I PAL  GK ++ DRF DS+  YQG         +D+L    +
Sbjct: 72  TEILLFTAARRDHLEKTIIPALAAGKWVVSDRFADSTRVYQGATRGDLRGIVDALHAQMI 131

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             V PD T I+D+     L R   R S       D FE   +   E+ RQ FLD+A++ P
Sbjct: 132 -GVEPDMTFIIDMDPVAALSRGLARKS-----GEDRFEDFGLDFQERLRQGFLDLAKDYP 185

Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209
           DRC ++D +    +V+ +I  +  
Sbjct: 186 DRCRLIDGSRGIDAVSADITAVFE 209


>gi|229487554|sp|A3M7Q1|KTHY_ACIBT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|193078024|gb|ABO12945.2| thymidylate kinase [Acinetobacter baumannii ATCC 17978]
          Length = 199

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + +  + +   V +TREPGGTP AE  R +LL+   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +    MP+ T  LD P+++G+ R + R        LD FE++ +    K R+ +  + + 
Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKV 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R   +D+  S   V    L  +
Sbjct: 174 EPERIKRLDATQSPDQVFEQALQYL 198


>gi|257094047|ref|YP_003167688.1| thymidylate kinase [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
 gi|257046571|gb|ACV35759.1| dTMP kinase [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 211

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 8/207 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEGI+GAGK++HI+ +  FL+R+   V  TREPGGTP  EA R +LL    + 
Sbjct: 8   RRGKFITFEGIDGAGKSSHIAGVAAFLRRRGLQVLTTREPGGTPLGEALRELLLH---EA 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  AAR +H+  VI PAL  G  ++CDRF D++YAYQ      +      L+
Sbjct: 65  MHLETEALLMFAARREHLARVIEPALERGDWVVCDRFSDATYAYQSGGRGLERKKFAQLE 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E     + PD T++ DL   I   R+     + ++  LD FE++    HE+ R+ +L+ A
Sbjct: 125 EWVHSHLQPDLTLLFDLSSSIASGRI-----VAQARELDRFEQERSDFHERVRRAYLERA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P R  I+D+  + +++   I +I+
Sbjct: 180 IAAPQRIQIIDAEQAPEAIKKMIEDII 206


>gi|254486634|ref|ZP_05099839.1| thymidylate kinase [Roseobacter sp. GAI101]
 gi|214043503|gb|EEB84141.1| thymidylate kinase [Roseobacter sp. GAI101]
          Length = 210

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 7/216 (3%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M S G FISFEGI+G+GK+T   +LK  L+   YDV +TREPGG+P AE  R ++L    
Sbjct: 1   MKSQGFFISFEGIDGSGKSTQTKILKESLEALGYDVILTREPGGSPGAEEIRALVLQGDP 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D + A+ E ++F AAR DH+E  I+PAL  GK+++CDRF DS+  YQG         +D 
Sbjct: 61  DRWSAQTEILLFTAARRDHLERTIQPALDAGKVVICDRFADSTRMYQGLSRGDLRDAVDQ 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L  + +  + PD T+++D+    GL R  +R ++ E      FE     +    R+ FL 
Sbjct: 121 LHALMI-GIEPDLTVLIDMDPAEGLSRALSRNTVEE-----RFEDFGESLQVAMRKGFLA 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +A    DR  ++D A     VA ++L      +  R
Sbjct: 175 LAEEFDDRFVVIDGARQIDQVAADVLAQTRARLDAR 210


>gi|330428264|gb|AEC19598.1| Thymidylate kinase [Pusillimonas sp. T7-7]
          Length = 216

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 5/215 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GL I  +G  GAGK T +  ++ FL     +V +TREPGGT   E  R +LL     
Sbjct: 1   MNKGLMIVVDGGNGAGKGTCLHDIEAFLSGLGLEVVMTREPGGTAIGEQIREILLDKSAV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++FAAAR  HV   I PA+  GK+++ DRF  ++ ++Q          ++SL
Sbjct: 61  EMCDVTELMLFAAARAQHVRQKIVPAINAGKVVVSDRFDSATISFQHYARGLDLELINSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+V  + PD TIILDL   +GL+RV +R S       D  E++++   E+ RQ ++  
Sbjct: 121 NDIAVAGLRPDFTIILDLDPAVGLQRVASRGSD-----FDRLEKENLSFLERARQGYIKQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A   P R   VD++ SF  V   +L +V +++ + 
Sbjct: 176 ALADPQRFATVDASQSFDQVRHEVLQLVEQVIARH 210


>gi|300769770|ref|ZP_07079652.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|300492678|gb|EFK27864.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 225

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 5/225 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  ++FEG +GAGKT+ ++ +   LQ +    + VTREPGG   +EA R ++L    
Sbjct: 5   MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  EA+++AAAR  H+   I+PAL   +++LCDR++DSS AYQG         +  
Sbjct: 65  TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 124

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +   +  D T+  D+   +GL R+Q          ++  + + +  H + +  +L 
Sbjct: 125 MNQFATAGLTADLTLYFDVDAAVGLNRIQQ----HRQNEINRLDVEALSFHHRVQAAYLR 180

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           +  + PDR   VD++     V T  L I+   +   V+    +  
Sbjct: 181 LLADHPDRIKRVDASQPLDQVVTQALEIMASQLPAYVASKGGEDQ 225


>gi|148543567|ref|YP_001270937.1| thymidylate kinase [Lactobacillus reuteri DSM 20016]
 gi|184152974|ref|YP_001841315.1| thymidylate kinase [Lactobacillus reuteri JCM 1112]
 gi|227363473|ref|ZP_03847595.1| thymidylate kinase [Lactobacillus reuteri MM2-3]
 gi|325681917|ref|ZP_08161435.1| thymidylate kinase [Lactobacillus reuteri MM4-1A]
 gi|166987704|sp|A5VIC6|KTHY_LACRD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621731|sp|B2G5V3|KTHY_LACRJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148530601|gb|ABQ82600.1| thymidylate kinase [Lactobacillus reuteri DSM 20016]
 gi|183224318|dbj|BAG24835.1| thymidylate kinase [Lactobacillus reuteri JCM 1112]
 gi|227071487|gb|EEI09788.1| thymidylate kinase [Lactobacillus reuteri MM2-3]
 gi|324978561|gb|EGC15510.1| thymidylate kinase [Lactobacillus reuteri MM4-1A]
          Length = 213

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 6/209 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEG +GAGKT+ I  ++  L+ +     V  TREPGG   +E  R VL      +
Sbjct: 3   GKFISFEGPDGAGKTSVIQQIQLELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H+ + I P L  GK++LCDRF+DSS AYQG         +  + 
Sbjct: 63  MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++  +MP  TI LD+  +IGLKR+        S  ++  + + +  H   RQ +L + 
Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRIAE----HRSNQVNRLDEEKLEFHRTVRQSYLKLY 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +N P+R  ++D++   + V  ++   + +
Sbjct: 179 QNYPERIELIDASQPLEKVIEDVKATIHD 207


>gi|297538533|ref|YP_003674302.1| thymidylate kinase [Methylotenera sp. 301]
 gi|297257880|gb|ADI29725.1| thymidylate kinase [Methylotenera sp. 301]
          Length = 212

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 5/217 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I  +G  GAGK+T +  ++  L+ K YD  +TREPGGT   E  R VLL     
Sbjct: 1   MNKGCMIVCDGGNGAGKSTVLRAIEEHLKTKQYDYVMTREPGGTVIGEKIREVLLCSDTP 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     E ++FAAAR  HV   I P++  GK+++ DRF  ++Y++Q          +  L
Sbjct: 61  EMCDVTELMLFAAARAQHVREKIIPSINAGKVVVSDRFDSATYSFQHYGRGLSLALIQQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I++     D TI+LD+    GL+RV +R S      LD  E  ++    K R  +L+ 
Sbjct: 121 NNIALDGFKADVTIVLDIDPVKGLERVISRGSD-----LDRMEMANIEFLHKARNGYLEQ 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A+  P+R  ++D++ S   V ++ + +V  ++ +++ 
Sbjct: 176 AKADPERFAVIDASQSLDVVISDAVKVVERVIARKLG 212


>gi|206972586|ref|ZP_03233529.1| thymidylate kinase [Bacillus cereus AH1134]
 gi|228950579|ref|ZP_04112714.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229067795|ref|ZP_04201113.1| Thymidylate kinase [Bacillus cereus F65185]
 gi|229077306|ref|ZP_04209987.1| Thymidylate kinase [Bacillus cereus Rock4-2]
 gi|229176631|ref|ZP_04304036.1| Thymidylate kinase [Bacillus cereus 172560W]
 gi|229188316|ref|ZP_04315365.1| Thymidylate kinase [Bacillus cereus ATCC 10876]
 gi|206732488|gb|EDZ49667.1| thymidylate kinase [Bacillus cereus AH1134]
 gi|228595115|gb|EEK52885.1| Thymidylate kinase [Bacillus cereus ATCC 10876]
 gi|228606798|gb|EEK64214.1| Thymidylate kinase [Bacillus cereus 172560W]
 gi|228705997|gb|EEL58304.1| Thymidylate kinase [Bacillus cereus Rock4-2]
 gi|228715279|gb|EEL67137.1| Thymidylate kinase [Bacillus cereus F65185]
 gi|228809054|gb|EEM55538.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 208

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEKKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|297242601|ref|ZP_06926540.1| thymidylate kinase [Gardnerella vaginalis AMD]
 gi|296889410|gb|EFH28143.1| thymidylate kinase [Gardnerella vaginalis AMD]
          Length = 239

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 10/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFISFEGI+G GKTT +  LK +LQ    +V VTREPGGT   +  R +LL      
Sbjct: 33  NKGLFISFEGIDGVGKTTQVEALKDYLQSSGREVVVTREPGGTQLGKTLREILLHG--TS 90

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAA R  HV  VIRPAL  G +++ DR++DSS AYQ          + +L 
Sbjct: 91  VSARTEALLFAADRAQHVAQVIRPALNRGAVVITDRYIDSSLAYQAGGRELTMDDVRTLS 150

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   + P+ T +LD+  +   KR+            D  E   +    + R+ FLD+A
Sbjct: 151 EWATDSLWPNRTYLLDMQPEDAFKRLH--------REQDRMESAGIDFARRTREAFLDLA 202

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   DR  ++D+  S +S++  I+  V  L+++
Sbjct: 203 QESADRYRVLDATFSAKSLSELIVQDVHNLIEE 235


>gi|262379436|ref|ZP_06072592.1| thymidylate kinase [Acinetobacter radioresistens SH164]
 gi|262298893|gb|EEY86806.1| thymidylate kinase [Acinetobacter radioresistens SH164]
          Length = 202

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/208 (37%), Positives = 113/208 (54%), Gaps = 8/208 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  +    ++K  ++ +TREPGGT  AE  R +LLS   DE   
Sbjct: 1   MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTSLAEQIRALLLSVSHDEKMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GK +LCDRF D+S+AYQ          L  L + 
Sbjct: 61  DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLALLNQS 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T+ LD PV++G+ R + R        LD FE++ V   EK R  +  + + 
Sbjct: 121 FV-SRMPDITLWLDAPVELGMSRARER------GALDRFEQEKVSFFEKVRAGYTRLWQQ 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
            P+R   +D+  + + V    L  + +L
Sbjct: 174 HPERIKRLDATQAPEKVLEQALEQIGKL 201


>gi|301051766|ref|YP_003789977.1| thymidylate kinase [Bacillus anthracis CI]
 gi|300373935|gb|ADK02839.1| thymidylate kinase [Bacillus cereus biovar anthracis str. CI]
          Length = 208

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP+ TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPNLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|295694727|ref|YP_003587965.1| thymidylate kinase [Bacillus tusciae DSM 2912]
 gi|295410329|gb|ADG04821.1| thymidylate kinase [Bacillus tusciae DSM 2912]
          Length = 209

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 4/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+FI+FEG +GAGK+T ++LL   LQ+       TREPGGT  ++  R +LL     E 
Sbjct: 2   TGVFITFEGPDGAGKSTQVALLASRLQKACIRCITTREPGGTTISDKIRGILLDPHHREM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA+R   V   IRP L  G +++CDR++D+S AYQG         L  L  
Sbjct: 62  TPRTEALLYAASRAQLVGEFIRPHLERGDVVICDRYVDASLAYQGA-LGLDRKELARLNH 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + P  T ++D+P D+GL RV+ R+S+     +D  E + +  HE  R+ FL  A+
Sbjct: 121 WATDGLEPLRTYLIDVPADVGLDRVRTRHSM--YGVMDRIEERSIEYHEAVRRWFLGQAQ 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P R  ++D     + V+  I   V  L+ 
Sbjct: 179 TSP-RYRVIDGTMPPEMVSEAIWRDVKSLLN 208


>gi|84499967|ref|ZP_00998233.1| thymidylate kinase [Oceanicola batsensis HTCC2597]
 gi|84391901|gb|EAQ04169.1| thymidylate kinase [Oceanicola batsensis HTCC2597]
          Length = 217

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 6/213 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF+SFEGI+G+GK+T   +L   L+ +  DV +TREPGG+P AE  R ++L    D 
Sbjct: 7   RRGLFLSFEGIDGSGKSTQARMLAEALRAEGRDVVLTREPGGSPGAEEIRALVLQGDPDR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + A  E ++F AAR DH+E  IRPAL  G +++CDRF DS+  YQG         +D L 
Sbjct: 67  WSAATEILLFTAARRDHLERTIRPALDRGAVVICDRFADSTRMYQGLSRGDLRRTVDDLH 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  + PD T+++D+  ++GL R + R  + E      FE     +  + R  FLD+A
Sbjct: 127 ALMI-GIEPDLTLLIDMDPEVGLSRAKGRQGIEE-----RFEDFGAGLQARMRTGFLDLA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           R  P R  ++D A    +VA ++L      + +
Sbjct: 181 REFPARFRVIDGARPEGTVAADVLTAARTALSE 213


>gi|161723306|ref|NP_246612.2| thymidylate kinase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|14285512|sp|Q9CKE9|KTHY_PASMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 209

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 8/216 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EGIEGAGKTT    + R L     +D+  TREPGGTP AE  R ++     
Sbjct: 1   MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L +
Sbjct: 61  EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHLLHT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L++  + E  PD T+ LD+   +GL R + R        LD  E++++    + RQ + +
Sbjct: 121 LKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + R+ P +   +D++ +   VA ++ + +   +  R
Sbjct: 175 LVRHNP-KAVTIDASQTMSKVAEDVESAIETWLTTR 209


>gi|290475848|ref|YP_003468740.1| thymidylate kinase [Xenorhabdus bovienii SS-2004]
 gi|289175173|emb|CBJ81976.1| thymidylate kinase [Xenorhabdus bovienii SS-2004]
          Length = 213

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT I  +   L++    D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTAIRTVVETLKQYGISDLIFTREPGGTPLAEKLRQLIKQGVE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GESLTNKAEVLMLYAARVQLVENVIKPALEKGTWVVGDRHDLSSQAYQGGGRGIDQKLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+E ++ +  PD TI LDLP ++GL+R + R        LD  E++ +    + R+ +L
Sbjct: 120 SLRESALGDFYPDLTIYLDLPPEVGLQRARER------GELDRIEKESLDFFHRTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++     D    +D+    + V   I   + + ++++
Sbjct: 174 ELVAQD-DTIKKIDATQPLEKVQGAIRQTLLQWLKQQ 209


>gi|251793227|ref|YP_003007955.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700]
 gi|247534622|gb|ACS97868.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700]
          Length = 210

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 8/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T    +   L+    D V  TREPGGTP AE  RH++     +  
Sbjct: 3   GKFIVIEGLEGAGKSTAHQCVVDALKELGIDDVVFTREPGGTPLAEKLRHLIKHETEEPV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L SL+E
Sbjct: 63  TDKAELLMLYAARIQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLDQRLLQSLKE 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+   +GL R + R        LD  E++++    + R  +L + +
Sbjct: 123 TILGDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNLDFFHRTRARYLALVK 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + P +  I+++    + V T+I + V   
Sbjct: 177 DNP-KAVIINAEQPVEQVKTDIQSAVKNW 204


>gi|75762825|ref|ZP_00742646.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|218895166|ref|YP_002443577.1| thymidylate kinase [Bacillus cereus G9842]
 gi|228898784|ref|ZP_04063067.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
 gi|228956472|ref|ZP_04118269.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228963128|ref|ZP_04124298.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|229039935|ref|ZP_04189700.1| Thymidylate kinase [Bacillus cereus AH676]
 gi|229148440|ref|ZP_04276697.1| Thymidylate kinase [Bacillus cereus m1550]
 gi|226732651|sp|B7ISU0|KTHY_BACC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|74489692|gb|EAO53087.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|218540819|gb|ACK93213.1| thymidylate kinase [Bacillus cereus G9842]
 gi|228634982|gb|EEK91554.1| Thymidylate kinase [Bacillus cereus m1550]
 gi|228727394|gb|EEL78586.1| Thymidylate kinase [Bacillus cereus AH676]
 gi|228796513|gb|EEM43951.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228803162|gb|EEM49983.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228860809|gb|EEN05186.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
          Length = 208

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|241889540|ref|ZP_04776839.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
 gi|241863847|gb|EER68230.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
          Length = 208

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 7/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG +G+GKT+ I+    +L+ K Y V  TREPGGT  +E  R +L     D  
Sbjct: 2   KGKFITVEGSDGSGKTSFINFATEYLKEKGYKVITTREPGGTEFSEKVRELLFDSSND-I 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E+++F A+R DH+   I P + +G I++CDRF+DSS AYQ          + ++  
Sbjct: 61  DAKTESLLFCASRRDHIVKKILPHVNDGYIVICDRFVDSSVAYQSYGRGLSKQDILNINS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+   + V++GL R +NR         +  +++ +  ++  ++ + D++R
Sbjct: 121 YATDNLEPDLTLYFCVDVEVGLARTKNRDDN------NRMDQESLDFYKNVKRGYDDLSR 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              +R  ++D++ ++++V    L I+   +   +
Sbjct: 175 ENTERIKVIDASDTYENVQKKALAILEGFLNNEL 208


>gi|313201192|ref|YP_004039850.1| thymidylate kinase [Methylovorus sp. MP688]
 gi|312440508|gb|ADQ84614.1| thymidylate kinase [Methylovorus sp. MP688]
          Length = 201

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 9/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG++GAGK+THI  +   LQ +  +V  TREPGGT   E  R VLL       
Sbjct: 2   RGKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLH---TPM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E+++  AAR +H+  +I PAL  G  +L DRF D+S+AYQ          +  L++
Sbjct: 59  AAETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLASERIAQLEQ 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              Q + PD T++ D+PV++ ++R+        +   D FER+      + R+ +LD A+
Sbjct: 119 WVQQGLQPDLTLLFDVPVEVSVQRLAA------ARTPDKFERESADFFRRIRRAYLDRAQ 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P+R  I+DS    + V   +   +  L
Sbjct: 173 QFPERFRIIDSNQPLEQVKLAVRAALSAL 201


>gi|294651029|ref|ZP_06728369.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823130|gb|EFF81993.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194]
          Length = 199

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 8/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  + ++ +++  +V +TREPGGTP AE  R +LL+   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VI PAL  GKI+L DRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQCSGRGLSQEKLQLLNQT 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MP+ T  LD P+++G+ R + R        LD FE++ +    K R  +  + + 
Sbjct: 121 FV-AKMPNITFWLDAPIELGMTRARER------GALDRFEQEKLSFFAKVRAGYETLWQA 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
           +P+R   +D+  +   V    L  + 
Sbjct: 174 EPERIKRLDATQNADVVFGEALQYLK 199


>gi|228937333|ref|ZP_04099980.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970219|ref|ZP_04130879.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976789|ref|ZP_04137202.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
 gi|228782885|gb|EEM31050.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
 gi|228789454|gb|EEM37373.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228822291|gb|EEM68272.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937822|gb|AEA13718.1| thymidylate kinase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 208

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +R  +V++    + +   ++ I+ + +
Sbjct: 178 RFSERIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|116669282|ref|YP_830215.1| thymidylate kinase [Arthrobacter sp. FB24]
 gi|116609391|gb|ABK02115.1| thymidylate kinase [Arthrobacter sp. FB24]
          Length = 226

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 111/214 (51%), Gaps = 5/214 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFI+FEG +GAGK+T  + L   L  +   V  TREPGGTP  E  R ++L  G   
Sbjct: 5   NPGLFIAFEGGDGAGKSTQAAALAGALDSRGIRVLRTREPGGTPIGEKLRSLVLDHGHGH 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAA+R  H + VI PAL  G+I+L DR++DSS AYQG         +  L 
Sbjct: 65  IDARTEALIFAASRAAHADQVILPALERGEIVLTDRYIDSSVAYQGAGRDLGTAAVRDLN 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   + PD T++LD+   +G  R          A  D  E +    H K R  FLD+A
Sbjct: 125 EWATSGLQPDLTVLLDVDPAVGRLR-----RTAGDAAEDRMESEADEFHAKIRTAFLDLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            ++P+   ++ +      +A  IL  V  L+  R
Sbjct: 180 ADRPEHYLVLPAHLPVAELAGLILARVDSLIGSR 213


>gi|78187170|ref|YP_375213.1| thymidylate kinase [Chlorobium luteolum DSM 273]
 gi|123582911|sp|Q3B3B1|KTHY_PELLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78167072|gb|ABB24170.1| thymidylate kinase [Chlorobium luteolum DSM 273]
          Length = 214

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 4/214 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L  +L+++  +V   REPGGT  AE  RH+LL    D    
Sbjct: 1   MLITFEGIDGAGKSTQIQKLAAYLKQEGREVLTLREPGGTEVAEKIRHILLESRHD-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V  V+RPAL EGK ++ DRF DS+ AYQG         L +L  IS
Sbjct: 60  VGELLLFSASRAELVSEVVRPALAEGKTVILDRFFDSTTAYQGYGRGLDLNMLRTLIAIS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  SL    E+  LD  ER  +  +   RQ +LDI 
Sbjct: 120 TGALTPDITFYLDILPEEALIRKFSEKSLPLAFENEELDRMERSGLEFYRNVRQGYLDII 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +P R   +++ H  Q +   I+  + E  +++
Sbjct: 180 EAEPGRFKSINARHGVQEIHAIIVKTLNERFKEQ 213


>gi|221639987|ref|YP_002526249.1| Thymidylate kinase [Rhodobacter sphaeroides KD131]
 gi|254808303|sp|B9KKV1|KTHY_RHOSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221160768|gb|ACM01748.1| Thymidylate kinase [Rhodobacter sphaeroides KD131]
          Length = 217

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 115/212 (54%), Gaps = 1/212 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F++ EGI+G+GK+  +  L   L  +  DV VTREPGGTP  EA R ++L+   + +
Sbjct: 4   QGFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR+ HV  VI PAL +G++++ DR+  S+ AYQG        F+ +L  
Sbjct: 64  DPMAELLLMTAARVQHVRRVIAPALAQGQVVISDRYAGSTLAYQGTGRGLSEAFIRTLHA 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  ++ PD T++LDL   IGL R + R +  E+     FE  D+  HE+ R  FL  A 
Sbjct: 124 EATGDLWPDLTLVLDLEAGIGLARSRRRLTG-ETLDEGRFESLDLAFHERIRAAFLAQAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D++ + + V       +   + +
Sbjct: 183 RDPGRHAVIDASGTPEEVQARACAALTPFLAQ 214


>gi|125623282|ref|YP_001031765.1| thymidylate kinase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166221749|sp|A2RIC4|KTHY_LACLM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12483716|gb|AAG53731.1|AF178425_1 TcsCorf1 [Lactococcus lactis subsp. cremoris MG1363]
 gi|124492090|emb|CAL97019.1| Tmk protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070033|gb|ADJ59433.1| thymidylate kinase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 211

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   +V  TREPGG   AE  R ++L     E 
Sbjct: 2   NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++FAAAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFAAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+  D+  D+ L+R+        +  ++  + +   +H K R+ +L+I  
Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P R   +D++ S + V  + L ++ +
Sbjct: 178 KEPGRFVKIDASQSLEKVVADTLEVLKK 205


>gi|253999090|ref|YP_003051153.1| thymidylate kinase [Methylovorus sp. SIP3-4]
 gi|253985769|gb|ACT50626.1| thymidylate kinase [Methylovorus sp. SIP3-4]
          Length = 201

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 9/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG++GAGK+THI  +   LQ +  +V  TREPGGT   E  R VLL       
Sbjct: 2   RGKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLH---TPM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E+++  AAR +H+  +I PAL  G  +L DRF D+S+AYQ          +  L++
Sbjct: 59  AAETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLAAERIAQLEQ 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              Q + PD T++ D+PV++ ++R+        +   D FER+      + R+ +LD A+
Sbjct: 119 WVQQGLQPDLTLLFDVPVEVSVQRLAA------ARTPDKFERESADFFRRIRRAYLDRAQ 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P+R  I+DS    + V   +   +  L
Sbjct: 173 QFPERFRIIDSNQPLEQVKLAVRAALSTL 201


>gi|188584675|ref|YP_001916220.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349362|gb|ACB83632.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 206

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 10/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEGI+G GK+T +  +   L++  ++V  TREPGGT   +A R +LL+     
Sbjct: 3   KRGKFITFEGIDGCGKSTQLKKVTSKLKKLGFNVVSTREPGGTSVGDAIREILLAPKHYN 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA+++AA+R+ H+E  I P L E  I+LCDRF+DSS AYQG +    H  +  + 
Sbjct: 63  MTIETEALLYAASRVQHIEEFIIPNLAEDNIVLCDRFVDSSVAYQGIK--LSHEEVIRVN 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +  +V PD T ++D+  +   KR+            D  E + V    + R+ +L +A
Sbjct: 121 QPAYDKVTPDITFLIDITPERAAKRL--------GIEKDRIENRGVNYQSQVRENYLFLA 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +PDR  I++   S + V   + N++ +++
Sbjct: 173 EEEPDRIVIINGDQSEEKVFEELWNVLEDIL 203


>gi|28377570|ref|NP_784462.1| thymidylate kinase [Lactobacillus plantarum WCFS1]
 gi|254555748|ref|YP_003062165.1| thymidylate kinase [Lactobacillus plantarum JDM1]
 gi|308179722|ref|YP_003923850.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|38258053|sp|Q88YP6|KTHY_LACPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28270402|emb|CAD63305.1| thymidylate kinase [Lactobacillus plantarum WCFS1]
 gi|254044675|gb|ACT61468.1| thymidylate kinase [Lactobacillus plantarum JDM1]
 gi|308045213|gb|ADN97756.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 221

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G  ++FEG +GAGKT+ ++ +   LQ +    + VTREPGG   +EA R ++L    
Sbjct: 1   MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  EA+++AAAR  H+   I+PAL   +++LCDR++DSS AYQG         +  
Sbjct: 61  TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +   +  D T+  D+   +GL R+Q          ++  + + +  H + +  +L 
Sbjct: 121 MNQFATAGLTADLTLYFDVDAAVGLNRIQQ----HRQNEINRLDVEALSFHHRVQAAYLR 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  + PDR   VD++     V T  L I+   +
Sbjct: 177 LLADHPDRIKRVDASQPLDQVVTQALEIMASQL 209


>gi|227513699|ref|ZP_03943748.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577]
 gi|227522511|ref|ZP_03952560.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290]
 gi|227083018|gb|EEI18330.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577]
 gi|227090333|gb|EEI25645.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290]
          Length = 216

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+FEG +GAGKT+ ++ +    Q++    + VTREPGG   +E  R V+L     E
Sbjct: 2   TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL   K++LCDR++DSS AYQG         +  + 
Sbjct: 62  MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + ++++P  TI  ++PV++GL R+      R+S+ +D  + +    H++  Q ++ + 
Sbjct: 122 EFATEKILPYKTIYFEIPVEVGLNRIAK---HRDSSKIDRLDVETTAFHKRVHQGYMKLI 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               DR  I+D+    + V  +  +++ ++
Sbjct: 179 DEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208


>gi|1730073|sp|P44719|KTHY_HAEIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1573430|gb|AAC22114.1| thymidylate kinase [Haemophilus influenzae Rd KW20]
          Length = 210

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 122 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAVKNW 204


>gi|323490969|ref|ZP_08096163.1| thymidylate kinase [Planococcus donghaensis MPA1U2]
 gi|323395325|gb|EGA88177.1| thymidylate kinase [Planococcus donghaensis MPA1U2]
          Length = 216

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 4/214 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG EG+GK+T + +L   L  K + V  TREPGG   AE  R V+L+       
Sbjct: 2   GYLINLEGGEGSGKSTVLKMLAEALTEKGFSVVCTREPGGIDIAEQIREVILNRENTAMD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++AAAR  H+   I PAL  G I+LCDR++DSS AYQG         + ++ + 
Sbjct: 62  ARTEALLYAAARRQHLVEKIIPALETGSIVLCDRYIDSSLAYQGYARGLGMEEIFAINKF 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ E MPD T+  D+   +GL R++          ++  + + +  H K R+ +L +   
Sbjct: 122 AIDEYMPDLTLYFDVNPKVGLARIEK----DAGREVNRLDVESMKFHYKVREGYLLLLSK 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            P+R  +V++ +    V T+ L      +++R S
Sbjct: 178 NPERIRLVNAENELPIVFTDALETAVRFIEERQS 211


>gi|145638629|ref|ZP_01794238.1| thymidylate kinase [Haemophilus influenzae PittII]
 gi|145272224|gb|EDK12132.1| thymidylate kinase [Haemophilus influenzae PittII]
 gi|309750128|gb|ADO80112.1| Thymidylate kinase [Haemophilus influenzae R2866]
          Length = 219

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + + L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKYETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTAKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213


>gi|258591911|emb|CBE68216.1| thymidylate kinase [NC10 bacterium 'Dutch sediment']
          Length = 243

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 110/211 (52%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F++FEG EG+GKTT + LL   ++    +V  T +PGGT   +  R +LL  G    
Sbjct: 19  RGIFVTFEGGEGSGKTTQLKLLANRIRASGKEVIETHDPGGTAIGKEIRTLLLDPGSAPI 78

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  E +++ A+R   V  +I P L +G ++LCDRF DS+ AYQG   S     +  L  
Sbjct: 79  ASTTELLLYEASRAQLVRELIAPTLRQGVVVLCDRFTDSTLAYQGFGRSLDLDLIQRLNR 138

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-------ESACLDYFERKDVMIHEKRRQ 175
            +   V+PD TI+ DL  +IGL R +   SL        E AC D  E + +  H + R+
Sbjct: 139 CATDGVVPDLTILFDLDPEIGLTRCRRDTSLDAVTGSGAEPACWDRIEAEPLEFHRRIRE 198

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
            +L +AR   DR  ++D+      + T + N
Sbjct: 199 GYLALARENRDRMIVIDAGVGVTEIETIVWN 229


>gi|289435959|ref|YP_003465831.1| hypothetical protein lse_2598 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289172203|emb|CBH28749.1| tmk [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 208

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  ++L + ++    D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  I
Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREINRLDKEDISYHEKVQAGYEKI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               P+R   VD+  + + +   IL  +   + 
Sbjct: 176 MAMFPERYMRVDATKTPEEITDVILADILNNLN 208


>gi|313631628|gb|EFR98875.1| thymidylate kinase [Listeria seeligeri FSL N1-067]
          Length = 208

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  ++L + ++    D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  I
Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDISYHEKVQAGYEKI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               PDR   VD+  + + +   IL  +   + 
Sbjct: 176 MAMFPDRYMRVDATKTPEEITDVILADILNNLN 208


>gi|322515570|ref|ZP_08068551.1| dTMP kinase [Actinobacillus ureae ATCC 25976]
 gi|322118373|gb|EFX90639.1| dTMP kinase [Actinobacillus ureae ATCC 25976]
          Length = 208

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  EG+EGAGKTT   ++   L++   +V   REPGGTP AE  RH++     +  
Sbjct: 2   RGKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQIREPGGTPLAEKLRHLIKHETEEAV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQG         L++L+E
Sbjct: 62  SDKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHLLETLKE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI LD+   IGL R   R        LD  E++ +    + RQ +L++ +
Sbjct: 122 TVLGKFEPDLTIYLDIDPAIGLARAIGR------GELDRIEQQSLDFFYRTRQRYLELTQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           N  ++  I+++  S + VA +I   V   + 
Sbjct: 176 NN-EKAVIINAEQSIEQVAADIQQAVENFLN 205


>gi|313636002|gb|EFS01921.1| thymidylate kinase [Listeria seeligeri FSL S4-171]
          Length = 208

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  ++L + ++    D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  I
Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDISYHEKVQAGYEKI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               P+R   VD+  + + +   IL  +   + 
Sbjct: 176 MAMFPERYMRVDATKTPEEITDVILADILNNLN 208


>gi|326772517|ref|ZP_08231801.1| dTMP kinase [Actinomyces viscosus C505]
 gi|326637149|gb|EGE38051.1| dTMP kinase [Actinomyces viscosus C505]
          Length = 269

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/217 (35%), Positives = 112/217 (51%), Gaps = 8/217 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEG +G GKTT I +L   L   + D  +TREPGGT      R +LL  G     
Sbjct: 28  GLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTELGVEIRRLLLHGGH--VA 85

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  H+   +RPAL  G ++L DR+LDSS AYQG   S     +  L   
Sbjct: 86  PRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLSLW 145

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + ++PD T++LD   D+  +R   R         D  E++        R+ FL +A  
Sbjct: 146 ATEGLLPDLTVLLDGDPDLAERRTTGR------GAKDRLEQEGDAFRVALREQFLTLAEG 199

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
           +P+R  +VD+      VA +++  V   V++    L+
Sbjct: 200 EPERFVVVDADRPVDQVADDVIEAVVAAVRRHGVRLA 236


>gi|73663583|ref|YP_302364.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123641634|sp|Q49UZ1|KTHY_STAS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72496098|dbj|BAE19419.1| thymidylate kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 205

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I  + + L+ + Y V +TREPGG    E  R VLL    D+    
Sbjct: 4   FITFEGPEGSGKTTVIQQVAQKLENQ-YSVVLTREPGGVKTGEQIREVLLEG--DDMDDR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + P+L  GK++LCDR++DSS AYQG         + S+ E ++
Sbjct: 61  TEALLFAASRREHLVGKVIPSLENGKLVLCDRYIDSSLAYQGYARGIGIEEVKSINEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+ V +G +R+     L+     +  +++DV  HEK  + +  I  N+ 
Sbjct: 121 NGLYPDITIYLDVSVAVGRERI-----LKNQRNQNRLDQEDVKFHEKVVEGYKKIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +R  ++++  S   V       + + ++K
Sbjct: 176 ERFIVIEADRSIDEVVNATYESISKYLEK 204


>gi|283455190|ref|YP_003359754.1| thymidylate kinase [Bifidobacterium dentium Bd1]
 gi|283101824|gb|ADB08930.1| thymidylate kinase [Bifidobacterium dentium Bd1]
          Length = 252

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 27/221 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56
            G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL       
Sbjct: 11  QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 70

Query: 57  -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                            +     EA++FAA R  HV  VIRPAL  G +++ DR+LDSS 
Sbjct: 71  AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 130

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           AYQ          +  L   +   ++P+ T +LD+       R+++          D  E
Sbjct: 131 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 182

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
                   + R  FL++AR +P+R  ++D++ S + V   I
Sbjct: 183 SAGDDFQNRTRNAFLELARAEPERFRVIDASQSIEEVWQRI 223


>gi|119478164|ref|ZP_01618220.1| thymidylate kinase [marine gamma proteobacterium HTCC2143]
 gi|119448673|gb|EAW29917.1| thymidylate kinase [marine gamma proteobacterium HTCC2143]
          Length = 211

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG EG GK+T+I+ +   L   N    VTREPGGTP AE  R +LLS   +    
Sbjct: 1   MFITIEGGEGVGKSTNIAYIADQLSDANITCIVTREPGGTPLAEDIRQLLLSDRDEAIAD 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++  A+R  H+  VI PAL  G  ++CDRF D++YAYQG         + +L++  
Sbjct: 61  NTELLLMFASRAQHIAGVIEPALARGDWVICDRFTDATYAYQGGGRGLSEAKIANLEQWV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +++ PD TI+ D P+ +G+ R   R        LD  ER+     E  R  +L +A   
Sbjct: 121 QEDLRPDITILFDAPITVGMSRAGQR------GELDRIERERAAFFENVRNCYLMLAERH 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
            DR   VD++ +   V  ++  I+ E+
Sbjct: 175 SDRFRTVDASETLGRVQASLQPIIAEM 201


>gi|228905827|ref|ZP_04069725.1| Thymidylate kinase [Bacillus thuringiensis IBL 200]
 gi|228853767|gb|EEM98526.1| Thymidylate kinase [Bacillus thuringiensis IBL 200]
          Length = 208

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + +++   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQRAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|300723625|ref|YP_003712930.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061]
 gi|297630147|emb|CBJ90784.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061]
          Length = 209

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 117/217 (53%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT I  +   L++    D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTAIQTVAETLKQYGISDLIFTREPGGTPLAEKLRQLIKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GERLTDKAEVLMIYAARVQLVENVIKPALSKGTWVVGDRHDLSSQAYQGGGRGIDQNLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++    PD TI LDLP ++GL+R + R        LD  E++ +    + R  +L
Sbjct: 120 SLRDSALGCFYPDLTIYLDLPPEVGLERARER------GELDRIEKESLDFFHRTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++     D    +D+  S + V  +I + + + +Q++
Sbjct: 174 ELVAAN-DSIKKIDATQSLEKVRADIRHTLLQWLQEQ 209


>gi|329910241|ref|ZP_08275259.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546227|gb|EGF31265.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 205

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 9/210 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +   FI+FEGI+GAGK++H+S +   L  +   V  TREPGGTP  E  R VLL     +
Sbjct: 5   SKPKFITFEGIDGAGKSSHLSFVADLLVARGIRVTSTREPGGTPLGEQLRSVLLHQ---K 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  A+R +H+  VI PAL  G  ++ DRF D+++AYQG         L+ L+
Sbjct: 62  MHLETEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQGGGRHLPVAKLEQLE 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD T++ D+P+D+   R+        +  LD FE++        R  +L  A
Sbjct: 122 QWVHPHLQPDLTLLFDVPLDVARARLDA------TRSLDKFEQEQSDFFAGVRGEYLRRA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              P R  IVDS  S   V   +  I+  L
Sbjct: 176 AQFPARFRIVDSTQSMAQVRAALTAIMASL 205


>gi|209885250|ref|YP_002289107.1| thymidylate kinase [Oligotropha carboxidovorans OM5]
 gi|229621734|sp|B6JEC6|KTHY_OLICO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|209873446|gb|ACI93242.1| thymidylate kinase [Oligotropha carboxidovorans OM5]
          Length = 228

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 90/214 (42%), Positives = 126/214 (58%), Gaps = 3/214 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EG+GK+T I LL   L+ +  +  VTREPGG+P AE  RH+LLS      
Sbjct: 12  RGRFITFEGGEGSGKSTQIQLLAERLKGQGIETLVTREPGGSPGAEIVRHLLLSGVGKLL 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA+AE ++FAAAR DHV  VI PAL +G  +LCDRF DS+ AYQG        F+++L  
Sbjct: 72  GADAETLLFAAARDDHVHQVIEPALKKGVWVLCDRFTDSTAAYQGAAGKVDAAFIEALTH 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ ++ PD T+ILD+PV +GL R   R   R  A  D FE++ +  HE  R  +  IA 
Sbjct: 132 ATIGDLEPDLTLILDVPVAVGLHRAIKR---RGKAVADRFEQESLSFHESLRDAYRKIAA 188

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           + P RC +VD+     +V+  I   +   +   +
Sbjct: 189 DNPKRCAVVDANADAATVSERIWETMQHRLASAL 222


>gi|88856427|ref|ZP_01131085.1| thymidylate kinase [marine actinobacterium PHSC20C1]
 gi|88814294|gb|EAR24158.1| thymidylate kinase [marine actinobacterium PHSC20C1]
          Length = 209

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 6/211 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +GAGKTT   LL  +L+   + V VTREPGGT      R ++L    D   
Sbjct: 3   GLFITLEGGDGAGKTTQSKLLVHWLEEAGHTVVVTREPGGTDLGVELREIVLHRRGD-MD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA R  H+  V+RPAL  G I++ DR++DSS AYQG         +  L   
Sbjct: 62  PRAEALIYAADRAHHIATVVRPALERGDIVVQDRYIDSSEAYQGAGRVLGAEEVRDLSLW 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q ++PD T++LDL    G KR+ +  +       D  E +    H + R  FL+ A  
Sbjct: 122 ATQSLLPDVTVLLDLDPTDGRKRLDSART-----RYDRLEAEKQEFHTRVRDAFLERAAK 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +PDR  +VD+A     +A  I   +   + +
Sbjct: 177 EPDRILVVDAARDVAEIAAAIRERIQNHLTQ 207


>gi|182420064|ref|ZP_02951298.1| thymidylate kinase [Clostridium butyricum 5521]
 gi|237666856|ref|ZP_04526841.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376101|gb|EDT73688.1| thymidylate kinase [Clostridium butyricum 5521]
 gi|237658055|gb|EEP55610.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 211

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 4/209 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI FEG EG GKTT I  +  ++Q K+     TREPGG   +E  R V+L     
Sbjct: 1   MKKGLFIVFEGGEGTGKTTAIESIYDWIQEKDLKCIKTREPGGIKISEEIRQVILDKDNT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA+++AAAR  H+   + PAL EG ++LCDRF+DSS AYQG         + S+
Sbjct: 61  KMDGRTEALLYAAARRQHLVEKVIPALNEGYVVLCDRFIDSSLAYQGFARGLGIDEVMSI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++ E MPD +I+ DL   IGL+R+    S      ++  + + +  HEK R+ +  +
Sbjct: 121 NKFAIGEYMPDLSILFDLEPKIGLERI----STSGEREINRLDLEKIDFHEKVREGYNKV 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            R   DR   +++  S + V   I  I+ 
Sbjct: 177 YRENRDRIVRINAEQSKEGVLKEIKKILE 205


>gi|167836304|ref|ZP_02463187.1| thymidylate kinase [Burkholderia thailandensis MSMB43]
          Length = 206

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQEKLGPAGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R         +   D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASARRGA------ARMPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A+  P R  IVDS+     +   +  ++  L
Sbjct: 172 YLRRAQEAPHRFVIVDSSEPIPQIRKQLEGVLAAL 206


>gi|46199545|ref|YP_005212.1| thymidylate kinase [Thermus thermophilus HB27]
 gi|55981576|ref|YP_144873.1| thymidylate kinase [Thermus thermophilus HB8]
 gi|59798322|sp|Q72I89|KTHY_THET2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920831|sp|Q5SHX3|KTHY_THET8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46197171|gb|AAS81585.1| probable thymidylate kinase [Thermus thermophilus HB27]
 gi|55772989|dbj|BAD71430.1| probable thymidylate kinase (TMP kinase) [Thermus thermophilus HB8]
          Length = 198

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 109/209 (52%), Gaps = 14/209 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EG++G+GKTT    L  FL+ +   V +TREPGG       R +LL     E  
Sbjct: 3   GLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGGG--LPEVRSLLL---TQELS 57

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++F+A R +HV  VI P L  GK+++ DR+LDSS AYQG        +L  +   
Sbjct: 58  PEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLREVARE 117

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + P  T +LDLP +  L+RV+           D  E   +    + R+ +L +AR 
Sbjct: 118 ATRGLKPRLTFLLDLPPEAALRRVR---------RPDRLEGLGLEFFRRVREGYLALARA 168

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P R  ++D+    + +A  I   +  L+
Sbjct: 169 EPGRFVVLDATLPEEEIARAIQAHLRPLL 197


>gi|16801901|ref|NP_472169.1| thymidylate kinase [Listeria innocua Clip11262]
 gi|23821794|sp|Q927E8|KTHY_LISIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|16415376|emb|CAC98067.1| lin2841 [Listeria innocua Clip11262]
          Length = 208

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + ++    D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  I
Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQNGYEKI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  PDR   VD+  + + + T IL  + + +
Sbjct: 176 IQMFPDRFMRVDATKTPEEITTIILADILKQL 207


>gi|301169177|emb|CBW28774.1| thymidylate kinase [Haemophilus influenzae 10810]
          Length = 219

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEKMDLDFFHRTRASYLELV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213


>gi|188583893|ref|YP_001927338.1| dTMP kinase [Methylobacterium populi BJ001]
 gi|179347391|gb|ACB82803.1| dTMP kinase [Methylobacterium populi BJ001]
          Length = 236

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 88/203 (43%), Positives = 121/203 (59%), Gaps = 10/203 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARHVLL 55
            G+FI+FEG EGAGK+T I+ L   L+ +          +  TREPGGTP AEA R  LL
Sbjct: 7   RGVFITFEGGEGAGKSTQIARLAATLRDEGGGREGRGREIVTTREPGGTPRAEALRAALL 66

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                 +G  AEA++FAAAR+DH+EN IRPAL  G I+LCDRF DS+ AYQG     +  
Sbjct: 67  RGVAKPYGPFAEALMFAAARIDHIENRIRPALARGAIVLCDRFSDSTRAYQGAAGGLEPE 126

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + SL+ +++ ++ PD T+ILDLP + GL R Q+R         D FE + +  H++ R 
Sbjct: 127 LIASLERVTLGDLRPDLTLILDLPPEAGLARAQSRGG---GEPADRFEAEGMRFHQRLRT 183

Query: 176 IFLDIARNQPDRCHIVDSAHSFQ 198
            F  IA  +P+RC I+D+     
Sbjct: 184 AFRAIAEAEPERCRIIDADLGPD 206


>gi|319891435|ref|YP_004148310.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161131|gb|ADV04674.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03]
 gi|323465395|gb|ADX77548.1| thymidylate kinase [Staphylococcus pseudintermedius ED99]
          Length = 205

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 8/211 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ EG EG+GKTT +  +   L  ++YDV  TREPGG   AEA R +LL    +   A
Sbjct: 3   LFITIEGPEGSGKTTVVQAVSEQL-AQHYDVMTTREPGGVQTAEAIRQILLDG--ETMDA 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA+R +H+   + PAL +G++++CDRF+DSS AYQG         + ++ + +
Sbjct: 60  RTEALLFAASRREHLVAKVLPALSQGRLVICDRFIDSSLAYQGYARKIGVKEVQAINDFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   PD TI LD+P ++G  R+++          +  +++ V  HE+  + +  +    
Sbjct: 120 IEGRYPDLTIYLDIPAEVGRTRIES-----NRRAQNRLDKESVAFHERVVEGYQQLIAQD 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P R  ++++  S + V T  L ++ + +  +
Sbjct: 175 PKRFAVINANQSIEQVVTAALQVILQKIDAQ 205


>gi|145628830|ref|ZP_01784630.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
 gi|144979300|gb|EDJ88986.1| thymidylate kinase [Haemophilus influenzae 22.1-21]
          Length = 210

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 122 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAVKNW 204


>gi|228918981|ref|ZP_04082361.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228840630|gb|EEM85891.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 208

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQLIEDKL 207


>gi|205372020|ref|ZP_03224838.1| thymidylate kinase [Bacillus coahuilensis m4-4]
          Length = 210

 Score =  242 bits (618), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 4/212 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SG FI+ EG EGAGKTT +  L   LQ ++ D   TREPGG   AE  R ++L+     
Sbjct: 3   KSGYFITVEGPEGAGKTTVVKRLLERLQEESIDAVATREPGGIAIAEDIRSIILNPENTS 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   + PAL +GK+++CDRFLDSS AYQG         + ++ 
Sbjct: 63  MDPRTEALLYAAARRQHLVEKVLPALEDGKVIICDRFLDSSLAYQGYARGLGVDEVLNIN 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E ++   MP  T+  D+  + GL+R+  R   RE   ++  + + +  H K  + +  + 
Sbjct: 123 EFAIDGCMPSLTLFFDISPEAGLERI-ARNKGRE---INRLDLEGIEFHHKVYEGYKKVI 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               +R  +V++      V    L I+   ++
Sbjct: 179 SRNKNRVQLVNADQDVHQVVEEALQIILHHIK 210


>gi|317126771|ref|YP_004093053.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522]
 gi|315471719|gb|ADU28322.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522]
          Length = 213

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 4/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+FI+FEG EGAGKTT +  +K  L+  +  V +TREPGG+  AE  R V+L+    E 
Sbjct: 2   SGVFITFEGGEGAGKTTVLKEIKDRLEASDEKVVMTREPGGSIIAEKIRDVILNPDHTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + P L +G I+LCDRF+DSS  YQG         + ++  
Sbjct: 62  DARTEALLYAAARRQHLVEKVFPYLDKGYIVLCDRFIDSSLVYQGVARKIGIEEVLNINL 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +    MP  T+  D+   IGL+R+        +   +  +R+ +  H   R+ + ++  
Sbjct: 122 FATGGFMPSKTLFFDIDPKIGLERIAK----HGNREFNRLDREALDFHYIVRKAYHELQG 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +PDR  +VD++ S   V       V+++VQ +
Sbjct: 178 REPDRIEMVDASLSLTEVIEAAWTKVFDIVQAK 210


>gi|254293993|ref|YP_003060016.1| thymidylate kinase [Hirschia baltica ATCC 49814]
 gi|254042524|gb|ACT59319.1| thymidylate kinase [Hirschia baltica ATCC 49814]
          Length = 211

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 82/218 (37%), Positives = 126/218 (57%), Gaps = 10/218 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GV 59
           MN G F++ EG EG GK+T  S L++ L   +    +TREPGG+   EA R+++L+    
Sbjct: 1   MNLGRFVTLEGGEGVGKSTLASNLQKKLLELDIKCLLTREPGGSLGGEAIRNIVLNPPHH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            ++    + ++F AAR DH+ENVI+PAL+ G+ ++CDRF DS+ AYQ          + +
Sbjct: 61  QDWSPLTQTLLFFAARCDHLENVIKPALLRGEWVICDRFTDSTRAYQAVAGGVDDHVVST 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L ++ V E  PD T++LD+P+++  KR   R     +   D FE+     HE  RQ FL+
Sbjct: 121 LDQLVVNEQQPDLTLLLDMPLEVSAKRRIER-----NGPQDAFEKLPQSFHENVRQAFLE 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           IA    DRC+++D+++S   V    L    EL+ KR S
Sbjct: 176 IADRYKDRCYVLDASNSVDQVTAEAL----ELICKRFS 209


>gi|281490940|ref|YP_003352920.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
 gi|281374698|gb|ADA64218.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
          Length = 211

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 4/208 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   ++  TREPGG   AE  R ++L     E 
Sbjct: 2   NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++FAAAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+  D+  D+ L+R+        +  ++  + +   +H K R+ +L+I  
Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVV 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+R   +D++   + V  + L+++ +
Sbjct: 178 KEPERFVKIDASQPLEKVVADTLSVLKK 205


>gi|326328861|ref|ZP_08195195.1| dTMP kinase [Nocardioidaceae bacterium Broad-1]
 gi|325953346|gb|EGD45352.1| dTMP kinase [Nocardioidaceae bacterium Broad-1]
          Length = 216

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 9/214 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F+ FEG EG+GK+T   LL   L  + + V +T EPG T   +  R ++LS    +  
Sbjct: 11  GVFVCFEGGEGSGKSTQSRLLHEALTARGHRVLLTFEPGDTAVGKDVRRIVLSPETGDLD 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA + +H+E+++RPAL  G++++ DR++DS  AYQG         L+ +   
Sbjct: 71  DRTEALLFAADKAEHIESMVRPALERGEVVITDRYVDSMLAYQGAGRVLDAAQLEEVARW 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++ P  T++LDL    G  R + R         D  E++    HE+ R  F+ +A  
Sbjct: 131 ATADLRPHLTVLLDLDPTAGFTRFEER---------DRMEQESQQFHERVRSAFVALAER 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            PD   ++D+    + +   +L  +  L+ + V+
Sbjct: 182 NPDHYLVLDARAPVEEIHAAVLARLEPLLDQAVT 215


>gi|283783708|ref|YP_003374462.1| dTMP kinase [Gardnerella vaginalis 409-05]
 gi|283441867|gb|ADB14333.1| dTMP kinase [Gardnerella vaginalis 409-05]
          Length = 234

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 114/213 (53%), Gaps = 10/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFISFEGI+G GKTT +  LK +LQ    +V VTREPGGT   +  R +LL      
Sbjct: 28  NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAA R  HV  VIRPAL  G +++ DR++DSS AYQ          + +L 
Sbjct: 86  VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQAGGRELTMDDVRTLS 145

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   + P+ T +LD+  +   KR+            D  E   +    + R+ FLD+A
Sbjct: 146 EWATDSLWPNRTYLLDMQPEDAFKRLH--------REQDRMESAGIDFARRTREAFLDLA 197

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   DR  ++D+  S +S+   I+  V  L+++
Sbjct: 198 QESADRYRVLDATFSAKSLFELIVQDVHNLIKE 230


>gi|197284751|ref|YP_002150623.1| thymidylate kinase [Proteus mirabilis HI4320]
 gi|227357756|ref|ZP_03842105.1| thymidylate kinase [Proteus mirabilis ATCC 29906]
 gi|194682238|emb|CAR41959.1| thymidylate kinase [Proteus mirabilis HI4320]
 gi|227162085|gb|EEI47099.1| thymidylate kinase [Proteus mirabilis ATCC 29906]
          Length = 214

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 9/221 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M +  FI  EG+EGAGKT+ I  +   L+++   D+  TREPGGTP AE  R ++     
Sbjct: 1   MKNSKFIVIEGLEGAGKTSAIQTVVDTLKQQGITDLAFTREPGGTPLAEKLRELIKQGIE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         + 
Sbjct: 61  GEKVTDKAELLMLYAARVQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRGIDKALMK 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDL   +GL R + R        LD  E++ +    + R+ + 
Sbjct: 121 SLRDTVLADFKPDLTLYLDLDPAVGLARARAR------GELDRIEKESMDFFYRTRERYQ 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
            +A+        +D++     V  +I +++ + + +  S L
Sbjct: 175 ALAKEDAS-IITIDASQDIDKVQADIRDVLNQWLTQENSAL 214


>gi|298252464|ref|ZP_06976259.1| thymidylate kinase [Gardnerella vaginalis 5-1]
 gi|297533354|gb|EFH72237.1| thymidylate kinase [Gardnerella vaginalis 5-1]
          Length = 234

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 114/213 (53%), Gaps = 10/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFISFEGI+G GKTT +  LK +LQ    +V VTREPGGT   +  R +LL      
Sbjct: 28  NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAA R  HV  VIRPAL  G +++ DR++DSS AYQ          + +L 
Sbjct: 86  VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQAGGRELTKDDVRTLS 145

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   + P+ T +LD+  +   KR+            D  E   +    + R+ FLD+A
Sbjct: 146 EWATDSLWPNRTYLLDMQPEDAFKRLH--------REQDRMESAGIDFARRTREAFLDLA 197

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   DR  ++D+  S +S+   I+  V  L+++
Sbjct: 198 QESADRYRVLDATFSAKSLFELIVQDVHNLIKE 230


>gi|229094752|ref|ZP_04225758.1| Thymidylate kinase [Bacillus cereus Rock3-29]
 gi|229113705|ref|ZP_04243141.1| Thymidylate kinase [Bacillus cereus Rock1-3]
 gi|228669702|gb|EEL25108.1| Thymidylate kinase [Bacillus cereus Rock1-3]
 gi|228688620|gb|EEL42492.1| Thymidylate kinase [Bacillus cereus Rock3-29]
          Length = 208

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  +IGL R++          ++  + +D+  H++ R+ +L++  
Sbjct: 122 FATEDCMPSVTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLEVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|77464120|ref|YP_353624.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1]
 gi|126462963|ref|YP_001044077.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17029]
 gi|123591351|sp|Q3J0G1|KTHY_RHOS4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223108|sp|A3PLT9|KTHY_RHOS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|77388538|gb|ABA79723.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1]
 gi|126104627|gb|ABN77305.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17029]
          Length = 217

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 115/212 (54%), Gaps = 1/212 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F++ EGI+G+GK+  +  L   L  +  DV VTREPGGTP  EA R ++L+   + +
Sbjct: 4   QGFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR+ HV  VI PAL +G++++ DR+  S+ AYQG        F+ +L  
Sbjct: 64  DPMAELLLMTAARVQHVRRVIAPALAQGRVVISDRYAGSTLAYQGTGRGLSEAFIRTLHA 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  ++ PD T++LDL   IGL R + R +  E+     FE  D+  HE+ R  FL  A 
Sbjct: 124 EATGDLWPDLTLVLDLEAGIGLARSRRRLTG-ETLDEGRFESLDLAFHERIRAAFLAQAA 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             P R  ++D++ + + V       +   + +
Sbjct: 183 RDPGRHAVIDASGTPEEVQARACAALAPFLAQ 214


>gi|229027878|ref|ZP_04184033.1| Thymidylate kinase [Bacillus cereus AH1271]
 gi|228733392|gb|EEL84219.1| Thymidylate kinase [Bacillus cereus AH1271]
          Length = 208

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  +IGL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +VD+    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVDADQPMEKLIEEVVQIIEDKL 207


>gi|30018302|ref|NP_829933.1| thymidylate kinase [Bacillus cereus ATCC 14579]
 gi|229125548|ref|ZP_04254581.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4]
 gi|229142836|ref|ZP_04271279.1| Thymidylate kinase [Bacillus cereus BDRD-ST24]
 gi|296500863|ref|YP_003662563.1| thymidylate kinase [Bacillus thuringiensis BMB171]
 gi|46576501|sp|Q81JB5|KTHY_BACCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|29893842|gb|AAP07134.1| Thymidylate kinase [Bacillus cereus ATCC 14579]
 gi|228640599|gb|EEK96986.1| Thymidylate kinase [Bacillus cereus BDRD-ST24]
 gi|228657865|gb|EEL13670.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4]
 gi|296321915|gb|ADH04843.1| thymidylate kinase [Bacillus thuringiensis BMB171]
          Length = 208

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKIFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|218231073|ref|YP_002364880.1| thymidylate kinase [Bacillus cereus B4264]
 gi|226732652|sp|B7HIJ8|KTHY_BACC4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218159030|gb|ACK59022.1| dTMP kinase [Bacillus cereus B4264]
          Length = 208

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEKYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|322420736|ref|YP_004199959.1| thymidylate kinase [Geobacter sp. M18]
 gi|320127123|gb|ADW14683.1| thymidylate kinase [Geobacter sp. M18]
          Length = 223

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 4/213 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG+EG GKTT + LLK  L+     V  TREPGG P A+  R +LL        
Sbjct: 2   GFFITFEGVEGCGKTTQLRLLKERLESAGEQVVATREPGGCPIADQMRAILLDAKNSAIT 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++AAAR  HV+ VI PAL  G+ +LCDRF D++ AYQG         +  L  +
Sbjct: 62  PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRELDLDVIRQLNAL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V P  T+++D PV+IGL R  +R      A  + FE + V  HE+ R  +L +A+ 
Sbjct: 122 ATGGVEPAVTVLIDCPVEIGLSRALSRIEATSGAREERFELESVRFHERVRAGYLSLAKA 181

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            P R  +VD +            +V   ++ R+
Sbjct: 182 FPRRFVVVDGSGDV----AKTEKLVTAALKDRL 210


>gi|116874058|ref|YP_850839.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123458754|sp|A0AM28|KTHY_LISW6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116742936|emb|CAK22060.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 208

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 71/212 (33%), Positives = 118/212 (55%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + ++    D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  I
Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDISYHEKVQAGYEKI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  PDR   VD+    + +   IL  + + +
Sbjct: 176 IKMFPDRFMRVDATMQPEEITEVILADILQQL 207


>gi|255023366|ref|ZP_05295352.1| thymidylate kinase [Listeria monocytogenes FSL J1-208]
          Length = 208

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  I
Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   VD+  + + +   IL  +   +
Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207


>gi|304312953|ref|YP_003812551.1| Thymidylate kinase [gamma proteobacterium HdN1]
 gi|301798686|emb|CBL46918.1| Thymidylate kinase [gamma proteobacterium HdN1]
          Length = 216

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I+ EG EG GK+T++  ++  L  +      TREPGGTP AE  R +LL+   +
Sbjct: 1   MKPGLLITLEGTEGVGKSTNLQFIRDTLSEQKIPFICTREPGGTPLAETLRELLLAPRDE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F   AE ++  AAR  H+ +VIRPAL  G  ++CDRF D+++AYQG         +  L
Sbjct: 61  PFDPLAELLIMFAARAQHIAHVIRPALERGLWVICDRFTDATFAYQGGGRGVPMNIIAQL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  +E+ PD  I+LD+   +GL+R   R      A  D FER+     E+ R ++L+ 
Sbjct: 121 EALVQRELRPDAVILLDISPQLGLERAGQR------AAPDRFERERCEFFERVRSVYLER 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R + VD++     V   + +I+  +
Sbjct: 175 ADADPARYYRVDASRPLVDVQQELKDILARI 205


>gi|116511255|ref|YP_808471.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11]
 gi|122940342|sp|Q031S3|KTHY_LACLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116106909|gb|ABJ72049.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11]
          Length = 211

 Score =  241 bits (617), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   +V  TREPGG   AE  R ++L     E 
Sbjct: 2   NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++F AAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFEAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+  D+  D+ L+R+        +  ++  + +   +H K R+ +L+I  
Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+R   +D++ S + V  + L ++ +
Sbjct: 178 KEPERFVKIDASQSLEKVVADTLEVLKK 205


>gi|294636822|ref|ZP_06715157.1| dTMP kinase [Edwardsiella tarda ATCC 23685]
 gi|291089965|gb|EFE22526.1| dTMP kinase [Edwardsiella tarda ATCC 23685]
          Length = 213

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 10/219 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M S  FI  EG+EGAGKTT   ++   L+R    +V  TREPGGTP AE  R ++     
Sbjct: 1   MKS-KFIVIEGLEGAGKTTARDVVVEELRRHGVQEVVFTREPGGTPLAEQLRQLVKEGCA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 60  GETLTDRAEVLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGIDPQLLQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  +    PD T+ LD+P + GL R ++R        LD  ER+ +   E+ R  +L
Sbjct: 120 TLRDTVLGSFKPDLTLYLDIPPEQGLARARSR------GELDRIERESLAFFERTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +A    +R   +D++     V+  I   +   + ++ +
Sbjct: 174 ALASQD-ERIVTLDASQPLAQVSDAIRQALQAWLARQEA 211


>gi|253989189|ref|YP_003040545.1| thymidylate kinase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253780639|emb|CAQ83801.1| thymidylate kinase [Photorhabdus asymbiotica]
          Length = 212

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKT+ +  +   L++    D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTSAMKTVVELLKQHGIQDLVFTREPGGTPLAEKLRELIKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  DEPLTDKAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDKNLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+   +    PD TI LDLP  IGL R   R        LD  E++ +   ++ R  +L
Sbjct: 120 SLRNTVLGSFRPDLTIYLDLPPQIGLLRACQR------GELDRIEKESMDFFDRTRSCYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + A         VD++     V  +I  ++ + ++++
Sbjct: 174 EFASQDKS-IVTVDASQPIDRVQADICQVLEQWLKQQ 209


>gi|15672380|ref|NP_266554.1| thymidylate kinase [Lactococcus lactis subsp. lactis Il1403]
 gi|14285511|sp|Q9CIG4|KTHY_LACLA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12723271|gb|AAK04496.1|AE006276_11 thymidylate kinase [Lactococcus lactis subsp. lactis Il1403]
 gi|326405974|gb|ADZ63045.1| thymidylate kinase [Lactococcus lactis subsp. lactis CV56]
          Length = 211

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 4/208 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ IS EG +GAGKTT +  +   +Q+   ++  TREPGG   AE  R ++L     + 
Sbjct: 2   NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTDI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            ++ E ++FAAAR  H++  + PAL  GK+++ DRF+DSS AYQG         +D L  
Sbjct: 62  DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+  D+  D+ L+R+        +  ++  + +   +H K R+ +L+I  
Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVV 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+R   +D++   + V  + L+++ +
Sbjct: 178 KEPERFVKIDASQPLEKVVADTLSVLKK 205


>gi|163856816|ref|YP_001631114.1| thymidylate kinase [Bordetella petrii DSM 12804]
 gi|229487582|sp|A9INL0|KTHY_BORPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|163260544|emb|CAP42846.1| tmk [Bordetella petrii]
          Length = 207

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG++GAGK+TH + L   L+     V  TREPGGTP  E  R ++LS   +  
Sbjct: 4   RGRFITLEGVDGAGKSTHAAWLADALRDMGRTVVATREPGGTPLGETLRGLVLS---ESM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E ++  AAR +H+  VI PAL  G  ++CDR+ D++YAYQG         +  L++
Sbjct: 61  TLDTETLLMFAARCEHLTQVIEPALARGDWVVCDRYTDATYAYQGGGRQLGADRIAVLEQ 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T + D+P+++   R+       ++   D FER++    E+ R  +L  A+
Sbjct: 121 WMRPALQPDRTWLFDVPLELARARLA------DARLPDRFEREEAAFFERTRAAYLARAQ 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             P R  IVDS+     V   +   +  L +
Sbjct: 175 AHPGRIRIVDSSRPVTEVRAQLHAELQALAE 205


>gi|186686536|ref|YP_001869732.1| thymidylate kinase [Nostoc punctiforme PCC 73102]
 gi|238691253|sp|B2IZE7|KTHY_NOSP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|186468988|gb|ACC84789.1| thymidylate kinase [Nostoc punctiforme PCC 73102]
          Length = 211

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I FEG+EG GKT+ + L  ++L+     V VTREPGGT      R +LL    D+ 
Sbjct: 2   GGKLIVFEGVEGCGKTSQMQLCSQWLESLGVSVVVTREPGGTELGLHLRRLLLEKAEDKP 61

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            AE  E +++AA R  HVE  ++P L  GK +LCDR+ DS+ AYQG         ++ L 
Sbjct: 62  VAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTIAYQGYGRGLNMSLINQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+   +  D TI LD+ V++GL R +      +   LD  E++ +  H + +Q + ++A
Sbjct: 122 YIATAGLESDLTIWLDIDVEVGLTRKRG-----DGIALDRIEQETIAFHRRVQQGYAELA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            + P R   VD + S ++V   I  I+   ++
Sbjct: 177 ASYPSRIVRVDGSLSKEAVQQVIQEILRVHLK 208


>gi|227824456|ref|ZP_03989288.1| thymidylate kinase [Acidaminococcus sp. D21]
 gi|226904955|gb|EEH90873.1| thymidylate kinase [Acidaminococcus sp. D21]
          Length = 205

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 7/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+ EG +G+GKTT    LK +L+ K  +V +TREPGGT  AE  R + LS  + 
Sbjct: 1   MKKGLFITLEGPDGSGKTTQAKRLKAYLETKGREVVLTREPGGTGLAETLRSLALSPEIT 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E+++  AAR DHV+ VIRPAL  GK+++CDRF DS+  YQG         L+ L
Sbjct: 61  -MSKRVESLLHVAARADHVDKVIRPALEAGKVVICDRFSDSTLIYQGILGGMDLDELERL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                + + PD T ++D    + L R + R         D FE + ++  EK RQ +L +
Sbjct: 120 SLFGSKGLSPDVTFLIDGNPRVLLSRREAR------GVTDKFEAQGLLFQEKIRQGYLTL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R  ++D   +  SV   ++  V + +
Sbjct: 174 LDRYPERMILIDGEGTPDSVTDALIKKVEKFL 205


>gi|262276042|ref|ZP_06053851.1| thymidylate kinase [Grimontia hollisae CIP 101886]
 gi|262219850|gb|EEY71166.1| thymidylate kinase [Grimontia hollisae CIP 101886]
          Length = 211

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EG+EGAGKTT I  +   L+ +    +  TREPGGTP AE  R ++     
Sbjct: 1   MKNGKFIVVEGLEGAGKTTAIRNVIDILKAQGIAHIETTREPGGTPLAEQMRTLVKEGHP 60

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE     AE ++  AAR+  V+NVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 61  DEPLTDMAELLLLYAARIQLVDNVIKPALAKGAYVVGDRHDMSSQAYQGGGRGFDKALMQ 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  + +  PD T+ LDL   IGL+R + R        LD  E+ ++    + R  +L
Sbjct: 121 NLRDTVLGDFRPDFTLYLDLDPAIGLERARAR------GELDRIEQMELDFFHRTRARYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           ++A N+ +   I+D++ S ++V+ +I   +   + 
Sbjct: 175 ELA-NEDENVVIIDASQSIENVSADIRKALEHWLN 208


>gi|194334267|ref|YP_002016127.1| dTMP kinase [Prosthecochloris aestuarii DSM 271]
 gi|238693337|sp|B4S8U3|KTHY_PROA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|194312085|gb|ACF46480.1| dTMP kinase [Prosthecochloris aestuarii DSM 271]
          Length = 223

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 8/218 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+GAGK+T + +L++ L  K  +V   REPGGT  +E+ R +LL    D    
Sbjct: 1   MFITFEGIDGAGKSTQVKMLRKLLISKGLEVLTLREPGGTDISESIRDILLEVKND-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++FAA+R + V+ VI+PAL +   +L DRF DS+ AYQG         L  +  I+
Sbjct: 60  IGELLLFAASRAELVQKVIKPALSDHATVLLDRFYDSTSAYQGYGRGLDLALLHQINRIA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LDL  +  + R  +  SL    E   LD  ER  +  + + R  +  IA
Sbjct: 120 SCSLEPDITFYLDLSPEDAMIRKFSEKSLPLAFEDEELDRMERSGLEFYTRVRNGYQTIA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW----ELVQKR 215
            +QP R   +D+     ++   I   +      L+QK+
Sbjct: 180 ASQPRRVVTIDATLEPDAIHRKITETIMSRRGSLLQKK 217


>gi|269976291|ref|ZP_06183287.1| thymidylate kinase [Mobiluncus mulieris 28-1]
 gi|269935620|gb|EEZ92158.1| thymidylate kinase [Mobiluncus mulieris 28-1]
          Length = 246

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60
             G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G   
Sbjct: 29  TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 88

Query: 61  ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+        
Sbjct: 89  VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 148

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L   +   + P+ T++LDL  +I  +R   + +       D  E + +    K R  
Sbjct: 149 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMEGEGLEFQRKVRAR 205

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  +A    +   +VD++ + + +A  +   +  ++
Sbjct: 206 FRRLAEEN-ETWMVVDASLTPEEIAAQVRLRLASVL 240


>gi|226941613|ref|YP_002796687.1| thymidylate kinase [Laribacter hongkongensis HLHK9]
 gi|226716540|gb|ACO75678.1| KthY [Laribacter hongkongensis HLHK9]
          Length = 214

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 7/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EGI+GAGK+TH+  ++ +L  +  ++ VTREPGGTP  E+ R +LL     +  
Sbjct: 8   GLFLTLEGIDGAGKSTHVGFVRDYLTARGINLVVTREPGGTPVGESLRSLLLDVQ-SQVS 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H++ VIRPAL  G  +L DRF D++YA+QG         + +L+  
Sbjct: 67  LDTETLLMFAARQAHLDAVIRPALARGDWVLSDRFTDATYAFQGGGRGVPFARIATLENW 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             Q + PDCT + D+P+     R+Q          LD FE++    H + R  +L  A +
Sbjct: 127 VQQGLQPDCTFLFDVPLATAQARMQG------VRQLDRFEQEASDFHARVRDAYLRRAAD 180

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P R  ++D+  S  ++   +   + +L+
Sbjct: 181 EPQRFCLLDARQSIGALQALLAQELDQLL 209


>gi|325576842|ref|ZP_08147457.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392]
 gi|325161048|gb|EGC73166.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392]
          Length = 210

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK+T +  +   L+     D+  TREPGGTP AE  RH++     + 
Sbjct: 2   QGKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PAL EGKI+L DR   SS AYQG         + +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + +  PD  + LD+    GL R + R        LD  E++ +    + RQ +L++ 
Sbjct: 122 NMVLGDFEPDFVLYLDIDPAEGLARARGR------GELDRIEQQGLDFFHRTRQRYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +N P +  I+++      V  +I + V   
Sbjct: 176 QNNP-KAAIINAGQPLAQVQADIQSAVKNW 204


>gi|254455158|ref|ZP_05068593.1| thymidylate kinase [Octadecabacter antarcticus 238]
 gi|198263568|gb|EDY87840.1| thymidylate kinase [Octadecabacter antarcticus 238]
          Length = 215

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 115/209 (55%), Gaps = 10/209 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEGI+G+GK+T   LLK  L     D  +TREPGG+  AE  R +LL+   D + 
Sbjct: 14  GLFISFEGIDGSGKSTQTKLLKDRLP----DAVLTREPGGSAGAEEIRALLLTGDPDRWS 69

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  IRPAL  GK ++CDRF DS+  YQG    +    +D+L ++
Sbjct: 70  AETEILLFTAARRDHLEKTIRPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHDV 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T I+D+   + L R   R S       D FE   +   E  R  FL +A+ 
Sbjct: 130 MI-GREPDLTFIIDMDPAVALSRGLARGS-----GEDRFEDMGLAFQETLRHGFLALAKA 183

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            PDRC ++D      +VA  I   V + +
Sbjct: 184 NPDRCVLIDGNRDPVAVAAEITVHVADRM 212


>gi|294083926|ref|YP_003550683.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663498|gb|ADE38599.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 214

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 7/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           SG+ I+FEG EG+GKTT I  L ++L+ +  N ++ VTREPGGT  AE  R +L+    D
Sbjct: 2   SGILITFEGGEGSGKTTQIQSLVKWLESEFSNTELVVTREPGGTEGAELIRDLLVRGASD 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    EA++ +A+R +H++NVI PAL + KI++ DRF DS+  YQG         + +L
Sbjct: 62  RWQPITEALLMSASRHEHIKNVIEPALAQNKIVISDRFFDSTTIYQGIVGGVDAQAVATL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +++   V+PD T ++D+   +GL R  NR           FE K +  H+K R  FL +
Sbjct: 122 TKLACGNVIPDLTFLMDMDAKVGLARAGNRDDDET-----RFEEKGLSFHQKVRDAFLKL 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A    +R  IVD+  +   +A  I N V  LV
Sbjct: 177 AHMNENRFVIVDATKTTSEIADIIRNKVATLV 208


>gi|119963206|ref|YP_946682.1| thymidylate kinase [Arthrobacter aurescens TC1]
 gi|119950065|gb|ABM08976.1| thymidylate kinase [Arthrobacter aurescens TC1]
          Length = 229

 Score =  241 bits (616), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 5/216 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+FEG +GAGK+T  + L   L+ +   V  TREPGGTP  E  R ++L  G   
Sbjct: 5   SPGLFIAFEGGDGAGKSTQAARLSDALESQGLSVLRTREPGGTPIGEKLRSLVLDHGNGT 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H   VIRPAL  G +++ DR++DSS AYQG         + SL 
Sbjct: 65  IDPRTEALMFAAARAAHASQVIRPALAGGTVVITDRYIDSSVAYQGAGRGLGAEGVLSLN 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E + + + PD T++LD+    G +R          A  D  E +    H   R  FLD+A
Sbjct: 125 EWATEGLHPDLTVLLDVDPSDGRQR-----RTAGDATEDRLESEPDHFHSAIRHAFLDLA 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              P    ++ ++   +++A  IL  V  L+  R+S
Sbjct: 180 AAAPSSYLVLAASADIETLAAQILERVETLLGDRIS 215


>gi|257784894|ref|YP_003180111.1| thymidylate kinase [Atopobium parvulum DSM 20469]
 gi|257473401|gb|ACV51520.1| thymidylate kinase [Atopobium parvulum DSM 20469]
          Length = 219

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 7/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+ EG++G GK+T  SLL+  L+  N+DV   REPGGT  +E  R V+L+     
Sbjct: 8   SQGLFITLEGVDGCGKSTQASLLREDLKALNFDVVFVREPGGTAISEQIRDVVLNPKNGA 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E +++ A+R   VE VIRPAL  GK++LCDRF DS+YAYQ          +    
Sbjct: 68  MCDECELLLYEASRAQLVEEVIRPALASGKVVLCDRFYDSTYAYQAAGRGLDTDLVHHAN 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +    V PD T++  L   +   R             D  E + V   E+    +  + 
Sbjct: 128 RLGSCGVSPDRTLVFMLEPTVAHARATQ-------NDTDRLEAEGVAFQERVFAGYKQLL 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +++P+R   +D+  S   V T    ++ +L+
Sbjct: 181 QDEPERVKAIDADGSIDEVRTRTRQLLADLI 211


>gi|290891876|ref|ZP_06554873.1| thymidylate kinase [Listeria monocytogenes FSL J2-071]
 gi|290558470|gb|EFD91987.1| thymidylate kinase [Listeria monocytogenes FSL J2-071]
          Length = 208

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  +
Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   VD+  + + +   IL  +   +
Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207


>gi|329766836|ref|ZP_08258365.1| thymidylate kinase [Gemella haemolysans M341]
 gi|328838562|gb|EGF88168.1| thymidylate kinase [Gemella haemolysans M341]
          Length = 208

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 63/214 (29%), Positives = 116/214 (54%), Gaps = 7/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG +G+GKT+ I+    +L RK Y V  TREPGGT  +E  R +L     D  
Sbjct: 2   KGKFITVEGSDGSGKTSFINFATEYLTRKGYKVITTREPGGTDFSEKVRELLFDSSND-I 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E+++F A+R DH+   I P + EG I++CDRF+DSS AYQ          +  +  
Sbjct: 61  DAKTESLLFCASRRDHIVKKILPHVNEGYIVICDRFVDSSVAYQSYGRGLSKQDILDINA 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+   + V++GL R +NR         +  +++ +  ++  ++ + D+++
Sbjct: 121 YATDNLEPDLTLYFSVDVEVGLARTKNRDDN------NRMDQESLDFYKNVKRGYDDLSK 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              +R  ++D++ ++++V    L+I+   +   +
Sbjct: 175 ENTERIKVIDASDTYENVQKQALSILEGFLDNEL 208


>gi|222152173|ref|YP_002561333.1| putative thymidylate kinase homolog [Macrococcus caseolyticus
           JCSC5402]
 gi|222121302|dbj|BAH18637.1| putative thymidylate kinase homolog [Macrococcus caseolyticus
           JCSC5402]
          Length = 204

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 114/208 (54%), Gaps = 7/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG EG+GKTT I  +   L  + +DV  TREPGG   +E  R +LL    +     
Sbjct: 4   FITIEGPEGSGKTTVIKAIADHLIAR-FDVVCTREPGGIKISEDIRKILLD-EANVMDYR 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R  H+   + PAL +G+I++CDRF+DSS AYQG         + S+ E ++
Sbjct: 62  TEALLFAASRRQHLIEKVLPALQKGEIVICDRFIDSSLAYQGYARGIGMDEIRSINEFAI 121

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           +   PD T+ L +  +IGL R++       S   +  +++ +  HE+  + +  +A   P
Sbjct: 122 EGKYPDLTLYLKVSAEIGLNRIK-----DNSRETNRLDKEAIDFHEQVVEGYDILAAQYP 176

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R  I+D+  S + V +  +  + +L+ 
Sbjct: 177 ERIRIIDAEQSPEQVVSESMKWINQLLN 204


>gi|167586965|ref|ZP_02379353.1| dTMP kinase [Burkholderia ubonensis Bu]
          Length = 201

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 100/208 (48%), Gaps = 13/208 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ K       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGRFITFEGIDGAGKTTHLEWFCERLQDKLAGAGRQVVVTREPGGTQLGEKLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  AAR +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +  +R         +   D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFARTRGE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204
           +L  A   P R  IVD+  S   +   +
Sbjct: 172 YLRRAAEAPHRFAIVDATQSIPEIRRQL 199


>gi|170023932|ref|YP_001720437.1| thymidylate kinase [Yersinia pseudotuberculosis YPIII]
 gi|238688405|sp|B1JI38|KTHY_YERPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169750466|gb|ACA67984.1| dTMP kinase [Yersinia pseudotuberculosis YPIII]
          Length = 212

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + E  PD T+ LDLP  +GL R + R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A +       +D++   + V+ +I   + + +  +
Sbjct: 174 ELAASDAS-IKTIDASQPIEQVSASISQALAQWLTNQ 209


>gi|212712810|ref|ZP_03320938.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM
           30120]
 gi|212684502|gb|EEB44030.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM
           30120]
          Length = 208

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58
           M +  FI  EG+EGAGKTT I+ +   L +   +D+  TREPGGTP AE  R ++     
Sbjct: 1   MKN-QFIVIEGLEGAGKTTAINTVVETLTQAGVHDMVFTREPGGTPLAEKLRELIKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+   +AE ++  AAR+  V+ VI+PAL EGK ++ DR   SS AYQG         + 
Sbjct: 60  GDKVTDKAELLMLYAARVQLVDTVIKPALAEGKWVIGDRHDLSSQAYQGGGREIDRQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+++ +    P  T+ LDLP ++GL+R ++R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRDLVLGGFKPALTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A    +    +D++ + + V  +I   +   + K
Sbjct: 174 ELAAAD-ESILTIDASQNIEQVQADIRKTLLAWLAK 208


>gi|293605096|ref|ZP_06687488.1| dTMP kinase [Achromobacter piechaudii ATCC 43553]
 gi|292816499|gb|EFF75588.1| dTMP kinase [Achromobacter piechaudii ATCC 43553]
          Length = 207

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 10/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+ EG++GAGK+TH   +  FL+    +V  TREPGGTP  E  R ++L    D+
Sbjct: 3   SRGRFITLEGVDGAGKSTHTDWIADFLRSNGREVVSTREPGGTPLGEKLRALVL---TDQ 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G + E ++  AAR +HV  VI PAL  G  ++CDR+ D++YAYQG         +  L+
Sbjct: 60  MGLDTETLLMFAARCEHVRQVIEPALARGAWVVCDRYTDATYAYQGGGRELGAERVAVLE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD T + D+P+++   R+       ++   D FER+     E+ R  +   A
Sbjct: 120 RWMHAG-QPDRTWLFDVPLEVARARLA------DAREPDRFEREGAAFFERTRTAYHARA 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  P R HI+DS  S   + T +   +  L+  
Sbjct: 173 KADPGRIHIIDSTQSIAQIRTELEAGLRALLAD 205


>gi|329925532|ref|ZP_08280406.1| dTMP kinase [Paenibacillus sp. HGF5]
 gi|328939815|gb|EGG36155.1| dTMP kinase [Paenibacillus sp. HGF5]
          Length = 234

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%)

Query: 1   MNSG--------LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           M +G        LFI+ EG +G+GKTT +  L  F+Q  +    +TREPGG   AE  R 
Sbjct: 15  MKAGYAMNNRRPLFITVEGGDGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRS 74

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           ++L        A  EA+++AAAR  H+   + PAL +G  +LCDRF+DSS  YQG     
Sbjct: 75  IILDPEHTSMDARTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGL 134

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               + S+ + ++   MPD T++ D+   IGL R+            +  + +++  HEK
Sbjct: 135 GMEEVWSINQFAIDTRMPDLTLLFDIEPRIGLSRIAANAE----REWNRLDMENLTFHEK 190

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R+ +L +A   PDR  IVD++ +   V   +   + + + K
Sbjct: 191 VREGYLLVAERNPDRIRIVDASKTPAQVEREMNRHLEDAILK 232


>gi|119509052|ref|ZP_01628203.1| Thymidylate kinase [Nodularia spumigena CCY9414]
 gi|119466218|gb|EAW47104.1| Thymidylate kinase [Nodularia spumigena CCY9414]
          Length = 207

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 8/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61
           +G FI FEG+EG GKT+ + L  ++LQ     V VTREPGGT      R +LL       
Sbjct: 2   AGKFIVFEGVEGCGKTSQMQLCCQWLQNLGISVVVTREPGGTELGLHLRRLLLEKVENQP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E +++AA R  HVE  ++P L  GK +LCDR+ DS+ AYQG   +     ++ L 
Sbjct: 62  IAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTTAYQGYGRALNMSLINQLN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+   +  D TI LD+ V++GL R Q           D  E++ +  H + +Q + ++A
Sbjct: 122 YIATAGLESDLTIWLDVDVEVGLARKQ-------GDKFDRIEQETIDFHRRVQQGYSELA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            + P R   VD + S  +V   I  I+ E ++
Sbjct: 175 ASYPSRIIRVDGSLSQAAVQEIIQEILREKLE 206


>gi|194289604|ref|YP_002005511.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424]
 gi|254808286|sp|B3R181|KTHY_CUPTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|193223439|emb|CAQ69444.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424]
          Length = 203

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 11/208 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G FI+FEGI+GAGK+THI  +   L+ +     V  TREPGGT   E  R +LL     
Sbjct: 2   RGKFITFEGIDGAGKSTHIDWVADRLRARADIAGVVTTREPGGTSLGEDLRQILLH---R 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E EA++  AAR +H+  VI PAL  GK ++ DRF D+++AYQG         L+ L
Sbjct: 59  KMHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +      + PD T++ D+P++    R+        +   D FE +     ++ R  +L  
Sbjct: 119 ENWVQGSLQPDLTLLFDVPLETASARLAA------ARTPDKFEAESRAFFQRTRDEYLRR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R  ++D+  S   +   +  I+
Sbjct: 173 AAQSPHRFRVIDATRSIADIRDELEKIL 200


>gi|217077269|ref|YP_002334987.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
 gi|226732664|sp|B7IHT2|KTHY_THEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|217037124|gb|ACJ75646.1| tmk thymidylate kinase [Thermosipho africanus TCF52B]
          Length = 201

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 9/209 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T ++LL ++L+ K   V   REPGGT   E  R +LL   ++    
Sbjct: 1   MFIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIREILLDNNLN-INK 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE VI+P L  G  +L DRF DSS AYQG   +     + +L + +
Sbjct: 60  RSELLLFLASRAQLVEEVIKPHLKRGFFVLADRFSDSSIAYQGGARNIGVETVSTLNDFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD    +D+P  I ++R++++        LD  E++  +  EK R  +L +++ +
Sbjct: 120 TDNIYPDIVFYIDIPTKIAMERLKDKN-------LDRLEKEGQIFLEKVRNTYLKLSKLR 172

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            D   I+D   S  +V   I +IV + +Q
Sbjct: 173 -DNFFIIDGTKSIDNVFAEIKSIVEKHLQ 200


>gi|228989239|ref|ZP_04149232.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442]
 gi|228995422|ref|ZP_04155092.1| Thymidylate kinase [Bacillus mycoides Rock3-17]
 gi|229003036|ref|ZP_04160893.1| Thymidylate kinase [Bacillus mycoides Rock1-4]
 gi|228758194|gb|EEM07382.1| Thymidylate kinase [Bacillus mycoides Rock1-4]
 gi|228764283|gb|EEM13160.1| Thymidylate kinase [Bacillus mycoides Rock3-17]
 gi|228770449|gb|EEM19020.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442]
          Length = 208

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GK+T I+ L  + ++K   V  TREPGG   +E  R +L +      
Sbjct: 2   KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIRAILHNQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEKNYLVLCDRFIDSSLAYQGYARGLGIDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP+ TI LD+  + GL R++       +  ++  + + +  H+  R  +L +  
Sbjct: 122 FATEDCMPNLTIYLDIEPEAGLARIEK----DANREVNRLDMESIEFHKCVRDGYLQVVD 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFLDRIVVVNADQPIEKIVEEVIQLIEDKL 207


>gi|222093800|ref|YP_002527849.1| thymidylate kinase [Bacillus cereus Q1]
 gi|254808278|sp|B9IZB3|KTHY_BACCQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|221237847|gb|ACM10557.1| thymidylate kinase [Bacillus cereus Q1]
          Length = 208

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNKDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|77165137|ref|YP_343662.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707]
 gi|76883451|gb|ABA58132.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707]
          Length = 206

 Score =  241 bits (615), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EGIEGAGK+T +  +++ LQ    +V VTREPGGT   E  R +LLS  ++   A+ E 
Sbjct: 2   LEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLEGMSADTEL 61

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           ++  AAR++HV+ VI PAL  GK +LCDRF  +SYAYQG         +  L+  ++  +
Sbjct: 62  LLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKLESWALNCL 121

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD  ++ D+PV +GL+R   R        LD FE++ +   ++ R I+L +A+  PD+ 
Sbjct: 122 RPDLILLFDVPVRLGLQRATTRCQ-----QLDRFEQEKIDFFDRARTIYLSLAKKYPDQY 176

Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214
            ++DS+     V   I  ++   +++
Sbjct: 177 RLIDSSLPLTRVQEAIQKVIMAFLEE 202


>gi|30260220|ref|NP_842597.1| thymidylate kinase [Bacillus anthracis str. Ames]
 gi|47525283|ref|YP_016632.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183064|ref|YP_026316.1| thymidylate kinase [Bacillus anthracis str. Sterne]
 gi|49480017|ref|YP_034384.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|52145185|ref|YP_081643.1| thymidylate kinase [Bacillus cereus E33L]
 gi|65317490|ref|ZP_00390449.1| COG0125: Thymidylate kinase [Bacillus anthracis str. A2012]
 gi|165872581|ref|ZP_02217213.1| thymidylate kinase [Bacillus anthracis str. A0488]
 gi|167635117|ref|ZP_02393434.1| thymidylate kinase [Bacillus anthracis str. A0442]
 gi|167641523|ref|ZP_02399771.1| thymidylate kinase [Bacillus anthracis str. A0193]
 gi|170688929|ref|ZP_02880131.1| thymidylate kinase [Bacillus anthracis str. A0465]
 gi|170707594|ref|ZP_02898047.1| thymidylate kinase [Bacillus anthracis str. A0389]
 gi|177655343|ref|ZP_02936872.1| thymidylate kinase [Bacillus anthracis str. A0174]
 gi|190568957|ref|ZP_03021858.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I]
 gi|196036358|ref|ZP_03103755.1| thymidylate kinase [Bacillus cereus W]
 gi|196041790|ref|ZP_03109080.1| dTMP kinase [Bacillus cereus NVH0597-99]
 gi|218901231|ref|YP_002449065.1| thymidylate kinase [Bacillus cereus AH820]
 gi|227812703|ref|YP_002812712.1| thymidylate kinase [Bacillus anthracis str. CDC 684]
 gi|228912770|ref|ZP_04076418.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228925284|ref|ZP_04088381.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228931533|ref|ZP_04094440.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228943837|ref|ZP_04106223.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229089163|ref|ZP_04220445.1| Thymidylate kinase [Bacillus cereus Rock3-42]
 gi|229119693|ref|ZP_04248955.1| Thymidylate kinase [Bacillus cereus 95/8201]
 gi|229603011|ref|YP_002864681.1| dTMP kinase [Bacillus anthracis str. A0248]
 gi|254682343|ref|ZP_05146204.1| thymidylate kinase [Bacillus anthracis str. CNEVA-9066]
 gi|254724171|ref|ZP_05185956.1| thymidylate kinase [Bacillus anthracis str. A1055]
 gi|254733566|ref|ZP_05191287.1| thymidylate kinase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254744666|ref|ZP_05202345.1| thymidylate kinase [Bacillus anthracis str. Kruger B]
 gi|254756371|ref|ZP_05208400.1| thymidylate kinase [Bacillus anthracis str. Vollum]
 gi|254762427|ref|ZP_05214269.1| thymidylate kinase [Bacillus anthracis str. Australia 94]
 gi|300119126|ref|ZP_07056827.1| thymidylate kinase [Bacillus cereus SJ1]
 gi|46576505|sp|Q81W11|KTHY_BACAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59798175|sp|Q63HH8|KTHY_BACCZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59798283|sp|Q6HPY6|KTHY_BACHK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808275|sp|C3P9H5|KTHY_BACAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808276|sp|C3LJ02|KTHY_BACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|30253541|gb|AAP24083.1| dTMP kinase [Bacillus anthracis str. Ames]
 gi|47500431|gb|AAT29107.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49176991|gb|AAT52367.1| thymidylate kinase [Bacillus anthracis str. Sterne]
 gi|49331573|gb|AAT62219.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|51978654|gb|AAU20204.1| thymidylate kinase [Bacillus cereus E33L]
 gi|164711709|gb|EDR17254.1| thymidylate kinase [Bacillus anthracis str. A0488]
 gi|167510508|gb|EDR85906.1| thymidylate kinase [Bacillus anthracis str. A0193]
 gi|167529591|gb|EDR92341.1| thymidylate kinase [Bacillus anthracis str. A0442]
 gi|170127590|gb|EDS96464.1| thymidylate kinase [Bacillus anthracis str. A0389]
 gi|170667153|gb|EDT17914.1| thymidylate kinase [Bacillus anthracis str. A0465]
 gi|172080184|gb|EDT65277.1| thymidylate kinase [Bacillus anthracis str. A0174]
 gi|190559881|gb|EDV13865.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I]
 gi|195990988|gb|EDX54959.1| thymidylate kinase [Bacillus cereus W]
 gi|196027410|gb|EDX66027.1| dTMP kinase [Bacillus cereus NVH0597-99]
 gi|218540056|gb|ACK92454.1| thymidylate kinase [Bacillus cereus AH820]
 gi|227003623|gb|ACP13366.1| dTMP kinase [Bacillus anthracis str. CDC 684]
 gi|228663718|gb|EEL19296.1| Thymidylate kinase [Bacillus cereus 95/8201]
 gi|228694126|gb|EEL47807.1| Thymidylate kinase [Bacillus cereus Rock3-42]
 gi|228815794|gb|EEM62029.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228828085|gb|EEM73812.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228834331|gb|EEM79871.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228846830|gb|EEM91834.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|229267419|gb|ACQ49056.1| dTMP kinase [Bacillus anthracis str. A0248]
 gi|298723448|gb|EFI64189.1| thymidylate kinase [Bacillus cereus SJ1]
          Length = 208

 Score =  241 bits (615), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|229170881|ref|ZP_04298484.1| Thymidylate kinase [Bacillus cereus MM3]
 gi|228612547|gb|EEK69766.1| Thymidylate kinase [Bacillus cereus MM3]
          Length = 208

 Score =  241 bits (615), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   NGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  +IGL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|145640425|ref|ZP_01796009.1| thymidylate kinase [Haemophilus influenzae R3021]
 gi|145275011|gb|EDK14873.1| thymidylate kinase [Haemophilus influenzae 22.4-21]
          Length = 210

 Score =  241 bits (615), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAVKNW 204


>gi|229107717|ref|ZP_04237354.1| Thymidylate kinase [Bacillus cereus Rock1-15]
 gi|228675690|gb|EEL30897.1| Thymidylate kinase [Bacillus cereus Rock1-15]
          Length = 208

 Score =  241 bits (615), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R++          ++  + +D+  H+  R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKSVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|46908871|ref|YP_015260.1| thymidylate kinase [Listeria monocytogenes str. 4b F2365]
 gi|47092313|ref|ZP_00230104.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858]
 gi|47095500|ref|ZP_00233109.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854]
 gi|224499368|ref|ZP_03667717.1| thymidylate kinase [Listeria monocytogenes Finland 1988]
 gi|226225244|ref|YP_002759351.1| thymidylate kinase [Listeria monocytogenes Clip81459]
 gi|254824945|ref|ZP_05229946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194]
 gi|254830871|ref|ZP_05235526.1| thymidylate kinase [Listeria monocytogenes 10403S]
 gi|254852005|ref|ZP_05241353.1| thymidylate kinase [Listeria monocytogenes FSL R2-503]
 gi|254899850|ref|ZP_05259774.1| thymidylate kinase [Listeria monocytogenes J0161]
 gi|254912944|ref|ZP_05262956.1| thymidylate kinase [Listeria monocytogenes J2818]
 gi|254931036|ref|ZP_05264395.1| thymidylate kinase [Listeria monocytogenes HPB2262]
 gi|254937325|ref|ZP_05269022.1| thymidylate kinase [Listeria monocytogenes F6900]
 gi|254991884|ref|ZP_05274074.1| thymidylate kinase [Listeria monocytogenes FSL J2-064]
 gi|255025775|ref|ZP_05297761.1| thymidylate kinase [Listeria monocytogenes FSL J2-003]
 gi|255519688|ref|ZP_05386925.1| thymidylate kinase [Listeria monocytogenes FSL J1-175]
 gi|300763550|ref|ZP_07073548.1| thymidylate kinase [Listeria monocytogenes FSL N1-017]
 gi|59798313|sp|Q71W79|KTHY_LISMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|259494275|sp|C1KZP7|KTHY_LISMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46882144|gb|AAT05437.1| thymidylate kinase [Listeria monocytogenes serotype 4b str. F2365]
 gi|47016110|gb|EAL07034.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854]
 gi|47019292|gb|EAL10034.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858]
 gi|225877706|emb|CAS06420.1| Putative thymidylate kinase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|258605303|gb|EEW17911.1| thymidylate kinase [Listeria monocytogenes FSL R2-503]
 gi|258609931|gb|EEW22539.1| thymidylate kinase [Listeria monocytogenes F6900]
 gi|293582582|gb|EFF94614.1| thymidylate kinase [Listeria monocytogenes HPB2262]
 gi|293590945|gb|EFF99279.1| thymidylate kinase [Listeria monocytogenes J2818]
 gi|293594185|gb|EFG01946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194]
 gi|300515827|gb|EFK42876.1| thymidylate kinase [Listeria monocytogenes FSL N1-017]
 gi|328468175|gb|EGF39181.1| thymidylate kinase [Listeria monocytogenes 1816]
 gi|328469553|gb|EGF40494.1| thymidylate kinase [Listeria monocytogenes 220]
          Length = 208

 Score =  241 bits (615), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  +
Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   VD+  + + +   IL  +   +
Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207


>gi|146277283|ref|YP_001167442.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17025]
 gi|145555524|gb|ABP70137.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17025]
          Length = 217

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 1/211 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++ EGI+G+GK+  +  L   L+    +V VTREPGGTP  EA R ++L+   + 
Sbjct: 4   QGGLFLAVEGIDGSGKSGIVQHLAARLRAHGREVVVTREPGGTPEGEAIRGLVLAGADEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   AE ++  AAR+ HV  VI PAL  G ++L DR+  S+ AYQG        F+ +L 
Sbjct: 64  WDPMAELLLMTAARVQHVRRVIAPALEAGSVVLSDRYAGSTLAYQGTGRGLSESFIRALH 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +  ++ PD T+ILDL    GL R + R +         FE  D+  HE+ RQ F   A
Sbjct: 124 AEATGDLWPDLTLILDLDAATGLARSRRRLTGSAIDEG-RFESLDLAFHERIRQSFRAQA 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P R  ++D++ + + V    L  +  ++
Sbjct: 183 ARDPARHAVIDASGTPEQVQARALAALEPVL 213


>gi|262375534|ref|ZP_06068767.1| thymidylate kinase [Acinetobacter lwoffii SH145]
 gi|262309788|gb|EEY90918.1| thymidylate kinase [Acinetobacter lwoffii SH145]
          Length = 199

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 110/206 (53%), Gaps = 8/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
           +FISFEG EG GKTT I  +      +  DV +TREPGGTP AE  R +LL+   +E   
Sbjct: 1   MFISFEGTEGVGKTTLIRSIYEDFIAQGKDVILTREPGGTPMAEQIRSLLLAVNHEEAMA 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR  H+  VI PAL  GKI+LCDRF D+S+AYQ          L  L + 
Sbjct: 61  HDTELLLMYAARAQHLAQVILPALEAGKIVLCDRFSDASFAYQCAGRGLSETKLQLLNDH 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V   MPD T  L+ P+++G+ R + R        LD FE++ V   EK R  +  + + 
Sbjct: 121 FV-ARMPDITFWLEAPIELGMNRARER------GALDRFEQEKVTFFEKVRAGYETLWQR 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
            P+R   +D+  + + V    L+ + 
Sbjct: 174 HPERIKRLDATQTPEQVFEQALSYLK 199


>gi|91977186|ref|YP_569845.1| thymidylate kinase [Rhodopseudomonas palustris BisB5]
 gi|91683642|gb|ABE39944.1| thymidylate kinase [Rhodopseudomonas palustris BisB5]
          Length = 252

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 5/213 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G FI+FEG EG+GK+T I LL + L+  N    VTREPGG+P AE  RH+LL+    
Sbjct: 11  MH-GRFITFEGGEGSGKSTQIKLLAKRLEGANLRTLVTREPGGSPGAEIVRHLLLAGVGR 69

Query: 61  EFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             G AEAEA++FAAAR DHV  +I+PAL  G  +LCDRF DS+  YQG         L++
Sbjct: 70  LIGGAEAEALLFAAARDDHVRTLIQPALESGVWVLCDRFFDSTRVYQGRLGEVSPAMLNA 129

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++++  + PD T+ILD+PV+IGL R   R   R S   D FE + +  H + R  +  
Sbjct: 130 LQDVTIGAMKPDLTVILDVPVEIGLARAAVR---RGSEAPDRFESESIDFHRRLRDAYRQ 186

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           IA  +P+RC ++D+      VA  I   V E +
Sbjct: 187 IAAAEPERCVVIDANAEPHVVAARIWLTVQERL 219


>gi|238020860|ref|ZP_04601286.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147]
 gi|237867840|gb|EEP68846.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147]
          Length = 210

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 111/204 (54%), Gaps = 7/204 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ +GI+GAGKTT +++++ +   +   V  TREPGGTP  EA R +LL+    +   
Sbjct: 4   KFITLDGIDGAGKTTQLNVIRDWFAAQALPVLFTREPGGTPLGEALRALLLNPAT-QVSL 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++  AAR  H+E+VI PAL  G  ++ DRF D+++AYQG         ++ L+   
Sbjct: 63  HTETLLMFAARRQHLEDVILPALARGVSVVSDRFTDATFAYQGGGRGLPDGQIEILENWV 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD TI+LD+P+ + L+R++       S   D FE+++     + R+ +L  A   
Sbjct: 123 QGSLKPDLTILLDVPLAVSLQRIE------RSREKDRFEQEEADFFTRVREAYLRRAAAA 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           P+R  +VDS      V   I  ++
Sbjct: 177 PERYAVVDSNRDKAVVRGEIEGVL 200


>gi|159043474|ref|YP_001532268.1| dTMP kinase [Dinoroseobacter shibae DFL 12]
 gi|254808289|sp|A8LRW0|KTHY_DINSH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157911234|gb|ABV92667.1| dTMP kinase [Dinoroseobacter shibae DFL 12]
          Length = 207

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 76/205 (37%), Positives = 110/205 (53%), Gaps = 6/205 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ISFEGI+G+GK+T    L   L+    D  +TREPGG+P AE  R +L+    D + 
Sbjct: 5   GRLISFEGIDGSGKSTQARRLAEHLRDTGRDPLLTREPGGSPGAEDIRRLLVEGDPDRWS 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E ++F AAR DH+E +I+PAL EG+ ++ DRF DS+  YQG         +D L  +
Sbjct: 65  PETELLLFTAARRDHLERLIQPALAEGRDVITDRFADSTRVYQGATRGDLRALVDQLHSL 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T ++D+P ++ L R   R S       D FE   +      R  FLD+AR 
Sbjct: 125 MI-GREPDLTFVIDMPPELALTRGLARAS-----GEDRFEEFGLPFQTALRAGFLDLARA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
            PDRC ++D       VA +++  +
Sbjct: 179 NPDRCVVIDGNRPEAEVAADVIAHL 203


>gi|171741466|ref|ZP_02917273.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC
           27678]
 gi|171277080|gb|EDT44741.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC
           27678]
          Length = 245

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 27/221 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56
            G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL       
Sbjct: 4   QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 63

Query: 57  -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                            +     EA++FAA R  HV  VIRPAL  G +++ DR+LDSS 
Sbjct: 64  AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 123

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           AYQ          +  L   +   ++P+ T +LD+       R+++          D  E
Sbjct: 124 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 175

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
                   + R  FL++AR +P+R  ++D++ S + V   I
Sbjct: 176 SAGDDFQNRTRNAFLELARAEPERFRVIDASQSIEEVWQRI 216


>gi|260582278|ref|ZP_05850071.1| thymidylate kinase [Haemophilus influenzae NT127]
 gi|260094646|gb|EEW78541.1| thymidylate kinase [Haemophilus influenzae NT127]
          Length = 219

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + + L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I   V   
Sbjct: 185 KDNP-KAVMINAEQSIELVQADIERAVKNW 213


>gi|257069727|ref|YP_003155982.1| thymidylate kinase [Brachybacterium faecium DSM 4810]
 gi|256560545|gb|ACU86392.1| thymidylate kinase [Brachybacterium faecium DSM 4810]
          Length = 243

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 13/215 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYD--VHVTREPGGTPAAEAARHVLLSC 57
             G+FISFEG +GAGK+T + LL   L  +R   +  +  TREPGGT   E+ R +LL  
Sbjct: 19  RRGVFISFEGGDGAGKSTQMQLLHDHLVTERSVAEDLILTTREPGGTALGESIRELLLHG 78

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             ++    AEA+++AA R  HV  V+RP L  G ++L DR+LDSS AYQG         +
Sbjct: 79  --EDVDVRAEALLYAADRAHHVSTVVRPHLARGGLVLGDRYLDSSVAYQGAGRELDAEEI 136

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +L   +V  ++P  TI+LD+P     +R       R SA  D  E   +  HE  R+ F
Sbjct: 137 TTLSLWAVDGLLPHRTILLDVPPQTLDER-------RGSAGRDRLESAGLEFHEAVRREF 189

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           LD+A+  P+R  ++D     + V   +L  V E++
Sbjct: 190 LDLAQADPERYAVIDGTLPPEEVHDQVLAAVGEVL 224


>gi|251789239|ref|YP_003003960.1| thymidylate kinase [Dickeya zeae Ech1591]
 gi|247537860|gb|ACT06481.1| thymidylate kinase [Dickeya zeae Ech1591]
          Length = 215

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58
           MN+  FI  EG+EGAGKT+  +++   L+    +DV  TREPGGTP AE  R ++     
Sbjct: 1   MNNSKFIVIEGLEGAGKTSAHAVVVETLRSFGIHDVVFTREPGGTPLAEKLRTLIKQGVA 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVIRPAL  G  ++ DR   SS AYQG         + 
Sbjct: 61  GETLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDPHLMT 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LD+P ++GLKR + R        LD  E++ +   E+ R  + 
Sbjct: 121 SLRDTVLGDFRPDLTLYLDIPPELGLKRARQR------GELDRIEQESLAFFERTRARYQ 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A         +D++     V  +I   + + +Q++
Sbjct: 175 QLAAADAA-IVTIDASRELAQVNADIRQALSDWLQRQ 210


>gi|307701598|ref|ZP_07638615.1| dTMP kinase [Mobiluncus mulieris FB024-16]
 gi|307613277|gb|EFN92529.1| dTMP kinase [Mobiluncus mulieris FB024-16]
          Length = 238

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60
             G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G   
Sbjct: 21  TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 80

Query: 61  ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+        
Sbjct: 81  VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 140

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L   +   + P+ T++LDL  +I  +R   + +       D  E + +    K R  
Sbjct: 141 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMESEGLEFQRKVRAR 197

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  +A    +   +VD++ + + +A  +   +  ++
Sbjct: 198 FRRLAEEN-ETWMVVDASLAPEEIAAQVRLRLASVL 232


>gi|297207416|ref|ZP_06923855.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910375|ref|ZP_07127828.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296887979|gb|EFH26873.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300888364|gb|EFK83551.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 208

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN    FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    
Sbjct: 1   MNKMSAFITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +
Sbjct: 58  NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E ++  + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +
Sbjct: 118 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I  N+  R   V++    ++V  +    + + ++K
Sbjct: 173 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 207


>gi|118475802|ref|YP_892953.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam]
 gi|196047361|ref|ZP_03114574.1| thymidylate kinase [Bacillus cereus 03BB108]
 gi|225862082|ref|YP_002747460.1| thymidylate kinase [Bacillus cereus 03BB102]
 gi|229182425|ref|ZP_04309677.1| Thymidylate kinase [Bacillus cereus BGSC 6E1]
 gi|166221719|sp|A0R8A3|KTHY_BACAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808277|sp|C1ES32|KTHY_BACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118415027|gb|ABK83446.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam]
 gi|196021763|gb|EDX60457.1| thymidylate kinase [Bacillus cereus 03BB108]
 gi|225787947|gb|ACO28164.1| dTMP kinase [Bacillus cereus 03BB102]
 gi|228601005|gb|EEK58573.1| Thymidylate kinase [Bacillus cereus BGSC 6E1]
          Length = 208

 Score =  240 bits (614), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL +  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNDDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|281413072|ref|YP_003347151.1| thymidylate kinase [Thermotoga naphthophila RKU-10]
 gi|281374175|gb|ADA67737.1| thymidylate kinase [Thermotoga naphthophila RKU-10]
          Length = 197

 Score =  240 bits (614), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 15/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL R+L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R   V   I+  L EG ++L DR+ DSS AYQG   +     ++ L + +
Sbjct: 58  KAELFLFLASRNLLVME-IKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  L R            L+ FE++     E+ R+ +L +A+  
Sbjct: 117 TDGLVPDLTFYIDVDVETALNR---------KGELNRFEKR--EFLERVREGYLVLAKEH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P+R  ++D   S + +  +++  V  
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVER 191


>gi|312115143|ref|YP_004012739.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220272|gb|ADP71640.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100]
          Length = 249

 Score =  240 bits (614), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 93/247 (37%), Positives = 126/247 (51%), Gaps = 36/247 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG EGAGKTT   +L   L+RK  +V +TREPGGTP AEA R VLLS     F
Sbjct: 2   RGRFITLEGGEGAGKTTQAKVLAERLRRKGINVLLTREPGGTPRAEAIREVLLSGKAKRF 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA  EA++F AAR  H+E  IRPAL  G  ++CDRF DS+ AYQG         ++++ +
Sbjct: 62  GALGEAVLFYAARESHLELGIRPALERGTWVICDRFSDSTRAYQGAAGGLPLSVIETIDK 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS------------------------------ 152
             V +  PD T+I DLP ++GLKR   R                                
Sbjct: 122 AVVGDTRPDLTLIFDLPPELGLKRAAERLRGGVVSAAVGGERAEPAAAAGGSPGAAAGSD 181

Query: 153 ------LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
                 L ++   D FE  ++  H   R  FL IA+ +PDRC +VD++ +   V   + +
Sbjct: 182 VIAPAPLVDAPASDRFETMNLTFHRSLRAEFLAIAKAEPDRCAVVDASDTPNRVEDKVWS 241

Query: 207 IVWELVQ 213
           IV +  Q
Sbjct: 242 IVRDRFQ 248


>gi|206900865|ref|YP_002250503.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12]
 gi|206739968|gb|ACI19026.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12]
          Length = 205

 Score =  240 bits (614), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 11/210 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + LFI+FEGI+G+GKTT   LLK +L+ K + V++TREPGGT      R +LLS    
Sbjct: 1   MKNSLFITFEGIDGSGKTTQAILLKDYLESKGFKVYLTREPGGTEVGSKIREILLSPDFS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E  ++ A+R+++   V++  L E  I++C+R+ DS+ AYQG   +     L  +
Sbjct: 61  -INPWTEVFLYLASRVENTI-VVKKKLEENYIVICERYADSTIAYQGYGRNLPLNILAEM 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+   + PD T+++DL  ++ L+R +           D  E +    + + R+ +L+I
Sbjct: 119 NDIATSGLKPDLTVLIDLDPELALRRKK---------TFDRIEMEGKDFYYRVREGYLEI 169

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+ + +R  I+  + S + +   I+  + E
Sbjct: 170 AKREQERFIIIPGSLSKEEIFERIVKRIKE 199


>gi|254439317|ref|ZP_05052811.1| thymidylate kinase [Octadecabacter antarcticus 307]
 gi|198254763|gb|EDY79077.1| thymidylate kinase [Octadecabacter antarcticus 307]
          Length = 223

 Score =  240 bits (614), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 84/209 (40%), Positives = 113/209 (54%), Gaps = 10/209 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEGI+G+GK+T   LLK        D  +TREPGG+  AE  R +LL+   D + 
Sbjct: 22  GLFISFEGIDGSGKSTQTKLLKDRFP----DAVLTREPGGSAGAEEIRALLLTGDPDRWS 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  GK ++CDRF DS+  YQG    +    +D+L ++
Sbjct: 78  AETEILLFTAARRDHLEKTILPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHDV 137

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T I+D+   I L R   R S       D FE   +   E  R  FL +A+ 
Sbjct: 138 MIGR-EPDLTFIIDMDPGIALSRGLARGS-----GEDRFEDMGLAFQETLRHGFLALAKA 191

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            PDRC ++D      +VA  I   V + V
Sbjct: 192 NPDRCVLIDGNRDPVAVAAEIAVHVTDRV 220


>gi|329769793|ref|ZP_08261194.1| thymidylate kinase [Gemella sanguinis M325]
 gi|328838155|gb|EGF87773.1| thymidylate kinase [Gemella sanguinis M325]
          Length = 208

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 7/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG +G+GKTT I+ L ++L+ K Y V  TREPGGT  +E  R +L      E 
Sbjct: 2   RGKFITVEGSDGSGKTTFINFLTQYLKDKGYKVITTREPGGTEFSEKVRELLFD-KTYEI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E+++F  +R DH+   I P + +G I++CDRF+DSS AYQ          +  + +
Sbjct: 61  DAKTESLLFCVSRRDHIIKKIIPYVEDGYIVICDRFVDSSIAYQSYGRGLSKQDIIDINK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+   + V++GL R + R         +  + +D+  ++  +  + +++ 
Sbjct: 121 YATDGLEPDLTLYFKVDVEVGLSRTKGRDEN------NRMDHEDLSFYKSVKHGYDELSE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              +R  +VD+   +++V  + L IV   ++  +
Sbjct: 175 EYSNRIKVVDANQKYENVEKDALEIVEGFLKNEL 208


>gi|119025180|ref|YP_909025.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703]
 gi|154486549|ref|ZP_02027956.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis
           L2-32]
 gi|166221721|sp|A0ZZR0|KTHY_BIFAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118764764|dbj|BAF38943.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703]
 gi|154084412|gb|EDN83457.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis
           L2-32]
          Length = 217

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 15/211 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----- 57
            G FISFEG++G GKTT +  L+ +++ +  +  VTREPGGT    A R +LL       
Sbjct: 2   QGTFISFEGVDGVGKTTQVERLRAYVESQGRECVVTREPGGTALGVAIRKMLLHGVDTGD 61

Query: 58  --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +     EA++FAA R  HV  VI PAL  G +++ DR+LDSS AYQ         
Sbjct: 62  ENDCADIAPRTEALLFAADRAQHVAEVILPALQRGAVVITDRYLDSSLAYQAGGRELTAA 121

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + +L   +   ++P+ T +LD+       R+Q+          D  E        + R 
Sbjct: 122 EIRNLSMWATNGLLPERTYLLDMDPAQSHARLQH--------AEDRMEAAGNDFQRRTRV 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
            FLD+A  +P+R H++D++ S + V   I  
Sbjct: 174 AFLDLAEREPERFHVIDASQSIEDVWARIKA 204


>gi|33592905|ref|NP_880549.1| thymidylate kinase [Bordetella pertussis Tohama I]
 gi|33596203|ref|NP_883846.1| thymidylate kinase [Bordetella parapertussis 12822]
 gi|33601614|ref|NP_889174.1| thymidylate kinase [Bordetella bronchiseptica RB50]
 gi|46576478|sp|Q7VXD2|KTHY_BORPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576488|sp|Q7WA31|KTHY_BORPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576494|sp|Q7WJ63|KTHY_BORBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33572553|emb|CAE42133.1| thymidylate kinase [Bordetella pertussis Tohama I]
 gi|33573206|emb|CAE36861.1| thymidylate kinase [Bordetella parapertussis]
 gi|33576051|emb|CAE33130.1| thymidylate kinase [Bordetella bronchiseptica RB50]
          Length = 208

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG++GAGK+TH + + + L+     V  TREPGGTP  E  R +LLS   +  
Sbjct: 4   RGRFITLEGVDGAGKSTHTAWMVQALRDLGLTVLATREPGGTPVGEKLRELLLS---EPM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR +HV  VI PAL  G+ ++CDRF D+SYAYQG         + +L++
Sbjct: 61  ALETETLLMFAARCEHVREVIAPALARGEWVVCDRFTDASYAYQGGGRQLGAARVAALEQ 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               ++ PD T + D+P+D+   R+        S  LD FER++    E+ R  + + AR
Sbjct: 121 WVHPDLQPDRTWLFDVPLDVARARLA------RSRQLDRFEREEDAFFERTRAAYHERAR 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   R  I+DS+   + V   + + V ELV +
Sbjct: 175 SSDGRIRIIDSSRPLEVVRAQLDSEVRELVAQ 206


>gi|217957606|ref|YP_002336148.1| thymidylate kinase [Bacillus cereus AH187]
 gi|228983286|ref|ZP_04143500.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229136875|ref|ZP_04265503.1| Thymidylate kinase [Bacillus cereus BDRD-ST26]
 gi|229153810|ref|ZP_04281941.1| Thymidylate kinase [Bacillus cereus ATCC 4342]
 gi|229194421|ref|ZP_04321225.1| Thymidylate kinase [Bacillus cereus m1293]
 gi|226732653|sp|B7HPU1|KTHY_BACC7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|217067456|gb|ACJ81706.1| thymidylate kinase [Bacillus cereus AH187]
 gi|228589011|gb|EEK47025.1| Thymidylate kinase [Bacillus cereus m1293]
 gi|228629614|gb|EEK86310.1| Thymidylate kinase [Bacillus cereus ATCC 4342]
 gi|228646540|gb|EEL02746.1| Thymidylate kinase [Bacillus cereus BDRD-ST26]
 gi|228776400|gb|EEM24752.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 208

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|254361189|ref|ZP_04977333.1| dTMP kinase [Mannheimia haemolytica PHL213]
 gi|261492947|ref|ZP_05989492.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261495090|ref|ZP_05991556.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153092680|gb|EDN73729.1| dTMP kinase [Mannheimia haemolytica PHL213]
 gi|261309256|gb|EEY10493.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311399|gb|EEY12557.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 206

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 8/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGKTT   ++ + L++    DV +TREPGGTP AE  RH++     + 
Sbjct: 2   RGKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGTPLAEKLRHLIKHETEEA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQG         L++L+
Sbjct: 62  INDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRKLDRHLLETLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LDL   IGL+R + R        LD  E++ +    + R+ +L++ 
Sbjct: 122 ESVLGTFEPDLTIYLDLDPVIGLERARGR------GELDRIEQQSLDFFYRTRERYLELT 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           ++  D+  I+++    + V  +I  ++   ++
Sbjct: 176 QHN-DKAVIINAEQPIEQVTADIQQVIRNWLK 206


>gi|229009541|ref|ZP_04166768.1| Thymidylate kinase [Bacillus mycoides DSM 2048]
 gi|228751685|gb|EEM01484.1| Thymidylate kinase [Bacillus mycoides DSM 2048]
          Length = 208

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKKEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIGK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +R  +V++    + +   ++ I+ + +
Sbjct: 178 RFSNRIVLVNADQPMKKLIEEVVQIIEDKL 207


>gi|319775618|ref|YP_004138106.1| thymidylate kinase [Haemophilus influenzae F3047]
 gi|329122334|ref|ZP_08250922.1| dTMP kinase [Haemophilus aegyptius ATCC 11116]
 gi|317450209|emb|CBY86425.1| thymidylate kinase [Haemophilus influenzae F3047]
 gi|327473895|gb|EGF19312.1| dTMP kinase [Haemophilus aegyptius ATCC 11116]
          Length = 219

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213


>gi|240950250|ref|ZP_04754530.1| thymidylate kinase [Actinobacillus minor NM305]
 gi|257465436|ref|ZP_05629807.1| thymidylate kinase [Actinobacillus minor 202]
 gi|240295251|gb|EER46050.1| thymidylate kinase [Actinobacillus minor NM305]
 gi|257451096|gb|EEV25139.1| thymidylate kinase [Actinobacillus minor 202]
          Length = 209

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 115/212 (54%), Gaps = 8/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGKTT    +   L+    + +  TREPGGTP AE  RH++     + 
Sbjct: 2   RGKFIVLEGLEGAGKTTAHQAILAQLEAAGIHHIVQTREPGGTPLAEKLRHLIKHDLEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PAL EGK +L DR   SS AYQG         L++L+
Sbjct: 62  VNDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQLDRQLLETLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI LD+   IGL+R + R        LD  E++ +    + RQ +L++ 
Sbjct: 122 QTILGDFEPDLTIYLDIDPAIGLERARGR------GELDRIEQQSLDFFYRTRQRYLELT 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +N  D+  I+++    + VA +I   V   ++
Sbjct: 176 QNN-DKAVIINAEQPIEKVAADIQQAVENFLK 206


>gi|68249058|ref|YP_248170.1| thymidylate kinase [Haemophilus influenzae 86-028NP]
 gi|68057257|gb|AAX87510.1| thymidylate kinase [Haemophilus influenzae 86-028NP]
          Length = 219

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + + L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+N+I+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  P +  ++++  S + V  +I   V   
Sbjct: 185 KENP-KAVVINAEQSIELVQADIERAVKNW 213


>gi|329946277|ref|ZP_08293871.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328527569|gb|EGF54564.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 253

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 8/214 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFISFEG +G GKTT I +L   L   + D  +TREPGGT      R +LL  G   
Sbjct: 10  HPGLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTGLGLEIRRLLLHGGY-- 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R  H+   +RPAL  G ++L DR+LDSS AYQG   S     +  L 
Sbjct: 68  VAPRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLS 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + ++PD TI+LD   D+  +R   R         D  E++        R+ FL +A
Sbjct: 128 LWATEGLLPDLTILLDGDPDLAEQRATGR------GAKDRLEQEGGTFRTSLRRQFLALA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +P R  ++D+  S   VA +++    E V++ 
Sbjct: 182 EAEPGRFVVIDADRSVDQVADDVIGAAVEAVRRH 215


>gi|282915799|ref|ZP_06323567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139]
 gi|283768917|ref|ZP_06341826.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19]
 gi|282320290|gb|EFB50632.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139]
 gi|283461098|gb|EFC08184.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19]
          Length = 210

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN    FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    
Sbjct: 3   MNKMSAFITFEGPEGSGKTTVINEVYHRL-AKDYDVIMTREPGGVPTGEEIRKIVLEG-- 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +
Sbjct: 60  NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E ++  + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +
Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I  N+  R   V++    ++V  +    + + ++K
Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|225026353|ref|ZP_03715545.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353]
 gi|224956363|gb|EEG37572.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353]
          Length = 209

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 7/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI  EG +G+GKTT I+LLK +L+   Y+  +TREPGGT   E  R ++L+    E 
Sbjct: 2   KGLFIVMEGPDGSGKTTQINLLKEYLEEAGYECLITREPGGTVIGEEIRQLILNPEHKEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++AA+R   V  VI PAL EGKI++ DRF+DSS  YQG         + ++  
Sbjct: 62  SPVTEMLLYAASRAQLVHEVIGPALEEGKIVISDRFVDSSIVYQGIARKLGISTVSAVNA 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD    +DL    GL+R +      E   LD  E++ +  H    + +  +  
Sbjct: 122 PGIGIYRPDGIFFIDLSEAEGLRRKK------EQKNLDRMEQEGIDFHHMVSEGYRKVLS 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +P+    +D   S  ++   I N V EL++K+
Sbjct: 176 GRPEVMK-IDGGRSIDTIQKKIRNHVDELLKKK 207


>gi|18978102|ref|NP_579459.1| thymidylate kinase [Pyrococcus furiosus DSM 3638]
 gi|23821777|sp|Q8U071|KTHY_PYRFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|18893897|gb|AAL81854.1| thymidylate kinase (tmk) [Pyrococcus furiosus DSM 3638]
          Length = 210

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 15/214 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  GLFI  EGI+G+GKTT   LL R+ +   + V +T+EP  T   +  R ++L     
Sbjct: 1   MKRGLFIVLEGIDGSGKTTQARLLARWFEDNGFKVVLTKEPTDTEFGKIIRKLVLEGSII 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  EAEA++FAA R +HV+ +I PAL EGK+++ DR+  SS AYQ  R     L L
Sbjct: 61  DGGRISLEAEALLFAADRAEHVKKIIEPALREGKVVISDRYFYSSLAYQWARG----LNL 116

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L EI+     PD  I+LD+P   G+KR++ R S  E   L         + EK R+ +
Sbjct: 117 EWLIEINKFAPHPDIAILLDIPPREGIKRIKKRSSQTEFDKL-------FKLQEKVRENY 169

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + +A+   +   I+D+  S + V   I++ + E+
Sbjct: 170 IKLAKMFDE-IKIIDATKSVEEVHREIISSIKEI 202


>gi|51596788|ref|YP_070979.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953]
 gi|153946978|ref|YP_001400560.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758]
 gi|186895859|ref|YP_001872971.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+]
 gi|59798199|sp|Q669L8|KTHY_YERPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166987710|sp|A7FH32|KTHY_YERP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238691421|sp|B2K751|KTHY_YERPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|51590070|emb|CAH21704.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953]
 gi|152958473|gb|ABS45934.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758]
 gi|186698885|gb|ACC89514.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+]
          Length = 212

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + E  PD T+ LDLP  +GL R + R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A +       +D++   + V+ +I   + + +  +
Sbjct: 174 ELAASDAS-IKTIDASQPIEQVSASISQALAQWLTNQ 209


>gi|163938038|ref|YP_001642922.1| thymidylate kinase [Bacillus weihenstephanensis KBAB4]
 gi|229131038|ref|ZP_04259951.1| Thymidylate kinase [Bacillus cereus BDRD-ST196]
 gi|229165020|ref|ZP_04292816.1| Thymidylate kinase [Bacillus cereus AH621]
 gi|229487581|sp|A9VN43|KTHY_BACWK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|163860235|gb|ABY41294.1| dTMP kinase [Bacillus weihenstephanensis KBAB4]
 gi|228618405|gb|EEK75434.1| Thymidylate kinase [Bacillus cereus AH621]
 gi|228652375|gb|EEL08299.1| Thymidylate kinase [Bacillus cereus BDRD-ST196]
          Length = 208

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIGK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +R  +V++    + +   ++ I+ + +
Sbjct: 178 RFSNRIVLVNADQPMKKLIEEVVQIIEDKL 207


>gi|283784887|ref|YP_003364752.1| Thymidylate kinase [Citrobacter rodentium ICC168]
 gi|282948341|emb|CBG87926.1| Thymidylate kinase [Citrobacter rodentium ICC168]
          Length = 213

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 12/221 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   LQ+    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLQQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VIRPAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEIICDKAEVLMFYAARVQLVETVIRPALANGAWVIGDRHDLSTQAYQGGGRGIDRHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +L++A   P     +D+     +V  +I  +V E V+++ +
Sbjct: 174 YLELAAQDPG-IRTIDATQPLDAVMHSIRTVVSEWVKEQGA 213


>gi|297621242|ref|YP_003709379.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044]
 gi|297376543|gb|ADI38373.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044]
          Length = 199

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 9/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63
           +FIS EG EG+GKTT I  L  +L+ K   V +TREPGGT   E+ R VLL       F 
Sbjct: 2   MFISVEGGEGSGKTTLIRNLAEYLESKGDQVLITREPGGTRFGESLRKVLLDPEFPAAFN 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AE ++F AAR+ H+E VI+PAL +GK ++CDRF DS+ AYQG       + ++ L   
Sbjct: 62  ARAEMLLFLAARVQHIEEVIQPALRKGKTVICDRFNDSTIAYQGGGRELGVVRVEQLCFE 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                 PD T +LD+  +   +R+        +   D  E++    H K R  F  +   
Sbjct: 122 VCDGFQPDKTFVLDINPETAFQRL--------NRSKDRMEKESFDFHNKVRSAFYALKDK 173

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
            P+R H++++  S + V  ++L  + 
Sbjct: 174 HPNRIHLINADQSKEKVLADVLKYLQ 199


>gi|84686498|ref|ZP_01014391.1| thymidylate kinase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665411|gb|EAQ11888.1| thymidylate kinase [Rhodobacterales bacterium HTCC2654]
          Length = 207

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 6/196 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+FEGI+G+GK+T   LL   L+ +  DV  TREPGG+P AE  R ++L    D +
Sbjct: 2   TGHFITFEGIDGSGKSTQARLLAEALKAEGRDVVATREPGGSPGAEEIRRLVLEGDPDRW 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E +I P+L  GKI++CDRF DS+  YQG R       +D L  
Sbjct: 62  SAETEILLFTAARRDHLERLIDPSLAAGKIVICDRFADSTRMYQGLRGPGLRKVVDDLHR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T I+D+    G  R + R    E      FE     +  + R+ FL +A+
Sbjct: 122 LMIGR-EPDLTFIIDMDPTTGHARAKGRNGTEE-----RFEDFGADLQVQMREGFLALAK 175

Query: 183 NQPDRCHIVDSAHSFQ 198
            +P RC ++D   + +
Sbjct: 176 AEPGRCVVIDGDGTPE 191


>gi|145630365|ref|ZP_01786146.1| thymidylate kinase [Haemophilus influenzae R3021]
 gi|144984100|gb|EDJ91537.1| thymidylate kinase [Haemophilus influenzae R3021]
          Length = 219

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + + L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRASYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 185 KDNP-KAVMINAEQSIELVQADIESAVKNW 213


>gi|309801867|ref|ZP_07695984.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022]
 gi|308221519|gb|EFO77814.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022]
          Length = 246

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 27/221 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56
            G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL       
Sbjct: 5   QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 64

Query: 57  -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                            +     EA++FAA R  HV  VIRPAL  G +++ DR+LDSS 
Sbjct: 65  AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 124

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           AYQ          +  L   +   ++P+ T +LD+       R+++          D  E
Sbjct: 125 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 176

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
                   + R  FL++AR++P+R  ++D++ S + V   I
Sbjct: 177 SAGDDFQNRTRNAFLELARDEPERFRVIDASQSIEEVWQRI 217


>gi|229074092|ref|ZP_04207139.1| Thymidylate kinase [Bacillus cereus Rock4-18]
 gi|228708986|gb|EEL61112.1| Thymidylate kinase [Bacillus cereus Rock4-18]
          Length = 208

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINL 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  +IGL R++          ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSVTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ I+ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207


>gi|310816869|ref|YP_003964833.1| thymidylate kinase [Ketogulonicigenium vulgare Y25]
 gi|308755604|gb|ADO43533.1| thymidylate kinase [Ketogulonicigenium vulgare Y25]
          Length = 205

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 82/207 (39%), Positives = 118/207 (57%), Gaps = 6/207 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFISFEGI+G+GK+T   +L   L+ + +DV +TREPGG+P AE  R ++L+   D
Sbjct: 1   MTCGLFISFEGIDGSGKSTQARVLADALRGRGHDVVLTREPGGSPGAEEIRRLVLTGATD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  I PAL  G+I++ DRF DS+ AYQG         +D+L
Sbjct: 61  RWSAETETLLFTAARRDHLEKTILPALAAGQIVITDRFADSTRAYQGATRGDLRGIVDAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             + +    PD T ++D      L R   R +         FE   + + +K R ++LDI
Sbjct: 121 HALMIGR-EPDLTFVIDADPAASLTRGLARSTDEL-----RFEEFGLPLQQKMRAVYLDI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
           A  QP RC ++D A +  +VA  IL  
Sbjct: 175 AHAQPQRCIVIDGAGTIDAVAARILTA 201


>gi|284048006|ref|YP_003398345.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731]
 gi|283952227|gb|ADB47030.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731]
          Length = 206

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 8/213 (3%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   GLFI+ EG +G GKTT    L R+ +    +  +TREPGGT  AE+ R ++L   +
Sbjct: 1   MKQKGLFITLEGPDGGGKTTQAQQLARWFRLYGRETVITREPGGTATAESIRELVLDPAL 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    E E ++  AAR DHV+ VIRPAL  GK+++CDRF DS+  YQG         L  
Sbjct: 61  D-LSPETETLLQLAARADHVDQVIRPALEAGKVVICDRFTDSTMVYQGILRDMDLAQLRK 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + + + + PD T++LD      +KR +NR        +D FE + +   ++ R  +L 
Sbjct: 120 LNDFATRGLRPDVTLLLDGDPRELVKRRENR------GTVDKFELQGLAYQDRIRAGYLR 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A+ +P+R  +VD+    + V   I+  +   V
Sbjct: 174 LAQEEPERILVVDALREPEVVTEEIICSLERFV 206


>gi|306823747|ref|ZP_07457121.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679]
 gi|304552745|gb|EFM40658.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679]
          Length = 245

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 27/221 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56
            G+FISFEG++G GKTT +  L+  ++ +  +  VTREPGGT    A R +LL       
Sbjct: 4   QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 63

Query: 57  -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                            +     EA++FAA R  HV  VIRPAL  G +++ DR+LDSS 
Sbjct: 64  AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 123

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           AYQ          +  L   +   ++P+ T +LD+       R+++          D  E
Sbjct: 124 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 175

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
                   + R  FL++AR++P+R  ++D++ S + V   I
Sbjct: 176 SAGDDFQNRTRNAFLELARDEPERFRVIDASQSIEEVWQRI 216


>gi|261866745|ref|YP_003254667.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412077|gb|ACX81448.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 209

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 9/209 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI  EG+EGAGK+T    +   L+     +V  TREPGGTP AE  RH++     +E 
Sbjct: 3   GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRHLIKH-ENEEP 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L SL++
Sbjct: 62  TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+   +GL R + R        LD  E+++     + R  +L++ +
Sbjct: 122 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + P +  I+D+A   + V  +I + V   
Sbjct: 176 DNP-KAVIIDAAQPVEQVRADIQSAVKNW 203


>gi|315644344|ref|ZP_07897484.1| thymidylate kinase [Paenibacillus vortex V453]
 gi|315280221|gb|EFU43513.1| thymidylate kinase [Paenibacillus vortex V453]
          Length = 214

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 6/216 (2%)

Query: 1   MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN    LFI+ EG EG+GKTT +  L  F+Q  +    +TREPGG   AE  R ++L   
Sbjct: 1   MNNRRPLFITLEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRSIILDPE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                A  EA+++AAAR  H+   + PAL +G  +LCDRF+DSS  YQG         + 
Sbjct: 61  HTAMDARTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVW 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           S+ + ++   MPD T++ D+   IGL R+            +  + +++  HEK R+ +L
Sbjct: 121 SINQFAIDTRMPDLTLLFDIEPKIGLSRIAANAE----REWNRLDMENLTFHEKVREGYL 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A   PDR  IVD++ +   V   +   + + + K
Sbjct: 177 LVAERNPDRIRIVDASKTPAQVEREMNRHLEDAILK 212


>gi|123441946|ref|YP_001005929.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|166223129|sp|A1JN89|KTHY_YERE8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122088907|emb|CAL11714.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 212

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + E  PD T+ LDLP  IGL R + R        LD  E++ +   E+ R+ +L
Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A         +D++   + V+ +I  ++ + +  R
Sbjct: 174 ELAATDSS-IKTIDASQPLEQVSESISQVLKQWLTSR 209


>gi|152979524|ref|YP_001345153.1| thymidylate kinase [Actinobacillus succinogenes 130Z]
 gi|254808270|sp|A6VQH1|KTHY_ACTSZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150841247|gb|ABR75218.1| dTMP kinase [Actinobacillus succinogenes 130Z]
          Length = 210

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 8/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGKTT +  +   L+     D+  TREPGGTP AE  R ++     + 
Sbjct: 2   KGKFIVLEGLEGAGKTTALHTVVEQLRSLGITDLVFTREPGGTPLAEKLRQLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PAL  GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALAAGKWVIGDRHDLSSQAYQGGGRGLDRHFMQTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +    PD T+ LD+    GL R + R        LD  E+  +    + R  +L++ 
Sbjct: 122 DSVLGGFEPDFTLYLDIEPAEGLARARGR------GELDRIEQAGLDFFNRTRTRYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           R+ P +  ++++  + + V  +I + V + V+ +
Sbjct: 176 RDNP-KAVVINARQNIERVTADIQSAVKKFVESQ 208


>gi|93004986|ref|YP_579423.1| thymidylate kinase [Psychrobacter cryohalolentis K5]
 gi|92392664|gb|ABE73939.1| thymidylate kinase [Psychrobacter cryohalolentis K5]
          Length = 225

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/216 (35%), Positives = 110/216 (50%), Gaps = 14/216 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FISFEG EG GKTT I  L   LQ    D   TREPGG+P AE  R +LL      
Sbjct: 17  TQGRFISFEGTEGVGKTTAIEQLCARLQAHGIDYLRTREPGGSPFAERLREILLDP-NTA 75

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119
              + E ++  AAR DH++ VI PAL  G  ++CDRF DS+ AYQG   +     + +  
Sbjct: 76  INDDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDAIVRAKI 135

Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              +++  +Q  +P+ T+ LDLPV  G+ R   R      +  D FE++      +  Q 
Sbjct: 136 DMLIEQFVMQ--LPELTLWLDLPVLEGMARANKR------SAADRFEQQATEFFTRVHQG 187

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  +A  QP+R   +D++ S   V+  I   + E +
Sbjct: 188 FSVLASEQPERIQRIDASGSANEVSARIWQTIEEKL 223


>gi|84495036|ref|ZP_00994155.1| thymidylate kinase [Janibacter sp. HTCC2649]
 gi|84384529|gb|EAQ00409.1| thymidylate kinase [Janibacter sp. HTCC2649]
          Length = 210

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLFI+FEG +GAGK+T + LL   L+    +V VTR+PGGTP     R ++L    D
Sbjct: 1   MTQGLFIAFEGGDGAGKSTQVRLLAAALESLGREVVVTRQPGGTPLGAQIRDLVLHG--D 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA++FAA +  HV+ +IRPA+  G +++ DR+ DS+ AYQG         +  L
Sbjct: 59  HVSPRAEALLFAADKAHHVDQLIRPAMDRGSVVITDRYTDSAVAYQGAGRDLGASEVHEL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q  +V  ++PD T+I+D+    G +R             D  E +    H+  R  FL +
Sbjct: 119 QMWAVGSLVPDLTVIVDVTAQEGRRR--------RGEVHDRLESEADAFHDAIRHHFLAM 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           A+  P+R  +VD       +   ++  + 
Sbjct: 171 AQGSPERYLVVDGTTPPDEIHAAVMGRLE 199


>gi|22125658|ref|NP_669081.1| thymidylate kinase [Yersinia pestis KIM 10]
 gi|45442039|ref|NP_993578.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001]
 gi|108807915|ref|YP_651831.1| thymidylate kinase [Yersinia pestis Antiqua]
 gi|108812186|ref|YP_647953.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|145599124|ref|YP_001163200.1| thymidylate kinase [Yersinia pestis Pestoides F]
 gi|149366521|ref|ZP_01888555.1| thymidylate kinase [Yersinia pestis CA88-4125]
 gi|162421207|ref|YP_001607823.1| thymidylate kinase [Yersinia pestis Angola]
 gi|165925614|ref|ZP_02221446.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165940160|ref|ZP_02228692.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008626|ref|ZP_02229524.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166210903|ref|ZP_02236938.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401793|ref|ZP_02307284.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421799|ref|ZP_02313552.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167427086|ref|ZP_02318839.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470268|ref|ZP_02334972.1| thymidylate kinase [Yersinia pestis FV-1]
 gi|218928741|ref|YP_002346616.1| thymidylate kinase [Yersinia pestis CO92]
 gi|229841590|ref|ZP_04461748.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843706|ref|ZP_04463849.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229894450|ref|ZP_04509632.1| thymidylate kinase [Yersinia pestis Pestoides A]
 gi|229902510|ref|ZP_04517629.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|270490312|ref|ZP_06207386.1| dTMP kinase [Yersinia pestis KIM D27]
 gi|294504194|ref|YP_003568256.1| thymidylate kinase [Yersinia pestis Z176003]
 gi|6016463|sp|O69169|KTHY_YERPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123072761|sp|Q1C6N6|KTHY_YERPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123073357|sp|Q1CI27|KTHY_YERPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223130|sp|A4TLR5|KTHY_YERPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687291|sp|A9R3P0|KTHY_YERPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21958570|gb|AAM85332.1|AE013779_6 thymidylate kinase [Yersinia pestis KIM 10]
 gi|3176887|gb|AAC18855.1| thymidylate kinase [Yersinia pestis]
 gi|45436902|gb|AAS62455.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001]
 gi|108775834|gb|ABG18353.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|108779828|gb|ABG13886.1| thymidylate kinase [Yersinia pestis Antiqua]
 gi|115347352|emb|CAL20250.1| thymidylate kinase [Yersinia pestis CO92]
 gi|145210820|gb|ABP40227.1| thymidylate kinase [Yersinia pestis Pestoides F]
 gi|149290895|gb|EDM40970.1| thymidylate kinase [Yersinia pestis CA88-4125]
 gi|162354022|gb|ABX87970.1| thymidylate kinase [Yersinia pestis Angola]
 gi|165911906|gb|EDR30551.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922723|gb|EDR39874.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165993008|gb|EDR45309.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166208083|gb|EDR52563.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960284|gb|EDR56305.1| thymidylate kinase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048898|gb|EDR60306.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167053930|gb|EDR63762.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680556|gb|EEO76653.1| thymidylate kinase [Yersinia pestis Nepal516]
 gi|229689314|gb|EEO81377.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694053|gb|EEO84101.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229703469|gb|EEO90486.1| thymidylate kinase [Yersinia pestis Pestoides A]
 gi|262362311|gb|ACY59032.1| thymidylate kinase [Yersinia pestis D106004]
 gi|270338816|gb|EFA49593.1| dTMP kinase [Yersinia pestis KIM D27]
 gi|294354653|gb|ADE64994.1| thymidylate kinase [Yersinia pestis Z176003]
 gi|320014746|gb|ADV98317.1| thymidylate kinase [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 212

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTTRDTVVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + E  PD T+ LDLP  +GL R + R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A +       +D++   + V+ +I   + + +  +
Sbjct: 174 ELAASDAS-IKTIDASQPIEQVSASISQALAQWLTNQ 209


>gi|229053878|ref|ZP_04195313.1| Thymidylate kinase [Bacillus cereus AH603]
 gi|228721419|gb|EEL72939.1| Thymidylate kinase [Bacillus cereus AH603]
          Length = 208

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIGK----DVGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +R  +V++    + +   ++ I+ + +
Sbjct: 178 RFSNRIVLVNADQPMKKLIEEVVQIIEDKL 207


>gi|289208432|ref|YP_003460498.1| thymidylate kinase [Thioalkalivibrio sp. K90mix]
 gi|288944063|gb|ADC71762.1| thymidylate kinase [Thioalkalivibrio sp. K90mix]
          Length = 219

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 6/207 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F+  EGIEG+GK+T ++ +   L+    +   TREPGGT   E  R +LL   +     
Sbjct: 10  RFVVLEGIEGSGKSTQLATVVESLRATGIEPECTREPGGTALGERLRGLLLDPDLPGMCP 69

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE ++  AAR  H+ +VIRPAL  G+ ++ DRF D+S+AYQG         +  L++  
Sbjct: 70  EAELLLMFAARAQHLASVIRPALAAGRWVVSDRFTDASFAYQGAGRGLGAERVARLEDWV 129

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             ++ PD  ++LD+    GL+R   R         D  ER+ +    + R+ +L+ AR  
Sbjct: 130 QGDLRPDLVLLLDIDPATGLERAVQRGRR------DRIEREALEFFARVREAYLERARAY 183

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P+   ++D   + + VA ++   + E 
Sbjct: 184 PEHYRVIDGHGTPEQVADSVRRALDEW 210


>gi|126729338|ref|ZP_01745152.1| thymidylate kinase [Sagittula stellata E-37]
 gi|126710328|gb|EBA09380.1| thymidylate kinase [Sagittula stellata E-37]
          Length = 212

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 8/214 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SGLF+SFEGI+G+GK+T   +L   L        +TREPGG+P AE  R ++L    D 
Sbjct: 6   HSGLFLSFEGIDGSGKSTQARMLAERLSADGMTALLTREPGGSPGAEEIRALVLQGDPDR 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  E E ++F AAR DH+E  IRPAL  G++++CDRF DS+  YQG         +D L 
Sbjct: 66  WSPETELLLFTAARRDHMERTIRPALTRGEVVICDRFADSTRLYQG--RQGLRDTVDKLH 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +  + PD TIILD+  + GL R + R +  E      FE   + +  + R  FL ++
Sbjct: 124 NLMI-GMEPDLTIILDMDPEAGLSRAKARATAEE-----RFEDFGIALQLQMRAGFLALS 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              P R  ++D     + VA +I   V E +  R
Sbjct: 178 EEFPARIRVIDGNRRPEYVAADIHATVMEALDAR 211


>gi|114770996|ref|ZP_01448436.1| thymidylate kinase [alpha proteobacterium HTCC2255]
 gi|114548278|gb|EAU51164.1| thymidylate kinase [alpha proteobacterium HTCC2255]
          Length = 209

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 6/210 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEGI+G+GK+T   LL   L      V  TREPGG+  AE  R +L+S   D + 
Sbjct: 6   GLFITFEGIDGSGKSTQSQLLYDALNDLGISVIQTREPGGSIGAEIIRSLLVSGDTDRWS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I+PAL + +I++CDRF+DS+  YQG   +     +D L  I
Sbjct: 66  AETEILLFTAARRDHLEKTIQPALTKNQIVICDRFVDSTRVYQGVARADLRQTVDELHSI 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +++  PD T I+D   +  L R   R S       D FE   +   +K R  F ++++ 
Sbjct: 126 IIKK-EPDITFIIDTDPEKSLTRGLARNS-----GEDRFEEFGLEFQKKLRNGFSELSKT 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +  RCH+++   S + V+ +ILNIV +  +
Sbjct: 180 EKSRCHLINGMRSKEEVSNDILNIVKDYAK 209


>gi|93279032|pdb|2CCG|A Chain A, Crystal Structure Of His-Tagged S. Aureus Thymidylate
           Kinase Complexed With Thymidine Monophosphate (Tmp)
 gi|93279033|pdb|2CCG|B Chain B, Crystal Structure Of His-Tagged S. Aureus Thymidylate
           Kinase Complexed With Thymidine Monophosphate (Tmp)
          Length = 225

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 24  FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 80

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 81  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 140

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 141 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 195

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 196 QRFKSVNADQPLENVVEDTYQTIIKYLEK 224


>gi|227876763|ref|ZP_03994872.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|227842660|gb|EEJ52860.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
          Length = 246

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60
             G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G   
Sbjct: 29  TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 88

Query: 61  ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+        
Sbjct: 89  VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 148

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L   +   + P+ T++LDL  +I  +R   + +       D  E + +    K R  
Sbjct: 149 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMEGEGLEFQRKVRAR 205

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  +A    +   +VD++ + + +A  +   +  ++
Sbjct: 206 FRRLAEEN-ETWMVVDASLAPEEIAAQVRLRLASVL 240


>gi|157146204|ref|YP_001453523.1| thymidylate kinase [Citrobacter koseri ATCC BAA-895]
 gi|166221737|sp|A8AHX4|KTHY_CITK8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157083409|gb|ABV13087.1| hypothetical protein CKO_01960 [Citrobacter koseri ATCC BAA-895]
          Length = 213

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT  +++   L++   +D+  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKSVGDET 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+  ++GLKR + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESLDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +       +D+    ++V  +I   V   ++++ +
Sbjct: 179 ASDAS-IRTIDATQPLEAVMNDIRTTVTAWIKEQGA 213


>gi|89898307|ref|YP_515417.1| thymidylate kinase [Chlamydophila felis Fe/C-56]
 gi|123483364|sp|Q254L6|KTHY_CHLFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|89331679|dbj|BAE81272.1| thymidylate kinase [Chlamydophila felis Fe/C-56]
          Length = 207

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +   V  TREPGG+P  E  R+ +L+  +     
Sbjct: 1   MFIVIEGCEGSGKSSLTELLKNRLITEGKSVIATREPGGSPLGEQVRNWILNPSLPGISP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F A+R  H+   I PAL  GKI++CDRF DS+  YQG  +     ++ +L    
Sbjct: 61  YTELFLFLASRAQHITEKIIPALESGKIVICDRFHDSTIVYQGIAEGLGKEYVTNLCHHV 120

Query: 125 VQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V   + +PD T +LD+PVD G+KR Q + S      LD FE K ++ H K R+ FL +A 
Sbjct: 121 VGEKKFLPDLTCLLDIPVDTGIKRKQQQKS------LDKFEDKPLVYHNKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P+   I+D     ++    ++    EL
Sbjct: 175 ANPENYLILDGRQPLEASLNKVMTAYTEL 203


>gi|227529519|ref|ZP_03959568.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540]
 gi|227350604|gb|EEJ40895.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540]
          Length = 213

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 6/209 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +G FISFEG +GAGKT+ I+ ++  L+++     V  TREPGG   +E  R VL      
Sbjct: 2   AGKFISFEGPDGAGKTSVITAIQAELEQQLGKEKVMYTREPGGNHISEQVRRVLFDEHNT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++FAAAR  H+ + I PAL +GK++LCDR++DSS AYQ          +  +
Sbjct: 62  DMDGRTEALLFAAARRQHIVSEILPALKDGKVILCDRYVDSSIAYQVAGRHLGEQKIWQI 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++  ++PD TI LD+   +GL+R+        +  ++  + + +  H+  R+ FL +
Sbjct: 122 NQYAIDGLLPDLTIYLDIESKLGLQRIAE----HRADQVNRLDEEQLSFHKTVREAFLRL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            R  P+R  ++D++ S   V +++   + 
Sbjct: 178 QRENPERIKLIDASQSLPKVISDVKQTIH 206


>gi|134277826|ref|ZP_01764541.1| thymidylate kinase [Burkholderia pseudomallei 305]
 gi|167823760|ref|ZP_02455231.1| thymidylate kinase [Burkholderia pseudomallei 9]
 gi|217421693|ref|ZP_03453197.1| dTMP kinase [Burkholderia pseudomallei 576]
 gi|226197216|ref|ZP_03792793.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9]
 gi|237812640|ref|YP_002897091.1| dTMP kinase [Burkholderia pseudomallei MSHR346]
 gi|134251476|gb|EBA51555.1| thymidylate kinase [Burkholderia pseudomallei 305]
 gi|217395435|gb|EEC35453.1| dTMP kinase [Burkholderia pseudomallei 576]
 gi|225930595|gb|EEH26605.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9]
 gi|237504430|gb|ACQ96748.1| dTMP kinase [Burkholderia pseudomallei MSHR346]
          Length = 206

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R         +   D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASARRGA------ARMPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVDS+ S   +   +  ++  L
Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKQLEGVLAAL 206


>gi|37526718|ref|NP_930062.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|46576411|sp|Q7N391|KTHY_PHOLL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|36786150|emb|CAE15202.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 212

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKT+ +  +   LQ+    ++  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTSAMKTIVEMLQQHGIQNLIFTREPGGTPLAEKLRGLIKQGVE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEPLTDKAEVLMLYAARVQLVENVIKPALARGTWVVGDRHDLSSQAYQGGGRGIDKNLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD TI LDLP  IGL R + R        LD  E++ +   ++ R  +L
Sbjct: 120 SLRDTVLGDFRPDLTIYLDLPPQIGLLRARER------GELDRIEKESMDFFDRTRSRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + A         VD+A   + V  +I  ++ + ++++
Sbjct: 174 EFAAQDKS-IVTVDAAQPIEQVQADIYQVLEQWLKQQ 209


>gi|53723614|ref|YP_103080.1| thymidylate kinase [Burkholderia mallei ATCC 23344]
 gi|67640223|ref|ZP_00439038.1| dTMP kinase [Burkholderia mallei GB8 horse 4]
 gi|121601290|ref|YP_993235.1| thymidylate kinase [Burkholderia mallei SAVP1]
 gi|124386529|ref|YP_001029320.1| thymidylate kinase [Burkholderia mallei NCTC 10229]
 gi|126440272|ref|YP_001059316.1| thymidylate kinase [Burkholderia pseudomallei 668]
 gi|126448046|ref|YP_001080743.1| thymidylate kinase [Burkholderia mallei NCTC 10247]
 gi|166998743|ref|ZP_02264597.1| dTMP kinase [Burkholderia mallei PRL-20]
 gi|167719162|ref|ZP_02402398.1| thymidylate kinase [Burkholderia pseudomallei DM98]
 gi|254178271|ref|ZP_04884926.1| thymidylate kinase [Burkholderia mallei ATCC 10399]
 gi|254200026|ref|ZP_04906392.1| thymidylate kinase [Burkholderia mallei FMH]
 gi|254206360|ref|ZP_04912712.1| thymidylate kinase [Burkholderia mallei JHU]
 gi|254358225|ref|ZP_04974498.1| thymidylate kinase [Burkholderia mallei 2002721280]
 gi|59798166|sp|Q62JN9|KTHY_BURMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221726|sp|A3MKF7|KTHY_BURM7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221727|sp|A2SBK1|KTHY_BURM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221728|sp|A1V4T2|KTHY_BURMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221730|sp|A3NAE5|KTHY_BURP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52427037|gb|AAU47630.1| thymidylate kinase [Burkholderia mallei ATCC 23344]
 gi|121230100|gb|ABM52618.1| thymidylate kinase [Burkholderia mallei SAVP1]
 gi|124294549|gb|ABN03818.1| dTMP kinase [Burkholderia mallei NCTC 10229]
 gi|126219765|gb|ABN83271.1| dTMP kinase [Burkholderia pseudomallei 668]
 gi|126240916|gb|ABO04009.1| dTMP kinase [Burkholderia mallei NCTC 10247]
 gi|147749622|gb|EDK56696.1| thymidylate kinase [Burkholderia mallei FMH]
 gi|147753803|gb|EDK60868.1| thymidylate kinase [Burkholderia mallei JHU]
 gi|148027352|gb|EDK85373.1| thymidylate kinase [Burkholderia mallei 2002721280]
 gi|160699310|gb|EDP89280.1| thymidylate kinase [Burkholderia mallei ATCC 10399]
 gi|238520911|gb|EEP84367.1| dTMP kinase [Burkholderia mallei GB8 horse 4]
 gi|243065097|gb|EES47283.1| dTMP kinase [Burkholderia mallei PRL-20]
          Length = 206

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVDS+ S   +   +  ++  L
Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKQLEGVLAAL 206


>gi|16804730|ref|NP_466215.1| thymidylate kinase [Listeria monocytogenes EGD-e]
 gi|224502896|ref|ZP_03671203.1| thymidylate kinase [Listeria monocytogenes FSL R2-561]
 gi|255028105|ref|ZP_05300056.1| thymidylate kinase [Listeria monocytogenes LO28]
 gi|284800421|ref|YP_003412286.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578]
 gi|284993607|ref|YP_003415375.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923]
 gi|23821785|sp|Q8Y3Y6|KTHY_LISMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|16412193|emb|CAD00906.1| lmo2693 [Listeria monocytogenes EGD-e]
 gi|284055983|gb|ADB66924.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578]
 gi|284059074|gb|ADB70013.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923]
          Length = 208

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  +
Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   VD+  + + +   IL  +   +
Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207


>gi|260597469|ref|YP_003210040.1| thymidylate kinase [Cronobacter turicensis z3032]
 gi|260216646|emb|CBA29964.1| Thymidylate kinase [Cronobacter turicensis z3032]
          Length = 212

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 12/219 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M+S  +I  EG+EGAGKTT  +L+   L+     D+  TREPGGT  AE  R ++L    
Sbjct: 1   MSS-KYIVIEGLEGAGKTTARNLVVETLKSLGITDMTFTREPGGTVLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +     AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDREL 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R  
Sbjct: 120 LATLRQTVLGDFAPDLTLYLDVDPRIGLERARAR------GELDRIEQESLDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L++A   P R   +D+     +V+ +I + +   VQ++
Sbjct: 174 YLELAAADP-RIITIDACQPLDAVSRDIRSAIARWVQEQ 211


>gi|47570434|ref|ZP_00241070.1| thymidylate kinase [Bacillus cereus G9241]
 gi|47552892|gb|EAL11307.1| thymidylate kinase [Bacillus cereus G9241]
          Length = 208

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLIEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + + +  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEGISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|21282166|ref|NP_645254.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485346|ref|YP_042567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|23821762|sp|Q8NY05|KTHY_STAAW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56748991|sp|Q6GC06|KTHY_STAAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21203602|dbj|BAB94302.1| tmk [Staphylococcus aureus subsp. aureus MW2]
 gi|49243789|emb|CAG42214.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 205

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 4   FITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204


>gi|311028959|ref|ZP_07707049.1| thymidylate kinase [Bacillus sp. m3-13]
          Length = 212

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 4/213 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+FEG EGAGKT+ I  L   L  + + + +TREPGG   AE  R+V+L C   E 
Sbjct: 2   KGLFITFEGPEGAGKTSVIQKLGAELTEQEFPILLTREPGGIAIAEQIRNVILDCDNTEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E KI+LCDRF+DSS AYQG         + S+ E
Sbjct: 62  DARTEALLYAAARRQHLVERVIPALKENKIVLCDRFIDSSLAYQGYARGIGVEDVLSINE 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +++MP  TI  D+  + GLKR+    +      ++  +++ +  H K ++ +  +  
Sbjct: 122 FATEKMMPSLTIYFDIEPEAGLKRIAANNN----REINRLDQEKLDFHYKVKEGYDLVKE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +R  +VD++  F+SV   +  ++     K 
Sbjct: 178 KYGERIRVVDASMDFESVCNQVREVLISYFSKH 210


>gi|256833407|ref|YP_003162134.1| thymidylate kinase [Jonesia denitrificans DSM 20603]
 gi|256686938|gb|ACV09831.1| thymidylate kinase [Jonesia denitrificans DSM 20603]
          Length = 221

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 11/217 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++GLF++FEG +G+GKTT   L  ++L     +D  +TREPGGT   +  R +LL    D
Sbjct: 8   HAGLFLTFEGGDGSGKTTQARLAAQWLSDTYAHDALLTREPGGTELGQHIRQLLLHG--D 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + G  AEA+++AA R  HV  VIRPAL  G+ ++CDR+ DSS AYQG   +     +  L
Sbjct: 66  DMGPRAEALLYAADRSHHVHTVIRPALSLGRTVVCDRYFDSSIAYQGGGRTLTPKTIRDL 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +V  ++PD T+++D+P  +G  R             D  ER     H+     +  +
Sbjct: 126 SLWAVDGLIPDLTVLIDVPARVGAAR--------REGEPDRLERAGDDFHDTTHATYRHL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           A  +P+R  IVD   +   VA  +   + + +  RV+
Sbjct: 178 AEQEPERWVIVDGIGTIDEVAGRVRAALVDRLGARVT 214


>gi|298291754|ref|YP_003693693.1| thymidylate kinase [Starkeya novella DSM 506]
 gi|296928265|gb|ADH89074.1| thymidylate kinase [Starkeya novella DSM 506]
          Length = 243

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 4/209 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T +  L+  L     +   TREPGG+  AE  RH++LS      G
Sbjct: 28  GRFITFEGGEGAGKSTQVRRLREKLAELGIEAVATREPGGSTGAEIMRHLILSGAAKPLG 87

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA +FAAAR DH++  IRPAL  G  ++CDRF DS+ AYQG   +     + +L+E+
Sbjct: 88  PLAEAALFAAARADHLDATIRPALARGAWVVCDRFADSTRAYQGVLGNIDPRLIAALEEV 147

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V +  PD T+ILD+P + GL R   R  +      D FE + V  H + R+ F  +A N
Sbjct: 148 TVGDTRPDLTLILDIPAEEGLSRASARSGV----AADRFESEGVGFHRRLREAFRALAEN 203

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P RC ++D+     +VA  I   V E +
Sbjct: 204 EPQRCVLIDARPDADTVAEAIWTAVQERL 232


>gi|300691472|ref|YP_003752467.1| thymidylate kinase [Ralstonia solanacearum PSI07]
 gi|299078532|emb|CBJ51187.1| thymidylate kinase [Ralstonia solanacearum PSI07]
          Length = 205

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  +I   R+       ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A  +P+R  I+D+A +   +  ++  ++  L
Sbjct: 173 RRAAAEPERFVIIDAARARDDIRKDLEKLLASL 205


>gi|156934415|ref|YP_001438331.1| thymidylate kinase [Cronobacter sakazakii ATCC BAA-894]
 gi|166221741|sp|A7MFR1|KTHY_ENTS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|156532669|gb|ABU77495.1| hypothetical protein ESA_02246 [Cronobacter sakazakii ATCC BAA-894]
          Length = 212

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 12/219 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M+S  +I  EG+EGAGKTT  +L+   L+     D+  TREPGGT  AE  R ++L    
Sbjct: 1   MSS-KYIVIEGLEGAGKTTARNLVVETLKSLGVTDMTFTREPGGTVLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +     AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRQL 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R  
Sbjct: 120 LATLRQAVLGDFAPDLTLYLDVDPRIGLERARAR------GELDRIEQESLDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L++A   P R   +D+    ++V+ +I   V   VQ++
Sbjct: 174 YLELAAADP-RIITIDACQPLEAVSHDIRATVTRWVQEQ 211


>gi|306817710|ref|ZP_07451452.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
 gi|304649524|gb|EFM46807.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239]
          Length = 246

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60
             G F++FEG +G GK+T I L   +++ + ++V  TREPGGT      R +LL  G   
Sbjct: 29  TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 88

Query: 61  ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +    AEA++FAA R  HV  +I PAL  GKI++ DRF+ SS AYQG+        
Sbjct: 89  VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 148

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L   +   + P+ T++LDL  +I  +R   + +       D  E + +    K R  
Sbjct: 149 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMEGEGLEFQRKVRAR 205

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  +A    +   +VD++ + + +A  +   +  ++
Sbjct: 206 FRRLAEGN-ETWMVVDASLAPEEIAAQVRLRLASVL 240


>gi|295096208|emb|CBK85298.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 213

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 12/219 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L      D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVDTLTSLGVADMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL EGK ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALAEGKWVIGDRHDLSTQAYQGGGRGIDQAM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L++A         +D+  S + V  +I   V + +Q++
Sbjct: 174 YLELAGQDK-TIRTIDATQSLEDVTRDIQQTVTQWLQEQ 211


>gi|148270766|ref|YP_001245226.1| dTMP kinase [Thermotoga petrophila RKU-1]
 gi|166223125|sp|A5IN77|KTHY_THEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147736310|gb|ABQ47650.1| thymidylate kinase [Thermotoga petrophila RKU-1]
          Length = 197

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 15/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL R+L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R   V   I+  L EG ++L DR+ DSS AYQG   +     ++ L + +
Sbjct: 58  KAELFLFLASRNLLVME-IKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  L R            L+ FE++     E+ R+ +L +A+  
Sbjct: 117 TDSLVPDLTFYIDVDVETALNR---------KGELNRFEKR--EFLERVREGYLVLAKEH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P+R  ++D   S + +  +++  V  
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVER 191


>gi|167562453|ref|ZP_02355369.1| thymidylate kinase [Burkholderia oklahomensis EO147]
 gi|167569636|ref|ZP_02362510.1| thymidylate kinase [Burkholderia oklahomensis C6786]
          Length = 206

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 106/215 (49%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS----LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      L+  L +    V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGKSGKHVVVTREPGGTRLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A+  P R  IVDS+     +   +  ++  L
Sbjct: 172 YLRRAQEAPHRFAIVDSSEPIPQIRKKLEGVLAAL 206


>gi|17546503|ref|NP_519905.1| thymidylate kinase [Ralstonia solanacearum GMI1000]
 gi|23821784|sp|Q8XYH4|KTHY_RALSO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|17428801|emb|CAD15486.1| probable thymidylate kinase (dtmp kinase) protein [Ralstonia
           solanacearum GMI1000]
          Length = 205

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  ++   R+       ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A  +P R  ++D+A +   +  ++  ++  L
Sbjct: 173 RRAAAEPGRFVVIDAARARDDIRKDLEKLLASL 205


>gi|161503708|ref|YP_001570820.1| thymidylate kinase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|189030840|sp|A9MGB6|KTHY_SALAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|160865055|gb|ABX21678.1| hypothetical protein SARI_01792 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 213

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              P R   +D+     +V  +I   V   VQ + +
Sbjct: 179 AQDP-RIRTIDATQPLDAVMRDIRATVTTWVQGQAA 213


>gi|217966109|ref|YP_002351787.1| thymidylate kinase [Listeria monocytogenes HCC23]
 gi|254808300|sp|B8DAU8|KTHY_LISMH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|217335379|gb|ACK41173.1| thymidylate kinase [Listeria monocytogenes HCC23]
 gi|307572281|emb|CAR85460.1| tmk [Listeria monocytogenes L99]
          Length = 208

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAVGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  +
Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   VD+  + + +   IL  +   +
Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207


>gi|161508727|ref|YP_001574386.1| thymidylate kinase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253735215|ref|ZP_04869380.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|297591609|ref|ZP_06950246.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8]
 gi|304380498|ref|ZP_07363175.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|160367536|gb|ABX28507.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253726775|gb|EES95504.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|297575478|gb|EFH94195.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8]
 gi|304340943|gb|EFM06866.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312436430|gb|ADQ75501.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH60]
 gi|320139433|gb|EFW31311.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320144210|gb|EFW35978.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 208

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN    FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    
Sbjct: 1   MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +
Sbjct: 58  NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E ++  + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +
Sbjct: 118 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I  N+  R   V++    ++V  +    + + ++K
Sbjct: 173 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 207


>gi|114570004|ref|YP_756684.1| thymidylate kinase [Maricaulis maris MCS10]
 gi|114340466|gb|ABI65746.1| thymidylate kinase [Maricaulis maris MCS10]
          Length = 211

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 88/196 (44%), Positives = 114/196 (58%), Gaps = 5/196 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT I  L   L  ++ DV VTREPGGTP AE  R +LL+  V+
Sbjct: 1   MKHGKFITLEGGEGAGKTTLIQGLTHALADRDIDVVVTREPGGTPGAELLRDLLLNGEVE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + +  EA++  AAR+DHVE  I+PAL  G  +LCDRF DS+ AYQG     +   L  L
Sbjct: 61  RWSSRTEALLMYAARVDHVERRIKPALSRGAWVLCDRFADSTRAYQGVAGGLEPAELADL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q  ++ +   D T+I+DL  +IGLKR   R           FE+ D   H + RQ FLDI
Sbjct: 121 QRFALGDFSADMTLIVDLDPEIGLKRTLQRGEKIT-----RFEKFDTSYHRRLRQAFLDI 175

Query: 181 ARNQPDRCHIVDSAHS 196
           A   P+RC ++D   S
Sbjct: 176 ASEDPERCVVLDGTQS 191


>gi|210630412|ref|ZP_03296447.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279]
 gi|210160494|gb|EEA91465.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279]
          Length = 225

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 6/211 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EGI+G GK+T  +L++  L    YDV   REPGG   +E  R VLL    D
Sbjct: 1   MTKGHFITVEGIDGVGKSTQAALMEVLLDSAGYDVLRLREPGGVSISEQIRAVLLDPAND 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E G   E +++ AAR   V  VIRPAL  GK ++CDRF DS+ AYQ   D      +   
Sbjct: 61  EMGDMCELLLYEAARAQLVHQVIRPALTAGKTVICDRFYDSTTAYQSFADGLDRDMVFQA 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E++V    PD T++ DLPV+   +R  +R      +  D  E K     ++  + F  +
Sbjct: 121 NELAVDGCRPDLTLVFDLPVEDAHRRRSDR------SAEDRLELKGRDFQQRVSEGFRAV 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A ++PDR  +VD+  S   V + +++ +   
Sbjct: 175 AADEPDRVRLVDAGGSIAEVFSIVVDELRAA 205


>gi|326802968|ref|YP_004320786.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650724|gb|AEA00907.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 226

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 10/224 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+FISFEG +G+GKTT I  LK  L Q        +REPGG   AE  R ++LS    E 
Sbjct: 3   GVFISFEGPDGSGKTTLIKGLKARLDQDLKQAPIFSREPGGDRIAEEIRDIILSPVNTEL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A +EA+++AA+R  H+   IRPAL  G ++LCDR++DSS AYQG         +  +  
Sbjct: 63  DARSEALLYAASRAQHLAQKIRPALAAGNMVLCDRYVDSSIAYQGYGRKLGGQAVQLINA 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  ++PD T+  D+  + G+ R++       +  ++  +++ +  H +  Q + D+ +
Sbjct: 123 FAIDGLLPDLTLYCDISAEEGIARIEA----GRTNEINRLDQESIAFHRRVVQGYQDLLK 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE-----LVQKRVSPLSS 221
             PDR   +D++   +++      ++ +      + ++ SP  +
Sbjct: 179 ENPDRIVPIDASQPAEAMQAAAYELIRQRFPQFFLSRKDSPNDA 222


>gi|71064726|ref|YP_263453.1| thymidylate kinase [Psychrobacter arcticus 273-4]
 gi|71037711|gb|AAZ18019.1| thymidylate kinase [Psychrobacter arcticus 273-4]
          Length = 225

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 105/213 (49%), Gaps = 14/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEG EG GKTT I  L   LQ    D   TREPGG+P AE  R +LL       
Sbjct: 18  QGHFISFEGTEGVGKTTAIEQLCARLQANGIDYLRTREPGGSPFAERLREILLDP-NTAI 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---- 118
             + E ++  AAR DH++ VI PAL  G  ++CDRF DS+ AYQG   +     +     
Sbjct: 77  NDDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDATVRGKID 136

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +++   Q  +P+ T+ LDLPV  G+ R   R      +  D FE++      +  + F
Sbjct: 137 TLIEQFVTQ--LPELTLWLDLPVLEGMARANKR------SAADRFEQQATDFFTRVHKGF 188

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             +A   P R   +D++ S   V+  I   V E
Sbjct: 189 RTLADEYPKRIQRIDASGSADEVSARIWQKVEE 221


>gi|332042231|gb|EGI78557.1| thymidylate kinase [Hylemonella gracilis ATCC 19624]
          Length = 211

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 15/213 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG F+SFEGI+GAGK+THI  L + L+ + + V +TREPGGTP AE  R ++L    ++ 
Sbjct: 2   SGFFVSFEGIDGAGKSTHIERLAQVLREQGHMVTLTREPGGTPLAERLRALVL---AEKM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++  AAR DH++ VI PAL  G  +LCDR+ D+SYAYQG         L +L+ 
Sbjct: 59  DALTEALLVFAARRDHLQTVIEPALARGDAVLCDRYTDASYAYQGGGRGLDVSVLATLER 118

Query: 123 I------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                  +     PD T+  DL  ++  +R+        +   D FE + V    +  + 
Sbjct: 119 WVQAKPGAAGLRQPDLTLWFDLAPELAAERLSG------ARAPDKFEAEPVAFFRRVAEG 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +   A   P R   +D+A S ++V   +L +V 
Sbjct: 173 YARRAAEDPGRFARLDAAQSREAVWDELLRVVR 205


>gi|22299598|ref|NP_682845.1| thymidylate kinase [Thermosynechococcus elongatus BP-1]
 gi|46576557|sp|Q8DHA4|KTHY_THEEB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|22295782|dbj|BAC09607.1| thymidylate kinase [Thermosynechococcus elongatus BP-1]
          Length = 241

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 27/241 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----------DVHVTREPGGTPAAEAAR 51
           +GLFI  EG EGAGKTT +  +  +L+   +            + +TREPGGTP  +  R
Sbjct: 9   AGLFIVLEGGEGAGKTTQMGAIATWLENSGWLAKLRSCHVDPPLLLTREPGGTPLGQGLR 68

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
            +LL   +      AE +++AA R  HV   IRP L  G I+LCDR+  S+ AYQG    
Sbjct: 69  QLLLHSDL-AIDPLAELLLYAADRAQHVAMGIRPQLQRGGIVLCDRYTASTVAYQGYGRG 127

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                +  + +++   +  D  + LDLPV +GL R Q R         D  E+  V  HE
Sbjct: 128 LDLQIIQHINQMATGGLGADLVLWLDLPVAVGLARTQQR------GRGDRLEQNAVAFHE 181

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-------ELVQKRVSPLSSKKD 224
           + RQ FL +A+   DR   +D+      V   I   +        E +++R++     +D
Sbjct: 182 RVRQGFLALAQQGSDRWQRIDADQPPDQVTQAIQECLAAHLHRWFETLKQRLT--GGDRD 239

Query: 225 I 225
           +
Sbjct: 240 L 240


>gi|304439671|ref|ZP_07399573.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371851|gb|EFM25455.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 202

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 10/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG +G GKTT + ++ + L+   Y V  TREPGGT  +E  R ++L    DE 
Sbjct: 2   KGKFITFEGPDGCGKTTVVDMIYKKLESLGYRVIKTREPGGTDISEKIRDLILDVNNDEM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA+R  H E  I P L +G I+LC+R++ SSYAYQG         + ++ +
Sbjct: 62  SPRCEALLYAASRAQHTEEKIVPYLNKGYIVLCERYILSSYAYQGYGRGLLEGVV-AIND 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD TI+L     +GL+R       +     D  E +    H+K  + + +IA+
Sbjct: 121 FATAGIRPDLTILLMGDYRVGLER-------KNEMGADRLELESTDFHKKVYKGYEEIAK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +     ++D+    ++V  N L  + E+++
Sbjct: 174 YED--VTVIDANSELETVFNNTLEKILEMIE 202


>gi|70727528|ref|YP_254444.1| thymidylate kinase [Staphylococcus haemolyticus JCSC1435]
 gi|123659174|sp|Q4L3D9|KTHY_STAHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|68448254|dbj|BAE05838.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 203

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 110/208 (52%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT +  +   L  ++Y +  TREPGG P  E  R V+L          
Sbjct: 4   FITFEGPEGSGKTTVLQRVSEKL-AQDYQLIATREPGGVPTGEEIRKVVLEGAN--MDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         +  L + ++
Sbjct: 61  TEAMLFAASRREHLVEKVVPALNDNKIVLCDRYIDSSLAYQGYARGIGIEEVKQLNDFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G  R+     L+     +  +++D+  HEK  + +  I +  P
Sbjct: 121 NGLYPDLTIYLDITAEVGRDRI-----LKNQRDQNRLDKEDIAFHEKVIEGYRQIIQETP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R  +VD+  +   V      I+   ++
Sbjct: 176 QRFAVVDATRNIDDVVNETYEIILNFLK 203


>gi|83748622|ref|ZP_00945641.1| Thymidylate kinase [Ralstonia solanacearum UW551]
 gi|207723527|ref|YP_002253926.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           MolK2]
 gi|207743119|ref|YP_002259511.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           IPO1609]
 gi|83724746|gb|EAP71905.1| Thymidylate kinase [Ralstonia solanacearum UW551]
 gi|206588728|emb|CAQ35691.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           MolK2]
 gi|206594516|emb|CAQ61443.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum
           IPO1609]
          Length = 205

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  +I   R+       ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A  +P+R  I+D+  +   +  ++  ++  L
Sbjct: 173 RRAAAEPERFVIIDADRARDDIRKDLEQLLASL 205


>gi|206977923|ref|ZP_03238810.1| thymidylate kinase [Bacillus cereus H3081.97]
 gi|206743829|gb|EDZ55249.1| thymidylate kinase [Bacillus cereus H3081.97]
 gi|324324020|gb|ADY19280.1| thymidylate kinase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 208

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDITFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|85708666|ref|ZP_01039732.1| thymidylate kinase [Erythrobacter sp. NAP1]
 gi|85690200|gb|EAQ30203.1| thymidylate kinase [Erythrobacter sp. NAP1]
          Length = 216

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 4/213 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+FEG EG GK+T    L   L+ +   V VTREPGGTP AEA R +LL    D 
Sbjct: 5   TRGLFIAFEGGEGTGKSTQTLKLADALRARGKVVEVTREPGGTPGAEAIRQLLLHPPGDG 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +GA+AEA++FAAAR DHV   I+P+L +G  ++ DRF+DSS AYQG         + +L 
Sbjct: 65  WGAQAEALLFAAARSDHVAQHIKPSLEKGVWVVTDRFVDSSRAYQGGAGGLGDEAITALH 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD TI+L++  D    R+  R + R+    D    +    H      F  +A
Sbjct: 125 AFGSDGLRPDLTILLEVDED----RLTQRLAERDGGTSDAIGGRSADYHRAVAARFRKLA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P+   IVD   +   V   +L+ + +L+ +
Sbjct: 181 EADPNGFRIVDGTGTPDEVHNRVLDALADLLGQ 213


>gi|53719072|ref|YP_108058.1| thymidylate kinase [Burkholderia pseudomallei K96243]
 gi|76810598|ref|YP_333838.1| thymidylate kinase [Burkholderia pseudomallei 1710b]
 gi|126454444|ref|YP_001066584.1| thymidylate kinase [Burkholderia pseudomallei 1106a]
 gi|167845304|ref|ZP_02470812.1| thymidylate kinase [Burkholderia pseudomallei B7210]
 gi|242317737|ref|ZP_04816753.1| dTMP kinase [Burkholderia pseudomallei 1106b]
 gi|254189148|ref|ZP_04895659.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197999|ref|ZP_04904421.1| thymidylate kinase [Burkholderia pseudomallei S13]
 gi|254260912|ref|ZP_04951966.1| dTMP kinase [Burkholderia pseudomallei 1710a]
 gi|59798178|sp|Q63V08|KTHY_BURPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123598846|sp|Q3JRG5|KTHY_BURP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221729|sp|A3NW63|KTHY_BURP0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52209486|emb|CAH35438.1| putative thymidylate kinase [Burkholderia pseudomallei K96243]
 gi|76580051|gb|ABA49526.1| thymidylate kinase [Burkholderia pseudomallei 1710b]
 gi|126228086|gb|ABN91626.1| thymidylate kinase [Burkholderia pseudomallei 1106a]
 gi|157936827|gb|EDO92497.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237]
 gi|169654740|gb|EDS87433.1| thymidylate kinase [Burkholderia pseudomallei S13]
 gi|242140976|gb|EES27378.1| dTMP kinase [Burkholderia pseudomallei 1106b]
 gi|254219601|gb|EET08985.1| dTMP kinase [Burkholderia pseudomallei 1710a]
          Length = 206

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R   R ++R     D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVDS+ S   +   +  ++  L
Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRRQLEGVLAAL 206


>gi|260913250|ref|ZP_05919732.1| dTMP kinase [Pasteurella dagmatis ATCC 43325]
 gi|260632837|gb|EEX51006.1| dTMP kinase [Pasteurella dagmatis ATCC 43325]
          Length = 215

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 8/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M +G FI  EGIEGAGKTT    + R L      D+  TREPGGTP AE  RH++     
Sbjct: 5   MKTGKFIVLEGIEGAGKTTARDSIVRALNAYGIQDIVFTREPGGTPLAEKLRHLIKHETE 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    +AE ++  AAR+  VENVI+PAL EGK ++ DR   SS AYQG         L +
Sbjct: 65  EPVTDKAELLMLYAARIQLVENVIKPALAEGKWVIGDRHDMSSQAYQGGGRQLDKTLLLT 124

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+E  + +  PD T+ LD+   +GL R + R        LD  E++++   ++ RQ +L+
Sbjct: 125 LKETVLGDFEPDLTLYLDIDPVLGLTRARGR------GALDRIEQQNIDFFQRTRQRYLE 178

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + ++ P  C  +D++H    V+ ++ + V   +
Sbjct: 179 LVQDNPKACC-IDASHEIDKVSADVQSAVENWL 210


>gi|160871899|ref|ZP_02062031.1| thymidylate kinase [Rickettsiella grylli]
 gi|159120698|gb|EDP46036.1| thymidylate kinase [Rickettsiella grylli]
          Length = 218

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 8/210 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62
            FI+ EGIEG GK+T +  +  +LQ+ +  + +TREPGGTP AEA R +LL      +  
Sbjct: 7   RFITLEGIEGVGKSTQLKFVADYLQQAHIPLTITREPGGTPIAEAIRSLLLQSDFSPEML 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++F AAR  H+  VI+PAL  G  +LCDRF ++SYAYQG        F+ SL  
Sbjct: 67  IPETELLLFFAARAQHIHYVIKPALQRGDWVLCDRFTETSYAYQGGGRGIDVAFIRSLHL 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              Q++  +  ++LD PVDI L+R+++R +       D  E +      + R  +L+ A+
Sbjct: 127 WVQQDLNVNVVLLLDAPVDIALRRMRHRKTA------DRIEAEKHDFFTRARASYLERAQ 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +PD   ++D++ S + V   I N++  L+
Sbjct: 181 QRPDVYQVIDASRSLKDVQKQIKNVLDRLL 210


>gi|258424483|ref|ZP_05687362.1| thymidylate kinase [Staphylococcus aureus A9635]
 gi|257845352|gb|EEV69387.1| thymidylate kinase [Staphylococcus aureus A9635]
          Length = 210

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 9/215 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN    FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    
Sbjct: 3   MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     EA++FAA+R +H+   + PAL EGKI+LCDR++DSS AYQG         + +
Sbjct: 60  NDMDIRTEAMLFAASRREHLVLKVIPALKEGKIVLCDRYIDSSLAYQGYARGIGVEEVRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E ++  + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +
Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I  N+  R   V++    ++V  +    + + ++K
Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|289449651|ref|YP_003475316.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184198|gb|ADC90623.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 212

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 6/214 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+FEGI+G+GKTT ++LL  +L+R+N  V V REPGGT   EA R +LLS    
Sbjct: 1   MRKGQLITFEGIDGSGKTTQLNLLADYLRRQNEAVVVLREPGGTELGEAVRSLLLSSKYK 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +E  +F AAR      VI PAL  GK +LCDRF+DS+ AYQG         L SL
Sbjct: 61  KMSDRSELYLFLAARAQLCNEVIAPALSLGKFVLCDRFIDSTIAYQGYGRGLDPATLKSL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++   + P+ T  L +PV   ++R+  R        LD  E +     +   + +  +
Sbjct: 121 NSMATAGISPNITFYLRIPVATAVERMMVRDI-----ALDRMEAQADHFRQAVVKGYDVL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A  +P R   + +  S +++   ILN V   + K
Sbjct: 176 AATEP-RFVTIKADQSIENIHEIILNEVRRFIYK 208


>gi|145219852|ref|YP_001130561.1| thymidylate kinase [Prosthecochloris vibrioformis DSM 265]
 gi|189030836|sp|A4SF00|KTHY_PROVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145206016|gb|ABP37059.1| thymidylate kinase [Chlorobium phaeovibrioides DSM 265]
          Length = 215

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 4/216 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L   L+ +  +V   REPGGT  AE  R +LL    D    
Sbjct: 1   MLITFEGIDGAGKSTQIRKLAAHLRSQGQEVLTLREPGGTEVAENIRLILLESRHD-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V  VIRPAL EG  ++ DRF DS+ AYQG         L+S+  +S
Sbjct: 60  VGELLLFSASRAELVNEVIRPALKEGTTVILDRFFDSTTAYQGYGRGIDLPTLNSIIALS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  S+    ++  LD  ER  +  + K  + +  I 
Sbjct: 120 TGGLKPDITFYLDILPEEALIRKFSEKSIPLAFDNDELDRMERSGLDFYRKVYEGYRCIM 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + +PDR   +++  S Q + T +   + E    R S
Sbjct: 180 QEEPDRFVSINARKSIQEIHTTVTKTLKEQRAGRQS 215


>gi|151220658|ref|YP_001331480.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257424593|ref|ZP_05601021.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427259|ref|ZP_05603660.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429895|ref|ZP_05606281.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432598|ref|ZP_05608960.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435503|ref|ZP_05611553.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876]
 gi|257794277|ref|ZP_05643256.1| thymidylate kinase [Staphylococcus aureus A9781]
 gi|258407206|ref|ZP_05680351.1| thymidylate kinase [Staphylococcus aureus A9763]
 gi|258420828|ref|ZP_05683764.1| thymidylate kinase [Staphylococcus aureus A9719]
 gi|258429598|ref|ZP_05688272.1| thymidylate kinase [Staphylococcus aureus A9299]
 gi|258446131|ref|ZP_05694292.1| thymidylate kinase [Staphylococcus aureus A6300]
 gi|258448039|ref|ZP_05696169.1| thymidylate kinase [Staphylococcus aureus A6224]
 gi|258452837|ref|ZP_05700832.1| thymidylate kinase [Staphylococcus aureus A5948]
 gi|258453814|ref|ZP_05701787.1| thymidylate kinase [Staphylococcus aureus A5937]
 gi|282895088|ref|ZP_06303308.1| thymidylate kinase [Staphylococcus aureus A8117]
 gi|282903066|ref|ZP_06310958.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160]
 gi|282904857|ref|ZP_06312717.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282907803|ref|ZP_06315642.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282910120|ref|ZP_06317926.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282913308|ref|ZP_06321099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899]
 gi|282923013|ref|ZP_06330699.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101]
 gi|282925555|ref|ZP_06333208.1| thymidylate kinase [Staphylococcus aureus A9765]
 gi|283957270|ref|ZP_06374728.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293500358|ref|ZP_06666210.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509296|ref|ZP_06668012.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809]
 gi|293515884|ref|ZP_06670574.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015]
 gi|150373458|dbj|BAF66718.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257272620|gb|EEV04740.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275910|gb|EEV07378.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279411|gb|EEV10006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282463|gb|EEV12596.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257285140|gb|EEV15257.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876]
 gi|257788249|gb|EEV26589.1| thymidylate kinase [Staphylococcus aureus A9781]
 gi|257841164|gb|EEV65613.1| thymidylate kinase [Staphylococcus aureus A9763]
 gi|257843220|gb|EEV67633.1| thymidylate kinase [Staphylococcus aureus A9719]
 gi|257849657|gb|EEV73624.1| thymidylate kinase [Staphylococcus aureus A9299]
 gi|257855108|gb|EEV78050.1| thymidylate kinase [Staphylococcus aureus A6300]
 gi|257858729|gb|EEV81602.1| thymidylate kinase [Staphylococcus aureus A6224]
 gi|257859523|gb|EEV82376.1| thymidylate kinase [Staphylococcus aureus A5948]
 gi|257863985|gb|EEV86740.1| thymidylate kinase [Staphylococcus aureus A5937]
 gi|282314532|gb|EFB44919.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101]
 gi|282322779|gb|EFB53099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899]
 gi|282325968|gb|EFB56274.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282328318|gb|EFB58592.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331974|gb|EFB61483.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282592459|gb|EFB97471.1| thymidylate kinase [Staphylococcus aureus A9765]
 gi|282596492|gb|EFC01452.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160]
 gi|282762506|gb|EFC02646.1| thymidylate kinase [Staphylococcus aureus A8117]
 gi|283791194|gb|EFC30004.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290921292|gb|EFD98350.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096318|gb|EFE26578.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467841|gb|EFF10351.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809]
          Length = 210

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN    FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    
Sbjct: 3   MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +
Sbjct: 60  NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E ++  + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +
Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I  N+  R   V++    ++V  +    + + ++K
Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|227326856|ref|ZP_03830880.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 219

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT  +++   L+     DV  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGMA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  V+NVI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R + R        LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRSRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A    D    +D++ S  +V+ +I
Sbjct: 174 ELAAED-DSILTIDASQSIDAVSADI 198


>gi|302332195|gb|ADL22388.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 205

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 4   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRTLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRNQNRLDQEDLKFHEKVIEGYQEIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204


>gi|300023248|ref|YP_003755859.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525069|gb|ADJ23538.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 209

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 8/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG GK+T    L   L+R    V +TREPGGTP  E  R ++      
Sbjct: 1   MKRGKFITFEGGEGVGKSTQAKRLAERLERAGVPVIITREPGGTPVGEDVRDLI--MKDR 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++FAAAR +HV +VIRPAL +G  ++ DRF+DS+  YQG+R   +   +  L
Sbjct: 59  PTDPMTELLLFAAARAEHVTSVIRPALDDGTWVISDRFIDSTRVYQGKRYGLEPELISLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  +V    PD T+ILDLP   G++R QNR        L  ++ + +  HE  R+ FL+I
Sbjct: 119 ERYTVSPDFPDLTLILDLPATEGVERAQNR------GTLSRYDAERIETHEVLRKGFLEI 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A ++P RC ++D++    SV T +   V   +
Sbjct: 173 ATSEPKRCVLIDASLPVSSVETAVWQAVSAHL 204


>gi|148358930|ref|YP_001250137.1| thymidylate kinase [Legionella pneumophila str. Corby]
 gi|296106978|ref|YP_003618678.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|166221751|sp|A5IBP1|KTHY_LEGPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148280703|gb|ABQ54791.1| thymidylate kinase [Legionella pneumophila str. Corby]
 gi|295648879|gb|ADG24726.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy]
          Length = 212

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 8/215 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL EG+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNEGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              ++   PD T+ LD+  ++G+ R ++R         D  E++ +    +    +  + 
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHILV 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +  P+   ++D+    + V ++I +++ E ++  +
Sbjct: 179 KQNPE-IMMIDANRPLEDVQSSIQSVIEEFIEHNL 212


>gi|282918262|ref|ZP_06326002.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427]
 gi|282317828|gb|EFB48197.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427]
          Length = 210

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN    FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    
Sbjct: 3   MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +
Sbjct: 60  NDMDIRTEAMLFAASRREHLVLKVVPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E ++  + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +
Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I  N+  R   V++    ++V  +    + + ++K
Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209


>gi|119714651|ref|YP_921616.1| thymidylate kinase [Nocardioides sp. JS614]
 gi|119535312|gb|ABL79929.1| thymidylate kinase [Nocardioides sp. JS614]
          Length = 222

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+F+  EG EG+GK+T   LL+ +L+ + ++V +T EPG T      R ++LS      
Sbjct: 16  TGVFVCLEGGEGSGKSTQSGLLRDWLETQGFEVLLTFEPGDTEVGRKLRAIVLSPETGAI 75

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA+++AA + +HV+ V++PAL  G +++ DR++ S  AYQG   +     ++ +  
Sbjct: 76  SDRTEALLYAADKAEHVDTVVQPALDRGAVVITDRYVASMLAYQGAGRALDVGEVEQVAR 135

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  ++ P  T++LDL  + GL R + R         D  E + V  H + R+ FL +A 
Sbjct: 136 WATHDLRPHLTVVLDLEPEHGLGRFEER---------DRIEGESVEFHRRVREGFLGMAA 186

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             PD   ++D+    + +A  + + V  L+ +
Sbjct: 187 ADPDHYLVLDARGDREEIAGRVRDRVAPLLDR 218


>gi|145636277|ref|ZP_01791946.1| thymidylate kinase [Haemophilus influenzae PittHH]
 gi|145270442|gb|EDK10376.1| thymidylate kinase [Haemophilus influenzae PittHH]
          Length = 210

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  R ++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRDLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   IGL R + R        LD  E+ D+    + R  +L + 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPSIGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I + V   
Sbjct: 176 KDNP-KAVMINAEQSIELVQADIESAVKNW 204


>gi|313606342|gb|EFR83276.1| thymidylate kinase [Listeria monocytogenes FSL F2-208]
          Length = 208

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +P+ T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  +
Sbjct: 120 NLYAIEDTLPNRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   VD+  + + +   IL  +   +
Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207


>gi|300704091|ref|YP_003745693.1| thymidylate kinase [Ralstonia solanacearum CFBP2957]
 gi|299071754|emb|CBJ43078.1| thymidylate kinase [Ralstonia solanacearum CFBP2957]
          Length = 205

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L+    Q + P  T++ DL  +I   R+       ++   D FE +      + R  +L
Sbjct: 119 ALEHWVQQGLQPTKTLLFDLAPEIAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A   P+R  I+D+  +   +  ++  ++  L
Sbjct: 173 RRAAADPERFVIIDADRARDDIRKDLEKLLASL 205


>gi|253688875|ref|YP_003018065.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259494276|sp|C6DKS8|KTHY_PECCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|251755453|gb|ACT13529.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 219

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  FI  EG+EGAGKTT   ++   L+     +V  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARHIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMT 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    +AE ++  AAR+  V+NVI+PAL  G+ ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALANGQWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R + R        LD  E++ +   E+ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQESLAFFERTRSRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A    D    +D++ S ++V+ +I
Sbjct: 174 ELAAED-DSILTIDASQSIEAVSADI 198


>gi|152969650|ref|YP_001334759.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238894132|ref|YP_002918866.1| thymidylate kinase [Klebsiella pneumoniae NTUH-K2044]
 gi|329999483|ref|ZP_08303437.1| dTMP kinase [Klebsiella sp. MS 92-3]
 gi|166221748|sp|A6T7F8|KTHY_KLEP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|150954499|gb|ABR76529.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238546448|dbj|BAH62799.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|328538309|gb|EGF64448.1| dTMP kinase [Klebsiella sp. MS 92-3]
          Length = 213

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   L+   LQ    +D+  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTILAEKLRSLVLDIQSTGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  P+ T+ LD+  ++GL+R + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              P     VD+     +VA +I   + + + ++ +
Sbjct: 179 AADPS-IRTVDATQPLDAVARDIRATIAQWMAEQAA 213


>gi|42779109|ref|NP_976356.1| thymidylate kinase [Bacillus cereus ATCC 10987]
 gi|59798342|sp|Q73FH8|KTHY_BACC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|42735024|gb|AAS38964.1| thymidylate kinase [Bacillus cereus ATCC 10987]
          Length = 208

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDITFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              DR  +V++    + +   ++ ++ + +
Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207


>gi|299066795|emb|CBJ37989.1| thymidylate kinase [Ralstonia solanacearum CMR15]
          Length = 205

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + L+ +       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++   Q + P  T++ DL  ++   R+       ++   D FE +      + R  +L
Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A  +P R  IVD+A +   +  ++  ++  L
Sbjct: 173 RRAAAEPGRFVIVDAARARDDIRKDLEKLLASL 205


>gi|89074515|ref|ZP_01160987.1| putative thymidylate kinase [Photobacterium sp. SKA34]
 gi|89049619|gb|EAR55178.1| putative thymidylate kinase [Photobacterium sp. SKA34]
          Length = 209

 Score =  238 bits (609), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 117/214 (54%), Gaps = 9/214 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE- 61
           G FI  EG+EGAGK+T I  +   L +        TREPGGTP AE  R ++     DE 
Sbjct: 3   GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHAPASTREPGGTPLAEQMRALVKEGHPDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR+  V+NVI+PAL +G  ++ DR   SS AYQG         +++L+
Sbjct: 63  LTDMAELLLLYAARIQLVDNVIKPALNQGLWVVGDRHDMSSQAYQGGGRGFDRALMENLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI +D+  ++GL+R + R        LD  E+ ++    + R  FL+++
Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRARARFLELS 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            NQP+   IVD++ S + V  ++ + +   ++++
Sbjct: 177 ENQPN-VIIVDASQSLEKVTEDLQSALNAWLEQQ 209


>gi|77360743|ref|YP_340318.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125]
 gi|123588315|sp|Q3IHC1|KTHY_PSEHT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|76875654|emb|CAI86875.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125]
          Length = 208

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 7/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI  EG+EGAGK+T I+L + FL  K  D    REPGGTP AE+ R ++ +   +E 
Sbjct: 2   KPKFIVIEGLEGAGKSTAIALCQSFLNSKKIDFINVREPGGTPLAESLRTLVKAQHDEEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR   + NVI PAL +G+ +L DR   SS AYQG         L SL  
Sbjct: 62  AFETELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSS 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + ++ + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  +L++A 
Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELA- 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           N  +    VD+  S + V  +I N++     ++
Sbjct: 175 NDDNSIKTVDANQSIEHVHRDITNVLRTFFAEQ 207


>gi|91210252|ref|YP_540238.1| thymidylate kinase [Escherichia coli UTI89]
 gi|117623283|ref|YP_852196.1| thymidylate kinase [Escherichia coli APEC O1]
 gi|218557979|ref|YP_002390892.1| thymidylate kinase [Escherichia coli S88]
 gi|237706917|ref|ZP_04537398.1| thymidylate kinase [Escherichia sp. 3_2_53FAA]
 gi|331657160|ref|ZP_08358122.1| dTMP kinase [Escherichia coli TA206]
 gi|122424166|sp|Q1RD57|KTHY_ECOUT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221740|sp|A1A9Z2|KTHY_ECOK1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732656|sp|B7MJ85|KTHY_ECO45 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91071826|gb|ABE06707.1| thymidylate kinase [Escherichia coli UTI89]
 gi|115512407|gb|ABJ00482.1| thymidylate kinase [Escherichia coli APEC O1]
 gi|218364748|emb|CAR02438.1| thymidylate kinase [Escherichia coli S88]
 gi|226898127|gb|EEH84386.1| thymidylate kinase [Escherichia sp. 3_2_53FAA]
 gi|294493330|gb|ADE92086.1| thymidylate kinase [Escherichia coli IHE3034]
 gi|307627432|gb|ADN71736.1| thymidylate kinase [Escherichia coli UM146]
 gi|315287441|gb|EFU46852.1| thymidylate kinase [Escherichia coli MS 110-3]
 gi|315296640|gb|EFU55935.1| thymidylate kinase [Escherichia coli MS 16-3]
 gi|323953216|gb|EGB49082.1| thymidylate kinase [Escherichia coli H252]
 gi|323957922|gb|EGB53634.1| thymidylate kinase [Escherichia coli H263]
 gi|331055408|gb|EGI27417.1| dTMP kinase [Escherichia coli TA206]
          Length = 213

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  +    PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGGFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTNWVKE 210


>gi|332162101|ref|YP_004298678.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318606150|emb|CBY27648.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666331|gb|ADZ42975.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 212

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 113/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + E  PD T+ LDLP  IGL R + R        LD  E++ +   E+ R+ +L
Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A         +D++   + V+ +I  ++ + +  R
Sbjct: 174 KLAATDSS-IKTIDASQPLEQVSESISRVLKQWLTSR 209


>gi|206579513|ref|YP_002239283.1| thymidylate kinase [Klebsiella pneumoniae 342]
 gi|288936138|ref|YP_003440197.1| thymidylate kinase [Klebsiella variicola At-22]
 gi|290510808|ref|ZP_06550178.1| thymidylate kinase [Klebsiella sp. 1_1_55]
 gi|238057701|sp|B5XXH2|KTHY_KLEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|206568571|gb|ACI10347.1| thymidylate kinase [Klebsiella pneumoniae 342]
 gi|288890847|gb|ADC59165.1| thymidylate kinase [Klebsiella variicola At-22]
 gi|289777524|gb|EFD85522.1| thymidylate kinase [Klebsiella sp. 1_1_55]
          Length = 213

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 11/214 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   L+   LQ    +D+  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTVLAEKLRSLVLDIQSTGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  P+ T+ LD+  ++GL+R + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              P     VD+     +VA +I   + + + ++
Sbjct: 179 AADPS-IRTVDATQPLDAVARDIRATIAQWMAEQ 211


>gi|323144741|ref|ZP_08079318.1| dTMP kinase [Succinatimonas hippei YIT 12066]
 gi|322415492|gb|EFY06249.1| dTMP kinase [Succinatimonas hippei YIT 12066]
          Length = 205

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 123/211 (58%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           SGLFI+FEG EGAGK+T I  ++R+L+ K  D    REPGGT  AE  R +L +   +E 
Sbjct: 2   SGLFITFEGTEGAGKSTLIKEIERWLREKEIDFVSVREPGGTVLAEKMRAILKTPSPEEK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              ++E ++  AAR   VE +I+PAL +GK ++CDR   S+ AYQG         +D+++
Sbjct: 62  LCDKSELLLMYAARAQLVETLIKPALAQGKCVICDRHDLSTVAYQGGGRGLPMDEIDAVR 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +++ +  PD T++LD+   +G++R ++R        LD FE + +   E+ R+ +LD A
Sbjct: 122 NVALGKFRPDLTLLLDIDPKLGMQRARSR------GVLDRFELEQLSFFERVRKAYLDAA 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  P    ++D++ +   V    ++ + +L+
Sbjct: 176 KRLP-YIKVIDASKNVDEVRLAAISALEDLL 205


>gi|15643856|ref|NP_228905.1| thymidylate kinase [Thermotoga maritima MSB8]
 gi|8134526|sp|Q9X0I3|KTHY_THEMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|160286313|pdb|2Z0H|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|160286314|pdb|2Z0H|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|238828331|pdb|3HJN|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|238828332|pdb|3HJN|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With
           Dtdp And Adp From Thermotoga Maritima
 gi|4981644|gb|AAD36175.1|AE001769_5 thymidylate kinase [Thermotoga maritima MSB8]
          Length = 197

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 15/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL ++L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILL---EEEVTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R   V   I+  L EG  +L DR+ DSS AYQG   +     ++ L + +
Sbjct: 58  KAELFLFLASRNLLVTE-IKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  LKR            L+ FE++     E+ R+ +L +AR  
Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKR--EFLERVREGYLVLAREH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P+R  ++D   S + +  +++  V  
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVKR 191


>gi|52424624|ref|YP_087761.1| thymidylate kinase [Mannheimia succiniciproducens MBEL55E]
 gi|59798189|sp|Q65V34|KTHY_MANSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52306676|gb|AAU37176.1| Tmk protein [Mannheimia succiniciproducens MBEL55E]
          Length = 214

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 11/217 (5%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS 56
           MN    G FI  EG+EGAGKTT    +   L      D+  TREPGGTP AE  R+++  
Sbjct: 1   MNKNMNGKFIVLEGLEGAGKTTARQAVVEQLNALGITDLLFTREPGGTPLAEKLRNLIKY 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              +    +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         
Sbjct: 61  ETEEPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRQIDSHL 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L++  + +  PD T+ LDL   IGL R + R        LD  E++++   ++ R  
Sbjct: 121 LETLKKTVLGDFEPDFTLYLDLSPAIGLARARGR------GELDRIEQQNLAFFDRTRTR 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +L++ ++ P +  I+++  S + V  +I   V   V 
Sbjct: 175 YLELVKDNP-KAVIINAEQSIERVTADIKTAVKNWVN 210


>gi|86749796|ref|YP_486292.1| thymidylate kinase [Rhodopseudomonas palustris HaA2]
 gi|86572824|gb|ABD07381.1| thymidylate kinase [Rhodopseudomonas palustris HaA2]
          Length = 246

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 4/210 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I LL + L++   +  VTREPGG+P AE  RH+LL+      G
Sbjct: 13  GHFITFEGGEGAGKSTQIRLLAQRLEKAGLETLVTREPGGSPGAEIIRHLLLAGVGRAIG 72

Query: 64  -AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AEAEA++FAAAR DHV  +I+PAL  G  +LCDRF DS+  YQG         L++LQ+
Sbjct: 73  GAEAEALLFAAARDDHVRTLIQPALDRGVWVLCDRFYDSTRVYQGRLGDVSPGMLNALQD 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++  + PD T+ILD+PV+IGL R   R   R S   D FE +++  H + R  +  IAR
Sbjct: 133 VTIGTMKPDLTVILDVPVEIGLARAAVR---RGSDAPDRFESENIDFHRRLRDAYRQIAR 189

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+RC +VD+    + VA  I   V E +
Sbjct: 190 AEPERCVLVDAHAEPKVVADRIWLTVQERL 219


>gi|294676800|ref|YP_003577415.1| thymidylate kinase [Rhodobacter capsulatus SB 1003]
 gi|294475620|gb|ADE85008.1| thymidylate kinase [Rhodobacter capsulatus SB 1003]
          Length = 206

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 6/211 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T   LL   L     DV  TREPGG+P AE  R ++L    D + A
Sbjct: 1   MFITFEGIDGSGKSTQARLLAEALAGLGRDVIRTREPGGSPGAEEIRALVLQGDPDRWSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E ++F AAR DH+E  I PAL  G++++CDRF DS+  YQG         +D L  + 
Sbjct: 61  KTEILLFTAARRDHLERTIAPALAAGQVVICDRFADSTRMYQGLSRGDLRGLVDDLHRLM 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    PD T ++D+   +GL R + R    E      FE   + +  + R  FL +++  
Sbjct: 121 IGR-EPDLTFLIDIDPAVGLARAKGRQGHEE-----RFEDMGLAMQVRMRAGFLALSQEF 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             R  +++      +VA  +L++    ++ R
Sbjct: 175 SSRFKVIEGDRRPDAVAAEVLDVTLAALRAR 205


>gi|262043203|ref|ZP_06016339.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259039481|gb|EEW40616.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 213

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   L+   LQ    +D+  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARQLVVETLQSAGIHDLVFTREPGGTILAEKLRSLVLDIQSTGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  P+ T+ LD+  ++GL+R + R        LD  E++ +    + R  +L++A
Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              P     VD+     +VA +I   + + + ++ +
Sbjct: 179 AADPS-IRTVDATQPLDAVARDIRATIAQWMAEQAA 213


>gi|113475256|ref|YP_721317.1| thymidylate kinase [Trichodesmium erythraeum IMS101]
 gi|123352459|sp|Q115I0|KTHY_TRIEI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110166304|gb|ABG50844.1| thymidylate kinase [Trichodesmium erythraeum IMS101]
          Length = 225

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 22/212 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKN-------------YDVHVTREPGGTPAAEAA 50
           G FI FEG+EG GKTT I LL+ +L                  +V +TREPGGT   +A 
Sbjct: 3   GKFIVFEGVEGGGKTTQIELLQDWLLETGESRQILPKSIDLDLEVVITREPGGTKLGKAL 62

Query: 51  RHVLLSCG--VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
           R +LLS     ++    +E +++AA R  H+E +I+P L  G I+LCDRF+DS+ AYQG 
Sbjct: 63  RELLLSPDVLAEKIQETSELLLYAADRAQHIEALIKPCLERGTIVLCDRFIDSTIAYQGY 122

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
                   +  L  I+   +  D T  LD+ V+IGL R ++R +       D  E+ ++ 
Sbjct: 123 GRGLDVELIKQLNYIATGGLKSDLTFWLDIDVEIGLARAKSRGNF------DRMEQANIE 176

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
            H + +Q + ++A+N       +D+  + + V
Sbjct: 177 FHRRVQQGYQELAKNNSL-IVRIDANLTREKV 207


>gi|295397256|ref|ZP_06807352.1| thymidylate kinase [Aerococcus viridans ATCC 11563]
 gi|294974503|gb|EFG50234.1| thymidylate kinase [Aerococcus viridans ATCC 11563]
          Length = 219

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 4/208 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI+ EG +GAGKTT I  L   L+ K    + +TREPGG P AE  R V+LS     
Sbjct: 7   AGKFITVEGPDGAGKTTLIQGLTAKLEEKLAVPLKLTREPGGDPIAEQIREVILSPENVA 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA+R  H+ + + PAL  G ++LCDRF+DSS AYQG         + ++ 
Sbjct: 67  LDPRAEALLYAASRRQHLVHTVLPALEAGHMVLCDRFVDSSIAYQGYGREIGEEGIIAIN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +     PD T+ LD+  + G++R+Q   S  E    +  + + +  H++  + +  + 
Sbjct: 127 QFATDGRQPDLTLYLDITAEEGIRRIQANRSQAEQ---NRLDVEAIDFHQRVHKGYGVLK 183

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
              P+R  ++D+    +S+  + L I+ 
Sbjct: 184 DRFPERIQVIDATQDPESMQRDALAILE 211


>gi|83858301|ref|ZP_00951823.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633]
 gi|83853124|gb|EAP90976.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633]
          Length = 211

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EGAGKTT    L   L+ +     +TREPGGTP AEA R++L+    +
Sbjct: 1   MTQGRFITLEGGEGAGKTTLAKALSESLESQGVRTLITREPGGTPNAEALRNLLVEGDTE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A +E ++  AAR+DHVE +IRP+L +G  ++CDRF DS+ AYQG         +D +
Sbjct: 61  RWSALSETLLLYAARVDHVERLIRPSLDQGIWVICDRFSDSTRAYQGAAGGMSTAQIDEI 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              S+    PD T ++DL  + GL+R + R           FERK    H   R  FLDI
Sbjct: 121 DRASMHGFGPDLTFVVDLDPETGLERTRLR-----GEGATRFERKPAAFHHALRVAFLDI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           AR  P+RC ++D A     VAT+   I+ + +
Sbjct: 176 ARAAPERCVVLDGAMPADQVATSAFEILTQRL 207


>gi|269102268|ref|ZP_06154965.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162166|gb|EEZ40662.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 209

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 120/217 (55%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN G FI  EG+EGAGK+T IS +   L     +D   TREPGGTP AE  R ++     
Sbjct: 1   MN-GKFIVIEGLEGAGKSTAISQVINVLAEHGIHDPVATREPGGTPLAEQMRALVKEGHP 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE     AE ++  AAR+  V+NVI+PAL +G+ ++ DR   SS AYQG     +   + 
Sbjct: 60  DEPLTDMAELLLLYAARIQLVDNVIKPALAQGRWVVGDRHDMSSQAYQGGGRGFEQQLMM 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L+   + +  PD TI +D+   +GL+R + R        LD  E+ ++    + R  FL
Sbjct: 120 NLRNTVLGDFCPDFTIYMDIDPALGLQRARGR------GALDRIEQMNIDFFHRARARFL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +++   P+   I+D++ S ++V  +I + + + ++++
Sbjct: 174 ELSEQDPNT-VIIDASQSLEAVTADISSALTQWLEQQ 209


>gi|261403890|ref|YP_003240131.1| thymidylate kinase [Paenibacillus sp. Y412MC10]
 gi|261280353|gb|ACX62324.1| thymidylate kinase [Paenibacillus sp. Y412MC10]
          Length = 214

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 6/216 (2%)

Query: 1   MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN    LFI+ EG EG+GKTT +  L  F+Q  +    +TREPGG   AE  R ++L   
Sbjct: 1   MNNRRPLFITVEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIDIAEKIRSIILDPE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                A  EA+++AAAR  H+   + PAL +G  +LCDRF+DSS  YQG         + 
Sbjct: 61  HTAMDARTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVW 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           S+ + ++   MPD T++ D+   IGL R+            +  + +++  HEK R+ +L
Sbjct: 121 SINQFAIDTRMPDLTLLFDIEPRIGLSRIAANAE----REWNRLDMENLTFHEKVREGYL 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A   PDR  IVD++ +   V   +   + + + K
Sbjct: 177 LVAERNPDRIRIVDASKTPAQVEREMNRHLEDAILK 212


>gi|167738165|ref|ZP_02410939.1| thymidylate kinase [Burkholderia pseudomallei 14]
 gi|167815351|ref|ZP_02447031.1| thymidylate kinase [Burkholderia pseudomallei 91]
 gi|167893848|ref|ZP_02481250.1| thymidylate kinase [Burkholderia pseudomallei 7894]
 gi|167902298|ref|ZP_02489503.1| thymidylate kinase [Burkholderia pseudomallei NCTC 13177]
 gi|167910539|ref|ZP_02497630.1| thymidylate kinase [Burkholderia pseudomallei 112]
 gi|167918566|ref|ZP_02505657.1| thymidylate kinase [Burkholderia pseudomallei BCC215]
 gi|254179465|ref|ZP_04886064.1| thymidylate kinase [Burkholderia pseudomallei 1655]
 gi|254297346|ref|ZP_04964799.1| thymidylate kinase [Burkholderia pseudomallei 406e]
 gi|157807497|gb|EDO84667.1| thymidylate kinase [Burkholderia pseudomallei 406e]
 gi|184210005|gb|EDU07048.1| thymidylate kinase [Burkholderia pseudomallei 1655]
          Length = 206

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 13/215 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56
           M  G FI+FEGI+GAGKTTH+      LQ +       V VTREPGGT   E  R +LL+
Sbjct: 1   MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E EA++  A R +H+  VI PAL  G  ++ DRF D+++AYQG         
Sbjct: 61  Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++L+        PD T++ D+   +   R         +   D FE +      + R  
Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASARRGA------ARMPDKFESESDAFFARTRAE 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +L  A   P R  IVDS+ S   +   +  ++  L
Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKRLEGVLAAL 206


>gi|162446997|ref|YP_001620129.1| thymidylate kinase [Acholeplasma laidlawii PG-8A]
 gi|189028826|sp|A9NEH3|KTHY_ACHLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|161985104|gb|ABX80753.1| thymidylate kinase [Acholeplasma laidlawii PG-8A]
          Length = 201

 Score =  238 bits (608), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 7/208 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG+GKTT I  LK  L  K YDV  TREPGG+  AE  R VLL     E  A
Sbjct: 1   MFITFEGGEGSGKTTLIEKLKHTLLEKKYDVLTTREPGGSKVAEKIRSVLLDNKNTEITA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA+R  H++ VI P L   K++LCDR++DSSYAYQ    +    F+ S+   +
Sbjct: 61  HTEALLFAASRAQHLDEVIIPNLD--KVILCDRYIDSSYAYQAFGRNLGMEFVQSINSYA 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++ + PD T  +DL    G+ RV+     +     D  + +    H+K R+ ++ I+   
Sbjct: 119 LKYL-PDLTFYIDLDPKTGIDRVKKNRLHK----TDRLDMEVQTFHQKVREGYIRISEMF 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
            +R  ++D   S  ++   I++ + + +
Sbjct: 174 KERIVVIDGNQSIDAIYQIIMDNILKRL 201


>gi|225351239|ref|ZP_03742262.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158695|gb|EEG71937.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 219

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 12/215 (5%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---S 56
           MN  G+FISFEG++G GKTT +  L+ +++ +  +  VTREPGGT    A R +LL    
Sbjct: 1   MNMQGIFISFEGVDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLGGVE 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +    AEA++FAA R  HV  VIRPAL  G +++ DR+LDSS AYQ          
Sbjct: 61  GSDADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQAGGRELTAGE 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L   +  E++P+ T +LDL       R+Q+          D  E        + RQ 
Sbjct: 121 IRDLSMWATCELLPNRTYLLDLDPVQSHARLQH--------DEDRMESAGNDFQRRTRQA 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           FLD+A+ +  R  ++D++ S   V ++I +   ++
Sbjct: 173 FLDLAKAESQRFRVIDASQSIDEVWSHIQDDFAQI 207


>gi|217967176|ref|YP_002352682.1| dTMP kinase [Dictyoglomus turgidum DSM 6724]
 gi|217336275|gb|ACK42068.1| dTMP kinase [Dictyoglomus turgidum DSM 6724]
          Length = 207

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 11/210 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + LFI+FEGI+G+GKTT   LLK   + K Y VH+TREPGGT      R +LL+    
Sbjct: 1   MKNNLFITFEGIDGSGKTTQALLLKEHFESKGYKVHLTREPGGTDVGNKIREILLNPAFS 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA ++ A+R+++  N+I+  L E  +++C+R+ DS+ AYQG   +     L  +
Sbjct: 61  -INYWTEAFLYLASRVENTINIIK-KLKENYVVICERYADSTLAYQGYGRNLPLELLVEM 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+   + P+ TI++DL  ++ L+R +           D  ER+++  + K R+ +L+I
Sbjct: 119 NQIATFGLKPNLTILIDLDPELALRRKK---------SFDRIERENIEFYYKVRKGYLEI 169

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+ + +R  I+    S   +   I+  +  
Sbjct: 170 AKKEKERFIIIPGDLSKGEIFKRIVEEIER 199


>gi|255017566|ref|ZP_05289692.1| thymidylate kinase [Listeria monocytogenes FSL F2-515]
          Length = 208

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKNEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  +
Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               P+R   VD+  + + +   IL  +   +
Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207


>gi|187928511|ref|YP_001898998.1| thymidylate kinase [Ralstonia pickettii 12J]
 gi|229470189|sp|B2UBZ3|KTHY_RALPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187725401|gb|ACD26566.1| dTMP kinase [Ralstonia pickettii 12J]
          Length = 205

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + LQ K       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A+R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFASRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L+    Q + P  TI+ DL  +I   R+       ++   D FE +      + R  +L
Sbjct: 119 ALEHWVQQGLQPTKTILFDLAPEIAAARLA------DARTPDKFEAESAQFFLRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A  +PDR  ++++      +  ++ N++  L
Sbjct: 173 RRAAAEPDRFVVLNANRERSDIQKDLENLLATL 205


>gi|212716794|ref|ZP_03324922.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660498|gb|EEB21073.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM
           16992]
          Length = 217

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 11/212 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---SCGV 59
            G+FISFEGI+G GKTT +  L+ +++ +  +  VTREPGGT    A R +LL       
Sbjct: 2   QGIFISFEGIDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLGGVEGSD 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    AEA++FAA R  HV  VIRPAL  G +++ DR+LDSS AYQ          +  
Sbjct: 62  ADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQAGGRELTAGEIRD 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   +  E++P+ T +LDL       R+Q+          D  E        + RQ FLD
Sbjct: 122 LSMWATCELLPNRTYLLDLDPVQSHARLQH--------DEDRMESAGNDFQRRTRQAFLD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +A+ +  R  ++D++ S   V ++I +   ++
Sbjct: 174 LAKAESQRFRVIDASQSIDEVWSHIQDDFAQI 205


>gi|328543898|ref|YP_004304007.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1]
 gi|326413642|gb|ADZ70705.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1]
          Length = 231

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 2/195 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T I  L   L     DV VTREPGG+P AE  R +LLS G    
Sbjct: 2   QGRFITFEGGEGAGKSTQIRRLHDRLAALGIDVVVTREPGGSPGAEFIRDLLLSGGARGL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   EA++FAAAR DHV+  IRPAL  GK +LCDRF DS+  YQGE        L  L+ 
Sbjct: 62  GPRGEAMLFAAARADHVDATIRPALEAGKWVLCDRFADSTRVYQGEA-GVDAHLLGLLET 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQIFLDIA 181
            +  ++ PD T+++D+P D+GLKRV  R     +    D FE + + +HE+RR +FL++A
Sbjct: 121 AATLDLRPDLTVLIDVPADVGLKRVAARSRNAGADRGPDRFEDEALGVHERRRALFLELA 180

Query: 182 RNQPDRCHIVDSAHS 196
           R++P+R  IVD +  
Sbjct: 181 RDEPERIRIVDGSGD 195


>gi|54294285|ref|YP_126700.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens]
 gi|81601377|sp|Q5WWU9|KTHY_LEGPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53754117|emb|CAH15590.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens]
 gi|307610103|emb|CBW99644.1| hypothetical protein LPW_14121 [Legionella pneumophila 130b]
          Length = 212

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 8/215 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL  G+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              ++   PD T+ LD+  ++G+ R ++R         D  E++ +    +    +  + 
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHILV 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +  P+   ++D+  S + V ++I +++ E ++  +
Sbjct: 179 KQNPE-IMMIDANRSLEEVQSSIQSVIEEFIEHNL 212


>gi|15923472|ref|NP_371006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926159|ref|NP_373692.1| thymidylate kinase [Staphylococcus aureus subsp. aureus N315]
 gi|49482709|ref|YP_039933.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|57651363|ref|YP_185412.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL]
 gi|82750189|ref|YP_415930.1| thymidylate kinase [Staphylococcus aureus RF122]
 gi|87162349|ref|YP_493168.1| thymidylate kinase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194238|ref|YP_499030.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|148266940|ref|YP_001245883.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH9]
 gi|150392986|ref|YP_001315661.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1]
 gi|156978810|ref|YP_001441069.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu3]
 gi|221142326|ref|ZP_03566819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315924|ref|ZP_04839137.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253730948|ref|ZP_04865113.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|255005275|ref|ZP_05143876.2| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|262049967|ref|ZP_06022826.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30]
 gi|262052513|ref|ZP_06024710.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3]
 gi|269202101|ref|YP_003281370.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98]
 gi|284023491|ref|ZP_06377889.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 132]
 gi|294850341|ref|ZP_06791074.1| thymidylate kinase [Staphylococcus aureus A9754]
 gi|295407370|ref|ZP_06817167.1| thymidylate kinase [Staphylococcus aureus A8819]
 gi|295427016|ref|ZP_06819653.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|296276563|ref|ZP_06859070.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246450|ref|ZP_06930290.1| thymidylate kinase [Staphylococcus aureus A8796]
 gi|54037703|sp|P65249|KTHY_STAAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|54041417|sp|P65248|KTHY_STAAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56749045|sp|Q6GJI9|KTHY_STAAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920829|sp|Q5HIJ5|KTHY_STAAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122540513|sp|Q2G230|KTHY_STAA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123487157|sp|Q2FJG0|KTHY_STAA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123548600|sp|Q2YVW3|KTHY_STAAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166223118|sp|A7WYM2|KTHY_STAA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030842|sp|A6TYV6|KTHY_STAA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030843|sp|A5IQ34|KTHY_STAA9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|93279034|pdb|2CCJ|A Chain A, Crystal Structure Of S. Aureus Thymidylate Kinase
           Complexed With Thymidine Monophosphate
 gi|93279035|pdb|2CCJ|B Chain B, Crystal Structure Of S. Aureus Thymidylate Kinase
           Complexed With Thymidine Monophosphate
 gi|93279036|pdb|2CCK|A Chain A, Crystal Structure Of Unliganded S. Aureus Thymidylate
           Kinase
 gi|93279037|pdb|2CCK|B Chain B, Crystal Structure Of Unliganded S. Aureus Thymidylate
           Kinase
 gi|13700372|dbj|BAB41670.1| tmk [Staphylococcus aureus subsp. aureus N315]
 gi|14246250|dbj|BAB56644.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|49240838|emb|CAG39505.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|57285549|gb|AAW37643.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL]
 gi|82655720|emb|CAI80119.1| thymidylate kinase [Staphylococcus aureus RF122]
 gi|87128323|gb|ABD22837.1| thymidylate kinase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201796|gb|ABD29606.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147740009|gb|ABQ48307.1| thymidylate kinase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945438|gb|ABR51374.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1]
 gi|156720945|dbj|BAF77362.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253725298|gb|EES94027.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|259159560|gb|EEW44607.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3]
 gi|259161902|gb|EEW46485.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30]
 gi|262074391|gb|ACY10364.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98]
 gi|269940053|emb|CBI48429.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|283469774|emb|CAQ48985.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ST398]
 gi|285816181|gb|ADC36668.1| Thymidylate kinase [Staphylococcus aureus 04-02981]
 gi|294822765|gb|EFG39201.1| thymidylate kinase [Staphylococcus aureus A9754]
 gi|294967727|gb|EFG43759.1| thymidylate kinase [Staphylococcus aureus A8819]
 gi|295129019|gb|EFG58648.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297176637|gb|EFH35899.1| thymidylate kinase [Staphylococcus aureus A8796]
 gi|298693811|gb|ADI97033.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED133]
 gi|302750372|gb|ADL64549.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|312828977|emb|CBX33819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128606|gb|EFT84609.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315193841|gb|EFU24235.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315196161|gb|EFU26517.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS01]
 gi|323438403|gb|EGA96161.1| thymidylate kinase [Staphylococcus aureus O11]
 gi|323441265|gb|EGA98936.1| thymidylate kinase [Staphylococcus aureus O46]
 gi|329313200|gb|AEB87613.1| Thymidylate kinase [Staphylococcus aureus subsp. aureus T0131]
 gi|329725071|gb|EGG61566.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21172]
 gi|329729774|gb|EGG66171.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21189]
 gi|329731077|gb|EGG67449.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21193]
          Length = 205

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I+ +   L  K+YDV +TREPGG P  E  R ++L    ++    
Sbjct: 4   FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL EGK++LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI L++  ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+ 
Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   V++    ++V  +    + + ++K
Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204


>gi|94970254|ref|YP_592302.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345]
 gi|94552304|gb|ABF42228.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345]
          Length = 217

 Score =  238 bits (608), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 2/212 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F++FEG++G GK+T + +L   L+R   DV  TREPGGTP  E  R V+L       
Sbjct: 5   RGKFLTFEGLDGCGKSTQMEMLAEVLRRDGIDVVTTREPGGTPTGEKIRSVILDSKTRFL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  AAR  H+  +++P+L  G+ +LCDRF DSS AYQG         +  + +
Sbjct: 65  HPMAELALMFAARAQHIAEIVQPSLEAGRWVLCDRFTDSSEAYQGGGRQMGSQLILDMHK 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDI 180
           I   ++ P+ TI++D   +  + R + R     +  +D   FER+ +   ++ R  +  I
Sbjct: 125 IVCGDLWPEMTILMDSDPEASVARARRRNRANATDGVDENRFEREKIEFFQRVRDAYNAI 184

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +P R + VD+  S       I+  V E +
Sbjct: 185 ADREPQRVYKVDARRSKDVTHPEIVRAVRERM 216


>gi|237731030|ref|ZP_04561511.1| thymidylate kinase [Citrobacter sp. 30_2]
 gi|226906569|gb|EEH92487.1| thymidylate kinase [Citrobacter sp. 30_2]
          Length = 213

 Score =  238 bits (607), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAKGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                    +D+    ++V  +I + + + V+++ +
Sbjct: 179 AKDTS-IRTIDATQPLEAVMADIRHTITQWVKEQGA 213


>gi|116333253|ref|YP_794780.1| thymidylate kinase [Lactobacillus brevis ATCC 367]
 gi|122270059|sp|Q03SS3|KTHY_LACBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116098600|gb|ABJ63749.1| thymidylate kinase [Lactobacillus brevis ATCC 367]
          Length = 214

 Score =  238 bits (607), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FISFEG +GAGKT+ +  +   ++      + +TREPGG P +E+ R ++L      
Sbjct: 2   SGTFISFEGPDGAGKTSALQAITTQIKPVLGDQLVITREPGGNPISESIRAIILDRANTA 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AAAR  H+   I PAL   K++LCDR++DSS AYQG         +  + 
Sbjct: 62  MDYRTEALLYAAARRQHLAQTILPALAADKLVLCDRYVDSSVAYQGAGRQIGEDAVAQMN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P  T+  D+P +IGL+R+Q     R+   +D  + +    H++ R  +L + 
Sbjct: 122 TFATDGLLPAVTVYFDVPAEIGLRRIQA---HRDPQKVDRLDVEQAAFHDRVRAAYLRLQ 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              PDR  ++D+    ++V T  L ++ +  Q
Sbjct: 179 AAHPDRIKLIDATQKREAVVTTALTLIKQAAQ 210


>gi|255262414|ref|ZP_05341756.1| thymidylate kinase [Thalassiobium sp. R2A62]
 gi|255104749|gb|EET47423.1| thymidylate kinase [Thalassiobium sp. R2A62]
          Length = 208

 Score =  238 bits (607), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 9/209 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEGI+G+GK+T   +L   L        +TREPGG+  AE  R +LLS   D + 
Sbjct: 5   GHFITFEGIDGSGKSTQARMLVDRL---GAQTLLTREPGGSEGAEEIRGLLLSGDTDRWS 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE E ++F AAR DH+E  I PAL  G  ++ DRF DS+  YQG         +D L  +
Sbjct: 62  AETEILLFTAARRDHLEKTIEPALAAGTTVISDRFADSTRVYQGATRGDLRATVDQLHTL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T I+D+   I LKR   R +       D FE   +   E  R  FL +AR+
Sbjct: 122 MI-GREPDLTFIIDMDPAIALKRGLARET-----GEDRFEDFGLAFQETLRHGFLALARD 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+RC ++D   + + VA+ +     + +
Sbjct: 176 MPNRCVVIDGNRTPEQVASEVAAHAMDAL 204


>gi|52841629|ref|YP_095428.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|59798153|sp|Q5ZVP1|KTHY_LEGPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|52628740|gb|AAU27481.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 212

 Score =  238 bits (607), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 8/215 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL  G+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              ++   PD T+ LD+  ++G+ R ++R         D  E++ +    +    +  + 
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHILV 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +  P+   ++D+  S + V ++I +++ E ++  +
Sbjct: 179 KQNPE-IIMIDANRSLEEVQSSIQSVIEEFIEHNL 212


>gi|227111684|ref|ZP_03825340.1| thymidylate kinase [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 219

 Score =  238 bits (607), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT  +++   L+     DV  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGIA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  V+NVI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R + R        LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRSRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
           ++A    D    +D++    +V+ +I
Sbjct: 174 ELAAED-DSILTIDASQPIDAVSADI 198


>gi|26247240|ref|NP_753280.1| thymidylate kinase [Escherichia coli CFT073]
 gi|227886546|ref|ZP_04004351.1| thymidylate kinase [Escherichia coli 83972]
 gi|300974436|ref|ZP_07172613.1| thymidylate kinase [Escherichia coli MS 45-1]
 gi|301051116|ref|ZP_07197949.1| thymidylate kinase [Escherichia coli MS 185-1]
 gi|31563157|sp|Q8FIN9|KTHY_ECOL6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|26107641|gb|AAN79840.1|AE016759_114 Thymidylate kinase [Escherichia coli CFT073]
 gi|227836750|gb|EEJ47216.1| thymidylate kinase [Escherichia coli 83972]
 gi|300297242|gb|EFJ53627.1| thymidylate kinase [Escherichia coli MS 185-1]
 gi|300410570|gb|EFJ94108.1| thymidylate kinase [Escherichia coli MS 45-1]
 gi|307553099|gb|ADN45874.1| thymidylate kinase [Escherichia coli ABU 83972]
 gi|315291041|gb|EFU50404.1| thymidylate kinase [Escherichia coli MS 153-1]
          Length = 213

 Score =  238 bits (607), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  +  V PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGGVRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTNWVKE 210


>gi|323340134|ref|ZP_08080398.1| dTMP kinase [Lactobacillus ruminis ATCC 25644]
 gi|323092325|gb|EFZ34933.1| dTMP kinase [Lactobacillus ruminis ATCC 25644]
          Length = 210

 Score =  238 bits (607), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 5/207 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +FI+FEG +G+GKT+ I  + + L++    +  +TREPGG   +EA R+V+L     E  
Sbjct: 1   MFITFEGTDGSGKTSVIKAIVKELEKNGKTEYVLTREPGGNRISEAIRNVILDERFVEMD 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+++AAAR  H+   I PAL  GK++LCDRF+DSS  YQG   S     +  +   
Sbjct: 61  ERTEALLYAAARRQHIVETINPALSAGKLVLCDRFVDSSIVYQGAGRSIGTDRIAEMNRF 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   + PD TI LD+  ++GL+R++ R    E   ++  + + +  +      +L++A  
Sbjct: 121 ATDGLTPDLTIFLDIEPELGLERIR-RNRQDE---VNRLDHEKMSFYRTVHDAYLELATK 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
              R   VD++   ++V   +  I+ +
Sbjct: 177 DSKRIVEVDASQPLEAVIFEVREILKK 203


>gi|114565616|ref|YP_752770.1| dTMP kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114336551|gb|ABI67399.1| thymidylate kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 210

 Score =  238 bits (607), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 9/214 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GLFIS EGI+G GKT+    L ++  +  + V   REPGGT  +E  R +LL     E
Sbjct: 3   NKGLFISLEGIDGCGKTSVKEGLLQYFSK--FPVLSIREPGGTLISEKIREILLDEKNQE 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA ++AAAR   VE +IRPAL++GKI+L DR+LDS+ AYQG        FL +L 
Sbjct: 61  ITARTEAFLYAAARSQLVEELIRPALLQGKIVLADRYLDSTIAYQGYGRGLDLGFLTTLN 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++    + P  T++LD+    G +R +           D  E++ +    + R+ +L IA
Sbjct: 121 QLCTSGLKPHLTLLLDIDPAEGQRRKKK-------DIPDRLEKEGIEFQSRVREGYLKIA 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           R + +R  ++D+   F+ V    +  + ++   R
Sbjct: 174 RQESERIKLLDAGKDFKEVLQEAIEYIEDIWPAR 207


>gi|170768049|ref|ZP_02902502.1| thymidylate kinase [Escherichia albertii TW07627]
 gi|170122815|gb|EDS91746.1| thymidylate kinase [Escherichia albertii TW07627]
          Length = 213

 Score =  238 bits (607), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++   +D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +L++A       H +D+     +V   I   V   V+++ +
Sbjct: 174 YLELAAQD-RSIHTIDATQPLDAVMDAIRTTVTNWVKEQGA 213


>gi|50365491|ref|YP_053916.1| thymidylate kinase [Mesoplasma florum L1]
 gi|59798247|sp|Q6F0E1|KTHY_MESFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|50364047|gb|AAT76032.1| thymidylate kinase [Mesoplasma florum L1]
          Length = 211

 Score =  237 bits (606), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 65/209 (31%), Positives = 118/209 (56%), Gaps = 5/209 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG++G+GKTT +  +K++L+  NY V +TREPGG P +E  R ++L+        
Sbjct: 1   MFITIEGMDGSGKTTALQRVKQYLEDLNYKVVMTREPGGLPLSEKIRELILNKDGVGMEP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++F AAR +H+E VI+P L +G I++ DRF+DS+ AYQG        +L+ LQ+  
Sbjct: 61  WTEALLFIAARKEHLEKVIKPYLKKGYIVISDRFMDSTTAYQGGARGLGVDYLNELQKNI 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++  +PD T+  +L  +   KR+  R   +     +  + +     E  +  F ++   +
Sbjct: 121 LEGFLPDLTLYFELSFEDAEKRLSARPEEK-----NRLDEEGRKFKEAVKLAFEELVVKE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           P+R  ++D++ S + V      ++ E ++
Sbjct: 176 PNRITVIDASKSPEEVFEETKKVILEKIE 204


>gi|301155188|emb|CBW14652.1| thymidylate kinase [Haemophilus parainfluenzae T3T1]
          Length = 210

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK+T +  +   L+     D+  TREPGGTP AE  RH++     + 
Sbjct: 2   QGKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETAEL 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PAL EGKI+L DR   SS AYQG         + +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + +  PD  + LD+    GL R + R        LD  E++ +    + RQ +L++ 
Sbjct: 122 NMVLGDFEPDFVLYLDIDPAEGLARARGR------GELDRIEQQGLDFFHRTRQRYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +N P +  I+++  +   V  +I + V   
Sbjct: 176 QNNP-KAAIINAGQALAQVQADIQSAVKSW 204


>gi|296102884|ref|YP_003613030.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057343|gb|ADF62081.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 213

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 114/219 (52%), Gaps = 12/219 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L+     D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVIETLKTLGVADMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  GK ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDQTM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++ +    + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESLDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L++A         +D+  S + V  +I   V   +Q++
Sbjct: 174 YLELASQDSS-IRTIDATQSLEEVTRSIEETVKHWLQEQ 211


>gi|116747846|ref|YP_844533.1| dTMP kinase [Syntrophobacter fumaroxidans MPOB]
 gi|116696910|gb|ABK16098.1| thymidylate kinase [Syntrophobacter fumaroxidans MPOB]
          Length = 222

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 5/208 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F++FEGI+G GK+T I  L  +L R       TREPGGT   E  R +LL         
Sbjct: 17  KFVTFEGIDGCGKSTLIDELASWLDRTRVPYVKTREPGGTSLGEKIRGLLLDPAHRGMNR 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E +++ A+R   V  +I PAL  G  +L DR++D++ AYQG         L  LQ  +
Sbjct: 77  QTEVLLYTASRAQLVAEIILPALKSGAWVLADRYIDATLAYQGYGRELDPDPLRRLQHWA 136

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q ++PD T++LD  +D    R+  R         D  E ++   HE+ +  +LD+A   
Sbjct: 137 TQALVPDKTVLLDCGIDTAAARMSARNH-----RPDRIEMEERAFHERVKAGYLDLASLD 191

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
           P R  ++D+      V  +      E+V
Sbjct: 192 PGRFIVLDAEKPLPEVIADFRAAFREIV 219


>gi|6729847|pdb|4TMK|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate
           Inhibitor Tp5a
 gi|6729850|pdb|5TMP|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate
           Inhibitor Aztp5a
          Length = 213

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R +LL    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|329942859|ref|ZP_08291638.1| thymidylate kinase [Chlamydophila psittaci Cal10]
 gi|313848031|emb|CBY17029.1| thymidylate kinase [Chlamydophila psittaci RD1]
 gi|325507234|gb|ADZ18872.1| thymidylate kinase [Chlamydophila psittaci 6BC]
 gi|328815119|gb|EGF85108.1| thymidylate kinase [Chlamydophila psittaci Cal10]
 gi|328914700|gb|AEB55533.1| thymidylate kinase [Chlamydophila psittaci 6BC]
          Length = 207

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +  +V  TREPGG+   E  R  +L     E   
Sbjct: 1   MFIVIEGCEGSGKSSLTQLLKDKLMAEGKEVVATREPGGSSLGERVRDWILDPSTTEISP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F AAR  H+   I PAL  GKI++CDRF DS+  YQG        ++ +L    
Sbjct: 61  YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V E  ++P+ T +LD+P D GLKR Q + S       D FE K +  H K R+ FL +A 
Sbjct: 121 VGEKKILPNLTCLLDIPADEGLKRKQQQKSF------DKFENKSLAYHTKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++PD   ++D+    +     ++    EL
Sbjct: 175 SRPDSYLVLDARQPIEESLNKVMTAYTEL 203


>gi|268589221|ref|ZP_06123442.1| dTMP kinase [Providencia rettgeri DSM 1131]
 gi|291315477|gb|EFE55930.1| dTMP kinase [Providencia rettgeri DSM 1131]
          Length = 209

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M +  FI  EG+EGAGKTT I+ +   L +    D+  TREPGGTP AE  R ++     
Sbjct: 1   MKN-QFIVIEGLEGAGKTTAINTVVETLNQAGITDIVFTREPGGTPLAEKLRELIKQGIA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+   +AE ++  AAR+  V+ VI+PAL  GK ++ DR   SS AYQG         + 
Sbjct: 60  GDKVTDKAELLMLYAARVQLVDTVIQPALAAGKWVVGDRHDLSSQAYQGGGREIDRHLMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+++ + +  P  T+ LDLP ++GL+R ++R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRDLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRSRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A    +    +D++ + + V  +I   + + + +
Sbjct: 174 ELAAGD-ETILTIDASQNIEQVQQDIRQTLTQWLAR 208


>gi|29840268|ref|NP_829374.1| thymidylate kinase [Chlamydophila caviae GPIC]
 gi|34222665|sp|Q823B7|KTHY_CHLCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|29834616|gb|AAP05252.1| thymidylate kinase [Chlamydophila caviae GPIC]
          Length = 207

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +   V  TREPGG+P  E  R ++L         
Sbjct: 1   MFIVIEGCEGSGKSSLTELLKDRLIAEGKAVVATREPGGSPLGERVRDLILEPSTPSISP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F AAR +H+   I PAL  G I++CDRF DS+  YQG  +     ++ SL    
Sbjct: 61  YTELFLFLAARAEHITKKIFPALESGNIVICDRFHDSTIVYQGIAEGLGKEYVTSLCHHV 120

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V E   +PD T +LD+P D GL+R Q + S      LD FE K +  H K R+ FL +A 
Sbjct: 121 VGEKKFLPDLTCLLDIPADEGLRRKQQQKS------LDKFEDKPLAYHTKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P+   I+D     +     ++    EL
Sbjct: 175 AHPNSYLILDGRQPLEESLNKVMTAYTEL 203


>gi|90579079|ref|ZP_01234889.1| putative thymidylate kinase [Vibrio angustum S14]
 gi|90439912|gb|EAS65093.1| putative thymidylate kinase [Vibrio angustum S14]
          Length = 209

 Score =  237 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 117/212 (55%), Gaps = 9/212 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           G FI  EG+EGAGK+T I  +   L +   +D   TREPGGTP AE  R ++     DE 
Sbjct: 3   GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHDPASTREPGGTPLAEQMRALVKEGHPDEP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++  AAR+  V+NVI+PAL +G+ ++ DR   SS AYQG         +++L+
Sbjct: 63  LTDMAELLLLYAARIQLVDNVIKPALNQGQWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI +D+  ++GL+R + R        LD  E+ +V    + R  FL+++
Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNVDFFHRARARFLELS 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            NQP+   I+D++ S   V  ++ + +   ++
Sbjct: 177 ENQPN-VIIIDASQSLDKVTEDLQSALNAWLE 207


>gi|329297193|ref|ZP_08254529.1| thymidylate kinase [Plautia stali symbiont]
          Length = 211

 Score =  237 bits (606), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 10/219 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M S  FI  EG+EGAGKTT    +   L  +   DV  TREPGGTP AE  R ++     
Sbjct: 1   MKS-KFIVIEGLEGAGKTTAREAVVAVLHEQGIEDVVFTREPGGTPLAEQLRVLVKQGID 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEKVSDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGCGRGLDTQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  + +  PD T+ LD+  +IGL+R + R        LD  E++ +    + R+ + 
Sbjct: 120 TLRDAVLGDFRPDLTLYLDVTPEIGLQRARAR------GELDRIEQESLNFFTRTRERYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +A   P     +D+    + V  ++  ++ + +  + +
Sbjct: 174 ALAAADP-TIKTIDATQPIEDVTVSLKAVLRQWLAGQAA 211


>gi|254733599|ref|ZP_05191318.1| thymidylate kinase [Bacillus anthracis str. Western North America
           USA6153]
          Length = 207

 Score =  237 bits (606), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 4/208 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++ EG EG+GKTT I  L  + ++K   V  TREPGG   +E  R +L        
Sbjct: 2   KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AAAR  H+   + PAL E  ++LCDRF+DSS AYQG         +  +  
Sbjct: 62  EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + ++ MP  TI LD+  ++GL R+           ++  + +D+  H++ R+ +L +  
Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
              DR  +V++    + +   ++ ++ +
Sbjct: 178 RFSDRIVLVNADPPMEKLIEEVIQVIED 205


>gi|317486321|ref|ZP_07945152.1| thymidylate kinase [Bilophila wadsworthia 3_1_6]
 gi|316922432|gb|EFV43687.1| thymidylate kinase [Bilophila wadsworthia 3_1_6]
          Length = 208

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 2/205 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEG+GKTT I  L    +  N++V VTREPGG       R +LL+   +    
Sbjct: 1   MFITLEGIEGSGKTTLIENLADVFRTLNHEVLVTREPGGCALGRELRQMLLNPETE-ICP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE  +F A R  HV  VIRPAL  G+++LCDR+ DS+  YQG         L SL +++
Sbjct: 60  EAELFLFLADRAQHVAEVIRPALKRGEVVLCDRYADSTVVYQGYGRGLDIEKLRSLNDVA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  + PD T +LD+     LKR + R   L  S     FE + +  H + R+ F   A +
Sbjct: 120 IGGLWPDRTFVLDMDPADALKRARRRNAELGLSEKEGRFEAEQMPFHTRIREGFKLWAAH 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
              R  ++D+A S + +    L  +
Sbjct: 180 NTKRIVVLDAADSPEGLMHQALANI 204


>gi|311106019|ref|YP_003978872.1| thymidylate kinase [Achromobacter xylosoxidans A8]
 gi|310760708|gb|ADP16157.1| thymidylate kinase [Achromobacter xylosoxidans A8]
          Length = 207

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 10/199 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG++GAGK+TH   +  FL+ +  DV  TREPGGTP  E  R +LL    D 
Sbjct: 3   TRGRFITLEGVDGAGKSTHTVWIADFLRAQGLDVVSTREPGGTPLGEKLRGLLL---TDP 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G + E ++  AAR +H+  VI PAL  G  ++CDR+ D++YAYQG         + +L+
Sbjct: 60  MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGASRVAALE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +       PD T + D+P+++   R+       ++   D FER+     E+ R+ +   A
Sbjct: 120 DWMQAG-QPDRTWLFDVPLEVARARLA------DAREPDRFEREGAAFFERTREAYHARA 172

Query: 182 RNQPDRCHIVDSAHSFQSV 200
                R  IVDS  S   +
Sbjct: 173 ATDQKRIRIVDSTQSIAQI 191


>gi|110641274|ref|YP_669004.1| thymidylate kinase [Escherichia coli 536]
 gi|191174621|ref|ZP_03036109.1| thymidylate kinase [Escherichia coli F11]
 gi|215486309|ref|YP_002328740.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69]
 gi|218704509|ref|YP_002412028.1| thymidylate kinase [Escherichia coli UMN026]
 gi|293404386|ref|ZP_06648380.1| tmk [Escherichia coli FVEC1412]
 gi|293409463|ref|ZP_06653039.1| thymidylate kinase [Escherichia coli B354]
 gi|298380163|ref|ZP_06989768.1| dTMP kinase [Escherichia coli FVEC1302]
 gi|300896858|ref|ZP_07115350.1| thymidylate kinase [Escherichia coli MS 198-1]
 gi|300982521|ref|ZP_07176171.1| thymidylate kinase [Escherichia coli MS 200-1]
 gi|306814053|ref|ZP_07448226.1| thymidylate kinase [Escherichia coli NC101]
 gi|312968825|ref|ZP_07783032.1| thymidylate kinase [Escherichia coli 2362-75]
 gi|331646355|ref|ZP_08347458.1| dTMP kinase [Escherichia coli M605]
 gi|331662506|ref|ZP_08363429.1| dTMP kinase [Escherichia coli TA143]
 gi|331682603|ref|ZP_08383222.1| dTMP kinase [Escherichia coli H299]
 gi|122958415|sp|Q0TIX6|KTHY_ECOL5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732659|sp|B7NAX6|KTHY_ECOLU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808290|sp|B7UPB4|KTHY_ECO27 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|110342866|gb|ABG69103.1| thymidylate kinase [Escherichia coli 536]
 gi|190905100|gb|EDV64751.1| thymidylate kinase [Escherichia coli F11]
 gi|215264381|emb|CAS08738.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69]
 gi|218431606|emb|CAR12485.1| thymidylate kinase [Escherichia coli UMN026]
 gi|222032851|emb|CAP75590.1| Thymidylate kinase [Escherichia coli LF82]
 gi|281178207|dbj|BAI54537.1| thymidylate kinase [Escherichia coli SE15]
 gi|284920923|emb|CBG33986.1| Thymidylate kinase [Escherichia coli 042]
 gi|291428972|gb|EFF01997.1| tmk [Escherichia coli FVEC1412]
 gi|291469931|gb|EFF12415.1| thymidylate kinase [Escherichia coli B354]
 gi|298279861|gb|EFI21369.1| dTMP kinase [Escherichia coli FVEC1302]
 gi|300307167|gb|EFJ61687.1| thymidylate kinase [Escherichia coli MS 200-1]
 gi|300359303|gb|EFJ75173.1| thymidylate kinase [Escherichia coli MS 198-1]
 gi|305852690|gb|EFM53138.1| thymidylate kinase [Escherichia coli NC101]
 gi|312286227|gb|EFR14140.1| thymidylate kinase [Escherichia coli 2362-75]
 gi|312945660|gb|ADR26487.1| thymidylate kinase [Escherichia coli O83:H1 str. NRG 857C]
 gi|320197575|gb|EFW72188.1| Thymidylate kinase [Escherichia coli WV_060327]
 gi|323190518|gb|EFZ75791.1| thymidylate kinase [Escherichia coli RN587/1]
 gi|324013268|gb|EGB82487.1| thymidylate kinase [Escherichia coli MS 60-1]
 gi|330910913|gb|EGH39423.1| thymidylate kinase [Escherichia coli AA86]
 gi|331045107|gb|EGI17234.1| dTMP kinase [Escherichia coli M605]
 gi|331060928|gb|EGI32892.1| dTMP kinase [Escherichia coli TA143]
 gi|331080234|gb|EGI51413.1| dTMP kinase [Escherichia coli H299]
          Length = 213

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTNWVKE 210


>gi|332109434|gb|EGJ10357.1| thymidylate kinase / thymidylate synthase [Rubrivivax
           benzoatilyticus JA2]
          Length = 205

 Score =  237 bits (605), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 105/209 (50%), Gaps = 9/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G F+SFEGI+GAGK++HI  L  +L+ +  +V VTREPGGT  AE  R ++L     
Sbjct: 1   MTAGRFLSFEGIDGAGKSSHIEWLAGWLRERGREVLVTREPGGTELAERLRELVLHQ--- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA++  AAR DH+   I PAL  G ++LCDRF D+++AYQG         L +L
Sbjct: 58  PMDALTEALLVFAARRDHLATRIEPALAAGAVVLCDRFTDATFAYQGAGRGFDLGVLATL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +    Q   PD T+  DLP                    D FE +D    E+ R  +   
Sbjct: 118 ETWVQQGRQPDLTVWFDLPT------AVAAARRAAVRAPDRFESQDEAFFERVRSGYARR 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           A   P R  I+D+A +  +V   +   + 
Sbjct: 172 AAADPGRFVILDAAATPDAVRAQLEAALE 200


>gi|188534149|ref|YP_001907946.1| thymidylate kinase [Erwinia tasmaniensis Et1/99]
 gi|238689725|sp|B2VDK3|KTHY_ERWT9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|188029191|emb|CAO97063.1| Thymidylate kinase (dTMP kinase) [Erwinia tasmaniensis Et1/99]
          Length = 210

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 111/217 (51%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTAREAVVSELQRHGINDIIFTREPGGTPLAEKLRELIKQGVE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         ++
Sbjct: 60  GERVTDSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDAGLMN 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R+ +L
Sbjct: 120 SLKQAVLGDFAPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A     R   VD+    + V   +   + + +Q++
Sbjct: 174 ALASAD-SRIKTVDATRPLEQVTAALQQTLTQWLQEQ 209


>gi|289551719|ref|YP_003472623.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01]
 gi|315660351|ref|ZP_07913204.1| thymidylate kinase [Staphylococcus lugdunensis M23590]
 gi|289181250|gb|ADC88495.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01]
 gi|315494640|gb|EFU82982.1| thymidylate kinase [Staphylococcus lugdunensis M23590]
          Length = 205

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 8/209 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EG+GKTT I  +   L  +++DV  TREPGG P  E  R V+L          
Sbjct: 4   FITFEGPEGSGKTTVIQAVAEKL-AQDFDVISTREPGGVPTGEEIRKVVLDGNH--MDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         +  L + ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALKQHKIVLCDRYIDSSLAYQGYARGIGIEEVRKLNDFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  +IG +R+ N          +  +++D+  H    + +  I  N  
Sbjct: 121 NGLYPDLTIYLDISAEIGRQRIMN-----NQREQNRLDKEDLKFHNLVIEGYRQIMENGD 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
            R   VD++ +  +V      I+   ++K
Sbjct: 176 KRFRKVDASQNIANVIEETYQIIINFLKK 204


>gi|283833607|ref|ZP_06353348.1| dTMP kinase [Citrobacter youngae ATCC 29220]
 gi|291071290|gb|EFE09399.1| dTMP kinase [Citrobacter youngae ATCC 29220]
          Length = 213

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALARGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD TI LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                    +D+    ++V  +I N +   V+++ +
Sbjct: 179 AKDAS-IRTIDATQPLEAVMADIRNTITRWVKEQGA 213


>gi|170679734|ref|YP_001744081.1| thymidylate kinase [Escherichia coli SMS-3-5]
 gi|218700399|ref|YP_002408028.1| thymidylate kinase [Escherichia coli IAI39]
 gi|300938665|ref|ZP_07153392.1| thymidylate kinase [Escherichia coli MS 21-1]
 gi|301023303|ref|ZP_07187098.1| thymidylate kinase [Escherichia coli MS 69-1]
 gi|226732657|sp|B7NKI2|KTHY_ECO7I RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732660|sp|B1LI47|KTHY_ECOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|170517452|gb|ACB15630.1| thymidylate kinase [Escherichia coli SMS-3-5]
 gi|218370385|emb|CAR18190.1| thymidylate kinase [Escherichia coli IAI39]
 gi|300397072|gb|EFJ80610.1| thymidylate kinase [Escherichia coli MS 69-1]
 gi|300456381|gb|EFK19874.1| thymidylate kinase [Escherichia coli MS 21-1]
          Length = 213

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    +SV   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLESVMDAIRTTVTNWVKE 210


>gi|314932704|ref|ZP_07840074.1| dTMP kinase [Staphylococcus caprae C87]
 gi|313654534|gb|EFS18286.1| dTMP kinase [Staphylococcus caprae C87]
          Length = 205

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ IS + + L   + DV  TREPGG P  E  R V+L    ++    
Sbjct: 4   FITFEGPEGAGKTSVISKVSQKL-ATDMDVITTREPGGVPTGEEIRRVVLEG--NKMDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++D   HEK  + +  I  + P
Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRIIDSDP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R   V++    ++V       + + ++
Sbjct: 176 ERFVKVNADQDLENVVEEAYQSIIKYLK 203


>gi|170780642|ref|YP_001708974.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus]
 gi|189028830|sp|B0RAE3|KTHY_CLAMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|169155210|emb|CAQ00311.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 211

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+FI+ EG +G GK+T  +LL+ +L+ + ++V VTREPGG+   +  R ++L       
Sbjct: 2   TGVFITLEGGDGVGKSTQSALLREWLEEQGHEVVVTREPGGSDLGQEIREIVLHRRG-HI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R  HVE V+RPAL  G ++L DR+LDSS AYQG         +  L  
Sbjct: 61  APRAEALLYAADRAHHVETVVRPALERGAVVLQDRYLDSSVAYQGAGRVLDAAEIRDLSL 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + Q ++PD T++LDL       R++           D  E +    HE+ RQ FL +A 
Sbjct: 121 WAAQGLLPDLTVLLDLD--QAAARIR---LDAARTRFDRLEAERADFHERVRQAFLGLAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+R  +VD+    + +A  I      L+
Sbjct: 176 AEPERFLVVDAGWPREVIAAEIRARAHVLI 205


>gi|225024056|ref|ZP_03713248.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC
           23834]
 gi|224943081|gb|EEG24290.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC
           23834]
          Length = 205

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 7/206 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ +GI+GAGKTT +++++ +   +   V  TREPGGTP  EA R +LL+      G  
Sbjct: 5   FITLDGIDGAGKTTQLAVIREWFAAQERPVLFTREPGGTPLGEALRRLLLNPKTQA-GLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE ++  AAR  H+E+VI PAL +   ++ DRF D+++AYQG         +  L++   
Sbjct: 64  AETLLMFAARAQHIESVILPALEDDVSVVSDRFTDATFAYQGGGRGLPEADIAQLEQWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P  TI+LD+P+++ L R++       S   D FE+++     + RQ +L+ A   P
Sbjct: 124 GNLRPSLTILLDVPLEVSLARIE------RSRNKDRFEQEEADFFTRVRQSYLERAAAAP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211
           +R  +++S      V  +I   + +L
Sbjct: 178 ERYTVINSNRGKTVVRRDIEAALEKL 203


>gi|50120735|ref|YP_049902.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043]
 gi|59798244|sp|Q6D683|KTHY_ERWCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|49611261|emb|CAG74707.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043]
          Length = 219

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 10/206 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT  +++   L+     +V  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKEVLFTREPGGTPLAEKLRELIKQGMA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  V+NVI+PAL +GK ++ DR   SS AYQG         L 
Sbjct: 60  DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  +    PD T+ LDLP  IGL+R + R        LD  E++ +   ++ R  + 
Sbjct: 120 SLRDTVLGNFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRTRYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
            +A    D    +D++ S  +V+ +I
Sbjct: 174 ALAAED-DSILTIDASQSIDAVSADI 198


>gi|223044432|ref|ZP_03614465.1| thymidylate kinase [Staphylococcus capitis SK14]
 gi|222442221|gb|EEE48333.1| thymidylate kinase [Staphylococcus capitis SK14]
          Length = 205

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ IS + + L   + DV  TREPGG P  E  R V+L          
Sbjct: 4   FITFEGPEGAGKTSVISKVSQKL-ATDMDVITTREPGGVPTGEEIRRVVLEGNN--MDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   + PAL + KI+LCDR++DSS AYQG         + +L E ++
Sbjct: 61  TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  ++G +R+     L+     +  +++D   HEK  + +  +  + P
Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRVIDSDP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +R   V++    ++V       + + ++
Sbjct: 176 ERFVKVNADQDLENVVEEAYQSIIKYLK 203


>gi|94987202|ref|YP_595135.1| thymidylate kinase [Lawsonia intracellularis PHE/MN1-00]
 gi|166221750|sp|Q1MQB3|KTHY_LAWIP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|94731451|emb|CAJ54814.1| Thymidylate kinase [Lawsonia intracellularis PHE/MN1-00]
          Length = 208

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 2/209 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGIEG+GKTT I+ L  +   +  DV VTREPGG       R ++LS  +    A
Sbjct: 1   MFITIEGIEGSGKTTLINRLSEYFSSRGEDVIVTREPGGCELGGLLRSLVLSSELG-LTA 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E+E  +F A R  HV   I+PA+M GK + CDR+ DS+  YQG         L    E++
Sbjct: 60  ESELFLFLADRAQHVSECIQPAIMNGKTVFCDRYADSTIVYQGYGRGMNIGKLWEFNEVA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           ++ + P  T++LD+ V+  L+R   R        ++  FE + +  H + R  FL  A  
Sbjct: 120 IKGIWPQKTLLLDIDVEKALERACIRNEALGLNIVEGRFESEPMDFHNRIRDGFLHWAGR 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            PDR  I+++  + + +    ++++ E+V
Sbjct: 180 NPDRITILNADTTPEDLFQQSVSVLREIV 208


>gi|16760076|ref|NP_455693.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16764555|ref|NP_460170.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29142153|ref|NP_805495.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|167553642|ref|ZP_02347390.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167992017|ref|ZP_02573116.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168239102|ref|ZP_02664160.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194733912|ref|YP_002114205.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197261673|ref|ZP_03161747.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198245346|ref|YP_002215938.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204930858|ref|ZP_03221731.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|213053423|ref|ZP_03346301.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213425024|ref|ZP_03357774.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213579917|ref|ZP_03361743.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213612964|ref|ZP_03370790.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213646378|ref|ZP_03376431.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|54037702|sp|P65247|KTHY_SALTI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|54041416|sp|P65246|KTHY_SALTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690322|sp|B5FKA7|KTHY_SALDC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238693684|sp|B4TTH0|KTHY_SALSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|25288292|pir||AI0642 dTMP kinase (EC 2.7.4.9) - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16419717|gb|AAL20129.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502370|emb|CAD08324.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137782|gb|AAO69344.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|194709414|gb|ACF88635.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197239928|gb|EDY22548.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197288135|gb|EDY27522.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197939862|gb|ACH77195.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204320317|gb|EDZ05521.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205321974|gb|EDZ09813.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205329725|gb|EDZ16489.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261246412|emb|CBG24221.1| dTMP kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992975|gb|ACY87860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301157741|emb|CBW17233.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912188|dbj|BAJ36162.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321223815|gb|EFX48878.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323129469|gb|ADX16899.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326623686|gb|EGE30031.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 213

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                R   +D+     +V  +I   V + VQ++ +
Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|54297309|ref|YP_123678.1| thymidylate kinase [Legionella pneumophila str. Paris]
 gi|59798140|sp|Q5X5G6|KTHY_LEGPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53751094|emb|CAH12505.1| hypothetical protein lpp1354 [Legionella pneumophila str. Paris]
          Length = 212

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 8/215 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T ++L+   L +K      TREPGGT   E  R ++ +   +  
Sbjct: 5   TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E ++  AAR+  +E VI+PAL  G+ ++ DRF  S+ AYQG         ++ L 
Sbjct: 65  LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMNMRVINELS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              ++   PD T+ LD+  ++G+ R ++R         D  E++ +    +    +  + 
Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHVLV 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +  P+   ++D+  S   V ++I +++ E ++  +
Sbjct: 179 KQNPE-IMMIDANRSLDEVQSSIQSVIEEFIEHNL 212


>gi|303233183|ref|ZP_07319856.1| dTMP kinase [Atopobium vaginae PB189-T1-4]
 gi|302480768|gb|EFL43855.1| dTMP kinase [Atopobium vaginae PB189-T1-4]
          Length = 207

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 7/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G GKTT +  L    +R    V   REPGGT  +EA R ++L+  +     
Sbjct: 1   MFITFEGIDGCGKTTQVKRLVSAFRRAGNKVVSLREPGGTTISEAIRSMVLNPAMSSMCN 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E +++ AAR   V  VI PAL    +++CDR+ DS++AYQ          +    E+ 
Sbjct: 61  ETELLLYEAARAQLVREVIEPALARDVVVVCDRYADSTFAYQYAARGLDKELVCRANELG 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              V+PD TI+LD+ VD   +R   +         D  E++      + R  ++++AR  
Sbjct: 121 SCGVVPDITIVLDMDVDTAYRRATAQSC-------DRLEQEGREFQTRVRNGYIELARLY 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P+R H++    + Q+V   I  ++ E
Sbjct: 174 PERVHLIGGDDTPQAVFNRICVVLGE 199


>gi|193216174|ref|YP_001997373.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110]
 gi|193089651|gb|ACF14926.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110]
          Length = 226

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 6/211 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+FEGI+G+GK+T I LLK FLQ + ++V   REPGG P AE  R +LL    +   
Sbjct: 7   GFLITFEGIDGSGKSTQIKLLKDFLQSRGFEVLSLREPGGVPVAEQIRAILLENKNE-IN 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE ++F+A+R   V+ VI PAL + ++++ DRF DS+ AYQG         +  + EI
Sbjct: 66  PIAELLLFSASRAALVQAVIIPALEQRQVVVLDRFYDSTVAYQGYGRGISLERIHQINEI 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKRRQIFL 178
           +   ++P+ T   DL  +  L R  +  SL          LD  ER  +   ++ R  + 
Sbjct: 126 ASFGLLPNLTFYFDLQPEDALLRKFSEKSLPLSFKDNEIPLDRMERAGLEFFQRVRTGYK 185

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           ++ +  P+R + +D+  S   +   ++  + 
Sbjct: 186 ELVQTAPERFYEIDALCSISEIHQKVVERIK 216


>gi|332173841|gb|AEE23095.1| thymidylate kinase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 209

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 8/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           ++ G FI  EG+EGAGK+T +S++K  +++  + +  TREPGGT  AEA R  +      
Sbjct: 2   IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHRLICTREPGGTAMAEAIRECVKKDWQN 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    EAE ++  AAR   + NVI PAL  GK +L DR   SS AYQG         +  
Sbjct: 62  ETVTTEAELLLMYAARAQLLHNVIHPALSSGKWVLGDRHDMSSQAYQGGGREIPQTLIQP 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L++I+++  +PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R  +L 
Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSVGLQRARGR------GELDRIEQLDISFFERTRARYLS 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A    D C ++++    +SV  +I   + + +
Sbjct: 176 LAEQD-DNCVVINTMQPIESVHHDIKLAIQQFL 207


>gi|285017427|ref|YP_003375138.1| thymidylate kinase (dtmp kinase) protein [Xanthomonas albilineans
           GPE PC73]
 gi|283472645|emb|CBA15150.1| probable thymidylate kinase (dtmp kinase) protein [Xanthomonas
           albilineans]
          Length = 223

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 10/197 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVD 60
            F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE  R +LL        +
Sbjct: 10  RFVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDTAPSSSAE 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AE E ++  AAR  HV  VIRPAL  G  ++ DRF DSSYAYQGE       ++  L
Sbjct: 70  PLSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWIADL 129

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  +V  + P  T++LDL V IG  R   R         D  E +     ++ R  F   
Sbjct: 130 ERRAV-GLQPGLTLLLDLDVQIGRARTSGRDL-----WPDRIESEQDDFFQRVRAGFRQR 183

Query: 181 ARNQPDRCHIVDSAHSF 197
           A   P R  ++D++   
Sbjct: 184 ATQDPQRFRVIDASQPP 200


>gi|85374070|ref|YP_458132.1| thymidylate kinase [Erythrobacter litoralis HTCC2594]
 gi|84787153|gb|ABC63335.1| thymidylate kinase [Erythrobacter litoralis HTCC2594]
          Length = 212

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 106/212 (50%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T   LL   L  +  +  VTREPGGT  AEA R +LL    D
Sbjct: 1   MTRGRFIALEGGEGTGKSTQARLLAEALSTRGIECVVTREPGGTEGAEAIRRLLLDPPGD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +G  AEA++FAAAR DHVE +I PAL  G  ++ DRFLDSS AYQG         + +L
Sbjct: 61  GWGPRAEALLFAAARSDHVEKLILPALERGAWVVSDRFLDSSRAYQGGAGGIGDQAVRTL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I    + PD T+++++      +R+ +R   R     D    +    H      F   
Sbjct: 121 HDIGSGGLRPDLTVLIEVEPATIAERLADRDGNRS----DAIGGRSAQYHADVAASFKRF 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P    +VD   +   V + IL  +  L+
Sbjct: 177 AAEDPGGFAVVDGEGTPDEVHSRILEAIEPLI 208


>gi|16129061|ref|NP_415616.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655]
 gi|24112504|ref|NP_707014.1| thymidylate kinase [Shigella flexneri 2a str. 301]
 gi|30062632|ref|NP_836803.1| thymidylate kinase [Shigella flexneri 2a str. 2457T]
 gi|74311659|ref|YP_310078.1| thymidylate kinase [Shigella sonnei Ss046]
 gi|82544436|ref|YP_408383.1| thymidylate kinase [Shigella boydii Sb227]
 gi|82777289|ref|YP_403638.1| thymidylate kinase [Shigella dysenteriae Sd197]
 gi|89107944|ref|AP_001724.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110]
 gi|110805112|ref|YP_688632.1| thymidylate kinase [Shigella flexneri 5 str. 8401]
 gi|157157223|ref|YP_001462330.1| thymidylate kinase [Escherichia coli E24377A]
 gi|157160624|ref|YP_001457942.1| thymidylate kinase [Escherichia coli HS]
 gi|170020507|ref|YP_001725461.1| thymidylate kinase [Escherichia coli ATCC 8739]
 gi|170080749|ref|YP_001730069.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B]
 gi|187732338|ref|YP_001880732.1| thymidylate kinase [Shigella boydii CDC 3083-94]
 gi|188495742|ref|ZP_03003012.1| thymidylate kinase [Escherichia coli 53638]
 gi|194429813|ref|ZP_03062327.1| thymidylate kinase [Escherichia coli B171]
 gi|194433682|ref|ZP_03065958.1| thymidylate kinase [Shigella dysenteriae 1012]
 gi|209918353|ref|YP_002292437.1| thymidylate kinase [Escherichia coli SE11]
 gi|218553675|ref|YP_002386588.1| thymidylate kinase [Escherichia coli IAI1]
 gi|218694631|ref|YP_002402298.1| thymidylate kinase [Escherichia coli 55989]
 gi|238900352|ref|YP_002926148.1| thymidylate kinase [Escherichia coli BW2952]
 gi|253773879|ref|YP_003036710.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161204|ref|YP_003044312.1| thymidylate kinase [Escherichia coli B str. REL606]
 gi|256018646|ref|ZP_05432511.1| thymidylate kinase [Shigella sp. D9]
 gi|256023205|ref|ZP_05437070.1| thymidylate kinase [Escherichia sp. 4_1_40B]
 gi|260843338|ref|YP_003221116.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009]
 gi|260854581|ref|YP_003228472.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368]
 gi|260867461|ref|YP_003233863.1| thymidylate kinase [Escherichia coli O111:H- str. 11128]
 gi|293414391|ref|ZP_06657040.1| thymidylate kinase [Escherichia coli B185]
 gi|293433387|ref|ZP_06661815.1| thymidylate kinase [Escherichia coli B088]
 gi|297516810|ref|ZP_06935196.1| thymidylate kinase [Escherichia coli OP50]
 gi|300816798|ref|ZP_07097018.1| thymidylate kinase [Escherichia coli MS 107-1]
 gi|300821123|ref|ZP_07101272.1| thymidylate kinase [Escherichia coli MS 119-7]
 gi|300902489|ref|ZP_07120470.1| thymidylate kinase [Escherichia coli MS 84-1]
 gi|300918704|ref|ZP_07135282.1| thymidylate kinase [Escherichia coli MS 115-1]
 gi|300922624|ref|ZP_07138722.1| thymidylate kinase [Escherichia coli MS 182-1]
 gi|300928351|ref|ZP_07143885.1| thymidylate kinase [Escherichia coli MS 187-1]
 gi|300948684|ref|ZP_07162764.1| thymidylate kinase [Escherichia coli MS 116-1]
 gi|300956239|ref|ZP_07168549.1| thymidylate kinase [Escherichia coli MS 175-1]
 gi|301029599|ref|ZP_07192674.1| thymidylate kinase [Escherichia coli MS 196-1]
 gi|301328531|ref|ZP_07221595.1| thymidylate kinase [Escherichia coli MS 78-1]
 gi|301644512|ref|ZP_07244506.1| thymidylate kinase [Escherichia coli MS 146-1]
 gi|307137733|ref|ZP_07497089.1| thymidylate kinase [Escherichia coli H736]
 gi|307310125|ref|ZP_07589775.1| thymidylate kinase [Escherichia coli W]
 gi|309788170|ref|ZP_07682776.1| thymidylate kinase [Shigella dysenteriae 1617]
 gi|309796559|ref|ZP_07690966.1| thymidylate kinase [Escherichia coli MS 145-7]
 gi|331641641|ref|ZP_08342776.1| dTMP kinase [Escherichia coli H736]
 gi|331652150|ref|ZP_08353169.1| dTMP kinase [Escherichia coli M718]
 gi|331667498|ref|ZP_08368362.1| dTMP kinase [Escherichia coli TA271]
 gi|331676888|ref|ZP_08377584.1| dTMP kinase [Escherichia coli H591]
 gi|61227288|sp|P0A720|KTHY_ECOLI RecName: Full=Thymidylate kinase; AltName: Full=Thymidine
           monophosphate kinase; AltName: Full=dTMP kinase;
           Short=TMPK
 gi|61227291|sp|P0A721|KTHY_SHIFL RecName: Full=Thymidylate kinase; AltName: Full=Thymidine
           monophosphate kinase; AltName: Full=dTMP kinase;
           Short=TMPK
 gi|123342975|sp|Q0T5T8|KTHY_SHIF8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123559364|sp|Q31ZF3|KTHY_SHIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123562339|sp|Q32EV8|KTHY_SHIDS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123617461|sp|Q3Z319|KTHY_SHISS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166987701|sp|A7ZKK1|KTHY_ECO24 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166987702|sp|A7ZZ55|KTHY_ECOHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189028833|sp|B1IUG7|KTHY_ECOLC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|226732658|sp|B7LX32|KTHY_ECO8A RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621735|sp|B1XA08|KTHY_ECODH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238057698|sp|B6I9H5|KTHY_ECOSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238689520|sp|B2U523|KTHY_SHIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808291|sp|B7LG31|KTHY_ECO55 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|259494268|sp|C4ZS38|KTHY_ECOBW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1244710|gb|AAB06878.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110]
 gi|1787340|gb|AAC74182.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655]
 gi|4062665|dbj|BAA35905.1| thymidylate kinase [Escherichia coli str. K12 substr. W3110]
 gi|24051393|gb|AAN42721.1| thymidylate kinase [Shigella flexneri 2a str. 301]
 gi|30040878|gb|AAP16609.1| thymidylate kinase [Shigella flexneri 2a str. 2457T]
 gi|73855136|gb|AAZ87843.1| thymidylate kinase [Shigella sonnei Ss046]
 gi|81241437|gb|ABB62147.1| thymidylate kinase [Shigella dysenteriae Sd197]
 gi|81245847|gb|ABB66555.1| thymidylate kinase [Shigella boydii Sb227]
 gi|110614660|gb|ABF03327.1| thymidylate kinase [Shigella flexneri 5 str. 8401]
 gi|157066304|gb|ABV05559.1| thymidylate kinase [Escherichia coli HS]
 gi|157079253|gb|ABV18961.1| thymidylate kinase [Escherichia coli E24377A]
 gi|169755435|gb|ACA78134.1| dTMP kinase [Escherichia coli ATCC 8739]
 gi|169888584|gb|ACB02291.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B]
 gi|187429330|gb|ACD08604.1| thymidylate kinase [Shigella boydii CDC 3083-94]
 gi|188490941|gb|EDU66044.1| thymidylate kinase [Escherichia coli 53638]
 gi|194412160|gb|EDX28468.1| thymidylate kinase [Escherichia coli B171]
 gi|194418111|gb|EDX34204.1| thymidylate kinase [Shigella dysenteriae 1012]
 gi|209911612|dbj|BAG76686.1| thymidylate kinase [Escherichia coli SE11]
 gi|218351363|emb|CAU97069.1| thymidylate kinase [Escherichia coli 55989]
 gi|218360443|emb|CAQ97997.1| thymidylate kinase [Escherichia coli IAI1]
 gi|238863660|gb|ACR65658.1| thymidylate kinase [Escherichia coli BW2952]
 gi|242376901|emb|CAQ31619.1| dTMP kinase [Escherichia coli BL21(DE3)]
 gi|253324923|gb|ACT29525.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973105|gb|ACT38776.1| thymidylate kinase [Escherichia coli B str. REL606]
 gi|253977319|gb|ACT42989.1| thymidylate kinase [Escherichia coli BL21(DE3)]
 gi|257753230|dbj|BAI24732.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368]
 gi|257758485|dbj|BAI29982.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009]
 gi|257763817|dbj|BAI35312.1| thymidylate kinase [Escherichia coli O111:H- str. 11128]
 gi|260449763|gb|ACX40185.1| dTMP kinase [Escherichia coli DH1]
 gi|281600514|gb|ADA73498.1| Thymidylate kinase [Shigella flexneri 2002017]
 gi|291324206|gb|EFE63628.1| thymidylate kinase [Escherichia coli B088]
 gi|291434449|gb|EFF07422.1| thymidylate kinase [Escherichia coli B185]
 gi|299877521|gb|EFI85732.1| thymidylate kinase [Escherichia coli MS 196-1]
 gi|300316932|gb|EFJ66716.1| thymidylate kinase [Escherichia coli MS 175-1]
 gi|300405425|gb|EFJ88963.1| thymidylate kinase [Escherichia coli MS 84-1]
 gi|300414139|gb|EFJ97449.1| thymidylate kinase [Escherichia coli MS 115-1]
 gi|300421032|gb|EFK04343.1| thymidylate kinase [Escherichia coli MS 182-1]
 gi|300451823|gb|EFK15443.1| thymidylate kinase [Escherichia coli MS 116-1]
 gi|300463609|gb|EFK27102.1| thymidylate kinase [Escherichia coli MS 187-1]
 gi|300526422|gb|EFK47491.1| thymidylate kinase [Escherichia coli MS 119-7]
 gi|300530572|gb|EFK51634.1| thymidylate kinase [Escherichia coli MS 107-1]
 gi|300845077|gb|EFK72837.1| thymidylate kinase [Escherichia coli MS 78-1]
 gi|301077144|gb|EFK91950.1| thymidylate kinase [Escherichia coli MS 146-1]
 gi|306909843|gb|EFN40337.1| thymidylate kinase [Escherichia coli W]
 gi|308119871|gb|EFO57133.1| thymidylate kinase [Escherichia coli MS 145-7]
 gi|308924022|gb|EFP69523.1| thymidylate kinase [Shigella dysenteriae 1617]
 gi|309701370|emb|CBJ00671.1| Thymidylate kinase [Escherichia coli ETEC H10407]
 gi|313650449|gb|EFS14856.1| thymidylate kinase [Shigella flexneri 2a str. 2457T]
 gi|315060375|gb|ADT74702.1| thymidylate kinase [Escherichia coli W]
 gi|315135730|dbj|BAJ42889.1| thymidylate kinase [Escherichia coli DH1]
 gi|315253898|gb|EFU33866.1| thymidylate kinase [Escherichia coli MS 85-1]
 gi|315618269|gb|EFU98859.1| thymidylate kinase [Escherichia coli 3431]
 gi|320174249|gb|EFW49410.1| Thymidylate kinase [Shigella dysenteriae CDC 74-1112]
 gi|320179203|gb|EFW54161.1| Thymidylate kinase [Shigella boydii ATCC 9905]
 gi|320186954|gb|EFW61667.1| Thymidylate kinase [Shigella flexneri CDC 796-83]
 gi|320200993|gb|EFW75577.1| Thymidylate kinase [Escherichia coli EC4100B]
 gi|323163640|gb|EFZ49462.1| thymidylate kinase [Escherichia coli E128010]
 gi|323165606|gb|EFZ51393.1| thymidylate kinase [Shigella sonnei 53G]
 gi|323175671|gb|EFZ61265.1| thymidylate kinase [Escherichia coli 1180]
 gi|323185779|gb|EFZ71140.1| thymidylate kinase [Escherichia coli 1357]
 gi|323379065|gb|ADX51333.1| thymidylate kinase [Escherichia coli KO11]
 gi|323937838|gb|EGB34102.1| thymidylate kinase [Escherichia coli E1520]
 gi|323942567|gb|EGB38734.1| thymidylate kinase [Escherichia coli E482]
 gi|323947599|gb|EGB43603.1| thymidylate kinase [Escherichia coli H120]
 gi|323962697|gb|EGB58275.1| thymidylate kinase [Escherichia coli H489]
 gi|323973313|gb|EGB68502.1| thymidylate kinase [Escherichia coli TA007]
 gi|324017491|gb|EGB86710.1| thymidylate kinase [Escherichia coli MS 117-3]
 gi|324117331|gb|EGC11238.1| thymidylate kinase [Escherichia coli E1167]
 gi|331038439|gb|EGI10659.1| dTMP kinase [Escherichia coli H736]
 gi|331050428|gb|EGI22486.1| dTMP kinase [Escherichia coli M718]
 gi|331065083|gb|EGI36978.1| dTMP kinase [Escherichia coli TA271]
 gi|331075577|gb|EGI46875.1| dTMP kinase [Escherichia coli H591]
 gi|332089300|gb|EGI94406.1| thymidylate kinase [Shigella boydii 5216-82]
 gi|332092925|gb|EGI97993.1| thymidylate kinase [Shigella dysenteriae 155-74]
 gi|332094408|gb|EGI99457.1| thymidylate kinase [Shigella boydii 3594-74]
 gi|332102067|gb|EGJ05413.1| thymidylate kinase [Shigella sp. D9]
          Length = 213

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|119486991|ref|ZP_01620863.1| Thymidylate kinase [Lyngbya sp. PCC 8106]
 gi|119455920|gb|EAW37054.1| Thymidylate kinase [Lyngbya sp. PCC 8106]
          Length = 219

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 12/226 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDV---HVTREPGGTPAAEAARHVLLS 56
           MN G  I FEG EG GKTT I    ++L+ +    V     T+EPGGT    + R++LL 
Sbjct: 1   MN-GKLIVFEGSEGGGKTTQIQQTDQWLRDQLGSSVPAIITTKEPGGTALGRSLRNILLD 59

Query: 57  CG-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
               +     AE ++FA+ R  HVE  ++P L +G I+LCDRF DS+ AYQG        
Sbjct: 60  SRLEEPIAPTAELLLFASDRAQHVETFLKPHLKQGAIILCDRFTDSTIAYQGFGRGLDKN 119

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +  L +I+   +  D T+  D+ ++ GL R Q R        +D  E+ D+  H++  Q
Sbjct: 120 LIKQLNQIATVGLESDLTLWFDIEIEKGLARTQTR------GEMDRMEKADLAFHQRVNQ 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            F ++A    DR   +D+  S Q V+T I  I+ + + K    L S
Sbjct: 174 GFCELADQAGDRMIRIDANLSLQQVSTQIQTILTQYLLKWGFTLQS 219


>gi|56460444|ref|YP_155725.1| thymidylate kinase [Idiomarina loihiensis L2TR]
 gi|73920821|sp|Q5QZ32|KTHY_IDILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56179454|gb|AAV82176.1| Thymidylate kinase [Idiomarina loihiensis L2TR]
          Length = 205

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 7/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI  EG+EGAGK++ I+ +   LQ K   V   REPGGTP AE+ R ++     ++ 
Sbjct: 2   SGKFIVIEGLEGAGKSSAIASVVTHLQAKGIQVETVREPGGTPLAESLRDLVKKKWEEKV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  A+R+  V+N+I+PAL + + ++ DR   SS AYQG         L  +++
Sbjct: 62  SPTTELLLMYASRVQLVDNIIKPALSKNRWVIGDRHDLSSRAYQGGGRELGDELLQKIRK 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++    PD T++LD+    GL+R + R        LD  E +D+   ++ RQ +L+IA 
Sbjct: 122 ITLGNFTPDLTLLLDVEEKKGLERARER------GELDRIEEEDLAFFQRTRQRYLNIAA 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P    ++D+  S   V  +IL  + E +
Sbjct: 176 KDPS-IIVIDANQSMLDVHQSILRAIEEYL 204


>gi|297627199|ref|YP_003688962.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922964|emb|CBL57546.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 212

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 9/208 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F+ FEG +G GK+T + LL   L        VTREPGGTP  +  R +LL     +  
Sbjct: 8   GWFVVFEGGDGVGKSTQVELLADALADAGVSHLVTREPGGTPLGDNIRELLLDPASGDVA 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+++AA +  H+  V+ PAL  GK+++CDR+LDS  AYQG     +   +  + + 
Sbjct: 68  PRAEALLYAADKAQHLHEVVVPALAAGKVVVCDRYLDSMLAYQGAGRVLELREVADIADW 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + PD T++LDL  D           +      D  E+  V  H + RQ FLD+A  
Sbjct: 128 ATRGLRPDLTVLLDLDPDEA---------VGMKEHKDRLEQAGVEFHRRVRQGFLDLANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
            P+R  ++      +  A  +   +  L
Sbjct: 179 DPERYLVLPGRQGREWAAGRVRERLRGL 206


>gi|218689050|ref|YP_002397262.1| thymidylate kinase [Escherichia coli ED1a]
 gi|254808292|sp|B7MTM8|KTHY_ECO81 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218426614|emb|CAR07442.1| thymidylate kinase [Escherichia coli ED1a]
          Length = 213

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMGAIRTTVTNWVKE 210


>gi|109898434|ref|YP_661689.1| thymidylate kinase [Pseudoalteromonas atlantica T6c]
 gi|109700715|gb|ABG40635.1| thymidylate kinase [Pseudoalteromonas atlantica T6c]
          Length = 209

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 8/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           ++ G FI  EG+EGAGK+T +S++K  +++  + +  TREPGGT  AEA R  +      
Sbjct: 2   IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHSLTCTREPGGTAMAEAIRECVKKDWPN 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    EAE ++  AAR   + NVI PAL  G  +L DR   SS AYQG         +  
Sbjct: 62  ETVTTEAELLLMYAARAQLLHNVIHPALTSGSWVLGDRHDMSSQAYQGGGREIPQTLIQP 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L++I+++  +PD T+ LD+   IGL R + R        LD  E+ D+   E+ R  +L 
Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSIGLARARGR------GELDRIEQLDISFFERTRARYLS 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A    + C ++D+  S + V  +I + + + +
Sbjct: 176 LAEQD-ENCVVIDTMQSIEQVHHDIQHAMQQFL 207


>gi|291282118|ref|YP_003498936.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|209773158|gb|ACI84891.1| thymidylate kinase [Escherichia coli]
 gi|209773164|gb|ACI84894.1| thymidylate kinase [Escherichia coli]
 gi|290761991|gb|ADD55952.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|320637549|gb|EFX07349.1| thymidylate kinase [Escherichia coli O157:H7 str. G5101]
 gi|320643110|gb|EFX12311.1| thymidylate kinase [Escherichia coli O157:H- str. 493-89]
 gi|320648568|gb|EFX17223.1| thymidylate kinase [Escherichia coli O157:H- str. H 2687]
 gi|320653882|gb|EFX21956.1| thymidylate kinase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320659362|gb|EFX26931.1| thymidylate kinase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664497|gb|EFX31648.1| thymidylate kinase [Escherichia coli O157:H7 str. LSU-61]
          Length = 213

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTRWVKE 210


>gi|188026129|ref|ZP_02960979.2| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827]
 gi|188021733|gb|EDU59773.1| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827]
          Length = 212

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M +  +I  EG+EGAGKTT I  +   L +    D+  TREPGGTP AE  R ++     
Sbjct: 5   MKN-AYIVIEGLEGAGKTTAIKTVVETLNQAGIQDIAFTREPGGTPLAEKLRELIKQGIS 63

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VENVI+PAL  GK ++ DR   SS AYQG         + 
Sbjct: 64  GEKVTDKAELLMLYAARVQLVENVIKPALAAGKWVVGDRHDLSSQAYQGGGRGIDRQLMQ 123

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+++ + E  P  T+ LDLP  +GL+R + R        LD  E++ +   E+ R  + 
Sbjct: 124 SLRDLVLGEFKPALTLYLDLPPALGLQRARAR------GELDRIEQESLAFFERTRARYR 177

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  +    +D++ + + V  +I   + + + K
Sbjct: 178 ELAASD-ETILTIDASQNIEQVQHDIRQALQQWLAK 212


>gi|261339399|ref|ZP_05967257.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316]
 gi|288318200|gb|EFC57138.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316]
          Length = 213

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 12/219 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L      D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVDTLNTLGVADIVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL +GK ++ DR   S+ AYQG         
Sbjct: 60  VGDEVINDKAEVLMFYAARVQLVETVIKPALADGKWVIGDRHDLSTQAYQGGGRGIDQTM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +L++A         +D+  S   V   I   V   +Q++
Sbjct: 174 YLELAGQDK-TIRTIDATQSLDDVTRAIQQTVTTWLQEQ 211


>gi|56413814|ref|YP_150889.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62179720|ref|YP_216137.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161614574|ref|YP_001588539.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|168233077|ref|ZP_02658135.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168244269|ref|ZP_02669201.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168264293|ref|ZP_02686266.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168467156|ref|ZP_02700998.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168822302|ref|ZP_02834302.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194443726|ref|YP_002040454.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450656|ref|YP_002045199.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194472980|ref|ZP_03078964.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197251767|ref|YP_002146843.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197362737|ref|YP_002142374.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|200390972|ref|ZP_03217583.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205353065|ref|YP_002226866.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207857293|ref|YP_002243944.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224584293|ref|YP_002638091.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238910980|ref|ZP_04654817.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|73920828|sp|Q5PGT4|KTHY_SALPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|75483993|sp|Q57QF5|KTHY_SALCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030841|sp|A9N5K6|KTHY_SALPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238689910|sp|B5BAH5|KTHY_SALPK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690068|sp|B5F907|KTHY_SALA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690412|sp|B5QXD6|KTHY_SALEP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690500|sp|B5RBA2|KTHY_SALG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238690636|sp|B4TFH5|KTHY_SALHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238693599|sp|B4T332|KTHY_SALNS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808304|sp|C0Q792|KTHY_SALPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56128071|gb|AAV77577.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62127353|gb|AAX65056.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161363938|gb|ABX67706.1| hypothetical protein SPAB_02323 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402389|gb|ACF62611.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194408960|gb|ACF69179.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459344|gb|EDX48183.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195630427|gb|EDX49053.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197094214|emb|CAR59719.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197215470|gb|ACH52867.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|199603417|gb|EDZ01963.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205272846|emb|CAR37773.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205332642|gb|EDZ19406.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205336753|gb|EDZ23517.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205341244|gb|EDZ28008.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205347282|gb|EDZ33913.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206709096|emb|CAR33429.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224468820|gb|ACN46650.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|320086360|emb|CBY96133.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|322714190|gb|EFZ05761.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|326628144|gb|EGE34487.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 213

 Score =  236 bits (604), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGIWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                R   +D+     +V  +I   V + VQ++ +
Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|322616575|gb|EFY13484.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322619910|gb|EFY16784.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622478|gb|EFY19323.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322629405|gb|EFY26182.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633924|gb|EFY30662.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636854|gb|EFY33557.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641346|gb|EFY37985.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645110|gb|EFY41639.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322652275|gb|EFY48631.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655626|gb|EFY51928.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660931|gb|EFY57161.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322665484|gb|EFY61672.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322667539|gb|EFY63700.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673666|gb|EFY69768.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677592|gb|EFY73656.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322679743|gb|EFY75782.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687215|gb|EFY83187.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323194002|gb|EFZ79203.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323199411|gb|EFZ84504.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202426|gb|EFZ87468.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323208861|gb|EFZ93799.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213786|gb|EFZ98566.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217835|gb|EGA02550.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323221677|gb|EGA06089.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323224737|gb|EGA09005.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229637|gb|EGA13760.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323232862|gb|EGA16958.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240102|gb|EGA24146.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242911|gb|EGA26932.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323246826|gb|EGA30796.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323252039|gb|EGA35901.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255540|gb|EGA39299.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261608|gb|EGA45185.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266968|gb|EGA50453.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272072|gb|EGA55486.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 213

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRAVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                R   +D+     +V  +I   V + VQ++ +
Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|261346039|ref|ZP_05973683.1| dTMP kinase [Providencia rustigianii DSM 4541]
 gi|282565926|gb|EFB71461.1| dTMP kinase [Providencia rustigianii DSM 4541]
          Length = 208

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M +  FI  EG+EGAGKTT I+ +   L+     ++  TREPGGTP AE  R ++     
Sbjct: 1   MKN-QFIVIEGLEGAGKTTAINTVVETLKLAGINEMVFTREPGGTPLAEKLRELIKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D+   +AE ++  AAR+  V+ VI+PAL  GK ++ DR   SS AYQG         + 
Sbjct: 60  GDKVTDKAELLMLYAARVQLVDTVIKPALAAGKWVIGDRHDLSSQAYQGGGREIDRHLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+ + + +  P  T+ LDLP ++GL+R ++R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRNLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRHRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A    D    +D++   + V T+I   + E + K
Sbjct: 174 ELAAAD-DTILTIDASQDIEQVQTDIRRTLLEWLGK 208


>gi|323976529|gb|EGB71617.1| thymidylate kinase [Escherichia coli TW10509]
          Length = 213

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALTNGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    +SV   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLESVMDAIRTTVTNWVKE 210


>gi|259908791|ref|YP_002649147.1| thymidylate kinase [Erwinia pyrifoliae Ep1/96]
 gi|224964413|emb|CAX55922.1| Thymidylate kinase (DTMP kinase) [Erwinia pyrifoliae Ep1/96]
 gi|283478770|emb|CAY74686.1| tmk [Erwinia pyrifoliae DSM 12163]
          Length = 210

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/217 (33%), Positives = 110/217 (50%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDAVVSELQRHGINDIVFTREPGGTPLAEKLRDLIKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         ++
Sbjct: 60  GERVTNSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMNSDLMN 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R+ +L
Sbjct: 120 CLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A     R   +D+    + V   +   + + +Q++
Sbjct: 174 ALASAD-SRIKTIDATRPLEQVTAALQQTLNQWLQEQ 209


>gi|312971234|ref|ZP_07785412.1| thymidylate kinase [Escherichia coli 1827-70]
 gi|310336436|gb|EFQ01622.1| thymidylate kinase [Escherichia coli 1827-70]
          Length = 213

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAKDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|145632722|ref|ZP_01788456.1| thymidylate kinase [Haemophilus influenzae 3655]
 gi|145634547|ref|ZP_01790256.1| thymidylate kinase [Haemophilus influenzae PittAA]
 gi|229844384|ref|ZP_04464524.1| thymidylate kinase [Haemophilus influenzae 6P18H1]
 gi|144986917|gb|EDJ93469.1| thymidylate kinase [Haemophilus influenzae 3655]
 gi|145268092|gb|EDK08087.1| thymidylate kinase [Haemophilus influenzae PittAA]
 gi|229812633|gb|EEP48322.1| thymidylate kinase [Haemophilus influenzae 6P18H1]
          Length = 210

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+N+I+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I   V   
Sbjct: 176 KDNP-KAVMINAEQSIELVQADIERAVKNW 204


>gi|15801215|ref|NP_287232.1| thymidylate kinase [Escherichia coli O157:H7 EDL933]
 gi|15830730|ref|NP_309503.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai]
 gi|195938857|ref|ZP_03084239.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4024]
 gi|208807792|ref|ZP_03250129.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208815733|ref|ZP_03256912.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208822400|ref|ZP_03262719.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209400206|ref|YP_002269942.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115]
 gi|217328521|ref|ZP_03444603.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588]
 gi|254792480|ref|YP_003077317.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359]
 gi|261226998|ref|ZP_05941279.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256232|ref|ZP_05948765.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK966]
 gi|23821781|sp|Q8X8H6|KTHY_ECO57 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238057697|sp|B5YVW6|KTHY_ECO5E RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12514642|gb|AAG55844.1|AE005319_13 thymidylate kinase [Escherichia coli O157:H7 str. EDL933]
 gi|13360940|dbj|BAB34899.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai]
 gi|208727593|gb|EDZ77194.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208732381|gb|EDZ81069.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208737885|gb|EDZ85568.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209161606|gb|ACI39039.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115]
 gi|209773160|gb|ACI84892.1| thymidylate kinase [Escherichia coli]
 gi|209773162|gb|ACI84893.1| thymidylate kinase [Escherichia coli]
 gi|209773166|gb|ACI84895.1| thymidylate kinase [Escherichia coli]
 gi|217318948|gb|EEC27374.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588]
 gi|254591880|gb|ACT71241.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359]
 gi|320188105|gb|EFW62770.1| Thymidylate kinase [Escherichia coli O157:H7 str. EC1212]
 gi|326339320|gb|EGD63134.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1125]
 gi|326340401|gb|EGD64204.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1044]
          Length = 213

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEIITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTRWVKE 210


>gi|148827653|ref|YP_001292406.1| thymidylate kinase [Haemophilus influenzae PittGG]
 gi|254808296|sp|A5UGW7|KTHY_HAEIG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148718895|gb|ABR00023.1| thymidylate kinase [Haemophilus influenzae PittGG]
          Length = 210

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I   V   
Sbjct: 176 KDNP-KAVMINAEQSIELVQADIERAVKNW 204


>gi|33152912|ref|NP_874265.1| thymidylate kinase [Haemophilus ducreyi 35000HP]
 gi|46576466|sp|Q7VKH4|KTHY_HAEDU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33149137|gb|AAP96654.1| thymidylate kinase [Haemophilus ducreyi 35000HP]
          Length = 214

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGKTT   ++   L++     +  TREPGGTP AE  R+++     + 
Sbjct: 7   RGKFIVLEGLEGAGKTTAHQIILTQLKQAGIQQIVQTREPGGTPLAEKLRYLIKHEFEEP 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR   VENVI+PAL  GK +L DR   SS AYQG         L+SL+
Sbjct: 67  ISPQAELLMLYAARAQLVENVIKPALSAGKWVLGDRHDMSSQAYQGGGRQLDVALLNSLK 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   IGL R            LD  E++ +    + R+ +L + 
Sbjct: 127 ESVLGPFEPDLTIYLDIDPAIGLARASG------CGELDRIEQQSLDFFYRTRERYLALT 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++  ++  I+++    + V  +I   V + +
Sbjct: 181 QHN-EKAVIINAEQPLEKVTNDIQQAVQKFL 210


>gi|298345977|ref|YP_003718664.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
 gi|298236038|gb|ADI67170.1| dTMP kinase [Mobiluncus curtisii ATCC 43063]
          Length = 239

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++FEG +G GKTT I+    +++ + +DV  TREPGGT    A R +LL  G  + 
Sbjct: 30  QGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DV 87

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA++FAA R  HV  +I PA+ +GK+++ DR+L SS AYQG         +  L  
Sbjct: 88  SPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSL 147

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LDL  ++  +R     SL      D  ER  +   ++ R+ FL ++ 
Sbjct: 148 WATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSE 204

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            Q D   +VD++     +AT +   + +L+
Sbjct: 205 GQ-DTWLVVDASLPVAEIATQVRLRLAQLL 233


>gi|332035197|gb|EGI71706.1| thymidylate kinase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 208

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 112/211 (53%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI  EG+EGAGK+T ISL + FL ++  D    REPGGTP AE+ R ++ +   +E 
Sbjct: 2   KPKFIVIEGLEGAGKSTAISLCQDFLNKQKIDFINVREPGGTPLAESLRTLVKAEHEEEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR   + NVI PAL +G+ +L DR   SS AYQG         L SL  
Sbjct: 62  AFETELLIMYAARSQLMHNVITPALDKGQWVLADRHDLSSQAYQGGGRGISSNTLASLSS 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + ++ + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  ++++A 
Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYVELA- 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           N  +    VD+  S   V  +I N++    +
Sbjct: 175 NDDNTIKTVDANQSIDKVHRDITNVLHSFFE 205


>gi|21674136|ref|NP_662201.1| thymidylate kinase [Chlorobium tepidum TLS]
 gi|25453084|sp|Q8KCU7|KTHY_CHLTE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21647295|gb|AAM72543.1| thymidylate kinase [Chlorobium tepidum TLS]
          Length = 214

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 4/213 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ISFEGI+GAGK+T +  LKR+LQ +  +V   REPGGTP AE  R +LL    D    
Sbjct: 1   MLISFEGIDGAGKSTQVMKLKRYLQERGREVLALREPGGTPVAEEIRELLLERRND-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++FAA+R + V+ VI+PAL     ++ DRF DS+ AYQG         L  +  I+
Sbjct: 60  VGELLLFAASRAELVQQVIQPALENDSDVILDRFFDSTTAYQGYGRGLDLDMLAEINRIA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              ++PD T  LDL  +  L R  +  SL    ES  LD  E   +  + + R+ +  I 
Sbjct: 120 SCRLVPDVTFYLDLTPEDALMRKFSEKSLPLAFESEELDRMENSGLDFYRRVREGYHKIG 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P+R  I+D+  S   +   I++ +  L  K
Sbjct: 180 GENPNRIIIIDALLSPSEIHRKIISSIDALCTK 212


>gi|309782015|ref|ZP_07676745.1| dTMP kinase [Ralstonia sp. 5_7_47FAA]
 gi|308919081|gb|EFP64748.1| dTMP kinase [Ralstonia sp. 5_7_47FAA]
          Length = 205

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + LQ K       V VTREPGGTP  E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+    Q + P  TI+ DL  +I   R+       ++   D FE +      + R  +L
Sbjct: 119 VLERWVQQGLQPTKTILFDLAPEIAAARLA------DARTPDKFEAESAQFFLRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A  +PDR  ++++      +  ++ N++  L
Sbjct: 173 RRAAAEPDRFVVLNANRERADIQKDLENLLATL 205


>gi|331672613|ref|ZP_08373402.1| dTMP kinase [Escherichia coli TA280]
 gi|324007852|gb|EGB77071.1| thymidylate kinase [Escherichia coli MS 57-2]
 gi|331070256|gb|EGI41622.1| dTMP kinase [Escherichia coli TA280]
          Length = 213

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMGAIRTTVTHWVKE 210


>gi|297563869|ref|YP_003682842.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|296848318|gb|ADH70336.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 707

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI  EG EGAGK+T +  L  +L+ + ++V  TR+PG T      R +LL       
Sbjct: 480 AGAFIVVEGGEGAGKSTQVRELTVWLRDQGFEVIGTRQPGATKLGMRLRGLLLDRENSHI 539

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++AA + DHV+  I PAL  G +++ DR++DS  AYQG         +  + +
Sbjct: 540 TPRAEVLLYAADKADHVQQEILPALRRGAVVISDRYVDSLLAYQGSGRDLSSDEIRRISD 599

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + Q ++PD T++LD+  + GL R+            D  E +    H++ R+ FL++AR
Sbjct: 600 WATQGLVPDLTVLLDVRPEDGLSRL--------GGPADRIEGEPAEFHDRVRRGFLELAR 651

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P+R  ++D+      +   I   V  L+
Sbjct: 652 AAPERYLVLDAREPQDRITREIQRRVRSLL 681


>gi|149201816|ref|ZP_01878790.1| thymidylate kinase [Roseovarius sp. TM1035]
 gi|149144864|gb|EDM32893.1| thymidylate kinase [Roseovarius sp. TM1035]
          Length = 208

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF+SFEGI+G+GK+T    L   L+ K  DV +TREPGG+P AE  R ++L    D +
Sbjct: 4   QGLFLSFEGIDGSGKSTQARRLAETLRAKGRDVVLTREPGGSPGAEEIRRLVLEGDKDRW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E VI PAL  G +++CDRF DS+  YQG   +     +D L  
Sbjct: 64  SAETEILLFTAARRDHLERVIAPALARGAVVICDRFADSTRMYQGLGRADLRGIVDQLHA 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T+++D+   +GL R  +R           FE     +  + R  FL +++
Sbjct: 124 LMI-GREPDLTVLIDIDPGVGLGRALSRGGDEA-----RFESFGEGMQARMRTGFLALSQ 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++D A    +VA ++  +V   +
Sbjct: 178 EFPARFTVIDGARDMDAVAEDVARVVQAHL 207


>gi|290560588|pdb|3LV8|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of A Thymidylate
           Kinase (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str.
           N16961 In Complex With Tmp, Thymidine-5'-Diphosphate And
           Adp
 gi|297343231|pdb|3N2I|A Chain A, 2.25 Angstrom Resolution Crystal Structure Of A
           Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor
           Str. N16961 In C With Thymidine
 gi|297343232|pdb|3N2I|B Chain B, 2.25 Angstrom Resolution Crystal Structure Of A
           Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor
           Str. N16961 In C With Thymidine
          Length = 236

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   LQ+   D    TREPGGT  AE  R ++     
Sbjct: 25  MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 83

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 84  GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 143

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 144 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 197

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  D   ++D+A S + V  +I   + + + +
Sbjct: 198 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 232


>gi|238897674|ref|YP_002923353.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259494273|sp|C4K3R2|KTHY_HAMD5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229465431|gb|ACQ67205.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 210

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 11/216 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLL--SCGV 59
            G FI  EG+EGAGK+T ++ +++FL+  K  DV  TREPGGT  +E  RH++   S   
Sbjct: 2   KGKFIVIEGLEGAGKSTAVNTVQQFLRHFKIQDVICTREPGGTALSEEIRHLIKKKSQNE 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    +AE ++  AAR+  +EN+I+PAL  G  ++ DR   SS AYQG     +  F+ S
Sbjct: 62  EILTDKAELLLLYAARVQLLENIIKPALSSGTWVIGDRHDLSSQAYQGGGRGIKSEFIKS 121

Query: 120 LQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           L + ++     PD T+ LDLP ++GL+R + R        LD  E++ ++  E+ R  +L
Sbjct: 122 LADFTLGSSFRPDLTLYLDLPPELGLQRARKR------GHLDRIEQQSLVFFERIRARYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++  + P R  ++D++   + V  +I N +  L++K
Sbjct: 176 ELTYDDP-RIKMIDASKPIKKVTVDIQNALLSLLEK 210


>gi|84393882|ref|ZP_00992625.1| thymidylate kinase [Vibrio splendidus 12B01]
 gi|84375479|gb|EAP92383.1| thymidylate kinase [Vibrio splendidus 12B01]
          Length = 210

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+     D+  TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKAAGVADIVNTREPGGTVLAEKMRSLVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++     E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG         ++
Sbjct: 61  GEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARTTME 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+E ++    PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 SLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +IA    D   ++++    + VA +I   +   + K+
Sbjct: 175 EIAGQD-DSVLVINAQQEIEQVAADIKVALSAWLNKQ 210


>gi|323140332|ref|ZP_08075264.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067]
 gi|322415190|gb|EFY05977.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067]
          Length = 211

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 10/213 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEGI+GAGKTT   L  + L+ + YDV  +REPGGT  AE  R ++L   +   
Sbjct: 2   RGFFITFEGIDGAGKTTQQHLAAQALREQGYDVLESREPGGTQLAEKVRALVLDPEL-PL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               + +++ AAR +HV+ ++RPAL  GKI++CDRF DS+  YQG         +  L+ 
Sbjct: 61  TTATQTLLYLAARSEHVDKLLRPALEAGKIIICDRFNDSTLVYQGLAQGKAPEEIAQLRR 120

Query: 123 ---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               +   + PD T++ D      L R Q R         D +E++ +   ++ R  FL 
Sbjct: 121 LGAFATGGLEPDLTLVFDADPAELLARRQQR------GVQDRYEQQGLEFQQRLRAGFLQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A  +P R  ++D+  + Q V   +L ++  ++
Sbjct: 175 LAEAEPQRLQVIDALGTQQEVTAKVLQVIGRVI 207


>gi|114762660|ref|ZP_01442094.1| thymidylate kinase [Pelagibaca bermudensis HTCC2601]
 gi|114544570|gb|EAU47576.1| thymidylate kinase [Roseovarius sp. HTCC2601]
          Length = 208

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 6/207 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFISFEGI+G+GK+T   LL   L+    +V +TREPGG+P AE  R ++L    + +
Sbjct: 5   TGLFISFEGIDGSGKSTQARLLAEHLRSTGREVVLTREPGGSPGAEEIRALVLQGDPERW 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  IRPAL  G  ++CDRF DS+  YQG         +D+L  
Sbjct: 65  SAETELLLFTAARRDHLERTIRPALARGATVICDRFADSTRMYQGLSRGDLRGAVDTLHA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +  V PD T+++D+  +          +   +   + FE   + + +K R  FL +A 
Sbjct: 125 LMI-GVEPDLTLLIDMDPE-----AALARAKARATAEERFEDFGLPLQQKMRAGFLALAA 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
               R  IVD   + ++VA ++   + 
Sbjct: 179 EFSGRFRIVDGNRAPEAVAQDVRAALQ 205


>gi|218549175|ref|YP_002382966.1| thymidylate kinase [Escherichia fergusonii ATCC 35469]
 gi|226732661|sp|B7LT40|KTHY_ESCF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|218356716|emb|CAQ89344.1| thymidylate kinase [Escherichia fergusonii ATCC 35469]
 gi|324113893|gb|EGC07867.1| thymidylate kinase [Escherichia fergusonii B253]
 gi|325497596|gb|EGC95455.1| thymidylate kinase [Escherichia fergusonii ECD227]
          Length = 213

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT  +++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVETLEQLGIREMIFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITEKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGVDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                    +D+  S + V  +I   V   V+++ +
Sbjct: 179 AQDAS-IRTIDATQSLECVMADIRQTVTTWVKEQGA 213


>gi|315283971|ref|ZP_07871975.1| thymidylate kinase [Listeria marthii FSL S4-120]
 gi|313612387|gb|EFR86525.1| thymidylate kinase [Listeria marthii FSL S4-120]
          Length = 208

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +FI+  G +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1   MKA-IFITXXGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +
Sbjct: 60  EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  +  +
Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  PDR   VD+  + + +   IL  +   +
Sbjct: 176 IKMFPDRFMRVDATKTPEEITETILADILRQL 207


>gi|311065067|ref|YP_003971793.1| thymidylate kinase [Bifidobacterium bifidum PRL2010]
 gi|310867387|gb|ADP36756.1| Tmk Thymidylate kinase [Bifidobacterium bifidum PRL2010]
          Length = 250

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 15/209 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------- 55
           +GLFISFEG++G GKTT +  L+ +L+    +V VTREPGGT    + R +LL       
Sbjct: 8   TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLRELGDAA 67

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +    AEA++FAA R  HV  V+RPAL  G +++ DR+LDSS AYQ         
Sbjct: 68  EADGTDIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQAGGRELTAD 127

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +  L   +   +MP  T +LD+      +R+Q+          D  E       ++ RQ
Sbjct: 128 DVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQH--------DADRMESAGDEFQQRTRQ 179

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            FLD+A ++P R  ++D+A   ++V  +I
Sbjct: 180 AFLDLAGHEPGRFRVIDAAWPIEAVWEHI 208


>gi|323967039|gb|EGB62465.1| thymidylate kinase [Escherichia coli M863]
 gi|327253496|gb|EGE65134.1| thymidylate kinase [Escherichia coli STEC_7v]
          Length = 213

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + ++A       H +D+    +SV   I   V   V++
Sbjct: 174 YQELAAQDKS-IHTIDATQPLESVMDAIRTTVTNWVKE 210


>gi|257454679|ref|ZP_05619935.1| thymidylate kinase [Enhydrobacter aerosaccus SK60]
 gi|257447989|gb|EEV22976.1| thymidylate kinase [Enhydrobacter aerosaccus SK60]
          Length = 213

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 80/207 (38%), Positives = 109/207 (52%), Gaps = 10/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FISFEG EG GK+T I+ L  +L  +  D   TREPGG+P AE  R +LL         
Sbjct: 12  KFISFEGTEGVGKSTLIANLAAYLTAQGIDFIQTREPGGSPFAEQLRAMLLDPATT-MTE 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEI 123
           ++E ++  AAR DHV  VI PAL +G+ +LCDRF DS+ AYQG          L  ++ +
Sbjct: 71  DSELLLMFAARADHVAQVILPALAQGQWVLCDRFTDSTIAYQGFGRKQGDRAELSKIELL 130

Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
               V  MPD TI LDLPV  G+ R +NR        LD FE+  +   E+  Q F   A
Sbjct: 131 IRHFVAKMPDMTIWLDLPVTEGMSRAKNR------GKLDRFEQNQLAFFERVHQGFAYQA 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +P R   +D+  +   V   +L  +
Sbjct: 185 QQEPQRVKRIDAQGTPDEVLAKVLTQL 211


>gi|304390265|ref|ZP_07372219.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315657530|ref|ZP_07910412.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|304326747|gb|EFL93991.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|315492002|gb|EFU81611.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 239

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF++FEG +G GKTT I+    +++ + +DV  TREPGGT    A R +LL  G  + 
Sbjct: 30  QGLFVAFEGCDGVGKTTQITRAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DV 87

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA++FAA R  HV  +I PA+ +GK+++ DR+L SS AYQG         +  L  
Sbjct: 88  SPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSL 147

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   ++P+ T++LDL  ++  +R     SL      D  ER  +   ++ R+ FL ++ 
Sbjct: 148 WATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSE 204

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            Q D   +VD++     +AT +   + +L+
Sbjct: 205 GQ-DTWLVVDASLPVAEIATQVRLRLAQLL 233


>gi|224283541|ref|ZP_03646863.1| Thymidylate kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|310288198|ref|YP_003939457.1| Thymidylate kinase [Bifidobacterium bifidum S17]
 gi|313140695|ref|ZP_07802888.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|309252135|gb|ADO53883.1| Thymidylate kinase [Bifidobacterium bifidum S17]
 gi|313133205|gb|EFR50822.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171]
          Length = 244

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 15/209 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           +GLFISFEG++G GKTT +  L+ +L+    +V VTREPGGT    + R +LL    D  
Sbjct: 2   TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLREPGDAA 61

Query: 61  -----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +    AEA++FAA R  HV  V+RPAL  G +++ DR+LDSS AYQ         
Sbjct: 62  EADGADIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQAGGRELTAD 121

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +  L   +   +MP  T +LD+      +R+Q+          D  E       ++ RQ
Sbjct: 122 DVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQH--------DADRMESAGDEFQQRTRQ 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            FLD+A ++P R  ++D+A   ++V  +I
Sbjct: 174 AFLDLAGHEPGRFRVIDAAWPIEAVWEHI 202


>gi|182678512|ref|YP_001832658.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634395|gb|ACB95169.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 237

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 115/212 (54%), Gaps = 1/212 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG EG GK+T    L    + +      TREPGG+P AE  R +LLS  +  
Sbjct: 20  TRGFFITLEGGEGTGKSTQARKLVARFEAQGLRAIATREPGGSPNAEILRDILLSGVIKP 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AEA++F+AAR+DH++ VI+PAL  G  ++ DRF DS+  YQG   +     L  L+
Sbjct: 80  LGPLAEALMFSAARIDHLDQVIKPALAAGTTVVSDRFADSTRVYQGVAGNLDPHRLTLLE 139

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI 180
           +  +   +PD T++LDL  + GL R   R +  +S    D FE +D+  H + R+ F  +
Sbjct: 140 QAVLNGTVPDLTLVLDLAPETGLARAAARRANIDSGDGPDRFESEDLTYHRRLREAFRAL 199

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            + +P RC ++D+  S   V   +   + + +
Sbjct: 200 PKREPGRCLLIDADASADIVTERLWTAIQQRL 231


>gi|323175251|gb|EFZ60864.1| thymidylate kinase [Escherichia coli LT-68]
          Length = 213

 Score =  235 bits (601), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  +E VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLIETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +L++A       H +D+    ++V   I   V   V++
Sbjct: 174 YLELAAKDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210


>gi|170289496|ref|YP_001739734.1| dTMP kinase [Thermotoga sp. RQ2]
 gi|238688806|sp|B1L821|KTHY_THESQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|170176999|gb|ACB10051.1| dTMP kinase [Thermotoga sp. RQ2]
          Length = 197

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 15/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T I LL ++L+++   V + REPGGT   E  R +LL    +E   
Sbjct: 1   MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILL---EEEVTP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A+R   V   I+  L EG  +L DR+ DSS AYQG   +     ++ L +++
Sbjct: 58  KAELFLFLASRNLLVTE-IKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDLA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  +D+ V+  LKR            L+ FE++     E  R+ +L +AR  
Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKR--EFLEHVREGYLVLAREH 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P+R  ++D   S + +  +++  V  
Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVER 191


>gi|241663065|ref|YP_002981425.1| thymidylate kinase [Ralstonia pickettii 12D]
 gi|240865092|gb|ACS62753.1| thymidylate kinase [Ralstonia pickettii 12D]
          Length = 205

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G FI+FEGI+GAGK+TH++   + LQ K       V VTREPGGT   E  R VLL   
Sbjct: 2   TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTSLGERLREVLLH-- 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E EA++  A R +H+  VI+PAL  G  ++ DRF D+++AYQG         L+
Sbjct: 60  -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+    Q + P  TI+ DL  +I   R+       ++   D FE +      + R  +L
Sbjct: 119 VLERWVQQGLQPTKTILFDLAPEIAAARLA------DARTPDKFEAESAQFFLRTRAEYL 172

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             A  +PDR  ++++      +  ++ N++  L
Sbjct: 173 RRAAAEPDRFVVLNANRERADIQKDLENVLATL 205


>gi|148272108|ref|YP_001221669.1| hypothetical protein CMM_0928 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166221738|sp|A5CPG8|KTHY_CLAM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147830038|emb|CAN00966.1| tmkA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 211

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+FI+ EG +G GK+T  +LL+ +L+ + ++V VTREPGG+      R ++L       
Sbjct: 2   TGVFITLEGGDGVGKSTQSALLRGWLEDEGHEVVVTREPGGSELGVEIREIVLHRRG-HI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA+++AA R  HVE V+RPAL  G ++L DR+LDSS AYQG         +  L  
Sbjct: 61  APRAEALLYAADRAHHVETVVRPALDRGAVVLQDRYLDSSVAYQGAGRVLDAGEIRELSL 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + Q ++PD T++LDL       R+    +       D  E +    HE+ RQ FL +A 
Sbjct: 121 WAAQGLLPDLTVLLDLDQAAARVRLDAART-----RFDRLESERADFHERVRQAFLGLAG 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+R  +VD+A   + +A  I      L+
Sbjct: 176 AEPERFLVVDAARPREEIAAAIRTRAQALI 205


>gi|319898025|ref|YP_004136222.1| thymidylate kinase [Haemophilus influenzae F3031]
 gi|317433531|emb|CBY81914.1| thymidylate kinase [Haemophilus influenzae F3031]
          Length = 219

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKYETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A+AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTAKAELLMLYAARVQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  +    PD TI LD+   +GL R + R        LD  E+ D+    + R  +L + 
Sbjct: 131 ETVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLGFFHRTRARYLALV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++    + V  +I + V   
Sbjct: 185 KDNP-KAVVINAEQRIELVQADIESAVKNW 213


>gi|171463583|ref|YP_001797696.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171193121|gb|ACB44082.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 211

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 79/208 (37%), Positives = 116/208 (55%), Gaps = 16/208 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           ++G FISFEGI+GAGK+THI   +  +Q +  N +V +TREPGGT   E  R++LL    
Sbjct: 4   HTGYFISFEGIDGAGKSTHIDAFRNLIQERYPNIEVVMTREPGGTVLGEQLRNLLLD--- 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                E EA++  AAR +H+  VI+PAL  GKI++ DRF D+S+AYQG         L+ 
Sbjct: 61  TPMNLETEALLMFAARREHLSQVIKPALTAGKIIISDRFTDASFAYQGGGRGLSLAKLND 120

Query: 120 LQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           L+           + P+ TI+ DLP DI   R             D FE+ D+   E+ R
Sbjct: 121 LERWVQGQPDGSILQPNLTILFDLPGDIAEARRSK------VHTPDKFEKMDLSFFERVR 174

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVAT 202
           Q +L  A++ PDR H+VD+  + +++  
Sbjct: 175 QEYLRRAKDDPDRFHLVDATQTPEAIWN 202


>gi|139439946|ref|ZP_01773283.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC
           25986]
 gi|133774712|gb|EBA38532.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC
           25986]
          Length = 227

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 6/204 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG++GAGK+T   LL R L+   Y V   REPGGT  +E  R +LL       G  
Sbjct: 10  FITLEGVDGAGKSTQARLLARALELAGYQVVSLREPGGTAISEKIRALLLDPANTAMGDT 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E +++ AAR   V  VI PAL  GK++LCDRF DS+  YQ   D      +     ++V
Sbjct: 70  CELLLYEAARAQLVHEVIAPALAAGKVVLCDRFYDSTTCYQAFADGLDRQMVRDANNLAV 129

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               P  T++  +  +    R+ +R         D  E K +   E+  Q F  IA  +P
Sbjct: 130 AGTHPALTLVYHITPEQAALRMADR------GAADRMEAKGMAFQERVYQGFCAIAAEEP 183

Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209
           +R  ++D+  + + V    +  V 
Sbjct: 184 NRVKLIDATATIEEVFAKTVEQVR 207


>gi|264677746|ref|YP_003277652.1| thymidylate kinase [Comamonas testosteroni CNB-2]
 gi|262208258|gb|ACY32356.1| thymidylate kinase [Comamonas testosteroni CNB-2]
          Length = 229

 Score =  235 bits (600), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 73/220 (33%), Positives = 111/220 (50%), Gaps = 21/220 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ GLFISFEGI+GAGK++HI  L +  + +   V +TREPGGTP AE  R ++L    D
Sbjct: 5   LSKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLH---D 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 EA++  AAR DH+  VI PAL  G++++ DRF D+++AYQG         L +L
Sbjct: 62  AMDPLTEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSLEQLSAL 121

Query: 121 QEISVQEV------------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           + ++                 PD T+  DLP ++  +R+        +   D FE +   
Sbjct: 122 ERMAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAERLAT------ARVPDRFEAQPGE 175

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +  Q + + AR  P R   +D+  S  +V   I   V
Sbjct: 176 FFARVAQGYAERARTAPQRFVRIDAHASRHAVWQQITQAV 215


>gi|85713264|ref|ZP_01044288.1| Thymidylate kinase [Idiomarina baltica OS145]
 gi|85692908|gb|EAQ30882.1| Thymidylate kinase [Idiomarina baltica OS145]
          Length = 205

 Score =  234 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 7/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F+  EG+EGAGK++ ++ +   LQ K       REPGGTP AEA R ++     ++  
Sbjct: 3   GKFVVIEGLEGAGKSSAMASVVSHLQAKGIRTETVREPGGTPMAEAIRSLVKQRWEEQVQ 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  A+R+  V+ VI PAL +G  ++ DR   SS AYQG         L+ L++I
Sbjct: 63  PATELLLMYASRVQLVKTVIEPALEQGAWVIGDRHDLSSQAYQGGGRELGAELLEKLKDI 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++   +PD T+ LD+  + GL+R + R        LD  E +D+    + R  +L++A+ 
Sbjct: 123 ALGSFVPDLTLYLDVDEETGLQRARGR------GELDRIEEEDIEFFRRTRTRYLELAKR 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+   I+++     +V   IL  + E +
Sbjct: 177 DPN-IVIINANQEMLNVHQAILRALEEHL 204


>gi|315126343|ref|YP_004068346.1| thymidylate kinase [Pseudoalteromonas sp. SM9913]
 gi|315014857|gb|ADT68195.1| thymidylate kinase [Pseudoalteromonas sp. SM9913]
          Length = 208

 Score =  234 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 110/209 (52%), Gaps = 7/209 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI  EG+EGAGK+T I+L + FL   + D    REPGGTP AE+ R ++ +   +E 
Sbjct: 2   KPKFIVIEGLEGAGKSTAIALCQDFLNHHHIDFINVREPGGTPLAESLRTLVKAEHQEEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR   + NVI PAL +G+ +L DR   SS AYQG         L SL  
Sbjct: 62  AFETELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSS 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + ++ + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  ++++A 
Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYIELA- 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           N  D    VD+  S   V  +I N++   
Sbjct: 175 NDDDSIKTVDANQSIDKVHRDITNVLRTF 203


>gi|149184555|ref|ZP_01862873.1| thymidylate kinase [Erythrobacter sp. SD-21]
 gi|148831875|gb|EDL50308.1| thymidylate kinase [Erythrobacter sp. SD-21]
          Length = 209

 Score =  234 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG EG GK+T   LL+  L+++  +V +TREPGGTP AEA R +LL    +
Sbjct: 1   MRKGKFIAFEGGEGMGKSTQARLLRDALEQRGIEVELTREPGGTPGAEAIREMLLHPPGE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +GA+AEA++FAAAR DHV  +IRPA+  G+ ++CDRFLDSS AYQG         +  L
Sbjct: 61  GWGAQAEALLFAAARADHVARLIRPAVEAGRWVVCDRFLDSSRAYQGSAGELGDEQVRKL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            EI    ++PD TI++    D    R++ R    +    D    +D   H    + F   
Sbjct: 121 HEIGTGGLLPDLTIVIGAHSDEVSARLRAR----DGDTSDAIGGRDETYHRSVNKAFERF 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +P+R   +D + S + V   I+  +  L+
Sbjct: 177 AEEEPNRFARIDGSGSIEDVHVRIMTALAGLL 208


>gi|57641338|ref|YP_183816.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
 gi|73920827|sp|Q5JH21|KTHY_PYRKO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|57159662|dbj|BAD85592.1| thymidylate kinase [Thermococcus kodakarensis KOD1]
          Length = 205

 Score =  234 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 119/216 (55%), Gaps = 18/216 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
           +FI  EGI+GAGK+T   LL  + + + Y+V +T+EP  TP  +  R ++L+ G +    
Sbjct: 1   MFIVLEGIDGAGKSTQAKLLAEWFENRGYEVVLTKEPTDTPFGKLIRRLVLTGGKEGIID 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +   EAEA++FAA R +HV+ +I+P+L  GK+++ DR+  SS AYQ  R     L L+
Sbjct: 61  GAKISHEAEALLFAADRAEHVDKLIKPSLEAGKVVISDRYFYSSLAYQWARG----LDLE 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L +++   V PD   +LDLPV   + R+++R    E   +         +  K R+ +L
Sbjct: 117 WLIDLNRFAVKPDIVFLLDLPVKESMNRIRSRKVKSEFDKI-------FELQRKVRENYL 169

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A   P+   I+++    ++V   I+ ++  L+ +
Sbjct: 170 KLAEMFPE-MKIINAMEDVETVHNQIIALIETLLGE 204


>gi|300716239|ref|YP_003741042.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661]
 gi|299062075|emb|CAX59191.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661]
          Length = 210

 Score =  234 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 9/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62
            FI  EG+EGAGKTT   ++   L+ +   D+  TREPGGTP AE  R ++      +  
Sbjct: 4   KFIVIEGLEGAGKTTARDVVVATLREQGISDIVFTREPGGTPLAEKLRDLIKQGIDGERV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         +  L+ 
Sbjct: 64  TDQAELLMLYAARVQLVENVIKPALASGAWVVGDRHDLSSQAYQGGGRGMDIALMSQLKH 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + E  PD TI LD+  +IGL+R + R        LD  E++ +    + RQ +L++A 
Sbjct: 124 SVLGEFAPDMTIYLDVTPEIGLQRARAR------GELDRIEQESLNFFIRTRQRYLELAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +   R   VD+  S + V+ +I  ++   ++++
Sbjct: 178 SD-SRIQTVDATQSIEQVSASIRQVLVAWLKEQ 209


>gi|88705167|ref|ZP_01102879.1| Thymidylate kinase [Congregibacter litoralis KT71]
 gi|88700862|gb|EAQ97969.1| Thymidylate kinase [Congregibacter litoralis KT71]
          Length = 244

 Score =  234 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 6/199 (3%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T +S ++  L+    D+  TREPGGT   E  R  LL+         AE ++  A
Sbjct: 44  GAGKSTAMSYIEERLRDAGVDLICTREPGGTSLGEQLRETLLAPTEAGIAPLAELLMMFA 103

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
           AR  H+   I PAL  G+ +LCDRF D++YAYQG   +     +  L+E    ++ PD T
Sbjct: 104 ARAQHLSECILPALRRGQWVLCDRFTDATYAYQGAGRNMGEAPVALLEEFVQGDLRPDVT 163

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           ++LD+P D+GL R + R        LD FE +D+   E+ RQ +L  AR    R  I+D+
Sbjct: 164 LLLDVPADLGLSRARGR------GALDRFELEDLAFFERVRQSYLSRARRSSGRYQIIDA 217

Query: 194 AHSFQSVATNILNIVWELV 212
           +     V   +  +V +L+
Sbjct: 218 SAELADVERALQAVVKDLI 236


>gi|292487960|ref|YP_003530837.1| thymidylate kinase [Erwinia amylovora CFBP1430]
 gi|292899179|ref|YP_003538548.1| thymidylate kinase [Erwinia amylovora ATCC 49946]
 gi|291199027|emb|CBJ46138.1| thymidylate kinase [Erwinia amylovora ATCC 49946]
 gi|291553384|emb|CBA20429.1| Thymidylate kinase [Erwinia amylovora CFBP1430]
          Length = 210

 Score =  234 bits (599), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCG- 58
           MN G FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R ++     
Sbjct: 1   MN-GKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMV 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GERVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMS 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++  + +  P  T+ LD+  ++GL+R + R        LD  E++ +    + R  +L
Sbjct: 120 CLKQAVLGDFAPHLTLYLDVTPELGLQRARAR------GELDRIEQESLNFFTRTRDRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A     R   VD+      V   +   + + +Q++
Sbjct: 174 ALASAD-SRIKTVDATQPLAQVTAALQQTLNQWLQEQ 209


>gi|317047712|ref|YP_004115360.1| thymidylate kinase [Pantoea sp. At-9b]
 gi|316949329|gb|ADU68804.1| thymidylate kinase [Pantoea sp. At-9b]
          Length = 211

 Score =  234 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 10/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58
           M S  FI  EG+EGAGKTT    +   L+ +  D +  TREPGGTP AE  R ++     
Sbjct: 1   MKS-KFIVIEGLEGAGKTTARDAVVEVLREQGIDDLVFTREPGGTPLAEQLRVLVKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEQVTDKAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDTQLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  +    PDCT+ LD+  +IGL+R + R        LD  E++ +   E+ R+ +L
Sbjct: 120 TLRDAVLGAFRPDCTLYLDVTPEIGLQRARAR------GELDRIEQESLRFFERTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +A   P     +D+  +   V  +I   +   +
Sbjct: 174 ALAAADPS-IITIDATQTLPEVTASIKAAIHHWL 206


>gi|261253405|ref|ZP_05945978.1| thymidylate kinase [Vibrio orientalis CIP 102891]
 gi|260936796|gb|EEX92785.1| thymidylate kinase [Vibrio orientalis CIP 102891]
          Length = 209

 Score =  234 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           M +  FI  EG+EGAGK++ I+ +   L++   D    TREPGGT  AE  R ++     
Sbjct: 1   MTNAKFIVIEGLEGAGKSSAINAVLETLKQSGVDAITNTREPGGTALAEKLRTLVKQEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++     E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 61  GEQLQDMTELLLMYAARVQLVENVIKPALTSGTWVVGDRHDMSSQAYQGGGRKIPAATML 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD TI LD+   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 ALKQTTLGDFKPDLTIYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +A    +   +V++      VA +I N++   ++
Sbjct: 175 QLAEQD-ESVVVVNAEQDIDKVAADISNVLTSWMK 208


>gi|308235275|ref|ZP_07666012.1| thymidylate kinase [Gardnerella vaginalis ATCC 14018]
 gi|311114155|ref|YP_003985376.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019]
 gi|310945649|gb|ADP38353.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019]
          Length = 233

 Score =  234 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 10/212 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +N GLFISFEGI+G GKTT +  L+ FLQ +  +V VTREPGGTP  E  R++LL  G  
Sbjct: 13  LNKGLFISFEGIDGVGKTTQVEALRDFLQARGLEVVVTREPGGTPLGEQLRNILLHGGA- 71

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA++FAA R  H   +I PAL  G +++ DR++DSS AYQ          +  L
Sbjct: 72  -ISARTEALLFAADRAQHAAQIIIPALRRGAVVITDRYIDSSLAYQSGGRELTMQDVRDL 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +   + P+ T +LD+       R+            D  E   +    + R+ FLD+
Sbjct: 131 SEWASNCLWPNRTYLLDMSEKDAAVRLH--------GQADRMESAGLDFARRTREAFLDL 182

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A+    R  ++D+      ++  I   + EL+
Sbjct: 183 AKQNAQRFCVLDATLPACDLSKLIAKDMCELM 214


>gi|37520247|ref|NP_923624.1| thymidylate kinase [Gloeobacter violaceus PCC 7421]
 gi|46576425|sp|Q7NMT7|KTHY_GLOVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|35211240|dbj|BAC88619.1| thymidylate kinase [Gloeobacter violaceus PCC 7421]
          Length = 212

 Score =  234 bits (598), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG EG GKTT ++LL  +L+++ + V  TREPGGT    + R +LL     E   
Sbjct: 1   MFITFEGGEGCGKTTQLTLLGDWLEKRCHRVVRTREPGGTALGRSLRGLLLD-ARSEITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++A  R +H+  V+RPAL  G  +LCDRF DS+ AYQG         ++ L  I+
Sbjct: 60  TAELLLYATDRAEHLARVVRPALASGAAVLCDRFSDSTVAYQGYGRGLDLGLIERLNAIA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++PD T  L L    GL     R         D  E + +  H++    F  +A   
Sbjct: 120 TGGLLPDLTFWLKLDPQAGL----VRRLASNGNTPDRIEAETLAFHQRVHMGFAALANRY 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           P R   VD+  S ++ A  I + V   + +  S L
Sbjct: 176 PGRIRPVDAGLSVEATAEQIRSAVDVFLNENQSKL 210


>gi|307298997|ref|ZP_07578799.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915422|gb|EFN45807.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 209

 Score =  234 bits (598), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 7/211 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FIS EGI+G GKTT I LL  +L + + +  + REPGGT A E  R +LL      F  
Sbjct: 1   MFISVEGIDGCGKTTQIKLLAEYLSQLDVEFIIVREPGGTKAGEEIRDILLHKEYHLFS- 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E+E ++F AAR   V  VIRP L +GK ++ DRF+DSS AYQG         + ++   +
Sbjct: 60  ESELLLFMAARAQIVREVIRPELEKGKTVIADRFMDSSVAYQGVGRRLGREIVQAMNAFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           V   +PD T  +D+P D+ + R++           D  E ++    E+ R+ +  +    
Sbjct: 120 VGGTVPDITFYIDVPTDVAISRMRKEKKN------DKIEMENFDFFERVREGYEKLMVEN 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +R   +D   S + V T+I   +  L  K+
Sbjct: 174 RERFVRIDGKQSEEKVQTDIRKSLRVLFHKK 204


>gi|213864741|ref|ZP_03386860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
          Length = 213

 Score =  234 bits (598), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 112/216 (51%), Gaps = 11/216 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG         L +L+
Sbjct: 65  ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +    PD T+ LD+  ++GLKR + R        LD  E++      + R  +L++A
Sbjct: 125 DAVLGVFSPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                R   +D+     +V  +I   V + VQ++ +
Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213


>gi|331701730|ref|YP_004398689.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929]
 gi|329129073|gb|AEB73626.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929]
          Length = 216

 Score =  234 bits (598), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN G FI+FEG +GAGKT+ ++ +     ++    + VTREPGG   +E  R V+L    
Sbjct: 1   MN-GKFITFEGPDGAGKTSVMNRVIEVFNQEIGDQLLVTREPGGNKISEEIRKVILDREN 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E     EA+++AAAR  H+   I PAL + K++LCDR++DSS AYQG         +  
Sbjct: 60  TEMDYRTEALLYAAARRQHLVETILPALKQNKLVLCDRYVDSSVAYQGAGRQIGMAQVAK 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E + ++++P  TI  D+PVD+GL R+      R+ + +D  + +    H++  + ++ 
Sbjct: 120 MNEFATEKLLPFKTIYFDIPVDVGLDRIA---EHRDRSKIDRLDVETNEFHKRVHEGYMK 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +     DR   +D+      V  + + I+ ++
Sbjct: 177 VRDENADRFISIDATQPINRVVNDTIKIIHQI 208


>gi|271500137|ref|YP_003333162.1| thymidylate kinase [Dickeya dadantii Ech586]
 gi|270343692|gb|ACZ76457.1| thymidylate kinase [Dickeya dadantii Ech586]
          Length = 214

 Score =  234 bits (598), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 10/219 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKT+  +++   L+    D +  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTSAHAVVVETLREFGIDDIVFTREPGGTPLAEKLRTLIKQGVA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VENVIRPAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  EEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGMDPQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++  +    PD T+ LD+P ++GLKR + R        LD  E++ +   E+ R  + 
Sbjct: 120 LLRDTVLGTFRPDLTLYLDIPPELGLKRARQR------GELDRIEQESLAFFERTRARYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +A    +    VD++   + V  +I  ++ + +Q+ + 
Sbjct: 174 QLAAAD-NSIVTVDASRGLEQVNADIRRVLRDWLQQLIG 211


>gi|311279996|ref|YP_003942227.1| thymidylate kinase [Enterobacter cloacae SCF1]
 gi|308749191|gb|ADO48943.1| thymidylate kinase [Enterobacter cloacae SCF1]
          Length = 213

 Score =  234 bits (598), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M+S  +I  EG+EGAGKTT   ++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MHS-KYIVIEGLEGAGKTTARDVVVETLEQMGIRDLLFTREPGGTILAEKLRSLVLDIRS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  GK ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDPQM 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L +L++  + +  PD T+ LD+  ++GL R + R        LD  E++ +    + R  
Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLGRARARGD------LDRIEQESLNFFNRTRAR 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +L++A       H +D+      V   I + V   VQ++ +
Sbjct: 174 YLELAAQDAS-IHTIDATQPLDDVMRAIRDTVTRWVQEQGA 213


>gi|86148586|ref|ZP_01066870.1| thymidylate kinase [Vibrio sp. MED222]
 gi|85833615|gb|EAQ51789.1| thymidylate kinase [Vibrio sp. MED222]
          Length = 210

 Score =  234 bits (597), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+     D+  TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++     E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG         ++
Sbjct: 61  GEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARTTME 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+E ++    PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 SLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +IA    D   ++++    + VA +I   +   + K+
Sbjct: 175 EIAGQD-DSVLVINAQQELEQVAADIKVALSAWLNKQ 210


>gi|218709023|ref|YP_002416644.1| thymidylate kinase [Vibrio splendidus LGP32]
 gi|218322042|emb|CAV18087.1| Thymidylate kinase [Vibrio splendidus LGP32]
          Length = 210

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+     D+  TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++     E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG         ++
Sbjct: 61  GEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARSTME 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+  ++    PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 SLKATTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +IA    D   ++++    + VA +I   +   + K+
Sbjct: 175 EIAGQD-DSVLVINAQQEIEQVAADIKVALSAWLNKQ 210


>gi|110598215|ref|ZP_01386491.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031]
 gi|110340130|gb|EAT58629.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031]
          Length = 212

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 4/212 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L  +L     +V   REPGGT  AE  R +LL    +    
Sbjct: 1   MLITFEGIDGAGKSTQIKKLVSYLADSGREVLTLREPGGTEVAEKIRLILLESRHE-ISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + +  VI+PAL E KI++ DRF DS+ AYQG         L S+  IS
Sbjct: 60  VGELLLFSASRAELIHEVIKPALAENKIVILDRFFDSTTAYQGYGRGIDLELLRSIIAIS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R    ++     +S+ LD  ER  +  ++  RQ +L+I 
Sbjct: 120 TCGITPDITFYLDIKPEEALSRKFSAKSIPLAFDSSELDRMERSGLQFYQNVRQGYLNIL 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +    R   +++    + +   I+ ++ E +Q
Sbjct: 180 KESNGRMFCLNALEKPEEIHRRIIALLHERLQ 211


>gi|260776328|ref|ZP_05885223.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607551|gb|EEX33816.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 209

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 9/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLL-SCG 58
           M    FI  EG+EGAGK+T I+ +   L++   + +  TREPGGT  AE  R ++     
Sbjct: 1   MTQAKFIVIEGLEGAGKSTAINAVLETLKQAGIEQIKNTREPGGTALAEQLRTLVKQDHE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 61  GEELQDMTELLLMYAARVQLVENVIKPALNSGTWVVGDRHDMSSQAYQGGGRQISQHTMT 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD TI LDL   IGL+R + R        LD  E+ D+   ++ R  +L
Sbjct: 121 ALKQTTLGDFKPDLTIYLDLDPRIGLERARGR------GELDRIEKMDMSFFDRTRARYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A+       ++++  + + VA +I   +   +++
Sbjct: 175 ELAQCDSS-VVVINAEQTIELVAQDIKQALRSWLEQ 209


>gi|310767311|gb|ADP12261.1| thymidylate kinase [Erwinia sp. Ejp617]
          Length = 210

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDAIVSELQRHGINDIVFTREPGGTPLAEKLRDLIKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         ++
Sbjct: 60  GERITDSAELLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSLAYQGGGRGMNSDLMN 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++  + +  PD T+ LD+   IGL+R + R        LD  E++ +    + R+ +L
Sbjct: 120 CLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A         +D+    + V   +   + + +Q++
Sbjct: 174 ALASAD-SCIKTIDATRPLEQVTAALQQTLNQWLQEQ 209


>gi|56478513|ref|YP_160102.1| thymidylate kinase [Aromatoleum aromaticum EbN1]
 gi|56314556|emb|CAI09201.1| Thymidylate kinase [Aromatoleum aromaticum EbN1]
          Length = 210

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+FEGI+GAGK++ I+ +   L+ +   V  TREPGGT   E  R        +    
Sbjct: 9   RFITFEGIDGAGKSSQIAAVVALLEARGLCVEQTREPGGTALGERLRE---LLLHEPMHL 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E EA++  AAR +H+   I PAL  G+ ++ DRF D++YAYQ            +L+   
Sbjct: 66  ETEALLMFAARREHLAARILPALAAGRWVVSDRFSDATYAYQVGGRGLDPAKFAALEAWV 125

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD T++ DLP ++   R+         A  D FER+     E+ R  +L+ AR  
Sbjct: 126 HPGFQPDLTLVFDLPPEVAAARLAK-----GGAEPDRFEREQRDFFERVRAAYLERARMA 180

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P R  I+D+  + +S+   +  IV E
Sbjct: 181 PGRIRIIDAGGTAESIRAEVEAIVEE 206


>gi|309972387|gb|ADO95588.1| Thymidylate kinase [Haemophilus influenzae R2846]
          Length = 219

 Score =  234 bits (597), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L +    DV  TREPGGTP AE  RH++     + 
Sbjct: 11  KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 71  VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 184

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I   V   
Sbjct: 185 KDNP-KAVMINAEQSIELVQADIERAVKNW 213


>gi|11991874|gb|AAG42374.1|AF294440_6 thymidylate kinase [Xanthomonas albilineans]
          Length = 226

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/200 (37%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----- 59
            F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE  R +LL         
Sbjct: 10  RFVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDMAPSSPET 69

Query: 60  --DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +   AE E ++  AAR  HV  VIRPAL  G  ++ DRF DSSYAYQGE       ++
Sbjct: 70  AVERLSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWI 129

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L+  +V  + P  T++LDL V IG  R   R         D  E +     ++ R  F
Sbjct: 130 ADLERRAV-GLQPGLTLLLDLDVQIGRARTSGRDL-----WPDRIESEQDDFFQRVRAGF 183

Query: 178 LDIARNQPDRCHIVDSAHSF 197
              A   P R  ++D++   
Sbjct: 184 RQRATQDPQRFRVIDASQPP 203


>gi|304413841|ref|ZP_07395258.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus
           Regiella insecticola LSR1]
 gi|304283561|gb|EFL91956.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus
           Regiella insecticola LSR1]
          Length = 603

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M +G FI  EG+EGAGKTT    + + L+     D+   REPGGTP AE  R ++     
Sbjct: 387 MITGKFIVIEGLEGAGKTTAGETVAQVLRANGINDIVQPREPGGTPVAEKLRELIKQRID 446

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D    +AE ++  AAR+  +ENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 447 SDPLTDKAEVLMLYAARVQLIENVIKPALARGTWVVGDRHDLSSQAYQGGGRDVDSKLMT 506

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  +    PD T+ LD+  + GL RV+ R         D  E++ +    +  + +L
Sbjct: 507 SLRDSLLGSFRPDLTLYLDISPEQGLARVRLR------GSPDRIEQESLAFFTRVHERYL 560

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +     +   ++++A     V+  I   + + ++
Sbjct: 561 KLVAGDSN-IKMINAAQPLAQVSAEIRRELEKWLE 594


>gi|145589149|ref|YP_001155746.1| dTMP kinase [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047555|gb|ABP34182.1| thymidylate kinase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 214

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/206 (37%), Positives = 114/206 (55%), Gaps = 16/206 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G FISFEGI+GAGK+THI   K+ +Q +  + +V +TREPGGTP  E  R++LL      
Sbjct: 9   GFFISFEGIDGAGKSTHIESFKKLMQERYPDREVVMTREPGGTPLGEQLRNLLLDA---P 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E EA++  AAR +H+  +I PAL+ GKI++ DRF D+S+AYQG         L+ L+
Sbjct: 66  MNLETEALLMFAARREHIAQIIEPALLAGKIVISDRFTDASFAYQGGGRGLSLAKLNDLE 125

Query: 122 EISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +          + P+ TI+ DLP +I   R             D FE+ D++  EK RQ 
Sbjct: 126 QWVQGRADGKLLQPNLTILFDLPGEIAQARRSK------VRTPDKFEKLDLVFFEKVRQE 179

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVAT 202
           +L  A   P R H VD+  + +++  
Sbjct: 180 YLRRALEDPSRFHKVDATQTPEAIWN 205


>gi|319787591|ref|YP_004147066.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466103|gb|ADV27835.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1]
          Length = 223

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 12/218 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----- 59
             +S EG EGAGK+T ++ ++  L  + ++V  TREPGGTP AE  R +LL+        
Sbjct: 10  RLVSLEGGEGAGKSTALAAVRELLAARGHEVVQTREPGGTPLAERIRELLLARSAPGQDV 69

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    + E ++  AAR  HV  V+RPAL  G  ++ DRF DSSYAYQG        ++ 
Sbjct: 70  AEPLHPQTELLLMFAARAQHVAEVVRPALERGAFVVSDRFTDSSYAYQGAGRGLDPRWIA 129

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++ +V  + P  T++LDL V  G  R   R         D  E +     E+ R+ F 
Sbjct: 130 DLEQRTV-GMRPGLTLLLDLDVRQGRARTSGRDLF-----PDRIESEQDEFFERVRRGFR 183

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             A+ +P+R  ++D+A   Q+V  ++   V   + ++V
Sbjct: 184 QRAQAEPERFALIDAAQPPQAVGHDVAAAVAAWLDRQV 221


>gi|253996507|ref|YP_003048571.1| thymidylate kinase [Methylotenera mobilis JLW8]
 gi|253983186|gb|ACT48044.1| thymidylate kinase [Methylotenera mobilis JLW8]
          Length = 201

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 9/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EG++GAGK+THI+ + + L  +  +V  TREPGGT   E  R        D    
Sbjct: 4   KFITLEGMDGAGKSTHIADIIKALSARGVEVVSTREPGGTELGERLRE---LLLHDAMHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++  AAR +H+ NVI PAL  G  +L DRF D++YAYQ          ++ L+   
Sbjct: 61  ETETLLMFAARREHIANVIAPALARGAYVLSDRFTDATYAYQCGAKGVLASKIEQLELWV 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + PD T++ D+PV++ ++R+        +   D FER+      + R  +L  A+  
Sbjct: 121 QESLQPDLTLLFDVPVEVSMQRLSA------ARAPDKFERESADFFTRIRNAYLQRAQQN 174

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P R  ++DS      VA +++  +   
Sbjct: 175 PARFKVIDSNRPLDEVAQSVMQAIASF 201


>gi|312796386|ref|YP_004029308.1| Thymidylate kinase [Burkholderia rhizoxinica HKI 454]
 gi|312168161|emb|CBW75164.1| Thymidylate kinase (EC 2.7.4.9) [Burkholderia rhizoxinica HKI 454]
          Length = 218

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 13/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58
            G FI+FEGI+GAGKTTH++     L  +       V VTREPGGTP  EA R +LL   
Sbjct: 15  RGKFITFEGIDGAGKTTHLTWFCDRLSERAARQGASVIVTREPGGTPLGEALRDILL--- 71

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 E EA++  AAR +H+  VI P L  G  +L DRF D+++AYQG         L 
Sbjct: 72  RQPMHLETEALLMFAARREHIAAVIEPTLARGDWVLSDRFTDATFAYQGGGRGLSIDKLQ 131

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++     + PD T++ D+P +    R   R   R     D FE +      + R  +L
Sbjct: 132 VLEQWVQAGLQPDRTVLFDVPTETASAR---RGGAR---APDKFESESDAFFARTRAEYL 185

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                 P R  IVD+  S   V   +  I+  L
Sbjct: 186 RRTAQAPARFAIVDATCSIAEVREQLEAILLTL 218


>gi|310830718|ref|YP_003965819.1| Thymidylate kinase [Paenibacillus polymyxa SC2]
 gi|309250185|gb|ADO59751.1| Thymidylate kinase [Paenibacillus polymyxa SC2]
          Length = 210

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 4/201 (1%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           S EG EGAGK+  I  +K           +TREPGG   AE  R ++L           E
Sbjct: 2   SLEGGEGAGKSLVIQAIKDHFAESGKPYLITREPGGIEIAEKIRTIILEPSHTSMDGRTE 61

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           A+++AAAR  H+   + PA+ +G  ++CDRF+DSS  YQG         +  L + +++ 
Sbjct: 62  ALLYAAARRQHLVEKVFPAINQGTTVICDRFIDSSLVYQGYARGLGFETILELNQFAIEG 121

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            MPD TI LD+   +GL+R+ +R + RE   ++  + + V  HEK    +  +    P+R
Sbjct: 122 CMPDVTIWLDVDPKVGLERI-SRNNERE---VNRLDLESVRFHEKVHMGYQILHAMYPER 177

Query: 188 CHIVDSAHSFQSVATNILNIV 208
            H +D+  + + V  +++ ++
Sbjct: 178 IHKIDANQTPEDVVKDVIKVI 198


>gi|148980539|ref|ZP_01816112.1| thymidylate kinase [Vibrionales bacterium SWAT-3]
 gi|145961192|gb|EDK26507.1| thymidylate kinase [Vibrionales bacterium SWAT-3]
          Length = 210

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN   FI  EG+EGAGK+T I+ +   L+    + +  TREPGGT  AE  R ++     
Sbjct: 1   MNQSKFIVVEGLEGAGKSTAINAIVETLKASGVEELVNTREPGGTVLAEKMRSLVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++     E ++  AAR+  VENVI+PAL  GK +L DR   SS AYQG         ++
Sbjct: 61  GEQLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARTTME 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+  ++ +  PD T+ LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 SLKATTLGDFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +IA    D   ++++    + VA +I   +   + ++
Sbjct: 175 EIAAQD-DSVLVINAEQEIEQVAADIKQALSTWLDQQ 210


>gi|85059043|ref|YP_454745.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans']
 gi|123519602|sp|Q2NU35|KTHY_SODGM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|84779563|dbj|BAE74340.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans']
          Length = 213

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EG+GKT+ I+ +   L+ +   DV  TREPGGTP AEA R ++    G
Sbjct: 1   MNS-KFIVIEGLEGSGKTSAIAQVVDVLREQGIRDVVFTREPGGTPLAEALRTLIKDGVG 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 60  EEPVTDRAELLMLYAARVQLVEGVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDARLLQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  + +  PD T+ LD+P  +GL R + R        LD  E + +   ++ R  + 
Sbjct: 120 TLRDAVLGDFRPDLTLYLDIPPALGLARARAR------GELDRIEVESLAFFDRTRARYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A    DR   +D++    +V+  + + + + ++ +
Sbjct: 174 ALAAAD-DRMVTLDASQPLAAVSAALRHQLTQWLRAQ 209


>gi|257066619|ref|YP_003152875.1| thymidylate kinase [Anaerococcus prevotii DSM 20548]
 gi|256798499|gb|ACV29154.1| thymidylate kinase [Anaerococcus prevotii DSM 20548]
          Length = 209

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I FEG +G+GKTT I+ +K+ L++   +    REPGGTP +E  R +++    ++ 
Sbjct: 2   TGKLIVFEGPDGSGKTTVINEVKKRLKKDQIEYLDFREPGGTPISEKIREIIIDNDNEDM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  E ++FAA+R   +E  IRPAL +GK+++CDRF+ SS  YQG         +  + +
Sbjct: 62  TSRCECLLFAASRAQLIEEKIRPALEKGKLVICDRFVLSSLLYQGVGRGLGIEKVKVIND 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +    D TI  D+     L R +  +S       D  E +D   H K    +LDI  
Sbjct: 122 FATENTKADLTIFFDIDYKTALVRKRANFSA------DRLESEDFDFHRKIFDAYLDITE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              D    VD+  S   V   ++ ++++ +++
Sbjct: 176 RYKDEIKRVDATKSIDEVTDQVMELIYKSLEE 207


>gi|317495399|ref|ZP_07953768.1| thymidylate kinase [Gemella moribillum M424]
 gi|316914458|gb|EFV35935.1| thymidylate kinase [Gemella moribillum M424]
          Length = 208

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 7/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EG +G+GKTT I+    +L +K Y V  TREPGGT  +E  R +L     +  
Sbjct: 2   KGKFITVEGSDGSGKTTFINSATEYLIKKGYKVITTREPGGTVFSEKVRELLFDSSNE-I 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E+++F  +R DH+   I P + EG I++CDRF+DSS AYQ          +  + +
Sbjct: 61  DAKTESLLFCVSRRDHIIKKIIPYVEEGYIVICDRFVDSSIAYQSYGRGLNKQDIIDINK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T+  ++ V+IGL R + R         +  + + +  ++  ++ + +++ 
Sbjct: 121 YTTDGLEPDLTLYFNVDVEIGLSRTKGRDEN------NRMDNESLKFYKDVKRGYDELSN 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +   R  ++D+   ++ V  +   I+   + 
Sbjct: 175 DYKKRIKVIDANQDYEKVEKDAFKILEGFLN 205


>gi|304397225|ref|ZP_07379104.1| thymidylate kinase [Pantoea sp. aB]
 gi|304355374|gb|EFM19742.1| thymidylate kinase [Pantoea sp. aB]
          Length = 210

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   L+ +   D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDAIVATLRARGINDLVFTREPGGTPLAEQLRTLVKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSELMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  + +  PD T+ LD+  DIGL+R + R        LD  E++ +   E+ R  +L
Sbjct: 120 TLRDAVLGDFRPDLTLYLDVTPDIGLQRARAR------GELDRIEQESLRFFERTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A + P     +D+  S + V  ++   +   + ++
Sbjct: 174 TLAADDP-TILTIDATQSLEEVTASLKATLDSWLAEQ 209


>gi|27469219|ref|NP_765856.1| dTMP kinase [Staphylococcus epidermidis ATCC 12228]
 gi|57866011|ref|YP_187716.1| thymidylate kinase [Staphylococcus epidermidis RP62A]
 gi|251809790|ref|ZP_04824263.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875412|ref|ZP_06284284.1| dTMP kinase [Staphylococcus epidermidis SK135]
 gi|293366124|ref|ZP_06612811.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38258101|sp|Q8CQT7|KTHY_STAES RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920830|sp|Q5HRS3|KTHY_STAEQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|27316768|gb|AAO05943.1|AE016751_238 dTMP kinase [Staphylococcus epidermidis ATCC 12228]
 gi|57636669|gb|AAW53457.1| thymidylate kinase [Staphylococcus epidermidis RP62A]
 gi|251806658|gb|EES59315.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295769|gb|EFA88291.1| dTMP kinase [Staphylococcus epidermidis SK135]
 gi|291319718|gb|EFE60077.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329723942|gb|EGG60467.1| dTMP kinase [Staphylococcus epidermidis VCU144]
 gi|329733036|gb|EGG69375.1| dTMP kinase [Staphylococcus epidermidis VCU028]
 gi|329737878|gb|EGG74106.1| dTMP kinase [Staphylococcus epidermidis VCU045]
          Length = 203

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 113/208 (54%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ I  +   L ++ YD+  TREPGG   +E  R ++L    D     
Sbjct: 4   FITFEGPEGAGKTSVIKKVSERLAKE-YDIVTTREPGGVLTSEEIRRIVLDG--DSIDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   I P+L  GKI+LCDR++DSS AYQG         +  L E ++
Sbjct: 61  TEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  +IG +R+     L+ +   +  ++++   HEK  + +  +  + P
Sbjct: 121 NGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEEKAFHEKVIEGYQKVISDNP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R   V++ HS   V       + + ++
Sbjct: 176 HRFIKVNANHSLDKVVEETYQSIIKYLK 203


>gi|300867280|ref|ZP_07111940.1| Thymidylate kinase [Oscillatoria sp. PCC 6506]
 gi|300334757|emb|CBN57106.1| Thymidylate kinase [Oscillatoria sp. PCC 6506]
          Length = 217

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 11/216 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-----NYDVHVTREPGGTPAAEAARHVLLSCG 58
           G  I FEG+EG+GKTT I   + +L  K        + VTREPGGT   +  R +LL  G
Sbjct: 3   GKLIVFEGVEGSGKTTQIERSRLWLLSKENHCKVPQIVVTREPGGTDLGKGLRGLLLESG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE +++AA R  HVE V++P L +G I+LCDRF DS+ AYQG         ++
Sbjct: 63  GENICDRAELLLYAADRAQHVEAVLKPELAKGSIVLCDRFTDSTIAYQGYGRGLSLSLIN 122

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L EI+   +  D T+ LDL V++GL+RV+ R         D  E+ D+  H + +Q F 
Sbjct: 123 QLNEIATLGLQSDLTLWLDLEVEVGLRRVKRR------GVSDRIEQADLEFHRRVQQGFA 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           D+A    DR   VD+  S + V+  I +I    ++ 
Sbjct: 177 DLATANRDRIIRVDANRSEEEVSEEIHHIFTRKLKD 212


>gi|297579520|ref|ZP_06941448.1| thymidylate kinase [Vibrio cholerae RC385]
 gi|297537114|gb|EFH75947.1| thymidylate kinase [Vibrio cholerae RC385]
          Length = 212

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   LQ+   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 60  GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD T+ LD+   +GL+R + R        LD  E+  +   E+ R+ +L
Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMGISFFERARERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  D   ++D+A S + V  +I   + + + +
Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208


>gi|146311269|ref|YP_001176343.1| thymidylate kinase [Enterobacter sp. 638]
 gi|166987703|sp|A4W9B2|KTHY_ENT38 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145318145|gb|ABP60292.1| thymidylate kinase [Enterobacter sp. 638]
          Length = 213

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 11/214 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS---CGVDE 61
           +I  EG+EGAGKTT  +++   L+    + +  TREPGGT  AE  R ++L     G + 
Sbjct: 5   YIVIEGLEGAGKTTARNVVVDTLKELGIEQMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F AAR+  VE VI+PAL EG+ ++ DR   S+ AYQG         L +L+
Sbjct: 65  IDVKAEVLMFYAARVQLVETVIKPALAEGQWVIGDRHDLSTQAYQGGGRGIDQQMLATLR 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + +  P+ T+ LD+  ++GLKR + R        LD  E++ +    + R  +L++A
Sbjct: 125 NAVLGDFRPNLTLYLDVTPEVGLKRARAR------GELDRIEQESLDFFNRTRARYLELA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               D    +D+  S + V  +I   +   +Q++
Sbjct: 179 AQD-DSIRTIDATQSLEGVTRSIRETITAWLQEQ 211


>gi|229819159|ref|YP_002880685.1| thymidylate kinase [Beutenbergia cavernae DSM 12333]
 gi|229565072|gb|ACQ78923.1| thymidylate kinase [Beutenbergia cavernae DSM 12333]
          Length = 210

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 112/211 (53%), Gaps = 10/211 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F+SFEG +GAGKTT + LL  ++++   +V  TREPGGT      R ++L    ++  
Sbjct: 7   GVFVSFEGGDGAGKTTQLELLATWIEQAGREVVRTREPGGTAIGRTLRDLVLHG--EDVD 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  EA+++A  R  HV +++RPAL  G ++L DR++DSS AYQ          +  L   
Sbjct: 65  ARTEALLYATDRAHHVASLVRPALARGAVVLTDRYVDSSLAYQAGGRELAADDVRRLSMW 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +V  +MPD TI+LDL       R+        +A  D  ER     H + R+ +L +A  
Sbjct: 125 AVDGLMPDVTILLDLDPAHLPARL--------TAAPDRLERAGSAFHVRTREAYLGLAAR 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +P+R  ++D+A     +A  +   V   + +
Sbjct: 177 EPERWLVLDAALGRAELAAQVRARVAPRLGR 207


>gi|15642018|ref|NP_231650.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121590849|ref|ZP_01678174.1| thymidylate kinase [Vibrio cholerae 2740-80]
 gi|121728860|ref|ZP_01681870.1| thymidylate kinase [Vibrio cholerae V52]
 gi|147673617|ref|YP_001217543.1| thymidylate kinase [Vibrio cholerae O395]
 gi|153216421|ref|ZP_01950456.1| thymidylate kinase [Vibrio cholerae 1587]
 gi|153819691|ref|ZP_01972358.1| thymidylate kinase [Vibrio cholerae NCTC 8457]
 gi|153822936|ref|ZP_01975603.1| thymidylate kinase [Vibrio cholerae B33]
 gi|153827018|ref|ZP_01979685.1| thymidylate kinase [Vibrio cholerae MZO-2]
 gi|153830262|ref|ZP_01982929.1| thymidylate kinase [Vibrio cholerae 623-39]
 gi|227082143|ref|YP_002810694.1| thymidylate kinase [Vibrio cholerae M66-2]
 gi|229507895|ref|ZP_04397400.1| thymidylate kinase [Vibrio cholerae BX 330286]
 gi|229511870|ref|ZP_04401349.1| thymidylate kinase [Vibrio cholerae B33]
 gi|229519006|ref|ZP_04408449.1| thymidylate kinase [Vibrio cholerae RC9]
 gi|229521928|ref|ZP_04411345.1| thymidylate kinase [Vibrio cholerae TM 11079-80]
 gi|229524026|ref|ZP_04413431.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426]
 gi|229607440|ref|YP_002878088.1| thymidylate kinase [Vibrio cholerae MJ-1236]
 gi|254849103|ref|ZP_05238453.1| thymidylate kinase [Vibrio cholerae MO10]
 gi|255745235|ref|ZP_05419184.1| thymidylate kinase [Vibrio cholera CIRS 101]
 gi|262148995|ref|ZP_06028141.1| thymidylate kinase [Vibrio cholerae INDRE 91/1]
 gi|262167963|ref|ZP_06035663.1| thymidylate kinase [Vibrio cholerae RC27]
 gi|298497954|ref|ZP_07007761.1| thymidylate kinase [Vibrio cholerae MAK 757]
 gi|14285518|sp|Q9KQI2|KTHY_VIBCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|172047643|sp|A5F6P9|KTHY_VIBC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|254808314|sp|C3LNW7|KTHY_VIBCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|9656560|gb|AAF95164.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121547300|gb|EAX57420.1| thymidylate kinase [Vibrio cholerae 2740-80]
 gi|121628868|gb|EAX61326.1| thymidylate kinase [Vibrio cholerae V52]
 gi|124114280|gb|EAY33100.1| thymidylate kinase [Vibrio cholerae 1587]
 gi|126509757|gb|EAZ72351.1| thymidylate kinase [Vibrio cholerae NCTC 8457]
 gi|126519547|gb|EAZ76770.1| thymidylate kinase [Vibrio cholerae B33]
 gi|146315500|gb|ABQ20039.1| thymidylate kinase [Vibrio cholerae O395]
 gi|148874275|gb|EDL72410.1| thymidylate kinase [Vibrio cholerae 623-39]
 gi|149739137|gb|EDM53426.1| thymidylate kinase [Vibrio cholerae MZO-2]
 gi|227010031|gb|ACP06243.1| thymidylate kinase [Vibrio cholerae M66-2]
 gi|227013913|gb|ACP10123.1| thymidylate kinase [Vibrio cholerae O395]
 gi|229337607|gb|EEO02624.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426]
 gi|229340853|gb|EEO05858.1| thymidylate kinase [Vibrio cholerae TM 11079-80]
 gi|229343695|gb|EEO08670.1| thymidylate kinase [Vibrio cholerae RC9]
 gi|229351835|gb|EEO16776.1| thymidylate kinase [Vibrio cholerae B33]
 gi|229355400|gb|EEO20321.1| thymidylate kinase [Vibrio cholerae BX 330286]
 gi|229370095|gb|ACQ60518.1| thymidylate kinase [Vibrio cholerae MJ-1236]
 gi|254844808|gb|EET23222.1| thymidylate kinase [Vibrio cholerae MO10]
 gi|255737065|gb|EET92461.1| thymidylate kinase [Vibrio cholera CIRS 101]
 gi|262023690|gb|EEY42391.1| thymidylate kinase [Vibrio cholerae RC27]
 gi|262031227|gb|EEY49845.1| thymidylate kinase [Vibrio cholerae INDRE 91/1]
 gi|297542287|gb|EFH78337.1| thymidylate kinase [Vibrio cholerae MAK 757]
 gi|327484551|gb|AEA78958.1| Thymidylate kinase [Vibrio cholerae LMA3894-4]
          Length = 212

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   LQ+   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 60  GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  D   ++D+A S + V  +I   + + + +
Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208


>gi|319793761|ref|YP_004155401.1| thymidylate kinase [Variovorax paradoxus EPS]
 gi|315596224|gb|ADU37290.1| thymidylate kinase [Variovorax paradoxus EPS]
          Length = 218

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 14/213 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLF++ EGI+GAGK++H+  ++   + +   V  TREPGGTP AE  R ++L     
Sbjct: 1   MSEGLFLTLEGIDGAGKSSHLDAMEALFKAQGRTVVRTREPGGTPLAETLRGLIL---EQ 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E+++  AAR DH+  VI PAL  G ++LCDRF D+++AYQG         L +L
Sbjct: 58  PMDPLTESLLVFAARRDHIVQVIEPALARGDLVLCDRFTDATFAYQGAGRGFDAAVLSTL 117

Query: 121 QEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++ +        + P  T+  DL  +I  +R+        +   D FE + V    +  Q
Sbjct: 118 EQWAQGGRAEGLLQPHITLWFDLAPEIAAQRLAG------ARVPDKFEAQPVEFFRRVAQ 171

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + D A     R   +D++ +   V   I   +
Sbjct: 172 GYADRADADAQRFIRIDASQARDQVWQQIETAL 204


>gi|254292084|ref|ZP_04962859.1| thymidylate kinase [Vibrio cholerae AM-19226]
 gi|150421990|gb|EDN13962.1| thymidylate kinase [Vibrio cholerae AM-19226]
          Length = 212

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   LQ+   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 60  GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  D   ++D+A S + V  +I   + + + +
Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208


>gi|260584572|ref|ZP_05852318.1| dTMP kinase [Granulicatella elegans ATCC 700633]
 gi|260157595|gb|EEW92665.1| dTMP kinase [Granulicatella elegans ATCC 700633]
          Length = 211

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 10  EGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           EG +GAGKTT I  L   L+ + N  +  TREPGG+  AE  R ++L     E     EA
Sbjct: 2   EGPDGAGKTTVIEKLIPLLEERTNVTITSTREPGGSRIAEDIRQIILDVQNVEMDVRTEA 61

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           I++AAAR  H+ + I P L +G I+ CDRF+DSS  YQG         +  L + +    
Sbjct: 62  ILYAAARRQHLTDRILPNLEKGGIVFCDRFVDSSLVYQGVARGIGIEEVYQLNQFATAGK 121

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD T+ LD+P +IGL+R+   +  + +   D  +++ +  H+  RQ +LDI    P+R 
Sbjct: 122 TPDVTLYLDVPAEIGLERI---HLAKGNRQFDRLDQEGLQFHKMVRQGYLDIIPTDPERF 178

Query: 189 HIVDSAHSFQSVATNILNIVWE 210
             +D+  +   V    L  + +
Sbjct: 179 IQIDATKTVDEVVQECLTALVD 200


>gi|153802880|ref|ZP_01957466.1| thymidylate kinase [Vibrio cholerae MZO-3]
 gi|124121598|gb|EAY40341.1| thymidylate kinase [Vibrio cholerae MZO-3]
          Length = 212

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   LQ+   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 60  GEELKDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  D   ++D+A S + V  +I   + + + +
Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208


>gi|229528965|ref|ZP_04418355.1| thymidylate kinase [Vibrio cholerae 12129(1)]
 gi|229332739|gb|EEN98225.1| thymidylate kinase [Vibrio cholerae 12129(1)]
          Length = 212

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/216 (33%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   LQ+   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 60  GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTALGAFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  D   ++D+A S + V  +I   + + + +
Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208


>gi|254468768|ref|ZP_05082174.1| thymidylate kinase [beta proteobacterium KB13]
 gi|207087578|gb|EDZ64861.1| thymidylate kinase [beta proteobacterium KB13]
          Length = 201

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 10/208 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EGI+GAGK+TH+  ++ +L +KN    +TREPGGT   E  R +LL    D+    
Sbjct: 4   FITVEGIDGAGKSTHLEFIQSYLNKKNIQNKLTREPGGTEIGEKLRQLLLH---DDMDVG 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR +H+  VI+PAL     ++CDRF D+SYAYQ         F+ SL+E+  
Sbjct: 61  TETMMMFAARHEHLITVIQPALQSNISIICDRFTDASYAYQQGGKGIDKSFVKSLEELVH 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD T + DL  D    R+ N         LD FE++        R+++L++A+   
Sbjct: 121 PNLTPDLTFLFDLDPDTAHSRISN------ERNLDKFEKQSSTFFNGVRKVYLELAKAH- 173

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R H++DS+ +   +   I   + ELV+
Sbjct: 174 SRFHVIDSSQTIDQIQQVISKKLDELVK 201


>gi|121604849|ref|YP_982178.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2]
 gi|120593818|gb|ABM37257.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2]
          Length = 260

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 31/239 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFISFEGI+GAGK+THI+ L    Q +   V +TREPGGT  AE  R+++L    D 
Sbjct: 31  SQGLFISFEGIDGAGKSTHIAGLADAFQSEGRAVTLTREPGGTLLAEKLRNMVLD---DA 87

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E+++  AAR DH+  VI PAL+ G ++LCDRF D+++AYQG         L +L+
Sbjct: 88  MDPLTESLLIFAARRDHLVRVIAPALLRGDVVLCDRFTDATFAYQGAGRGFDVKVLATLE 147

Query: 122 EISVQE--------------------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
                                     + P  T+  DLP +    R+       +S   D 
Sbjct: 148 RWVQSGEGLLGDPAGNQPMKPEVETVIEPHLTVWFDLPPEEAALRLA------DSRVPDR 201

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE--LVQKRVSP 218
           FE + V    +  + + +     P+R   +D++ + ++V   I  +  E   +Q    P
Sbjct: 202 FESQPVEFFRRVARGYAERQLGHPERFARIDASQNREAVWQGIRQVFVEKGWLQAAALP 260


>gi|50954227|ref|YP_061515.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|59798229|sp|Q6AGT5|KTHY_LEIXX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|50950709|gb|AAT88410.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 210

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 7/204 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+ EG +G GK+T  +LL+R+L      V  TREPGGT      R ++L    D 
Sbjct: 7   RPGLFITLEGGDGVGKSTQAALLERWLLGLGRAVVRTREPGGTDLGAEIREIVLHRRGD- 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA+++AA R  HV  V+RPAL  G+++L DR+LDSS AYQG         +  L 
Sbjct: 66  IAPRAEALLYAADRAHHVATVVRPALERGEVVLQDRYLDSSVAYQGAGRVLDAGEVRELS 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + ++PD TI+LDL       R+ +  +       D  E +    H + R  +L +A
Sbjct: 126 LWAAEGLLPDLTILLDLDETTARARLGSART-----RYDRLEAERSEFHARVRAAYLALA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205
             +P R  +VD++   + +A  I 
Sbjct: 181 A-EPQRFLVVDASRPVEEIAAEIR 203


>gi|119469414|ref|ZP_01612353.1| thymidylate kinase [Alteromonadales bacterium TW-7]
 gi|119447278|gb|EAW28547.1| thymidylate kinase [Alteromonadales bacterium TW-7]
          Length = 208

 Score =  232 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI  EG+EGAGK+T ISL + FL +K  +    REPGGTP AE+ R ++ +   +E 
Sbjct: 2   KPKFIVVEGLEGAGKSTAISLCQDFLNKKQIEYINVREPGGTPLAESLRTLVKAEHKEEI 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E ++  AAR   + NVI PAL +GK +L DR   SS AYQG         L SL  
Sbjct: 62  AFETELLIMYAARSQLMHNVINPALEQGKWILADRHDLSSQAYQGGGRGISSNTLASLSS 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + ++ + PD TI LD+   IGL+R + R        LD  E++ +   ++ R  +L++A 
Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELAS 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  +    VD+      V  +I N++    ++
Sbjct: 176 DD-NSIKTVDANQEIDKVHRDITNVLRTFFEE 206


>gi|221068068|ref|ZP_03544173.1| dTMP kinase [Comamonas testosteroni KF-1]
 gi|220713091|gb|EED68459.1| dTMP kinase [Comamonas testosteroni KF-1]
          Length = 229

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 72/218 (33%), Positives = 108/218 (49%), Gaps = 21/218 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFISFEGI+GAGK++HI  L +  + +   V +TREPGGTP AE  R ++L    D  
Sbjct: 7   KGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLH---DAM 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++  AAR DH+  VI PAL  G++++ DRF D+++AYQG         L  L+ 
Sbjct: 64  DPLTEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSVLER 123

Query: 123 ISVQEV------------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++                 PD T+  DLP ++  +R+        +   D FE +     
Sbjct: 124 MAQTGTALQAESSPDFMREPDMTLWFDLPAEVAAERLTT------ARVPDRFEAQPGEFF 177

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  Q + + AR  P R   +D+  S  +V   I   +
Sbjct: 178 ARVAQGYAERARTAPQRFVRIDAHASRHAVWQQITQAL 215


>gi|315229969|ref|YP_004070405.1| thymidylate kinase [Thermococcus barophilus MP]
 gi|315182997|gb|ADT83182.1| thymidylate kinase [Thermococcus barophilus MP]
          Length = 209

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 19/219 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+FI  EGI+GAGK+T   LL ++ +++ Y+V +T+EP  T   +  R ++L+ G +   
Sbjct: 2   GIFIVIEGIDGAGKSTQAKLLAKWFEKRGYNVVLTKEPTDTAFGKLIRKLVLTGGREGII 61

Query: 61  ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              +   EAEA++FAA R +HV+ +I P+L  GK+++ DR+  SS AYQ  R     L L
Sbjct: 62  DGAKISHEAEALLFAADRAEHVKKLIEPSLRTGKVVISDRYFYSSLAYQWARG----LDL 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L  ++   + PD  I+LDLPV   +KR+  R    E    D        + +K R+ +
Sbjct: 118 EWLINLNKFAIRPDLVILLDLPVKESMKRINGRQLKSE---FDRI----AELQKKVRENY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQKR 215
           L +    P+   IV++  S + +  +I+ +V  E++ K+
Sbjct: 171 LKLVEMFPE-MKIVNALASIEDIHNDIVALVEHEILNKK 208


>gi|114327739|ref|YP_744896.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1]
 gi|114315913|gb|ABI61973.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1]
          Length = 250

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 79/221 (35%), Positives = 113/221 (51%), Gaps = 7/221 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG FI+ EG EGAGK+T    L   L+       VTREPGGT  AE  R +LL     +
Sbjct: 34  SSGRFITLEGGEGAGKSTQTRALAEALESLGIRTLVTREPGGTEGAEQLRSLLLYGP--D 91

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   AE ++  AAR  HV   IRPAL +G  +LCDR+ DS+ AYQG    +    + +L 
Sbjct: 92  WDGLAETLLHFAARAQHVARTIRPALEQGIWVLCDRYYDSTMAYQGYCQGADRQRIAALS 151

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + P+ T++LD PV+  ++R+  R      A  D +ER      E+ R  FLDIA
Sbjct: 152 AW--LGLDPEVTLVLDAPVEASVQRLATRSGTLTVA--DRYERLGKPFFEQVRAAFLDIA 207

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLSS 221
            + P RC ++D       V    L  + E +   R++P + 
Sbjct: 208 ASSPQRCVVLDGIRPPAEVTRMALAALAEKLGDPRLAPAAG 248


>gi|148825264|ref|YP_001290017.1| thymidylate kinase [Haemophilus influenzae PittEE]
 gi|229846542|ref|ZP_04466650.1| thymidylate kinase [Haemophilus influenzae 7P49H1]
 gi|254808295|sp|A5UA33|KTHY_HAEIE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148715424|gb|ABQ97634.1| thymidylate kinase [Haemophilus influenzae PittEE]
 gi|229810635|gb|EEP46353.1| thymidylate kinase [Haemophilus influenzae 7P49H1]
          Length = 210

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L +    DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  V+NVI+PALM+GK ++ DR   SS AYQG        F+ +L+
Sbjct: 62  VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E  + +  PD TI LD+   +GL R + R        LD  E+ D+    + R  +L++ 
Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ P +  ++++  S + V  +I   V   
Sbjct: 176 KDNP-KAVMINAEQSIELVQADIERAVKNW 204


>gi|254785815|ref|YP_003073244.1| dTMP kinase [Teredinibacter turnerae T7901]
 gi|259494282|sp|C5BU64|KTHY_TERTT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|237685419|gb|ACR12683.1| dTMP kinase [Teredinibacter turnerae T7901]
          Length = 205

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI+ EG EG GK+T+++ ++ FL+ +  DV  TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGRFITVEGTEGVGKSTNLAFIEGFLRSRAIDVITTREPGGTPLAEELRELLLAKREEPV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A AE ++  AAR  H+  ++ PAL  G+ +LCDRF D++YAYQG         +  L+ 
Sbjct: 62  DACAELLMVFAARAQHLNQLVAPALARGQWVLCDRFTDATYAYQGAGRGLSLETISKLEF 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    + PD T+ LD+ V +GL+R + R        LD FE +DV   E+ R  +   A 
Sbjct: 122 LVQGSLQPDITVWLDIDVRLGLERARARAD------LDRFEEEDVSFFERVRAGYRARAE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R   +++      V T+I   +   +
Sbjct: 176 EAPARFCRINAGQPLAQVQTDIQRALEAFL 205


>gi|86742981|ref|YP_483381.1| thymidylate kinase [Frankia sp. CcI3]
 gi|86569843|gb|ABD13652.1| thymidylate kinase [Frankia sp. CcI3]
          Length = 730

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 9/219 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EGI+GAGK+T + LL+ +L     +V VT E GGT      R +LL        
Sbjct: 505 GLFIAIEGIDGAGKSTQVELLRTWLASSGREVVVTSESGGTALGTGLRELLLDP-TVRLH 563

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++ AA R +HV  VI PAL  G I++ DR++DS  A+Q    +     L  L + 
Sbjct: 564 PRTEALLTAADRAEHVAQVIEPALARGAIVITDRYVDSFIAFQSVSQALSTDELSVLTQW 623

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ--------NRYSLRESACLDYFERKDVMIHEKRRQ 175
           +   ++PD T++LDLP +I L+R +                   +  +   +    + R 
Sbjct: 624 ATHALLPDVTVLLDLPAEIVLRRARMTAYPDPPPGPPGPPDGPAEADDAGKLTFQGRVRD 683

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            F  +A+ +PDR   +D+  S + +   I + +   + +
Sbjct: 684 TFRRLAQKEPDRYLPLDATRSPEEIHAEIRSFMASRIDR 722


>gi|238920255|ref|YP_002933770.1| thymidylate kinase [Edwardsiella ictaluri 93-146]
 gi|259494269|sp|C5B8G5|KTHY_EDWI9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238869824|gb|ACR69535.1| thymidylate kinase, putative [Edwardsiella ictaluri 93-146]
          Length = 213

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 9/215 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62
            FI  EG+EGAGKTT   ++   L+R    +V  TREPGGTP AE  R ++      +  
Sbjct: 4   KFIVIEGLEGAGKTTARDVVVDELRRHGIPEVVFTREPGGTPLAEHLRTLVKEGVDGETL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  TDRAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHLMQTLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+P   GL+R ++R        LD  ER+ +   E+ R  +L +A 
Sbjct: 124 TVLGDFKPDLTLYLDIPPQQGLERARSR------GELDRIERESLAFFERTRARYLALAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              +    +D+    + V+  I   +   +  + +
Sbjct: 178 VD-ETIVTLDAGQPLEQVSAAIRQALRAWLASQEA 211


>gi|85706301|ref|ZP_01037395.1| thymidylate kinase [Roseovarius sp. 217]
 gi|85669074|gb|EAQ23941.1| thymidylate kinase [Roseovarius sp. 217]
          Length = 208

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 113/210 (53%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLF+SFEGI+G+GK+T    L   L+    DV +TREPGG+P AE  R ++L    D +
Sbjct: 4   QGLFLSFEGIDGSGKSTQARRLAEALRGVGRDVVLTREPGGSPGAEEIRRLVLEGDKDRW 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E VI PAL  G +++CDRF DS+  YQG   S     +D L  
Sbjct: 64  SAETEILLFTAARRDHLERVIAPALDRGAVVICDRFADSTRMYQGLGRSDLRGLVDQLHG 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T+++D+   +GL R  +R           FE     +  + R  FL +A+
Sbjct: 124 LMI-GREPDLTVLIDIDPGVGLGRALSRGGAEA-----RFESFGEGMQARMRAGFLALAQ 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               R  ++D A    +VA ++  +V   +
Sbjct: 178 EFAPRFAVIDGAGDLDAVAEDVARVVQAHL 207


>gi|317492364|ref|ZP_07950793.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919703|gb|EFV41033.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 213

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 9/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62
            FI  EG+EGAGKTT    +   L+++   D+  TREPGGTP AE  R ++      ++ 
Sbjct: 4   KFIVIEGLEGAGKTTARDTVVDVLRQQGIQDIVFTREPGGTPLAEKLRDLVKQGVENEKL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  V+NVI+PAL  G  ++ DR   SS AYQG         + SL++
Sbjct: 64  TDKAEVLMLYAARVQLVDNVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDSRLMQSLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LDLP  IGL+R ++R        LD  E++ +   E+ R  +L++A 
Sbjct: 124 TVLGDFKPDLTLYLDLPPAIGLERARSR------GALDRIEKESLAFFERTRTRYLELAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   VD++ +   V   I   +    +++
Sbjct: 178 QDAS-IITVDASQTLPEVTAAIRLALESWFKQQ 209


>gi|313680451|ref|YP_004058190.1| thymidylate kinase [Oceanithermus profundus DSM 14977]
 gi|313153166|gb|ADR37017.1| thymidylate kinase [Oceanithermus profundus DSM 14977]
          Length = 209

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 10/204 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FISFEG EG+GK+T  + L   L+ +     +T EPGGT      R  LL  G      
Sbjct: 6   RFISFEGPEGSGKSTQAARLAARLRARGVSTVLTHEPGGTELGREVRRWLLHQGA-AMSP 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE ++++A R +HV  V+ PAL  G  ++CDRF+DSSYAYQG        +L S+ +  
Sbjct: 65  EAEFLLYSADRAEHVRTVLEPALAAGSFVICDRFVDSSYAYQGYGRGLDLAWLRSVSDGI 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++ V P  T +LDLP + GL R+  R         D  E + +  H + R+ +  +A+++
Sbjct: 125 LRGVRPSLTFLLDLPPERGLARLAGR---------DRLEGESLTFHRRVREGYRSLAQSE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           P+R  ++D+      +   I   V
Sbjct: 176 PERFVVLDAELPEDELEARIAREV 199


>gi|242241567|ref|ZP_04796012.1| dTMP kinase [Staphylococcus epidermidis W23144]
 gi|242234948|gb|EES37259.1| dTMP kinase [Staphylococcus epidermidis W23144]
          Length = 203

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ I  +   L ++ YD+  TREPGG   +E  R ++L    +     
Sbjct: 4   FITFEGPEGAGKTSVIKEVSERLAKE-YDIVTTREPGGVLTSEEIRRIVLDG--ESIDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   I P+L  GKI+LCDR++DSS AYQG         +  L E ++
Sbjct: 61  TEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  +IG +R+     L+ +   +  +++D + HEK  + +  +  + P
Sbjct: 121 NGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISDNP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R   V++ HS   V       + + ++
Sbjct: 176 HRFIKVNANHSLDKVVEETYQSIIKCLK 203


>gi|119384876|ref|YP_915932.1| dTMP kinase [Paracoccus denitrificans PD1222]
 gi|119374643|gb|ABL70236.1| thymidylate kinase [Paracoccus denitrificans PD1222]
          Length = 199

 Score =  231 bits (591), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 6/195 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEGI+G+GK+T    L + L  +  +V +TREPGG+  AE  R +L+    + +  
Sbjct: 1   MFISFEGIDGSGKSTQARRLVQALTAQGTEVLLTREPGGSEGAEEIRRLLVEGCGERWSP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++F AAR DHVE +I+PAL  G  ++ DRF DSS  YQG   +     ++ L  ++
Sbjct: 61  ETELLLFTAARRDHVERLIQPALARGAWVVTDRFADSSRVYQGLARAELRQLVEELHRLT 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + PD T I+D+   + L R Q R  +      D FE   +    K R+ FL +A   
Sbjct: 121 I-GIEPDRTFIIDIDPAVALARGQARGGVE-----DRFETLGLGFQRKLREGFLALAAEA 174

Query: 185 PDRCHIVDSAHSFQS 199
           P R  ++D   S   
Sbjct: 175 PGRIRVIDGNGSEDE 189


>gi|157412486|ref|YP_001483352.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
 gi|166987706|sp|A8G2D5|KTHY_PROM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157387061|gb|ABV49766.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9215]
          Length = 212

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSC 57
            G FI  EGI+G GKTT I  L ++L      +K   +  TREPGG+   +  R ++L  
Sbjct: 2   KGKFIVIEGIDGCGKTTQIDELSKWLPSSGLIKKGSKLITTREPGGSHLGKRLRGLILDN 61

Query: 58  G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++    AE ++++A R +HV  +I PAL     ++ DRF DS+ AYQG   +     
Sbjct: 62  NQNNKPSPLAELLLYSADRAEHVYKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + +++ I  Q   PD T  L++  +  + R       R++   D  E + +   EK  + 
Sbjct: 122 IKNIESIVCQGESPDLTFFLEISPEESIFR-------RKNQIPDRIESEGIEFLEKVNKG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           F  IA+       ++ ++ + ++++  I   V
Sbjct: 175 FKIIAKE--KNWTVISASQNIKTISNQIKETV 204


>gi|89053768|ref|YP_509219.1| thymidylate kinase [Jannaschia sp. CCS1]
 gi|122499181|sp|Q28SW8|KTHY_JANSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|88863317|gb|ABD54194.1| thymidylate kinase [Jannaschia sp. CCS1]
          Length = 208

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 6/210 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFIS EGI+G+GK+T  + L  +L+ +  D   TREPGG+  AE  R +L+    D + A
Sbjct: 4   LFISLEGIDGSGKSTQTARLVDWLRVRGRDPLQTREPGGSEGAEEIRRLLVEGDPDRWSA 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E ++F AAR DH+E  IRPAL  G+ ++ DRF DS+  YQG    +    +D +   +
Sbjct: 64  ETEILLFTAARRDHLERTIRPALASGRDVVTDRFADSTRVYQGATRGALRGLVDRIHAEA 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   PD T+ILD+  ++ L R   R S       D FE   +   +K R  F  +AR  
Sbjct: 124 IEA-EPDLTLILDMDPELALSRGLARDS-----GEDRFEDFGLPFQQKLRAGFQALAREY 177

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           PDRCHIVD++    ++A  I  IV + + +
Sbjct: 178 PDRCHIVDASADPDAIAHTIQTIVGQRLAE 207


>gi|262170995|ref|ZP_06038673.1| thymidylate kinase [Vibrio mimicus MB-451]
 gi|261892071|gb|EEY38057.1| thymidylate kinase [Vibrio mimicus MB-451]
          Length = 212

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58
           MN+  FI  EG+EGAGK+T I ++   L +   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  +   ++D+A S + V+ +I   +   + +
Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTALEHWLSR 208


>gi|299529315|ref|ZP_07042754.1| thymidylate kinase [Comamonas testosteroni S44]
 gi|298722693|gb|EFI63611.1| thymidylate kinase [Comamonas testosteroni S44]
          Length = 229

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 21/218 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFISFEGI+GAGK++HI  L +  + +   V +TREPGGT  AE  R ++L    D  
Sbjct: 7   KGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTSLAEKLRALMLH---DAM 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++  AAR DH+  VI PAL  G++++ DRF D+++AYQG         L +L+ 
Sbjct: 64  DPLTEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSALER 123

Query: 123 ISVQEV------------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++                 PD T+  DLP ++  +R+        +   D FE +     
Sbjct: 124 MAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAERLAT------ARVPDRFEAQPGEFF 177

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  + + + AR  P R   +D+  S  +V   I   V
Sbjct: 178 ARVAKGYAERARTAPGRFVRIDAHASRHAVWQQITQAV 215


>gi|242239032|ref|YP_002987213.1| thymidylate kinase [Dickeya dadantii Ech703]
 gi|242131089|gb|ACS85391.1| thymidylate kinase [Dickeya dadantii Ech703]
          Length = 217

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 73/214 (34%), Positives = 112/214 (52%), Gaps = 10/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKT+  +++   L      DV  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTSARTVVVDGLAAFGIRDVVFTREPGGTPVAEKLRELIKQGVD 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 60  GEPLTDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDARLLS 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++I + +  PD T+ LDLP  +GL+R + R        LD  E++ +   E+ R  + 
Sbjct: 120 SLRDIVLGDFRPDLTLYLDLPPALGLQRARQR------GELDRIEQESLTFFERTRARYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +A +  +    +D++ +   V+ +I   +   +
Sbjct: 174 QLAASD-NSIVTIDASRAIDQVSMSIHQALGNWL 206


>gi|260773142|ref|ZP_05882058.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14]
 gi|260612281|gb|EEX37484.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14]
          Length = 211

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58
           MN+  FI  EG+EGAGK+T I ++   LQ    +    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVVEGLEGAGKSTAIQVVIDTLQAFGIESITQTREPGGTVLAEKMRALVKEDHP 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDVTEVLLMYAARVQLVENVIKPALAAGCWVVGDRHDMSSQAYQGGGRQISPATMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+++++    PD T+ LD+   +GL+R + R        LD  ER D+   E+ RQ +L
Sbjct: 120 QLKQLALGAFSPDFTLYLDIDPRVGLERARGR------GELDRIERMDLSFFERTRQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A++ P    I+++  + Q+V  +I   +   + + 
Sbjct: 174 ELAKDNPS-VTIINAQQTLQAVTQDIQQALLNWLNQH 209


>gi|269836979|ref|YP_003319207.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745]
 gi|269786242|gb|ACZ38385.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745]
          Length = 212

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 82/229 (35%), Positives = 116/229 (50%), Gaps = 29/229 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG EGAGK+T I  L   L+ + Y V  TREPGGT   EA R +LL+        
Sbjct: 3   LFVTFEGPEGAGKSTQIRRLASELEARGYSVVATREPGGTAIGEAIRQILLAPEHSAMLP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E EA++  AAR  HV  VI+PAL  GKI+LCDRF+DS+  YQG         L +LQ  +
Sbjct: 63  ETEALLNTAARAQHVAEVIQPALAAGKIVLCDRFVDSTLVYQGAGRGLPTSDLLALQRFA 122

Query: 125 VQE----------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            +           +           V++G  R +          L  F+   +  HE+ R
Sbjct: 123 TRGLWPDLTLLLDLP----------VEVGQARRRA-----SGEPLSRFDADALGFHERVR 167

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
             FL +AR+ P R  I+D+A S ++VA  +L +V E    R+ P   ++
Sbjct: 168 TGFLALARDDPARWRIIDAAQSEEAVAREVLAVVLE----RLPPAPGRQ 212


>gi|327393492|dbj|BAK10914.1| thymidylate kinase Tmk [Pantoea ananatis AJ13355]
          Length = 211

 Score =  231 bits (590), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 9/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEF 62
            FI  EG+EGAGKTT    +   L+    D +  TREPGGTP AE  R ++      ++ 
Sbjct: 4   KFIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLRVLVKQGIEGEQV 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  TDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+  + GL+R + R        LD  E++ +   E+ R+ +L +A 
Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              D    +D+    + V + +   +   + ++
Sbjct: 178 AD-DSILTIDATQPLEQVTSALHATLTAWLAEQ 209


>gi|149191871|ref|ZP_01870106.1| thymidylate kinase [Vibrio shilonii AK1]
 gi|148834306|gb|EDL51308.1| thymidylate kinase [Vibrio shilonii AK1]
          Length = 212

 Score =  231 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FI  EG+EGAGK+T IS L+  L      D+  TREPGGT  AE  R ++     
Sbjct: 1   MSQAKFIVIEGLEGAGKSTAISTLRAELDAAGIQDIVNTREPGGTVLAEKMRALVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  A+R+  VE VI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 61  GEPLQDRAELLLMYASRIQLVETVIKPALAKGAWVIGDRHDMSSQAYQGGGREIDQAVMT 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL+ I++ E  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 121 SLKHIAIGEFKPDFTLYLDIDPRLGLERARGR------GELDRIEKMDISFFERTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A N  +   I+D++   + V  +I   V   + K+
Sbjct: 175 EMANND-ESVAIIDASQKIEDVQHSIQQAVRTWLAKQ 210


>gi|256545293|ref|ZP_05472657.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170]
 gi|256398974|gb|EEU12587.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170]
          Length = 209

 Score =  231 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GL I FEG +G+GKTT +  +   L    YD++  REPGGT  +E  R ++L     
Sbjct: 1   MN-GLLIVFEGPDGSGKTTVLEKVYNKLLEDGYDIYKFREPGGTDISEKIREIILDNENI 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E     EA+++AA+R   V   +RP L +G I+LCDRF+ SS  YQG         + ++
Sbjct: 60  EMNPRCEALLYAASRAQLVGEKLRPLLEKGSIILCDRFVLSSMLYQGIGRGLGVDEVKNI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++ E+  D T+ L++     + R +  +        D  E +D   H+K    ++++
Sbjct: 120 NDFAIGEIRADLTLFLNIDYKTAIDRKRKNFIS------DRLENEDDSFHKKTYDGYIEL 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++   D    +D+  S  +V  N L  +   ++++
Sbjct: 174 SKRFKDEIISIDANKSIDTVVDNCLATIKTYLKEK 208


>gi|197334909|ref|YP_002156557.1| thymidylate kinase [Vibrio fischeri MJ11]
 gi|238690296|sp|B5FG34|KTHY_VIBFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|197316399|gb|ACH65846.1| thymidylate kinase [Vibrio fischeri MJ11]
          Length = 210

 Score =  231 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 9/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE-F 62
            FI  EG+EGAGK+T I  +   L +        TREPGGTP AE  R ++     DE  
Sbjct: 3   KFIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR   V NVI+PAL +G+ ++ DR   SS AYQG         + +++ 
Sbjct: 63  TDMAELLLLYAARAQLVGNVIKPALAKGEWVVGDRHDLSSQAYQGGGRGFDRDLMMTMRN 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI +D+   +GL+R   R        LD  E+  +   E+ R+ +L+ A 
Sbjct: 123 TVLGDFKPDLTIYMDIDPKLGLQRASAR------GELDRIEQMKLDFFERSRERYLEFAN 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  +    +D+    ++V  +I+  +   +
Sbjct: 177 SD-ESIITIDAGQDLETVTQSIITALEAWL 205


>gi|254172680|ref|ZP_04879355.1| thymidylate kinase [Thermococcus sp. AM4]
 gi|214033609|gb|EEB74436.1| thymidylate kinase [Thermococcus sp. AM4]
          Length = 227

 Score =  231 bits (590), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 121/215 (56%), Gaps = 18/215 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+F+  EGI+GAGK+T   LL ++ +RK Y+V +T+EP  T   +  R ++L+ G +   
Sbjct: 21  GIFVVIEGIDGAGKSTQAKLLAKWFERKGYEVVLTKEPTDTAFGKLIRKLVLTGGREGII 80

Query: 61  ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  EAEA++FAA R +HV  +IRPAL  GK+++ DR+  SS AYQ  R     L L
Sbjct: 81  DGARISHEAEALLFAADRAEHVHKLIRPALESGKVVISDRYFYSSLAYQWARG----LDL 136

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L +++   V PD  ++LDLPV   ++R+  R    E   +       + + +K R+ +
Sbjct: 137 QWLIDLNRFAVRPDLVVLLDLPVKESMRRINGRSIKTEFDKI-------LELQKKVRENY 189

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L +A   P+   IV++ +S + +  +I+ +V + +
Sbjct: 190 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLVEQEI 223


>gi|258621219|ref|ZP_05716253.1| thymidylate kinase [Vibrio mimicus VM573]
 gi|258586607|gb|EEW11322.1| thymidylate kinase [Vibrio mimicus VM573]
          Length = 212

 Score =  231 bits (589), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   L +   +    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGINQITRTREPGGTVLAEKLRALVKEEHP 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E      E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  +   ++D+A S + V+ +I  ++   + +
Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTVLEHWLSR 208


>gi|325283899|ref|YP_004256440.1| Thymidylate kinase [Deinococcus proteolyticus MRP]
 gi|324315708|gb|ADY26823.1| Thymidylate kinase [Deinococcus proteolyticus MRP]
          Length = 211

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 1   MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M++G   FI+FEG EGAGK+T ++ L   L+       +T+EPGGT A +  R  LL   
Sbjct: 1   MSAGTLPFITFEGGEGAGKSTQLARLAARLEAAGVPHLLTKEPGGTAAGDQIRATLLDPA 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +D     AE ++++A+R   V  V++PAL  G++++CDR+ DS+ AYQG        FL 
Sbjct: 61  LD-IDPLAEFLLYSASRAQLVREVLQPALERGELVVCDRYADSTLAYQGYGRGLPLPFLQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++   +   + P  T++LDL   +GL RV  R         D  ER D+  H + R  FL
Sbjct: 120 AVTAEATGGLTPALTVLLDLDPAVGLARVAQR------GQADRLERADLDFHRRLRAGFL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +A  QP R  ++D+  S   +   I   V 
Sbjct: 174 ALAEQQPQRWLVLDAGRSADELEEAIWARVQ 204


>gi|123967684|ref|YP_001008542.1| thymidylate kinase [Prochlorococcus marinus str. AS9601]
 gi|166223102|sp|A2BNS4|KTHY_PROMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123197794|gb|ABM69435.1| Thymidylate kinase [Prochlorococcus marinus str. AS9601]
          Length = 212

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSC 57
            G FI  EGI+G GKTT I  L ++L      +K   +  TREPGG+   +  R ++L  
Sbjct: 2   KGKFIVIEGIDGCGKTTQIDELSKWLPNSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61

Query: 58  G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++  + AE ++++A R +HV  +I PAL     ++ DRF DS+ AYQG   +     
Sbjct: 62  NKNNKPSSLAELLLYSADRAEHVSKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + +++ I  Q   PD T  L++  +  + R       R++   D  E + +   EK  + 
Sbjct: 122 IKNIESIVCQGASPDLTFFLEISPEESIFR-------RKNEIPDRIESEGIRFLEKVNEG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           F  IA+       ++ ++ + Q+++  I   +
Sbjct: 175 FKLIAKQ--KNWKVISASQNIQTISNQIKETL 204


>gi|307131529|ref|YP_003883545.1| thymidylate kinase [Dickeya dadantii 3937]
 gi|306529058|gb|ADM98988.1| thymidylate kinase [Dickeya dadantii 3937]
          Length = 217

 Score =  231 bits (589), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 113/216 (52%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKT+  +++   L+    D +  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTSAHAVVVETLRTFGIDDIVFTREPGGTPLAEKLRELIKQGVA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VENVIRPAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  DEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDEQLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LD+P ++GLKR + R        LD  E + +   E+ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDIPPELGLKRARQR------GALDRIELESLAFFERTRARYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +A         +D++     V  +I  ++ + +++
Sbjct: 174 QLAAADAS-IMTIDASRELAQVNADIRQVLSDWLRQ 208


>gi|323499364|ref|ZP_08104340.1| thymidylate kinase [Vibrio sinaloensis DSM 21326]
 gi|323315549|gb|EGA68584.1| thymidylate kinase [Vibrio sinaloensis DSM 21326]
          Length = 210

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FI  EG+EGAGK+T I  +   L     + +  TREPGGT  AE  R ++     
Sbjct: 1   MSQAKFIVIEGLEGAGKSTAIKAVLDTLNLAGVESIKNTREPGGTVLAETLRTLVKQEHE 60

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E      E ++  AAR+  VENVI+PAL +G+ ++ DR   SS AYQG         + 
Sbjct: 61  GEVLQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIAKETMS 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 ALKQTTLGSFKPDLTLYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A    D   I+++    + VA +I   +   ++K+
Sbjct: 175 ELANGD-DSVLIINAEQPIEKVAADIKTTLTHWLEKQ 210


>gi|317120927|ref|YP_004100930.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885]
 gi|315590907|gb|ADU50203.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885]
          Length = 238

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 9/210 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FIS EG EG+GK+T  +++  +L+ +     + REPGGTP  E  R +LL+     
Sbjct: 25  RRGWFISLEGGEGSGKSTQAAVVMDWLRSRGMPCRLVREPGGTPLGERLRELLLNGTGRP 84

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++FAAAR   VE VI P+L+ G+ ++CDR++DSS AYQG         + S  
Sbjct: 85  V-PVAEMLLFAAARAQLVETVILPSLLAGETVVCDRYVDSSLAYQGSGLGLGWEAVWSAN 143

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + + +MPD T++ D P +  L R ++R         D  ER+    H + R+ +  +A
Sbjct: 144 RWATRGIMPDLTLLFDCPPE--LARARHR------RPGDDIERRGQGFHRRVREGYRALA 195

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           R   +R  ++D++     VA  +  ++   
Sbjct: 196 RAHGNRVVVIDASRPALEVAAEVRRVLERW 225


>gi|146295779|ref|YP_001179550.1| dTMP kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|259494264|sp|A4XHH4|KTHY_CALS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|145409355|gb|ABP66359.1| thymidylate kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 206

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 8/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG +G+GK+T I  ++++L+ K Y V  TREPGGT      R +LL     + 
Sbjct: 2   KGKFIVFEGNDGSGKSTQILKVEKYLKEKGYKVVTTREPGGTEVGFRIRKLLLDPAY-KM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++ AA R +HV+NV+ PAL +G +++CDR++ SS  YQG         +  L  
Sbjct: 61  DGLTEALLLAADRNEHVKNVLIPALEDGYVVVCDRYILSSIVYQGIVRGVGVENIIKLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I  +++ PD  IIL L  +I L+R++       +   D  + ++   H K    F ++++
Sbjct: 121 IFEEKIKPDLYIILTLSPEIALQRLK------MAGKNDKLDTENFDFHRKVYNGFKEVSK 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               +C  +++  + + V   +  ++ +L++KR
Sbjct: 175 MFK-KCVNIEAEGTVEDVFEKVRKVIDDLLKKR 206


>gi|262166120|ref|ZP_06033857.1| thymidylate kinase [Vibrio mimicus VM223]
 gi|262025836|gb|EEY44504.1| thymidylate kinase [Vibrio mimicus VM223]
          Length = 212

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58
           MN+  FI  EG+EGAGK+T I ++   L +   +    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTALAEKLRALVKEDHP 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIASSTMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ DV   E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDVSFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  +   ++D+A S + V+ +I   +   + +
Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTALEHWLSR 208


>gi|212223342|ref|YP_002306578.1| thymidylate kinase [Thermococcus onnurineus NA1]
 gi|229621846|sp|B6YSZ4|KTHY_THEON RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|212008299|gb|ACJ15681.1| thymidylate kinase [Thermococcus onnurineus NA1]
          Length = 205

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 18/217 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
           +FI  EGI+GAGK+T   LL  + ++K YDV +T+EP  T   +  R ++L+ G +    
Sbjct: 1   MFIVIEGIDGAGKSTQARLLAEWFKKKGYDVVLTKEPTDTAFGKLIRRLVLTGGKEGIID 60

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 EAEA++FAA R +HV  +I+P+L  GKI++ DR+  SS AYQ  R     L L+
Sbjct: 61  GARISHEAEALLFAADRAEHVHKLIKPSLKTGKIVISDRYFYSSLAYQWARG----LDLE 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L +++   V PD  I+LDLPV   +KR+  R    E   +         + +K R+ +L
Sbjct: 117 WLIDLNRFAVRPDLVILLDLPVKESMKRINGRSIKTEFDKI-------AELQKKVRENYL 169

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A   P+   IV++  S + +  +I+ +V   + KR
Sbjct: 170 KLAERFPE-MRIVNALASVEDIHNDIVALVEHELLKR 205


>gi|28898823|ref|NP_798428.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260879164|ref|ZP_05891519.1| dTMP kinase [Vibrio parahaemolyticus AN-5034]
 gi|31340183|sp|Q87N26|KTHY_VIBPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28807042|dbj|BAC60312.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308093561|gb|EFO43256.1| dTMP kinase [Vibrio parahaemolyticus AN-5034]
          Length = 210

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 116/217 (53%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGK+T I  +   L++   + +  TREPGGTP AE  R ++     
Sbjct: 1   MMKANFIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 61  GEELKDMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMK 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 121 NLRDTTLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +IA   P    ++++  S + V+ +I + + E + ++
Sbjct: 175 EIANADPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 210


>gi|149926477|ref|ZP_01914738.1| Thymidylate kinase [Limnobacter sp. MED105]
 gi|149824840|gb|EDM84054.1| Thymidylate kinase [Limnobacter sp. MED105]
          Length = 229

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 8/216 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  ISFEG++GAGK++HI+ +K  L+   ++   TREPGGTP  EA R ++L     +
Sbjct: 18  KQGYLISFEGVDGAGKSSHIARVKARLEELGFECLQTREPGGTPVGEAIRELVLH---HD 74

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E ++  AAR  H+   I+PAL  G  ++ DRF DSS+AYQ     +       L 
Sbjct: 75  MDVNTELLLMYAARRQHMVETIQPALDRGVWVITDRFEDSSFAYQAGAGGASWEDCQQLS 134

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +++   P  T + DLP+ I   R+Q R     +   D FE K     E  R  F+  +
Sbjct: 135 KWALKGFEPTLTFLFDLPIAISQSRIQGR-----AGASDKFEEKPTGYFEAVRAGFIKRS 189

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +  P R  ++D+  S   V   +L  + + ++  ++
Sbjct: 190 QLNPRRIRLIDAQPSESEVGETVLAELDKFMRTHLN 225


>gi|227499766|ref|ZP_03929866.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098]
 gi|227218152|gb|EEI83418.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098]
          Length = 209

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 6/212 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG +G+GKTT +S +K+ L++   +    REPGGT  +E  R +++        
Sbjct: 3   GKLIVFEGPDGSGKTTVLSEVKKRLEKDKIEFLDYREPGGTYISEKIRDIIIDKDNIAMT 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  E ++FAA+R   VE  I+PAL  G ++LCDRF+ SS  YQG         +  + + 
Sbjct: 63  ASCECLLFAASRAQLVEEKIKPALESGMLVLCDRFVLSSLLYQGVGRGLGIDKVKEINDF 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   +  D TI  D+     L R       RE+   D  E +D   H+K    +LDIA  
Sbjct: 123 ATAGLRADLTIFFDIDYKTALIRK------RENFSADRLESEDFDFHKKIFNAYLDIAER 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                  +D++ S   V   ++ +++E ++++
Sbjct: 177 YKKEIKKIDASKSVTEVTDQVMKLIYESLEEK 208


>gi|171058561|ref|YP_001790910.1| dTMP kinase [Leptothrix cholodnii SP-6]
 gi|170776006|gb|ACB34145.1| dTMP kinase [Leptothrix cholodnii SP-6]
          Length = 226

 Score =  231 bits (589), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F++ EGI+GAGKT+H+  +    + +  +V  TREPGGTP AEA R ++L       
Sbjct: 25  AGCFVTIEGIDGAGKTSHVQAIAERWRARGLEVVRTREPGGTPLAEALRELVLHQ---PM 81

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA++  AAR +H++ VI PAL  G ++LCDRF D+++AYQG         L  L+ 
Sbjct: 82  DALTEALLVFAARRNHLQEVIEPALARGAVVLCDRFTDATFAYQGGGRGFDTAVLAQLET 141

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD T+  DL  ++             +   D FER+ V      R  + D   
Sbjct: 142 WVQGSRQPDLTLWFDLGPEL------AAERRAAARAPDRFEREQVAFFHAVRLAYADRLA 195

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
             P R   +D+  + + VA   L ++ 
Sbjct: 196 QAPQRVQRIDAGGTPEQVAARWLAVLE 222


>gi|27366274|ref|NP_761802.1| thymidylate kinase [Vibrio vulnificus CMCP6]
 gi|37679464|ref|NP_934073.1| thymidylate kinase [Vibrio vulnificus YJ016]
 gi|320156783|ref|YP_004189162.1| thymidylate kinase [Vibrio vulnificus MO6-24/O]
 gi|31340187|sp|Q8D8H5|KTHY_VIBVU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576399|sp|Q7MLZ6|KTHY_VIBVY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|27362475|gb|AAO11329.1| thymidylate kinase [Vibrio vulnificus CMCP6]
 gi|37198208|dbj|BAC94044.1| thymidylate kinase [Vibrio vulnificus YJ016]
 gi|319932095|gb|ADV86959.1| thymidylate kinase [Vibrio vulnificus MO6-24/O]
          Length = 212

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 115/216 (53%), Gaps = 9/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGK+T I  +   L++    ++  TREPGGTP AE  R ++     
Sbjct: 1   MKQAKFIVIEGLEGAGKSTAIQTVLDTLRQAGINEIAQTREPGGTPLAEKMRALVKEEHP 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      E ++  AAR+  VENVI+PAL EGK ++ DR   SS AYQG         + 
Sbjct: 61  GEHLHDMTELLLLYAARVQLVENVIKPALHEGKWVVGDRHDLSSQAYQGGGRQIDATLMK 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ E  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 121 NLRDTALGEFKPAFTLYMDIDPKVGLERARGR------GELDRIEKMDISFFERTRQRYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A++       +++  S + VA +I + +   +++
Sbjct: 175 ELAKSDAS-IVTINAEQSIEQVANDIRSALNLWLEQ 209


>gi|114799318|ref|YP_760517.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444]
 gi|114739492|gb|ABI77617.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444]
          Length = 219

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 84/212 (39%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61
           +G FI+ EG EG GK+T    L R L+     V VTREPGGTP AEAAR +LL     + 
Sbjct: 6   AGHFITLEGGEGTGKSTLAKALARKLEAHGIGVVVTREPGGTPLAEAARQLLLHPPEGEA 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   +EA++  AAR DH+E +IRPAL  G  ++CDRF DS+  YQ          L S++
Sbjct: 66  WSPLSEALLVNAARRDHLEKLIRPALARGDWVICDRFADSTRVYQSIEGGVDVSALLSIE 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + + +P  T+ILD+ +D+  KR   R     +  LD FER+    HE  R  F DIA
Sbjct: 126 REVLGDTVPSMTLILDVSLDVASKRRTAR-----AGALDTFERRPKAFHEAVRAAFQDIA 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           R++P RC ++D+  +   V       V  L+Q
Sbjct: 181 RSEPARCRLIDTDVTPDQVLDAAWKQVATLLQ 212


>gi|312172085|emb|CBX80342.1| Thymidylate kinase [Erwinia amylovora ATCC BAA-2158]
          Length = 210

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCG- 58
           MN G FI  EG+EGAGKTT    +   LQR    D+  TREPGGTP AE  R ++     
Sbjct: 1   MN-GKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMV 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +     AE ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GERVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMS 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++  + +  P  T+ LD+  ++GL+R + R        LD  E++ +    + R  +L
Sbjct: 120 CLKQAVLGDFAPHLTLYLDVTPELGLQRARAR------GELDRIEQESLNFFTRTRDRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A         VD+      V   +   + + +Q++
Sbjct: 174 ALASADSL-IKTVDATQPLAQVTAALQQTLNQWLQEQ 209


>gi|59712342|ref|YP_205118.1| thymidylate kinase [Vibrio fischeri ES114]
 gi|73920832|sp|Q5E416|KTHY_VIBF1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|59480443|gb|AAW86230.1| thymidylate kinase [Vibrio fischeri ES114]
          Length = 210

 Score =  230 bits (588), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 9/212 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE-F 62
            FI  EG+EGAGK+T I  +   L +        TREPGGTP AE  R ++     DE  
Sbjct: 3   KFIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR   V NVI+PAL  G+ ++ DR   SS AYQG         + +++ 
Sbjct: 63  TDMAELLLLYAARAQLVGNVIKPALARGEWVVGDRHDLSSQAYQGGGRGFDRELMMTMRN 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI +D+   +GL+R   R        LD  E+  +   E+ R+ +L+ A 
Sbjct: 123 TVLGDFKPDLTIYMDIDPKLGLQRASAR------GELDRIEQMKLDFFERSRERYLEFAN 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  +    +D+    ++V  +I+  +   + K
Sbjct: 177 SD-ESIITIDAGQDLETVTNSIITALEAWLVK 207


>gi|120612065|ref|YP_971743.1| thymidylate kinase [Acidovorax citrulli AAC00-1]
 gi|166221717|sp|A1TSN1|KTHY_ACIAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|120590529|gb|ABM33969.1| thymidylate kinase [Acidovorax citrulli AAC00-1]
          Length = 221

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 17/217 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEGI+GAGK++HI  +   L+R+   V VTREPGGTP AE  R +LL+   + 
Sbjct: 3   RRGWFITFEGIDGAGKSSHIEAVAEALRREGRTVTVTREPGGTPLAETLRSLLLN---EA 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  E++V  A R DH+ +VI PAL+ G+++LCDRF D+++AYQG         L  L+
Sbjct: 60  MDALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLE 119

Query: 122 EISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            I+   +         P  T+  DL  D+   R++       +   D FE + V    + 
Sbjct: 120 RITQSGLQEGTDAVLHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRV 173

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            Q + D A   P R   +D+    ++V   ++ I+  
Sbjct: 174 AQGYADRAAADPGRFARLDADQPREAVRAQLMEILHR 210


>gi|322833645|ref|YP_004213672.1| thymidylate kinase [Rahnella sp. Y9602]
 gi|321168846|gb|ADW74545.1| thymidylate kinase [Rahnella sp. Y9602]
          Length = 216

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 10/218 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M S  FI  EG+EGAGKTT   ++   L++    ++  TREPGGTP AE  R +      
Sbjct: 1   MKSN-FIVIEGLEGAGKTTAHDVVVNALRQHGVGEIVFTREPGGTPLAEKLRDLFKRGVD 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VE VI PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEKPTVKAEVLMLYAARVQLVETVILPALARGAWVVGDRHDLSSQAYQGGGRGIDAKLMT 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  IGL+R + R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQEALPFFERTRTRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           ++A     R   +D++ S + V  +I   +     ++V
Sbjct: 174 ELAAGD-SRIKTIDASQSIEQVTASIELTLKNWFDEQV 210


>gi|23465074|ref|NP_695677.1| thymidylate kinase [Bifidobacterium longum NCC2705]
 gi|23325685|gb|AAN24313.1| thymidylate kinase [Bifidobacterium longum NCC2705]
          Length = 193

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 11/199 (5%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVDEFGAEAEAIVFA 72
           GKTT +  L+ +L+ +   V VTREPGGT   +A R +LL     G  +    AEA++FA
Sbjct: 2   GKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGAVDIAPRAEALLFA 61

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           A R  HV   IRPAL  G++++ DR+LDSS AYQ          + SL   +   ++PD 
Sbjct: 62  ADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRSLSMWATNNLLPDR 121

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
           T +LD+   +   R+++          D  E        + RQ FLD+A  +P+R  ++D
Sbjct: 122 TYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLDLAAAEPNRFRVID 173

Query: 193 SAHSFQSVATNILNIVWEL 211
           ++ S ++V   I + + EL
Sbjct: 174 ASQSIEAVWAAIESDIKEL 192


>gi|119775178|ref|YP_927918.1| thymidylate kinase [Shewanella amazonensis SB2B]
 gi|166223115|sp|A1S792|KTHY_SHEAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|119767678|gb|ABM00249.1| thymidylate kinase [Shewanella amazonensis SB2B]
          Length = 208

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 110/213 (51%), Gaps = 10/213 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           N G FI  EG+EGAGK++ I+L+  F+++        TREPGGTP AE  R ++ +    
Sbjct: 4   NPGKFIVIEGLEGAGKSSAITLVHDFIEKHTGMAPVCTREPGGTPLAEKIRDLVKNAEPG 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++F AAR   V NVI+P+L  G+ +L DR   SS AYQG         + +
Sbjct: 64  DPLCDEAECLLFYAARAQLVANVIKPSLASGRWVLGDRHNLSSIAYQGGGRGL-MSLVKT 122

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++    PD T+ LD+   +GL+R   R        LD  E++++    + R  FL 
Sbjct: 123 ISDATLGGFKPDLTLYLDIDPLLGLERAARR------GALDRIEQQEIDFFHRARATFLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            AR+      ++D++     V  +IL  +   +
Sbjct: 177 QARDDSS-IVVIDASKPLNEVHKDILACLSTAL 208


>gi|261209807|ref|ZP_05924109.1| thymidylate kinase [Vibrio sp. RC341]
 gi|260841105|gb|EEX67625.1| thymidylate kinase [Vibrio sp. RC341]
          Length = 212

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/214 (34%), Positives = 116/214 (54%), Gaps = 10/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58
           MN+  FI  EG+EGAGK+T I ++   L +   +    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTVLAEKLRTLVKEDHP 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL +G+ ++ DR   SS AYQG         + 
Sbjct: 60  GEELKDITELLLVYAARVQLVENVIKPALAKGQWVVGDRHDMSSQAYQGGGRQIAPSTML 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 120 SLKQTALGNFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++A    D   ++++A S + VAT+I + +   +
Sbjct: 174 ELAEED-DSVVLINAAQSVEQVATDIRHALTTWL 206


>gi|90413263|ref|ZP_01221257.1| putative thymidylate kinase [Photobacterium profundum 3TCK]
 gi|90325664|gb|EAS42127.1| putative thymidylate kinase [Photobacterium profundum 3TCK]
          Length = 209

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 9/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE-F 62
            FI  EG+EGAGK+T I  +   L     +    TREPGGTP AE  R ++     DE  
Sbjct: 4   KFIVIEGLEGAGKSTAIQQVIDTLAAHGIENPESTREPGGTPLAEQMRALIKDGHPDEPL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR+  V+N+I+PAL EG+ ++ DR   SS AYQG         +++L++
Sbjct: 64  TDMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI +D+   +GL+R + R        LD  E+ +V    + R  FL+++ 
Sbjct: 124 TVLGDFCPDLTIYMDIDPILGLERARGR------GELDRIEKMNVDFFHRARARFLELSE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           N P +  I+D++ S + V +++   +   ++K+
Sbjct: 178 NNP-KVIIIDASQSLECVTSDLKQALNHWLEKQ 209


>gi|329120408|ref|ZP_08249074.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327462092|gb|EGF08420.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 207

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 8/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+   FI+ +GI+G+GK+TH++ ++ +   +   V  TREPGGTP  E  R +LL     
Sbjct: 1   MHP-RFITLDGIDGSGKSTHLAAMRDWFAARGLPVLFTREPGGTPLGEELRRLLLDPAA- 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + G   E ++  AAR  H+++VI PAL +G  ++ DRF D+++AYQG         + +L
Sbjct: 59  QVGLRTETLLMFAARQQHLDDVILPALEQGVHVVSDRFTDATFAYQGGGRGLPEADIAAL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +    + + PD T+ILD+P ++   RV        +   D FE++      + RQ +LD 
Sbjct: 119 EHWVQRGLRPDLTLILDVPAEVSFARVAK------ARDKDRFEQEQAAFFLRVRQAYLDR 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A   P R  ++DS      V   +   +    +
Sbjct: 173 AAADPQRYRVIDSNRDKTEVRAAVETALAACFE 205


>gi|254425294|ref|ZP_05039012.1| thymidylate kinase [Synechococcus sp. PCC 7335]
 gi|196192783|gb|EDX87747.1| thymidylate kinase [Synechococcus sp. PCC 7335]
          Length = 237

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 29/243 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF---------LQRKNY--DVHVTREPGGTPAAEAAR 51
            G  I FEG EG GKTT +  L  +         L  K +   V +TREPGGT   +  R
Sbjct: 2   RGKLIVFEGGEGCGKTTQLQRLYDWIVQNKSWQLLLSKGHVAGVKMTREPGGTVLGKQLR 61

Query: 52  HVLLS--------CGVDEFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
            +LL+           D       +AE +++AA R  HVE V+ P L  G  +LCDR++D
Sbjct: 62  QLLLNESKLNEPRSANDALTPVTNKAELLLYAADRAQHVEEVLLPWLEAGYWVLCDRYID 121

Query: 101 SSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           S+ AYQG         + +L +I+   +  D T+ L++P ++GL R++ R         D
Sbjct: 122 STVAYQGYGRQLDLSLITTLNQIATAGLRGDLTLWLNVPPEVGLDRMRAR------GQAD 175

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
             E+  +  H++    F  +A+       +     +   VA +I  ++   +++     +
Sbjct: 176 RIEQASMAFHQRVHDGFAMLAKENATTVSVA-GDRTADEVAMSIQQVLQRRLKQWYPEWA 234

Query: 221 SKK 223
           + +
Sbjct: 235 TSQ 237


>gi|62185123|ref|YP_219908.1| thymidylate kinase [Chlamydophila abortus S26/3]
 gi|73920816|sp|Q5L5Y4|KTHY_CHLAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|62148190|emb|CAH63947.1| thymidylate kinase [Chlamydophila abortus S26/3]
          Length = 211

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++   LLK  L  +   V  TREPGG+   E  R  +L     E   
Sbjct: 1   MFIVIEGCEGSGKSSLTQLLKDKLMAEGKAVVATREPGGSSLGERVRDWILDPSTTELSP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F AAR  H+   I PAL  GKI++CDRF DS+  YQG        ++ +L    
Sbjct: 61  YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120

Query: 125 VQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V   +++P+ T +LD+P D GLKR Q + S       D FE + +  H K R+ FL +A 
Sbjct: 121 VGQKKILPNLTCLLDIPADEGLKRKQQQKSF------DKFENQSLAYHTKIREGFLSLAE 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ D   ++D+    +     ++    EL
Sbjct: 175 SRLDSYLVLDARQPIEESLNKVMTAYTEL 203


>gi|91788382|ref|YP_549334.1| thymidylate kinase [Polaromonas sp. JS666]
 gi|123164854|sp|Q12AK6|KTHY_POLSJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91697607|gb|ABE44436.1| thymidylate kinase [Polaromonas sp. JS666]
          Length = 225

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 30/227 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLFISFEGI+GAGK+THI+ L    + +   V +TREPGGTP AE  R ++L+   D
Sbjct: 1   MH-GLFISFEGIDGAGKSTHIAGLADAFRAQGRAVTLTREPGGTPLAEKLRDLVLN---D 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              +  EA++  AAR DH+  VI PAL+ G ++LCDRF D+++AYQG         L +L
Sbjct: 57  AMDSLTEALLIFAARRDHLVRVIAPALVRGDVVLCDRFTDATFAYQGAGRGFDLAVLATL 116

Query: 121 QEISVQE--------------------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           ++    +                    + P  T+  DLP +    R+Q       +   D
Sbjct: 117 EQWVQSDEGLLGDPAGNFPMKPEVETVIEPHLTVWFDLPPEEAALRLQG------ARVPD 170

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
            FE + +    +  + + D  +  P+R   ++++     V   +  +
Sbjct: 171 KFEAQPLEFFRRVAKGYSDRQQGHPERFARINASQPRDVVWQAVRQV 217


>gi|320538798|ref|ZP_08038475.1| thymidylate kinase [Serratia symbiotica str. Tucson]
 gi|320031143|gb|EFW13145.1| thymidylate kinase [Serratia symbiotica str. Tucson]
          Length = 212

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/217 (33%), Positives = 109/217 (50%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58
           M S  F+  EG+EGAGKTT    +   L+    + +  TREPGGTP AE  R +     G
Sbjct: 1   MKS-KFVVIEGLEGAGKTTARDTVASVLREHGVNNIVFTREPGGTPLAEKLRDLFKRGVG 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG    +    + 
Sbjct: 60  NELPTIKAEVLMLYAARVQLVETVIKPALERGAWVVGDRHDLSSQAYQGGGRGTDPQLML 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  +    PD T+ LDLP  IGL+R Q R        LD  E++ +    + R+ +L
Sbjct: 120 SLRDAVLGSFRPDLTLYLDLPPLIGLQRAQAR------GELDRIEQEVLPFFTRTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A    +    +D+    + V  +I   V   +Q++
Sbjct: 174 ALAAQN-ESIVTLDATQPLEQVTASIRACVSRWLQQQ 209


>gi|91793405|ref|YP_563056.1| thymidylate kinase [Shewanella denitrificans OS217]
 gi|91715407|gb|ABE55333.1| thymidylate kinase [Shewanella denitrificans OS217]
          Length = 215

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDE 61
           G F+  EG+EGAGK++ ++L+K  L     ++   TREPGGTP AE  R ++  +   D 
Sbjct: 10  GKFVVIEGLEGAGKSSAVALVKALLTSHTGHEPVCTREPGGTPLAERIRDLVKIADPQDP 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EAE ++  AAR   + NVI+PAL  G+ +L DR   SS AYQG         +++L 
Sbjct: 70  LCDEAECLLIYAARAQLIANVIKPALQRGEWVLGDRHNLSSLAYQGGGRGLMP-LVNTLS 128

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +Q   PD T+ LD+   +GL R  NR        LD  E++ +   E+ R+ +L +A
Sbjct: 129 QACLQGFKPDLTLYLDIEPSLGLTRAANR------GALDRIEQQALAFFERARETYLQLA 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                   ++D++ S ++V  +I   +   +
Sbjct: 183 SQDSS-ILVIDASQSLEAVHHDIKQALAARL 212


>gi|326316632|ref|YP_004234304.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323373468|gb|ADX45737.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 221

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 17/217 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+FEGI+GAGK++HI  +   L+R    V VTREPGGTP AE  R +LL+   + 
Sbjct: 3   RRGWFITFEGIDGAGKSSHIEAVAEALRRGGRTVTVTREPGGTPLAETLRALLLN---EA 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  E++V  A R DH+ +VI PAL+ G+++LCDRF D+++AYQG         L  L+
Sbjct: 60  MDALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLE 119

Query: 122 EISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            I+   +         P  T+  DL  D+   R++       +   D FE + V    + 
Sbjct: 120 RITQSGLQEGSDAILHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRV 173

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            Q + D A   P R   +D+    ++V   +++I+  
Sbjct: 174 AQGYADRAAADPGRFARLDADQPREAVRAQLMDILHR 210


>gi|241764588|ref|ZP_04762604.1| dTMP kinase [Acidovorax delafieldii 2AN]
 gi|241365951|gb|EER60577.1| dTMP kinase [Acidovorax delafieldii 2AN]
          Length = 225

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 110/216 (50%), Gaps = 18/216 (8%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+  GLFI+FEGI+GAGK++HI  L    + +   V VTREPGGTP AE  R ++L+   
Sbjct: 1   MSRPGLFITFEGIDGAGKSSHIEGLAEAFRAQGRTVTVTREPGGTPLAEKLRAMVLN--- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D   A  E+++  AAR DH+  VI PAL  G ++LCDRF D+++AYQG         L  
Sbjct: 58  DPMDALTESLLIFAARRDHLCQVIEPALARGDVVLCDRFTDATFAYQGAGRGFDLEVLSK 117

Query: 120 LQEISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           L+ +    +         PD T+  DL  +I  +R+        +   D FE + V    
Sbjct: 118 LELMVQTGLAQEPGFMRNPDLTVWFDLAPEIAAQRLAG------ARVPDRFEAQPVEFFR 171

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
           +  Q + D A   P R   +D+A     V   + ++
Sbjct: 172 RVAQGYADRAATAPQRFARLDAALDRHRVWQQLTSV 207


>gi|240103826|ref|YP_002960135.1| thymidylate kinase [Thermococcus gammatolerans EJ3]
 gi|259494283|sp|C5A1K2|KTHY_THEGJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|239911380|gb|ACS34271.1| Thymidylate kinase (dTMP kinase) (tmk) [Thermococcus gammatolerans
           EJ3]
          Length = 208

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 18/215 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+F+  EGI+GAGK+T   LL ++ ++K Y+V +T+EP  T   +  R ++L+ G +   
Sbjct: 2   GIFVVIEGIDGAGKSTQAKLLAKWFEKKGYEVILTKEPTDTAFGKLIRKLVLTGGREGII 61

Query: 61  ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  EAEA++FAA R +HV  +I+PAL  GK+++ DR+  SS AYQ  R     L L
Sbjct: 62  DGARISHEAEALLFAADRAEHVHKLIKPALESGKVVISDRYFYSSLAYQWARG----LDL 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L +++   V PD  ++LDLPV   ++R+  R    E   +       V + ++ R+ +
Sbjct: 118 QWLIDLNRFAVRPDLVVLLDLPVKESMRRINGRSIKTEFDKI-------VELQKRVRENY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L +A   P+   IV++ +S + +  +I+ +V + +
Sbjct: 171 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLVEQEI 204


>gi|315654563|ref|ZP_07907469.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333]
 gi|315491027|gb|EFU80646.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333]
          Length = 239

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 6/211 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF++FEG +G GKTT I+    +++ + +DV  TREPGGT    A R +LL  G  +
Sbjct: 29  TQGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--D 86

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AEA++FAA R  HV  +I PA+ +GK+++ DR+L SS AYQG         +  L 
Sbjct: 87  VSPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGDREIRDLS 146

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++P+ T++LDL  ++       + +       D  ER  +   E+ R+ FL ++
Sbjct: 147 LWATGGLVPNLTVLLDLDPEVA---AARQAADASLGSPDRMERAGIEFQERVREDFLRMS 203

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             Q D   +VD++     +A  +   + +L+
Sbjct: 204 EGQ-DTWLVVDASLPVAEIAAQVRLRLAQLL 233


>gi|269139439|ref|YP_003296140.1| thymidylate kinase [Edwardsiella tarda EIB202]
 gi|267985100|gb|ACY84929.1| thymidylate kinase [Edwardsiella tarda EIB202]
 gi|304559335|gb|ADM41999.1| Thymidylate kinase [Edwardsiella tarda FL6-60]
          Length = 213

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 9/215 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62
            FI  EG+EGAGKTT   ++   L+R    +V  TREPGGTP AE  R ++      +  
Sbjct: 4   KFIVIEGLEGAGKTTARDVVVDELRRHGIQEVVFTREPGGTPLAEHLRTLVKEGVEGETL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR+  +ENVI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  TDRAEVLMLYAARVQLIENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHLMQTLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+P   GL R ++R        LD  ER+ +   E+ R  +L +A 
Sbjct: 124 TVLGDFKPDLTLYLDIPPQQGLARARSR------GELDRIERESLAFFERTRDRYLALAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                   +D+A   + V+  I   +   +  + +
Sbjct: 178 AD-ATIVTLDAAQPLEQVSAAIRRALRAWLASQEA 211


>gi|258625441|ref|ZP_05720334.1| thymidylate kinase [Vibrio mimicus VM603]
 gi|258582245|gb|EEW07101.1| thymidylate kinase [Vibrio mimicus VM603]
          Length = 212

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58
           MN+  FI  EG+EGAGK+T I ++   L +   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D    E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDTSFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A +  +   ++D+A S + V+ +I   +   + +
Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTALEYWLSR 208


>gi|71279228|ref|YP_269022.1| thymidylate kinase [Colwellia psychrerythraea 34H]
 gi|123632593|sp|Q482J5|KTHY_COLP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71144968|gb|AAZ25441.1| thymidylate kinase [Colwellia psychrerythraea 34H]
          Length = 212

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 8/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           M++G FI  EG+EGAGK++ I++++  L +   +   TREPGGTP AE+ R ++ S    
Sbjct: 1   MSTGKFIVIEGMEGAGKSSAIAVIESTLNKHGIEYINTREPGGTPLAESLRDMVKSVDHQ 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++   E E ++  A+R   + N I PAL  GK ++ DR   SS AYQG         +++
Sbjct: 61  EKLTVETELLLMYASRSQLLANKILPALAAGKWVIGDRHDLSSRAYQGGGRGFDETIMNT 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + +I+++   PD T+ LD+   IGL R + R        LD  E + +    +    + +
Sbjct: 121 ISDITLKGFRPDITLYLDIDPHIGLSRAKARGD------LDRIELEKMEFFIRVHNKYRE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A    D    VD+A +   V  ++   V   +
Sbjct: 175 LAEQD-DSIITVDAAQAMLKVHQDVEKAVIGFI 206


>gi|269967358|ref|ZP_06181419.1| thymidylate kinase [Vibrio alginolyticus 40B]
 gi|269828066|gb|EEZ82339.1| thymidylate kinase [Vibrio alginolyticus 40B]
          Length = 210

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 115/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGK+T I  +   L+     D+  TREPGGTP AE  R ++     
Sbjct: 1   MMKANFIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 61  GEELKDMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMK 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 121 NLRDTTLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +IA   P    I+++  + + V+ +I + + E + ++
Sbjct: 175 EIAHADPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 210


>gi|148241353|ref|YP_001226510.1| thymidylate kinase [Synechococcus sp. RCC307]
 gi|166223123|sp|A5GQJ8|KTHY_SYNR3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147849663|emb|CAK27157.1| Thymidylate kinase [Synechococcus sp. RCC307]
          Length = 212

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
            G F+  EGI+G GKTT +  L  +L           +  TREPGGT   +A R +LL  
Sbjct: 2   RGRFLVLEGIDGCGKTTQLKALADWLPASGLMPSGAQLITTREPGGTALGQALRQLLLHP 61

Query: 58  GVDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             ++  A  AE +++AA R  HV+  + PAL  G  +L DR+  S+ AYQG         
Sbjct: 62  PEEQAPATRAELLLYAADRAQHVQTRLEPALAAGDWVLSDRYCGSTAAYQGYGRGLDLDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L++++   + PD  + L+L  ++  +R       R     D  E + +    +  Q 
Sbjct: 122 ITQLEQLATAGLQPDLCLWLELSPELAAQR-------RSGQQQDRIEAEGLAFLARVHQG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           F ++++  P     VD++   + V   + ++V E ++
Sbjct: 175 FAELSQR-PL-WRRVDASLPPEQVHQQVQHLVREGLE 209


>gi|194336672|ref|YP_002018466.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693358|sp|B4SAG3|KTHY_PELPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|194309149|gb|ACF43849.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 217

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/218 (34%), Positives = 112/218 (51%), Gaps = 4/218 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L   L  +  +  V REPGGT  AE  R +LL         
Sbjct: 1   MLITFEGIDGAGKSTQIKELVHALGLQGIEAVVLREPGGTTVAEKIRQILLESSHG-ITP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V+ VIRPAL  GK ++ DRF DS+ AYQG         L S+  IS
Sbjct: 60  VGELLLFSASRAELVQEVIRPALASGKTIILDRFFDSTTAYQGYGRGIDMELLRSIIAIS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LDL  +  LKR  ++ S+    E   LD  ER  +  +   R+ +LDI 
Sbjct: 120 TCGITPDITFYLDLEPEEALKRKYSKTSIPLAFEGEELDRMERSGLEFYRNVRRGYLDIK 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           + +  R   +++      +   IL ++ E     ++P+
Sbjct: 180 QLENRRFVQLNALDPVAVIHGKILALLGERFPSFLNPV 217


>gi|307292799|ref|ZP_07572645.1| thymidylate kinase [Sphingobium chlorophenolicum L-1]
 gi|306880865|gb|EFN12081.1| thymidylate kinase [Sphingobium chlorophenolicum L-1]
          Length = 208

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 85/203 (41%), Positives = 109/203 (53%), Gaps = 5/203 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FIS EG EGAGK+T I  L   L+++  +V  TREPGG+  AEA R +LL+ G D
Sbjct: 1   MTQGRFISLEGGEGAGKSTQIRALAAALRQRGLEVVETREPGGSEGAEAIRALLLTGGAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +   AEA++FAAAR DHVE  IRPAL  G  +L DRFLDSS AYQG  D S    L +L
Sbjct: 61  RWSPRAEALLFAAARADHVERTIRPALDRGAWVLSDRFLDSSRAYQGMGDLSDADIL-AL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I     +PD T+ L LP      R ++R    +    D    +D   H+   + F   
Sbjct: 120 HRIGSGGFLPDRTLFLTLPEAEATARARSR----DGDASDRIGGRDPAFHQAVARAFTRF 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATN 203
           A  +P R   VD+A    +V   
Sbjct: 176 AEQEPGRFLTVDAAGDSAAVTER 198


>gi|14591458|ref|NP_143538.1| thymidylate kinase [Pyrococcus horikoshii OT3]
 gi|6016461|sp|O59366|KTHY_PYRHO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|3258125|dbj|BAA30808.1| 205aa long hypothetical thymidylate kinase [Pyrococcus horikoshii
           OT3]
          Length = 205

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/214 (35%), Positives = 120/214 (56%), Gaps = 16/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
            G FI  EGI+G+GKTT   LL  + + K Y+V +T+EP  +   +  R ++L       
Sbjct: 2   RGYFIVLEGIDGSGKTTQAKLLAEWFEDKGYEVLLTKEPTDSELGKLIRRIILEESVIDG 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   EAEA++FAA R +HV+ +I PAL EGK+++CDR+  SS AYQ  R     L L+ 
Sbjct: 62  SKISYEAEALLFAADRAEHVKKIILPALSEGKVVICDRYFYSSLAYQWARG----LDLNW 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +++     PD  I+LDLPV   L+R++ R +L E   +       V +  K R  +L 
Sbjct: 118 LIQVNSFAPRPDLAILLDLPVKESLRRIKLRGTLTEFDKI-------VELQRKVRHNYLK 170

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW-ELV 212
           +A   P+   IV++  S + + ++I+ +V  EL+
Sbjct: 171 LAEMFPE-MRIVNALSSIEDIHSDIVALVKHELL 203


>gi|328474618|gb|EGF45423.1| thymidylate kinase [Vibrio parahaemolyticus 10329]
          Length = 209

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           FI  EG+EGAGK+T I  +   L++   + +  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPCIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    ++++  S + V+ +I + + E + ++
Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209


>gi|229514876|ref|ZP_04404337.1| thymidylate kinase [Vibrio cholerae TMA 21]
 gi|229348856|gb|EEO13814.1| thymidylate kinase [Vibrio cholerae TMA 21]
          Length = 212

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG+EGAGK+T I ++   L++   D    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVVVETLKQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 60  GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++  +  D   ++D+A S + V  +I   + + + +
Sbjct: 174 ELTNSD-DSVVMIDAAQSIEQVTAHIRRALQDWLSQ 208


>gi|308186414|ref|YP_003930545.1| Thymidylate kinase [Pantoea vagans C9-1]
 gi|308056924|gb|ADO09096.1| Thymidylate kinase [Pantoea vagans C9-1]
          Length = 210

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MNS  FI  EG+EGAGKTT    +   L  +   D+  TREPGGTP AE  R ++     
Sbjct: 1   MNS-KFIVIEGLEGAGKTTARDAIVATLHARGISDLVFTREPGGTPLAEQLRVLVKQGIE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSGLMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++  + +  PD T+ LD+  +IGL+R + R        LD  E++ +   E+ R  +L
Sbjct: 120 TLRDAVLGDFRPDLTLYLDVTPEIGLQRARAR------GELDRIEQESLRFFERTRARYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A   P     +D+  S   V  ++   +   + ++
Sbjct: 174 TLAAEDP-TILTIDATQSLTEVTASLQVALASWLAEQ 209


>gi|241895200|ref|ZP_04782496.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313]
 gi|241871506|gb|EER75257.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313]
          Length = 214

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGG--TPAAEAARHVLLSCGV 59
           SG FI+FEG +GAGKT+ +  +   L       + +TREPGG  +  AEA R V+L   +
Sbjct: 2   SGTFITFEGPDGAGKTSVLRAIVERLAPLLGDKLVLTREPGGKDSQVAEAIRDVVLDPNL 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A  EA+++AA+R  H+ + + PAL   K+++ DR++DSS AYQG         +  
Sbjct: 62  PSMDAWTEALLYAASRRQHLVDTVLPALAADKVVVSDRYVDSSIAYQGGGRRLGIEAVTE 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + + + +MP  TI LD+  ++GL+R+Q          ++  + + +  H++    +  
Sbjct: 122 INQFATKGIMPTATIYLDIRPEVGLQRIQEN----RQDEINRLDVEKLSFHQRVTDAYHQ 177

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +A   P+R  I+++      V T+    +  ++
Sbjct: 178 LATQYPERFLIINAEQDLADVITDTWTALMPIL 210


>gi|270261351|ref|ZP_06189624.1| thymidylate kinase [Serratia odorifera 4Rx13]
 gi|270044835|gb|EFA17926.1| thymidylate kinase [Serratia odorifera 4Rx13]
          Length = 211

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/216 (34%), Positives = 110/216 (50%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M S  F+  EG+EGAGKTT    +   L+     D+  TREPGGTP AE  R +      
Sbjct: 1   MKS-KFVVIEGLEGAGKTTARDTVVNVLREHGINDIVFTREPGGTPLAEKLRDLFKRGID 59

Query: 60  DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E    +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  +GL+R + R        LD  E++ +   E+ R  +L
Sbjct: 120 SLRDTVLGDFRPDLTVYLDLPPLLGLQRARAR------GELDRIEQEALPFFERTRSRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A    D    VD++ S + V   I   + + +Q+
Sbjct: 174 ELAAQD-DSIVTVDASQSLEQVTAAIRRCLSQWLQQ 208


>gi|153838848|ref|ZP_01991515.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810]
 gi|308095583|ref|ZP_05906946.2| dTMP kinase [Vibrio parahaemolyticus Peru-466]
 gi|308125924|ref|ZP_05778121.2| dTMP kinase [Vibrio parahaemolyticus K5030]
 gi|149747732|gb|EDM58632.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810]
 gi|308089015|gb|EFO38710.1| dTMP kinase [Vibrio parahaemolyticus Peru-466]
 gi|308114687|gb|EFO52227.1| dTMP kinase [Vibrio parahaemolyticus K5030]
          Length = 209

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           FI  EG+EGAGK+T I  +   L++   + +  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    ++++  S + V+ +I + + E + ++
Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209


>gi|114775378|ref|ZP_01450946.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1]
 gi|114553489|gb|EAU55870.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1]
          Length = 211

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 5/208 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+FEG +G+GK+T + L   +L      +  T EPG T      R +LLS       
Sbjct: 2   GKLITFEGGDGSGKSTQLRLTADWLTSIGKRIITTFEPGDTQLGAKIRQLLLSGEDVPV- 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121
            E E ++F A R  HV  V++PAL  G  +LCDR+ DS+ AYQ       +    L  + 
Sbjct: 61  PECEMLLFLADRAQHVREVVQPALQRGDWVLCDRYSDSTLAYQLAARKLGAADELLRQML 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   V PD T+  DLPV   L+R++ R    E +     + + +  H++    F   A
Sbjct: 121 TFAECGVTPDLTLWFDLPVSAALERMRQRQQAGEKST--RLDDEALSFHQRVTAAFASQA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
             +P R   VD+    +SV   + +I+ 
Sbjct: 179 EAEPGRMMRVDAVGDIKSVEQQVHHIIR 206


>gi|262404371|ref|ZP_06080926.1| thymidylate kinase [Vibrio sp. RC586]
 gi|262349403|gb|EEY98541.1| thymidylate kinase [Vibrio sp. RC586]
          Length = 212

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58
           MN+  FI  EG+EGAGK+T I ++   L +   +    TREPGGT  AE  R ++     
Sbjct: 1   MNA-KFIVIEGLEGAGKSTAIQVIVETLHQHGIEQITRTREPGGTVLAEKLRALVKEDHP 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEELQDITELLLVYAARVQLVENVIKPALAQGFWVVGDRHDMSSQAYQGGGRQIALSTMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD T+ LD+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERARQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A    D    VD+  S + V+ +I   + + + +
Sbjct: 174 ELAECD-DTVIWVDAEQSIEQVSKDIRTALEDWLNR 208


>gi|261415858|ref|YP_003249541.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261372314|gb|ACX75059.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327609|gb|ADL26810.1| dTMP kinase [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 210

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 7/215 (3%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M +   F S EGI+G+GK+T I +L R L+ + + V   REPGG   +E  R +LL    
Sbjct: 1   MKTAKKFFSLEGIDGSGKSTQIDMLVRVLESEGHKVVRLREPGGAKISERIRELLLDPAF 60

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 + E +++ AAR   +  +I+PAL  G I++ DRF  S++AYQG         + 
Sbjct: 61  KGIMADDTELLLYNAARAQVIHEIIKPALDAGNIVIADRFAWSTFAYQGYARGLGADKVQ 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L E++     P+ T++LDL V+   KR+  R         D  E +     E+ R+ +L
Sbjct: 121 RLTELTCGGCFPELTVVLDLTVEASRKRMAIR-----GGAPDRLESEKAEFFERVREGYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              R+  D   +V++  +   V  ++L+++   ++
Sbjct: 176 AAGRDYSDCVSVVNADRTPDEVHQDVLSLIKAKLK 210


>gi|260899207|ref|ZP_05907602.1| dTMP kinase [Vibrio parahaemolyticus AQ4037]
 gi|308108494|gb|EFO46034.1| dTMP kinase [Vibrio parahaemolyticus AQ4037]
          Length = 209

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           FI  EG+EGAGK+T I  +   L++   + +  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQINASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   IGL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    ++++  S + V+ +I + + E + ++
Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209


>gi|312882454|ref|ZP_07742195.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369854|gb|EFP97365.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 211

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/216 (34%), Positives = 113/216 (52%), Gaps = 9/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M S  FI  EG+EGAGK+T I  +++ L       +  TREPGGT  AE  R ++     
Sbjct: 1   MKSAKFIVIEGLEGAGKSTAIRAVEQSLGNLGISQIQKTREPGGTELAEKLRSLVKEEHP 60

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E      E ++  AAR+  VEN+I+PAL     ++ DR   SS AYQG      +  + 
Sbjct: 61  GEVLQDMTELLLMYAARVQLVENIIKPALENDVWVIGDRHDMSSQAYQGGGRQIANETMS 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L++ ++    P+ TI LD+   +GL+R + R        LD  E+ D+   E+ RQ +L
Sbjct: 121 LLKQTALGCFRPNLTIYLDIEPKLGLERARGR------GELDRIEKMDLGFFERTRQRYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A+   D   IVD++ S   VA +I  +V + VQK
Sbjct: 175 ELAKED-DSVFIVDASQSIAQVAESIDKLVTDWVQK 209


>gi|209695681|ref|YP_002263610.1| thymidylate kinase [Aliivibrio salmonicida LFI1238]
 gi|238057695|sp|B6EJ04|KTHY_ALISL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|208009633|emb|CAQ79929.1| thymidylate kinase [Aliivibrio salmonicida LFI1238]
          Length = 210

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 9/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE-F 62
            FI  EG+EGAGK+T I  +   L +        TREPGGTP AE  R ++     DE  
Sbjct: 3   KFIVIEGLEGAGKSTAIKNVLATLAKHGITAPVTTREPGGTPLAEKMRELVKQGHPDEPL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR   V NVI+PAL  G  ++ DR   SS AYQG         + +++ 
Sbjct: 63  TDMAELLLLYAARAQLVGNVIKPALAAGNWVVGDRHDLSSQAYQGGGRGFDRELMATMKR 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI +D+   +GL+R   R        LD  E+  +   E+ R+ +L+ A 
Sbjct: 123 TVLGDFTPDLTIYMDIDPKLGLQRASAR------GELDRIEQMKLDFFERSRERYLEFAN 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           N  +    +D+     +V  +I+  +   +
Sbjct: 177 ND-ESIITIDAGQDLDTVTASIIAALEIWL 205


>gi|330444525|ref|YP_004377511.1| thymidylate kinase [Chlamydophila pecorum E58]
 gi|328807635|gb|AEB41808.1| thymidylate kinase [Chlamydophila pecorum E58]
          Length = 206

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 8/207 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT+   +L + L  +   + +TREPGG P  E  R ++L     +   
Sbjct: 1   MFIVLEGGEGAGKTSLAEMLHQKLVSEGRSIVMTREPGGCPLGERIRELILQASETKVSQ 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122
             E  +F A R  H++  I PAL  G I+LC+RF DS+  YQG  +     F+  L  Q 
Sbjct: 61  YTELFLFLATRAQHIQETIIPALERGDIVLCERFHDSTIVYQGIAEGLGMSFVSDLCYQA 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I  +  +PD  ++LD+P +IGL R   + +      LD FE+  +  HE  R  FL +A 
Sbjct: 121 IGPKPFLPDLVVLLDVPAEIGLSRKVQQKT------LDKFEKNPLSYHEAIRSGFLALAN 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
             PDR  I+D+  S +     +L  + 
Sbjct: 175 ANPDRYLILDARQSLEESVKKVLQHIQ 201


>gi|14520694|ref|NP_126169.1| thymidylate kinase [Pyrococcus abyssi GE5]
 gi|13629362|sp|Q9V1E9|KTHY_PYRAB RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|5457910|emb|CAB49400.1| tmk thymidylate kinase (dTMP kinase) [Pyrococcus abyssi GE5]
          Length = 205

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 16/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
            G F+  EGI+G+GKTT   LL  + + + +DV +T+EP  T      R ++L       
Sbjct: 2   RGYFVVLEGIDGSGKTTQAKLLAEWFEEQGWDVLLTKEPTDTEFGRLIRELVLKNSIIDG 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                EAEA++FAA R +HV+ VI PAL +GK+++CDR+L SS AYQ  R     L L+ 
Sbjct: 62  SRISYEAEALLFAADRAEHVKKVILPALEKGKVVICDRYLYSSLAYQWARG----LSLEW 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +I+     PD  I+LDLPV   ++R + R ++ E   L       + +  K R  +L 
Sbjct: 118 LMQINSFAPRPDLAILLDLPVKESIRRTKARGNMSEFDKL-------LELQRKVRMNYLK 170

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW-ELV 212
           +A    +   IV++  S + V  +I+ +V  EL+
Sbjct: 171 LAEMFKE-MRIVNAMASVEEVHEDIVALVKHELL 203


>gi|299143254|ref|ZP_07036334.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517739|gb|EFI41478.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 203

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 10/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F++FEG +G GK+T  +L+   L+ + YDV  TREPGGT  +E  R+++L     E 
Sbjct: 2   RGIFVTFEGPDGCGKSTIANLVYEKLKAE-YDVVKTREPGGTKISEKIRNIILDNENIEM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  EA+++AA+R  HVE  I PAL  G I+LC+RF+ SS AYQG         ++++ +
Sbjct: 61  TSRTEALLYAASRAQHVEEKILPALKNGSIVLCERFVLSSIAYQGFGRGLGRESIENINK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  EV PD   + D     G   + +     E    D  E      H + ++ + ++A+
Sbjct: 121 FATGEVEPDVVFLFD----TG--NISSENRKLEFGG-DRIEICGNEFHSRVKEAYRELAK 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               +  ++D+    + V  + L+I+++ ++
Sbjct: 174 E--KKYCVIDATRGIEEVLNDCLDILYKKLE 202


>gi|315179582|gb|ADT86496.1| thymidylate kinase [Vibrio furnissii NCTC 11218]
          Length = 209

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  +I  EG+EGAGK+T I  +   L      D+  TREPGGT  AE  R ++     
Sbjct: 1   MNS-KYIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E      E ++  AAR+  VENVI+PAL +G  ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDMTELLLMYAARVQLVENVIKPALQQGHWVVGDRHDMSSQAYQGGGRQIARETMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A    +    +++  S + V  +I   +   + +
Sbjct: 174 ELAAGD-ESVVTINAEQSIEQVTHDIKQALESWLNR 208


>gi|163839161|ref|YP_001623566.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209]
 gi|162952637|gb|ABY22152.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209]
          Length = 221

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 7/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SG FI+FEG +GAGK+T   LL   L+     V +TREPGGTP  E  R ++L  G  +
Sbjct: 18  RSGFFIAFEGGDGAGKSTQARLLAAALKDLGRQVVLTREPGGTPVGEKLRSLVLDHGQGQ 77

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FAAAR  H E VIRPAL EGK+++ DR++DSS AYQG         +  + 
Sbjct: 78  IDARTEALLFAAARAAHAEQVIRPALAEGKVVITDRYIDSSIAYQGAGRDLGEDEVRKVN 137

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   ++P+ TI+LD+  + G  R       R  A  D  E +    H++ RQ FL++A
Sbjct: 138 EWATAGLLPELTILLDVAANEGRNR-------RAGARPDRLESEPDNFHDRIRQAFLNLA 190

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P +  I+++  S   +   IL    EL+
Sbjct: 191 SARPKQYLILNARLSIDELQQAILQRAKELL 221


>gi|319779570|ref|YP_004130483.1| Thymidylate kinase [Taylorella equigenitalis MCE9]
 gi|317109594|gb|ADU92340.1| Thymidylate kinase [Taylorella equigenitalis MCE9]
          Length = 204

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+ EGI+GAGK++HI  +  F +    +V VTREPGG   +EA R +LL       
Sbjct: 2   RGYFITLEGIDGAGKSSHIEYIVDFFESLGREVVVTREPGGNALSEALRGILL---TQPM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  E ++  A+R + V  +I PAL EGKI++ DRF DS+ AYQG         ++ L+ 
Sbjct: 59  NSLTEVLLMFASRSESVYGIILPALREGKIVISDRFTDSTLAYQGGGRDFSIDVINDLKN 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I   ++ PD T++ D+P+++   R+ N         +D FE  D     + R  +L +A 
Sbjct: 119 IVHPDLTPDLTLLFDVPLEVARDRLSN------GRSVDKFEVLDEDFFNRVRNQYLSMAN 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +PDR  I+DS+HS   V   +  ++   +
Sbjct: 173 YEPDRIKIIDSSHSVTVVRRLVNQVLMNFI 202


>gi|299820920|ref|ZP_07052809.1| thymidylate kinase [Listeria grayi DSM 20601]
 gi|299817941|gb|EFI85176.1| thymidylate kinase [Listeria grayi DSM 20601]
          Length = 217

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 66/195 (33%), Positives = 110/195 (56%), Gaps = 4/195 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ EG +G+GKTT  + +   L  +N     TREPGG+P +E  R V+L  G +  
Sbjct: 9   SGFFITLEGPDGSGKTTVGNKIAEKLTAENIAYIKTREPGGSPISEKLREVILGIGNEAM 68

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++ AAAR  HV   IRPAL E  ++LCDRFLDSS AYQ    +     + ++  
Sbjct: 69  DPRTEVLLIAAARRQHVVETIRPALAENLVVLCDRFLDSSLAYQAGGRNLDMDEVLAINH 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +V++ MPD T  LD+P ++GL+R+       +   ++  +++D++ H++  + + ++  
Sbjct: 129 YAVEDTMPDRTYYLDVPAEVGLERIAAN----KGREINRLDQEDIVYHQRVGRAYAEVMN 184

Query: 183 NQPDRCHIVDSAHSF 197
             P+R   +D+  + 
Sbjct: 185 RFPERFKRMDAMQAP 199


>gi|116071493|ref|ZP_01468761.1| Thymidylate kinase [Synechococcus sp. BL107]
 gi|116065116|gb|EAU70874.1| Thymidylate kinase [Synechococcus sp. BL107]
          Length = 209

 Score =  228 bits (582), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 15/217 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
           +G FI  +GI+G GK+T I  L ++L           +  TREPGGTP  ++ R +LL  
Sbjct: 2   TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTARLVCTREPGGTPLGQSIRELLLHT 61

Query: 58  GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             D+     AE +++AA R  HV++VIRPAL+ G  +L DRF  S+ AYQG         
Sbjct: 62  EADQVPSVTAELLLYAADRAQHVDSVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRPL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+   + PD T+ L +PV++ L+R       R     D  E +      +    
Sbjct: 122 ITRLESIATTGLEPDLTVWLMVPVEVSLQR-------RHGEKEDRIEAEGRAFLHRVADG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           F  +A  +      +D+  S   ++  +  I+ E +Q
Sbjct: 175 FSALAEQR--NWCRLDAQQSVSQLSQELEQILRESLQ 209


>gi|319399639|gb|EFV87893.1| thymidylate kinase [Staphylococcus epidermidis FRI909]
          Length = 203

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 8/208 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG EGAGKT+ I  +   L ++ YD+  TREPGG   +E  R ++L    +     
Sbjct: 4   FITFEGPEGAGKTSVIKEVSERLAKE-YDIVTTREPGGVLTSEEIRRIVLDG--ESIDIR 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++FAA+R +H+   I P+L   KI+LCDR++DSS AYQG         +  L E ++
Sbjct: 61  TEAMLFAASRREHLVEKIIPSLQADKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEFAI 120

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + PD TI LD+  +IG +R+     L+ +   +  +++D + HEK  + +  +  + P
Sbjct: 121 NGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISDNP 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R   V++ HS   V       + + ++
Sbjct: 176 HRFIKVNANHSLDKVVEETYQSIIKYLK 203


>gi|160946460|ref|ZP_02093669.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270]
 gi|158447576|gb|EDP24571.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270]
          Length = 209

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 9/215 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+FEG +G GKT+ ++L+K + +  N  +  TREPGGT  +E  R ++LS       
Sbjct: 2   GLFITFEGPDGCGKTSIMNLIKEYYKS-NEKIIFTREPGGTKISEKIREIILSNDNSNMS 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++++A+R  H++ +I+P L +G I++ DRF+ SS AYQG         +  + + 
Sbjct: 61  PRTEALLYSASRAQHIDELIKPNLDKGNIVISDRFVLSSLAYQGGGRELGVENVKKINDF 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  V PD  I   +     LKR             D  E      H +    ++++   
Sbjct: 121 AINGVNPDMIIFFYVDPLTTLKRKSLNVDA------DRLELSGDDFHSRVYDTYMELLEK 174

Query: 184 QPDR--CHIVDSAHSFQSVATNILNIVWELVQKRV 216
             D      VD+  S   V  ++ NI+ E +++ +
Sbjct: 175 MKDEKVLKKVDATKSMSEVFEDVKNIIDEKLEELL 209


>gi|332157932|ref|YP_004423211.1| thymidylate kinase [Pyrococcus sp. NA2]
 gi|331033395|gb|AEC51207.1| thymidylate kinase [Pyrococcus sp. NA2]
          Length = 205

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 16/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
            G FI FEGI+G+GKTT   LL ++ +   Y+V +T+EP  T   +  R ++L       
Sbjct: 2   KGYFIVFEGIDGSGKTTQAKLLAKWFRDNGYEVLLTKEPTDTEFGKLIRKLVLEGSIIDG 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                EAEA++FAA R +HV+ +I PAL EGKI++CDR+L SS AYQ  R     L L+ 
Sbjct: 62  SRISYEAEALLFAADRAEHVKKIILPALREGKIVICDRYLYSSLAYQWARG----LDLEW 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +++      D  I+LDLP+   L+R++ R    E   L       V +  K R+ +L 
Sbjct: 118 LIKVNSFAPRADLVILLDLPITKSLERIRGRVIKTEFDKL-------VELQRKVRENYLK 170

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW-ELV 212
           +A   P+   +VD+  + + V  N++ +V  EL+
Sbjct: 171 LAEMFPE-IRVVDAMANIEDVHNNVVTLVKHELL 203


>gi|325849205|ref|ZP_08170656.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480205|gb|EGC83272.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 209

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GL I FEG +G+GKTT +  +   L +  YD++  REPGGT  +E  R ++L     + 
Sbjct: 2   NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA+R   +E  +RP L +G I+LCDRF+ SS  YQG         +  + +
Sbjct: 62  SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQGIGRGLGIDEVKKIND 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ E+  D T+ L++     + R +  +        D  E +D   H+K  + ++D+++
Sbjct: 122 FAIGEIKADLTLFLNIDYKTAIDRKRKNF------VSDRLENEDDSFHKKTYEGYIDLSK 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              D    +D+  S   V  N ++ +   ++++
Sbjct: 176 RFKDEIISIDANKSLDIVVDNCIDTIKTYIKEK 208


>gi|118594886|ref|ZP_01552233.1| thymidylate kinase [Methylophilales bacterium HTCC2181]
 gi|118440664|gb|EAV47291.1| thymidylate kinase [Methylophilales bacterium HTCC2181]
          Length = 204

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 124/212 (58%), Gaps = 9/212 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN  LFIS EG++GAGKTTHI  ++ + + K    ++TREPGGT   E  R        +
Sbjct: 1   MNKPLFISLEGVDGAGKTTHIHFIEDYFRTKGLPFYMTREPGGTDLGEKLRL---LLLHE 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A  E ++  AAR +H++ +I+P L +G  ++ DRF D++YAYQ          +D L
Sbjct: 58  EMDALTETMLMFAARCEHIQTIIKPKLDQGITVVSDRFTDATYAYQAGGKGVDARSIDVL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  +++ PD T + D+PV+I ++R++      ++  +D FER++ + H+  R  +LD+
Sbjct: 118 KSLVQKDLDPDLTFLFDVPVEISIERLK------DTRTMDKFEREEPIFHQSIRNAYLDL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A++ P R H+++  H+ +++   I  I+   +
Sbjct: 172 AQSFPQRFHVLNGTHAIEAIQDEIKLILDRRL 203


>gi|311112929|ref|YP_003984151.1| thymidylate kinase [Rothia dentocariosa ATCC 17931]
 gi|310944423|gb|ADP40717.1| thymidylate kinase [Rothia dentocariosa ATCC 17931]
          Length = 263

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 7/215 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI FEG +GAGKTT ++ L+  L+ + Y V  TREPGGTP  EA R ++L  G  E
Sbjct: 32  RRGLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSE 91

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A AEA++FAA+R  H    IRPAL  G ++L DR+LDSS AYQG   +     +  L 
Sbjct: 92  VDARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQGIGRNLGKDTITDLS 151

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + ++++P  TI+LD+P+    +R+ +R        +D  E +      +    F DIA
Sbjct: 152 RWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKARVHTAFADIA 205

Query: 182 RNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215
           R   D  H +VD   S  +V   +L +V  L++ R
Sbjct: 206 RQNADGAHYVVDGCGSVDAVHERVLEVVRPLLESR 240


>gi|284007284|emb|CBA72610.1| thymidylate kinase [Arsenophonus nasoniae]
          Length = 211

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           M S  +I  EG+EGAGKTT I  + + L      ++  TREPGGTP AE  R ++     
Sbjct: 1   MKS-RYIVIEGLEGAGKTTAIKTVVQTLATVGITEIDFTREPGGTPLAEKLRQLIKHGIA 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++   +AE ++  AAR+  +ENVI+PAL +G+ ++ DR   SS AYQG         + 
Sbjct: 60  EEKVTDKAELLMLYAARIQLIENVIKPALAKGRWVIGDRHDLSSQAYQGGGRGLSPELMK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+   + +  PD T+ LD+   +GL+R ++R        LD  E++ +   ++ RQ +L
Sbjct: 120 VLRNTILDDFRPDLTLYLDIEPALGLQRARDR------GELDRIEKESLDFFKRTRQRYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A    D    +D+  S + V   I +++   +  +
Sbjct: 174 ELAAED-DTIITIDANQSLEEVQKTIHHVLSNWLTAQ 209


>gi|308049573|ref|YP_003913139.1| thymidylate kinase [Ferrimonas balearica DSM 9799]
 gi|307631763|gb|ADN76065.1| thymidylate kinase [Ferrimonas balearica DSM 9799]
          Length = 207

 Score =  227 bits (581), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G FI  EG+EGAGK+T I+++ ++L+++    ++  TREPGGTP AE  R +      +
Sbjct: 4   QGTFIVIEGLEGAGKSTAIAVVDQYLKQRFPEREIVHTREPGGTPLAEEIRAIWKQPREE 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++  A R   VE+VI+PAL  G I++ DR   SS AYQG         +  L
Sbjct: 64  AMAPMTELLMVYACRAQLVESVIKPALARGAIVVGDRHDLSSKAYQGGGRGL-AEPVARL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +++ +  PD T+ LD+   +GL R + R        LD  E++ +   ++ R  +   
Sbjct: 123 SALTLGDFAPDLTLYLDIDPAVGLARARAR------GELDRIEQEALAFFQRARATYQAE 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A   P R   +D+  S + V  +++N +
Sbjct: 177 AAADP-RIVTIDAGQSLEQVHQSLINAL 203


>gi|91228553|ref|ZP_01262473.1| thymidylate kinase [Vibrio alginolyticus 12G01]
 gi|91187877|gb|EAS74189.1| thymidylate kinase [Vibrio alginolyticus 12G01]
          Length = 209

 Score =  227 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           FI  EG+EGAGK+T I  +   L+     D+  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    I+++  + + V+ +I + + E + ++
Sbjct: 179 DPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 209


>gi|187478259|ref|YP_786283.1| thymidylate kinase [Bordetella avium 197N]
 gi|115422845|emb|CAJ49373.1| thymidylate kinase [Bordetella avium 197N]
          Length = 214

 Score =  227 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 9/209 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG++GAGK+TH + L   LQ + +DV  TREPGGTP  E  R         + G
Sbjct: 12  GRFITLEGVDGAGKSTHTTWLVDTLQERGFDVVSTREPGGTPLGERLRE---LLLTQDMG 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E ++  AAR +H+++VI PAL  G  ++CDR+ D++YAYQG         +  L++ 
Sbjct: 69  LDTETLLMFAARSEHLQHVIVPALARGAWVVCDRYTDATYAYQGGGRGLGAARVALLEQW 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               + PD T + D+P+ +   R+           LD FE++     E+ R  +   A  
Sbjct: 129 LQPPLRPDLTWLFDVPLAVARARMAG------ERQLDRFEQEAEAFFERTRTAYHARAAA 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P R HI+D++     V   +   + + +
Sbjct: 183 EPGRMHIIDASRPLDEVRRALEQDLLQFL 211


>gi|313902253|ref|ZP_07835659.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965]
 gi|313467483|gb|EFR62991.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965]
          Length = 250

 Score =  227 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 9/215 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG EG+GK+T  +++  +L+ +     + REPGGT   E  R +LL      
Sbjct: 45  RRGWFITLEGGEGSGKSTQAAVVMDWLRSRGIPSRLVREPGGTALGERLRELLLDGAGRP 104

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++FAAAR   VE VI PAL+ G+ ++CDR++DSS AYQG         + S+ 
Sbjct: 105 V-PMAEMLMFAAARAQLVETVILPALLAGETVVCDRYVDSSLAYQGAGLGLGGTTVWSVN 163

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            ++ + ++PD T++ D P D+   R++           D  E +D   H + RQ +LD+A
Sbjct: 164 RLATRGLLPDLTLLFDCPPDVARARLR--------RPADGIESRDTGFHHRVRQGYLDLA 215

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           R +P R  ++D+      VA  +   +   +  R+
Sbjct: 216 RAEPRRIVVIDATRPALVVAEAVREALERTLGPRL 250


>gi|157956091|gb|ABW06433.1| thymidylate kinase [Wheat blue dwarf phytoplasma]
          Length = 207

 Score =  227 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 7/210 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EGAGKTTH   L   L +K Y   +T+EPGGT   E  R++LL     +   
Sbjct: 1   MFISFEGCEGAGKTTHSRYLFEKLSKK-YSCVLTKEPGGTLFNEVIRNILLHSSNKQIDF 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA R +H+  +I PAL + KI++CDR+LDS+ AYQG        F+ ++   +
Sbjct: 60  HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQGYARGLSQDFVLNINNFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MP+ T  LDL   IG++RV+          ++ F+ + +  H+K R+ +LD+ +  
Sbjct: 120 IN-YMPNITFYLDLDPKIGIQRVKQ----FRPKEINSFDLQKLSFHKKVRKGYLDLLQKD 174

Query: 185 PD-RCHIVDSAHSFQSVATNILNIVWELVQ 213
              R  ++D++   + +   I   + E+ Q
Sbjct: 175 QQKRIFLIDASKRLEVIYNIIEQKLKEVFQ 204


>gi|127512508|ref|YP_001093705.1| dTMP kinase [Shewanella loihica PV-4]
 gi|166223116|sp|A3QD98|KTHY_SHELP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|126637803|gb|ABO23446.1| thymidylate kinase [Shewanella loihica PV-4]
          Length = 210

 Score =  227 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 10/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           NS  FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   
Sbjct: 4   NSAKFIVIEGLEGAGKSSAIALVRDFIEKHNGVPPVCTREPGGTPLAERIRDLVKIADPN 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    E+E ++  AAR   V NVI+PAL +G  +L DR   SS AYQG         +++
Sbjct: 64  DPLCDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRQLMP-LVEA 122

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + ++++  PD T+ LD+   +GL+R ++R        LD  E++ +   E+ R  +L 
Sbjct: 123 VSQATLKDFKPDLTLYLDIDPQLGLQRARDR------GALDRIEQQALSFFERARATYLQ 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +A    +   ++D++ +   V   IL ++  
Sbjct: 177 LAARD-ESIVVIDASQTMAQVHKEILAVLQR 206


>gi|54308393|ref|YP_129413.1| thymidylate kinase [Photobacterium profundum SS9]
 gi|59798292|sp|Q6LSW5|KTHY_PHOPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46912821|emb|CAG19611.1| putative thymidylate kinase [Photobacterium profundum SS9]
          Length = 209

 Score =  227 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 9/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE-F 62
            FI  EG+EGAGK+T I  +   L     +    TREPGGTP AE  R ++     DE  
Sbjct: 4   KFIVIEGLEGAGKSTAIQQVIDALAAHGIENPESTREPGGTPLAEQMRALIKEGHPDEPL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR+  V+N+I+PAL EG+ ++ DR   SS AYQG         +++L++
Sbjct: 64  TDMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD TI +D+   +GL+R + R        LD  E+ +V    + R  FL+++ 
Sbjct: 124 TVLGDFCPDLTIYMDIDPILGLERARGR------GELDRIEKMNVDFFHRARARFLELSE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           N P +  I+D+  S ++V +++   +   ++K+
Sbjct: 178 NNP-KVIIIDAGQSLENVTSDLKQALNHWLEKQ 209


>gi|323491965|ref|ZP_08097134.1| thymidylate kinase [Vibrio brasiliensis LMG 20546]
 gi|323313823|gb|EGA66918.1| thymidylate kinase [Vibrio brasiliensis LMG 20546]
          Length = 209

 Score =  227 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M +  FI  EG+EGAGK+T I+ +   L++   + +  TREPGGT  AE  R ++     
Sbjct: 1   MKNAKFIVIEGLEGAGKSTAINAVLETLKQAGVERIQHTREPGGTALAEKLRTLVKQEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL +G+ ++ DR   SS AYQG         + 
Sbjct: 61  GEELQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIPRETML 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD TI LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 ALKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +IA    D   ++++      VA +I   +   V 
Sbjct: 175 EIANQD-DSVIVINAEQEIPQVAADISAALSAWVN 208


>gi|317050750|ref|YP_004111866.1| thymidylate kinase [Desulfurispirillum indicum S5]
 gi|316945834|gb|ADU65310.1| thymidylate kinase [Desulfurispirillum indicum S5]
          Length = 208

 Score =  227 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 110/210 (52%), Gaps = 8/210 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G FISFEG +GAGKTT +SLL R+L  ++   H TREPGGTP AEA R+++     +
Sbjct: 1   MN-GRFISFEGPDGAGKTTQLSLLSRYLDDRDILHHCTREPGGTPGAEAIRNLIFDSRHN 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE ++FAAAR  HVE  I P L +G  +LCDRF  S+  YQG         +  L
Sbjct: 60  LV-PRAELLLFAAARAQHVEERIMPLLEKGIWVLCDRFTLSTLVYQGYGRGLDRELIGQL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I+   + P   ++LD+  + G  RVQ R     S     F+      H +    F ++
Sbjct: 119 NAIATCGLAPHMQLVLDVEAEAGQNRVQQRLENNNS-----FDALSEDFHRRVVAGFREV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A +    C ++D + + + V  +I+  + E
Sbjct: 174 ASHDAH-CRLIDGSRNPEQVHGSIVAALHE 202


>gi|117621308|ref|YP_856780.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|254808271|sp|A0KKH9|KTHY_AERHH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|117562715|gb|ABK39663.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 213

 Score =  227 bits (580), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 8/218 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            FI  EG+EGAGK++ +  +  +L       +  TREPGGTP AE  R ++     +   
Sbjct: 3   KFIVIEGLEGAGKSSAVRYVADYLHGHGVARIECTREPGGTPLAERMRAIVKEVHDERLT 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++  A+R+  VE  I+PAL +G  ++ DR   SS AYQG         + +++  
Sbjct: 63  IEAELLLMYASRVQLVETRIKPALADGIWVVGDRHDLSSQAYQGGGRGIDANLIGAIKRA 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + +  PD T+ LD+   IGL+R ++R        LD  E + +   E+ RQ +L++A  
Sbjct: 123 VLGDFKPDLTLYLDIDPAIGLQRARHR------GELDRIELEQLSFFERTRQRYLELAAA 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
             +   ++D+  + + V   I   +   ++   S +  
Sbjct: 177 D-ESIKVIDAGQAPEQVKAAIEAALAHYLKDEPSCIPG 213


>gi|221134523|ref|ZP_03560828.1| thymidylate kinase [Glaciecola sp. HTCC2999]
          Length = 211

 Score =  227 bits (580), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 9/214 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   G FI  EG+EGAGK+T I  ++R L+   +++ +TREPGGTP AEA R  +     
Sbjct: 1   MTKLGQFIVVEGLEGAGKSTVIKAIQRELEAHGHELKLTREPGGTPMAEAIRDCVKHDWQ 60

Query: 60  DEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE    + E ++  AAR   +EN I+PAL  G  +L DR   SS AYQG         L+
Sbjct: 61  DEIVTEQTELLLMYAARSQLIENTIKPALANGIWVLGDRHDWSSLAYQGGGRQVNLAHLN 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +++E+++     + TI LD+   +GL R   R        LD  E+  +   E+ R+ +L
Sbjct: 121 AIRELTLDGFTANLTIYLDINPKVGLSRAAAR------GELDRIEQSGLAFFERARETYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++ +   D   ++D+  S   V  +++  V + +
Sbjct: 175 NLVK-NSDSAILIDAEQSIDKVREDVITAVRQFL 207


>gi|330829693|ref|YP_004392645.1| Thymidylate kinase [Aeromonas veronii B565]
 gi|328804829|gb|AEB50028.1| Thymidylate kinase [Aeromonas veronii B565]
          Length = 213

 Score =  227 bits (580), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            FI  EG+EGAGK++ +  +  +LQR   + +  TREPGGTP AE  R ++     +   
Sbjct: 3   KFIVIEGLEGAGKSSAVRYVTDYLQRHGINRIECTREPGGTPLAERMRAIVKEVHDERLT 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE ++  A+R+  VE  I+PAL +G  ++ DR   SS AYQG         + ++++ 
Sbjct: 63  IEAELLLMYASRVQLVETRIKPALADGVWVVGDRHDLSSQAYQGGGRGIDAQLIGAIKQA 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T+ LD+   +GL+R ++R        LD  E + +   E+ R  +L++A  
Sbjct: 123 VLGNFKPDLTLYLDIDPALGLQRARHR------GELDRIELEQLSFFERTRTRYLELAAK 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             D   ++D+A + + V   I   +   +
Sbjct: 177 D-DSIVVIDAAQTPEQVKAAIERALDHYL 204


>gi|291278502|ref|YP_003495337.1| dTMP kinase [Deferribacter desulfuricans SSM1]
 gi|290753204|dbj|BAI79581.1| dTMP kinase [Deferribacter desulfuricans SSM1]
          Length = 215

 Score =  227 bits (580), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 4/213 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +    F+  +GI+G GKTT   LLK +L     ++ +T+EPGGT      R++L+S   D
Sbjct: 4   IKKSFFLVIDGIDGCGKTTQCKLLKEYLNNIGLNILLTKEPGGTKTGTILRNILISTDYD 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++++A RL+H + +I P L  GK ++CDRF+ S+YAYQ      +  FL  L
Sbjct: 64  -IEPNTELLLYSADRLEHQKKIIIPGLNSGKTIICDRFISSTYAYQIFARGLEKSFLQYL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLD 179
           ++ +V +  PD TII+DLPV+I L+R   R   +     +  FE+  +  ++K R+ FL 
Sbjct: 123 EQHTVFK-WPDLTIIIDLPVEIALERALKRLKDQNCENSEGKFEKNGIDFYKKVREGFLW 181

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            ++N  +   +++      S+   I +IV E +
Sbjct: 182 YSKNYKN-VKVINGDRDIDSLFKEIKSIVNEKL 213


>gi|217976730|ref|YP_002360877.1| dTMP kinase [Methylocella silvestris BL2]
 gi|217502106|gb|ACK49515.1| dTMP kinase [Methylocella silvestris BL2]
          Length = 233

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 3/215 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I+ EG EG GK+T I  L + L+ +  +   TREPGG+  AE  R VLLS  V  
Sbjct: 13  RRGRLITLEGGEGVGKSTQIGRLLQRLRDEGIEAVATREPGGSEGAEILRRVLLSGVVKP 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AEAI+FAAAR+DH++ +I PAL  G  ++ DRF DS+ AYQG   S  +  +++L+
Sbjct: 73  LGPAAEAILFAAARIDHIDALIEPALAAGIWVVSDRFADSTRAYQGGAGSLDNRLINALE 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++ ++ PD T+ILDLP   GL   +     +++  +D FE +D+  HE  R  FL IA
Sbjct: 133 RTALGDLQPDLTLILDLPPGEGL--RRAAARRKDADGVDRFEGEDLRFHEAIRAAFLTIA 190

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE-LVQKR 215
            + P RC +VD++ S   VA  I   V + L+++R
Sbjct: 191 ADNPQRCVVVDASASEVEVAAAIWTAVSDRLLKER 225


>gi|330825750|ref|YP_004389053.1| Thymidylate kinase [Alicycliphilus denitrificans K601]
 gi|329311122|gb|AEB85537.1| Thymidylate kinase [Alicycliphilus denitrificans K601]
          Length = 218

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 17/208 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+FEGI+GAGK++HI  L R L+     V +TREPGGTP AE  R +LL+   D
Sbjct: 1   MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLN---D 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E ++  AAR DH+  VI PAL  G+ +LCDRF D+++AYQG         L  +
Sbjct: 58  AMDALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117

Query: 121 QEISVQE--------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + ++           + PD T+  D+P ++          L  +   D FE + V    +
Sbjct: 118 ERLAQTGIGLGPDSMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200
             + + D A   P R   +D A   + V
Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199


>gi|58038509|ref|YP_190473.1| thymidylate kinase [Gluconobacter oxydans 621H]
 gi|81557238|sp|Q5FUU6|KTHY_GLUOX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58000923|gb|AAW59817.1| Thymidylate kinase [Gluconobacter oxydans 621H]
          Length = 214

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 8/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+ EG EGAGK+T   LL   L+ + + V +TREPGGTP AE  R++LL   VD  
Sbjct: 4   KGLFITLEGGEGAGKSTQARLLAEALRAEGHKVLLTREPGGTPGAEEIRNLLLFGKVD-L 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR DH++N I PAL  G+I++CDRF DS+ AYQG         + +   
Sbjct: 63  SWRAEILMHMAARSDHLDNAILPALERGEIVVCDRFHDSTLAYQGYGIGQGAPEVLAFLN 122

Query: 123 ISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + +  +  PD T++L+LP    L R++ R         D +E +    HE+    F  I
Sbjct: 123 GARKLVDFEPDLTLMLELPRPQALARLKAR-----GGQTDRYEAQAEAFHERVLAGFDAI 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A   P R   VD+  + ++V+  +L  V E +
Sbjct: 178 ASADPVRVKRVDAGQTPEAVSAALLQAVHESL 209


>gi|270156732|ref|ZP_06185389.1| thymidylate kinase [Legionella longbeachae D-4968]
 gi|289164821|ref|YP_003454959.1| thymidylate kinase [Legionella longbeachae NSW150]
 gi|269988757|gb|EEZ95011.1| thymidylate kinase [Legionella longbeachae D-4968]
 gi|288857994|emb|CBJ11854.1| putative thymidylate kinase [Legionella longbeachae NSW150]
          Length = 212

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 8/213 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62
           G  I  EG+EGAGK+T ++ +   L  +      TREPGGT   E  R+++ +    D  
Sbjct: 6   GKLIVIEGLEGAGKSTAVNTVVDLLAERQIKTITTREPGGTAIGEILRNLIKNPEYRDVL 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++   AR+  ++ VI PAL +G  ++ DRF  S+ AYQG         +  L  
Sbjct: 66  DDRSELLLLYTARIQLLKQVIEPALQKGMWVIADRFELSTMAYQGGGRGLDQEMIRHLSS 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            S+Q + PD T+ LD+  + G++RV++R        LD  E++ +    +    +L   +
Sbjct: 126 FSLQGLKPDLTLYLDISPEEGMRRVKSR------GTLDRIEQQSIEFFHRVHDSYLQYIK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             P     +++A   ++V   +   + E ++ +
Sbjct: 180 MNP-YVVRINAALPLKNVQLALQKAINEFIEHQ 211


>gi|293396570|ref|ZP_06640846.1| dTMP kinase [Serratia odorifera DSM 4582]
 gi|291420834|gb|EFE94087.1| dTMP kinase [Serratia odorifera DSM 4582]
          Length = 212

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  F+  EG+EGAGKTT    +   L++    D+  TREPGGTP AE  R +      
Sbjct: 1   MNS-KFVVIEGLEGAGKTTARDTVVDVLRQHGINDIVFTREPGGTPLAEKLRDLFKRGYQ 59

Query: 60  DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E    +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQRLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + +  PD T+ LDLP  +GL+R Q R        LD  E++ +   E+ R  + 
Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPLVGLQRAQAR------GALDRIEQEALPFFERTRARYQ 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +A         +D+A   + V  +I   V   +Q++
Sbjct: 174 QLAAAD-ATIITIDAAQPLEQVTGDIGRCVAAWLQQQ 209


>gi|283458750|ref|YP_003363389.1| thymidylate kinase [Rothia mucilaginosa DY-18]
 gi|283134804|dbj|BAI65569.1| thymidylate kinase [Rothia mucilaginosa DY-18]
          Length = 239

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/224 (33%), Positives = 111/224 (49%), Gaps = 7/224 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI  EG +GAGKTT ++LL   L  + Y V  TREPGGT   E  R ++L  G   
Sbjct: 21  RRGLFIVVEGGDGAGKTTQLALLNEALSARGYRVITTREPGGTEIGEKLRALVLEAGQGT 80

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAA+R  H   +IRPAL EG I+L DR++DSS AYQG         +  L 
Sbjct: 81  IDDRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGIETIVDLS 140

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +  +++PD T++L +P+    +R+  R        +D  E +      +    F  IA
Sbjct: 141 RWATADLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGAAFKARIHGAFEQIA 194

Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           R   +    I+D   +   V   +L ++  L+  R    + ++D
Sbjct: 195 REDANGSHRIIDGVGTIDEVHARVLEVIEPLLAARELVRTGQED 238


>gi|39938716|ref|NP_950482.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|59798379|sp|Q7WSH2|KTHY_ONYPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33563105|dbj|BAC81721.1| thymidylate kinase [Onion yellows phytoplasma]
 gi|39721825|dbj|BAD04315.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 207

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 7/210 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKTTH   L   L +K Y   +T+EPGG    E  R++LL     +   
Sbjct: 1   MFISFEGCEGTGKTTHSRYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSSNKQIDF 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA R +H+  +I PAL + KI++CDR+LDS+ AYQ         F+ ++   +
Sbjct: 60  HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSQDFVLNINNFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + P+ T  LDL   IG++RV+          ++ F+ + +  H+K R+ +LD+ +  
Sbjct: 120 LNYI-PNITFYLDLDPKIGIQRVKQ----FRPKEINSFDLQKLSFHKKVRKGYLDLCQKD 174

Query: 185 PD-RCHIVDSAHSFQSVATNILNIVWELVQ 213
              R  ++D++   +++   I   + E+ Q
Sbjct: 175 QQKRIFLIDASKPLENIYNIIEQKLKEVFQ 204


>gi|157961746|ref|YP_001501780.1| thymidylate kinase [Shewanella pealeana ATCC 700345]
 gi|157846746|gb|ABV87245.1| dTMP kinase [Shewanella pealeana ATCC 700345]
          Length = 214

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   D  
Sbjct: 12  KFIVIEGLEGAGKSSAIALVRDFIEKHTGKAPICTREPGGTPLAEQMRDLVKIANESDPL 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++F AAR   V NVI+PAL  G+ +L DR   SS AYQG         + ++ +
Sbjct: 72  CDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRKLMP-LVSAISD 130

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +++   PD T+ LD+   +GL+R   R        LD  E++++   ++ R  FL  A 
Sbjct: 131 ATLKGFKPDLTLYLDIDPKLGLERAARR------GELDRIEQQEIEFFKRTRATFLSFAD 184

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
              +   IVD++ S   V  +I+ ++ E
Sbjct: 185 AD-ESIKIVDASQSMAEVHKDIIALLQE 211


>gi|212635620|ref|YP_002312145.1| thymidylate kinase [Shewanella piezotolerans WP3]
 gi|212557104|gb|ACJ29558.1| Thymidylate kinase [Shewanella piezotolerans WP3]
          Length = 214

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 10/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59
               F+  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   
Sbjct: 9   RKAKFVVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKVANES 68

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++F AAR   V NVI+P+L EGK +L DR   SS AYQG         + S
Sbjct: 69  DPLCDEAECLIFYAARAQLVANVIKPSLAEGKWVLGDRHNLSSLAYQGGGRGLMP-LVSS 127

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E +++   PD T+ LD+   +GL R  NR        LD  E++++    + R  FL 
Sbjct: 128 ISEATLKGFKPDLTLYLDIDPKLGLARAANR------GALDRIEQQELAFFNRTRATFLS 181

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            A N  D   I+D++ S  +V  +I+ ++ +
Sbjct: 182 YADND-DSIMIIDASQSMAAVHKDIIAVLQD 211


>gi|150020819|ref|YP_001306173.1| dTMP kinase [Thermosipho melanesiensis BI429]
 gi|166223124|sp|A6LLI7|KTHY_THEM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|149793340|gb|ABR30788.1| dTMP kinase [Thermosipho melanesiensis BI429]
          Length = 199

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 11/208 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEGI+G+GK+T + LL+++L  +   V   REPGGT   E  R +LL+        
Sbjct: 1   MFIAFEGIDGSGKSTQLVLLEKYLINRGKKVIKVREPGGTILGEKIRDLLLNFN---MNK 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE VIRP++ +G  +L DRF DSS AYQG   +     ++ L   +
Sbjct: 58  RSELLLFLASRAQLVEEVIRPSIEKGYFVLADRFSDSSIAYQGGARNLGKDLVEKLNIFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD    +D+PV + ++R++ +         D  E++     EK R  +L IA+++
Sbjct: 118 TNGIFPDIVFFIDIPVQMAVRRMKEKEK-------DRIEKEGEDFLEKVRTTYLHIAKSR 170

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
            +   ++D       V + I  I+  ++
Sbjct: 171 KN-FFVIDGTKDVDYVFSQIKRIIDTML 197


>gi|332178700|gb|AEE14389.1| Thymidylate kinase [Thermodesulfobium narugense DSM 14796]
          Length = 214

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 10/214 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI+FEGIE  GKTT   LL   L      V   ++PG T   E  R+ LL      
Sbjct: 5   KKGLFITFEGIEKCGKTTQSKLLYDKLLSLGEKVVYLKDPGVTEVGENFRNALLYGKN-- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E ++F A R   V   I PAL + KI++CDRF DS++AYQG   +    FL SL 
Sbjct: 63  ISVETEVLLFLACRAQLVNEHIFPALKDDKIVICDRFSDSTFAYQGYGRNVNLSFLKSLD 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + + + + PD T + D       +R             D  E + +  H + R  +LD+A
Sbjct: 123 KFATKGIKPDITFLFDFSFFEAKQRF--------LDSKDRMETESIEFHNRVRAGYLDLA 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +PDR  I+ S  + + +   +L  V E   +R
Sbjct: 175 SMEPDRFCILYSKLNIEKLHEIVLKKVLERKNER 208


>gi|103486743|ref|YP_616304.1| thymidylate kinase [Sphingopyxis alaskensis RB2256]
 gi|98976820|gb|ABF52971.1| thymidylate kinase [Sphingopyxis alaskensis RB2256]
          Length = 207

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/212 (34%), Positives = 107/212 (50%), Gaps = 6/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+ EG EG GK+T +  L   L  ++ +V  TREPGG+  AEA R +L+    D
Sbjct: 1   MIRGRFITLEGGEGVGKSTQLRALSEALAARSIEVVATREPGGSVGAEAIRTLLMEGSDD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + A +EA++FAAAR DHV   IRPAL  G  +LCDRF+DSS AYQG         + +L
Sbjct: 61  RWDARSEALLFAAARADHVARTIRPALARGAWVLCDRFVDSSRAYQGGGGGITDADILAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                + ++PD T +L +  D   +R+  R         D    K      +    F ++
Sbjct: 121 HRFGSRGLLPDRTFLLTVRPDEAARRLAARGDR------DRMGSKPADYQARLAARFAEM 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  +P R  ++D+      V   +L  + E +
Sbjct: 175 AATEPQRWRLIDADLPAADVTAAMLAELIEWL 206


>gi|291617041|ref|YP_003519783.1| Tmk [Pantoea ananatis LMG 20103]
 gi|291152071|gb|ADD76655.1| Tmk [Pantoea ananatis LMG 20103]
          Length = 211

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 9/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEF 62
            FI  EG+EGAGKTT    +   L+    D +  TREPGGTP AE  R ++      ++ 
Sbjct: 4   KFIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLRVLVKQGIEGEQI 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + +L++
Sbjct: 64  TDKAELLMLYAARVQLVETVIKPALARGPGVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+  + GL+R + R        LD  E++ +   E+ R+ +L +A 
Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              D    +D+    + V + +   +   + ++
Sbjct: 178 AD-DSILTIDATQPLEQVTSALHATLTAWLAEQ 209


>gi|254507623|ref|ZP_05119756.1| thymidylate kinase [Vibrio parahaemolyticus 16]
 gi|219549510|gb|EED26502.1| thymidylate kinase [Vibrio parahaemolyticus 16]
          Length = 210

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 9/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M+   FI  EG+EGAGK+T I+ +   L++   + +  TREPGGT  AE  R ++     
Sbjct: 1   MSQAKFIVIEGLEGAGKSTAINAVMETLKQAGVERIKNTREPGGTVLAEKLRTLVKQEHD 60

Query: 60  DEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E      E ++  AAR+  VENVI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 61  GEILQDMTELLLMYAARVQLVENVIKPALESGTWVVGDRHDMSSQAYQGGGRQIAKETMA 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++ +  PD TI LDL   +GL+R + R        LD  E+ D+   ++ R+ +L
Sbjct: 121 SLKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++A    +   +V++  +   VA +I   +   +
Sbjct: 175 EMANAD-ESVMVVNAEQTIDKVAADIKIALRSWM 207


>gi|15606283|ref|NP_213662.1| thymidylate kinase [Aquifex aeolicus VF5]
 gi|6016457|sp|O67099|KTHY_AQUAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|158429380|pdb|2PBR|A Chain A, Crystal Structure Of Thymidylate Kinase (Aq_969) From
           Aquifex Aeolicus Vf5
 gi|158429381|pdb|2PBR|B Chain B, Crystal Structure Of Thymidylate Kinase (Aq_969) From
           Aquifex Aeolicus Vf5
 gi|2983484|gb|AAC07063.1| thymidylate kinase [Aquifex aeolicus VF5]
          Length = 195

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 15/209 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GKTT    L  +L++K Y V + REPGGT   E  R +LL    +E   
Sbjct: 1   MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILL---TEELDE 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A+R   +E  I P L   K+++ DRF+ S+ AYQG        F+ +L E +
Sbjct: 58  RTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + V PD T++LD+PVDI L+R++ +         + FE K     EK R+ FL++A+ +
Sbjct: 118 TRGVKPDITLLLDIPVDIALRRLKEK---------NRFENK--EFLEKVRKGFLELAKEE 166

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +   ++D++   + V   IL  +  +++
Sbjct: 167 -ENVVVIDASGEEEEVFKEILRALSGVLR 194


>gi|330994629|ref|ZP_08318552.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1]
 gi|329758270|gb|EGG74791.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1]
          Length = 213

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/215 (40%), Positives = 118/215 (54%), Gaps = 7/215 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+FEG EGAGK+T   LL   L+   +DV +TREPGGT AAEA R  LL  G D  
Sbjct: 2   RGLFITFEGGEGAGKSTQARLLADHLRAHGHDVDLTREPGGTEAAEALRDFLLFGGHD-L 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQ 121
            A AE +   AAR DHV+  I PAL +G+I++CDRF DS+ AYQG     +    LD + 
Sbjct: 61  SARAEVLTHFAARADHVDRRILPALAQGRIVVCDRFADSTEAYQGYGVSHADTGLLDMIG 120

Query: 122 EI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ ++  V PD T +L +P D+   R++ R   R     D +E +D   H +    F  I
Sbjct: 121 QLRAMLPVQPDLTFVLQVPPDVARDRLRQRADGR----ADRYEAEDAAFHARVAAGFDAI 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           AR    RCH +D++     V   I  ++   +  R
Sbjct: 177 ARRDAARCHRIDASGDAGGVQQAIRAVLAPRLAGR 211


>gi|294671092|ref|ZP_06735947.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307200|gb|EFE48443.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 207

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 7/204 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ +GI+G+GK+TH+  ++ + +R+   V  TREPGGTP  E  R +LLS      G  
Sbjct: 5   FLTLDGIDGSGKSTHLETMREWFERRGMPVLFTREPGGTPLGEELRRLLLSPD-SRVGLR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR  H+E+VI PAL +G  ++ DRF D+++AYQG         ++ L+    
Sbjct: 64  TETLLMFAARRQHLEDVILPALDKGIHVVSDRFTDATFAYQGGGRGIPAADIEVLENWVQ 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P+ T++LD+P+++  +R+        S   D FE+++     + R+ +LD A   P
Sbjct: 124 GSLRPNLTLLLDVPLEVSFERIA------RSREKDRFEQEEAEFFARVRRAYLDRAAAHP 177

Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209
            R  ++DS  S + V   +   + 
Sbjct: 178 QRYRVIDSNRSREEVRAAVEAALQ 201


>gi|319762329|ref|YP_004126266.1| thymidylate kinase [Alicycliphilus denitrificans BC]
 gi|317116890|gb|ADU99378.1| thymidylate kinase [Alicycliphilus denitrificans BC]
          Length = 218

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 17/208 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GLFI+FEGI+GAGK++HI  L R L+     V +TREPGGTP AE  R +LL+   D
Sbjct: 1   MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLN---D 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E ++  AAR DH+  VI PAL  G+ +LCDRF D+++AYQG         L  +
Sbjct: 58  AMDALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117

Query: 121 QEISVQE--------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + ++           + PD T+  D+P ++          L  +   D FE + V    +
Sbjct: 118 ERLAQTGIGLGPDLMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200
             + + D A   P R   +D A   + V
Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199


>gi|330431479|gb|AEC16538.1| thymidylate kinase [Gallibacterium anatis UMN179]
          Length = 210

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 9/213 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE-F 62
            FI  EG+EGAGKT+    +   L+     +   TREPGGTP AE  R ++     DE  
Sbjct: 4   KFIVLEGLEGAGKTSARDTVVAVLKELGINEFVFTREPGGTPLAEKLRQLIKQGEGDEVI 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE ++  AAR+  VENVI+PAL +GK ++ DR   SS AYQG         L +L++
Sbjct: 64  TDKAELLMLYAARVQLVENVIKPALKQGKWVIGDRHDLSSQAYQGGGRGLDINLLMTLKQ 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + +  PD T+ LD+  +IGL R ++R        LD  E++ +   ++ RQ +L +  
Sbjct: 124 AVLGDFTPDLTLYLDVDPEIGLARARSR------GELDRIEQQQIDFFQRTRQRYLQLVE 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              ++   +D+   F  V   +   + +  Q++
Sbjct: 178 AD-EKSVTIDANLDFPEVNKQLRQAITQWFQRQ 209


>gi|157370153|ref|YP_001478142.1| thymidylate kinase [Serratia proteamaculans 568]
 gi|166987708|sp|A8GD24|KTHY_SERP5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157321917|gb|ABV41014.1| dTMP kinase [Serratia proteamaculans 568]
          Length = 212

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 10/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M S  F+  EG+EGAGKTT    +   L+     D+  TREPGGTP AE  R +      
Sbjct: 1   MKS-KFVVIEGLEGAGKTTARDTVVDVLREHGINDIAFTREPGGTPLAEKLRDLFKRGVE 59

Query: 60  DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E    +AE ++  AAR+  VE VI+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 60  GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMA 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++  + E  PD T+ LDLP  +GL+R + R        LD  E++ +   E+ R  + 
Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPIVGLQRARAR------GELDRIEQEALPFFERTRARYR 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A         VD++ S   V   I   V + +Q++
Sbjct: 174 ELAAQDAS-IITVDASQSLDQVTAAIRRCVSQWLQQQ 209


>gi|308234128|ref|ZP_07664865.1| thymidylate kinase [Atopobium vaginae DSM 15829]
 gi|328943647|ref|ZP_08241112.1| thymidylate kinase [Atopobium vaginae DSM 15829]
 gi|327491616|gb|EGF23390.1| thymidylate kinase [Atopobium vaginae DSM 15829]
          Length = 211

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 8/211 (3%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ SGLFI+ EG++G GK+T + LL+   +  +Y V   REPGGT  +EA R ++L    
Sbjct: 1   MSASGLFITLEGVDGCGKSTQVQLLRSCFEEASYKVSCLREPGGTSISEAIRALVLDPAY 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +E E +++ AAR   V  VI+PAL +G+I+LCDR+ DS+YAYQ          +  
Sbjct: 61  TSMSSECELLLYEAARAQLVHEVIKPALAQGRIVLCDRYFDSTYAYQYGGRKLAEDMVLR 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             ++    ++P  T +LD+ V     R            +D  E++ +   +  ++ +  
Sbjct: 121 ANDLGSCGIVPHKTYVLDVDVACAYARATQ-------TSVDRLEQEGLAFQQDVQKAYKK 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +A  QP R  ++    + Q V + +   + +
Sbjct: 174 LACLQPQRVTLISGEGTPQEVFSRLYADIRK 204


>gi|126695487|ref|YP_001090373.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9301]
 gi|166223098|sp|A3PAJ7|KTHY_PROM0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|126542530|gb|ABO16772.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9301]
          Length = 212

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
            G FI  EGI+G GKTT I  L ++L           +  TREPGG+   +  R ++L  
Sbjct: 2   KGKFIVIEGIDGCGKTTQIDELSKWLPISGLLKKESKLITTREPGGSLLGKKLRRLILDN 61

Query: 58  G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++  + AE ++++A R +HV  +I PAL     ++ DRF DS+ AYQG   +     
Sbjct: 62  NENNKPSSLAELLLYSADRAEHVSKIILPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + +++ I  Q   PD T  L++  +  + R       R++   D  E + +   E+  + 
Sbjct: 122 IKNIESIVCQGASPDLTFFLEISPEESIFR-------RKNEIPDRIESEGIRFLERVNEG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           F  IA+       ++ ++ + ++++  I   +
Sbjct: 175 FKLIAKQ--KNWKVISASQNIKTISNQIKETL 204


>gi|149197612|ref|ZP_01874662.1| thymidylate kinase [Lentisphaera araneosa HTCC2155]
 gi|149139182|gb|EDM27585.1| thymidylate kinase [Lentisphaera araneosa HTCC2155]
          Length = 209

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 8/215 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+   FI  EG EGAGK+T I L+K  L+ +   V + REPGGTP AE  R V+ S  VD
Sbjct: 1   MDCSRFIVVEGSEGAGKSTAIKLIKNLLEEQGQTVTLAREPGGTPMAEDLRTVIKSASVD 60

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   A  E ++  AAR+  VENVIRPAL  G+ L+CDRF  S++AYQG         +  
Sbjct: 61  EKVDARTELLIMYAARVQLVENVIRPALERGEWLVCDRFFYSTWAYQGGGRELGLDLIRP 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + +I + ++ P  TI +DL  ++GL+R + R        LD FE + +    + R ++  
Sbjct: 121 IHDICLADMTPGLTIFMDLDPELGLERARGR------GALDRFELEQIDFFHRTRAMYTQ 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   + +    +D++ S + V  ++LN++   +++
Sbjct: 175 LCDERKE-MQKLDASQSLEEVHAHLLNLIRPYIEQ 208


>gi|254462931|ref|ZP_05076347.1| thymidylate kinase [Rhodobacterales bacterium HTCC2083]
 gi|206679520|gb|EDZ44007.1| thymidylate kinase [Rhodobacteraceae bacterium HTCC2083]
          Length = 209

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 6/190 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FISFEGI+G+GK+T    L   L+   ++V +TREPGG+  AE  R ++L    D +
Sbjct: 5   TGRFISFEGIDGSGKSTQAKRLAAALEADGFEVVLTREPGGSAGAEEIRALVLQGEPDRW 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE E ++F AAR DH+E  I PAL  GK+++CDRF DS+  YQG         +D L  
Sbjct: 65  SAETEILLFTAARRDHMERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRALVDQLHA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +    PD T++ D+  D+   R   R S+        FE     + +  R  FL++A 
Sbjct: 125 LMIGR-EPDLTLLFDMDPDVSHARAVERDSIDS-----RFENFGASLQKAMRSGFLELAA 178

Query: 183 NQPDRCHIVD 192
             P R  IV+
Sbjct: 179 AAPKRFRIVN 188


>gi|187251864|ref|YP_001876346.1| thymidylate kinase [Elusimicrobium minutum Pei191]
 gi|186972024|gb|ACC99009.1| Thymidylate kinase [Elusimicrobium minutum Pei191]
          Length = 203

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI FEG +  GK+T  +LL+++L+   Y+V  TREPGGTP +E  R +LL         
Sbjct: 3   KFIVFEGPDRGGKSTQANLLRKYLEAAGYNVLQTREPGGTPVSEGIRKILLDPENS-VSP 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +++ A+R  H E  I PAL E KI++C+R+  S+ AYQG         ++++  I+
Sbjct: 62  RAELLLYEASRAQHTEEKILPALQEDKIVICERYTMSTCAYQGYGRGFDMDLINTVNNIA 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFLDIAR 182
              + PD T +           + ++Y       L  D  E +     EK RQ + ++ +
Sbjct: 122 THGLQPDLTFVF---------LMSDKYFTERGEYLFSDRLELEGNEFREKMRQGYKELVK 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             P+   ++D+ ++ + +   +L  + E 
Sbjct: 173 ITPN-AVLIDADNTVEEIHAKVLGHLKEF 200


>gi|325478730|gb|EGC81841.1| dTMP kinase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 209

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 6/213 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I FEG +G+GKT+ ++ +K+ L +   +    REPGGT  +E  R +++    ++ 
Sbjct: 2   RGKLIVFEGPDGSGKTSVLNEVKKILDQDGIEYLTFREPGGTDISEKIRDIIIDNDNEKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  E ++FAA+R   +E  IRP+L  GK +LCDRF+ SS  YQG   +     +  + +
Sbjct: 62  TARCECLLFAASRAQLIEEEIRPSLEAGKTVLCDRFVLSSLLYQGVGRNLGIEEVKKIND 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   +  D TI  D+     L R +  ++       D  E ++   H+K    +  +A 
Sbjct: 122 FATDNIRADLTIFFDIDYKTALIRKRKNFTA------DRLENENFDFHKKIFDAYKKMAD 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              D    +D++ S + V    + +++E ++ +
Sbjct: 176 EYEDEIKKIDASLSIEDVTKQAIQLIYESLEDK 208


>gi|167624300|ref|YP_001674594.1| thymidylate kinase [Shewanella halifaxensis HAW-EB4]
 gi|167354322|gb|ABZ76935.1| dTMP kinase [Shewanella halifaxensis HAW-EB4]
          Length = 212

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 10/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           NS  FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   
Sbjct: 7   NSAKFIVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKIANDS 66

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++F AAR   V NVI+PAL  G+ +L DR   SS AYQG         + +
Sbjct: 67  DPLCDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRGLMP-LVSA 125

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + + +++   PD T+ LD+   +GL+R   R        LD  E++++   ++ R  FL 
Sbjct: 126 ISDATLKGFKPDLTLYLDIAPKLGLERAARR------GELDRIEQQEIEFFDRARATFLS 179

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            A +  D   IVD++ S   V  +I+ I+ E
Sbjct: 180 FADSD-DTIKIVDASQSMAQVHKDIIAILQE 209


>gi|255327688|ref|ZP_05368754.1| dTMP kinase [Rothia mucilaginosa ATCC 25296]
 gi|255295362|gb|EET74713.1| dTMP kinase [Rothia mucilaginosa ATCC 25296]
          Length = 238

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 7/224 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI  EG +GAGKTT ++LL   L+ + Y V  TREPGGT   E  R ++L  G   
Sbjct: 20  RRGLFIVVEGGDGAGKTTQLALLDEALRGRGYRVITTREPGGTEIGEKLRALVLEAGQGT 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAA+R  H   +IRPAL EG I+L DR++DSS AYQG         +  L 
Sbjct: 80  IDDRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGVETIVDLS 139

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++PD T++L +P+    +R+  R        +D  E +      +    F  IA
Sbjct: 140 RWATANLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGTAFKARIHGAFEQIA 193

Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           R   +    I+D   + + V   +L ++  L+  R    + K+D
Sbjct: 194 REDANGSHRIIDGVGTIEQVHARVLEVIEPLLALRELVRTGKED 237


>gi|78778518|ref|YP_396630.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
 gi|123554778|sp|Q31D51|KTHY_PROM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78712017|gb|ABB49194.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312]
          Length = 212

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
            G FI  EGI+G GKTT I+ L ++L +     K   +  TREPGG+   +  R ++L  
Sbjct: 2   KGKFIVIEGIDGCGKTTQINELSKWLPKSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61

Query: 58  G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++  + AE ++++A R +H+  +I PAL     ++ DRF DS+ AYQG         
Sbjct: 62  NKTNKPSSLAELLLYSADRAEHISKIISPALNNNDWVISDRFSDSTLAYQGYGRKINLEI 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  ++ I  Q   PD T  L++  +  + R       R++   D  E + +   EK  + 
Sbjct: 122 IKKVESIVCQGEYPDLTFFLEISPEESIMR-------RKNEIPDRIESEGIRFLEKVNEG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           F  IAR    +  ++ ++ + ++++  I   +
Sbjct: 175 FKLIARE--KKWKVISASQNIKTISNQIKETL 204


>gi|303325943|ref|ZP_07356386.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3]
 gi|302863859|gb|EFL86790.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3]
          Length = 217

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 21/222 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEGIEG+GK+T   LL   LQ   YD  +TREPGG     + R +LL        +
Sbjct: 1   MFISFEGIEGSGKSTAQRLLAEHLQGLGYDPLLTREPGGCALGRSLRPILLDARTRGLSS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R  HV  VIRPAL  G+ +LCDR+ DS+ AYQG         L  + +++
Sbjct: 61  RAELYLFLADRAQHVAEVIRPALEAGQTVLCDRYADSTLAYQGYGRGLDPEHLRRINDMA 120

Query: 125 VQE----------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173
                        +           V  GL+R   R     +   +  F+ + +  HE+ 
Sbjct: 121 TGGLMPDLTLLLDLP----------VHCGLERAGLRNREEGTVLSEGRFDAESLEFHERV 170

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           RQ +  +A  +P+R  I+D+A   + V    L+ V   +++R
Sbjct: 171 RQGYRSLAAEEPERFAIIDAAQPPEDVVLQCLSAVEASLRQR 212


>gi|117920213|ref|YP_869405.1| thymidylate kinase [Shewanella sp. ANA-3]
 gi|166223117|sp|A0KW30|KTHY_SHESA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|117612545|gb|ABK47999.1| thymidylate kinase [Shewanella sp. ANA-3]
          Length = 209

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 10/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   D  
Sbjct: 7   KFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSDPL 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E+E ++  AAR   V NVI+PAL EGK +L DR   SS AYQG         ++++  
Sbjct: 67  CDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +++   PD T+ LDL   +GL R   R        LD  E++ +   E+ R  +L +A 
Sbjct: 126 ATLKGFKPDLTLYLDLDPKLGLLRAAKR------GELDRIEQQAIDFFERARATYLKLAS 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
              +R  ++D++ +   V  +IL ++ 
Sbjct: 180 ED-ERIVVIDASQTMAEVHKDILAVLQ 205


>gi|126174672|ref|YP_001050821.1| thymidylate kinase [Shewanella baltica OS155]
 gi|125997877|gb|ABN61952.1| thymidylate kinase [Shewanella baltica OS155]
          Length = 208

 Score =  225 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   D  
Sbjct: 6   KFIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPL 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++  AAR   V NVI+PAL +G+ +L DR   SS AYQG         ++++  
Sbjct: 66  CDEAECLLIYAARAQLVANVIKPALAKGQWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +++   PD T+ LDL   +GL R   R        LD  E++ +   E+ R  +L +A 
Sbjct: 125 ATLKGFKPDLTLYLDLDPKLGLTRAAKR------GELDRIEQQAIDFFERARATYLKLAS 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
              D   ++D++ +   V  +IL ++ 
Sbjct: 179 ED-DSIVVIDASQTMAEVHKDILAVLQ 204


>gi|24374155|ref|NP_718198.1| thymidylate kinase [Shewanella oneidensis MR-1]
 gi|46576581|sp|Q8EDX8|KTHY_SHEON RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|24348659|gb|AAN55642.1|AE015703_4 thymidylate kinase [Shewanella oneidensis MR-1]
          Length = 209

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 10/209 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ I+L++ F+++   +    TREPGGTP AE  R ++  +   D  
Sbjct: 7   KFIVVEGLEGAGKSSAIALIRDFIEKHTGHAPVCTREPGGTPLAERIRDLVKIADPSDPL 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E+E ++  AAR   V NVI+PAL +G  +L DR   SS AYQG         ++++  
Sbjct: 67  CDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +++   PD T+ LDL   +GL+R   R        LD  E++ +   E+ R  +L +A 
Sbjct: 126 ATLKGFKPDLTLYLDLDPKLGLQRAAKR------GELDRIEQQAIDFFERARATYLKLAS 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +   ++D++ +   V  +IL ++  +
Sbjct: 180 ED-ECIVVIDASQTMAEVHKDILAVLQAM 207


>gi|27904814|ref|NP_777940.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|27904212|gb|AAO27045.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 217

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLL-SCG 58
           M  G FI  EGIEG+GKTT    LK  L       V   R+PG TP AE  R +L+    
Sbjct: 6   MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 65

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E E ++F AAR+  ++N+I+PAL +G  ++ DR+  SS AYQ      +   + 
Sbjct: 66  NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 125

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            LQ + ++   P+ T  LD+  +IGL R++NR        +D  E+         R  +L
Sbjct: 126 LLQSLFLKNFNPNITFYLDVTPEIGLNRIKNR------NEIDRIEQNTKFFFNNVRNKYL 179

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           ++ + +P     +++      V  +    +   + 
Sbjct: 180 NLIKTKPG-IIKINANRKIDKVKHSCKQQMLSWLN 213


>gi|328955029|ref|YP_004372362.1| thymidylate kinase [Coriobacterium glomerans PW2]
 gi|328455353|gb|AEB06547.1| thymidylate kinase [Coriobacterium glomerans PW2]
          Length = 242

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 10/207 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EGI+G GK+T   LL   L+   Y+V + REPGG   +E  R +LL     E  A 
Sbjct: 26  FITLEGIDGCGKSTQARLLAATLEHAGYEVELLREPGGAAISEKIRQLLLDPANAEMSAT 85

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E +++ AAR   V  +I PAL  G++++CDRF DS+ +YQ          +D+   ++V
Sbjct: 86  CELMLYEAARAQLVHQLIVPALQTGRVVVCDRFYDSTTSYQSFGSGIDRATVDTANGLAV 145

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P  TI+ D+  D+  +R+  R         D  E K     ++  + F  IA  +P
Sbjct: 146 GAIRPLITIVCDIAPDLAAERMPGRAR-------DRMEAKGAAFQQRAAEGFRAIAAEEP 198

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212
           +R  ++D++   + VA  +L  V EL+
Sbjct: 199 ERVRLIDAS---EDVAHVLLRSVAELI 222


>gi|184201527|ref|YP_001855734.1| thymidylate kinase [Kocuria rhizophila DC2201]
 gi|183581757|dbj|BAG30228.1| thymidylate kinase [Kocuria rhizophila DC2201]
          Length = 218

 Score =  224 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 5/199 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG +GAGK+T +S L + L+   + V  TREPGGTP AE+ R ++L      
Sbjct: 5   TRGALIVFEGGDGAGKSTQVSALVQALRAGGHTVTCTREPGGTPLAESVRALVLDPAHAP 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FA+AR DHV  +IRPA+  G+I++CDRF+DSS AYQG         +  L 
Sbjct: 65  VAPATEALLFASARADHVARLIRPAVERGEIVVCDRFVDSSVAYQGAGRGLGLARVADLN 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + ++Q ++PD T++LD+               R  +  D  E +D+  H      F ++A
Sbjct: 125 QWALQGLVPDLTVLLDVDQT-----TAQARRRRRGSASDRMEAEDLAFHATVNAAFRELA 179

Query: 182 RNQPDRCHIVDSAHSFQSV 200
              P R  ++D+A S + +
Sbjct: 180 AAAPQRYLVLDAAESAERI 198


>gi|29611727|sp|P59500|KTHY_BUCBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 212

 Score =  224 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLL-SCG 58
           M  G FI  EGIEG+GKTT    LK  L       V   R+PG TP AE  R +L+    
Sbjct: 1   MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +    E E ++F AAR+  ++N+I+PAL +G  ++ DR+  SS AYQ      +   + 
Sbjct: 61  NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            LQ + ++   P+ T  LD+  +IGL R++NR        +D  E+         R  +L
Sbjct: 121 LLQSLFLKNFNPNITFYLDVTPEIGLNRIKNR------NEIDRIEQNTKFFFNNVRNKYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           ++ + +P     +++      V  +    +   + 
Sbjct: 175 NLIKTKPG-IIKINANRKIDKVKHSCKQQMLSWLN 208


>gi|85057772|ref|YP_456688.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|123518128|sp|Q2NIY4|KTHY_AYWBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|84789877|gb|ABC65609.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 207

 Score =  224 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 7/210 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKTTH S L   L +K Y   +T+EPGG    E  R++LL     +   
Sbjct: 1   MFISFEGCEGTGKTTHSSYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSYNKQIDF 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++FAA R +H+  +I PAL + KI++CDR+LDS+ AYQ         F+ ++  ++
Sbjct: 60  HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSKDFVLNINNLA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +   MP+ T  LDL   IG++RV+          ++ F+ + +  H+K R+ +LD+ +  
Sbjct: 120 LN-YMPNITFYLDLDPKIGIQRVKQ----FRPKEINSFDLQKLSFHKKVRKGYLDLYQKD 174

Query: 185 PD-RCHIVDSAHSFQSVATNILNIVWELVQ 213
              R  ++D++ S + +   I   + E+ Q
Sbjct: 175 QQKRIFLIDASKSLEKIYNIIEQKLKEVFQ 204


>gi|256827342|ref|YP_003151301.1| thymidylate kinase [Cryptobacterium curtum DSM 15641]
 gi|256583485|gb|ACU94619.1| thymidylate kinase [Cryptobacterium curtum DSM 15641]
          Length = 295

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 78/211 (36%), Positives = 110/211 (52%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+FEG +GAGK+THI  L R L++  Y V   REPGGT A EA R V+L    + 
Sbjct: 57  SRGAFITFEGGDGAGKSTHIKFLARALEQCGYSVVRLREPGGTQAGEALRQVVLDPSYEG 116

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AE+E +++ AAR   V+ VI PAL  GKI+LCDRF DS+ AYQ         F+    
Sbjct: 117 LSAESELLIYEAARAQLVKEVIAPALAAGKIVLCDRFCDSTIAYQAYGRGLSRDFVQEAN 176

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + Q + PD T+++  P      R Q   + R     D  E   V  H + R+ F  IA
Sbjct: 177 LFACQGIKPDRTVLIKAPTS---ARKQLERATRAQG-PDRIELAGVEFHTRVREAFDAIA 232

Query: 182 RNQPDRC-HIVDSAHSFQS---VATNILNIV 208
            + PDR   +V ++   ++   V   + + V
Sbjct: 233 ASDPDRVRVVVSASRKSETARLVFAAVADCV 263


>gi|89070236|ref|ZP_01157560.1| thymidylate kinase [Oceanicola granulosus HTCC2516]
 gi|89044156|gb|EAR50314.1| thymidylate kinase [Oceanicola granulosus HTCC2516]
          Length = 202

 Score =  224 bits (572), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 10/196 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEGI+G+GK+T   LL   L     D  +TREPGG+  AE  R ++L+    
Sbjct: 1   MAPGRFITFEGIDGSGKSTQARLLAERLP----DALLTREPGGSAGAEEIRALVLNGDPG 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            + AE E ++F AAR DH+E  I PAL  G+ ++CDRF DS+  YQG         +D L
Sbjct: 57  RWSAETELLLFTAARRDHLEKTIEPALAAGRTVICDRFADSTRVYQGATRGDLRATVDKL 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +++    PD T I+D+  +  L R   R           FE   + + E  R  FL +
Sbjct: 117 HALTI-GREPDLTFIIDMDPETALARGVARPGAER-----RFEDFGLALQETVRHGFLSL 170

Query: 181 ARNQPDRCHIVDSAHS 196
           AR   +RC ++D    
Sbjct: 171 ARQFSERCIVIDGDRP 186


>gi|148651943|ref|YP_001279036.1| dTMP kinase [Psychrobacter sp. PRwf-1]
 gi|226732663|sp|A5WBP5|KTHY_PSYWF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148571027|gb|ABQ93086.1| thymidylate kinase [Psychrobacter sp. PRwf-1]
          Length = 208

 Score =  224 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 10/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G F+SFEG EG GKTT I+ L   LQ +  +   TREPGG+P AE  R +LL     
Sbjct: 1   MSLGKFVSFEGTEGVGKTTAINGLCERLQAQGIEYVRTREPGGSPFAEQLRELLLDTRT- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119
           +   + E ++  AAR DH+  VI PAL  GK ++CDRF+DS+ AYQG          L  
Sbjct: 60  QINDDTELLLMFAARSDHLAQVIMPALSAGKWVICDRFIDSTVAYQGYGRGFGNADMLHK 119

Query: 120 LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++ +    V  +PD T+ LDLPV  G++R   R      +  D FE++ +   ++  Q F
Sbjct: 120 IEALIAGFVPRLPDITLWLDLPVAEGMQRAGKR------SVADRFEQQQLDFFDRVYQGF 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               + QP R   +D+    + VA  I   V + +
Sbjct: 174 EAQQQAQPQRIQRIDAQGEVEQVADRIWQSVSQQL 208


>gi|157363328|ref|YP_001470095.1| dTMP kinase [Thermotoga lettingae TMO]
 gi|157313932|gb|ABV33031.1| dTMP kinase [Thermotoga lettingae TMO]
          Length = 202

 Score =  224 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 11/207 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ISFEGI+G+GK T + L   +L+ KN      REPGGT   E  R ++L     +   
Sbjct: 1   MLISFEGIDGSGKGTQLRLFLSYLKNKNLPYIHVREPGGTELGEILREIVLKGQF-QIYP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A+R   V  +I PAL E K+++ DRF+DSS  YQG         ++ L + +
Sbjct: 60  KAELLLFLASRAQLVSQIILPALKENKVVVADRFIDSSVVYQGVGRELGPELVEKLNDFA 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T  +D+PV+  LKR +           D  E + +   +K R+ +L++AR +
Sbjct: 120 TDGLKPDLTFYIDVPVETALKRKR---------IFDRIESEGIEFLKKVRKAYLELARKE 170

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
             R  +++   + + + + I+ I  +L
Sbjct: 171 K-RIFLMNGEKAIEEIHSEIILIFEQL 196


>gi|113970001|ref|YP_733794.1| thymidylate kinase [Shewanella sp. MR-4]
 gi|114047236|ref|YP_737786.1| thymidylate kinase [Shewanella sp. MR-7]
 gi|123325106|sp|Q0HJN0|KTHY_SHESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123326608|sp|Q0HVX6|KTHY_SHESR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|113884685|gb|ABI38737.1| thymidylate kinase [Shewanella sp. MR-4]
 gi|113888678|gb|ABI42729.1| thymidylate kinase [Shewanella sp. MR-7]
          Length = 209

 Score =  224 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 10/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   D  
Sbjct: 7   KFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSDPL 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E+E ++  AAR   V NVI+PAL EGK +L DR   SS AYQG         ++++  
Sbjct: 67  CDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +++   PD T+ LDL   +GL+R   R        LD  E++ +   E+ R  +L +A 
Sbjct: 126 ATLKGFKPDLTLYLDLDPKLGLQRAAKR------GELDRIEQQAIDFFERARATYLKLAS 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
              ++  ++D++ +   V  +IL ++ 
Sbjct: 180 ED-EQIVVIDASQTMAEVHKDILAVLQ 205


>gi|312128360|ref|YP_003993234.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778379|gb|ADQ07865.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 210

 Score =  224 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 8/215 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GK+T I  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKSTQIVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 60  KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D+  H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------MAGKNDRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++   +RC  +++  S + V   +   +  L + +
Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVCREIERLFESK 207


>gi|153000971|ref|YP_001366652.1| thymidylate kinase [Shewanella baltica OS185]
 gi|160875684|ref|YP_001555000.1| thymidylate kinase [Shewanella baltica OS195]
 gi|217973069|ref|YP_002357820.1| thymidylate kinase [Shewanella baltica OS223]
 gi|304409049|ref|ZP_07390670.1| thymidylate kinase [Shewanella baltica OS183]
 gi|307303052|ref|ZP_07582807.1| thymidylate kinase [Shewanella baltica BA175]
 gi|151365589|gb|ABS08589.1| dTMP kinase [Shewanella baltica OS185]
 gi|160861206|gb|ABX49740.1| dTMP kinase [Shewanella baltica OS195]
 gi|217498204|gb|ACK46397.1| dTMP kinase [Shewanella baltica OS223]
 gi|304352870|gb|EFM17267.1| thymidylate kinase [Shewanella baltica OS183]
 gi|306913412|gb|EFN43834.1| thymidylate kinase [Shewanella baltica BA175]
 gi|315267873|gb|ADT94726.1| thymidylate kinase [Shewanella baltica OS678]
          Length = 208

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   D  
Sbjct: 6   KFIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPL 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++  AAR   V NVI+PAL +G+ +L DR   SS AYQG         ++++  
Sbjct: 66  CDEAECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMP-LVEAVST 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +++   PD T+ LDL   +GL R   R        LD  E++ +   E+ R  +L +A 
Sbjct: 125 ATLKGFKPDLTLYLDLDPKLGLTRAAKR------GELDRIEQQAIDFFERARATYLKLAS 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
              D   ++D++ +   V  +IL ++ 
Sbjct: 179 ED-DSIVVIDASQTMAEVHKDILAVLQ 204


>gi|254230304|ref|ZP_04923692.1| thymidylate kinase [Vibrio sp. Ex25]
 gi|151937164|gb|EDN56034.1| thymidylate kinase [Vibrio sp. Ex25]
          Length = 210

 Score =  224 bits (571), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGK+T I  +   L+    + +  TREPGGTP AE  R ++     
Sbjct: 1   MMKANFIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + 
Sbjct: 61  GEELKDMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMK 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 121 NLRDTTLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +IA   P    I+++  + + V+ +I + + E + ++
Sbjct: 175 EIAHADPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 210


>gi|257790898|ref|YP_003181504.1| thymidylate kinase [Eggerthella lenta DSM 2243]
 gi|317488389|ref|ZP_07946944.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA]
 gi|325830525|ref|ZP_08163978.1| dTMP kinase [Eggerthella sp. HGA1]
 gi|257474795|gb|ACV55115.1| thymidylate kinase [Eggerthella lenta DSM 2243]
 gi|316912509|gb|EFV34063.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA]
 gi|325487434|gb|EGC89875.1| dTMP kinase [Eggerthella sp. HGA1]
          Length = 244

 Score =  224 bits (571), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 76/211 (36%), Positives = 109/211 (51%), Gaps = 12/211 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+FI+FEG EGAGKTTHI  L   L+    +V   REPGGT   E  R V+L       
Sbjct: 13  RGIFITFEGGEGAGKTTHIRFLSETLRAHGREVLCLREPGGTEVGEQLRAVVLDPANGGM 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE +++ AAR   +  VI PAL  G ++LCDRF DS+ AYQ        +F+D + E
Sbjct: 73  SDEAELLIYEAARAQLMAQVIAPALARGAVVLCDRFTDSTVAYQAYGRGLPRMFVDRVNE 132

Query: 123 ISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + Q V PD TI++      ++GL R  +R         D  E+     H +  + FL+I
Sbjct: 133 FACQGVHPDRTILMATGGEANVGLVRATHR------GAADRLEQAGEEFHARVNEAFLEI 186

Query: 181 ARNQPDRCHIV--DS--AHSFQSVATNILNI 207
           AR  P+R  +V  D   + +  +V   + ++
Sbjct: 187 ARRDPERVRVVVSDGNKSQTAAAVFAELADL 217


>gi|254499174|ref|ZP_05111855.1| thymidylate kinase [Legionella drancourtii LLAP12]
 gi|254351608|gb|EET10462.1| thymidylate kinase [Legionella drancourtii LLAP12]
          Length = 212

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  I  EG+EGAGK+T +S +  +L R       TREPGGT   E  R ++        
Sbjct: 5   TGKLIVIEGLEGAGKSTAVSTVIDYLTRLEIKTITTREPGGTVIGELLRQIIKGTEYKGV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              ++E ++   AR+  +E VI+PAL +G  ++ DRF  S+ AYQG         +  L 
Sbjct: 65  LDDKSELLLLYTARIQLLEQVIKPALQQGTWVIADRFELSTMAYQGGGRGLNEQMIQQLS 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++    PD T+ LD+  + G+KRV++R         D  E++ +    +    ++   
Sbjct: 125 AFALDGFKPDLTLYLDISPEEGMKRVKSR------GEFDRIEQQSIDFFHRVHSSYIHHV 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           R  P+   ++D+      V   I  ++ E ++ +
Sbjct: 179 RTNPN-AVLIDAGLPLHEVQLAIQCVLKEFIEHK 211


>gi|260767879|ref|ZP_05876813.1| thymidylate kinase [Vibrio furnissii CIP 102972]
 gi|260615909|gb|EEX41094.1| thymidylate kinase [Vibrio furnissii CIP 102972]
          Length = 209

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 10/216 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           MNS  +I  EG+EGAGK+T I  +   L      D+  TREPGGT  AE  R ++     
Sbjct: 1   MNS-KYIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            E      E ++  AAR+  VENVI+PAL +   ++ DR   SS AYQG         + 
Sbjct: 60  GEVLQDMTELLLMYAARVQLVENVIKPALQQRHWVVGDRHDMSSQAYQGGGRQIARETMQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL++ ++    PD T+ LD+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++A    +    +++  S + V  +I   +   + +
Sbjct: 174 ELAAGD-ESVVTINAEQSIEQVTHDIKQALESWLNR 208


>gi|317407094|gb|EFV87102.1| tmk protein [Achromobacter xylosoxidans C54]
          Length = 207

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 10/214 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI+ EG++GAGK+TH   +  FL+ +  +V  TREPGGTP  E  R ++L    D 
Sbjct: 3   SRGRFITLEGVDGAGKSTHTEWIAEFLRGQGLEVVSTREPGGTPLGEKLRALVL---TDP 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G + E ++  AAR +H+  VI PAL  G  ++CDR+ D++YAYQG         + +L+
Sbjct: 60  MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGAERVAALE 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD T + D+P+++   R+       ++   D FER+     E+ R  +   A
Sbjct: 120 TWMQAG-RPDRTWLFDVPLEVARARLA------DAREPDRFEREGAAFFERTRAAYQARA 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +PDR  ++DS  +  ++   +   + ELV  R
Sbjct: 173 AAEPDRIRVIDSTRAIAAIRAELEAGLRELVAVR 206


>gi|295698602|ref|YP_003603257.1| thymidylate kinase [Candidatus Riesia pediculicola USDA]
 gi|291157415|gb|ADD79860.1| thymidylate kinase [Candidatus Riesia pediculicola USDA]
          Length = 217

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 118/212 (55%), Gaps = 6/212 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEF 62
           G +I  EG+EG+GKTT I  +K+ L ++ +D+   REPGGTP +E  R ++      ++F
Sbjct: 8   GRYIVVEGLEGSGKTTMIGFVKKMLIKEGFDILTVREPGGTPISEKIRKLIKKNFPEEKF 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E  +F AAR+  +EN+I P L  GK ++ DR   SSYAYQG +   +   +D + +
Sbjct: 68  LVKTELFMFYAARIQLMENIILPNLKSGKWVIGDRNFLSSYAYQGGKYGVKDDEIDKINK 127

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I++ +  PD  I LD+  +IG+ R+  R S +    LD  E++ +    + R  +L+I +
Sbjct: 128 IAIGKFQPDLIIYLDVFPEIGISRIHERKSSK----LDRIEKRSLDFFHQVRNRYLNIIK 183

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           NQ +   I+D+     SV     + +   +++
Sbjct: 184 NQKE-FMIIDANQDLSSVKRLFQHKICRWMKR 214


>gi|258542239|ref|YP_003187672.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633317|dbj|BAH99292.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636376|dbj|BAI02345.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639429|dbj|BAI05391.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642485|dbj|BAI08440.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645540|dbj|BAI11488.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648593|dbj|BAI14534.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651646|dbj|BAI17580.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654637|dbj|BAI20564.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-12]
          Length = 214

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EG GK+T + LLK  L+ +   V  TREPGG+  AE  R +LL     
Sbjct: 1   MACGMFITLEGAEGVGKSTQLRLLKENLEAQGQKVLTTREPGGSAGAEDLRQLLLFGKN- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A AE +   AAR DHV+ VI PAL  G+I+LCDRF DS+ AYQG   ++    + SL
Sbjct: 60  PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTMAYQGYGRANGDPAILSL 119

Query: 121 QEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            E   +   + PD T +L  P  I  +R+  R      A  D +E+ D   H +    F 
Sbjct: 120 IETLQKQLGLQPDVTFLLQAPRAISRQRLAAR-----GAPTDRYEQADEDFHARLADGFA 174

Query: 179 DIARNQPDRCHIVDSAH-SFQSVATNILNIVWELV 212
            IA+ +P R  +VD++  S + V   IL  +   +
Sbjct: 175 HIAKAEPQRVVVVDTSVYSAEQVNAQILKDIQTRL 209


>gi|124515019|gb|EAY56530.1| Thymidylate kinase [Leptospirillum rubarum]
          Length = 220

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 6/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ I+FEGI+G+GK+T    +   L      V ++REPG TP  E  R +LLS  V   
Sbjct: 6   TGILITFEGIDGSGKSTQAREIHNALSLAGLKVRLSREPGATPLGEEIRKILLSDSV-PV 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AE ++F A R  HV++V+RP+   G+ILL DRF D++ AYQG         +++L +
Sbjct: 65  GNLAELLLFLADRAQHVQDVLRPSRSSGEILLVDRFTDATTAYQGYGMGHPLPLIETLHK 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +Q++ P  T +LD+      +R++ R   +     +  E + +    K R  +L++A+
Sbjct: 125 TILQDIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFRKVRNGYLELAK 179

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             P R  ++D+    + +  +IL  +   +
Sbjct: 180 QNPHRFCVLDATLPREELTRSILKDLEPRL 209


>gi|149911598|ref|ZP_01900210.1| thymidylate kinase [Moritella sp. PE36]
 gi|149805319|gb|EDM65332.1| thymidylate kinase [Moritella sp. PE36]
          Length = 214

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 9/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE-F 62
            F+  EG+EGAGK+T +S +  +L  +   DV  TREPGGT  AE  R ++     +E  
Sbjct: 4   KFLVIEGLEGAGKSTAVSTVINWLAEQGITDVITTREPGGTKLAEKMRAIVKDVDTEEPL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE ++  AAR   VE+VI+PAL +G+ ++ DR   SS AYQG         L++L++
Sbjct: 64  TESAELMLMYAARAQLVEHVIKPALAKGQWVVGDRHDLSSIAYQGGGRGFDIGVLNTLRQ 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +++ +  PD T++LD+   +GL+R + R        LD  E + +   E+    + ++A 
Sbjct: 124 VAIGDFKPDMTLLLDIDPAVGLQRAKVR------GELDRIELEQLSFFERIGAKYQELAA 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
              D  + VD+     +V   I +++
Sbjct: 178 AD-DTIYSVDAGQDIDNVQAQIRDVL 202


>gi|32490843|ref|NP_871097.1| hypothetical protein WGLp094 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31340185|sp|Q8D3A7|KTHY_WIGBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|25166049|dbj|BAC24240.1| tmk [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 234

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 20/235 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58
           M    FI  EG+EG+GKT  IS +   L ++    V  TREPGGTP AE+ R ++    G
Sbjct: 1   MIKSKFIVIEGLEGSGKTNAISKIVNLLNKQGIKNVIFTREPGGTPLAESLRTLIKEGVG 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++    AE ++  AAR+  VE+VI+PAL  G  ++ DR   SS AYQG         L 
Sbjct: 61  YEKITDNAELLMIYAARIQLVESVIKPALENGSWVVGDRHDLSSLAYQGGGRKIDTKILK 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-----------------SACLDY 161
            L+E+ +++  PD T  LD+P  +GL R++ R ++R                     LD 
Sbjct: 121 MLREVFLRDFYPDLTFYLDIPPIMGLARIRARATVRAQIRDKVNKIKRNHSHDIKNALDR 180

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            E + +   ++ R+ + ++A    ++   +D++ S + V   I + + + ++K++
Sbjct: 181 IEVEPISFFDRTRKKYKELASKN-EKIITIDASKSLELVNKEIKHQLLKWLKKQI 234


>gi|300744314|ref|ZP_07073333.1| dTMP kinase [Rothia dentocariosa M567]
 gi|300380039|gb|EFJ76603.1| dTMP kinase [Rothia dentocariosa M567]
          Length = 249

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 83/215 (38%), Positives = 118/215 (54%), Gaps = 7/215 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI FEG +GAGKTT ++ L+  L+ + Y V  TREPGGTP  EA R ++L  G  E
Sbjct: 18  RRGLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSE 77

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A AEA++FAA+R  H    IRPAL  G ++L DR+LDSS AYQG   +     +  L 
Sbjct: 78  VDARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQGIGRNLGKDTITDLS 137

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + ++++P  TI+LD+P+    +R+ +R        +D  E +           F DIA
Sbjct: 138 RWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKACVHTAFADIA 191

Query: 182 RNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215
           R   D  H +VD   S  +V   +L +V  L++ R
Sbjct: 192 RQNADGAHYVVDGCGSVDAVHERVLEVVRPLLKSR 226


>gi|319941084|ref|ZP_08015420.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B]
 gi|319805441|gb|EFW02243.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B]
          Length = 203

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 8/209 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EGI+GAGK+T    L + L  +   V  TREPGGTP AE  R +LL    DE  
Sbjct: 3   GRFITIEGIDGAGKSTQTESLLKHLADQGVSVLHTREPGGTPLAEKIRAMLL---ADEMA 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +AE ++F AAR DHV  VIRP L  G+ +L DRF D++YAYQ          +++L+  
Sbjct: 60  PDAETLLFFAARADHVRRVIRPTLESGRWVLSDRFTDATYAYQVGGKGFSGEKVEALENW 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++    PD T++ D+        V        +   D FER       + R+ +L  A  
Sbjct: 120 TLGGFAPDLTLLFDIAPA-----VAAARLRARAGDQDRFERMGEAFFTRVREAYLARAAA 174

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P+R  I+D+    + V+ +I   +   +
Sbjct: 175 APERFLIIDADRPAKDVSADIFARISSWL 203


>gi|189347011|ref|YP_001943540.1| dTMP kinase [Chlorobium limicola DSM 245]
 gi|238692153|sp|B3EDD6|KTHY_CHLL2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189341158|gb|ACD90561.1| dTMP kinase [Chlorobium limicola DSM 245]
          Length = 219

 Score =  222 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 4/209 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L++ L   + D    REPGGT  AE  R +LL    +    
Sbjct: 1   MLITFEGIDGAGKSTQIRKLQKLLIGAHIDSITLREPGGTEVAEKIRQILLESRHE-ISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A+R + V+ VI PA+  G  ++ DRF DS+ AYQG       + L ++  +S
Sbjct: 60  IGELLLFSASRAELVQQVILPAIDNGTTVILDRFFDSTIAYQGYGREIDQVMLQTIITLS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              + PD T  LD+  +  L R  +  SL    + + LD  ER  +    K RQ +LDI 
Sbjct: 120 TFSLQPDITFYLDISPENALMRKFSEKSLPIAFDESELDRMERSGLDFFRKVRQGYLDII 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                R  ++D+    Q +   I+  + E
Sbjct: 180 HKNERRFVLLDALDDPQMIHKRIIASLKE 208


>gi|329113408|ref|ZP_08242189.1| Thymidylate kinase [Acetobacter pomorum DM001]
 gi|326697233|gb|EGE48893.1| Thymidylate kinase [Acetobacter pomorum DM001]
          Length = 215

 Score =  222 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 80/215 (37%), Positives = 113/215 (52%), Gaps = 9/215 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI+ EG EG GK+T + LLK  L+ +   V  TREPGG+  AE  R +LL     
Sbjct: 2   MACGMFITLEGAEGVGKSTQLRLLKEKLEAQGQKVLATREPGGSAGAEDLRQLLLFGKN- 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A AE +   AAR DHV+ VI PAL  G+I+LCDRF DS+ AYQG   ++    + SL
Sbjct: 61  PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTLAYQGYGRANGDPAILSL 120

Query: 121 QEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             I  +   + PD T +L  P  +  +R+  R      A  D +E+ D   H +    F 
Sbjct: 121 IAILQKQLGLQPDITFLLQAPRAVSRQRLAAR-----GAPTDRYEQADEAFHARLADGFA 175

Query: 179 DIARNQPDRCHIVDSAH-SFQSVATNILNIVWELV 212
            IA+ +P R  +VD++  S + V   IL  +   +
Sbjct: 176 HIAQAEPQRVVVVDTSVYSAEQVNAQILKDIQTRL 210


>gi|312877610|ref|ZP_07737568.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795620|gb|EFR11991.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 207

 Score =  222 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 8/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 60  KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D+  H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------IAGKTDRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++   +RC  +++  S + V   +L  +  L+
Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLYEIERLL 204


>gi|156975176|ref|YP_001446083.1| thymidylate kinase [Vibrio harveyi ATCC BAA-1116]
 gi|166223128|sp|A7MVG2|KTHY_VIBHB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|156526770|gb|ABU71856.1| hypothetical protein VIBHAR_02903 [Vibrio harveyi ATCC BAA-1116]
          Length = 210

 Score =  222 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGK+T I  +   L+    + +  TREPGGTP AE  R ++     
Sbjct: 1   MMKANFIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRGLVKEEHE 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++     E ++  AAR+  VENVI+PAL   + ++ DR   SS AYQG         + 
Sbjct: 61  GEDLKDMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMK 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ E  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L
Sbjct: 121 NLRDTTLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++A    D   I+++  S + VA +I   + + +  +
Sbjct: 175 ELANAD-DSIVIINAEQSIEDVAQDIKAALNKWLAAQ 210


>gi|262393774|ref|YP_003285628.1| thymidylate kinase [Vibrio sp. Ex25]
 gi|262337368|gb|ACY51163.1| thymidylate kinase [Vibrio sp. Ex25]
          Length = 209

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           FI  EG+EGAGK+T I  +   L+    + +  TREPGGTP AE  R ++      +E  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL  G+ ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L+IA  
Sbjct: 125 TLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P    I+++  + + V+ +I + + E + ++
Sbjct: 179 DPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 209


>gi|206603846|gb|EDZ40326.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG']
          Length = 220

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 9/212 (4%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN+   G+ I+FEGI+G+GK+T    +   L     +V ++REPG TP  E  R++LLS 
Sbjct: 1   MNNPATGILITFEGIDGSGKSTQARDIHNALSLAGLNVRLSREPGATPLGEEIRNILLSD 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            V   G  AE  +F A R +HV++V+RP+   G++LL DRF+D++ AYQG         +
Sbjct: 61  KV-PVGNLAELFLFLADRAEHVQDVLRPSRSNGEVLLVDRFIDATTAYQGYGMGHPLSLI 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++L +  +QE+ P  T +LD+      +R++ R   +     +  E + +   +K R  +
Sbjct: 120 ENLHKTILQEIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFQKVRNGY 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           L+IA+  P R  ++D+    + +   ILN + 
Sbjct: 175 LEIAKQNPHRFRVLDATLPREELNRAILNDLE 206


>gi|312793986|ref|YP_004026909.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181126|gb|ADQ41296.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 207

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 8/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 60  KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D   H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------IAGKTDRLDLEDFEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++   +RC  +++  S + V   +L  +  L+
Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLYEIERLL 204


>gi|221195667|ref|ZP_03568721.1| thymidylate kinase [Atopobium rimae ATCC 49626]
 gi|221184433|gb|EEE16826.1| thymidylate kinase [Atopobium rimae ATCC 49626]
          Length = 239

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GLFI+ EGI+G GK+T   LL   L + + ++   REPGGT  +E  R +LL     + 
Sbjct: 19  RGLFITLEGIDGVGKSTQADLLAEALMQTDKELVRLREPGGTAISEKIRALLLDASNTDM 78

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E +++ A+R   V  VI PAL  G I+LCDRF DS++AYQ          +    +
Sbjct: 79  ADECELLLYEASRAQLVRQVIEPALARGAIVLCDRFYDSTFAYQAGGRGIDEKVVRRAND 138

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    V+P  T+I DL      +R         +   D  E +        R+ ++ ++ 
Sbjct: 139 LGSCGVVPTRTLIFDLEPAEAFQRAT-------TNGADRMEAEGAAFQRCVREAYIRLSV 191

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +P R H+V +  +   V    +  + +LV +
Sbjct: 192 AEPSRVHVVSAYGTIAEVHARTVADLCDLVPE 223


>gi|148553408|ref|YP_001260990.1| thymidylate kinase [Sphingomonas wittichii RW1]
 gi|166987709|sp|A5V3I6|KTHY_SPHWW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148498598|gb|ABQ66852.1| thymidylate kinase [Sphingomonas wittichii RW1]
          Length = 208

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 82/209 (39%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ EG EG GK+T    L   L+ +  DV  TREPGG+  AEA R +LL    D + 
Sbjct: 3   GRFITLEGGEGVGKSTQAKALAAALRARGLDVVETREPGGSDGAEAIRRLLLEGAADRWN 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A AEA++FAAAR DHV   IRPA+  G+ ++CDRFLDSS AYQG  D      + +L  I
Sbjct: 63  ARAEALLFAAARADHVARTIRPAIEAGRWVVCDRFLDSSIAYQGGADGLGDEAIRTLHAI 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                +PD T++LD+PV     R     +    A  D FE++D   H++    F  IA  
Sbjct: 123 GSAGYLPDRTLLLDMPVFDAAFR----QAEAGIANSDRFEKRDEAFHDRVADSFRRIAAQ 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +P R   +++  S Q V   ++  + +L+
Sbjct: 179 EPARIRTINAQGSPQEVTARLIEALADLL 207


>gi|237653168|ref|YP_002889482.1| thymidylate kinase [Thauera sp. MZ1T]
 gi|237624415|gb|ACR01105.1| thymidylate kinase [Thauera sp. MZ1T]
          Length = 233

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 8/208 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEGI+GAGK++ I+ +   LQ    DV  TREPGGT   E  R        +  
Sbjct: 30  RGRFITFEGIDGAGKSSQIAAVVALLQAAGRDVDQTREPGGTALGERLRE---LLLHEPM 86

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E EA++  AAR +H+   I PAL  G+ ++CDRF D+++AYQ           D+L+ 
Sbjct: 87  HLETEAMLMFAARREHLAARIEPALAAGRWVVCDRFSDATFAYQVGGRGLDRAKFDALEA 146

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T++ DL   +   RV +          D FER+     E+ R  +L+ AR
Sbjct: 147 WVHPGLQPDLTLVFDLDPALAAARVAS-----TGVDPDRFEREQRDFFERVRAAYLERAR 201

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P R  ++D+A S +++  +I  +V E
Sbjct: 202 LAPLRICVIDAARSPEAIRADIERVVRE 229


>gi|120598611|ref|YP_963185.1| thymidylate kinase [Shewanella sp. W3-18-1]
 gi|146293310|ref|YP_001183734.1| thymidylate kinase [Shewanella putrefaciens CN-32]
 gi|120558704|gb|ABM24631.1| thymidylate kinase [Shewanella sp. W3-18-1]
 gi|145565000|gb|ABP75935.1| thymidylate kinase [Shewanella putrefaciens CN-32]
 gi|319426610|gb|ADV54684.1| thymidylate kinase [Shewanella putrefaciens 200]
          Length = 208

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 10/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ I+L++ F+++        TREPGGTP AE  R ++  +   D  
Sbjct: 6   KFIVIEGLEGAGKSSAITLIRDFIEKHTGRAPICTREPGGTPLAERIRDLVKIADPSDPL 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E+E ++  AAR   V NVI+PAL +G+ +L DR   SS AYQG         ++++  
Sbjct: 66  CDESECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +++   PD T+ LDL   +GL R   R        LD  E++ +   E+ R  +L +A 
Sbjct: 125 ATLKGFKPDLTLYLDLDPKLGLTRAAKR------GELDRIEQQTIDFFERARATYLKLAS 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
              D   ++D++ +   V  +IL ++ 
Sbjct: 179 ED-DSIVVIDASQTMAEVHKDILAVLQ 204


>gi|208780179|ref|ZP_03247521.1| thymidylate kinase [Francisella novicida FTG]
 gi|208743828|gb|EDZ90130.1| thymidylate kinase [Francisella novicida FTG]
          Length = 209

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S  FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D
Sbjct: 1   MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +
Sbjct: 60  EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +  +    PD  I LD+   +GL+R Q           D  E+  +    + R +F D
Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPMLGLQRAQK------VGSPDRIEKAGLEFFNRTRNVFKD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + +   D    +D+A S Q V   I  I+ +
Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203


>gi|83814827|ref|YP_446793.1| thymidylate kinase [Salinibacter ruber DSM 13855]
 gi|83756221|gb|ABC44334.1| thymidylate kinase [Salinibacter ruber DSM 13855]
          Length = 221

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 6/209 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L ++FEGI+G+GK+T    L   LQ + +   + REPGGT  +E  R VLL   ++    
Sbjct: 2   LLLTFEGIDGSGKSTQAHRLNEHLQERGHKTLLVREPGGTELSEQVRSVLLEPALN-VHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123
            AE ++F+AAR   V   IRPAL  G+I++CDRF DS+ AYQG   +     +L S    
Sbjct: 61  MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++PD T +++L  +      + R +    A  D  E +D   + +    +  +A  
Sbjct: 121 VTDGLVPDRTYLVELDPETA----RARRTEGNDAAGDRMEAEDEAFYHRVAAAYDTLADE 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R H +D   S +++   I   V  L+
Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205


>gi|33239604|ref|NP_874546.1| thymidylate kinase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|46576462|sp|Q7VE61|KTHY_PROMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33237129|gb|AAP99198.1| Thymidylate kinase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 220

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 16/213 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL-- 55
            G+F+  EGI+G GK+T I  L ++L           + +TREPGGT   ++ R +LL  
Sbjct: 2   KGIFLVLEGIDGCGKSTQIEHLAQWLPLSGLMPSAAKLFITREPGGTRLGKSLRQLLLGT 61

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           S   +      E +++AA R  HV  VI+P +  G  ++ DRF  S+ AYQG        
Sbjct: 62  SPTDESPKPLTELLLYAADRAQHVSQVIQPKINNGDWVISDRFSSSTLAYQGFGRRLDKS 121

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +  L+ I+ Q + PD T +L++PV   +KR       RE+   D  E +  +  ++   
Sbjct: 122 LIKELENIATQGITPDLTFLLEIPVSESIKR-------RENTRKDRIESEGEIFLKRVSD 174

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            F  IA+N  D   ++ +      V+  I N +
Sbjct: 175 GFSYIAKN--DNWLVIPANQKKDIVSKQIENKL 205


>gi|189183417|ref|YP_001937202.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda]
 gi|238692237|sp|B3CR61|KTHY_ORITI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189180188|dbj|BAG39968.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda]
          Length = 217

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GKTT   LL   L         TRE GGT  AE  R ++L     +  
Sbjct: 7   GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR +H+E  IRP L EGK ++CDRF+DS+  YQ E    Q L L+ L   
Sbjct: 64  ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSENSEEQQLILE-LHRK 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T+I+++   I ++R++ R   + +  L+ F+ ++   H+K    F+ +++ 
Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDSRNQQFHQKITDAFIQVSKL 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            P+R   ++     + V++ ++NI+   ++
Sbjct: 183 FPERIVQINGEPMIEDVSSEVINIINNKMK 212


>gi|148284569|ref|YP_001248659.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong]
 gi|166221759|sp|A5CDS9|KTHY_ORITB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146740008|emb|CAM80084.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong]
          Length = 217

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 4/210 (1%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EG+GKTT   LL   L         TRE GGT  AE  R ++L     +  
Sbjct: 7   GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR +H+E  IRP L EGK ++CDRF+DS+  YQ +    Q L L+ L   
Sbjct: 64  ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSKNSEEQQLILE-LHRK 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD T+I+++   I ++R++ R   + +  L+ F+ ++   H+K    F+ +++ 
Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDNRNQQFHQKITDAFIQVSKL 182

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            P+R   ++     + V++ ++NI+   ++
Sbjct: 183 FPERIVQINGEPMIEDVSSEVINIINNKMK 212


>gi|118498162|ref|YP_899212.1| thymidylate kinase [Francisella tularensis subsp. novicida U112]
 gi|194324335|ref|ZP_03058108.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE]
 gi|254373508|ref|ZP_04988995.1| thymidylate kinase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254374970|ref|ZP_04990450.1| thymidylate kinase [Francisella novicida GA99-3548]
 gi|166221743|sp|A0Q893|KTHY_FRATN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118424068|gb|ABK90458.1| thymidylate kinase [Francisella novicida U112]
 gi|151571233|gb|EDN36887.1| thymidylate kinase [Francisella novicida GA99-3549]
 gi|151572688|gb|EDN38342.1| thymidylate kinase [Francisella novicida GA99-3548]
 gi|194321400|gb|EDX18885.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE]
          Length = 209

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S  FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D
Sbjct: 1   MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +
Sbjct: 60  EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +  +    PD  I LD+   +GL+R Q           D  E+  +    + R +F D
Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRNVFKD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + +   D    +D+A S Q V   I  I+ +
Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203


>gi|116073928|ref|ZP_01471190.1| Thymidylate kinase [Synechococcus sp. RS9916]
 gi|116069233|gb|EAU74985.1| Thymidylate kinase [Synechococcus sp. RS9916]
          Length = 215

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 15/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
            G F+  EGI+G GKTT +  L  +L           +  TREPGGTP  +A R +LL  
Sbjct: 5   RGRFLVMEGIDGCGKTTQMQRLAEWLPGSGLMPSGAQLVQTREPGGTPLGQALRQLLLHP 64

Query: 58  GVD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                 G  AE +++AA R  HV+ VIRPAL  G  ++ DRF  S+ AYQG         
Sbjct: 65  PEAVAPGPVAELLLYAADRAQHVDQVIRPALARGDWVISDRFAGSTLAYQGYGRELNREL 124

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L++I+   + PD T +LDLP+ +   R       R     D  E       ++  + 
Sbjct: 125 IVQLEQIATTGLQPDATFLLDLPLAVSQAR-------RADQANDRIEAAGQAFLQRVSEG 177

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           F  +A  +   C  +D+     +V   I + +  
Sbjct: 178 FRVLAAGRGWWC--IDADQVPDAVTAQIRDRLQR 209


>gi|330723507|gb|AEC45877.1| thymidylate kinase [Mycoplasma hyorhinis MCLD]
          Length = 215

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEGI+G+GK+T I  L  +LQ +    ++ +TREPGG     AE  R++LL    +
Sbjct: 1   MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKYE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I+FAA+R  H+E +I P+L EGKI++ DRF+DSS AYQ   +      ++ L
Sbjct: 61  -ISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQAFGNKIDINQVEQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +    +  PD T  LD+P+    +R        +++  D  E K      K    +  +
Sbjct: 120 NDWISNKTQPDLTFWLDVPIQQAFER--------KTSDNDRIEDKGNKFFSKVCSGYEYL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           ++  P+R   +D+  +   V   I     E  +K V   ++
Sbjct: 172 SKKYPERIIRIDALQNEDKVFEQIKKAFEEKREKLVKKWNT 212


>gi|153835690|ref|ZP_01988357.1| thymidylate kinase [Vibrio harveyi HY01]
 gi|148867682|gb|EDL66956.1| thymidylate kinase [Vibrio harveyi HY01]
          Length = 209

 Score =  221 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 9/212 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           FI  EG+EGAGK+T I  +   L+    + +  TREPGGTP AE  R ++      ++  
Sbjct: 5   FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEDLK 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++  AAR+  VENVI+PAL   + ++ DR   SS AYQG         + +L++ 
Sbjct: 65  DMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ E  P  T+ +D+   +GL+R + R        LD  E+ D+   E+ R+ +L++A  
Sbjct: 125 TLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLELANA 178

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             D   I+++  S + VA +I   + + +  +
Sbjct: 179 D-DSIVIINAEQSIEDVAQDIKAALNKWLAAQ 209


>gi|294102043|ref|YP_003553901.1| thymidylate kinase [Aminobacterium colombiense DSM 12261]
 gi|293617023|gb|ADE57177.1| thymidylate kinase [Aminobacterium colombiense DSM 12261]
          Length = 203

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 9/211 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +FI+ EGI+G GK+T  + LK  LQ+K  + V  TREPGG    +  R +LL    D   
Sbjct: 1   MFITLEGIDGCGKSTQAAFLKEQLQQKKKEPVLWTREPGGWVHGDFVRTLLLEK--DLRH 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +E  +F   R +HV  VI PAL  G+I+LC+R+ DS+ AYQ          ++ L   
Sbjct: 59  ELSELFLFVIDRCEHVSQVISPALSCGQIVLCERYTDSTRAYQIWGRGLPEEKVEDLFAW 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                 PD T+ +D P+ + + R++           D  E +      +  + + ++++ 
Sbjct: 119 CSF-PEPDLTLWIDTPLPVAINRIKT-----TRGHFDRIESETDGFLNRVCEGYKELSKR 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            P R   +D +   + V+  I  +V   + K
Sbjct: 173 FPHRIVRIDGSQPTEEVSAQIWKVVEVHLSK 203


>gi|78213888|ref|YP_382667.1| thymidylate kinase [Synechococcus sp. CC9605]
 gi|123577474|sp|Q3AH20|KTHY_SYNSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78198347|gb|ABB36112.1| Thymidylate kinase [Synechococcus sp. CC9605]
          Length = 209

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 99/216 (45%), Gaps = 15/216 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLS- 56
           +G FI  EGI+G GKTT I  L  +L       K   V  TREPGGTP   + R +LL  
Sbjct: 2   TGRFIVLEGIDGCGKTTQIQHLLEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              +     AE +++AA R  HVE +IRPAL  G  ++ DRF  S+ AYQG         
Sbjct: 62  SDQEAPAPTAELMLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L++I+   + PD T+ L L V   L+R       R     D  E +     E+  Q 
Sbjct: 122 IQRLEQIATAGLQPDITLWLRLSVQESLQR-------RLGDKEDRIEAEGAAFLERVAQG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  +A  +      V +  S  +V   +   + E +
Sbjct: 175 FAQLA--EHRSWCAVAADQSASAVRAALERQLQEHL 208


>gi|260435535|ref|ZP_05789505.1| thymidylate kinase [Synechococcus sp. WH 8109]
 gi|260413409|gb|EEX06705.1| thymidylate kinase [Synechococcus sp. WH 8109]
          Length = 209

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 72/221 (32%), Positives = 103/221 (46%), Gaps = 19/221 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
           +G FI  EGI+G GKTT I  L  +L       K   V  TREPGGTP   + R +LL  
Sbjct: 2   TGRFIVLEGIDGCGKTTQIQHLIEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61

Query: 58  GV-DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              +     AE +++AA R  HVE +IRPAL  G  ++ DRF  S+ AYQG         
Sbjct: 62  ADQEAPAPTAELLLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+   + PD T+ L L V   L+R       R     D  E +     E+  Q 
Sbjct: 122 IQRLERIATTGLQPDLTLWLRLSVQESLQR-------RLGDKEDRIEAEGAAFLERVAQG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           F ++AR +      V +  S    A+ +   +    Q+R++
Sbjct: 175 FAELARQRS--WCAVAADQS----ASAVRAALERQFQERLA 209


>gi|187931061|ref|YP_001891045.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|238691529|sp|B2SF22|KTHY_FRATM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187711970|gb|ACD30267.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 209

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S  FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D
Sbjct: 1   MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +
Sbjct: 60  EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +  +    PD  I LD+   +GL+R Q           D  E+  +    K R++F D
Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNKTRKVFKD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + +   D    +D+A S Q V   I  I+ +
Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203


>gi|318040596|ref|ZP_07972552.1| thymidylate kinase [Synechococcus sp. CB0101]
          Length = 219

 Score =  221 bits (564), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
            G F+  EGI+G GKTT I  L+ +L R     +   + VTREPGGT    A R +LL  
Sbjct: 4   RGRFLVLEGIDGCGKTTQIEHLRHWLPRSGLMPEGAQLMVTREPGGTELGRALRQLLLHP 63

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G     + AE +++AA R  HV+  I PAL  G  +L DRF  S+ AYQG         
Sbjct: 64  PGAAAPCSTAELLLYAADRAQHVQQQILPALEAGHWVLSDRFSGSTAAYQGYGRGLSLAL 123

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +D L  I+ + + PD T++LD+P++  L+R  +R         D  E        +    
Sbjct: 124 IDQLSLIACRGLQPDLTLLLDVPLEESLRRRGHR-------AADRIEASGEAFLARVCAG 176

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           F+ +A   P     +D +   ++V+  +   +
Sbjct: 177 FVALAAQ-PG-WQRLDGSQPPEAVSAALEAAI 206


>gi|89901037|ref|YP_523508.1| thymidylate kinase [Rhodoferax ferrireducens T118]
 gi|122479112|sp|Q21W76|KTHY_RHOFD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|89345774|gb|ABD69977.1| thymidylate kinase [Rhodoferax ferrireducens T118]
          Length = 215

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 74/218 (33%), Positives = 115/218 (52%), Gaps = 18/218 (8%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M + G+FISFEGI+GAGK+THI  L +  + +   V +TREPGGTP AE  R ++L+   
Sbjct: 1   MTTEGIFISFEGIDGAGKSTHIDALAQAFRAQGRAVTLTREPGGTPLAEKLRVLVLN--- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D   A  EA++  AAR DH++ +I PAL  G ++LCDRF D+++AYQG         L  
Sbjct: 58  DAMDAMTEALLVFAARRDHLQQLIEPALARGDVVLCDRFTDATFAYQGAGRGFDLKILSF 117

Query: 120 LQEIS--VQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           L+     +Q +       PD T+  DL   I  +R+        +   D FE + V    
Sbjct: 118 LERTVQSIQGLEPDFIRNPDLTVWFDLAAAIAAQRLAG------ARSPDKFEAQPVEFFR 171

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +    +L+     P R   +++  + ++V  ++L+ V 
Sbjct: 172 RVSDGYLNRMTACPSRFARIEANQTREAVWQDVLHAVQ 209


>gi|119357439|ref|YP_912083.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266]
 gi|166221736|sp|A1BGY2|KTHY_CHLPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|119354788|gb|ABL65659.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266]
          Length = 219

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 4/209 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+GAGK+T I  L+  L +   +    REPGGT  AE  R +LL    +   A
Sbjct: 1   MLITFEGIDGAGKSTQIKKLQTVLNKAGVESVTLREPGGTEVAEKIRSILLESRHE-ISA 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F+A R + V+ VI PAL    +++ DRF DS+ AYQG         L+++   S
Sbjct: 60  VGELLLFSATRAELVQQVIIPALQTDAVVILDRFYDSTRAYQGYGRGIDLTILETIIAFS 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181
              ++PD T  LD+  +  + R  ++ SL    E++ LD  ER  +  + K R  + +I 
Sbjct: 120 TFNLIPDVTFYLDIKPEDAMIRKNSKKSLPLAFENSDLDRMERSGLEFYSKVRNGYFEII 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           R++  R  ++++      +   IL  + +
Sbjct: 180 RSEQHRFKVLNALEHPDDLHRQILETLRK 208


>gi|56707291|ref|YP_169187.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110669761|ref|YP_666318.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301328|ref|YP_001121296.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|224456356|ref|ZP_03664829.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254369973|ref|ZP_04985981.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874129|ref|ZP_05246839.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|73920819|sp|Q5NIF5|KTHY_FRATT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|122971099|sp|Q14JV8|KTHY_FRAT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221744|sp|A4IW74|KTHY_FRATW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56603783|emb|CAG44750.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320094|emb|CAL08133.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049105|gb|ABO46176.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151568219|gb|EDN33873.1| hypothetical protein FTBG_01572 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840128|gb|EET18564.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158410|gb|ADA77801.1| thymidylate kinase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 209

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S  FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D
Sbjct: 1   MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +
Sbjct: 60  EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +  +    PD  I LD+   +GL+R Q           D  E+  +    + R++F D
Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + +   D    +D+A S Q V   I  I+ +
Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203


>gi|294508726|ref|YP_003572785.1| Thymidylate kinase [Salinibacter ruber M8]
 gi|294345054|emb|CBH25832.1| Thymidylate kinase [Salinibacter ruber M8]
          Length = 221

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 6/209 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L ++FEGI+G+GK+T    L   LQ + ++  + REPGGT  +E  R VLL   ++    
Sbjct: 2   LLLTFEGIDGSGKSTQAHRLNEHLQERGHETLLVREPGGTELSEQVRSVLLEPTLN-VHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123
            AE ++F+AAR   V   IRPAL  G+I++CDRF DS+ AYQG   +     +L S    
Sbjct: 61  MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++PD T +++L  +    R   R    ++A  D  E +D   + +    +  +A  
Sbjct: 121 VTDGLVPDRTYLVELDPETARAR---RTEGDDAAG-DRMEAEDEAFYHRVAAAYDTLADE 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R H +D   S +++   I   V  L+
Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205


>gi|163782656|ref|ZP_02177653.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882229|gb|EDP75736.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 200

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 14/204 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GKTT    L  FL+ K  DV + REPGGTP  E  R +L++    E   
Sbjct: 1   MLITFEGIDGSGKTTQSKKLYEFLREKGLDVSLYREPGGTPLGEELRDILIN---KELNE 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F  AR   V   ++P +  G +++ DRF DS+ AYQG        F+  L E +
Sbjct: 58  RTELLLFEGARTQLVLERLKPDMERGMVVILDRFTDSTLAYQGYGRGLDLEFVKKLNEFA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD T +LD+  +  + R++ +           F+  +V   +K R+ FL+IAR +
Sbjct: 118 SFGIKPDITFLLDIEPETAVGRIREKS---------RFD--NVDFLKKVREGFLEIARKE 166

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            +R  ++D+    + V  +I   +
Sbjct: 167 SERVVVLDTHRGEEEVFGDIKETL 190


>gi|197294306|ref|YP_001798847.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853633|emb|CAM11504.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 209

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 115/208 (55%), Gaps = 5/208 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG E +GKTT   +L + L    + + +T+EPGG       R  +L+  +     
Sbjct: 1   MFISFEGGEASGKTTLARILAQKLSGNKHQIVLTKEPGGYHPFLFIREKILNPEMPPIDL 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + EA+++AA R +H++N+I PAL E KI++CDR+LDSS+ YQG        +++ + + +
Sbjct: 61  KTEALLYAADRNEHLKNIILPALKENKIVICDRYLDSSFVYQGYARKLGQKYIEYINDFA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++ + P+ T  LDL   I  KR++    L      +  + + +  H+K R+ +L +A+ +
Sbjct: 121 LKHL-PNITFYLDLDPVIAKKRLE----LFRPDKQNRLDLETIEFHQKIREGYLKLAQKE 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
             R   + + +S   +++ I   V  L+
Sbjct: 176 NKRIIKIQADNSLPQLSSLIYQKVKHLL 203


>gi|304372905|ref|YP_003856114.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1]
 gi|304309096|gb|ADM21576.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1]
          Length = 215

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEGI+G+GK+T I  L  +LQ +    ++ +TREPGG     AE  R++LL    +
Sbjct: 1   MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKYE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I+FAA+R  H+E +I P+L EGKI++ DRF+DSS AYQ   +      ++ L
Sbjct: 61  -ISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQVFGNEIDINQVEQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +    +  PD T  LD+P+    +R        +++  D  E K      K    +  +
Sbjct: 120 NDWISNKTQPDLTFWLDVPIQQAFER--------KTSDNDRIEDKGNKFFSKVCSGYEYL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           ++  P+R   +D+  +   V   I     E  +K V   ++
Sbjct: 172 SKKYPERIIRIDALQNEDKVFEQIKKAFEEKREKLVKKWNT 212


>gi|222528529|ref|YP_002572411.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455376|gb|ACM59638.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725]
          Length = 208

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 8/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 60  KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D+  H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------MAGKNDRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++   +RC  +++  S + V   +L  + +L+
Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLLEIEKLL 204


>gi|90406894|ref|ZP_01215085.1| thymidylate kinase [Psychromonas sp. CNPT3]
 gi|90311936|gb|EAS40030.1| thymidylate kinase [Psychromonas sp. CNPT3]
          Length = 218

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 11/212 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLL-SCGVD 60
            FI  EG+EGAGKTT I  +  +L  +      +  TREPGGT   E  R ++      +
Sbjct: 10  KFIVIEGLEGAGKTTAIRYIGNWLAEQGVPTSKMTYTREPGGTKLGEYMRDIIKMDLNDE 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +AE ++  A+R+  VE VI+PAL +G I++ DR   SS AYQG        F+ SL
Sbjct: 70  SLDDKAELLLMYASRVQLVEAVIKPALAQGHIVIGDRHNYSSLAYQGGGRGLDMHFIHSL 129

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++S+ +   D T+ LD+   +GL+R + R        LD  ER  +   E+ RQ+FL++
Sbjct: 130 KQLSLGDFKADFTLYLDIDPALGLQRARGR------GELDRIERLAIDFFERTRQVFLNL 183

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +  +    +D++ +   V   I   +   +
Sbjct: 184 VADD-ESAVTIDASKTPAQVEKAIFKQLDNWL 214


>gi|288575015|ref|ZP_06393372.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570756|gb|EFC92313.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 213

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SGLFIS EGI+G GK+T   LL+  L+ +   V +T+EPG        R +LL  G D 
Sbjct: 9   RSGLFISLEGIDGCGKSTQAMLLRDHLEERGRSVVLTKEPGDWSHGGEIRRILL--GGDL 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +F A R +H+  V+ PAL  G I++CDR+ DS+ AYQ         F++ L 
Sbjct: 67  RHEHTELFLFMADRCEHLLQVVIPALDRGDIVICDRYTDSTLAYQCFGRGLDPTFVEGLF 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  +PD T  +D+P+   L R+ +R        LD  E +D    ++ R  F  + 
Sbjct: 127 NW-SDFPVPDVTFWIDVPLSCSLGRISSR------GSLDRME-EDSDFLDRVRSGFQSLR 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  DR   +D       V + ++  +  L+
Sbjct: 179 ESYEDRIIRIDGEGEENVVFSRLMESLEGLI 209


>gi|302871135|ref|YP_003839771.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573994|gb|ADL41785.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47]
          Length = 210

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 8/215 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLFKVEKYLKDKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 60  KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSIVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I   ++ PD  I+L L  +I ++R+Q       +   +  + +D+  H +    F ++
Sbjct: 120 NSIFEDKIKPDLYIVLTLEPEIAIQRIQ------MAGKNNRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++   +RC  +++  S + V   +   +  L + +
Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVCREIEGLFESK 207


>gi|121996816|ref|YP_001001603.1| dTMP kinase [Halorhodospira halophila SL1]
 gi|171769495|sp|A1WSY9|KTHY_HALHL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|121588221|gb|ABM60801.1| thymidylate kinase [Halorhodospira halophila SL1]
          Length = 215

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/211 (34%), Positives = 104/211 (49%), Gaps = 6/211 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+ EG+EGAGKTT +  +++ L     D    TREPGGTP  EA R  LL      
Sbjct: 4   RGCFITVEGLEGAGKTTCLQAIEQMLLEAGIDRPLFTREPGGTPFGEALRGALLDPQYRG 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             AEAEA+   AAR +H+  VIRP L  G+ ++ DRF D++YAYQG         +  L+
Sbjct: 64  LTAEAEALTVFAARAEHLAQVIRPTLDAGRWVISDRFTDATYAYQGGGRGLGDERIAVLE 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD T++LD+   +G  RV +R         D FE++     +  R  +   A
Sbjct: 124 RWVHGGFTPDRTLLLDVDPTVGRSRVAHRGD-----GEDRFEQERDPFFQAARAAYARRA 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P+R   +D+      VA  +   V +L+
Sbjct: 179 AADPERFRCIDANRPEGEVAEQVRAGVADLL 209


>gi|332184711|gb|AEE26965.1| Thymidylate kinase [Francisella cf. novicida 3523]
          Length = 209

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S  FI  EG++GAGK+T I+ ++++L++ +     TREPGGT  AE  R+++L    D
Sbjct: 1   MQS-KFIVIEGLDGAGKSTAINFVRKYLEQNSLAAIYTREPGGTKIAEELRNLVLHNKYD 59

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +
Sbjct: 60  EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +  +    PD  I LD+   +GL+R Q           D  E+  +    + R++F D
Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPMLGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + + + D    +D+A S Q V   I  I+ +
Sbjct: 174 LVK-ESDNAIEIDAALSIQEVEKQIYLILDK 203


>gi|115315297|ref|YP_764020.1| thymidylate kinase [Francisella tularensis subsp. holarctica OSU18]
 gi|122324708|sp|Q0BKK1|KTHY_FRATO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|115130196|gb|ABI83383.1| dTMP kinase [Francisella tularensis subsp. holarctica OSU18]
          Length = 209

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S  FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D
Sbjct: 1   MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +
Sbjct: 60  EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L    +    PD  I LD+   +GL+R Q           D  E+  +    + R++F D
Sbjct: 120 LNNNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + ++  +    +D+A S Q V   I  I+ +
Sbjct: 174 LVKDLDNAIE-IDAAKSIQEVEKQIYLILDK 203


>gi|294141343|ref|YP_003557321.1| thymidylate kinase [Shewanella violacea DSS12]
 gi|293327812|dbj|BAJ02543.1| thymidylate kinase [Shewanella violacea DSS12]
          Length = 210

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 10/210 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59
           N   FI  EG+EGAGK++ ISL+  F+++        TREPGGTP AE  R ++  +   
Sbjct: 5   NKSKFIVIEGLEGAGKSSAISLVGDFIEKHTGLVPVCTREPGGTPLAERMRDLIKIADET 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++  AAR   V NVI+PAL  G  +L DR   SS AYQG         +  
Sbjct: 65  DPLCDEAECLLLYAARAQLVANVIKPALNRGAWVLGDRHNLSSLAYQGGGRGLMP-LVQV 123

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L + ++ +  PD T+ LD+    GL+R   R        LD  E++ +   E+ R  FL 
Sbjct: 124 LSKATLGDFKPDLTLYLDIDPAQGLQRAAKR------GELDRIEKQALDFFERARATFLS 177

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            A+   D   ++D+  +   V  +IL ++ 
Sbjct: 178 FAKED-DTIAVIDAGQTMAEVHKDILALLQ 206


>gi|89256933|ref|YP_514295.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS]
 gi|156503123|ref|YP_001429188.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009997|ref|ZP_02274928.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368198|ref|ZP_04984218.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257]
 gi|254369798|ref|ZP_04985808.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|290953993|ref|ZP_06558614.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1]
 gi|295312612|ref|ZP_06803364.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1]
 gi|122500313|sp|Q2A1V7|KTHY_FRATH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221742|sp|A7NE29|KTHY_FRATF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|89144764|emb|CAJ80099.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS]
 gi|134254008|gb|EBA53102.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257]
 gi|156253726|gb|ABU62232.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122757|gb|EDO66886.1| thymidylate kinase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 209

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 9/211 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S  FI  EG++GAGK+T IS ++++L++ N     TREPGGT  AE  R+++L    D
Sbjct: 1   MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG     +   + +
Sbjct: 60  EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L +  +    PD  I LD+   +GL+R Q           D  E+  +    + R++F D
Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + ++  +    +D+A S Q V   I  I+ +
Sbjct: 174 LVKDLDNAIE-IDAAKSIQEVEKQIYLILDK 203


>gi|312134417|ref|YP_004001755.1| thymidylate kinase [Caldicellulosiruptor owensensis OL]
 gi|311774468|gb|ADQ03955.1| thymidylate kinase [Caldicellulosiruptor owensensis OL]
          Length = 209

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 8/215 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRKGKLIVFEGNDGSGKTTQLFKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++ AA R +HV+NV+ PA+ EG I+LCDR++ SS  YQG         +  L
Sbjct: 60  KMDGLTEALLLAADRNEHVKNVLIPAMDEGYIVLCDRYILSSVVYQGIVRGVGIENILKL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D+  H +    F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLDPEIALQRIK------MAGKNDRLDLEDLEFHRRVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++   +RC  ++   S + V   +   +  L + R
Sbjct: 174 SKWF-ERCVNIEVQGSEKEVFEKVCCEIERLFESR 207


>gi|78183894|ref|YP_376328.1| thymidylate kinase [Synechococcus sp. CC9902]
 gi|123582163|sp|Q3B043|KTHY_SYNS9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78168188|gb|ABB25285.1| thymidylate kinase [Synechococcus sp. CC9902]
          Length = 209

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 15/217 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
           +G FI  +GI+G GK+T I  L ++L           +  TREPGGTP  ++ R +LL  
Sbjct: 2   TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTAQLICTREPGGTPLGQSIRELLLHT 61

Query: 58  GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             D+     AE +++AA R  HV+ VIRPAL+ G  +L DRF  S+ AYQG         
Sbjct: 62  EADQVPSVTAELLLYAADRAQHVDTVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRQL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+   + PD T  L +PV++ L+R       R     D  E +      +    
Sbjct: 122 ITRLESIATTGLEPDLTAWLMVPVEVSLQR-------RHGEKEDRIEAEGRAFLRRVADG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           F  +A  +      +D+  S   ++  +   + E +Q
Sbjct: 175 FAVLAEQR--NWSQIDAQQSVSKLSQVLEQTLRETLQ 209


>gi|228982456|ref|ZP_04142715.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
 gi|228776639|gb|EEM24947.1| Thymidylate kinase [Bacillus thuringiensis Bt407]
          Length = 206

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF+S EG EG+GK+  I  L  +L+ +  +   +REPGG   AE  R +++    +E
Sbjct: 3   TRGLFVSIEGGEGSGKSALIQGLSLYLEEQGMECLTSREPGGVKVAEEIRELIM---ENE 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++FA+AR +H +N I PAL EGKI++CDRF+DSS  YQG         + S+ 
Sbjct: 60  MDAITEALLFASARREHFKNKISPALTEGKIVICDRFVDSSIVYQGYVQGIGMDNVLSIN 119

Query: 122 EISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +++ + MP  T+ LD+   I L R+        +   + F+ K +  H+K R+ +L I
Sbjct: 120 SQALEGLVMPHLTLYLDVEPTIALNRIAQ-----NNRETNRFDEKSIEFHKKVREGYLLI 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                +R   VD++ S   V    +  +  ++
Sbjct: 175 EEKHSNRIKKVDASLSKDEVLQQSIEYIKNIL 206


>gi|76788910|ref|YP_327996.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13]
 gi|237802612|ref|YP_002887806.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804534|ref|YP_002888688.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310988|ref|ZP_05353558.1| thymidylate kinase [Chlamydia trachomatis 6276]
 gi|255317289|ref|ZP_05358535.1| thymidylate kinase [Chlamydia trachomatis 6276s]
 gi|123607082|sp|Q3KMH4|KTHY_CHLTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|76167440|gb|AAX50448.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13]
 gi|231272834|emb|CAX09743.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273846|emb|CAX10636.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT]
 gi|296435703|gb|ADH17877.1| thymidylate kinase [Chlamydia trachomatis G/9768]
 gi|296436627|gb|ADH18797.1| thymidylate kinase [Chlamydia trachomatis G/11222]
 gi|296437563|gb|ADH19724.1| thymidylate kinase [Chlamydia trachomatis G/11074]
 gi|297140062|gb|ADH96820.1| thymidylate kinase [Chlamydia trachomatis G/9301]
          Length = 203

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT  I  L + L  +  ++  TREPGG    ++ R +LL     +   
Sbjct: 1   MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F AAR  H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    
Sbjct: 60  YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V +   +PD T +LD+P   GL R   +        LD FE+K  + H+  R+ FL +A 
Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             PDR  ++D+    ++     L  +  L+
Sbjct: 174 KAPDRYKVLDALLPTEASVDQALLQIRALI 203


>gi|326387758|ref|ZP_08209364.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207804|gb|EGD58615.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 207

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 83/208 (39%), Positives = 122/208 (58%), Gaps = 4/208 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++G FI+ EG EG GK+T + LL + LQ   + V  TREPGGTP AEA R ++L+   +
Sbjct: 1   MSAGRFIALEGGEGVGKSTQLRLLAQALQADGHVVVTTREPGGTPGAEAIRAMVLANEGE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +G  AEA++FAAAR DHV+ +IRPAL  G+ +L DR+LDSS AYQG         + +L
Sbjct: 61  GWGPRAEALLFAAARADHVDRLIRPALERGEWVLTDRYLDSSRAYQGGGSGLSDDDILAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I  + ++PD TI+L L  +   +R+    +LR+    D    +D   H +    F   
Sbjct: 121 HRIGSEGLLPDRTILLTLDPEETARRL----TLRDEGRADRIGGRDAAYHARVAAAFRRF 176

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A  +P R  +VD++ + +SV   IL+ V
Sbjct: 177 AEAEPHRFTLVDASGTPESVHARILSAV 204


>gi|289548995|ref|YP_003473983.1| thymidylate kinase [Thermocrinis albus DSM 14484]
 gi|289182612|gb|ADC89856.1| thymidylate kinase [Thermocrinis albus DSM 14484]
          Length = 199

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 14/208 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+G+GKTT    L  FLQ++ Y   + ++PG TP AE  R +L      E   
Sbjct: 1   MLISIEGIDGSGKTTVAHALVDFLQKEGYPAVLFKDPGDTPLAEEIRSLLFK---YEMDP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F AAR       I PAL EGKI++ DRF+DS+ AYQG         +  L  I+
Sbjct: 58  ITELLLFEAARSSLTWEKILPALSEGKIVILDRFIDSTVAYQGYGREINLGTVSILNHIA 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + P+ T++L++P+ + L R+ +R           FER+      K R  ++ +A  +
Sbjct: 118 TRGIKPNLTLLLNVPLHVALSRLSDRS---------RFERE--EYLRKVRDAYILLAHQE 166

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
            +R  IVD++ SF+ V   +   V  ++
Sbjct: 167 KERIKIVDASRSFEEVFEEVKTEVLSVL 194


>gi|114563411|ref|YP_750924.1| dTMP kinase [Shewanella frigidimarina NCIMB 400]
 gi|122299553|sp|Q081H9|KTHY_SHEFN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|114334704|gb|ABI72086.1| thymidylate kinase [Shewanella frigidimarina NCIMB 400]
          Length = 215

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 10/205 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59
             G FI  EG+EGAGK++ I+L+   +++        TREPGGTP AE  R ++  +   
Sbjct: 4   QQGKFIVIEGLEGAGKSSAIALVNDIIKQHIGQAPVCTREPGGTPLAEKMRDLVKIADET 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++  AAR   + NVI+PAL  G+ +L DR   SS AYQG         + +
Sbjct: 64  DPLCDEAECLLIYAARTQLIANVIKPALSVGQWVLGDRHNLSSLAYQGGGRGLMP-LVKA 122

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + +  ++   PD T+ LD+   +GL R  +R        LD  E++ +   E+ R+ +L 
Sbjct: 123 VSDACLRGFKPDLTLYLDIDPTLGLSRAASR------GELDRIEQQAIDFFERARRTYLQ 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
           +A    D   ++D++ S + V  +I
Sbjct: 177 LAHED-DSIVVIDASQSMEQVHNDI 200


>gi|167627244|ref|YP_001677744.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|238687894|sp|B0TWY5|KTHY_FRAP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|167597245|gb|ABZ87243.1| dTMP kinase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 204

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
            FI  EG++GAGK+T I  +K++L  K+     TREPGGT  AE  R ++L    DE   
Sbjct: 3   KFIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIH 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG         L+ L E 
Sbjct: 63  PDSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGVDKLNVLNET 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +++  PD  I LD+   IGL R             D  E+  +   ++ R +F  +   
Sbjct: 123 FLKDCQPDLIIYLDIDPAIGLARAGK------VGSPDRIEKAGLAFFDRTRAVFKSLVAA 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
             +    +D++ S   +   I  I+ +
Sbjct: 177 NHNAYE-IDASQSIDVIEKEIYAILDK 202


>gi|296116333|ref|ZP_06834949.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977152|gb|EFG83914.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769]
          Length = 224

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 10/214 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +GLFI+FEG EGAGK+T + LL+  L     +  +  TREPGGTP AEA R  LL    D
Sbjct: 10  TGLFITFEGGEGAGKSTQVRLLQEHLATIMPSDRIVRTREPGGTPGAEAVRDFLLFGEHD 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119
                AE ++   AR DHV+ +IRPAL  GK+++ DRF DS+ AYQG          LD 
Sbjct: 70  -LSLRAETLMHFGARYDHVDRLIRPALEAGKVVISDRFTDSTAAYQGYGRGMGDPAILDL 128

Query: 120 LQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  +  Q    PD T ILD+P  +  +R++ R         D +E      H +  + F 
Sbjct: 129 IASLRQQTGARPDMTFILDVPRAMARERLRAR-----GNRPDRYETAAEAFHARVAEGFA 183

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            IAR +P RC  +D+A     VA  +   V   +
Sbjct: 184 AIARQEPGRCITLDAAQPPDIVAQAVARHVATRL 217


>gi|71892180|ref|YP_277912.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|123640937|sp|Q492Q6|KTHY_BLOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71796286|gb|AAZ41037.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 212

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 11/211 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCG- 58
           M++  FI+ EG++GAGKTT    + ++L +    D+  T EPGGTP ++  R ++   G 
Sbjct: 1   MDN-RFITIEGLDGAGKTTITHRVSKYLNQYGVTDILTTHEPGGTPVSDFLRVLIKYGGP 59

Query: 59  -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +   + +E ++  AARL  +ENVI+PAL +G  ++ DRF  SS AYQG       L L
Sbjct: 60  MNEPINSISELLMIYAARLQLIENVIKPALSKGYWVIGDRFDLSSQAYQGGGRGIDILLL 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +L       + PD T  LD+  ++ + R+ +R        LD  E++ +   ++ R  +
Sbjct: 120 HALSNKITNTLSPDLTFYLDISPELSISRINHRQK------LDRIEQEPLSFFDRVRSCY 173

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +A  + +    +D+  S + V+ +I   +
Sbjct: 174 KKLASERKN-IITIDATQSLEEVSMSIYRHL 203


>gi|170726335|ref|YP_001760361.1| thymidylate kinase [Shewanella woodyi ATCC 51908]
 gi|169811682|gb|ACA86266.1| dTMP kinase [Shewanella woodyi ATCC 51908]
          Length = 210

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 10/207 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLL-SCGVDEF 62
            FI  EG+EGAGK++ ISL++ F+++    V   TREPGGTP AE  R ++  +   D  
Sbjct: 8   KFIVIEGLEGAGKSSAISLVRDFIEKHTGAVPVCTREPGGTPLAERIRDLVKIADETDPL 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE ++F AAR   V NVI+PAL  G+ +L DR   SS AYQG         ++S+  
Sbjct: 68  CDEAECLLFYAARAQLVANVIKPALRRGEWVLGDRHNLSSLAYQGGGRGLS-TLVESVSR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++ +  PD TI LD+   +GL R  NR        LD  E +++   E+ R  FL  A+
Sbjct: 127 ATLGDFKPDLTIYLDIEPKLGLTRAANR------GELDRIEVEEIAFFERARHTFLSYAQ 180

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
              D   ++D+  +   V  +I+ ++ 
Sbjct: 181 QD-DSIQVIDAGQTMAEVHKDIVALLQ 206


>gi|42522597|ref|NP_967977.1| hypothetical protein Bd1040 [Bdellovibrio bacteriovorus HD100]
 gi|59798302|sp|Q6MP28|KTHY_BDEBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|39575129|emb|CAE78970.1| tmk [Bdellovibrio bacteriovorus HD100]
          Length = 214

 Score =  218 bits (556), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 1/206 (0%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI FEG++G+GK++ ++ L+R LQ +  +   TREPGGTP  +  R+++L         
Sbjct: 6   KFIVFEGLDGSGKSSLMAALERELQNRAINFLRTREPGGTPLGDEIRNMILRKEGPAPTP 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E +++ A+R  HV+ VIRPAL  G  +LCDRF  SS A+Q    +     +  L   +
Sbjct: 66  RTELLLYEASRSQHVDQVIRPALAAGTWVLCDRFAASSVAFQSGGRAISEADVVMLNTFA 125

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              +  D T++LDL V+   +R Q R ++      D  E +    HE  RQ FL  +R  
Sbjct: 126 TGGLKADITVLLDLSVEESRRRRQGRGAVT-GETEDRIESEADTFHENVRQSFLKQSRED 184

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
                ++D+  + + +   +L  + E
Sbjct: 185 AAAWIVLDARETPEVLFKQLLQSLTE 210


>gi|251771718|gb|EES52293.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum]
          Length = 252

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 6/220 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG++G+GK+T    LK  L   ++   +T+EPGGTPA    R +LL   +    
Sbjct: 39  GCLIVFEGMDGSGKSTQARRLKARLDGLSHPAVLTKEPGGTPAGARLREILLDPAL-PLA 97

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EAE  +F A R  HV+ ++ P L  G+ +L DR   ++ AYQ          + +L E+
Sbjct: 98  PEAELFLFEADRAMHVKTLLLPELRAGRTVLSDRLSFATVAYQSFGGGLSRELVSTLNEV 157

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++  V+PD T +LDLPV    +R++ R           FE       E+ R+ +L++AR 
Sbjct: 158 ALGGVVPDVTYLLDLPVSEMARRLRERGD-----GPTRFELLGGDYFERVREGYLELARI 212

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
              R  ++D+    +++   I   +      R +   S  
Sbjct: 213 HRGRTVVLDATRDPETLEGEIFEDLARRFPGRFATGGSPA 252


>gi|157375783|ref|YP_001474383.1| dTMP kinase [Shewanella sediminis HAW-EB3]
 gi|157318157|gb|ABV37255.1| dTMP kinase [Shewanella sediminis HAW-EB3]
          Length = 210

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 10/212 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59
            +  FI  EG+EGAGK++ ISL++ F+++        TREPGGTP AE  R ++  +   
Sbjct: 5   KTSKFIVIEGLEGAGKSSAISLVRDFIEKHTGTAPVCTREPGGTPLAERMRDLVKIADES 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    EAE ++  AAR   V NVI+PAL  G+ +L DR   SS AYQG         ++ 
Sbjct: 65  DPLCDEAECLLLYAARAQLVANVIKPALTRGEWVLGDRHNLSSLAYQGGGRGL-MDLVEV 123

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +   ++ E  PD TI LD+  ++GL R  +R        LD  E++++   E+ R  FL 
Sbjct: 124 VSHATLGEFKPDLTIYLDIDPELGLSRAASR------GELDRIEKQELAFFERARGTFLS 177

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            A    D   ++D+  +   V  +IL ++  +
Sbjct: 178 FASKD-DSIAVIDAGQTMAEVHKDILALLQSM 208


>gi|15604908|ref|NP_219692.1| thymidylate kinase [Chlamydia trachomatis D/UW-3/CX]
 gi|8134523|sp|O84191|KTHY_CHLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|3328593|gb|AAC67780.1| Thymidylate Kinase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748318|gb|ADI50864.1| Thymidylate kinase [Chlamydia trachomatis D-EC]
 gi|297749198|gb|ADI51876.1| Thymidylate kinase [Chlamydia trachomatis D-LC]
          Length = 203

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 105/210 (50%), Gaps = 9/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT  I  L + L  +  ++  TREPGG    ++ R +LL     +   
Sbjct: 1   MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F AAR  H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    
Sbjct: 60  YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V +   +PD T +LD+P   GL R   +        LD FE+K  + H   R+ FL +A 
Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHRSVREGFLALAE 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             PDR  ++D+    ++     L  +  L+
Sbjct: 174 KAPDRYKVLDALLPTEASVDQALLQIRALI 203


>gi|116626370|ref|YP_828526.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076]
 gi|116229532|gb|ABJ88241.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076]
          Length = 224

 Score =  217 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 1/205 (0%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG++G+GKTT +  L   L+     V  T EPGG P A+  R ++L     E  
Sbjct: 17  GIFITFEGMDGSGKTTQMHRLAERLRGMGRTVLETAEPGGPPIAQKIRRIVLDAANQELS 76

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE +++ A+R  +V+  I+PAL  G+I+L DRF DSS  YQG         + +L  I
Sbjct: 77  PTAEILLYFASRAQNVDQWIQPALARGEIVLADRFTDSSLVYQGIGRGLGADTVVALDRI 136

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + + PD TI++D+  +  L R + R +L +  C    + + +  H K    +  +A  
Sbjct: 137 ACRGLKPDLTILVDVDAEASLTRARAR-NLAQPHCETRMDDQALEFHLKVHAAYHALAAA 195

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +P+R  + +       +   I +IV
Sbjct: 196 EPERVKVANGRAGMDEIEREIWSIV 220


>gi|146329656|ref|YP_001210096.1| thymidylate kinase [Dichelobacter nodosus VCS1703A]
 gi|172047332|sp|A5EXE3|KTHY_DICNV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|146233126|gb|ABQ14104.1| thymidylate kinase [Dichelobacter nodosus VCS1703A]
          Length = 203

 Score =  217 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 8/210 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  +G EG+GK++ I  +  FLQ+    V  TREPGGT   EA R ++LS      
Sbjct: 2   RGKFICLDGTEGSGKSSQIQAICSFLQQHGKTVITTREPGGTQIGEAIRELVLSPHYQP- 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  E ++  AAR +H++ VI P L  G  ++ DRF D++YAYQG         + +L++
Sbjct: 61  QALTELLLILAARHEHLQTVILPHLAAGTWVISDRFNDATYAYQGYGRGIDLKIIKTLEQ 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I      PD   IL LP  I  +RV NR         D  E ++     +  Q +   A+
Sbjct: 121 IIQASFQPDLACILCLPEHIAAERVHNRAHDH-----DRIELENRAFFARVAQGYHARAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               R   +D++    SV   I + +  L+
Sbjct: 176 LPHARF--IDASGDQNSVFQQIRHHLELLL 203


>gi|123965393|ref|YP_001010474.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
 gi|166223101|sp|A2BUA6|KTHY_PROM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123199759|gb|ABM71367.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9515]
          Length = 210

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 15/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
            G FI  EGI+G GKTT I  + R+L           +  TREPGG+   +  R+++L  
Sbjct: 2   KGKFIVIEGIDGCGKTTQIDEISRWLPTSGLMGKNSKLIKTREPGGSLLGKKLRNLILDN 61

Query: 58  G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++  + AE ++++A R +HV  +I PAL +   ++ DRF DS+ AYQG         
Sbjct: 62  NKNNKPSSLAELLLYSADRAEHVSKIISPALKKEDWVISDRFSDSTLAYQGYGRHINLEI 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + +++ I  Q   PD TI L++  +  + R       R++   D  E + +   +K  + 
Sbjct: 122 IKNIESIVCQGEYPDLTIFLEISAEESILR-------RKNFVPDRMESEGINFLQKVNEG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           F  IA+    +  ++ +  +  +++  I   + +
Sbjct: 175 FKLIAKE--KKWKVISATQNITAISNEIKETLLK 206


>gi|119944852|ref|YP_942532.1| dTMP kinase [Psychromonas ingrahamii 37]
 gi|119863456|gb|ABM02933.1| thymidylate kinase [Psychromonas ingrahamii 37]
          Length = 223

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 65/212 (30%), Positives = 115/212 (54%), Gaps = 11/212 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLL-SCGVD 60
            FI  EG+EGAGK+T +S + ++L ++N    D   TREPGGT  AE  R ++      +
Sbjct: 15  KFIVIEGLEGAGKSTAVSYITKWLFKQNIATCDTVYTREPGGTELAEKMRDIVKIEVTGE 74

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +AE ++  AAR+  VE++I+PAL+ GKI++ DR   SS AYQG         ++ +
Sbjct: 75  KLDDKAELLLMYAARVQLVEHIIKPALVAGKIVVGDRHNMSSLAYQGGGRGIDLALIEVI 134

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +++++ +   D T+ LD+  ++GL+R + R        LD  ER+ +   ++ R +FL +
Sbjct: 135 KKLALGDFKADLTLYLDIDPELGLQRARGR------GELDRIERQAIDFFDRTRAVFLSL 188

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                +    +++  S + V   I   + + V
Sbjct: 189 VAKDKN-AVTINAGQSPELVEKAIFVALDKWV 219


>gi|167629308|ref|YP_001679807.1| thymidylate kinase [Heliobacterium modesticaldum Ice1]
 gi|167592048|gb|ABZ83796.1| thymidylate kinase [Heliobacterium modesticaldum Ice1]
          Length = 226

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFI+ EG +GAGKTT  +LL +  +   Y V  TREPGGTP +EAAR VLL   +    
Sbjct: 9   GLFITLEGADGAGKTTQGALLAQAFRILGYPVVETREPGGTPVSEAARRVLLDPSLKGMV 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AE  ++A AR   V  VIRPAL  G +++CDRF DS+ AYQG         L ++ E+
Sbjct: 69  PMAELFLYATARAQLVSEVIRPALASGAVVICDRFTDSTLAYQGFGRGLDLEQLAAINEM 128

Query: 124 SVQE--------VMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRR 174
           +           +         +    GL R +  R    +   +D  E ++   HE+ R
Sbjct: 129 ATGGLTPDLTLLLD--------IDTGEGLVRARLRRPEGTKWQGVDRMELEEAAFHERVR 180

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + FL +A     R   + +  +   V   I++    LV
Sbjct: 181 RGFLQLAEKDRARICPIAAGGAIAEVHRRIIDAARRLV 218


>gi|241667797|ref|ZP_04755375.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254876341|ref|ZP_05249051.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842362|gb|EET20776.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 204

 Score =  217 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
            FI  EG++GAGK+T I  +K++L  K+     TREPGGT  AE  R ++L    DE   
Sbjct: 3   KFIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIH 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++E ++  A R+ H  N+I PAL +G  ++ DRF  SS AYQG         L+ L E 
Sbjct: 63  PDSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGFDKLNVLNET 122

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +++  PD  I LD+   IGL R             D  E+  +   ++ R +F  +   
Sbjct: 123 FLKDCQPDLIIYLDIDPAIGLARAGK------VGSPDRIEKAGLAFFDRTRAVFKSLVAV 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
             +    +D++ S   +   I  I+ +
Sbjct: 177 NHNAYE-IDASQSIDVIEKEIYAILDK 202


>gi|148240580|ref|YP_001225967.1| thymidylate kinase [Synechococcus sp. WH 7803]
 gi|166223122|sp|A5GP05|KTHY_SYNPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|147849119|emb|CAK24670.1| Thymidylate kinase [Synechococcus sp. WH 7803]
          Length = 213

 Score =  217 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 19/222 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
            G F+  EGI+G GKTT +  L  +L       +   +H+TREPGGTP   A R +LL  
Sbjct: 2   KGRFLVLEGIDGCGKTTQLRQLAEWLPDSGLMPEGATLHLTREPGGTPLGRALRELLLHP 61

Query: 58  GVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +     EAE +++AA R  HV+  I PAL  G  +L DRF  S+ AYQG+        
Sbjct: 62  PDEAAPCPEAELLMYAADRAQHVQRRILPALACGDWVLSDRFSGSTLAYQGDGRGLDRAL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+   ++PD T+ LDL ++  + R       RE    D  E +      +    
Sbjct: 122 ILDLERIATAGLVPDVTLWLDLSLEASMAR-------REERTEDRIEAEGQAFLARVADG 174

Query: 177 FLDIARNQPDR-CHIVDSAHSFQSVATNILNIVW--ELVQKR 215
           F  +A    +R    + +A S + V   I   +     +++R
Sbjct: 175 FRQLAA---ERGWVGIPAALSPKEVHQAIRLALEGHAALRRR 213


>gi|242398141|ref|YP_002993565.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
 gi|259494284|sp|C6A0S1|KTHY_THESM RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|242264534|gb|ACS89216.1| probable thymidylate kinase [Thermococcus sibiricus MM 739]
          Length = 210

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 19/218 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60
           G+FI  EGI+GAGK+T   +L ++ + + Y+V +T+EP  T   +  R ++L  G +   
Sbjct: 2   GIFIVLEGIDGAGKSTQAKMLAKWFENRGYEVVLTKEPTDTAFGKLIRRLVLIGGKEGII 61

Query: 61  ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  EAEA++FAA R +HV+ +I P++  GK+++ DR+  SS AYQ  R     L L
Sbjct: 62  DGARISKEAEALLFAADRAEHVKKLIEPSIKAGKVVISDRYFYSSLAYQWARG----LDL 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L  ++      D  I+LDLPV   + R+  R    E   +       V + +K R+ +
Sbjct: 118 NWLINLNAFAPRADLVILLDLPVKESINRINGRSIRSEFDKI-------VELQKKVRKNY 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQK 214
           L +A    +   I+++    + +  +I  ++  EL +K
Sbjct: 171 LKLAEKFNE-IRIINALAPVEDIHNDITALIEHELFEK 207


>gi|162147582|ref|YP_001602043.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209542215|ref|YP_002274444.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786159|emb|CAP55741.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209529892|gb|ACI49829.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 215

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 111/213 (52%), Gaps = 8/213 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+FEG EGAGK+T    L+  L+    +V  TREPGGTP AEA R +LL  G D  
Sbjct: 2   AGLFITFEGGEGAGKSTQAQRLEAHLRAAGREVVRTREPGGTPGAEALRQLLLFGGHD-L 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +   AAR DHV+ +IRPAL  G +++CDRF+DS+ AYQG         +  L  
Sbjct: 61  SLRAEILAHFAARCDHVDQLIRPALARGAVVICDRFIDSTLAYQGYGLGRADPGILHLIA 120

Query: 123 I--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  +   + PD T++L L     L R++ R         D +E  D   H +    F  I
Sbjct: 121 VLGAQVGLAPDLTLVLMLERAGALARLRAR-----GGPADRYEAADEAFHARVADGFDTI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           AR +  RC  + +      VA +I  +V   ++
Sbjct: 176 ARAEAGRCVTIAADRPVDVVAGDIARLVDARLE 208


>gi|124262780|ref|YP_001023250.1| thymidylate kinase [Methylibium petroleiphilum PM1]
 gi|124262026|gb|ABM97015.1| thymidylate kinase [Methylibium petroleiphilum PM1]
          Length = 224

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 8/219 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I+   ++GAGK+T +  +   L+     +V VTREPGG+P AE  R ++L    D 
Sbjct: 7   RGRMITLSALDGAGKSTQVQTVVERLRDYYGIEVVVTREPGGSPVAERLRELVLHG--DV 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++F AAR DH+  VIRPAL  G+ ++CDRF+D S+AYQ           ++L+
Sbjct: 65  IDPVAEMMIFFAARQDHLAQVIRPALQAGRWVVCDRFVDCSWAYQVRGRGLARAEFEALE 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ ++   PD T +LD+   +              A  D FER+D+    + RQ + +  
Sbjct: 125 KMVLRGWRPDLTFLLDIEPVV-----AAARRRGRGAEADRFERQDLEFFGRVRQGYFERM 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
              P+R  ++D+A +   V   ++  + E V+  +   +
Sbjct: 180 VADPERFRVIDAAVAPGVVRKEVIAHLDEFVRSTLRETA 218


>gi|82701134|ref|YP_418234.1| putative thymidylate kinase [Pseudomonas phage EL]
 gi|82658039|emb|CAG27295.1| putative thymidylate kinase [Pseudomonas phage EL]
          Length = 215

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 9/214 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+F   EG++G GKTT ++ +  +L  +  DV  TREPGGTP     R +LLS      
Sbjct: 8   SGMFCVVEGLDGTGKTTVVNRITDWLVERGVDVVKTREPGGTPYCNRIRDLLLSLDEGGE 67

Query: 63  GA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           G     E ++F AAR+ H+E +++P+L  GK +LCDR++ ++ AYQGE        +  L
Sbjct: 68  GPCQMTELLLFNAARVQHLETLVKPSLQAGKFVLCDRYVHTTIAYQGEARGLGVGKILEL 127

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  Q+  P  T ILD PV++ L RV  R        ++  + + V  +EK R  +  +
Sbjct: 128 HRLLTQDFWPHFTFILDAPVEVVLDRVHQR------GGMNRLDSQTVEFYEKARTAYRRM 181

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +   D C ++D+  S   V   +   +  L  K
Sbjct: 182 GQTGRD-CALIDATVSEDEVFNQMTTYLERLCNK 214


>gi|94676700|ref|YP_588872.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|166221720|sp|Q1LT42|KTHY_BAUCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|94219850|gb|ABF14009.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 212

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 9/217 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58
           M S  FI  EG+EGAGKT+ I  +   L     +++  TR+PGGTP AE  R ++     
Sbjct: 1   MKS-KFIVIEGLEGAGKTSVIQQIITILHSNGIHNIISTRDPGGTPLAETIRDIIKKGMN 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      E ++  AAR   V  VI+PALM G  ++ DR+  SS AYQG         L 
Sbjct: 60  GEYITDYTELLLLYAARTQLVAQVIKPALMSGTWVISDRYDLSSQAYQGGGRGIDIRLLQ 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +L++ ++ +  PD TI LDLP      R++ R        LD  E + +   ++    + 
Sbjct: 120 NLRDAALGKFYPDLTIYLDLPPSKCRARIRARGI-----PLDRIEMESLSFFQRTSIRYR 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++  N   R   +D+  S   +   I N +   ++ +
Sbjct: 175 ELVAND-SRIITIDAQQSIAELNATIRNNIERWLKSQ 210


>gi|300814241|ref|ZP_07094517.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511665|gb|EFK38889.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 202

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 11/204 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG +G GK+T  +L+   L ++N +V  TREPGGT  +EA R ++L+    E   
Sbjct: 3   LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYREMDY 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I+PAL  GK++LC+RF+ SS AYQG   +     + ++ E +
Sbjct: 63  RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   I  L  +  L R        +    D  ER     H K R  + ++ +  
Sbjct: 123 TMGLEPDIVFIF-LNKEETLAR--------KLENADRLERAGDDFHNKVRDFYKNLQKK- 172

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            D  + +D+  S   V ++ L ++
Sbjct: 173 -DNYYFIDAWQSIDKVFSDTLEVL 195


>gi|289523214|ref|ZP_06440068.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503757|gb|EFD24921.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 209

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 14/213 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           GLFI+FEGI+G+GK+TH   L   L     N  V +TREPGG       R +LL      
Sbjct: 3   GLFITFEGIDGSGKSTHAKRLYEHLSNIFGNERVLITREPGGWSGGSQLRDILLHSN--- 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   +E  +F A R +HVE  I+PAL +G+I++C+R+ DS+ AYQG         ++ L 
Sbjct: 60  WRPWSEFFLFMADRCEHVEEQIKPALAKGQIVICERYTDSTLAYQGWGKGLPLEEMERLF 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +   +PD TI LD+ VD  +KR++ R      +  D  E +        R+ + +++
Sbjct: 120 SL-LDFPLPDLTIWLDISVDTAMKRIKAR------SASDRLEEE--RFLAVVRRGYEELS 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  P R   V S    + V   I  +V   + +
Sbjct: 171 KRNPVRIRRVFSGDEEEKVFEEIARVVEGFMDE 203


>gi|77413425|ref|ZP_00789617.1| thymidylate kinase [Streptococcus agalactiae 515]
 gi|77160519|gb|EAO71638.1| thymidylate kinase [Streptococcus agalactiae 515]
          Length = 185

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 103/192 (53%), Gaps = 7/192 (3%)

Query: 23  LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV 82
           +L+  L +   D+  TREPGG   +E  RH++L     +   + E +++ AAR  H+   
Sbjct: 1   MLREKLSQ---DILTTREPGGVTISEEIRHIILDVKHTQMDKKTELLLYMAARRQHLVEK 57

Query: 83  IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDI 142
           + PAL EGKI+L DRF+DSS AYQG         +  L + +     PD T+  D+P ++
Sbjct: 58  VLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKWLNDYATDSHKPDLTLYFDVPSEV 117

Query: 143 GLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202
           GL+R+Q          ++  + + + +H++ RQ +L++A ++P+R   +D++     V  
Sbjct: 118 GLERIQK----SVQREVNRLDLEQLDMHQRVRQGYLELADSEPNRIVTIDASQQLDEVIA 173

Query: 203 NILNIVWELVQK 214
              +I+ + + +
Sbjct: 174 ETFSIILDRINQ 185


>gi|269792630|ref|YP_003317534.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100265|gb|ACZ19252.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 205

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 11/213 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GLF++ EG++G+GKTT  S L  ++  +    V  TREPGG    +  R +LL  G 
Sbjct: 1   MPRGLFVTIEGVDGSGKTTQASKLASWIGDQLGRRVLWTREPGG-WGDDGIREMLLKGGW 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              G   E ++F A R +H   VI PAL EG++++C+R+ DS+ AYQ          LD 
Sbjct: 60  Q--GPYTETLLFLADRCEHCARVIGPALEEGRVVICERYQDSTLAYQAFGSGLGLEDLDR 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +    +    PD TI LDL  +    R+ +R        +D  E + +    + R  +  
Sbjct: 118 ISS-VLALPRPDVTIWLDLGPEEAALRLSSR------GGMDAIESRGMDFFARVRDGYRV 170

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    P R   V +  S + V   I   +  L+
Sbjct: 171 LWERDPSRIRRVPADGSPERVFELIKGELVRLL 203


>gi|313887553|ref|ZP_07821236.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846431|gb|EFR33809.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 202

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG +G+GK+T  +L+   L + N     TREPGGT  +E  R ++L   + E    
Sbjct: 4   FITFEGPDGSGKSTICNLVYDELIKNNIKTIKTREPGGTRISEKIRDIILDKDLKEMDMR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++++A+R  H    I PAL +G  +LC+R++ SS AYQG     +   + ++ + + 
Sbjct: 64  TEALLYSASRAQHTYEKIIPALEDGVTVLCERYVLSSLAYQGHARGQKLEDIRAINDFAT 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
               PD   I          R  N   + ++ AC D  E +    H+K R  + ++ +  
Sbjct: 124 GGKKPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNNLEKE- 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
            +  + +D   + + V  + + I+ E
Sbjct: 174 -ENYYFIDVNQTIEEVFGDCMKILKE 198


>gi|282855443|ref|ZP_06264764.1| dTMP kinase [Pyramidobacter piscolens W5455]
 gi|282586739|gb|EFB91986.1| dTMP kinase [Pyramidobacter piscolens W5455]
          Length = 201

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 9/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G+GK+T    L   L+R+   V  T EPG  P  +  R +LL+  +     
Sbjct: 1   MFITIEGIDGSGKSTQARRLAARLRREGKKVTETHEPGDWPHGDILRALLLNGRLR--HP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A R +HV  VI+PAL +G+ ++CDR+ DS+ AYQ      +   L+SL +  
Sbjct: 59  MTEIMLFVADRCEHVAQVIQPALDQGEFVVCDRYNDSTRAYQCWGRGLKEDILESLIKW- 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD T+ LDLPV+   KR+  R         D  E +D+  HE   + F ++A   
Sbjct: 118 CGIPEPDLTVWLDLPVEEARKRMAGR------GGSDRIEGEDLKFHEAVARGFKELAERN 171

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
             R   VD+      +   I + +  
Sbjct: 172 GSRFFRVDARAGEDEIEETIFSELKR 197


>gi|289706872|ref|ZP_06503213.1| dTMP kinase [Micrococcus luteus SK58]
 gi|289556422|gb|EFD49772.1| dTMP kinase [Micrococcus luteus SK58]
          Length = 219

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 1/214 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLF++ EG +G+GK+T    L   L+   ++V +TREPGG+   E  R +LL  G   
Sbjct: 7   HRGLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPGHAP 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H    +RPAL  G +++ DR++DSS AYQG         + +L 
Sbjct: 67  VDPRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   ++PD T+++D+       R   R +  E    D  ER+    HE  R  FL  A
Sbjct: 127 EWATDGLVPDLTVLIDVDAATAADRRDRRAAGGE-GTPDRMERETADRHEALRAAFLARA 185

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              P+R  ++D A   Q +    L  V      R
Sbjct: 186 AAAPERYLVLDGALPPQELTARALARVTAQAADR 219


>gi|160898829|ref|YP_001564411.1| thymidylate kinase [Delftia acidovorans SPH-1]
 gi|160364413|gb|ABX36026.1| dTMP kinase [Delftia acidovorans SPH-1]
          Length = 228

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/213 (34%), Positives = 109/213 (51%), Gaps = 17/213 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFISFEGI+GAGK++HI+ L +  + +   V +TREPGGTP AE  R ++L    D  
Sbjct: 7   AGLFISFEGIDGAGKSSHIASLAQAFRDQGRTVTLTREPGGTPLAEKLRALMLH---DAM 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               EA++  AAR DH+  VI PAL  G+++LCDRF D+++AYQG         L +L+ 
Sbjct: 64  DPLTEALIAFAARRDHLVQVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLQPLATLER 123

Query: 123 ISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +              P  T+  DLP ++  +R+ +      +   D FE +      +  
Sbjct: 124 MVQTGTAPQPDLLREPHLTLWFDLPAEVAAERLAS------ARVPDRFESEPGSFFARVA 177

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
           Q +   A   P R   +DS  S  +V   I  +
Sbjct: 178 QGYAARAAAAPQRFARIDSNASRHAVWQQITQV 210


>gi|166154398|ref|YP_001654516.1| thymidylate kinase [Chlamydia trachomatis 434/Bu]
 gi|166155273|ref|YP_001653528.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335657|ref|ZP_07223901.1| thymidylate kinase [Chlamydia trachomatis L2tet1]
 gi|238687405|sp|B0B9T8|KTHY_CHLT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238687461|sp|B0BBG8|KTHY_CHLTB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|165930386|emb|CAP03879.1| thymidylate kinase [Chlamydia trachomatis 434/Bu]
 gi|165931261|emb|CAP06833.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 203

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 9/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT  I  L + L  +  ++  TREPGG    ++ R +LL     +   
Sbjct: 1   MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F AAR  H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    
Sbjct: 60  YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V +   +PD   +LD+P   GL R   +        LD FE+K  + H+  R+ FL +A 
Sbjct: 120 VGDKPFLPDIIFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             PDR  ++D+    ++     L  +  L+
Sbjct: 174 KAPDRYKVLDALLPTEASVDQALLQIRALI 203


>gi|312623182|ref|YP_004024795.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203649|gb|ADQ46976.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 208

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 8/212 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG +G+GKTT +  ++++L+ K Y V  TREPGGT      R +LL     
Sbjct: 1   MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS  YQG         +  L
Sbjct: 60  KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I    + PD  I+L L  +I L+R++       +   D  + +D+  H      F ++
Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------MAGKNDKLDLEDLEFHRLVYSGFKEV 173

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++   +RC  +++  S + V   +L  + +L+
Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLLEIEKLL 204


>gi|94496389|ref|ZP_01302966.1| Thymidylate kinase [Sphingomonas sp. SKA58]
 gi|94424135|gb|EAT09159.1| Thymidylate kinase [Sphingomonas sp. SKA58]
          Length = 208

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 81/212 (38%), Positives = 121/212 (57%), Gaps = 5/212 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FIS EG EGAGK+T +  L R L+ +  DV  TREPGG+  AEA R +LL+ G D
Sbjct: 1   MTTGRFISLEGGEGAGKSTQLRALARTLRERGLDVLETREPGGSDGAEAIRTLLLTGGAD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +   AEA++FAAAR DH+E  IRPAL  G  +L DRFLDSS AYQG+ + S    + +L
Sbjct: 61  RWSPRAEALLFAAARADHIEKTIRPALARGAWVLSDRFLDSSRAYQGQGELSDSDIV-AL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I   + +PD T++L LP  +      +R   R+   +D    +D   H      F   
Sbjct: 120 HRIGSADFLPDRTLVLTLPDAV----AADRARARDGDHVDRIGGRDSRFHHAVADAFARF 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  + +R   +D++ + ++V   +++ + +L+
Sbjct: 176 AAQESERVRAIDASGTTEAVTQRLVDALADLL 207


>gi|282882208|ref|ZP_06290847.1| dTMP kinase [Peptoniphilus lacrimalis 315-B]
 gi|281297973|gb|EFA90430.1| dTMP kinase [Peptoniphilus lacrimalis 315-B]
          Length = 202

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/204 (33%), Positives = 109/204 (53%), Gaps = 11/204 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF++FEG +G GK+T  +L+   L ++N +V  TREPGGT  +EA R ++L+    E   
Sbjct: 3   LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYKEMDY 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++AA+R  HVE  I+PAL  GK++LC+RF+ SS AYQG   +     + ++ E +
Sbjct: 63  RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   I  L  +  L        LR+    D  ER     H K R  + ++ +  
Sbjct: 123 TMGLEPDIVFIF-LNKEETL--------LRKLENADRLERAGDDFHNKVRDFYKNLQKK- 172

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
            D  + +D+  S   V ++ L ++
Sbjct: 173 -DNYYFIDAWQSIDKVFSDTLEVL 195


>gi|294011646|ref|YP_003545106.1| dTMP kinase [Sphingobium japonicum UT26S]
 gi|292674976|dbj|BAI96494.1| dTMP kinase [Sphingobium japonicum UT26S]
          Length = 213

 Score =  215 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 111/211 (52%), Gaps = 5/211 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FIS EG EGAGK+T +  L   L+ +  DV  TREPGG+  AEA R +LL+ G D 
Sbjct: 7   TRGRFISLEGGEGAGKSTQLRALAAALRARGLDVVETREPGGSEGAEAIRALLLTGGADR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   AEA++FAAAR DHVE  IRPAL  G  +L DRFLDSS AYQG    +    L +L 
Sbjct: 67  WSPRAEALLFAAARADHVEKTIRPALERGAWVLSDRFLDSSRAYQGMGALTDADIL-ALH 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I     +PD T+ L LP +    R ++R    +    D    +D   H      F   A
Sbjct: 126 RIGSDGFLPDRTLFLTLPEEEASARARSR----DGDAADRIGGRDRDFHLAVSTAFHRFA 181

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P R   VD++    +V   ++  V +L+
Sbjct: 182 AQEPTRFLAVDASGEAGAVTARLIEAVRDLL 212


>gi|111225913|ref|YP_716707.1| thymidylate kinase (dTMP kinase) (partial match) [Frankia alni
           ACN14a]
 gi|111153445|emb|CAJ65203.1| Thymidylate kinase (dTMP kinase) (partial match) [Frankia alni
           ACN14a]
          Length = 679

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 15/233 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLF++ EG EGAG++T + LL+ +L     +V VT   GGT      R +L       
Sbjct: 447 HAGLFVAVEGAEGAGRSTQVELLRTWLAASGREVVVTSGSGGTTTGARLRELLFDPST-R 505

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  EA++ AA R +HV  VI PAL  G I++ DR++DS  A+Q    S     L  L 
Sbjct: 506 LHARTEALLAAADRAEHVSRVIEPALARGAIVITDRYVDSWIAFQCASRSVDAAELAVLA 565

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE---------- 171
           + +   ++PD T++LDL  D+G++R        E A     E  +    E          
Sbjct: 566 QWATHALVPDLTVLLDLSADLGMQRRPAGEPAAEPAEESVDEPAEESFREPVDEAGAELL 625

Query: 172 ----KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
               + R  FL +A+ +P R   VD+    + +   I  +V   V++R  PL 
Sbjct: 626 AYRSRVRDGFLRLAQGEPARYLTVDANRPREEIHAEIRAVVASRVERRAVPLG 678


>gi|317968090|ref|ZP_07969480.1| thymidylate kinase [Synechococcus sp. CB0205]
          Length = 214

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 15/206 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLS 56
             G F+  EGI+G GKTT I  LK++L       +   + VTREPGGT   +A R +LL 
Sbjct: 3   RRGRFLVLEGIDGCGKTTQIEALKQWLPSSGLMPEGAQLLVTREPGGTALGQALRQLLLH 62

Query: 57  CGVDEFGAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
              D       E +++AA R  HV+  I PAL  G  +L DRF+ S+ AYQG        
Sbjct: 63  PPGDAAPESTAELLLYAADRAQHVQQRIAPALEAGHWVLSDRFVGSTAAYQGYGRGLSLA 122

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ L  I+   + PD T++L++P+   L+R  +R +       D  E        +   
Sbjct: 123 LIEQLAGIATAGLEPDLTVLLEIPLAESLRRRGHRPA-------DRIEASGEAFLARVCA 175

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVA 201
            F  +A+        ++++ S ++V+
Sbjct: 176 GFTALAQQYG--WCRIEASQSPEAVS 199


>gi|239916913|ref|YP_002956471.1| thymidylate kinase [Micrococcus luteus NCTC 2665]
 gi|281414632|ref|ZP_06246374.1| thymidylate kinase [Micrococcus luteus NCTC 2665]
 gi|239838120|gb|ACS29917.1| thymidylate kinase [Micrococcus luteus NCTC 2665]
          Length = 219

 Score =  214 bits (547), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 1/214 (0%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLF++ EG +G+GK+T    L   L+   ++V +TREPGG+   E  R +LL      
Sbjct: 7   HRGLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPEHAP 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA++FAAAR  H    +RPAL  G +++ DR++DSS AYQG         + +L 
Sbjct: 67  VDPRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALN 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   ++PD T+++D+       R   R +  E    D  ER+    HE  R  FL  A
Sbjct: 127 EWATDGLVPDLTVLIDVDAATAADRRDRRAAGGE-GAPDRMERETADRHEALRAAFLARA 185

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              P+R  ++D A   Q +    L  V      R
Sbjct: 186 AAAPERYLVLDGALPPQELTARALARVTAQAADR 219


>gi|71894076|ref|YP_278184.1| thymidylate kinase [Mycoplasma synoviae 53]
 gi|123644541|sp|Q4A6Z8|KTHY_MYCS5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71850864|gb|AAZ43473.1| thymidylate kinase [Mycoplasma synoviae 53]
          Length = 214

 Score =  214 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 11/209 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT I+ L + L+   K  D  +TREPGG     +E  R ++L   ++
Sbjct: 1   MFITFEGLDGSGKTTVINELLKKLKDNFKFLDYVLTREPGGKDIKESEKIREMILDSDLE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    EA+++  +R  H++ VI PAL + KI+ CDR+ DS YAYQG   +    F  +L
Sbjct: 61  -FSPITEALLYTTSRRIHIDKVILPALAQNKIVFCDRYYDSFYAYQGYGRNLGMEFTKTL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E++V + +P+ T   D+      KR         +   D  E +D+  H +  + +L+I
Sbjct: 120 TELAVGKTIPNLTFFFDISPFETRKR-----RSENNLINDRLELEDLSFHNRVYEGYLEI 174

Query: 181 ARNQPD-RCHIVDSAHSFQSVATNILNIV 208
            +N  + R  +VD+      +   I N +
Sbjct: 175 IKNNKENRFVVVDATKPVNEIVDFIFNYL 203


>gi|289643672|ref|ZP_06475784.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
 gi|289506505|gb|EFD27492.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
          Length = 917

 Score =  214 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 4/163 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLFI+ EG EG+GK+T +  L+ +L     +V VTREPGGT      R +LL      
Sbjct: 506 HAGLFIALEGGEGSGKSTQVERLRSWLASSGREVVVTREPGGTALGVKLRELLLDPAA-R 564

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                EA+++AA R +HV  VI PAL  G I++ DRF+DSS AYQG         +  L 
Sbjct: 565 LHPRTEALLYAADRAEHVSRVIEPALARGAIVVSDRFIDSSIAYQGAGRQLGADDIAMLS 624

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS---LRESACLDY 161
             + + ++PD TI+LD+P   GL RV+ R S    R     D 
Sbjct: 625 RWATRSLLPDVTILLDIPARTGLARVRARASGNGSRHERPTDR 667



 Score = 83.2 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 30/57 (52%)

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +D  E +++  HE+ R  F  +A   PDR  ++D+  S  +V   I N+V   +++
Sbjct: 732 GVDRIEAEELSFHERVRDGFRQLAERTPDRYVVLDADRSPDTVHNQIRNVVTGYLRR 788


>gi|226226593|ref|YP_002760699.1| thymidylate kinase [Gemmatimonas aurantiaca T-27]
 gi|226089784|dbj|BAH38229.1| thymidylate kinase [Gemmatimonas aurantiaca T-27]
          Length = 237

 Score =  214 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF+  EG EG GKTT  + L   L+   ++V   REPGGT A +A R +LL        
Sbjct: 14  GLFVVLEGGEGVGKTTQWNRLASALRAVGHEVVAVREPGGTQAGDAIRTLLLDP-TSSLS 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++FAA+R   V +V+ PAL  G ++L DRFL S+YAYQG         L S+  +
Sbjct: 73  PGTEALLFAASRAQLVADVVEPALARGAVVLVDRFLLSTYAYQGAGRGLPLDMLSSVNRL 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
           +     PD T++L++P+D+ + RVQ R         D  E +D   H + +  F+     
Sbjct: 133 ATGGRAPDLTLLLNVPLDLAMARVQAR------GAADRMELEDAAFHVRVQAAFVAALSS 186

Query: 180 -IARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              +  P+      V +     +V    L  + +    R +
Sbjct: 187 TWQQAHPEIGPVIAVPAQGDIDTVTVRCLEALVQRWPARFT 227


>gi|113955289|ref|YP_731781.1| thymidylate kinase [Synechococcus sp. CC9311]
 gi|123327571|sp|Q0I6Z1|KTHY_SYNS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|113882640|gb|ABI47598.1| thymidylate kinase [Synechococcus sp. CC9311]
          Length = 212

 Score =  214 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 15/211 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58
           G  +  EGI+G GKTT +  L  +L +         + VTREPGGT    + R +LL   
Sbjct: 2   GRLLVLEGIDGCGKTTQLQQLSSWLPKSGLMPDESRLVVTREPGGTALGTSLRQLLLHPP 61

Query: 59  VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            D + G  AE +++AA R  HV+ VI+PAL  G  +L DRF  S+ AYQG         +
Sbjct: 62  QDADPGPTAELLLYAADRAQHVDRVIQPALERGDWVLSDRFTGSTMAYQGYGRGLNRELI 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L+ I+ + + PD T+ LD+P+ + ++R       R S   D  E + +   E+  + F
Sbjct: 122 TDLERIATRGLTPDMTVWLDIPLALSVQR-------RGSREEDRIEAEGLAFLERVSEGF 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            D+ + +      V +      VA  I   +
Sbjct: 175 SDMCKARD--WVSVVADRPLLEVAEAIQTAL 203


>gi|220903414|ref|YP_002478726.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|254808288|sp|B8J2G0|KTHY_DESDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219867713|gb|ACL48048.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 217

 Score =  214 bits (546), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 25/224 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEGIEGAGK+T I  L  +LQ + +D  +TREPGG+      R +LL        +
Sbjct: 1   MFVTFEGIEGAGKSTAIDYLSDYLQARGHDPVLTREPGGSALGRRLRALLLDVRTGGLAS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R  HV  VIRPAL  G+++LCDRF DS+ AYQG        +L SL   +
Sbjct: 61  RAELFLFLADRAQHVTEVIRPALEAGQVVLCDRFTDSTLAYQGYGRGLDTEYLRSLNTAA 120

Query: 125 VQE------------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
                          V              GL+R   R         +  F+ + +  HE
Sbjct: 121 TGGLEPDLTLLLDLPVR------------CGLERAGERNRSAGMVIAEGRFDSESLDFHE 168

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + R+ +  +A  +P+R  I+D++   + V     + +   +++R
Sbjct: 169 RVRRGYRALAEEEPERFAIIDASQPPEDVVLQCRSAIEAYLRRR 212


>gi|313672881|ref|YP_004050992.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939637|gb|ADR18829.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 214

 Score =  214 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 4/208 (1%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           + +GI+G GKTT I LL  +L   N   +VT+EPGGT      R +L+S        E E
Sbjct: 7   AIDGIDGCGKTTQIKLLSDYLAGLNIPFYVTKEPGGTDVGGILRKILISKDY-HVEPETE 65

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            ++++A RL+H + V+ P + +G  ++ DRF+ S+YAYQ          LD L+ ISV  
Sbjct: 66  LLLYSADRLEHQKKVVIPNMHKGYSVISDRFISSTYAYQVFGRGLDRSLLDFLRNISV-S 124

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARNQPD 186
           + PD TII+D+   + L+R +NR         +  FE  ++  + K R  FL  A N  +
Sbjct: 125 IYPDLTIIIDIEPSVALERAKNRLKKHGLMEKEGKFESLNIDFYAKVRDGFLWYADNFSN 184

Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214
              ++D   S +S+  +I N + E +  
Sbjct: 185 -VVVLDGNKSIESLFGDIKNRINEFIND 211


>gi|148259980|ref|YP_001234107.1| dTMP kinase [Acidiphilium cryptum JF-5]
 gi|326403065|ref|YP_004283146.1| thymidylate kinase [Acidiphilium multivorum AIU301]
 gi|146401661|gb|ABQ30188.1| thymidylate kinase [Acidiphilium cryptum JF-5]
 gi|325049926|dbj|BAJ80264.1| thymidylate kinase [Acidiphilium multivorum AIU301]
          Length = 210

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 9/213 (4%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+  G+FI+ EG EGAGK+T I+ L   L+   ++V  TREPGGTP AEA R ++L    
Sbjct: 1   MSRQGVFITLEGGEGAGKSTQIARLAARLRAAGHEVLTTREPGGTPGAEAIRALMLDPA- 59

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             F   A+ ++  AAR DHV  +IRPAL  G ++LCDRF DS+ AYQG         + +
Sbjct: 60  RHFAPLADTLLVFAARADHVAAIIRPALEHGAVVLCDRFTDSTMAYQGHGLGVDRAAIAT 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L   ++    PD T+ILDLP  I   R+ +R         D +E+ D     +    F  
Sbjct: 120 L--GAMIGATPDLTLILDLPDAIARARLAHR-----GGAADRYEQFDTGFAIRVADGFRA 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           IA  +PDRC +VD+A   + V   +  ++   +
Sbjct: 173 IAAAEPDRCVLVDAAGGIEDVTETLAGLIRARL 205


>gi|88807102|ref|ZP_01122614.1| Thymidylate kinase [Synechococcus sp. WH 7805]
 gi|88788316|gb|EAR19471.1| Thymidylate kinase [Synechococcus sp. WH 7805]
          Length = 213

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 15/213 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
           +G F+  EGI+G GKTT +  L  +L           +H+TREPGGTP   A R +LL  
Sbjct: 2   TGRFLVLEGIDGCGKTTQLRQLADWLPGSGLMPDGATLHLTREPGGTPLGRALRELLLHP 61

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   EAE +++AA R  HV+  I PAL  G  +L DRF  S+ AYQG         
Sbjct: 62  PDAAAPCPEAELLMYAADRAQHVQRRILPALKCGDWVLSDRFSGSTVAYQGHGRGLDQSL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+   ++PD T+ LDLP++  + R       R     D  E +      +    
Sbjct: 122 ILDLERIATAGLVPDVTLWLDLPLEASIAR-------RGDRAEDRIEAEGQAFLGRVANG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           F  +A  +      + +  S + V   I   + 
Sbjct: 175 FRVLAAERD--WVGIPADLSPEEVQRTIRLALE 205


>gi|123351693|ref|XP_001295357.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
 gi|121874114|gb|EAX82427.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
          Length = 202

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+FEG +G+GK+T  +L+   L + N +   TREPGGT  +E  R ++L   ++E    
Sbjct: 4   FITFEGPDGSGKSTICNLVYDELIKNNIETIKTREPGGTRISEKIRDIILDKDLNEMDMR 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++++A+R  H    I PAL +G  +LC+R++ SS AYQG     +   + ++ + + 
Sbjct: 64  TEALLYSASRAQHTYEKIIPALEDGITVLCERYVLSSLAYQGHARGQKLEDIRAINDFAT 123

Query: 126 QEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
               PD   I          R  N   + ++ AC D  E +    H+K R  + D+ +  
Sbjct: 124 GGKNPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNDLEKE- 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
               + +D   + + V  + + I+ E
Sbjct: 174 -GNYYFIDVNQTIEEVFGDCMKILKE 198


>gi|33864255|ref|NP_895815.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9313]
 gi|46576455|sp|Q7V4G2|KTHY_PROMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33641035|emb|CAE22164.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9313]
          Length = 216

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 19/223 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
           SG F+  EGI+G GKTT +  L  +L R     +   +H+TREPGGT    A R ++L  
Sbjct: 2   SGRFLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGIALRKLVLHP 61

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G       AE +++AA R  HV  +IRPAL +G  +L DRF  S+ AYQG         
Sbjct: 62  PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L++I+   ++PD T  L+LPV+  L R   R +       D  E + V    +    
Sbjct: 122 IQQLEQIATAGLVPDLTFWLELPVEESLLRRDARSN-------DRIEAEGVDFLTRVATG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           F  +AR +      + +    +SV+    + +   ++    PL
Sbjct: 175 FAVLARERS--WVPLQADQQVESVS----SALESQLKHHFGPL 211


>gi|326562040|gb|EGE12369.1| thymidylate kinase [Moraxella catarrhalis 46P47B1]
 gi|326564967|gb|EGE15168.1| thymidylate kinase [Moraxella catarrhalis 12P80B1]
 gi|326573572|gb|EGE23534.1| thymidylate kinase [Moraxella catarrhalis CO72]
          Length = 206

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEG EG GKTT I  L   L  +   V  TREPGG+  AE  R + L+   +  
Sbjct: 2   QGKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNTN-M 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQ 121
            A+ E ++  AAR DH+  VI PA+  GK ++ DRF DS+ AYQG      +   L  ++
Sbjct: 61  NADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIE 120

Query: 122 EISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +  Q   + PD T+ LDL V +G++R   R      +  D  E  D+   E+  Q    
Sbjct: 121 LLIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAY 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
                 +R H +D+  +   VA  I   +
Sbjct: 175 QHSQHSNRIHRIDANGTVAEVAARIDTAL 203


>gi|158312172|ref|YP_001504680.1| dTMP kinase [Frankia sp. EAN1pec]
 gi|158107577|gb|ABW09774.1| dTMP kinase [Frankia sp. EAN1pec]
          Length = 709

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 25/245 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GLFI+ EG  GAGKTT + LL+ +L     +V    E  GT      R  LL    + 
Sbjct: 466 HGGLFITVEGAAGAGKTTQLELLRSWLSSSGREVVPAYETDGTSLGAGLRD-LLDDPANR 524

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  E ++ AA R +HV  VI PAL  G I+L DR++DS+ A Q          L  L 
Sbjct: 525 LHARTELLLDAADRAEHVARVIEPALARGAIVLTDRYVDSAIACQALGQRIDSDELTVLT 584

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD------------------YFE 163
           + +   ++PD TI+LDLP +  L R  +   L   +  D                    +
Sbjct: 585 QWASHSLLPDVTILLDLPAEQALARGGSDPHLGRESEGDGSGHDGGAGRGGGAGHGAGPD 644

Query: 164 RKD------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           R        V  H + R+ F  +A   PDR  I+D+  S Q +   I  ++   ++  ++
Sbjct: 645 RSGTDPVAAVAYHRRVREHFRRLADEDPDRHVILDATLSPQELHRQIRAVIAGRLRPAIT 704

Query: 218 PLSSK 222
               +
Sbjct: 705 GDDPR 709


>gi|323136277|ref|ZP_08071359.1| thymidylate kinase [Methylocystis sp. ATCC 49242]
 gi|322398351|gb|EFY00871.1| thymidylate kinase [Methylocystis sp. ATCC 49242]
          Length = 226

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 93/220 (42%), Positives = 127/220 (57%), Gaps = 2/220 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T ++ L   L+ +  +V  TREPGGTP AE  R VLLS  +   
Sbjct: 9   RGRFITFEGGEGAGKSTQLARLSEHLRGRGIEVVATREPGGTPKAEKLREVLLSGRIAPL 68

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  AEA +FAAAR+DHVE++I PAL  G  +L DRF DS+ AYQG R       +  L+ 
Sbjct: 69  GPLAEAALFAAARIDHVESLIAPALARGAWVLSDRFADSTRAYQGARGGVDDASISLLER 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  V PD TIILDLP   GL   +           D FE ++ + HE+ R+ FLDIA 
Sbjct: 129 AAIGNVRPDLTIILDLPPQEGL--ARAASRRAAGVAPDRFEAEEELFHEELRRAFLDIAE 186

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            +P+RC +V+ A +   VA  I  +V      R+   +++
Sbjct: 187 QEPERCCVVNGALAADEVAQAIRQLVDARFLSRLGEAAAE 226


>gi|296112464|ref|YP_003626402.1| thymidylate kinase [Moraxella catarrhalis RH4]
 gi|295920158|gb|ADG60509.1| thymidylate kinase [Moraxella catarrhalis RH4]
 gi|326561596|gb|EGE11935.1| thymidylate kinase [Moraxella catarrhalis 7169]
 gi|326565335|gb|EGE15514.1| thymidylate kinase [Moraxella catarrhalis 103P14B1]
 gi|326568044|gb|EGE18134.1| thymidylate kinase [Moraxella catarrhalis BC7]
 gi|326570576|gb|EGE20614.1| thymidylate kinase [Moraxella catarrhalis BC1]
 gi|326570735|gb|EGE20761.1| thymidylate kinase [Moraxella catarrhalis BC8]
 gi|326577357|gb|EGE27243.1| thymidylate kinase [Moraxella catarrhalis 101P30B1]
 gi|326577843|gb|EGE27710.1| thymidylate kinase [Moraxella catarrhalis O35E]
          Length = 206

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 10/209 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FISFEG EG GKTT I  L   L  +   V  TREPGG+  AE  R + L+   +  
Sbjct: 2   QGKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNAN-M 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQ 121
            A+ E ++  AAR DH+  VI PA+  GK ++ DRF DS+ AYQG      +   L  ++
Sbjct: 61  NADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIE 120

Query: 122 EISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +  Q   + PD T+ LDL V +G++R   R      +  D  E  D+   E+  Q    
Sbjct: 121 LLIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAY 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
                 +R H +D+  +   VA  I   +
Sbjct: 175 QHSQHSNRIHRIDANGTVAEVAARIDTAL 203


>gi|312880075|ref|ZP_07739875.1| thymidylate kinase [Aminomonas paucivorans DSM 12260]
 gi|310783366|gb|EFQ23764.1| thymidylate kinase [Aminomonas paucivorans DSM 12260]
          Length = 211

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 14/213 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGV 59
             GLF++ EGI+G GK+T    L  +L+ ++    V  TREPGG P     R  +L    
Sbjct: 5   KEGLFLTLEGIDGCGKSTQAGRLASWLRERDPRRPVLWTREPGGWPGGADFRERILRGQW 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +     +E  +F A R +HV   I PAL  G+ +LC+R+ DS+ AYQ          L++
Sbjct: 65  E--HPWSEVFLFLADRCEHVLREILPALARGEQVLCERYHDSTLAYQSFGRGLP---LEA 119

Query: 120 LQEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           L+  S   +  +P  T++LDLPV+  L+R+Q R         D  E +     E+ R+ F
Sbjct: 120 LRRFSRDCRFPLPHRTLLLDLPVEDALRRLQQRE-----GAADRLEGEGRPFLERVRRGF 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           L +A  +P+R  +VD+    + V   +   V E
Sbjct: 175 LCLAEAEPERYAVVDARGDEEQVFARLCRAVEE 207


>gi|87310761|ref|ZP_01092888.1| thymidylate kinase [Blastopirellula marina DSM 3645]
 gi|87286518|gb|EAQ78425.1| thymidylate kinase [Blastopirellula marina DSM 3645]
          Length = 205

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 9/211 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F  F+G++G GK+T  +L   +L+ +   V   R+PG TP  E  R +LL     E   
Sbjct: 1   MFFVFDGLDGVGKSTQQTLFTAWLEMQGAKVVSCRDPGSTPLGERLRSILLDKSDLEIAP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E +++  AR   V   IRPAL  G  ++ DR+L ++ AYQG         + ++   +
Sbjct: 61  RSEMLLYMTARAQLVAETIRPALEAGAAVVSDRYLLANIAYQGYGGGVDVDTIRNVGLAA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              V+PD T +LDLP    L R+        +  LD  E + +   E+ R+ FL  A+  
Sbjct: 121 TDGVLPDATFLLDLPTKAALGRL--------NRALDRVESRGIEYFEQVREGFLAEAKKF 172

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +  HI+D++   + +   I  I   ++++R
Sbjct: 173 -ENVHIIDASRKVEEIQAEIRRIALTVLERR 202


>gi|260893950|ref|YP_003240047.1| thymidylate kinase [Ammonifex degensii KC4]
 gi|260866091|gb|ACX53197.1| thymidylate kinase [Ammonifex degensii KC4]
          Length = 202

 Score =  212 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  EGI+G GKTT   +L + L+ +  +V   REPGGT   EA R +L     +E 
Sbjct: 2   RGFFIVLEGIDGVGKTTQARILAQKLREQGREVVEVREPGGTRLGEAIRELLQK---EEL 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AEA +F A+R   VE VI+PAL +GK+++ DRF  S+ AYQG     +   L  L  
Sbjct: 59  APWAEACLFLASRAQLVEEVIKPALAKGKVVVGDRFSLSTLAYQGA-LGLEPDKLAQLNS 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T+++DL  +  L R +          L           E  R+ +L++A+
Sbjct: 118 WVTGGLEPDLTLVIDLKAEEALARGKGDLREEIRQKL-----------EIVRERYLNLAK 166

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +  +  +VD   S + V+  I  +V E + +
Sbjct: 167 ERAAKVLVVDGQGSVEEVSRRIWALVEEALAR 198


>gi|194246765|ref|YP_002004404.1| Thymidylate kinase [Candidatus Phytoplasma mali]
 gi|193807122|emb|CAP18560.1| Thymidylate kinase [Candidatus Phytoplasma mali]
          Length = 208

 Score =  212 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 119/212 (56%), Gaps = 5/212 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FISFEG EG GKT     L++ L  KNY   +T+EPGG    +  + +LL+    +   
Sbjct: 1   MFISFEGCEGTGKTVLSKKLEKKLIEKNYLTILTKEPGGCLQTQPIKKILLNSSFKKLHC 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E++++AA R++H+  +I P+L + KI++CDRFLDSS AYQG   +     +  +   +
Sbjct: 61  YTESLLYAADRIEHLNRIIIPSLQQKKIVICDRFLDSSVAYQGYGRNLGEELIYKINFYA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++ + PD T  +D+   IG++R++N         LD F+ + +  HE+ R+ +L+I +  
Sbjct: 121 LKYL-PDITFYIDIDPFIGVQRIKN----FRKEKLDNFDLEKMDFHERVREGYLNIFKKN 175

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             R  ++D   S +++ T I   V + +  +V
Sbjct: 176 KSRIILIDGNQSLENIFTIIYQKVIKFLNIKV 207


>gi|167855936|ref|ZP_02478684.1| thymidylate kinase [Haemophilus parasuis 29755]
 gi|167852930|gb|EDS24196.1| thymidylate kinase [Haemophilus parasuis 29755]
          Length = 208

 Score =  212 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61
            G FI  EG+EGAGK+    ++   L     +   TREPGGTP AEA R++       + 
Sbjct: 2   RGKFIVIEGLEGAGKSNAQRVVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEH 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR   VE VI PAL  GK ++ DR   SS AYQG         +D + 
Sbjct: 62  TTDKAEVLMIYAARTQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGL-AELVDEVG 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + + +  PD TI LD+   IGL+R + R        LD  E+ D+    + R+ ++ + 
Sbjct: 121 SVILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLV 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++ P +  ++++  + + V+ +I   V   +
Sbjct: 175 KDNP-KAVLINAEPAIEQVSADIQQAVEIFL 204


>gi|190573065|ref|YP_001970910.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a]
 gi|190010987|emb|CAQ44596.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a]
          Length = 221

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 22/220 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
            F+S EG EGAGKTT I+ ++  L+   ++V +TREPGGTP AE  R ++L    +    
Sbjct: 10  RFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAE 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AEAE ++  AAR  HV  VI+PAL  G  +L DRF DSSYAYQG        ++  L
Sbjct: 70  PLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADL 129

Query: 121 QEISV------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +  +V        ++       D+ V +G  R   R         D  E +     ++ R
Sbjct: 130 ERRAVGLLPGLTLLL-------DVDVAVGRARANGRDL-----WPDRIESEQDDFFQRVR 177

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++F   A+  P R  ++D+      VA +++  V   +Q 
Sbjct: 178 EVFRSRAQQDPQRFALIDAGQEQARVAADVVARVERWLQD 217


>gi|117925167|ref|YP_865784.1| thymidylate kinase [Magnetococcus sp. MC-1]
 gi|171460782|sp|A0L8T5|KTHY_MAGSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|117608923|gb|ABK44378.1| thymidylate kinase [Magnetococcus sp. MC-1]
          Length = 210

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 106/217 (48%), Gaps = 25/217 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG EGAGK+T I+ L + LQ     V  TREPGG P +E  R +L++   D+ 
Sbjct: 2   QGRFITFEGGEGAGKSTQIAQLTQSLQAHGVKVLCTREPGGCPISERIREILVTGQGDDL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  AAR +H+  VIRPAL  G  +LCDRF DS+ AYQG        +L  L +
Sbjct: 62  DGTSELLLILAARHEHIRQVIRPALASGHWVLCDRFEDSTLAYQGGGRGGDGPWLRQLGQ 121

Query: 123 ISVQEVMPDCTIILDL----------PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                         D+             +GL R + R    +      FE++ +  H++
Sbjct: 122 WIRG----------DVFPDLTLLLDLDPTVGLARSKRRGGQEQ-----RFEQEALSFHQQ 166

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            RQ FL +A+ +P R   +D+    Q VA  I   V 
Sbjct: 167 VRQAFLQMAQQEPQRMIPIDADQPVQMVAATIWREVE 203


>gi|260655331|ref|ZP_05860819.1| dTMP kinase [Jonquetella anthropi E3_33 E1]
 gi|260629779|gb|EEX47973.1| dTMP kinase [Jonquetella anthropi E3_33 E1]
          Length = 200

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G GK+T  +LL   L  +  DV  TREPGG P   A R +LL  G+   G+
Sbjct: 1   MFITLEGIDGCGKSTQAALLANLLAER-RDVVRTREPGGWPEGGALRELLLHGGL--CGS 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A R +H   VI PAL  G+ ++C+R+ DS+ AYQ          +++L +  
Sbjct: 58  WTEVLLFVADRCEHASKVILPALRRGETVICERYNDSTLAYQCWGRGLDREKVEALIDW- 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                P+ T+  DLPV++ L R  +R         D FE +++  H +  Q F +++R +
Sbjct: 117 CGLPQPEVTLWFDLPVELALSRRASR------GGCDRFEAQELAFHRRIAQGFAELSR-E 169

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
             R   +D A S   V   ++N + +
Sbjct: 170 TGRIVRIDGAQSEADVTEQMVNALRQ 195


>gi|288818972|ref|YP_003433320.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
 gi|288788372|dbj|BAI70119.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
 gi|308752557|gb|ADO46040.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6]
          Length = 199

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+ EGI+G+GKTT  +LL  +L+ K +   + R+PG TP AE  R +++S      
Sbjct: 2   KGFLITLEGIDGSGKTTQANLLYEYLRSKGHKASLYRDPGSTPLAEKIRELIMSFS---L 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F  AR   V   I P L +G +++ DRF+DS+ AYQG         ++ L  
Sbjct: 59  DPITELLLFETARSSLVWEKILPDLQKGNVVIVDRFIDSTVAYQGYGREINLGTVNVLNH 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+ +   PD T IL +P+++ L R+    +         FE  D     K R  +  I  
Sbjct: 119 IATRGRKPDLTFILHVPLEVALSRIGKDKT--------KFE--DKDFLRKVRDAYFLIQS 168

Query: 183 NQPDR-CHIVDSAHSFQSVATNILNIVWELV 212
           ++ +R  +++D+    + V   I+ IV   +
Sbjct: 169 SEKERQIYLIDANREKEEVFKEIVKIVESRL 199


>gi|15616958|ref|NP_240171.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219681711|ref|YP_002468097.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682266|ref|YP_002468650.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|11132949|sp|P57434|KTHY_BUCAI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|25288281|pir||A84971 dTMP kinase (EC 2.7.4.9) [imported] - Buchnera sp. (strain APS)
 gi|10039023|dbj|BAB13057.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|219621999|gb|ACL30155.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
           pisum)]
 gi|219624554|gb|ACL30709.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
          Length = 212

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 9/218 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58
           M    FI  EG+EGAGKT     +K  L++ +   V + R+PG TP AE  R ++     
Sbjct: 1   MIKSKFIVIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFN 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D    E E ++  AAR+  VE  I+PAL  G  ++ DR   SS AYQG         + 
Sbjct: 61  DDNLIKETELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIY 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            LQ + +   +PD TI LD+  +IGL R   R        LD  E + +   +K R+ +L
Sbjct: 121 QLQSLFLNNFIPDLTIYLDVSPEIGLARALKR------NPLDLIESRSLFFFKKTRRCYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           + ++       I+++  + + V  NI   +   + K+V
Sbjct: 175 EKSKLDKKTI-IINANLNIKKVTQNITKKMLNWLNKQV 211


>gi|319943555|ref|ZP_08017837.1| thymidylate kinase [Lautropia mirabilis ATCC 51599]
 gi|319743370|gb|EFV95775.1| thymidylate kinase [Lautropia mirabilis ATCC 51599]
          Length = 230

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 14/226 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEGI+GAGK+TH+     +L+ +   V ++REPGG+P AE  R        +E 
Sbjct: 8   QGCFITFEGIDGAGKSTHVGACVDWLRAQGETVVLSREPGGSPLAERLRE---LLLTEEM 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + EA++  AAR DH+  +IRPAL  G+ ++CDRF DS++AYQG        +L  L+ 
Sbjct: 65  QPQTEALLAFAARSDHLHTLIRPALAAGQWVVCDRFTDSTFAYQGGGSDVDTTWLAQLEA 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + P  T + DLP ++                 D FE + +   E+ R+ +     
Sbjct: 125 QVQDGLQPVRTYLFDLPPEV------AAARRAAVRSADRFEARALDYFERVRRAYQARVA 178

Query: 183 NQPDRCHIVDSAHSFQSV----ATNILNIVWELVQKRVSPLSSKKD 224
             P+R  ++D+  + + +      +++ +      +R +      D
Sbjct: 179 ADPERFCMLDATATPEQIGRWLQDDLVKVHRRW-HERAASRPGAGD 223


>gi|28493662|ref|NP_787823.1| thymidylate kinase [Tropheryma whipplei str. Twist]
 gi|28572855|ref|NP_789635.1| nucleotide kinase [Tropheryma whipplei TW08/27]
 gi|46576523|sp|Q83FM3|KTHY_TROWT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|46576525|sp|Q83HB8|KTHY_TROW8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28410988|emb|CAD67373.1| putative nucleotide kinase [Tropheryma whipplei TW08/27]
 gi|28476704|gb|AAO44792.1| thymidylate kinase [Tropheryma whipplei str. Twist]
          Length = 199

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 15/208 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++FEGI+G+GKT  ++    FL+     V +TREPG        R  +L+        
Sbjct: 1   MFVTFEGIDGSGKTAQLTAAGEFLKASGKQVVLTREPG---TISCIRDYVLASD---MDI 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA++++A R +++   + PAL  GK++L DR+LDS  AYQ   +      +  L E S
Sbjct: 55  RTEALLYSADRAENIAKNVIPALNAGKVVLQDRYLDSFLAYQLADNKLVETDIMRLFEFS 114

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q + PD T++ DL      +R++NR         D  ERK +  H K R I+L ++ + 
Sbjct: 115 SQGLRPDLTLLFDLTPACAQERLENR---------DRIERKPIDFHSKVRNIYLKLSADN 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
            DR  ++D++ SF  +   ++  +   +
Sbjct: 166 TDRIRVIDASQSFSKIHQQVIYHIERKL 193


>gi|194364655|ref|YP_002027265.1| dTMP kinase [Stenotrophomonas maltophilia R551-3]
 gi|194347459|gb|ACF50582.1| dTMP kinase [Stenotrophomonas maltophilia R551-3]
          Length = 221

 Score =  211 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 22/220 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
            F+S EG EGAGKTT I+ ++  L+   ++V +TREPGGTP AE  R ++L    +    
Sbjct: 10  RFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAE 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AEAE ++  AAR  HV  VI+PAL  G  +L DRF DSSYAYQG        ++  L
Sbjct: 70  PLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDLQWIADL 129

Query: 121 QEISV------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +  +V        ++       D+ V +G  R   R         D  E +     ++ R
Sbjct: 130 ERRAVGLLPGLTLLL-------DVEVAVGRARANGRDL-----WPDRIESEQDDFFQRVR 177

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++F   A+  P R  ++D+    + VA +++  V   +Q 
Sbjct: 178 EVFRSRAQQDPQRFALIDAGQVQERVAADVVACVERWLQD 217


>gi|258540440|ref|YP_003174939.1| thymidylate kinase [Lactobacillus rhamnosus Lc 705]
 gi|257152116|emb|CAR91088.1| Thymidylate kinase [Lactobacillus rhamnosus Lc 705]
          Length = 181

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 3/183 (1%)

Query: 36  HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
           H+TREPGG   +E  R V+L        A  EA+++AA+R  H+  VI+PAL  G I++C
Sbjct: 2   HLTREPGGAKISEMIRDVILDPKNTAMDARTEALLYAASRRQHLVEVIQPALAHGDIVVC 61

Query: 96  DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           DRF+DSS AYQG         +  + + +   + PD T+ LD+PV +GL R+      R+
Sbjct: 62  DRFVDSSVAYQGGGRQIGTQAVLQMNQFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ 121

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               D  +++ +  HE+    ++ +  + P R   VD+     +V T     + E   + 
Sbjct: 122 Y---DRLDQESLAFHERVHAAYMKLVADNPKRIVTVDATQPLAAVVTAAFMTITERFPEL 178

Query: 216 VSP 218
            + 
Sbjct: 179 FAK 181


>gi|15604527|ref|NP_221045.1| thymidylate kinase [Rickettsia prowazekii str. Madrid E]
 gi|6225595|sp|Q9ZCN9|KTHY_RICPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|3861221|emb|CAA15121.1| THYMIDYLATE KINASE (tmk) [Rickettsia prowazekii]
 gi|292572315|gb|ADE30230.1| Thymidylate kinase [Rickettsia prowazekii Rp22]
          Length = 203

 Score =  211 bits (538), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 13/212 (6%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN    G FI+FEG++G GK+T   +L  +L+ +   V +TRE GGT  AE  R +L++ 
Sbjct: 1   MNKLTQGKFITFEGVDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTTVAEKMREILVN- 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +E    +E +   AAR DH+   I PAL +G I++CDRF+DS+  YQG    +    +
Sbjct: 60  --EELLPMSELLQAMAARYDHMARKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLV 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL +  +  +MPD T  +D+     +KRV  R         + F+ + +  ++K    F
Sbjct: 118 YSLHKTLMPSLMPDITFFIDVEPHTAIKRVNARNMS------NKFDIRSIDFYKKIYTCF 171

Query: 178 LDIARNQPDRCHIVDSAH-SFQSVATNILNIV 208
            +++   P+R   + ++H S   V   I   +
Sbjct: 172 KELSNRFPERIKTIKASHLSPLEVHELIQKHL 203


>gi|190571302|ref|YP_001975660.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018699|ref|ZP_03334507.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238057702|sp|B3CM94|KTHY_WOLPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|190357574|emb|CAQ55013.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995650|gb|EEB56290.1| thymidylate kinase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 205

 Score =  211 bits (538), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 123/219 (56%), Gaps = 18/219 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL  + ++ + +  V +TREPGGT  AE  R  LL    D  
Sbjct: 1   MFITFEGIDGSGKTTQSELLANYFKQIHGENNVVLTREPGGTDFAEKIRGSLLK---DNI 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++F + R +H++ +I PAL EGK ++CDRF+DS+ AYQG         +  L +
Sbjct: 58  DPISELLLFTSMRYEHMKELILPALKEGKTVICDRFIDSTIAYQGYGLGVDLSLIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD T ILD+ V +GL R +++         + +E   +  + K R+ F +IA 
Sbjct: 118 LV-EIKYPDITFILDIDVQVGLSRAKDK---------NKYEEMSIDFYHKIRKGFQEIAI 167

Query: 183 NQPDRCHIVD--SAHSFQSVATNILNIVWELVQKRVSPL 219
            + +RC+++   +      V + I++++ +  +K + PL
Sbjct: 168 KESNRCNVITGIADKDNNKVYSEIIDVIRKK-KKGMQPL 205


>gi|89095549|ref|ZP_01168452.1| thymidylate kinase [Oceanospirillum sp. MED92]
 gi|89080187|gb|EAR59456.1| thymidylate kinase [Oceanospirillum sp. MED92]
          Length = 214

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 33/227 (14%)

Query: 1   MN---SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN   SG FI+ EG EG GK+T+I  L   L  +  +V +TREPGGTP AE  R +LL+ 
Sbjct: 1   MNQRLSGRFITVEGTEGVGKSTNIEYLCSLLDAQGIEVVLTREPGGTPLAEELRELLLAP 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +    + E ++  AAR  H+ENVI+PAL  G  ++ DRF D+++AYQG         +
Sbjct: 61  REETVSEDTELLLMFAARAQHLENVIKPALGRGAWVVSDRFTDATFAYQGGGRGV---NV 117

Query: 118 D---SLQEISVQEVMP---------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           D   +L+ I    + P                  V+ GLKR   R      +  D FER+
Sbjct: 118 DHIQALETIVQHGLQPDLTLLLDLD---------VETGLKRASKR------SEPDRFERE 162

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +   EK R  +L  A  +P+R  ++D+  S   V + I   +   +
Sbjct: 163 KLDFFEKVRSTYLQRASAEPERFAVIDAGRSIPDVQSQISEALIHFL 209


>gi|15835078|ref|NP_296837.1| thymidylate kinase [Chlamydia muridarum Nigg]
 gi|270285245|ref|ZP_06194639.1| thymidylate kinase [Chlamydia muridarum Nigg]
 gi|270289264|ref|ZP_06195566.1| thymidylate kinase [Chlamydia muridarum Weiss]
 gi|301336641|ref|ZP_07224843.1| thymidylate kinase [Chlamydia muridarum MopnTet14]
 gi|13629246|sp|Q9PKK5|KTHY_CHLMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|7190503|gb|AAF39311.1| thymidylate kinase [Chlamydia muridarum Nigg]
          Length = 203

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 74/210 (35%), Positives = 105/210 (50%), Gaps = 9/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EGAGKT     L + L  +  +V +TREPGG+   E  R ++L     E  +
Sbjct: 1   MFIVVEGGEGAGKTQFTQALSKRLMEEGKEVVLTREPGGSALGEQLRDLVLDV-TQEISS 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F AAR  H++  I PAL  GK ++CDRF DS+  YQG        F+  L    
Sbjct: 60  YAELLLFLAARAQHIQEKILPALESGKTVICDRFHDSTIVYQGIAGGLGEAFVTDLCYRV 119

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V +   +PD T +LDLP   GL R   + +      LD FE+K    H   R+ F+ +A 
Sbjct: 120 VGDEPFLPDITFLLDLPEKEGLLRKTRQKN------LDRFEQKPTSFHRAAREGFISLAE 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             PDR  I+D+    +      L  +  L+
Sbjct: 174 RSPDRYKILDALLPTEVSVDQALLQIRALI 203


>gi|58698493|ref|ZP_00373398.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225630910|ref|YP_002727701.1| thymidylate kinase [Wolbachia sp. wRi]
 gi|58534987|gb|EAL59081.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae]
 gi|225592891|gb|ACN95910.1| thymidylate kinase [Wolbachia sp. wRi]
          Length = 212

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++ + +  V +TREPGGT  AE  R VLL    +  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLL---TNNI 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG   S     +  L +
Sbjct: 74  DPISELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 LV-EIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208
            +P RC ++      +   V   I++ +
Sbjct: 184 KEPVRCSVITGIETKNDNHVHNEIIDKI 211


>gi|269959145|ref|YP_003328934.1| thymidylate kinase [Anaplasma centrale str. Israel]
 gi|269848976|gb|ACZ49620.1| thymidylate kinase [Anaplasma centrale str. Israel]
          Length = 211

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 17/218 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEG++G GKTT  +LL ++L      + V +TREPGGT   E  R VLL     + 
Sbjct: 1   MFITFEGVDGCGKTTQAALLAKYLSDLYGEHRVVLTREPGGTSFNELVREVLLGLTDYKM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GK+++ DRF DS+ AYQG         ++ L  
Sbjct: 61  DRITELMLFMAMRRESFVKVVSPGLLAGKVVISDRFTDSTVAYQGYGCGVDLSLVNMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   +V+PD T ++D+  ++ L R            L+  E +    ++K R+ F  I  
Sbjct: 121 LVA-DVVPDITFVMDISTELALTRT----------TLNGCESRSPEFYDKVREGFRAIVA 169

Query: 183 NQPDRCHIVD-SAHSFQS---VATNILNIVWELVQKRV 216
           + P RCH+V+ +  S +    V   I+ +  E+ + ++
Sbjct: 170 SNPHRCHMVNCAEDSVEDVYSVHDRIVALFHEVTKDKL 207


>gi|168334030|ref|ZP_02692249.1| thymidylate kinase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 200

 Score =  211 bits (537), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 12/209 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN GLFI+ EG EG+GKTT  SLLK   +  N  V  TREPGG  +AE+ R  +      
Sbjct: 1   MNRGLFIAIEGGEGSGKTTLCSLLKTHFEADNIPVIATREPGGIESAESIRDNIFQ---F 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ + +++ AAR +H+ + I PAL  GK++L DRF  S+ AYQG   +     +   
Sbjct: 58  DLDAKTDLLLYLAARREHLIHTILPALNAGKLVLSDRFYLSTLAYQGYASNLDIDIIQKF 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                 +++PD  II+DLP +IGL R        +   ++ F+ K +  H K  + +L +
Sbjct: 118 NNFVCDDILPDLNIIIDLPPNIGLSR--------KGVDINRFDLKGLDFHTKVYEGYLQL 169

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           + +  +  +++D   S  S+   I +++ 
Sbjct: 170 SASIKN-VYLIDGTSSLTSLEHQIYSLIK 197


>gi|51473864|ref|YP_067621.1| thymidylate kinase [Rickettsia typhi str. Wilmington]
 gi|59798217|sp|Q68W53|KTHY_RICTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|51460176|gb|AAU04139.1| TMPK [Rickettsia typhi str. Wilmington]
          Length = 203

 Score =  211 bits (537), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 13/212 (6%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN    G FI+FEG++G GK+T   +L  +L+ +   V +TRE GGT  AE  R +L+  
Sbjct: 1   MNKLTQGKFITFEGMDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTFVAEKMREILVH- 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +E    +E +   AAR DH+   I PAL +G I++CDRF+DS+  YQG    +    +
Sbjct: 60  --EELLPMSELLQAMAARYDHMVRKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLV 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL    +  +MPD T  +D+  D  +KRV +R         + F+R+ +  ++K    F
Sbjct: 118 YSLHTTLMPSLMPDITFFIDVEPDTAIKRVNSRNMS------NKFDRRRIDFYKKIYSCF 171

Query: 178 LDIARNQPDRCHIVDSAH-SFQSVATNILNIV 208
            +++   P+R   + ++H +   V   I   +
Sbjct: 172 QELSHRFPERIKTIKASHLNPLEVHELIQKHL 203


>gi|269215702|ref|ZP_06159556.1| dTMP kinase [Slackia exigua ATCC 700122]
 gi|269131189|gb|EEZ62264.1| dTMP kinase [Slackia exigua ATCC 700122]
          Length = 247

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 75/211 (35%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +SG+FI+FEG EGAGK+THI++L   L+R  ++V   REPGGT   EA R V+L    +E
Sbjct: 10  SSGVFITFEGGEGAGKSTHIAILAHVLERLGHEVLRLREPGGTSVGEALRAVVLDPDREE 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E  VF A+R   V  VI PAL  G ++LCDRF+DS+ AYQ          +  L 
Sbjct: 70  MCGLSELFVFEASRAQLVSQVIAPALERGAVVLCDRFIDSTTAYQAYGRGIDLDAVRFLN 129

Query: 122 EISVQEVMPDCTIILD-LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++ Q  +P  T+++       GL R         +   D  E+     H +  Q F  +
Sbjct: 130 LLACQGTLPARTLLMQAADAHAGLARAT-------TLGADRMEQASDRFHARVAQGFDAL 182

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A  +P+R   V SA S +  A  ++  V +L
Sbjct: 183 AACEPERFRAVSSAGSVEDTAVQVVASVSDL 213


>gi|254524318|ref|ZP_05136373.1| thymidylate kinase [Stenotrophomonas sp. SKA14]
 gi|219721909|gb|EED40434.1| thymidylate kinase [Stenotrophomonas sp. SKA14]
          Length = 221

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 22/220 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
            F+S EG EGAGKTT I+ ++  L+   ++V +TREPGGTP AE  R ++L    +    
Sbjct: 10  RFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAE 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              AEAE ++  AAR  HV  VI+PAL  G  +L DRF DSSYAYQG        ++  L
Sbjct: 70  PLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADL 129

Query: 121 QEISV------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +  +V        ++       D+ V +G  R   R         D  E +     ++ R
Sbjct: 130 ERRAVGLLPGLTLLL-------DVDVAVGRARANGRDL-----WPDRIESEQDDFFQRVR 177

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +F   A+  P R  ++D+    + VA +++  V   +Q 
Sbjct: 178 AVFRSRAQLDPQRFALIDAGQVQERVAADVVARVERWLQD 217


>gi|157826103|ref|YP_001493823.1| thymidylate kinase [Rickettsia akari str. Hartford]
 gi|166223109|sp|A8GPJ0|KTHY_RICAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157800061|gb|ABV75315.1| thymidylate kinase [Rickettsia akari str. Hartford]
          Length = 203

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG +G GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGDGIGKSTQAQMLYEYLKSQNTHVILTREVGGTAVAEKMRAILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +E +   AAR DH+   I PAL +G +++CDRF+DS+  YQG    +    + +L
Sbjct: 61  SLLPMSELLQAMAARYDHMARKIIPALQDGHVVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I +  +MP+ T  +D+  D  ++RV +R         + F+ + +  ++K    F  +
Sbjct: 121 HKILMPSLMPEITFFIDVEPDTAIERVNSRNMS------NKFDIRGIDFYKKVYDCFKAL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPPEVHELIKKHL 203


>gi|255021134|ref|ZP_05293186.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756]
 gi|254969394|gb|EET26904.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756]
          Length = 217

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 8/211 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G F++ EGIEGAGK+T +  ++R+   + + V +TREPGG P  EA R + L  G++ 
Sbjct: 9   RTGFFVTLEGIEGAGKSTALPFVQRYCMDRGWSVEITREPGGGPLGEALRAIFLDPGLEL 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   +++ A R +H+   I PAL  G ++LCDRF DS++AYQG   +     + SL 
Sbjct: 69  SVEEELLLLY-AGRHEHLRRKILPALQRGALVLCDRFEDSTFAYQGGGRAFPIERIQSLS 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     PD T+  D+   IG +R++ R         D  ER+ +   E+ R+++    
Sbjct: 128 RWTRLPRSPDLTLWFDVDPAIGAERIRARN-------PDRLERESLEFFERARRVYAARM 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +P R   + +  +   V   + +++ E +
Sbjct: 181 AAEPRRYRRICANGTLAEVEQQLASVLAECL 211


>gi|261856504|ref|YP_003263787.1| thymidylate kinase [Halothiobacillus neapolitanus c2]
 gi|261836973|gb|ACX96740.1| thymidylate kinase [Halothiobacillus neapolitanus c2]
          Length = 217

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 25/219 (11%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN+ G+FI+ EGIEGAGK+T I+ +  + +    +V  TREPGGTP AEA R VLL+   
Sbjct: 1   MNAPGIFITIEGIEGAGKSTAIAGVAEWFRAHGREVDCTREPGGTPIAEAIREVLLNPAE 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++     E ++  AAR  HV   I+P L  GK+++ DRF DSS AYQG         +++
Sbjct: 61  EDLVPPTELMLMFAARAQHVAGRIKPGLAAGKVVISDRFTDSSRAYQGAGRGMDRSLIET 120

Query: 120 LQEISVQEVMPDCTIILDLP----------VDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           L + + Q           +           VD+G+K      + R +   D FER+    
Sbjct: 121 LAQTAEQG----------VSPDLTLLLDLPVDVGMK---RAAARRGAGAHDRFERERHDF 167

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            E+ R  FL++A  Q  R  ++D+A     V   I   +
Sbjct: 168 FERVRAGFLELA-GQSTRFALIDAAAPIADVHMQIQTEL 205


>gi|124024337|ref|YP_001018644.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9303]
 gi|166223100|sp|A2CD19|KTHY_PROM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123964623|gb|ABM79379.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9303]
          Length = 216

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 19/223 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
           SG  +  EGI+G GKTT +  L  +L R     +   +H+TREPGGT    A R ++L  
Sbjct: 2   SGRLLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGMALRKLVLHP 61

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G       AE +++AA R  HV  +IRPAL +G  +L DRF  S+ AYQG         
Sbjct: 62  PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L++I+   ++PD T  L+L V+  L R   R +       D  E + V    +    
Sbjct: 122 IQQLEQIATAGLVPDLTFWLELSVEESLVRRDARSN-------DRIEAEGVDFLTRVATG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           F  +AR +      + +    +SV+    + +   ++    PL
Sbjct: 175 FAVLARERS--WVPLQADQQVESVS----SALESQLKHHFGPL 211


>gi|330814087|ref|YP_004358326.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487182|gb|AEA81587.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 211

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 7/213 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +N G+FI+FEGIEG+GK+T I LL +FL+   +  +++TREPGGT  +E  R +++    
Sbjct: 3   LNRGIFITFEGIEGSGKSTQIKLLYKFLKANVSKKIYLTREPGGTKISEKIRKLVIKDLN 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E     E  +  AAR +H  ++I+  L  G I+LCDR+LDS+ AYQ    S     +  
Sbjct: 63  EENNPLTELFLLFAARAEHY-DLIKEKLRSGYIVLCDRYLDSTIAYQHFNGSIDLKLIHY 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++  + + P+ TI+LD    +  KR+  R     +  LD F+R+ +      ++ FL 
Sbjct: 122 LQKLIDKNIRPNLTILLDANPSVSKKRMHLR-----AKKLDRFDRESLKKMNIIKKGFLA 176

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           IA+ +  R  +++       +   I + V + +
Sbjct: 177 IAKVEKKRIFVINGNADLDLIHDKIKSKVLKSL 209


>gi|33519860|ref|NP_878692.1| thymidylate kinase [Candidatus Blochmannia floridanus]
 gi|46576471|sp|Q7VR23|KTHY_BLOFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33504205|emb|CAD83467.1| thymidylate kinase [Candidatus Blochmannia floridanus]
          Length = 211

 Score =  210 bits (536), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 10/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58
           MN+  FI  EG++G+GKTT +  + ++   +   +V  T EPGGT  A     ++ +   
Sbjct: 1   MNN-RFIVVEGLDGSGKTTIVHKIVKYFYNQKITNVITTHEPGGTEIAYILSELIKNKSK 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++    +E ++  AAR   +ENVI+PAL +G  ++ DR   SS+AYQG       + L+
Sbjct: 60  NEKLTDLSELLMLYAARSQLLENVIKPALFKGDWVIGDRCDLSSFAYQGAGRKLNSVLLN 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L +  + +  P     LD+P ++ L R++NR        LD  E++ +    + R  + 
Sbjct: 120 MLSQYVINDFFPKLIFYLDIPSELVLSRIKNRK------VLDRIEQESLSFFNRVRSYYR 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +A    +   ++D++   + V   I   + + +
Sbjct: 174 KLAFL-KENIIMIDASQPLEQVCVFIYRYLDQWL 206


>gi|33866768|ref|NP_898327.1| thymidylate kinase [Synechococcus sp. WH 8102]
 gi|46576438|sp|Q7U437|KTHY_SYNPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33639369|emb|CAE08753.1| Thymidylate kinase [Synechococcus sp. WH 8102]
          Length = 209

 Score =  210 bits (536), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 15/216 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
           SG FI  +GI+G GK+T +  L  +L          ++  TREPGGTP   + R +LL  
Sbjct: 2   SGRFIVLDGIDGCGKSTQLDHLLGWLPGSGLMPAGAELISTREPGGTPLGRSVRELLLHT 61

Query: 58  GVDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             ++     AE +++AA R  HVE +I P L  G  ++ DRF  S+ AYQG         
Sbjct: 62  RAEQAPAPTAELLLYAADRAQHVERLILPTLERGDWVISDRFSGSTMAYQGYGRGLDRQL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +D L+ I+   V PD T+ L LP++  L+R       R+    D  E +  +  ++    
Sbjct: 122 IDQLERIATAGVQPDLTLWLTLPLEESLRR-------RQGDQADRIEAEGQVFLQRVIDG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  IA  +      + +    ++V+  +   + + +
Sbjct: 175 FAAIAEQRQ--WSAIAADRPPEAVSRALERELMDRL 208


>gi|219871835|ref|YP_002476210.1| thymidylate kinase [Haemophilus parasuis SH0165]
 gi|254808297|sp|B8F7G0|KTHY_HAEPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|219692039|gb|ACL33262.1| thymidylate kinase [Haemophilus parasuis SH0165]
          Length = 208

 Score =  210 bits (536), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 9/211 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61
            G FI  EG+EGAGK+    ++   L     +   TREPGGTP AEA R++       + 
Sbjct: 2   RGKFIVIEGLEGAGKSNAQRIVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEH 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++  AAR+  VE VI PAL  GK ++ DR   SS AYQG         +D + 
Sbjct: 62  TTDKAEVLMIYAARIQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGL-AELVDEVG 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + +  PD TI LD+   IGL+R + R        LD  E+ D+    + R+ ++ + 
Sbjct: 121 SAILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLV 174

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++ P +  ++++  + + V+ +I   V   +
Sbjct: 175 KDNP-KAVLINAEPAIEQVSADIQQAVEIFL 204


>gi|299136794|ref|ZP_07029977.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8]
 gi|298601309|gb|EFI57464.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8]
          Length = 221

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 9/222 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G FI+FEG++G+GKTT +  L   L+ +   V   R+PGGT   +  R VLL    +
Sbjct: 1   MSRGFFITFEGLDGSGKTTQLRRLAAALEAEGLRVVTLRQPGGTALGDRIRSVLLDSRTE 60

Query: 61  E----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                    AE  +  A R   + +VI PAL EG ++LCDR+ DSS AYQG         
Sbjct: 61  SELGGIAPTAEMALMFADRAQSLAHVIHPALAEGAVVLCDRYTDSSEAYQGAGRGLGSER 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIG----LKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + ++         P+ TI+L LP   G     +R   R         + FER+    + +
Sbjct: 121 IRAMHTAVCDGFQPELTILL-LPPLEGSLARARRRNERNVRTRGTDENRFEREGDEFYRR 179

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               +++IAR   +R   +    S +++A  I  IV E + +
Sbjct: 180 IYDQYVEIARRDSERVVTIAEEASIETIAERIRAIVRERMAQ 221


>gi|257064315|ref|YP_003143987.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476]
 gi|256791968|gb|ACV22638.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476]
          Length = 234

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 11/215 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G+FI+FEG EGAGK+THI+ L + L+   ++V   REPG T   E  R V+L     E
Sbjct: 7   HTGVFITFEGGEGAGKSTHINFLAQTLEACGFEVVRVREPGSTRIGEQLRGVVLDPENAE 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  ++ AAR   V   I+PAL  G I+LCDRF DS+ AYQG     +   +    
Sbjct: 67  MADWTELFIYEAARAQLVAEAIKPALERGAIVLCDRFTDSTLAYQGYGRGLELDRVRRAN 126

Query: 122 EISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           E++ Q ++PD T+++  P    GL R             D  E      H +  Q F+++
Sbjct: 127 ELACQGIVPDATVLMVAPNALEGLYRATK------DDGADRLESAGHDFHVRVNQAFVEL 180

Query: 181 ARNQPDRCHIVDS----AHSFQSVATNILNIVWEL 211
           A     R  +V S    + + QSV   + +++ +L
Sbjct: 181 AAQSKKRIRMVQSASAKSLTSQSVFKALADVLPQL 215


>gi|157828901|ref|YP_001495143.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933625|ref|YP_001650414.1| thymidylate kinase [Rickettsia rickettsii str. Iowa]
 gi|166223112|sp|A8GTB0|KTHY_RICRS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030838|sp|B0BUU8|KTHY_RICRO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157801382|gb|ABV76635.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908712|gb|ABY73008.1| thymidylate kinase [Rickettsia rickettsii str. Iowa]
          Length = 203

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E     AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELFQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|307544593|ref|YP_003897072.1| thymidylate kinase [Halomonas elongata DSM 2581]
 gi|307216617|emb|CBV41887.1| thymidylate kinase [Halomonas elongata DSM 2581]
          Length = 217

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 20/222 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG EG GK+T+++L+   L+ +  +V  TREPGGTP AEA R +LL    DE
Sbjct: 3   RRGRFITLEGGEGVGKSTNLALVADHLEARGLEVVRTREPGGTPRAEAIRKLLLDPAADE 62

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +AE ++  AAR  H+  V+RPAL  G  ++CDRF D+++AYQG         +  L
Sbjct: 63  PLDDDAELLLVFAARAQHLARVVRPALERGAWVVCDRFTDATFAYQGGGRGIDTARIAEL 122

Query: 121 QEISVQE---------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           +    +           MP         +    +R++ R   R+    D FER+     +
Sbjct: 123 EAFVQRGLTPDLTLLLDMP---------MAAAQRRLEGRLD-RDGGQRDRFERERAEFFD 172

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             R+ +L+ A   P+R ++V++     +V   + +++   ++
Sbjct: 173 AVRRAYLERADEAPERVYVVNADQPLDAVQDELKSLLDGCLE 214


>gi|157964834|ref|YP_001499658.1| thymidylate kinase [Rickettsia massiliae MTU5]
 gi|166987707|sp|A8F2H5|KTHY_RICM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157844610|gb|ABV85111.1| Thymidylate kinase [Rickettsia massiliae MTU5]
          Length = 203

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAIAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMS------NKFDIRGIDFYKKIYDCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|42521048|ref|NP_966963.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410789|gb|AAS14897.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 212

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++ +  + V +TREPGGT  AE  R VLL+  +D  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 77  S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 LV-EIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208
            +P RC ++      +   V   I++ +
Sbjct: 184 KEPVRCSVITGIETKNDNHVHNEIIDKI 211


>gi|34581335|ref|ZP_00142815.1| thymidylate kinase [Rickettsia sibirica 246]
 gi|28262720|gb|EAA26224.1| thymidylate kinase [Rickettsia sibirica 246]
          Length = 203

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMVRKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDIEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|229587042|ref|YP_002845543.1| thymidylate kinase [Rickettsia africae ESF-5]
 gi|259494279|sp|C3PLG0|KTHY_RICAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|228022092|gb|ACP53800.1| Thymidylate kinase [Rickettsia africae ESF-5]
          Length = 203

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPISELLQVMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|99034767|ref|ZP_01314692.1| hypothetical protein Wendoof_01000490 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 196

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++ +  + V +TREPGGT  AE  R VLL+  +D  
Sbjct: 1   MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 61  S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 118 LV-EIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167

Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208
            +P RC ++      +   V   I++ +
Sbjct: 168 KEPVRCSVITGIETKNDNHVHNEIIDKI 195


>gi|67458626|ref|YP_246250.1| thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|75536908|sp|Q4UMX3|KTHY_RICFE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|67004159|gb|AAY61085.1| Thymidylate kinase [Rickettsia felis URRWXCal2]
          Length = 206

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTAVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL +G I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMVRKIIPALQDGHIVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  ++RV  R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIERVNLRNMS------NKFDVRGIDFYKKIYDCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|293364068|ref|ZP_06610804.1| dTMP kinase [Mycoplasma alligatoris A21JP2]
 gi|292552558|gb|EFF41332.1| dTMP kinase [Mycoplasma alligatoris A21JP2]
          Length = 216

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 11/209 (5%)

Query: 5   LFISFEGIEGAGKTTHISL-LKRFLQRK-NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT I   L+  L++  N    +TREPGG     AE  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTIIEKFLENILEKFPNLKYVLTREPGGKDIVEAEKIREIILDKK-S 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  +  EA++++A+R  H+E+VI PAL    ++LCDR++DS YAYQG   S    +++ L
Sbjct: 60  QLSSVTEALLYSASRRIHLESVIWPALENNHLVLCDRYVDSFYAYQGYARSLGVEYVEEL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++ + + MPD TI  D+      KR      L      D  + +    H K    +L I
Sbjct: 120 TKLVIDKTMPDITIFFDINPADSKKR-----RLANRLVHDRMDDETEAFHNKVYGGYLKI 174

Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILNIV 208
              +  DR  IVD++ S   V   +   +
Sbjct: 175 IEKEKSDRFIIVDASKSIDEVLEQVNQKL 203


>gi|239948423|ref|ZP_04700176.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239922699|gb|EER22723.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 203

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTLVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +    K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMS------NKFDIRGIDFFIKIYDCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|32477522|ref|NP_870516.1| thymidylate kinase [Rhodopirellula baltica SH 1]
 gi|46576444|sp|Q7UIM1|KTHY_RHOBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|32448076|emb|CAD77593.1| thymidylate kinase [Rhodopirellula baltica SH 1]
          Length = 245

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ +GI+G GK++ I +L   L+ +  +V   R+PG T      R +LL   ++   
Sbjct: 48  GRLITLDGIDGVGKSSQIEILAERLRSEGRNVLCVRDPGSTDLGTKLRAMLLDSDLE-MH 106

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++F A+R + +E+ +R AL +G  ++ DRFL ++  YQ          L  L  +
Sbjct: 107 RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDAQTLWQLGRL 166

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V PD T++LDLP +I ++RV            D  E + V    K RQ FLD   N
Sbjct: 167 ACGGVQPDVTLLLDLPAEISMQRV--------GGEADRMESRGVDYMAKVRQAFLDELPN 218

Query: 184 QPDRCHIVDSAHSFQSVATNILNI 207
              R H++D++ + + VA  I  I
Sbjct: 219 AGGRTHVIDASGTIEEVAETIAAI 242


>gi|240142285|ref|YP_002966795.1| thymidylate kinase [Methylobacterium extorquens AM1]
 gi|240012229|gb|ACS43454.1| thymidylate kinase [Methylobacterium extorquens AM1]
          Length = 225

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 6/188 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+F S EG EGAGK++ I+ L   ++    +V VTREPGG   AE  R+++LS  V ++ 
Sbjct: 11  GVFASLEGPEGAGKSSQINRLAERMRAAGREVVVTREPGGCKGAEVLRNLVLSGAV-QWD 69

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E ++FAAAR +HV   I PAL  G ++L DRF +SS AYQG          D L+ I
Sbjct: 70  PRTELMLFAAARREHVVRTIAPALARGAVVLSDRFSESSRAYQGAARGVGTALCDDLERI 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   ++PD   +LD+   +GL R + R +         FE  D+  H   RQ FLD A  
Sbjct: 130 ACDGILPDVVFLLDVDPVVGLARSKARATDSTM-----FEALDLEFHRTLRQAFLDRAAE 184

Query: 184 QPDRCHIV 191
           +P+   ++
Sbjct: 185 RPELFEVI 192


>gi|121607993|ref|YP_995800.1| dTMP kinase [Verminephrobacter eiseniae EF01-2]
 gi|166223126|sp|A1WGM5|KTHY_VEREI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|121552633|gb|ABM56782.1| thymidylate kinase [Verminephrobacter eiseniae EF01-2]
          Length = 226

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 19/234 (8%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+  GLFISFEGI+GAGK++H+  L    + +   V V+REPGGTP AE  R +LL    
Sbjct: 1   MSRPGLFISFEGIDGAGKSSHVEGLAAAFRAQGRRVTVSREPGGTPLAEKLRALLL---A 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +   A  E+++  AAR DH+  VI PAL  G ++LCDRF DS++AYQG      H  L  
Sbjct: 58  ERMDALTESLLIFAARRDHLRQVIEPALARGDVVLCDRFTDSTFAYQGAGRGFDHETLSI 117

Query: 120 LQEIS------VQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           L+ ++         ++  P+ T+  DL  ++  +R+            D FE + V    
Sbjct: 118 LERMTNTAAAHKDGLLPEPELTLWFDLAPELAAERMAGAAH-----RPDRFEAQPVEFFR 172

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKRVSPLSSKK 223
           +  + + D A   P R   +D+A     V   + + +     +   V+P    +
Sbjct: 173 RVARGYADRAAAAPRRIVRIDAAQECHRVRQQLRDALVCKGWLAPMVTPQGGAQ 226


>gi|59798343|sp|Q73FS2|KTHY_WOLPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 196

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++ +  + V +TREPGGT  AE  R VLL+  +D  
Sbjct: 1   MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 61  S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 118 LV-EIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167

Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208
            +P RC ++      +   V   I++ +
Sbjct: 168 KEPVRCSVITGIETKNDNHVHNEIIDKI 195


>gi|238651001|ref|YP_002916857.1| thymidylate kinase [Rickettsia peacockii str. Rustic]
 gi|259494280|sp|C4K2K8|KTHY_RICPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|238625099|gb|ACR47805.1| thymidylate kinase [Rickettsia peacockii str. Rustic]
          Length = 203

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++     F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKTIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|288965848|pdb|3LD9|A Chain A, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
 gi|288965849|pdb|3LD9|B Chain B, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
 gi|288965850|pdb|3LD9|C Chain C, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
 gi|288965851|pdb|3LD9|D Chain D, Crystal Structure Of Thymidylate Kinase From Ehrlichia
           Chaffeensis At 2.15a Resolution
          Length = 223

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 21/213 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL  +L       +V +TREPGGT   E+ R++L        
Sbjct: 22  MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLF--KAQGL 79

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + +E + F A R +H   +I+P+LM+ KI++CDRF+DS+ AYQG         +D L +
Sbjct: 80  DSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLND 139

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + + +V PD T I+D+ ++  L R          +C + +E  D+  + + R  F DIA+
Sbjct: 140 LVI-DVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIAK 188

Query: 183 NQPDRCHIV-DSAHS-----FQSVATNILNIVW 209
             P RCH++ D + +        V   ++ ++ 
Sbjct: 189 KNPHRCHVITDKSETYDIDDINFVHLEVIKVLQ 221


>gi|225677081|ref|ZP_03788085.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590877|gb|EEH12100.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 212

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++ +  + V +TREPGGT  AE  R VLL+  +D  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG         +  L +
Sbjct: 77  S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIGDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   E  PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 LVEIEC-PDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208
            +P RC ++      +   V   I++ +
Sbjct: 184 KEPVRCSVITGIETKNDNHVHNEIIDKI 211


>gi|157804070|ref|YP_001492619.1| thymidylate kinase [Rickettsia canadensis str. McKiel]
 gi|166223111|sp|A8EZQ1|KTHY_RICCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157785333|gb|ABV73834.1| thymidylate kinase [Rickettsia canadensis str. McKiel]
          Length = 203

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 13/212 (6%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN+   G FI+FEG EG+GK+T   +L  +L+ +N  V +TRE GGT  +E  R +L+  
Sbjct: 1   MNNLTQGKFITFEGGEGSGKSTQSQMLYEYLKSQNTPVILTREVGGTIVSEKMREILVH- 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +E    +E +   AAR DH+   I P L EG I++CDRFLDS+  YQG    +    +
Sbjct: 60  --EELLPMSELLQAMAARYDHMVRKIIPVLKEGYIVICDRFLDSTACYQGLELENGIDLV 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +L +  +  +MPD T  +D+  D  +KRV  R         + F+ + +  + K    F
Sbjct: 118 YNLHKTLMPPLMPDITFFIDVEPDTAIKRVNLRNMS------NKFDIRGIDFYNKIYDCF 171

Query: 178 LDIARNQPDRCHIVDSA-HSFQSVATNILNIV 208
            +++   P R   + ++  S   V   I   +
Sbjct: 172 KELSNRFPARIKTIKASDLSMLEVHELIKKHL 203


>gi|15892970|ref|NP_360684.1| thymidylate kinase [Rickettsia conorii str. Malish 7]
 gi|23821795|sp|Q92GS5|KTHY_RICCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|15620166|gb|AAL03585.1| thymidylate kinase [Rickettsia conorii str. Malish 7]
          Length = 203

 Score =  208 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +LQ +N  V +TRE GGT  AE  R +L+    +
Sbjct: 4   LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +E +   AAR DH+   I PAL EG I++CDRF++S+  YQG    +    + +L
Sbjct: 61  ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIESTVCYQGLELENGIDLVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+  D  +KRV +R         + F+ + +  ++K    F ++
Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           +   P+R   + ++  S   V   I   +
Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203


>gi|157827624|ref|YP_001496688.1| thymidylate kinase [Rickettsia bellii OSU 85-389]
 gi|166223110|sp|A8GXQ1|KTHY_RICB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157802928|gb|ABV79651.1| thymidylate kinase [Rickettsia bellii OSU 85-389]
          Length = 206

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+     
Sbjct: 4   LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVH---T 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +E +   AAR DH+   I PAL  G I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  DLLPMSELLQAMAARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+   I ++R+ +R         + F+ + +  + K    F  +
Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERINSRNMS------NKFDVRGLDFYNKIYDCFKGL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           ++  P+R   + ++  + + V   I   +
Sbjct: 175 SKKFPERIVTIKASDLNPEQVHELIKKHL 203


>gi|15618193|ref|NP_224478.1| thymidylate kinase [Chlamydophila pneumoniae CWL029]
 gi|15835808|ref|NP_300332.1| thymidylate kinase [Chlamydophila pneumoniae J138]
 gi|16752765|ref|NP_445033.1| thymidylate kinase [Chlamydophila pneumoniae AR39]
 gi|33241615|ref|NP_876556.1| thymidylate kinase [Chlamydophila pneumoniae TW-183]
 gi|8134529|sp|Q9Z8R5|KTHY_CHLPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|4376546|gb|AAD18422.1| Thymidylate Kinase [Chlamydophila pneumoniae CWL029]
 gi|7189404|gb|AAF38316.1| thymidylate kinase [Chlamydophila pneumoniae AR39]
 gi|8978647|dbj|BAA98483.1| thymidylate kinase [Chlamydophila pneumoniae J138]
 gi|33236124|gb|AAP98213.1| dTMP kinase [Chlamydophila pneumoniae TW-183]
 gi|269303148|gb|ACZ33248.1| thymidylate kinase [Chlamydophila pneumoniae LPCoLN]
          Length = 206

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG EG+GK++    L   L  ++  V +TREPGG    E  R ++L     E   
Sbjct: 1   MFIVIEGGEGSGKSSLAKALGDQLVAQDRKVLLTREPGGCLIGERLRDLILEPPHLELSR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F  +R  H++ VI PAL +G I++C+RF DS+  YQG  +     F+  L    
Sbjct: 61  CCELFLFLGSRAQHIQEVIIPALRDGYIVICERFHDSTIVYQGIAEGLGADFVADLCSKV 120

Query: 125 VQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           V     +P+  ++LD+P DIGL+R             D FE+K +  H + R+ FL +A 
Sbjct: 121 VGPTPFLPNFVLLLDIPADIGLQRKH------RQKVFDKFEKKPLSYHNRIREGFLSLAS 174

Query: 183 NQPDRCHIVDSAHSFQSVATNIL 205
             P R  ++D+  S  S+   ++
Sbjct: 175 ADPSRYLVLDARESLASLIDKVM 197


>gi|168705271|ref|ZP_02737548.1| thymidylate kinase [Gemmata obscuriglobus UQM 2246]
          Length = 216

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 11/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    F+S +G++G GK+T   LL  +L  +   V    +PGGTP  +  R +LL     
Sbjct: 1   MPRPAFLSLDGLDGTGKSTQCRLLVEWLVAQGVPVTACTDPGGTPLGQELRKLLLFGREH 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G   EA++F A+R   VE VIRPAL  G++++ DRFL ++  YQG         L  +
Sbjct: 61  RIGTRTEALLFMASRAQLVEEVIRPALARGEVVVSDRFLLANVVYQGHAGGLSPEELWQV 120

Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              +      + PD T++LDLP +I         ++R +   D  E +     E+ R  F
Sbjct: 121 GTFATGGAERLEPDLTLVLDLPPEIA--------AVRRNREADRMEARGADYAERVRAGF 172

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                 + +R  +VD+  +   V   I   V  L++ R
Sbjct: 173 RSEVARRTERLRLVDATANVDGVQKIIRGEVAGLLRGR 210


>gi|225874540|ref|YP_002755999.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196]
 gi|225791865|gb|ACO31955.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196]
          Length = 219

 Score =  207 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 27/230 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G F++FEG++G+GK+T +  L ++L+ +   V VTR+PGGT   +  R +LL    +
Sbjct: 1   MRQGFFLTFEGLDGSGKSTQLRRLAQWLEARGESVVVTRQPGGTRIGDGIRALLLDSRTE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE     + R   +  VIRPAL  GKI+LCDR+ DS+ AYQG         + +L
Sbjct: 61  SISPMAELGFMFSDRAQSIAEVIRPALDAGKIVLCDRYTDSTEAYQGGGRQLGSELVRNL 120

Query: 121 QEISVQE------------VMPDCTIILDLPVDIGLKRVQNRYSL---RESACLDYFERK 165
            ++                                L+R + R      RE      FE++
Sbjct: 121 HQVMCGGLDPDLTLLLLPDF------------ARSLERARRRNGRVAAREGKDEGRFEQE 168

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           + + + +    + +IAR +P R   ++S    +S+  +I++IV E + +R
Sbjct: 169 NEIFYRRVFDQYGEIARREPLRVVAIESDEGIESIHQHIVHIVEERLARR 218


>gi|327543342|gb|EGF29771.1| thymidylate kinase [Rhodopirellula baltica WH47]
          Length = 225

 Score =  207 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 9/204 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ +GI+G GK++ I +L   L+ +   V   R+PG T      R +LL   ++   
Sbjct: 24  GRLITLDGIDGVGKSSQIEILAERLRSEGRQVLCVRDPGSTDLGTKLRAMLLDSDLE-MH 82

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA++F A+R + +E+ +R AL +G  ++ DRFL ++  YQ          L  L  +
Sbjct: 83  RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDAQTLWQLGRL 142

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +   V PD T++LDLP +I ++RV            D  E + V    K RQ FLD   N
Sbjct: 143 ACGGVQPDVTLLLDLPAEISMQRV--------GGEADRMESRGVDYMAKVRQAFLDELPN 194

Query: 184 QPDRCHIVDSAHSFQSVATNILNI 207
              R H++D++ + + VA  I  I
Sbjct: 195 AGGRTHVIDASGTIEEVAETIAAI 218


>gi|198283696|ref|YP_002220017.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667539|ref|YP_002426325.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248217|gb|ACH83810.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519752|gb|ACK80338.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 214

 Score =  207 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 8/203 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SG F++ EGIEGAGK++ + +L     ++ Y V VTREPGG P  EA R + L   +  
Sbjct: 7   KSGFFLTLEGIEGAGKSSALPVLAELCHQQGYAVEVTREPGGGPLGEALRTIFLDDSLHL 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   +++ A R +H    I PAL  GK+++ DR+ DS+YAYQ          + +L 
Sbjct: 67  DADEELLLLY-AGRRNHWRTRIAPALAAGKVVISDRYEDSTYAYQSGGRGVPPAHIAALA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     PD T   D+  ++G  R++ R         D  E++D     + R +F +  
Sbjct: 126 RWAGITRRPDLTFWFDIAPELGAARIRMR-------RPDRLEQEDQAFFRRARAVFAERC 178

Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204
             +P R   VD++     V   +
Sbjct: 179 AAEPQRIWRVDASLPLAMVHDAV 201


>gi|33860690|ref|NP_892251.1| thymidylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|46576452|sp|Q7V3E6|KTHY_PROMP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|33633632|emb|CAE18589.1| Thymidylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 214

 Score =  207 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 15/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
            G FI  EGI+G GKTT I  + ++     L R    +  TREPGG+   +  R+++L  
Sbjct: 2   RGKFIVIEGIDGCGKTTQIDEISKWIPTSGLLRGKQKLVKTREPGGSLLGKKIRNLILDN 61

Query: 58  G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++  + AE ++++A R +H+   I PAL     +L DRF DS+ AYQG   +     
Sbjct: 62  HKDNKPSSLAELLLYSADRAEHISKTISPALENQDWVLSDRFCDSTLAYQGYGRNINLEI 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + +++ I  Q   PD TI L++  +  + R       RE    D  E + +   EK  + 
Sbjct: 122 IKNIESIVCQGESPDLTIFLEISAEESVLR-------REKFIPDRMESEGIKFLEKVNEG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           F  IA+        + +     ++   I   + +
Sbjct: 175 FKLIAKE--KNWTTISALQDINTITNEIKETLLK 206


>gi|294155947|ref|YP_003560331.1| dTMP kinase [Mycoplasma crocodyli MP145]
 gi|291600094|gb|ADE19590.1| dTMP kinase [Mycoplasma crocodyli MP145]
          Length = 220

 Score =  207 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 11/211 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT I  +   L +K       +TREPGG     AE  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTVIEKVTELLHKKFPELKYILTREPGGKDIVEAERIREIILDKS-S 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA++++A+R  H+E+VI P+L E K++LCDRF+DS YAYQG        F  SL
Sbjct: 60  KISPVTEALLYSASRRIHLEHVIWPSLKEKKLVLCDRFIDSFYAYQGYARELGIDFATSL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E+ +   +PD TI  D+      KR      L      D  + +  + H K    +L I
Sbjct: 120 TELIIDNTIPDLTIFFDINPADSKKR-----RLANRLVHDRMDDETEIFHNKVYDGYLKI 174

Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILNIVWE 210
                 +R  IVD++ SF  V   ++  + E
Sbjct: 175 IDKDKNNRFIIVDASKSFDEVVEQVIQKLME 205


>gi|91205052|ref|YP_537407.1| thymidylate kinase [Rickettsia bellii RML369-C]
 gi|122425994|sp|Q1RJZ6|KTHY_RICBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|91068596|gb|ABE04318.1| Thymidylate kinase [Rickettsia bellii RML369-C]
          Length = 206

 Score =  207 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI+FEG EG GK+T   +L  +L+ +N  V +TRE GGT  AE  R +L+     
Sbjct: 4   LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVH---T 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +E +   AAR DH+   I PAL  G I++CDRF+DS+  YQG    +    + +L
Sbjct: 61  DLLPMSELLQAMAARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +MPD T  +D+   I ++RV +R         + F+ + +  + K    F  +
Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERVNSRNMS------NKFDVRGLDFYNKIYDCFKGL 174

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           ++  P+R   + ++  + + V   I   +
Sbjct: 175 SKKFPERIVTIKASDLNPEQVHELIKKHL 203


>gi|21227213|ref|NP_633135.1| thymidylate kinase [Methanosarcina mazei Go1]
 gi|23821771|sp|Q8PXV5|KTHY_METMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|20905554|gb|AAM30807.1| Thymidylate kinase [Methanosarcina mazei Go1]
          Length = 206

 Score =  207 bits (528), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 13/214 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+ EGI+G+GK+T    ++   + + +D   TREP        A    +    D+ 
Sbjct: 2   RGKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAIQSETDQL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQ 121
              AE  +F A   +H+  +++PAL  GK ++ DR+ DS YAYQG    S+    L+ ++
Sbjct: 62  ---AELFLFTADHAEHLAKLVKPALANGKNVISDRYSDSRYAYQGVTLKSRFENPLEWVR 118

Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +     V+PD T + D+  +I ++R   R           FE+  +   +  R+ FL +
Sbjct: 119 SLHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQT------KFEK--IEFLQNVRENFLIL 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A   P R  ++D++   + V   ++  V E +Q+
Sbjct: 171 AAEDPGRFVVIDASRPQEEVEKKVIKKVLEFIQR 204


>gi|240047504|ref|YP_002960892.1| Thymidylate kinase [Mycoplasma conjunctivae HRC/581]
 gi|239985076|emb|CAT05069.1| Thymidylate kinase [Mycoplasma conjunctivae]
          Length = 209

 Score =  207 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 9/212 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEGI+G GKTT ++L  ++LQ+K    ++ VTREPGGT    AE  R + L    D
Sbjct: 1   MFITFEGIDGCGKTTVLNLFAKYLQKKFPTREIIVTREPGGTGVVEAEKVREIALDRNHD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +E ++ A +R  H+E +I PAL E KI+LCDR++DSS AYQG         +  +
Sbjct: 61  -ISPYSEMLLMATSRRMHLEKLIWPALKENKIILCDRYIDSSIAYQGFGLQLGEQLVSMV 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +      PD T  +D+   +  +R+    + +     D  E +    + +  + F  +
Sbjct: 120 NNLISNNTKPDITFFIDVEPKVAFERMSQIINHKR----DRLEIRGRQFYLRVIEGFNFV 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A+ +P+    +   +  + V  N++N+  + +
Sbjct: 176 AKQRPNNFFKISGNNQPEEVLANVINVFEKFL 207


>gi|159184784|ref|NP_354504.2| thymydilate kinase [Agrobacterium tumefaciens str. C58]
 gi|159140072|gb|AAK87289.2| thymydilate kinase [Agrobacterium tumefaciens str. C58]
          Length = 188

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 2/179 (1%)

Query: 36  HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
            VTREPGG+P AEA RHV+LS   + FG   EAI+FAAAR DHVE VIRPAL  G+I+LC
Sbjct: 2   VVTREPGGSPGAEAVRHVILSGAAESFGVRMEAILFAAARNDHVEEVIRPALARGEIVLC 61

Query: 96  DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           DRFLDSS  YQG   + +  F+++LQ I++  V+P+ T+I D+  + GL R + R    E
Sbjct: 62  DRFLDSSRVYQGTTGNLEPDFIETLQRIAIDGVVPELTLIFDIAAEKGLARARKR--ADE 119

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            A  D FE++++  HEKRR+ +LDIA  +P RC IV++      V  ++++ V  L+++
Sbjct: 120 GATPDRFEKEEIETHEKRREAYLDIALAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 178


>gi|159902685|ref|YP_001550029.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9211]
 gi|238687123|sp|A9BCY7|KTHY_PROM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|159887861|gb|ABX08075.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9211]
          Length = 215

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
            G FI  EGI+G GK+T IS + ++L +        ++++TREPGGT   ++ R +LL  
Sbjct: 2   KGHFIVLEGIDGCGKSTQISHISKWLPQSGLMPKNANLYITREPGGTTLGKSLRDLLLHE 61

Query: 58  GVDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                     E +++AA R +H+ ++I+P L +G  ++ DRF  S+ AYQG         
Sbjct: 62  HETNVPAPLTELLLYAADRAEHIHSLIQPKLDKGDWVISDRFSGSTLAYQGFGRGLDINL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L  I+ Q ++P+ TI L + V   ++R       R     D  E +     +K    
Sbjct: 122 IRRLDAIARQGLVPEITIFLKISVLTSMRR-------RAKKSADRMEAEGEGFLKKVASG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           F  IA  +      ++       V+  I   +   ++  +S
Sbjct: 175 FSRIANEEH--WITIEGEQDQALVSDEIKLAITNKLKNYIS 213


>gi|330877896|gb|EGH12045.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 172

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 6/176 (3%)

Query: 40  EPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99
           EPGGTP AE  R +LL+   +   A+ E ++  AAR  H+  VIRPAL  G+++LCDRF 
Sbjct: 1   EPGGTPLAERIRELLLAPSDEAMSADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFT 60

Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           D++YAYQG         +  L+E    ++ PD T++ DLPV+IGL R   R        L
Sbjct: 61  DATYAYQGGGRGLSQQRIAVLEEFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 114

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           D FE++     +  R  +L  A+  P R  +VD+A     V  ++  ++ +L++ R
Sbjct: 115 DRFEQEGRAFFDAVRSTYLQRAKADPARYRLVDAAQPLADVQASLDTLLPQLLELR 170


>gi|58697581|ref|ZP_00372803.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans]
 gi|58535919|gb|EAL59679.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans]
          Length = 197

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 15/189 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL    ++ + +  V +TREPGGT  AE  R VLL    +  
Sbjct: 17  MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLL---TNNI 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +H++ +I PAL EGKI++CDRF+DS+ AYQG   S     +  L +
Sbjct: 74  DPISELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD T ILD+ V +GL R +++         + +E  DV  + K R+ F +IA 
Sbjct: 134 LV-EIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183

Query: 183 NQPDRCHIV 191
            +P RC ++
Sbjct: 184 KEPVRCSVI 192


>gi|206973280|ref|ZP_03234202.1| thymidylate kinase [Bacillus cereus AH1134]
 gi|206732164|gb|EDZ49364.1| thymidylate kinase [Bacillus cereus AH1134]
          Length = 205

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 4/198 (2%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G  KTT ++LL  +L++++ DV +T+EPGGT   E  R +L++    +    +E  +F A
Sbjct: 5   GFWKTTQLNLLHSYLKKRSIDVILTKEPGGTVIGEKLRELLVNNLEIKLERLSELFLFEA 64

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R + ++ +++P +  GK ++ DR +D S AYQG         +D L  ++ +   PD T
Sbjct: 65  DRHETIKKIVKPNIKAGKFVISDRGIDGSVAYQGFGREIDLEVIDYLTSLATENKQPDLT 124

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I++D+  +I  +R+ NR ++     +D F+ + +      R+ FL +A+  P R   VD 
Sbjct: 125 ILIDIDPEIAQQRIANRNNVD----IDKFDLEQLQFQANVRKGFLYMAKQNPKRIVTVDG 180

Query: 194 AHSFQSVATNILNIVWEL 211
             + + +   I+ ++ + 
Sbjct: 181 TLAIEDLHQKIVTLIKDF 198


>gi|189219648|ref|YP_001940289.1| Thymidylate kinase [Methylacidiphilum infernorum V4]
 gi|189186506|gb|ACD83691.1| Thymidylate kinase [Methylacidiphilum infernorum V4]
          Length = 225

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 3/211 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FISFEG EG GKTT I LLK+ L+     V + REPG T   E  R +L    +  +
Sbjct: 17  KARFISFEGSEGCGKTTQIRLLKKRLEDHGQKVVIVREPGTTKLGEKLRRILKHSSLSLY 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E  +F A+R++  + VI P + +   +L DRF+DS+  YQG         ++ L E
Sbjct: 77  -PLTELFLFEASRVELTKRVIEPEMAKNSWILADRFVDSTLVYQGIIRGIPLKTIEELNE 135

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++   + P  TI+LD+P      R++ R    +    D  + +     E+ RQ +L++A+
Sbjct: 136 LASSGIKPTLTILLDIPHQCSRSRIKKR--DHKKTITDRLQDEFEKSLEQIRQAYLELAQ 193

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +P R +IV    S Q ++  I   V  + +
Sbjct: 194 REPHRFYIVKGTDSPQFISALIWEKVENVFK 224


>gi|283779876|ref|YP_003370631.1| thymidylate kinase [Pirellula staleyi DSM 6068]
 gi|283438329|gb|ADB16771.1| thymidylate kinase [Pirellula staleyi DSM 6068]
          Length = 207

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+SF+G++GAGK+T I LL  +L  ++ +V V R+PGGTP  E  R +LL         
Sbjct: 1   MFLSFDGVDGAGKSTQIRLLAEWLAARSLEVVVCRDPGGTPLGEKLRSILLDDHETPIHR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +E ++F A+R   VE VIRPAL  GK+++ DRFL ++  YQ          + ++ +++
Sbjct: 61  RSEMLLFMASRAQLVEEVIRPALEAGKVVISDRFLLATAVYQAHAGGLVADDVWTVGKVA 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           V  +MP   ++LD+P     KR+            D  E + +   E+ RQ FL  A   
Sbjct: 121 VGGMMPARVLLLDMPAAEASKRIA--------RAHDRMESQGLAYLERVRQGFLLEAERD 172

Query: 185 PDRCHIVDSAHSFQ 198
           P     +D+A   Q
Sbjct: 173 PQTIRAIDAARDPQ 186


>gi|68171235|ref|ZP_00544639.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88658326|ref|YP_507050.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas]
 gi|123493813|sp|Q2GHN3|KTHY_EHRCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|67999355|gb|EAM86000.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599783|gb|ABD45252.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas]
          Length = 202

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 21/213 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL  +L       +V +TREPGGT   E+ R++L        
Sbjct: 1   MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLF--KAQGL 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + +E + F A R +H   +I+P+LM+ KI++CDRF+DS+ AYQG         +D L +
Sbjct: 59  DSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLND 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + + +V PD T I+D+ ++  L R          +C + +E  D+  + + R  F DIA+
Sbjct: 119 LVI-DVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIAK 167

Query: 183 NQPDRCHIV-DSAHS-----FQSVATNILNIVW 209
             P RCH++ D + +        V   ++ ++ 
Sbjct: 168 KNPHRCHVITDKSETYDIDDINFVHLEVIKVLQ 200


>gi|296284126|ref|ZP_06862124.1| thymidylate kinase [Citromicrobium bathyomarinum JL354]
          Length = 215

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 108/210 (51%), Gaps = 5/210 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+FEG EG GK+T    L   L     D  +TREPGGT  AE  R +LL      +
Sbjct: 7   KARFIAFEGGEGVGKSTQAKRLVEALSNHGIDALLTREPGGTTGAEMIRKLLLEPPGTGW 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AEA++FAAAR DHV   I+PALM G+ ++CDRF+ SS AYQG         + +L +
Sbjct: 67  RVQAEALLFAAARSDHVAKAIKPALMAGRWVVCDRFVLSSRAYQGLAGGLGDEEVRTLHQ 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I    + P  TI+L+ P D   +R++ R    +    D    ++   H    + F  +A+
Sbjct: 127 IGSGGLQPCRTILLEAPGDDVAERLRKR----DGGEADAIGGRNARYHADVARGFAGLAQ 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  D    +D++ S  +V   ++  +  L+
Sbjct: 183 DD-DTIVQIDASGSADAVHEAVMRELAPLL 211


>gi|87301810|ref|ZP_01084644.1| Thymidylate kinase [Synechococcus sp. WH 5701]
 gi|87283378|gb|EAQ75333.1| Thymidylate kinase [Synechococcus sp. WH 5701]
          Length = 224

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 17/215 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57
            G F+  EGI+G+GK++ +  L  +L R         +  +REPGGTP  +  R +LL  
Sbjct: 8   RGRFLVLEGIDGSGKSSQLERLAAWLPRSGLMPAGASLVTSREPGGTPLGQGLRQLLLHP 67

Query: 58  GVDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +    A AE +++AA R  HV+++I PAL  G  +L DRF  S+ AYQG         
Sbjct: 68  PEEAAPVARAELLLYAADRAQHVQSLIEPALAAGHWVLSDRFAGSTAAYQGHGRGLSLDL 127

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +D L+ I+   + PD T+ LDLP+ I   R  +R +       D  E   +   E+    
Sbjct: 128 IDQLEAIATGGLSPDLTLWLDLPLAISADRRGHRGA-------DRIEAAGLPFLERVSDG 180

Query: 177 FLDIARNQPDR-CHIVDSAHSFQSVATNILNIVWE 210
           F  +A    +R    VD+A S   V + +   + E
Sbjct: 181 FAQLAA---ERGWSRVDAAGSPAEVESALRAALLE 212


>gi|284161466|ref|YP_003400089.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
 gi|284011463|gb|ADB57416.1| thymidylate kinase [Archaeoglobus profundus DSM 5631]
          Length = 199

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 19/210 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G+GKTT +  L   L+++ YDV   +EP  +   +  R +L      +   
Sbjct: 1   MLIAVEGIDGSGKTTIVRFLVEELKKRGYDVVAFKEPTDSEYGKKIRQILK---ERKISP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  +F   R  +V N I PAL  GK+++ DR+  S+ AYQG         + +L E  
Sbjct: 58  EEELKLFIKDREFNVRNNILPALKSGKVVIMDRYYYSTIAYQGA-LGLDIGKIKTLNE-- 114

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q   PD  IILD+  +  LKR++ +         D FE  D+    K R IFL +    
Sbjct: 115 -QFPKPDLVIILDVSPETALKRIKAK------RKPDRFE--DLEYLRKVRNIFLSL---- 161

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +   ++D+    + V  ++L +V E ++K
Sbjct: 162 KNNIVVIDAERDIEEVKRDVLKVVLEHLEK 191


>gi|319760533|ref|YP_004124471.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039247|gb|ADV33797.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF]
          Length = 211

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 10/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59
           MN+  FI  EG++G+GKTT +S + ++    N    +   EPGGT  +++ R ++ +  +
Sbjct: 1   MNN-KFIVVEGLDGSGKTTIVSKIVQYFNNNNITNLITVHEPGGTKISDSLRFLIKNGAI 59

Query: 60  DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           DE      E ++  AAR   +EN+++PAL +G  ++ DRF  SS+AYQG        FL 
Sbjct: 60  DESITNMTEVLMLYAARSQLLENIVKPALTKGDWVIGDRFDLSSFAYQGGGRGVDEFFLY 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L +  +  + P     LD+  +I L RV+NR        LD  E++ +    K R+ + 
Sbjct: 120 LLSKSVINNLFPHLIFYLDIAPEISLLRVKNR------DKLDRIEKEPLSFFYKVREYYK 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +A  Q +    +++  S + V+ +I   +   +
Sbjct: 174 KVAAIQKN-IITINANQSLEIVSRSIYQYLDVWL 206


>gi|72383332|ref|YP_292687.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A]
 gi|123620515|sp|Q46HP4|KTHY_PROMT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72003182|gb|AAZ58984.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A]
          Length = 211

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 15/219 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
            G FI FEGI+G+GKTT I+ L ++L       +N  + +TREPGGT   ++ R +LL  
Sbjct: 2   KGKFIVFEGIDGSGKTTQINQLSKWLISSDLIPENNKLVITREPGGTKLGKSIRSLLLDT 61

Query: 58  GVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            +++   +  E +++AA R  H+  +IRP L +G  ++ DRF  S+ AYQG         
Sbjct: 62  SIEKSPDSITELLLYAADRSQHINEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDINL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+ Q + PD T +LD+P++  +         R +   D  E++           
Sbjct: 122 IKDLEAIATQGIAPDITFLLDIPIEESI-------RRRRNRKDDRIEKEGREFLSNVSLG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           F  ++  +      + +  S + + + I + + +L++ +
Sbjct: 175 FQALS--EDSNWKKISAIDSKEKIISEIKSEIKKLIKNK 211


>gi|320102453|ref|YP_004178044.1| thymidylate kinase [Isosphaera pallida ATCC 43644]
 gi|319749735|gb|ADV61495.1| thymidylate kinase [Isosphaera pallida ATCC 43644]
          Length = 224

 Score =  205 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G FI  EG +G+GK+T  SLL ++L+     +   R+PGGT   +  R +LL       
Sbjct: 12  AGRFIVLEGPDGSGKSTQASLLAQWLRDAGVPLTTCRDPGGTRLGDRLRSILLDRHDCAI 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +++ A R   V   IRPAL +G  +L DRFL S++ YQ             + E
Sbjct: 72  DMTTELLLYMAGRAQLVRERIRPALDQGHWVLSDRFLMSNWVYQCFAGGVDDRVFHQVAE 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V   +PD T++LDL ++  L R             D  E +     ++ RQ FL+ ++
Sbjct: 132 VAVGSTLPDLTLVLDLELETALART--------GGARDRIEDRSWEYRQRVRQGFLEASK 183

Query: 183 N----QPD-RCHIVDSAHSFQSVATNILNIVWELV 212
                +P+    ++D++     + T + + V   +
Sbjct: 184 RRIAVKPEGEVRVLDASPCPDILLTRLQHEVRHAL 218


>gi|124024915|ref|YP_001014031.1| thymidylate kinase [Prochlorococcus marinus str. NATL1A]
 gi|166223099|sp|A2BZV6|KTHY_PROM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123959983|gb|ABM74766.1| Thymidylate kinase [Prochlorococcus marinus str. NATL1A]
          Length = 211

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 15/219 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57
            G FI FEGI+G+GKTT I+ L ++L       +N  + +TREPGGT   ++ R +LL  
Sbjct: 2   KGKFIVFEGIDGSGKTTQINQLSKWLISTDLIPENNKLVITREPGGTQLGKSIRSLLLDT 61

Query: 58  GVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            +++   +  E +++AA R  HV  +IRP L +G  ++ DRF  S+ AYQG         
Sbjct: 62  SIEKSPDSITELLLYAADRSQHVNEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDITL 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+ I+ Q + PD T +LD+P++  +         R +   D  E++           
Sbjct: 122 IKDLEAIATQGIAPDITFLLDIPIEESI-------RRRRNRKDDRIEKEGREFLSNVSLG 174

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           F  ++  +      + +  S + + + I + + +L++ +
Sbjct: 175 FQALS--EDSHWKKISAIDSKEKIISEIKSEIKKLIKNK 211


>gi|313678822|ref|YP_004056562.1| dTMP kinase [Mycoplasma bovis PG45]
 gi|312950663|gb|ADR25258.1| dTMP kinase [Mycoplasma bovis PG45]
          Length = 215

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 10/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT +  L   L  +  N    VTREPGG     +E  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTIVQKLVDKLLEQKPNLSFIVTREPGGKNVRESEKIRELILD-KES 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA+++ A+R  H+E VI PAL E K++LCDR++DS YAYQG        F   L
Sbjct: 60  HLSPIAEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E+ ++  +PD TI +D+  +    R   R   R  +  D  + + +  H K    + ++
Sbjct: 120 TEMVIENTVPDITIYIDITAEQSEYR---RNVSRLIS--DRLDSESLEFHRKVFDAYREV 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               P+R  +++   S   +   ++  +++
Sbjct: 175 ISLNPERFVVINGLQSIPEILDEVITKLFQ 204


>gi|56416439|ref|YP_153513.1| thymidylate kinase [Anaplasma marginale str. St. Maries]
 gi|81599204|sp|Q5PBS1|KTHY_ANAMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56387671|gb|AAV86258.1| thymidylate kinase [Anaplasma marginale str. St. Maries]
          Length = 211

 Score =  204 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 17/218 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G GKTT   LL ++L      + V +TREPGGT   E  R  LL     + 
Sbjct: 1   MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GKI++ DRF DS+ AYQG         +  L  
Sbjct: 61  DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   +V+PD T ++D  +++ L R            L+ FE      +++ R+ F  I  
Sbjct: 121 LVA-DVVPDITFVIDASIELALART----------SLNGFENHGPEFYDRVREGFRTIVA 169

Query: 183 NQPDRCHIVDS-AHSFQSV---ATNILNIVWELVQKRV 216
           N P RCH++D  + + + V      I+ +   + Q ++
Sbjct: 170 NNPHRCHMIDCKSDAAEDVYSTHDRIVALFRAITQDKL 207


>gi|262366245|gb|ACY62802.1| thymidylate kinase [Yersinia pestis D182038]
          Length = 190

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 9/190 (4%)

Query: 28  LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85
           L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VENVI+P
Sbjct: 5   LRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 64

Query: 86  ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145
           AL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL 
Sbjct: 65  ALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLA 124

Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205
           R + R        LD  E++ +   E+ R  +L++A +       +D++   + V+ +I 
Sbjct: 125 RARAR------GELDRIEQESLAFFERTRARYLELAASDAS-IKTIDASQPIEQVSASIS 177

Query: 206 NIVWELVQKR 215
             + + +  +
Sbjct: 178 QALAQWLTNQ 187


>gi|222474809|ref|YP_002563224.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida]
 gi|255002779|ref|ZP_05277743.1| thymidylate kinase [Anaplasma marginale str. Puerto Rico]
 gi|255003913|ref|ZP_05278714.1| thymidylate kinase [Anaplasma marginale str. Virginia]
 gi|254808273|sp|B9KHK6|KTHY_ANAMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|222418945|gb|ACM48968.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida]
          Length = 211

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 17/218 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G GKTT   LL ++L      + V +TREPGGT   E  R  LL     + 
Sbjct: 1   MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GKI++ DRF DS+ AYQG         +  L  
Sbjct: 61  DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   +V+PD T ++D  +++ L R            L+ FE      +++ R+ F  I  
Sbjct: 121 LVA-DVVPDITFVIDASIELALART----------SLNGFENHGPEFYDRVREGFRTIVA 169

Query: 183 NQPDRCHIVDS-AHSFQSV---ATNILNIVWELVQKRV 216
           N P RCH++D  + + + V      I+ +   + + ++
Sbjct: 170 NNPHRCHMIDCKSDAAEDVYSTHDRIVALFRAITKDKL 207


>gi|238749664|ref|ZP_04611169.1| Thymidylate kinase [Yersinia rohdei ATCC 43380]
 gi|238712319|gb|EEQ04532.1| Thymidylate kinase [Yersinia rohdei ATCC 43380]
          Length = 191

 Score =  204 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 9/189 (4%)

Query: 28  LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85
           L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VENVI+P
Sbjct: 5   LRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 64

Query: 86  ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145
           AL  G  ++ DR   SS AYQG         + SL++  + +  PD T+ LDLP  +GL 
Sbjct: 65  ALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGDFRPDLTLYLDLPPAVGLA 124

Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205
           R + R        LD  E++ +   E+ R  +L++A         VD++   + V+ +I 
Sbjct: 125 RARAR------GELDRIEQESLAFFERTRARYLELAAAD-STIKTVDASQPLEQVSESIR 177

Query: 206 NIVWELVQK 214
            ++ + + +
Sbjct: 178 QVLQQWLAR 186


>gi|73668631|ref|YP_304646.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
 gi|121722245|sp|Q46DH6|KTHY_METBF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|72395793|gb|AAZ70066.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro]
          Length = 205

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 15/215 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I+ EGI+G+GK+T    L++  + K +    TREP  GT   +A    + S    +
Sbjct: 2   RGKLITLEGIDGSGKSTVAEKLQKNPEIKAFKPVFTREPTRGTLTGDAVEKAIQS----D 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSL 120
               AE  +F A   +H+  +I+PAL  GKI++ DR+ DS YAYQG    ++    L+ +
Sbjct: 58  TDQFAELFLFTADHAEHLAKLIKPALENGKIVISDRYSDSRYAYQGITLKTRLENPLEWV 117

Query: 121 QEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +++     ++PD T + D+  +I ++R   R           FE+  +   +  R IFL 
Sbjct: 118 KDLHRSWTIVPDLTFLFDIRPEISIERCGKRGEQS------KFEK--LEFLQGVRAIFLK 169

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +A + P+R  ++D++ S + +   ++  + E + +
Sbjct: 170 LAADDPERFVVIDASRSPEYIEKEVVKKILEFLSR 204


>gi|226330525|ref|ZP_03806043.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198]
 gi|225201320|gb|EEG83674.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198]
          Length = 207

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 17  KTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAA 74
           KT+ I  +   L+ K   ++  TREPGGTP AE  R ++      ++   +AE ++  AA
Sbjct: 9   KTSAIQTVIDTLKDKGITNLAFTREPGGTPLAEKLRELIKQGIEGEKVTDKAELLMLYAA 68

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTI 134
           R+  +ENVI+PAL EGK ++ DR   SS AYQG         + SL+   +    PD T+
Sbjct: 69  RVQLIENVIKPALAEGKWVIGDRHDLSSQAYQGGGRGLDKDLMLSLRNTVLGNFRPDLTL 128

Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
            LDL   IGL R + R        LD  E++ +    + R+ +  +A++  D    +D++
Sbjct: 129 YLDLDPAIGLTRARAR------GELDRIEKESMDFFYRTRERYQALAKDD-DTIITIDAS 181

Query: 195 HSFQSVATNILNIVWELVQKRVSP 218
            +   V  +I  I+   + ++ + 
Sbjct: 182 QAIDKVQADIRQILTAWLVQQENK 205


>gi|239815834|ref|YP_002944744.1| thymidylate kinase [Variovorax paradoxus S110]
 gi|239802411|gb|ACS19478.1| thymidylate kinase [Variovorax paradoxus S110]
          Length = 220

 Score =  204 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 16/215 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ GLF++ EGI+GAGK++H+  ++   + +   V  TREPGGTP AE  R ++L     
Sbjct: 1   MSEGLFLTLEGIDGAGKSSHLDAMEALFKARGRTVVRTREPGGTPLAETLRGLVL---EQ 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E+++  AAR DH+  VI PAL  G ++LCDRF D+++AYQG         L +L
Sbjct: 58  AMDPLTESLLVFAARRDHIVQVIEPALARGDVVLCDRFTDATFAYQGAGRDFDTQLLSTL 117

Query: 121 QEISVQE-------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           ++            + P  T+  DL  +I  +R+        +   D FE + V    + 
Sbjct: 118 EQWVQGGRGAAGQLLQPHITLWFDLAPEIAAERLAG------ARLPDKFESQPVEFFRRV 171

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +   A     R   +D++ +   V   +   +
Sbjct: 172 AAGYAARAAADAQRFVRIDASQTRDQVWQQVETAL 206


>gi|161869607|ref|YP_001598774.1| thymidylate kinase [Neisseria meningitidis 053442]
 gi|161595160|gb|ABX72820.1| thymidylate kinase [Neisseria meningitidis 053442]
          Length = 173

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 7/173 (4%)

Query: 36  HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
             TREPGGTP  EA R +LL+      G  AE ++  AAR+ H+E+VI PAL +G  ++ 
Sbjct: 2   LFTREPGGTPVGEALREILLNPETKA-GLRAETLMMFAARMQHIEDVILPALSDGIHVVS 60

Query: 96  DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           DRF D+++AYQG         ++ L+      + PD T++LD+P+++ + R+        
Sbjct: 61  DRFTDATFAYQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQ------ 114

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +   D FE++      + R ++L+ A   P+R  I+DS  S   V  +I  ++
Sbjct: 115 TREKDRFEQEQADFFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNSIEKVL 167


>gi|56751420|ref|YP_172121.1| thymidylate kinase [Synechococcus elongatus PCC 6301]
 gi|56686379|dbj|BAD79601.1| thymidylate kinase [Synechococcus elongatus PCC 6301]
          Length = 177

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 8/178 (4%)

Query: 35  VHVTREPGGTPAAEAARHVLL--SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92
           +  TREPG T   +A R +LL            AE +++AA R  HVE V+RP L  G +
Sbjct: 2   IVATREPGDTALGQALRSLLLTQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAV 61

Query: 93  LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           ++CDR++DS+ AYQG         +  L  ++   +  D T+ LDLPV I  +R Q R  
Sbjct: 62  VVCDRYVDSTVAYQGYGRGLDQSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQAR-- 119

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                  D  E   +   E+ RQ F  IA  +PDR   +D+A     VA  I  +V +
Sbjct: 120 ----GQGDRMEAAGLAFQERLRQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVVQQ 173


>gi|254994671|ref|ZP_05276861.1| thymidylate kinase [Anaplasma marginale str. Mississippi]
          Length = 211

 Score =  202 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 17/218 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +F++FEGI+G GKTT   LL ++L      + V +TREPGGT   E  R  LL     + 
Sbjct: 1   MFVTFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++F A R +    V+ P L+ GKI++ DRF DS+ AYQG         +  L  
Sbjct: 61  DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +   +V+PD T ++D  +++ L R            L+ FE      +++ R+ F  I  
Sbjct: 121 LVA-DVVPDITFVIDASIELALART----------SLNGFENHGPEFYDRVREGFRTIVA 169

Query: 183 NQPDRCHIVDS-AHSFQSV---ATNILNIVWELVQKRV 216
           N P RCH++D  + + + V      I+ +   + + ++
Sbjct: 170 NNPHRCHMIDCKSDAAEDVYSTHDRIVALFRAITKDKL 207


>gi|254430315|ref|ZP_05044018.1| thymidylate kinase [Cyanobium sp. PCC 7001]
 gi|197624768|gb|EDY37327.1| thymidylate kinase [Cyanobium sp. PCC 7001]
          Length = 213

 Score =  202 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 19/215 (8%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSC-GV 59
             EGI+G GKTT +  L R+L+         +  + VTREPGGTP   A R +LL   G 
Sbjct: 2   VLEGIDGCGKTTQLQALSRWLESSEAGCLPPDRQLIVTREPGGTPLGRALRELLLHPPGG 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              G  AE +++AA R  HVE+ IRPAL  G  +L DRF  S+ AYQG         +  
Sbjct: 62  AAPGTTAELLLYAADRAQHVEHTIRPALAAGHWVLSDRFSGSTAAYQGHGRGLDLDLIQQ 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+ ++   + PD T+ LDLP++  L         R     D  E       E+    F  
Sbjct: 122 LEAVATAGLQPDLTLWLDLPLEDSL-------RRRGGRAADRIEAAGAGFLERVAGGFAS 174

Query: 180 IARNQPDR-CHIVDSAHSFQSVATNILNIVWELVQ 213
           +A    +R    +D+      V     + +  L Q
Sbjct: 175 LAE---ERGWLRIDATAPADRVTAACRDALLGLAQ 206


>gi|238762196|ref|ZP_04623168.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638]
 gi|238699543|gb|EEP92288.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638]
          Length = 191

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 28  LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85
           L  +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VENVI+P
Sbjct: 5   LHAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 64

Query: 86  ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145
           AL  G  ++ DR   SS AYQG         + SL++  +    PD T+ LDLP  +GL 
Sbjct: 65  ALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGAFRPDLTLYLDLPPVVGLA 124

Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205
           R + R        LD  E++ +   E+ R  +L++A         +D++   + V+ +I 
Sbjct: 125 RARAR------GELDRIEQESLDFFERTRARYLELAAADSS-IKTIDASQPLEQVSESIS 177

Query: 206 NIVWELVQKR 215
            ++ + + +R
Sbjct: 178 RVLKQWLTRR 187


>gi|284931760|gb|ADC31698.1| Thymidylate kinase [Mycoplasma gallisepticum str. F]
          Length = 210

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 115/214 (53%), Gaps = 10/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G+FI  EG++G+GK++ +  ++       +  +  +REPGG   +EA R +++    
Sbjct: 1   MKKGVFIVIEGVDGSGKSSFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMKLSN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  EA++F A+R +H++  I PAL E KI++CDRF+ SS+ YQG   ++ +  +  
Sbjct: 61  S--DPLTEALLFCASRNEHLKKKILPALNENKIVICDRFVVSSWIYQGLIKNAGYEKVKK 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E     + PD TI+ D+  +I  KR+  R ++     LD + ++ +    K R  +L+
Sbjct: 119 INECVTDGLEPDLTILFDVDPEIAAKRISERSTM---NHLDTYTKERID---KIRNAYLE 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             ++   +  I++++    ++   ++NI+   V+
Sbjct: 173 RLKDNK-KAKIINASLDLDTIYDQVVNIITLFVK 205


>gi|15828523|ref|NP_325883.1| thymidylate kinase (dTMP kinase) [Mycoplasma pulmonis UAB CTIP]
 gi|23821806|sp|Q98RF7|KTHY_MYCPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|14089465|emb|CAC13225.1| THYMIDYLATE KINASE (DTMP KINASE) [Mycoplasma pulmonis]
          Length = 234

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 117/213 (54%), Gaps = 14/213 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSCGVD 60
           +FI+FEGI+ +GKT+ ++ LK  + +KN       T EPGG  +P  +  RH++L+   +
Sbjct: 14  MFITFEGIDASGKTSLLAKLKAHVVQKNLQGKCTFTWEPGGRKSPEIQTIRHLILNKESN 73

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AEA ++++AR  H++ VI P L + K++ CDRF+DSS+AYQ          +  L
Sbjct: 74  -LSPIAEAFLYSSARRIHLDKVILPNLAKNKVVFCDRFVDSSFAYQAFGRDLGFEKIKLL 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E++  +  PD T IL +  +  ++R + R         D  E+++   ++K  + +  +
Sbjct: 133 NELATDKKYPDITFILKISYEESMERRKARQEDE-----DRLEKEENSFYQKVIKGYDFL 187

Query: 181 ARNQPD---RCHIVDSAHSFQSVATNILNIVWE 210
           A + P+   R  ++D++ + + +  ++L I+ +
Sbjct: 188 A-SYPEFQKRIFVIDASKNQEEIFESVLKILKD 219


>gi|257471409|ref|ZP_05635408.1| thymidylate kinase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
           pisum)]
 gi|311086090|gb|ADP66172.1| thymidylate kinase [Buchnera aphidicola str. LL01 (Acyrthosiphon
           pisum)]
 gi|311086664|gb|ADP66745.1| thymidylate kinase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
           pisum)]
 gi|311087767|gb|ADP67846.1| thymidylate kinase [Buchnera aphidicola str. JF98 (Acyrthosiphon
           pisum)]
          Length = 219

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 9/211 (4%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEFGAE 65
             EG+EGAGKT     +K  L++ +   V + R+PG TP AE  R ++      D    E
Sbjct: 15  VIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKE 74

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR+  VE  I+PAL  G  ++ DR   SS AYQG         +  LQ + +
Sbjct: 75  TELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFL 134

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
              +PD TI LD+  +IGL R   R        LD  E + +   +K R+ +L+ ++   
Sbjct: 135 NNFIPDLTIYLDVSPEIGLARALKR------NPLDLIESRSLFFFKKTRRCYLEKSKLDK 188

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
               I+++  + + V  NI   +   + K+V
Sbjct: 189 KTI-IINANLNIKKVTQNITKKMLNWLNKQV 218


>gi|302553088|ref|ZP_07305430.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736]
 gi|302470706|gb|EFL33799.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736]
          Length = 547

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 8/176 (4%)

Query: 37  VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           +TREPG TP  +  R +LL          AEA+++AA R +HV+ V+RPAL  G +++ D
Sbjct: 2   LTREPGATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVISD 61

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           R++DSS AYQG         +  +   +   ++P  T++LD+  +   +R         +
Sbjct: 62  RYIDSSVAYQGAGRDLSPTEIARINRWATNGLVPHLTVLLDVAPETARERF--------T 113

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              D  E +    H + R  FL +A     R  +VD+    ++V T I + + +++
Sbjct: 114 EAPDRLESEPAEFHARVRAGFLTLAAADAGRYLVVDAGQEAEAVTTVIRHRLDQVL 169


>gi|298674964|ref|YP_003726714.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
 gi|298287952|gb|ADI73918.1| thymidylate kinase [Methanohalobium evestigatum Z-7303]
          Length = 199

 Score =  201 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 16/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+ EGI+G+GK+T    L       N  V  TREP      +A    + S    + 
Sbjct: 2   KGKLITLEGIDGSGKSTITERLMNHPSLSN--VVFTREPTKNWIGKAVEQAIRS----DT 55

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQ 121
              AE  +F +   +H+   I PA+  GK ++ DR+LDS  AYQG   S +    +  +Q
Sbjct: 56  DQIAEFFLFTSDHAEHISKTIYPAIENGKNVISDRYLDSRCAYQGVTLSEKFEDPIKWVQ 115

Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +I     ++PD TI LD+  +  ++R  NR           FE+  +   ++    +  +
Sbjct: 116 KIHDGWTIIPDLTIFLDIDPEFAIERCGNRGEQT------KFEK--MEFLQQVYDNYQRL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            ++ P+R  +VDS+   + V  ++++I+   +
Sbjct: 168 MKDNPERFVVVDSSQPIEEVEKDVVDIITSYI 199


>gi|58584408|ref|YP_197981.1| thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|75498064|sp|Q5GTD5|KTHY_WOLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58418724|gb|AAW70739.1| Thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 205

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 25/212 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKT    LL  + ++ + +  + +TREPGGT  AE  R +LL    D  
Sbjct: 1   MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLK---DSI 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E ++  + R +HV+ VI PAL +GKI++CDRF+DS+ AYQG         +  L +
Sbjct: 58  DPVSELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD T ILD+ V IGL R  ++         + +E  ++  + K R+ F +IA 
Sbjct: 118 LV-KIKYPDTTFILDIDVQIGLSRAMDK---------NKYEEMNISFYNKVRKGFQEIAI 167

Query: 183 NQPDRCHIV------DSAHSFQSVATNILNIV 208
           N+PDRC I+      D+      V   I+N V
Sbjct: 168 NEPDRCSIITEIEAKDNNQ----VHVEIVNKV 195


>gi|20093219|ref|NP_619294.1| thymidylate kinase [Methanosarcina acetivorans C2A]
 gi|23821774|sp|Q8THS9|KTHY_METAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|19918569|gb|AAM07774.1| thymidylate kinase Tmk [Methanosarcina acetivorans C2A]
          Length = 206

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 13/214 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+ EGI+G+GK+T    L+   + + ++   TREP        A    +    D+ 
Sbjct: 2   RGKLITLEGIDGSGKSTVAKKLQENSELRVFEPVFTREPTRGTLTGNAVENAIQSDTDQL 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQ 121
              AE  +F A   +H+  +++PAL +GK ++ DR+ DS YAYQG    ++    L+ ++
Sbjct: 62  ---AELFLFTADHAEHLAKLVKPALEDGKTVISDRYSDSRYAYQGITLKNRLDNPLEWVR 118

Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     V+PD T + D+  +I +KR   R           FE+  +      R++FL +
Sbjct: 119 DLHRGWTVIPDLTFLFDIEPEIAVKRCGKRGEQT------KFEK--IEFLRGVRELFLGL 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A  +P+R  IVD++ S + V   ++  + + VQ+
Sbjct: 171 AAEEPERFVIVDASGSPEDVEKAVVQKILDFVQR 204


>gi|311087248|gb|ADP67328.1| thymidylate kinase [Buchnera aphidicola str. JF99 (Acyrthosiphon
           pisum)]
          Length = 219

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 9/211 (4%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEFGAE 65
             EG+EGAGKT     +K  L++ +   V + R+PG TP AE  R ++      D    E
Sbjct: 15  VIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKE 74

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++  AAR+  VE  I+PAL  G  ++ DR   SS AYQG         +  LQ + +
Sbjct: 75  TELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFL 134

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
              +PD T+ LD+  +IGL R   R        LD  E + +   +K R+ +L+ ++   
Sbjct: 135 NNFIPDLTVYLDVSPEIGLARALKR------NPLDLIESRSLFFFKKTRRCYLEKSKLDK 188

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
               I+++  + + V  NI   +   + K+V
Sbjct: 189 KTI-IINANLNIKKVTQNITKKMLNWLNKQV 218


>gi|269114872|ref|YP_003302635.1| thymidylate kinase (dTMP kinase) [Mycoplasma hominis]
 gi|268322497|emb|CAX37232.1| Thymidylate kinase (dTMP kinase) [Mycoplasma hominis ATCC 23114]
          Length = 213

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 9/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPG--GTPAAEAARHVLLS 56
           M+ G F+ FEG++G+GKTT I  LK +L+ KN   D   TREPG   +  AE  R ++L 
Sbjct: 1   MSKGKFVVFEGMDGSGKTTIIKKLKEYLESKNRLDDFVFTREPGSSHSKEAEEIRQLILD 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              + F    +A++FAA+R  ++E  + P L + K ++ DR+  SS+ YQG         
Sbjct: 61  -NDNSFSVMVDALLFAASRRLNLEKCVWPGLKKNKTVISDRYWTSSFVYQGVLGGLGLKK 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +  I+ +E  PD TI  D+  ++ ++R+            D  E  +V  ++K R  
Sbjct: 120 VKDINNIATEETTPDLTIFFDMEPELSVERITQ----IRKTKTDRLESTNVEYYKKLRDS 175

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  +     ++  I+ S  +   +   +LN++ E
Sbjct: 176 YWYVINQGNEKYEIIKSDCNIDELFKRVLNVLKE 209


>gi|21672617|ref|NP_660684.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|21623249|gb|AAM67895.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 213

 Score =  201 bits (511), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 9/218 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGKT     ++R L+  N   V + R+PG TP AE  R ++ +   
Sbjct: 2   MIKSKFIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTY 61

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++F  E E ++  AAR+  V+ +I+PAL +G  ++ DR   SS AYQG     +   ++
Sbjct: 62  IEDFEKETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLIN 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+ + +Q+ +PD TI LD+  +IGLKR   R        LD  E + +   +K R  +L
Sbjct: 122 KLKYLFLQDFIPDLTIYLDVYPEIGLKRASKR------NHLDRIEHRSLTFFKKTRASYL 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              +       I  +  + + V  NI N + + +Q++V
Sbjct: 176 KNIKLDKKIIKIN-ANLNIKIVTQNIKNQILKWLQQKV 212


>gi|25008682|sp|Q8K9J3|KTHY_BUCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 212

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 9/218 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           M    FI  EG+EGAGKT     ++R L+  N   V + R+PG TP AE  R ++ +   
Sbjct: 1   MIKSKFIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTY 60

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            ++F  E E ++  AAR+  V+ +I+PAL +G  ++ DR   SS AYQG     +   ++
Sbjct: 61  IEDFEKETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLIN 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+ + +Q+ +PD TI LD+  +IGLKR   R        LD  E + +   +K R  +L
Sbjct: 121 KLKYLFLQDFIPDLTIYLDVYPEIGLKRASKR------NHLDRIEHRSLTFFKKTRASYL 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              +       I  +  + + V  NI N + + +Q++V
Sbjct: 175 KNIKLDKKIIKIN-ANLNIKIVTQNIKNQILKWLQQKV 211


>gi|88607927|ref|YP_504721.1| thymidylate kinase [Anaplasma phagocytophilum HZ]
 gi|123495836|sp|Q2GLN0|KTHY_ANAPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|88598990|gb|ABD44460.1| thymidylate kinase [Anaplasma phagocytophilum HZ]
          Length = 219

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 20/226 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G GKTT   LL +++     +  V +TREPGGT   E  R V LS    + 
Sbjct: 1   MFITFEGIDGCGKTTQSILLAKYMSDLYGEDNVVLTREPGGTSFNELLRSVFLSVSDYKV 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E  +F A R +    V+  AL   KI++ DR +DS+ AYQG         +  L  
Sbjct: 61  DKLTELFLFLAMRRESFVKVVESALRANKIVISDRCVDSTVAYQGYGCGIDLDLIYKLNS 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + +  ++PD T I+D+ ++  L R               +E   +  + K R+ F  IA 
Sbjct: 121 LVM-GIVPDMTFIIDIDIEKALSRATRNG----------YESNSMDFYHKVRKGFQRIAE 169

Query: 183 NQPDRCHIV-------DSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            +  RC ++       +      SV   I+ ++  ++  ++   SS
Sbjct: 170 EEKHRCVLLRCDDYEENGICDVYSVHNKIVGLLQGVLHNKMDAASS 215


>gi|330984099|gb|EGH82202.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 214

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 5/213 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I  +G  G  K+T +  L + L  + ++V  T EPGGTP  E  R +  S    E
Sbjct: 3   KKGLVICIDGSNGGFKSTTLKALAQHLSSQGHEVICTAEPGGTPIGEKIRVLTRSPENSE 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++FAAAR  +VE VIRPA+  G I L DRF  SS A+Q          +  + 
Sbjct: 63  MSPLSNMLLFAAARAQNVEQVIRPAIERGCICLVDRFSSSSRAFQHAGQGMPLSLVSEID 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+   V  D T+I DL   +GL+R     +    A  D FE       ++ R  +L  A
Sbjct: 123 AIARDGVAADYTLIFDLDPKLGLER-----NGGGKAADDKFELTGFEFLDRVRADYLVQA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P+R  ++D++  ++ V  + +  V   + +
Sbjct: 178 AEAPERFEVIDASRPYEQVLKSAIEAVDRYLAR 210


>gi|294660635|ref|NP_853503.2| thymidylate kinase [Mycoplasma gallisepticum str. R(low)]
 gi|298286819|sp|Q7NAD7|KTHY_MYCGA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|284812298|gb|AAP57071.2| Thymidylate kinase [Mycoplasma gallisepticum str. R(low)]
 gi|284931003|gb|ADC30942.1| Thymidylate kinase [Mycoplasma gallisepticum str. R(high)]
          Length = 210

 Score =  199 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 10/214 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G+FI  EG++G+GK++ +  ++       +  +  +REPGG   +EA R +++    
Sbjct: 1   MKKGVFIVIEGVDGSGKSSFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMKLSN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  EA++F A+R +H++  I PAL E KI +CDRF+ SS+ YQG   ++ +  +  
Sbjct: 61  S--DPLTEALLFCASRNEHLKKKILPALNENKIAICDRFVVSSWIYQGLIKNAGYEKVKK 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + E     + PD TI+ D+  +I  KR+  R ++     LD + ++ +    K R  +L+
Sbjct: 119 INEYVTDGLEPDLTILFDVDPEIAAKRISERSTM---NHLDAYTKERI---NKIRNAYLE 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             ++   +  I++++    +V   ++NI+   V+
Sbjct: 173 RLKDNK-KAKIINASLDLDTVYDQVVNIITLFVK 205


>gi|71893607|ref|YP_279053.1| thymidylate kinase [Mycoplasma hyopneumoniae J]
          Length = 213

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 12/210 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLS 56
           MN  +FISFEGI+ +GK+T + L  ++L+ K    ++  T EPGG    EA   R  LLS
Sbjct: 1   MN--MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLS 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      
Sbjct: 59  -KNNQISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDL 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + SL  +  +   PD TI LD+ +    +R+     +      D  E + V  +EK    
Sbjct: 118 VTSLNSLISENTFPDLTIFLDIKISKAFERM----GIFRDHNRDRLENRGVEFYEKVING 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILN 206
           +  +A+   +    +D   ++  V   I++
Sbjct: 174 YEFLAKKNKN-FFKIDGNGTYDEVLDLIID 202


>gi|73667393|ref|YP_303409.1| thymidylate kinase [Ehrlichia canis str. Jake]
 gi|123614707|sp|Q3YR44|KTHY_EHRCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|72394534|gb|AAZ68811.1| thymidylate kinase [Ehrlichia canis str. Jake]
          Length = 202

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 21/213 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL  +L +     +V +TREPGGT   EA R +L        
Sbjct: 1   MFITFEGIDGSGKTTQSHLLTEYLSKIYGVNNVVLTREPGGTLLNEAVRDLLFQ--AKGL 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + +E + F A R +H   VI+P+LM+ KI++CDRF+DS+ AYQG         +  L +
Sbjct: 59  DSLSELLFFIAMRREHFMKVIKPSLMQKKIVVCDRFIDSTIAYQGYGQGIDCNLICQLND 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V ++ PD T ++D+ V   L R          +C + +E  ++  + + R  F  I  
Sbjct: 119 LVV-DMYPDITFVIDVDVHESLSR----------SCKNGYEFAELEFYYRVRNGFYSIVE 167

Query: 183 NQPDRCHIV-DSA-----HSFQSVATNILNIVW 209
             P RCHI+ D+           +   I+ ++ 
Sbjct: 168 KNPHRCHIITDNNEICDIDGINLIHLKIVKVLQ 200


>gi|148377947|ref|YP_001256823.1| thymidylate kinase [Mycoplasma agalactiae PG2]
 gi|229621732|sp|A5IZC6|KTHY_MYCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|148291993|emb|CAL59385.1| Thymidylate kinase [Mycoplasma agalactiae PG2]
          Length = 215

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 10/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT +  L   L  K       VTREPGG     +E  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTIVQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILD-KES 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +EA+++ A+R  H+E VI PAL E K++LCDR++DS YAYQG        F   L
Sbjct: 60  RLSPISEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E+ ++  +PD TI +D+  +    R   R   R  +  D  + + +  H+K    + ++
Sbjct: 120 TEMVIESTIPDITIFIDITAEQSEYR---RNVSRLIS--DRLDSESLEFHKKVFDAYKEV 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               P R  IV+   S   +   I+  +++
Sbjct: 175 INLDPKRFIIVNGLQSIPEILDEIVEKLFQ 204


>gi|291066996|gb|ADD74112.1| dTMP kinase [Rickettsia felis]
          Length = 227

 Score =  198 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 6/193 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG++G+GK+T   +LK +L  ++  V  TREPGGT  AE  R +L+   +  
Sbjct: 8   KRGRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVHRDLLP 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E +   AAR DH+   I PA+  G  ++CDRF+DS+  YQG    S    + SL 
Sbjct: 68  MS---ELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVYSLH 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQIFL 178
           +  +  +MPD T  +D+   + ++RV+ R     S+     + F+ KD+  ++K    F 
Sbjct: 125 KKLMPSIMPDITFFIDIEPVLAMERVKVRNGSDYSSSNLRNNRFDIKDLDYYKKIHNGFR 184

Query: 179 DIARNQPDRCHIV 191
            +A     R   +
Sbjct: 185 TLADKYLKRIKTI 197


>gi|67459806|ref|YP_247429.1| thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|67459875|ref|YP_247497.1| thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|67005339|gb|AAY62264.1| Thymidylate kinase [Rickettsia felis URRWXCal2]
 gi|67005408|gb|AAY62332.1| Thymidylate kinase [Rickettsia felis URRWXCal2]
          Length = 227

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 6/193 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+ EG++G+GK+T   +LK +L  ++  V  TREPGGT  AE  R +L+   +  
Sbjct: 8   KRGRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVHRDLLP 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E +   AAR DH+   I PA+  G  ++CDRF+DS+  YQG    S    + SL 
Sbjct: 68  MS---ELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVYSLH 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQIFL 178
           +  +  +MPD T  +D+   + ++RV+ R     S+     + F+ KD+  ++K    F 
Sbjct: 125 KKLMPSIMPDITFFIDIEPVLAMERVKVRNGSNYSSSNLRNNRFDIKDLDYYKKIHNGFR 184

Query: 179 DIARNQPDRCHIV 191
            +A     R   +
Sbjct: 185 TLADKYLKRIKTI 197


>gi|54020350|ref|YP_115634.1| thymidylate kinase [Mycoplasma hyopneumoniae 232]
 gi|59798155|sp|Q601T1|KTHY_MYCH2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|166221830|sp|Q4AA79|KTHY_MYCHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|53987523|gb|AAV27724.1| thymidylate kinase [Mycoplasma hyopneumoniae 232]
 gi|144227537|gb|AAZ44342.2| thymidylate kinase [Mycoplasma hyopneumoniae J]
          Length = 211

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    ++  T EPGG    EA   R  LLS   +
Sbjct: 1   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLS-KNN 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 60  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  +   PD TI LD+ +    +R+     +      D  E + V  +EK    +  +
Sbjct: 120 NSLISENTFPDLTIFLDIKISKAFERM----GIFRDHNRDRLENRGVEFYEKVINGYEFL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
           A+   +    +D   ++  V   I++
Sbjct: 176 AKKNKN-FFKIDGNGTYDEVLDLIID 200


>gi|308190301|ref|YP_003923232.1| dTMP kinase [Mycoplasma fermentans JER]
 gi|319777695|ref|YP_004137346.1| thymidylate kinase [Mycoplasma fermentans M64]
 gi|307625043|gb|ADN69348.1| dTMP kinase [Mycoplasma fermentans JER]
 gi|318038770|gb|ADV34969.1| Thymidylate kinase [Mycoplasma fermentans M64]
          Length = 218

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 12/205 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN----YDVHVTREPGGTPA--AEAARHVLLSCG 58
           +FI+FEG +G+GKTT I+ L   L  K      +  +TREPGG     AE  R ++L   
Sbjct: 1   MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNYVLTREPGGKDIIEAEKIRSLILD-K 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +  + +EA+++  +R  H+E V+ PAL E +++LCDR++DS +AYQG   +    F+ 
Sbjct: 60  DSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFVK 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L  + + + MPD TI  ++  +    R   R  +R  +  D  + +  + H+K  + + 
Sbjct: 120 KLTNLIIDKTMPDITIFFEIKPEESKIR---REQIRIVS--DRLDSETELFHQKVYKGYH 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN 203
           ++ + + DR  +VD+  S + V   
Sbjct: 175 ELIKKEKDRFIVVDATKSIEEVLKE 199


>gi|238810242|dbj|BAH70032.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 220

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 12/205 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN----YDVHVTREPGGTPA--AEAARHVLLSCG 58
           +FI+FEG +G+GKTT I+ L   L  K      +  +TREPGG     AE  R ++L   
Sbjct: 3   MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNYVLTREPGGKDIIEAEKIRSLILD-K 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +  + +EA+++  +R  H+E V+ PAL E +++LCDR++DS +AYQG   +    F+ 
Sbjct: 62  DSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFVK 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L  + + + MPD TI  ++  +    R   R  +R  +  D  + +  + H+K  + + 
Sbjct: 122 KLTNLIIDKTMPDITIFFEIKPEESKIR---REQIRIVS--DRLDSETELFHQKVYKGYH 176

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN 203
           ++ + + DR  +VD+  S + V   
Sbjct: 177 ELIKKEKDRFIVVDATKSIEEVLKE 201


>gi|57239472|ref|YP_180608.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579450|ref|YP_197662.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden]
 gi|58617504|ref|YP_196703.1| thymidylate kinase [Ehrlichia ruminantium str. Gardel]
 gi|73920817|sp|Q5FG91|KTHY_EHRRG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920818|sp|Q5HAD6|KTHY_EHRRW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|57161551|emb|CAH58478.1| putative thymidylate kinase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417116|emb|CAI28229.1| Thymidylate kinase [Ehrlichia ruminantium str. Gardel]
 gi|58418076|emb|CAI27280.1| Thymidylate kinase [Ehrlichia ruminantium str. Welgevonden]
          Length = 202

 Score =  197 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 18/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +FI+FEGI+G+GKTT   LL  +L      D V +TREPGGT   E+ R++L S      
Sbjct: 1   MFITFEGIDGSGKTTQSRLLTEYLSGVYGVDNVILTREPGGTFFNESVRNLLFSTKN--L 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +E + F A R +H   VI+PAL + KI++CDRF+DS+ AYQG         ++ L +
Sbjct: 59  DKLSELLFFIAMRREHFMKVIKPALTQQKIVICDRFIDSTIAYQGYGHGIDCKLIEELND 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V ++ P+ T +LD  ++  + R               +E  D+  + + R  F DI +
Sbjct: 119 LVV-DIYPNITFVLDSDINQSVARSNKNG----------YEFLDLEFYARVRDGFRDIVK 167

Query: 183 NQPDRCHIV---DSAHSFQSVATNILNIVW 209
               RC+++   D+  +   ++   L  + 
Sbjct: 168 RNQYRCYLITNVDATKNINEISAIYLKTIK 197


>gi|146320508|ref|YP_001200219.1| thymidylate kinase [Streptococcus suis 98HAH33]
 gi|145691314|gb|ABP91819.1| Thymidylate kinase [Streptococcus suis 98HAH33]
          Length = 169

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 4/170 (2%)

Query: 46  AAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
            AE  R+++L+        + E ++F AAR  H++  I P L +GK+LL DRF+DSS AY
Sbjct: 3   IAEEIRNIILNPANTAMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAY 62

Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           QG         +  L + +   + PD T+  D+  + GL R+           +D  + +
Sbjct: 63  QGFGRGLDIGDIHWLNQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDME 118

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +H + RQ +L I   +P+R   +D++   ++V  N L ++ +   +R
Sbjct: 119 KADMHRRVRQGYLSILEQEPERFVKIDASQPLEAVVANALAVIKKRFAER 168


>gi|320107127|ref|YP_004182717.1| thymidylate kinase [Terriglobus saanensis SP1PR4]
 gi|319925648|gb|ADV82723.1| thymidylate kinase [Terriglobus saanensis SP1PR4]
          Length = 217

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 8/217 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
           +G FISFEG++G+GKTT +  L+ FL  +  +V   R+PGGT   +  R V+L    +  
Sbjct: 2   AGFFISFEGLDGSGKTTQLRRLETFLIGRGREVVSLRQPGGTALGDRIRAVVLDSKTEAA 61

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +     E  +  A R   +  VI PAL  GKI+LCDR+ DS+ AYQG         + 
Sbjct: 62  VGKIAPMTEMALMFADRAQAIAEVILPALEAGKIVLCDRWTDSTEAYQGGGRGLGAEKVL 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQ 175
            +      ++ P  TI+L   +   LKR + R     +A     + FE +    + +   
Sbjct: 122 EMHHAVCGDLWPALTILLLPDLQASLKRARRRNDRHIAAVGTDENRFETEGDGFYGRIHA 181

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++  I   +  R   +    +   V   + + V + +
Sbjct: 182 VYTAIGYREKARVVTI-GDGNLDEVEAAVRSAVLQRI 217


>gi|213054494|gb|ACJ39423.1| thymidine monophospho kinase [Staphylococcus aureus]
 gi|213054496|gb|ACJ39424.1| thymidine monophospho kinase [Staphylococcus aureus]
          Length = 176

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 104/184 (56%), Gaps = 8/184 (4%)

Query: 19  THISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDH 78
           T I+ +   L  K+YDV +TREPGG P  E  R ++L    ++     EA++FAA+R +H
Sbjct: 1   TVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIRTEAMLFAASRREH 57

Query: 79  VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL 138
           +   + PAL EGK++LCDR++DSS AYQG         + +L E ++  + PD TI L++
Sbjct: 58  LVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNV 117

Query: 139 PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198
             ++G +R+     ++ S   +  +++D+  HEK  + + +I  N+  R   V++    +
Sbjct: 118 SAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLE 172

Query: 199 SVAT 202
           +V  
Sbjct: 173 NVVE 176


>gi|91773625|ref|YP_566317.1| thymidylate kinase [Methanococcoides burtonii DSM 6242]
 gi|121691672|sp|Q12VF9|KTHY_METBU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|91712640|gb|ABE52567.1| Thymidylate kinase [Methanococcoides burtonii DSM 6242]
          Length = 201

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 16/213 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+ EGI+G+GK+T    L         +   T+EP  +   +A    + S   +  
Sbjct: 2   KGKLITLEGIDGSGKSTITRFLNSH--PAFANAVFTKEPTTSWIGDAVYKAIQSDTDE-- 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-HLFLDSLQ 121
              AE ++F A   DH+  +IRPA+ EGKI++ DR+ DS YAYQG     +    ++ +Q
Sbjct: 58  --LAELMLFTADHADHISTLIRPAIEEGKIVISDRYSDSRYAYQGVTLKERMEEPMEWIQ 115

Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            I     ++PD T++ D+   + ++R   R           FE+ D++  +  R+ +L +
Sbjct: 116 MIHRGWTIIPDLTLLFDIDPAVAVQRCGKRGEQT------KFEKTDLL--KGVRENYLKL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A  +P+R  ++D+    + +  ++L  +  +++
Sbjct: 168 AEKEPERFVVIDTDRDLKEIEKDVLQAITSIIE 200


>gi|87125181|ref|ZP_01081027.1| Thymidylate kinase [Synechococcus sp. RS9917]
 gi|86166950|gb|EAQ68211.1| Thymidylate kinase [Synechococcus sp. RS9917]
          Length = 217

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 92/224 (41%), Gaps = 15/224 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL 55
           +  G  +  EGI+G GKTT +  L  +L           +  TREPGGT   +A R +LL
Sbjct: 3   IQRGRLLVLEGIDGCGKTTQMEHLATWLPVSGLMPSTARLIQTREPGGTALGQALRGLLL 62

Query: 56  SCGVDEFGAEAE-AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                         +++AA R  HV  VIRPAL  G  +L DRF  S+ AYQG       
Sbjct: 63  HPPEAAAPEAVAELLLYAADRAQHVAQVIRPALERGDWVLSDRFTGSTMAYQGFGRQLDQ 122

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             +  L  I+   + PD T+ L LPV + ++R       R     D  E   +   ++  
Sbjct: 123 ALIRQLALIATGGLTPDLTVWLSLPVAVSVER-------RGGRRADRIEASGLDFLQRVA 175

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
             F   A  Q      V +      V   +  ++ +  ++   P
Sbjct: 176 DGFAAQAAEQG--WLEVRADRPLAQVREALEALLSQQARRWARP 217


>gi|72080598|ref|YP_287656.1| thymidylate kinase [Mycoplasma hyopneumoniae 7448]
          Length = 213

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    D+  T EPGG    EA   R  LLS   +
Sbjct: 3   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLS-KNN 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 62  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  +   PD TI LD+ +    +R+     +      D  E K V  +E+    +  +
Sbjct: 122 NSLISENTFPDLTIFLDIKISKSFERM----GIFRDHNRDRLENKGVEFYERVINGYEFL 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
            +   +    +D   ++  V   I++
Sbjct: 178 TKKNKN-FFKIDGNGTYDEVLDLIID 202


>gi|294496621|ref|YP_003543114.1| thymidylate kinase [Methanohalophilus mahii DSM 5219]
 gi|292667620|gb|ADE37469.1| thymidylate kinase [Methanohalophilus mahii DSM 5219]
          Length = 199

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 16/211 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  ++ EGI+G+GKTT +  L++       D+  TREP      +A    +      + 
Sbjct: 2   KGKLVTLEGIDGSGKTTIMEYLEQ--NPIYSDIIFTREPTKDWIGQAVIRAI----HSDV 55

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQ 121
              AE ++F A   +H+ N I PA+  G++++ DR+ DS  AYQ      +    ++ ++
Sbjct: 56  DPLAELLLFTADHAEHIRNTIIPAVQAGRVIISDRYSDSRIAYQSSTLKDRFDDPVEWIK 115

Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     V+PD T++LD+  +I + R  +R +         FE+  V    + R +FL +
Sbjct: 116 QLHRGWSVVPDLTLLLDIDPEIAVSRCNSRDAQT------KFEK--VDFLSQVRNVFLQL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A   P R  I+D++   + V   +   +  L
Sbjct: 168 AEENPQRFVIIDASQGLEKVKKEVDKAINGL 198


>gi|291320671|ref|YP_003515936.1| thymidylate kinase [Mycoplasma agalactiae]
 gi|290753007|emb|CBH40983.1| Thymidylate kinase [Mycoplasma agalactiae]
          Length = 215

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 10/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FI+FEG++G+GKTT +  L   L  K       VTREPGG     +E  R ++L     
Sbjct: 1   MFITFEGLDGSGKTTILQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILD-KES 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +EA+++ A+R  H+E VI  AL E K++LCDR++DS YAYQG        F   L
Sbjct: 60  RLSPISEALLYTASRRIHIEKVILSALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E+ ++  +PD TI +D+  +    R   R   R  +  D  + + +  H+K    + ++
Sbjct: 120 TEMVIESTIPDITIFIDITAEQSEYR---RNVSRLIS--DRLDSESLEFHKKVFDAYKEV 174

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               P R  IV+   S   +   I+  +++
Sbjct: 175 INLDPKRFIIVNGLQSIPEILDEIVEKLFQ 204


>gi|77414833|ref|ZP_00790949.1| thymidylate kinase [Streptococcus agalactiae 515]
 gi|77159110|gb|EAO70305.1| thymidylate kinase [Streptococcus agalactiae 515]
          Length = 163

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 1/149 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   + E +++ AAR  H+   + PAL EGKI+L DRF+DSS AYQG         +  
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQ 148
           L + +     PD  +  D+P ++GL+R+Q
Sbjct: 121 LNDYATDSHKPDLXLYFDVPSEVGLERIQ 149


>gi|166221829|sp|Q4A8A6|KTHY_MYCH7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|144575350|gb|AAZ53633.2| thymidylate kinase [Mycoplasma hyopneumoniae 7448]
          Length = 211

 Score =  195 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    D+  T EPGG    EA   R  LLS   +
Sbjct: 1   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLS-KNN 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 60  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  +   PD TI LD+ +    +R+     +      D  E K V  +E+    +  +
Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERM----GIFRDHNRDRLENKGVEFYERVINGYEFL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
            +   +    +D   ++  V   I++
Sbjct: 176 TKKNKN-FFKIDGNGTYDEVLDLIID 200


>gi|301167072|emb|CBW26651.1| putative thymidylate kinase (dTMP kinase) [Bacteriovorax marinus
           SJ]
          Length = 229

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 7/212 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F+SFEGIEGAGK+T I   K +L+ + + V + REPGGTP  E  R  +L+   +    
Sbjct: 21  FFLSFEGIEGAGKSTQIISAKEYLESQGFRVLILREPGGTPFGEKLRQAILNSKSE-LEP 79

Query: 65  EAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +EA +FA++R   +  V    L   G +++ DR+LDSS AYQG         + ++  +
Sbjct: 80  ISEAYLFASSRAQLLTEVTLKELNTPGTVVIYDRYLDSSIAYQGIARGLGVDNILNIHNV 139

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++P  T  L +  +    R + R + +     DYFE +    ++   Q +      
Sbjct: 140 FPLNLIPHKTFYLKISTETSFGRQRVRNAPK-----DYFESRGKDFYDNLVQGYELSCEL 194

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            P+R  ++D   S   V  +I   +  L+ KR
Sbjct: 195 FPERISVIDGNRSLDDVFADIKEELNHLIFKR 226


>gi|312601234|gb|ADQ90489.1| Thymidylate kinase [Mycoplasma hyopneumoniae 168]
          Length = 211

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60
           +FISFEGI+ +GK+T + L  ++L+ K    ++  T EPGG    EA   R  LLS   +
Sbjct: 1   MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALLIREFLLS-KNN 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E ++FA AR  H+E +I PAL  GKI+LCDR++DSS AYQG  +      + SL
Sbjct: 60  QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  +   PD TI LD+ +    +R+     +      D  E K V  +E+    +  +
Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERM----GIFRDHNRDRLENKGVEFYERVINGYEFL 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206
            +   +    +D   ++  V   I++
Sbjct: 176 TKKNKN-FFKIDGNGTYDEVLDLIID 200


>gi|94266074|ref|ZP_01289792.1| Thymidylate kinase [delta proteobacterium MLMS-1]
 gi|94267013|ref|ZP_01290658.1| Thymidylate kinase [delta proteobacterium MLMS-1]
 gi|93452287|gb|EAT02928.1| Thymidylate kinase [delta proteobacterium MLMS-1]
 gi|93453357|gb|EAT03788.1| Thymidylate kinase [delta proteobacterium MLMS-1]
          Length = 218

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+ I+ EGI+G GK+T + LL R L+    +V  T EP   P     R +  +    + 
Sbjct: 13  AGILIALEGIDGTGKSTQLKLLARRLRELGLEVVTTFEPTDGPHGRYLRQMFKNRA--QL 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E  +F A R DHVE VI PAL  GK++L DR+  S+ AYQG         +   ++
Sbjct: 71  PPKEELRLFIADRHDHVEQVIAPALAAGKVVLTDRYYFSTAAYQGAAGHDPAAIIAENEQ 130

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD  ++L+ P  +G+ RV+          L+ FE++D     +   IF  +A 
Sbjct: 131 FA---PRPDLVLLLEAPPAVGIARVRE----LRGESLNDFEQED--YLRRVTAIFASLAD 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +   R   +D+      V   +   V +L++++
Sbjct: 182 S---RIRRIDATGRLDQVQQRLWPPVAQLLRQQ 211


>gi|119719934|ref|YP_920429.1| dTMP kinase [Thermofilum pendens Hrk 5]
 gi|119525054|gb|ABL78426.1| thymidylate kinase [Thermofilum pendens Hrk 5]
          Length = 254

 Score =  194 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 19/221 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL+++ EGI+G+GKTT  ++L   L  + + V + REP      E            + 
Sbjct: 53  GGLYVALEGIDGSGKTTQAAMLYEKLSAEGFQVVIVREPWVPAIKEFLYK-------HDL 105

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EAE  +FAA R+     V+ P+L  GKI++ DR + +S AYQ     +   F+ ++ +
Sbjct: 106 DVEAEVYLFAADRIILQREVVLPSLRAGKIVVSDRSVFASLAYQSS-RGADQDFILAVNK 164

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD  ++LDLPV+  +KR+ +R +         FE  D    EK R  +L +A 
Sbjct: 165 SVRF---PDVVVLLDLPVEEAMKRLSSRVAQT------RFE--DPGYMEKVRAKYLQLAE 213

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
             P++  +VD++   + V   IL  +  +V+ R+     ++
Sbjct: 214 EYPEKFIVVDASKPPEEVNREILREIVSIVRSRIRSEPGER 254


>gi|291288268|ref|YP_003505084.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885428|gb|ADD69128.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809]
          Length = 211

 Score =  194 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 4/209 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ +GI+G GK+T  + +   L +   +V +TREPGGT A    R +L+S   D    
Sbjct: 6   LFIAVDGIDGCGKSTLSAGMAEKLDKLGRNVKLTREPGGTDAGLLIRQLLVSKKYD-LEP 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++E +++ A RL+H   ++ P L +G  ++ DRF+ S+YAYQ          LD L   S
Sbjct: 65  QSELMLYCADRLEHQTKLVIPVLEKGFDVISDRFVSSTYAYQIFGRGLDKDLLDYLTGYS 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183
           ++  MPD T I+++  +  L+R  +R    +    +  FE   +   +K    F   A  
Sbjct: 125 IRR-MPDITFIIEIDPETALERAMSRLVRDKKVDEEGKFEALGLEFFKKVADGFDWYAGK 183

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +    ++ A S Q+V  ++++I+   V
Sbjct: 184 FENVWR-INGAQSPQAVLNDVMHILDNFV 211


>gi|193216551|ref|YP_001999793.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1]
 gi|193001874|gb|ACF07089.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1]
          Length = 213

 Score =  194 bits (493), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 11/214 (5%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEA--ARHVLL 55
           MN    FI+ EG++G+GKTT I +LK +L       D   TREPG   +AEA   R ++L
Sbjct: 1   MNKKAKFITIEGMDGSGKTTIIEMLKDYLFNIGKIDDFVFTREPGSAYSAEAENIRKIVL 60

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G  +F    +A++F  +R  ++E  I PAL   K ++ DRF  SS+ YQG        
Sbjct: 61  DSGN-KFSPMVDALLFVTSRRINLEKAIWPALKAKKNVISDRFWHSSFVYQGILGKVGLD 119

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +  + E+ +++  PD  I  DL  ++ ++R+     LRE    D  E   V  ++  R+
Sbjct: 120 KVRQINEMVIEDTQPDFVIFFDLQPEVSVERLTK---LREK--TDRLETDQVEYYQALRK 174

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            + ++  + P +  I+D++ S   V   +L I+ 
Sbjct: 175 AYFEVINSDPTKFRIIDASQSIVKVFEQLLIILK 208


>gi|304321770|ref|YP_003855413.1| thymidylate kinase [Parvularcula bermudensis HTCC2503]
 gi|303300672|gb|ADM10271.1| thymidylate kinase [Parvularcula bermudensis HTCC2503]
          Length = 209

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 108/215 (50%), Gaps = 33/215 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+FEG EGAGK+T I+LL   L+     V +TREPGGTP  EA R VLL+     + 
Sbjct: 5   GRFITFEGPEGAGKSTQIALLAERLRSAGEAVTMTREPGGTPGGEALRDVLLNPAAT-WS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++  AAR  H++ +I PAL  G+ +LCDRF  S+ AYQG  D      L +L+  
Sbjct: 64  PLAEALLMNAARDAHMQTLILPALQRGETVLCDRFAASTLAYQG--DGVAPETLAALEAA 121

Query: 124 SVQEVMPDCTIILDL-----------PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            V            +           PV  GL R + R +       D FE + +  HE 
Sbjct: 122 VV------------VRRPDLVLLLDLPVAEGLARAKARSTA------DRFEGRRLDYHEG 163

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
            R  FL++A   P+  H +D+A     V+  IL +
Sbjct: 164 VRARFLELAAKDPN-MHCIDAAQPQDDVSAAILEV 197


>gi|119872697|ref|YP_930704.1| dTMP kinase [Pyrobaculum islandicum DSM 4184]
 gi|119674105|gb|ABL88361.1| thymidylate kinase [Pyrobaculum islandicum DSM 4184]
          Length = 205

 Score =  193 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 20/210 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EGI+G+GK+T I  L   L +    V+VTREP G P     +   L  G       
Sbjct: 3   FVAIEGIDGSGKSTVILQLAEMLPK----VYVTREPSGGPIGRLIKEWALKGGT--IDPH 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +A++FAA R++H +  I P + EG I++ +R+++SS AYQG       + +D ++ I+ 
Sbjct: 57  VDALLFAADRIEHYKREIEPKVREGYIVISERYIESSIAYQGAAG----VPIDFIKIINS 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                D TIILD+  +I + R++ R    +         +     ++ R+I+L  AR + 
Sbjct: 113 AVPKADITIILDVDPEIAIARIKQRGDSEKY--------EHSAFLKRVREIYLQRAREEG 164

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               +VD++     VA ++  I+ +++  R
Sbjct: 165 --YPVVDASRPPNVVAKDVAEIITQMLNYR 192


>gi|171184628|ref|YP_001793547.1| dTMP kinase [Thermoproteus neutrophilus V24Sta]
 gi|170933840|gb|ACB39101.1| dTMP kinase [Thermoproteus neutrophilus V24Sta]
          Length = 204

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 20/210 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EGI+G+GK+T IS L   L +    V+ TREP G P     +   L  G       
Sbjct: 3   FVAIEGIDGSGKSTVISRLAEILPK----VYTTREPSGGPIGRLIKEWALRGGT--VDPH 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +A++FAA R++H    + P + EG I++ +R+++SS AYQG        F+ S+  +  
Sbjct: 57  VDALLFAADRIEHYRREVEPKVREGYIVISERYVESSIAYQGAA-GVPLEFIKSINSLV- 114

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T+ILD+  ++ + RV+ R        L+ +E+  +    + R+I+L  AR + 
Sbjct: 115 --PRPDVTVILDVEPEVAISRVRQR------GALEKYEQ--MAFLRRVREIYLARAREEG 164

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               +VD+A   + VA  +  IV + +  R
Sbjct: 165 --YPVVDAARPPEVVAREVAEIVKKALDYR 192


>gi|327398213|ref|YP_004339082.1| Thymidylate kinase [Hippea maritima DSM 10411]
 gi|327180842|gb|AEA33023.1| Thymidylate kinase [Hippea maritima DSM 10411]
          Length = 201

 Score =  192 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 16/206 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           NS  +I+FEGI+ +GKTT   L   FL+++ ++V  T+EPGGT      R VLL+    +
Sbjct: 8   NSCRYIAFEGIDASGKTTQAKLFVDFLKKEGFNVFFTKEPGGT--IPFFREVLLN---KQ 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A+  +F A R   +   I+  L  G +++ DR   S+ AYQG  D     FL    
Sbjct: 63  LVKQAQLFLFLADRAQTILT-IKKKLDAGFVVVSDRSFYSTLAYQGFGDDMDIGFLKQAN 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           EI+   + PD    +D+  +  + R+  +         D  E K V   E+ RQ ++ ++
Sbjct: 122 EIATGGLKPDLVFCIDITTNEMMNRLNKK---------DAIESKPVGFFERVRQGYIKLS 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207
           ++  D  ++V+   S   V + ++ I
Sbjct: 173 KDY-DNFYLVNGLRSIDDVFSEVVEI 197


>gi|145590421|ref|YP_001152423.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514]
 gi|145282189|gb|ABP49771.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514]
          Length = 196

 Score =  192 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 20/212 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+  EGI+G+GK+T ISLL + L R    V+VTREP  +P     +   L  G       
Sbjct: 3   FVVIEGIDGSGKSTVISLLSKLLPR----VYVTREPSASPIGRLIKEWALREGTA--DPR 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +A++FAA R++H +  I P L EG I++C+R+++SS AYQG       + ++ ++ I+ 
Sbjct: 57  VDALLFAADRIEHYKREIEPRLREGYIVICERYVESSIAYQGAAG----VPIEYIKFINS 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD T+ILD+  ++ + RV+ R +  +         + +   ++ R I+L  A  + 
Sbjct: 113 AVPKPDITVILDVDPEVAIARVKQRGTAEKY--------EQLSFLKRVRGIYLSRAAEEG 164

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
               ++D++   + VA  +  ++ + +  R S
Sbjct: 165 --YPVLDASRPAEEVAKEVARLIEKRLGSRES 194


>gi|229100819|ref|ZP_04231634.1| Thymidylate kinase [Bacillus cereus Rock3-28]
 gi|228682586|gb|EEL36648.1| Thymidylate kinase [Bacillus cereus Rock3-28]
          Length = 174

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 4/175 (2%)

Query: 38  TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
           TREPGG   +E  R +L         A  EA+++AAAR  H+   + PAL E  ++LCDR
Sbjct: 3   TREPGGIAISEDIRTILHKQEYTMMEARTEALLYAAARRQHLVEKVMPALNENYLVLCDR 62

Query: 98  FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           F+DSS AYQG         +  +   + ++ MP  TI LD+  ++GL R++         
Sbjct: 63  FIDSSLAYQGYARGLGMDKVFEINRFATEDCMPSVTIYLDIEPEVGLARIEK----DAGR 118

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            ++  + +D+  H++ R+ +L +     DR  +V++    + +   ++ I+ + +
Sbjct: 119 EVNRLDMEDISFHKRVREGYLQVVERFSDRIVLVNADQPMEKLIEEVVQIIEDKL 173


>gi|255348545|ref|ZP_05380552.1| thymidylate kinase [Chlamydia trachomatis 70]
 gi|255503085|ref|ZP_05381475.1| thymidylate kinase [Chlamydia trachomatis 70s]
 gi|255506763|ref|ZP_05382402.1| thymidylate kinase [Chlamydia trachomatis D(s)2923]
 gi|289525226|emb|CBJ14702.1| thymidylate kinase [Chlamydia trachomatis Sweden2]
 gi|296434774|gb|ADH16952.1| thymidylate kinase [Chlamydia trachomatis E/150]
 gi|296438494|gb|ADH20647.1| thymidylate kinase [Chlamydia trachomatis E/11023]
          Length = 203

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 9/198 (4%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARL 76
           KT  I  L + L  +  ++  TREPGG    ++ R +LL     +    AE ++F AAR 
Sbjct: 13  KTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISPYAELLLFLAARA 71

Query: 77  DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE--VMPDCTI 134
            H++  I PAL  GK ++ DRF DS+  YQG        F+ +L    V +   +PD T 
Sbjct: 72  QHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHVVGDKPFLPDITF 131

Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
           +LD+P   GL R   +        LD FE+K  + H+  R+ FL +A   PDR  ++D+ 
Sbjct: 132 LLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAEKAPDRYKVLDAL 185

Query: 195 HSFQSVATNILNIVWELV 212
              ++     L  +  L+
Sbjct: 186 LPTEASVDQALLQIRALI 203


>gi|296535552|ref|ZP_06897734.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957]
 gi|296264138|gb|EFH10581.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957]
          Length = 177

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 6/179 (3%)

Query: 34  DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
            V  TREPGG P AEA R +LLS GV  +   AEA++  AAR +H    IRPAL  G  +
Sbjct: 1   PVLRTREPGGAPGAEALRGLLLSGGV-AWDPVAEAMLMFAARREHWVKTIRPALAAGIWV 59

Query: 94  LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           +CDRF DS+ AYQ             L+++++ EV PD T++LDLP + G+ R  +R   
Sbjct: 60  VCDRFADSTLAYQCHGHGLDAAIWRQLKQVALGEVAPDATLVLDLPPERGMARALSR--- 116

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              A  D  E      H +    F  IA  +P RC ++D+A    SV    +  + + +
Sbjct: 117 --GAAPDRIESLGSAFHARVNAAFRSIAEAEPQRCALLDAALPPDSVLDQAVAALRQRL 173


>gi|88608604|ref|YP_506430.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama]
 gi|123491811|sp|Q2GDL6|KTHY_NEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|88600773|gb|ABD46241.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama]
          Length = 199

 Score =  192 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 20/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EGI+G+GK+T + LL +FL +  Y   +TREPGGT  AE+ R ++L    D    
Sbjct: 1   MFIVLEGIDGSGKSTQVKLLSKFLAKDGYPCVLTREPGGTSFAESLRSMILH---DPIDP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++  +AR+DH   VI PAL EGK+++CDRF+ S+ AYQG  D      +  L  +S
Sbjct: 58  MARLLLIVSARVDHYNKVILPALKEGKVVVCDRFIYSTLAYQGYGDKIDLQTILDLHRLS 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              V PD T++L               S  +    D FER            +  IAR  
Sbjct: 118 GCLVEPDLTLLL-------------LGSGHKKLGRDNFERMPREYLSNVCMGYEKIARMY 164

Query: 185 PDRCHIVDS---AHSFQSVATNILNIVWE 210
           P+  H++       + + +   +   + E
Sbjct: 165 PN-IHVIKCMGVGRTSEEIVKIVQGKISE 192


>gi|322435114|ref|YP_004217326.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9]
 gi|321162841|gb|ADW68546.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9]
          Length = 220

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 11/222 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI+FEG++G+GKTT + LL   L  +   V   R+PGGT   +  R VLL    +
Sbjct: 1   MGRGFFITFEGLDGSGKTTQLKLLAAALTAEGRTVVSLRQPGGTALGDRIRGVLLDSRSE 60

Query: 61  E----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                    AE  +  A R   +  VIRPAL  G ++LCDR+ DSS AYQG         
Sbjct: 61  AALGTIAPLAELALMFADRAQAIAEVIRPALGAGAVVLCDRYTDSSEAYQGAGRELGSER 120

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL---RESACLDYFERKDVMIHEKR 173
           + +L E   + + P+ T++L   ++  L+R + R +          + FER+    + + 
Sbjct: 121 VLALHETVCEGLWPELTVLLLPSLEASLRRARRRNTRHVKEHGTDENRFEREGDAFYGRI 180

Query: 174 RQIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWELVQ 213
            + +  IA  +P R   V  D+    +++A  +  IV   ++
Sbjct: 181 HEAYERIAEREPGRVVAVRDDA--PVEAIAGKVWEIVAGRLR 220


>gi|212696419|ref|ZP_03304547.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676591|gb|EEB36198.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 167

 Score =  191 bits (487), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 6/170 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GL I FEG +G+GKTT +  +   L +  YD++  REPGGT  +E  R ++L     + 
Sbjct: 2   NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  EA+++AA+R   +E  +RP L +G I+LCDRF+ SS  YQG         +  + +
Sbjct: 62  SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQGIGRGLGIDEVKKIND 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            ++ E+  D T+ L++     + R +  +        D  E +D   H+K
Sbjct: 122 FAIGEIKADLTLFLNIDYKTAIDRKRKNF------VSDRLENEDDSFHKK 165


>gi|328951753|ref|YP_004369087.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
 gi|328452077|gb|AEB07906.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109]
          Length = 217

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 16/222 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+FEG++G GKTT   LL + L R    V +TREP   P  +  R +LL       
Sbjct: 9   GGRLIAFEGVDGVGKTTQAHLLAQALSRLGLSVILTREPTTGPWGQQIRQILLHGR-QGL 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +AE  +F A R +HV  VIRPAL+ GKI++ DR+  SS AYQG         +    E
Sbjct: 68  TPKAELELFIADRREHVAQVIRPALVAGKIVITDRYYFSSMAYQGA-LGLDPDRIQKCHE 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD  IIL LP+     R+Q R   + S+       +++    K  QIF  +  
Sbjct: 127 --TFAPRPDLAIILTLPLSEITARLQQRSGQKRSSF------ENLAYLTKVAQIFSRLRA 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ---KRVSPLSS 221
                   +D   +  +V   IL +V  L++   K+ +P+S 
Sbjct: 179 PYLQH---LDGQGTIAAVHARILTLVQPLLKPSRKQSAPVSG 217


>gi|126465530|ref|YP_001040639.1| thymidylate kinase [Staphylothermus marinus F1]
 gi|166223119|sp|A3DM71|KTHY_STAMF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|126014353|gb|ABN69731.1| thymidylate kinase [Staphylothermus marinus F1]
          Length = 199

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 19/212 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N+G F+  EGI+GAGKT+    L+ FL  K ++VH T EP  T   EA    L     + 
Sbjct: 4   NNGFFLVLEGIDGAGKTSIAFKLRDFLVEKGFNVHYTYEPYNTLYVEA----LKKKYNEY 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  +A+ +AA RL H+   I P L  G I++CDR+  SS AYQ      Q   ++ + 
Sbjct: 60  RDAYLDALTYAADRLVHIRTEILPYLRRGYIVICDRYYYSSAAYQSA----QGAPIEWVL 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDI 180
           EI+   + PD TI LD+   IG+KR +   +         F E + +    + R+ +L +
Sbjct: 116 EINKYALKPDLTIYLDVDPAIGVKRRKGLNT--------RFPEYEKLDFLYRVRENYLWL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                    +VD+   F  V  ++  IV E +
Sbjct: 168 V--DKGYMVLVDANREFDKVYRDVEKIVLEHL 197


>gi|206896205|ref|YP_002246823.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265]
 gi|238057696|sp|B5Y7S6|KTHY_COPPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|206738822|gb|ACI17900.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265]
          Length = 193

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 14/205 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EGI+G GK+T  SLL   + +K   V  T EPG        R +++    +    
Sbjct: 1   MFIVVEGIDGCGKSTVASLLAAEIGKK-RPVFHTFEPGHVRDG-LYRELIM---ENVDNP 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A +F   R +HV+ +I+PAL +G+ ++C+R+ DS+ AYQG         ++ + E +
Sbjct: 56  FVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEA 115

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + PD    LD+   + L R+QN+         D  E + +   ++ R+ + +IAR +
Sbjct: 116 IDGLWPDKIFYLDIEPHLALARLQNKEK-------DALEGQGLEFLQRVREGYEEIARTR 168

Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209
                  D+    + +   IL  V 
Sbjct: 169 GYIYM--DATLPPEIIVKRILEEVK 191


>gi|325967673|ref|YP_004243865.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28]
 gi|323706876|gb|ADY00363.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28]
          Length = 199

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++ EGI+G GK+T IS+L++ L+   Y V+ T EP  +P     R  LL    +    
Sbjct: 1   MFVAVEGIDGVGKSTVISMLRKKLESNGYRVYTTAEPSQSPIGRLIRDWLLKPSSNAAHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++F A R+ H    ++P L  G +++ +R+++S+ AYQG        +L  L    
Sbjct: 61  SIFALLFTADRVQHYYGEVKPKLDSGYLVITERYMESTLAYQGAM-GLPQEWLMELHRFV 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD TIILD P++  + R+ NR        L+ FE  +     K R+  L  A   
Sbjct: 120 ---PRPDLTIILDAPIETVIGRLSNR------RELEVFE-VNKEFLSKVREFLLRRAST- 168

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +   ++++    +S+  +I  ++ + +++
Sbjct: 169 -NNYPVINADRDLESIVNDIYELIIDALRR 197


>gi|297569137|ref|YP_003690481.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925052|gb|ADH85862.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2]
          Length = 222

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G+ I+ EGI+G GK+T   LL + L++   +V VTREP   P     R + L+     
Sbjct: 12  RAGVLIALEGIDGTGKSTQQQLLAQRLRQLGLEVVVTREPTDGPYGRRLRELFLNRA--S 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E  +F A R +HV  +I PAL  G++++ DR+  S+ AYQG         L   +
Sbjct: 70  LSPEEELQLFLADRREHVAKLIEPALKAGRVVITDRYYYSTAAYQGASGHDPAAILAINE 129

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     PD  ++L+ P  +G++RVQ          L+ FE++D     +   IF   +
Sbjct: 130 SFA---PRPDLVLLLEAPPAVGVRRVQE----GRGESLNDFEQED--YLRRVAGIFAGFS 180

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              P     V++  + + V   I   V  L+
Sbjct: 181 A--PG-LVRVNATGAIEQVQVEIWQAVEALL 208


>gi|47458911|ref|YP_015773.1| thymidylate kinase [Mycoplasma mobile 163K]
 gi|59798285|sp|Q6KIL4|KTHY_MYCMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|47458239|gb|AAT27562.1| thymidylate kinase [Mycoplasma mobile 163K]
          Length = 209

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 13/216 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60
           +FISFEGI+GAGK+T I  LKR L +   +     TREPGG     AE  R +LL    +
Sbjct: 1   MFISFEGIDGAGKSTIIKKLKRKLPKLYPDKKFVFTREPGGKKLKEAEKIRKILLDKKTN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E +++AA+R  H++++I PAL +G I++ DR++DSSY YQG         +  +
Sbjct: 61  -IDPMTETLLYAASRRVHLDSLIWPALKKGHIVISDRYVDSSYVYQGIARGLGVKVVKEI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +I+    MPD T  L +  +  + R   R         D  E        +  + +  I
Sbjct: 120 NDIATSNFMPDYTFFLSISEEESIIRRHKR------GKPDRLEMSSKDFFSRAYEGYFKI 173

Query: 181 ARN--QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    DR  +V++  +  ++  NILN   ++++K
Sbjct: 174 INSPTMADRFILVNAEENVGTILKNILNEFDKILKK 209


>gi|18312312|ref|NP_558979.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2]
 gi|23821790|sp|Q8ZY35|KTHY_PYRAE RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|18159759|gb|AAL63161.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2]
          Length = 192

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EGI+G+GK+T ISLL++ L R    V+ TREP   P     +   L  G       
Sbjct: 3   FVAIEGIDGSGKSTVISLLEKKLPR----VYATREPSSGPIGRLIKEWALKGG--SVDPH 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +A++FAA R++H +  I P + EG I++ +R+++SS AYQG        F+  +  +  
Sbjct: 57  VDALLFAADRIEHYKREIEPRVREGYIVISERYIESSIAYQGAA-GVSREFVKYINSLV- 114

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD TIILD+   I   R++ R    +         + +    K R+I+L  A  + 
Sbjct: 115 --PKPDLTIILDVDPSIAEARIRQRGGAEKY--------EYLSFLRKVREIYLARAAEEG 164

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213
               ++D++   + VA ++  ++  +V+
Sbjct: 165 --YPVIDASRRPEEVAADVAELIKRVVR 190


>gi|108804784|ref|YP_644721.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941]
 gi|108766027|gb|ABG04909.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941]
          Length = 203

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           + EG++  GK+T   LL+  L    + V  TREPGGTPAAE  R VLL           E
Sbjct: 2   TVEGLDFCGKSTLARLLEGEL--GGWRVRFTREPGGTPAAERIRGVLLDPRG-AMDPWTE 58

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           A ++AAAR DHV  +I P+L  G+ ++C+RFLDSS AYQG         +  L   +V +
Sbjct: 59  AYLYAAARADHVRRLILPSLERGETVVCERFLDSSLAYQGRGRGLGMEAVRRLNAWAVGD 118

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
           + PD T  L +  +      + R +    A  D  ER       +  + F ++AR +P R
Sbjct: 119 LAPDATFYLRVGAE-----ERARRARASGAPPDRIERSGGAFMRRVEEGFEELARREPGR 173

Query: 188 CHIVDSAHSFQSVATNILNIVWEL 211
             ++D     + +A  +   +  L
Sbjct: 174 VRVLDGTLPPRELAALVAGELRAL 197


>gi|115376927|ref|ZP_01464147.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|310820577|ref|YP_003952935.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|115366038|gb|EAU65053.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|309393649|gb|ADO71108.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 564

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 9/218 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           +FI FEGI+G+GKTT  +LL   L+R+ Y V   RE G   +P A   R       + E 
Sbjct: 1   MFIDFEGIDGSGKTTLSNLLAARLRRQGYKVAHAREGGELQSPIARRVRDFTRDSKLLEM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA  E  +  A     +E VI PAL  G++ + DR+L S  A  G         L    E
Sbjct: 61  GARTEFFLNLARDAQQLEEVISPALCRGEVCISDRYLYSQLALSGGGRGLPLEDLAPACE 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVM---IHEKRRQIFL 178
           ++ + + PD  I++D+  D  L R++ R   ++E    D   RK +    +  + R+ FL
Sbjct: 121 LASKGIWPDLVILVDVEPD--LARLRKRLGKVKEGRNSDGDSRKGLAGAGLSVRVREAFL 178

Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIVWELVQKR 215
           ++AR  P R  ++ ++     ++   I++ V   +++R
Sbjct: 179 EMARKDPARWLVIENNDQPLWALEQRIVDAVLARLERR 216


>gi|51246661|ref|YP_066545.1| thymidylate kinase [Desulfotalea psychrophila LSv54]
 gi|59798232|sp|Q6AJE2|KTHY_DESPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|50877698|emb|CAG37538.1| related to thymidylate kinase [Desulfotalea psychrophila LSv54]
          Length = 202

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G  I FEG +GAGK+T I +L  +L+ K  DV  + EP   P  +  R +      ++
Sbjct: 4   NPGKLIIFEGTDGAGKSTQIKMLANYLRSKGLDVIASFEPTNGPYGQKIRQLYTDR--NK 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +F A R +HV  +I PA+  GKI+LCDR+  S+ AYQG         ++ + 
Sbjct: 62  VTRNEELELFLADRREHVNKLINPAISAGKIVLCDRYYLSTAAYQGA----LGFDVEEIL 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           + +     PD  ++L +PV+ G +R+    S R     D+   +   + EK   IF  ++
Sbjct: 118 QRNSFAPTPDLALLLQIPVEDGRRRIT---SSRGEETNDF---EKAEMLEKVSTIFNSLS 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              P     +++  S  +V  +I+  V +L++
Sbjct: 172 --FP-YIRHINACQSIDNVQRDIIMQVKQLLK 200


>gi|254796905|ref|YP_003081742.1| thymidylate kinase [Neorickettsia risticii str. Illinois]
 gi|254590141|gb|ACT69503.1| thymidylate kinase [Neorickettsia risticii str. Illinois]
          Length = 199

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 20/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GK+T + LL +FL +  Y   +TREPGGTP AE+ R ++L    D    
Sbjct: 1   MFIVFEGIDGSGKSTQVKLLSKFLAKNGYPCVLTREPGGTPFAESLRSMILH---DSIDP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++   AR+DH   VI PAL EGKI++CDRF+ S+ AYQG  +      +  L ++S
Sbjct: 58  MARLLLIVGARVDHYNKVILPALKEGKIVVCDRFIYSTLAYQGYGEKIDLQTILDLHKLS 117

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              V PD T++L               S R+    D FER            +  IA   
Sbjct: 118 GCLVEPDLTLLL-------------SGSGRKKLGRDNFERMPREYLSNVCMGYEKIAHTY 164

Query: 185 PDRCHIVD---SAHSFQSVATNILNIVWE 210
            +  H++       + + +   +   + E
Sbjct: 165 SN-IHVIKRMGVGRTSEEIVKIVQGKISE 192


>gi|307595585|ref|YP_003901902.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429]
 gi|307550786|gb|ADN50851.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429]
          Length = 199

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 13/210 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++ EGI+G GK+T IS+L+R L+   Y V+ T EP  +P     R  LL  G +    
Sbjct: 1   MFVAIEGIDGVGKSTVISMLRRKLEESGYRVYTTAEPSQSPIGRLIRDWLLKPGSNVAHP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++F A R+ H    ++P L  G +++ +R+++S+ AYQG     Q  +L  L    
Sbjct: 61  SIFALLFTADRVQHYYGEVKPMLDSGYLVITERYMESTLAYQGAM-GLQQEWLMELHRFV 119

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD TIILD PVDI + R+++R        L+ FE  +     K R+I L  A   
Sbjct: 120 ---PKPDLTIILDAPVDIVISRLRSR------RELEVFE-VNREFLIKVREILLRRALM- 168

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +   +V++     +V  ++  ++   +++
Sbjct: 169 -NNYPVVNANRDLGAVVDDVYGLIINALRR 197


>gi|300710360|ref|YP_003736174.1| thymidylate kinase [Halalkalicoccus jeotgali B3]
 gi|299124043|gb|ADJ14382.1| thymidylate kinase [Halalkalicoccus jeotgali B3]
          Length = 192

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GK+T    +   LQ    D   TREP  +   EA    +     D    
Sbjct: 1   MLLTLEGLDGSGKST----VHEALQDTYPDAVFTREPTDSWYGEAVARSISDAEAD---P 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS----QHLFLDSL 120
            AE  ++ A   DH+  V+RPAL  GK+++ DR+ DS YAYQG   +        ++  +
Sbjct: 54  LAELFLYTADHADHLSRVVRPALDAGKLVISDRYSDSRYAYQGAALAGAIDRPMEYVRGV 113

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                +   PD TI LD+  + G +R         S   + FE+       + R  +  +
Sbjct: 114 HSPFTRS--PDLTIYLDVDPETGARR---------SGASNKFEQ--SEYLGRVRANYERL 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +P R   +D+  S ++V   +  ++ E++
Sbjct: 161 IDAEPGRFVRIDATRSPETVLDRVEGVLSEVL 192


>gi|11497681|ref|NP_068902.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304]
 gi|6016458|sp|O30175|KTHY_ARCFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|2650584|gb|AAB91163.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304]
          Length = 196

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGKTT  + +   L+ K Y V V +EPG +   +  +        +    
Sbjct: 1   MLIAVEGIDGAGKTTIAAYIAELLKEKGYKVKVLKEPGDSKFGKKIKS-----SEERLSP 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  +F   R       I PAL  G  ++ DR+  S+ AYQ  R     L  +  ++I+
Sbjct: 56  EEELELFLKDREIDARENILPALQSGYAVVMDRYYFSNIAYQSARGIDARLIREMNEKIA 115

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD TI+LD+  +I L+RV+ R  L     LDY          K R+ FL+ A   
Sbjct: 116 ---PKPDLTILLDVEPEIALERVRKRGKLSPFEKLDYL--------RKVRKCFLENAD-- 162

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +   +VD++   + V   +  ++   + 
Sbjct: 163 -ETTVVVDASKPLEEVKEEVRKVIESFLN 190


>gi|126458752|ref|YP_001055030.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
 gi|171855086|sp|A3MSE7|KTHY_PYRCJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|126248473|gb|ABO07564.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548]
          Length = 193

 Score =  187 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 22/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G+GKTT I+ + + L R    V+VTREP G P     +   L  G      
Sbjct: 1   MFIAVEGIDGSGKTTVIAEVAKALPR----VYVTREPSGGPIGRLLKEWALRGGTA--DP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             +A++FAA R++H +  I P L EG I++ +R+++SS AYQG        ++  +  + 
Sbjct: 55  HVDALLFAADRVEHYKREIEPKLREGYIVITERYVESSIAYQGAA-GVPIEYILYINSVV 113

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLDIARN 183
                P  TIILD+     +KR++ R         +  E+ +DV    + R+I+L  AR 
Sbjct: 114 ---PRPHLTIILDVDPAEAIKRIKAR---------ERLEKFEDVEFLRRVREIYLTRARA 161

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +     ++D+      VA +++ I+   +
Sbjct: 162 EG--YPVIDAGRPAGEVAKDVVAIIERAM 188


>gi|327399958|ref|YP_004340797.1| Thymidylate kinase [Archaeoglobus veneficus SNP6]
 gi|327315466|gb|AEA46082.1| Thymidylate kinase [Archaeoglobus veneficus SNP6]
          Length = 190

 Score =  187 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 18/208 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G GKTT    LK  L+++ Y+V + +EP  +      +  L         A
Sbjct: 1   MLIAIEGIDGVGKTTIAKFLKEELEKRGYEVVLLKEPTNSEWGRKIKASL----NKRLSA 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  +F   R  +VE+ I PAL +GKI++ DR+  S+ AYQ  R           +EI+
Sbjct: 57  EEELELFILDRKYNVEHNILPALKQGKIVIMDRYYYSNIAYQAARGLDAERIKRINEEIA 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD  I+LD P +I L+R+  R  +  S        +D    +K R+IF  +    
Sbjct: 117 ---PRPDIVILLDAPPEICLERIMERGEIPNSF-------EDPEYLKKVREIFKSL---- 162

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
            D   IVD++ S   V  ++L IV E +
Sbjct: 163 KDNVVIVDASKSIDEVKKDVLRIVLERI 190


>gi|297526188|ref|YP_003668212.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
 gi|297255104|gb|ADI31313.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710]
          Length = 199

 Score =  187 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 17/211 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G F+  EGI+GAGKT+    L  FL  K + VH T EP  T   EA    L     + 
Sbjct: 4   SNGFFLVLEGIDGAGKTSIAFKLMDFLVEKGFSVHYTYEPYDTLYVEA----LKKKYDEY 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  +A+ +AA RL H+   I P L  G +++CDR+  SS AYQ      Q   ++ + 
Sbjct: 60  RDAYLDALTYAADRLVHIRTDILPYLRRGYVVICDRYYYSSAAYQSA----QGAPIEWVL 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           EI+   + PD TI LD+   IG+KR       RE     + E + +    K R+ +L + 
Sbjct: 116 EINKYALKPDLTIYLDVDPHIGVKR-------REGLNTRFPEYEKLDFLYKVRENYLWLV 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +       +VD+   F  V  ++  IV+E +
Sbjct: 169 KK--GYMVLVDANREFDKVYRDVEKIVFEHI 197


>gi|108758316|ref|YP_631609.1| thymidylate kinase [Myxococcus xanthus DK 1622]
 gi|50404253|gb|AAT76867.1| serine/threonine kinase Pkn2 associate protein 1 [Myxococcus
           xanthus]
 gi|108462196|gb|ABF87381.1| thymidylate kinase [Myxococcus xanthus DK 1622]
          Length = 221

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 19/219 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCG 58
           G FI  EG++GAG TT +  L   L+ + + V  TREP   P     R  L     L  G
Sbjct: 14  GRFIVLEGLDGAGTTTQVERLAAALRAEGHSVLTTREPSDGPVGTMIRQALTGRLGLPGG 73

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 E  A++FAA R DH+   + PAL  G+I+LCDR++ SS AYQG       L ++
Sbjct: 74  AGPLAPETLALLFAADRTDHLTARVLPALAAGQIVLCDRYVLSSLAYQGAS-----LPME 128

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            ++ ++   V PD T+ + +  ++  +R + R    E    D           +  + ++
Sbjct: 129 WVEAVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEAD-------EAQRRIAKQYV 181

Query: 179 D--IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                R + +R   +D     ++V    L  + +L+ ++
Sbjct: 182 AAIRRREKHERIVHIDGEQGIEAVTAASLVEIRKLLARK 220


>gi|292656335|ref|YP_003536232.1| thymidylate kinase [Haloferax volcanii DS2]
 gi|291370107|gb|ADE02334.1| thymidylate kinase [Haloferax volcanii DS2]
          Length = 197

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 22/215 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63
           + ++ EG++G+GKTT    L         D   TREP   +   EA    +   G D   
Sbjct: 1   MLVTLEGLDGSGKTTVWEALHD----AYPDAVFTREPTSDSWYGEAVNRAIDDDGAD--- 53

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQ 121
             A   +F A   DH+  V+RPAL +GK+++ DR+ DS YAYQ    RDS     ++ ++
Sbjct: 54  PLATLFLFTADHADHLSRVVRPALADGKLVVSDRYSDSRYAYQAAALRDSDLRRPMEYIR 113

Query: 122 EISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            I       PD TI LD+  +    R         S   + FE+         R+ +  +
Sbjct: 114 GIHTAFTRPPDKTIYLDVDPETAAAR---------SGATNKFEQ--AAYLADVRENYERL 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +P+R   +D+  S + V   +   +  ++ ++
Sbjct: 163 VEAEPERFVRIDATQSPEDVLDAVEAALEAILAEQ 197


>gi|195952508|ref|YP_002120798.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932120|gb|ACG56820.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1]
          Length = 200

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 20/210 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +     I FEGI+G+GK+T I+++   L+ +N  V + REPG T   E  R +L S    
Sbjct: 6   IQKPYIIVFEGIDGSGKSTQINIVYELLKYEN--VKLLREPGSTEMGEKIRDILKSQ--- 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + +  +  A+R   +E   +    EG ILL DR++ S+ AYQG        FL +L
Sbjct: 61  KLDPKTQTFLIEASRAHMIEKHFKGF--EG-ILLLDRYIYSTIAYQGYGFGIDINFLKAL 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +      +PD   + D+     L+R++           D FE  D+   +K R  +L +
Sbjct: 118 NDFVCDIYIPDIVFLFDIDPRTALERLK--------REKDMFE--DLEFLKKVRDGYLKL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           A+      + +D++ + +++   I NI+  
Sbjct: 168 AKEY--NFYTIDASKNVEAITNEITNILKR 195


>gi|76801882|ref|YP_326890.1| thymidylate kinase [Natronomonas pharaonis DSM 2160]
 gi|121695514|sp|Q3IRB3|KTHY_NATPD RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|76557747|emb|CAI49330.1| thymidylate kinase [Natronomonas pharaonis DSM 2160]
          Length = 196

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 22/214 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G+GK+T  + L+  L  +  +   TREP  +    A    +   G  +   
Sbjct: 1   MLITLEGIDGSGKSTAHAALRERLTAE--ETTFTREPTDSWYGSAVERSI---GDADADP 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----SQHLFLDSL 120
            AE  ++ A   DH+  V+RPAL  G+ ++ DR+ DS YAYQG            ++  +
Sbjct: 56  LAELFLYTADHADHLSRVVRPALEAGEPVVSDRYSDSRYAYQGATLEGVIDEPMAYVKRV 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E   +   PD T+  D+P  +G +R             + FE  D    E  R+ +  +
Sbjct: 116 HEPFTRP--PDATLYFDVPPTVGAERA---------GATNKFEAAD--YLESVRENYERL 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              +P+R H +D+  S  +V    +  V  L+ +
Sbjct: 163 IEAEPERFHRIDATQSESAVVEAAVETVETLLSR 196


>gi|147919740|ref|YP_686514.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I]
 gi|110621910|emb|CAJ37188.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I]
          Length = 208

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  IS EGI+GAGK+T I +L+R++Q +  +  + +EP  G    E AR  +     +
Sbjct: 5   KKGFLISIEGIDGAGKSTQIKMLQRWMQDRKIEHVILKEPTAGQYGREIARRAI---AHE 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E E  +F   R + VE  I PAL  GK+++ DR+  S+ AYQG R        +  
Sbjct: 62  ATSTEEELWLFMEDRKEDVEKNILPALRAGKVVVMDRYYQSNIAYQGARGLDTEKIREEN 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I+LD+    GL R+ N+      + LD FE++     +K R IFLDI
Sbjct: 122 ERF---SPRPDLVIVLDIDPARGLSRIVNQ----RKSQLDAFEKE--EYLQKVRNIFLDI 172

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            R       I+ +  S + V   I+  + E +
Sbjct: 173 GRQPNG--VIISADQSPEKVHQEIVKAIEERL 202


>gi|322368399|ref|ZP_08042968.1| thymidylate kinase [Haladaptatus paucihalophilus DX253]
 gi|320552415|gb|EFW94060.1| thymidylate kinase [Haladaptatus paucihalophilus DX253]
          Length = 197

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 24/214 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT   +L         D   TREP  +   EA    +     D+  +
Sbjct: 1   MLLTLEGLDGSGKTTVWEVLHEEFP----DAVFTREPTDSWYGEAVNRSI---EDDDADS 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEI 123
            AE  ++ A    H+ + +RPAL EGK+++ DR+ DS YAYQ    D      ++ +  I
Sbjct: 54  VAELFLYTADHAAHLADTVRPALEEGKLVISDRYSDSRYAYQAVALDGVVSRPMEYI--I 111

Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            V +     PDCTI LD+  + G  R         S   + FE+       + +  +  +
Sbjct: 112 GVHKPWTRPPDCTIYLDVDPETGAAR---------SGATNKFEQAG--FLAQVQSNYERL 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              +P R   VD+  S + V  ++++ +  + + 
Sbjct: 161 MDAEPGRFVRVDATQSPEDVIESVVSTIERVTED 194


>gi|284163929|ref|YP_003402208.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511]
 gi|284013584|gb|ADB59535.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511]
          Length = 205

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 25/216 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63
           + ++ EG++G+GKTT    +   LQ +  D   TREP   +   +A    +     D   
Sbjct: 1   MLVTLEGLDGSGKTT----VWEALQERYPDAVFTREPTNDSWYGDAVYRSIRDDDADSL- 55

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE 122
             AE  ++ A   DH+  VI PAL  G ++L DR+ DS +AYQG   ++S  L +D   E
Sbjct: 56  --AELFLYTADHADHLSRVIEPALEAGDLVLSDRYSDSRFAYQGATLEASDRLAVDDHLE 113

Query: 123 ISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             V       + PD TI LD+  +   +R             + FER  V   E  R  +
Sbjct: 114 YVVDVHEPFSIPPDLTIYLDVDPETAAERA---------GATNKFER--VDYLESVRDNY 162

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             +   +PDR   +D+     +V   +L  +   ++
Sbjct: 163 ERLLEREPDRFVRIDATQEPDAVLEAVLGTLESALE 198


>gi|195867423|ref|ZP_03079427.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|195660899|gb|EDX54152.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
          Length = 230

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSC 57
             GLFI FEGI+GAGKT+ +  L   L+       + +TREPGG    AAE  R   L  
Sbjct: 14  KKGLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK- 72

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            ++ F     A ++A++R +HV+  I P L +G I++ DRF+ SSY YQG   +     +
Sbjct: 73  NLEAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVI 132

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             + + ++  +  D     D+ V+  L R++NR+        + F+ ++   +EK  + +
Sbjct: 133 HHVNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQY 187

Query: 178 LDI--ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +  A NQP +   +D+  S   V   +   + E+ ++ 
Sbjct: 188 PSVFNAYNQPKKIIFIDANKSENEVLCEVKERLLEIFKEH 227


>gi|262277219|ref|ZP_06055012.1| thymidylate kinase [alpha proteobacterium HIMB114]
 gi|262224322|gb|EEY74781.1| thymidylate kinase [alpha proteobacterium HIMB114]
          Length = 212

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 8/206 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+FEGIEG+GK+T I+ + +FL+++      TREPGGT  AE  R +++    +  
Sbjct: 5   KGNLITFEGIEGSGKSTQINEVYKFLKKRKIKCIKTREPGGTRLAEKIRKIIIKDLKNNE 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR +H   + +  + +G ++LCDR++DS+YAYQ          ++ LQ 
Sbjct: 65  DNLTELLLLFAARSNHFLKIKK-LIKKGYLVLCDRYIDSTYAYQHYEQGQDIKLINFLQN 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  ++  P  T  +D+PV     RV+ R        LD F++       K R+ F+++ +
Sbjct: 124 LISKKSFPKITFFIDIPVKTSKSRVKGR------GRLDRFDKYGEKKLNKLRKSFINLKK 177

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
              +R  ++D   + + +   I+N +
Sbjct: 178 KH-NRIIMIDGTKNKKDITIQIVNYL 202


>gi|167972275|ref|ZP_02554552.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|167974298|ref|ZP_02556575.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|167975305|ref|ZP_02557582.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|167988964|ref|ZP_02570635.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|168362382|ref|ZP_02695561.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|198273573|ref|ZP_03206109.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554298|ref|YP_002284433.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550427|ref|ZP_03771376.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
 gi|225551319|ref|ZP_03772265.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
 gi|171903215|gb|EDT49504.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209431|gb|EDU06474.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018690|gb|EDU56730.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188998196|gb|EDU67293.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660019|gb|EDX53399.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198250093|gb|EDY74873.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541799|gb|ACI60028.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379134|gb|EEH01499.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
 gi|225379581|gb|EEH01943.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
          Length = 229

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 12/220 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSC 57
             GLFI FEGI+GAGKT+ +  L   L+       + +TREPGG    AAE  R   L  
Sbjct: 13  KKGLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK- 71

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            ++ F     A ++A++R +HV+  I P L +G I++ DRF+ SSY YQG   +     +
Sbjct: 72  NLEAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVI 131

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             + + ++  +  D     D+ V+  L R++NR+        + F+ ++   +EK  + +
Sbjct: 132 HHVNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQY 186

Query: 178 LDI--ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +  A NQP +   +D+  S   V   +   + E+ ++ 
Sbjct: 187 PSVFNAYNQPKKIIFIDANKSENEVLCEVKERLLEIFKEH 226


>gi|163795500|ref|ZP_02189466.1| Thymidylate kinase [alpha proteobacterium BAL199]
 gi|159179099|gb|EDP63632.1| Thymidylate kinase [alpha proteobacterium BAL199]
          Length = 178

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 5/177 (2%)

Query: 37  VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           +TREPGG+P AEA R +L++     + A  EA++  AAR DH+   IRPAL +G+ ++CD
Sbjct: 2   LTREPGGSPGAEAIRTLLVTGEPGRWDAVTEAMLMNAARRDHLIRTIRPALAKGQWVICD 61

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           RF+DS+ AYQG         L++L E +V++  PD T++LDL  + GL R        E+
Sbjct: 62  RFIDSTLAYQGYAGGVPLATLEALIEAAVEDTRPDLTLVLDLAPETGLARTLRGSDGTEA 121

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELV 212
                FERK +  H   R  FL IA    DRC  VD+       +A  +   V E +
Sbjct: 122 ----RFERKGLAFHAAVRDGFLRIATANLDRCVTVDAGTLPEGLIARAVAAAVSERL 174


>gi|312137024|ref|YP_004004361.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
 gi|311224743|gb|ADP77599.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
          Length = 189

 Score =  184 bits (467), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 23/211 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I  EGI+GAGK+  + LL   L++  Y V   +EP  +   +  R +L     +    
Sbjct: 1   MYICIEGIDGAGKSLQVKLLSEKLKKCGYKVIQIKEPTDSEIGKLIRKLLRKEVNNAL-- 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++FAA R+  +   I+  L +G +++ DR L SS+ YQ           D ++E++
Sbjct: 59  --MTLLFAADRII-LSEKIKKLLKKGYLVISDRCLWSSFVYQSIDIGE-----DWVEEVN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD TI LD+ VD+ +KR + +     S+ L+           K R+ +L +A+  
Sbjct: 111 KYALKPDITIFLDVDVDVAMKRCEKKEIFENSSYLN-----------KARRKYLQLAKKH 159

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                I+D+ +  ++V   IL ++   +QK+
Sbjct: 160 --NFIIIDANNDIKTVHNEILKVIAAKIQKK 188


>gi|320100889|ref|YP_004176481.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
 gi|319753241|gb|ADV64999.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162]
          Length = 204

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 20/222 (9%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+  G FI  EG++GAGKTT    L   L+ + +    T EP  +   +A + +      
Sbjct: 1   MHGKGYFIVLEGLDGAGKTTVAHRLVEELESRGFPAIYTYEPTDSEIVKAVKSIY----S 56

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D   A  +A+ FA  RL HV+++++P + +G  ++ DR+  SS AYQ           D 
Sbjct: 57  DLRDAYIDALAFALDRLIHVKSLVKPFIEKGVTVVSDRYFYSSVAYQSASG----APFDW 112

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178
           + E++   + PD  I LD+  + GL R        ++     F E +      + R+ ++
Sbjct: 113 ILEVNKYALKPDVAIYLDVDPEEGLSR--------KTTSTSRFPEYEKKEFLHRVREAYV 164

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
            +   +      VD++     V   + +IV  ++ +  +P  
Sbjct: 165 RMV--EIGLLTRVDASRPLGEVYAEVWSIVQGVIGRGHAPRG 204


>gi|219852653|ref|YP_002467085.1| thymidylate kinase [Methanosphaerula palustris E1-9c]
 gi|219546912|gb|ACL17362.1| dTMP kinase [Methanosphaerula palustris E1-9c]
          Length = 209

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 19/221 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+ EGI+GAGK++ +  LK  L     D   TREPG T   E+ R  +     +E    
Sbjct: 3   LITIEGIDGAGKSSLVRRLKHSLAD--LDPIFTREPGSTWIGESVRRGI----AEEIDPV 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----SQHLFLDSLQ 121
           AEA++FAA    H+  VIRP L + ++++ DR++DS YAYQ             +L  + 
Sbjct: 57  AEALLFAADHAAHIARVIRPGLAKNRVIISDRYVDSRYAYQSVMLKGVLPDPGTWLRQVH 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD T ++ LPV   L R+      R     ++FE+  V+  E  +Q +L +A
Sbjct: 117 Q--HWSIAPDLTFLMVLPVGTALARI-----TRGRPKKEHFEQTAVL--EAVQQQYLALA 167

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           R +P R  ++D+      V   +   + E V++      S 
Sbjct: 168 RAEPSRFVVIDAELDLAEVHHFMDQTIREAVRRNAGSSRSH 208


>gi|84489171|ref|YP_447403.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
 gi|121696579|sp|Q2NHE3|KTHY_METST RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|84372490|gb|ABC56760.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091]
          Length = 195

 Score =  183 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 17/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I  EGI+G GKTT    LK +L+++ + V    EP  +   +  R  LL         
Sbjct: 1   MYIVLEGIDGVGKTTQTEKLKEWLEKRGFSVKTIVEPTDSDIGKIIREELLKPEATSDTN 60

Query: 65  EAE-AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +   A++FAA RL   + + +    + KIL+ DR   SS  YQ    +S  +  + + +I
Sbjct: 61  QQMLALLFAADRLTLKDEINQVKNNQQKILISDRSFYSSITYQ----NSTTIEPEWIYKI 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD TIILD+  D  LKR            +D FE K     EK R+ +L + + 
Sbjct: 117 NKHTPRPDLTIILDIDEDEALKRCDK---------IDTFENK--EFLEKTRENYLKLVKT 165

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + +    +D+  +   V   I N + + ++
Sbjct: 166 EKN-IVKIDATPTEDVVQDEIRNQIIKYLK 194


>gi|320354474|ref|YP_004195813.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032]
 gi|320122976|gb|ADW18522.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032]
          Length = 206

 Score =  182 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G+ I+FEGI+G GK+T + LL  +L+ + Y V  TREP   P  +  R  LL     
Sbjct: 1   MSGGILIAFEGIDGTGKSTQLPLLAAYLRGQGYTVVETREPTDGPYGQQIR--LLYRNRH 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E E  +F   R  HVE  I+PAL  G I+L DR+  S+ AYQG             
Sbjct: 59  QASPEQELELFLLDRRQHVEQCIKPALARGAIVLTDRYYFSTAAYQGAAGCDPAAI---- 114

Query: 121 QEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              +       PD  ++L       + R++          L+ FE+++ +  EK   +F 
Sbjct: 115 --FARHGFAPEPDLVLLLTQTPSESVTRIRE----LRGEMLNDFEQQEQL--EKVAALF- 165

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             A    D    + +A +   V  +I   V +L+ ++
Sbjct: 166 --ASFTHDCIVRIHAARTVAEVHASIREAVAQLLAQK 200


>gi|110669030|ref|YP_658841.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790]
 gi|109626777|emb|CAJ53245.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790]
          Length = 213

 Score =  182 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 27/222 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++   I+ EG++G+GK+T    L+  L     +V  TREP  +   +       S   D
Sbjct: 11  MST--LITLEGLDGSGKSTVCESLQSALP----EVTFTREPTDSWYGDLVTE---SMHDD 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-----RDSSQHL 115
              + AE  +F A    H+  VIRP+L  G  ++ DR+ DS +AYQ       R  +   
Sbjct: 62  SADSLAELFLFTADHAAHLNRVIRPSLASGTAVISDRYADSRFAYQAAALADSRIDAPLE 121

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++ S+ E   +   PD T+ LD+  + G+ R             + FER  V   E+   
Sbjct: 122 YIQSIHEPFSR--RPDATVYLDIDPETGVTRA---------GATNKFER--VQYLERVAT 168

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +  +   +P R + VD++ S   V   +  IV  ++   VS
Sbjct: 169 QYERVIAAEPTRFYRVDASQSIADVKKRVKTIVGTMLGDEVS 210


>gi|257052374|ref|YP_003130207.1| thymidylate kinase [Halorhabdus utahensis DSM 12940]
 gi|256691137|gb|ACV11474.1| thymidylate kinase [Halorhabdus utahensis DSM 12940]
          Length = 199

 Score =  182 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 20/215 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G+GK++    L+      + D   TREP  +   EA +  +     D    
Sbjct: 1   MLITLEGIDGSGKSSAWESLREHAADLDPDFTFTREPTESWYGEAVQRSIQEDDADSL-- 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE----RDSSQHLFLDSL 120
            AE  ++ A    H+ N ++PAL  G++++ DR+ DS YAYQG     R      F+  +
Sbjct: 59  -AELFLYTADHAAHLANTVQPALDRGEVVVSDRYSDSRYAYQGATLEDRLDDPLAFVREI 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E   +   PD TI LD+  + G +R         S   + FER  V      R  +  +
Sbjct: 118 HEPWTRP--PDATIYLDVDAETGAER---------SGGTNKFER--VEHLRAVRANYERL 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             + PDR   +D+  + ++V  ++ + V  L+ ++
Sbjct: 165 IDDDPDRFVRIDATRAAEAVRADVFDAVERLLSEQ 199


>gi|269986146|gb|EEZ92459.1| dTMP kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 200

 Score =  182 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 15/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI  EGI+ AGK T   LL   ++ K + V +T+EP        ++  L        
Sbjct: 2   KGKFIVIEGIDNAGKGTQSVLLAEHIRSKGFKVILTKEPTNGILGGISKAAL--NKELNL 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +A  ++F A R  H+E  I PA+ +G I++CDR+  S+ AY      + ++    L+ 
Sbjct: 60  SNKALQLLFCADRAHHLETEIEPAMRDGFIVICDRYFFSTLAY----GFASNINYKWLRS 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++V    PD  I LDL     L R +    +      D  E+       K RQ +L IA+
Sbjct: 116 VNVSFRKPDLGIYLDLDPKTSLSRAKK--QVDGLQLFDNLEKIS-----KVRQAYLSIAK 168

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                   +D+    + V+  I  I+ +    +V
Sbjct: 169 EFH--IKKIDAKGDVEVVSQRINKIIDKFFNIKV 200


>gi|288932600|ref|YP_003436660.1| thymidylate kinase [Ferroglobus placidus DSM 10642]
 gi|288894848|gb|ADC66385.1| thymidylate kinase [Ferroglobus placidus DSM 10642]
          Length = 204

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 19/212 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+ EGI+GAGKTT  + ++  L +      V +EP      +  +          F  E
Sbjct: 3   LIAVEGIDGAGKTTIANFVREELLKLGIPAIVLKEPTEGKYGKIIKE-----SEKRFDPE 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E  +F   R + VE  I PAL +G  ++ DR+  SS AYQG R       L   + I+ 
Sbjct: 58  KELELFILDRKEDVEKNILPALNKGISVIMDRYYYSSVAYQGARGLDPEEILKVNESIA- 116

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
              +PD TIILD+  +I LKR++NR  L           +++   +K R+IFL I R + 
Sbjct: 117 --PVPDLTIILDVEPEIALKRIKNRKKLTPF--------EELEYLKKVREIFLSIKRPE- 165

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
               +VD++ S + V   ++  V EL+  R S
Sbjct: 166 --IRVVDASKSLEEVKDEVIYHVLELLSSRGS 195


>gi|289808796|ref|ZP_06539425.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
 gi|289829610|ref|ZP_06547165.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
          Length = 160

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 7/164 (4%)

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           + S G +    +AE ++F AAR+  VE VI+PAL +G  ++ DR   S+ AYQG      
Sbjct: 4   IRSVGDEVITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGID 63

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              L +L++  + +  PD T+ LD+  ++GLKR + R        LD  E++      + 
Sbjct: 64  QTMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRT 117

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           R  +L++A     R   +D+     +V  +I   V + VQ++ +
Sbjct: 118 RARYLELAAQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 160


>gi|289582282|ref|YP_003480748.1| thymidylate kinase [Natrialba magadii ATCC 43099]
 gi|289531835|gb|ADD06186.1| thymidylate kinase [Natrialba magadii ATCC 43099]
          Length = 199

 Score =  181 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFGA 64
            ++ EG++G+GKTT    L+        D   TREP   +   +A    +     D+  +
Sbjct: 4   LVTLEGLDGSGKTTVWEALQDT----YPDAVFTREPTNDSWYGDAVYRSI---EDDDADS 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  ++ A   DH+   I PAL  G +++ DR+ DS YAYQG   +      + L+ + 
Sbjct: 57  LAELFLYTADHADHLSRKIEPALERGDLVISDRYADSRYAYQGATLAETGRIAEPLEYVV 116

Query: 125 ----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD TI LDL  +   +R             + FE       E  R+ +  +
Sbjct: 117 DVHEPFSIEPDLTIYLDLDPETAARRA---------GSTNKFEH--AAYLESVRENYDLL 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           A    DR   VD+  S +SV   + +++   +++
Sbjct: 166 AERYADRFVRVDATQSPESVLETVRSVLATALEE 199


>gi|305663476|ref|YP_003859764.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
 gi|304378045|gb|ADM27884.1| thymidylate kinase [Ignisphaera aggregans DSM 17230]
          Length = 203

 Score =  180 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 25/219 (11%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M     GLFI  EGI+GAGKTT   +L   L+R  Y    T EP  T   E  + +    
Sbjct: 1   MTKAGMGLFIVLEGIDGAGKTTIAKMLLDDLERNGYRTIYTFEPWTTRFVEDLKSL---- 56

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                 A  +A+++AA RL HV+ VI PA+ +G I++CDR+  SS AYQ        + +
Sbjct: 57  -GMRRDAYIDALIYAADRLVHVKEVIEPAIRDGYIVVCDRYFYSSVAYQSAMG----VPM 111

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQI 176
           D +  +++  + PD  I LD+  +IG+ R +             F E ++  I  K R+I
Sbjct: 112 DWIITLNMFALKPDLAIYLDVEPEIGIARKR--------GYKSRFPEYEEYGILRKAREI 163

Query: 177 FLDIARNQPDRCHI-VDSAHSFQSVATNILNIVWELVQK 214
           +L++ R       + + +      V  ++ NIV+  +++
Sbjct: 164 YLEMVRRN---MLVYIYAGRDIGDVYRDVRNIVYRAIEQ 199


>gi|290558929|gb|EFD92316.1| dTMP kinase [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 205

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G FI  EGI+ AGK T  +LL + L+     V +T+EP        ++  L      
Sbjct: 1   MN-GKFIVIEGIDNAGKGTQSTLLTQHLRENGLKVVLTKEPTNGILGGLSKAAL--NKEI 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F A R  H+E  I P + +G  ++CDR+  S+ AY         +    L
Sbjct: 58  NISGRALQLLFCADRAHHIETEIEPMMSKGLTVICDRYFFSTLAY----GFVSGINYKWL 113

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +++    PD  I LDL   + L R+  +  ++    +            K RQ ++ I
Sbjct: 114 RSVNINFRKPDLGIYLDLDPKVSLSRMPKQDGIQLFDTIQKI--------SKVRQAYISI 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           ++        VD+  S   V+  I  IV + + 
Sbjct: 166 SKEFH--LKKVDANGSVSEVSQKINKIVDKFLN 196


>gi|222457907|gb|ACM61840.1| thymidylate kinase [Yersinia pseudotuberculosis]
          Length = 178

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 8/160 (5%)

Query: 36  HVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
            + REPGGTP AE  R ++      +    +AE ++  AAR+  VENVI+PAL  G  ++
Sbjct: 26  FLPREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVV 85

Query: 95  CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
            DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL R + R    
Sbjct: 86  GDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR---- 141

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
               LD  E++ +   E+ R  +L++A +       +D++
Sbjct: 142 --GELDRIEQESLAFFERTRARYLELAASDAS-IKTIDAS 178


>gi|212213017|ref|YP_002303953.1| thymidylate kinase [Coxiella burnetii CbuG_Q212]
 gi|212218894|ref|YP_002305681.1| thymidylate kinase [Coxiella burnetii CbuK_Q154]
 gi|215918975|ref|NP_819533.2| thymidylate kinase [Coxiella burnetii RSA 493]
 gi|206583860|gb|AAO90047.2| thymidylate kinase [Coxiella burnetii RSA 493]
 gi|212011427|gb|ACJ18808.1| thymidylate kinase [Coxiella burnetii CbuG_Q212]
 gi|212013156|gb|ACJ20536.1| thymidylate kinase [Coxiella burnetii CbuK_Q154]
          Length = 161

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 8/163 (4%)

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               + E ++  A R  ++ +V+ PAL  G+ +L DRF D+S+AYQG         ++ L
Sbjct: 1   MMCPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEEL 60

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +  + PD T++LD PV +GL RV++R         D  E + +   ++ R+ +L +
Sbjct: 61  AGWVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLAL 114

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           A  +P R  ++ +     +V   I+  +  L+    SPL  +K
Sbjct: 115 ANQEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 155


>gi|222480299|ref|YP_002566536.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239]
 gi|254808298|sp|B9LQ28|KTHY_HALLT RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|222453201|gb|ACM57466.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239]
          Length = 197

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EG++G+GKTT    L         D   TREP  +   EA    +     D+   
Sbjct: 1   MLITLEGLDGSGKTTVWEALHDV----YPDATFTREPTDSWYGEAVDRSI---AADDADP 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEI 123
            AE  +  A   DH+   I PAL +G +++ DR+ DS +AYQ    ++  + +D  L+ I
Sbjct: 54  LAELFLLTADHADHLSGTIEPALADGDLVISDRYSDSRFAYQAATLAASDVDIDRPLEYI 113

Query: 124 ----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               +     PD TI LDL      +R             + FE+         R+ +  
Sbjct: 114 KGIHAAFSRPPDATIYLDLDAREAAERA---------GRTNKFEQDG--YLAAVRKNYER 162

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   +PDR   +D++ S ++V   +  ++ EL+ +
Sbjct: 163 LIDAEPDRFVRIDASQSPEAVIARVEEVLSELLGE 197


>gi|197294219|ref|YP_001798760.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|197294324|ref|YP_001798865.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|197294822|ref|YP_001799363.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853546|emb|CAM11406.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853651|emb|CAM11530.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171854149|emb|CAM12141.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     
Sbjct: 1   MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + + ++  A  +   + +I PAL+ G ++L DR+ DS++AYQ + +   +    + 
Sbjct: 58  KISPKTKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+   + P  T  LD+   IGLKR Q + + +    LD  E+K +   +  R  +L+ 
Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173

Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
            +       +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|296109540|ref|YP_003616489.1| thymidylate kinase [Methanocaldococcus infernus ME]
 gi|295434354|gb|ADG13525.1| thymidylate kinase [Methanocaldococcus infernus ME]
          Length = 184

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 27/207 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT   +L + L       + T EP         R  L S  +D    
Sbjct: 1   MFIVFEGIDGSGKTTLSKMLAKELSG-----YWTCEPTDGEIGRLIRSYLSSGNIDNISL 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              +++FAA R++H +  I   L  G+ ++CDR+L SS AYQ      +    + L EI+
Sbjct: 56  ---SLLFAADRVEHCKE-IEKVLNSGRDVICDRYLYSSIAYQSSLGVEE----NFLWEIN 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   +L + VD  +KRV+ +         D FE K+    EK ++ +L++A+  
Sbjct: 108 KYAIKPDLVFLLVVDVDEAMKRVKGK---------DIFENKN--FLEKVQEKYLELAKRF 156

Query: 185 PDRCHIVDSAH-SFQSVATNILNIVWE 210
                ++D+ + S +     +   V+E
Sbjct: 157 --NFIVIDTTNISIEEAYNKVRVKVYE 181


>gi|13357576|ref|NP_077850.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|6898965|gb|AAF30425.1|AE002101_8 thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
          Length = 233

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 12/221 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLS 56
           +  GLFI FEGI+GAGKT+ +  L   L+       + +TREPGG    AAE  R   L 
Sbjct: 16  LKKGLFIVFEGIDGAGKTSILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREFFLK 75

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             ++ F     A ++A++R +HV+  I P L +  I++ DRF+ SSY YQG   +     
Sbjct: 76  -NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQGIVQNQSLDV 134

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  + + ++ E+  D     D+ V+  L R++NR+        + F+ ++   +EK  + 
Sbjct: 135 IYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQ 189

Query: 177 FLDIAR--NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +  + +  NQP +   +D+  +   V   +   + ++ ++ 
Sbjct: 190 YPSVFKVYNQPKKIIFIDANKNENEVLCEVKEQLLKIFKEH 230


>gi|313125419|ref|YP_004035683.1| thymidylate kinase [Halogeometricum borinquense DSM 11551]
 gi|312291784|gb|ADQ66244.1| thymidylate kinase [Halogeometricum borinquense DSM 11551]
          Length = 199

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 21/214 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EG++G+GKTT    L         D   TREP  +   +A      S   ++  +
Sbjct: 1   MLITLEGLDGSGKTTAWEALHDV----YPDAVFTREPTESWYGDAVYR---SMSDEDADS 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQE 122
            AE  +F A   DH+  V+RPAL + K+++ DR+ DS +AYQ     D+     LD ++ 
Sbjct: 54  LAELFLFTADHADHLSRVVRPALADDKLVISDRYSDSRFAYQAATLEDADLRRPLDYIRG 113

Query: 123 I-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           I +     PD TI LD+  +    R             + FER       + +  +  + 
Sbjct: 114 IHAAFSRPPDATIFLDVDPETAAARA---------GATNKFERAS--YLREVKANYERLI 162

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +P+R   +D+    + V   +   V  L+ + 
Sbjct: 163 DAEPERFVRIDATQPPEDVVEMVERSVERLLSEH 196


>gi|167971144|ref|ZP_02553421.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|170762140|ref|YP_001752100.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171916060|ref|ZP_02931503.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|183508501|ref|ZP_02958029.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|14285521|sp|Q9PRC5|KTHY_UREPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|189030845|sp|B1AI06|KTHY_UREP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|168827717|gb|ACA32979.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171902601|gb|EDT48890.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|182675929|gb|EDT87834.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186700962|gb|EDU19244.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 230

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 12/221 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLS 56
           +  GLFI FEGI+GAGKT+ +  L   L+       + +TREPGG    AAE  R   L 
Sbjct: 13  LKKGLFIVFEGIDGAGKTSILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREFFLK 72

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             ++ F     A ++A++R +HV+  I P L +  I++ DRF+ SSY YQG   +     
Sbjct: 73  -NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQGIVQNQSLDV 131

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  + + ++ E+  D     D+ V+  L R++NR+        + F+ ++   +EK  + 
Sbjct: 132 IYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQ 186

Query: 177 FLDIAR--NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +  + +  NQP +   +D+  +   V   +   + ++ ++ 
Sbjct: 187 YPSVFKVYNQPKKIIFIDANKNENEVLCEVKEQLLKIFKEH 227


>gi|197294197|ref|YP_001798738.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853524|emb|CAM11374.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     
Sbjct: 1   MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + + ++  A  +   + +I PAL+ G ++L DR+ DS++AYQ + +   +    + 
Sbjct: 58  KISPKTKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+   + P  T  LD+   IGLKR Q + + +    LD  E+K +   +  R  +L+ 
Sbjct: 118 KIINYFLIKPKLTFYLDIDPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173

Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
            +       +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|197294352|ref|YP_001798893.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|197294409|ref|YP_001798950.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853679|emb|CAM11562.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853736|emb|CAM11659.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     
Sbjct: 1   MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + + ++  A  L   + +I PAL+ G ++L DR+ DS++AYQ + +   +    + 
Sbjct: 58  KISPKTKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+   + P  T  LD+   IGLKR Q + + +    LD  E+K +   +  R  +L+ 
Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173

Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
            +       +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|163755232|ref|ZP_02162352.1| thymidylate kinase [Kordia algicida OT-1]
 gi|161324652|gb|EDP95981.1| thymidylate kinase [Kordia algicida OT-1]
          Length = 206

 Score =  178 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 14/216 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +FI+ EGI+G+GK+T    + + L+ + + V++T EP      +  R +L   G +
Sbjct: 1   MKKNIFIAIEGIDGSGKSTQAKNIAKRLEAEGHKVYLTFEPTDMRIGKMIRSIL--GGQE 58

Query: 61  EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +   +  A +F A RLDH+    N I   L EG  ++ DR+  SSYAY G        ++
Sbjct: 59  KADEKVIAALFVADRLDHILHETNGILKKLAEGYTVITDRYYFSSYAYHGA--HMDMDWV 116

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQI 176
               +++   + P   I +D+  ++ +KR+  NR ++     LD        +  +  Q 
Sbjct: 117 IQSNKMAADILKPTVNIFVDVSPEVAMKRINANRETVEIYETLDNL----KAVQSQYLQA 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           F  +     +    V+   + ++V   + NI+ + +
Sbjct: 173 FKKL--QHEENIVKVNGDETPENVTEALWNIIQQEL 206


>gi|289192999|ref|YP_003458940.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
 gi|288939449|gb|ADC70204.1| thymidylate kinase [Methanocaldococcus sp. FS406-22]
          Length = 185

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 27/208 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT   LL   L     +   T EP  +      R +L   G  +   
Sbjct: 1   MFIVFEGIDGSGKTTQSKLLAEKL-----NAFWTYEPSDSEIGRFIREIL--SGNVKVDN 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  A++FAA R++H   +I+  L + + ++CDR+L SS AYQ         F+ S+   +
Sbjct: 54  KTLALLFAADRVEH-TKLIKEELKK-RAVVCDRYLYSSIAYQSVA-GVDENFIKSINRYA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   +L + ++  LKRV+ +         D FE+KD    EK +  +L++A   
Sbjct: 111 ---LEPDIVFLLVVDIETALKRVKTK---------DIFEKKD--FLEKVQNKYLELAEEY 156

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWEL 211
                ++D+   S + V   ILN +  L
Sbjct: 157 --NFIVIDTTKKSVKVVHEEILNYLKSL 182


>gi|296126817|ref|YP_003634069.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
 gi|296018633|gb|ADG71870.1| thymidylate kinase [Brachyspira murdochii DSM 12563]
          Length = 203

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 20/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I  EGI+G+GK+TH  LL   L         T EP         R  +LS    
Sbjct: 1   MN-GKLIVIEGIDGSGKSTHGMLLTNELNNIGIKSIYTFEPTHAYFGSKLRESMLSKD-- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E E  +F A R +HV+N+I+PA+ +G  ++ DR++ SS AYQG +      ++ +L
Sbjct: 58  -LKPEEELSLFIADRKEHVQNMIKPAINDGYAVILDRYMYSSIAYQGAK-GIDREYIYNL 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  + PD   I  LP++  L R+     + +   +D FE K+    +K  +IF   
Sbjct: 116 HKDFI--IEPDLVFIFHLPIETALNRI-----MEKRGFVDRFENKN--YLKKVDEIFSSF 166

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
                   H +++    +++   ++ I+ +    ++ PL S
Sbjct: 167 NAAN---IHHINADKDEEALKNELMQIIRD---SKILPLDS 201


>gi|116754547|ref|YP_843665.1| dTMP kinase [Methanosaeta thermophila PT]
 gi|116665998|gb|ABK15025.1| thymidylate kinase [Methanosaeta thermophila PT]
          Length = 202

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 25/221 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I+ EGI+GAGKTT   +L++       D   TREP   P  E AR           
Sbjct: 5   RGILITLEGIDGAGKTTVARMLRKRFP----DFVFTREPTDGPLGEMARRA--------- 51

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSL 120
               +  +F A   +H+ + I P++  G++++ DR++DS  AYQG   R +    ++  L
Sbjct: 52  SGFEQLFLFMADHANHLRSCILPSINSGEVVVSDRYIDSRVAYQGALLRRTISMEWIYEL 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  +MPD T++  +   + L R +NR           FE + ++        F  +
Sbjct: 112 HRP--WSLMPDLTLLFRIDPSVALMRCKNR------GATSIFEMEALL--RDVSGNFEIL 161

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           A  +P+R  I+++      VA    + +   +Q+    L S
Sbjct: 162 ASREPERFVIINAEREISEVAERAASEIERFIQQNERQLGS 202


>gi|254166701|ref|ZP_04873555.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|289596133|ref|YP_003482829.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|197624311|gb|EDY36872.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|289533920|gb|ADD08267.1| thymidylate kinase [Aciduliprofundum boonei T469]
          Length = 197

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 19/212 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GK+T    + + L    +D+ +T EP  T   +  R  +     +E   
Sbjct: 1   MFIVFEGIDGSGKSTIARRIAKHLSSLGHDIFLTEEPTTTWMGKDVRRAI----EEEKNP 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            ++A++F A R +HV   I+  L +GKI++ DR++ S++AYQG +         +L+ + 
Sbjct: 57  LSQALLFFADRAEHV-EAIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD  I+L +    GL  V  R         + FER+     E+ + I++D+
Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR------DFKEKFERE--EFLERVQDIYMDL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A        +VDS  +   V  ++  I+ + +
Sbjct: 168 ADKYG--FFVVDSNRNLNEVYEDVRKIIDDRI 197


>gi|218883455|ref|YP_002427837.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
 gi|218765071|gb|ACL10470.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n]
          Length = 206

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 20/214 (9%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+  G FI  EG++GAGKTT    L   L  +      T EP  +        V+ S   
Sbjct: 1   MHGKGCFIVLEGLDGAGKTTVARRLVEDLSSRGIPASYTYEPTDSE----IVRVIKSTYN 56

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +   A  +A+ FA  RL HV+N ++P L +G  ++ DR+  SS AYQ           + 
Sbjct: 57  NLRDAYIDALAFALDRLIHVKNWVKPLLDKGVTVISDRYFYSSVAYQSASG----APFEW 112

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178
           + E++   + PD  I LD+  + GL R     S         F E ++    ++ R ++L
Sbjct: 113 VIEVNKFAMKPDVAIYLDIEPEEGLSRKHMHTS--------RFPEYEEKEFLQRVRSMYL 164

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +          +D++     V   I +IV+  +
Sbjct: 165 RMVEM--GLLIYIDASKPLSEVYGRIWDIVYGRL 196


>gi|108757704|ref|YP_630801.1| putative thymidylate kinase [Myxococcus xanthus DK 1622]
 gi|108461584|gb|ABF86769.1| putative thymidylate kinase [Myxococcus xanthus DK 1622]
          Length = 566

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           +FI FEGI+G+GKTT  +LL   L+R  Y V   RE G    PAA   R +     + E 
Sbjct: 1   MFIDFEGIDGSGKTTLSNLLAAKLKRLGYRVAHAREGGELQAPAARRIRELTRDSRLLEM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E  +  A     ++ V+ PAL  G++ + DR+L S  A  G         L    E
Sbjct: 61  SPRTEFFLNLARDAQQLDEVVAPALSRGEVCITDRYLYSQLALSGGGRGLPMDELRPACE 120

Query: 123 ISVQEVMPDCTIILDLPVDIG--LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ Q + PD  I++D+  D+    KR+    S R S            +  + R+ FL++
Sbjct: 121 LASQGLWPDLVILVDVDPDLARLRKRLGKLQSKRVSDGDSRKGLVGAGLAVRVRESFLEM 180

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKR 215
           AR  P R  I+++     + +   +++ V   ++ R
Sbjct: 181 ARKDPQRWIILENNDVPLRVLEQRLVDAVVARLEGR 216


>gi|254168531|ref|ZP_04875375.1| thymidylate kinase [Aciduliprofundum boonei T469]
 gi|197622586|gb|EDY35157.1| thymidylate kinase [Aciduliprofundum boonei T469]
          Length = 197

 Score =  177 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 19/212 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GK+T    +   L    + + +T EP  T   +  R  +     +E   
Sbjct: 1   MFIVFEGIDGSGKSTIAKRIAEHLSSLGHKIFLTEEPTTTWMGKDVRRAI----EEEKNP 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            ++A++F A R +HV   I+  L +GKI++ DR++ S++AYQG +         +L+ + 
Sbjct: 57  LSQALLFFADRAEHV-EAIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD  I+L +    GL  V  R         + FER+     E+ + I++ +
Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR------DFKEKFERE--EFLERVQDIYMAL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A        +VDS  +   V  ++  I+   +
Sbjct: 168 ADKYG--FFVVDSNRNLNEVYDDVRKIIDARI 197


>gi|15668468|ref|NP_247266.1| thymidylate kinase [Methanocaldococcus jannaschii DSM 2661]
 gi|2497577|sp|Q57741|KTHY_METJA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|1591015|gb|AAB98278.1| thymidylate kinase (tmk) [Methanocaldococcus jannaschii DSM 2661]
          Length = 188

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +FI FEGI+G+GKTT   LL + +     D   T EP  +   +  R +L   G  
Sbjct: 1   MVDNMFIVFEGIDGSGKTTQSKLLAKKM-----DAFWTYEPSNSLVGKIIREIL--SGKT 53

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   +  A++FAA R++H   +I+  L +   ++CDR+L SS AYQ         F+ S+
Sbjct: 54  EVDNKTLALLFAADRIEH-TKLIKEELKKRD-VVCDRYLYSSIAYQSVA-GVDENFIKSI 110

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   + PD   +L + ++  LKRV+ +         D FE+KD    +K +  +L++
Sbjct: 111 NRYA---LKPDIVFLLIVDIETALKRVKTK---------DIFEKKD--FLKKVQDKYLEL 156

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211
           A        ++D+   S + V   I+  +  +
Sbjct: 157 AEEY--NFIVIDTTKKSVEEVHNEIIGYLKNI 186


>gi|26554269|ref|NP_758203.1| thymidylate kinase [Mycoplasma penetrans HF-2]
 gi|46576587|sp|Q8EUV4|KTHY_MYCPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|26454278|dbj|BAC44607.1| thymidylate kinase [Mycoplasma penetrans HF-2]
          Length = 214

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 11/218 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSC 57
           ++ GLF++FEG +  GK+T   L+ + L         V +TREPGGT   E  R +L++ 
Sbjct: 3   LDKGLFVAFEGPDACGKSTVSKLVYQKLINFFNNKDSVILTREPGGTEVGEKIREILVN- 61

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              +     EA++FAA+R +HV NVI  A    KI+LCDRF+ SS  YQG   +  +  +
Sbjct: 62  --YDIDPRTEALLFAASRTEHVWNVILKAKANKKIILCDRFIHSSLVYQGIVKNLGYKNV 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQ 175
             + +  + ++ PD          + L+R            LD  Y + +++   +K   
Sbjct: 120 YKVNQFGISKIKPDIVFYFSANPKVLLERKTKDKDRDIFDRLDNQYAQEENL---KKIIG 176

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +  I +        +D+    + +A  I   + E V+
Sbjct: 177 GYSSILQFDNRNVIRLDALKPVEELANKICATILERVR 214


>gi|145299023|ref|YP_001141864.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851795|gb|ABO90116.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 206

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 7/170 (4%)

Query: 43  GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102
           G P AE  R ++     +    EAE ++  A+R+  VE  I+PAL EG+ ++ DR   SS
Sbjct: 35  GNPLAERMRAIVKEVHDERLTIEAELLLMYASRVQLVETRIKPALAEGRWVVGDRHDLSS 94

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            AYQG         + ++++  + +  PD T+ LD+   +GL+R ++R        LD  
Sbjct: 95  QAYQGGGRGIDAGLIGAIKQAVLGDFKPDFTLYLDIDPALGLQRARHR------GELDRI 148

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           E + +   E+ R  +L++A    D   ++D+  +   V T I   +   +
Sbjct: 149 ELEQLSFFERTRSRYLELAAKD-DSIRVIDAGQTPDQVKTAIEAALDHYL 197


>gi|162449104|ref|YP_001611471.1| putative thymidylate kinase [Sorangium cellulosum 'So ce 56']
 gi|161159686|emb|CAN90991.1| putative Thymidylate kinase [Sorangium cellulosum 'So ce 56']
          Length = 208

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 14/214 (6%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
            FEGI+GAG +T        L+     VHVTREP   P     R VL          +AE
Sbjct: 2   VFEGIDGAGTSTQAERFAAHLRAARRMVHVTREPSAGPVGALLRQVLTHRISLPGARQAE 61

Query: 68  --AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSLQ 121
             A++F+A RLDH+   I P L +G +++ DR+  SS AYQ    GE  +     ++ ++
Sbjct: 62  IMALLFSADRLDHLGAEIEPLLRDGYVVISDRYDLSSLAYQSTTAGEDGAGSGAIVEWIR 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E++   + PD T+++D+  +I  KR + R    E      FE+ ++    +  + +    
Sbjct: 122 ELNRHALRPDVTVVIDVAPEIAEKRRRGRGGAEEL-----FEKTEL--QARLAEAYRRAE 174

Query: 182 RNQP-DRCHIVDSAHSFQSVATNILNIVWELVQK 214
              P DR   +D   S   VA  I   +  +V++
Sbjct: 175 ELVPGDRVIHIDGNGSVDEVARAITAALSAVVER 208


>gi|197294763|ref|YP_001799304.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171854090|emb|CAM12069.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     
Sbjct: 1   MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + + ++  A  L   + +I PAL+ G ++L DR+ DS++AYQ + +   +    + 
Sbjct: 58  KISPKTKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+   + P  T  LD+   IGLKR Q + + +    LD  E+K +   +  R  +L+ 
Sbjct: 118 KIINHFLIKPKLTFYLDIEPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173

Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
            +       +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|159040886|ref|YP_001540138.1| dTMP kinase [Caldivirga maquilingensis IC-167]
 gi|254808282|sp|A8MB58|KTHY_CALMQ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|157919721|gb|ABW01148.1| dTMP kinase [Caldivirga maquilingensis IC-167]
          Length = 205

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 14/210 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+  EGI+G GK+T I L    L+R+ Y V+ T EP  +P     R  +L   ++     
Sbjct: 4   FVDVEGIDGVGKSTVIRLTADELRRRGYLVYTTSEPSDSPIGLFIRRSILESNLE-VEPM 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A A++FAA R+ H   VI+P + EG I++ +R+++SS AYQG    SQ + ++ + E++ 
Sbjct: 63  ALALLFAADRVIHYNRVIKPKVKEGYIVITERYIESSVAYQG----SQGVPVEWIIEVNS 118

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD  I+L+ P++    R+ NR        L+YFER +       ++++L  AR + 
Sbjct: 119 MVAEPDLVIVLNAPLNTVASRLSNR------GMLEYFER-NTDFLRSVQEVYLRRARER- 170

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               ++D++    +V  ++L ++ +  + +
Sbjct: 171 -NYPVIDASRVINNVVNDVLTLIEDKAKGK 199


>gi|12044856|ref|NP_072666.1| thymidylate kinase [Mycoplasma genitalium G37]
 gi|255660021|ref|ZP_05405430.1| thymidylate kinase [Mycoplasma genitalium G37]
 gi|1351454|sp|P47252|KTHY_MYCGE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1045674|gb|AAC71222.1| thymidylate kinase [Mycoplasma genitalium G37]
 gi|166078870|gb|ABY79488.1| thymidylate kinase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 210

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/216 (30%), Positives = 112/216 (51%), Gaps = 12/216 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN G+F+  EG++GAGKT  I   K+    K  NY +  TREPGGT  AE  R +LL+  
Sbjct: 1   MNKGVFVVIEGVDGAGKTALIEGFKKLYPTKFLNYQLTYTREPGGTLLAEKIRQLLLN-- 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      EA +FAAAR +H+  +I+PA+ + ++++ DRF+ SS+AYQG         + 
Sbjct: 59  -ETMEPLTEAYLFAAARTEHISKLIKPAIEKEQLVISDRFVFSSFAYQGLSKKIGIDTVK 117

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +   +++ +MP+ T ILD      L+R+Q R +      LD F +      +  R  +L
Sbjct: 118 QINHHALRNMMPNFTFILDCNFKEALQRMQKRGND---NLLDEFIKGKNDF-DTVRSYYL 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +       C +++  +  + +   I  ++   +Q+
Sbjct: 174 SLV--DKKNCFLINGDNKQEHLEKFI-ELLTRCLQQ 206


>gi|6066850|emb|CAB58204.1| thymidylate kinase [Yersinia pestis]
          Length = 165

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%)

Query: 24  LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81
           +   L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VEN
Sbjct: 5   VVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           VI+PAL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  
Sbjct: 65  VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPA 124

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +GL R + R        LD  E++ +   E+ R  +L++A + 
Sbjct: 125 VGLARARAR------GELDRIEQESLAFFERTRARYLELAASD 161


>gi|23009766|ref|ZP_00050693.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1]
          Length = 137

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/130 (50%), Positives = 85/130 (65%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+FI+FEG EGAGK+T I+ L   LQ    +V  TREPGGT  AEA R  LL      FG
Sbjct: 8   GVFITFEGGEGAGKSTQIARLATALQGSGREVVTTREPGGTERAEALRAALLRGVAKPFG 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA++FAAAR+DH+E +IRPAL  G ++LCDRF DS+ AYQG         + SL+ +
Sbjct: 68  PFAEALMFAAARIDHIETLIRPALARGAVVLCDRFADSTRAYQGAAGGLDPGLIASLERV 127

Query: 124 SVQEVMPDCT 133
           +++ + PD T
Sbjct: 128 TLEGLRPDLT 137


>gi|296242887|ref|YP_003650374.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
 gi|296095471|gb|ADG91422.1| thymidylate kinase [Thermosphaera aggregans DSM 11486]
          Length = 203

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 19/212 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G FI  EGI+GAGKTT   +L    + K  D   T EP  +         +       
Sbjct: 5   NRGFFIVLEGIDGAGKTTLAKMLIDKFKSKGLDAIYTYEPTDS----LIVKAVKGDYSPY 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  +A+ FA  RL HV+ +I P L +G  ++ DR+  SS AYQ    +      + + 
Sbjct: 61  RDAYIDALAFALDRLIHVKKLILPMLGKGVTVISDRYFYSSIAYQSAMGAPY----EWVA 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDI 180
           E++   + PD  I LD+P ++ + R               F E ++    EK RQ +  +
Sbjct: 117 EVNKYALRPDLAIYLDIPPEVAIDR--------RKGLPSRFPEFEEREFLEKVRQYYKRM 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                     VD+    Q+V + ++  +  L+
Sbjct: 169 VSE--GLLVEVDATRKLQTVYSEVIEKIRSLL 198


>gi|6066852|emb|CAB58225.1| thymidylate kinase [Yersinia pseudotuberculosis]
 gi|6066854|emb|CAB58210.1| thymidylate kinase [Yersinia pseudotuberculosis]
 gi|6066856|emb|CAB58211.1| thymidylate kinase [Yersinia pseudotuberculosis]
 gi|6066858|emb|CAB58212.1| thymidylate kinase [Yersinia pseudotuberculosis]
          Length = 165

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%)

Query: 24  LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81
           +   L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VEN
Sbjct: 5   VVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           VI+PAL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  
Sbjct: 65  VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPA 124

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +GL R + R        LD  E++ +   E+ R  +L++A + 
Sbjct: 125 VGLARARAR------GELDRIEQESLAFFERTRARYLELAASD 161


>gi|330507877|ref|YP_004384305.1| thymidylate kinase [Methanosaeta concilii GP-6]
 gi|328928685|gb|AEB68487.1| thymidylate kinase [Methanosaeta concilii GP-6]
          Length = 211

 Score =  175 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVD 60
            GL I+ EGI+G+GK+T I  +   L+    +  + +T EP  + A    R  +L     
Sbjct: 2   KGLLITLEGIDGSGKSTAIRHIAAKLKELVPERTLLITAEPSNSAAGRILRSEILRESTG 61

Query: 61  EFG---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLF 116
           E        E  +F A    H+ + I P+L  G I+LCDR+ DS+ AYQG          
Sbjct: 62  ELSFAEHMEELFLFMADHARHLADTIIPSLEAGAIVLCDRYADSTAAYQGVTLKGIVPDP 121

Query: 117 LDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           L  ++EI     + PD T++  L   + ++R+ +R         + FER+      +   
Sbjct: 122 LVWIREIYRPWNLRPDRTLLFLLDPQLSVQRISSRSGR------EKFERQ--EFLRQVDG 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            F  +A  +P+R  I+D++    +VA + ++ + E++
Sbjct: 174 NFRRLASLEPERFVIIDASLDEDAVAESAVSSILEML 210


>gi|6066862|emb|CAB58188.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066864|emb|CAB58189.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066866|emb|CAB58190.1| thymidylate kinase [Yersinia enterocolitica]
          Length = 165

 Score =  175 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%)

Query: 24  LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81
           +   L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VEN
Sbjct: 5   VVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           VI+PAL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  
Sbjct: 65  VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPA 124

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           IGL R + R        LD  E++ +   E+ R+ +L++A   
Sbjct: 125 IGLARARAR------GELDRIEQESLAFFERTRERYLELAATD 161


>gi|197294449|ref|YP_001798990.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853776|emb|CAM11708.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   ISFEG++G+GKTT I+ LK++ + K Y + V +  G +   +  R++ L     
Sbjct: 1   MTN-KLISFEGVDGSGKTTLINELKKYFENKGYQIKVFQGLGSSIVGKEIRNLFLHQS-- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + + ++  A  L   + +I PAL+ G ++L DR+  S++AYQ + +   +    + 
Sbjct: 58  KISPKTKYLLSLANMLQTQDELIIPALLSGYLVLVDRWYGSTFAYQSKGNYIDYDDKITS 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+   + P  T  LD+   IG++R QN+ + +    LD  ERK +   E  R+ +L+ 
Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK----LDLIERKPLNYFENVRKHYLNQ 173

Query: 181 ------ARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQKRV 216
                 A      C   ++++  S +     I+ I   L+ K++
Sbjct: 174 HKYCNDANYNHKNCNHFLINATKSQKDNLNQIMKI---LINKQI 214


>gi|307354495|ref|YP_003895546.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
 gi|307157728|gb|ADN37108.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
          Length = 206

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 18/221 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G GK+T +  LK  L     D   TREPG T   EA R  +     +    
Sbjct: 1   MLITIEGIDGTGKSTLVENLKGLLSD--LDPVFTREPGSTWIGEAVRRGI----AEGIDP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEI 123
            AEA++F A    H+E VIRP L EG+I++ DR+ DS YAYQ           +  ++ I
Sbjct: 55  VAEALLFTADHAAHLETVIRPQLEEGRIIISDRYSDSRYAYQASTLKGILPDPMKWMKSI 114

Query: 124 SVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                ++P+ T +L +PV+  ++R+    + +E     +FE    +  E+ +  +L +A 
Sbjct: 115 HEGWTIVPELTFLLVIPVEDAVERLNKNRTHQE-----HFECASTL--EEVKNNYLVLAE 167

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
             P+R  +VD++     +A  +     E+ +K  S   SKK
Sbjct: 168 EDPERFILVDASLDTDEIAEFVA---GEIRKKAESKNKSKK 205


>gi|6066860|emb|CAB58213.1| thymidylate kinase [Yersinia pseudotuberculosis]
          Length = 165

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%)

Query: 24  LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81
           +   L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VEN
Sbjct: 5   VVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           VI+PAL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  
Sbjct: 65  VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPA 124

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +GL R + R        LD  E++ +   E+ R  +L++A + 
Sbjct: 125 VGLARARAR------GELDRIEQESLAFFERTRARYLELATSD 161


>gi|13507745|ref|NP_109694.1| thymidylate kinase [Mycoplasma pneumoniae M129]
 gi|2497578|sp|P75106|KTHY_MYCPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|1673808|gb|AAB95796.1| thymidylate kinase [Mycoplasma pneumoniae M129]
 gi|301633244|gb|ADK86798.1| dTMP kinase [Mycoplasma pneumoniae FH]
          Length = 210

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 11/195 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G+F++ EG++GAGKT  +   K+   +    +    +REPGGTP AE  R +LL   
Sbjct: 1   MKQGVFVAIEGVDGAGKTVLLEAFKQRFPQSFLGFKTLFSREPGGTPLAEKIRALLLH-- 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      EA +FAA+R +HV  +I+PAL + ++++ DRF+ SSYAYQG         + 
Sbjct: 59  -EAMEPLTEAYLFAASRTEHVRQLIQPALQQKQLVIVDRFVWSSYAYQGLIKKVGLDVVK 117

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L   +V + MPD T I+D   +  L R+  R        LD   +K        RQ + 
Sbjct: 118 KLNADAVGDSMPDFTFIVDCDFETALNRMAKRGQD---NLLDNTVKKQADF-NTMRQYYH 173

Query: 179 DIARNQPDRCHIVDS 193
            +  N   R  ++D 
Sbjct: 174 SLVDN--KRVFLLDG 186


>gi|71274567|ref|ZP_00650855.1| Thymidylate kinase [Xylella fastidiosa Dixon]
 gi|71898106|ref|ZP_00680292.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|71901337|ref|ZP_00683432.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|170730823|ref|YP_001776256.1| thymidylate kinase [Xylella fastidiosa M12]
 gi|254808316|sp|B0U447|KTHY_XYLFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|71164299|gb|EAO14013.1| Thymidylate kinase [Xylella fastidiosa Dixon]
 gi|71728881|gb|EAO31017.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|71732080|gb|EAO34136.1| Thymidylate kinase [Xylella fastidiosa Ann-1]
 gi|167965616|gb|ACA12626.1| dTMP kinase [Xylella fastidiosa M12]
          Length = 217

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F 
Sbjct: 9   GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAATGRFS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  V    R  HVE++I P +  G +++ DR+  S  AYQG       L +D+L E 
Sbjct: 66  PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL +   
Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--E 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209


>gi|257387466|ref|YP_003177239.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286]
 gi|257169773|gb|ACV47532.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286]
          Length = 198

 Score =  174 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT    L+R       D   TREP  +   EA +  +     DE  +
Sbjct: 1   MLLTLEGLDGSGKTTAWETLQRH-AAVPDDAVFTREPTESWYGEAVQRSI---DDDEADS 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEI 123
            AE  ++ A   DH+ N I PAL  G++++ DR+ DS YAYQG   S +    L  ++++
Sbjct: 57  LAELFLYTADHADHLANTIEPALDAGRLVVSDRYSDSRYAYQGATLSDRLDDALGYVRDV 116

Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +     PD TI LD+  +   +R         S   + FE          R+ +  +  
Sbjct: 117 HAPWTRPPDATIYLDVDAETAAER---------SGATNKFE--TADYLADVRENYERLIA 165

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +P+R   +D+    ++V   I   V EL+
Sbjct: 166 AEPERFVRIDATRPERAVRAAIEEAVDELL 195


>gi|282163168|ref|YP_003355553.1| probable thymidylate kinase [Methanocella paludicola SANAE]
 gi|282155482|dbj|BAI60570.1| probable thymidylate kinase [Methanocella paludicola SANAE]
          Length = 201

 Score =  174 bits (442), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I+ EGI+G GKTT + LLK +L+R   +    +EP      +    +        
Sbjct: 3   RKGRLITIEGIDGTGKTTQVQLLKEWLERHGVEAVALKEPTQGKYGQ---EIARRAHAGS 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   E  +F   R + VE  IRPAL  GK ++ DR+  S+ AYQG         +    
Sbjct: 60  FGPRDELRLFMEDRREDVEKNIRPALESGKSVIMDRYYLSNMAYQGA-RGLDPERIRLEN 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E      +PD  IILDL  +  + RV  R ++       +FE +     EK R+IFL I 
Sbjct: 119 E--AFSPVPDLIIILDLAPEKSMARVNTRKNVVG-----HFENE--AYLEKVRKIFLAIG 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +  P+   ++++      V   I++ V + ++
Sbjct: 170 KQ-PN-AVVINTEAPVADVHERIVDAVRDRLR 199


>gi|255513737|gb|EET90002.1| dTMP kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 215

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 102/222 (45%), Gaps = 21/222 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GK+T   +L  +L+        T EP   P  +  + +++S       A
Sbjct: 1   MLIAFEGIDGSGKSTQAEMLDSYLKSSGIAAVTTAEPTSGPIGKLIKEIVVSKK--PINA 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++F A R  H+E  I P++ EGK+++ DR++ S+ AY       +   +     I+
Sbjct: 59  LAMQMLFTADRAYHLETTIMPSISEGKVIITDRYIGSTIAYGTAAGIDKRFLVG----IN 114

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------------KDVMIH 170
            + + PD T ++D      ++R+  R +          E+              + +   
Sbjct: 115 RKFIPPDITFVIDANPRKAVERLNRRAAEFLKNKTALMEKDGELFKQKSTTTMFEKLGFL 174

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            + R  +L++ ++  +  ++++   S  S++  I+NI+   +
Sbjct: 175 GRARLAYLEMQKDFKN-YYVINGNRSKGSISKEIINILDTKI 215


>gi|88603867|ref|YP_504045.1| thymidylate kinase [Methanospirillum hungatei JF-1]
 gi|121696415|sp|Q2FS90|KTHY_METHJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|88189329|gb|ABD42326.1| thymidylate kinase [Methanospirillum hungatei JF-1]
          Length = 206

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 20/221 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+G+GK+T    L  +L   N    +T EPG T   EA R  +     +    
Sbjct: 1   MLVTIEGIDGSGKSTLHKALGPYLADLNP--VITCEPGSTWIGEAVRRAIR----EHADP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEI 123
            AEA++F A    H+  V+RPAL E ++++ DR++DS   YQ    D         L+ +
Sbjct: 55  IAEALLFVADHAAHLREVVRPALSEDRLVISDRYIDSRLVYQQVTLDGIIPDPRTWLRAV 114

Query: 124 SVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                +MPD TI+L +PV + L+R   R         ++FE++ V+   K ++ ++ +  
Sbjct: 115 HQGWTIMPDLTILLAVPVPVALERTGKR------GSGEHFEQESVL--TKVQEYYMQLVE 166

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
               R  I+D     +    +IL +  E ++ R   ++ KK
Sbjct: 167 EDTARFLILDGTLPPE----HILKVAGEAIRFRFDEMNRKK 203


>gi|6066870|emb|CAB58192.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066874|emb|CAB58194.1| thymidylate kinase [Yersinia enterocolitica]
          Length = 165

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%)

Query: 24  LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81
           +   L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VEN
Sbjct: 5   VVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           VI+PAL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  
Sbjct: 65  VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPV 124

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           IGL R + R        LD  E++ +   E+ R+ +L++A   
Sbjct: 125 IGLARARAR------GELDRIEQESLAFFERTRERYLELAATD 161


>gi|55379836|ref|YP_137686.1| thymidylate kinase [Haloarcula marismortui ATCC 43049]
 gi|59798125|sp|Q5UXM3|KTHY_HALMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|55232561|gb|AAV47980.1| thymidylate kinase [Haloarcula marismortui ATCC 43049]
          Length = 195

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT    L+        +   TREP  T   +A +  +     D+  +
Sbjct: 1   MLVTLEGLDGSGKTTVWERLRSD-DAVPSETVFTREPTDTWYGDAVQRSI---DNDDADS 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            AE  ++ A    H+   +RPAL EG++++ DR+ DS YAYQG   +    F D L  + 
Sbjct: 57  LAELFLYTADHAAHLSETVRPALNEGRLVVSDRYSDSRYAYQGATLAGSGTFDDPLSYVR 116

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +     PD T+ LDL  +   +R         S   + FE          R  +  +
Sbjct: 117 EVHAPWTRPPDRTVYLDLDPETAARR---------SGATNKFE--TAEYLTTVRDNYERL 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               P+R   VD+     +V   +   + +
Sbjct: 166 IEADPERFVRVDATADPDTVYERVRAAILD 195


>gi|15790812|ref|NP_280636.1| thymidylate kinase [Halobacterium sp. NRC-1]
 gi|169236558|ref|YP_001689758.1| thymidylate kinase [Halobacterium salinarum R1]
 gi|14285513|sp|Q9HNV4|KTHY_HALSA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|229621738|sp|B0R6P3|KTHY_HALS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|10581368|gb|AAG20116.1| thymidylate kinase [Halobacterium sp. NRC-1]
 gi|167727624|emb|CAP14412.1| dTMP kinase [Halobacterium salinarum R1]
          Length = 199

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 23/200 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++G+GKTT    L+      +  V  T EP  +   +A R    S    +   
Sbjct: 1   MLVTLEGLDGSGKTTVWESLRA---SHDDGVTFTAEPTDSQYGQAVRR---SESAADADP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS----QHLFLDSL 120
            AE  +F A   DH+  V+ PAL  G +++ DR+ DS YAYQG   +        ++  +
Sbjct: 55  IAELFLFTADHADHLSRVVSPALDRGDVVISDRYSDSRYAYQGATLADTVPRAMEYVRGI 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +   +   PD T+  D+  D G  R         S   + FE          R  +  +
Sbjct: 115 HQPWTRP--PDVTLYFDVDPDTGAAR---------SGATNKFE--TAAFLADVRANYEQL 161

Query: 181 ARNQPDRCHIVDSAHSFQSV 200
               P+R   +D+  S ++V
Sbjct: 162 IDYTPERFVRIDATQSPEAV 181


>gi|6066868|emb|CAB58191.1| thymidylate kinase [Yersinia enterocolitica]
 gi|6066872|emb|CAB58193.1| thymidylate kinase [Yersinia enterocolitica]
          Length = 165

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 8/163 (4%)

Query: 24  LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81
           +   L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VEN
Sbjct: 5   VVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           VI+PAL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  
Sbjct: 65  VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPV 124

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           IGL R + R        LD  E++ +   E+ R+ +L +A   
Sbjct: 125 IGLARARAR------GELDRIEQESLAFFERTRERYLKLAATD 161


>gi|154151261|ref|YP_001404879.1| thymidylate kinase [Candidatus Methanoregula boonei 6A8]
 gi|153999813|gb|ABS56236.1| dTMP kinase [Methanoregula boonei 6A8]
          Length = 206

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 16/211 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++ EGI+G+GK+T ++ LK  L+  +     TREPG T   ++ R  +     ++    
Sbjct: 3   LVTLEGIDGSGKSTLLAALKESLEDLSP--VFTREPGATWVGDSVRRAI----AEQIDPV 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEIS 124
            EA +F A    H+  V+RPAL E K+++ DR+ DS +AYQ    +         L+ + 
Sbjct: 57  CEATLFVADHAAHLATVVRPALAEHKLVISDRYSDSRFAYQAVTLEGVIPEPERWLRAMH 116

Query: 125 VQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               ++PD T +L +P+D  L R+  +         ++FER+DV+  EK +  +++ AR 
Sbjct: 117 DGWSIVPDKTFLLAIPIDDALARLSKKSGR------EHFERRDVL--EKVQNRYMEFARA 168

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +PDR  IVDS     +VA  +   + ++V +
Sbjct: 169 EPDRFVIVDSMLDKDAVAEFVAGAIRQVVAE 199


>gi|197294491|ref|YP_001799032.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853818|emb|CAM11759.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 215

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   ISFEGI+G+GKTT I+ LK F + K Y   V +  G +   +  R++ L     
Sbjct: 1   MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   + + ++  A  L   + +I PAL+ G ++L DR+  S++AYQ + +   +    + 
Sbjct: 58  KISLKTKYLLSLANMLQTQDELIFPALLSGYLVLVDRWYGSTFAYQSKGNYIDYDDKITS 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+   + P  T  LD+   IG++R QN+ + +    LD  ERK +   +  R  +L+ 
Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK----LDLIERKPLNYFKNVRAHYLNQ 173

Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216
            +       +   CH  ++++ +S +     I+ I   L+ K++
Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214


>gi|215400691|ref|YP_002332309.1| putative thymidylate kinase [Lactococcus lactis]
 gi|169641050|gb|ACA61269.1| putative thymidylate kinase [Lactococcus lactis]
          Length = 251

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 15/214 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + L I FEG++G+GKTT I +L ++ + K   V  T++P      +      L  G+ 
Sbjct: 53  MKN-LLIVFEGLDGSGKTTQIDMLYQWFENKKLKVFTTKQPTDYYRNDKRVRDYLDNGIA 111

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                + A++ AA R   + + I P + E  I +CDR+L SS A+   R       L   
Sbjct: 112 P-NMYSIALLAAADRTYQITSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEIL--- 166

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I+     PD T+ LD+P +  L RV+ R           +E K+ ++  + RQ FLD+
Sbjct: 167 -MINKGVPTPDVTVFLDVPPERALDRVRQRDGKDI-----KYEEKNELVFNQVRQNFLDV 220

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               P    IVDS      V   I N V E++ K
Sbjct: 221 L---PKNALIVDSTLGIDKVHQIITNFVSEVMDK 251


>gi|15837182|ref|NP_297870.1| thymidylate kinase [Xylella fastidiosa 9a5c]
 gi|9105444|gb|AAF83390.1|AE003904_11 thymidylate kinase [Xylella fastidiosa 9a5c]
          Length = 217

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F 
Sbjct: 9   GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  V    R  HVE++I P +  G +++ DR+  S  AYQG       L +D+L E 
Sbjct: 66  PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL +   
Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--E 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 173 LPSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 209


>gi|256810617|ref|YP_003127986.1| thymidylate kinase [Methanocaldococcus fervens AG86]
 gi|256793817|gb|ACV24486.1| thymidylate kinase [Methanocaldococcus fervens AG86]
          Length = 186

 Score =  173 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 27/203 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT   LL             T EP  +   +  R +L   G  +   
Sbjct: 1   MFIVFEGIDGSGKTTQSKLLAEK-----IKAFWTYEPSNSDVGKFIREIL--SGNIKVDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  A++FAA R++H + +      +   ++CDR+L SS AYQ      +    D +  I+
Sbjct: 54  KTLALLFAADRVEHTKLIKEKLKEKD--VVCDRYLYSSIAYQSVAGVDE----DFINSIN 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   +L + +++ LKRV+ +         D FE+KD     K +  +L++A   
Sbjct: 108 KYALKPDIVFLLIVDIEVALKRVKTK---------DIFEKKD--FLMKVQDKYLELAEKY 156

Query: 185 PDRCHIVDSA-HSFQSVATNILN 206
                ++D+   S + V   IL 
Sbjct: 157 --NFIVIDTTNKSIKDVHKEILE 177


>gi|330943542|gb|EGH45881.1| thymidylate kinase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 143

 Score =  172 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 6/145 (4%)

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           ++  AAR  H+  VIRPAL  G+++LCDRF D++YAYQG      H  + +L++    ++
Sbjct: 1   MLVFAARAQHLAEVIRPALTRGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQFVQGDL 60

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD T++ DLPV+IGL R   R        LD FE++     +  R  +L+ A  +P R 
Sbjct: 61  RPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRTFFDAVRSTYLERANAEPARY 114

Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213
            +VD+  +   V  ++  ++ +L++
Sbjct: 115 RLVDAGQTLADVQASLDTLLPQLLE 139


>gi|325187412|emb|CCA21950.1| thymidylate kinase putative [Albugo laibachii Nc14]
          Length = 228

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 20/226 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+FI  EG++  GKTT   LL   L + +    + R P  T          L+   ++
Sbjct: 4   KRGVFILIEGLDCCGKTTQTKLLHEALTKMSSAAELLRFPDRTTPTGKLIDAYLTSKDEQ 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F A R +     I   L  GK ++ DR+  S   +   +       ++   
Sbjct: 64  VNDRAIHLLFTANRWE-AAEKIEAILNSGKNIVMDRYAYSGAVFSASKSGMD---MNWCW 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
           +  +    PD  I LDLPVD   KR        E    + +E  +V   EK R  F  + 
Sbjct: 120 QPEIGLPRPDAVIFLDLPVDSASKR--------EDYGAERYE--NVEFQEKVRLNFHKLI 169

Query: 181 ----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ-KRVSPLSS 221
               ++    R H +D+  + + V   +  +    +Q  + +PL+S
Sbjct: 170 ELDHSQKDESRWHFIDANDTIEKVQARVFEVAQRCIQVSQYTPLAS 215


>gi|126179517|ref|YP_001047482.1| thymidylate kinase [Methanoculleus marisnigri JR1]
 gi|166221756|sp|A3CVV0|KTHY_METMJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|125862311|gb|ABN57500.1| thymidylate kinase [Methanoculleus marisnigri JR1]
          Length = 205

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+G+GK+T ++         + D   TREPG T   E+ R  +     +    
Sbjct: 1   MLITIEGIDGSGKSTLLAR--LRELLADLDPLFTREPGATWVGESVRRAI----AERMDP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEI 123
             EA++F A    H++ VIRPAL EG++++ DR+ DS +AYQ    D      L  L+ I
Sbjct: 55  ITEALLFCADHAAHIDTVIRPALDEGRLVISDRYADSRFAYQPVVLDGVLPDPLSWLRRI 114

Query: 124 SVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD T +L LPV+  + R+            +YFE  +  I E+ ++ +L++A 
Sbjct: 115 HEGWSIRPDRTFLLVLPVEDAVSRLG------PEKKREYFE--NAAILEQVQENYLNLAA 166

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P R  +VD+    + VA  I   +
Sbjct: 167 ADPLRFVVVDALLPKEEVARFIAGEI 192


>gi|182682175|ref|YP_001830335.1| thymidylate kinase [Xylella fastidiosa M23]
 gi|254808315|sp|B2I7G4|KTHY_XYLF2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|182632285|gb|ACB93061.1| dTMP kinase [Xylella fastidiosa M23]
 gi|307578444|gb|ADN62413.1| thymidylate kinase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 217

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F 
Sbjct: 9   GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFS 65

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E  V    R  HVE++I P +  G +++ DR+  S  AYQG       L +D+L E 
Sbjct: 66  PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEA 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL +   
Sbjct: 122 NAFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--E 172

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209


>gi|294979332|pdb|2WWF|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Tmp And Adp
 gi|294979333|pdb|2WWF|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Tmp And Adp
 gi|294979334|pdb|2WWF|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Tmp And Adp
 gi|294979335|pdb|2WWG|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Dgmp And Adp
 gi|294979336|pdb|2WWG|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Dgmp And Adp
 gi|294979337|pdb|2WWG|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Dgmp And Adp
 gi|294979338|pdb|2WWH|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Ap5dt
 gi|294979339|pdb|2WWH|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Ap5dt
 gi|294979340|pdb|2WWH|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Ap5dt
 gi|294979341|pdb|2WWI|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Aztmp And Adp
 gi|294979342|pdb|2WWI|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Aztmp And Adp
 gi|294979343|pdb|2WWI|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With
           Aztmp And Adp
          Length = 212

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 21/212 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG++ +GK+T   LL  +L+  N +V     P             L      
Sbjct: 8   KKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENS- 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+   I+  L++G  ++CDR+  S  AY     +          
Sbjct: 67  MSNETIHLLFSANRWEHMNE-IKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKT---WCM 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIHEKRRQIFLD 179
                 + PD    L++P +    R             DY E   + V   +K  + +  
Sbjct: 123 NPDQGLIKPDVVFYLNVPPNYAQNR------------SDYGEEIYEKVETQKKIYETYKH 170

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            A    D    +D+    + +  +I+  V ++
Sbjct: 171 FAHE--DYWINIDATRKIEDIHNDIVKEVTKI 200


>gi|124807055|ref|XP_001350897.1| thymidylate kinase, putative [Plasmodium falciparum 3D7]
 gi|23497027|gb|AAN36577.1|AE014852_21 thymidylate kinase, putative [Plasmodium falciparum 3D7]
          Length = 210

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 21/212 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG++ +GK+T   LL  +L+  N +V     P             L      
Sbjct: 6   KKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENS- 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+   I+  L++G  ++CDR+  S  AY     +          
Sbjct: 65  MSNETIHLLFSANRWEHMNE-IKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKT---WCM 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIHEKRRQIFLD 179
                 + PD    L++P +    R             DY E   + V   +K  + +  
Sbjct: 121 NPDQGLIKPDVVFYLNVPPNYAQNR------------SDYGEEIYEKVETQKKIYETYKH 168

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            A    D    +D+    + +  +I+  V ++
Sbjct: 169 FAHE--DYWINIDATRKIEDIHNDIVKEVTKI 198


>gi|313616705|gb|EFR89481.1| thymidylate kinase [Listeria innocua FSL S4-378]
          Length = 158

 Score =  171 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 4/154 (2%)

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E   + E ++ A AR  HV   IRPAL  GK +LCDRF+DSS AYQG         + 
Sbjct: 8   NEEMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL 67

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +   ++++ +PD T  LD+P ++GL R+       +   ++  +++D+  HEK +  + 
Sbjct: 68  QVNLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQNGYE 123

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            I +  PDR   VD+  + + + T IL  + + +
Sbjct: 124 KIIQMFPDRFMRVDATKTPEEITTIILADILKQL 157


>gi|166366993|ref|YP_001659266.1| thymidylate kinase [Microcystis aeruginosa NIES-843]
 gi|166089366|dbj|BAG04074.1| thymidylate kinase [Microcystis aeruginosa NIES-843]
          Length = 207

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 20/218 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58
              FI FEGI+G+G +T   LL+ +  ++     ++ EP         R +    L+S  
Sbjct: 2   KPKFIVFEGIDGSGTSTQAKLLQEYFLKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIK 61

Query: 59  VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                    A +FAA R DH+ N    V +    E   ++  R+  SS AY      +  
Sbjct: 62  DQNQFDRQMAYLFAADRHDHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNC----NNP 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             L  +++++     PD  I +D+  DI L R++NR      A  + +E+++ ++  K R
Sbjct: 118 EELAFVRQLNQHFPNPDIVIYIDVLPDISLARIKNR------AITEVYEKQEKLM--KVR 169

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           Q+F+ I +   D C  +D + + +++  NI+N +  L+
Sbjct: 170 QMFIQIFKEYKDNCLQLDGSDTIENLHRNIINYLERLI 207


>gi|304314109|ref|YP_003849256.1| thymidylate kinase [Methanothermobacter marburgensis str. Marburg]
 gi|302587568|gb|ADL57943.1| predicted thymidylate kinase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 194

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 24/194 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
           ++I FEGI+G+GKTTH  L   +L+   Y V   REP  +      R +L S       G
Sbjct: 1   MYICFEGIDGSGKTTHSVLTAEWLRENGYRVFTVREPTDSRIGGLIREMLSSPDARTPDG 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               A++FAA RL     +       G +++ DR   SS  YQ           + + EI
Sbjct: 61  QRILALLFAADRLTLRSKIEGEW--SGSVVVSDRCYYSSMVYQ--------EPAEWVSEI 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  I+LDL V++ ++R             D FE  D     + R+ +L++A  
Sbjct: 111 NRFAPQPDIVILLDLDVELAMERC---------GGTDEFE--DPSFLSRVRERYLELA-- 157

Query: 184 QPDRCHIVDSAHSF 197
             +  +IVD+A   
Sbjct: 158 DKNEFYIVDAARGL 171


>gi|325958282|ref|YP_004289748.1| Thymidylate kinase [Methanobacterium sp. AL-21]
 gi|325329714|gb|ADZ08776.1| Thymidylate kinase [Methanobacterium sp. AL-21]
          Length = 191

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 23/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63
           ++I  EGI+G+GKTT I LL+ ++Q+   DV    EP      +  R +L +   ++E  
Sbjct: 1   MYICLEGIDGSGKTTQIKLLESWIQKCGIDVLRVFEPTDNEVGKLIRKLLQNPDAINENF 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               A++FAA R   + + I  A    KI++ DR   SS  YQ +         + + EI
Sbjct: 61  QITLALLFAADRTVLMRD-ITEAEALAKIVISDRSFYSSMVYQNDS--------EWIAEI 111

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  I+LD+  +  + R            +D FE ++        + +L++A  
Sbjct: 112 NKHAKQPDLVILLDINPETAVSRC---------DGMDSFEEQN--FLASTAKKYLELA-- 158

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
                 +V++ +    V  +I  IV   +
Sbjct: 159 DHQNFMVVNANNGINKVHDDIKRIVAHKL 187


>gi|300871563|ref|YP_003786436.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
 gi|300689264|gb|ADK31935.1| thymidylate kinase [Brachyspira pilosicoli 95/1000]
          Length = 203

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 16/208 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EGI+G+GK+T    L   L + N +   T EP         R  +LS    + 
Sbjct: 2   KGKLIVIEGIDGSGKSTIAKKLAETLNKNNIETIYTFEPTNAYYGAKLRDTMLS---KDM 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + E  +F   R +H+  +I+P+L EGK ++ DR++ SS AYQG +       + ++ E
Sbjct: 59  DLDRELELFVDDRKEHIRLMIKPSLEEGKTVVLDRYMYSSIAYQGAK-GIDIEKIKNMHE 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                ++PD   I  LPV+  L R+     + +   +D FE +     +K   IF     
Sbjct: 118 --SFILIPDIVFIFHLPVEKSLNRI-----MEKRGFIDRFENE--EYLKKVDSIFSSF-- 166

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
           N+P   H +++  S   +   ++ I+ +
Sbjct: 167 NEPFIYH-INADKSIDDINKELIEILKQ 193


>gi|170077931|ref|YP_001734569.1| thymidylate kinase [Synechococcus sp. PCC 7002]
 gi|169885600|gb|ACA99313.1| thymidylate kinase [Synechococcus sp. PCC 7002]
          Length = 219

 Score =  170 bits (433), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 80/213 (37%), Gaps = 19/213 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI FEGI+G+G +T   LL +  QR+     ++ EP         R  L          
Sbjct: 8   KFIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDP 67

Query: 65  ----EAEAIVFAAARLDHVENVI---RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  A +FA  R DH+ N I      L  G  ++  R+  SS AY      +     
Sbjct: 68  VQLNRQLAYLFAGDRHDHLYNEIDGVFKQLAAGIQVITTRYYFSSLAYNA----NNAAEY 123

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + +  ++     PD     DLPV++ L+RVQ R                     + RQ +
Sbjct: 124 EFIYRLNQDFPNPDLVFYCDLPVEVALERVQRRSHQEIYETKAKL--------TQVRQNY 175

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             I +  P     +D+    +++   IL  + +
Sbjct: 176 QQIFQTYPGNWQQLDATQPPETIHQQILQTIAD 208


>gi|257457560|ref|ZP_05622727.1| thymidylate kinase [Treponema vincentii ATCC 35580]
 gi|257444946|gb|EEV20022.1| thymidylate kinase [Treponema vincentii ATCC 35580]
          Length = 209

 Score =  170 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 23/215 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           F+ FEG++G G T+ + LL+     +     V+ T EP G    +  R  L   G   F 
Sbjct: 6   FVVFEGLDGTGTTSQLRLLREAFTTRGLQDTVYFTCEPTGDSIGKLIREAL--SGAAGFD 63

Query: 64  AEAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           A+  A +F A R +HV  ++ I   L  GK +  DR+L SS AYQG     +       Q
Sbjct: 64  AKTIAYLFGADRCEHVYGKSGILTQLQAGKAVFSDRYLFSSLAYQGLDAGKELA-----Q 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
            I+    +P+     DLP    + R++ R   RE      +E++     +K    +  I 
Sbjct: 119 TINAPFPLPEYLFFFDLPASTAMARIEKRNIPREI-----YEKET--FQQKVAAEYQAIF 171

Query: 181 ---ARNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211
              A   PD R   +D++ + + +  NI  IV  L
Sbjct: 172 RHYAETAPDMRILRIDASKTIEEIHENIWRIVCNL 206


>gi|325290200|ref|YP_004266381.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965601|gb|ADY56380.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271]
          Length = 210

 Score =  170 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 17/214 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           SG FI  EG +G+G +T  +LLKR+++ +    V + +EP   P     R VL    V  
Sbjct: 7   SGKFIVLEGTDGSGISTQSALLKRYIENKHGKKVLLAKEPSEGPIGTLIRQVLTH-RVQG 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E+  ++FAA R+DH+++ I PAL +G +++CDR++ SS+AYQG +   Q      + 
Sbjct: 66  IREESLTLMFAADRMDHLQHKIIPALEQGALVICDRYVWSSFAYQGIKIDEQ-----WIL 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +   + PD TI + +   + ++R++          +D FE++ ++  ++    ++ I 
Sbjct: 121 ETNKYALKPDLTIFVKVRPQVSMERIRQ-----NRFQIDVFEQEVIL--KEVMANYIKIK 173

Query: 182 RN---QPDRCHIVDSAHSFQSVATNILNIVWELV 212
                Q +    +D   + +++A  I   V  L+
Sbjct: 174 EAWGSQGENILELDGEDTVENIADRISKKVDSLL 207


>gi|126642563|ref|YP_001085547.1| thymidylate kinase [Acinetobacter baumannii ATCC 17978]
          Length = 151

 Score =  170 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 8/157 (5%)

Query: 53  VLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           +LL+   DE    + E ++  AAR  H++ VI PAL   KI+L DRF D+S+AYQ     
Sbjct: 1   MLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRG 60

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                L  L + +    MP+ T  LD P+++G+ R + R        LD FE++ +    
Sbjct: 61  LSQDKLQLLNQ-NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFT 113

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           K R+ +  + + +P+R   +D+  S   V    L  +
Sbjct: 114 KVREGYETLWKVEPERIKRLDATQSPDQVFEQALQYL 150


>gi|15679753|ref|NP_276871.1| thymidylate kinase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|6016460|sp|O27793|KTHY_METTH RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|2622895|gb|AAB86231.1| thymidylate kinase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 194

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63
           ++I FEGI+G+GKTTH +L   +L+   Y VH  REP  +      R +L S        
Sbjct: 1   MYICFEGIDGSGKTTHAALTASWLRENGYMVHEVREPTDSNIGSLIRSMLSSPDARTPDV 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               A++FAA RL  + + I     E  +++ DR   SS  YQG          + + EI
Sbjct: 61  QRMLALLFAADRL-TLRSKIEGDWAE-DVVVSDRCYYSSMVYQGPE--------EWVCEI 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     PD  I+LD+ V++ ++R             D FE  D +     R+ +L++A  
Sbjct: 111 NRFAPRPDVVILLDIDVEVAMERC---------GGTDEFE--DPLYLAGVRERYLELA-- 157

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             +  + V++      +  +I  I+
Sbjct: 158 DKNGFYTVNAERGVNLIQRDIRRIL 182


>gi|281490597|ref|YP_003352577.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
 gi|161702099|gb|ABX75570.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147]
          Length = 199

 Score =  170 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 15/214 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + L I FEG++G+GKTT I +L ++ + K  +V  T++P      +      L  G+ 
Sbjct: 1   MKN-LLIVFEGLDGSGKTTQIDMLHQWFENKKLEVFTTKQPTDYYRNDKRVRDYLDNGIA 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                + A++ AA R   + + I P + E  I +CDR+L SS A+   R       L   
Sbjct: 60  P-NMYSIALLAAADRTYQISSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEIL--- 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I+    +PD T+ LD+P +  L+RV+ R           +E K+ ++  + RQ FLD+
Sbjct: 115 -MINKGVPIPDVTVFLDVPPERALERVRQRDGEDI-----KYEEKNELVFNQVRQNFLDV 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               P    IVDS      V   I N V E++ K
Sbjct: 169 L---PKNALIVDSTLGIDKVHQIITNFVSEVMGK 199


>gi|225018256|ref|ZP_03707448.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum
           DSM 5476]
 gi|224948953|gb|EEG30162.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum
           DSM 5476]
          Length = 205

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 15/213 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI FEG++G+GK T I LL    +R+      T EP  +    A R  L   G      
Sbjct: 3   KFIVFEGLDGSGKGTQIRLLCEEFKRRGEAFQQTAEPTFSVTGGAIRDAL--NGNHPRHP 60

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              A +F   R+ H     + I   L +GK ++CDR+  SS+AYQG     Q +   +L 
Sbjct: 61  AELAALFLTDRIYHNTGKFDGIELLLSQGKHVICDRYYYSSFAYQGTGCDMQWVMEMNLN 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +++   PD  I LD+       RV        +  L+ FE+ D+      R  F+   
Sbjct: 121 CPNIR--KPDLCIYLDVDPQRSKARVDG-----ANKSLEIFEQ-DIAQITAIRNKFMKAF 172

Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWELV 212
               +R    ++D+      VA ++ + V  ++
Sbjct: 173 ELLGERETIVLIDADRPVDEVAADVWDAVKRIL 205


>gi|119874730|gb|ABM05842.1| Tmk [Yersinia pestis]
          Length = 150

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 8/154 (5%)

Query: 28  LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85
           L+ +   D+  TREPGGTP AE  R ++      +    +AE ++  AAR+  VENVI+P
Sbjct: 3   LRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 62

Query: 86  ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145
           AL  G  ++ DR   SS AYQG         + SL++  + E  PD T+ LDLP  +GL 
Sbjct: 63  ALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLA 122

Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           R + R        LD  E++ +   E+ R  +L+
Sbjct: 123 RARAR------GELDRIEQESLAFFERTRARYLE 150


>gi|284044447|ref|YP_003394787.1| thymidylate kinase [Conexibacter woesei DSM 14684]
 gi|283948668|gb|ADB51412.1| thymidylate kinase [Conexibacter woesei DSM 14684]
          Length = 210

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 29/221 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F+  EG++GAG TT    L   L+ +  + V +T+EP   P     R  +   G   
Sbjct: 5   RGRFVVVEGLDGAGTTTQAERLAAMLRTRGGHAVELTKEPTNGPLGAVLRQAI--EGRVA 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               A A+ FAA R DH+ N +     AL  G+ ++ DR++ SS AY      S+    +
Sbjct: 63  LDPVALALAFAADRADHLFNPVNGVVAALDAGRWVVSDRYVLSSLAYNRGGVVSR----E 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-----R 173
            + E++ + + PD T+ +D+  +I L+R+  R S  E            + H +      
Sbjct: 119 WVAELNARAIAPDLTVFVDVDPEICLERIGARSSADE------------LFHSREQLVAV 166

Query: 174 RQIFLDIARN--QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            + + D+            VD + S  +V   I   V E +
Sbjct: 167 DRNYRDLIAAGHVHGPLATVDGSGSIDAVHDAIWTAVGEAL 207


>gi|115373942|ref|ZP_01461233.1| integral membrane protein with kinase activity [Stigmatella
           aurantiaca DW4/3-1]
 gi|310817945|ref|YP_003950303.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|115369070|gb|EAU68014.1| integral membrane protein with kinase activity [Stigmatella
           aurantiaca DW4/3-1]
 gi|309391017|gb|ADO68476.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 560

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 4/223 (1%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62
           + I FEGI+G+GKTT  + + + L++    V   RE G   +P +E+ R           
Sbjct: 1   MLIVFEGIDGSGKTTLSNRVAQELRQAGLRVRHVREGGQLASPVSESLRRFTRDPANLAL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE +++AA     ++ V RPAL    I++ DRF  ++              +  + +
Sbjct: 61  TPMAELLLYAAREAQLLDEVTRPALATHDIVITDRFFYTAEVLARWGRGLPETSVRPVLD 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + + PD   ++D+   I   R + ++    +             +  + R  +  +A
Sbjct: 121 ACARGLKPDLVFLIDVDPTIARARRKISKIITPKPGAPSRKGLAGAGLQVRLRAGYRTLA 180

Query: 182 RNQPDRCHIV-DSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
              P R  +V ++    + + T ++  +  +   +  P  + +
Sbjct: 181 EESPGRWSLVENAGLPLEVLVTRLVQDILHVRGDQRLPAPASR 223


>gi|327310490|ref|YP_004337387.1| dTMP kinase [Thermoproteus uzoniensis 768-20]
 gi|326946969|gb|AEA12075.1| dTMP kinase [Thermoproteus uzoniensis 768-20]
          Length = 194

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 22/214 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLF++ EGI+G+GK+T I  L++ L      ++ T+EP   P     +   L  G     
Sbjct: 2   GLFVAIEGIDGSGKSTVIEELRKIL-----PIYATKEPSDGPIGRLIKSWALRGGTT--D 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +A++FAA RLDH +  I PAL EG++++ +R+++SS AYQG       + +  ++ I
Sbjct: 55  PYVDALLFAADRLDHYQREIAPALGEGRVVVTERYVESSIAYQGAAG----VDIKFIELI 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +   PD T++LD+  +  + RV  R     S  ++ +ER  +   +  R I+L  A  
Sbjct: 111 NARVPAPDITVLLDIEPEKAVARVSAR-----SGYVEKYER--LEFLKAVRSIYLRRAA- 162

Query: 184 QPDR-CHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +R   ++++    +++A  I  ++       +
Sbjct: 163 --ERGYVVLNAEEPPEAIARRIAEMIRAAANPAL 194


>gi|14285519|sp|Q9PFS7|KTHY_XYLFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 208

 Score =  169 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 17/217 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F  
Sbjct: 1   MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFSP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  V    R  HVE++I P +  G +++ DR+  S  AYQG       L +D+L E +
Sbjct: 58  EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEAN 113

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL +    
Sbjct: 114 AFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--EL 164

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 165 PSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 200


>gi|261403129|ref|YP_003247353.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
 gi|261370122|gb|ACX72871.1| thymidylate kinase [Methanocaldococcus vulcanius M7]
          Length = 187

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 27/206 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI FEGI+G+GKTT    L      K+ +   T EP  +   E  R +L   G  +   
Sbjct: 1   MFIVFEGIDGSGKTTISKKLA-----KSINAFWTYEPSNSVVGELIRKIL--SGNVKVDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  A++F+A R++H    I+  L   + ++CDR+L SS AYQ         F+ S+   +
Sbjct: 54  KTLALLFSADRIEH-NKKIKEEL-RYRDVVCDRYLYSSIAYQSVA-GVDEDFIRSINRYA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD   +L   ++  LKR+  +         D FE+K     EK ++ +LD+A+ +
Sbjct: 111 ---LKPDLVFLLICDIETALKRINTK---------DIFEKK--EFLEKVQEKYLDLAKKE 156

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVW 209
                I+D+   + + V + +   V 
Sbjct: 157 G--FVIIDTTDRTVEDVYSEVFKTVK 180


>gi|262199023|ref|YP_003270232.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
 gi|262082370|gb|ACY18339.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
          Length = 210

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GL I  EGI+G+G +T   LL      +    H T EP   P     R + L+     
Sbjct: 4   HRGLLIVLEGIDGSGTSTQTRLLCDAFAARGRSTHATHEPSTGPVGLLLREM-LAGAHAP 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 ++++AA R DHV+  + PAL  GK+++ DR+  SS AYQG   +    ++ +L 
Sbjct: 63  VDQTTLSLLYAADRADHVQREVEPALAAGKLVVSDRWYHSSLAYQGAGGT--RDWVAALN 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     PD TI L++  +     +  R    +    + F+R  + I ++    + ++ 
Sbjct: 121 RYARA---PDLTIFLEVAAE-----IAARRRADDGRSEEIFDR--LEIQQRVAADYREVI 170

Query: 182 R--NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 +R  ++D      +V+ +I+ +V + + +
Sbjct: 171 DSLRGRERIEVLDGERPLAAVSADIVRLVEDALAR 205


>gi|262198778|ref|YP_003269987.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
 gi|262082125|gb|ACY18094.1| thymidylate kinase [Haliangium ochraceum DSM 14365]
          Length = 572

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 9/219 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62
           +F+ FEGI+G+GKTT  + + + L+R+   V   RE G   +P     R           
Sbjct: 1   MFVVFEGIDGSGKTTVSNKVAKVLRRRGLAVEHVREGGEFASPLVGRMREFGKDPRNMAM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E + + A     +   I+PAL  G ++  DR+L S               +  + +
Sbjct: 61  APLTELLFYVARDAQLLAECIQPALRRGGLVFADRYLYSYEVLSHHGRGVPMDQVRPILD 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-----NRYSLRESACLDYFERKDVMIHEKRRQIF 177
                V PD  + LD+   +   R +      +    +         + V    + R  +
Sbjct: 121 AVSGGVWPDLVVYLDVEPTLARARRKVGKLIKKSKGGKPGGGSRKGLQGVGTQHRLRAGY 180

Query: 178 LDIARNQPDRCHIVDSA--HSFQSVATNILNIVWELVQK 214
           L++A   P+R  +VD+A   S +S    I+  +   +++
Sbjct: 181 LELAERDPERWLVVDNADVLSPESRLDAIVQRIAGAIER 219


>gi|297171025|gb|ADI22039.1| thymidylate kinase [uncultured myxobacterium HF0200_05J13]
          Length = 199

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 15/212 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EGI+G+G TT ++ +   L ++   V  T EP   P     R +L   G +
Sbjct: 1   MTKSQFIALEGIDGSGTTTQLTRIAEALTKRGRVVTQTMEPSRGPIGTRIRDIL--RGEE 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   ++ A++FAA RLDH++  I PAL  G+++L DR+L SS AYQ       H+ L  +
Sbjct: 59  KTPPDSLALLFAADRLDHLQREIAPALQRGEVVLSDRYLISSLAYQSL-----HVELPFI 113

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-LD 179
           + I+ +   PD +I+L +  +   KR   R    E+   D     D+ + EK  Q +   
Sbjct: 114 EMINARARKPDVSILLKICPEEAAKRRATRGG--EAEIFD-----DLDLQEKISQAYDKA 166

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            AR+      IVD++ S   V   IL+ +  L
Sbjct: 167 FARSDLGPTAIVDASASMSDVTDAILSAIDSL 198


>gi|255994228|ref|ZP_05427363.1| dTMP kinase [Eubacterium saphenum ATCC 49989]
 gi|255993896|gb|EEU03985.1| dTMP kinase [Eubacterium saphenum ATCC 49989]
          Length = 138

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 5/138 (3%)

Query: 1   MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MNS   G FI+FEG++GAGK T I  +  +L        + REPGGT  +E  R +LL  
Sbjct: 1   MNSDGFGKFITFEGLDGAGKGTQIDKVMEYLSDIGRAAILVREPGGTQLSEQIREMLL-Q 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                   +E ++F +AR + +  VIRPAL  GK ++CDR++DS+ AYQG         +
Sbjct: 60  NEFAISPMSELLLFLSARAELISKVIRPALESGKDVVCDRYMDSTIAYQGYGRGLLSEAI 119

Query: 118 DSLQEISVQEVMPDCTII 135
            SL  I+   ++PD T  
Sbjct: 120 -SLNNIATGFLVPDITFF 136


>gi|123438337|ref|XP_001309954.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
 gi|121891703|gb|EAX97024.1| thymidylate kinase family protein [Trichomonas vaginalis G3]
          Length = 194

 Score =  168 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 21/209 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG +G+GK+T   LL          V     P  T       +  L    + 
Sbjct: 3   TRGKFILFEGCDGSGKSTQCKLLAN--SGLFPKVEQMCFPDRTTEIGQMINAYLKKSSNL 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EA  ++F A R + +   I+  L  G  ++CDR+  S   Y   +     + +D   
Sbjct: 61  VD-EAIHLLFTANRWE-LSPKIKELLNNGTTIICDRYYYSGVVYSAAKG----MDVDWCL 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  I +D+  ++         + R+    + +E+       K R++FL + 
Sbjct: 115 APEKGLPQPDLVIFIDISPEV--------QAKRKGFGEEIYEKT--EFQNKVRELFLSL- 163

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             + DR  I+D     + V+ +I  ++ E
Sbjct: 164 --KDDRWRIIDGNQPLEKVSEDIQKVIKE 190


>gi|28199448|ref|NP_779762.1| thymidylate kinase [Xylella fastidiosa Temecula1]
 gi|32129653|sp|Q87B89|KTHY_XYLFT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|28057563|gb|AAO29411.1| thymidylate kinase [Xylella fastidiosa Temecula1]
          Length = 208

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 17/217 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+GAGKTT    L   L+    +  V++EP   P     R    S     F  
Sbjct: 1   MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFSP 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  V    R  HVE++I P +  G +++ DR+  S  AYQG       L +D+L E +
Sbjct: 58  EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEAN 113

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                PD  ++LD+P  IGL+R+  R S       ++FE  + +   + R IFL +    
Sbjct: 114 AFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--EL 164

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           P +  ++D+  + ++V +  L +V E+++ R+  L +
Sbjct: 165 PSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 200


>gi|321309545|ref|YP_004191874.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1]
 gi|319801389|emb|CBY92035.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1]
          Length = 220

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 8/218 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLK--RFLQRKNYDVHVTREPGG--TPAAEAARHVLLSC 57
             GLF+ FEGI+G+GKTT I  LK  + +     ++  T EPGG         R ++L  
Sbjct: 7   RRGLFVVFEGIDGSGKTTLIKALKGSKKISEAYREILFTYEPGGKDNTFGNKIRDLILRE 66

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G      + +A++F A+R +H+E +I+PAL    +++CDR+  S+  YQG+ D  +  ++
Sbjct: 67  GNS-LSEKTQALLFLASRSEHLEKIIQPALDREALIICDRYYLSTLVYQGKGDLDRINWI 125

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              Q+       PD T  L+L  +  L R +N+   +E+  +D    +D +   K  +I 
Sbjct: 126 RKNQDFITFR-KPDITFFLNLSWEEYLSRYKNKVESQENNWMDKLIYEDYLRMCKSYEI- 183

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +  +   R  ++D   S  ++   I +++ E+   R
Sbjct: 184 -AMKEDISGRLILLDGGDSTNNLVKRIEDVLVEVANGR 220


>gi|225620556|ref|YP_002721813.1| thymidylate kinase [Brachyspira hyodysenteriae WA1]
 gi|254808280|sp|C0R1X1|KTHY_BRAHW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|225215375|gb|ACN84109.1| thymidylate kinase [Brachyspira hyodysenteriae WA1]
          Length = 203

 Score =  167 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 19/219 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EGI+G+GK++   +L   L         T EP         R  +LS      
Sbjct: 2   KGKLIVLEGIDGSGKSSIGMMLTDILNNIGIKSIYTFEPTHAYYGSKLRESMLSKD---L 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E E  +F A R +H++++IRPA+ +G +++ DR++ SS AYQG +      ++ +L +
Sbjct: 59  TPEEELSLFIADRKEHIKHMIRPAINDGYVIVLDRYMHSSIAYQGAK-GIDKEYIYNLHK 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD   IL L ++  L R+     + +   +D FE K     E+  +IF     
Sbjct: 118 DFI--LEPDLVFILHLNIETALNRI-----MEKRGFVDRFENKH--YLEEVDKIFSSF-- 166

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           N+P   H +D++   +S+   ILN + E    ++ PL S
Sbjct: 167 NEP-YMHHIDASKDQKSICDEILNTIKE---SKILPLDS 201


>gi|159028337|emb|CAO87235.1| tmk [Microcystis aeruginosa PCC 7806]
          Length = 207

 Score =  167 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58
              FI FEGI+G+G +T   LL+ +  ++     ++ EP         R +    L+S  
Sbjct: 2   KPKFIVFEGIDGSGTSTQAKLLQEYFFKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIQ 61

Query: 59  VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                    A +FAA R  H+ N    V +    E   ++  R+  SS AY      +  
Sbjct: 62  EQNQFDRQMAYLFAADRHYHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNC----NNP 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                +++++     PD  I +D+  DI L R++NR      A  + +E+++ ++  K R
Sbjct: 118 EEFAFVRQLNQHFPNPDIVIYIDVIPDISLARIKNR------AITEVYEKQEKLM--KVR 169

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           Q+F++I +   D    +D   + + +  NI+N + +L+
Sbjct: 170 QMFIEIFKEYKDNYLQLDGNDTIEHLHRNIINYLEQLI 207


>gi|298709115|emb|CBJ31061.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 228

 Score =  167 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 24/231 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G FI FEG++  GKTT  +LL   L++  +D    R P   TP        L +    
Sbjct: 13  KRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLRN--TT 70

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +       ++F+A R +  E+ IR  L  G  ++CDR+  S  A+   +       +   
Sbjct: 71  DIDDRCVHLLFSANRWE-AESKIRELLKAGTTVVCDRYAYSGVAFSASKPGLS---VRWC 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++       PD  + LD+ V+  +KR             + +E++        R  FL +
Sbjct: 127 KDPDRGLPAPDKILFLDISVEDAMKR--------GQFGEERYEKE--EFQRTVRATFLAL 176

Query: 181 ARNQPDR---CHIVDSAHSFQSVATNILNI----VWELVQKRVSPLSSKKD 224
                       ++D+     S+   I  I    V E+  K +  L S+K+
Sbjct: 177 MEEDKASGVAWQLIDANREIGSIQDEIQKIGTSVVGEVEGKEIGSLWSRKE 227


>gi|15920677|ref|NP_376346.1| thymidylate kinase [Sulfolobus tokodaii str. 7]
 gi|23821799|sp|Q975E6|KTHY1_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|15621460|dbj|BAB65455.1| 190aa long hypothetical thymidylate kinase [Sulfolobus tokodaii
           str. 7]
          Length = 190

 Score =  167 bits (424), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 23/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FISFEGI+GAGKTT    +   L++K Y+V +T+EP      E  +             
Sbjct: 3   RFISFEGIDGAGKTTLAKKVYEVLKKKGYNVILTQEPFTREITELIKK------AGWNDP 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++F+A R  H++ ++     + +I+L DR+  S+ AYQ      +      ++E++
Sbjct: 57  VLLTLLFSADRAFHIKWIME---QKPEIVLMDRYFHSTIAYQSVLGLDE----KWIEEVN 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +   PD   +LD+ V+  +KR++             FE + +   E  R+ +L++AR  
Sbjct: 110 SKFPKPDIVFLLDIKVNEAIKRIRKDDQFN-------FE-EKIATLEAVRKKYLELARKY 161

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                ++D+    + +    + I+  LV+
Sbjct: 162 --NFIVLDAMSKIEELTEKTVQIICSLVK 188


>gi|70606679|ref|YP_255549.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
 gi|76363220|sp|Q4JAC4|KTHY_SULAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|68567327|gb|AAY80256.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
          Length = 194

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 27/214 (12%)

Query: 5   LFI-SFEGIEGAGKTTHISLLKRFLQ---RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +FI SFEGI+G+GKTT   ++   L      N  + +T EP      +    +       
Sbjct: 1   MFIISFEGIDGSGKTTISKIIYEKLLIEIGSNKKIILTSEPFSQEIIKLIEEI------G 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                + A++F A R  H+  + +      +I++ DR++DS+ AYQ      +    + +
Sbjct: 55  WKDPISLALLFTADRAYHLNLLFK---QNPEIIIMDRYIDSTIAYQSSLGIDE----NWI 107

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLD 179
           + ++     PD TI+LDL  +  + R++N+        +D F   + +    K R+ +L+
Sbjct: 108 RNLNKYFPEPDLTILLDLKPETAIARIKNK--------VDKFNFDEKISTLSKVREKYLE 159

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A+   ++  IV++  S   +     +IV+  + 
Sbjct: 160 LAKRN-NKIRIVNAEKSIDEIVEETWSIVYSFLN 192


>gi|124486152|ref|YP_001030768.1| thymidylate kinase [Methanocorpusculum labreanum Z]
 gi|166221753|sp|A2ST45|KTHY_METLZ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|124363693|gb|ABN07501.1| thymidylate kinase [Methanocorpusculum labreanum Z]
          Length = 198

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 20/211 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGK+T    LK  LQ    +   T+EPG      A R  +          
Sbjct: 1   MLITLEGIDGAGKSTLYEGLKTRLQD--LEPVFTKEPGSPLVNSAVRREI----GANRDP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----SQHLFLDSL 120
            AEA +F A    H+  V+ PAL E K+++ DR+ DS +AYQ             +L ++
Sbjct: 55  FAEATLFVADHAAHLAQVVLPALEEKKLVISDRYSDSRFAYQQVSLIGIVPDPKAWLTAV 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +   V PD TI+L +  +  + R+  R         ++FE  D    E+ ++ +L+ 
Sbjct: 115 H--AGWSVRPDLTILLLISPETAMNRLHERP------GKEHFE--DPAFLEEVQKKYLER 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               P+R  ++D+A   +++   +   +  L
Sbjct: 165 VTEDPERFLLIDAAQEPETILDFVEKSIRAL 195


>gi|187736367|ref|YP_001878479.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835]
 gi|254808272|sp|B2UN87|KTHY_AKKM8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|187426419|gb|ACD05698.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835]
          Length = 206

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 17/207 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEGI+G GK+THI  L+++L+ K  +V  + EP         R    S     
Sbjct: 7   RKGRLIVFEGIDGTGKSTHIGHLRKYLEEKELEVVQSFEPTRGRWGRMLRD---SAVTGR 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E E  +F   R +HV+ +I PAL  G  +L DR+  S  AYQG R     +   + +
Sbjct: 64  LSVEEEVALFLKDRREHVKMLIAPALARGAWVLLDRYYLSMMAYQGARGIDPEVIRAANE 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E +    +PD  + LD+PV + L+R+ NR         D FE +  +     R +F   A
Sbjct: 124 EFA---PVPDAVVWLDIPVSVALERIGNRGER------DAFETEAGL--AACRSVF---A 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
                    +D+    + VA  +   +
Sbjct: 170 SVHAPWMLRIDADAGKEEVAARVRKAL 196


>gi|303244545|ref|ZP_07330879.1| thymidylate kinase [Methanothermococcus okinawensis IH1]
 gi|302485093|gb|EFL48023.1| thymidylate kinase [Methanothermococcus okinawensis IH1]
          Length = 195

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 28/211 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI FEGI+G+GKTT   LL   +  K      T EP      +  R +L     ++   
Sbjct: 4   KFIVFEGIDGSGKTTQSKLLAEKINGK-----YTCEPTNGDIGKLIRDILSGKKCEK--- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E  A++FAA R++HV + I   L +   ++CDR++ SS  YQ      Q + L+ +  I+
Sbjct: 56  ETLALLFAADRVEHVVD-IEQHLKK-THIVCDRYVYSSMVYQA----IQGIDLNFIMNIN 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN- 183
                PD  I LD+ V+   KR+  +         + FE K+++   K R  + +I +  
Sbjct: 110 QFAKKPDILIFLDVDVEESFKRMNGKNK-------EIFENKEML--NKVRAKYYEIIKKR 160

Query: 184 --QPDR-CHIVDSA-HSFQSVATNILNIVWE 210
             +P      +++   S + V  NIL  + E
Sbjct: 161 LFEPKYGYIKINTTGKSIEEVHDNILTELRE 191


>gi|261202488|ref|XP_002628458.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
 gi|239590555|gb|EEQ73136.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081]
 gi|239612282|gb|EEQ89269.1| thymidylate kinase [Ajellomyces dermatitidis ER-3]
          Length = 232

 Score =  166 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  ++L++ LQ   ++V   R P  T       +  L  G   
Sbjct: 11  QRGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTH 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     I+  +  G  ++ DR+  S   Y   +D    L LD   
Sbjct: 70  LDDHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKD-IPGLSLDWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
           +  +    PD  + L++  +   KR            L+ +E  +     + RQ+F  + 
Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGLERYE--NDTFQSRIRQLFQTLI 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           AR  PD  HI+D+  + + VA +++    + V+
Sbjct: 178 AREDPDNVHIIDAGRTEREVALDVIETARKAVE 210


>gi|319411558|emb|CBQ73602.1| related to thymidylate kinase [Sporisorium reilianum]
          Length = 1229

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 24/213 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG++ AGK+T +  L + L  K       + P  T A     +  L+    +
Sbjct: 429 KRGFFIVVEGLDRAGKSTQVERLAQHLHAK-----AIKFPERTTAIGQMINSYLAQ-TSD 482

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A  ++F+A R + V + I+  L  G+ ++CDR+  S  AY   +  S     D  +
Sbjct: 483 LDDQAIHLLFSANRWECVAS-IKKTLDAGESIVCDRYAFSGIAYSVAKGLSY----DWCR 537

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V   +PD T+ LDL  +    R             + +E+  +    K R  F  ++
Sbjct: 538 NPDVGLPLPDLTMFLDLDAETAAAR--------GGYGEERYEK--LDFQAKVRDAFTRVS 587

Query: 182 ---RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              R    R   +D++ +   V  +I   V  +
Sbjct: 588 QDVRAHGGRWVTIDASKTLDQVTDDIQKAVQRV 620


>gi|321452944|gb|EFX64236.1| hypothetical protein DAPPUDRAFT_231894 [Daphnia pulex]
          Length = 209

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 19/225 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  I  EG + +GKTT      R+LQ  N + H+ R P  +    +  +  L C  +
Sbjct: 2   IKRGALIVLEGCDRSGKTTLCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTE 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F+A R + + + I+  L +G  ++ DR+  S  A+   +    ++ L   
Sbjct: 62  -LDDYAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSAAK---PNMDLRWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q+     + PD  I LD+       R             + +E  ++ + +  R  +L +
Sbjct: 117 QQSDSGLLKPDLVIFLDIDPVEAQTR--------GQYGSERYE--NLEMQKVVRSNYLKL 166

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
              Q +   +VD++ S + V  ++  +V E +   ++P S+ K +
Sbjct: 167 ---QDESWKVVDASRSMEEVGRDVCRLVQEAL-DNITPDSALKQL 207


>gi|321455804|gb|EFX66927.1| hypothetical protein DAPPUDRAFT_331571 [Daphnia pulex]
          Length = 212

 Score =  165 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 19/221 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  I  EG + +GKTT      R+LQ  N + H+ R P  +    +  +  L C  +
Sbjct: 2   IKRGALIVLEGCDRSGKTTQCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTE 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F+A R + + + I+  L +G  ++ DR+  S  A+   +    ++ L   
Sbjct: 62  -LDDHAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSASK---PNMDLRWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q+     + PD  I LD+       R             + +E  ++ + +  R  +L +
Sbjct: 117 QQSDSGLLKPDLVIFLDINPVEAQTR--------GQYGSERYE--NLEMQKIVRSNYLKL 166

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
              Q +   +VD++ S + V  ++  +V E +   ++P S+
Sbjct: 167 ---QDESWRVVDASRSMEEVWRDVCRLVQEAL-DNITPDSA 203


>gi|258545273|ref|ZP_05705507.1| dTMP kinase [Cardiobacterium hominis ATCC 15826]
 gi|258519486|gb|EEV88345.1| dTMP kinase [Cardiobacterium hominis ATCC 15826]
          Length = 205

 Score =  165 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 8/211 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG FI+ +G EG GK+T ++ ++ +           REPGGTP  E  R +LL    D  
Sbjct: 2   SGRFITLDGSEGVGKSTQLANIQAWCTAHGITARYGREPGGTPLGERLRAILLDRTTDA- 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++  AAR  H++  I PAL  G+  + DR+ D++YAYQ    S     L +L+ 
Sbjct: 61  DPLTELLLLLAARRAHLQQTILPALARGEWYISDRYRDATYAYQHYGRSIPLTTLSALET 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            S  +  PD  +IL    D    R+  R      A  D FE +D     +    + + A+
Sbjct: 121 ASETDRDPDLALILGSSADTARDRLAQR-----GAAQDRFEAEDADFFVRVAAGYRERAQ 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                   +D+    Q+V   I   +  L Q
Sbjct: 176 APHAVW--IDAEGDEQTVFARIRPHLEALRQ 204


>gi|255536995|ref|XP_002509564.1| thymidylate kinase, putative [Ricinus communis]
 gi|223549463|gb|EEF50951.1| thymidylate kinase, putative [Ricinus communis]
          Length = 264

 Score =  165 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 21/221 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI  EG++ +GKT+    L  +L+R  ++  + R P  T          LS    +
Sbjct: 57  SRGAFIVLEGLDRSGKTSQCGKLVSYLERLGHETELWRFPDRTTTIGQMISAYLS-NQSQ 115

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++++A R +   +++   L  G  L+ DR+  S  A+   +     L  +  +
Sbjct: 116 LDDRTIHLLYSANRWE-KNSLMETKLKSGTTLIVDRYSYSGVAFSAAKG----LDFEWCK 170

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +  + PD  + LD+P +   +R             + +E+  +    K    +  + 
Sbjct: 171 APEIGLLAPDLVLYLDIPPEKAAER--------GGYGGERYEK--LEFQMKVGNCYQTLR 220

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE--LVQKRVSPLS 220
            +      I+D++   + V   I  IV +  L  ++  PLS
Sbjct: 221 DSS---WEIIDASQPMEEVQKQIQEIVLDHVLASEKGKPLS 258


>gi|327353237|gb|EGE82094.1| thymidylate kinase [Ajellomyces dermatitidis ATCC 18188]
          Length = 225

 Score =  164 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  ++L++ LQ   ++V   R P  T       +  L  G   
Sbjct: 4   RGGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTH 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     I+  +  G  ++ DR+  S   Y   +D    L LD   
Sbjct: 63  LDDHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKD-IPELSLDWAW 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
           +  +    PD  + L++  +   KR            L+ +E  +     + RQ+F  + 
Sbjct: 121 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGLERYE--NDTFQSRIRQLFQTLI 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           AR  PD  HI+D+  + + VA +++    + V+
Sbjct: 171 AREDPDNVHIIDAGRTEREVALDVIETARKAVE 203


>gi|156096007|ref|XP_001614038.1| thymidylate kinase [Plasmodium vivax SaI-1]
 gi|148802912|gb|EDL44311.1| thymidylate kinase, putative [Plasmodium vivax]
          Length = 219

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 19/211 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G FI FEG++ +GK+T   LL   L+RKN +V H+      TP  +     L      
Sbjct: 14  KKGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQS-- 71

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E   ++F+A R + +   I+  L  G  ++CDR+  S  AY               
Sbjct: 72  DMTNETIHLLFSANRWELMGE-IKRLLASGVWVVCDRYAYSGVAYSAGALKLSKT---WC 127

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD    L++P +    R             + +E+  V + ++  + + + 
Sbjct: 128 MNPDQGLIKPDVVFYLNVPPNYAQNR--------SEYGEEIYEK--VEVQKRIYETYKNF 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++   D    +D   +   +  +++N + +L
Sbjct: 178 SQE--DYWINLDGTKNIDDIHQDVINEITKL 206


>gi|221062039|ref|XP_002262589.1| thymidylate kinase [Plasmodium knowlesi strain H]
 gi|193811739|emb|CAQ42467.1| thymidylate kinase, putative [Plasmodium knowlesi strain H]
          Length = 219

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 19/211 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G FI FEG++ +GK+T   LL   L+RKN +V H+      TP  +     L     +
Sbjct: 14  KKGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLK--MQN 71

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E   ++F+A R + +   I+  L +G  ++CDR+  S  AY               
Sbjct: 72  DMTNETIHLLFSANRWELMGE-IKRLLSKGVWVVCDRYAYSGVAYSSGALKLSKT---WC 127

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD    L++P +   +R             + +E+  V + ++  + + + 
Sbjct: 128 MNPDQGLIKPDVVFYLNVPPNYAQQR--------SEYGEEIYEK--VEVQKRIYEAYKNF 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++   D    +D   +   +  +++N + +L
Sbjct: 178 SQE--DYWINLDGTKNINDIHQDVVNEITKL 206


>gi|67902452|ref|XP_681482.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
 gi|40739679|gb|EAA58869.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4]
          Length = 227

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 26/233 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59
            G  I  EG++ AGK++    L   LQ     V   R PG +  A   R  L+     G 
Sbjct: 10  RGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPGDSSFARTLRRKLIDGYLRGQ 69

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                 +  ++F+A R + V   I   +  G  ++ DR+  S   Y   + ++  L L+ 
Sbjct: 70  SHLDDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEW 127

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-- 177
             +  V    PD  + L +  +   KR             + +E +   +  + R++F  
Sbjct: 128 AWQPEVGLPKPDLCLFLSISPEEAAKR--------GGFGGERYENE--AMQTRVRELFNT 177

Query: 178 ---LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLSSKKDI 225
              L  A +      I+D+  S   V+ +ILN+V E +      SPL     I
Sbjct: 178 IFDLQRATD----IRIIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 226


>gi|70984984|ref|XP_747998.1| thymidylate kinase [Aspergillus fumigatus Af293]
 gi|66845626|gb|EAL85960.1| thymidylate kinase [Aspergillus fumigatus Af293]
 gi|159126077|gb|EDP51193.1| thymidylate kinase [Aspergillus fumigatus A1163]
          Length = 221

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 17/226 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G  I FEG++ AGK++    L+  LQ   + V   R P   TP  +     L   G  
Sbjct: 6   NRGALIVFEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + +   I   +  G  ++ DR+  S   Y   +  + +L L+  
Sbjct: 64  QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNPNLSLEWA 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD  + L +  +   KR            ++ +E + +    + R++F  +
Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAKR--------GGFGVERYENETM--QNRVRELFQTL 171

Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
               Q D  H +D+  SF +V+ +I+ IV + +  R+  +   K +
Sbjct: 172 FDLQQGDYIHTIDAGRSFDAVSQDIMKIVTDYI-GRLDAMGPLKRL 216


>gi|82492135|gb|ABB77932.1| thymidylate kinase [Environmental halophage 1 AAJ-2005]
          Length = 192

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 20/194 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EG++ +GKTT    +   L+ +  D   TREP  T           S   +    
Sbjct: 1   MLVTLEGLDESGKTT----VTEALRSQFPDATYTREPTETWNGSVVNK---SVETEHEEP 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEI 123
            AE  ++ A    H+   IRPAL +GK+++ DR+ DS  AYQG     +    ++ ++ I
Sbjct: 54  VAELFMYTADHATHLSETIRPALNQGKLVISDRYTDSRCAYQGATLEDEFAHPMEYIRGI 113

Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD T+ LD+  +    R +       +  +D           K R+ +  +  
Sbjct: 114 HGEFTREPDLTLYLDIDAETAASREKA------AKGVDR-----TEYLSKVRENYERLIA 162

Query: 183 NQPDRCHIVDSAHS 196
             PDR   +D+  S
Sbjct: 163 THPDRFVRIDATQS 176


>gi|313246105|emb|CBY35059.1| unnamed protein product [Oikopleura dioica]
          Length = 212

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 22/229 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59
           M  G  I FEG++ +GK+T I  +   +  K  +VH+TR P  T    +     L S   
Sbjct: 1   MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSS-- 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++   +A  ++F+A R +H    I   +  G  +L DR+  S  A+   +     L L+ 
Sbjct: 59  NDLSDQAIHLLFSANRWEH-AQSILNYMNNGTSVLVDRYAFSGVAFTAAKG----LDLEW 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +        PD  + LD+  +   KR             + +E+  V    + R+++  
Sbjct: 114 CKNPDRGLPKPDLVLQLDVDEETAKKR--------GGFGEERYEK--VEFQRQVRKLYSQ 163

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224
           +     D   I+D++ S   +   +   V E ++    K +  L  KKD
Sbjct: 164 LREEHSDIWKIIDASGSVDELTPALQTHVDETIKSCQNKDIEKLWIKKD 212


>gi|154308900|ref|XP_001553785.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10]
 gi|150852604|gb|EDN27796.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10]
          Length = 242

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 24/225 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59
           ++ G FI  EG++ AGKTT +  L   L     +V + R P  T    +     L S   
Sbjct: 18  ISRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDRTTAIGQQINSYLQSS-- 75

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
                ++  ++F+A R +  +  IR  + +G  ++CDR+  S   Y   +   DS  HL 
Sbjct: 76  TALPDQSIHLLFSANRWEKAQE-IRDLIAQGYTIVCDRYYYSGMIYTSSKYSIDSPNHLS 134

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+  +   +   MPD  I LDL  +   KR             + +E +   +  + R  
Sbjct: 135 LEWCKNPEIGLPMPDRVIFLDLEPEEAEKR--------GGYGDEKYETR--EMQRRVRNG 184

Query: 177 FLDIAR------NQPDRC-HIVDSAHSFQSVATNILNIVWELVQK 214
           FL +         Q  R    +D+      VA  I + V ++V++
Sbjct: 185 FLSLQNSAVPGFEQEQRIMKAIDAGDGLDEVAEKIWHAVKDIVEQ 229


>gi|150400777|ref|YP_001324543.1| dTMP kinase [Methanococcus aeolicus Nankai-3]
 gi|166221752|sp|A6UTV9|KTHY_META3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|150013480|gb|ABR55931.1| dTMP kinase [Methanococcus aeolicus Nankai-3]
          Length = 196

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 29/215 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI FEGI+G+GKTT   LL  +L         T EP      +  R VL   G  
Sbjct: 1   MNK--FIVFEGIDGSGKTTQAKLLADYLNG-----IYTCEPTNGEIGQLIRKVL---GGK 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E+ A++FA  R++H++ +    +    +++CDR++ SS  YQ         F+ S+
Sbjct: 51  NCEKESLALLFAGDRVEHIKEIEHKLIEN--MVICDRYVYSSMVYQSI-QGIDIDFIASI 107

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              +    +PD  I LD+ ++  LKR+ +R S       + FE K+++  +K  + +++I
Sbjct: 108 NRFAK---IPDVLIYLDVSIEESLKRMGDRDSK------EIFENKEIL--QKVNKKYMNI 156

Query: 181 ARN---QPDR-CHIVDS-AHSFQSVATNILNIVWE 210
                 +P     ++++   + + V   I+  + +
Sbjct: 157 INERLFEPKNGYILINTDNKTVEEVHKEIIKKLMD 191


>gi|313229292|emb|CBY23878.1| unnamed protein product [Oikopleura dioica]
          Length = 212

 Score =  162 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 20/228 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG++ +GK+T I  +   +  K  +VH+TR P  T       +  L    D
Sbjct: 1   MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +A  ++F+A R +H    I   +  G  +L DR+  S  A+   +     L L+  
Sbjct: 61  -LSDQAIHLLFSANRWEH-AQSILNYMNNGTSVLVDRYAFSGVAFTAAKG----LDLEWC 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  + LD+  +   KR             + +E+  V    + R+++  +
Sbjct: 115 KNPDRGLPKPDLVLQLDVDEETAKKR--------GGFGEERYEK--VEFQRQVRKLYSQL 164

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224
                D   I+D++ S   +   + N V E ++    K +  L  K+D
Sbjct: 165 REEHSDIWKIIDASASVDELTPALQNHVDETIKSCQNKDIEKLWIKRD 212


>gi|242792112|ref|XP_002481887.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
 gi|218718475|gb|EED17895.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500]
          Length = 238

 Score =  162 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 24/229 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  +  EG++ AGK++   LL + L   NY     R P   TP  +     L   G  
Sbjct: 11  KRGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYL--RGQS 68

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + +   I   +  G  ++ DR+  S   Y   +  + +L L   
Sbjct: 69  QLDDHSIHLLFSANRWE-LAQSIHEYIANGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWA 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V    PD  + L +  +   KR            ++ +E     + ++ R++FL +
Sbjct: 127 WQPEVGLPRPDLCLFLSISPEEAAKR--------GGYGVERYE--TDSMQKRVRELFLSL 176

Query: 181 ARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220
                 D   ++D+  S   VA +IL+ V E ++        K++ P +
Sbjct: 177 LDLPHNDEICVIDAGQSVDEVAQDILDPVLECMKNVDSIGPLKKLGPWT 225


>gi|240277647|gb|EER41155.1| thymidylate kinase [Ajellomyces capsulatus H143]
 gi|325093734|gb|EGC47044.1| thymidylate kinase [Ajellomyces capsulatus H88]
          Length = 232

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  + L++ LQ + ++V   R P  T       +  L     +
Sbjct: 11  QRGALIVLEGLDRAGKSTQCASLQKTLQEEGHEVKYRRFPDRTTEIGKLINAYL-MQNAQ 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R +     I+  +  G  ++ DR+  S   Y   + +   L L+   
Sbjct: 70  LDDHSIHLLFSANRWEAAAE-IQRDISNGITVIIDRYSYSGAVYSAAK-NIPGLSLEWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
           +  +    PD  + L++  +   KR            ++ +E  +     + RQ+F ++ 
Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGMERYE--NDAFQTRIRQLFQELV 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           AR  P+  H+VD++ +   VA +++      +++
Sbjct: 178 AREDPNNVHVVDASRAESEVALDVIRAARRAIEE 211


>gi|29135124|ref|NP_803754.1| ORF188 [Pseudomonas phage phiKZ]
 gi|18996653|gb|AAL83089.1|AF399011_188 PHIKZ188 [Pseudomonas phage phiKZ]
          Length = 352

 Score =  162 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 16/228 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--G 58
           MN GLF+  EG EG GKTT   ++   L+++NYDV   REPGGT  +E  R +L+     
Sbjct: 1   MN-GLFVCIEGTEGVGKTTVTKMVVEELRKRNYDVVAMREPGGTATSEKIRQMLIWPEFK 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-----YQGERDSSQ 113
            +    E + ++ +A R+ +VEN+IRPAL + KI++ +RF+ S+YA     ++       
Sbjct: 60  DEVRPPEFDVLMHSAGRMLNVENIIRPALKDDKIVITERFIASTYALNVVPFEETNPYLS 119

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            LF+D LQ        P  T  L  P ++  KR++ R        LDY+E K      K 
Sbjct: 120 KLFMDILQGTLHSIPEP-ATFFLTAPEEVRKKRIEMRD-----RGLDYYESKGSSYFNKV 173

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            + +  +  NQP    +VD+      +   I+  +  L  K+ +  SS
Sbjct: 174 DEGYGRLI-NQPSSI-VVDTNRDLDIIVNEIVESIIFLRDKQKNKQSS 219


>gi|121718363|ref|XP_001276187.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
 gi|119404385|gb|EAW14761.1| thymidylate kinase [Aspergillus clavatus NRRL 1]
          Length = 221

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 24/229 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ AGK++    L+  LQ   Y V   R P   TP  +     L   G  
Sbjct: 6   KRGALIVVEGLDRAGKSSQCERLRDSLQASGYSVKYIRFPDRTTPIGQLINGYL--QGQS 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +  ++F+A R + +   I   +  G  ++ DR+  S   Y   +  +Q+L L+  
Sbjct: 64  HLDDHSIHLLFSANRWE-IARTIENDIANGVTVIVDRYSYSGAVYSAAK-GNQNLSLEWA 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD  + L +  +   KR            ++ +E + +    + R++F  +
Sbjct: 122 WQPEIGLPQPDICLFLRISPEEAAKR--------GGFGIERYENEKM--QSRVRELFQTL 171

Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220
            + Q  D  H+VD+  +  +V+ +IL  V   ++        KR+ P++
Sbjct: 172 FKLQLGDYIHMVDAGRTLDAVSQDILQTVTACLETIDATAPLKRLGPIA 220


>gi|284175009|ref|ZP_06388978.1| dTMP kinase [Sulfolobus solfataricus 98/2]
 gi|261602452|gb|ACX92055.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
          Length = 189

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 26/208 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
             I+ EGI+G+GKTT  +LLK +L+ K   +V VTREP      +    +          
Sbjct: 3   KLIAIEGIDGSGKTTLANLLKEYLESKMKLNVIVTREPFSEDIIKLIEKI------GWND 56

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++FAA R  HV  + +  +    +++ DR+  SS AYQG     +      ++ +
Sbjct: 57  PILLVLLFAADRALHVNWLSK--IRNADLIILDRYYFSSIAYQGALGVDE----KWIKTV 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLDIAR 182
           +     PD  I+LDLP+++ + R++N          D F   + +    K R+ +L +A+
Sbjct: 111 NSYFPKPDMVILLDLPIEVAISRIKN----------DKFNFEEKIKSLAKVREKYLKLAK 160

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
                 +IVD+      V    + I+ +
Sbjct: 161 EY--NFYIVDANKDKNEVLEQTIKIIQK 186


>gi|149923263|ref|ZP_01911673.1| thymidylate kinase [Plesiocystis pacifica SIR-1]
 gi|149815860|gb|EDM75380.1| thymidylate kinase [Plesiocystis pacifica SIR-1]
          Length = 210

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 14/213 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62
            F+ FEGI+G+G TT +  +   L+ + + V  TR+P   P     R +L          
Sbjct: 7   RFLVFEGIDGSGTTTQLRRVSEALRERGHRVVETRQPSPGPIGALTRELLAVDGGKARTV 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G E  A++FAA RL+H+  V+ PAL EG ++LCDR++ SS+ YQ             ++ 
Sbjct: 67  GPEGLALMFAADRLEHLARVVEPALSEGAVVLCDRYVVSSWVYQSL-----DCDRAWVRT 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+     PD T + DL  +I L              ++ F+        +    +  +  
Sbjct: 122 INTHARWPDRTYVFDLDPEIALA-RVAARRAETGQVVERFD--VPDTQRRLAAGYRAVLD 178

Query: 183 NQPDRCHI-VDSAHSFQSVATNILNIVWELVQK 214
                  + VD+A S  +V T I   V +L+ +
Sbjct: 179 EADLSGLVAVDAAASIDAVTTAI---VEDLLAQ 208


>gi|156044845|ref|XP_001588978.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980]
 gi|154694006|gb|EDN93744.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 242

 Score =  161 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 24/225 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           ++ G FI  EG++ AGKTT +  L   L     +V + R P   T   +     L S  +
Sbjct: 18  LSRGSFILIEGLDRAGKTTQVRKLCDRLYASGRNVKLMRFPDRTTSIGQQINSYLQSSTI 77

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
                +A  ++F+A R +  +  I   + +G  ++CDR+  S   Y   +   DS  HL 
Sbjct: 78  --LPDQAIHLLFSANRWEKAQE-IHQFIAQGYTIVCDRYYYSGMIYTSSKYPTDSPNHLS 134

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+  +   +   MPD  I LDL  +   KR             + +E +   +  + R  
Sbjct: 135 LEWCKNPEIGLPMPDKVIFLDLEPEEAEKR--------GGYGDEKYETR--EMQRRVRDG 184

Query: 177 FLDIARN-----QPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214
           FL +        + +R     +++      VA  I + V  LV++
Sbjct: 185 FLRLQNTAIKGFEHERSIMKAINAGSGVDEVAEKIWDTVVTLVEQ 229


>gi|16331301|ref|NP_442029.1| hypothetical protein slr0379 [Synechocystis sp. PCC 6803]
 gi|1001473|dbj|BAA10099.1| slr0379 [Synechocystis sp. PCC 6803]
          Length = 236

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 13/215 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDE 61
           LFI  EGI+G+GKTT   LL    QR+     ++ EP   P     R  L   L    D 
Sbjct: 28  LFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYNDA 87

Query: 62  FGAEAEA-IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              EA+   +FAA R  H+    + +   L +   ++  R+  SS AY            
Sbjct: 88  RQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCH----TEADW 143

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + +Q ++     PD  I LDLPVD+ L+R+ +R  L + A  + +E+++ +I     + +
Sbjct: 144 EFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLI--SVHRNY 201

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             I  +   +   +D++   + +   I+  V E++
Sbjct: 202 DRIFAHYQGQLCRLDASLPVEQLHQAIITKVEEML 236


>gi|15897682|ref|NP_342287.1| thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
 gi|227830328|ref|YP_002832108.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|229579145|ref|YP_002837543.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|229582100|ref|YP_002840499.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
 gi|284997753|ref|YP_003419520.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
 gi|11133144|sp|Q9UXG7|KTHY1_SULSO RecName: Full=Probable thymidylate kinase 1; AltName: Full=dTMP
           kinase 1
 gi|6015696|emb|CAB57523.1| thymidylate kinase [Sulfolobus solfataricus P2]
 gi|13813955|gb|AAK41077.1| Thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2]
 gi|227456776|gb|ACP35463.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|228009859|gb|ACP45621.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|228012816|gb|ACP48577.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
 gi|284445648|gb|ADB87150.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
          Length = 189

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 26/208 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
             I+ EGI+G+GKTT  +LLK  L+ K   +V VTREP      +    +          
Sbjct: 3   KLIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREPFSEDIIKLIEKI------GWND 56

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++FAA R  HV  + +  + +  +++ DR+  SS AYQG     +      ++ +
Sbjct: 57  PILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQ----WIKMV 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLDIAR 182
           +     PD  I+LDLP+++ + R++N          D F   + +    K R+ +L +A+
Sbjct: 111 NSYFPKPDMVILLDLPIEVAISRIKN----------DKFNFEEKIKSLAKVREKYLKLAK 160

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
                 ++VD++     V    + I+ +
Sbjct: 161 EY--NFYVVDASKDKNEVLEQAIKIIQK 186


>gi|225557103|gb|EEH05390.1| thymidylate kinase [Ajellomyces capsulatus G186AR]
          Length = 232

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  + L++ LQ + ++V   R P  T       +  L     +
Sbjct: 11  QRGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLINAYL-MQNAQ 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R +     I+  +  G  ++ DR+  S   Y   + +   L L+   
Sbjct: 70  LDDHSIHLLFSANRWEAAAE-IQRDISNGITVIIDRYSYSGAVYSAAK-NIPGLSLEWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
           +  +    PD  + L++  +   KR            ++ +E  +     + RQ+F ++ 
Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGMERYE--NDAFQTRIRQLFQELV 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           AR  P+  H+VD+  +   VA +++      +++
Sbjct: 178 AREDPNNVHVVDAGRAESEVALDVIRAARRAIEE 211


>gi|310799971|gb|EFQ34864.1| thymidylate kinase [Glomerella graminicola M1.001]
          Length = 271

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 33/231 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI+FEG++ +GKTT + LL++        V V R P  T          L   V+  
Sbjct: 39  RGAFIAFEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRTTPIGQMIDAYLKSSVE-M 97

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R + V+N I+  L  G  ++CDR+  S   Y   + +  HL L   ++
Sbjct: 98  EDHVIHLLFSANRWEAVKN-IQTLLASGTTVICDRYYHSGIVYSAAKQN-PHLTLHWARQ 155

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA- 181
             +    PD  + LDL   I  +R             + +E+       + R +F  ++ 
Sbjct: 156 PELGLPRPDLVLFLDLEEAIARER--------GGWGDEVYEK--AEFQRRVRDLFWGLSL 205

Query: 182 -------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                              R + +   +VD+  S + VA  I   V   V+
Sbjct: 206 GRVGPDGGLGEKGRVDREFRQEEEDLVVVDAGASVEEVAEEIWRKVGPRVE 256


>gi|70607738|ref|YP_256608.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
 gi|68568386|gb|AAY81315.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639]
          Length = 213

 Score =  161 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 17/219 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I+FEGI+G+GK++  SLLK +L ++ Y    T         +  +        +  
Sbjct: 2   KGILIAFEGIDGSGKSSQASLLKSWLSKRRYTFI-TEWNSSEWIHDIIKEA---KKKNLL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                +++ A    D  E  I P L  G +++ DR++ ++YA    RDS + + ++ +++
Sbjct: 58  TPLTFSLIHATDFADRYEKYILPMLKCGFVVIADRYIYTAYA----RDSVRGVDIEWVKK 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDYF-----ERKDVMIHEKRRQ 175
           +    V PD T  + +P ++ LKR+++  R      A  D F     E   +       +
Sbjct: 114 LYSFAVKPDITFYIRVPSEVALKRLKSSRRQIKPTEAGADVFPNLTPEEGFIKYQSSIIE 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++  IA    +   +VD     + V + I   V EL ++
Sbjct: 174 VYDRIAEE--NNFVVVDGTKDPRQVQSEIRGKVMELWRR 210


>gi|167957240|ref|ZP_02544314.1| thymidylate kinase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 208

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 10/214 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G +I  EG +G GK+T I LLK+FL +K +      EPG T      R ++ +  +   
Sbjct: 2   RGKYIVIEGSDGTGKSTQIDLLKKFLNKKGFISKTIHEPGETAIGIELRKIIKNKNLPR- 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A    ++F AAR + +  +I   L +G+ ++  R   S+  YQG  +      +  +  
Sbjct: 61  SARTNLLLFTAARCE-LAPIIENHLNKGEWVISSRNWLSTVVYQGYGEGIDINEIKQITA 119

Query: 123 ISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +  +  D T++L    D    R+ NR      +  D FE K      K  + +  I
Sbjct: 120 LFTNKSYLQTDLTLVLYANTDTLRSRIINRND---KSYRDTFESKPDNFQCKLNKGYQKI 176

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQ 213
             +       +++   +   V   I+  +  ++ 
Sbjct: 177 IADF--NLPAINTNDKTIDEVHNEIVKHISNILN 208


>gi|320537300|ref|ZP_08037256.1| thymidylate kinase [Treponema phagedenis F0421]
 gi|320145870|gb|EFW37530.1| thymidylate kinase [Treponema phagedenis F0421]
          Length = 214

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 23/215 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           FI FEGI+G G T+ + LL+           V  T+EP  T   +  R  L         
Sbjct: 11  FIVFEGIDGTGTTSQLRLLRERFASIGKAEKVVFTQEPTDTEIGKLIRKAL--SKELSLE 68

Query: 64  AEAEAIVFAAARLDHVEN--VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            +  A +FAA R +H+     I      GK +  DR+  SS AYQG             +
Sbjct: 69  QKTIAQLFAADRTEHIYGNAGIIEHTANGKAVFSDRYFFSSLAYQGLSVGKSLA-----K 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++    +P+     D+PV   + R+  R   +E      +E+KD       RQ +L I 
Sbjct: 124 KLNEDFPLPELLFFFDIPVQTSMSRIDKRGLQKEI-----YEKKD--FQTAVRQEYLRII 176

Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWEL 211
                         +D+    Q +   I + V  L
Sbjct: 177 EEYEKSAPEMQIIRIDAEKDIQEIHQKIWSFVENL 211


>gi|213419385|ref|ZP_03352451.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 133

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 7/140 (5%)

Query: 78  HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD 137
            VE VI+PAL +G  ++ DR   S+ AYQG         L +L++  + +  PD T+ LD
Sbjct: 1   LVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLD 60

Query: 138 LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF 197
           +  ++GLKR + R        LD  E++      + R  +L++A     R   +D+    
Sbjct: 61  VTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELAAQD-SRIRTIDATQPL 113

Query: 198 QSVATNILNIVWELVQKRVS 217
            +V  +I   V + VQ++ +
Sbjct: 114 DAVMRDIRATVTKWVQEQAA 133


>gi|223985441|ref|ZP_03635501.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM
           12042]
 gi|223962584|gb|EEF67036.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM
           12042]
          Length = 143

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 6/148 (4%)

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           +++AAAR  H+   + PAL  GK+++CDRF+DSS AYQG   +     + S+ E +++  
Sbjct: 1   MLYAAARRQHLIEKVLPALEAGKVVICDRFVDSSLAYQGFGRNLGIEEVLSINEFAIEGH 60

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD T+ LDL    GL R+  R +       D  +++ +  H +  + +  +     +R 
Sbjct: 61  WPDKTLYLDLAPQQGLDRIATRQNK------DRLDQEKIDFHLRVCEGYRQVRDRFAERM 114

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216
            ++D+A     V  + +  +  L+ + V
Sbjct: 115 IVIDAAQPVDQVIADCVKAIGALIHREV 142


>gi|295666950|ref|XP_002794025.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01]
 gi|226277678|gb|EEH33244.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01]
          Length = 232

 Score =  160 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 16/223 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  +LL++ LQ++ ++V   R P  T A     +  L  G   
Sbjct: 11  QRGALIVVEGLDRAGKSTQCALLQKTLQQEGHEVKYRRFPNRTTAIGKLINAYL-VGDSH 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R +  +  IR  +  G  ++ DR+  S   Y   +D    L LD   
Sbjct: 70  LDDHSIHLLFSANRWEAAKE-IRKDISNGISIIIDRYSYSGAVYSAAKD-VPGLSLDWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-I 180
           +  +    PD  + L++  +   +R            L+ +E  + ++  + RQ+F   I
Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAARR--------GGYGLERYE--NDILQARVRQLFQTFI 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221
            R  P+   ++++  S   VA +IL+   + ++K   + PL S
Sbjct: 178 EREDPENVCVINAGRSEVDVAQDILSEARKAIKKIQAIGPLRS 220


>gi|46130830|ref|XP_389146.1| hypothetical protein FG08970.1 [Gibberella zeae PH-1]
          Length = 270

 Score =  160 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 92/233 (39%), Gaps = 34/233 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G FI  EG++ +GKTT + LL++    +   V V R P   TP  +   + L S    
Sbjct: 22  NRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDNYLKS--NV 79

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E       ++F+A R + V+  I+  L  G  +LCDR+  S   Y   + +   L L   
Sbjct: 80  EMDDHVIHLLFSANRWEAVKQ-IQSLLASGTTILCDRYYHSGIVYSAAKQN-PSLTLPWA 137

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--- 177
           +        PD  + LDL  +    R             + +ER  +   ++ R++F   
Sbjct: 138 RAPERGLPRPDLVLFLDLTEEQAQAR--------GGWGGEVYERSGM--QKRVRELFWGL 187

Query: 178 ----LDIAR------------NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                DIA              + +   +VD+  S + V   +   V   V++
Sbjct: 188 SMGGKDIAAQGLGLDEGEGWTQEEEDLVVVDAGGSVEEVNEEVWKKVRARVEQ 240


>gi|312136656|ref|YP_004003993.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
 gi|311224375|gb|ADP77231.1| thymidylate kinase [Methanothermus fervidus DSM 2088]
          Length = 196

 Score =  160 bits (407), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+FEGI+G+GKTT    +  +L+R  Y V     P      + A+ +L   G  ++  
Sbjct: 1   MYIAFEGIDGSGKTTICKYISSYLRRNGYKVLTVGFPSNNEIGKLAKKMLK--GEIKWNE 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++  A  L    + I+  L  G I+L DR   SS AY       +    + +++I 
Sbjct: 59  IAFELLITADMLQ-CNHKIKKFLKNGGIVLSDRSPYSSIAY-------RPHLRNWIEKIH 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD  I LD+ VD  LKR+            D +E+K     E  R+ +L +++  
Sbjct: 111 KPLIKPDIVIFLDVSVDNALKRIYK---------HDKYEKKK--YLEIARRTYLRLSKEL 159

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ-KRVSPLSSK 222
                 +++  +F+ V  ++ +I+   V+ KR+S   S+
Sbjct: 160 --NFVKINANKNFKKVFLDVKHIIESSVKNKRLSLRPSQ 196


>gi|227827632|ref|YP_002829412.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|229584836|ref|YP_002843338.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238619800|ref|YP_002914626.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|227459428|gb|ACP38114.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|228019886|gb|ACP55293.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238380870|gb|ACR41958.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|323474682|gb|ADX85288.1| dTMP kinase [Sulfolobus islandicus REY15A]
 gi|323477416|gb|ADX82654.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
          Length = 189

 Score =  160 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 26/208 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
             I+ EGI+G+GKTT  +LLK  L+ K   +V VTREP      +    +          
Sbjct: 3   KLIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREPFSEDIIKLIEKI------GWND 56

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++FAA R  HV  + +  + +  +++ DR+  SS AYQG     +      ++ +
Sbjct: 57  PILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQ----WIKMV 110

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLDIAR 182
           +     PD  I+LDLP+++ + R++N          D F   + +    K R+ +L +A+
Sbjct: 111 NSYFPKPDMVILLDLPIEVAISRIKN----------DKFNFEEKIKSLAKVREKYLKLAK 160

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
                 +IVD++     V    + I+ +
Sbjct: 161 EY--NFYIVDASKDKNEVLEQAIKIIQK 186


>gi|226287197|gb|EEH42710.1| thymidylate kinase [Paracoccidioides brasiliensis Pb18]
          Length = 232

 Score =  160 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 16/223 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  +LL++ LQR+ ++V   R P  T A     +  L  G  +
Sbjct: 11  QRGALIVVEGLDRAGKSTQCALLQKTLQREGHEVKYRRFPDRTTAIGKLINAYL-VGDSQ 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R +  +  I+  +  G  ++ DR+  S   Y   +D    L LD   
Sbjct: 70  LDDHSIHLLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKD-VPGLSLDWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-I 180
           +  +    PD  + L++  +   +R            L+ +E  + ++  + RQ+F   I
Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAARR--------GGYGLERYE--NDILQARVRQLFQTFI 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221
            R  P    ++++  S   VA +IL+   + ++K   + PL S
Sbjct: 178 EREDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 220


>gi|241889738|ref|ZP_04777036.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
 gi|241863360|gb|EER67744.1| thymidylate kinase [Gemella haemolysans ATCC 10379]
          Length = 202

 Score =  160 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 12/211 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I FEG++G+GKTT I+LL+ + +R    VH TR+P      +      L  G+ 
Sbjct: 1   MKKGLLIVFEGLDGSGKTTQINLLEEWFKRNKKLVHSTRQPTDFYRNDKRVKDYLEDGIV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                + A++ AA R    E  I+P L +G  ++ DR+L SS A+   R          +
Sbjct: 61  P-NMYSIALLAAADRTYQNEVEIKPTLSKGINIISDRYLYSSLAFFKARGIKYQE----I 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + I+     PD  I LD+  D  L+RV+ R           FE K+     + R  FL++
Sbjct: 116 RNINKDIEEPDIIIFLDIDPDKALERVRVRDGKNL-----RFEEKNDNTFIQVRNNFLEV 170

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                 +  IVDS    + +   I+  + ++
Sbjct: 171 --LPKGKTLIVDSTKDVKLIHELIIKYIEKV 199


>gi|154285394|ref|XP_001543492.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
 gi|150407133|gb|EDN02674.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1]
          Length = 232

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  + L++ LQ + ++V   R P  T       +  L     +
Sbjct: 11  QRGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLINGYL-MQNAQ 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R +     I+  +  G  ++ DR+  S   Y   + +   L L+   
Sbjct: 70  LDDHSIHLLFSANRWEAAAE-IQRDISNGITVIIDRYSYSGAVYSAAK-NIPGLSLEWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
           +  +    PD  + L++  +   KR            ++ +E  +     + RQ+F ++ 
Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGMERYE--NDAFQTRIRQLFQELI 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           AR  P+  H+VD+  +   VA +++      +++
Sbjct: 178 AREDPNNIHVVDAGRAESEVALDVIRAARRAIEE 211


>gi|86158146|ref|YP_464931.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774657|gb|ABC81494.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 218

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCG 58
            G F+  EG++GAG TT   LL   L+      HVT EP G P     R VL       G
Sbjct: 14  RGRFVVVEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVGGGG 73

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +F   A A++FAA R DH    I P L  G  ++ DR+  SS AYQG         ++
Sbjct: 74  GADFDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----ME 129

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177
            ++ ++     PD T+ L +  ++ L+R       R +A LD    +      +    + 
Sbjct: 130 WVRTVNAAAGPPDATLFLRVRPEVALRR-------RRAASLDREIYEVGAFQRRVAAEYD 182

Query: 178 --LDIARNQPDRCHIVDSAHS 196
             + + R   +    +D    
Sbjct: 183 RAIALLRQAGESVVEIDGERP 203


>gi|15639345|ref|NP_218794.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025587|ref|YP_001933359.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14]
 gi|23821760|sp|O83373|KTHY_TREPA RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|3322633|gb|AAC65341.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189018162|gb|ACD70780.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14]
 gi|291059744|gb|ADD72479.1| thymidylate kinase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 208

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+ FEGI+G G +T +  L+R  Q +  D+  T+EP G       R VL         ++
Sbjct: 7   FVVFEGIDGTGTSTQLRALERHFQAR-KDMVFTQEPTGGEIGTLIRDVL--QKRVIMSSK 63

Query: 66  AEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  ++FAA R +H+E    I   L EGKI+LCDR++ SS  YQG   S          E+
Sbjct: 64  ALGLLFAADRHEHLEGAGGINDCLAEGKIVLCDRYVFSSLVYQGMAVSGSFA-----YEL 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +  +P+     D P+++ ++R+  R    E         +     EK R+ +  I R 
Sbjct: 119 NKEFPLPEVVFYFDAPIEVCVERITARGLQTELY-------EYTSFQEKARKGYETIFRK 171

Query: 184 ----QPDRCHI-VDSAHSFQSVATNILNIVWE 210
                P    I +D+    + V   IL+ + E
Sbjct: 172 CRHLYPAMKVIEIDAREEIEVVHERILHHLRE 203


>gi|119498863|ref|XP_001266189.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
 gi|119414353|gb|EAW24292.1| thymidylate kinase [Neosartorya fischeri NRRL 181]
          Length = 221

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 16/215 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G  I  EG++ AGK++    L+  LQ   + V   R P   TP  +     L   G  
Sbjct: 6   NRGALIVVEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + +   I   +  G  ++ DR+  S   Y   +  +++L L+  
Sbjct: 64  QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNRNLSLEWA 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD  + L +  +   KR            ++ +E + +    + R++F  +
Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAKR--------GGFGVERYENETM--QNRVRELFQTL 171

Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               Q D  H +D+  SF +V+ +I+ IV + +++
Sbjct: 172 FDLQQGDYVHTIDAGRSFDAVSQDIMKIVTDSIER 206


>gi|118351574|ref|XP_001009062.1| thymidylate kinase family protein [Tetrahymena thermophila]
 gi|89290829|gb|EAR88817.1| thymidylate kinase family protein [Tetrahymena thermophila SB210]
          Length = 211

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 22/223 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI FEG++  GKT+    L  FL+       + R P  T       +  L    + 
Sbjct: 3   KRGLFIVFEGLDRCGKTSQCENLVNFLKESGKKAIMKRYPDRTTTIGQTINNYLQGKQN- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A  ++F+A R +  E  I+  L EG  ++CDR+  S   Y   +       ++  +
Sbjct: 62  LSDQAIHLIFSANRWEQQEE-IKKILDEGTNIVCDRYCYSGAVYTSAKGYD----IEWCK 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD  + L  P ++  KR             + +E++     +K R+ F ++ 
Sbjct: 117 NPDKGLIKPDIVLYLHAPKEVISKR--------SGFGGEVYEKE--EFQQKVREAFDNLL 166

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + + D    +D++ + + V   I   +     K+V   +S KD
Sbjct: 167 QKE-DNVVFIDASGTKEEVFDLINQNI-----KKVFEDASTKD 203


>gi|15898046|ref|NP_342651.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2]
 gi|284175899|ref|ZP_06389868.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus 98/2]
 gi|14285510|sp|P58157|KTHY2_SULSO RecName: Full=Probable thymidylate kinase 2; AltName: Full=dTMP
           kinase 2
 gi|13814387|gb|AAK41441.1| Thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2]
 gi|261602758|gb|ACX92361.1| thymidylate kinase [Sulfolobus solfataricus 98/2]
          Length = 213

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 16/217 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+FEGI+G+GK++   LLK +++ +  DV++T         +  +        +  
Sbjct: 2   RGLLIAFEGIDGSGKSSQAVLLKDWIEMR-RDVYLTEWNSSEWIHDIIKEA---KKKNML 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +   +++ A    D  E  I P L  G +++CDR++ ++YA    RD  +++  D ++ 
Sbjct: 58  TSITFSLIHATDFSDRYERYILPMLKSGFVVICDRYVYTAYA----RDVVRNVDFDWVKR 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDY-----FERKDVMIHEKRRQ 175
           +    + P+ T  + +  +I L+R++   R    + A +D       E   +    +  +
Sbjct: 114 LYSFAIKPNFTFYIRVTPEIALERIRKAKRKIKPQEAGIDILGEIPLEEGFLKYQSRIVE 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           I+  IA+ + +    +D     + V  +I  I+ E +
Sbjct: 174 IYDKIAKEESN-FITIDGNRPLKDVQIDIRKILGEYI 209


>gi|8247943|sp|Q55593|KTHY_SYNY3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 212

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 13/215 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDE 61
           LFI  EGI+G+GKTT   LL    QR+     ++ EP   P     R  L   L    D 
Sbjct: 4   LFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYNDA 63

Query: 62  FGAEAEA-IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              EA+   +FAA R  H+    + +   L +   ++  R+  SS AY            
Sbjct: 64  RQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCH----TEADW 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + +Q ++     PD  I LDLPVD+ L+R+ +R  L + A  + +E+++ +I     + +
Sbjct: 120 EFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLI--SVHRNY 177

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             I  +   +   +D++   + +   I+  V E++
Sbjct: 178 DRIFAHYQGQLCRLDASLPVEQLHQAIITKVEEML 212


>gi|150399111|ref|YP_001322878.1| thymidylate kinase [Methanococcus vannielii SB]
 gi|166221757|sp|A6UP44|KTHY_METVS RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|150011814|gb|ABR54266.1| dTMP kinase [Methanococcus vannielii SB]
          Length = 198

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI FEGI+G+GKTT   +L   L  +      T EP         R VL      
Sbjct: 1   MNK--FIVFEGIDGSGKTTQAKMLAEKLNAE-----YTCEPTTGKIGRTIREVL---SGS 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   E  A++FAA R++HV   I   L +   ++ DR++ SS  YQ  +  S+    + +
Sbjct: 51  ECKKETLALLFAADRVEHVSE-IEKMLQK-SHVVTDRYVYSSIIYQTMQGISK----EFI 104

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I+    +PD  +ILD+  +  LKR+       E    + FE+  +   +K +Q +  I
Sbjct: 105 YSINFFAKIPDIVVILDVDTEEALKRM-------EFREKEIFEK--IEFQKKIKQEYHKI 155

Query: 181 ARN-----QPDR-CHIVDSA-HSFQSVATNILNIVWELV 212
           A       +P     +V++   + + V   + N + + +
Sbjct: 156 AELKCSKFEPTYGFVMVNTTGKTPEEVFNELFNKILDKI 194


>gi|172036089|ref|YP_001802590.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142]
 gi|171697543|gb|ACB50524.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142]
          Length = 208

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 20/214 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GVD 60
           LFI  EGI+ AGKTT    LKR+L  +     ++ EP      E  R  + S        
Sbjct: 4   LFIVLEGIDKAGKTTQAERLKRYLINQGDSAIISSEPTEGVIGELIRKAMQSPVFKINDK 63

Query: 61  EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +  A +FAA R  H+ N    V +    +   ++  R+  SS AY    +S+    
Sbjct: 64  AKFDQQMAYLFAADRHYHLYNEVDGVYKLIQQDHYHVIATRYYFSSLAY----NSNNQEE 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            + +  ++ +   PD  I LD+P+DI L R++N +        +          ++ +  
Sbjct: 120 FNFVYGLNKRFPNPDLVIYLDIPLDIALSRLENTHDKEVYETKEKL--------QQVQDN 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  I ++   +   +D  ++ + +   I+  + +
Sbjct: 172 YQQIFQSYKGQILTIDGKNNIEQIHQEIITYLEK 205


>gi|212535132|ref|XP_002147722.1| thymidylate kinase [Penicillium marneffei ATCC 18224]
 gi|210070121|gb|EEA24211.1| thymidylate kinase [Penicillium marneffei ATCC 18224]
          Length = 238

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 24/229 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  +  EG++ AGK++   LL + L   NY     R P   TP  +     L   G  
Sbjct: 11  KRGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYL--RGES 68

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + V   I+  + +G  ++ DR+  S   Y   +  + +L L   
Sbjct: 69  QLDDHSIHLLFSANRWE-VAQSIQKDIADGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWA 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V    PD  + L +  +   KR            ++ +E     + ++ R +FL +
Sbjct: 127 WQPEVGLPRPDLCLFLSISPEEAAKR--------GGYGVERYE--TDSMQKRVRDLFLSL 176

Query: 181 ARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220
                 D   ++D+  S   VA +IL  V E ++        K++ P +
Sbjct: 177 LDLPHNDEICVIDAGQSVDEVALDILEPVLECMKNVDSIGPLKKLGPWT 225


>gi|297619540|ref|YP_003707645.1| thymidylate kinase [Methanococcus voltae A3]
 gi|297378517|gb|ADI36672.1| thymidylate kinase [Methanococcus voltae A3]
          Length = 223

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 101/217 (46%), Gaps = 31/217 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G+GK+T   +L         +  +  EP  +   +  R  L     ++   E
Sbjct: 28  FIVFEGIDGSGKSTQAKMLADR-----INAILDYEPTNSEVGKLIRKGLSEGCFEK---E 79

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++FA  R++H + + +  L +  I+ CDR++ SS  YQ    ++Q + ++ +  I+ 
Sbjct: 80  TLALLFAGDRVEHCKELAK-KLEKNHIV-CDRYVYSSIVYQ----NTQGIDIEYIYNINR 133

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
              +PD  ++LDL  ++ + RV +R    E      FE+  +   +  R+ +L I  ++ 
Sbjct: 134 YARVPDIVVLLDLNPELSMLRVNDRTGNNEI-----FEK--IEFQKIIREKYLQIFEDEK 186

Query: 186 DR----------CHIVDSAHSFQSVATNILNIVWELV 212
           ++             +D+  S   +   I +++ + +
Sbjct: 187 NKNKKSMFKPPIYIKIDANKSILELHNEIYDLIKQHI 223


>gi|152990566|ref|YP_001356288.1| thymidylate kinase [Nitratiruptor sp. SB155-2]
 gi|151422427|dbj|BAF69931.1| thymidylate kinase [Nitratiruptor sp. SB155-2]
          Length = 191

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 15/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I  EGI+ AGK+T I  LK        D   T+EPG TP     R ++L        +
Sbjct: 1   MYILIEGIDRAGKSTQIEKLKTLFP----DALFTKEPGCTPLGNKIRDMVLHTQNP--SS 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI P L   K ++ DR   S  AY   +       L +L  I+
Sbjct: 55  LAELFLFLADRAEHIEKVILPNLK--KTIISDRGYISGIAYAAIKTELDLPTLRNLNAIA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++ V PD  + L+L  +   KR+       ++  LD  E++ +    + + I   + +++
Sbjct: 113 MKNVYPDKIVFLELSENELRKRM-------DALPLDSIEQRGIEYLMQVQSIMKKVIQSE 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
           P    I+D++   + +   IL  + E
Sbjct: 166 PIPSLILDASLDEEVIFQTILTFIKE 191


>gi|224055681|ref|XP_002298600.1| predicted protein [Populus trichocarpa]
 gi|222845858|gb|EEE83405.1| predicted protein [Populus trichocarpa]
          Length = 222

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 89/221 (40%), Gaps = 21/221 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I  EG++ +GKT+  S L  +L+   +   + R P  + +        LS     
Sbjct: 16  SRGALIVLEGLDRSGKTSQSSRLLSYLEGLGHSTELWRFPDRSTSVGQMISAYLSNK-SH 74

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  +
Sbjct: 75  LDDRTIHLLFSANRWE-KRSLMETQLKNGTTLVVDRYSYSGVAFSSAKG----LDIEWCK 129

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V  + PD  + LD+P +   +R             + +E+  +   +K  + +  + 
Sbjct: 130 APEVGLLAPDIVLYLDIPPEKAAER--------GGYGGERYEQ--LEFQKKVAKCYQALC 179

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLS 220
            +      ++D+    + +   + + V + V   +R  PLS
Sbjct: 180 DSS---WKVIDACQPIEDIEKQLQDAVLDHVMACERGRPLS 217


>gi|332181321|gb|AEE17009.1| Thymidylate kinase [Treponema brennaborense DSM 12168]
          Length = 208

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+G+G +T I+LLK  L         T EP         R +L   G +     
Sbjct: 6   FIVFEGIDGSGTSTQIALLKNKLPNPG--TLFTAEPTSLATGRFLRTLL--RGDERLTPG 61

Query: 66  AEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A +FAA R +HV   + I     +G I++ DR+  SS AYQ             L E 
Sbjct: 62  TMAYLFAADRYEHVHAQDGILQTCADGGIVVSDRYFFSSLAYQSAECG--RELPAKLNE- 118

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                +P+     D+   + L R+  R         ++ E+     +E+    +   A  
Sbjct: 119 --SFPLPEYLFYFDIEPSVSLNRITGRSVTEIYEKREFLEKTAAE-YERIIGEYEKTAVG 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
              +   +D++ S   V+ NI +I+ 
Sbjct: 176 TGMKITRLDASESVAEVSENIWSILR 201


>gi|294950385|ref|XP_002786603.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239900895|gb|EER18399.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 233

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 20/218 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G FI  EG++ +GK+T +  +   L+++   +V     P  + A        L    
Sbjct: 1   MARGAFIVLEGLDRSGKSTQLRRISEALRQRTGKEVVEMGFPRRSSAIGKMLDTYLRDSS 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +   EA  ++F+A R + +  ++   L  G+ ++CDR++ S  AY   + +      + 
Sbjct: 61  SKMRDEAVHLLFSANRWEAMSEMLSH-LAAGRHIVCDRYIFSGVAYTAMKGTVDF---EW 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            + + V    PD  + LDL  +   KR         +   + +E++D+    K R ++  
Sbjct: 117 CKSVDVGLPKPDLVVFLDLSPEAAAKR--------GAYGEERYEKEDL--QMKVRTMYTK 166

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILN---IVWELVQK 214
               +P    I D+    + V   + +    V + ++K
Sbjct: 167 F-EKEPF-WRIFDADRPAEEVTRTVTDAAVAVAQALEK 202


>gi|146303757|ref|YP_001191073.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula
           DSM 5348]
 gi|145702007|gb|ABP95149.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula
           DSM 5348]
          Length = 213

 Score =  157 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 17/217 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+FEGI+G+GK++   LLK +L  +  D ++T         E  +        +  
Sbjct: 2   GGSIIAFEGIDGSGKSSQAKLLKDWLDSR-VDAYLTEWNSSDWIHEVIKEA---KKKNLL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                +++ A    D  E +I P    G +++ DR+  ++YA    RDS + + L+ +++
Sbjct: 58  TPLTFSLIHATDFADRYERLILPMYRTGFVVVSDRYYYTAYA----RDSVRGVSLEWVKK 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDYF-ERKDVMIHEKRR----Q 175
           +      PD T  + +  ++ L R++   R    + A  D F + +      K +    +
Sbjct: 114 LYSYAPKPDITFFIRVTPEVALSRLKESKRGIKPQEAGADVFPDLEPEEGFLKYQGMILE 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           I+  +A  +     ++D   S + +  +I   V EL+
Sbjct: 174 IYDKLAEEEG--FVVLDGNRSPREIQMDIRRRVGELL 208


>gi|259480991|tpe|CBF74121.1| TPA: thymidylate and uridylate kinase (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 223

 Score =  157 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 26/231 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ AGK++    L   LQ     V   R P   TP  +     L   G   
Sbjct: 10  RGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPDRTTPIGKLIDGYL--RGQSH 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V   I   +  G  ++ DR+  S   Y   + ++  L L+   
Sbjct: 68  LDDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEWAW 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---- 177
           +  V    PD  + L +  +   KR             + +E +   +  + R++F    
Sbjct: 126 QPEVGLPKPDLCLFLSISPEEAAKR--------GGFGGERYENE--AMQTRVRELFNTIF 175

Query: 178 -LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLSSKKDI 225
            L  A +      I+D+  S   V+ +ILN+V E +      SPL     I
Sbjct: 176 DLQRATD----IRIIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 222


>gi|164658566|ref|XP_001730408.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
 gi|159104304|gb|EDP43194.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966]
          Length = 520

 Score =  157 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 24/214 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G+FI  EG++ +GK+T +  L + L        + + P   TP        L +    +
Sbjct: 310 RGVFIVVEGLDRSGKSTQVDRLVQTL---GPRARLVKFPERTTPIGSMIHSYLKNQ--TD 364

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +   ++F+A R + + ++++ +L +G+ ++CDR++ S  AY   +     L L    
Sbjct: 365 ACDQTVHLLFSANRWELLSSIVQ-SLRDGQHVICDRYIFSGMAYTHAKG----LDLAWCT 419

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---L 178
              V   +PD T+ LDL      KR             + +ER+        R  F    
Sbjct: 420 APDVGLPVPDLTLFLDLDESTATKRAA--------YGEERYERR--AFQRLVRHAFENVE 469

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +      R   +D++ +   V   +   V E+V
Sbjct: 470 QLMLRSGARWERLDASGTLDDVWQAVHAQVQEVV 503


>gi|124516694|gb|EAY58202.1| Thymidylate kinase [Leptospirillum rubarum]
          Length = 217

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 17/220 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EGI+G+GK+T I LL+ +L+ K + V           +   +            
Sbjct: 8   GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKA---KKKQLLT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ AA       + I PAL  GKI+L DR++ ++ A    RD+++ +  D L   
Sbjct: 65  PYGFSLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRDWLVNN 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFE-----RKD-VMIHEKRRQI 176
               + PD T    +   +   R+   R      A LD  E     R+  ++   +  + 
Sbjct: 121 FRFAIRPDLTFFFRMDPALAYDRITQVRDIKYYEAGLD-MELSMNPRESYILFQSRVLEG 179

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           + ++A+       ++D A   +     +  +V  L+Q  +
Sbjct: 180 YENLAKEHG--FSVLDGAKPVEETQRVVRRLVNPLIQSLL 217


>gi|15921837|ref|NP_377506.1| thymidylate kinase [Sulfolobus tokodaii str. 7]
 gi|23821798|sp|Q970Q8|KTHY2_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|15622624|dbj|BAB66615.1| 213aa long hypothetical thymidylate kinase [Sulfolobus tokodaii
           str. 7]
          Length = 213

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 17/219 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ I+FEGI+G+GK++  +LLK +++ K  DV++T         +  +        D
Sbjct: 1   MKKGVLIAFEGIDGSGKSSQATLLKDWIELK-RDVYLTEWNSSDWIHDIIKEA---KKKD 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  +++ A    D  E  I P L  G I++ DR++ ++YA    RDS + + +D +
Sbjct: 57  LLTPLTFSLIHATDFSDRYERYILPMLKSGFIVISDRYIYTAYA----RDSVRGVDIDWV 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYF-----ERKDVMIHEKR 173
           +++    + PD T  + +  DI L+R++        + A  D F     E   +      
Sbjct: 113 KKLYSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGLI 172

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +++  + ++  +   ++D   + + +   I   V EL+
Sbjct: 173 TEVYDKLVKD--ENFIVIDGTKTPKEIQIQIRKFVGELI 209


>gi|315187239|gb|EFU20996.1| thymidylate kinase [Spirochaeta thermophila DSM 6578]
          Length = 215

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 17/212 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F+ FEGI+GAG TT +  +   L+ + + +  TREP   P     R  L S       A
Sbjct: 15  RFVVFEGIDGAGTTTQLRKVASSLKGRGHPLWETREPTDGPVGVFIRECLASG--LSLPA 72

Query: 65  EAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A +FAA R  HV  E+ +   +  G+I+LCDR+L SS AYQ + D ++ L    +++
Sbjct: 73  SVYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQSDSDHTREL----VED 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH--EKRRQIFLDI 180
           ++ +  +P+  I LD PV+  L+R+ +R         D FE+++V+++   + R++ L  
Sbjct: 129 LNHRFPLPEVVIYLDTPVEECLRRLSSRPQK------DLFEQREVLMNVVSRYREV-LRA 181

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +  +   VD       ++  IL  +  ++
Sbjct: 182 YEAEGGKVLYVDGTQPPDLISREILKFLEGIL 213


>gi|206603546|gb|EDZ40026.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG']
          Length = 217

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 17/220 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EGI+G+GK+T I LL+ +L+ K + V           +   +            
Sbjct: 8   GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKA---KKKQLLT 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ AA       + I PAL  GKI+L DR++ ++ A    RD+++ +  D L   
Sbjct: 65  PYGFSLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRDWLVNN 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFE-----RKD-VMIHEKRRQI 176
               + PD T    +   +   R+   R      A LD  E     R+  ++   +  + 
Sbjct: 121 FRFAIRPDLTFFFRMDPALAYDRITQVRDIKYYEAGLD-MELSMNPRESYILFQSRVLEG 179

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +  +A+       ++D A   +     +  +V  L+Q  +
Sbjct: 180 YESLAKEHG--FSVLDGAKPVEETQRVVRRLVNPLIQSLL 217


>gi|302896090|ref|XP_003046925.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256727853|gb|EEU41212.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 257

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 34/232 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G FI  EG++ +GKTT + LL++    +   V V R P   TP  +     L S    E
Sbjct: 34  RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGNKVKVMRFPDRSTPIGQMIDSYLKS--DVE 91

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V+  I+  L  G  ++CDR+  S   Y   + +   L L   +
Sbjct: 92  MDDHVIHLLFSANRWEAVKQ-IQSLLAAGTTIVCDRYYHSGIVYSAAKQN-PSLTLPWAR 149

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  + LDL  +    R             + +ER    +  + R++F  ++
Sbjct: 150 APERGLPRPDLVLFLDLTEEQARSR--------GGWGGEVYER--SEMQRRVRELFWGLS 199

Query: 182 -------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                              + + +   +VD+  S + VA  +   V   V++
Sbjct: 200 MGGRDVTAQGLGLDEGEGWKQEEEDLVVVDAGGSVEEVAEEVWRKVKGRVEQ 251


>gi|307718813|ref|YP_003874345.1| thymidylate kinase [Spirochaeta thermophila DSM 6192]
 gi|306532537|gb|ADN02071.1| thymidylate kinase [Spirochaeta thermophila DSM 6192]
          Length = 242

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 19/213 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F+ FEGI+GAG TT +  +   L+ + + +  TREP   P     R  L S     F A
Sbjct: 42  RFVVFEGIDGAGTTTQLGKVASSLKGRGHTLWETREPTDGPVGTFIRECLASG--LSFPA 99

Query: 65  EAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A +FAA R  HV  E+ +   +  G+I+LCDR+L SS AYQ    S      + +++
Sbjct: 100 SVYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQ----SDSAHTRELVED 155

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++ +  +P+  I LD PV+  L+R+ +R         D FE+++V++       + ++ R
Sbjct: 156 LNRRFPLPEVVIYLDTPVEECLRRLSSRPRK------DLFEQREVLM--NVASRYREVLR 207

Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               +  +   VD       +   IL  +   +
Sbjct: 208 TYEAEGGKVLYVDGTQPPDLIFREILKFLERTL 240


>gi|290967771|ref|ZP_06559324.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L]
 gi|290782130|gb|EFD94705.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L]
          Length = 232

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 18/225 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58
            G  I  EG +G+GK T   LL R L R+   V+    P     +     + L       
Sbjct: 2   KGKLIVIEGGDGSGKATQADLLYRRLNREGKPVYKVTFPDYDSPSSMLVKMYLQGQFGKQ 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHL 115
            D     A +  +A  R    +   +  L +G I++ DR+  S+  YQ  + S   ++  
Sbjct: 62  ADSVNPYAASTFYAVDRFASYQMKWKTLLAQGYIIIADRYTTSNMLYQMIKISAPAARQT 121

Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +LD L +     +   +PD  I+LD+P+ +    +  R         D  E+ +    ++
Sbjct: 122 YLDWLWDFEFIKMGLPIPDIVILLDVPLAVTETLMAARQGKTGGETGDIHEK-NRAFLQQ 180

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
               + ++A         V         S QS+   +  +V   +
Sbjct: 181 CHAAYEELAHMYG--WRRVACTTQGKMRSPQSIQEEVYTVVATAL 223


>gi|223040987|ref|ZP_03611247.1| thymidylate kinase [Campylobacter rectus RM3267]
 gi|222877743|gb|EEF12864.1| thymidylate kinase [Campylobacter rectus RM3267]
          Length = 192

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 14/206 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+GAGK+T I+ L     +      VT+EPGGT   E  R +LL    ++   
Sbjct: 1   MYILFEGIDGAGKSTQIARLATAYPQ----AIVTKEPGGTKLGENLREILL--KENDLDK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H   +I+P     K++L DR   S  AY     +     L SL + +
Sbjct: 55  RAEILLFLADRAEHSGKIIKP--NSDKMILSDRGFVSGMAYALAGGNFSFEELLSLNKFA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +Q   P   +           R+ +R      A +D  E +      + +    +I +  
Sbjct: 113 LQGNFPQKIVFFKADESTLRSRLSSR------AQMDGIEARGFEYLLRVQDAMEEILQKL 166

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
                 +D+A   + +   I   + +
Sbjct: 167 DVSYVTIDAALDEEKITNLIKEFIND 192


>gi|325971230|ref|YP_004247421.1| thymidylate kinase [Spirochaeta sp. Buddy]
 gi|324026468|gb|ADY13227.1| Thymidylate kinase [Spirochaeta sp. Buddy]
          Length = 203

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 20/208 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEG++GAG TT + LL     R +     T EP   P     R VL           
Sbjct: 8   FIVFEGLDGAGTTTQMQLLAEACDRADTPCRATFEPTDKPIGRLVRSVL--QKQILTTPL 65

Query: 66  AEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           A A+++AA R DH+ N    I   L  GK+++ DR+L SS +YQG         + SL E
Sbjct: 66  ALAMLYAADREDHLNNPVYGIIHDLEAGKLVISDRYLYSSLSYQGV--ECDFEKIASLNE 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-A 181
                  P     +D PVD  L+R+ +R +  E      FE+K      K ++ +  I +
Sbjct: 124 F----PSPQYVFFIDTPVDECLRRINSRGNEVEL-----FEKK--EFLHKVKENYERIFS 172

Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIV 208
              P      +D     + +A+ I  I+
Sbjct: 173 SLDPQVTLVRLDGLLKIEEIASQIQQIL 200


>gi|195150817|ref|XP_002016347.1| GL10538 [Drosophila persimilis]
 gi|194110194|gb|EDW32237.1| GL10538 [Drosophila persimilis]
          Length = 211

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 83/215 (38%), Gaps = 17/215 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G    FEG +  GKTT   LL  FL+ K         P    +     +  L+   D 
Sbjct: 5   KRGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNSND- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +++ N IR  L+ G  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAYTAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L    D  L R             + +E+  +   +K  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLKTASDNLLSR--------GKYGEERYEK--LEFQQKVAEVFNRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +    H +D+  S   + T I + + E +Q++V
Sbjct: 169 EQESSYWHQIDANQSVAEIHTQI-SGIAEKLQQQV 202


>gi|251771465|gb|EES52042.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum]
          Length = 220

 Score =  155 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 17/217 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EGI+G+GK+T + LL  +LQ K + V  +        +   R            
Sbjct: 11  GRLIVVEGIDGSGKSTQLDLLSDYLQSKGFGVLKSAWNSSPDISPIIRKA---KKKQVLT 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A +++ AA         I PA+  G I+L DR++ ++ A    R   +   L +    
Sbjct: 68  PYAFSLLHAADFSFRYTYEILPAMEAGMIVLSDRYIYTAIARDCARGLPRPWLLSNFN-- 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFE-----RKD-VMIHEKRRQI 176
               ++PD T +  +  +   +R+ + R      A LD  E     R+  ++   +    
Sbjct: 126 --FAIVPDLTFLFRVDPETSYQRITRTRSIKFYEAGLD-MELSTDPRESYILFQSRVLAE 182

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + ++   +    H+VD+  S +   T +  ++  +++
Sbjct: 183 YDNL--RETHGFHVVDATLSLEKTQTRMRRLLSPIIR 217


>gi|255955699|ref|XP_002568602.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590313|emb|CAP96490.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 223

 Score =  155 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 24/228 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ AGK++   +L+  L R+ + V   R P   TP  +     L      
Sbjct: 10  RRGALIVVEGLDRAGKSSQCEMLRDSLSRQGHVVKYIRFPDRTTPIGKLIDSYLRGSSHQ 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                +  ++F+A R + +   I   +  G  ++ DR+  S   Y   + ++  L L+  
Sbjct: 70  --DDHSIHLLFSANRWE-IAKSIEEDIANGTTVIVDRYSYSGVVYSAAK-ANPTLSLEWA 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +    PD  + L +  +   KR             + +E  +  +  + R++F  I
Sbjct: 126 WRPEIGLPRPDICLFLSISPEEAAKR--------GGFGAERYE--NGEMQTRVRELFQTI 175

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220
              Q D   I+D+  S + V+  I  +V + +         +++ PL+
Sbjct: 176 FEKQQD-VSIIDAGKSIEEVSQEIRGVVADCIARLDVAGALRKLGPLA 222


>gi|125808374|ref|XP_001360729.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
 gi|54635901|gb|EAL25304.1| GA19108 [Drosophila pseudoobscura pseudoobscura]
          Length = 211

 Score =  155 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 17/215 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G    FEG +  GKTT   LL  FL+ K         P    +     +  L+   D 
Sbjct: 5   KRGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNSND- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +++ N IR  L+ G  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAYTAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L    D  L R             + +E+  +   +K  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLKTASDNLLSR--------GKYGEERYEK--LEFQQKVAEVFNRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             +    H +D+      + T I + + E +Q++V
Sbjct: 169 EQESSYWHQIDANQPVAEIHTQI-SGIAEKLQQQV 202


>gi|195487624|ref|XP_002091984.1| GE13938 [Drosophila yakuba]
 gi|194178085|gb|EDW91696.1| GE13938 [Drosophila yakuba]
          Length = 211

 Score =  155 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 16/211 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPALPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LKDEVIHLMFSANRWEHM-NQMKQKLLEGHTLVVDRYSFSGVAYSSAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  + 
Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTNRGQYGEERYEK--VEFQSRVAKVFDRLC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            N+    H  D++     +   I +I  EL+
Sbjct: 169 ANEASYWHQFDASQPVDELHARIASITEELL 199


>gi|219121041|ref|XP_002185752.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582601|gb|ACI65222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 245

 Score =  155 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 15/218 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G F+  EG++  GKTT   LL + L          R P  T A        L    +
Sbjct: 8   ISRGAFVVLEGVDRCGKTTQSGLLLKRLLAAGIAACSMRFPDRTTATGKIIDQYLQSSQN 67

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFL 117
                A  ++F+A R +   + +   L  G  +LCDR+  S  A+      +  +  L L
Sbjct: 68  -LDDRAIHLLFSANRWES-ADALTAHLQAGTTVLCDRYAYSGVAFSASKIDKKGNSLLSL 125

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D  Q        PDC I LDL      +R             + +E+K++ I  + R   
Sbjct: 126 DWCQAPDQGLPAPDCVIFLDLSQAEAEQR--------GGYGGERYEKKEMQIRVRHRFGD 177

Query: 178 LDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQ 213
           L+       R     +D+A S + V  +I   V E +Q
Sbjct: 178 LEAIDKASGRVAWKFIDAAQSVEQVENDIWKAVEETIQ 215


>gi|302349154|ref|YP_003816792.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15]
 gi|302329566|gb|ADL19761.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15]
          Length = 214

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 21/195 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  ++ EGI+G+G TTH  LL + L    Y    T+EP   P  +  R +L     +  
Sbjct: 2   KGAIVALEGIDGSGITTHSKLLAQRLSSMGYRAIYTKEPTEGPVGQVIRQLLAQGRPE-- 59

Query: 63  GAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                A++FAA R  H      +   +  AL +G +++ DR+  SS AYQG   +     
Sbjct: 60  -PRLAALLFAADRSWHLCCDPSLPGGVMGALEQGYVVVMDRYKYSSIAYQGASGADPG-- 116

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              L E++      D  I +D+PV++ L RV  R           +E +      + ++ 
Sbjct: 117 --WLWEVNSFAPEADLLIFIDVPVEVALSRVAERQRREG------YEVEG--FLRRAKER 166

Query: 177 FLDIARNQPDRCHIV 191
           F ++      R   V
Sbjct: 167 FYEVLAQAEARGVTV 181


>gi|222100442|ref|YP_002535010.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359]
 gi|221572832|gb|ACM23644.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359]
          Length = 143

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 12/149 (8%)

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE ++F A+R   VE+ I+  L  G  ++ DR++DSS AYQG         ++ L 
Sbjct: 1   MTPKAELLLFLASRNLLVED-IKHYLFRGYFVVLDRYVDSSVAYQGFGRGLGKEVVEKLN 59

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +   ++PD T  +D+ V+  L+R            L+ FE++     E+ R+ +L +A
Sbjct: 60  AFATDGLIPDVTFYIDIDVETALRR---------KGELNRFEKR--EFLERVRKGYLLLA 108

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P+R  I+D   + + +   ++  +  
Sbjct: 109 EEHPERIVILDGNRTVEEIHRMVVEEIER 137


>gi|116623132|ref|YP_825288.1| thymidylate kinase/thymidylate synthase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116226294|gb|ABJ85003.1| thymidylate kinase / thymidylate synthase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 259

 Score =  155 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 15/219 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I+FEG +G+GKTT   L K +L+ + ++V  T+           +          
Sbjct: 27  RRGLLIAFEGPDGSGKTTQRKLFKNWLKSEGHEVVTTKWNSSALIKPLVKA---RKAARS 83

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E  +++ AA     +E  I PAL +G++++ DR+L ++ A    RD+++ + L  L 
Sbjct: 84  LSPEEFSLLHAADFRYRLETEILPALWQGQVVVADRYLFTALA----RDAARGMDLHWLL 139

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFE-----RKDVMIHEKRRQ 175
           E+      PD      +  +   KR+   R      A  D  E     +       +  Q
Sbjct: 140 EVYRPLFWPDLVFYFSVSPETSGKRIAAERAPNFYEAGQDVTEIADPFQSYAHFIGRVIQ 199

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +  +A+    R   VD+  S       I  +  E V++
Sbjct: 200 EYEALAKVF--RFVTVDAEQSIFDQHRQIRELFAEGVRR 236


>gi|115377200|ref|ZP_01464412.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|310821205|ref|YP_003953563.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|115365783|gb|EAU64806.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|309394277|gb|ADO71736.1| Thymidylate kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 220

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 19/220 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSC 57
            G FI  EG++GAG TT    L   L+ + + V  TREP   P     R      ++L  
Sbjct: 10  RGRFIVLEGLDGAGTTTQAERLAAALRAEGHAVLTTREPSDGPIGTMIRQALTGRLVLPQ 69

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G      E  A+++AA R DH++  + PAL  G I+L DR++ SS AYQG       L +
Sbjct: 70  GAGPLAPETLALLYAADRTDHLKAKVLPALEAGHIVLSDRYVLSSLAYQGAA-----LAM 124

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             ++ ++   V PD T+ + +   +  +R   R + +E    D           +  + +
Sbjct: 125 AWVEAVNGHAVSPDLTLFVHVSPAVAARRRAARGAAKELFEEDTL-------QRRIARQY 177

Query: 178 LD--IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +    R   +    +D   + ++V    L  +  ++ ++
Sbjct: 178 EEAIRRRESQETIVRIDGEQAVEAVTEAALVEIHSVLGRK 217


>gi|241613926|ref|XP_002407467.1| thymidylate kinase, putative [Ixodes scapularis]
 gi|215502816|gb|EEC12310.1| thymidylate kinase, putative [Ixodes scapularis]
          Length = 214

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 21/227 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  GLF+ FEG +  GKTT I LL   L +  +       P  +          L    D
Sbjct: 4   IQRGLFVVFEGCDRTGKTTQIKLLSESLSKLGHKTETVAFPNRSTTTGTLLDSYLKASTD 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F+A R +   +++   L     ++ DR+  S  A+   +     L     
Sbjct: 64  -LDDHAVHLLFSANRWEAAPSLLS-TLARNTTVIADRYAYSGVAFSAAKS----LDFRWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q+  V    PD  + + +P +    R             + +E  +    EK R  +  +
Sbjct: 118 QQCDVGLPEPDLVLYMSVPPETLAAR--------GGFGEERYE--NSSFQEKVRANYNHL 167

Query: 181 A--RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR---VSPLSSK 222
           A    +  R   VD + S Q V   I ++V E + K    V  L S+
Sbjct: 168 ASLEAKGGRWIEVDCSKSVQEVHHIIESVVLEALTKERADVGKLWSE 214


>gi|71018245|ref|XP_759353.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
 gi|46099078|gb|EAK84311.1| hypothetical protein UM03206.1 [Ustilago maydis 521]
          Length = 1208

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 24/213 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG++ AGK+T +  L   LQ K       + P  T A     +  L+    +
Sbjct: 424 KRGFFIVVEGLDRAGKSTQVERLAAHLQAK-----AVKFPERTTAIGQMINSYLAQ-TSD 477

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A  ++F+A R + V ++    L  G+ ++CDR+  S  AY   +  S     D  +
Sbjct: 478 LDDQAIHLLFSANRWECVASL-HRTLEAGESIVCDRYAFSGIAYSVAKGLSY----DWCR 532

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V   +PD T+ LDL          N  + R     + +E+  +    K R+ F  ++
Sbjct: 533 NPDVGLPLPDLTLFLDLD--------ANAAAARGGYGEERYEK--LDFQAKVREAFTRVS 582

Query: 182 RN---QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++      R   +D++ +   V  ++   V  +
Sbjct: 583 QDVRTHGGRWVTIDASKTLDQVTDDMQKAVHRV 615


>gi|119183198|ref|XP_001242660.1| hypothetical protein CIMG_06556 [Coccidioides immitis RS]
          Length = 228

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 14/220 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ AGK+T  ++L   L+ K ++    R P  T +        L  G  
Sbjct: 14  MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYL-RGET 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A  ++F+A R + + + IR  +  G  ++ DR+  S   Y   + +++ L L+  
Sbjct: 73  QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAK-NNRELSLEWA 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD    L++  +    R            L+ +E  +V +  +  ++F  +
Sbjct: 131 WQPEIGLPRPDLWFFLNISPEEAESR--------GGYGLERYE--NVTLQLRVGELFKSM 180

Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
              +  +   I+D+  S + VA +I   V   V     PL
Sbjct: 181 QGMENNEEMRIIDANQSKEQVARDISAQVLSAVDSIEGPL 220


>gi|45658645|ref|YP_002731.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|294827736|ref|NP_710987.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601]
 gi|59798325|sp|Q72NL9|KTHY_LEPIC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920823|sp|Q8F7Y6|KTHY_LEPIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|45601889|gb|AAS71368.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|293385579|gb|AAN48005.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601]
          Length = 204

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 16/217 (7%)

Query: 1   MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M +    F+ FEGI+G+GK+T    L   L           EP      +  R  L   G
Sbjct: 1   MKNKKPIFVVFEGIDGSGKSTLCKSLTEKLIELGIPSAAFTEPTNLETGKYLRKFL--RG 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             E G E +   F   R + ++  I PAL   K +L DR++ S+ AYQ   D S  + L 
Sbjct: 59  EIELGKEEQIEAFLNDREESLKQNILPALNSDKNVLLDRYMYSTAAYQSGDDLSPEMILK 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             + ++    +PD    LDL   I L+R+  R   +E      FE   +   EK R  + 
Sbjct: 119 --KNLNRNFKIPDLLFYLDLSPSIALERLNRRKEGKE-----RFE--TLAQLEKIRSAYE 169

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            I    P     +D   +   +    L I    ++ +
Sbjct: 170 KIL---PKDTIRIDGNKNQNQIVQECLEIFLTNIKSK 203


>gi|40215537|gb|AAL48064.2| RE69454p [Drosophila melanogaster]
          Length = 225

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 19  KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 77

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 78  LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 133 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFNRIC 182

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I +I  EL+ K
Sbjct: 183 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 215


>gi|116805978|emb|CAL26368.1| CG5757 [Drosophila simulans]
          Length = 211

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLRAP--------SNDLTNRGQYGEERYEK--VEFQSRVAEVFDRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I +I  EL+ K
Sbjct: 169 SKEASYFHKFDATQSVEDLHAQIGSITEELLPK 201


>gi|258645659|ref|ZP_05733128.1| dTMP kinase [Dialister invisus DSM 15470]
 gi|260403025|gb|EEW96572.1| dTMP kinase [Dialister invisus DSM 15470]
          Length = 222

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 21/227 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           MN G  I  EGI+G+GK T   LL+  L ++  DV     P     + A   + L+    
Sbjct: 1   MN-GKLIVLEGIDGSGKATQSGLLEDHLIKRGKDVMHISFPDYGSPSSALVKMYLNGDFG 59

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113
               +    A ++++A  R        +     G +++ DR+  S+  +Q  +   +  +
Sbjct: 60  RAPGDVNPYAASMLYAVDRFASFRMKWKSFYENGGVVIADRYTTSNMVHQMTKYDDEGKR 119

Query: 114 HLFLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL  L  +    ++   PD  I+LD+P  +  K V+ R   ++   +D  E+      
Sbjct: 120 KEFLSWLDHMEYEELELPRPDVVILLDVPPAVSKKLVRER--AKQGGSMDIHEQHS-AYL 176

Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212
           EK    +  +          +    D    S   ++  +L+ V   +
Sbjct: 177 EKCCDAYQVLCETYD--WLRISCMADGRLRSTDDISKEVLDAVLSRL 221


>gi|307150937|ref|YP_003886321.1| thymidylate kinase [Cyanothece sp. PCC 7822]
 gi|306981165|gb|ADN13046.1| thymidylate kinase [Cyanothece sp. PCC 7822]
          Length = 207

 Score =  154 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 24/224 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           MN  LFI  EGI+G+G +T  +LLK +  +K     ++ EP      +  R  +      
Sbjct: 1   MNK-LFIVLEGIDGSGTSTQATLLKDYFIQKGDKAVISPEPTNGVIGKMIREAMQKPIIL 59

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
               +   +  A +FAA R  H+ N    +   + +G  L+  R+  SS AY       +
Sbjct: 60  MEDKQSFDQQMAYLFAADRHYHLYNDLDGVFKLIQDGSHLITTRYYFSSLAYNCHT-PEE 118

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             F+  L E   +   PD  I +D+PV++ L+R+Q R        +D +E  + +I    
Sbjct: 119 FKFVRQLNE---RFPNPDLVIYIDIPVEVSLERLQERT------IIDVYENSEKLIQ--V 167

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           R  + +I          VD       V   I+    E ++K+ +
Sbjct: 168 RNNYQNIFETYEGLLLKVDGTAEINQVHDKII----EFLEKQFT 207


>gi|313622095|gb|EFR92678.1| thymidylate kinase [Listeria innocua FSL J1-023]
          Length = 136

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
           AR  HV   IRPAL  GK +LCDRF+DSS AYQG         +  +   ++++ +PD T
Sbjct: 1   ARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQVNLYAIEDTIPDRT 60

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             LD+P ++GL R+       +   ++  +++D+  HEK +  +  I +  PDR   VD+
Sbjct: 61  YYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQNGYEKIIQMFPDRFMRVDA 116

Query: 194 AHSFQSVATNILNIVWELV 212
             + + +   IL  + + +
Sbjct: 117 TKTPEEITDIILADILKQL 135


>gi|194880945|ref|XP_001974613.1| GG20995 [Drosophila erecta]
 gi|190657800|gb|EDV55013.1| GG20995 [Drosophila erecta]
          Length = 211

 Score =  154 bits (390), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 19/217 (8%)

Query: 1   MNSGL---FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           MN+G     I FEG + +GK+T   LL   L  K         P  +       +  L+ 
Sbjct: 1   MNAGKRGALIIFEGCDRSGKSTQSQLLVALLNSKGIPALPMNFPERSSIIGQVINSYLTN 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             D    E   ++F+  R +H+ N I+  L EG+ ++ DR+  S  AY   +     L  
Sbjct: 61  SKD-LPDEVIHLMFSTNRWEHM-NYIKQNLHEGRTVVVDRYSFSGVAYSAAKG----LDF 114

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D         + PD    L  P      R Q           + +E+  V    +  ++F
Sbjct: 115 DWCYAPERGLIKPDAVFYLRAPPADLTNRTQ--------YGEERYEK--VEFQGRVAKVF 164

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             I   Q    H  D+    + +   I +I  EL+ K
Sbjct: 165 DRICSEQGSYWHQFDATKPVEDLHAQIASITEELLPK 201


>gi|116805956|emb|CAL26357.1| CG5757 [Drosophila melanogaster]
 gi|116805970|emb|CAL26364.1| CG5757 [Drosophila melanogaster]
 gi|223967375|emb|CAR93418.1| CG5757-PA [Drosophila melanogaster]
 gi|223967383|emb|CAR93422.1| CG5757-PA [Drosophila melanogaster]
          Length = 211

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFDRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I NI  EL+ K
Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIANITEELLPK 201


>gi|329122084|ref|ZP_08250692.1| thymidylate kinase [Dialister micraerophilus DSM 19965]
 gi|327466891|gb|EGF12407.1| thymidylate kinase [Dialister micraerophilus DSM 19965]
          Length = 224

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 86/225 (38%), Gaps = 20/225 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
            G  I  EGI+G+GK T   LL   L++ N  V     P     + +   + L+      
Sbjct: 2   GGKLIVLEGIDGSGKATQSELLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
            ++    A ++ +A  R    +   +    +G I++ DR+  S+  +Q  +   +  +  
Sbjct: 62  PEDVNPYAASMFYAVDRFASYKMKWKKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121

Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FL  L+E     +    PD  I+LD+P++I  K V+ R        +D  E+  +    K
Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKERALS--GGNMDIHEK-HLDYLHK 178

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
               +  + +        +           + +A  I   V   +
Sbjct: 179 CYDSYQWLCKRY--NWEKISCTNKKELKKVEEIAEEIYKTVNGKI 221


>gi|291276513|ref|YP_003516285.1| putative thymidylate kinase [Helicobacter mustelae 12198]
 gi|290963707|emb|CBG39540.1| putative thymidylate kinase [Helicobacter mustelae 12198]
          Length = 193

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 23/208 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+ +GKTT I LLK            TREPGG+   E  R ++L    +    
Sbjct: 1   MYIVFEGIDTSGKTTQIELLKPLFP----HAIFTREPGGSRIGEKIRKMILEQ--EGLNP 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R  H+  VI P   +  +++ DR   S  AY              L   +
Sbjct: 55  TAEFFLFLADRAQHISEVILPH--KKDLIIADRSFVSGIAYA----EDLFPEAYELNLFA 108

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN- 183
           +Q ++PD  I+  +  +   KR++N+++       D  E++ +    + ++  L I +  
Sbjct: 109 MQGLLPDKVIVFKIDQEDLCKRLKNKHN-------DVIEKRGMDYLLRVQENLLSITKRL 161

Query: 184 QPDRCH---IVDSAHSFQSVATNILNIV 208
           + +R     ++D+  + + +   IL  +
Sbjct: 162 EKERGVERLVLDAGKNPRDLHQEILKAL 189


>gi|220917316|ref|YP_002492620.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955170|gb|ACL65554.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 219

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 18/198 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDE 61
           F+  EG++GAG TT   LL   L+      HVT EP G P     R VL          +
Sbjct: 18  FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGVAGAD 77

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F   A A++FAA R DH    I P L  G  ++ DR+  SS AYQG         ++ ++
Sbjct: 78  FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWVR 133

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---L 178
           +++     PD T+ L +  ++ L+R       R +A LD    +      K    +   +
Sbjct: 134 QVNGAAGPPDATLFLRVRPEVALRR-------RRAASLDREIYEVGAFQRKVAAEYDRAI 186

Query: 179 DIARNQPDRCHIVDSAHS 196
            + R   +    +D    
Sbjct: 187 ALLRQAGESVIEIDGERP 204


>gi|313891688|ref|ZP_07825295.1| dTMP kinase [Dialister microaerophilus UPII 345-E]
 gi|313119966|gb|EFR43151.1| dTMP kinase [Dialister microaerophilus UPII 345-E]
          Length = 224

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 85/225 (37%), Gaps = 20/225 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
            G  I  EGI+G+GK T   LL   L++ N  V     P     + +   + L+      
Sbjct: 2   GGKLIVLEGIDGSGKATQSQLLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
            ++    A ++ +A  R    +        +G I++ DR+  S+  +Q  +   +  +  
Sbjct: 62  PEDVNPYAASMFYAVDRFASYKMKWEKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121

Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FL  L+E     +    PD  I+LD+P++I  K V+ R        +D  E+  +    K
Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKERALS--GGNMDIHEK-HLDYLHK 178

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
               +  + +        +           + +A  I   V   +
Sbjct: 179 CYDSYQWLCKRY--NWEKISCTNKKELKKVEEIAEEIYKTVNRKI 221


>gi|197122531|ref|YP_002134482.1| dTMP kinase [Anaeromyxobacter sp. K]
 gi|196172380|gb|ACG73353.1| dTMP kinase [Anaeromyxobacter sp. K]
          Length = 219

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 18/198 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDE 61
           F+  EG++GAG TT   LL   L+      HVT EP G P     R VL          +
Sbjct: 18  FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGAAGAD 77

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F   A A++FAA R DH    I P L  G  ++ DR+  SS AYQG         ++ ++
Sbjct: 78  FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWVR 133

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---L 178
           +++     PD T+ L +  ++ L+R       R +A LD    +      K    +   +
Sbjct: 134 QVNGAAGPPDATLFLRVRPEVALRR-------RRAASLDREIYEVGAFQRKVAAEYDRAI 186

Query: 179 DIARNQPDRCHIVDSAHS 196
            + R   +    +D    
Sbjct: 187 ALLRQAGESVIEIDGERP 204


>gi|28573735|ref|NP_611290.3| CG5757 [Drosophila melanogaster]
 gi|28380736|gb|AAF57756.2| CG5757 [Drosophila melanogaster]
 gi|220949114|gb|ACL87100.1| CG5757-PA [synthetic construct]
 gi|220958186|gb|ACL91636.1| CG5757-PA [synthetic construct]
 gi|223967371|emb|CAR93416.1| CG5757-PA [Drosophila melanogaster]
 gi|223967373|emb|CAR93417.1| CG5757-PA [Drosophila melanogaster]
 gi|223967377|emb|CAR93419.1| CG5757-PA [Drosophila melanogaster]
 gi|223967379|emb|CAR93420.1| CG5757-PA [Drosophila melanogaster]
 gi|223967385|emb|CAR93423.1| CG5757-PA [Drosophila melanogaster]
 gi|223967387|emb|CAR93424.1| CG5757-PA [Drosophila melanogaster]
 gi|223967391|emb|CAR93426.1| CG5757-PA [Drosophila melanogaster]
          Length = 211

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFNRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I +I  EL+ K
Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|39938830|ref|NP_950596.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|39721939|dbj|BAD04429.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 204

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 7/173 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKTT I  +++ L+++ ++V   +  G +   +  R + L+    +   
Sbjct: 2   KLIVFEGLDGSGKTTLIQKIRKQLEKQGHEVITLQGLGSSSIGQPLRDIFLT--NAQLKP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++  A      E  I+P L   KI+L DR+L S++AYQ    +    +      ++
Sbjct: 60  LTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNY-QLFNLLN 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            Q + PD T+ L +   +GL+R QN+   +    LD  E   +    +  Q +
Sbjct: 119 KQFIKPDMTVYLKIKPQLGLERKQNQKDHK----LDVIETHPLSYFRQVSQGY 167


>gi|68067163|ref|XP_675552.1| thymidylate kinase [Plasmodium berghei strain ANKA]
 gi|56494802|emb|CAH95718.1| thymidylate kinase, putative [Plasmodium berghei]
          Length = 218

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 20/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG++ +GK+T   LL   L+  N  V     P             L      
Sbjct: 13  KKGNFIVFEGVDRSGKSTQSKLLVEHLKNNNIQVQYLCFPNRETTIGKIIANYLKMEST- 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F  E   ++F+A R + ++  I+  L+ G  ++CDR+  S  AY            +   
Sbjct: 72  FSNETIHLLFSANRWEMMDQ-IKNLLINGIWVICDRYAYSGVAYSSGALKLPK---EWCM 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L++P      R     S       + FE     I ++  + +   +
Sbjct: 128 NPDKGLIKPDAVCYLNVPPTYAKNR-----SEYGKEIYEKFE-----IQKRIYEAYEHFS 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV---QKRVSPLSS 221
               D    +D+  S Q +   I+  + ++    +K++  L S
Sbjct: 178 NE--DYWINIDATKSIQEIHNTIVEEISKMCSSKKKQLEYLWS 218


>gi|156380955|ref|XP_001632032.1| predicted protein [Nematostella vectensis]
 gi|156219082|gb|EDO39969.1| predicted protein [Nematostella vectensis]
          Length = 214

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 85/227 (37%), Gaps = 24/227 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I FEG + +GK+T   LL  +L+    ++   R P   T   +     L   G  
Sbjct: 5   TRGALICFEGCDRSGKSTQSRLLVDYLRSLGTNIEHMRFPDRSTAIGQCINSYL--QGTS 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    A  ++F+A R + V   IR  L  G  ++ DR+  S  A+   +       L+  
Sbjct: 63  ELDDHAIHLLFSANRWESVSK-IRSLLNTGTTIVVDRYAFSGVAFTSAKKGFD---LEWC 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I LD+ VD   +R +           + +E             + ++
Sbjct: 119 KAPDRGLPAPDIVIFLDISVDNAAERSE--------YGGERYE--TSDFQRSVANRYKEL 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKK 223
                D   ++D+  S + +   I  I  E ++    K +  L + K
Sbjct: 169 QA---DSWKVLDAGKSIEELHKEIQKIACETIKLASDKALETLWTSK 212


>gi|195584457|ref|XP_002082023.1| GD25418 [Drosophila simulans]
 gi|194194032|gb|EDX07608.1| GD25418 [Drosophila simulans]
          Length = 211

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLRAP--------SNDLTNRGQYGEERYEK--VEFQGRVAEVFDRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I +I  EL+ K
Sbjct: 169 SKEASYFHKFDATQSVEDLHAQIGSITEELLPK 201


>gi|218437720|ref|YP_002376049.1| dTMP kinase [Cyanothece sp. PCC 7424]
 gi|218170448|gb|ACK69181.1| dTMP kinase [Cyanothece sp. PCC 7424]
          Length = 207

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 21/216 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M   LFI  EGI+G+G +T  SLL+ +   K     ++ EP      +  R  +      
Sbjct: 1   MKK-LFIVLEGIDGSGTSTQASLLQDYFINKGEKAVISPEPTSGVIGKLIREAMQKPIIC 59

Query: 58  -GVDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               +   +  A +FAA R  H+ N    V +    +   ++  R+  SS AY       
Sbjct: 60  LEDQQKFDQQMAYLFAADRHYHLYNDSDGVFKLIEKDQCHVITTRYYFSSLAYNCHT-PE 118

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +  F+  L E   +   PD  I +DLPV++ L+R+Q R         D +E ++ +    
Sbjct: 119 EFKFVSQLNE---RFPNPDLVIYIDLPVEVSLERLQERTIK------DVYENREKLTQ-- 167

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            R  + +I          +D   +   +  NIL  V
Sbjct: 168 VRNNYHNIFSRYNGLILKIDGTETIIKINQNILKFV 203


>gi|116805958|emb|CAL26358.1| CG5757 [Drosophila melanogaster]
          Length = 211

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFDRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I +I  EL+ K
Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|313682360|ref|YP_004060098.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994]
 gi|313155220|gb|ADR33898.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994]
          Length = 193

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 15/208 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I  L+        D  +T+EPGGT      R+++L   +     
Sbjct: 1   MYIAIEGIDTAGKSTQIEALRSLFP----DALITKEPGGTTVGTEIRNMVLHGNLK--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H E+VI P +   K+++ DR   S  AY   ++      L  L  ++
Sbjct: 55  TAELLLFLADRAEHTESVILPNMN--KLIISDRSAVSGMAYASVQNLCDEPVLVMLNRLA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
               +PD   IL L  +    R+  +         D  E +        +   +  A   
Sbjct: 113 TGGTLPDTVFILKLTSEELSYRLSQKEH-------DVIESRGTEYLLGIQDALIASAYAL 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
             +  ++D+  S  ++   I   +   +
Sbjct: 166 GIQTVVIDATQSIDTITKEITTFIKGAL 193


>gi|164688846|ref|ZP_02212874.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM
           16795]
 gi|164602050|gb|EDQ95515.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM
           16795]
          Length = 224

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 12/222 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
            G  I  EG +G+GK T    L   L+ +NY +     P     + A   + L       
Sbjct: 2   KGKLIIIEGSDGSGKATQTKKLYDRLEAENYKIKKVEFPNYNSESSALVKMYLRGDFGKN 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116
             +      +  +A  R    +         G I++CDR+  S+  +Q  +  +S +  +
Sbjct: 62  ATDVDPYVCSTFYAVDRYASFKTGWEEFYNNGGIIICDRYTTSNMVHQASKIDESERDKY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L ++         PDC I LD+PV++    +Q+R +             D    +K 
Sbjct: 122 LDWLNDLEFNLYKIPKPDCVIFLDVPVEVSKSLMQDRNNKITGESEKDIHESDFEYLKKS 181

Query: 174 RQIFLDIARNQP-DRCHIVDSAH--SFQSVATNILNIVWELV 212
            +  + IA      R + +++    +   +   I +I+ + +
Sbjct: 182 YENSIYIADKYDWKRINCIENNQLRTIDDIHNEIYSIIEDEI 223


>gi|301118893|ref|XP_002907174.1| thymidylate kinase [Phytophthora infestans T30-4]
 gi|262105686|gb|EEY63738.1| thymidylate kinase [Phytophthora infestans T30-4]
          Length = 216

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 20/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG-GTPAAEAARHVLLSCG 58
             G+F+ FEG++  GKTT   LL   L   +      +   P   T   ++    L S  
Sbjct: 3   RRGIFLLFEGVDRCGKTTQTKLLHDALNASSSSQPSALLHFPDRSTAIGKSIHSYLTSS- 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +        ++F+A R +     I   L  G+ ++ DR+  S  A+   +       LD
Sbjct: 62  -EAMDDHVIHLLFSANRWEAASK-IESILASGQHIIMDRYSFSGVAFSAAKSGMS---LD 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                 +    PD  I LD+PV     R             + +E       EK  + F 
Sbjct: 117 WCWAPEIGLPKPDAIIFLDVPVTQASTRA--------DFGQERYE--TTAFQEKVYRNFY 166

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV-SPLS 220
           DI      + H+VD+  + + V   ++ I  E ++K   SPL+
Sbjct: 167 DIMERATPKWHVVDATGTIEQVQEKVMAIAKETIKKYAESPLT 209


>gi|40556108|ref|NP_955193.1| CNPV170 thymidylate kinase [Canarypox virus]
 gi|40233933|gb|AAR83516.1| CNPV170 thymidylate kinase [Canarypox virus]
          Length = 212

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 16/222 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+FI  EG++ +GKT     L +++  K Y     + P          +  L   ++
Sbjct: 1   MQRGMFIVLEGLDRSGKTVQCEKLLQYMLEKGYKTESLKFPNRETEIGKVINSYLEKKIN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F+A R + + ++I+  L     L+ DR+  S  A+   +++     L+  
Sbjct: 61  -INDRAIHLLFSANRWE-LADLIKDKLSHNINLIVDRYAFSGAAFTAAKNNVS---LEWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +       +PD  I LD+             S RE+  ++ +E       ++ R+ F D+
Sbjct: 116 KLTDSGLPLPDLVIFLDISASES--------SDRENFGMERYE--TASFQDEVRKRFYDL 165

Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            +        ++D+  + + +   I  +V +++ K   P+ S
Sbjct: 166 IKGTDSINWKVIDATKTIEDIHEEIKLLVEDVIDKLNDPIGS 207


>gi|169776481|ref|XP_001822707.1| thymidylate kinase [Aspergillus oryzae RIB40]
 gi|83771442|dbj|BAE61574.1| unnamed protein product [Aspergillus oryzae]
          Length = 225

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK++    L+ +LQ   + V   R P  T A        L  G  +
Sbjct: 10  TRGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYL-RGQSQ 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + +  VI   + +G  ++ DR+  S   Y   +     L L    
Sbjct: 69  LDDHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVYSAAK-GIPTLSLGWAW 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L +      KR            ++ +E + +    + R++F  + 
Sbjct: 127 QPEVGLPRPDMCLFLRISPTEAAKR--------GGFGVERYENETM--QSRVRELFQTLF 176

Query: 182 RNQPDR-CHIVDSAHSFQSVATNILNIVWELVQK 214
             QP+   H+V++  SFQ V+  I     + + +
Sbjct: 177 DLQPNGDIHVVNAGRSFQEVSEEIRGKATDCIAR 210


>gi|185177554|pdb|2PLR|A Chain A, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus
           Tokodaii Strain7
 gi|185177555|pdb|2PLR|B Chain B, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus
           Tokodaii Strain7
          Length = 213

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 100/218 (45%), Gaps = 17/218 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+FEGI+G+GK++  +LLK +++ K  DV++T         +  +        D 
Sbjct: 2   KKGVLIAFEGIDGSGKSSQATLLKDWIELK-RDVYLTEWNSSDWIHDIIKEA---KKKDL 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 +++ A    D  E  I P L  G I++ DR++ ++YA    RDS + + +D ++
Sbjct: 58  LTPLTFSLIHATDFSDRYERYILPXLKSGFIVISDRYIYTAYA----RDSVRGVDIDWVK 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYF-----ERKDVMIHEKRR 174
           ++    + PD T  + +  DI L+R++        + A  D F     E   +       
Sbjct: 114 KLYSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGLIT 173

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +++  + ++  +   ++D   + + +   I   V EL+
Sbjct: 174 EVYDKLVKD--ENFIVIDGTKTPKEIQIQIRKFVGELI 209


>gi|148264611|ref|YP_001231317.1| dTMP kinase [Geobacter uraniireducens Rf4]
 gi|146398111|gb|ABQ26744.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 228

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 18/215 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG++G+GK+T + LLKR+L+ +   V+ T         +A              
Sbjct: 11  GKLIAVEGLDGSGKSTQLYLLKRWLELRGLKVYFTEWNSSVIVKKATSK---GKKRQLLT 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ +A   D  E  I P L  G ++LCDR++ +++A    R  S+  +L +L   
Sbjct: 68  PTTFSLIHSADLADRYERQILPLLKAGYLVLCDRYVYTAFARDAVRGCSR-TWLRNLYGF 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL-------DYFERKDVMIHEKRRQ 175
           +     PD T+  D P+ + L R+   R  L+            D ++   +   E+   
Sbjct: 127 ARH---PDLTLFFDTPLSVALSRILSGRPQLKYHEAGMDLGLANDPYQSFRL-FQERIYN 182

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +L +          +D + S +     +  IV +
Sbjct: 183 EYLGMRDEFS--FVTIDGSVSIEEQQIKVREIVGQ 215


>gi|327267155|ref|XP_003218368.1| PREDICTED: thymidylate kinase-like [Anolis carolinensis]
          Length = 212

 Score =  152 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 15/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L  K +   + R P  T          L    + 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRRLVEALGAKGHRAELLRFPERTTKIGQLISSYLEKKNN- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  L+  +
Sbjct: 63  LEDHTVHLLFSANRWEQVP-LIKEKLNQGITLVVDRYAFSGVAFTGAK---ENFSLEWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L      KR             + +E  +    EK  Q + D+ 
Sbjct: 119 QPDVGLPKPDVILFLQLNTSEAAKR--------GDFGSERYE--NSSFQEKVLQCYYDLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            ++     ++D++ + + +   I +IV E +Q+
Sbjct: 169 EDKTLNWKVIDASKTIEDLHNEIKSIVEEAMQE 201


>gi|312194212|ref|YP_004014273.1| hypothetical protein FraEuI1c_0317 [Frankia sp. EuI1c]
 gi|311225548|gb|ADP78403.1| protein of unknown function DUF894 DitE [Frankia sp. EuI1c]
          Length = 820

 Score =  152 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 9/217 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
           ++GLF++ EG +   +   +  L+R+L     +V VT E P  T   EAA   +      
Sbjct: 560 HAGLFVAIEGADFRSRADQLESLRRWLLEAGREVLVTAESPADTSELEAALRTVQPDPAA 619

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  A++ AA   +HV  VI PAL  G ++L D ++D+  A Q     +    L  L
Sbjct: 620 GLHPRTTALLTAAIHAEHVARVIEPALARGAVVLTDSYVDAEIARQSAEACAALDELTIL 679

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              + + ++PD TI+LD+       R        +   S           +  ++ R   
Sbjct: 680 SHWATRSLVPDVTILLDVEP-----RNPSAPGTPANGTSTNGARANGHGGLFDQRVRAAL 734

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           L +A ++P R  ++D       +   I   V   + +
Sbjct: 735 LQLADDEPHRYLVLDGTAPASELRGRIRQAVQRRLTE 771


>gi|238503185|ref|XP_002382826.1| thymidylate kinase [Aspergillus flavus NRRL3357]
 gi|220691636|gb|EED47984.1| thymidylate kinase [Aspergillus flavus NRRL3357]
          Length = 225

 Score =  152 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK++    L+ +LQ   + V   R P  T A        L  G  +
Sbjct: 10  TRGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYL-RGQSQ 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + +  VI   + +G  ++ DR+  S   Y   +     L L    
Sbjct: 69  LDDHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVYSAAK-GIPTLSLGWAW 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L +      KR            ++ +E + +    + R++F  + 
Sbjct: 127 QPEVGLPRPDMCLFLRISPTEAAKR--------GGFGVERYENETM--QSRVRELFQTLF 176

Query: 182 RNQPDR-CHIVDSAHSFQSVATNILNIVWELVQK 214
             QP+   H+V++  SF+ V+  I     + + +
Sbjct: 177 DLQPNGDIHVVNAGRSFKEVSEEIRGKATDCIAR 210


>gi|50548641|ref|XP_501790.1| YALI0C13354p [Yarrowia lipolytica]
 gi|49647657|emb|CAG82100.1| YALI0C13354p [Yarrowia lipolytica]
          Length = 204

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 20/208 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+ EG++ +GK+T    L   L +      H+ + P  +       +  L+ GV  
Sbjct: 2   RGRFIAIEGLDRSGKSTQCDRLVAHLTETTGNKTHLFKFPDRSTPMGQIINQYLTSGV-A 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A  ++F+A R + +E+ I+  L +G+ ++ DR+  S   Y   +   +        
Sbjct: 61  LSDQAIHLLFSANRWERIED-IKALLEKGENVVLDRYYISGIVYTQAKGLERQ----WCT 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +   +PD T+ L +  ++  +R         +   + +E+  +   ++   +F ++A
Sbjct: 116 NPDLGLPVPDITLFLTVSPEVASQR--------GAYGEERYEK--IAFQKRVAALFHEVA 165

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +     C  VD++ + + VA  I   V 
Sbjct: 166 QRN---CITVDASGTEEEVANAINQCVE 190


>gi|116330468|ref|YP_800186.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|122281774|sp|Q04UJ2|KTHY_LEPBJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116124157|gb|ABJ75428.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 205

 Score =  152 bits (385), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 14/214 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
             +F+ FEGI+G+GK+T    L   L  +        EP      +  R  L   G  + 
Sbjct: 5   KPIFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFTEPTNFETGKYLRKFL--RGEIDL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + +   F   R + +   I P+L  GK +L DR++ S+ AYQ   D      ++  + 
Sbjct: 63  ERKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQSGDDLLPETIIE--KN 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +     +PD    LDL   I L+R+  R   +E      FE   +   EK R  +  I  
Sbjct: 121 LKKNFKIPDLLFYLDLNPAIALERLSQRKENKE-----RFE--TLAQLEKIRSAYNRIL- 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             P     +D       +    L I      K+ 
Sbjct: 173 --PKETIRIDGVKGPDEIVQECLEIFLRNFNKKF 204


>gi|67925004|ref|ZP_00518388.1| Thymidylate kinase [Crocosphaera watsonii WH 8501]
 gi|67853148|gb|EAM48523.1| Thymidylate kinase [Crocosphaera watsonii WH 8501]
          Length = 208

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 20/214 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GVD 60
           LFI  EGI+ AGKTT   LLK +L ++N    ++ EP      +  R  + +        
Sbjct: 4   LFIVLEGIDKAGKTTQAELLKHYLIKQNNSAIISSEPTEGVIGKLIRKAMQNPVFVMKDK 63

Query: 61  EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   +  A +FAA R  H+ N    V +    +   ++  R+  SS AY    +++    
Sbjct: 64  EKFDQQMAYLFAADRHYHLYNEVDGVYKLIKQDHCHVIATRYYFSSLAY----NTNNQEE 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            D +  ++ +   PD  I LD+P+D+ L R++   +       +          ++ +  
Sbjct: 120 FDFVYGLNKRFPNPDVVIYLDIPLDVALCRLEKVTNKEVYETQEKL--------QQVKDN 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  I  +   +   +D+ +S + +   I + + +
Sbjct: 172 YEQIFHSYDGKILRIDAQYSREQIHKQITDYLEK 205


>gi|227826765|ref|YP_002828544.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|227829399|ref|YP_002831178.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|229583935|ref|YP_002842436.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238618864|ref|YP_002913689.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|284996770|ref|YP_003418537.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
 gi|227455846|gb|ACP34533.1| dTMP kinase [Sulfolobus islandicus L.S.2.15]
 gi|227458560|gb|ACP37246.1| dTMP kinase [Sulfolobus islandicus M.14.25]
 gi|228018984|gb|ACP54391.1| dTMP kinase [Sulfolobus islandicus M.16.27]
 gi|238379933|gb|ACR41021.1| dTMP kinase [Sulfolobus islandicus M.16.4]
 gi|284444665|gb|ADB86167.1| dTMP kinase [Sulfolobus islandicus L.D.8.5]
 gi|323473847|gb|ADX84453.1| dTMP kinase [Sulfolobus islandicus REY15A]
 gi|323476501|gb|ADX81739.1| dTMP kinase [Sulfolobus islandicus HVE10/4]
          Length = 213

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 99/217 (45%), Gaps = 16/217 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+FEGI+G+GK++   LLK +++ +  DV++T         +  +        +  
Sbjct: 2   KGLLIAFEGIDGSGKSSQAVLLKDWIEMR-RDVYLTEWNSSDWIHDIIKEA---KKKNTL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                +++ A    D  E  I P L  G +++CDR++ ++YA    RD  +++  + +++
Sbjct: 58  TPTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKK 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDY-----FERKDVMIHEKRRQ 175
           +    + P+ T  + +  ++ L+R++        + A +D       E   +       +
Sbjct: 114 LYSFAIKPNFTFYIRVTPEVALERIKKAKRKIKPQEAGIDILGELPLEEGFLKYQGMVVE 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           I+  IA+ + +    +D     + V  +I  I+ E +
Sbjct: 174 IYDKIAKEESN-FITIDGNRPLKDVQMDIRKILGEYI 209


>gi|195436525|ref|XP_002066218.1| GK22056 [Drosophila willistoni]
 gi|194162303|gb|EDW77204.1| GK22056 [Drosophila willistoni]
          Length = 209

 Score =  152 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 82/216 (37%), Gaps = 19/216 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCG 58
           M  G FI FEG + +GKTT   LL   LQ           P    +   +     L    
Sbjct: 1   MQRGAFIVFEGCDRSGKTTQSRLLVEKLQANGVSTVHLNFPERKSSQIGQVINSYL--TN 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +   E   ++F+A R +H+ N +R  L  G  L+ DR+  S  AY   +     L L+
Sbjct: 59  SQDLPDEVIHLMFSANRWEHL-NRMRKQLEAGTTLVVDRYSYSGVAYTVAKG----LDLN 113

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    + PD    L   +D   KR         S   + +E+  +    K   +F 
Sbjct: 114 WCYAPERGLLKPDAVFYLKTELDELAKR--------GSYGTERYEK--LEFQRKVSSVFD 163

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +   +    H ++++   + +   I  I  +L+++
Sbjct: 164 CLYERESSYWHRLNASDKVEDLHQQIAQISEKLLEQ 199


>gi|303319671|ref|XP_003069835.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240109521|gb|EER27690.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320034114|gb|EFW16059.1| thymidylate kinase [Coccidioides posadasii str. Silveira]
          Length = 228

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 14/220 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ AGK+T  ++L   L+ K ++    R P  T +        L  G  
Sbjct: 14  MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYL-RGET 72

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A  ++F+A R + + + IR  +  G  ++ DR+  S   Y   + +++ L L+  
Sbjct: 73  QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAK-NNRELSLEWA 130

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +    PD    L++  +    R            L+ +E   + +  +  ++F  +
Sbjct: 131 WQSEIGLPRPDLWFFLNISPEKAESR--------GGYGLERYENVTLQL--RVGELFKSM 180

Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
              +  +   I+D+  S + VA +I   V   V     PL
Sbjct: 181 QGMENNEEMRIIDANQSKEQVARDISAQVLAAVDSIEGPL 220


>gi|116805954|emb|CAL26356.1| CG5757 [Drosophila melanogaster]
 gi|116805960|emb|CAL26359.1| CG5757 [Drosophila melanogaster]
 gi|116805962|emb|CAL26360.1| CG5757 [Drosophila melanogaster]
 gi|116805964|emb|CAL26361.1| CG5757 [Drosophila melanogaster]
 gi|116805966|emb|CAL26362.1| CG5757 [Drosophila melanogaster]
 gi|116805968|emb|CAL26363.1| CG5757 [Drosophila melanogaster]
 gi|116805972|emb|CAL26365.1| CG5757 [Drosophila melanogaster]
 gi|116805974|emb|CAL26366.1| CG5757 [Drosophila melanogaster]
 gi|116805976|emb|CAL26367.1| CG5757 [Drosophila melanogaster]
          Length = 211

 Score =  152 bits (384), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLRSPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFDRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I +I  EL+ K
Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|170097605|ref|XP_001880022.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645425|gb|EDR09673.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 228

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 29/235 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG++ +GKTT  SLL   L+ +     + + P  T          L     E    
Sbjct: 5   FIVIEGLDRSGKTTQTSLLHTRLEAEGIQAKLMKFPDRTTVIGQMIDSYL-RSDSELDDH 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-----SQHLFLDSL 120
              ++F+A R + + + I   L  G  ++CDR+  S  A+   +       S  L  +  
Sbjct: 64  VIHLLFSANRWE-LASYITQLLEAGTPIICDRYAFSGIAFSASKGIPSSTPSPKLPYEWC 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +    PD  + LD+  +        R  LR     + +E++++    + R IF  +
Sbjct: 123 RSPDIGLPAPDLVLFLDIAPE--------RAKLRGGYGEERYEKEEL--QARVRGIFQRL 172

Query: 181 ---ARNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQKR----VSPLSSKK 223
               +N+  R        VD+    + VA  + ++V  LV  R    V+ L S K
Sbjct: 173 GSEMQNETQRPVRPNWVTVDAGRERKVVANEVWSLVEPLVINRIDDPVAKLWSDK 227


>gi|170290822|ref|YP_001737638.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174902|gb|ACB07955.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 191

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 25/213 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++FEGI+GAGKTT    L   L         T+EP      +  +  L   G  E   
Sbjct: 1   MLVAFEGIDGAGKTTQSRRLLDKLMELGMRAIYTKEPTDGEIGKILKKALK--GEIELDQ 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++FAA R++H+      +L    I++ DR+L SS AYQG       L +  + E++
Sbjct: 59  RTIALLFAADRIEHIR-----SLKVDGIIILDRYLLSSLAYQGAF-----LPIQWINELN 108

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
               +PD    LD+  D+ + R++++                +      R+ +L + R +
Sbjct: 109 RWVRLPDIVFYLDISPDVAISRIEDKEIYH-----------SLDFLSIVRENYLKLIRVE 157

Query: 185 P--DRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           P     +++D+    + ++  ILNI+   + +R
Sbjct: 158 PWSSITYLIDAGREEEEISEEILNILLNKLGER 190


>gi|322712668|gb|EFZ04241.1| thymidylate kinase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 257

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 36/236 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG++ +GKTT + LL++    +   V V R P  T          L   V +
Sbjct: 21  KRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVRVMRFPDRTTPIGQMIDAYLKSDV-Q 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V+  I+  L  G  ++ DRF  S   Y   +  +  L L   +
Sbjct: 80  MEDHVIHLLFSANRWEAVDQ-IKTLLAAGTTVISDRFYHSGIVYSAAK-LNPSLPLSWAR 137

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  + LDL  +    R             + +E+    + ++ R++F  ++
Sbjct: 138 APERGLPRPDVVLFLDLDEETARAR--------GGWGGELYEK--AEMQKRVRELFWGLS 187

Query: 182 -----------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                                  R + +   +VD+  S + VA  I   +   V +
Sbjct: 188 MGGKDIQGQEMLAGLGGLEGAQWRQEEEDLVVVDAGGSVEEVADRIWGTLEGRVAQ 243


>gi|195383450|ref|XP_002050439.1| GJ22153 [Drosophila virilis]
 gi|194145236|gb|EDW61632.1| GJ22153 [Drosophila virilis]
          Length = 211

 Score =  151 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 22/224 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I FEG +  GKTT    L   L  K  D   T  P   T       H L      
Sbjct: 5   KRGALIVFEGCDRCGKTTQNRQLFELLTGKGVDTMQTNFPDRSTAIGNVINHYL--QNNQ 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   E   ++F+A R + + N I+  L+ G  ++CDR+  S  AY   +     L  +  
Sbjct: 63  ELSDEVIHLLFSANRWERM-NSIKKDLLAGTTVICDRYAYSGVAYSVAKG----LDFNWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +  + PD    L    D          + R +   + +E+  +    K  QIF   
Sbjct: 118 WAPEIGLLKPDAVFYLKATPDE--------LTTRGNYGEERYEK--LDFQRKVGQIFDRF 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           +       H  +++ S Q +   I      IV +  +K +  L+
Sbjct: 168 SEKDSSYWHTFEASKSQQELHAQIAIVAEKIVMQSAEKPLGKLA 211


>gi|71394067|gb|AAZ32106.1| thymidilate kinase [uncultured euryarchaeote Alv-FOS5]
          Length = 212

 Score =  151 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 29/224 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGV 59
           MN  +FI FEGI+ +GK T   LL + L++K + V++   P    P  +  +  L     
Sbjct: 1   MN--MFIVFEGIDASGKETQAKLLAKALKKKGHKVYMVDFPNYKNPIGKMIKKFL--DKK 56

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E   E  A+++AA R   +   I  AL + KI++ DR+  S+ AYQG    S    +  
Sbjct: 57  VELDVETRALLYAADRRYEL-KGITKALDDNKIVIADRYCYSNIAYQG----SLGANISW 111

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L  +    V PD    LD+P    L+R   +         D +E K     E+ R+ + +
Sbjct: 112 LASLDATLVFPDLVFYLDIPAKESLRRRTRK---------DRYESK-REFLERVRETYTN 161

Query: 180 IA-------RNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214
           +A           D      VD       +   IL  V   + +
Sbjct: 162 MATGNMRPFEKYKDYAEWITVDGTLPIDIIHKEILMQVEMRLPR 205


>gi|223967381|emb|CAR93421.1| CG5757-PA [Drosophila melanogaster]
 gi|223967389|emb|CAR93425.1| CG5757-PA [Drosophila melanogaster]
 gi|223967393|emb|CAR93427.1| CG5757-PA [Drosophila melanogaster]
          Length = 211

 Score =  151 bits (383), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  AY   +     L  D   
Sbjct: 64  LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 119 APERGLIKPDAVFYLRSPP--------NDLTYRGQYGKERYEK--VEFQGRVAEVFDRIC 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I +I  EL+ K
Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201


>gi|291533518|emb|CBL06631.1| thymidylate kinase [Megamonas hypermegale ART12/1]
          Length = 224

 Score =  151 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 19/228 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---- 56
           M  G  I  E  +G GK T   LL   L +  Y V     P     A     + L     
Sbjct: 1   MVKGKLIIIEAGDGCGKATQTKLLYDRLNQAGYKVKKVEYPDYESPACTPVKMYLQGEFG 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
             VD+  A A +++FA  R        +    EG I+L DR+  S+  +Q  +      +
Sbjct: 61  GHVDDVNAYAASVLFAVDRYASYRMKWKKDYEEGTIILADRYTTSNMVHQAVKIEDSKMR 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL  L +     +   +PD  I L++P DI  K + NR   +++   D  E+ D    
Sbjct: 121 DEFLSWLWDTEFTKMGLPVPDKVIFLNMPPDISNKLIDNRAK-KDNRKKDIHEQ-DKNYL 178

Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
           EK  +++ ++A        IV+ A      + + +  ++   +  L++
Sbjct: 179 EKCHEVYQEMANRYD--WDIVECAKDNQLRTIEEIHEDVWQKIQGLIK 224


>gi|116328926|ref|YP_798646.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|122283291|sp|Q04YY2|KTHY_LEPBL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|116121670|gb|ABJ79713.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
          Length = 205

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 14/205 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
             +F+ FEGI+G+GK+T    L   L  +        EP      +  R  L   G  + 
Sbjct: 5   KPIFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFTEPTNFETGKYLRKFL--RGEIDL 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             + +   F   R + +   I P+L  GK +L DR++ S+ AYQ   D      ++  + 
Sbjct: 63  ERKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQSGDDLLPETIIE--KN 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +     +PD    LDL   I L+R+  R   +E      FE   +   EK R  +  I  
Sbjct: 121 LKKNFKIPDLLFYLDLNPAIALERLSQRKENKE-----RFE--TLAQLEKIRSAYNRIL- 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNI 207
             P     +D       +    L I
Sbjct: 173 --PKETIRIDGVKGPDEIVQECLEI 195


>gi|312128607|ref|YP_003993481.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778626|gb|ADQ08112.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 240

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 18/221 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG + +G++T I LLK +L+   Y V  T         +           + 
Sbjct: 20  KRGKLIVIEGPDCSGRSTQIELLKEWLEASGYAVLNTGLKRSRLVGDVIERA---KKGNT 76

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G    ++++     D +EN I PAL  G ++L DR++ +  A    RD  +    + L+
Sbjct: 77  LGKTTLSLLYCCDFADQLENQIIPALSAGYVVLADRYIFTLMA----RDIVRGADKEWLK 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRY--------SLRESACLDYFERKDVMIHEKR 173
            +    ++PD  I LD+ +DI L R   +Y         +      D FE      H   
Sbjct: 133 RLLGFAIVPDLIIYLDVSIDILLTRTFQKYGHLDYWESGMDIQLSADMFESFKK-YHFLL 191

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++ + ++A+       ++D       +   I   + +++Q+
Sbjct: 192 KKEYEEMAKEY--NFVVIDGNQGVGIIQKRIREEILKILQE 230


>gi|272761235|gb|ACZ95829.1| thymidylate kinase [Jujube witches'-broom phytoplasma]
          Length = 217

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 7/173 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKTT I  +++ L+++  +V   +  G +   +  R + L+    +   
Sbjct: 5   KLIVFEGLDGSGKTTLIQKIRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT--NAQLKP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++  A      E  I+P L   KI+L DR+L S++AYQ    +    +      ++
Sbjct: 63  LTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNY-QLFNLLN 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            Q + PD T+ L +   +GL+R QN+   +    LD  E   +    +  Q +
Sbjct: 122 KQFIKPDMTVYLKIKPQLGLERKQNQKDHK----LDVIETHPLSYLRQVSQGY 170


>gi|229578187|ref|YP_002836585.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|229583122|ref|YP_002841521.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
 gi|228008901|gb|ACP44663.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14]
 gi|228013838|gb|ACP49599.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51]
          Length = 213

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 100/217 (46%), Gaps = 16/217 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+FEGI+G+GK++H  LLK +++ +  DV++T         +  +        +  
Sbjct: 2   KGLLIAFEGIDGSGKSSHAVLLKDWIEMR-RDVYLTEWNSSDWIHDIIKEA---KKKNTL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                +++ A    D  E  I P L  G +++CDR++ ++YA    RD  +++  + +++
Sbjct: 58  TPTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKK 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDY-----FERKDVMIHEKRRQ 175
           +    + P+ T  + +  ++ L+R++        + A +D       E   +       +
Sbjct: 114 LYSFAIKPNFTFYIRVTPEVALERIKKAKRKIKPQEAGIDILGELPLEEGFLKYQGMVVE 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           I+  IA+ + +    +D     + V  +I  I+ E +
Sbjct: 174 IYDKIAKEESN-FITIDGNRPLKDVQMDIRKILGEYI 209


>gi|288921143|ref|ZP_06415431.1| thymidylate kinase [Frankia sp. EUN1f]
 gi|288347452|gb|EFC81741.1| thymidylate kinase [Frankia sp. EUN1f]
          Length = 859

 Score =  150 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++GLFI+ EG   AG    + LL+ +L     +V V RE  GTP + + R  LL      
Sbjct: 598 HAGLFITIEGDTAAGAEGQLDLLQEWLAASGREVVVVREKTGTPISASVRE-LLDAPSTR 656

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 A++ AA R + V  +I PAL  G I+L DR+  SS A+QG         L +L 
Sbjct: 657 PHFRTVALLDAADRAEQVARIIEPALARGAIVLADRYAASSKAFQGADPRLDQDELAALA 716

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           + +   ++PD T++LDLP +    R   R + R    
Sbjct: 717 QWATHSLLPDVTVLLDLPTE----RKAPRPTTRPRRA 749



 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 22/49 (44%)

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               H++ R+ F  IA   P R   VD+      +   I +++ E +++
Sbjct: 806 SAAYHQRVREQFRRIAAEDPARHVTVDATLPAPELHRQIRSVITERIRR 854


>gi|302851470|ref|XP_002957259.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
           nagariensis]
 gi|300257509|gb|EFJ41757.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f.
           nagariensis]
          Length = 546

 Score =  150 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 20/218 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           + G  I FEG +  GKTT    L   L+ +  D  + R P   T   +A    L+     
Sbjct: 11  SRGALIVFEGGDRCGKTTQCRKLVERLRSQGVDAVMWRFPDRSTSIGQAINAYLVEQSH- 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                   ++FAA R++  E ++R  L+ G+  L+ DR+  S  AY   +    HL +D 
Sbjct: 70  -MDDAVAHLLFAANRMEKREEMLR--LLSGRTTLVVDRYSYSGVAYTAAK-GVPHLSMDY 125

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            + + V     D  I +D+  +    R             + +E+  V   +K  + F  
Sbjct: 126 CRAVEVGLPAADLVIFMDMTAEATAAR--------GGYGQERYEK--VDFQQKVMKAFEA 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +     +R  ++D++ +   +   +  +   +VQ+ ++
Sbjct: 176 LRD---ERWAVIDASGTIDDIHQKVAAVAEPVVQRALA 210



 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 76/242 (31%), Gaps = 65/242 (26%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G FI FEGI+  GK+T  +LL   L+R+   V     P  +       +  L  G D 
Sbjct: 270 SRGAFIVFEGIDRCGKSTQSNLLVDHLRRRGVKVEHWCFPDRSTRIGQTINDYLHNGADH 329

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F A R +                   R+  S  AY   +    HL +D  +
Sbjct: 330 -DDTAIHLLFTANRFE------------------KRY--SGVAYTAAK-GVPHLSMDYCR 367

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--------- 172
            + V     D  I +D+  +    R             + +E+  +    K         
Sbjct: 368 AVEVGLPAADLVIFMDMTAEEAAAR--------GGFGAERYEK--LEFQRKASLGIVTGA 417

Query: 173 ---------------------RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                                  Q +  +  +       +D+    + +   +++ V  +
Sbjct: 418 WRRLVVTPAILMPLSCRPTKQVAQQYAALKDSH---WLRLDATQQPECLQQQVVDAVLPV 474

Query: 212 VQ 213
           V+
Sbjct: 475 VE 476


>gi|78777324|ref|YP_393639.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251]
 gi|123550247|sp|Q30RH7|KTHY_SULDN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78497864|gb|ABB44404.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251]
          Length = 191

 Score =  150 bits (381), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 15/204 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I+ L+        D  +T+EPGGT A +  R ++L+  +     
Sbjct: 1   MYIAIEGIDTAGKSTQIAKLQEHFS----DAIITKEPGGTEAGKEIREIVLNAKIK--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R +H++ VI P L   K+++ DR + S  AY   +       +  L   +
Sbjct: 55  KAEFLLFLADRAEHIQEVIEPNLS--KMIISDRSVVSGVAYALVQGEISETAILHLNRFA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P    +L L  +    R+  +        LD  E + +    K +   +  +   
Sbjct: 113 TGGIYPQKIFLLQLTNEELSLRLSQKK-------LDGIELRGIEYLLKIQDALIKASNLL 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                ++D+  +  S+   ILN +
Sbjct: 166 NIELVLIDATKNIDSITQEILNNI 189


>gi|153006218|ref|YP_001380543.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152029791|gb|ABS27559.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 564

 Score =  150 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 10/193 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           +F+SFEGI+G+GKT+  + +   L+   + V   RE G  G+  A   R +     + E 
Sbjct: 1   MFVSFEGIDGSGKTSLSNQVCERLRAAGHSVLHAREKGILGSAVARRVRELTRDARLLEM 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E  +  A     ++ ++RPAL  G I++ DR L S  A            +++   
Sbjct: 61  SPRTELFLNLARETQQLDEIVRPALAGGGIVVADRSLHSLVALAAAGRGLPREEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVM---IHEKRRQIF 177
           +      PD  +++D+  D  L R++ R         D  E  RK +    +  + R+  
Sbjct: 121 VGAAGTWPDLVVLVDVDPD--LARLRKRVGKILEGR-DRDEESRKGLAGAGLQVRVRRHL 177

Query: 178 LDIARNQPDRCHI 190
              A   P R  +
Sbjct: 178 RAEAERDPSRWIV 190


>gi|330835059|ref|YP_004409787.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina
           Ar-4]
 gi|329567198|gb|AEB95303.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina
           Ar-4]
          Length = 211

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 17/217 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+ EGI+G+GK++   LLK +L+ K  D ++T         E  +        +  
Sbjct: 2   RGHIIAMEGIDGSGKSSQAKLLKDWLENK-VDTYLTEWNSSDWIHEVIKEA---KKKNLL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                +++ A    D  E +I P    G  ++ DR+  +++A    RDS + + ++ +++
Sbjct: 58  TPLTFSLIHATDFADRYERLILPMYRIGFTVVSDRYFYTAFA----RDSVRGVNINWVRQ 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDYF-----ERKDVMIHEKRRQ 175
           +    + PD T  + +  ++ L R++   R    + A  D F     E   +       +
Sbjct: 114 LYSYAMKPDVTFFIRVTPEVALARLRENKRGIKPQEAGSDVFPDLDPEEGFLKYQGLVLE 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++  +A  +     I+D   S + +   I   V E++
Sbjct: 174 MYDKMASEEG--FVIIDGNKSPREIQIEIRRKVGEII 208


>gi|294626717|ref|ZP_06705312.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|294667167|ref|ZP_06732390.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292598965|gb|EFF43107.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292603066|gb|EFF46494.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 227

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 39/233 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLEAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG         L+    
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + R IF  +    P + H+VD++    SV      I+   +  R+S  ++  D
Sbjct: 163 RCRTIFAAL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212


>gi|328948690|ref|YP_004366027.1| thymidylate kinase [Treponema succinifaciens DSM 2489]
 gi|328449014|gb|AEB14730.1| Thymidylate kinase [Treponema succinifaciens DSM 2489]
          Length = 214

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 27/219 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI FEGI+GAG TT + +LK     +  +   T EP  +   +  R +L   G  +   E
Sbjct: 6   FIVFEGIDGAGTTTQLEILK----SRTPEFLFTAEPTSSETGKFLRKMLK--GEIQVTNE 59

Query: 66  AEAIVFAAARLDHVE-----------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             A +FAA R +H+              I+ A  +GKI++ DR+L SS AYQ    S   
Sbjct: 60  TAAYIFAADRNEHINGNCIIEENKLITGIKSACEKGKIVVSDRYLFSSLAYQSIDCS--P 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
               +L +      +P      D+  +I LKR+ +R        +D+ +R     +EK  
Sbjct: 118 EIPRTLNKF---FPLPRLLFFFDIEPEISLKRISSRGQKEIYEKIDFLKRTKEE-YEKVL 173

Query: 175 QIFL--DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +   +I++    +   +D+    + ++  I   +  +
Sbjct: 174 AEYNGTEISKGM--KIVRIDATADKEKISRKIEEEINSI 210


>gi|325923095|ref|ZP_08184788.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865]
 gi|325546410|gb|EGD17571.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865]
          Length = 227

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 97/233 (41%), Gaps = 39/233 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARSLATTLEAAGAHVVLSKEPTNGPWGTKLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G+I++ DR+  S  AYQG         L+    
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGEIVILDRYFPSMVAYQGAAGLPLDALLER-NA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + R IF  +    P + H+VD++    SV      IV   + +R+S  ++  D
Sbjct: 163 RCRAIFNTL--QLPGK-HVVDASADADSVLRQAHAIVVAALAERLSDDAAHTD 212


>gi|148264686|ref|YP_001231392.1| dTMP kinase [Geobacter uraniireducens Rf4]
 gi|146398186|gb|ABQ26819.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 227

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ++ EG++G+GK+T + LLKR+L+ +   V  T         +A              
Sbjct: 11  GKLVAVEGLDGSGKSTQLYLLKRWLELRGLKVFFTEWNSSVIVKKATSK---GKKRHLLT 67

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ AA   D  E  I P L  G ++LCDR+  +++A    R  S   +L SL E 
Sbjct: 68  PTTFSLIHAADFADRYERQILPLLKAGYLVLCDRYFYTAFARDAVRGCS-CTWLRSLYEF 126

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESAC-------LDYFERKDVMIHEKRRQ 175
           +     PD T+  D P+ + L R+   R  L+            D  E   +   E+  +
Sbjct: 127 AR---RPDLTLFFDTPLPVALSRILAGRPQLKYHEAGMDLGLSADPQESFRL-FQERIYR 182

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +L +          +D + + +     + ++V
Sbjct: 183 EYLAM--RDDCSFVTIDGSATVEDQQKVVRDLV 213


>gi|45358597|ref|NP_988154.1| thymidylate kinase [Methanococcus maripaludis S2]
 gi|59798295|sp|Q6LYF7|KTHY_METMP RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|44921355|emb|CAF30590.1| Thymidylate kinase [Methanococcus maripaludis S2]
          Length = 199

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 50/228 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI FEGI+G GKTT   L+   L         T EP      ++ R +L      
Sbjct: 1   MNK--FIVFEGIDGCGKTTQAKLVAEKLNAN-----FTFEPTDGKIGKSIREIL---AGS 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E  A++FAA R++HV  +      +   ++ DR++ SS  YQ         F+  +
Sbjct: 51  KCNKETLALLFAADRVEHVSKIEEDL--KNAHVVSDRYVYSSIVYQMT-QGIPKDFIYKI 107

Query: 121 QEISVQEVMPDCTIILDLP---------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            + +             +P         ++  LKR+++R         + FE+  +   +
Sbjct: 108 NDYAK------------IPDLVVLLDVDLNEALKRMESREK-------EIFEK--LEFQK 146

Query: 172 KRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212
           K ++ + ++  ++  +        ++D ++     V   ILN + + +
Sbjct: 147 KIKEGYYNLINSENGKFMPKYGFIVIDTTSKPIDQVFNEILNAIVDKI 194


>gi|39960728|ref|XP_364612.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15]
 gi|145010950|gb|EDJ95606.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15]
          Length = 240

 Score =  149 bits (378), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 37/230 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GKTT + LL++       +V V R P   TP  +     L S    +
Sbjct: 12  RGALIVLEGLDRSGKTTQVQLLEKRFLDLGRNVKVMRFPDRTTPIGQMIDGYLKSQ--VD 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +  +  I   L  G  +LCDR+  S   Y   + +   L L   +
Sbjct: 70  MDDHVIHLLFSANRWEAAKQ-ITDLLSAGTTVLCDRYYYSGMVYSAAKQN-PALPLSWAR 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD  + LDL  +    R             + +ER    +  + R++F  ++
Sbjct: 128 APEVGLPRPDLVLFLDLTEEQAKAR--------GGWGDELYER--AEMQRRVRELFWGLS 177

Query: 182 RNQPDRC-------------------HIVDSAHSFQSVATNILNIVWELV 212
                R                    H+VD++ S ++V   I  +V   V
Sbjct: 178 M---GRIEAGGGSQREERARQEEEDLHVVDASPSVEAVCEEIWKVVEPRV 224


>gi|269797674|ref|YP_003311574.1| thymidylate kinase [Veillonella parvula DSM 2008]
 gi|269094303|gb|ACZ24294.1| thymidylate kinase [Veillonella parvula DSM 2008]
          Length = 228

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 83/227 (36%), Gaps = 19/227 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+      V
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R              G I++ DR+  S+  +Q  +      +  F
Sbjct: 62  HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDSKERTAF 121

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L++   Q+     PD   +LD+P+++    +  R         D  E  +       
Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHTYLVAV 180

Query: 174 RQIFLDIARNQP-DRCHIVD-------SAHSFQSVATNILNIVWELV 212
              + ++ +     R   VD       +  + + +  ++ ++V  L+
Sbjct: 181 HDAYEELVKRYQWHRIPCVDKAKSSQYTLRTIEEIHNDVYSVVENLL 227


>gi|302410089|ref|XP_003002878.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
 gi|261357902|gb|EEY20330.1| thymidylate kinase [Verticillium albo-atrum VaMs.102]
          Length = 285

 Score =  149 bits (376), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 88/235 (37%), Gaps = 36/235 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           +  G  +  EG++ +GKTT + LL++        V V R P   TP  +     L S   
Sbjct: 50  ITRGALVILEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRSTPIGQMIDAYLKSS-- 107

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E       ++F+A R + V+  IR  L  G  +LCDR+  S   Y   + +   L L  
Sbjct: 108 VEMDDHVIHLLFSANRWEAVKT-IRQLLASGTTVLCDRYYHSGIVYSAAKHN-PSLSLHW 165

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +   V    PD  + LDL       R             + +ER    +  + R++F  
Sbjct: 166 ARAPDVGLPRPDLVLFLDLDEATAKSR--------GGWGGELYERG--EMQRRVRELFWG 215

Query: 180 IA---------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +A                     R + +   +VD+  S + VA  I   V   V+
Sbjct: 216 LAMGRIGADGGLGDEDRRVDREFRQEEEDLVVVDAGASVEEVAEGIWEKVQPRVE 270


>gi|321472932|gb|EFX83901.1| hypothetical protein DAPPUDRAFT_315306 [Daphnia pulex]
          Length = 148

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            AAAR +H+ +++ PAL EGK +LCDRF DS++AYQG        F+++L ++++    P
Sbjct: 1   MAAARREHLRHLVWPALEEGKWVLCDRFSDSTFAYQGFGHELGVSFVETLNQLTMGNFQP 60

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D T I  L  + GL R +           D +ER     H +  + +L +   +  RC  
Sbjct: 61  DLTFIFQLSEEAGLARKKESLVSE-----DRYERFPEEFHRRVSKGYLALLEAESQRCVP 115

Query: 191 VDSAHSFQSVATNILNIVWE 210
           + +  S + +A +I   + E
Sbjct: 116 LSAHTSIEVIADHIWRTLAE 135


>gi|213409950|ref|XP_002175745.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
 gi|212003792|gb|EEB09452.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275]
          Length = 209

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 12/210 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G F+ FEG++ +GK+T   LLK+ L  +     + R P  GT   +     L +   ++
Sbjct: 2   RGKFVVFEGLDRSGKSTQAELLKKALIDRGQRAILLRFPDRGTTIGKQIDAYLKNK--NK 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EA  ++F+A R + + + I  AL +G   + DR+  S  A+   +     +  D  +
Sbjct: 60  LPDEAIHLLFSANRWE-LASTIEAALADGVHCIVDRYSFSGVAFSAAKG----MDWDWCK 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +       PD  +   +  +I  KR        E   L  F+R     +   RQ F+   
Sbjct: 115 QPERGLPSPDIVLFFQVDPNIASKRA---GFGNERYELPVFQRTVAEKYALLRQEFVK-E 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           R   D   ++D   S + V   IL I   L
Sbjct: 171 RKNDDSWLMIDGNQSIEQVHLKILTIFGSL 200


>gi|146304784|ref|YP_001192100.1| thymidylate kinase [Metallosphaera sedula DSM 5348]
 gi|172046954|sp|A4YIC4|KTHY_METS5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|145703034|gb|ABP96176.1| thymidylate kinase [Metallosphaera sedula DSM 5348]
          Length = 196

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 31/222 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN    +  EGI+ +GKTT    L   L  + + V +T+EP      +  + +L      
Sbjct: 1   MN---LVVIEGIDASGKTTLAKRLAESLSPR-FKVLLTQEP----FTDDIKQLL--EKYQ 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  A++F+A R  HV+ +    +    +++ DR+  S+ AYQG        +L+SL
Sbjct: 51  WKDQVLLALLFSADRRIHVKWMESQNV---DLIISDRYFFSTLAYQGV--GVDRTWLESL 105

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             I     +P+ TI+LD+PV++ L+R++N+        LD FE K   +H+  R+ +L +
Sbjct: 106 SSI---FPLPNLTILLDVPVNVALERLRNKRD-----SLD-FEEKRKSLHQ-VRENYLSL 155

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           AR       I+D     + +     +I  ELVQ  +S  +S+
Sbjct: 156 ARRY--NFKILDGTLPLEKLT----SISLELVQGLLSSSTSR 191


>gi|85057502|ref|YP_456418.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789607|gb|ABC65339.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 210

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 7/173 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKTT I  +++ L+++ ++V   +  G +   +  R + L+    +   
Sbjct: 2   KIIVFEGLDGSGKTTLIQKIRKQLEKQGHEVINLQGLGSSSIGQPLRDIFLT--NSQLKP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++  A      E  I+P L   KI+L DR+L S+ AYQ    +    +      ++
Sbjct: 60  LTRYLLSFANMQQIQEEEIKPHLATNKIILIDRWLGSNLAYQAYPHNIDKNY-QLFNLLN 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            Q + P+ T+ L +   +GL+R QN+   +    LD  E   +    +  Q +
Sbjct: 119 KQFIKPNMTVYLKIKPQLGLERKQNQKDHK----LDVIETHPLSYFHQVSQGY 167


>gi|255322189|ref|ZP_05363335.1| thymidylate kinase [Campylobacter showae RM3277]
 gi|255300562|gb|EET79833.1| thymidylate kinase [Campylobacter showae RM3277]
          Length = 192

 Score =  148 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 14/206 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+GAGK+T I+ L            VT+EPGGT   E  R +LL    ++   
Sbjct: 1   MYILFEGIDGAGKSTQIARLA----AAYTQAIVTKEPGGTKLGENLREILL--KENDLDK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H   +I+P L   K++L DR   S  AY     +     L +L + +
Sbjct: 55  RAEILLFLADRAEHFGKIIKPNLD--KMILSDRGFVSGMAYALAGGNFSFEELLNLNKFA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +Q   P   +           R+  R      A +D  E +      + +    +I +  
Sbjct: 113 LQGNFPQKIVFFKADESTLRSRLGLR------AQMDGIEARGFEYLLRVQDAMEEILQKL 166

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
                 + +A   + +   I   + +
Sbjct: 167 GVCYVTIGAAWDEEKITNLIKEFIND 192


>gi|21244732|ref|NP_644314.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306]
 gi|23821767|sp|Q8PFG7|KTHY_XANAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21110424|gb|AAM38850.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 227

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 94/233 (40%), Gaps = 39/233 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L      V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLAATLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG         L+    
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + R IF  +    P + H+VD++    SV      I+   +  R+S  ++  D
Sbjct: 163 RCRTIFAAL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212


>gi|322378354|ref|ZP_08052810.1| thymidylate kinase [Helicobacter suis HS1]
 gi|322380924|ref|ZP_08054995.1| thymidylate kinase [Helicobacter suis HS5]
 gi|321146647|gb|EFX41476.1| thymidylate kinase [Helicobacter suis HS5]
 gi|321149211|gb|EFX43655.1| thymidylate kinase [Helicobacter suis HS1]
          Length = 206

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 20/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+ +GK+T I+LLK+       +   T+EPGGTP  +A R  +L     +  +
Sbjct: 8   MFIAIEGIDTSGKSTQINLLKQTFP----NALFTKEPGGTPLGQALREKILD---HKLSS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
            A+ ++F A R  H+E VI+P     +++  DR L S  AY           +D L +I 
Sbjct: 61  HAQFLLFLADRSLHIEEVIKP--NSHRLIFSDRSLISGLAYAP---CLLQEAID-LHKIH 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + EV+PD   +L L      KR+  + S      +D  E + V   E  ++  L+  + 
Sbjct: 115 GLLEVIPDLVFVLKLDHTELKKRLDKKTS------MDCIEAQGVAFLEHTQKRLLEACQI 168

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + +I+D++ S  S+  +IL  +  L+
Sbjct: 169 LKLKTYILDASKSPSSIHQSILEKLESLL 197


>gi|196234358|ref|ZP_03133186.1| dTMP kinase [Chthoniobacter flavus Ellin428]
 gi|196221550|gb|EDY16092.1| dTMP kinase [Chthoniobacter flavus Ellin428]
          Length = 245

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 18/218 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG  ++ EG++G+GK+T I L+KR+L+ + Y V  T       +    +           
Sbjct: 27  SGKLLAVEGLDGSGKSTQIYLVKRWLELEGYRVFFTEW---NSSILVKKSTSKGKKRQLL 83

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                +++ A    D  E  I P L  G ++LCDR++ ++ A    RD+ + +  D +++
Sbjct: 84  TPTTFSLIHATDFADRYERQILPLLRAGYLVLCDRYIFTALA----RDAVRGVDRDWVEQ 139

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNR-------YSLRESACLDYFERKDVMIHEKRR 174
           +    V+PD T+   +P++  L R+ + R         L      D +E   +    K  
Sbjct: 140 LYSFAVLPDITLYFRVPLETSLNRILEGRPALKYHEAGLDMGWSTDPYESFRI-FQGKVY 198

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +  +          VD+          + N++ E +
Sbjct: 199 AEYESMREKFG--FVPVDATEEIHVQQAKVRNLIKEKI 234


>gi|303277967|ref|XP_003058277.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460934|gb|EEH58228.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 214

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 16/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG++  GKTT  + L   L+    +  + R P  T +     +  L    +  
Sbjct: 7   RGAFILFEGVDRCGKTTQSTKLVEALKSSGVNAELWRYPDRTTSMGQMINSYLQSKTE-M 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A  ++FAA R +     +   L EG  L+ DR+  S  A+   +     L L+  + 
Sbjct: 66  DDGAIHLLFAANRWE-KRAAMEAKLAEGVTLVVDRYSYSGVAFTAAK-GIPGLDLEWCKS 123

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V  + PD  + L++PV+    R             + +E  D+   +  R  F  +  
Sbjct: 124 PEVGLLRPDAVLYLNMPVEAAAAR--------GGFGEERYETSDL--QKAVRANFDKLRE 173

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              D   IVD+  +   V      +  + V K
Sbjct: 174 ---DWWTIVDATGTVDEVHAACRAVADDAVAK 202


>gi|195027421|ref|XP_001986581.1| GH20447 [Drosophila grimshawi]
 gi|193902581|gb|EDW01448.1| GH20447 [Drosophila grimshawi]
          Length = 211

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 17/223 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG + +GKTT    L   L  K  D+     P  T       +  L     +
Sbjct: 5   KRGAFIVFEGCDRSGKTTQSRHLSSVLTSKGVDIKQINFPDRTTTIGGMINAYL-TNTQD 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R + V++ I+  L+ G  ++CDR+  S  AY   +     +  D   
Sbjct: 64  LKDEVIHLLFSANRWECVDS-IKKDLLAGTTVICDRYSYSGAAYSAAKG----VDFDWCC 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L   +D          + R S   + +E+  +    K  + F  + 
Sbjct: 119 APDRGLLEPDAVFYLKANLDE--------LTSRGSYGEERYEK--LDFQRKVGEQFDRLY 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS-PLSSKK 223
             +    H++D++ S Q +   I  +   ++Q+    PLS+ K
Sbjct: 169 AQRSSYWHLLDASKSLQELQDQIAAVADGVLQQAAEQPLSTIK 211


>gi|223996301|ref|XP_002287824.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976940|gb|EED95267.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 276

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 24/226 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGV 59
             G FI  EG++  GKTT +SLL + L   +      R P  +    +  +  L  S   
Sbjct: 34  KRGAFILLEGVDRCGKTTQVSLLVKHLLSLSLATVAYRFPDRSTQVGSLINSYLTSSTPT 93

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----- 114
                 A  ++F+A R +   ++ R  L  G  ++CDR+  S  A+   +          
Sbjct: 94  APLDDRAIHLLFSANRWEASTSLAR-TLASGTNIVCDRYAYSGVAFTSAKVEEDRGSMSG 152

Query: 115 --LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             L L+      V    PDC I LDL  D   KR             + +E++D+    +
Sbjct: 153 GELGLEWCIAPDVGLPAPDCVIFLDLEQDEAEKR--------GGYGGERYEKRDL--QMR 202

Query: 173 RRQIFLDIARNQPDR----CHIVDSAHSFQSVATNILNIVWELVQK 214
            R+ F ++            H+VD++ S + V   +++IV + +++
Sbjct: 203 VRKRFAELQSLDEQNGRVPWHVVDASQSIEEVTGELVSIVNDTIER 248


>gi|312897767|ref|ZP_07757183.1| dTMP kinase [Megasphaera micronuciformis F0359]
 gi|310621151|gb|EFQ04695.1| dTMP kinase [Megasphaera micronuciformis F0359]
          Length = 223

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 18/225 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58
            G  I  EG +G+GK T   LL+R L      V     P     + A   + L       
Sbjct: 2   KGHLIIIEGGDGSGKATQTELLRRHLADDGEFVKAVSYPDYDSESSALVKMYLRGDFGTD 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHL 115
            D     A +  +A  R+   E   +    +G I+L DR+  S+  YQ       + Q  
Sbjct: 62  ADTINPYAASAFYAVDRIASYELKWKRFFKDGGIVLADRYTTSNMLYQMIKIPGKADQDA 121

Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +LD L +     +    PD  I+LD+P+++  + +  R         D  E+ D     K
Sbjct: 122 YLDWLWDFEFKKLGLPEPDAVILLDVPLEVTERLMSERTGKTGGTTGDIHEK-DREFLRK 180

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
               ++ +A       + +D        S  ++  ++  +V  L+
Sbjct: 181 CHAAYVGLAAKYG--WYKIDCTREGVLRSPGAIHEDVYALVKGLI 223


>gi|16975316|pdb|1E9F|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Adp
          Length = 217

 Score =  147 bits (373), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 17/223 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++GAGK+T    L   L    +   + R P  +          L    D 
Sbjct: 7   RRGALIVLEGVDGAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 66  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR + R        L+ +E  +    E+  + F  + 
Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKRGRAR------GELERYE--NGAFQERALRCFHQLM 173

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 174 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELW 216


>gi|148907170|gb|ABR16728.1| unknown [Picea sitchensis]
          Length = 258

 Score =  147 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 23/210 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ +GK++    L   L  + + V   R P  T A        LS   D 
Sbjct: 53  KRGALIVLEGLDRSGKSSQCLKLASSLASQGFSVEAWRFPDRTTAMGKMISAYLSSKED- 111

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +   +++   +  G  L+ DR+  S  A+   +     L L   +
Sbjct: 112 MDDRTIHLLFSANRWE-KRSLMEAKMKAGTSLIVDRYSYSGVAFSAAKG----LDLSWCK 166

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD  + LD+  +   +R             + +E+  +    K  +++  ++
Sbjct: 167 APEVGLPAPDLVLYLDIAPEKAAER--------GGYGGERYEQ--LDFQRKVAELYTALS 216

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +      IVD++ S  SV      I+ EL
Sbjct: 217 DSA---WQIVDASLSIDSVH----KILKEL 239


>gi|171676382|ref|XP_001903144.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936257|emb|CAP60916.1| unnamed protein product [Podospora anserina S mat+]
          Length = 274

 Score =  147 bits (373), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 90/262 (34%), Gaps = 64/262 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ +GKTT + LL++        V V R P   TP  +     L      
Sbjct: 12  TRGALIVLEGLDRSGKTTQVKLLEQRFVELGKSVKVMRFPDRTTPIGQMINSYL--TSQT 69

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   ++F+A R +   ++I   L  G  ++CDR+  S   Y   + +   L L   
Sbjct: 70  TMSDHVIHLLFSANRWE-AASLITSLLSHGTTVICDRYYYSGIVYSAAKHN-PFLPLSWA 127

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--- 177
           +   V    PD  + LDL      KR             + +E+    +  + R++F   
Sbjct: 128 RSPEVGLPRPDLVLFLDLDEQEAKKR--------GGWGGEVYEK--AEMQRRVRELFWGL 177

Query: 178 ------------LDIA----------------------------------RNQPDRCHIV 191
                       L+ A                                  R + +  H+V
Sbjct: 178 SLGKIVGAPHSALECAPGEGAGTKGGEEEVAVGPPSAQTPDISGGVEHRFRQEEEDLHVV 237

Query: 192 DSAHSFQSVATNILNIVWELVQ 213
           D++ S + VA  +  +V + V+
Sbjct: 238 DASASVEEVAEGVWKVVRDRVE 259


>gi|255658922|ref|ZP_05404331.1| dTMP kinase [Mitsuokella multacida DSM 20544]
 gi|260848872|gb|EEX68879.1| dTMP kinase [Mitsuokella multacida DSM 20544]
          Length = 250

 Score =  147 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 82/227 (36%), Gaps = 19/227 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SC 57
             G  I  E  +G+GK T    L   L R+ Y VH    P     +     + L      
Sbjct: 3   RKGKLIIIEAGDGSGKATQTKALYDHLCREGYRVHRIEFPDYAADSSMLVRMYLRGDFGG 62

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114
             ++  A A +  FA  R        + A   G I+L DR+  S+  +Q  +      + 
Sbjct: 63  HAEDVNAYAASTFFAVDRYASYRMKWKKAYEAGAIILADRYTTSNMVHQAVKLTDRKERE 122

Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FLD L +     +   +PD  + LD+  ++  + +  R     +   D  ER D     
Sbjct: 123 AFLDWLWDFEFHKLGLPVPDKVVFLDMDPEVADRLIAARAE-ETAQEKDIHER-DRAYLH 180

Query: 172 KRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
           +    + ++A         V  +      S  ++  ++   V  L++
Sbjct: 181 RCHAAYEELAAKYG--WTRVACSENGEPRSVAAIYADVYAAVRPLLE 225


>gi|260796149|ref|XP_002593067.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
 gi|229278291|gb|EEN49078.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae]
          Length = 215

 Score =  147 bits (372), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 19/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GKTT    L   L++      + R P  T A  +  +  L    +  
Sbjct: 5   RGALIVLEGVDHSGKTTQCMKLVEALKKHGQKAELIRFPDRTTAIGSVINDYLGNKCE-L 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A  ++F+A R + V   +   L EG  L+ DR+  S  A+   +     L +  LQ 
Sbjct: 64  HDFAIHLLFSANRWEAVPR-MEKLLSEGTSLIVDRYAYSGVAFTAAKG----LDMRRLQH 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    PD  + L LP +   KR             + +E+ D    +K  + F  +  
Sbjct: 119 SDIGLPRPDLVMYLTLPPEEAAKR--------SEYGGERYEQTD--FQKKVAENFKVLQE 168

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +      I+++  + + + T+IL +  E + K
Sbjct: 169 DD---WKILNANQTIEELHTHILQLAKEAITK 197


>gi|32266861|ref|NP_860893.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449]
 gi|46576464|sp|Q7VGF9|KTHY_HELHP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|32262913|gb|AAP77959.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449]
          Length = 195

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 19/211 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---SCGVDE 61
           ++++ EG++  GK+T I LLK +  +       T+EPGG+   E  R ++L         
Sbjct: 1   MYVAIEGVDTCGKSTQIQLLKAYYPQ----AVFTKEPGGSIIGEHIRDLVLFAPKKYGFT 56

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++F A R  H   V+ P   + K+++ DR + S  AY    D +Q +   +L 
Sbjct: 57  LDERAELMLFLADRAQHYAQVLLPH--KDKLIISDRSVISGIAYAKSIDIAQSI---ALN 111

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  ++ ++PD  +IL+L      +R+       ES   D  E + +    + ++ F ++ 
Sbjct: 112 DFVLRGMLPDLVVILELDEKSLKERI-------ESKSHDNIESRGISYMLEIQKCFKNVV 164

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                +  ++D+    + +   I   +  LV
Sbjct: 165 TQMNLKYIVLDATQDKERICAQIREHINILV 195


>gi|238019601|ref|ZP_04600027.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748]
 gi|237863799|gb|EEP65089.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748]
          Length = 228

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 80/229 (34%), Gaps = 23/229 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+      V
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116
            +      + ++A  R              G I++ DR+  S+  +Q  +      +  F
Sbjct: 62  HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDLKERTAF 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L++          PD   +LD+P+++    +  R         D  E  +       
Sbjct: 122 LDWLEDFEFNKFGLPTPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHQYLVAV 180

Query: 174 RQIFLDIARNQPDRCHIV------DSAH----SFQSVATNILNIVWELV 212
              + ++ +      H +      +++     + + +  ++   V  L+
Sbjct: 181 HDAYEELVKRYG--WHRIPCATKDNASQYALRTIEEIHNDVYQAVVNLL 227


>gi|145334853|ref|NP_001078772.1| ZEU1 (ZEUS1); ATP binding / thymidylate kinase [Arabidopsis
           thaliana]
 gi|332009807|gb|AED97190.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
          Length = 271

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK+T  + L  FL    +   + R P    +        LS    + 
Sbjct: 66  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 124

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  + 
Sbjct: 125 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 179

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD  + LD+  +   +R             + +ER  V   +K    +  +  
Sbjct: 180 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 229

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +      I++++ + + V   I  +V + V++
Sbjct: 230 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 258


>gi|21553651|gb|AAM62744.1| thymidylate kinase-like protein [Arabidopsis thaliana]
          Length = 263

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK+T  + L  FL    +   + R P    +        LS    + 
Sbjct: 58  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 116

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  + 
Sbjct: 117 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 171

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD  + LD+  +   +R             + +ER  V   +K    +  +  
Sbjct: 172 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 221

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +      I++++ + + V   I  +V + V++
Sbjct: 222 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 250


>gi|189490439|ref|YP_001957008.1| thymidylate kinase [Pseudomonas phage 201phi2-1]
 gi|164609504|gb|ABY63113.1| thymidylate kinase [Pseudomonas phage 201phi2-1]
          Length = 357

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 17/228 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCGVDE 61
           FI  +G + +GK+T +      ++ +  D    REPGG P     AE  R  L++   + 
Sbjct: 7   FIVLDGPDFSGKSTLMKAFLARVEAEGIDHVAMREPGGIPGSGSLAEEIRVALIANRDER 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSL 120
              E + ++  A R+ +V+++I PAL + K ++ DRF+ S++    +     H +L D L
Sbjct: 67  VHPETDVLLHMAYRVQNVKDIILPALADNKWVISDRFVFSTWCLNVQAHLETHPYLTDML 126

Query: 121 QEIS----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             +          P  T ILD P +I  +R  +     +    D +E +   +H++    
Sbjct: 127 YGLMPYVLQGLPEP-LTFILDTPREIRDQRANS-----DERKKDRYESQPAAVHDRIEAA 180

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           +  + R+ P  C  +D     +     +   +    ++ +  ++  ++
Sbjct: 181 YEQL-RSSPS-CKFIDGTLPIEEQVDIMFAYIKGFKEQVLGQMAEAEE 226


>gi|160902557|ref|YP_001568138.1| thymidylate kinase [Petrotoga mobilis SJ95]
 gi|160360201|gb|ABX31815.1| thymidylate kinase [Petrotoga mobilis SJ95]
          Length = 232

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 19/228 (8%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57
           M  G+ I  E G + +GK T   +L + L+ +    +    P     + A   + L    
Sbjct: 1   MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEF 60

Query: 58  --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS 112
               +     A +  FA  R    +  ++P    G IL+ DR+  S+  YQ  +    S 
Sbjct: 61  GENPEAINPYAASTFFAVDRFATYQKELKPLYESGGILISDRYTTSNMIYQSSKFENQSE 120

Query: 113 QHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +  FL+ L ++   +     P+  I LD+P  I ++ ++ R              K++  
Sbjct: 121 KDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRKRKEKIIDLTGKDIHEKNIEY 180

Query: 170 HEKRRQIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWEL 211
             K  +    IA+       I++         S + +   I +I  ++
Sbjct: 181 INKTYENAKYIAQKY--NWTIINCLKENEELKSIEEIHEEIYSIWKQI 226


>gi|166713902|ref|ZP_02245109.1| thymidylate kinase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 227

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 39/233 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+       +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLEAAGARFVLSKEPTNGPWGTKLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG         L+ L  
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLE-LNA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + R IF  +    P + H+VD++    SV      I+   +  R+S   +  D
Sbjct: 163 RCRTIFAGL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGATAD 212


>gi|152992943|ref|YP_001358664.1| thymidylate kinase [Sulfurovum sp. NBC37-1]
 gi|254808312|sp|A6Q9Z8|KTHY_SULNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|151424804|dbj|BAF72307.1| thymidylate kinase [Sulfurovum sp. NBC37-1]
          Length = 191

 Score =  147 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+  GK+T + LL +    K+  +  T EPGGT   + AR +LLS  +     
Sbjct: 1   MYILFEGIDTCGKSTQMELLTQ----KHPGIITTHEPGGTAFGQQAREILLSDSLR--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H E V+ P     KI++ DR   S   Y           L +L   +
Sbjct: 55  RAELLLFLADRAEHYEEVVEP--NHDKIVVSDRGFVSGIGYALANGDFDFDELVALNRFA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +++  PD  I+    ++   +R+  +        LD  E + +    + ++   +     
Sbjct: 113 LKDHFPDRIILFMTDMETLKQRISEK-------ELDGIELRGLEYLLRVQEHMKESILKL 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209
                 +D+  S +++  +IL  + 
Sbjct: 166 GIPHLFIDATDSIENIHQSILTYLK 190


>gi|30697225|ref|NP_851222.1| ZEU1 (ZEUS1); ATP binding / thymidylate kinase [Arabidopsis
           thaliana]
 gi|110741098|dbj|BAE98643.1| thymidylate kinase - like protein [Arabidopsis thaliana]
 gi|332009806|gb|AED97189.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
          Length = 263

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK+T  + L  FL    +   + R P    +        LS    + 
Sbjct: 58  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 116

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  + 
Sbjct: 117 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 171

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD  + LD+  +   +R             + +ER  V   +K    +  +  
Sbjct: 172 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 221

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +      I++++ + + V   I  +V + V++
Sbjct: 222 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 250


>gi|256372673|ref|YP_003110497.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256009257|gb|ACU54824.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 194

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
             +G +  GK+T + L    ++ +  DV   R+PGG PAAEA R V+           AE
Sbjct: 2   VLDGPDKVGKSTQVHLAVAAVRARGVDVVTARDPGGDPAAEALREVVK---TRSLAPWAE 58

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEISVQ 126
            + FAAAR   V  V+RPA+  G  ++ DR+  S+  YQG +     ++ L++L      
Sbjct: 59  LLTFAAARAQLVATVVRPAVEAGTHVILDRYFPSTIVYQGPKVGEDAIWALEAL----TG 114

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
           + + D  ++LD            R         D FE       E+ R  + D AR+   
Sbjct: 115 DPVADLVLVLD------------RAEPLGLDAGDRFEAGGRSAWEQIRARYADRARSWG- 161

Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212
              +VD+  S  +VA  +  ++   +
Sbjct: 162 -WRLVDANGSRDAVAARVQAMIMAEL 186


>gi|255527280|ref|ZP_05394160.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|296188361|ref|ZP_06856753.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7]
 gi|255509018|gb|EET85378.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|296047487|gb|EFG86929.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7]
          Length = 241

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 13/225 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           MN G+ I  EG +G+GK T   +L   L  +NY V     P     + A   + L+    
Sbjct: 1   MNRGIVIVVEGCDGSGKATQTQILYEKLLSENYKVKKIEYPNYKSDSSALVKMYLNGDFG 60

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQ 113
              ++      +  +A  R    +   +     G I+L DR+  ++  +Q  +      +
Sbjct: 61  SNPEDVNPYVSSTFYAVDRFASYKTEWKDFYESGGIVLADRYTTANMVHQASKIKNVQEK 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FLD L +         +PDC + LD+P +   K ++ R +            KD    
Sbjct: 121 SKFLDWLWDFEFRIFGLPVPDCVMFLDMPPEYSRKLMKERANKITGDSHKDIHEKDYEYL 180

Query: 171 EKRRQIFLDIARNQP-DRCHIV-DSA-HSFQSVATNILNIVWELV 212
           E       +IA     +R   V +    S + ++  + NIV + +
Sbjct: 181 EHSYNNSCEIAEKYKWNRVKCVKEGNIKSIELISEEVFNIVKKQL 225


>gi|55742029|ref|NP_001006834.1| thymidylate kinase [Xenopus (Silurana) tropicalis]
 gi|49899892|gb|AAH76907.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana)
           tropicalis]
 gi|89266991|emb|CAJ81735.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana)
           tropicalis]
          Length = 216

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG + AGK+T    L   L+ + Y     R P  T          L    +  
Sbjct: 5   RGALIVLEGADRAGKSTQARRLVEALKERGYKTEGLRFPERTTEIGRLIGSYLEKKSN-L 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R + V  +I+  L  G  L+ DR+  S  A+   +++     L   ++
Sbjct: 64  EDHTIHLLFSANRWEQVP-MIKEKLRSGVTLVIDRYAFSGVAFTSSKENFD---LHWCKQ 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V    PD  + L++  ++   R      + E+              EK  + + ++  
Sbjct: 120 PDVGLPKPDLVLFLNVSPEVAASRGGFGNEIYETNS----------FQEKVSKRYAELME 169

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++     ++D++ + + V   +  +  + ++ 
Sbjct: 170 DKTVNWTLIDASQNIEDVHRQLKELTEKAIED 201


>gi|289666405|ref|ZP_06487986.1| thymidylate kinase [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289669267|ref|ZP_06490342.1| thymidylate kinase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 227

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 39/233 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARCLATTLETAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG         L+    
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + R IF  +    P + H+VD++    SV      I+   +  R+S  ++  D
Sbjct: 163 RCRTIFAGL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHAD 212


>gi|258571125|ref|XP_002544366.1| thymidylate kinase [Uncinocarpus reesii 1704]
 gi|237904636|gb|EEP79037.1| thymidylate kinase [Uncinocarpus reesii 1704]
          Length = 212

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 14/220 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ AGK+T  ++L   L+   Y  +  R P  T +        L  G  
Sbjct: 1   MTRGALIVMEGLDRAGKSTQCAVLVDKLREMGYKTNYIRFPDRTTSIGKIIDGYL-RGEV 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A  ++F+A R + + + I   +  G  ++ DR+  S   Y   + +   L LD  
Sbjct: 60  QLEDHAIHLLFSANRWE-LASRIHEDISNGISIVIDRYSYSGAVYSAAKGNKD-LSLDWA 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +    PD    L++  +   +R            L+ +E  +V +  +  ++F  +
Sbjct: 118 WRPEIGLPRPDMWFFLNVSPEEAERR--------GGYGLERYE--NVTLQLRVGKLFKSL 167

Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
              +  +   IVD+  S + VA  I  +    + +   PL
Sbjct: 168 QGMENNEEMRIVDANQSKEEVAQQIFELSSAAIGQIEGPL 207


>gi|300853347|ref|YP_003778331.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528]
 gi|300433462|gb|ADK13229.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528]
          Length = 227

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 33/235 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           +  G  I  EG +G+GK T    L + L  +NY++     P     + A   + L+    
Sbjct: 3   LQKGKLIVIEGCDGSGKATQTEKLYKRLLNENYNLKKIEYPNYNSESSALVRMYLNGDFG 62

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
              ++  A A +  +A  R    +   +     G I+L DR+  ++  +Q  +       
Sbjct: 63  KKPEDVSAYAASTFYAVDRFASYKMEWKKFYENGGIILADRYTTANMIHQASKIDDLEEK 122

Query: 116 --FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL  L            PDC I LD+P +   K +  R +             +  IH
Sbjct: 123 NKFLKWLWNFEFDIFRLPVPDCVIFLDMPPEYSKKLMTKRNNKFTGNA-------EKDIH 175

Query: 171 EKRRQIFLDIARNQPDRCHIVD-----------SA--HSFQSVATNILNIVWELV 212
           E+    +  +  +  +  HIVD            +   +   +  +I +++ +++
Sbjct: 176 ERD---YEYLVNSYKNAIHIVDKYNWNKISCIEGSEIKTVDKIHEDIYDLIKKIL 227


>gi|134109297|ref|XP_776763.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259443|gb|EAL22116.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 217

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG++  GK+T +  L + L+R+ +   + + P  T          L    + 
Sbjct: 5   TRGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPDRTTQIGKMIDAYLQSKTE- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     IR  L  G  ++ DR+  S  A+   +     L  D   
Sbjct: 64  IDDHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFSAAKG----LPFDFCL 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  +PD T+ L LP +   KR         +   + +E   V I +  RQ F  +A
Sbjct: 119 HPDAGLPLPDVTLYLTLPPETAAKR--------SAYGEERYE--SVSIQQAVRQQFKLVA 168

Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQ 213
               +R        +++  +F+ V   I + +  +V+
Sbjct: 169 NEIKNRHGSDKWIEIEADGTFEDVEERIWSQISNVVE 205


>gi|268611868|ref|ZP_06145595.1| putative thymidylate kinase [Ruminococcus flavefaciens FD-1]
          Length = 224

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 18/227 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58
            G  I  EG++G+GK T  +LL   L+    +      P     +     + L       
Sbjct: 2   KGKLIVIEGLDGSGKATQTALLCEKLKTLGVEFDHFSFPDYNSESSLLVRMYLDGKFGDN 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116
             E    A +  FA  R        +     G I++CDR+  S+  +Q  +  D     F
Sbjct: 62  AAEVNPYAASCFFACDRYASFRTQWQDKYEGGHIIVCDRYTTSNAVHQCSKLPDGEWDDF 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           ++ L +     +    PD  I L +  +IG + ++ RY+  E    D  E+ D     + 
Sbjct: 122 VNWLFDFEYRKIGLPEPDAVIYLRVDPEIGQELLKKRYNGDEKKK-DIHEK-DEDHLNRS 179

Query: 174 RQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELVQKR 215
           R      A+      H +     +     Q +A  +   V  +++ +
Sbjct: 180 RLTADHCAKLYG--WHTIECVNENGMRDKQEIAEEVFEAVRSVIKNK 224


>gi|282848946|ref|ZP_06258335.1| dTMP kinase [Veillonella parvula ATCC 17745]
 gi|282581221|gb|EFB86615.1| dTMP kinase [Veillonella parvula ATCC 17745]
          Length = 228

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 23/229 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+      V
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKNV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHLF 116
            +      + ++A  R              G I++ DR+  S+  +Q  +      +  F
Sbjct: 62  HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDNPKERTAF 121

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L++   Q+     PD   +LD+P+++    +  R         D  E  +       
Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHAYLVAV 180

Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212
              + ++ +      H +  A           + + +  ++ ++V  L+
Sbjct: 181 HGAYEELVKRYQ--WHRIPCAYKAKSSQYTLRTIEEIHNDVYSVVENLL 227


>gi|145242644|ref|XP_001393895.1| thymidylate kinase [Aspergillus niger CBS 513.88]
 gi|134078448|emb|CAK40391.1| unnamed protein product [Aspergillus niger]
          Length = 224

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 18/222 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ AGK++    L + LQ   + V   R P   TP  +     L   G  
Sbjct: 9   RRGALIVVEGLDRAGKSSQCESLHQKLQDLGHSVKYIRFPDRTTPIGKLIDGYL--RGQS 66

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    +  ++F+A R + +   I   +  G  ++ DR+  S   Y   + ++  L L+  
Sbjct: 67  QLDDHSIHLLFSANRWE-IARAIEEDIAAGITVIVDRYSYSGAVYSAAK-ANPTLSLEWA 124

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +    PD  + L +  D   KR             + +E + +    + R++F  I
Sbjct: 125 WTPEIGLPQPDLCLFLSIAPDEAAKR--------GGFGAERYENETM--QSRVRELFQTI 174

Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219
            R  +     ++D+  SF++V+ +I   V + + +   + PL
Sbjct: 175 FRVQRSGDIRVIDAGRSFEAVSVDIEKSVVDCIARLDAIGPL 216


>gi|307721020|ref|YP_003892160.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294]
 gi|306979113|gb|ADN09148.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294]
          Length = 191

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 15/204 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I+ LK+   +       T+EPGGT   +  R ++LS        
Sbjct: 1   MYIAIEGIDTAGKSTQIAALKKHFPQ----AVTTKEPGGTEIGKEIREMVLSAKTK--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H++ VI P L   K+++ DR   S  AY   ++      L  L + +
Sbjct: 55  RAEFLLFLADRAEHIKEVIEPNL--HKVIISDRSAVSGVAYALIQEDIDTKDLVYLNDFA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +++ P    +L L  +    R+  +        LD  E +      + ++     +   
Sbjct: 113 TKKIYPKKIFLLRLTKEELEFRLSQK-------ELDGIELRGSEYLLQIQESIKKASELL 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                 +D+      +   IL+ +
Sbjct: 166 GLTLIEIDATKPINEITEEILSNI 189


>gi|160933042|ref|ZP_02080431.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753]
 gi|156868116|gb|EDO61488.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753]
          Length = 222

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 18/226 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG++G+GK T   LL ++L+ +   V     P     + A   + L+    
Sbjct: 1   MARGKLIVMEGLDGSGKATQTGLLCQYLESRGRRVRHIEFPDYREPSSALVKMYLNKEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114
               +  A A +  +A  R        R   + G  ++ DR+  S+  YQ E+      +
Sbjct: 61  SNPGDVNAYAASSFYAVDRYASFLRFWRKDYLSGATIVADRYTTSNAVYQMEKTPREDWN 120

Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +L  LQ+     +Q   PD  + LD+P +I  + +  RY+  E    D  E  +V    
Sbjct: 121 KYLAWLQDYEYGKLQLPRPDLVLFLDMPTEISQRLLSGRYAGDE-RKKDLHES-NVEFLT 178

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHS-----FQSVATNILNIVWELV 212
           + R+    +   +    H V  +        + +  +I  IV + +
Sbjct: 179 RCRRT--ALYAAEAMGWHTVSCSQEGAPRKIEDIQRDIREIVSQKL 222


>gi|294791584|ref|ZP_06756732.1| dTMP kinase [Veillonella sp. 6_1_27]
 gi|294456814|gb|EFG25176.1| dTMP kinase [Veillonella sp. 6_1_27]
          Length = 228

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 23/229 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+      V
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116
            +      + ++A  R              G I++ DR+  S+  +Q  +         F
Sbjct: 62  HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDPKERTAF 121

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L++   Q+     PD   +LD+P+++    +  R         D  E  +       
Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHAYLVAV 180

Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212
              + ++ +      H +  A           + + +  ++ ++V  L+
Sbjct: 181 HGAYEELVKRYQ--WHRIPCADKAKSSQYTLRTIEEIHNDVYSVVENLL 227


>gi|30697228|ref|NP_568907.2| ZEU1 (ZEUS1); ATP binding / thymidylate kinase [Arabidopsis
           thaliana]
 gi|332009805|gb|AED97188.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana]
          Length = 224

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK+T  + L  FL    +   + R P    +        LS    + 
Sbjct: 19  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 77

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  + 
Sbjct: 78  DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD  + LD+  +   +R             + +ER  V   +K    +  +  
Sbjct: 133 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +      I++++ + + V   I  +V + V++
Sbjct: 183 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 211


>gi|153940357|ref|YP_001389419.1| putative thymidylate kinase [Clostridium botulinum F str.
           Langeland]
 gi|152936253|gb|ABS41751.1| putative thymidylate kinase [Clostridium botulinum F str.
           Langeland]
 gi|295317529|gb|ADF97906.1| putative thymidylate kinase [Clostridium botulinum F str. 230613]
          Length = 231

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MQRGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +      +
Sbjct: 61  RDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKSLMKTRNNKFTG------EKEK-DIH 173

Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+       I+       + ++        S   +  +I+ I+ + +
Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225


>gi|225452175|ref|XP_002264926.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296090257|emb|CBI40076.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 84/212 (39%), Gaps = 19/212 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I  EG++ +GK++  S +  +L+       + R P  +          L+   D 
Sbjct: 49  SRGALIVLEGLDRSGKSSQSSRMMSYLEGLGVSAELWRFPDRSTCVGQMISSYLANKSD- 107

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  +
Sbjct: 108 LDDHTIHLLFSANRWE-KRSLMETKLRTGTTLIVDRYSYSGVAFSSAKG----LDIEWCK 162

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +  + PD  + L++P +   +R             + +E+  +    K    +  + 
Sbjct: 163 APEMGLLAPDLVVYLNIPPEKAAER--------GGYGGERYEQ--LDFQRKVAHHYQVL- 211

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              P    I+D++   + V   + ++V + V+
Sbjct: 212 -RDPS-WKIIDASLPIEDVEKPLRDMVLDCVK 241


>gi|91763270|ref|ZP_01265234.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717683|gb|EAS84334.1| Thymidylate kinase  (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 203

 Score =  145 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+    I FEGIEG GK+ HI  +  +L RK       REPGG+  +E  R+++L+    
Sbjct: 1   MSKKPIIVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSRNSEKIRNLILNNKST 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F  E + +++ +AR +++  +IR  + + KI+L DRF DS+ AYQ         F+ ++
Sbjct: 61  -FNKETDLLLYLSARSENM-EIIRKNVGK-KIILIDRFSDSTIAYQHYGMGVNLKFIQNI 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               ++ +  D T +      + L  ++ R  LR+      +++ +   +EK +  F+ I
Sbjct: 118 NNHLLKNIKIDFTFL----NTVNLSNMKKRLKLRKKLNR--YDKFNSKFYEKVQNGFIKI 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  P +   ++S          ILN + +L+
Sbjct: 172 LKKNPKKYIRINSNLDIDLNENIILNKIKDLI 203


>gi|28209987|ref|NP_780931.1| thymidylate kinase [Clostridium tetani E88]
 gi|28202422|gb|AAO34868.1| thymidylate kinase [Clostridium tetani E88]
          Length = 228

 Score =  145 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 85/230 (36%), Gaps = 29/230 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57
             G  I  E  +G+GK T    L   L    YDV     P     + A   + LS     
Sbjct: 4   KKGKLIVIEAPDGSGKATQTKKLYNKLVEDKYDVLKVEYPDYNSNSSALIKMYLSGEFGD 63

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQH 114
             ++  A A +  FA  R    +         G I+L DR+  S+  +Q  +      + 
Sbjct: 64  KPNDVNAYAASTFFAVDRFASFKKKWGAFYENGGIILADRYTTSNMVHQASKIKNVEEKK 123

Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FLD L ++    +   +PD TI LDLP +     ++NR +            ++  IHE
Sbjct: 124 KFLDWLWDLEFNLMGLPIPDATIFLDLPPEYSRNLIKNRKNKFTGE-------EEKDIHE 176

Query: 172 KRRQIFLDIAR------NQPDRCHIVDS-----AHSFQSVATNILNIVWE 210
           +  + +L+I+        +      ++        +   +   I  ++ E
Sbjct: 177 RD-EDYLNISYKNAVDIAEKYNWIKINCIKGDKIKNINEIHEEIYKVLKE 225


>gi|77407435|ref|ZP_00784304.1| thymidylate kinase [Streptococcus agalactiae H36B]
 gi|77173956|gb|EAO76956.1| thymidylate kinase [Streptococcus agalactiae H36B]
          Length = 117

 Score =  145 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GL ISFEG +GAGKTT +  +   L+ K + D+  TREPGG   +E  RH++L    
Sbjct: 1   MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            +   + E +++ AAR  H+   + PAL E +I+L DRF+DSS AYQG      
Sbjct: 61  TQMDKKTELLLYMAARRQHLVEKVLPALEEREIVLMDRFIDSSVAYQGSGRGLD 114


>gi|71083690|ref|YP_266410.1| thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062803|gb|AAZ21806.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 203

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 9/212 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+    I FEGIEG GK+ HI  +  +L RK       REPGG+  +E  R+++L+    
Sbjct: 1   MSKKPIIVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSANSEKIRNLILNNKST 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F  E + +++ +AR +++  +IR  + + KI+L DRF DS+ AYQ         F+ ++
Sbjct: 61  -FNKETDLLLYLSARSENI-EIIRKNVGK-KIILIDRFSDSTIAYQHYGMGVNLKFIQNI 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               ++ +  D T +      + L  ++ R  LR+      +++ +   +EK +  F+ I
Sbjct: 118 NNHLLKNIKIDFTFL----NTVNLSNMKKRLKLRKKLNR--YDKFNSKFYEKVQNGFIKI 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  P +   ++S          ILN + +L+
Sbjct: 172 LKKNPKKYIRINSNLDIDLNENIILNKIKDLI 203


>gi|254457836|ref|ZP_05071263.1| thymidylate kinase [Campylobacterales bacterium GD 1]
 gi|207085229|gb|EDZ62514.1| thymidylate kinase [Campylobacterales bacterium GD 1]
          Length = 190

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 15/205 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I  LK        D  +T+EPG T   +  R ++LS        
Sbjct: 1   MYIAIEGIDTAGKSTQIQKLKENFP----DAIITKEPGATAIGKEIREIVLSAKAQ--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R +H++ V+ P L   K+++ DR   S  AY   +       +  L   +
Sbjct: 55  KAEFLLFLADRAEHIKEVVEPNLD--KMIISDRSAVSGVAYALIQGEISETAIVHLNRFA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P    +L L  +    R+  +        LD  E +        +   +      
Sbjct: 113 TGGIYPQKVFLLKLTKEELEYRLSQK-------ELDGIELRGSEYLLSIQDAIIKATELL 165

Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209
                 +D+ +S + +   IL  + 
Sbjct: 166 NLELVTIDATNSIEDITKEILKNIE 190


>gi|91203291|emb|CAJ72930.1| similar to thymidylate kinase [Candidatus Kuenenia stuttgartiensis]
          Length = 234

 Score =  145 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 18/226 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS--CG 58
            G  I   GI+G+GKT    LL   L ++ Y V     P  G T  AE     L      
Sbjct: 10  QGKLIVITGIDGSGKTVQTKLLYERLLKEGYPVATIDFPQYGKTFFAEMVAKYLRGSFGA 69

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER------DSS 112
            D       +I++A  R +  ++ I+  +  GKI++ +R++  + A+QG +       + 
Sbjct: 70  ADAVSPYLASILYAGDRFE-KKDQIQTWIDAGKIIISNRYVCDNMAHQGGKIKNSEERAQ 128

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
              +LD L+        P  +I+L +P +I    V+ +      A       ++ M H K
Sbjct: 129 FFQWLDQLEHTVFGIPRPHLSILLYVPAEIAYFLVEKKGQREYLAGAKKDIHEEDMHHMK 188

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHS----FQSVATN-ILNIVWELV 212
             ++ F++IA+ +P+    VD   +     + V  + I   V +++
Sbjct: 189 SAQETFIEIAKGKPN-WKTVDCTKNNTLLPEHVIADTIWQAVAKIL 233


>gi|301305668|ref|ZP_07211757.1| thymidylate kinase [Escherichia coli MS 124-1]
 gi|300839096|gb|EFK66856.1| thymidylate kinase [Escherichia coli MS 124-1]
          Length = 134

 Score =  145 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 5/134 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56
           M S  +I  EG+EGAGKTT  +++   L++    D+  TREPGGT  AE  R ++L    
Sbjct: 1   MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G +    +AE ++F AAR+  VE VI+PAL  G  ++ DR   S+ AYQG         
Sbjct: 60  VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119

Query: 117 LDSLQEISVQEVMP 130
           L +L++  + +  P
Sbjct: 120 LATLRDAVLGDFRP 133


>gi|50303763|ref|XP_451827.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640959|emb|CAH02220.1| KLLA0B06556p [Kluyveromyces lactis]
          Length = 208

 Score =  145 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 86/221 (38%), Gaps = 20/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GK+T    +   L     D  + + P  T       +  L+    
Sbjct: 1   MVRGKLILIEGLDRTGKSTQCENVVNAL---GNDAVLIKFPDRTTKIGQLINQYLTDKDF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  A++  ++F+A R + ++  I   L  GK ++ DR++ S  AY   +   Q + +   
Sbjct: 58  ELPAQSIHLLFSANRWE-LKEEIHSMLKAGKHVVLDRYVYSGVAYSAAK-GIQGMDISWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD T+              +    RE    + +E+  V    + R  F ++
Sbjct: 116 FNPDKGLLKPDLTLFFS---------NSSNMRDREGFGEERYEK--VEFQRQVRDTFFNV 164

Query: 181 ARN--QPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVSP 218
                  +R  ++D S  S   V + I  ++ +++ K +  
Sbjct: 165 FDQIKDSNRI-VIDVSDKSIDEVFSEIKPLIHDVINKELGE 204


>gi|294793438|ref|ZP_06758575.1| dTMP kinase [Veillonella sp. 3_1_44]
 gi|294455008|gb|EFG23380.1| dTMP kinase [Veillonella sp. 3_1_44]
          Length = 228

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 23/229 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+      V
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYNSGAAMPIKMYLAGEFGKDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116
            +      + ++A  R              G I++ DR+  S+  +Q  +      +  F
Sbjct: 62  HDVNPYVASSMYAIDRFASFRTDWEQFYNNGGIIIADRYTTSNMVHQMVKYDDLKERTAF 121

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L++   Q+     PD   +LD+P+++    +  R         D  E  +       
Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEVLMAERTGKTGGNTGDIHEG-NHAYLVAV 180

Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212
              + ++ +      H +  A           + + +  ++  +V  L+
Sbjct: 181 HDAYEELVKRYQ--WHRIPCADKAKSSQYTLRTIEEIHNDVYGVVENLL 227


>gi|58265708|ref|XP_570010.1| thymidylate kinase [Cryptococcus neoformans var. neoformans JEC21]
 gi|57226242|gb|AAW42703.1| thymidylate kinase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 217

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG++  GK+T +  L + L+R+ +   + + P  T          L    + 
Sbjct: 5   TRGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPERTTQIGKMIDAYLQSKTE- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     IR  L  G  ++ DR+  S  A+   +     L  D   
Sbjct: 64  IDDHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFSAAKG----LPFDFCL 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  +PD T+ L LP +   KR         +   + +E   V I +  RQ F  +A
Sbjct: 119 HPDAGLPLPDVTLYLTLPPETAAKR--------SAYGEERYE--SVSIQQAVRQQFKLVA 168

Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQ 213
                R        +++  +F+ V   I + + ++V+
Sbjct: 169 NEIKKRHGADKWIEIEADGTFEDVEERIWSQISDVVE 205


>gi|168185104|ref|ZP_02619768.1| putative thymidylate kinase [Clostridium botulinum Bf]
 gi|237793368|ref|YP_002860920.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657]
 gi|182671852|gb|EDT83813.1| putative thymidylate kinase [Clostridium botulinum Bf]
 gi|229263044|gb|ACQ54077.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657]
          Length = 231

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQAKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +      +
Sbjct: 61  KDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 121 DNFLNWLWDFEFKKFNLPVPDCVIFLDMPPKFSKSLMKTRNNKFTG------EKEK-DIH 173

Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+       I+       + ++        S   +  +I+ I+ + +
Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225


>gi|297793501|ref|XP_002864635.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310470|gb|EFH40894.1| thymidylate kinase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 263

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 87/220 (39%), Gaps = 21/220 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK+T  + L  FL+   +   + R P    +        LS    + 
Sbjct: 58  RGALIVLEGLDRSGKSTQCAKLLSFLEGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 116

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L +D  + 
Sbjct: 117 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LNIDWCKA 171

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD  + LD+  +   +R             + +ER  V   +K    +  +  
Sbjct: 172 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLRD 221

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLS 220
           +      I+++  + + V   I  +  + V++  +  PLS
Sbjct: 222 SS---WKIINAGEAMEEVEKKIQEVALDKVKECTKGKPLS 258


>gi|124005922|ref|ZP_01690760.1| thymidylate kinase [Microscilla marina ATCC 23134]
 gi|123988605|gb|EAY28246.1| thymidylate kinase [Microscilla marina ATCC 23134]
          Length = 232

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 26/233 (11%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS- 56
           M     FI  EG++G+GK+T + L+   LQ           P  G     +     L   
Sbjct: 1   MTKPNKFIVIEGLDGSGKSTQLKLITAHLQNAGIKYQHIHFPVMGEGYYGQLTAEFLRGD 60

Query: 57  -CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------- 108
              +D+   +  A++FA  R++H+E  I   L +G +++ DR+++S+ A+Q         
Sbjct: 61  LGALDQVHPKIAALIFAGNRVEHLEQ-INQWLADGYVVIADRYVNSNIAFQCAKFDNQTE 119

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFER 164
           +D+ +   L+   E ++    P  ++ LD+P     K + N+    + A L    D  E 
Sbjct: 120 KDTLKKWILEFEYEFNL-LPRPASSLFLDVPFASIKKSLTNQREGDDRAYLQGKSDIHED 178

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSA------HSFQSVATNILNIVWEL 211
             + + EK RQ +L + + QPD  H++  +         + +   I     +L
Sbjct: 179 -SLDLQEKVRQEYLQMVKEQPD-FHLIKCSDEKGNYLPPEQIHAEIKARFDQL 229


>gi|213969786|ref|ZP_03397921.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1]
 gi|301382862|ref|ZP_07231280.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13]
 gi|302062832|ref|ZP_07254373.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40]
 gi|302131340|ref|ZP_07257330.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213925594|gb|EEB59154.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1]
          Length = 119

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 46/101 (45%), Positives = 66/101 (65%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GLFI+ EG EGAGK+T+   L   L+ +   V +TREPGGTP AE  R +LL+   +  
Sbjct: 2   TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
            A+ E ++  AAR  H+  VIRPAL  G+++LCDRF ++ +
Sbjct: 62  SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTNNLF 102


>gi|160945247|ref|ZP_02092473.1| hypothetical protein FAEPRAM212_02766 [Faecalibacterium prausnitzii
           M21/2]
 gi|158442978|gb|EDP19983.1| hypothetical protein FAEPRAM212_02766 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105536|emb|CBL03080.1| thymidylate kinase [Faecalibacterium prausnitzii SL3/3]
          Length = 223

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 84/233 (36%), Gaps = 32/233 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M+ G  I  EG++G+GK T   LL   L  +   V     P     + A   + L+    
Sbjct: 1   MSKGKLIVLEGLDGSGKATQAKLLAEHLAAQGVPVQKITFPDYASDSSALVKMYLAGQFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D+  A A +  +A  R    +        +G +++ DR+  S+  +Q  +   Q  +
Sbjct: 61  QHPDDVNAYAASSFYAVDRYASYKTSWGSFYEQGGVIIADRYTTSNAVHQCSK-LPQEQW 119

Query: 117 LDSLQEIS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            + L  +       +    PD  I L +   +  + +  RY   ES            +H
Sbjct: 120 EEYLHWLFDYEFRLLGLPAPDRVIYLQVDPAVSQRLMTQRYHGDESKK---------DVH 170

Query: 171 EKRRQIFLDIARNQPDRCHI------V-----DSAHSFQSVATNILNIVWELV 212
           EK    +L  +R   + C        V     D+  S + +   +  +  + +
Sbjct: 171 EKD-TAYLARSRAAAEFCARHLGWDTVHCTSGDAMRSIEEIQQEVQQLARKTL 222


>gi|170761117|ref|YP_001785385.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169408106|gb|ACA56517.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 231

 Score =  144 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 87/234 (37%), Gaps = 31/234 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +        +G I++ DR+  S+  +Q  +      +
Sbjct: 61  MDPDSVNPYASSTFYAVDRFASYKKDWEEFYQKGGIIIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKSLMKTRNNKFTG------EKEK-DIH 173

Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+       I+       + V+        S   +  +I+ I+ + +
Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRVECTNKDKIKSIDQINDDIIKIITQYI 225


>gi|78049663|ref|YP_365838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123583913|sp|Q3BN25|KTHY_XANC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|78038093|emb|CAJ25838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 226

 Score =  144 bits (365), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 39/226 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L      V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG         L+    
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + R IF  +  + P + H+VD++    SV      I+   +  R+S
Sbjct: 163 RCRTIFAAL--DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205


>gi|283954334|ref|ZP_06371855.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794133|gb|EFC32881.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414]
          Length = 191

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEGI+  GK+T ISLLK+  +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYIVFEGIDCVGKSTQISLLKKIYK----DAVFTLEPGGTELGKHLREILLN-KTYPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A R  H E V++    + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RTELLLFLADRAQHFEEVLKD--NQNKLIISDRSFISGMAYAKDF---ENDLLFTLNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +    P   I L     +  +R+  +        LD  E++ +      +     I +  
Sbjct: 111 LDNFFPQKVIFLKGDEKLIKERLNQK-------ELDNIEKRGIEYFLSVQDKLEKILKFL 163

Query: 185 PDRCHI----VDSAHSFQSVATNILNIV 208
            ++  I    +D+  S +++   I   +
Sbjct: 164 KEKISIEILTLDAKESKENLHQQIKEFL 191


>gi|288559843|ref|YP_003423329.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1]
 gi|288542553|gb|ADC46437.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1]
          Length = 196

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 22/208 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFG 63
           ++I  EGI+GAGK+T I+ LK +L+   + V    EP         R +L  S    +  
Sbjct: 1   MYIVLEGIDGAGKSTQINYLKGWLEDNGFKVETIVEPTDLEVGNLIRQLLTRSDATSDTM 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   ++FAA RL  ++  I     E  +++ DR   SS  YQ         ++  + + 
Sbjct: 61  QKTLGLLFAADRLVLMDK-IEKLESERTVVISDRSFYSSLVYQ-----KPQDWIREINKF 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +             +P  + L  +  + S+      D FE +        ++ +L ++R 
Sbjct: 115 AK------------IPDLVLLLDLDVKKSVERCDGTDEFENE--EFLTGVKENYLALSRE 160

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
             D   I+D+ +    VA++I   V  L
Sbjct: 161 N-DNFKIIDANNGPNKVASDIKKAVAPL 187


>gi|313113917|ref|ZP_07799475.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310623756|gb|EFQ07153.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 223

 Score =  144 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 30/232 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M+ G  I  EG++G+GK T   LL   L+ + + V     P     + A   + L+    
Sbjct: 1   MSKGKLIVLEGLDGSGKATQAKLLAAHLKEQGFSVREITFPNYESDSSALVKMYLAGQFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
              D+  A A +  +A  R    +         G I++ DR+  S+  +Q  +   +   
Sbjct: 61  QHPDDVNAYAASSFYAVDRYASYKKDWGSFYENGGIIIADRYTTSNAVHQCSKLPPEQWE 120

Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FL  L +     +    PD  I L +   +  K +  RY   ES            +HE
Sbjct: 121 SFLGWLFDFEFHLLGLPAPDEVIYLQVDPAVSQKLMTQRYHGDESRK---------DVHE 171

Query: 172 KRRQIFLDIARNQPDR------CHIV-----DSAHSFQSVATNILNIVWELV 212
           K  + +L  +R   +         +V     D+  S + +   +  IV + +
Sbjct: 172 KDTE-YLARSRCAAEYCAAHLGWAVVHCTSGDNMRSIEDIQAEVQEIVLKQL 222


>gi|325928260|ref|ZP_08189463.1| thymidylate kinase [Xanthomonas perforans 91-118]
 gi|325541350|gb|EGD12889.1| thymidylate kinase [Xanthomonas perforans 91-118]
          Length = 226

 Score =  144 bits (364), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 39/226 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L      V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            AE EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG         L+    
Sbjct: 65  SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + R IF  +  + P + H+VD++    SV      I+   +  R+S
Sbjct: 163 RCRTIFAAL--DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205


>gi|209882114|ref|XP_002142494.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
 gi|209558100|gb|EEA08145.1| thymidylate kinase family protein [Cryptosporidium muris RN66]
          Length = 208

 Score =  144 bits (364), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 79/214 (36%), Gaps = 17/214 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG + +GKT   + L    + +N +  +   P  +        + L    +
Sbjct: 1   MRRGALIVFEGTDRSGKTLQSNKLAEKFKNENINCILIGFPDRSTNIGYLLDLYL-RNCE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E   ++F+A R ++ E  I+  L  G  ++CDR+  S  AY      +    ++  
Sbjct: 60  NMRPEVSHLLFSANRWEYFEK-IKTYLESGVTVICDRYAFSGVAYSV---GALKKDIEWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD    LD  V I   RV      R     + ++ +          I+   
Sbjct: 116 MMPEKGLISPDIVFFLDADVQI---RV-----DRSGFGDERYDTEST--QNSVSTIYSQF 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +   D   ++D++     V  NI N   + + K
Sbjct: 166 KKY--DYWKVIDASKDPNDVFENIYNFAKQALCK 197


>gi|321254063|ref|XP_003192951.1| thymidylate kinase [Cryptococcus gattii WM276]
 gi|317459420|gb|ADV21164.1| thymidylate kinase, putative [Cryptococcus gattii WM276]
          Length = 217

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 21/217 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG++  GK+T +  L + L+R+     + + P  T          L    + 
Sbjct: 5   TRGAFIVFEGLDRCGKSTQVDHLVQRLERQGRRARLQKFPDRTTQIGKMIDAYLQSKTE- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     IR  L  G  ++ DR+  S  A+   +     L  D   
Sbjct: 64  IDDHAIHLLFSANRWE-CSAAIRRDLASGITVIADRYAFSGIAFSAAKG----LCFDFCL 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +      +PD T+ L LP +   +R         +   + +E   V I +  RQ F  +A
Sbjct: 119 QPDAGLPLPDATLYLTLPPETAARR--------SAYGEERYE--SVSIQQAVRQQFKLVA 168

Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQ 213
                R        +D+  +   V   + + + ++V+
Sbjct: 169 NEIKKRHGADKWIEIDADGTITDVKERVWSQISDVVE 205


>gi|328867446|gb|EGG15828.1| thymidylate kinase [Dictyostelium fasciculatum]
          Length = 214

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 21/220 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  GLFI FEG +  GK+T +  L  +L+     D  V R P  T    +  +  L    
Sbjct: 8   MKRGLFILFEGADRVGKSTQVQKLGDYLKNGLQLDAKVLRFPDRTTPTGSIINGYL-QNT 66

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A  +++AA R +  +N+++  L  G  ++ DR+  S  AY   +     + +D 
Sbjct: 67  TQLDDRAIHLLYAANRWEAKDNLMK-LLNSGTSIVVDRYSYSGVAYTAAKG----IDVDW 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     PD  I L +  +          +LR     + +E+  V    K +QI+  
Sbjct: 122 CFNCEKGLPEPDLVIYLKMTTEDA--------TLRGEYGTERYEK--VDFQNKIKQIYEQ 171

Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
            + +  P    ++++     +V+  I NI+   + + +  
Sbjct: 172 HLIK--PS-WKVINANRDIDTVSNEINNIIKTEINQLIDK 208


>gi|85057562|ref|YP_456478.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789667|gb|ABC65399.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 209

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 9/209 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT  I  +K  L+++  +V V R  G +   E+ R   L+   ++   
Sbjct: 2   KLIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLT--HNKLHN 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +  A  +   E +I+P L   KI+L DR+L S++AY+   +     +      ++
Sbjct: 60  LTRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKY-YFFNNLT 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P+ T+ L +    GL R  N+ +      LD  E   +    +  + F +    +
Sbjct: 119 KLFIKPNLTVYLKIDPQTGLNRKANQTNH----TLDVIETSPLSYFYQVEKGFQEFLNKK 174

Query: 185 PDRCHIVDSA--HSFQSVATNILNIVWEL 211
                I+++    +++S    I+  + E+
Sbjct: 175 LGPQIILNAMEPKTWKSNTKQIIKKIGEI 203


>gi|39939174|ref|NP_950940.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|39722283|dbj|BAD04773.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 209

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 9/209 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT  I  +K  L+++  +V V R  G +   E+ R   L+   ++   
Sbjct: 2   KLIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLT--HNKLHN 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +  A  +   E +I+P L   KI+L DR+L S++AY+   +     +      ++
Sbjct: 60  LTRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKY-YFFNNLT 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P+ T+ L +    GL R  N+ +      LD  E   +    +  + F +    +
Sbjct: 119 KLFIKPNLTVYLKIDPQTGLNRKANQTNH----TLDVIETSPLSYFYQVEKGFQEFLNKK 174

Query: 185 PDRCHIVDSA--HSFQSVATNILNIVWEL 211
                I+++    +++S    I+  + E+
Sbjct: 175 LGPQIILNAMEPKTWKSNTKQIIKKIGEI 203


>gi|67477898|ref|XP_654383.1| Thymidylate kinase [Entamoeba histolytica HM-1:IMSS]
 gi|56471425|gb|EAL48995.1| Thymidylate kinase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 210

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 18/214 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +N GL I  EGI+ +GK++    +   L++K         P  +          L     
Sbjct: 3   INRGLLIVLEGIDQSGKSSATQRVCELLEKKGIQSVKQPFPDRSTDIGKLIDEFLHGKN- 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +   ++++A R + V   I+  L +G  ++CDR+  S   Y       +       
Sbjct: 62  -LPQQVVHLLYSANRWE-VAQNIKETLEKGITVICDRYAFSGIVYSIANGLDE----KWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                    PD    L+L ++   KR       R++   D +E        K +  +   
Sbjct: 116 NSADCGLPKPDIVFFLELSLEDAEKR-------RKTMKTDRYENTK--FQSKVKCEYEKF 166

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 +   +D++ S + VA  I +I+ + + +
Sbjct: 167 --KDSMKWTCIDASQSKEEVALEITSIIEQQLPQ 198


>gi|296449094|ref|ZP_06890884.1| thymidylate kinase [Clostridium difficile NAP08]
 gi|296879917|ref|ZP_06903890.1| thymidylate kinase [Clostridium difficile NAP07]
 gi|296262187|gb|EFH08992.1| thymidylate kinase [Clostridium difficile NAP08]
 gi|296429206|gb|EFH15080.1| thymidylate kinase [Clostridium difficile NAP07]
          Length = 234

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 18/229 (7%)

Query: 1   MN-SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M   G  I  E G + +GK T   +L   L+++ Y +     P     + A   + L   
Sbjct: 4   MKMKGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGD 63

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SS 112
                 +      +  F A R    +        EG I++ DR+  S+  +Q  +     
Sbjct: 64  FGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVCD 123

Query: 113 QHLFLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +  +L+ L   E ++ ++  PDC + LD+P++   K ++NR +             D+  
Sbjct: 124 REKYLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEY 183

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            +K     L IA         ++        S +S+   I  IV + ++
Sbjct: 184 LQKSYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 230


>gi|219669039|ref|YP_002459474.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2]
 gi|219539299|gb|ACL21038.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2]
          Length = 225

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 30/230 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T    L R L  +   V     P  +  + +   + L        
Sbjct: 2   GKLIIIEGGDGSGKATQTRKLWRRLADEGLQVKKVEFPNYSSPSSSLVTMYLGGEFGTDP 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--- 116
           +       +  +A  R    + +       G I+L DR+  S+  +Q  +      +   
Sbjct: 62  NGVNPYTASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGWASY 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDV 167
           LD L++     +    PD  I L++P D+ ++ +  R         D  E      ++  
Sbjct: 122 LDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIQFIAGRADKSSVTSQDIHEKNKGYLKESY 181

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
              +K R           +    +D        S + +   I  +  + +
Sbjct: 182 DNAQKVRVR---------ENWLTIDCVSEGRLKSIEEIHEEIYAVTQKAI 222


>gi|80751137|ref|NP_001032187.1| thymidylate kinase [Danio rerio]
 gi|78070418|gb|AAI07816.1| Zgc:123174 [Danio rerio]
          Length = 212

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 80/211 (37%), Gaps = 15/211 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGKTT    L + +Q+      + R P  T          L    + 
Sbjct: 4   RRGALIVLEGVDRAGKTTQCQKLVQAIQQSGRAAEIMRFPDRTTKIGQLISSYLEKKSN- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V  V++  L EG  L+ DR+  S  A+   +       L+   
Sbjct: 63  LEDHTVHLLFSANRWEMVP-VMKQKLEEGINLVVDRYAFSGVAFTSAK---PGFSLEWCM 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD  + L L  ++   R             + +E          +Q F ++ 
Sbjct: 119 NPDVGLPKPDLVMFLQLNPNVAANR--------GEYGNERYE--TSAFQRTVQQRFEELM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++      ++D+A + + V  +I ++   ++
Sbjct: 169 QDTSINWKVIDAARTIEEVHKDIKDLSENII 199


>gi|157165350|ref|YP_001466858.1| thymidylate kinase [Campylobacter concisus 13826]
 gi|166221732|sp|A7ZDK0|KTHY_CAMC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|112801334|gb|EAT98678.1| thymidylate kinase [Campylobacter concisus 13826]
          Length = 195

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 14/205 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+G GK+T I +L         D  VT+EPGGT      R +LL   + + G 
Sbjct: 1   MYVLFEGIDGVGKSTQIEILASKFS----DAIVTKEPGGTQLGVNLREILLRSSI-KIGK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123
            AE ++F A R +H E ++ P L  GK++L DR   S  AY    D +     L  L + 
Sbjct: 56  RAEILLFLADRAEHFEKLVAPNL--GKLILSDRGFISGIAYALANDENLDENVLLELNKF 113

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++ +   D  I  +   ++   R++ R         D  E + +    K + +   I   
Sbjct: 114 ALNDKFADKIIFFEASRELISSRLKAR------GTSDKIEARGLEYLLKVQSLMKQILIK 167

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
                  +D++ S + ++  I N +
Sbjct: 168 NGFETLFIDASKSIELISKEIENFI 192


>gi|255657498|ref|ZP_05402907.1| putative thymidylate kinase [Clostridium difficile QCD-23m63]
          Length = 229

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 17/226 (7%)

Query: 3   SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58
            G  I  E G + +GK T   +L   L+++ Y +     P     + A   + L      
Sbjct: 2   KGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGDFGK 61

Query: 59  -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHL 115
              +      +  F A R    +        EG I++ DR+  S+  +Q  +     +  
Sbjct: 62  NASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVCDREK 121

Query: 116 FLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +L+ L   E ++ ++  PDC + LD+P++   K ++NR +             D+   +K
Sbjct: 122 YLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEYLQK 181

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
                L IA         ++        S +S+   I  IV + ++
Sbjct: 182 SYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 225


>gi|225683576|gb|EEH21860.1| thymidylate kinase [Paracoccidioides brasiliensis Pb03]
          Length = 224

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 24/223 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T  +LL+  LQR  ++ +  R+    P                
Sbjct: 11  QRGALIVVEGLDRAGKSTQCALLQEALQRGGHENYGDRKTDQCPIWL---------ETHN 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +       +F+A R +  +  I+  +  G  ++ DR+  S   Y   +D    L LD   
Sbjct: 62  WMTIQSIFLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKD-VPGLSLDWAW 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-I 180
           +  +    PD  + L++  +   +R            L+ +E  + ++  + RQ+F   I
Sbjct: 120 QPEIGLPQPDIWLFLNISPEEAARR--------GGYGLERYE--NDILQARVRQLFQTFI 169

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221
            R  P    ++++  S   VA +IL+   + ++K   + PL S
Sbjct: 170 EREDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 212


>gi|315452626|ref|YP_004072896.1| thymidylate kinase [Helicobacter felis ATCC 49179]
 gi|315131678|emb|CBY82306.1| thymidylate kinase [Helicobacter felis ATCC 49179]
          Length = 190

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 20/207 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I FEG++ +GK+T I+LLK    +       + EPGGT   E  R   L      F A
Sbjct: 1   MWIVFEGVDTSGKSTQINLLKPLFPK----AIFSLEPGGTALGEHLRQAALHGA---FCA 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + + ++F A R  H+E VI+P     K++  DR L S  AY       +H +   L    
Sbjct: 54  QTQFLLFLADRALHLEEVIKP--NAHKLIFSDRSLVSGLAYSSY--GLEHAW--ELHRAH 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             +V+PD  ++  L       R+Q +         D  E + V    + ++         
Sbjct: 108 GLDVLPDMVLLFKLNAHTLEMRLQAKN-------PDGIESRGVDFLMRVQERLEQACALL 160

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
             R   ++++ S + V   +L  ++ L
Sbjct: 161 GVRTESINASKSVEEVHKIVLEKIYAL 187


>gi|260685068|ref|YP_003216353.1| putative thymidylate kinase [Clostridium difficile CD196]
 gi|260688726|ref|YP_003219860.1| putative thymidylate kinase [Clostridium difficile R20291]
 gi|260211231|emb|CBA66748.1| putative thymidylate kinase [Clostridium difficile CD196]
 gi|260214743|emb|CBE07430.1| putative thymidylate kinase [Clostridium difficile R20291]
          Length = 234

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 87/229 (37%), Gaps = 18/229 (7%)

Query: 1   MN-SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M   G  I  E G + +GK T   +L   L+++ Y +     P     + A   + L   
Sbjct: 4   MKMKGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGD 63

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSS 112
                 +      +  F A R    +        EG I++ DR+  S+  +Q  +     
Sbjct: 64  FGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDICD 123

Query: 113 QHLFLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +  +L+ L   E ++ ++  PDC I LD+P++   K ++NR +             D+  
Sbjct: 124 REEYLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEY 183

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            EK     L IA         ++        S +S+   I  IV + ++
Sbjct: 184 LEKSYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 230


>gi|89894606|ref|YP_518093.1| hypothetical protein DSY1860 [Desulfitobacterium hafniense Y51]
 gi|89334054|dbj|BAE83649.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 225

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 78/230 (33%), Gaps = 30/230 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T    L + L  +   V     P  +  + +   + L        
Sbjct: 2   GKLIIIEGGDGSGKATQTRKLWQRLADEGLQVKKVEFPNYSSPSSSLVTMYLGGEFGTDP 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--- 116
           +     A +  +A  R    + +       G I+L DR+  S+  +Q  +      +   
Sbjct: 62  NAVNPYAASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGWASY 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDV 167
           LD L++     +    PD  I L++P D+ ++ +  R         D  E      ++  
Sbjct: 122 LDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIRFIAGRADKSSVTSQDIHEKNKGYLKESY 181

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
              +K R           +    +D        S + +   I  +  + +
Sbjct: 182 DNAQKVRVR---------ENWLTIDCVSEGRLKSIEEIHEEIYAVTQKAI 222


>gi|153004942|ref|YP_001379267.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152028515|gb|ABS26283.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 214

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/218 (31%), Positives = 93/218 (42%), Gaps = 19/218 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----S 56
             G FI  EG++GAG TT   LL   L+     VHVT EP G P     R VL       
Sbjct: 7   RRGRFIVLEGLDGAGTTTQARLLGDRLRASGRSVHVTAEPSGGPVGSLVRQVLSRRVVGG 66

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G  E  A A A++FAA RLDHV   I P L  G  ++ DRF  SS AYQG         
Sbjct: 67  RGEGELDAGALALLFAADRLDHVAAEIAPKLAGGVDVVSDRFTLSSLAYQGLTTGD---- 122

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L  ++ I+ +   PD T+ L     + LKR       R +A +D    +         + 
Sbjct: 123 LPWVEAINGRAATPDVTLFLRARPSVALKR-------RRAASIDPELYEVSEFQRAVARS 175

Query: 177 F---LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +   ++  R    R   +D     ++V+  +   V  L
Sbjct: 176 YDRGIERLRAAGQRVVELDGEAPVEAVSAAVWAEVEAL 213


>gi|148231460|ref|NP_001084596.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus laevis]
 gi|46250064|gb|AAH68663.1| MGC81047 protein [Xenopus laevis]
          Length = 212

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG + AGK+T    L   L+ + Y     R P  T          L    +  
Sbjct: 5   RGALIVLEGADRAGKSTQARRLVEALKERGYRTEGLRFPERTTEIGQLIGSYLEKKSN-L 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R + V  +I+  L  G  L+ DR+  S  A+   +++     L   ++
Sbjct: 64  EDHTIHLLFSANRWEQVP-MIKEKLRSGITLVVDRYAFSGVAFTSSKENFD---LHWCKQ 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V    PD  + L +  ++   R      + E+              EK  + +  +  
Sbjct: 120 PDVGLPKPDLVLFLKVSPEVAATRGGFGNEIYETNS----------FQEKVAKRYAQLMD 169

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++     +VD++   ++V   +  +  + +  
Sbjct: 170 DKTVNWKLVDASQDIENVHRQLKELSEKAIDD 201


>gi|225716352|gb|ACO14022.1| Thymidylate kinase [Esox lucius]
          Length = 212

 Score =  143 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 80/211 (37%), Gaps = 15/211 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGKTT  + L + L        + R P  T       +  L    + 
Sbjct: 4   RRGALIVLEGVDKAGKTTQCNKLIQALLENEQPAEMMRFPERTTMIGQLINSYLEKKSN- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V  +++  L +G  L+ DR+  S  A+   +       LD  +
Sbjct: 63  LEDHTVHLLFSANRWEQVP-LMKEKLEQGITLVVDRYAFSGVAFTSAK---PGFTLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD  + L++      +R             + +E    +     +Q F ++ 
Sbjct: 119 NPDVGLPKPDLVMFLNVSPSEAARR--------GHFGTERYE--TSVFQRAVQQGFEELM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++      ++ ++ + + V  +I N   E +
Sbjct: 169 KDSSVNWQVIGASRNIEDVHADIKNHTIEAI 199


>gi|126701174|ref|YP_001090071.1| putative thymidylate kinase [Clostridium difficile 630]
 gi|254977174|ref|ZP_05273646.1| putative thymidylate kinase [Clostridium difficile QCD-66c26]
 gi|255094504|ref|ZP_05323982.1| putative thymidylate kinase [Clostridium difficile CIP 107932]
 gi|255102760|ref|ZP_05331737.1| putative thymidylate kinase [Clostridium difficile QCD-63q42]
 gi|255308581|ref|ZP_05352752.1| putative thymidylate kinase [Clostridium difficile ATCC 43255]
 gi|255316255|ref|ZP_05357838.1| putative thymidylate kinase [Clostridium difficile QCD-76w55]
 gi|255518916|ref|ZP_05386592.1| putative thymidylate kinase [Clostridium difficile QCD-97b34]
 gi|255652095|ref|ZP_05398997.1| putative thymidylate kinase [Clostridium difficile QCD-37x79]
 gi|306521829|ref|ZP_07408176.1| putative thymidylate kinase [Clostridium difficile QCD-32g58]
 gi|115252611|emb|CAJ70454.1| Thymidylate kinase (dTMP kinase) [Clostridium difficile]
          Length = 229

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 17/226 (7%)

Query: 3   SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58
            G  I  E G + +GK T   +L   L+++ Y +     P     + A   + L      
Sbjct: 2   KGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGDFGK 61

Query: 59  -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL 115
              +      +  F A R    +        EG I++ DR+  S+  +Q  +     +  
Sbjct: 62  NASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDICDREE 121

Query: 116 FLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +L+ L   E ++ ++  PDC I LD+P++   K ++NR +             D+   EK
Sbjct: 122 YLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEYLEK 181

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
                L IA         ++        S +S+   I  IV + ++
Sbjct: 182 SYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 225


>gi|315427436|dbj|BAJ49042.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
 gi|315427468|dbj|BAJ49072.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
          Length = 200

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 19/212 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +  +I+ EGI+GAGKTT   LL R L R  + V    EP         R  L      
Sbjct: 1   MKT-FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREAL--AKRV 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E  A++FAA RL  +   I  A   G  ++ DR + SS AYQ      +    + +
Sbjct: 58  NMSEEVLALLFAADRL-TLREKIVSAKQSGVYVVSDRSVVSSLAYQSAALGLR----NWV 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E++   V PD  + +D+  +  LKR++ +           +E  +++   K +  +  +
Sbjct: 113 YEVNRFAVKPDIIVYIDISPETALKRLRKKSQ--------RYE--NMVFLRKVKNAYSRV 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +   R  +VD      +VA  I+  +   +
Sbjct: 163 LHDF-RRVVVVDGEQPVDAVAEAIVEKLSRFI 193


>gi|170755522|ref|YP_001779682.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra]
 gi|169120734|gb|ACA44570.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra]
          Length = 231

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +      +
Sbjct: 61  RDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 121 DNFLNWLWDFEFKKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173

Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+       I+       + ++        S   +  +I+ I+ + +
Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225


>gi|291542136|emb|CBL15246.1| thymidylate kinase [Ruminococcus bromii L2-63]
          Length = 224

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 19/225 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M S   I  EG++G+GK T   +L   +      V     P     A A   + L     
Sbjct: 1   MKS-KIIVIEGLDGSGKATQTKILCEKISALGKKVTKLEFPNYESPAAAPVKMYLDGEFG 59

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
              D+  A A +  +A  R+       +     G ++L DR++ S+  YQ  +   +   
Sbjct: 60  DKPDDVNAYAASAFYAVDRVASYLQFWKKECDNGGVILSDRYVTSNIIYQMSKLPKEEWN 119

Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            F+D L +     +    PD  I LD+  ++  K ++ RY    S   D  E+ ++    
Sbjct: 120 SFIDWLNDFEYEKLGIPKPDLVIYLDVEPEVSQKLMEKRYGGDNSKK-DLHEK-NLRFLL 177

Query: 172 KRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWEL 211
             R+    +   +     +++        S + ++  I     E+
Sbjct: 178 DCRKS--AVYAAKKCGWKVINCCENGEIKSIEKISEEIERAAAEI 220


>gi|324512226|gb|ADY45070.1| Thymidylate kinase [Ascaris suum]
          Length = 234

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 78/218 (35%), Gaps = 16/218 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I FEG + AGK+T    +   +Q +     +   P   T   +     L   G  
Sbjct: 3   KRGALIVFEGCDRAGKSTQAQRMVGRIQARGERAELISFPDRSTDLGKFIDQYLK--GNV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E       +VFAA R   +   +R  L  G  L+ DR+  S  AY   +     L    +
Sbjct: 61  EMEPREAHLVFAANR-QALVGTMRNKLQHGTHLIVDRYTYSGIAYTLAKGLDVSLEWAKI 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V  + PDC +  DL  D   KR             +  E           +    +
Sbjct: 120 HD--VGILKPDCVLYFDLLPDEARKR--------SGFGDERLEA--YEYQCTVYKFMQTL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
                D   ++D++ S   V+T++ N++  ++    + 
Sbjct: 168 GSENADIWKVIDASKSIDEVSTDVWNLLKPVLDSAAAK 205


>gi|312128608|ref|YP_003993482.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778627|gb|ADQ08113.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 249

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 87/224 (38%), Gaps = 18/224 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G     EG +G+GK+T + LLK++L+   Y V  T          A +    +   +   
Sbjct: 17  GRLFVVEGCDGSGKSTQVHLLKKWLEFLGYTVFFTEWNSSDLVKNATKK---AKKKNLLT 73

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ A    D  E +I P L  G I+LCDR++ ++YA           ++ ++ + 
Sbjct: 74  PTTFSLLHACDFADRYERLILPHLRAGYIVLCDRYIYTAYARD-IARGCNPEWVKTVYDF 132

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESAC-------LDYFERKDVMIHEKRRQ 175
           +   V P  T    +PVD+ + R+   R  ++            D  E   +    K  Q
Sbjct: 133 A---VKPTVTFYFKVPVDVAIDRILMGRTQIKYYEAGMDLGLSTDTVESFKL-YQSKIIQ 188

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           ++  +A  +      +D   S +     +  IV   +     P 
Sbjct: 189 MYDMLAEQEG--FITIDGTLSIRQQQKMVREIVQRYLHDYSPPT 230


>gi|154174807|ref|YP_001408262.1| thymidylate kinase [Campylobacter curvus 525.92]
 gi|254808283|sp|A7GYH0|KTHY_CAMC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|112802787|gb|EAU00131.1| thymidylate kinase [Campylobacter curvus 525.92]
          Length = 194

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEG++G GK+T I ++ R  +    D  VT+EPGGT   +  R +LL  G  +  A
Sbjct: 1   MYVLFEGVDGVGKSTQIEMIARAHE----DSLVTKEPGGTKIGQKLREILL-GGDFKLSA 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123
            AE ++F A R +H + +I+P     +++L DR   S  AY    D S +   L  L   
Sbjct: 56  RAEILLFLADRAEHYQKMIKP--NSSRLILSDRGFVSGVAYALANDASLKIDDLLWLNSF 113

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +++    D  +  +    +  KR+ +R        +D  E + +    K ++   ++ + 
Sbjct: 114 ALEGKFADKIVFFEASETLIKKRLSSR------GLIDAIEARGLKYLLKVQECMKEVLKA 167

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
                  +D++    ++   I N + 
Sbjct: 168 HKFNVLYIDASEDIATINAKIENFIK 193


>gi|85057461|ref|YP_456377.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789566|gb|ABC65298.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 210

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 7/187 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I  +++ LQ++  +V V R  G +    + R   L+   +    
Sbjct: 2   KLIIFEGLDGSGKTSLIKSVQQELQKQGNEVVVIRGLGSSTIGNSIRETFLT--HNNLHN 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +  A  +   E  I+  L   KI+L DR+L S++AY+         +      +S
Sbjct: 60  LTRYFLSFANMIQTQEECIKHQLKTNKIILVDRWLGSNFAYRVYPSKIDKNY-HIFNNLS 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + PD TI L +   +GL+R  N+ +      LD  E   +   ++  + + +  + Q
Sbjct: 119 KKFIKPDITIYLKIHPQLGLERKINQKNH----QLDVIETSSLTYFQQVEKGYFEFLKKQ 174

Query: 185 PDRCHIV 191
                I+
Sbjct: 175 NIGTKII 181


>gi|315425277|dbj|BAJ46945.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
          Length = 200

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 19/212 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +  +I+ EGI+GAGKTT   LL R L R  + V    EP         R  L      
Sbjct: 1   MKT-FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREAL--AKRV 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E  A++FAA RL  +   I  A   G  ++ DR + SS AYQ      +    + +
Sbjct: 58  NMSEEVLALLFAADRL-TLREKIVSAKQSGVYVVSDRSVVSSLAYQSAALGLR----NWV 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E++   V PD  + +D+  +  LKR++ +           +E  +++   K +  +  +
Sbjct: 113 YEVNRFAVKPDIIVYIDISPETALKRLRKKSQ--------RYE--NMVFLRKVKNAYSRV 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +   R  +VD      +VA  I+  +   +
Sbjct: 163 LHDF-RRVVVVDGEQPVDAVAETIVEKLSRFI 193


>gi|109101748|ref|XP_001094132.1| PREDICTED: thymidylate kinase-like isoform 2 [Macaca mulatta]
          Length = 212

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHAVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E +     E+  Q F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAYGHERYENR--AFQERALQCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           R+      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 169 RDTTLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPLGELW 211


>gi|183220659|ref|YP_001838655.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Paris)']
 gi|189910761|ref|YP_001962316.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167775437|gb|ABZ93738.1| Thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167779081|gb|ABZ97379.1| Thymidylate kinase (dTMP kinase) [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 203

 Score =  142 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 14/203 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F  FEGI+G+GKTT    +   L  K+      REP  +   +  R  L   G  +   +
Sbjct: 7   FFVFEGIDGSGKTTVSKKVSEILSTKSISNLWHREPTDSIHGQKIREFL--QGKIKLTPD 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +  +F   R   V   I P L     L+ DR+  S+ AYQG  +      L   ++   
Sbjct: 65  EQLKLFLLDREFSVNETILPTLKSDTCLVQDRYYFSTAAYQGRDEEHAADILYMNED--K 122

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               P+    LDL  +  L+R   R   +E+     F+ +      +  Q +L I    P
Sbjct: 123 GFPEPNRVYFLDLSPEEALERRNTRGGNKEA-----FDDEKE--QTRIYQNYLAIL---P 172

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
           +    VD+    + V    +  +
Sbjct: 173 ESTIFVDATADLEEVVNFCVEDI 195


>gi|218246100|ref|YP_002371471.1| dTMP kinase [Cyanothece sp. PCC 8801]
 gi|218166578|gb|ACK65315.1| dTMP kinase [Cyanothece sp. PCC 8801]
          Length = 207

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 20/214 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58
             LFI  EGI+ AGK+T   LLK +   +     ++ EP   P  +  R      +++  
Sbjct: 2   KPLFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIK 61

Query: 59  VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 E  A +FAA R  H+ N    V +    E   ++  R+  SS AY      +  
Sbjct: 62  NKHNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC----NTQ 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              D +  ++ +   PD    +D+ +++ + R+ N  S RE      +E +  +  ++ +
Sbjct: 118 EEFDFVAGLNQRFPNPDIVFYIDINLEVAISRLSN-ASFREV-----YETEAKL--KQVK 169

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +  I      R   +D   + +S+   I++ +
Sbjct: 170 HNYKSIFAKYTGRLLKLDGTETIESIHHKIVHYL 203


>gi|171909511|ref|ZP_02924981.1| thymidylate kinase [Verrucomicrobium spinosum DSM 4136]
          Length = 218

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGKTT  + L ++   +     +++EP         R    S        
Sbjct: 1   MLIAIEGIDGAGKTTVSATLAQWCGERGLLCALSKEPTSLEWGRKLRE---SAASGRLTL 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +F   R  H E  I+PAL E  I++ DR+  S+ AYQG    +    + +  E +
Sbjct: 58  AQELDLFHKDREQHSEGSIQPALDEDAIMVLDRYYWSTAAYQGA-RGANVDDVLAFNETN 116

Query: 125 V---------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                        +             G  R++ R     S     FE  DV    + R+
Sbjct: 117 FPLPDLVLLLDLPV-----------ATGQDRIRVRGDQPNS-----FE--DVDALSRCRE 158

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           IFL +      RC IVD++  ++ V+   L +  +  Q+++   +S + +
Sbjct: 159 IFLQLPGRSQARCVIVDASRPWREVSKECLALFKQAAQQKLWKTASPRSL 208


>gi|262089274|gb|ACY24495.1| thymidylate kinase [uncultured crenarchaeote 57a5]
          Length = 245

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 34/227 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTPAAEAARHVLLSCG 58
            G FI  EG + +G++T I LL   L+   + V        E  G    EA R+ +L   
Sbjct: 33  KGRFIIIEGPDASGRSTQIELLSSKLEADGHAVLNAGLRRSELIGQGILEAKRNFVL--- 89

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               G +  ++ +AA   D +EN I P L  G ++L DR++ +  A +         + +
Sbjct: 90  ----GRKTISLFYAADFADQLENKIIPGLRAGYVVLSDRYIYTLMAREAV-RGISSSWSN 144

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----------KDV 167
           +L   +   + PD    LD+  +  + RV      ++++ LDY+E            +  
Sbjct: 145 NLYGFA---LRPDIVFYLDVDPNELVHRV-----FKKNSYLDYYESGTDLRLSDNMMESF 196

Query: 168 MIHEK-RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           ++++K  R+ F  + +        ++   S   +  ++   + + +Q
Sbjct: 197 VMYQKLLRKEFKRMQKRY--NIVSINGNRSITEINEDLQKRIDDYLQ 241


>gi|294658466|ref|XP_460810.2| DEHA2F10252p [Debaryomyces hansenii CBS767]
 gi|202953154|emb|CAG89151.2| DEHA2F10252p [Debaryomyces hansenii]
          Length = 218

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 92/224 (41%), Gaps = 24/224 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ +GK+T   +L   L        + + P  +    +  +  L+    
Sbjct: 1   MGRGQLILIEGLDRSGKSTQSGILSERLPGG----KLIKFPDRSTKVGSIINEYLTNSEL 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER------DSSQH 114
               +   ++F+A R +  ++++   L +G  ++ DR++ S  AY   +       S + 
Sbjct: 57  NLSDQTAHLLFSANRWELADSIVND-LNKGHFIVMDRYIYSGIAYSLAKSRFSNDSSPEM 115

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             +D L         PD TI L L ++          S R+    + +E+++    +  +
Sbjct: 116 ASIDWLYSPDKGLPKPDLTIFLTLSLEE--------LSNRKGWGEERYEKEN--FQKSVK 165

Query: 175 QIFLDIARNQPD-RCHIVD-SAHSFQSVATNILNIVWEL-VQKR 215
             FL++     D   HI+D +  +   V   I +++ +  + K+
Sbjct: 166 NCFLEVLNADNDASVHIIDVNNLNIDQVTAKIWDLIEQKNLNKQ 209


>gi|331220445|ref|XP_003322898.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309301888|gb|EFP78479.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 228

 Score =  142 bits (359), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 89/231 (38%), Gaps = 22/231 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI FEG++ +GK+T    L+  L++    V   R P  T A     +  L C   E
Sbjct: 6   QRGSFIVFEGLDRSGKSTQCRRLEEKLKQAGRTVESIRFPDRTTAIGQMINSYL-CQTSE 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117
               A  ++FAA R +   + I   L  G  ++CDR+  S  A+   + S +       +
Sbjct: 65  LDDHAIHLLFAANRWEKSAD-IHTTLRSGTTIICDRYAFSGTAFTAAKFSIRTPPEPEPI 123

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV------MIHE 171
            +L        +PD  I L L               RE    + +E  ++         +
Sbjct: 124 ATLACADRGLPLPDLVIFLTL--------GDQSLDNREGFGNERYENTELQDEVKRQFTQ 175

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             R  F +I     DR   VD+  + + V   I ++V   +Q  V   + K
Sbjct: 176 VVRPYFEEIHGR--DRWVNVDATGTIEEVEQRIWHVVDNHLQHFVPQSTGK 224


>gi|257059151|ref|YP_003137039.1| thymidylate kinase [Cyanothece sp. PCC 8802]
 gi|256589317|gb|ACV00204.1| thymidylate kinase [Cyanothece sp. PCC 8802]
          Length = 207

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 20/214 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58
             LFI  EGI+ AGK+T   LLK +   +     ++ EP   P  +  R      +++  
Sbjct: 2   KPLFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIK 61

Query: 59  VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 E  A +FAA R  H+ N    V +    E   ++  R+  SS AY      +  
Sbjct: 62  NKHNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC----NTQ 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              D +  ++ +   PD    +D+ +++ + R+ N      ++  + +E +  +  ++ +
Sbjct: 118 EEFDFVAGLNQRFPNPDIVFYIDINLEVAISRLSN------ASFKEVYETEAKL--KQVK 169

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +  I      R   +D   + +S+   I++ +
Sbjct: 170 HNYETIFAKYTGRLLKLDGTETIESIHHKIVHYL 203


>gi|303231908|ref|ZP_07318617.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513437|gb|EFL55470.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6]
          Length = 228

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 85/230 (36%), Gaps = 23/230 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T    L   LQ + + V     P     A     + LS      V
Sbjct: 2   GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLSGQFGTDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116
           D       + ++A  R        +    +G I++ DR+  S+  +Q  + +    +  F
Sbjct: 62  DSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKRVQF 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L+ L++          PD   +LD+P+D+    +  R         D  E  + +  +  
Sbjct: 122 LEWLEDFEFVKFGLPRPDAVCLLDVPLDVTESLMSERTGKTGGETGDIHEG-NRVYLQAV 180

Query: 174 RQIFLDIARNQPDRCHIVDSAH----------SFQSVATNILNIVWELVQ 213
              + ++        H +  A           S +S+  +I ++V  +++
Sbjct: 181 HNAYDELVERYQ--WHRISCAQQDESGTFTMRSIESIHNDIYDVVKTILR 228


>gi|302795849|ref|XP_002979687.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
 gi|300152447|gb|EFJ19089.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii]
          Length = 253

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 19/201 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ +GK++    L  FL+     V   R P  T A  ++    L  G + 
Sbjct: 5   KRGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAE- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     +   LM G  L+ DR+  S  A+   +     L L+  +
Sbjct: 64  LDDRAVHLLFSANRWE-KRLQMEKKLMAGTTLVVDRYSYSGVAFSAAKG----LDLEWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V     D  + LD+  +          ++R     + +E+  +   +K    +  + 
Sbjct: 119 APEVGLPAADLVLYLDISPEEA--------AVRGGYGDERYEQ--LDFQKKVALQYKGL- 167

Query: 182 RNQPDRCHIVDSAHSFQSVAT 202
             Q  R  IVD+  SF  V  
Sbjct: 168 --QGKRWKIVDARQSFDQVHE 186


>gi|291166624|gb|EFE28670.1| dTMP kinase [Filifactor alocis ATCC 35896]
          Length = 226

 Score =  142 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 79/220 (35%), Gaps = 17/220 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58
            G  I  EG +G+GK T  +LL ++L  +     +   P     + +   + L+      
Sbjct: 2   KGKLIVIEGTDGSGKETQSNLLYQYLSDRGIPCRIVHFPNYNSPSSSLVKMYLAGEFGTE 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQHL 115
            D       +I +A  R    +        +G +++ DR++ S+  +Q  +      ++ 
Sbjct: 62  ADSVSPYIASIFYAGDRYASWKTDWMSFYEQGGVVIVDRYVMSNLIHQASKLKTTEEKNQ 121

Query: 116 FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           F D L ++         PD TI L + +D+    ++ R +            ++    ++
Sbjct: 122 FRDWLYDLEYHIFSLPKPDMTIFLHVDIDVTFALMKERLNKITDEEKKDIHEQNYDYMKR 181

Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILNI 207
             +     A+   +    VD            +   I+ +
Sbjct: 182 SYETACYFAQQ--ENWKRVDCVLKGGMKPIDVIHGEIIAL 219


>gi|307109187|gb|EFN57425.1| hypothetical protein CHLNCDRAFT_20952 [Chlorella variabilis]
          Length = 230

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 18/213 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G FI FEG + AGK+T   +L   LQ +     + R P   TP  +     L S    +
Sbjct: 7   RGAFIVFEGADRAGKSTQCQMLVEHLQAQGVAAELWRFPDRTTPIGKMINSYLTSQS--D 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +  E ++R  L EG  L+ DR+  S  A+   +     L      
Sbjct: 65  IDDAAVHLLFSANRWEKREELLR-KLHEGTTLVVDRYAYSGVAFTAAK-GLPGLDRAWCM 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD    L L V+    R             + +E+       K    F  + 
Sbjct: 123 APDAGLPAPDAVFFLCLTVEQAAAR--------GGYGEERYEK--DEFQRKVLDQFHAM- 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +     +VD++ S  ++   +      +V +
Sbjct: 172 --RGSSWRVVDASQSIDAIQQQLREQAAAVVAR 202


>gi|255071733|ref|XP_002499541.1| predicted protein [Micromonas sp. RCC299]
 gi|226514803|gb|ACO60799.1| predicted protein [Micromonas sp. RCC299]
          Length = 216

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 16/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG++  GKTT  + L   L+    +  + R P  T       +  L   +D  
Sbjct: 9   RGAFILFEGVDRCGKTTQSTKLVESLKAAGVNAELWRYPDRTTEMGKMINAYLQSSLD-M 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A  ++F+A R +     +  AL +G  L+ DR+  S  A+   +     L L+  + 
Sbjct: 68  DDGAIHLLFSANRWE-KRAAMEKALGDGVTLVVDRYSYSGVAFTAAK-EVPGLDLEWCKA 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD  + LD+PVD    R             + +E     + E+ R  F  +  
Sbjct: 126 PERGLLRPDAVLYLDMPVDAAKTR--------GGFGEERYE--TGELQERVRTHFRVLRE 175

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              D   I+D++ +   V +       E +Q+
Sbjct: 176 ---DWWTIIDASGTIDDVHSKCAAAADEAIQR 204


>gi|172986|gb|AAA35158.1| thymidylate kinase [Saccharomyces cerevisiae]
 gi|190409534|gb|EDV12799.1| thymidylate kinase [Saccharomyces cerevisiae RM11-1a]
 gi|207343848|gb|EDZ71181.1| YJR057Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273082|gb|EEU08037.1| Cdc8p [Saccharomyces cerevisiae JAY291]
          Length = 216

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 2   MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + + + I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 59  QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116

Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +  V  + PD T+ L   D+             + +     + +E   V   EK +Q F
Sbjct: 117 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 164

Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212
           + +   +     +   IVD +    Q V   I  IV  ++
Sbjct: 165 MKLLDKEIRKGDESITIVDVTNKDIQEVEALIWQIVEPVL 204


>gi|242046716|ref|XP_002461104.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
 gi|241924481|gb|EER97625.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor]
          Length = 254

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 85/213 (39%), Gaps = 19/213 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  +  EG++ +GK++  + L  FL+ K YD    R P    +        L+    + 
Sbjct: 51  RGALVVLEGLDRSGKSSQCARLLSFLKGKGYDAEGWRFPDRATSVGQMISAYLA-NESQL 109

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +    ++   L+ G  L+ DR+  S  A+   +     L ++  + 
Sbjct: 110 DDRTIHLLFSANRWE-KRALMESKLLSGTTLVVDRYSYSGVAFSAAKG----LDIEWCKA 164

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD  I LD+  +   +R             + +E+  +   +K  + +  +  
Sbjct: 165 PENGLIAPDLVIYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVAEHYHSL-- 212

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +     ++D +   ++V   + ++    +Q+R
Sbjct: 213 -RGSTWKVIDGSLPMETVEEKLRDLATSCIQER 244


>gi|145505513|ref|XP_001438723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405895|emb|CAK71326.1| unnamed protein product [Paramecium tetraurelia]
          Length = 216

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 23/212 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G+FI+ EG++ +GK+T   LL + L  K         P  T          L  G   
Sbjct: 13  NRGVFIALEGLDKSGKSTQAKLLSQKLNAKK-----VSFPDRTTQLGLIISDYL-RGNKN 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +     I   L +G  ++ DR+  S  A+   +     L ++  +
Sbjct: 67  MSDEVIHLLFSANRWEQ-HTSILKQLQDGTNIVSDRYAYSGVAFSAAKG----LPIEWCK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD T  L  P++   KR             + +E  +    +K    F  +A
Sbjct: 122 APDAGLIQPDMTFYLTAPIEELSKR--------GDYGKEIYE--NSSFQQKVGSFFDQLA 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               +  + +D+  S   +   ILN + E + 
Sbjct: 172 LE--ENFYKIDALKSIDEIQAEILNRISEKLN 201


>gi|259147521|emb|CAY80772.1| Cdc8p [Saccharomyces cerevisiae EC1118]
 gi|323308467|gb|EGA61712.1| Cdc8p [Saccharomyces cerevisiae FostersO]
 gi|323336951|gb|EGA78208.1| Cdc8p [Saccharomyces cerevisiae Vin13]
          Length = 215

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + + + I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +  V  + PD T+ L   D+             + +     + +E   V   EK +Q F
Sbjct: 116 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 163

Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212
           + +   +     +   IVD +    Q V   I  IV  ++
Sbjct: 164 MKLLDKEIRKGDESITIVDVTNKDIQEVEALIWQIVEPVL 203


>gi|302338530|ref|YP_003803736.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293]
 gi|301635715|gb|ADK81142.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293]
          Length = 206

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 20/208 (9%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
            FEG++GAG TT   LL    + K   V +T EP  +      R VL   G   +  E  
Sbjct: 12  VFEGLDGAGTTTQALLLADRCKLKGKAVQLTFEPTASEIGVVIRKVL--AGQLPYHPETL 69

Query: 68  AIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A +F A R +H+  +  I   L +   ++ DR+L SS AYQ        +  D + EI+ 
Sbjct: 70  ARLFVADRYEHLFGKGGILSLLDKHIAVIGDRYLFSSLAYQSL-----DVDFDIVYEINS 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LDIAR 182
              +P+  I +DL  +   +R+ +R         D FE   + + ++ R+ +   LD   
Sbjct: 125 MFPLPERLIYIDLAPEECERRMSDRDQR------DIFE--TLALQKRVRERYEHTLDRYV 176

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
               + H +D A + + +A  + +IV +
Sbjct: 177 KSGMKIHRLDGALAKEELAEKVWSIVRD 204


>gi|323304253|gb|EGA58027.1| Cdc8p [Saccharomyces cerevisiae FostersB]
          Length = 215

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRXGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + + + I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +  V  + PD T+ L   D+             + +     + +E   V   EK +Q F
Sbjct: 116 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 163

Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212
           + +   +     +   IVD +    Q V   I  IV  ++
Sbjct: 164 MKLLDKEIRKGDESITIVDVTNKDIQEVEALIWQIVEPVL 203


>gi|313893344|ref|ZP_07826918.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442113|gb|EFR60531.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 228

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 23/229 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T   LL   L ++ + V     P     A     + L+      V
Sbjct: 2   GTLIILEGGDGSGKATQTKLLVERLIKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116
            +      + ++A  R              G I++ DR+  S+  +Q  +   Q     F
Sbjct: 62  HDVNPYVASSMYAIDRFASFRTDWEEFYKNGGIIIADRYTTSNMVHQMVKYDDQKERTAF 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L++          PD   +LD+P+++    +  R      +  D  E  +       
Sbjct: 122 LDWLEDFEFKKFGLPTPDAVCLLDMPLEVSEALMAERTGKTGGSTGDIHEG-NHQYLVAV 180

Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212
              + ++        H +  A           + + +  ++   V  L+
Sbjct: 181 HDAYEELVERYQ--WHRIPCASKDEFSQYTLRTIEEIHNDVYQAVVNLL 227


>gi|148378062|ref|YP_001252603.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC
           3502]
 gi|153932140|ref|YP_001382461.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC
           19397]
 gi|153937766|ref|YP_001386013.1| putative thymidylate kinase [Clostridium botulinum A str. Hall]
 gi|148287546|emb|CAL81610.1| thymidylate kinase [Clostridium botulinum A str. ATCC 3502]
 gi|152928184|gb|ABS33684.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC
           19397]
 gi|152933680|gb|ABS39179.1| putative thymidylate kinase [Clostridium botulinum A str. Hall]
          Length = 231

 Score =  141 bits (357), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +      +
Sbjct: 61  RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173

Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+       I+       + ++        S   +  +I+ I+ + +
Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225


>gi|171204|gb|AAA34486.1| CDC8 gene [Saccharomyces cerevisiae]
          Length = 216

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 2   MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDTF 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + + + I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 59  QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116

Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +  V  + PD T+ L   D+             + +     + +E   V   EK +Q F
Sbjct: 117 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 164

Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212
           + +   +     +   IVD +    Q V   I  IV  ++
Sbjct: 165 MKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVL 204


>gi|237752726|ref|ZP_04583206.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376215|gb|EEO26306.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430]
          Length = 193

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 24/208 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L+I+ EGI+ AGK+T ++ LK   +    D   T EPG TP  +  R +LL+   +    
Sbjct: 6   LYIALEGIDTAGKSTQVARLKEVFK----DAVFTFEPGATPLGKHIREILLN--TEIVSP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R +H  +VI P L   K++L DR L S  AY           L+S     
Sbjct: 60  KAEMLLFLADRAEHFASVIAPNLD--KLILSDRSLISGIAY---ARDFDMEMLESFNAFV 114

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQI--FLDIA 181
           ++ ++P+  I+L+L       R+  +   + E   +DY     + + E+ ++   FL I 
Sbjct: 115 LENILPNKAILLELDKQTLEYRLNQKGRDKIEQRGIDYL----LDLQERLKEAMEFLKIE 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
                   +++++    S+   I+  + 
Sbjct: 171 S------LVINASLPQDSITKQIVEFIQ 192


>gi|330797527|ref|XP_003286811.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum]
 gi|325083184|gb|EGC36643.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum]
          Length = 219

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 21/215 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           M  GLFI FEG +  GK+T +  L   +   +N      R P   TP  +     L    
Sbjct: 13  MKRGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYL--QN 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                  A  ++F++ R +  ++ I   L  G  ++ DR+  S  AY   +     + +D
Sbjct: 71  ATNMDDRALHLLFSSNRWE-AKDSILELLNSGTNIVVDRYSYSGVAYTAAKG----IDVD 125

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                      PD    L +  +   KR             + +E+  V    K +QI+ 
Sbjct: 126 WCYSCEKGLPEPDIVFYLSMSTEDATKR--------GDYGGERYEK--VEFQMKIKQIYE 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +  +  P    ++++  + + V+  I  I    ++
Sbjct: 176 EKLKR-PS-WKVINANRTVEEVSNEINQIFDSELE 208


>gi|302807401|ref|XP_002985395.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
 gi|300146858|gb|EFJ13525.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii]
          Length = 229

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 19/201 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ +GK++    L  FL+     V   R P  T A  ++    L  G + 
Sbjct: 5   KRGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAE- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     +   LM G  L+ DR+  S  A+   +     L L+  +
Sbjct: 64  LDDRAVHLLFSANRWE-KRLQMERKLMAGTTLVVDRYSYSGVAFSAAKG----LDLEWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V     D  + LD+  +          ++R     + +E+  +   +K    +  + 
Sbjct: 119 APEVGLPAADLVLYLDISPEEA--------AVRGGYGDERYEQ--LDFQKKVALQYKGL- 167

Query: 182 RNQPDRCHIVDSAHSFQSVAT 202
             Q  R  IVD+  SF  V  
Sbjct: 168 --QGKRWKIVDARQSFDQVHE 186


>gi|86152174|ref|ZP_01070386.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153341|ref|ZP_01071545.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121612951|ref|YP_001000455.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|283957252|ref|ZP_06374713.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336]
 gi|315124289|ref|YP_004066293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|166221735|sp|A1VZB4|KTHY_CAMJJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|85840959|gb|EAQ58209.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85843067|gb|EAQ60278.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249371|gb|EAQ72331.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|283791264|gb|EFC30072.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336]
 gi|315018011|gb|ADT66104.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 192

 Score =  141 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++  + + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILK--INQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   P   I L    ++  +R+  +        LD  E++ +      +     +    
Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163

Query: 185 PDR----CHIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S + +   I   + 
Sbjct: 164 KEKISIEILTLDAKESKEKLHQQIKEFLQ 192


>gi|223938822|ref|ZP_03630710.1| thymidylate kinase [bacterium Ellin514]
 gi|223892520|gb|EEF58993.1| thymidylate kinase [bacterium Ellin514]
          Length = 229

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG++G+GK+T I LLKR+L+ + + V  +          A          +   
Sbjct: 12  GRLIAVEGLDGSGKSTQIYLLKRWLELQGFKVFFSEWNSSQLVKSATSK---GKKRELLT 68

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +++ A    D  E  + P L  G ++LCDR++ +++A           ++  L   
Sbjct: 69  PTTFSLIHATDFADRYERQLVPLLRAGYLVLCDRYIFTAFARDTV-RGCPPEWVRGLYNF 127

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL-------DYFERKDVMIHEKRRQ 175
           +     PD T      +++ L+R+   R  L+            D +E   +    +  +
Sbjct: 128 AAH---PDLTFFFKAQLEVSLQRILDGRPQLKYFEAGMDMRLSSDPYESFRI-FQGRILE 183

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +L ++        ++D+    + V      +V ELV  ++
Sbjct: 184 QYLAMSTEF--NFSVLDANQPVE-VQQ---TLVRELVAAKI 218


>gi|119591691|gb|EAW71285.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_c [Homo
           sapiens]
          Length = 254

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211


>gi|242014820|ref|XP_002428083.1| thymidylate kinase, putative [Pediculus humanus corporis]
 gi|212512602|gb|EEB15345.1| thymidylate kinase, putative [Pediculus humanus corporis]
          Length = 601

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 35/211 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I FEG + AGKTT    L   L          + P                  ++  
Sbjct: 416 GALIVFEGCDRAGKTTQCKKLVEKLNELGIKSQFMQFP------------------EDLN 457

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   ++F+A R ++   +++    E   L+ DR+  S  AY   +            + 
Sbjct: 458 DQTVHLLFSANRWENQPKMVKLLHEE-VTLIVDRYSFSGVAYSAAKPGMDF---KWCYKP 513

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +    PD   +L +PV++  KR+            + +E  D    +     +    + 
Sbjct: 514 EIGLPKPDLVFLLYVPVNVLKKRI--------GFGEERYENND--FQQSVFDNY---IKM 560

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + D  H++D++ +   +  +IL     ++ +
Sbjct: 561 KDDTWHLIDASKNINEIHEDILKQTQRIIHE 591


>gi|168181169|ref|ZP_02615833.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916]
 gi|182667987|gb|EDT79966.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916]
 gi|322804327|emb|CBZ01877.1| thymidylate kinase [Clostridium botulinum H04402 065]
          Length = 231

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L R+N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +      +
Sbjct: 61  RDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173

Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+       I+       + ++        S   +  +I+ I+ + +
Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225


>gi|257459649|ref|ZP_05624758.1| thymidylate kinase [Campylobacter gracilis RM3268]
 gi|257443074|gb|EEV18208.1| thymidylate kinase [Campylobacter gracilis RM3268]
          Length = 208

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 26/218 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
           +++ FEGI+G GK+T I+ L     +      VT+EPGGT   EA R ++L         
Sbjct: 1   MYVIFEGIDGVGKSTQIARLAAAFPQ----AIVTKEPGGTKLGEAVRSLVLGEDFKWRRG 56

Query: 61  ---------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD- 110
                    E    AE ++F A R +H E VI+     G ++L DR   S  AY    D 
Sbjct: 57  SVNLREVCGEISKRAELLLFLADRAEHYERVIKG--GAGGLVLSDRGFISGLAYALANDE 114

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            +    L +L + ++     D  ++      +   R++ R S       D  E + +   
Sbjct: 115 GADISELIALNKFALGGKFADKIVLFSADEQLIRHRLKTRASS------DIIEARGLKYL 168

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + + +              +D+A S + +   I N +
Sbjct: 169 MRVQDLMAQACAACGVETLQIDAAQSEEVICDQIKNFI 206


>gi|57237611|ref|YP_178859.1| thymidylate kinase [Campylobacter jejuni RM1221]
 gi|86150209|ref|ZP_01068436.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597533|ref|ZP_01100767.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|205356734|ref|ZP_03223494.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218562394|ref|YP_002344173.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|14285520|sp|Q9PPF3|KTHY_CAMJE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|73920815|sp|Q5HV26|KTHY_CAMJR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|57166415|gb|AAW35194.1| thymidylate kinase [Campylobacter jejuni RM1221]
 gi|85839325|gb|EAQ56587.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190125|gb|EAQ94100.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360100|emb|CAL34894.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|205345373|gb|EDZ32016.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|315058220|gb|ADT72549.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni S3]
 gi|315928307|gb|EFV07623.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929197|gb|EFV08419.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 305]
          Length = 192

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   P   I L    ++  +R+  +        LD  E++ +      +     +    
Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163

Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209
            ++  +    +D+  S + +   I   + 
Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192


>gi|6322517|ref|NP_012591.1| Cdc8p [Saccharomyces cerevisiae S288c]
 gi|1170719|sp|P00572|KTHY_YEAST RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|3318768|pdb|2TMK|A Chain A, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
           Deoxythymidine Monophosphate (Azt-Mp)
 gi|3318769|pdb|2TMK|B Chain B, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'-
           Deoxythymidine Monophosphate (Azt-Mp)
 gi|3318847|pdb|1TMK|A Chain A, Yeast Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Dtmp)
 gi|3318848|pdb|1TMK|B Chain B, Yeast Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Dtmp)
 gi|4558230|pdb|3TMK|A Chain A, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558231|pdb|3TMK|B Chain B, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558232|pdb|3TMK|C Chain C, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558233|pdb|3TMK|D Chain D, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558234|pdb|3TMK|E Chain E, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558235|pdb|3TMK|F Chain F, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558236|pdb|3TMK|G Chain G, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|4558237|pdb|3TMK|H Chain H, Crystal Structure Of Yeast Thymidylate Kinase Complexed
           With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution:
           Implications For Catalysis And Azt Activation
 gi|172971|gb|AAB05644.1| thymidylate kinase [Saccharomyces cerevisiae]
 gi|1015725|emb|CAA89585.1| CDC8 [Saccharomyces cerevisiae]
 gi|1019679|gb|AAB39283.1| ORF YJR057w [Saccharomyces cerevisiae]
 gi|151945125|gb|EDN63376.1| thymidylate kinase [Saccharomyces cerevisiae YJM789]
 gi|285812946|tpg|DAA08844.1| TPA: Cdc8p [Saccharomyces cerevisiae S288c]
          Length = 216

 Score =  141 bits (356), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 2   MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + + + I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 59  QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116

Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            +  V  + PD T+ L   D+             + +     + +E   V   EK +Q F
Sbjct: 117 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 164

Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212
           + +   +     +   IVD +    Q V   I  IV  ++
Sbjct: 165 MKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVL 204


>gi|14161247|gb|AAK54673.1|AF251151_2 TMP kinase [Loofah witches'-broom phytoplasma]
          Length = 209

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 12/213 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKTT I  L++ L+++  +  + +  G +      R++ L+   ++   
Sbjct: 2   KLIVFEGLDGSGKTTLIQELQQKLKKQKINNKIYQGLGSSSIGTEIRNLFLN--YNQVDY 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSLQ 121
                +         + +I P L + ++++ DR+L S+YAYQ     + +     L  L 
Sbjct: 60  ITRFYLSITNMAQIQKELIYPHLKQNQLIILDRWLPSTYAYQLFPYLKQTKSCFDLKELF 119

Query: 122 EISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +I+ +   + P   I LD+   IG +R Q     +++  LD  E+K +  H+   + +  
Sbjct: 120 DITHKKLFIQPHLLIYLDINPLIGKERKQ----TQKNHQLDIIEQKSLTYHQTVHKGYYH 175

Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +   Q ++  I++   S QS  T I+ ++ ++
Sbjct: 176 YLTHYQNNKQLILNGIDSLQSNVTKIMKLIRDI 208


>gi|325914525|ref|ZP_08176869.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539295|gb|EGD10947.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937]
          Length = 226

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 39/226 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V  ++EP         R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARNLATTLEAAGARVKSSKEPTNGHWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HVE +I PAL  G+I++ DR+  S  AYQG         L+    
Sbjct: 65  SADEEAELLIRDRHEHVETLIAPALARGEIVILDRYFPSMVAYQGAAGLPLDALLER-NA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + R IF  +    P +  ++D++    SV    L IV   + +R+S
Sbjct: 163 RCRAIFNAL--QLPGK-QVLDASADADSVLRQALTIVIAALAERLS 205


>gi|319956694|ref|YP_004167957.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419098|gb|ADV46208.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511]
          Length = 191

 Score =  141 bits (356), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 17/205 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T I L+      ++ +  +TREPGGT   E AR +LL   +     
Sbjct: 1   MYVLFEGIDTCGKSTQIRLIA----AEHPEAIITREPGGTRFGEKAREILLEAKLQ--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R +H E ++RP     K+L+ DR   S   Y           L +L   +
Sbjct: 55  RAELLLFLADRAEHYEEIVRP--NRDKLLISDRGFLSGIGYALANGGVSLEELIALNHFA 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +Q   PD  I  +       +R+  +     E   +DY     + + EK ++    +A  
Sbjct: 113 LQGDWPDHIIFFETDEATLRRRLGEKSADGIEERGIDYL----LTVQEKMKEALPKLA-- 166

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
                 I+D+  S +++   I+  +
Sbjct: 167 --IPTLILDARESVETIHQKIVTYL 189


>gi|284926012|gb|ADC28364.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 192

 Score =  141 bits (356), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 21/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   P   I L     +  +R+  +        LD  E++ +      +     +    
Sbjct: 111 LENFFPQKIIFLKGDASLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163

Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209
            ++  +    +D+  S + +   I   + 
Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192


>gi|310779557|ref|YP_003967890.1| thymidylate kinase [Ilyobacter polytropus DSM 2926]
 gi|309748880|gb|ADO83542.1| thymidylate kinase [Ilyobacter polytropus DSM 2926]
          Length = 223

 Score =  140 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 87/228 (38%), Gaps = 25/228 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   +L   L+ +   V     P     A A   + L+       
Sbjct: 2   GKLIVIEGTDSSGKQTQTEILYEKLKSQGIKVKKISFPNYDSPASAPVKMYLAGEFGKKA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116
           +E      + ++A  R    +       +E  +++ DR+  S+  +Q  + +  H    +
Sbjct: 62  NEVNPYPVSTMYAVDRYASFKKDWEDFYLEAGVVITDRYTTSNMVHQASKFTDPHEKVKY 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L+++    ++   PD    L++PVD+  K + +R +            KDV   +  
Sbjct: 122 LDWLEDLEYDKMEIPKPDLVFFLNMPVDVAQKLMSDRKNKITGDDAKDIHEKDVEYLKMS 181

Query: 174 RQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            Q   DIA+          +  R   +D       ++  I   V E++
Sbjct: 182 HQNACDIAKTYKWKEIMCVEKGRLKKID------EISEEIFEAVKEIL 223


>gi|269962033|ref|ZP_06176387.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833117|gb|EEZ87222.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 127

 Score =  140 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 7/130 (5%)

Query: 83  IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDI 142
           I+PAL   + ++ DR   SS AYQG         + +L++ ++ E  P  T+ +D+   +
Sbjct: 2   IKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDTTLGEFKPAFTLYMDIDPRV 61

Query: 143 GLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202
           GL+R + R        LD  E+ D+   E+ R+ +L +A    D   ++++  S + VA 
Sbjct: 62  GLERARGR------GELDRIEKMDISFFERTRERYLALANAD-DSIVVINAEQSIEEVAQ 114

Query: 203 NILNIVWELV 212
           +I   + E +
Sbjct: 115 DIKAALNEWL 124


>gi|255644957|gb|ACU22978.1| unknown [Glycine max]
          Length = 299

 Score =  140 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 81/222 (36%), Gaps = 21/222 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  +  EG++ +GK++  S L  FL+ +     + R P  T          L     +
Sbjct: 56  SRGALVVLEGLDRSGKSSQCSRLVPFLEGQGISAELWRFPDRTTNVGQMISAYL-TNTSQ 114

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L  +  +
Sbjct: 115 LDDHTIHLLFSANRWE-KRSLMESKLKTGTTLIVDRYSYSGVAFSSAKG----LDFEWCK 169

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +    PD  + LD+  +   +R             + +E+  +   +K    +  + 
Sbjct: 170 VPEIGLPAPDVVVYLDISPEKAAER--------GGYGGERYEK--LEFQKKVADWYKVL- 218

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLSS 221
                    VD+    + V   +  IV + V   ++ SP   
Sbjct: 219 --HDVSWKDVDACQPIEDVEKQLQEIVLDCVTECRKGSPFPP 258


>gi|307747676|gb|ADN90946.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni M1]
          Length = 192

 Score =  140 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKTH--QNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   P   I L    ++  +R+  +        LD  E++ +      +     +    
Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163

Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209
            ++  +    +D+  S + +   I   + 
Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192


>gi|157415037|ref|YP_001482293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047110|sp|A8FLH9|KTHY_CAMJ8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157386001|gb|ABV52316.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315931181|gb|EFV10153.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 327]
          Length = 192

 Score =  140 bits (355), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 21/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   P   I L    ++  +R+  +        LD  E++ +      +     +    
Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163

Query: 185 PDR----CHIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S + +   I   + 
Sbjct: 164 KEKISIEILTLDAKESKEKLHQQIKEFLQ 192


>gi|226947280|ref|YP_002802371.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto]
 gi|226842994|gb|ACO85660.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto]
          Length = 231

 Score =  140 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 31/234 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L  +N  V     P     + A   + LS    
Sbjct: 1   MERGRLIVIEGSDGSGKATQTKKLYDKLVTENKKVKKVEFPNYKSESSALIKMYLSGEFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +      +
Sbjct: 61  RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173

Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+       I+       + ++        S   +  +I+ I+ + +
Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225


>gi|150402215|ref|YP_001329509.1| thymidylate kinase [Methanococcus maripaludis C7]
 gi|166221755|sp|A6VFY2|KTHY_METM7 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|150033245|gb|ABR65358.1| dTMP kinase [Methanococcus maripaludis C7]
          Length = 199

 Score =  140 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 52/229 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI FEGI+G GKTT   L+   L  K      T EP      ++ R +L      
Sbjct: 1   MNK--FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREIL---SGS 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E  A++FAA R++HV   I   L +   ++ DR++ SS  YQ         F+ ++
Sbjct: 51  KCQKETLALLFAADRVEHVSK-IEEDLKK-SHVVSDRYVYSSIVYQMS-QGIPKDFIYTI 107

Query: 121 QEISVQEVMPDCTIILDLPV----------DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            + +                          +  LKR+++R         + FE+  + I 
Sbjct: 108 NDYAK-------------TPDLVVLLDVDLNEALKRMESREK-------EIFEK--IEIQ 145

Query: 171 EKRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212
           +K ++ +  +  ++ ++        I+D ++ S   V   ILN + + +
Sbjct: 146 KKIKEGYYSLINSENEKFMPKYGFIIIDTTSKSITQVFDEILNAIIDKI 194


>gi|308062738|gb|ADO04626.1| thymidylate kinase [Helicobacter pylori Cuz20]
          Length = 191

 Score =  140 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +  VT+EPGGT   E  RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALVTKEPGGTRMGEHLRHIALN---ESISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+P+  I+L +  +   +R+  +        LD  E +        +Q     A   
Sbjct: 107 TQSVLPEKIILLLIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S + +   I+  + 
Sbjct: 160 KEKFGCEVLELDAQKSVEDLHRQIVAFIE 188


>gi|242309052|ref|ZP_04808207.1| dTMP kinase [Helicobacter pullorum MIT 98-5489]
 gi|239524476|gb|EEQ64342.1| dTMP kinase [Helicobacter pullorum MIT 98-5489]
          Length = 189

 Score =  140 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 17/206 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+ +GK+T I  LK  LQ    +   T EPG TP  +  R +LL   ++   +
Sbjct: 1   MYVVIEGIDTSGKSTQIQELKLALQ----EAIFTFEPGATPLGKKLRKILLEDSIE-LDS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++F A R  H   +++      K+++ DR L S  AY  +        L +    +
Sbjct: 56  RTEMLLFLADRAQHTHEILKA--NPDKLIISDRSLISGMAYAKDF---DFETLKAFNLFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q ++P   I L+L  +   +R+Q++         D  E++ +    + +Q    I +  
Sbjct: 111 TQGILPQKVIFLELQKEDLQQRLQSKNE-------DKIEQRGLEYLLELQQRTKAIIKKL 163

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
                 +++     ++   I+N + E
Sbjct: 164 QLPYISINANLPKTTITQQIINFIKE 189


>gi|16975313|pdb|1E9C|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And
           Appnp
 gi|16975314|pdb|1E9D|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
           Aztmp And Adp
 gi|16975315|pdb|1E9E|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With
           Dtmp And Adp
          Length = 215

 Score =  140 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 7   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  AY G +   ++  LD  +
Sbjct: 66  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAYTGAK---ENFSLDWCK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 172 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLKELW 214


>gi|296206035|ref|XP_002750035.1| PREDICTED: thymidylate kinase-like isoform 1 [Callithrix jacchus]
          Length = 212

 Score =  140 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  LEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVMDRYAFSGVAFSGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  Q F  + 
Sbjct: 119 QPDVGLPRPDLVLFLQLQLADAAKR--------SAFGHERYE--NGAFQERALQCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           R+      +VD++ S ++V  +IL +  + ++
Sbjct: 169 RDTTVNWKMVDASKSIEAVHEDILVLAEDAIR 200


>gi|326925772|ref|XP_003209083.1| PREDICTED: thymidylate kinase-like isoform 1 [Meleagris gallopavo]
          Length = 212

 Score =  140 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 15/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ AGK+T    L + LQ   +   + R P  T          LS    E 
Sbjct: 5   RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLS-REREL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +HV + ++  L +G  L+ DR+  S  A+   +   ++  L+  ++
Sbjct: 64  EDHVVHLLFSANRWEHVTS-MKEKLHQGITLVVDRYAFSGVAFTSAK---ENFCLEWCKQ 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             V    PD  + L L  +    R         +   + +E       +K  Q F  +  
Sbjct: 120 PDVGLPKPDLILFLQLSPEEAAAR--------GNFGRERYENGP--FQKKVLQSFHHLMN 169

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +      +D++ S + +   I  +  + +Q+
Sbjct: 170 EKTLNWKTMDASKSIEDLHREIKTVAEKTMQE 201


>gi|188528244|ref|YP_001910931.1| thymidylate kinase [Helicobacter pylori Shi470]
 gi|238691955|sp|B2UVL9|KTHY_HELPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|188144484|gb|ACD48901.1| thymidylate kinase [Helicobacter pylori Shi470]
          Length = 191

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +  VT+EPGGT   E  RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALVTKEPGGTRMGEHLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+PD  I+L +  +   +R+ ++        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPDKIILLLIDKEGLKQRLSHK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I+  + 
Sbjct: 160 KEQFGCEVLELDAQKSVWDLHRQIVAFIE 188


>gi|261335952|emb|CBH09285.1| putative thymidylate kinase [Heliconius melpomene]
          Length = 208

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 21/213 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGV 59
           +  G FI  EG++  GKTT    L   L+ K         P   T   E     L S   
Sbjct: 3   LKRGAFIVIEGVDRTGKTTQAKKLVESLKNKQVSAEYMNFPDRKTDIGEVINSYLTSK-- 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           ++   EA  ++F+A R + V N I+  L+ G  ++ DR+  S  AY   +     L L  
Sbjct: 61  NDLSNEAIHLLFSANRWEKV-NYIKEKLLNGITVIVDRYCFSGVAYSAAKG----LDLSW 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +        PD      LP    L+ VQ R         + +E       +K    ++ 
Sbjct: 116 CKSPDAGLPKPDKVFFFTLP----LEHVQQRNGF----GSERYE--VPEFQKKVTNTYMK 165

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +     D   ++D++ S + +   ++  V  +V
Sbjct: 166 LKE---DNWDMLDASRSLEVIHKELVEKVLSVV 195


>gi|254455554|ref|ZP_05068983.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082556|gb|EDZ59982.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 204

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 9/212 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+    I FEGIEG+GK+ HIS++ ++L +K  +    REPGG P +E  R ++L+   D
Sbjct: 1   MSKKPIIVFEGIEGSGKSHHISIVSKYLDKKKINYIKIREPGGNPNSEKIRKLILNNKSD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    + +++ AAR ++++ + +    +  +   DRF DS+ AYQ          ++ +
Sbjct: 61  -FNKNTDLLLYLAARSENIKTIKKYYKKKIIL--IDRFTDSTIAYQHYGMGIDIKIINLI 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  +  +    T +  +       R++ R        L+ +++ ++  + K +  FL +
Sbjct: 118 HKFLLDNISVSFTFLNLVNKKNLYLRLKKRKK------LNRYDKFNMNFYNKVQNGFLKL 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           A  + +  H+V+S    +     IL  + +L+
Sbjct: 172 ANLKKNSYHLVNSNLDIKLNEKLILKKIDKLI 203


>gi|170582308|ref|XP_001896072.1| thymidylate kinase [Brugia malayi]
 gi|158596802|gb|EDP35082.1| thymidylate kinase, putative [Brugia malayi]
          Length = 213

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 15/211 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG + AGK+     L   ++    DV +   P  +          L   V+  
Sbjct: 6   RGAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLKKEVE-M 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +   +VFAA R   +  ++   L++G  L+ DR+  S  AY   +  + ++ ++  + 
Sbjct: 65  DPKEAHLVFAANR-QALMPLMMKKLLKGTHLVVDRYAYSGIAYTLAK-GADNITMEWAKL 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLDIA 181
             + E+ PDC I  +L  +   KR         S   D  ER D      K  ++   +A
Sbjct: 123 ADMGELRPDCVIYFNLSFEEAQKR---------SGFGD--ERFDFGNFQGKVSKVMEQLA 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
               D   +VD++ + + ++ N+ N+V  ++
Sbjct: 172 DEDRDLWKVVDASLTVEEISENVWNLVAPIL 202


>gi|148926934|ref|ZP_01810611.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845018|gb|EDK22115.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 192

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 21/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           ++   P   I L+   ++  +R+  +        LD  E++ +      +     +    
Sbjct: 111 LENFFPQKIIFLEGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163

Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209
            ++  +    +D+  S + +   I   + 
Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192


>gi|159906007|ref|YP_001549669.1| dTMP kinase [Methanococcus maripaludis C6]
 gi|238686994|sp|A9AAR4|KTHY_METM6 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|159887500|gb|ABX02437.1| dTMP kinase [Methanococcus maripaludis C6]
          Length = 199

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 52/229 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI FEGI+G GKTT   L+   L  K      T EP      ++ R +L      
Sbjct: 1   MNK--FIVFEGIDGCGKTTQAKLIAERLNAK-----FTFEPTDGKIGKSIREIL---SGS 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E  A++FAA R++HV   I   L +  I+  DR++ SS  YQ         F+ ++
Sbjct: 51  KCQKETLALLFAADRVEHVSK-IEEDLKKSHIV-SDRYVYSSIVYQMS-QGIPKDFIYTI 107

Query: 121 QEISVQEVMPDCTIILDLPV----------DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            + +                          +  LKR+++R         + FE+  + I 
Sbjct: 108 NDYAK-------------TPDLVVLLDVDLNEALKRMESREK-------EIFEK--IEIQ 145

Query: 171 EKRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212
           +K ++ +  +  ++ ++        I+D ++ S   V   ILN + + +
Sbjct: 146 KKIKEGYYSLINSENEKFMPTYGFIIIDTTSKSINQVFDEILNAIIDKI 194


>gi|303229617|ref|ZP_07316405.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515742|gb|EFL57696.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a]
          Length = 228

 Score =  140 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 23/230 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T    L   LQ + + V     P     A     + LS      V
Sbjct: 2   GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLSGQFGTDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116
           D       + ++A  R        +    +G I++ DR+  S+  +Q  + +    +  F
Sbjct: 62  DSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKRVQF 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L+ L++          PD   +LD+P+ +    +  R         D  E  + +  +  
Sbjct: 122 LEWLEDFEFVKFGLPRPDAVCLLDVPLVVTESLMSERTGKTGGETGDIHEG-NRVYLQAV 180

Query: 174 RQIFLDIARNQPDRCHIVDSAH----------SFQSVATNILNIVWELVQ 213
              + ++        H +  A           S +S+  +I ++V  +++
Sbjct: 181 HNAYDELVERYQ--WHRISCAQQDKSGTFTMRSIESIHNDIYDVVKRILR 228


>gi|328853928|gb|EGG03063.1| hypothetical protein MELLADRAFT_44639 [Melampsora larici-populina
           98AG31]
          Length = 222

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 83/231 (35%), Gaps = 27/231 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G F+  EG++  GK+T   +L   L      V + R P          H  L+   D 
Sbjct: 5   NRGAFVVIEGLDRCGKSTQCKILADRLTNAGRSVELMRFPDRETVIGKMIHSYLNQESD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117
               A  ++FAA R +      +  L  G  L+CDR+  S  A+   +   +        
Sbjct: 64  LDDHAIHLLFAANRWE------KRHLQSGTTLICDRYAFSGVAFTSAKFQLRTPPQPESF 117

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV------MIHE 171
            SL        +PD  I L +P++  + R             + +E++D+         +
Sbjct: 118 TSLSSPDRGLPLPDLVIFLTMPMEATVTR--------GGFGQERYEKEDLQAEVKRQFEQ 169

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
                F  +      R   ++++ S   V   I   V  L+  ++ P   K
Sbjct: 170 VVEPAFTRLHGQ--GRWVEINASGSIDEVTCRISKTVDRLLGSKLDPAVGK 218


>gi|224372857|ref|YP_002607229.1| thymidylate kinase [Nautilia profundicola AmH]
 gi|254808301|sp|B9L9C1|KTHY_NAUPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|223588410|gb|ACM92146.1| thymidylate kinase [Nautilia profundicola AmH]
          Length = 194

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 17/208 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I LLK   +    ++   +EPG T      R ++ +   D+   
Sbjct: 1   MYIALEGIDTAGKSTQIELLKNEYKN---NILFIKEPGFTKFGTKIREIIFN---DDISK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A R + +E  ++P L   K +L DR + S  AY  E        L +L + +
Sbjct: 55  KAELFLFLADRAETIEKFVKPNL--HKNILTDRSVISGIAYAMEF--FDFNMLVNLNKFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P+  IIL L  +    R+  +         D  E++ +      +   +++    
Sbjct: 111 TDGIFPEFVIILKLDKETLQYRLSQKNH-------DNIEKRGLDYLINIQDNMIEVCNRL 163

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
                ++D++ + + +   I  ++ E +
Sbjct: 164 EIPYLLLDASKNIEEINFRIKKVISEYM 191


>gi|15912289|gb|AAL08278.1| AT5g59440/f2o15_100 [Arabidopsis thaliana]
 gi|19548005|gb|AAL87366.1| AT5g59440/f2o15_100 [Arabidopsis thaliana]
          Length = 224

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 83/212 (39%), Gaps = 19/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK+T  + L  FL    +   + R P    +        LS    + 
Sbjct: 19  RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 77

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +   +++   L  G  L+  R+  S  A+   +     L ++  + 
Sbjct: 78  DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVYRYSYSGVAFSSAKG----LDIEWCKA 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD  + LD+  +   +R             + +ER  V   +K    +  +  
Sbjct: 133 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 182

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +      I++++ + + V   I  +V + V++
Sbjct: 183 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 211


>gi|222445925|ref|ZP_03608440.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435490|gb|EEE42655.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii
           DSM 2375]
          Length = 192

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 28/206 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63
           ++I FEGI+GAGK+T I+LLK +L++  +DV    EP  +   +  R +L       +  
Sbjct: 1   MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +   ++FAA R+     +I   L +  K++L DR   SS AYQ         +++ + +
Sbjct: 61  QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ-----EPAEWIEQINK 110

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +            P  + L  V  + S+   +  D FE +      K +  +LD+  
Sbjct: 111 YAKE------------PDLVLLLDVDVKTSVNRCSKEDEFENE--EFLSKVKANYLDLIS 156

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N       +D++     V+T+I   V
Sbjct: 157 NFNHEI--IDASTGVNKVSTDIKKAV 180


>gi|296273496|ref|YP_003656127.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299]
 gi|296097670|gb|ADG93620.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299]
          Length = 188

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 20/205 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+ AGK+T + +L +       +   T+EPG T      R + L+        
Sbjct: 1   MYVVIEGIDTAGKSTQLEILSKKFS----NAIFTKEPGATKLGSKLREMALNGEAK--SK 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI+P +   K+++ DR + S  AY     S     + +L  I+
Sbjct: 55  IAEMFLFLADRAEHIEEVIKPNID--KMIISDRSVISGIAY---ASSLPIEVVTTLNLIA 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  +P  TI+L+L  D   KR+ N+     ES  +DY     + I  + ++  +D+   
Sbjct: 110 TENTLPSHTILLELSKDELTKRLGNKSNDSIESRGIDYL----IDIQNRMKKT-IDLLSL 164

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
                  +D++ S + +A  I + +
Sbjct: 165 N---YIFIDASLSIEEIAKRIEDFI 186


>gi|310830106|ref|YP_003962463.1| putative thymidylate kinase [Eubacterium limosum KIST612]
 gi|308741840|gb|ADO39500.1| putative thymidylate kinase [Eubacterium limosum KIST612]
          Length = 228

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 82/221 (37%), Gaps = 15/221 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57
           N G  I  EG++G+GK T    L   L+R+   V     P    A+ A   + LS     
Sbjct: 3   NKGQLIVIEGVDGSGKQTQTEKLYDRLKREGQRVMKVSYPRYDKASSAMVRLYLSGAFGN 62

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115
             D       +  +AA R    +        +G I++ DR+  S+  +Q  + S      
Sbjct: 63  DPDSISPYIASTFYAADRYASYKEDYETFYRDGGIVIADRYTTSNMVHQAGKISDPEERV 122

Query: 116 -FLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIH 170
            F+D L +    +    +PD    L++P +I  K ++ R +        D  E+    + 
Sbjct: 123 RFMDWLSDYEFNKMELPVPDAVFFLNIPPEINFKLMEGRANKITGEAEKDIHEKSPEHLL 182

Query: 171 EKRRQIFLDIARNQP--DRCHIVDSA-HSFQSVATNILNIV 208
              +   L++       +   + +    S + +   I   V
Sbjct: 183 HAYQNA-LELIEKYNWTEIVCVSEGKLRSIEDIHEEIYERV 222


>gi|300120775|emb|CBK21017.2| unnamed protein product [Blastocystis hominis]
          Length = 208

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 19/216 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59
           M  G+FI  EG++ +GKT+    +   L  ++        P  T    +     L     
Sbjct: 1   MKRGVFIVIEGVDRSGKTSQCHRIVERLNAEDITAKFYGFPNRTTQIGQQINKYL--QNA 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E       ++F+A R + +   I   L  G  ++CDR++ S  AY   R     L ++ 
Sbjct: 59  TEIENHCVHLLFSANRWE-LSKSILEDLKNGVNIICDRYIASGVAYSVTRG----LDMEW 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     PD T  L+LP++  ++R             +  E +     +   + F  
Sbjct: 114 CIHSDKGLPAPDVTFQLELPIEEQMRRA--------GFGEERLETR--EFQQSVAEAFRR 163

Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           ++    P     V +  S   V   +  +V   +  
Sbjct: 164 LSSEFYPYTWTPVSALGSIDEVHERLYGLVKNAISD 199


>gi|168050195|ref|XP_001777545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671030|gb|EDQ57588.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 226

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 83/212 (39%), Gaps = 19/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK++  + L  +L+ +   V   R P  T A        LSC  D  
Sbjct: 15  RGALIVLEGLDRSGKSSQCAQLASYLESQGVAVEAWRFPDRTTAMGRMISSYLSCQTD-L 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A A  ++F+A R +    ++   L  G  L+ DR+  S  A+   +     L LD  + 
Sbjct: 74  DAAAIHLLFSANRWEKCS-LMESKLKAGTTLVIDRYSYSGVAFSVAKG----LDLDWCKG 128

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD    LD+  ++   R             + +E+  + I +K  ++F  +  
Sbjct: 129 PEAGLPAPDLVFYLDISAEVAAAR--------GGYGGERYEK--LEIQKKVEKVFKSLKD 178

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                   VD+  S  S+ + +     + + +
Sbjct: 179 T---TWQSVDATQSIDSIQSVLREESVKAINE 207


>gi|153951111|ref|YP_001398306.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166221734|sp|A7H476|KTHY_CAMJD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|152938557|gb|ABS43298.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 192

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEGI+  GK+T ISLLK   +    D   T EPGGT   +  R +LL+        
Sbjct: 1   MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H E +++    + K+++ DR   S  AY  +    ++  L +L   +
Sbjct: 56  RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFTLNSFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +++  P   I L    ++  +R+  +        LD  E++ +      +     +    
Sbjct: 111 LEDFFPQKIIFLKGDENLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLKKVLHFL 163

Query: 185 PDR----CHIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S + +   I   + 
Sbjct: 164 KEKISIEILTLDAKESKEKLHQQIKEFLQ 192


>gi|34557029|ref|NP_906844.1| thymidylate kinase [Wolinella succinogenes DSM 1740]
 gi|81653541|sp|Q7M9X1|KTHY_WOLSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|34482744|emb|CAE09744.1| INTEGRAL MEMBRANE PROTEIN WITH KINASE ACTIVITY [Wolinella
           succinogenes]
          Length = 190

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 24/205 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EG++  GK+T I+LLKR           T+EPGGT      R +LL  G +   A
Sbjct: 1   MYVAIEGVDTCGKSTQIALLKRRFPG----AIFTKEPGGTALGMKLRELLL--GGEAKSA 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R +H+E VI+PAL   K+L  DR L S  AY         L+L SL   +
Sbjct: 55  KAELLLFLADRAEHMELVIKPALD--KLLFSDRSLISGMAY---AKGWDELWLKSLNLFA 109

Query: 125 VQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ--IFLDIA 181
            + ++PD  +IL+L   ++  +  Q  +   ES  ++Y     + + E+ +Q    L I 
Sbjct: 110 TEGIVPDKVVILELTAKELSYRLSQKSHDSIESRGVEYL----LELQERIKQMTALLGI- 164

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
              P     + ++ S + +   I++
Sbjct: 165 ---PS--LTLSASLSPEEIHGRIVS 184


>gi|291415046|ref|XP_002723764.1| PREDICTED: thymidylate kinase isoform 1 [Oryctolagus cuniculus]
          Length = 212

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 15/211 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L+   +   + R P  +          L    + 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V   I+  L +G  L+ DR+  S  A+   +   ++  L+  +
Sbjct: 63  VEDHSVHLLFSANRWEQVP-FIKEKLSQGVTLVVDRYAFSGVAFTSAK---ENFSLEWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +     R             + +E +     E+  Q F  + 
Sbjct: 119 QPDVGLPRPDLVLFLQLKLAEAASR--------GEFGCERYESR--AFQERALQGFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R+      +VD++ S + V   I  +  + +
Sbjct: 169 RDPSLNWKMVDASKSIEDVHEEIRALSEDAI 199


>gi|125559330|gb|EAZ04866.1| hypothetical protein OsI_27045 [Oryza sativa Indica Group]
 gi|125601251|gb|EAZ40827.1| hypothetical protein OsJ_25303 [Oryza sativa Japonica Group]
 gi|215769070|dbj|BAH01299.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 253

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 86/223 (38%), Gaps = 25/223 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GK++  + L  FLQ K       R P  GT   +     L      E
Sbjct: 50  RGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYL--ANESE 107

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +    ++   L+ G  L+ DR+  S  A+   +     L ++  +
Sbjct: 108 LDDRTIHLLFSANRWE-KRALMERKLLGGTTLIVDRYSYSGVAFSAAKG----LDIEWCK 162

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD  + LD+  +   +R             + +E+  +   +K  + +  + 
Sbjct: 163 APENGLIAPDLVVYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVGEHYHSLR 212

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI----VWELVQKRVSPLS 220
            +      +VD +   + V   +  +    + E   K+++ L+
Sbjct: 213 DS---TWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLASLA 252


>gi|169334897|ref|ZP_02862090.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257635|gb|EDS71601.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM
           17244]
          Length = 227

 Score =  139 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 86/227 (37%), Gaps = 13/227 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           MN G     EG++G+GK T   L+ + L+ + ++V     P     + A   + L+    
Sbjct: 1   MNKGKLFVIEGLDGSGKQTQSELITKRLKEEGHNVIRASYPNYKSQSSALVKMYLNGDFG 60

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D+   +  +  +A  R    +       + G I++ DR++ S+  +QG +      +
Sbjct: 61  KNADDIDPKVASTFYAVDRYATYKKEYEDFYLNGGIIIADRYVTSNMVHQGCKIKDVEKK 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L +      +   PD    LD+  ++    +++R +   +         D    
Sbjct: 121 EEYLDWLLDFEYNIFKIPKPDKVFFLDIDPEVSKALIKDRDNKFTNESKKDIHESDYEYL 180

Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELVQK 214
               +    +      DR   V  +   S + +   +   + + +++
Sbjct: 181 MSAYENVNFLVDKYGFDRIECVKESSLKSIEEINDILYKKITKDLRR 227


>gi|42528099|ref|NP_973197.1| thymidylate kinase [Treponema denticola ATCC 35405]
 gi|41819144|gb|AAS13116.1| thymidylate kinase [Treponema denticola ATCC 35405]
          Length = 209

 Score =  139 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 27/217 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           F+ FEGI+G+G T+ I LLK   + ++    V  T+EP   P     R  L   G  +  
Sbjct: 6   FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63

Query: 64  AEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DS 119
            E    +FAA R +H+     I   + +G+ +  DR++ SS AYQ    ++    L  D 
Sbjct: 64  PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAADLAKLQNDG 123

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                            DLPVDI + RV  R ++ E         ++     K +  +  
Sbjct: 124 FPLPEFLFFF-------DLPVDISMNRVMGRSNVLEIY-------EEKTFQYKVQDEYKK 169

Query: 180 IARN----QPD-RCHIVDSAHSFQSVATNILNIVWEL 211
           I       +P+    I+++    + +   + +I+ +L
Sbjct: 170 IIDEYRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206


>gi|71030486|ref|XP_764885.1| thymidylate kinase [Theileria parva strain Muguga]
 gi|68351841|gb|EAN32602.1| thymidylate kinase, putative [Theileria parva]
          Length = 213

 Score =  139 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 82/212 (38%), Gaps = 18/212 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I FEGI+ +GK+T I LL + L  +N     +T     TP  +  R   L    + 
Sbjct: 8   RGKLIVFEGIDRSGKSTQIRLLSQKLSEENIKNEVLTFPYKTTPTGKLLRS-YLGNRDES 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +A  ++F+A R + +  +I+  L  G  ++ DR+  S  AY    +       +   
Sbjct: 67  IPKQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAYSVGAEGLDF---NWCL 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 V PD    +DL  +    R         +   + +E  ++   E   ++F    
Sbjct: 123 IPDTGIVEPDIVFYMDLAPECSSAR--------GNFGSEIYE--NLENMENVYEVFKRF- 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                  + + + H    +   I +I  ++++
Sbjct: 172 -GNLSYWNNIKANHDRDQIHEKIYSITKKVIE 202


>gi|291221635|ref|XP_002730837.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 211

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 79/213 (37%), Gaps = 18/213 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG +  GK+T    L   L        + R P  + +        L    + 
Sbjct: 6   RRGALIVLEGCDRCGKSTQARKLVDTLVAGGTPAELWRFPERSSSIGQLIGSYLEKKSE- 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R + V   +R  L +G  ++ DR+  S  A+   ++      ++  +
Sbjct: 65  VEDHAIHLLFSANRWESVPR-MRKLLQDGTTVVVDRYAYSGVAFTAAKEGFD---IEWCK 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +       PD  + L +  +   KR             + +E+ D    ++   ++  + 
Sbjct: 121 QPDRGLPEPDLVLYLTIGAEDAAKRA--------DFGGERYEQTD--FQKRVADMYGLLR 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               DR   +D++ S + +   I  +  +++ +
Sbjct: 171 E---DRWETLDASQSIKDLHDQIAKLTRDIITR 200


>gi|149193824|ref|ZP_01870922.1| thymidylate kinase [Caminibacter mediatlanticus TB-2]
 gi|149135777|gb|EDM24255.1| thymidylate kinase [Caminibacter mediatlanticus TB-2]
          Length = 193

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 19/210 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EGI+ AGK+T I LLK+       +    +EPG T   +  R +LL+   ++   
Sbjct: 1   MYIAIEGIDTAGKSTQIELLKKEF-----NAIFIKEPGFTSFGKKIREILLN---EDISK 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE  +F A R + +E V++P +   K+++ DR + S  AY  E        L +L + +
Sbjct: 53  KAELFLFLADRSETIEEVVKPNIN--KLIISDRSVISGIAYAMEF--FDFDMLVNLNKFA 108

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + P+  IIL L     + R+  +         D  E++ +    K +   +      
Sbjct: 109 TDSIFPEFVIILKLEKKDLIYRLSQKEK-------DSIEKRGIEYLLKIQDNIIATCNRL 161

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                ++D++ + + +   I   +  L+++
Sbjct: 162 EIPYLLLDASKNIEEINFRIKKAISGLIKR 191


>gi|261349531|ref|ZP_05974948.1| dTMP kinase [Methanobrevibacter smithii DSM 2374]
 gi|288861895|gb|EFC94193.1| dTMP kinase [Methanobrevibacter smithii DSM 2374]
          Length = 192

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 28/206 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63
           ++I FEGI+GAGK+T I+LLK +L++  +DV    EP  +   +  R +L       +  
Sbjct: 1   MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +   ++FAA R+     +I   L +  K++L DR   SS AYQ         +++ + +
Sbjct: 61  QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ-----EPAEWIEQINK 110

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +            P  + L  V  + S+   +  D FE +      K +  +LD+  
Sbjct: 111 YAKE------------PDLVLLLDVDVKTSVNRCSKEDEFENE--EFLSKVKANYLDLIS 156

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N       +D++     V+T++   V
Sbjct: 157 NFNHEI--IDASTGVNKVSTDVKKAV 180


>gi|317178179|dbj|BAJ55968.1| thymidylate kinase [Helicobacter pylori F16]
          Length = 191

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ESISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQGVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKIKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I+  + 
Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIIAFIE 188


>gi|167393075|ref|XP_001740414.1| thymidylate kinase [Entamoeba dispar SAW760]
 gi|165895464|gb|EDR23144.1| thymidylate kinase, putative [Entamoeba dispar SAW760]
          Length = 210

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 18/213 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GL I  EGI+ +GK++    +   L++K         P  +          L      
Sbjct: 4   NRGLLIVLEGIDQSGKSSAAQRVCEMLEKKGIQSIKQPFPDRSTDIGKLIDEFLHGKN-- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +   ++++A R + V   I+  L +G  ++CDR+  S   Y       +        
Sbjct: 62  LPQQVVHLLYSANRWE-VAQKIKETLEKGITIICDRYAFSGIVYSIANGLDE----RWCN 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD    L+L ++   +R       R++   D +E  ++    K +  +    
Sbjct: 117 SADSGLPKPDIVFFLELSLEDAEQR-------RKTMKTDRYE--NIKFQSKVKCEYEKF- 166

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                +   +D+  S + VA  I +I+ + + +
Sbjct: 167 -KDSMKWTCIDARQSKEEVALEITSIIEQQLPQ 198


>gi|256419682|ref|YP_003120335.1| thymidylate kinase [Chitinophaga pinensis DSM 2588]
 gi|256034590|gb|ACU58134.1| thymidylate kinase [Chitinophaga pinensis DSM 2588]
          Length = 228

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 19/227 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS--C 57
           N+  FI+ EG++GAGK+T I+LL++F  ++  +      P        E     L     
Sbjct: 3   NNSRFIAIEGLDGAGKSTQINLLQQFFNQQGIETRFVHFPIVQEGVFGEMIAKFLRGEFG 62

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114
            V +   +  A++FA  R     + I   L  G ++L DR++ S+ A+Q  +   D  + 
Sbjct: 63  DVKDVHPQLVALLFAEDRK-AFSHTINEWLASGYVVLVDRYVLSNIAFQCAKLKTDKEKQ 121

Query: 115 LFLDSLQEISV---QEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVM 168
              D +        +   PD ++ LD+P    +  L R ++    +     D    KD  
Sbjct: 122 ELRDWINMFEYEYNRIPQPDLSVYLDVPFSHTEQALARRRSGEDRKYLNGKDDIHEKDFS 181

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWE 210
           +    ++ +  +A        IV     +   S + +   I++ + +
Sbjct: 182 LQLAVKREYEILADTDATVTKIVCYDQDNKMRSVEEIHAAIIHNITK 228


>gi|198417043|ref|XP_002128464.1| PREDICTED: similar to deoxythymidylate kinase [Ciona intestinalis]
          Length = 209

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 86/225 (38%), Gaps = 23/225 (10%)

Query: 1   MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSC 57
           M    G  I  EG++ +GKTT    L   L  KN  V + + P   T   +     L+  
Sbjct: 1   MKVGRGALIVVEGLDRSGKTTQCQKLITALNEKNQKVKLLKFPDRTTEIGKTINSYLVKK 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                   A  ++F+A R +    +++  L +G  L+ DR+  S  A+   +   +   L
Sbjct: 61  SN--LDDRAIHLLFSANRWEKRSEMLQD-LNDGVTLIVDRYAYSGAAFSAAKKGLE---L 114

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D  +        PD  + L+L   +   R             + +E       +K    F
Sbjct: 115 DWCKSPDSGLPQPDLVLFLELSTSVAATR--------GGYGEERYE--TTEFQKKVALNF 164

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLSS 221
             +   +     ++D+      V  ++L+ V + ++K ++ P+ +
Sbjct: 165 HGLKTEE---WKVIDAGRDMFEVHQDMLSFVEKTMEKVKLQPVGT 206


>gi|317179651|dbj|BAJ57439.1| thymidylate kinase [Helicobacter pylori F30]
          Length = 191

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+ENVI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIENVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I   + 
Sbjct: 160 KEKFGCEILELDAQKSVGDLHRQIAAFIE 188


>gi|325474687|gb|EGC77873.1| thymidylate kinase [Treponema denticola F0402]
          Length = 209

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 27/217 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           F+ FEGI+G+G T+ I LLK   + ++    V  T+EP   P     R  L   G  +  
Sbjct: 6   FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63

Query: 64  AEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119
            E    +FAA R +H+     I   + +G+ +  DR++ SS AYQ    ++    L +  
Sbjct: 64  PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAADLAKLQNEG 123

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                            DLPVDI + RV  R ++ E         ++     K +  +  
Sbjct: 124 FPLPEFLFFF-------DLPVDISMNRVMGRSNVLEIY-------EEKTFQYKVQDEYKK 169

Query: 180 IARN----QPD-RCHIVDSAHSFQSVATNILNIVWEL 211
           I       +P+    I+++    + +   + +I+ +L
Sbjct: 170 IIDEYRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206


>gi|308185243|ref|YP_003929376.1| thymidylate kinase [Helicobacter pylori SJM180]
 gi|308061163|gb|ADO03059.1| thymidylate kinase [Helicobacter pylori SJM180]
          Length = 191

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E  R + L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKIGENLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q ++P+  I+L +  + GLK    R SL+    LD  E +        +Q     A   
Sbjct: 107 TQSILPEKIILLVID-EEGLK---QRLSLK---SLDKIENQGTEKLLTIQQKLKTHAYAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +++  S +++   I   + 
Sbjct: 160 KEKFGCEVLELNAKESVKNLHEQITAFIE 188


>gi|19076042|ref|NP_588542.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe 972h-]
 gi|14286144|sp|P36590|KTHY_SCHPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|3192027|emb|CAA19357.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe]
          Length = 210

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 21/211 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVD 60
           N G  I  EG++ +GK+T   LL   L  ++    + + P  T    +     L      
Sbjct: 5   NRGRLIVIEGLDRSGKSTQCQLLVDKLISQHEKAELFKFPDRTTAIGKKIDDYLKES--V 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +   ++F+A R + +   I   + +G   + DR+  S  A+   +     L  +  
Sbjct: 63  QLNDQVIHLLFSANRWETI-QYIYEQINKGVTCILDRYAFSGIAFSAAKG----LDWEWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L++   I   R             + +E+  + + EK  + F  +
Sbjct: 118 KSPDRGLPRPDLVIFLNVDPRIAATR--------GQYGEERYEK--IEMQEKVLKNFQRL 167

Query: 181 ARNQPD---RCHIVDSAHSFQSVATNILNIV 208
            +   +       +D++ S + V + I+++V
Sbjct: 168 QKEFREEGLEFITLDASSSLEDVHSQIVDLV 198


>gi|222823749|ref|YP_002575323.1| thymidylate kinase [Campylobacter lari RM2100]
 gi|254808285|sp|B9KG87|KTHY_CAMLR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|222538971|gb|ACM64072.1| thymidylate kinase [Campylobacter lari RM2100]
          Length = 194

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 20/210 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+FEG++  GK+T I LLK+  +    D   T+EPGG+      R +LL   + +F  
Sbjct: 1   MYIAFEGVDCVGKSTQIELLKKCFK----DAIFTKEPGGSELGVHLRKILLESKM-QFSK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R + ++  I     + K+++ DR   S+ AY   +       L  L   +
Sbjct: 56  KAELLLFLADRANLID--IHLVQNKNKLIISDRSFVSNMAY--AKFDFDQNILFDLNSFA 111

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LDIA 181
                P   + L    ++  +R+  +        LD  E++ V      +      L+I 
Sbjct: 112 TGGFFPQKIVFLHGSKELIEQRLSKKN-------LDSIEKRGVEYFLNIQNALEETLEIL 164

Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWE 210
           + + D +   +D++ S +++   I   + +
Sbjct: 165 KTKIDIKILKLDASLSIENLHEKIKEFIND 194


>gi|270669144|ref|ZP_06222575.1| dTMP kinase [Haemophilus influenzae HK1212]
 gi|270316610|gb|EFA28429.1| dTMP kinase [Haemophilus influenzae HK1212]
          Length = 111

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/109 (45%), Positives = 65/109 (59%), Gaps = 1/109 (0%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI  EG+EGAGK++    + R L      DV  TREPGGTP AE  RH++     + 
Sbjct: 2   KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
              +AE ++  AAR+  VENVI+PALM+GK ++ DR   SS AYQG   
Sbjct: 62  VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGR 110


>gi|326480672|gb|EGE04682.1| thymidylate kinase [Trichophyton equinum CBS 127.97]
          Length = 235

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +  EG++ AGK+T  + L +FL  + ++    R P  T A     +  L  G  +
Sbjct: 11  RRGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYL-RGEIQ 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ +   LD   
Sbjct: 70  LDDHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD    L++  ++   R             + +E   V + +K  ++FL + 
Sbjct: 128 RPEVGLPRPDIWFFLNISTEVAAAR--------GGYGTERYE--TVNLQKKVGKLFLSLT 177

Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +  +   +VD+      ++  I   V + + K
Sbjct: 178 GLKGNEDMRVVDAGREIDEISREIQEEVLQTMAK 211


>gi|308064233|gb|ADO06120.1| thymidylate kinase [Helicobacter pylori Sat464]
          Length = 191

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++G GK+T + LLK   +    +   T+EPGGT   E  R + L+   +    
Sbjct: 1   MYVVLEGVDGVGKSTQVGLLKDRFK----NALFTKEPGGTRMGEHLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+PD  I+L +  +   +R+  +        LD  E +        +Q     A   
Sbjct: 107 TQSVLPDKIILLLIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S   +   I+  + 
Sbjct: 160 KEKFGCEVLELDAQKSVWDLHRQIVAFIE 188


>gi|312067737|ref|XP_003136884.1| thymidylate kinase [Loa loa]
 gi|307767957|gb|EFO27191.1| thymidylate kinase [Loa loa]
          Length = 213

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 13/210 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI FEG +  GK+     L   ++    +V +   P  +          L   V+  
Sbjct: 6   RGAFIVFEGCDRVGKSLQSRKLVERIKATGGNVDLISFPDRSSDLGKFIDRYLKKEVE-M 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +   +VFAA R   +  +++  L +G  L+ DR+  S  AY   +  + ++ ++  + 
Sbjct: 65  EPKEAHLVFAANRQALMPLMVKELL-KGTHLVVDRYAYSGIAYTLAK-GADNVTMEWAKL 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             + E+ PDC I  +L  +   KR             + F+        K   I   +A 
Sbjct: 123 ADMGELKPDCVIYFNLSFEEAQKR--------SGFGDERFDSGS--FQGKVNDIMEKLAA 172

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              D   +VD++   + ++ N+  +V  ++
Sbjct: 173 EDRDLWKVVDASLPIEVISENVWKLVSPIL 202


>gi|315049351|ref|XP_003174050.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
 gi|311342017|gb|EFR01220.1| thymidylate kinase [Arthroderma gypseum CBS 118893]
          Length = 237

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +  EG++ AGK+T  + L +FL  + +     R P  T +     +  L     +
Sbjct: 13  RRGALVVVEGLDRAGKSTQCTRLHQFLVDQGHKAKYIRFPDRTTSIGKMINQYL-RAEIQ 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ +   LD   
Sbjct: 72  LDDHAVHLLFSANRWEAAAQ-IRQDIEAGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 129

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD    L++  ++   R             + +E   V + ++  ++FL ++
Sbjct: 130 RPEVGLPRPDIWFFLNISTEVAAAR--------GGYGTERYE--TVNLQQRVGKLFLSLS 179

Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +  +   IVD+      ++++I + V + + K
Sbjct: 180 GLKGNEDMRIVDAGREMDEISSDIRDEVLQTMTK 213


>gi|14488796|pdb|1E2D|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
           Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
 gi|14488797|pdb|1E2E|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
           Monophosphate, Adenosine Diphosphate,A Magnesium-Ion And
           Alf3
 gi|14488798|pdb|1E2F|A Chain A, Human Thymidylate Kinase Complexed With Thymidine
           Monophosphate, Adenosine Diphosphate And A Magnesium-Ion
 gi|14488799|pdb|1E2G|A Chain A, Human Thymidylate Kinase Complexed With Adp, Tdp And A
           Magnesium-Ion
 gi|14488800|pdb|1E2Q|A Chain A, Human Thymidylate Kinase Complexed With Tp5a And A
           Magnesium-Ion
 gi|16975361|pdb|1E99|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Adp
 gi|16975362|pdb|1E9A|A Chain A, Human Thymidylate Kinase Complexed With The Bisubstrate
           Inhibitor Aztp5a
 gi|16975363|pdb|1E9B|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Appnp
 gi|29726714|pdb|1NMX|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
           And Adp
 gi|29726716|pdb|1NMZ|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Nh2tmp
           And Appnhp
 gi|29726717|pdb|1NN0|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
           And Adp
 gi|29726718|pdb|1NN1|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp
           And Appnhp
 gi|29726719|pdb|1NN3|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
           Adp
 gi|29726720|pdb|1NN5|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp +
           Appnhp
          Length = 215

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 7   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 66  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 172 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELW 214


>gi|49456925|emb|CAG46783.1| DTYMK [Homo sapiens]
          Length = 212

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHSAHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211


>gi|261838748|gb|ACX98514.1| thymidylate kinase [Helicobacter pylori 51]
          Length = 191

 Score =  138 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LTRAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+P+  I+L +  +   +R+  +        LD  E +        +Q     A   
Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKAHAYAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S   +   I   + 
Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188


>gi|217033894|ref|ZP_03439318.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10]
 gi|216943657|gb|EEC23102.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10]
          Length = 191

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E + +     I +K +     +
Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLKN-------LDKIENQGIEKLLTIQQKLKTHTYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I   + 
Sbjct: 160 KEKFGCEILELDAQKSVGDLHRQIAAFIE 188


>gi|188587973|ref|YP_001919632.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43]
 gi|188498254|gb|ACD51390.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43]
          Length = 225

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 79/225 (35%), Gaps = 13/225 (5%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57
           M  G  I  E G + +GK T    L   L  + Y++     P     A     + LS   
Sbjct: 1   MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSGEF 60

Query: 58  --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113
               ++  A   +  FA  R        +     G I++ DR+  S+  +Q  +  +  +
Sbjct: 61  GNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMDEEEK 120

Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L  +        +PDC + LD+  +I  K +++R +             +    
Sbjct: 121 DKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDRNNKFTGEKEKDIHENNKDYL 180

Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELV 212
            K     L+IA     D+    D     + + +   I   V   +
Sbjct: 181 AKSYYNSLEIAERYNWDKIKCNDGDNLKTIEEIHEEIYKKVKNYI 225


>gi|296122456|ref|YP_003630234.1| thymidylate kinase [Planctomyces limnophilus DSM 3776]
 gi|296014796|gb|ADG68035.1| thymidylate kinase [Planctomyces limnophilus DSM 3776]
          Length = 236

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 22/232 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGV- 59
           +SGL I  EGI+GAGK T   LL   L+  + DV     P         R    L+    
Sbjct: 10  SSGLLIVIEGIDGAGKGTQTKLLHERLKSTSRDVFTLSFPRYESTFFGQRVADFLNGRFG 69

Query: 60  --DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSS 112
             ++      A+++A  R +   ++++ AL EGKI+LCDR++ S+ A+Q  +      + 
Sbjct: 70  TLEQVHPFLAAMLYAGDRFES-RDLLQSALNEGKIVLCDRYIPSNLAHQLTKAQPELRAE 128

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFERKDVMI 169
              +++ ++    Q   PD  ++LD   +     + R Q R      A L      D   
Sbjct: 129 MQQWIEHVEYHLYQMPRPDLVVLLDTTAETATTLIDRKQARDYTTSKADL---HEADQHY 185

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAH-----SFQSVATNILNIVWELVQKRV 216
            E+    + ++A N P   H+V         S   +A  I   V   + +R+
Sbjct: 186 LERVLIEYRNLAANNPL-WHVVPCLQNSILRSQTEIAEEIYTFVESFISRRI 236


>gi|251779252|ref|ZP_04822172.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243083567|gb|EES49457.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 225

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 79/225 (35%), Gaps = 13/225 (5%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57
           M  G  I  E G + +GK T    L   L  + Y++     P     A     + LS   
Sbjct: 1   MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSGEF 60

Query: 58  --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113
               ++  A   +  FA  R        +     G I++ DR+  S+  +Q  +  +  +
Sbjct: 61  GNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMDEEEK 120

Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L  +        +PDC + LD+  +I  K +++R +             +    
Sbjct: 121 DKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDRNNKFTGEKEKDIHENNKDYL 180

Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELV 212
            K     L+IA     D+    D     + + +   I   V   +
Sbjct: 181 AKSYYNSLEIAERYNWDKIKCNDGDSLKTIEEIHEEIYKKVKNYI 225


>gi|148642580|ref|YP_001273093.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061]
 gi|166987705|sp|A5UKJ7|KTHY_METS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|148551597|gb|ABQ86725.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061]
          Length = 192

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 28/206 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63
           ++I FEGI+GAGK+T I+LLK +L +  +DV    EP  +   +  R +L       +  
Sbjct: 1   MYIVFEGIDGAGKSTQINLLKDWLDQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +   ++FAA R+     +I   L +  K++L DR   SS AYQ         +++ + +
Sbjct: 61  QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ-----EPAEWIEQINK 110

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + +            P  + L  V  + S+   +  D FE +      K +  +LD+  
Sbjct: 111 YAKE------------PDLVLLLDVDVKTSVNRCSKEDEFENE--EFLSKVKANYLDLIS 156

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
           N       +D++     V+T+I   V
Sbjct: 157 NFNHEI--IDASTGVNKVSTDIKKAV 180


>gi|187934501|ref|YP_001884434.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B]
 gi|187722654|gb|ACD23875.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B]
          Length = 225

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 80/225 (35%), Gaps = 13/225 (5%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57
           M  G  I  E G + +GK T    L   L  + Y++     P     A     + LS   
Sbjct: 1   MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSGEF 60

Query: 58  --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113
               ++  A   +  FA  R        +     G I++ DR+  S+  +Q  +  +  +
Sbjct: 61  GNKPEDVNAYVASTFFAIDRFASYNKEWKDFYDNGGIIISDRYTTSNMVHQAVKMDEEEK 120

Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L  +        +PDC + LD+  +I  K +++R +             +    
Sbjct: 121 DKYLDWLYNLEFNLYKLPIPDCVMFLDVLPEISQKLMKDRNNKFTGEKEKDIHENNKDYL 180

Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELV 212
            K     L+IA     D+    D     + + +   I   V + +
Sbjct: 181 AKSYYNSLEIAEKYNWDKIKCNDGDNLKTIEEIHEEIYKKVKKYI 225


>gi|29726715|pdb|1NMY|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp
           And Appnhp
          Length = 209

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 1   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 60  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 116 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 165

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 166 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELW 208


>gi|320169555|gb|EFW46454.1| deoxythymidylate kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 210

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 21/215 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           +  G  I FEG + +GK+T   +L   L+     V   R P   TP  +     L     
Sbjct: 6   LARGALIVFEGCDRSGKSTQCLMLVERLKALGKRVQHLRFPDRSTPTGQKINAYL--ANA 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E   +    +F+  R + V +++  AL  G  L+ DR+  S  A+   +     L L+ 
Sbjct: 64  SEMQDDKIHQLFSENRWEAVPSMLE-ALKNGTTLVVDRYAFSGVAFSSAKG----LDLEW 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            ++       PD  I LD+P++  +KR             + +E +     EK    +  
Sbjct: 119 CKKPDAGLPAPDAVIYLDIPIEAAMKR--------GDFGNERYETR--AFQEKVAAQYKK 168

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +    P    ++D+      +  +I NI  +++  
Sbjct: 169 L--QTPS-WMMMDARLPIDQLQADIFNIASKVIAD 200


>gi|27261100|dbj|BAC45213.1| putative thymidylate kinase [Oryza sativa Japonica Group]
          Length = 213

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 86/223 (38%), Gaps = 25/223 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GK++  + L  FLQ K       R P  GT   +     L      E
Sbjct: 10  RGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYL--ANESE 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +    ++   L+ G  L+ DR+  S  A+   +     L ++  +
Sbjct: 68  LDDRTIHLLFSANRWE-KRALMERKLLGGTTLIVDRYSYSGVAFSAAKG----LDIEWCK 122

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD  + LD+  +   +R             + +E+  +   +K  + +  + 
Sbjct: 123 APENGLIAPDLVVYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVGEHYHSLR 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI----VWELVQKRVSPLS 220
            +      +VD +   + V   +  +    + E   K+++ L+
Sbjct: 173 DS---TWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLASLA 212


>gi|154148244|ref|YP_001406485.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381]
 gi|166221733|sp|A7I1U4|KTHY_CAMHC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|153804253|gb|ABS51260.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381]
          Length = 195

 Score =  137 bits (347), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 14/207 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I FEGI+G GK+T I LLK    +   +  +T+EPGGT   E  R +LL     +   
Sbjct: 1   MLIFFEGIDGVGKSTQIELLKSVYNK---NYLITKEPGGTLLGEKLREILLESDF-KISK 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123
            AE  +F A R +H E V++    + K ++CDR   S  AY    + +     L +L +I
Sbjct: 57  TAELFLFLADRAEHFEKVLK--FSDKKDIICDRSFVSGIAYALANEQNLDINDLINLNKI 114

Query: 124 SVQEVMPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++   +P+   I L +  D    R++NR +       D  E + +    K ++   +I +
Sbjct: 115 ALGGKIPNAKFIFLKISKDNLRFRLENRGNF------DKIEERGLEYLMKVQKNMSEIFK 168

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209
                   +D+      +   I   V 
Sbjct: 169 ILKIDALEIDANGDINEIHKKIKEFVK 195


>gi|42544174|ref|NP_036277.2| thymidylate kinase isoform 1 [Homo sapiens]
 gi|114584335|ref|XP_001161768.1| PREDICTED: deoxythymidylate kinase (thymidylate kinase) isoform 3
           [Pan troglodytes]
 gi|56405325|sp|P23919|KTHY_HUMAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|12804775|gb|AAH01827.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
 gi|49456983|emb|CAG46812.1| DTYMK [Homo sapiens]
 gi|62822371|gb|AAY14920.1| unknown [Homo sapiens]
 gi|119591690|gb|EAW71284.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_b [Homo
           sapiens]
 gi|187955102|gb|AAI47007.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
 gi|187955947|gb|AAI47011.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
          Length = 212

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211


>gi|291544985|emb|CBL18094.1| thymidylate kinase [Ruminococcus sp. 18P13]
          Length = 234

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 87/225 (38%), Gaps = 19/225 (8%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--- 56
           M+  G  I  +G++G GK+T   LL + +++    V     P     + A   + L+   
Sbjct: 1   MHKPGKLIVLDGLDGCGKSTQFQLLSQRMEQAGIPVLPISFPDYDHPSSALVKLYLNGEI 60

Query: 57  -CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113
                +  A A +  +A  R    +        +G  +L  R++ S+  +Q  +      
Sbjct: 61  SPHAGDVNAYAASSFYAVDRYASYKRCWEQPYQQGTTILASRYVTSNAIHQMSKLPRQEW 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +L+ L       ++   PD  + LD+PV    K + +RY   E+   D  E  DV   
Sbjct: 121 DDYLEWLSAYEYDKLELPRPDLVLFLDMPVSAAQKLLCDRYGGDETKK-DIHES-DVAYM 178

Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWE 210
           E+ R     +   Q     ++    D+   + + +   +  +V E
Sbjct: 179 ERCRDA--ALYAAQQQGWQVIPCSRDAQPLTVEEIGDRVWKVVCE 221


>gi|315585861|gb|ADU40242.1| thymidylate kinase [Helicobacter pylori 35A]
          Length = 191

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKNRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPEKIILLMIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKIKTHAYTL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I   + 
Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188


>gi|33303857|gb|AAQ02442.1| deoxythymidylate kinase [synthetic construct]
 gi|54696972|gb|AAV38858.1| deoxythymidylate kinase (thymidylate kinase) [synthetic construct]
          Length = 213

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211


>gi|60831889|gb|AAX36988.1| deoxythymidylate kinase [synthetic construct]
          Length = 213

 Score =  137 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211


>gi|308183576|ref|YP_003927703.1| thymidylate kinase [Helicobacter pylori PeCan4]
 gi|308065761|gb|ADO07653.1| thymidylate kinase [Helicobacter pylori PeCan4]
          Length = 191

 Score =  137 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EG++G GK+T + LLK   +    +  VT+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVALEGVDGVGKSTQVGLLKDRFK----NALVTKEPGGTKIGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E ++++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKRLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+PD  I+L +  +   +R+  +        LD  E +        +Q     A   
Sbjct: 107 TQSVLPDKIILLLIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S   +   I   + 
Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188


>gi|195121060|ref|XP_002005039.1| GI19275 [Drosophila mojavensis]
 gi|193910107|gb|EDW08974.1| GI19275 [Drosophila mojavensis]
          Length = 211

 Score =  137 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 18/212 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G FI FEG +  GK+T  + L   L+ K         P   T   +     L +    
Sbjct: 5   KRGAFIVFEGCDRVGKSTQSNQLCERLKEKGIAAKKINFPNRSTIIGDVINRFLKN--TQ 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   E   ++F+A R + + + I+  L+ G  ++CDR+  S   Y   +     L LD  
Sbjct: 63  ELSHEVIHLLFSANRWECMSS-IQADLLAGTTIICDRYAYSGVVYSVAKG----LDLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +  + PD    L    D    R         S   + +E+  + +  K   +F   
Sbjct: 118 WAPDLGLLKPDAVFYLKANPDQLASR--------GSFGNERYEK--LELQRKVSDLFDHF 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +    H  D+  + Q + + I  I   L+
Sbjct: 168 NEKESSYWHQFDAFETEQELHSKISTIAENLL 199


>gi|281209668|gb|EFA83836.1| thymidylate kinase [Polysphondylium pallidum PN500]
          Length = 219

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 81/214 (37%), Gaps = 19/214 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G+FI FEG +  GK+T +  L   L           R P  T       +  L    
Sbjct: 13  MKRGIFILFEGADRVGKSTQVQSLFGHLSTTLGLPTKQLRFPDRTTQTGTIINSYLQNST 72

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A  ++F+A R +  + +++  L EG  L+ DR+  S  AY   +     +  D 
Sbjct: 73  -QLDDRALHLLFSANRWESKDTLLKH-LNEGNSLVVDRYSYSGVAYSAAKG----IDFDW 126

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     PD    L +  +   KR             + +E+  V   +K ++++  
Sbjct: 127 CFGCEKGLPAPDLIFYLKMDTEDATKR--------GDYGNERYEK--VDFQKKIKEVYE- 175

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            ++      +++++    + V+  I  IV   ++
Sbjct: 176 -SKLVNSSWNVINANRPIEEVSKEINEIVDRSIK 208


>gi|66804303|ref|XP_635930.1| thymidylate kinase [Dictyostelium discoideum AX4]
 gi|74851984|sp|Q54GN2|KTHY_DICDI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|60464271|gb|EAL62422.1| thymidylate kinase [Dictyostelium discoideum AX4]
          Length = 222

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 81/216 (37%), Gaps = 21/216 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           +  GLFI FEG++  GK+T +  L   +   +       R P   TP  +     L    
Sbjct: 16  IKRGLFILFEGVDRVGKSTQVQSLTNHISNVQKLPTKSLRFPDRTTPIGQIINQYL--QN 73

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                  A  ++F++ R +   + I   L  G  ++ DR+  S  AY   +     +  D
Sbjct: 74  ATNMDDRALHLLFSSNRWE-ARDSILELLNNGTNIVVDRYSYSGVAYSAAKG----IDFD 128

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                      PD    L +  +   KR             + +E+  +   +K +QI+ 
Sbjct: 129 WCYACEKGLPKPDLIFYLSMSSEDATKR--------GEYGGERYEK--LEFQKKIKQIYE 178

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  +   D+  I+++  S   ++  I +I     +K
Sbjct: 179 E--KLVDDQWKIINANRSIDEISNEISSIFDSEFKK 212


>gi|206603547|gb|EDZ40027.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG']
          Length = 229

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62
           G  I+ EG +G+GKTT   LLK F + +   V +         AE  R  +      +  
Sbjct: 9   GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVL----SPCNTAELIRGAISKLKERNTL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                  ++AA  +D  E+VI PAL  GK+++ ++++ + +A    R   Q    D +++
Sbjct: 65  DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------RKDVMI---H 170
           +    + P  T  LD+  +  L R+Q  +  R+    DY+E         RK        
Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYEAGMDLNLANRKKDSFVIYQ 178

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           ++  +I+ ++A    D    VD+    Q     +   + ++++ R     S+
Sbjct: 179 KRLIEIYREMA--LSDGFETVDAMKPIQLQQLELRQSISQILRNRSRRKGSR 228


>gi|304438544|ref|ZP_07398483.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368382|gb|EFM22068.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 231

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 76/227 (33%), Gaps = 19/227 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           M  G     E  +G+GK T   LL + L R+ + V     P     A     + L     
Sbjct: 1   MARGKLFIIEAGDGSGKETQTRLLTQRLIREGHRVRAVAFPDYAADASMPVRMYLRGDFG 60

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              DE    A +  FA  R        R     G I+L DR+  S+  +Q  +      +
Sbjct: 61  TQADEVNPYAASTFFAVDRYASYRMKWREDYAAGTIILADRYTTSNMVHQAVKIGDAAER 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FLD L +     +   +PD    LD+      +R+    +  +    D  ER D    
Sbjct: 121 DAFLDWLYDFEFNKLGLPVPDAVFFLDMEP-CAAERLIAARAQVKGETPDIHER-DADYL 178

Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212
            +    ++ +A         +    D      + +   +   V + +
Sbjct: 179 RRTHDAYVLLAARCG--WVRIPSSADGTPLPIEEIHERLYAEVGKFL 223


>gi|109948201|ref|YP_665429.1| thymidylate kinase [Helicobacter acinonychis str. Sheeba]
 gi|123173187|sp|Q17V96|KTHY_HELAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|109715422|emb|CAK00430.1| tmk [Helicobacter acinonychis str. Sheeba]
          Length = 191

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+G GK+T I LLK   Q    +   T+EPGGT   E  RH+ L    +    
Sbjct: 1   MYVVLEGIDGVGKSTQIELLKSAFQ----NALFTKEPGGTKIGETLRHIALH---ENLSE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q ++P   I+L +  +   +R+  +        LD  E + V      +Q F   A   
Sbjct: 107 TQSILPAKIILLWIDKEGLKERLSLK-------SLDKIENQGVEKLLHIQQKFKTHAYAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +++  + +++   I   + 
Sbjct: 160 KEQFGCEVLELNAKENAKNLHERISAFIQ 188


>gi|317182679|dbj|BAJ60463.1| thymidylate kinase [Helicobacter pylori F57]
          Length = 191

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +        T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKGRFKS----ALFTKEPGGTRMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPEKIILLMIDKEGLKQRLSLK-------SLDKIENQGTERLLTIQQKIKAHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I   + 
Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188


>gi|21233354|ref|NP_639271.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66770317|ref|YP_245079.1| thymidylate kinase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|188993513|ref|YP_001905523.1| thymidylate kinase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|23821764|sp|Q8P3Y6|KTHY_XANCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|81303736|sp|Q4UPG4|KTHY_XANC8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621847|sp|B0RXV1|KTHY_XANCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|21115188|gb|AAM43153.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66575649|gb|AAY51059.1| thymidylate kinase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|167735273|emb|CAP53487.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 227

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 39/233 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L++    V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARSLATLLEQAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ E  +    R +HVE +I PAL  G+I++ DR+  S  AYQG         L +  +
Sbjct: 65  SAQDEVDLLLRDRREHVEALIAPALARGEIVILDRYFPSMVAYQGAAGLPLDALLAA-ND 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDLLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + R IF  +    P + H++D++    SV      +V   +  R+   ++  D
Sbjct: 163 RCRAIFAAL--QLPGK-HVIDASADADSVLRQAHAVVVAALADRLRVGATHTD 212


>gi|269123831|ref|YP_003306408.1| thymidylate kinase [Streptobacillus moniliformis DSM 12112]
 gi|268315157|gb|ACZ01531.1| thymidylate kinase [Streptobacillus moniliformis DSM 12112]
          Length = 223

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 84/222 (37%), Gaps = 13/222 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T    L   L     +V     P     A     + LS       
Sbjct: 2   GKLIIIEGTDGSGKQTQTQKLYNRLVNNGINVKKISFPNYNSDASVLVKMYLSGKFGSKP 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116
            +  A   +  +   R    +       +   +++ DR+  S+  + G +   +     +
Sbjct: 62  TDVNAYTASTFYGIDRYASYKLEWEIEYLSDYVIISDRYTGSNMIHHGSKIDDEIEKEKY 121

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L+ L+++   +     PD TI L++P++     ++NR +            +D    +K 
Sbjct: 122 LNWLEDLEFNKFELPRPDLTIFLNVPIEYTFNLMKNRDNKFTGDSKKDIHERDEEYLKKS 181

Query: 174 RQIFLDIARNQPDRCH--IVDSA-HSFQSVATNILNIVWELV 212
               L+IAR +  +    +VD+   S   +   I + V EL+
Sbjct: 182 YYNALNIAREKNWKIINCVVDNNMLSIDDIHELIYDEVKELL 223


>gi|297669947|ref|XP_002813145.1| PREDICTED: thymidylate kinase-like isoform 1 [Pongo abelii]
          Length = 212

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E +     E+    F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYENR--AFQERALWCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           R+      +VD++ S ++V  +I     +++    +K +  L 
Sbjct: 169 RDTTLNWKMVDASKSIEAVHEDIRMLSEDVICTATEKPLGELW 211


>gi|85057354|ref|YP_456270.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789459|gb|ABC65191.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 210

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 7/187 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I  +++ LQ++  +V   R  G +    + R   L+   +    
Sbjct: 2   KLIIFEGLDGSGKTSLIKSVQQELQKQGNEVVAIRGLGSSTIGNSIRETFLT--HNTLHN 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +  A  + + E  I+P L   KI+L  R+L S++AY+         +      +S
Sbjct: 60  LTRYFLSFANMIQNQEESIKPHLQTNKIILVKRWLGSNFAYRVYPSKIDKNY-HIFNNLS 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            + + P+ TI L +   +GL+R  N+ +      LD  E   +   ++  + + +  +NQ
Sbjct: 119 KKFIKPNITIYLKIHPQLGLERKINQKNH----QLDVIETSSLTYFQQVEKGYFEFLKNQ 174

Query: 185 PDRCHIV 191
                I+
Sbjct: 175 NLGTKII 181


>gi|291514468|emb|CBK63678.1| thymidylate kinase [Alistipes shahii WAL 8301]
          Length = 228

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 27/233 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60
           +FI  EG++GAGK+T I +L++ L  +  +   VH  R          AR +     GV+
Sbjct: 1   MFIVLEGLDGAGKSTQIRMLRQLLAERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVN 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114
           E      A++FA  R       IR  + EGK ++ DR++ S+  +Q      GER     
Sbjct: 61  EVDPYLVALLFAGDRA-AAGPQIRAWIAEGKAVVLDRYVYSNVGFQCAKLPAGERRDRLA 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-----RKD-VM 168
            ++  L+        PD ++ LD+P        +    +RE    DY +      +D + 
Sbjct: 120 QWILDLEFGYNDLPRPDLSLFLDVPFAFTE---RKLTEVREGDDRDYLQGSRDIHEDALD 176

Query: 169 IHEKRRQIFLDIARNQPDRCHIVD------SAHSFQSVATNILNIVWELVQKR 215
           +  + R+++L  A    D   +VD      +  S +     I  ++  ++  R
Sbjct: 177 LQRRVREVYLAAAAKD-DSLRVVDCSDPSGAMGSPEHNFEKIRAVLAPILDAR 228


>gi|124516693|gb|EAY58201.1| Thymidylate kinase [Leptospirillum rubarum]
          Length = 229

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 25/225 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62
           G  I+ EG +G+GKTT   LLK F + +   V +         AE  R  +      +  
Sbjct: 9   GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVL----SPCNTAELIRGAISKLKERNTL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                  ++AA  +D  E+VI PAL  GK+++ ++++ + +A    R   Q    D +++
Sbjct: 65  DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------RKDVMI---H 170
           +    + P  T  LD+  +  L R+Q  +  R+    DY+E         RK        
Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYEAGMDLNLANRKKDSFVIYQ 178

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++  +I+ ++A    D    VD+    Q     +   + ++++ R
Sbjct: 179 KRLIEIYREMA--LSDGFETVDAMKPIQLQQLELRQSISQILRNR 221


>gi|254779984|ref|YP_003058091.1| thymidylate kinase [Helicobacter pylori B38]
 gi|254001897|emb|CAX30150.1| Thymidylate kinase (dTMP kinase) [Helicobacter pylori B38]
          Length = 191

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKNRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSEFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q ++P+  ++L +  + GLK    R SL+    LD  E +     + I +K +     +
Sbjct: 107 TQSILPEKIVLLVID-EEGLK---QRLSLK---SLDKIENQGTEKLLTIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S +++   I   + 
Sbjct: 160 REKFGCEVLELDAKESVKNLHEQITAFIE 188


>gi|297380671|gb|ADI35558.1| thymidylate kinase [Helicobacter pylori v225d]
          Length = 191

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +  VT+EPGGT   E  RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALVTKEPGGTRMGEHLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q V+P+  I+L +  +   +R+  +        LD  E +        +Q     A   
Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S   +   I+  + 
Sbjct: 160 KEKFGCEVLELDAQKSVWDLHRQIVAFIE 188


>gi|226529697|ref|NP_001150303.1| LOC100283933 [Zea mays]
 gi|195638226|gb|ACG38581.1| thymidylate kinase [Zea mays]
          Length = 255

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 86/219 (39%), Gaps = 20/219 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  +  EG++ +GKT+  + L  FL+ K Y+      P    +        L+    + 
Sbjct: 52  RGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWSFPDRATSVGQMISSYLA-NDSQL 110

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +    ++   L+ G  L+ DR+  S  A+   +     L ++  + 
Sbjct: 111 DDRTIHLLFSANRWE-KRALMESKLLSGTTLIVDRYSYSGVAFSAAKG----LDIEWCKA 165

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD  I LD+  +   +R             + +E+  +   +K  + +  +  
Sbjct: 166 PENGLIAPDLVIYLDVQPEKAAER--------GGYGDERYEK--IEFQKKVAEHYHSLCD 215

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLS 220
           +      +VD     ++V   + ++    +Q  + +PL+
Sbjct: 216 S---TWKVVDGFLPMETVEERLRDLATSCIQDCQGNPLT 251


>gi|307202789|gb|EFN82074.1| Thymidylate kinase [Harpegnathos saltator]
          Length = 209

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 20/214 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG + AGK+T + LL   L  ++     +  P   TP        L      
Sbjct: 4   KRGALIVLEGCDRAGKSTQVKLLTNALNERSIPTKASAFPNRNTPIGGLLNGFL--SKEI 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EA  ++F+A R +  +  I   L+ G  L+ DR+  S  AY           L+  
Sbjct: 62  NIPPEAAHLLFSANRWE-CKEDIEKMLLSGTTLVIDRYASSGTAYTAANTG---RCLNWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  +    PDC ++L +         +++  LR +   + FE+ D+    +    +  +
Sbjct: 118 KQPDLGLPKPDCVMLLKVS--------KHQQELRNNWGEERFEQNDL--QVRVSANYEKL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              + D    VD+  +  ++   IL     ++Q+
Sbjct: 168 ---KDDTWMTVDADQNVLTIHGEILKKALSVIQE 198


>gi|50288903|ref|XP_446881.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526190|emb|CAG59814.1| unnamed protein product [Candida glabrata]
          Length = 218

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 14/215 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++  GKTT +  L   L+     V   + P          +  L+    + 
Sbjct: 5   RGKLILIEGLDRTGKTTQVDALAERLRGCGLKVVAAKFPNRESEIGQLINRYLTNRDFQL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +A  ++F+A R +++E + +  L +G  ++ DR++ S  AY   +  +  + L    +
Sbjct: 65  PDQAVHLLFSANRWEYIEEL-KQQLNDGYCVVLDRYVFSGVAYSAAK-GTPGMDLQWCLQ 122

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-- 180
                + PD T+ L    +   + + NR    E    + +E  D     K +Q F +   
Sbjct: 123 PDKGLLKPDLTLFL---TNEDRESIANRAGFGE----ERYE--DSDFQLKVKQKFHEAFH 173

Query: 181 ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQK 214
           A  Q      V+ +    + V+  I +++  L+ +
Sbjct: 174 AYCQEGELRTVNVTGKGIEQVSAEIWDVIEPLLHE 208


>gi|317010152|gb|ADU80732.1| thymidylate kinase [Helicobacter pylori India7]
          Length = 191

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKIGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q ++P+  I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSILPEKIILLVIDKESLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +++  S +++   I   + 
Sbjct: 160 REKFGCEVLELNAKESVKNLHEQITAFIK 188


>gi|196015603|ref|XP_002117658.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
 gi|190579827|gb|EDV19916.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens]
          Length = 211

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 82/214 (38%), Gaps = 20/214 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
           N G  I  EG +  GK+T   +L   L        + + P   TP  + A   L      
Sbjct: 6   NRGALIIIEGGDRTGKSTQSKMLVDALLADGKQAELVKFPDRTTPIGKLAGSYL--QKTL 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A  ++F+A R + V ++I   L  G  L+ DR+  S  AY   +       ++  
Sbjct: 64  DLEDHAIHLIFSANRWEKVPSIIE-RLENGITLVVDRYAFSGVAYTSAKRGFD---IEWC 119

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++       PD  I L LPVD    R        +    + +E       ++  + F  +
Sbjct: 120 KQSDTGIPAPDLVIYLTLPVDQATSR--------DQYGTERYEST--QFQKRAVENFEKL 169

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                     +D++ S  ++   + ++  E++Q+
Sbjct: 170 MTKN---WTTLDASQSIDAIHQQMKDLTTEIMQQ 200


>gi|299745593|ref|XP_001831821.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
 gi|298406658|gb|EAU90004.2| thymidylate kinase [Coprinopsis cinerea okayama7#130]
          Length = 237

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 46/212 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  EG++ +GKTT  +LL+  L+ +      + + P  T          L    +    
Sbjct: 11  FIVIEGLDRSGKTTQTALLQSRLESELGASTKLMKFPDRTTTIGQMIDSYLKSDSE-LDD 69

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---------QGERDSSQHL 115
               ++F+A R + + + I   L EG ++LCDR+  S  A+          G  +S   L
Sbjct: 70  HVIHLLFSANRWE-LASTIERLLNEGTVVLCDRYAFSGIAFSASKVVPERSGSGESVPKL 128

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             +  +   +    PD  + LD+  +   +R                             
Sbjct: 129 PFEWCRAPDIGLPAPDLVLFLDIAPEQAKQRG---------------------------- 160

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
            + +      +R  ++D+    +SVA ++ N 
Sbjct: 161 GYGE------ERWRVIDAGRDVESVAADLWNA 186


>gi|197294444|ref|YP_001798985.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853771|emb|CAM11700.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 209

 Score =  136 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 7/178 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKTT I  +K  LQ +N +V   +  G +      R + L+   +    
Sbjct: 2   KIIIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLT--HENLDN 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   ++  +  +   E  I P +   KI+L DR+L S++AY+     ++  +      + 
Sbjct: 60  QTRLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY-QIFYNLF 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + PD T+ L    +IG+ R + + + +    LD  E   +   +K  Q + +  +
Sbjct: 119 NRFIKPDMTVYLKTNPEIGINRKRTQSNHK----LDVIESSPISYFKKVEQGYDEFLK 172


>gi|208435342|ref|YP_002267008.1| thymidylate kinase [Helicobacter pylori G27]
 gi|238057700|sp|B5Z993|KTHY_HELPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|208433271|gb|ACI28142.1| thymidylate kinase [Helicobacter pylori G27]
          Length = 191

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKTRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180
            Q ++P+  I+L +  +   +R+  +        LD  E + +     I +K +     +
Sbjct: 107 TQSILPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQQKIKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S +++   I   + 
Sbjct: 160 KEKFGCEVLELDAKESAKNLHEKIAAFIE 188


>gi|126338564|ref|XP_001362301.1| PREDICTED: similar to Chain A, Wild Type Human Thymidylate Kinase
           Complexed With Aztmp And Adp [Monodelphis domestica]
          Length = 212

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 17/213 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ AGKTT    L   L +  +   + R P   T   +     L      
Sbjct: 4   RRGALIVLEGMDRAGKTTQGRKLVAALLQSGHPAELLRFPERSTEIGKLLGSYL--EKKK 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   ++F+A R + V  +I+  L  G  L+ DR+  S  A+   +   ++  LD  
Sbjct: 62  NMEDHTVHLLFSANRWEQVP-LIKEKLSRGVTLVVDRYAFSGVAFTSAK---ENFSLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L      KR             + +E  +    EK  Q F  +
Sbjct: 118 KQPDVGLPKPDVILFLQLSSVEAAKR--------GDFGNERYE--NNTFQEKALQRFYQL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            ++       +D++ + + +   I ++  E +Q
Sbjct: 168 MKDDSLNWKTIDASKNIEDLHKEIYSLSEETIQ 200


>gi|291522522|emb|CBK80815.1| thymidylate kinase [Coprococcus catus GD/7]
          Length = 223

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 79/219 (36%), Gaps = 21/219 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DE 61
            FI  EG +G+GK T   LL   +  K  D      P     + A     L+      D+
Sbjct: 2   KFIVIEGNDGSGKATQSQLLLETMLEKGIDARKLSFPNYQSDSSALVKGYLAGRYGKRDD 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDS 119
               A A  +AA R+       +    +GK+++ DR+  S+  YQ        +  FL  
Sbjct: 62  ISPYAAASFYAADRIASYMEDWKRDYEKGKLIIADRYTTSNAIYQCARLPRMRRRRFLQW 121

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L E     +    PD  I LD+  DI ++ ++ R   ++         +D     +  + 
Sbjct: 122 LYEYEYDLLGLPEPDMVIYLDVDPDISMQLIEQRGEKKD------IHEEDAEYMRQVHEA 175

Query: 177 FLDIARNQPDRCHIVDSAH-----SFQSVATNILNIVWE 210
               AR        ++          + +   I++ + +
Sbjct: 176 SKFCARK--GGWERINCCKDGKILPPERIHEMIMDAILD 212


>gi|330836556|ref|YP_004411197.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374]
 gi|329748459|gb|AEC01815.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374]
          Length = 215

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++G+G TT    +  +L      V  T EP G P     R  L    V      A
Sbjct: 10  IVLEGLDGSGTTTQSERICHWLDELEVPVIPTCEPTGGPIGRLIRSFLRKEAVT--TPLA 67

Query: 67  EAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A ++AA R DH+ N      +  K  +++ DR+  SS AYQ  +       +  +    
Sbjct: 68  IAGLYAADRDDHLHNPQTGLALHHKDSLIISDRYFYSSLAYQSVQ--VPFETVSMMNRY- 124

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQIFLDIARN 183
                P   I +D PV+I L R++ R + +E     +Y E +    +E+    F ++   
Sbjct: 125 ---PHPRYLIYIDTPVEICLARMKKRGAAQELFEYKEYLE-EVTSFYER---AFSELPEE 177

Query: 184 QPDRCHIVDSAHSFQSVATNILN 206
              +   VD +   + +  +I  
Sbjct: 178 --VKFLRVDGSMEIEDIFLHIKE 198


>gi|131840166|ref|YP_001096175.1| ORF140 [Cyprinid herpesvirus 3]
 gi|71068047|gb|AAZ23013.1| thymidylate kinase [Cyprinid herpesvirus 3]
 gi|84181500|gb|ABC55103.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706741|gb|ABG42967.1| ORF140 [Cyprinid herpesvirus 3]
 gi|129560659|dbj|BAF48954.1| deoxythymidylate kinase [Cyprinid herpesvirus 3]
          Length = 233

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 17/207 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ +GK+T   +L + L     +  + R P   TP  +     LL+    
Sbjct: 19  RRGALIILEGVDRSGKSTQCRMLVKALLEMGVEAELMRFPDRTTPIGQMINSYLLNKS-- 76

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +       ++F+A R +   ++ +  LM+G  ++ DR+  S  A+   +       L+  
Sbjct: 77  DLDDHVVHLLFSANRWEAASDL-KRKLMKGTTIVLDRYAFSGVAFTAAK---PGFELEWC 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   V    PD  + L +          +    R     + +E          R+ F  +
Sbjct: 133 KRTDVGLPKPDLVVFLAIEA--------SAVESRGGFGDERYE--VSAFQAAVRENFEVL 182

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
            ++       VD+A + + V  +IL +
Sbjct: 183 MKDVTVNWRKVDAARTPEQVHGDILRL 209


>gi|154496578|ref|ZP_02035274.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC
           29799]
 gi|150274211|gb|EDN01302.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC
           29799]
          Length = 224

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 15/219 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58
           SG  I FEG +G+GK+T  + L   L+++  D      P     + A   + L+      
Sbjct: 2   SGKLIVFEGTDGSGKSTQFAKLCERLEQEGTDFRRLIFPQYKEPSSALLRMYLNGEFGTH 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--F 116
            D+    A +  +A  R    +         G ++L DR+  S+  +Q  +        F
Sbjct: 62  PDDVNPYAASTFYAVDRYAAWKKDWGSYYQNGGLVLSDRYTTSNAVHQTCKLPEAEWENF 121

Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +  L +    ++    PD  I LD+P D  ++ ++ R     +   D  E  D     K 
Sbjct: 122 IRWLFDFECGKLGLPAPDLVIYLDMPTDKAVEMLRAREKATHTKG-DIHE-VDTEYLAKC 179

Query: 174 RQIFLDIARNQP-DRCHIVDSA---HSFQSVATNILNIV 208
           R+  L  A      R   VD      S + +   I +I+
Sbjct: 180 RRTALAAAGLLGWRRVSCVDGTGAVRSIEDIHREIWDII 218


>gi|197294394|ref|YP_001798935.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853721|emb|CAM11639.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 209

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 7/178 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKTT I  +K  LQ +N +V   +  G +      R + L+   +    
Sbjct: 2   KIIIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLT--HENLDN 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   ++  +  +   E  I P +   KI+L DR+L S++AY+     ++  +      + 
Sbjct: 60  QTRLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY-QIFYNLF 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            + + PD T+ L    +IG+ R + + + +    LD  E   +   +K  Q + +  +
Sbjct: 119 NRFIKPDMTVYLKTNPEIGINRKRTQSNHK----LDVIESSPISYFKKVEQGYDEFLK 172


>gi|317181157|dbj|BAJ58943.1| thymidylate kinase [Helicobacter pylori F32]
          Length = 191

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E  RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGENLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P   I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPKKIILLLIDKEGLKQRLSLKN-------LDKIENQGTEKLLTIQQKIKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I   + 
Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188


>gi|269118666|ref|YP_003306843.1| thymidylate kinase [Sebaldella termitidis ATCC 33386]
 gi|268612544|gb|ACZ06912.1| thymidylate kinase [Sebaldella termitidis ATCC 33386]
          Length = 227

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 17/222 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG +G+GK T  +LL + L+ +N+++     P     A     + LS      V
Sbjct: 2   GKLIIIEGSDGSGKETQTNLLYKKLKERNFNIKKISFPNYESPASEPLKMYLSGEFGKDV 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
           ++  + A +  FA  R    +           I+L DR+  S+  +Q  +   +  + +F
Sbjct: 62  NDVNSFAASTFFAVDRYASYKQDWEKFYNNSGIVLSDRYTTSNMVHQASKIENEEDKQIF 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++    +    PD  I LD+  ++  K + +R +             +    +  
Sbjct: 122 LKWLIDLEWNKLGLPTPDIVIFLDVSPELSQKLMSDRKNKITGEEKKDIHETNSEYLKNS 181

Query: 174 RQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWE 210
               L++A+       IV    D    + + +  +I+  + E
Sbjct: 182 YYNALNLAKQYG--WTIVSCETDGVLKNIEEINEDIIKKLSE 221


>gi|296817147|ref|XP_002848910.1| thymidylate kinase [Arthroderma otae CBS 113480]
 gi|238839363|gb|EEQ29025.1| thymidylate kinase [Arthroderma otae CBS 113480]
          Length = 233

 Score =  135 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 14/212 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +  EG++ AGK+T  + L +FL  + + V   R P  T +        L  G  +
Sbjct: 9   RRGALVVVEGLDRAGKSTQCATLYQFLINQGHKVKYIRFPDRTTSIGQMIDKYL-RGEIQ 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ +   LD   
Sbjct: 68  LDDHAVHLLFSANRWEAAAQ-IRQDIEGGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +    PD    L++  +   KR             + +E   V + +K  ++F+ ++
Sbjct: 126 RPEIGLPRPDIWFFLNISTESAAKR--------GGYGTERYE--TVNLQKKVGKLFISLS 175

Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELV 212
             +  +   +VD+    + ++  + + V + +
Sbjct: 176 GLKGNEDMRVVDAGREIEEISRELQSEVLQTI 207


>gi|327301613|ref|XP_003235499.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
 gi|326462851|gb|EGD88304.1| thymidylate kinase [Trichophyton rubrum CBS 118892]
          Length = 235

 Score =  135 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 14/214 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +  EG++ AGK+T  + L +FL  + +     R P  T +     +  L  G  +
Sbjct: 11  RRGALVVVEGLDRAGKSTQCARLHQFLVDQGHKTKYIRFPDRTTSIGKMINQYL-RGEIQ 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  +VF+A R +     I+  +  G  ++ DR+  S   Y   +++ +   LD   
Sbjct: 70  LDDHAVHLVFSANRWEAAAQ-IQRDIESGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD    L++  ++   R             + +E   V + +K  ++FL + 
Sbjct: 128 RPEVGLPRPDIWFFLNVSTEVAAAR--------GGYGTERYE--TVNLQKKVGKLFLSLT 177

Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +  +   IVD+      ++  I   V + + K
Sbjct: 178 GLKGNEDMRIVDAGREVDEISHEIREEVLQTMAK 211


>gi|254585257|ref|XP_002498196.1| ZYRO0G04554p [Zygosaccharomyces rouxii]
 gi|238941090|emb|CAR29263.1| ZYRO0G04554p [Zygosaccharomyces rouxii]
          Length = 218

 Score =  135 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I  EG++  GK+T  S+L   L+    +  + + P  T       +  L+    
Sbjct: 1   MARGLLILVEGLDRTGKSTQASILLDKLK---PNAELVKFPDRTTPIGQLINRYLTDESF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   ++  ++F+A R + +   ++  L+ GK ++ DR++ S  AY   +     +  D  
Sbjct: 58  QLPDQSIHLLFSANRWE-LSQSLQNTLLSGKHVIMDRYVYSGIAYSLAK-GIDGMDFDWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +     + PD    L         R     + RE    + +E   +   EK R  F  +
Sbjct: 116 IQPDKGLIKPDLLFFL-------SNRDSLDTASREGFGQERYE--SLAFQEKVRDQFYRV 166

Query: 181 ARN--------QPDRCHIVD-SAHSFQSVATNILNIVWELVQ 213
                        +R  +++ +  S   V+  I  IV   +Q
Sbjct: 167 LERLENYSQGTDSNRLQMINVTNQSIDQVSITIWEIVNRKLQ 208


>gi|261840150|gb|ACX99915.1| thymidylate kinase [Helicobacter pylori 52]
          Length = 191

 Score =  135 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALEEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E + +     I +K +     +
Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S +++   I   + 
Sbjct: 160 REKFGCEVLELDAQKSAKNLHEKITAFIK 188


>gi|272761174|gb|ACZ95827.1| thymidylate kinase [Jujube witches'-broom phytoplasma]
          Length = 212

 Score =  135 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 16/211 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I  L+  L+       + +  G +   +  R + L+    +   
Sbjct: 2   KLIVFEGLDGSGKTSLIHALQPQLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLDSLQ 121
                +  A        +I P L   ++++ DR+L S+YAYQ     ++  Q L L  + 
Sbjct: 57  ITRFYLSLANMSQIQAELIVPQLKNNQLIILDRWLPSTYAYQLFPFSKEKKQLLPLKKIF 116

Query: 122 EISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +I+ + +   PD  I LD+   IG  R +N+ + +     D  ER+ +   +  RQ +  
Sbjct: 117 KINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQR----DLIERQSLTYFQNVRQGYDH 172

Query: 180 IARNQPDRC--HIVDSAHSFQSVATNILNIV 208
              +        I++ + S +S    I+  +
Sbjct: 173 YITHYTSGVNKLILNGSDSIKSNVKQIIKQI 203


>gi|219886119|gb|ACL53434.1| unknown [Zea mays]
          Length = 255

 Score =  135 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 20/219 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  +  EG++ +GKT+  + L  FL+ K Y+    R P    +        L+    + 
Sbjct: 52  RGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFPDRATSVGQMISSYLA-NDSQL 110

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +    ++   L+ G  L+ DR+  S  A+   +     L ++  + 
Sbjct: 111 DDRTIHLLFSANRWE-KRALMESKLLSGTTLIVDRYSYSGVAFSAAKG----LDIEWCKA 165

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                + PD  I LD+  +   +R             + +E+  +   +K  + +  +  
Sbjct: 166 PENGLIAPDLVIYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVAEHYHSLRD 215

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLS 220
           +      +VD     ++V   + ++    +Q  + +PL+
Sbjct: 216 S---TWKVVDGFLPMETVEEKLRDLATSCIQDCQGNPLT 251


>gi|291900|gb|AAA21719.1| thymidylate kinase [Homo sapiens]
          Length = 212

 Score =  135 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 21/224 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ AGK+T    L   L    +   + R P   T   +     L      
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLKKKSDV 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  
Sbjct: 64  E--DHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD  + L L +    KR         +   + +E  +    E+  + F  +
Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
            ++      +VD++ S ++V   +     + +    +K +  L 
Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEELRVLSEDAIRTATEKPLGELW 211


>gi|224437631|ref|ZP_03658584.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818]
 gi|313144083|ref|ZP_07806276.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818]
 gi|313129114|gb|EFR46731.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818]
          Length = 201

 Score =  135 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 95/210 (45%), Gaps = 19/210 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--- 61
           +++  EG++  GK+T + LLK+   +       T+EPGG+   E+ R ++L     +   
Sbjct: 1   MYVVIEGVDTCGKSTQLELLKKHFPQ----AVFTKEPGGSVIGESLRDLILFAPQRQGFV 56

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE ++F A R  H + V++P   + ++++ DR L SS AY    D  + +    L 
Sbjct: 57  LDEYAEFMLFLADRAQHYKEVLKPH--KNRLVISDRSLISSIAYAKHIDMDKAIM---LN 111

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ ++ ++P   +IL L       R++++ +       D  E + +    + +    +  
Sbjct: 112 KLVLRGILPQLVVILKLEKSALQARLESKKN-------DSIESRGIEYMLEIQGRMCEAT 164

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +        ++++   + +   I+  +  +
Sbjct: 165 KMLNLPYIEINASLDREVICQEIVGEIKRV 194


>gi|289644563|ref|ZP_06476634.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
 gi|289505631|gb|EFD26659.1| thymidylate kinase [Frankia symbiont of Datisca glomerata]
          Length = 210

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G F++ +G  G GK+T  + L   L  +   V  T+EP  +P     R      G D
Sbjct: 1   MNRGFFVAIDGPSGIGKSTVTAALAGQLAGQGLPVLATKEPTASPLGSLTRF-----GTD 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           ++   A A + AA R  H+E  IRPAL  G +++CDR++ SS   Q        +    L
Sbjct: 56  DYQGLALACLVAADRYQHLETEIRPALASGTVVVCDRYVASSLVLQR----LDGVPPKFL 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
             ++ Q   PD T+IL        +R   R 
Sbjct: 112 WALAEQADRPDLTVILTGDPIRSRERAARRG 142


>gi|329766083|ref|ZP_08257642.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137354|gb|EGG41631.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 193

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 84/209 (40%), Gaps = 19/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFG 63
           + I  EG + AGK T  +LL + L+++         P   TP  +     L   G  +F 
Sbjct: 1   MIIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPIGKEISKYL--NGKRKFP 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +    + AA R + + ++I  A  +  +++ +R+  S+  Y      ++      L+ +
Sbjct: 59  PQVIHCLLAANRWEKLNDIIN-AQSKNSVIIMNRYYQSNLIYGLANGMNR----KWLENL 113

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                  D  I+LD+      +R +           D FE+ +        +I+  IA+ 
Sbjct: 114 DSGLPKADLVILLDVSQTESFRRKKTNR--------DKFEK-NEEFLRNISKIYRKIAKQ 164

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +   I+D++   Q V  +IL    + +
Sbjct: 165 --ENWKIIDASRPKQEVHKDILQAFTKKI 191


>gi|272761198|gb|ACZ95828.1| thymidylate kinase [Jujube witches'-broom phytoplasma]
          Length = 212

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 16/211 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I  L+  L+       + +  G +   +  R + L+    E+  
Sbjct: 2   KLIVFEGLDGSGKTSLIHALQPQLKT---PHQLYQGLGSSSLGKEIRDLFLNFQQVEY-- 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLDSLQ 121
                +  A        +I P L   ++++ DR+L S+YAYQ     ++  Q L L  + 
Sbjct: 57  ITRFYLSLANMSQIQAELIIPQLKNNQLIILDRWLPSTYAYQLFPFSKEKQQLLSLKQIF 116

Query: 122 EISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +I+ + +   PD  I LD+   IG  R +N+ + +     D  ER+ +   +  RQ +  
Sbjct: 117 KINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQR----DLIERQSLTYFQNVRQGYDH 172

Query: 180 IARNQPDRC--HIVDSAHSFQSVATNILNIV 208
              +        I++ + S +S    I+  +
Sbjct: 173 YITHYTSGVNKLILNGSDSIKSNVKQIIKQI 203


>gi|251771464|gb|EES52041.1| thymidylate kinase [Leptospirillum ferrodiazotrophum]
          Length = 226

 Score =  135 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62
           GL I+ EG +G+GKTT   LLK +   +   V V          E  R  +      +  
Sbjct: 9   GLLIAIEGTDGSGKTTQAELLKHYYLSRGVAVVV----SACNTVELIRKAISDLKQQNYL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                + ++AA  +D  E+ I PAL  G++++ ++++ + ++    R  +     D +  
Sbjct: 65  DPVTFSFLYAADFVDRFEHQIIPALESGQLVIAEQYVYTVFSRAILRGIAP----DWISN 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------RKDVMI---H 170
           I    ++P  T  LDLPV+  L+R+   +  R+    DY+E         RK        
Sbjct: 121 IFDFALVPAKTFYLDLPVETLLERLH--WKTRQERFFDYYESGMDMNLSGRKKDSFVIYQ 178

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +  +++ ++A+        +D+        + + + +  L+
Sbjct: 179 RRLIEMYRELAKTHH--MDTIDATAPIHRQQSTLRSRIDALL 218


>gi|85091013|ref|XP_958694.1| thymidylate kinase [Neurospora crassa OR74A]
 gi|12718338|emb|CAC28573.1| related to thymidylate kinase [Neurospora crassa]
 gi|28920075|gb|EAA29458.1| thymidylate kinase [Neurospora crassa OR74A]
          Length = 309

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 15/176 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GKTT + LL+    +    V   R P   TP  +     L S    +
Sbjct: 23  RGALIVIEGLDRSGKTTQVKLLEDRFLKAGKKVKTMRFPDRTTPIGQMIDSYLKSQA--Q 80

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V+  I   L +G  L+ DR+  S   Y   + +   L L   +
Sbjct: 81  MDDHVIHLLFSANRWEAVKK-ITSELSQGTTLILDRYYHSGIVYSAAKQN-PSLSLSWAR 138

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              +    PD  + LDL  +           LR     + +E+    +  + R++F
Sbjct: 139 APEIGLPRPDLVLFLDLDEEQA--------RLRGGWGHELYEK--AEMQRRVRELF 184



 Score = 35.0 bits (80), Expect = 6.9,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 17/31 (54%)

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R + +  H++D++ S + VA  +  +V   V
Sbjct: 263 RQEEEDLHVIDASASVEEVAEELWKVVSARV 293


>gi|307638129|gb|ADN80579.1| Thymidylate kinase [Helicobacter pylori 908]
 gi|325996729|gb|ADZ52134.1| Thymidylate kinase [Helicobacter pylori 2018]
 gi|325998323|gb|ADZ50531.1| Thymidylate kinase [Helicobacter pylori 2017]
          Length = 191

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R++ L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKTRFK----NALFTKEPGGTRMGESLRYIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSEFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q ++P   ++L +  + GLK    R SL+    LD  E +        +Q     A   
Sbjct: 107 TQSILPTKIVLLVID-EEGLK---QRLSLK---SLDKIENQGAEKLLTIQQKLKTHAYAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +++  S +++   I   + 
Sbjct: 160 KEKFGCEVLELNAKESVKNLHEQITAFIK 188


>gi|116200466|ref|XP_001226045.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
 gi|88175492|gb|EAQ82960.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51]
          Length = 317

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 86/244 (35%), Gaps = 36/244 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  +  EG++ +GKTT + LL++        V V R P   TP  +     L S    E
Sbjct: 64  RGALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLKSQ--VE 121

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +     I   L +   +LCDR+  S   Y   + +   L L   +
Sbjct: 122 MDDHVIHLLFSANRWE-AAKTITHLLTQSTTVLCDRYYHSGIVYSSAKQN-PSLTLPWAR 179

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR------VQNRYSLRESACLDYF------------- 162
              +    PD  + LDL  +    R         R  ++       +             
Sbjct: 180 GPEIGLPRPDLVLFLDLDENQARARGGWGGEAYERAEMQRRGGSRRWWWGGLVNGGGGSG 239

Query: 163 --------ERKDVMIHEKRRQ----IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                    R+++ +                R + +  H+VD++ S + VA  I  +V  
Sbjct: 240 GGSGGNGGPREEIAVGAPTAAQPLTGVEYRFRQEEEDLHVVDASSSAEEVAEEIWKVVKA 299

Query: 211 LVQK 214
            V++
Sbjct: 300 RVEE 303


>gi|317013243|gb|ADU83851.1| thymidylate kinase [Helicobacter pylori Lithuania75]
          Length = 191

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKNRFK----NALFTKEPGGTKMGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +++  S +++   I   + 
Sbjct: 160 QEQFGCEVLELNAKESVKNLHEKITAFIK 188


>gi|332022461|gb|EGI62769.1| Thymidylate kinase [Acromyrmex echinatior]
          Length = 208

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 18/213 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG + AGK+T + +L   L            P          +  LS  ++ 
Sbjct: 3   KRGALIVLEGCDRAGKSTQVKMLMNALNDLRIPAKARAFPNRKTPVGTILNSFLSKEIN- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              EA  ++F+A R +  +  +   L  G  L+ DR+  S   Y           L   Q
Sbjct: 62  MPPEAAHLLFSANRWE-CKEDMEKTLRSGTTLVIDRYAASGTVYTAANTG---RSLSWCQ 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +    PDC + L +         + +  LR     + FE       ++    +  + 
Sbjct: 118 QADLGLPKPDCVVFLKVS--------KQQQELRGDWGKERFEH--DEFQQRVNANYEKLR 167

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               D   I+++     +V   IL     ++Q 
Sbjct: 168 D---DTWVIINADQDESAVHAEILQKTLSVIQD 197


>gi|296488737|gb|DAA30850.1| thymidylate kinase [Bos taurus]
          Length = 212

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L  + +   + R P  +          L    + 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R +HV  +++  L +G  L+ DR+  S  A+   +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEHVP-LMKEKLSQGVTLVVDRYAFSGVAFTSAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +     R             + +E       ++  Q F  + 
Sbjct: 119 QPDVGLPKPDLVVFLQLQLAEAAAR--------GEFGRERYESGP--FQQRALQRFQQLL 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +      +V+++ S + V   I  +  + ++
Sbjct: 169 ADPSLPWKMVNASRSIEDVHREIRALSEDAIR 200


>gi|320012975|gb|ADW07824.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331]
          Length = 217

 Score =  134 bits (339), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 87/230 (37%), Gaps = 25/230 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+FI+ +G  G GK+T I  L + L  +   VH T EP  +      R          
Sbjct: 4   KRGMFITIDGPSGVGKSTTIRALHQELTARGIPVHRTAEPTTSDLGRFIRA-----HFSH 58

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A A + AA R +HV   IRP L  G  ++ DR+L S+   Q        + L  L 
Sbjct: 59  IRGHALACLVAADRYEHVAQEIRPRLSAGDTVISDRYLASTLVMQQ----LDGVPLKFLL 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++   +MPD  +IL     +   R+  R         + F           R++ L  A
Sbjct: 115 DLNANVLMPDLAVILTAAPALIADRISAR------GPRNRFHLDPTAPG---REVLLYKA 165

Query: 182 RNQ-----PDRCHIVD-SAHSFQSVATNILNIVW-ELVQKRVSPLSSKKD 224
             Q       +  +V+    +   VA  I + +    +    SP S+   
Sbjct: 166 AAQTLMTTHVKVLVVNTGGATPSEVAATITDAIPCSSIASAASPQSTPPQ 215


>gi|15646083|ref|NP_208265.1| thymidylate kinase [Helicobacter pylori 26695]
 gi|6016459|sp|O26009|KTHY_HELPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|2314650|gb|AAD08513.1| thymidylate kinase (tmk) [Helicobacter pylori 26695]
          Length = 191

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVELLKDRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180
            Q V+P   I+L +  +   +R+  +        LD  E + +     I +K +     +
Sbjct: 107 TQSVLPAKIILLLIDKEGLKQRLSLK-------SLDKIENQGIEKLLHIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S +++   I   + 
Sbjct: 160 QEKFGCEVLELDAKESVKNLHEKIAAFIK 188


>gi|260943900|ref|XP_002616248.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
 gi|238849897|gb|EEQ39361.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720]
          Length = 208

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 22/211 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GK+T    L   L  + Y          TP  +     L++   D  
Sbjct: 2   RGRLILIEGLDRSGKSTQAENLASALDAQLYK----FPDRSTPVGKLINEYLVNSSFD-L 56

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             EA  ++F+A R + V + +   L+ G+ ++ DR++ S  AY   + S      + L  
Sbjct: 57  SDEAAHLLFSANRWE-VAHEMEATLLRGQNIVLDRYIYSGIAYSLAKSSLNDY--EWLYS 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD T+ L + ++  L R       R+    + +E+       K +Q F+ I  
Sbjct: 114 PDKGLPKPDLTLFLTIDLEE-LSR-------RKGWGDERYEK--SAFQAKVKQCFMQILD 163

Query: 183 NQPDR---CHIVDSAHSFQSVATNILNIVWE 210
            + D       VD   S + V   ++ I+ E
Sbjct: 164 PEKDSSVEIVNVD-NLSIEQVKAKLMEIIKE 193


>gi|134045602|ref|YP_001097088.1| thymidylate kinase [Methanococcus maripaludis C5]
 gi|166221754|sp|A4FXE4|KTHY_METM5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|132663227|gb|ABO34873.1| dTMP kinase [Methanococcus maripaludis C5]
          Length = 199

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 52/229 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI FEGI+G GKTT   L+   L  K      T EP      ++ R +L      
Sbjct: 1   MNK--FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREIL---SGS 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E  A++FAA R++HV N I   L +   ++ DR++ SS  YQ         F+ ++
Sbjct: 51  QCQKETLALLFAADRVEHVFN-IEEDLKK-SHVVSDRYVYSSIIYQ-ISQGISKDFIYTI 107

Query: 121 QEISVQEVMPDCTIILDLPV----------DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            + +                          +  LKR+++R         + FE+  + I 
Sbjct: 108 NDYAK-------------TPDLVVLLDVDLNEALKRMESREK-------EIFEK--IEIQ 145

Query: 171 EKRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212
           +K ++ + ++  ++  +        IV+ ++ S   V   ILN + + +
Sbjct: 146 KKIKEGYYNLINSEDKKFMPKYGFIIVNTTSKSIHQVFDEILNAIIDKI 194


>gi|298246530|ref|ZP_06970336.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297554011|gb|EFH87876.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 262

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 17/218 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG +G G+TT + LL+ +L+   Y V  T       A +  +           G
Sbjct: 54  GRLIVIEGTDGVGRTTQLRLLRPWLESLGYAVADTEFTRSVLAGDGIKQA---KAGHTLG 110

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                + +A   +D +E+++ PAL  G I+L DR++ +  A    R ++ H     L+ I
Sbjct: 111 PITMHLFYATDFVDRLESLVLPALRAGFIVLIDRYIYTLMARAMVRGANPH----WLRSI 166

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY-------SLRESACLDYFERKDVMIHEKRRQI 176
               + P+    L++ +D  + RV  R         +      D +E   +    +    
Sbjct: 167 YSLALKPNAIFYLNIGIDDLIPRVLQRGGFNYWESGMDMRLGPDLYESF-ITYQARLLTQ 225

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           F  + +  P    ++D+    +++   + + ++ L+ +
Sbjct: 226 FEHMVK--PYEFQVIDAKQPVEAICAQLKSAIYPLLPQ 261


>gi|330916235|ref|XP_003297345.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
 gi|311330039|gb|EFQ94563.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1]
          Length = 155

 Score =  134 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 3/146 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG++ AGK+T    L   LQ     V   R P  T       +  LS   +
Sbjct: 1   MTRGKLIVFEGLDRAGKSTQCQKLVEDLQNDGMKVRHMRFPDRTTPIGQMINSYLSGDSE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +       ++F+A R +   N I+  L  G  ++ DR+  S   Y   +       L+  
Sbjct: 61  Q-EDHVIHLLFSANRWE-AANSIQADLTAGTTIIIDRYYYSGCVYSAAKQKHDMS-LEWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146
           +   +    PD  I LD+  +   KR
Sbjct: 118 RNPELGLPRPDLCIFLDISAEDAAKR 143


>gi|224418120|ref|ZP_03656126.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|253827447|ref|ZP_04870332.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313141655|ref|ZP_07803848.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
 gi|253510853|gb|EES89512.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313130686|gb|EFR48303.1| integral membrane protein [Helicobacter canadensis MIT 98-5491]
          Length = 194

 Score =  134 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 17/204 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EGI+ +GK+T I  LK F ++       T EPG T      R +LL   + +  +
Sbjct: 1   MYVAIEGIDTSGKSTQIQALKLFFKK----AIFTFEPGATNLGVRLREILLQDSI-QLDS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE ++F A R  H   +++       +++ DR L S  AY  +        L +    +
Sbjct: 56  RAEMLLFLADRAQHANEILQSH--ANNLIIADRSLISGMAYAKDF---DFDTLKTFNLFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q ++P+  IIL+L  D   KR+ ++ +       D  E++ +      ++    I +  
Sbjct: 111 TQGILPNKVIILELQKDDLQKRLNSKGN-------DKIEQRGLEYLLSLQERIKSITQKL 163

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                I+++     S+   I++ +
Sbjct: 164 SLEHRIINANLPKDSITKQIVDFI 187


>gi|323446155|gb|EGB02432.1| hypothetical protein AURANDRAFT_35261 [Aureococcus anophagefferens]
 gi|323448063|gb|EGB03967.1| hypothetical protein AURANDRAFT_33306 [Aureococcus anophagefferens]
          Length = 214

 Score =  134 bits (338), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 17/199 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+F+ FEG++ +GK+T   LL   L+ K     + R P  +          L   ++ 
Sbjct: 8   KRGVFVVFEGVDRSGKSTQCKLLVEGLRAKGRSAELRRFPERSTGIGQLIDKYLKRELE- 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R D     I  AL  G  ++CDR+  S  A+   + +     LD  +
Sbjct: 67  LDDRAVHLLFSANRWDEAAK-IERALASGVDVVCDRYAFSGVAFSAAKPNID--DLDWCK 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  + L++P      R             + +E  +  + ++  Q F+D+ 
Sbjct: 124 APDAGLPKPDVVVFLEIPAAKAEAR--------GGFGDERYE--ESAMQKRVAQHFVDL- 172

Query: 182 RNQPDRCHIVDSAHSFQSV 200
              P    ++D+A +   V
Sbjct: 173 -RGPS-WRVLDAARTVDEV 189


>gi|15612432|ref|NP_224085.1| thymidylate kinase [Helicobacter pylori J99]
 gi|8134530|sp|Q9ZJE5|KTHY_HELPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|4155994|gb|AAD06956.1| THYMIDYLATE KINASE [Helicobacter pylori J99]
          Length = 191

 Score =  134 bits (338), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H+E+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E + +     I +K +     +
Sbjct: 107 TQSVLPEKIILLLINKENLKQRLSLK-------SLDKIENQGIEKLLTIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S +++   I   + 
Sbjct: 160 QEKFGCEVLELDAQKSAKNLHEKIATFIE 188


>gi|305432214|ref|ZP_07401378.1| thymidylate kinase [Campylobacter coli JV20]
 gi|304444757|gb|EFM37406.1| thymidylate kinase [Campylobacter coli JV20]
          Length = 192

 Score =  134 bits (338), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 15/206 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEG++  GK+T ISLLK   +    +   T EPGGT      R +LL     +   
Sbjct: 1   MYVVFEGVDCVGKSTQISLLKECFK----EAVFTAEPGGTKLGNHLRELLLYKPY-QLDK 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E ++F A R  H E +++    + K+++ DR   S  AY  +    ++  L  L   +
Sbjct: 56  KTELLLFLADRAQHCEEILKA--NQDKLIISDRSFISGMAYAKDF---ENEELFRLNAFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++   P   I L    ++  +R+ Q      E   +DYF    + + +K       +   
Sbjct: 111 LENFFPQKVIFLKGDENLIKERLSQKEQDAIEKRGIDYF----LSVQDKLENTLYFLKEK 166

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
              +   +++  + +++   I + + 
Sbjct: 167 INLQVLTLNANDTKENLHQKIKDFLQ 192


>gi|320582782|gb|EFW96999.1| Thymidylate and uridylate kinase [Pichia angusta DL-1]
          Length = 210

 Score =  134 bits (338), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 17/215 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ I+ EG++  GKTT  S L   L +   D  + + P  T       +  L+    
Sbjct: 1   MTRGVLIAIEGLDRTGKTTQTSRLLERLDKSGVDATLIKFPERTTPIGRIINTYLTDKAF 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   ++  ++F+A R + +   IR  L +GK ++ DR++ S  AY   +     L  D  
Sbjct: 61  ELSDQSAHLLFSANRWE-LAEKIRNLLEDGKTVVLDRYVYSGVAYSSAKG----LPFDWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +    PD  +         +K        RE    + +E       ++ +  F   
Sbjct: 116 LSPDLGLPKPDIVLF--------MKFKHEDNVTREGFGEERYE--VAEFQQRVKTQFEKF 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                 +   VD   S + V   I    +E+V +R
Sbjct: 166 QNEDNWKTIYVD-NKSIEEVGELIWAE-YEVVARR 198


>gi|16975360|pdb|1E98|A Chain A, Wild Type Human Thymidylate Kinase Complexed With Aztmp
           And Adp
          Length = 215

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 7   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 66  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 171

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++   ++V   I     + +    +K +  L 
Sbjct: 172 KDTTLNWKMVDASKRIEAVHEEIRVLSEDAIRTATEKPLGELW 214


>gi|307353971|ref|YP_003895022.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
 gi|307157204|gb|ADN36584.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571]
          Length = 210

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 32/222 (14%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN+  GLFI+ +G  G GK+T +  L + L  + ++ + TREP  +   +  R       
Sbjct: 1   MNTSYGLFITLDGPNGVGKSTIMGDLCKKLTSQGFETYKTREPTDSLIGDFLRK-----S 55

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +++  +  A + A  R  H+E+ I PAL + KI+L DR+++SS   Q        + L+
Sbjct: 56  EEKYRGKTLACIAATDRYYHIEHEILPALQKKKIVLSDRYVESSLVLQR----IDDVDLE 111

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQ--------NRYSLRESACLDYFERKDVMIH 170
            + EI+   ++PD ++IL    D   KR+          R        LDY+ R+     
Sbjct: 112 FIWEINKNVIIPDLSVILLASPDTLNKRLNLRSDGSFFERKKTARKDELDYY-RQAAEFL 170

Query: 171 EKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWEL 211
           EK  Q F           +++D+ + S +  + +I   + +L
Sbjct: 171 EK--QGF---------NVYVLDNESTSIEENSESITKRIVDL 201


>gi|317011608|gb|ADU85355.1| thymidylate kinase [Helicobacter pylori SouthAfrica7]
          Length = 191

 Score =  133 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T I LLK   Q    +   T+EPGGT   E  R + L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQIELLKGAFQ----NALFTKEPGGTKTGETLRRIALN---ENMSE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q ++P+  I+L +  + GLK    R SL+    LD  E++     + I +K +     +
Sbjct: 107 TQSILPEKIILLLID-EEGLK---ERLSLK---SLDKIEKQGAEKLLQIQKKLKTHAYIL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +++  S +++   I+  + 
Sbjct: 160 KEQFGCEVLELNAKESVKNLHEKIMVFIE 188


>gi|325675694|ref|ZP_08155378.1| thymidylate kinase [Rhodococcus equi ATCC 33707]
 gi|325553665|gb|EGD23343.1| thymidylate kinase [Rhodococcus equi ATCC 33707]
          Length = 222

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G+ I+ EG++GAGK T +  +   L+    DV     P  G +  A+ A   L     D 
Sbjct: 2   GMLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R    + + R  +    +++ DR++ S+ AY   R  +     F+ 
Sbjct: 62  SASVHAMAVMFALDRAGAADRL-RDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVG 120

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ +    +    PD  + LD+PV +  +R + R +   S  LD +E+ D  +  +  +
Sbjct: 121 WIENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYEK-DSGLQARTGE 179

Query: 176 IFLDIARNQ 184
           ++ ++A   
Sbjct: 180 VYRELAAAD 188


>gi|313157974|gb|EFR57380.1| dTMP kinase [Alistipes sp. HGB5]
          Length = 229

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 27/230 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60
           +FI  EG++GAGK+T I +L++    +  +   VH  R          AR +     GV 
Sbjct: 1   MFIVLEGLDGAGKSTQIRMLRQLFTDRGVESEYVHFPRFDSPVYGQLIARFLRGEFGGVQ 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117
           E      A++FA  R D     IR  L EGK ++ DR++ S+  +Q  +      +    
Sbjct: 61  EVDPYLVALIFAGDRADAAPQ-IRQWLAEGKAVVLDRYVYSNVGFQCAKLPAGEERDRLA 119

Query: 118 DSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVM 168
           D +  +         PD ++ LD+P        +    +RE    DY +         + 
Sbjct: 120 DWIVNLEFGHNALPRPDLSLFLDVPFAFTE---RKLSEVREGDDRDYLQGGQDIHEASLQ 176

Query: 169 IHEKRRQIFLDIARNQPDRCHIVD------SAHSFQSVATNILNIVWELV 212
           + +  R ++L  A   P    +VD      +  S + +   I   +  ++
Sbjct: 177 LQQDVRSVYLASAAKDPS-LRVVDCSDASGAMESPEGIFAKIRAELIPIL 225


>gi|296425149|ref|XP_002842105.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638364|emb|CAZ86296.1| unnamed protein product [Tuber melanosporum]
          Length = 214

 Score =  133 bits (336), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 80/201 (39%), Gaps = 16/201 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I+ EG++ AGK+T   LL   L  +N    + + P  T       +  LS     
Sbjct: 8   TRGALIAIEGLDRAGKSTQCQLLMDRLAERNVPARLQKFPDRTTPIGKMINAYLSTSTT- 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +   ++++  L +G  ++ DR++ S   +   +     L LD  +
Sbjct: 67  LEDHTIHLLFSANRWELSAHILK-LLNDGVTIVLDRYVYSGIVFSAAKG----LSLDYCR 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V     D  + LDL  ++           R     + +E +   +  + R +F ++ 
Sbjct: 122 APDVGLPRADVVLFLDLDAEVA--------RRRGGFGGERYEVE--AVQRRVRDLFKEVG 171

Query: 182 RNQPDRCHIVDSAHSFQSVAT 202
             +  R  +VD+  S + V  
Sbjct: 172 EKEEGRWRVVDAGRSVEEVRE 192


>gi|295100620|emb|CBK98165.1| thymidylate kinase [Faecalibacterium prausnitzii L2-6]
          Length = 223

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 34/234 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M+ G  +  EG++G+GK T   LL   L      V     P     + A   + LS    
Sbjct: 1   MSKGRLLVIEGLDGSGKATQAKLLAAHLAEGGRRVMEITFPDYESDSSALVKMYLSGRFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D+    A +  +A  R    +         G I++ DR+  S+  +Q  +       
Sbjct: 61  DKPDDVNPYAASSFYAVDRYASYKTRWGSFYEAGGIVIADRYTTSNAVHQCSK--LPPEQ 118

Query: 117 LDSLQEIS-------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            D     +       +    PD  + L +   +  K +  RY   ES            +
Sbjct: 119 WDDFLRWAFDYEYRLLGLPAPDAVVYLQVDPAVSQKLMTGRYHGDESRK---------DV 169

Query: 170 HEKRRQIFLDIARNQPDRCHI------VD-----SAHSFQSVATNILNIVWELV 212
           HEK  + +L  +R   + C +      V      +  + + +   +  +  + +
Sbjct: 170 HEKDIE-YLARSRRAAEYCAVHLGWATVHCTENRAMRTIEEIQAEVRALAEKEL 222


>gi|289614663|emb|CBI58566.1| unnamed protein product [Sordaria macrospora]
          Length = 279

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 86/243 (35%), Gaps = 36/243 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GKTT + LL+   +++   V   R P   TP  +     L S    +
Sbjct: 26  RGALIVVEGLDRSGKTTQVKLLEERFRKEGKRVKTMRFPDRTTPIGQMIDSYLKSQA--Q 83

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V+  I   L  G  L+ DR+  S   Y   + +   L L   +
Sbjct: 84  MEDHVIHLLFSANRWEAVKT-ITTELSLGTTLILDRYYYSGIVYSAAKQN-PSLSLSWAR 141

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL--- 178
              +    PD  + LDL  +    R     +L  +                +R+  L   
Sbjct: 142 APEIGLPRPDLVLFLDLDEEQARLRGGGTAALGGAGTGGGGSGGKGDGEVSKREAVLLSD 201

Query: 179 -----------------------DIARNQPDR-----CHIVDSAHSFQSVATNILNIVWE 210
                                   IAR    R      H+VD++ S + VA  +  +V  
Sbjct: 202 EPAAQEEVAVGAPTPLAGSAGGQHIAREYAFRQEEEDLHVVDASASVEEVAEEVWRVVSA 261

Query: 211 LVQ 213
            V+
Sbjct: 262 RVE 264


>gi|210135641|ref|YP_002302080.1| thymidylate kinase [Helicobacter pylori P12]
 gi|238057699|sp|B6JNX2|KTHY_HELP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|210133609|gb|ACJ08600.1| thymidylate kinase [Helicobacter pylori P12]
          Length = 191

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVVLEGVDGAGKSTQVGLLKNKFK----NALFTKEPGGTKIGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E K+++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSEFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--LDIAR 182
            Q ++P   ++L +  +   +R+  +        LD  E + +      ++       A 
Sbjct: 107 TQSILPTKIVLLLIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQRNLKTHAYAL 159

Query: 183 NQPDRCHI--VDSAHSFQSVATNILNIVW 209
            +   C +  +++  S +++   I   + 
Sbjct: 160 REKFGCKVLELNAKESVKNLHEKIAAFIK 188


>gi|306821414|ref|ZP_07455019.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550536|gb|EFM38522.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 217

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 82/219 (37%), Gaps = 21/219 (9%)

Query: 4   GLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
           G F   E G +  GK T  +LL   L++ N  V     P    A  +   + L+      
Sbjct: 2   GKFYVIESGSDACGKATQSNLLYTHLKKDN-KVLKVEFPNYKSATSSLVKMYLNGDFGKN 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHL 115
            ++      +  FAA R    +  I     +  I++ DR+  S+  YQ  +      ++ 
Sbjct: 61  PEDVNPYITSTFFAADRYATFKTEIEKYYNDDYIIIADRYTTSNMVYQAGKYDDIDEKNK 120

Query: 116 FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FLD L +          PD    LDLP +I  K ++NR S+++   +D  E       EK
Sbjct: 121 FLDWLYDFEFNLYELPKPDKVFFLDLPFEISYKLMKNR-SVKKGVDVDIHEN-SRDYLEK 178

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILN 206
             +    +A         +D        S   +   ILN
Sbjct: 179 VYENAKFVAEKYG--WCHIDCQENGCLKSVDDIHQLILN 215


>gi|62898429|dbj|BAD97154.1| deoxythymidylate kinase (thymidylate kinase) variant [Homo sapiens]
          Length = 212

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 88/223 (39%), Gaps = 19/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG+  AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVGRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211


>gi|190345821|gb|EDK37769.2| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 215

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 21/214 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GKTT   +L   +   +    + + P  +       +  L+      
Sbjct: 2   RGHLILIEGLDRSGKTTQTQILHNAIPSSS----LIKFPDRSTNIGTIINQYLTDHNFSL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFLD 118
             +A  ++F+A R +   + I   L  G  ++ DR++ S  AY   +     S +   ++
Sbjct: 58  SDQAAHLLFSANRWELAAS-IEDQLQAGHTVIMDRYIYSGIAYSLAKSETSSSPEMASVE 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L         PD TI L L +     R        +S   + +E+      E  ++ FL
Sbjct: 117 WLYAPDRGLPKPDVTIFLTLDIAEMAAR--------KSWGEERYEQTK--FQEVVKRCFL 166

Query: 179 DIARNQPD-RCHIVDSAH-SFQSVATNILNIVWE 210
            +     D    IVD        VA+ I  +V E
Sbjct: 167 KVLDPHADPSVVIVDVNKLGIDEVASKIWTVVEE 200


>gi|320530090|ref|ZP_08031160.1| dTMP kinase [Selenomonas artemidis F0399]
 gi|320137523|gb|EFW29435.1| dTMP kinase [Selenomonas artemidis F0399]
          Length = 229

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 77/227 (33%), Gaps = 19/227 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           M  G     E  +G+GK T   LL   L+R  + +     P     +     + L     
Sbjct: 1   MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113
              D+  A A +  FA  R              G ++L DR+  S+  +Q  +   D+ +
Sbjct: 61  THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FLD L ++    +   +PD    LD+      + +  R   +  A  D  ER D    
Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDMEPAAAQRLIAARTE-KNGAAPDIHER-DADYL 178

Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212
            +    ++ +A         +    D A      +   +   V   +
Sbjct: 179 ARTHDAYVLLAARYG--WVRIPSSTDGAPLPIAEIHERLYREVQTYL 223


>gi|187777353|ref|ZP_02993826.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC
           15579]
 gi|187774281|gb|EDU38083.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC
           15579]
          Length = 235

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 88/232 (37%), Gaps = 27/232 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M  G  I  EG +G+GK T    L   L ++N  V     P     + A   + LS    
Sbjct: 5   MKRGRLIVIEGSDGSGKATQTKKLYDKLVKQNKKVKKVEFPNYKSESSALIKMYLSGEFG 64

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D     A +  +A  R    +       ++G I++ DR+  S+  +Q  +      +
Sbjct: 65  KNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKEVQAK 124

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FL+ L +   ++    +PDC I LD+P       ++ R +          E++   IH
Sbjct: 125 DKFLNWLWDFEFEKFNLPVPDCVIFLDMPPKCSKSLMETRNNKFTG------EKEK-DIH 177

Query: 171 EKRRQIFLDIARN-----QPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
           E   +  L+   N     +    + ++        S   +  +I+ ++ + +
Sbjct: 178 ENNYEYLLESYNNSKYISEKYGWNRIECTNEDKIKSIDQINDDIIKVITKYI 229


>gi|194755687|ref|XP_001960115.1| GF13205 [Drosophila ananassae]
 gi|190621413|gb|EDV36937.1| GF13205 [Drosophila ananassae]
          Length = 211

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 16/214 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  I FEG + +GK+T    L   L+ +         P  +       +  L+   D
Sbjct: 4   IKRGALIVFEGCDRSGKSTQSRRLAELLKSRGIPTESLNFPDRSTDIGQVINSYLTNSKD 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E   ++F+  R + +  + R  L+ G  L+ DR+  S  AY   +     +  D  
Sbjct: 64  -LQDEVIHLLFSVNRWELMGKL-RQKLLAGTTLIVDRYSYSGVAYSVAKG----MDFDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + PD    L    D    R+  R    E    + +E+  V    +   ++  I
Sbjct: 118 YAPERGLIKPDAVFYLRAVPD----RLAERSEFGE----ERYEK--VEFQSRVSAVYDRI 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             N+    H +D++ +   +   I  I  +L+ K
Sbjct: 168 FSNESTYWHQLDASVTADELHFLIAEIAEKLLPK 201


>gi|86159732|ref|YP_466517.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776243|gb|ABC83080.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 561

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 9/211 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           + +SFEGI+G+GKT   +L+   L+R   +V   RE G   T AA   R +     + E 
Sbjct: 1   MLVSFEGIDGSGKTALSNLVCERLRRGGREVVHARERGVLATAAARRVRELTRDPRLLEL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  A     +E V+RPAL  G + + DR L S  A            +++   
Sbjct: 61  SPRAELCLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQIFL 178
            +     PD  +++D+  D  L R++ R         D            +  + R+   
Sbjct: 121 AASGGTWPDLAVLVDVDPD--LARLRKRVGKILEGRADEPGSRKGLAGHGLQVRVREHLA 178

Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIV 208
             A   P     V +   + +++A  + + +
Sbjct: 179 AEAAAAPASWLRVANEGRALEALADEVADAI 209


>gi|163867844|ref|YP_001609048.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
 gi|161017495|emb|CAK01053.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476]
          Length = 219

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 14/210 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F+   G +G+GKTT +  + R+  ++ + +  T +P             L  G    
Sbjct: 18  AGSFVVLCGFDGSGKTTQVQEISRYWAQEKH-IIQTFQPSHWYRNNQEVRDYLESG-KSI 75

Query: 63  GAEAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                A++ A  R  H   +I P+L      ++ DR++ SS AY   R     L L+S+ 
Sbjct: 76  DPLLLALLAATDRRKHTLEIIEPSLTSSQNFIISDRYVYSSLAYFYARG----LSLESVI 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++     P  T  L LP    ++R+Q R  L        +E + +   EK  +++  ++
Sbjct: 132 KLNQFIPRPCITFYLHLPPTAIIERLQKRDGLAL-----KYE-EKLSFIEKVYEVYQLLS 185

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               +R  ++D   S  S+   +   + + 
Sbjct: 186 EID-ERFIVIDGTASISSIHNQVRYHIDKA 214


>gi|153956386|ref|YP_001397151.1| hypothetical protein CKL_3795 [Clostridium kluyveri DSM 555]
 gi|219856699|ref|YP_002473821.1| hypothetical protein CKR_3356 [Clostridium kluyveri NBRC 12016]
 gi|146349244|gb|EDK35780.1| Tmk [Clostridium kluyveri DSM 555]
 gi|219570423|dbj|BAH08407.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 228

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
            G  I  EG +G+GK T    L   L  + Y+V     P     + A   + L+      
Sbjct: 5   KGKLIVIEGCDGSGKATQTRKLYNRLLDEKYNVKKVEYPNYNSESSALVKMYLNGDFGEN 64

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
            ++  A   +  +   R    +   +     G I+L DR+  S+  +Q  +      +  
Sbjct: 65  PEDVSAYVASTFYGVDRFASYKTQWKKFYEGGGIVLSDRYTTSNMVHQASKIDNIEEKDK 124

Query: 116 FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FL  L +          PDC I LD+P +     +  R +                IHE 
Sbjct: 125 FLKWLWDFEFNIFKLPVPDCVIFLDMPPEYSKNLMIERNNKFTGNA-------KKDIHES 177

Query: 173 RRQIFL-----------------DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             + +L                  I+  + DR + V+       +  NI ++V  ++
Sbjct: 178 NYE-YLINSYNNAVYVADKYGWNKISCIENDRINTVN------EIHKNIYSLVKYIL 227


>gi|328773773|gb|EGF83810.1| hypothetical protein BATDEDRAFT_8037 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 181

 Score =  132 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 16/182 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I  EG +  GKT+  S+L   L    ++V   + P  T          L  G  E
Sbjct: 11  SRGALIVVEGGDRCGKTSQCSVLVSHLCAAGFNVMAHKFPDRTLDTGVLIDQYL-RGTKE 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R + + + I+  + +G  ++ DR+  S  AY   +     + L+  +
Sbjct: 70  VDDHAIHLLFSANRWESMGH-IKSLIDQGITIVVDRYAFSGAAYTAAKG----IDLEWCK 124

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +  + PD  + LDL   I   R +           + +E   +      R+ F  IA
Sbjct: 125 RPDMGLLKPDLVLYLDLDPKIAAARAE--------YGSERYE--TIEFQAAVRRNFYQIA 174

Query: 182 RN 183
            +
Sbjct: 175 DD 176


>gi|298246531|ref|ZP_06970337.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297554012|gb|EFH87877.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 260

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 22/231 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI  EGI+G+GK+T I+LL+++L  + Y V    E   +P  +                
Sbjct: 13  LFIV-EGIDGSGKSTQIALLRQWLISQGYSVFF-SEWNSSPLVKQTTS--RGKKKQILTP 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              +++ A    D  E+ I P L  G I+L DR++ +++A           ++  L   +
Sbjct: 69  TTFSLIHATDFADRTEHDIIPPLKAGAIVLADRYIYTAFARDAA-RGVNRTWVRELYRFA 127

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESAC-------LDYFERKDVMIHEKRRQI 176
           VQ   P       +P+ + L+R+ N R  L+            D +E   +    +  Q 
Sbjct: 128 VQ---PTLAFYYRVPLSLSLRRIMNGRPQLKYYEAGMDLGLSTDPYESFKL-FQHRVVQE 183

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVS-PLSSKKD 224
           +  I         ++D+  S Q    ++  +V   ++  +R+S PL   + 
Sbjct: 184 YEAIVEEFE--LTVMDATLSIQEQQRHMRELVLPHLEGVRRISMPLPPLES 232


>gi|223938821|ref|ZP_03630709.1| thymidylate kinase [bacterium Ellin514]
 gi|223892519|gb|EEF58992.1| thymidylate kinase [bacterium Ellin514]
          Length = 250

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 95/223 (42%), Gaps = 22/223 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I  EG +G+G++T I+ L  +L+      H T + G   +   +  +  +   +  
Sbjct: 40  AGKLIVVEGADGSGRSTQIARLVEWLEGCG---HATVQVGLKRSTLVSEELNQAQHGNIL 96

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                ++ +A    D +EN+I PAL  G ++L DR++ +  A           +L +L  
Sbjct: 97  SHTTLSLFYATDFADQLENMILPALKAGFMVLADRYIYTLMARDLV-RGMDEAWLKNLYS 155

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLD-- 179
           I+   ++PD    L++  +  ++R     +  ++  LDY+E   D+ +  +    FL   
Sbjct: 156 IA---LVPDAVFYLNVSPEQLVQR-----NFAKNHSLDYWESGMDLGLSREMFDSFLKYQ 207

Query: 180 -IARNQPDR------CHIVDSAHSFQSVATNILNIVWELVQKR 215
            +  N+  R       +IVD       +  ++   +   +  R
Sbjct: 208 GLMANEFRRLQSIYGFNIVDGNRLPDEINADLRRKIEANLAGR 250


>gi|317014888|gb|ADU82324.1| thymidylate kinase [Helicobacter pylori Gambia94/24]
          Length = 191

 Score =  132 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVALEGVDGAGKSTQVELLKTRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H E+VI+PAL E ++++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYSAFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            Q ++P   ++L +  +   +R+  +        LD  E + +      +Q     A   
Sbjct: 107 TQNILPTKIVLLLIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQQKLKTYAYAL 159

Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209
            ++       +D+  S +++   I   + 
Sbjct: 160 QEKFGCEVLELDAKESVKNLHEKITAFIK 188


>gi|315638103|ref|ZP_07893288.1| thymidylate kinase [Campylobacter upsaliensis JV21]
 gi|315481951|gb|EFU72570.1| thymidylate kinase [Campylobacter upsaliensis JV21]
          Length = 193

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 25/212 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+  GK+T I LLK   +    D   T EPG T   E  R +LL+       +
Sbjct: 1   MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEHLRELLLNRPY-PISS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R  H E ++R    E K+++ DR + S  AY     +     L SL + +
Sbjct: 56  KAELLLFLADRNQHYEEILRE--NEQKLIISDRSIISGMAY---AKNFDLDILFSLNDFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ------IFL 178
           +    P   I L    ++  +R+  +        LD  E++ +      ++       FL
Sbjct: 111 LNGFFPQKAIFLRGDENLLKERLMQKN-------LDDIEKRGIAYFMDVQEKMEKVLNFL 163

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                   +   +D+  S +++   I   + +
Sbjct: 164 KF--KIDLKILELDAKDSIENLHEKIKEFIND 193


>gi|302685608|ref|XP_003032484.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
 gi|300106178|gb|EFI97581.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8]
          Length = 282

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 91/275 (33%), Gaps = 75/275 (27%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG++ +GK+T  + LK  L      V + + P  T A        L   ++ 
Sbjct: 3   TRGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNIE- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---------------- 105
                  ++++A R + + + I   L EG  ++CDR+  S  A+                
Sbjct: 62  MDDHVVHLLYSANRWE-LASRISTLLSEGTTIICDRYAFSGIAFSASKVASTSAAPTSAS 120

Query: 106 --------------------QGERDSSQHLFLDSLQEISVQEVMP--------------D 131
                               Q    +       S   I+   ++P              D
Sbjct: 121 SISASTSSSSPAALPSTSTSQSSALAPTSSTPASATSIAQTPLLPYAWCRAPDIGLPAPD 180

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-ARNQ---PDR 187
            T+  D+  +    R             + +ER+DV    +  +++  + A  +   P  
Sbjct: 181 VTLFFDIAPEAARAR--------GGYGEERYEREDV--QRRVMEVYARLGAEMEAARPGS 230

Query: 188 CHI---------VDSAHSFQSVATNILNIVWELVQ 213
                       VD+A + + VA  +  +V  LV+
Sbjct: 231 WVRVDAARAWEEVDAARAIEEVADAVWAVVGPLVK 265


>gi|108563864|ref|YP_628180.1| thymidylate kinase [Helicobacter pylori HPAG1]
 gi|123373654|sp|Q1CRB6|KTHY_HELPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|107837637|gb|ABF85506.1| thymidylate kinase [Helicobacter pylori HPAG1]
          Length = 191

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG++G GK+T + LLK   +    +   T+EPGGT   E+ RH+ L+   +    
Sbjct: 1   MYVVLEGVDGVGKSTQVGLLKDRFK----NALFTKEPGGTKMGESLRHIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +H E+VI+PAL E ++++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYSEFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P   I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPAKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +D+  S   +   I   + 
Sbjct: 160 QEKFGCEVLELDAQKSVGDLHRQIAAFIE 188


>gi|149643009|ref|NP_001092363.1| thymidylate kinase [Bos taurus]
 gi|148743918|gb|AAI42259.1| DTYMK protein [Bos taurus]
          Length = 212

 Score =  132 bits (332), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L  + +   + R P  +          L    + 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R +HV  +++  L +G  L+ DR+  S  A+   +   ++  LD  +
Sbjct: 63  VEDHSVHLLFSANRWEHVP-LMKEKLSQGVTLVVDRYAFSGVAFTSAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +     R +       S              ++  Q F  + 
Sbjct: 119 QPDVGLPKPDLVVFLQLQLAEAAARGEFGRERYGSGP----------FQQRALQRFQQLL 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +      +V+++ S + V   I  +  + ++
Sbjct: 169 ADPSLPWKMVNASRSIEDVHREIRALSEDAIR 200


>gi|255712129|ref|XP_002552347.1| KLTH0C02728p [Lachancea thermotolerans]
 gi|238933726|emb|CAR21909.1| KLTH0C02728p [Lachancea thermotolerans]
          Length = 214

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 24/221 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GK+T    L   L     D  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKSTQAGKLTERL---GPDSQLIKFPDRSTKIGGLINQYLTDPSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +A  ++F+A R + V   I+  L+EG+ ++ DR++ S  AY   +     + L   
Sbjct: 58  LLPDQAIHLLFSANRWE-VAEEIKALLLEGRNVVLDRYVYSGVAYSAAK-GVPGMDLRWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  V  + PD T+ L                LR+    + +E  +    +K R+ F   
Sbjct: 116 LQSDVGLLKPDLTLFL----------TNQGSELRQGFGDERYE--NSAFQQKVREQFSTF 163

Query: 181 AR--NQPD----RCHIVDSA-HSFQSVATNILNIVWELVQK 214
                 PD       +++++  S + V   + +     +Q+
Sbjct: 164 FNDFEDPDYSQAHIKVLETSGKSIEQVHDMVWSTTSAFMQE 204


>gi|197123784|ref|YP_002135735.1| thymidylate kinase [Anaeromyxobacter sp. K]
 gi|196173633|gb|ACG74606.1| thymidylate kinase [Anaeromyxobacter sp. K]
          Length = 567

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 9/215 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           + +SFEGI+G+GKT   +L+   L+    +V   RE G   T AA   R +     + E 
Sbjct: 1   MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  A     +E V+RPAL  G + + DR L S  A            +++   
Sbjct: 61  SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQIFL 178
            +     PD  +++D+  D  L R++ R         D            +  + R+   
Sbjct: 121 AASGGTWPDLAVLVDVDPD--LARLRKRVGKILEGRADEPGSRKGLAGHGLQVRIREHLA 178

Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIVWELV 212
             A   P+    V +   S +++A  +   +   V
Sbjct: 179 AEAAGAPEAWLRVANEGRSLEALADLVAEAIAARV 213


>gi|124027289|ref|YP_001012609.1| thymidylate kinase [Hyperthermus butylicus DSM 5456]
 gi|123977983|gb|ABM80264.1| Thymidylate kinase [Hyperthermus butylicus DSM 5456]
          Length = 223

 Score =  131 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 18/221 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +++ FEGI+GAG TTH  LL   L+   Y V +  EP         RH+L      
Sbjct: 1   MARPVYVVFEGIDGAGTTTHARLLAEKLRLLGYCVELVEEPSKDVVGGVIRHMLRHG--- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F  +  A++FAA RL    ++         I++ DR   SS AYQ        +  D +
Sbjct: 58  PFHQDVLALLFAADRLLLQRSLEERLQGRSCIVVSDRSWISSLAYQTCELFPYAVDADWV 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++     PD  + +D+   I  +R+ +R  +RE         + +      R+ +  +
Sbjct: 118 YIVNKYAWRPDILVYIDVEPLIAFRRLASRGRVRELP-------ETLAALRALRESYRHV 170

Query: 181 ARNQPDRCHI---VDSAH-----SFQSVATNILNIVWELVQ 213
            +       +   V+ +          ++  I   V   ++
Sbjct: 171 IQRVSRVVPVVLWVEGSRNGVEKPIDKLSREIAVRVLAAIK 211


>gi|194246795|ref|YP_002004434.1| Thymidylate kinase [Candidatus Phytoplasma mali]
 gi|193807152|emb|CAP18590.1| Thymidylate kinase [Candidatus Phytoplasma mali]
          Length = 205

 Score =  131 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 15/177 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           L I FEGI+G GKTT I+ L + L+  + N  V +    G T    + R + L     + 
Sbjct: 2   LLIVFEGIDGTGKTTLINNLAQTLKTIQPNSKVIIINGLGSTNIGTSIREMFLF--NPKM 59

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQ 121
            +E    +  A  +     +I+P L    I+L DR+L S++AYQ        H  +  L 
Sbjct: 60  ISETRYFLSFANLIQIQNELIKPHLKTNTIILMDRYLGSNFAYQAYPFQIDPHYSIFQL- 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            I  + + P  T+++DL   I LKR        +   +D  E + +   ++  + + 
Sbjct: 119 -IQKKFLKPQITVLIDLEPKIALKR--------KGDLIDLIENQPLSYFQQVVKGYQ 166


>gi|317056618|ref|YP_004105085.1| thymidylate kinase [Ruminococcus albus 7]
 gi|315448887|gb|ADU22451.1| thymidylate kinase [Ruminococcus albus 7]
          Length = 218

 Score =  131 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 86/219 (39%), Gaps = 18/219 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----D 60
             I  EG++G+GK+T    L  + + K+  +     P     +     + L+  +    +
Sbjct: 4   KLIVLEGLDGSGKSTQFEKLSEYFKNKDVKLKAISFPDYEDPSSTLVKMYLNGEIAGSAE 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--LD 118
              A A +  +A+ R    +        +G ++L  R++ S+  YQ  +         L 
Sbjct: 64  AVNAYAASSFYASDRYISYKKYWEKDYNDGCLILAARYVTSNCIYQMTKLPEDEWENYLA 123

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            L++     +    PD  I LD+P++I  + +  RY   ES   D  E+ ++      R+
Sbjct: 124 WLEDYEYCKLSLPKPDKVIFLDMPIEISQRLLSARYGGDESKK-DIHEK-NIEFLHMCRK 181

Query: 176 IFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVW 209
               +   +     IV+ +      S +++   +  I+ 
Sbjct: 182 A--ALFTAEKQGWDIVECSCGNEPLSIEAIFNKLTEIIE 218


>gi|149246800|ref|XP_001527825.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447779|gb|EDK42167.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 237

 Score =  131 bits (330), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 86/232 (37%), Gaps = 35/232 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAARHVL 54
           M  G  I  EG++ +GK+T  SLL   L              + + P  T       +  
Sbjct: 1   MPRGQLILIEGLDRSGKSTQASLLVSKLGHASSSSSPPCSSKLLKFPDRTTPIGKLINEY 60

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           L+    +   +A  ++F A R + +   I   L +G  ++ DR++ S  AY   +++   
Sbjct: 61  LTNKEFQLDDQAAHLLFLANRWE-LNQEIHNLLNQGCFVVLDRYIYSGIAYTLAKNNLDD 119

Query: 115 LF----------------LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                             +D L         PD T+ L L ++   KR        +   
Sbjct: 120 SEANTSISRGKKSSNLASVDWLLGPDKGLPKPDLTMFLTLDLEEISKR--------KGWG 171

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDR-CHIVD-SAHSFQSVATNILNIV 208
            + +E +      K ++ FL I  +  D+   I+D    S + V   + +++
Sbjct: 172 NERYELQ--QFQAKVKRCFLQILNSNQDKSIEILDVGEKSIEEVTNQLWDVI 221


>gi|311697051|gb|ADP99924.1| thymidylate kinase-like protein [marine bacterium HP15]
          Length = 139

 Score =  131 bits (330), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 7/145 (4%)

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQE 127
           ++ +AAR DHV +VIRPAL  G+ ++ DRF+DS+YA Q    D+  HL   S ++I V  
Sbjct: 1   MLVSAARFDHVRSVIRPALASGQWVISDRFIDSTYALQVAVSDADLHLLFRSTRDIVVGP 60

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            +PD TIILDLP+ +       R   R    LD  E          R+  + +A  +P+R
Sbjct: 61  TLPDLTIILDLPLAVA----HGRREQRRDGVLDPAEAARD--FAVIREALIAVAHQEPER 114

Query: 188 CHIVDSAHSFQSVATNILNIVWELV 212
           CH++D+  S   VA +I  +V  L+
Sbjct: 115 CHVIDANQSPDGVARDIWRLVEPLL 139


>gi|289422838|ref|ZP_06424671.1| dTMP kinase [Peptostreptococcus anaerobius 653-L]
 gi|289156748|gb|EFD05380.1| dTMP kinase [Peptostreptococcus anaerobius 653-L]
          Length = 226

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 18/226 (7%)

Query: 3   SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58
           +G     E G +G+GK T    L   L    Y V     P     + A   + L+     
Sbjct: 2   AGKLFVIESGTDGSGKATQTKKLFDRLVEDGYRVRKVEFPNYDSDSSALIKMYLNGDFGD 61

Query: 59  -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQH 114
             D+  A   +  +AA R    +       + G I+L DR+  S+  +Q  +      + 
Sbjct: 62  KADDVDAYIASTFYAADRYASYKLGWEDFYLNGGIILADRYTTSNMVHQASKMDSTDDKE 121

Query: 115 LFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FLD L +          PD    LD+P+ +  K +++R +   S        +D+    
Sbjct: 122 KFLDWLDDFEYGLYKIPRPDGVFFLDVPLKVSAKLMEDRKNKFTSGDEKDIHERDLDYLA 181

Query: 172 KRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWELV 212
           +       +A     +   +D     +  S + +  +I + V E +
Sbjct: 182 RTYDNSKYVADKF--KWTQIDCTDGMAMRSVEDINEDIYSRVLESL 225


>gi|220918549|ref|YP_002493853.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956403|gb|ACL66787.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 567

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 9/215 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
           + +SFEGI+G+GKT   +L+   L+    +V   RE G   T AA   R +     + E 
Sbjct: 1   MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE  +  A     +E V+RPAL  G + + DR L S  A            +++   
Sbjct: 61  SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAIAGRGLPRAEVEAAVR 120

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQIFL 178
            +     PD  +++D+  D  L R++ R         D            +  + R+   
Sbjct: 121 AASGGTWPDLAVLVDVDPD--LARLRKRVGKILEGRADEPGSRKGLAGHGLQVRIREHLA 178

Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIVWELV 212
             A   P+    V +   S +++A  +   +   V
Sbjct: 179 AEAAAAPEAWLRVANEGRSLEALADLVAEAIAARV 213


>gi|301386509|ref|ZP_07234927.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13]
 gi|302062080|ref|ZP_07253621.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40]
 gi|302134676|ref|ZP_07260666.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 138

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 6/114 (5%)

Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           D++YAYQG      H  + +L++    ++ PD T++ DLPV+IGL R   R        L
Sbjct: 27  DATYAYQGGGRGLSHERIAALEQFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 80

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           D FE++     +  R  +L+ A+ +P R  +VD+A S   V  ++  ++ EL++
Sbjct: 81  DRFEQEGRAFFDAVRSTYLNRAKAEPARYRLVDAAQSLADVQASLDKLLPELLE 134


>gi|84995356|ref|XP_952400.1| thymidylate kinase [Theileria annulata strain Ankara]
 gi|65302561|emb|CAI74668.1| thymidylate kinase, putative [Theileria annulata]
          Length = 214

 Score =  130 bits (329), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 23/217 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I FEGI+ +GK+T I+LL + L  +N    V   P   TP  +  R  L +   + 
Sbjct: 8   RGKLIVFEGIDRSGKSTQINLLSQKLSEENIKNEVLSFPYKTTPTGKLLREYLRN-RDES 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--------SQ 113
              +A  ++F+A R + +  +I+  L  G  ++ DR+  S  AY    +          Q
Sbjct: 67  IPKQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAYSVGAEVRLLFYQVFPQ 125

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            L  +         V PD    +DL  +    R    +       L++ E          
Sbjct: 126 GLDFNWCLIPDTGIVEPDVVFYMDLAPECSSAR--GNFGSEIYENLEHMEN--------V 175

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            ++F           +I+ +    + +   I +I  +
Sbjct: 176 YEVFKRF--GNLSYWNIIKAHDDQKQIHHKIYSIAKK 210


>gi|111023286|ref|YP_706258.1| thymidylate kinase [Rhodococcus jostii RHA1]
 gi|110822816|gb|ABG98100.1| probable thymidylate kinase [Rhodococcus jostii RHA1]
          Length = 227

 Score =  130 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  I+ EG++GAGK T +  +   L  +   V     P  G +  A+ A   L     D 
Sbjct: 2   GKLIALEGLDGAGKRTLVGAVVGRLTEQGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R   V  +    L E  +++ DR++ S+ AY   R    +   F+ 
Sbjct: 62  SDSVYAMAVMFALDRSGAVGELAE-LLAEHDLVILDRYVASNAAYGAARLHQGADGEFVG 120

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +Q +    +    PD  + LD+PV +  +R + R S   S  LD +ER D  + E+  +
Sbjct: 121 WVQNLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTGE 179

Query: 176 IFLDIARNQ 184
           ++ ++A   
Sbjct: 180 VYRELAVKD 188


>gi|217031818|ref|ZP_03437321.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128]
 gi|298735556|ref|YP_003728077.1| dTMP kinase [Helicobacter pylori B8]
 gi|216946470|gb|EEC25072.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128]
 gi|298354741|emb|CBI65613.1| dTMP kinase [Helicobacter pylori B8]
          Length = 191

 Score =  130 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1   MYVALEGVDGAGKSTQVGLLKTRFK----NALFTKEPGGTKIGESLRRIALN---ENISE 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +F + R +HVE+VI+PAL E ++++ DR L S  AY              L  ++
Sbjct: 54  LARAFLFLSDRAEHVESVIKPALKEKRLIISDRSLISGMAYSQFSSLE-------LNLLA 106

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180
            Q V+P+  I+L +  +   +R+  +        LD  E +     + I +K +     +
Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +++  S +++   I   + 
Sbjct: 160 REKFGCEVLELNAKESVKNLHEKIAAFIE 188


>gi|322795260|gb|EFZ18065.1| hypothetical protein SINV_01400 [Solenopsis invicta]
          Length = 208

 Score =  130 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 80/214 (37%), Gaps = 18/214 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI  EG + AGK+T + +L   L            P          +  LS  ++
Sbjct: 2   LKRGAFIVLEGCDRAGKSTQVKMLINALNDLQIPAKARGFPNRKTPVGTILNSFLSKEIN 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E   ++F+A R +  +  +   L+ G  L+ DR+  S   Y           L+  
Sbjct: 62  -VPPETAHLLFSANRWE-CKEDMEKTLLSGVSLVMDRYAASGAVYTAANTG---RSLNWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q+  +  + PDC + L +         + +  LR     + FE       ++    + ++
Sbjct: 117 QQPDLGLLKPDCVMFLKVS--------KRQQELRSDWGKERFEH--DEFQQRVDANYEEL 166

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              + D   ++++     +V   IL     ++Q+
Sbjct: 167 ---KDDSWFVINADQDESTVHAEILQKTLSVIQE 197


>gi|238928063|ref|ZP_04659823.1| thymidylate kinase [Selenomonas flueggei ATCC 43531]
 gi|238884023|gb|EEQ47661.1| thymidylate kinase [Selenomonas flueggei ATCC 43531]
          Length = 231

 Score =  130 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 77/227 (33%), Gaps = 19/227 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           M  G     E  +G+GK T   LL + L R+ + V     P     A     + L     
Sbjct: 1   MARGKLFIIEAGDGSGKETQTRLLAQRLIREGHRVRAVAFPDYEADASMPVRMYLRGDFG 60

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113
              DE    A +  FA  R        R     G I+L DR+  S+  +Q  +    + +
Sbjct: 61  MQADEVNPYAASTFFAVDRYASYRMKWRQDYEAGTIILADRYTTSNMVHQAVKIRDAAER 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FLD L +     +   +PD    LD+      +R+    +  +    D  ER D    
Sbjct: 121 DAFLDWLDDFEFNKLGLPVPDAVFFLDMEP-CAAERLLTARAQAKGETPDIHER-DADYL 178

Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212
            +    ++ +          +    D A    + +   +   V + +
Sbjct: 179 RRTHDAYVLLTARCG--WVRIPSSADGAPLPIEEIHERLYAEVGKFL 223


>gi|313896786|ref|ZP_07830334.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974703|gb|EFR40170.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 229

 Score =  130 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 76/227 (33%), Gaps = 19/227 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           M  G     E  +G+GK T   LL   L+R  + +     P     +     + L     
Sbjct: 1   MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113
              D+  A A +  FA  R              G ++L DR+  S+  +Q  +   D+ +
Sbjct: 61  THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             FLD L ++    +   +PD    LD+      + +  R      A  D  ER D    
Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDMEPAAAQRLIAVRAEN-SGAAPDIHER-DADYL 178

Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212
            +    ++ +A         +    D A      +   +   V   +
Sbjct: 179 ARTHDAYVLLAARYG--WVRIPSSTDGAPLPIAEIHERLYREVQTYL 223


>gi|57506107|ref|ZP_00372029.1| thymidylate kinase [Campylobacter upsaliensis RM3195]
 gi|57015591|gb|EAL52383.1| thymidylate kinase [Campylobacter upsaliensis RM3195]
          Length = 193

 Score =  130 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 25/212 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EGI+  GK+T I LLK   +    D   T EPG T   E  R +LL+       +
Sbjct: 1   MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEYLRELLLNRPY-PISS 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +AE ++F A R  H E ++R    E K+++ DR + S  AY     +     L +L + +
Sbjct: 56  KAELLLFLADRNQHYEEILRE--NEQKLIISDRSIISGMAY---AKNFDLDILFTLNDFA 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ------IFL 178
           +    P   I L     +  +R+  +        LD  E++ V      ++       FL
Sbjct: 111 LNGFFPQKAIFLRGDEILLKERMGQKN-------LDDIEKRGVAYFINVQEKMEKVLNFL 163

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                   +   +D+  S +++   I   + +
Sbjct: 164 KF--KIDLKILELDAKDSVENLHEKIKEFIND 193


>gi|307692944|ref|ZP_07635181.1| putative thymidylate kinase [Ruminococcaceae bacterium D16]
          Length = 222

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 87/231 (37%), Gaps = 31/231 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58
           +G  I FEG +G+GK+T    L R + +   +      P     + A   + L+      
Sbjct: 2   AGRLIVFEGTDGSGKSTQFQALCRRVTQSGREYQKLVFPQYNEPSSALIRMYLAGEFGTH 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--SQHLF 116
             +    A +  +A  R   ++ V      +G ++L DR+  S+  +Q  + +   +  F
Sbjct: 62  PQDVNPYAASAFYAVDRYASLKKVWGEYYEQGGLVLTDRYTTSNAVHQAVKCAPQEREAF 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L +     +    PD  + LD+P +  ++ ++ R +   +            IHE  
Sbjct: 122 LRWLDDFEHDKLGLPRPDLVLYLDMPTERAVELLRRREAATHTKA---------DIHE-L 171

Query: 174 RQIFLDIARNQP------DRCHIV---DSA---HSFQSVATNILNIVWELV 212
              +L   R+            ++   ++     S + +   I ++   ++
Sbjct: 172 DTGYLAACRDSALQATQLLGWKVIPCVNAQGEVRSVEEIHEEIWSLAAPVL 222


>gi|312140676|ref|YP_004008012.1| dtmp kinase [Rhodococcus equi 103S]
 gi|311890015|emb|CBH49333.1| dTMP kinase [Rhodococcus equi 103S]
          Length = 220

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T +  +   L+    DV     P  G +  A+ A   L     D  
Sbjct: 1   MLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDLS 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
               A A++FA  R    + + R  +    +++ DR++ S+ AY   R  +     F+  
Sbjct: 61  ASVHAMAVMFALDRAGAADRL-RDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVGW 119

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++ +    +    PD  + LD+PV +  +R + R +   S  LD +E+ D  +  +  ++
Sbjct: 120 IENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYEK-DSGLQARTGEV 178

Query: 177 FLDIARNQ 184
           + ++A   
Sbjct: 179 YRELAAAD 186


>gi|315636925|ref|ZP_07892149.1| thymidylate kinase [Arcobacter butzleri JV22]
 gi|315478755|gb|EFU69464.1| thymidylate kinase [Arcobacter butzleri JV22]
          Length = 189

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 18/204 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++S EGI+ AGK+T +++L++       +   T+EPGGT      R + L  G +   +
Sbjct: 1   MYVSIEGIDTAGKSTQLNILEKKFP----NAIFTKEPGGTALGIKLRAMAL--GGEAKSS 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI+P   +  +++ DR + S  AY  + +  +   L  L  I+
Sbjct: 55  IAEMFLFLADRAEHIEEVIKP--NKNSLVISDRSMVSGIAYANQFEIDK---LVELNLIA 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++P   I+L+L  +    R+  + +       D  E + +      +    +  +  
Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKAN-------DSIELRGIDYLINIQNRMKETIKKL 162

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                 +D++   + +A  I + +
Sbjct: 163 NVNHIFIDASLKIEDIAKTIEDFL 186


>gi|157737212|ref|YP_001489895.1| thymidylate kinase [Arcobacter butzleri RM4018]
 gi|254808274|sp|A8ETF2|KTHY_ARCB4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|157699066|gb|ABV67226.1| thymidylate kinase [Arcobacter butzleri RM4018]
          Length = 189

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 18/204 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++S EGI+ AGK+T +++L++       +   T+EPGGT      R + L  G +   +
Sbjct: 1   MYVSIEGIDTAGKSTQLNILEKTFP----NAIFTKEPGGTALGIKLRAMAL--GGEAKSS 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE  +F A R +H+E VI+P   +  +++ DR + S  AY  + +  + +    L  I+
Sbjct: 55  IAEMFLFLADRAEHIEEVIKP--NKNSLVISDRSVVSGIAYANQFEIDKLIE---LNLIA 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              ++P   I+L+L  +    R+  + +       D  E + +      +    +  +  
Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKAN-------DSIELRGIDYLINIQNRMKETIKKL 162

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
                 +D++   + +A  I + +
Sbjct: 163 NVNHIFIDASLKIEDIAKTIEDFL 186


>gi|290462111|gb|ADD24103.1| Thymidylate kinase [Lepeophtheirus salmonis]
          Length = 214

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 82/226 (36%), Gaps = 27/226 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCG 58
           +  G FI  EG + +GKTT    L      ++ +    R P              L   G
Sbjct: 6   LKRGAFIVLEGCDRSGKTTLAKRL-----SQDPNFEFLRFPDRDSKLTGSLINSFL--TG 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             E   +   ++F+A R + V   I   L  GK ++CDR+  S  AY   +        D
Sbjct: 59  AKEMCGQLIHLLFSANRWEKVPQ-ILSTLDSGKHIICDRYAYSGIAYSSSKPGMSF---D 114

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                      PD  + LD+  +  LKR             + +E+  V    K R I+ 
Sbjct: 115 WCANSDNGLPTPDLILFLDVSPEEALKR--------GGFGDEVYEK--VEFQAKVRDIYS 164

Query: 179 DIARNQPDRCHIV--DSAHSFQSVATNILNIVWE-LVQKRVSPLSS 221
                +      V  D   S   + T +  ++ + LV++R SP S 
Sbjct: 165 KRLFGKGGEWKWVSTDG-KSLDELYTELRTLIEDTLVKERDSPPSP 209


>gi|308805831|ref|XP_003080227.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
 gi|116058687|emb|CAL54394.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri]
          Length = 1006

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 18/225 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  + FEG +  GK+T    L + L+++     + R P  T          L    D 
Sbjct: 357 SRGALVLFEGADRCGKSTQARRLVKTLEQRGVRAELWRYPDRTTKTGEMIDAYLRSESDT 416

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A A  ++FAA R +  + ++   L +G  L+CDR+  S  A+   +   + L L   +
Sbjct: 417 ADA-AIHLLFAANRWE-KKALMERKLADGVTLVCDRYSYSGCAFTAAK-GVEGLDLTWCK 473

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD  + L+L ++   +R             + +E     +    +++F  + 
Sbjct: 474 APEVGLPRPDALMYLELSLEDAARR--------GGFGEERYE--TTEMQRAVKEMFESM- 522

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS--PLSSKKD 224
             +P    ++D+    + +   +L I    +++  S  PL +  D
Sbjct: 523 -REP-WWDVIDANRDEEVIEREVLEIALGAIERAKSGEPLGTLWD 565


>gi|146420481|ref|XP_001486196.1| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 215

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 21/214 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GKTT   +L   +   +    + + P  +       +  L+      
Sbjct: 2   RGHLILIEGLDRSGKTTQTQILHNAIPSSS----LIKFPDRSTNIGTIINQYLTDHNFSL 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFLD 118
             +A  ++F+A R +   + I   L  G  ++ DR++ S  AY   +       +   ++
Sbjct: 58  SDQAAHLLFSANRWELAAS-IEDQLQAGHTVIMDRYIYSGIAYSLAKLETSSLPEMASVE 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L         PD TI L L +     R        +S   + +E+      E  ++ FL
Sbjct: 117 WLYAPDRGLPKPDVTIFLTLDIAEMAAR--------KSWGEERYEQTK--FQEVVKRCFL 166

Query: 179 DIARNQPD-RCHIVDSAH-SFQSVATNILNIVWE 210
            +     D    IVD        VA  I  +V E
Sbjct: 167 KVLDPHADPSVVIVDVNKLGIDEVALKIWTVVEE 200


>gi|16081254|ref|NP_393560.1| thymidylate kinase [Thermoplasma acidophilum DSM 1728]
 gi|13629142|sp|Q9HLZ2|KTHY_THEAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|10639227|emb|CAC11229.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 193

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 36/218 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+GAGKTT    +   L  + Y V++T+EP                  +  G 
Sbjct: 1   MFIAIEGIDGAGKTTLARGIGNMLLGEGYRVYMTKEPT-------------DGMENYAGD 47

Query: 65  EAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------DSSQHLF 116
             E  + F   R  H   + R  +  G+I++CDR++ SSYAYQ E              +
Sbjct: 48  GVELFLKFTINRYAHQREIDRH-IKNGEIVICDRYIRSSYAYQFEGIAEFFGNSEKAWEW 106

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +DS+ EI   ++ PD  I +D+  +  ++R+  R          +FE +  +     RQI
Sbjct: 107 MDSVSEII--KIRPDVQIYVDVDEETAMERISRRGLRNP-----HFENEQKL--RSVRQI 157

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +     +      IVD     +++ +     +   +++
Sbjct: 158 YKGFQWD-----LIVDGGRDKEAIISETFEKIIARLRQ 190


>gi|257057066|ref|YP_003134898.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
 gi|256586938|gb|ACU98071.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
          Length = 220

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 11/217 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  +  EG++GAGK T    L   L+     V     P  G    A+  R  L     D 
Sbjct: 2   GRLVVVEGLDGAGKRTLTESLTAALREHGATVTTMTFPRYGRDVHADLVREALHGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLD 118
                  A+++A  R     + IR AL E  ++L DR++ S+ AYQ    R       + 
Sbjct: 62  AESVYGMAVLYALDRRG-ARDDIRRALDEHDVVLLDRYVASNAAYQAARLRQGVDGPVVR 120

Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++E+ +      +PD  ++L +PV++  +R   R     S   D FE  D  +  +  +
Sbjct: 121 WVRELEIDRFGLPVPDTQLLLRVPVEVAAERAVARERQDTSRTRDAFES-DDALQARCAR 179

Query: 176 IFLDIARNQP-DRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ ++A +       ++D   S  +    ++ +  EL
Sbjct: 180 VYDELAASHWLSEWRVLDGTRSVAANREAMVVLAKEL 216


>gi|58580054|ref|YP_199070.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84622050|ref|YP_449422.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188578974|ref|YP_001915903.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|73920833|sp|Q5H5T5|KTHY_XANOR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|123523407|sp|Q2P8H9|KTHY_XANOM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|229621848|sp|B2SS96|KTHY_XANOP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|58424648|gb|AAW73685.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365990|dbj|BAE67148.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188523426|gb|ACD61371.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 227

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 39/233 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I+ EGI+GAGKTT    L   L+     V +++EP   P     R    S      
Sbjct: 8   GGLLIAIEGIDGAGKTTLARRLTTTLEAAGARVVLSKEPTNGPWGTKLRQ---SAATGRL 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A+ EA +    R +HV+ +I PAL  G I++ DR+  S  AYQG         L+ L  
Sbjct: 65  SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLE-LNA 123

Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +              P              GL R++ R         ++FE +D +  E
Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           + R IF  +    P + H+VD++    SV      I+   +  R+S   +  D
Sbjct: 163 RCRTIFAGL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGAPAD 212


>gi|161529215|ref|YP_001583041.1| thymidylate kinase [Nitrosopumilus maritimus SCM1]
 gi|160340516|gb|ABX13603.1| thymidylate kinase [Nitrosopumilus maritimus SCM1]
          Length = 193

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 83/209 (39%), Gaps = 19/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFG 63
           + I  EG + AGK T  ++L++ L+++     +   P   T   +  R  L   G  +F 
Sbjct: 1   MIIVIEGGDQAGKLTQSTMLEKALKKRKIKTKLFHFPDYKTHIGKEIRQYL--DGKRKFP 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +    + +A R + +E  I+ A  +  +L+ +R+  S+  Y       +      L+ +
Sbjct: 59  PQVIHCLLSANRWEKLEQ-IKTAQEKNSVLIMNRYYHSNLVYGLANGMKE----KWLESL 113

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                  D  I+LD+       R        +    D FE+ +     K  +I+   A+ 
Sbjct: 114 DAGLPKADLVILLDVTQKESFNR--------QKTNRDKFEK-NEEFLRKISRIYKTTAKK 164

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R  I+D+  S Q V   I+    + +
Sbjct: 165 --KRWKIIDATKSKQEVHEEIMKTFSKKI 191


>gi|148264612|ref|YP_001231318.1| thymidylate kinase [Geobacter uraniireducens Rf4]
 gi|146398112|gb|ABQ26745.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 227

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 22/220 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I  EG +G+G++T + LLK +L+ K +          T  +E           +  
Sbjct: 17  AGKLIVIEGADGSGRSTQMELLKDYLEGKGHATVNVGLLRSTLVSEELNEA---KQGNVL 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G    ++ +A    D +EN I PA+  G I+L DR++ +  A       +   ++ +L  
Sbjct: 74  GEITRSLFYATDFADQLENRIIPAMKAGFIVLADRYIYTLMARDIV-RGADRDWVRALYG 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQ---IFL 178
           I+   V+PD  I L +     ++R     + R+++ LDY+E   D+ +          + 
Sbjct: 133 IA---VVPDLVIYLRVSPAQLVER-----NFRKNSTLDYWEAGMDLGLSRDIFDSFMRYQ 184

Query: 179 DIARNQPD------RCHIVDSAHSFQSVATNILNIVWELV 212
            + + +          H+V+   S +S +  I   V +L+
Sbjct: 185 KLIQKEFSLLQQEYGFHVVNGNRSIRSASGEITARVEDLL 224


>gi|308472179|ref|XP_003098318.1| hypothetical protein CRE_07671 [Caenorhabditis remanei]
 gi|308269166|gb|EFP13119.1| hypothetical protein CRE_07671 [Caenorhabditis remanei]
          Length = 210

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 77/216 (35%), Gaps = 21/216 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G+ I FEG++ +GK+T    L   L  + +   V        +P  +     L     
Sbjct: 6   KRGVLIVFEGLDRSGKSTQAKRLVESLNKRAEGSAVLQAFPDRSSPIGKLIDQYLK--KE 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    +  ++F+A R      +IR  + +G  ++CDR+  S  AY   +   +      
Sbjct: 64  IDLDEHSLHLMFSADRF-LKNQMIRENIAKGIDVICDRYCYSGVAYSLAKGLPEQ----W 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++   V    PD  +  D+   +  +R             +  E     + +K   +   
Sbjct: 119 VRSSDVGLPKPDAVLFFDVSPAVAAQR--------GGFGAERLE--TATMQQKVAAVMPT 168

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +          V++     +V  ++  +   L +++
Sbjct: 169 L--RDDSFWKTVNADGDLDTVEKDVFRLYENLNREK 202


>gi|17535647|ref|NP_496151.1| hypothetical protein R53.2 [Caenorhabditis elegans]
 gi|3024082|sp|Q22018|KTHY_CAEEL RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|3879168|emb|CAA91347.1| C. elegans protein R53.2, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 218

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 31/234 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR 51
             GL I FEG++ +GK+T    L   + +K+ +          V        +   +   
Sbjct: 6   KRGLLIVFEGLDRSGKSTQAKRLVESINKKSTESGDASSSPSAVLQAFPDRSSSIGKLID 65

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
             L      +    A  ++F+A R      +IR  + +G  ++CDR+  S  AY   +  
Sbjct: 66  QYL--RKEIDMDEHALHLLFSADRF-SKNQMIRDNIAKGIDVICDRYCYSGVAYSLAKGL 122

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +      ++   V    PD  +  D+  ++  +R             +  E     I +
Sbjct: 123 PEQ----WVRSSDVGLPKPDAVLFFDVSPEVAAQR--------GGFGEERLE--TATIQQ 168

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           K   +   +          V++     SV  N+  I   L   R  P  S + I
Sbjct: 169 KVAAVMPTL--RDDAYWKTVNADGDLDSVEKNVFRIYENL--DREKPFESLEKI 218


>gi|325108330|ref|YP_004269398.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305]
 gi|324968598|gb|ADY59376.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305]
          Length = 228

 Score =  129 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 88/218 (40%), Gaps = 17/218 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVL--LSCGVDE 61
           FI+ EGI+G+GK T  + L   L  +         P    T   +     L      +D 
Sbjct: 4   FIAIEGIDGSGKGTQTAALCDHLNAQGLRCDTITFPRYAETLLGKQIGRFLDGQFGALDH 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
                 ++++A  R +   ++I   L    +L+ DR++ S+ A+QG R     +  FL  
Sbjct: 64  LHPVPISLMYATERYES-RSLIEEKLNNCDVLIADRYVGSNLAHQGARLEGDERAEFLKF 122

Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++++  +      P+  ++LDLP D    RV  + +   +  +      +       R++
Sbjct: 123 IEKLEYELFAVPRPELVLLLDLPADASAARVAKKKARDYTQQVTDLHESNHEYLADVREV 182

Query: 177 FLDIARNQPDRCHIVD------SAHSFQSVATNILNIV 208
           +L+++    +    V       +  S   +   + +IV
Sbjct: 183 YLELSETF-ENWSRVSCLSPNGADRSIDEIQQELRDIV 219


>gi|157956089|gb|ABW06432.1| thymidylate kinase [Wheat blue dwarf phytoplasma]
          Length = 209

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 20/211 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I  L+  L+       + +  G +   +  R + L+    +   
Sbjct: 3   KLIVFEGLDGSGKTSLIQYLQPQLKT---PHQLYQGLGSSSIGKEIRDLFLN--FQQVDY 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +  A        + +    + ++++ DR+L S++AYQ    S +   L  L++I 
Sbjct: 58  LTRFYLSLANMAQIQAELFK----KNQLIILDRWLPSNFAYQLFPFSKEKKQLFPLKKIF 113

Query: 125 VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                   + PD  I LD+   IG  R + + + +     D  ER+ +   +  RQ +  
Sbjct: 114 KLNHETILIKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERESLTYFQTVRQGYNH 169

Query: 180 IARNQPDRCH--IVDSAHSFQSVATNILNIV 208
              +        I++ + S ++    I+  +
Sbjct: 170 YLTHYTSGFKNLILNGSDSIKANVKQIIKQI 200


>gi|159467731|ref|XP_001692045.1| hypothetical protein CHLREDRAFT_128562 [Chlamydomonas reinhardtii]
 gi|158278772|gb|EDP04535.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 214

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 16/212 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I FEG +  GKTT  S +   L+ +  D  + R P  + +  AA +  LS    + 
Sbjct: 8   RGALIVFEGGDRCGKTTQCSKMVERLKSQGVDAVMWRFPDRSTSIGAAINAYLS-NQSQL 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F A RL+  + ++R  L  G  L+ DR+  S  AY   +    HL +D  + 
Sbjct: 67  DDAVIHMLFVANRLEKRDEMLR-LLAGGTTLVLDRYSYSGVAYTAAK-GVPHLSIDYCKS 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + V     D  + + +  +    R             + +E+  V    +  + F  +  
Sbjct: 125 LEVVLPAADLVVHMSMSAEATAAR--------GGYGEERYEK--VEFQARVMEAFGQLRD 174

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              +R   +D+A +  ++   +  +V  +V++
Sbjct: 175 ---ERWAAIDAAGTIDAIHEQVAAVVEPVVRR 203


>gi|326792104|ref|YP_004309925.1| thymidylate kinase [Clostridium lentocellum DSM 5427]
 gi|326542868|gb|ADZ84727.1| thymidylate kinase [Clostridium lentocellum DSM 5427]
          Length = 203

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 13/209 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F +F+G  G GK+T I+ +   LQ +  +V  T EP      +  R +      +    E
Sbjct: 4   FFAFDGPNGVGKSTLINEVSNMLQERGIEVLNTSEPSTLEIGKFTRRI-----SEYVRKE 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A + AA R +H+  VI+PAL E +I+LCDR++ SS   QG     +   L+    +  
Sbjct: 59  TLACLVAADRYEHINKVIQPALDEKRIVLCDRYIASSLVLQGIDGVDEQFILNLCNNM-- 116

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             ++PD   IL        KR++ R +L         E  +V   +      + I  N  
Sbjct: 117 --ILPDIYFILIASPYTIRKRLKERENLTRFERESKIEYLEVEYFKNA----VTILENMG 170

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
              + +++ +S ++    +L  +   +++
Sbjct: 171 IEVYEINTDNSPENCIQQVLEAILVKIKQ 199


>gi|315925896|ref|ZP_07922101.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315620717|gb|EFV00693.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 231

 Score =  128 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 74/224 (33%), Gaps = 17/224 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57
            +G  I  EG++G+GK T    L   L  +   V     P     + A     L+     
Sbjct: 5   QAGKLIVIEGVDGSGKQTQSQRLYGRLAAQGKRVLRVAYPRYDEDSSAMVRHYLAGDFGE 64

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QH 114
             D       A  FAA R       I P L  G +++ DR+  ++  +Q  + +    + 
Sbjct: 65  DPDAVSPYVAATFFAADRYASYRQEIGPFLAGGGLVIADRYTTANMLHQAGKIADAAARQ 124

Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FLD L++     +    PD  I LD+P +     +  R +                  E
Sbjct: 125 AFLDWLEDYEFRLLGLPRPDAVIYLDMPPEASGTLMAGRANKMTGKAAKDIHESHPAYLE 184

Query: 172 KRRQIFLDIARNQPDRCHIVDS-----AHSFQSVATNILNIVWE 210
           +  +    +          +D        S  ++   +   + +
Sbjct: 185 RAYRAGRALVARYG--WTRIDCLKDGVLQSVDAIGGAVEAALRD 226


>gi|125974597|ref|YP_001038507.1| thymidylate kinase [Clostridium thermocellum ATCC 27405]
 gi|256004041|ref|ZP_05429026.1| thymidylate kinase [Clostridium thermocellum DSM 2360]
 gi|281419122|ref|ZP_06250139.1| thymidylate kinase [Clostridium thermocellum JW20]
 gi|125714822|gb|ABN53314.1| thymidylate kinase [Clostridium thermocellum ATCC 27405]
 gi|255991964|gb|EEU02061.1| thymidylate kinase [Clostridium thermocellum DSM 2360]
 gi|281407271|gb|EFB37532.1| thymidylate kinase [Clostridium thermocellum JW20]
 gi|316941715|gb|ADU75749.1| thymidylate kinase [Clostridium thermocellum DSM 1313]
          Length = 227

 Score =  128 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 81/229 (35%), Gaps = 20/229 (8%)

Query: 3   SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57
            G  I  E G + +GK T  + L   L ++ Y V     P     + A   + L+     
Sbjct: 2   KGKLIIIESGADASGKATQTNKLYERLVQEGYKVKKITFPNYDSDSSALVKMYLNGDFGK 61

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115
             ++      +  +A  R          A  +G I+L DR+  S+  +Q  +        
Sbjct: 62  DPNDVSPYVASTFYAVDRFASYRTEWGQAYNDGWIILADRYTTSNMVHQAAKIKDMEEKD 121

Query: 116 -FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIH 170
            FLD L     +     +PDC I LD+P     + ++ R +        D  ER D  + 
Sbjct: 122 RFLDWLWNFEFEIYKLPVPDCVIFLDMPPSFSRELMKERANKFTGEQKKDIHERNDEYLV 181

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHS-----FQSVATNILNIVWELVQK 214
           E  R   L +A+        ++            +   +   V  ++++
Sbjct: 182 ESYRNS-LYVAKKY--NWIKIECVKDGVLKKIDEIQKEVYEAVSGIIRQ 227


>gi|261367061|ref|ZP_05979944.1| dTMP kinase [Subdoligranulum variabile DSM 15176]
 gi|282571180|gb|EFB76715.1| dTMP kinase [Subdoligranulum variabile DSM 15176]
          Length = 223

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 84/226 (37%), Gaps = 21/226 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I FEG++G+GK T  +L  + L+    D+     P     + A   + LS       
Sbjct: 2   GKLIIFEGLDGSGKGTQTALTAQKLKAHGVDLRQITFPNYESDSSALVKMYLSGQFGDKP 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FL 117
           D+  A A +  +A  R    +         G ++L DR+  S+  +Q  +    H   FL
Sbjct: 62  DDVNAYAASSFYAVDRFASYKTDWGDFYRAGGLILSDRYTTSNAVHQCAKLPPMHWDGFL 121

Query: 118 DSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + L +     +    PD  + L +  ++  K +  RY   ES      + KD     + R
Sbjct: 122 NWLFDFEYKKIGIPAPDAVVYLAVDPEVSQKLMDQRYHGDESKKD--IQEKDREYIARSR 179

Query: 175 QIFLDIARNQPDRCHIVDSA--------HSFQSVATNILNIVWELV 212
                 A+      + ++           S + +   IL  +  ++
Sbjct: 180 AAAEYCAKMFG--WYRIECTEGQDVKTIRSVEDINAEILAKIQPIL 223


>gi|307188610|gb|EFN73327.1| Thymidylate kinase [Camponotus floridanus]
          Length = 209

 Score =  128 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 75/213 (35%), Gaps = 18/213 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG + AGK+T + +L   L            P       +     LS  ++ 
Sbjct: 4   KRGALIVLEGCDRAGKSTQMKMLINALNDLRIPAENIAFPNRKTPVGSILDSFLSKKIN- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +  +  +   L+ G  L+ DR+  S   Y           L+  Q
Sbjct: 63  VPPETAHLLFSANRWE-CKEDMEKTLLSGVTLIVDRYAASGAVYTAANTG---RSLNWCQ 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  +    PDC + L +         + +   R     + FE       ++    +  + 
Sbjct: 119 QPDLGLPKPDCVMFLKVS--------KRQQEQRSDWGKERFEH--DEFQQRVNANYEKLR 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               D    +++     +V + IL +   ++Q+
Sbjct: 169 D---DTWITINADQDESAVHSEILRMALSVIQE 198


>gi|269986147|gb|EEZ92460.1| thymidylate kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 202

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 16/208 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEF 62
           G  I  EGI+GAGK T   +LK  L+ +   V V   P  +    E  +  L      + 
Sbjct: 3   GKLIVIEGIDGAGKATQAKILKEQLESQGKTVSVYSYPDYSSVYGERIKSFLYKKIDLKV 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 +++    +     +I   + +G  +L DRF  S+ AYQ     S        +E
Sbjct: 63  DEL--FMLYLIDMVKDRNRIIED-IKKGNDVLIDRFFFSTIAYQSAGGFSYETG----KE 115

Query: 123 ISVQEVMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                 MP  T    +++PVDI ++R + +    +   +D FE   +       +++  +
Sbjct: 116 FVKLLGMPPITVVFYINVPVDISMQRKEKQKGKMD---VDKFESNKM-FLSNVSKVYDQL 171

Query: 181 ARN--QPDRCHIVDSAHSFQSVATNILN 206
                   +   +D + S + +++ I  
Sbjct: 172 KSENFYAKKWVEIDGSKSIEEISSLIKE 199


>gi|268679911|ref|YP_003304342.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617942|gb|ACZ12307.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946]
          Length = 194

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 14/207 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++ FEG++ +GK+T +SL      +++  VH T+EPGGTP     R +LL  G  +   
Sbjct: 1   MYVIFEGVDTSGKSTQVSL----FAKRHPHVHATKEPGGTPTGSKLREMLL-GGELKGSF 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123
            AE  +F A R  H + V++P L   KI++ DR   S  AY     S     FL  +  +
Sbjct: 56  NAELFLFLADRAFHYDTVVKP-LRHEKIVMSDRGFLSGIAYACANHSDIDGTFLLQMNRL 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +++E  P+  ++  +  +     ++ R  ++E    D  E + V    + + I   +A+ 
Sbjct: 115 ALEEDYPEKMVLF-VSNE---HLIKERLGMKE---HDAIEERGVSYLLQIQDIMRRVAKT 167

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
            P +   VD+A   +++   I   + +
Sbjct: 168 LPIKVLEVDAAQDIETLYRQIEEFLND 194


>gi|326428009|gb|EGD73579.1| thymidylate kinase [Salpingoeca sp. ATCC 50818]
          Length = 213

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 79/216 (36%), Gaps = 21/216 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I  EG +  GK+T   LL   L    ++  + R P  +          L   ++ 
Sbjct: 3   RRGVLIVLEGTDRCGKSTQCKLLVEKLASLGHEAKLMRFPERSTVIGGVIDKYLRKEIE- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R + V   ++ AL  G  L+ DR+  S  A+   +     L +D  +
Sbjct: 62  LDDHAAHLLFSANRWELVSQ-MKQALKSGVSLVIDRYAFSGVAFTSAKG----LDMDWCK 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  I L+L      KRV            + +E        K +  + D+ 
Sbjct: 117 SPDANLPSPDLHIHLELDPTEAAKRV--------GFGSERYEVT--EFQAKVKAKYEDLY 166

Query: 182 R---NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 P R  +  +  S + V   +L +  E +Q 
Sbjct: 167 ASMTRPPRRIDV--AGLSIEDVHAKVLELALEQLQD 200


>gi|13541004|ref|NP_110692.1| thymidylate kinase [Thermoplasma volcanium GSS1]
 gi|23821802|sp|Q97CC8|KTHY_THEVO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|14324388|dbj|BAB59316.1| thymidylate kinase [Thermoplasma volcanium GSS1]
          Length = 190

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 34/215 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+GAGKTT    L   L+++ + V +TREP                   E   
Sbjct: 1   MFIAVEGIDGAGKTTLAKSLSSLLEKEGFRVFLTREPTD------------DIRNYEGDD 48

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------DSSQHLFL 117
               I F   R  H +  IR  L EG +++ DR++ SSYAY+ +        +     ++
Sbjct: 49  VELFIKFTLDRYKHQKE-IRKKLNEGFVVISDRYIRSSYAYEMKGAAAALGSEEKAKEWM 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D +  I    + PD  I++ + V +GL R+  R     +  + +FE++     E+  +  
Sbjct: 108 DCVSNIIT--IRPDINILVQVDVQVGLDRISKR-----NGTITHFEQR-----ERLNEA- 154

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L I  +      + D       +   +   +   +
Sbjct: 155 LKIYNSFDWDIKV-DGTDPLDKITNEVYLYLKNKI 188


>gi|302543876|ref|ZP_07296218.1| dTMP kinase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461494|gb|EFL24587.1| dTMP kinase [Streptomyces himastatinicus ATCC 53653]
          Length = 256

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 20/211 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G+F++ +G  G GK+T  + +   L+      H TREP  T     AR      G D++
Sbjct: 59  TGMFVTIDGPGGVGKSTLTAAVVAELRAACVTAHATREPSDTALGRLARQ-----GTDDY 113

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A A + AA R  H+E+ IRPA+  G +++CDR++ SS   Q      +    D + E
Sbjct: 114 RGMAMACLIAADRYQHLEDEIRPAVARGDVVVCDRYVASSLVLQVMDGVGR----DLVWE 169

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    MPD  +IL+   D+  KR+  R           +ER+     ++    F + AR
Sbjct: 170 LNRHADMPDLAVILNARDDVIEKRLTER------GAHSRYERE-FGSSQRECAAFREAAR 222

Query: 183 -NQPDRCHIV--D-SAHSFQSVATNILNIVW 209
                  H+V  D +    + +A +I+  + 
Sbjct: 223 FLMAAGVHVVQFDVTTEGPERIARDIVAAIR 253


>gi|302519849|ref|ZP_07272191.1| thymidylate kinase [Streptomyces sp. SPB78]
 gi|302428744|gb|EFL00560.1| thymidylate kinase [Streptomyces sp. SPB78]
          Length = 216

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 15/164 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G FI+ +G  G GK+T ++ L   L+ +   VH T EP  +P  +  R        D
Sbjct: 1   MTAGRFITLDGPGGVGKSTTVAALAGLLRDQGEHVHTTTEPSTSPLGQFTR-----GHAD 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    A A + AA R DH+   IRP L  G  ++CDR+L S+   Q      +   LD  
Sbjct: 56  QISGHALACLVAADRYDHINTEIRPRLDAGDTVVCDRYLASTLVVQRLDGVPERFLLD-- 113

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
             ++   V+PD  ++L         R+  R +         FER
Sbjct: 114 --LNADIVLPDVAVLLTAAPGTITDRLTGRGAHH------RFER 149


>gi|237736219|ref|ZP_04566700.1| thymidylate kinase [Fusobacterium mortiferum ATCC 9817]
 gi|229421772|gb|EEO36819.1| thymidylate kinase [Fusobacterium mortiferum ATCC 9817]
          Length = 227

 Score =  127 bits (321), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 81/224 (36%), Gaps = 13/224 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G  I  EG + +GK T    L   L  +   V     P     A     + L+    +
Sbjct: 4   NMGKLIVIEGTDSSGKETQTKKLYERLANEVEKVRKISFPNYESPACEPVKMYLAGAFGD 63

Query: 62  ----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQH 114
                     + +FA  R    +         G I++ DR+  S+  +Q  +      + 
Sbjct: 64  NALNVNPYPVSTMFAIDRYASYKMDWESFYNAGGIIVTDRYTTSNMVHQASKIENIDEKS 123

Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +L  L+++    +    PD  I L++P ++ +K ++ R +            KD    +
Sbjct: 124 KYLGWLEDLEYNKMGIPKPDLVIFLNMPTEMAVKLMEARKNKITGEEKKDIHEKDTSYLK 183

Query: 172 KRRQIFLDIARNQP-DRCHIVDSAH--SFQSVATNILNIVWELV 212
           K      DIA+         V++    + + +   I  +V E++
Sbjct: 184 KSYDNACDIAKKYNWQEIKCVENKRLKTIEEIGEEIYTLVKEIL 227


>gi|307243785|ref|ZP_07525917.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678]
 gi|306492839|gb|EFM64860.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678]
          Length = 233

 Score =  127 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 79/230 (34%), Gaps = 16/230 (6%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG- 58
           M   +F   E G +G+GK T   LL   L+   Y V     P     + A   + L    
Sbjct: 1   MQGSVF-VIESGTDGSGKATQTKLLYDRLKADGYKVIKVSYPNYDSDSSALVKMYLRGDF 59

Query: 59  ---VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS 112
               D+  A   +  +AA R    +        EG I++ DR+  S+  +Q  +      
Sbjct: 60  GKKADDVDAYIASTFYAADRYASYKTEWEDFYQEGGIVIADRYTTSNMVHQASKMDDIEE 119

Query: 113 QHLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +  FLD L +          P     LD+PVD+    +++R +   +         D   
Sbjct: 120 RASFLDWLDQYEYGLYKLPRPREVYFLDVPVDVSQDLIRDRKNKFTNESQKDIHESDKDY 179

Query: 170 HEKRRQIFLDIARNQPDRCHI-VD---SAHSFQSVATNILNIVWELVQKR 215
             K  +    +A          +D   +  S   +   I   V   ++ +
Sbjct: 180 LVKTYENSKFVADKYQWHIVKCIDQDRNMRSVDQIHEEIYTRVISAIESK 229


>gi|226365793|ref|YP_002783576.1| thymidylate kinase [Rhodococcus opacus B4]
 gi|226244283|dbj|BAH54631.1| thymidylate kinase [Rhodococcus opacus B4]
          Length = 227

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  I+ EG++GAGK T +  +   L  +   V     P  G +  A+ A   L     D 
Sbjct: 2   GTLIALEGLDGAGKRTLVGAVVDRLTERGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R   V  +    L    +++ DR++ S+ AY   R   ++   F+ 
Sbjct: 62  AESVHAMAVMFALDRSGAVGEL-SDLLAGHDLVILDRYVASNAAYGAARLHQAADGEFVG 120

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ +    +    PD  + LD+PV +  +R + R S   S  LD +ER D  + E+  +
Sbjct: 121 WVENLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTGE 179

Query: 176 IFLDIARNQ 184
           ++ ++A   
Sbjct: 180 VYRELAVKD 188


>gi|157116910|ref|XP_001652904.1| Thymidylate kinase, putative [Aedes aegypti]
 gi|108883432|gb|EAT47657.1| Thymidylate kinase, putative [Aedes aegypti]
          Length = 249

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 18/212 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG + AGKTT    +   L    +       P  +    A  +  L+   D 
Sbjct: 45  KRGALIVLEGCDRAGKTTQCKRIVESLNSAGHKAKFMNFPDRSTQFGALINSYLTSK-DN 103

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F  EA  ++F   R +  +N +   L  G  L+ DR+  S  A+   +     L +D  +
Sbjct: 104 FTDEAIHLLFTLNRWE-AKNEMERLLRSGVTLIVDRYSYSGVAFSAAKG----LNMDWCK 158

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  ++L L  +   KR             + +E     + +K  + F  + 
Sbjct: 159 APETGLPKPDLVLLLTLTAEAMAKR--------GGFGQERYE--VPELQKKVMEKFHTL- 207

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                   +VD+     +++  +  +V + ++
Sbjct: 208 -KDDSYWKVVDADKKEDALSLELCEMVLDSME 238


>gi|118474238|ref|YP_892065.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40]
 gi|254808284|sp|A0RPD2|KTHY_CAMFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|118413464|gb|ABK81884.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40]
          Length = 192

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 18/207 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++FEG++G GK+T ISLLK F      D  +T+EPGGT      R  LL     +   
Sbjct: 1   MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123
           + E  +F A R +H E V++P      ++L DR   S  AY    D S     L  L + 
Sbjct: 56  KTEIFLFLADRAEHYEKVLKPNYAN--LVLNDRSFVSGMAYAMANDSSLDIGLLLDLNKF 113

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++   + D  + L     +   R+ +R +  E       E + +    +  Q F+ I  +
Sbjct: 114 ALNSDLGDKFVFLKADEILLRNRLFSRGTSDE------IEMRGIEYLMRV-QGFMSIILS 166

Query: 184 QPDRCHI--VDSAHSFQSVATNILNIV 208
              +  +  +D++     +   I   +
Sbjct: 167 D-LKFDVLEIDASLEVLEIQEKIRKFI 192


>gi|39939038|ref|NP_950804.1| hypothetical protein PAM_552 [Onion yellows phytoplasma OY-M]
 gi|39722147|dbj|BAD04637.1| hypothetical protein [Onion yellows phytoplasma OY-M]
          Length = 138

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKTT I  +++ L+++  +V   +  G +   +  R + L+    +   
Sbjct: 2   KLIVFEGLDGSGKTTLIQKVRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT--NAQLKP 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++  A      E  I+P L   KI+L DR+L S++AYQ    +    +      ++
Sbjct: 60  LTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNY-QLFNLLN 118

Query: 125 VQEVMPDCTIIL 136
            Q + PD T+ +
Sbjct: 119 KQFIKPDMTLFI 130


>gi|261330431|emb|CBH13415.1| thymidylate kinase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 345

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 31/229 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVD 60
           G  I FEG +GAGK T    +++ L ++         P       +  R VL      + 
Sbjct: 128 GAVIVFEGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLSGERGALH 187

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
           +   +  +++F+  R D +  + R  L  GK +L DR+  S++ +Q  +  +S +  F+ 
Sbjct: 188 DLDPKLFSLLFSLNRFDTLPEL-RYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIR 246

Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            L+++ ++ +    PD  + LDLP    L     R   RES  LD  E   +   E  RQ
Sbjct: 247 HLEQLELEWLKLPPPDVALYLDLPPAAALV-AMQRDEKRES--LDIHETAGLSYKENVRQ 303

Query: 176 IF------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +            ++   ++ +R        S + V   I N V + +
Sbjct: 304 TYVWCCQNQRNWVQIECCNDEGERY-------SREKVHEMIYNAVAKHI 345


>gi|145348882|ref|XP_001418872.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579102|gb|ABO97165.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 218

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 81/213 (38%), Gaps = 18/213 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDE 61
            G F+ FEG +  GK+T    L   L+ +  +  + R P   T   +     L S    E
Sbjct: 10  RGAFVLFEGADRCGKSTQAMRLVHTLEARGVEAELWRYPDRATAMGKMIDQYLRSKS--E 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++FAA R +  + ++   L  G  L+CDR+  S  A+   +     L L+  +
Sbjct: 68  MEDGAIHLLFAANRWE-KKALMERKLASGVTLVCDRYSYSGCAFTAAK-GVDGLDLEWCR 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V    PD  + L+L ++   KR             + +E     +    +  F  + 
Sbjct: 126 APEVGLPRPDALMYLELSLEDAAKR--------GGFGEERYE--TTEMQRAVKASFEAMR 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               D   ++D+      +   +L I    V+K
Sbjct: 176 E---DWWDVIDANREPDVIQDEVLRIALSAVEK 205


>gi|14601836|ref|NP_148377.1| thymidylate kinase [Aeropyrum pernix K1]
 gi|8134528|sp|Q9YA48|KTHY_AERPE RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|5105789|dbj|BAA81101.1| thymidylate kinase [Aeropyrum pernix K1]
          Length = 208

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 18/214 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             ++ EGI+G+G +TH  LL   L        + +EP   P     R  L S   +   +
Sbjct: 2   RIVALEGIDGSGVSTHSRLLHARLAGAGVKSCLWKEPTEGPVGRLIRGFLRS--TEGVDS 59

Query: 65  EAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  A++FAA RL  +   V+       ++L+ DR+  SS AYQG         L+ +  +
Sbjct: 60  DLMALLFAADRLWGLRLGVVERCGGSPEVLVVDRYKYSSLAYQGVGSG-----LEWVDAV 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +    +  + +D+P ++ L+R+  R         ++ ER    ++E+     L +AR 
Sbjct: 115 NRKAPEAEILVYIDVPTEVALRRITARERREVFETPEFLERVK-SMYEEV----LRLARA 169

Query: 184 QPDRCHIVDS-----AHSFQSVATNILNIVWELV 212
           +  +   V+          + V   I   V+E +
Sbjct: 170 RGVKVIRVEGVRGGVERGIEDVQGEIAERVFEAL 203


>gi|72392843|ref|XP_847222.1| thymidylate kinase [Trypanosoma brucei TREU927]
 gi|62358480|gb|AAX78942.1| thymidylate kinase, putative [Trypanosoma brucei]
 gi|70803252|gb|AAZ13156.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 345

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 31/226 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVDEFG 63
           I FEG +GAGK T    +++ L ++         P       +  R VL      + +  
Sbjct: 131 IVFEGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLSGERGALHDLD 190

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
            +  +++F+  R D +  + R  L  GK +L DR+  S++ +Q  +  +S +  F+  L+
Sbjct: 191 PKLFSLLFSLNRFDTLPEL-RYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHLE 249

Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177
           ++ ++ +    PD  + LDLP    L     R   RES  LD  E   +   E  RQ + 
Sbjct: 250 QLELEWLKLPPPDVALYLDLPPAAALV-AMQRDEKRES--LDIHETAGLSYKENVRQTYV 306

Query: 178 -----------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                      ++   ++ +R        S + V   I N V + +
Sbjct: 307 WCCQNQRNWVQIECCNDEGERY-------SREKVHEMIYNAVAKHI 345


>gi|75706618|gb|ABA25861.1| thymidylate kinase [Phytoplasma sp. CPh]
          Length = 209

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 20/214 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I+ L+  L+       + +  G +   +  R + L+    +   
Sbjct: 3   KLIVFEGLDGSGKTSLINYLQPQLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +  A        + +    + ++++ DR+L S+YAYQ    S +   L  L++I 
Sbjct: 58  LTRFYLSLANMAQIQAELFK----KNQLIILDRWLPSTYAYQLFPFSKEKQQLFPLKKIF 113

Query: 125 VQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     PD  I LD+   IG  R + + + +     D  ERK +   +  RQ +  
Sbjct: 114 KLNHETILNKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERKSLTYFQTVRQGYNH 169

Query: 180 IARNQPDRCH--IVDSAHSFQSVATNILNIVWEL 211
              +        I++ + S ++    I+  +  L
Sbjct: 170 YLTHYTSDIKKLILNGSDSIKTNVKQIIKQIGTL 203


>gi|38233300|ref|NP_939067.1| thymidylate kinase [Corynebacterium diphtheriae NCTC 13129]
 gi|38199559|emb|CAE49210.1| Putative thymidylate kinase [Corynebacterium diphtheriae]
          Length = 205

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 13/210 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I+ EGI+GAGK T +S +K        DV    R      A  A R +  S G     
Sbjct: 1   MIIAIEGIDGAGKNTLVSAIKERFDA---DVIGFPRYEQSIHAKLAQRALYGSMGDLTDS 57

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFLDSLQ 121
           A A A +FA  R D  + V+   +   K++L DR++ S+ AY   R  +     ++  L+
Sbjct: 58  AYAMATLFALDRYD-AKAVLGRYVGTSKVVLLDRYVASNAAYSAARTRNDAMVQWVQELE 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              +   +PD  I+L    ++  +R Q R +   S  LD +E +D  + E+  Q +  +A
Sbjct: 117 FEELGLPVPDIHILLHTSPELAAQRAQRREATDASRKLDRYE-EDAGLQERTFQAYESLA 175

Query: 182 RNQ---PDRCHIVDSAHSFQSVATNILNIV 208
           + +   P    +V    S  +V   I+  +
Sbjct: 176 QQKWMSP--WLLVHPDESPDTVTQRIIQAL 203


>gi|254570737|ref|XP_002492478.1| Thymidylate and uridylate kinase [Pichia pastoris GS115]
 gi|238032276|emb|CAY70299.1| Thymidylate and uridylate kinase [Pichia pastoris GS115]
 gi|328353509|emb|CCA39907.1| dTMP kinase [Pichia pastoris CBS 7435]
          Length = 202

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 75/210 (35%), Gaps = 27/210 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG++  GK+T  + L   L        + + P          +  L+   +    E
Sbjct: 5   LIVIEGLDRTGKSTQTAKLCHRLNG-----FLVKFPNRETPIGKLLNQYLTDASNPMPLE 59

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              ++F+A R + V+N I   L +G  ++ DR++ S  AY   +     L ++       
Sbjct: 60  VAHLLFSANRWEMVKN-IEDLLSKGTPVVMDRYVYSGVAYSMAKG----LDIEWCLAPDK 114

Query: 126 QEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               PD TI L   DL             S RE    + +E   +      R  F  +  
Sbjct: 115 GLPKPDVTIFLKANDLD----------SISQREGFGEERYEVASL--QTSVRNNFEILRS 162

Query: 183 NQPD-RCHIVDSAHSFQSVATNILNIVWEL 211
              + +  I+D       V  +I  +V  L
Sbjct: 163 RYDEWKVIIIDG-KDIDQVHEHIWELVCPL 191


>gi|330803239|ref|XP_003289616.1| thymidylate kinase [Dictyostelium purpureum]
 gi|325080317|gb|EGC33878.1| thymidylate kinase [Dictyostelium purpureum]
          Length = 192

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 40/219 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
             GLFI FEG +  GK+T +  L   +   +N      R P   TP  +     L +   
Sbjct: 3   KRGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYLQNS-- 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                 A  ++F++ R +  ++ I   L  G  ++ DR+  S  AY   +     + +D 
Sbjct: 61  TNMDDRALHLLFSSNRWE-AKDSILELLNSGTNIVVDRYSYSGVAYTAAKG----IDVDW 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     PD    L +  +   KR             + +E++              
Sbjct: 116 CYSCESGLPEPDIVFYLSMSTEDATKR--------GDYGGERYEKRPS------------ 155

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW---ELVQKR 215
                     ++++  + + V+  I  I     E +QK+
Sbjct: 156 --------WKVINANRTVEEVSNEINQIFDFEFESLQKK 186


>gi|256076848|ref|XP_002574721.1| thymidylate kinase [Schistosoma mansoni]
 gi|238659934|emb|CAZ30954.1| thymidylate kinase [Schistosoma mansoni]
          Length = 235

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 90/237 (37%), Gaps = 35/237 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           M+ G+F+  EG +  GKTT  SLL + L      +    + P   TP        L   G
Sbjct: 5   MSQGIFVVLEGADRVGKTTQASLLAKALSEITQRETLSVKFPDRDTPLGHHLDSYL--SG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           + +    A  ++F A R +     IR A+  G  ++ DR++ S  AY   +      + +
Sbjct: 63  IGDINKHALHLLFTANRWERQAE-IRKAISNGIPVVADRYIYSGIAYTAAKAPPTPNW-E 120

Query: 119 SLQEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
              E+    V PD  I L   +L             S R     + +E  +    ++  +
Sbjct: 121 WCWEMEKGLVEPDLVICLTPGNLDE----------LSSRNGYGKERYE--NDDFQKRVLE 168

Query: 176 IFLDIAR----NQPDR---------CHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218
            ++ I++    +  D           H + +   + + V   I+ +V   ++  + P
Sbjct: 169 NYVRISKDVELDNKDNDDETDSVGLWHFIQATDKTVEEVHKCIMVLVKSKLESIIGP 225


>gi|257440771|ref|ZP_05616526.1| dTMP kinase [Faecalibacterium prausnitzii A2-165]
 gi|257196745|gb|EEU95029.1| dTMP kinase [Faecalibacterium prausnitzii A2-165]
          Length = 222

 Score =  125 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 30/232 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57
           M+ G  I  EG++G+GK T   LL + L   ++ V     P     + A   + L+    
Sbjct: 1   MSKGKLIVLEGLDGSGKGTQAKLLAKHLTVTDHLVREITFPDYDSDSSALVKMYLAGQFG 60

Query: 58  -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115
              D+  A A +  +A  R    ++       EG IL+ DR+  S+  +Q  +   +   
Sbjct: 61  DKPDDVNAYAASSFYAVDRYAGYKSDWGKFYEEGGILIADRYTTSNAVHQCSKLPPEQWD 120

Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            FL  L +     +    PD  I L +   +  + +  RY   E+            +HE
Sbjct: 121 TFLQWLFDYEYHLLGLPAPDKVIYLQVDPAVSQRLMTARYHGDETKK---------DVHE 171

Query: 172 KRRQIFLDIARNQPDRCH------IVDSA-----HSFQSVATNILNIVWELV 212
           K  + +L  +R   + C        V         S + +   +  +   ++
Sbjct: 172 KDTE-YLARSRRAAEYCAAHLGWDTVHCTAGEKMRSIEDIQEEVRTLALAVI 222


>gi|253581348|ref|ZP_04858574.1| dTMP kinase [Fusobacterium varium ATCC 27725]
 gi|251836712|gb|EES65246.1| dTMP kinase [Fusobacterium varium ATCC 27725]
          Length = 232

 Score =  125 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 13/222 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T    L   L  + Y+V     P     A     + L+       
Sbjct: 11  GKLIVIEGTDSSGKETQTKKLFERLLNEKYNVKKISFPNYDSPACEPVKMYLAGKFGEDA 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---- 115
            +      ++++A  R    +        E  I++ DR++ S+  +Q  +   +      
Sbjct: 71  MKVNPYPVSMMYAIDRYASYKMDWEKFYQEDGIIVTDRYVTSNMVHQASKIIDETEKNVY 130

Query: 116 --FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             +LD L+   +    PD  I L++P ++ LK ++ R +            +D    EK 
Sbjct: 131 LNWLDELEYDKMDIPRPDLVIFLNMPTEMALKLMEERNNKITGEQRKDIHERDAAYLEKS 190

Query: 174 RQIFLDIARNQPDR-CHIVDSAH--SFQSVATNILNIVWELV 212
                +IA+    +     D     +   +   +  +V  ++
Sbjct: 191 HANACNIAKKYDWKEIKCTDGDRLKTIDEIGEEVYKLVRNII 232


>gi|156842253|ref|XP_001644495.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115139|gb|EDO16637.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 217

 Score =  125 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 84/226 (37%), Gaps = 29/226 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I  EG++  GK+T   +L   L        + + P          +  L+    
Sbjct: 1   MSRGRLILIEGLDRTGKSTQCDILCEKLNG-----TLMKFPQRETKIGQLINNYLTDKSF 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   ++  ++F+A R + +  +I+  L  G+ ++ DR++ S  AY   +     + +D  
Sbjct: 56  KMPDQSIHLLFSANRWE-MSEIIQTELNNGRDVILDRYVYSGIAYSSAKH-ISGMDIDWC 113

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR----RQI 176
            +     + PD T+ L            +    RE    + +E  ++   +       +I
Sbjct: 114 YQCDKGLIRPDITVFLTND---------SNNDDREGFGEERYE--NIEFQKVVKLKFYEI 162

Query: 177 FLDI------ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKR 215
           F  +           +   I++ +  +   V   IL  +   + K+
Sbjct: 163 FKKLDNLKEGEEAGENGLQIINVTNKNIDEVTGLILERIQPFLNKK 208


>gi|229365992|gb|ACQ57976.1| Thymidylate kinase [Anoplopoma fimbria]
          Length = 183

 Score =  125 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 15/190 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGKTT    L + LQ+      + R P  T          L    D 
Sbjct: 4   KRGALIVLEGVDKAGKTTQCKKLVQALQQSGRPAEMMRFPDRTTTIGQLISAYLEKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R + V   +R  L +G  L+ DR+  S  A+   +       LD   
Sbjct: 63  LEDHTVHLLFSANRWELVPQ-MRKKLEQGITLVVDRYAFSGVAFTSAKQG---FCLDWCM 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  I L L             +LR     + +     +     +Q F  + 
Sbjct: 119 KPDVGLPKPDLVIFLQLSPAEA--------TLRGQFGEERY--GTSVFQRAVQQRFEQLM 168

Query: 182 RNQPDRCHIV 191
           +       ++
Sbjct: 169 KEPSVNWQVI 178


>gi|19074200|ref|NP_584806.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1]
 gi|19068842|emb|CAD25310.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1]
          Length = 191

 Score =  125 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 19/208 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G F+ FEG++ +GKTT +  L   L        +       P  +     L      
Sbjct: 1   MSKGKFVVFEGLDRSGKTTIVGSLYESLLPIVPTSKIRFPNRSGPVGKIIDGYL--QKKT 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              +E   ++F+A R +H   ++   L    I+LCDR+  S  AY   +     L LD  
Sbjct: 59  NLESETIHLLFSADRYEH--RLMIEELRRDTIILCDRYSMSGIAYSVAKG----LSLDWC 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                    PD TI +D+P+D   +R      + ++          V   +K    +  +
Sbjct: 113 IASEALLPKPDLTIFIDVPMDEICRRKGFGTEIHDT----------VPFLKKVLSAYQAL 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + + +   +VD     + V   +   +
Sbjct: 163 LKKE-ENTLVVDGTLPVREVVEIVRKRI 189


>gi|48478173|ref|YP_023879.1| thymidylate kinase [Picrophilus torridus DSM 9790]
 gi|73920826|sp|Q6L016|KTHY_PICTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|48430821|gb|AAT43686.1| putative thymidylate kinase [Picrophilus torridus DSM 9790]
          Length = 202

 Score =  125 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 28/219 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N  +FI+ EGI+G+GKTT    +  +        ++TREP      +           ++
Sbjct: 4   NGSMFIAIEGIDGSGKTTLAGDIASY-----TGFYLTREPTDRFCYDYI-----EADYND 53

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118
             +     +F   R  H +  I+  L+ G  ++ DR++ SS AYQG     +   +D   
Sbjct: 54  ESSIINFFLFTLDRYMHQKE-IKNHLING--VISDRYVFSSIAYQGSGMEKRFKNMDETI 110

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             + ++S   +MPD  I L +   I LKR+  R +  E    D FER  + + +   + +
Sbjct: 111 SWMLDVSRFIIMPDLIIYLKIDPGIALKRLNLRKN--EKKNTDAFER--LEMLKNVSKYY 166

Query: 178 LDIARNQPDRCHI----VDSAHSFQSVATNILNIVWELV 212
             I         I    +++   +  V    +  + + +
Sbjct: 167 DYI---FSGIIKIPVIKINAEMEYNYVKDEAIKGLNDYL 202


>gi|148264685|ref|YP_001231391.1| thymidylate kinase [Geobacter uraniireducens Rf4]
 gi|146398185|gb|ABQ26818.1| thymidylate kinase [Geobacter uraniireducens Rf4]
          Length = 226

 Score =  125 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 24/221 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I  EG +G+G++T ++LLK +L+ +    H T + G   +   +  +  +   +  
Sbjct: 17  AGKLIVIEGADGSGRSTQMALLKDYLEGRG---HATVDVGLRRSTLVSEELQEAKQGNVL 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G    ++ +A    D +EN I PAL  G I+L DR++ +  A    RD  +    D ++ 
Sbjct: 74  GEITRSLFYATDFADQLENRIIPALRAGFIVLADRYIYTLMA----RDIVRGADRDWVRS 129

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----------KDVMIHE 171
           +    ++PD  I L +     ++R     + R++A LDY+E               + ++
Sbjct: 130 LYGLALVPDLVIYLRVSPSQLVER-----NFRKNATLDYWEAGMDLGLSRDIFDSFIRYQ 184

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  Q    + + +    + V+   S  SVA  I   V  L+
Sbjct: 185 RLIQKEFTLMQQEYG-FNAVNGNRSICSVAGEITARVEGLM 224


>gi|37206|emb|CAA38528.1| thymidylate kinase [Homo sapiens]
          Length = 211

 Score =  125 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 87/223 (39%), Gaps = 20/223 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L  +     + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEAL-SRGPPPELLRFPERSTEIGKLLSSYLQKKSD- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 62  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E  +    E+  + F  + 
Sbjct: 118 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 167

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++   ++V   +     + +    +K +  L 
Sbjct: 168 KDTTLNWKMVDASKRLEAVHEELRVLSEDAIRTATEKPLGELW 210


>gi|45198887|ref|NP_985916.1| AFR369Wp [Ashbya gossypii ATCC 10895]
 gi|44984916|gb|AAS53740.1| AFR369Wp [Ashbya gossypii ATCC 10895]
          Length = 213

 Score =  125 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 82/225 (36%), Gaps = 21/225 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GK+T + +L   LQ     V + R P       A     L     
Sbjct: 1   MTRGRLILIEGLDRVGKSTQVGVLAERLQ---PHVQLMRFPARDTPVGALLDRYLRDRDF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   +   ++FAA R +     I  AL  G+ ++ DR++ S  AY   + +   + L+  
Sbjct: 58  ELADQTAHLLFAANRWE-CAARIEAALAAGQHVILDRYVYSGAAYSAAK-AVPRMDLEWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                    PD T+ L         +     + R     + +E+      E+ R  F  +
Sbjct: 116 AAADRGLPKPDLTLFL--------TQGAAAAAQRAGYGAERYEQ--PDFQERVRAQFERV 165

Query: 181 ARNQP-----DRCHIVD-SAHSFQSVATNILNIVWELVQKRVSPL 219
              +      +    VD +  S  +VA  I   V + + +    L
Sbjct: 166 LAAEDAAYRAEHLVFVDVAGKSVAAVAGEIWAAVQQHLARDAGAL 210


>gi|156544086|ref|XP_001605460.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate kinase)
           [Nasonia vitripennis]
          Length = 209

 Score =  125 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 17/213 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI  EG++ AGK+T +S++   L+ +N  V     P  + A     +  L+  ++
Sbjct: 1   MARGAFIVLEGLDRAGKSTQVSMIVEALKERNVPVERRVFPDRSTAIGGIINDYLAKKIE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EA  ++F+A R +  ++ I   L +G  L+ DR+  S         ++    L   
Sbjct: 61  -LAPEAVHLLFSANRWE-CKDGILETLEKGTTLIVDRYAASGA---AYSAATTGRPLSWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                    PD  + LD+  D            R +   + FER       K  + F  +
Sbjct: 116 TSPDQGLPAPDLVLYLDVTPDT--------QQQRSNWGEERFER--AETQRKVAENFRKL 165

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +  +      V++      V   +L  V +L++
Sbjct: 166 S--ESGNWAFVEAGLDKLEVHQKLLQKVLDLLE 196


>gi|292670427|ref|ZP_06603853.1| thymidylate kinase [Selenomonas noxia ATCC 43541]
 gi|292647837|gb|EFF65809.1| thymidylate kinase [Selenomonas noxia ATCC 43541]
          Length = 225

 Score =  125 bits (314), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 19/217 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           M  G     E  +G+GK T   +L   L R+   V     P     +     + L     
Sbjct: 3   MAKGKLFIIEAGDGSGKETQTRMLAERLVREGRRVVPVAFPDYEADSSMLVRMYLRGDFG 62

Query: 59  --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113
              D+  A A +  FA  R             +G ++L DR+  S+  +Q  +      +
Sbjct: 63  THADDVNAYAASTFFAVDRYASYRMKWGKDYEDGAVILADRYTTSNMVHQAVKIGDAAER 122

Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L ++    +   +PD    LD+        +    +  + A  D  ER D    
Sbjct: 123 DAYLDWLYDLEFRKMGLPVPDAVFFLDMEP-CAADHLIAMRAKEKGAAPDIHER-DAAYL 180

Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVAT 202
           E+    ++ +A         +    D A    +++  
Sbjct: 181 ERAHAAYVLLAERYG--WVRIPSSTDGAPLPIEAIHE 215


>gi|325990109|ref|YP_004249808.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis KI3806]
 gi|323575194|emb|CBZ40859.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis]
          Length = 218

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 30/226 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC- 57
           +FI  EG++ +GKTT I+ LK+ L        K   +H T EP G    +     L S  
Sbjct: 1   MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYGPEEFKEKFSELSSPI 60

Query: 58  --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                      E+++F A R +H+   I+P L E  +L+CDR+  S+ AYQ         
Sbjct: 61  FSNSYSLSPVTESLLFLAIRAEHLRKFIKPKLEENSLLICDRYFLSTLAYQSHLKGVSCE 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +L S  +   +   P+   I+++  +       N+   ++   LD               
Sbjct: 121 WLSSNMKFISEGFSPNLVFIVNVSEEDWKTFTNNKRIKKQLNKLDCLSSS---------- 170

Query: 176 IFLDIARNQP----------DRCHIVDSAHSFQSVATNILNIVWEL 211
            + +++              +    + S  S +  A  I+N + E+
Sbjct: 171 -YRELSEAYKWASEKLIELGENVINIPSTFSLEEKAQFIINKIVEI 215


>gi|253988332|ref|YP_003039688.1| thymidylate kinase-like protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779782|emb|CAQ82943.1| similarities with thymidylate kinase [Photorhabdus asymbiotica]
          Length = 223

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 21/228 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-----PGG--TPAAEAARHV 53
           +  GLFI+FEG +GAGK+T    +   L     ++    +     P G         R V
Sbjct: 2   IKRGLFIAFEGNDGAGKSTISREVYDILSLDYNNIVFLDKNYPLLPSGYSMYHMGKIRDV 61

Query: 54  LLSCGVD----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           L    +     E G     ++ A+        +I+P+L++GKI++CD +     A    +
Sbjct: 62  LWDYDISAPLGELGDRHWILLIASWFAVLDSLIIQPSLLQGKIIICDSWYYKYLARFLLK 121

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD-VM 168
            +      +S+  I+     PD  I LD+P DI  KR +      ES  L+  E+ D + 
Sbjct: 122 STELAELSNSVLSINT---KPDMVIYLDVPPDIAEKR-KKMLKPSESGKLEKNEKYDFIE 177

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVW-ELVQK 214
             +     +        D   I+D+   +  +V    ++I+  E+++K
Sbjct: 178 YQKHVLNQYQTF---YDDTWKIIDTDTLTKDAVIKLTVDIIQGEILRK 222


>gi|303389072|ref|XP_003072769.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301911|gb|ADM11409.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506]
          Length = 191

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 19/210 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G FI FEG++ +GKTT +  L   L     DV   R P  +          L   ++
Sbjct: 1   MTQGKFIVFEGLDRSGKTTIVDSLYDSLSSMG-DVRKMRFPNRSGNIGKVIDAYLRKEIN 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E   ++F+  R +    +    L +  ILLCDR+  S  +Y   +     L LD  
Sbjct: 60  -LENETIHLLFSGDRYEQKSTIEE--LRKSSILLCDRYSLSGASYSVAKG----LDLDWC 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +      PD TI +D+P+D       +R     +   D+     +   EK    +  +
Sbjct: 113 VMVDSGLPKPDMTIFIDIPLDE-----ISRRKGFGNEVHDH-----LPFLEKVLSAYKVL 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            + + +   IVD      S+   +   + E
Sbjct: 163 LKREKN-VLIVDGTFPISSIVEIVKRKILE 191


>gi|39998390|ref|NP_954341.1| hypothetical protein GSU3301 [Geobacter sulfurreducens PCA]
 gi|39985336|gb|AAR36691.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298507331|gb|ADI86054.1| thymidylate kinase, putative [Geobacter sulfurreducens KN400]
          Length = 211

 Score =  124 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 29/226 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G  I  EGI G+G+   +      L   L    YDV     P    A E     LL+
Sbjct: 1   MRKGKLIVIEGISGSGQ--QVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLN 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                    A+ +  +A R +  +NV+ PAL + KI+LC +   SS A       ++H  
Sbjct: 59  WPFGR-TPRADFLFESAVRTEVFKNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFD 117

Query: 117 ----LDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
               +D +    +   E+ PD TI +D+P     +R+++   +     +DY        +
Sbjct: 118 VLRHIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQIHHEGGIDY--------Y 169

Query: 171 EKRRQIFLDIARNQPDRC--HIVDSAHS--FQSVATNILNIVWELV 212
            + R+ +L     +  R     +D++     + +   I ++V +++
Sbjct: 170 NQMREFYLK----EISRWRGVRIDASAGRHPEIINAEIWDVVKKIL 211


>gi|156088733|ref|XP_001611773.1| thymidylate kinase [Babesia bovis T2Bo]
 gi|154799027|gb|EDO08205.1| thymidylate kinase, putative [Babesia bovis]
          Length = 237

 Score =  124 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 86/205 (41%), Gaps = 16/205 (7%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           FEGI+ +GK+T + LL + L  K  D  + + P             L+            
Sbjct: 18  FEGIDRSGKSTQVKLLSQKLTDKGIDHKLLKFPCYETECGKMLATHLASHGAVRSRRCIH 77

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           ++F+A R + ++ ++   L+ G  ++ DR+  S  AY    ++  + +  +  +     +
Sbjct: 78  LLFSANRWEMMKEIV-ATLVSGTHIIVDRYAFSGVAYSVGAENLSYEWCITADD---GLL 133

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD  + LD P  +   R         +   + +E++  +  E  R+++ + + + P   
Sbjct: 134 SPDLVVYLDNPAAVSAAR--------SNFGDERYEQEGKL--EAVRRVYEEFS-SLP-YW 181

Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213
           H  D+    + ++  I   V  ++Q
Sbjct: 182 HKYDATLPQEVLSKAIYERVASVLQ 206


>gi|210623262|ref|ZP_03293679.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275]
 gi|210153663|gb|EEA84669.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275]
          Length = 227

 Score =  124 bits (312), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 80/227 (35%), Gaps = 18/227 (7%)

Query: 1   MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG- 58
           MN G  I  E G + +GK T    L + L    Y+V     P     +     + L    
Sbjct: 4   MN-GKLIIIESGSDASGKATQSEELLKKLTADGYNVRKVEYPNYKSESSTLVKMYLRGDF 62

Query: 59  ---VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113
               D+  A   +  F A R    +         G I++ DR+  S+  +Q  +     +
Sbjct: 63  GKHADDVDAYIASTFFTADRYASFKTEWEEFYRSGGIVIADRYTTSNMVHQASKMEIEER 122

Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +LD L++          PD  I L++PVD  +K ++NR +             D    
Sbjct: 123 DKYLDWLEDYEYNLFKIPRPDEVIFLNVPVDYSIKLMENRKNKFTGEEEKDIHESDKNYL 182

Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
            K     L IA         V+        + + ++  I  IV  ++
Sbjct: 183 RKTYNNSLYIADKY--NWKRVECVENEQLRTIEDISNEIYEIVKNIL 227


>gi|325973666|ref|YP_004250730.1| thymidylate kinase [Mycoplasma suis str. Illinois]
 gi|323652268|gb|ADX98350.1| thymidylate kinase [Mycoplasma suis str. Illinois]
          Length = 218

 Score =  124 bits (312), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 30/226 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC- 57
           +FI  EG++ +GKTT I+ LK+ L        K   +H T EP G    +     L S  
Sbjct: 1   MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYGPEEFKEKFSELSSPI 60

Query: 58  --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                      E+++F A R +H++  I+P L E  +L+CDR+  S+ AYQ         
Sbjct: 61  FSNSYSLSPVTESLLFLAIRAEHLKTFIKPKLEENSLLICDRYFLSTLAYQSYLKGVSCE 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +L S  +   +   P+   I+++  +       N+   ++   LD               
Sbjct: 121 WLSSNMKFISEGFSPNLVFIVNVSEEDWKTFTNNKRIKKQLNKLDCLSSS---------- 170

Query: 176 IFLDIARNQP----------DRCHIVDSAHSFQSVATNILNIVWEL 211
            + +++              +    + S  S +     I+N + E+
Sbjct: 171 -YRELSEAYKWASEKLIELGENVINIPSTFSLEEKVQFIINKIVEI 215


>gi|290558930|gb|EFD92317.1| thymidylate kinase [Candidatus Parvarchaeum acidophilus ARMAN-5]
          Length = 202

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 77/207 (37%), Gaps = 10/207 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EGI+GAGK T   LLK  L+     V     P  +    A     L   + +  
Sbjct: 3   GKIIVIEGIDGAGKATQSKLLKEKLESNGITVSSYSYPDYSSVYGARIKSFLYKEI-KIK 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   +++    +   E +I   L  G  ++ DRF  S+ AYQ             ++  
Sbjct: 62  VDELFMLYLIDMVKDREKMINE-LKSGNYIIIDRFFFSTIAYQSAGGFDYDNCKKIIKLF 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                +P+ T  +D+PVD+ + R + +   +    +D FE   V   +     +  +   
Sbjct: 121 --DMPVPEITFFIDVPVDVSMSRKEKQ---KGKLDVDKFESNKV-FLQNVSLYYKKLMEE 174

Query: 184 --QPDRCHIVDSAHSFQSVATNILNIV 208
                +   +D     + +   I+  +
Sbjct: 175 NFYSKKWKRIDGNLKIEEINDLIIKSI 201


>gi|289676128|ref|ZP_06497018.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5]
          Length = 225

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 11/198 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCG---V 59
           G  I  EGI+G+GK T    + +       +      P  G           L+     +
Sbjct: 2   GKIIVVEGIDGSGKNTQTDKMLKAFLSSGVEASKISFPQYGKTFFAKEVASYLNGEFGSI 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114
           ++   +  A+++A  R +  E ++  +     +L+CDR++ S+ A+Q  +      +   
Sbjct: 62  EQISPKLSAMLYAGDRFECKEEIVNKS-TRDSVLICDRYVYSNVAHQIAKVSDEDRNELR 120

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            ++++L+    +   PD TI LD+P  +    +  + +   +        +D     K  
Sbjct: 121 EWIEALEFDVYKLPRPDLTIFLDVPPKVSSDLIFRKDARNYTDKKKDLHEEDDSYLLKVY 180

Query: 175 QIFLDIARNQPDRCHIVD 192
           +IF D+A  + D    ++
Sbjct: 181 KIFKDMAVREND-WVAIN 197


>gi|225020669|ref|ZP_03709861.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680065|ref|ZP_07402875.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266]
 gi|224946615|gb|EEG27824.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660685|gb|EFM50182.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266]
          Length = 208

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 9/213 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   + I+ EGI+GAGKTT ++ L+  L  +       R      A    R +    G  
Sbjct: 1   MIENMIIAIEGIDGAGKTTLLATLREQLHAEVIA--FPRYETSIHAQLVRRALYQQMGDL 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A A +FA  R +    ++ P +    +++ DR++ S+ AY     +     +D +
Sbjct: 59  TDSVYAMATLFALDRHE-ARELLHPFVASNALVVLDRYVASNAAYSWA-RTGDETIIDWV 116

Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            E+   ++    PD  + L+   D+  +R  NR  L      D +E  D  + ++    +
Sbjct: 117 AELEFNTLGVPRPDLQVFLNTTPDVAGQRAINREKLDRDRARDSYES-DRALQQRTADAY 175

Query: 178 LDIARNQPDR-CHIVDSAHSFQSVATNILNIVW 209
             +          +V+    +  VA  I   + 
Sbjct: 176 GQLVAQNWQSPWLVVEPEADYLHVADRITAALQ 208


>gi|257076424|ref|ZP_05570785.1| thymidylate kinase [Ferroplasma acidarmanus fer1]
          Length = 206

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 26/221 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EGI+G+GKTT ++ L++       ++H TREP         + +        F +
Sbjct: 1   MFITIEGIDGSGKTTLVNSLRKIFD----NIHFTREPTDKFQLANLKTL-----STPFNS 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERD----SSQHLFLDS 119
                +F   RL+H + +       G K ++CDR+L SS AY+G         +   +  
Sbjct: 52  FYNFFLFTYDRLEHQDEI------NGFKNVICDRYLASSIAYEGPMIEELFGDKKETVLW 105

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQN-RYSLR-ESACLDYF-ERKDVMIHEKRRQI 176
           + E+S    +PD  I LD  +D+ L+R++N R +L      L    E++ +   +   + 
Sbjct: 106 MLEVSKMLKLPDMIIYLDAHLDVALERIRNSRKNLNFRGKQLSILEEKEGLKAIQDYYEY 165

Query: 177 FL---DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           FL   ++   +  +   +++    + V     NI+ + ++K
Sbjct: 166 FLGNIEMFTKKQIKIERINANSPMEDVLYKAKNIINKTIEK 206


>gi|261885334|ref|ZP_06009373.1| thymidylate kinase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 193

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++FEG++G GK+T ISLLK F      D  +T+EPGGT      R  LL     +   
Sbjct: 1   MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123
           + E  +F A R +H E V++P      ++L DR   S  AY    D S     L  L + 
Sbjct: 56  KTEIFLFLADRAEHYEKVLKPNYAN--LVLNDRSFVSGMAYAMANDSSLDIGLLLDLNKF 113

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++   + D  + L     +   R+ +R +  E       E + +    +  Q F+ I 
Sbjct: 114 ALNGDLGDKFVFLKADEILLRNRLFSRGTSDE------IEMRGIEYLMRV-QGFMSII 164


>gi|257126449|ref|YP_003164563.1| thymidylate kinase [Leptotrichia buccalis C-1013-b]
 gi|257050388|gb|ACV39572.1| thymidylate kinase [Leptotrichia buccalis C-1013-b]
          Length = 225

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 19/181 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCG--- 58
           G  I  EG +G+GK T   LL + L+  K  + V     P     A     + L+     
Sbjct: 2   GKLIIIEGTDGSGKQTQTELLYKKLKEIKGEEKVKKISFPNYESRASEPVKMYLAGEFGK 61

Query: 59  -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115
             +   A A +++++  R    +         G I++ DR+  S+  +Q  +   +    
Sbjct: 62  TAESVNAYAASVLYSIDRFASFKTEWEEFYNNGGIVISDRYTISNMIHQVPKILDEKEKE 121

Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +L+ L ++    +    PD    LD+P +   K ++NR +            K   IHE
Sbjct: 122 KYLEWLVDLEWGKIGIPKPDIVFFLDIPFEFSQKLMKNRENKITGG-------KKKDIHE 174

Query: 172 K 172
           K
Sbjct: 175 K 175


>gi|170032238|ref|XP_001843989.1| thymidylate kinase [Culex quinquefasciatus]
 gi|167872105|gb|EDS35488.1| thymidylate kinase [Culex quinquefasciatus]
          Length = 210

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 18/207 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG + AGKTT    +   L +          P  +       +  L+   D 
Sbjct: 6   KRGALIVLEGCDRAGKTTQCKRIVEHLTQSGRKAKFMNFPDRSTDCGKLINSYLTNK-DN 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F  E   ++F   R +     +   L +G  L+ DR+  S  A+   +     L ++  +
Sbjct: 65  FTDEGIHLLFTLNRWE-ARKQMEQLLQDGTTLIVDRYSYSGVAFSSAKG----LDMEWCK 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD  I+L L  +   KR             + +E        +    F ++ 
Sbjct: 120 APEAGLLKPDLVILLTLTAEALAKR--------GGFGEERYE--VPEFQRRVMGKFAEL- 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
                    +D+      +   +  +V
Sbjct: 169 -RDDTYWRQIDADKGQDELTVELSELV 194


>gi|326469002|gb|EGD93011.1| thymidylate kinase [Trichophyton tonsurans CBS 112818]
          Length = 182

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 13/179 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +  EG++ AGK+T  + L +FL  + ++    R P  T A     +  L  G  +
Sbjct: 11  RRGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYL-RGEIQ 69

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ +   LD   
Sbjct: 70  LDDHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              V    PD    L++  ++   R             + +E   V + +K  ++FL +
Sbjct: 128 RPEVGLPRPDIWFFLNISTEVAAAR--------GGYGTERYE--TVNLQKKVGKLFLSL 176


>gi|157817466|ref|NP_001100395.1| thymidylate kinase [Rattus norvegicus]
 gi|149037469|gb|EDL91900.1| deoxythymidylate kinase (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 212

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGKTT    L   L    +   + R P  +          L    + 
Sbjct: 4   RRGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTE- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+   +   ++  LD  +
Sbjct: 63  LEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTSAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD        + + L+      + R    L+ +E       E+    F  + 
Sbjct: 119 QPDVGLPKPD--------LILFLQLQLLDAASRGEFGLERYE--TGTFQEQVLLCFQQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             +     +VD++ S + V   I  +  + +Q
Sbjct: 169 SEKNLNWKVVDASKSIEDVHEEIRALSEDAIQ 200


>gi|51599045|ref|YP_073233.1| thymidylate kinase [Borrelia garinii PBi]
 gi|51573616|gb|AAU07641.1| thymidylate kinase [Borrelia garinii PBi]
          Length = 202

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 20/211 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      +  +  L++         
Sbjct: 8   FYCIEGIDGSGKTSISNKLKTLCNDESR-YYFTKEPSNGIIGKMIKEQLMNFKN-PLKES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L    K ++ DR+L SS AYQG              E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    +    +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIKTDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               + +++   +S +         ++ L++
Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLIK 201


>gi|257470873|ref|ZP_05634963.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|317065075|ref|ZP_07929560.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|313690751|gb|EFS27586.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185]
          Length = 223

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 13/222 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T    L   L  + Y+V     P     A     + L+       
Sbjct: 2   GKLIVIEGTDSSGKETQTKKLFERLLAEKYNVKKISFPNYDSPACEPVKMYLAGKFGEDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116
            +      ++++A  R    +        E  I++ DR++ S+  +Q  + +++     +
Sbjct: 62  MKVNPYPVSMMYAIDRYASYKMDWEKFYKEEGIIVTDRYVTSNMVHQASKIATEDEKSVY 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           LD L E+    +    PD  I L++P ++ LK ++ R +            +D    EK 
Sbjct: 122 LDWLDELEYDKMDIPRPDLIIFLNMPTEMALKLMEERNNKITGEQKKDIHERDAAYLEKS 181

Query: 174 RQIFLDIARNQPDR-CHIVDSAH--SFQSVATNILNIVWELV 212
                 IA     +     D     +   +   +  +V  ++
Sbjct: 182 HANACSIAEKYGWKEIKCTDGDRLKTIDEIGEEVYKLVRNII 223


>gi|225711618|gb|ACO11655.1| Thymidylate kinase [Caligus rogercresseyi]
          Length = 216

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 21/177 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G FI  EG + +GKTT    L        ++    R P   +P   +  +  L+ G  
Sbjct: 7   KRGAFIVLEGCDRSGKTTIAKRLSD---SPGFE--FFRFPDRDSPLTGSLINSFLTGGT- 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              ++   ++F+A R + V +++   L  GK ++CDR+  S  AY   +        D  
Sbjct: 61  PMSSQLIHLLFSANRWEKVPSMLSV-LSAGKNIICDRYAYSGIAYSSSKPGMDF---DWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                    PD  I LD+  +  LKR             + +E+       K R I+
Sbjct: 117 AGPDNGLPTPDLVIFLDVSPEQALKR--------GGFGEEVYEKVG--FQAKVRDIY 163


>gi|157785665|ref|NP_001099137.1| thymidylate kinase isoform 1 [Mus musculus]
 gi|193806346|sp|P97930|KTHY_MOUSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|20987342|gb|AAH30178.1| Dtymk protein [Mus musculus]
 gi|148707983|gb|EDL39930.1| deoxythymidylate kinase, isoform CRA_a [Mus musculus]
          Length = 212

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGKTT    L   L    +   + R P  +       +  L    + 
Sbjct: 4   RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTE- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  LEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD        + + L+      + R    L+ +E       ++    F  + 
Sbjct: 119 QPDVGLPKPD--------LILFLQLQLLDAAARGEFGLERYE--TGTFQKQVLLCFQQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             +     +VD++ S + V   I     + ++
Sbjct: 169 EEKNLNWKVVDASKSIEEVHKEIRAHSEDAIR 200


>gi|226305654|ref|YP_002765614.1| thymidylate kinase [Rhodococcus erythropolis PR4]
 gi|226184771|dbj|BAH32875.1| putative thymidylate kinase [Rhodococcus erythropolis PR4]
          Length = 213

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL-SCGVD 60
           G  ++ EG++GAGK T I  ++  L+R    +     P  G +  A+ A   L  S G  
Sbjct: 2   GTLVALEGLDGAGKRTLIGKVETELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R    +  I   L    I+L DR++ S+ AY   R         + 
Sbjct: 62  AESVNAMAVLFALDRAGAADR-ISELLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120

Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++E+ +  +    PD  + LD+PV +  +R ++R +   S  LD +ER D  +  +  +
Sbjct: 121 WIRELELGRLALPAPDLQLYLDVPVALAEQRARSREAQDASRQLDAYER-DGGLQARTGE 179

Query: 176 IFLDIARNQ 184
           ++  +A   
Sbjct: 180 LYKQLAATN 188


>gi|33563101|dbj|BAA31455.1| Thimidylate Kinase [Phytoplasma sp.]
          Length = 209

 Score =  122 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 20/211 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I  L+  L+       + +  G +   +  R + L+    +   
Sbjct: 3   KLIVFEGLDGSGKTSLIHTLQPQLKT---PHQLYQGLGSSSIGKEIRDLFLN--FQQVDY 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLDSLQ 121
                +  A        + +      ++++ DR+L S+YAYQ     ++  Q   L  + 
Sbjct: 58  LTRFYLSLANMAQIQAELFK----NNQLIILDRWLPSAYAYQLFPFSKEKKQLPPLKKIF 113

Query: 122 EISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +++ + +   PD  I LD+   IG  R + + + +     D  ER+ +   +  RQ +  
Sbjct: 114 KLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERQSLTYFQTVRQGYNH 169

Query: 180 IARNQPDRC--HIVDSAHSFQSVATNILNIV 208
              +        I++ + S +S    I+  +
Sbjct: 170 YLTHYTSGVNKLILNGSDSIKSNVKQIIKQI 200


>gi|255624824|ref|XP_002540531.1| Thymidylate kinase, putative [Ricinus communis]
 gi|223495133|gb|EEF21852.1| Thymidylate kinase, putative [Ricinus communis]
          Length = 127

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/114 (40%), Positives = 73/114 (64%), Gaps = 2/114 (1%)

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           +DSS  YQG   + +  F+++LQ ++V  V+PDCT+ILD+P +IGL+  + R     +A 
Sbjct: 1   MDSSRVYQGVTGNLEPDFIEALQRVAVNGVVPDCTLILDIPAEIGLE--RARRRASAAAA 58

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            D FE++++  HEKRR+ FLDIA   P RCH++D+     ++A  I  I+ E +
Sbjct: 59  PDRFEKEEMQTHEKRREAFLDIAARDPGRCHVIDAQRPEDAIADEIAGIIEERL 112


>gi|197294494|ref|YP_001799035.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
 gi|171853821|emb|CAM11765.1| Thymidylate kinase [Candidatus Phytoplasma australiense]
          Length = 195

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 14/188 (7%)

Query: 33  YDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92
                 +  G +   +  R++ L     +   + + ++  A  L   + +I PAL+ G +
Sbjct: 6   IKSKFFQGLGSSIVGKEIRNLFLHQS--KISPKTKYLLSLANMLQTQDELIFPALLSGYL 63

Query: 93  LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           +L DR+  S++AYQ + +   +    + + I+   + P  T  LD+   IG++R QN+ +
Sbjct: 64  VLVDRWYGSTFAYQSKGNYIDYDDKITSKIINHFLIKPKLTFYLDIDPKIGIQRKQNQTN 123

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDI------ARNQPDRC--HIVDSAHSFQSVATNI 204
            +    LD  ERK +   E  R+ +L+       A      C   ++++  S +      
Sbjct: 124 HK----LDLIERKPLNYFENVRKHYLNQHKYCNDANCNHKNCNHFLINATKSQKDNLEQT 179

Query: 205 LNIVWELV 212
             I+ + +
Sbjct: 180 TQILIKKI 187


>gi|330839887|ref|YP_004414467.1| Thymidylate kinase [Selenomonas sputigena ATCC 35185]
 gi|329747651|gb|AEC01008.1| Thymidylate kinase [Selenomonas sputigena ATCC 35185]
          Length = 224

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
            G  +  E  +G+GK T   +L+  L  +   V     P     + A   + L       
Sbjct: 4   KGKLLVLEAGDGSGKATQTKMLRERLVAEGRCVRQVEFPDYASPSSALVRMYLGGDFGER 63

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
             E  A A +  FA  R    +   R  L  G I+L DR+  ++  +Q  +    + +  
Sbjct: 64  ASEVNAYAASAFFAVDRYASFQTKWRADLEAGAIVLADRYTTANMVHQAVKLEEAAEREA 123

Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FL  L++    ++    PD  + LD+   +  + +    +    A  D  ER D     +
Sbjct: 124 FLAWLEDFEYGKLALPRPDLVLFLDMDPAVSRR-LIAARAAASGAARDIHER-DEGYLVR 181

Query: 173 RRQIFLDIARNQP-DRCHIVDSAHSF--QSVATNILNIVWELV 212
             +  +++A      R    ++      ++V   I   V  ++
Sbjct: 182 CHRASVNLAARCGWQRVRCSEAGEPLSREAVHEKIYEAVRRIL 224


>gi|950071|emb|CAA83746.1| ATP-bind. pyrimidine kinase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 98

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/99 (41%), Positives = 63/99 (63%), Gaps = 4/99 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+FEG++G+GKTT +  +K  L+R NY V +TREPGG   AE  R ++L     +  A
Sbjct: 1   MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
             EA++F A+R  H++ VI+PAL +   ++C  +  S Y
Sbjct: 61  WTEALLFIASRNQHLQKVIKPALEKN--IIC--YFRSLY 95


>gi|229489508|ref|ZP_04383371.1| thymidylate kinase [Rhodococcus erythropolis SK121]
 gi|229323605|gb|EEN89363.1| thymidylate kinase [Rhodococcus erythropolis SK121]
          Length = 213

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL-SCGVD 60
           G  ++ EG++GAGK T I  ++  L+R    +     P  G +  A+ A   L  S G  
Sbjct: 2   GTLVALEGLDGAGKRTLIGKVESELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R    +  I   L    I+L DR++ S+ AY   R         + 
Sbjct: 62  AESVNAMAVLFALDRAGAADR-ISDLLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120

Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++E+ +  +    PD  + LD+PV +  +R ++R +   S  LD +ER D  +  +  +
Sbjct: 121 WVRELELGRLALPAPDLQLYLDVPVALAEQRARSREAEDASRQLDAYER-DGGLQARTGE 179

Query: 176 IFLDIARNQ 184
           ++  +A   
Sbjct: 180 LYKQLAATD 188


>gi|260888711|ref|ZP_05899974.1| dTMP kinase [Selenomonas sputigena ATCC 35185]
 gi|260861580|gb|EEX76080.1| dTMP kinase [Selenomonas sputigena ATCC 35185]
          Length = 230

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
            G  +  E  +G+GK T   +L+  L  +   V     P     + A   + L       
Sbjct: 10  KGKLLVLEAGDGSGKATQTKMLRERLVAEGRCVRQVEFPDYASPSSALVRMYLGGDFGER 69

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
             E  A A +  FA  R    +   R  L  G I+L DR+  ++  +Q  +    + +  
Sbjct: 70  ASEVNAYAASAFFAVDRYASFQTKWRADLEAGAIVLADRYTTANMVHQAVKLEEAAEREA 129

Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FL  L++    ++    PD  + LD+   +  + +    +    A  D  ER D     +
Sbjct: 130 FLAWLEDFEYGKLALPRPDLVLFLDMDPAVSRR-LIAARAAASGAARDIHER-DEGYLVR 187

Query: 173 RRQIFLDIARNQP-DRCHIVDSAHSF--QSVATNILNIVWELV 212
             +  +++A      R    ++      ++V   I   V  ++
Sbjct: 188 CHRASVNLAARCGWQRVRCSEAGEPLSREAVHEKIYEAVRRIL 230


>gi|219685925|ref|ZP_03540727.1| dTMP kinase [Borrelia garinii Far04]
 gi|219672537|gb|EED29574.1| dTMP kinase [Borrelia garinii Far04]
          Length = 202

 Score =  121 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 20/211 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      +  +  L++         
Sbjct: 8   FYCIEGIDGSGKTSITNKLKTLCNDESR-YYFTKEPSNGIIGKMIKEQLMNFEN-PLKES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L    K ++ DR+L SS AYQG              E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDIFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               + +++   +S +         ++ L++
Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLIK 201


>gi|78224441|ref|YP_386188.1| thymidylate kinase [Geobacter metallireducens GS-15]
 gi|78195696|gb|ABB33463.1| thymidylate kinase [Geobacter metallireducens GS-15]
          Length = 211

 Score =  121 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 29/226 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G  I  EGI G+G+   +      L + L    YDV     P    A E     LL+
Sbjct: 1   MRKGKLIVIEGISGSGQ--QVKAAIVGLHKALTGMKYDVVECANPDSGRAKELGIDNLLN 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-L 115
                    A+ +  AA R +  +N++ PAL + KI+LC +   SS A       ++H  
Sbjct: 59  WPFGR-TPRADFMFEAAVRTEVFKNIVEPALQDDKIVLCKQSSISSLANAWVSGYTKHFD 117

Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            L  ++++S   +      PD T+ +D+P     +R+++   +     ++Y+E       
Sbjct: 118 VLRHIEKLSRGFLFEDEIYPDLTLFIDVPAQEAFERIEDVLQIHHEGGIEYYE------- 170

Query: 171 EKRRQIFLDIARNQPDRCH----IVDSAHSFQSVATNILNIVWELV 212
            K R+ +L     +  R H       +  S + +  +I   V  ++
Sbjct: 171 -KMREFYLK----EISRWHGASIAAGADRSEEEINADIWAKVQTIL 211


>gi|325680793|ref|ZP_08160331.1| dTMP kinase [Ruminococcus albus 8]
 gi|324107573|gb|EGC01851.1| dTMP kinase [Ruminococcus albus 8]
          Length = 217

 Score =  121 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 18/217 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DE 61
            I  EG++G+GK+T    L  +L+ K+  +     P     +     + L+  +    + 
Sbjct: 4   LIVLEGLDGSGKSTQFEKLTEYLKGKDVKLKAISFPDYNDPSSTLVQMYLNGEIAGSAEA 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--LDS 119
             A A +  +AA R    +        EG ++L  R++ S+  YQ  +   +     L+ 
Sbjct: 64  VNAYAASSFYAADRYVSYKKYWEKDHAEGSLILAARYVTSNCIYQMTKLPEEQWESYLEW 123

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L++     +    P   I LD+P++I  K +  RY   ES   D  E+ ++    K R  
Sbjct: 124 LEDYEYEKLGLPKPTKVIFLDMPIEISQKLLSARYDGDESKK-DIHEK-NIEFLYKCRSA 181

Query: 177 FLDIARNQPDRCHIVDSAH-----SFQSVATNILNIV 208
            L  A+ Q    HI++        S + +   I+ ++
Sbjct: 182 ALFTAKRQG--WHIIECGRDGEPLSIEEIFGKIIELI 216


>gi|310659451|ref|YP_003937172.1| thymidylate kinase [Clostridium sticklandii DSM 519]
 gi|308826229|emb|CBH22267.1| putative thymidylate kinase [Clostridium sticklandii]
          Length = 231

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 18/226 (7%)

Query: 4   GLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
           G     E G + +GK T   LL   L+   Y+V     P     + A   + L       
Sbjct: 2   GRLFVVESGSDASGKATQTELLYNKLKMDGYNVRKIEFPNYKSESSALVKMYLRGDFGSK 61

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115
            ++      +  +A  R    +         G I++ DR+  S+  +Q  +    + +  
Sbjct: 62  PEDVNPYITSTFYAVDRYASFKTSWEEFYNNGGIIIADRYTTSNMVHQAAKYDDYNDKDK 121

Query: 116 FLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FL  L E          P     L++PV+   K ++NR +             +    EK
Sbjct: 122 FLQWLDEYEFDFYGLPRPTKVFFLNMPVEFSFKLMKNRKNKITGNVKKDIHEANKDYLEK 181

Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
             +  L +A+        +D          + +   I +++ + ++
Sbjct: 182 SYENALYVAKKYG--WENIDCTSDDKLRQIKDIHEEIYSLILKSLK 225


>gi|219684919|ref|ZP_03539860.1| thymidylate kinase [Borrelia garinii PBr]
 gi|219671657|gb|EED28713.1| thymidylate kinase [Borrelia garinii PBr]
          Length = 202

 Score =  121 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 20/211 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      +  +  L++         
Sbjct: 8   FYCIEGIDGSGKTSITNKLKTLCNDESR-YYFTKEPSNGIIGKMIKEQLMNFEN-PLKES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L    K ++ DR+L SS AYQG              E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               + +++   +S +         ++ L++
Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLIK 201


>gi|119113986|ref|XP_314179.3| AGAP005260-PA [Anopheles gambiae str. PEST]
 gi|116128380|gb|EAA09514.4| AGAP005260-PA [Anopheles gambiae str. PEST]
          Length = 211

 Score =  121 bits (304), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 18/212 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG +  GKTT    L   L + N        P  +       +  L+   D+
Sbjct: 7   KRGAFIVLEGCDRTGKTTQCKTLVDKLMQVNIRAQYMNFPDRSTQCGQLINGYLTRK-DD 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F  E   ++F   R + ++  +   L  G  L+ DR+  S  A+   +     L ++  +
Sbjct: 66  FTDEGIHLLFTLNRWERMKE-MEKLLKAGVNLIVDRYSYSGVAFSSAKG----LDMEWCK 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD  I+L L +D  L R       R     + +E       +K  + +  + 
Sbjct: 121 APESGLLKPDLVILLTLSMD-ALAR-------RGGFGDERYEVAG--FQKKVIERYGML- 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                    +D+  +F  V   +   V   ++
Sbjct: 170 -KDDRYWKAIDADKTFDDVTAVLYEEVLRAIE 200


>gi|26353426|dbj|BAC40343.1| unnamed protein product [Mus musculus]
          Length = 212

 Score =  121 bits (304), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGKTT    L   L    +   + R P  +       +  L    + 
Sbjct: 4   RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTE- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  +
Sbjct: 63  LEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTGAK---ENFSLDWCK 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD        + + L+      + R    L+    +     ++    F  + 
Sbjct: 119 QPDVGLPKPD--------LILFLQLQLLDAAARGEFGLER--NETGTFQKQVLLCFQQLM 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             +     +VD++ S + V   I     + ++
Sbjct: 169 EEKNLNWKVVDASKSIEEVHKEIRAHSEDAIR 200


>gi|72078995|ref|XP_784160.1| PREDICTED: similar to thymidylate kinase, partial
           [Strongylocentrotus purpuratus]
 gi|115729707|ref|XP_001201706.1| PREDICTED: similar to thymidylate kinase, partial
           [Strongylocentrotus purpuratus]
          Length = 171

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 15/184 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  + FEG + +GK+T    L   +  K     + R P  +          L    D
Sbjct: 1   MRRGALVVFEGCDRSGKSTQCKKLVESMLEKGMKAELMRFPERSTVIGKLIDSYLKNSKD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F+A R + ++  +   L EG  L+ DR+  S  A+   ++      L+  
Sbjct: 61  -VQDNAIHLLFSANRWE-LKPEMERKLNEGVTLVVDRYAYSGVAFTAAKEGIS---LNWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   V   +PD  + L +  +   KR             + +E+    I  +  + F  +
Sbjct: 116 KRPDVGLPLPDLVLFLKVSSEAAEKR--------GGFGEERYEK--SEIQARVAKNFEKL 165

Query: 181 ARNQ 184
             N 
Sbjct: 166 QEND 169


>gi|54026585|ref|YP_120827.1| thymidylate kinase [Nocardia farcinica IFM 10152]
 gi|54018093|dbj|BAD59463.1| putative thymidylate kinase [Nocardia farcinica IFM 10152]
          Length = 215

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61
           GL I+ EG++GAGK T    +   L  +         P  G +  A+ A   L     D 
Sbjct: 2   GLLIALEGLDGAGKRTLTDAVVAALGARGVRAATLGFPRYGRSVHADLAAEALHGAHGDL 61

Query: 62  FGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
             +  A A++FA  R +  + + + AL +  I++ DR++ S+ AY   R   S+    + 
Sbjct: 62  ASSVYAMALLFALDRAEARDELSK-ALADNDIVILDRYVASNAAYNAARLHQSATGEIVG 120

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
              ++         PD  ++LD+  ++  +R + R  L     LD +ER D  +  +   
Sbjct: 121 WTADLEFGRFGLPEPDVQLLLDVDTEVAAERARRRTELDADRPLDAYER-DGGLQRRTLA 179

Query: 176 IFLDIARNQ 184
           ++ ++A   
Sbjct: 180 VYRELAERN 188


>gi|224533463|ref|ZP_03674056.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a]
 gi|224513425|gb|EEF83783.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a]
          Length = 202

 Score =  120 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + TREP      E  R  L++         
Sbjct: 8   FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTREPSSGIIGEMIRKQLMNFEN-PLEES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L  + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209
               + +++   +S        A  I N++ 
Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201


>gi|328776703|ref|XP_624530.3| PREDICTED: thymidylate kinase-like [Apis mellifera]
          Length = 214

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 80/213 (37%), Gaps = 18/213 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  I  EG + AGK+T   +L   L   N  V +   P  T       +  L+   +
Sbjct: 3   IRRGALIVLEGCDRAGKSTQAKMLITALNNLNIPVELHSFPNRTTTIGEIINNFLTKKTE 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E   ++F+A R +  ++ I   L +G  L+ DR+  S         ++    L+  
Sbjct: 63  -LPPETIHLLFSANRWE-CKDEILKTLYKGTTLIIDRYAASGA---AYTAATTGKNLNWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +E       PD  I L +         +   SLR +   + FE  +V   E     +  +
Sbjct: 118 REPDSGLPSPDLVIYLSIS--------KKSQSLRSNWGDERFE--NVEFQELVASNYEKL 167

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                   +++++      + + IL  V + ++
Sbjct: 168 IDK---TWYVINADDDKSVIHSQILEKVIDTIK 197


>gi|225376152|ref|ZP_03753373.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM
           16841]
 gi|225211979|gb|EEG94333.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM
           16841]
          Length = 206

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+ +G  G GK+T I  +K  L+   Y V++TREP  T      R        ++  
Sbjct: 9   GYFIAVDGPNGVGKSTLIEAIKNKLEVLGYAVYITREPTDTKLGNYLREF-----AEKHS 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + A + AA R +H+ N I PAL EG++++ DR++ SS   Q     S    L +  EI
Sbjct: 64  GISLACLVAADRYEHMTNEIIPALEEGQLVISDRYILSSLILQEMDGVSATFVLTANSEI 123

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-------SACLDYFER 164
               + PD  + +     +  KR+  R +L          + LD+ ER
Sbjct: 124 ----IKPDLQLAVFADERVLQKRLSERDTLTRFEKGNQSKSELDFMER 167


>gi|41409459|ref|NP_962295.1| thymidylate kinase [Mycobacterium avium subsp. paratuberculosis
           K-10]
 gi|41398290|gb|AAS05911.1| Tmk [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 210

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 11/211 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T    L++  +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60

Query: 63  GA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
            +  A A++FA  R   V + I     +  +++ DR++ S+ AY   R    +    +  
Sbjct: 61  SSVYAMAMLFALDRAAAVGD-IEGLRRDHDVVIMDRYVASNAAYTAARLHQDADGPAVAW 119

Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +    +    PD  ++L +  ++  +R ++R         D +ER D  + ++   +
Sbjct: 120 VHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYER-DDGLQQRTGAV 178

Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206
           +  +A         +VD+      +A ++  
Sbjct: 179 YAQLAAAGWGGAWRVVDADVDPARLAADLAA 209


>gi|242238410|ref|YP_002986591.1| thymidylate kinase [Dickeya dadantii Ech703]
 gi|242130467|gb|ACS84769.1| thymidylate kinase [Dickeya dadantii Ech703]
          Length = 223

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 28/231 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTREPGGTPAAEAARH 52
           N G FI+FEG +GAGK+T    +               KN+ V  +    G       R 
Sbjct: 3   NKGFFIAFEGNDGAGKSTVSRDIYDSIVTIYPNTTFLDKNHPVLESGY--GMYHMGKIRE 60

Query: 53  VLLSCGV----DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
           +L    +    DE G     ++ ++        +I+PAL EGKI++ D +     A    
Sbjct: 61  ILWDYDISAPLDELGDSHWLLLLSSWFAALDYGIIKPALNEGKIIISDGWFYKYIARFSL 120

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           +     +  +   E+      PD TI LD+   +   R +      ES  L+    K++ 
Sbjct: 121 K---NDIMRNIANEVFNLSTEPDLTIYLDVTPRVAATRKET-LKPSESGMLE--NDKNLN 174

Query: 169 I---HEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKR 215
                +  R+ +   ++   D+   +++   S + +  +I+ I+   ++K+
Sbjct: 175 FSSYQQLVREQY---SKFFNDKWIHMNTTDLSPEYLKVHIIEIIKSNLEKQ 222


>gi|225549383|ref|ZP_03770355.1| thymidylate kinase [Borrelia burgdorferi 94a]
 gi|225370011|gb|EEG99452.1| thymidylate kinase [Borrelia burgdorferi 94a]
 gi|312149482|gb|ADQ29553.1| thymidylate kinase [Borrelia burgdorferi N40]
          Length = 202

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++         
Sbjct: 8   FYCIEGIDGSGKTSITNKLKDLCNDESR-YYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L  + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209
               + +++   +S        A  I N++ 
Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201


>gi|195941996|ref|ZP_03087378.1| thymidylate kinase (tmk) [Borrelia burgdorferi 80a]
          Length = 257

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++         
Sbjct: 63  FYCIEGIDGSGKTSITNKLKALCNDES-KYYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 120

Query: 66  AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L  + + ++ DR+L SS AYQG+             E
Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 225

Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209
               + +++   +S        A  I N++ 
Sbjct: 226 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 256


>gi|118463240|ref|YP_883352.1| thymidylate kinase [Mycobacterium avium 104]
 gi|254776646|ref|ZP_05218162.1| thymidylate kinase [Mycobacterium avium subsp. avium ATCC 25291]
 gi|118164527|gb|ABK65424.1| thymidylate kinase [Mycobacterium avium 104]
          Length = 210

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 11/211 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T    L++  +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60

Query: 63  GA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
            +  A A++FA  R   V + I     +  +++ DR++ S+ AY   R    +    +  
Sbjct: 61  SSVYAMAMLFALDRAAAVGD-IEGLRRDHDVVIMDRYVASNAAYTAARLHQDADGPAVAW 119

Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +    +    PD  ++L +  ++  +R ++R         D +ER D  + ++   +
Sbjct: 120 VHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYER-DDGLQQRTGAV 178

Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206
           +  +A         +VD+      +A ++  
Sbjct: 179 YAQLAAAGWGGAWRVVDADVDPARLAADLAA 209


>gi|225551698|ref|ZP_03772642.1| thymidylate kinase [Borrelia sp. SV1]
 gi|225371725|gb|EEH01151.1| thymidylate kinase [Borrelia sp. SV1]
          Length = 202

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++         
Sbjct: 8   FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTKEPSSGIIGELIREQLMNFEN-PLEES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L  + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209
               + +++   +S        A  I N++ 
Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201


>gi|268529284|ref|XP_002629768.1| Hypothetical protein CBG01006 [Caenorhabditis briggsae]
          Length = 213

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 77/223 (34%), Gaps = 32/223 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I FEG++ +GK+T    L   +        +   P   +P  E     L   G  +
Sbjct: 11  RGALIVFEGLDRSGKSTQAQRLVEKIINSGRMAVLQAFPDRQSPVGEMIDRYL--RGEID 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R    + +I+  + +G  ++CDR+  S  +Y   +   +    D ++
Sbjct: 69  MDEHALHLLFSADRF-LKKKMIKQHIAQGVDVVCDRYCYSGVSYSLAKGLPE----DWVR 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  +   +  ++   R             +  E   +           ++A
Sbjct: 124 VTDQGLPKPDIVLFFQVSPEVAASR--------GGFGNERLETAQLQ---------AEVA 166

Query: 182 R-----NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
           +             V++  +  +V   +  +  EL   R  PL
Sbjct: 167 KVMPTLRDDAFWKSVNADAALAAVEKEVFQLYTEL--DRSKPL 207


>gi|216264232|ref|ZP_03436224.1| thymidylate kinase [Borrelia burgdorferi 156a]
 gi|218249745|ref|YP_002375292.1| thymidylate kinase [Borrelia burgdorferi ZS7]
 gi|221217600|ref|ZP_03589069.1| thymidylate kinase [Borrelia burgdorferi 72a]
 gi|223889303|ref|ZP_03623890.1| thymidylate kinase [Borrelia burgdorferi 64b]
 gi|224532921|ref|ZP_03673532.1| dTMP kinase [Borrelia burgdorferi WI91-23]
 gi|225550262|ref|ZP_03771221.1| thymidylate kinase [Borrelia burgdorferi 118a]
 gi|226320838|ref|ZP_03796390.1| thymidylate kinase [Borrelia burgdorferi 29805]
 gi|226321258|ref|ZP_03796786.1| thymidylate kinase [Borrelia burgdorferi Bol26]
 gi|215980705|gb|EEC21512.1| thymidylate kinase [Borrelia burgdorferi 156a]
 gi|218164933|gb|ACK74994.1| thymidylate kinase [Borrelia burgdorferi ZS7]
 gi|221192546|gb|EEE18764.1| thymidylate kinase [Borrelia burgdorferi 72a]
 gi|223885224|gb|EEF56327.1| thymidylate kinase [Borrelia burgdorferi 64b]
 gi|224512159|gb|EEF82549.1| dTMP kinase [Borrelia burgdorferi WI91-23]
 gi|225369130|gb|EEG98584.1| thymidylate kinase [Borrelia burgdorferi 118a]
 gi|226233290|gb|EEH32041.1| thymidylate kinase [Borrelia burgdorferi Bol26]
 gi|226233704|gb|EEH32433.1| thymidylate kinase [Borrelia burgdorferi 29805]
 gi|312147845|gb|ADQ30504.1| thymidylate kinase [Borrelia burgdorferi JD1]
          Length = 202

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++         
Sbjct: 8   FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L  + + ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209
               + +++   +S        A  I N++ 
Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201


>gi|149174610|ref|ZP_01853236.1| Thymidylate kinase [Planctomyces maris DSM 8797]
 gi|148846720|gb|EDL61057.1| Thymidylate kinase [Planctomyces maris DSM 8797]
          Length = 222

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 95/220 (43%), Gaps = 16/220 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVL--LSCGVDEF 62
           I+ EGI+G+GK T  + L    Q +     +   P    T   ++    L      +DE 
Sbjct: 5   IAIEGIDGSGKGTQAARLHARCQAEGIKTSLIGFPRYDQTLFGKSIGDFLNGRFGELDEV 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSL 120
                ++++A  R +   + I   +    +++ DR++ S+ A+QG +   + +  F++ +
Sbjct: 65  NPFLASLLYAGDRFES-RSHILNTIETSDVVIFDRYIPSNVAHQGAKLSGAERSEFIEWI 123

Query: 121 QEISVQE-VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++I      MP  +  I+LDLP D   K +  + +   +  +   +  D       R+++
Sbjct: 124 EQIEYAIYKMPRLNLAILLDLPADYAQKLIAEKQARSYTEKVADLQEADQTYLANVREVY 183

Query: 178 LDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELV 212
           L +A         +     ++  S + ++  I + V +L+
Sbjct: 184 LQLAEEN-QHWQKIQCLQKETLRSIEEISDEIWSYVSKLI 222


>gi|15595138|ref|NP_212927.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31]
 gi|2688733|gb|AAC67140.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31]
          Length = 257

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  R  L++         
Sbjct: 63  FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 120

Query: 66  AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L  + + ++ DR+L SS AYQG+             E
Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    ++   +I  +R+Q   +       D FE +     E+    +L I +
Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 225

Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209
               + +++   +S        A  I N++ 
Sbjct: 226 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 256


>gi|33563152|dbj|BAC81723.1| pseudo thymidylate kinase [Onion yellows phytoplasma]
          Length = 174

 Score =  119 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 18/182 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I  L+  L+       + +  G +   +  R + L+    +   
Sbjct: 2   KLIVFEGLDGSGKTSLIHALQPLLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +           + +      ++++ DR+L S+YAYQ    S +   L  L++I 
Sbjct: 57  LTRFYLSLVNMAQIQAELFK----NNQLIILDRWLPSTYAYQLFPFSKEKKQLSPLKKIF 112

Query: 125 VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     PD  I LD+   IG  R + + + +     D  ER+ +   +  RQ +  
Sbjct: 113 KLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERQSLTYFQNVRQGYRS 168

Query: 180 IA 181
           ++
Sbjct: 169 LS 170


>gi|283481645|emb|CAZ69761.1| putative thymidylate kinase [Emiliania huxleyi virus 99B1]
          Length = 327

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 16/218 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVL--LSCG 58
             G     EG +G GK T  +LL+R L++++Y V     P          R +L      
Sbjct: 104 RRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGD 163

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +        A ++A  R   V++++   +  G  ++ DR++ S+ A+QG  +     ++ 
Sbjct: 164 IKNLDPFLFASLYAQNRW-SVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222

Query: 119 SLQEISVQEV--MPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              E+   E+  +P     I LDLP ++              A LD  E   +      R
Sbjct: 223 KQTELFENEILGLPHANHIIYLDLPPEVAR---TAMDKDTTRAALDQNELAPLEYKNNVR 279

Query: 175 QIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNI 207
           +I+L+          +V     D   S + V   I +I
Sbjct: 280 KIYLEQKNTLRRTYDVVKCMDDDIRISRKDVHNKIYDI 317


>gi|72392763|ref|XP_847182.1| thymidylate kinase [Trypanosoma brucei TREU927]
 gi|62359227|gb|AAX79670.1| thymidylate kinase, putative [Trypanosoma brucei]
 gi|70803212|gb|AAZ13116.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 345

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 31/226 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVDEFG 63
           I F G +GAGK T    +++ L ++         P       +  R VL      +    
Sbjct: 131 IVFGGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLSGERGALHGLD 190

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
            +  +++F+  R D +  + R  L  GK +L DR+  S++ +Q  +  +S +  F+  L+
Sbjct: 191 PKLFSLLFSLNRFDTLPEL-RYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHLE 249

Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177
           ++ ++ +    PD  + LDLP    L     R   RES  LD  E   +   E  RQ + 
Sbjct: 250 QLELEWLKLPPPDVALYLDLPPAAALV-AMQRDEKRES--LDIHETAGLSYKENVRQTYV 306

Query: 178 -----------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                      ++   ++ +R        S + V   I N V + +
Sbjct: 307 WCCQNQRNWVQIECCNDEGERY-------SREKVHEMIYNAVAKHI 345


>gi|224531531|ref|ZP_03672163.1| thymidylate kinase [Borrelia valaisiana VS116]
 gi|224510996|gb|EEF81402.1| thymidylate kinase [Borrelia valaisiana VS116]
          Length = 202

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+  + LK     ++   + T+EP      E  +  L++         
Sbjct: 8   FYCIEGIDGSGKTSITNKLKTLCNDES-KYYFTKEPSSGIIGEMIKEQLMNFKN-PLQES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L    I ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRNDHLYKKGGILETLNTKSIKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    +++  ++  +R+Q           D FE +     E+    +L I +
Sbjct: 116 LNKNFPLPEKVFFIEIEPNLAYERIQK-----HRTQSDLFELERYKTFEQIALKYLKIFK 170

Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209
               + +++   +S        A  I N++ 
Sbjct: 171 KLEKKINVIYINNSIKGDLDKNAKKIFNLIK 201


>gi|57167762|ref|ZP_00366902.1| thymidylate kinase [Campylobacter coli RM2228]
 gi|57020884|gb|EAL57548.1| thymidylate kinase [Campylobacter coli RM2228]
          Length = 185

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 13  EGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           +  GK+T ISLLK   +    +   T EPGGT      R +LL     +   + E ++F 
Sbjct: 2   DCVGKSTQISLLKECFK----EAVFTAEPGGTKLGNHLRELLLYKPY-QLDKKTELLLFL 56

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           A R  H E +++    + K+++ DR   S  AY  +    ++  L  L   +++   P  
Sbjct: 57  ADRAQHCEEILKA--NQDKLIISDRSFISGMAYAKDF---ENEELFRLNAFALENFFPQK 111

Query: 133 TIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            I L    ++  +R+ Q      E   +DYF    + + +K       +      +   +
Sbjct: 112 VIFLKGDENLIKERLSQKEQDAIEKRGIDYF----LSVQDKLENTLYFLKEKINLQVLTL 167

Query: 192 DSAHSFQSVATNILNIVW 209
           ++  + +++   I + + 
Sbjct: 168 NANDTKENLHQKIKDFLQ 185


>gi|183981320|ref|YP_001849611.1| thymidylate kinase Tmk [Mycobacterium marinum M]
 gi|183174646|gb|ACC39756.1| thymidylate kinase Tmk [Mycobacterium marinum M]
          Length = 217

 Score =  119 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 11/211 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T    L++  +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
            +  A A +FA  R   V+  I    +  ++++ DR++ S+ AY   R         +  
Sbjct: 61  SSVFAMATLFALDRAAAVDE-IHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGEAVAW 119

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +         PD  ++L +PV++  +R + R         D +ER D  + ++   +
Sbjct: 120 VGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYER-DDGLQQRTGSV 178

Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206
           + ++A      R  +VD+     ++A  +++
Sbjct: 179 YAELAAAGWGGRWLVVDADVDPGALAATLMS 209


>gi|323347864|gb|EGA82125.1| Cdc8p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 168

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + + + I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIIL---DLP 139
            +  V  + PD T+ L   D+ 
Sbjct: 116 LQPDVGLLKPDLTLFLSTQDVD 137


>gi|317061547|ref|ZP_07926032.1| thymidylate kinase [Fusobacterium sp. D12]
 gi|313687223|gb|EFS24058.1| thymidylate kinase [Fusobacterium sp. D12]
          Length = 226

 Score =  119 bits (299), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 13/223 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57
           N G  I  EG + +GK T   LL      +         P  +  A     + L+     
Sbjct: 4   NMGKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYLAGEFGL 63

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGER--DSSQH 114
             ++      + ++A  R    +        +  +L + DR++ S+  +Q  +     + 
Sbjct: 64  DAEKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQGEEKE 123

Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            +L  L+ +     Q   PD  I LD+P     + ++ R +             +    E
Sbjct: 124 HYLSWLETLEYEQFQIPRPDFVIFLDMPTKQAQELMRERKNKMTGESAKDIHENNQEYLE 183

Query: 172 KRRQIFLDIARNQPD-RCHIVDSAH--SFQSVATNILNIVWEL 211
           K  Q   D+A      R   VD     S + +   I   V E+
Sbjct: 184 KSYQNACDMAERYHWIRISCVDGERIKSMEEIQKEIWEKVREV 226


>gi|118618060|ref|YP_906392.1| thymidylate kinase [Mycobacterium ulcerans Agy99]
 gi|118570170|gb|ABL04921.1| thymidylate kinase Tmk [Mycobacterium ulcerans Agy99]
          Length = 222

 Score =  118 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 11/211 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T    L++  +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60

Query: 63  GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
            +  A A +FA  R   V+  I    +  ++++ DR++ S+ AY   R         +  
Sbjct: 61  SSVFAMATLFALDRAAAVDE-IHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGEAVAW 119

Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +         PD  ++L +PV++  +R + R         D +ER D  + ++   +
Sbjct: 120 VGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYER-DDGLQQRTGSV 178

Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206
           + ++A      R  +VD+     ++A  +++
Sbjct: 179 YAELAAAGWGGRWLVVDADVDPGALAATLMS 209


>gi|73852905|ref|YP_294189.1| putative thymidylate kinase [Emiliania huxleyi virus 86]
 gi|72415621|emb|CAI65858.1| putative thymidylate kinase [Emiliania huxleyi virus 86]
          Length = 327

 Score =  118 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 11/185 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVL--LSCG 58
             G     EG +G GK T  +LL+R L++++Y V     P          R +L      
Sbjct: 104 RRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGD 163

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +        A ++A  R   V++++   +  G  ++ DR++ S+ A+QG  +     ++ 
Sbjct: 164 IKNLDPFLFASLYAQNRW-SVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222

Query: 119 SLQEISVQEV--MPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              E+   E+  +P     I LDLP ++                LD  E   +      R
Sbjct: 223 KQTELFENEILGLPHANHIIYLDLPPEVAR---TAMDKDTTRVALDQNELAPLEYKNNVR 279

Query: 175 QIFLD 179
           +I+L+
Sbjct: 280 KIYLE 284


>gi|145503822|ref|XP_001437883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405044|emb|CAK70486.1| unnamed protein product [Paramecium tetraurelia]
          Length = 205

 Score =  118 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 81/209 (38%), Gaps = 23/209 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLFI  EG++  GK+T   LL   L     D    + P  + +        L    D 
Sbjct: 5   RRGLFIVLEGLDKCGKSTQTELLSEAL-----DAKKMQFPDRSTSMGLIISDYLKGKRD- 58

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +   ++F+A R +    +I   L +G  ++CDR+  S  A+   +     L +   +
Sbjct: 59  INDQVIHLLFSANRWEAQNTIIE-TLNKGINIVCDRYAYSGVAFSSAKG----LPIQWCK 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +       PD  I L  P+         +   R     + +E+++     +       +A
Sbjct: 114 QCDSGLPKPDLVIYLRAPI--------KQLKDRGDFGAERYEKQEFQQQVQEVF--DKMA 163

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + +    +I+ +  + + + + I+ ++ +
Sbjct: 164 QEEQ--FNIISAIQTKEEIFSQIMELIND 190


>gi|257464026|ref|ZP_05628411.1| thymidylate kinase [Fusobacterium sp. D12]
          Length = 222

 Score =  118 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 75/221 (33%), Gaps = 13/221 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL      +         P  +  A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYLAGEFGLDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGER--DSSQHLF 116
           ++      + ++A  R    +        +  +L + DR++ S+  +Q  +     +  +
Sbjct: 62  EKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQGEEKEHY 121

Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L+ +     Q   PD  I LD+P     + ++ R +             +    EK 
Sbjct: 122 LSWLETLEYEQFQIPRPDFVIFLDMPTKQAQELMRERKNKMTGESAKDIHENNQEYLEKS 181

Query: 174 RQIFLDIARNQPD-RCHIVDSAH--SFQSVATNILNIVWEL 211
            Q   D+A      R   VD     S + +   I   V E+
Sbjct: 182 YQNACDMAERYHWIRISCVDGERIKSMEEIQKEIWEKVREV 222


>gi|118468484|ref|YP_886239.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155]
 gi|118169771|gb|ABK70667.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155]
          Length = 210

 Score =  118 bits (297), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 15/203 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLSCGVDE 61
           + I+ EG++GAGK T  + L+   +  +  V     P      PA  AA  +  S G   
Sbjct: 1   MLIAIEGVDGAGKRTLTNGLRAAFETNHKSVASLAFPRYHQSVPADLAAEALRGSHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
               A A +FA  R       I        +++ DR++ S+ AY   R         +  
Sbjct: 61  ESVYAMATLFALDRAG-AREQIEHLQAAYDVVILDRYVASNAAYSAARLHQGVDGEVVTW 119

Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + E+    +   +PD  ++L++P ++  +R ++R +       D +ER D  +  +  ++
Sbjct: 120 VHELEFGRLHLPVPDWQVLLNVPTELAAQRAEHRANTEADRAKDAYER-DDGLQRRTGEV 178

Query: 177 FLDIARNQ-PDRCHI----VDSA 194
           +  +A      R  I    VD+ 
Sbjct: 179 YAALAAADWGGRWAIAGPDVDAT 201


>gi|282174114|ref|YP_003358216.1| ORF77 [Anguillid herpesvirus 1]
 gi|281308957|gb|ADA57840.1| ORF77 [Anguillid herpesvirus 1]
          Length = 214

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 19/206 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ EG +  GK+T  + L          VH  +   GT      R    +       
Sbjct: 16  GRLIAVEGCDRTGKSTLCARLAETWPESITAVHFPKM-EGTFTGSVLRTAFKTP-FVRSN 73

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++F+A R + + + I   L +GKI++CDR+  S  AY   +   Q    +  +  
Sbjct: 74  PRIMHLLFSANRWELM-DFIGAELAKGKIVVCDRYFGSGLAYSMVKGLDQ----EWCEGP 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             + + PD TI LD P+   +KR       ++      FE +      K   I+  +AR 
Sbjct: 129 DRRLIQPDATIYLDAPLSALMKR-------KDWGADTVFETE--EFQSKLIPIYDKLARE 179

Query: 184 QPDRCHIVDSA-HSFQSVATNILNIV 208
              R   +D+      +V T +   +
Sbjct: 180 --KRWTRIDADLLDADAVYTLVEGYI 203


>gi|237786074|ref|YP_002906779.1| thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758986|gb|ACR18236.1| Thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 219

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 20/223 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + ++ EGI+GAGK T ++ +++ L  +   V +   P    +  A+ AR  L     D  
Sbjct: 1   MIVACEGIDGAGKNTLVTAIEKELVEREKPVALVSFPRYNDSVHAQLARSALYGGMGDVV 60

Query: 63  GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL------ 115
            +    A +FA  R + + + I     +G  +L DRF+ S+ AY   R            
Sbjct: 61  DSACGMATLFALDRAE-IADDIAELSEDGYFVLIDRFVASNAAYTAARSGWDGQSPSQDN 119

Query: 116 ----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
               ++  L+   +   +PD  + L  P  +  +R   R     S   D FE+ D  + +
Sbjct: 120 PTVSWIAELEFERLGIPVPDLHVFLSTPPRLASERAVAREGEDASRARDAFEK-DSDLQQ 178

Query: 172 KRRQIFLDIARNQPDR-CHIVDSAHSFQSVATNILNIVWELVQ 213
           +    +  +AR+Q      +V        V      +V  +++
Sbjct: 179 RTAAAYEALARDQWQSPWVVV----EPGEVTRQATEVVEAILR 217


>gi|72117012|ref|XP_789676.1| PREDICTED: similar to thymidylate kinase [Strongylocentrotus
           purpuratus]
 gi|115961274|ref|XP_001189465.1| PREDICTED: similar to thymidylate kinase [Strongylocentrotus
           purpuratus]
          Length = 181

 Score =  118 bits (297), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 15/184 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  + FEG + +GK+T    L   +  K     + R P  +          L    D
Sbjct: 1   MRRGALVVFEGCDRSGKSTQCKKLVESMLEKGMKAELMRFPERSTVIGKLIDSYLKNSKD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  ++F+A R + ++  +   L EG  L+ DR+  S  A+   ++      L+  
Sbjct: 61  -VQDNAIHLLFSANRWE-LKPEMERKLNEGVTLVVDRYAYSGVAFTAAKEGIS---LNWC 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   V   +PD  + L +  +   KR             + +E+    I  +  + F  +
Sbjct: 116 KRPDVGLPLPDLVLFLKVSSEAAEKR--------GGFGEERYEK--SEIQARVAKNFEKL 165

Query: 181 ARNQ 184
             N 
Sbjct: 166 QEND 169


>gi|240172610|ref|ZP_04751269.1| thymidylate kinase [Mycobacterium kansasii ATCC 12478]
          Length = 214

 Score =  118 bits (296), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 11/207 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T    L+   Q     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAVEGVDGAGKRTLTVRLRAAFQAVGKSVVTLAFPRYGRSVTADIAAEALHGQHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116
             A A A +FA  R       I        +++ DR++ S+ AY   R           +
Sbjct: 61  SSAYAMATLFALDRAGAAAE-IAELRRNYDVVILDRYVASNAAYSAARLREDAGGPAVAW 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  ++   +   +PD  ++L +P D+  +R ++R         D +ER D  +  +   +
Sbjct: 120 VQQIEYQRMGLPVPDWQVLLAVPADLAAQRARSRAEADPGRARDSYER-DDELQRRTGVV 178

Query: 177 FLDIARNQ-PDRCHIVDSAHSFQSVAT 202
           +  +A      R  +VDS      +A 
Sbjct: 179 YAQLAAADWNGRWLVVDSDVDPDRLAA 205


>gi|331695112|ref|YP_004331351.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190]
 gi|326949801|gb|AEA23498.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190]
          Length = 569

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 84/223 (37%), Gaps = 22/223 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE---PGGTPAAEAARHVLLSCGVDE 61
           + I+FEG+ GAGK+T   +L R L+   + V V  +       P +     +L +     
Sbjct: 1   MLITFEGLPGAGKSTQSRMLARCLEANGHHVTVLPDLATLDTEPISATLVDLLRTGDDPF 60

Query: 62  F---GAEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGER-----DS 111
                A  + ++ AA R D V  V+ PAL E    +++ DR + +  +Y          +
Sbjct: 61  LRTGDAITDTMITAAIRADLVATVLDPALAENPAGVVIEDRGIHTMASYAIAALLRQHRA 120

Query: 112 SQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              + LD L  + ++    P   + L +P ++  +R   R   R  A  D    +     
Sbjct: 121 PAEIALDWLNALTALAGPRPTRALWLRIPPNVAARRADERGGDRRPASTD----EQRAHL 176

Query: 171 EKRRQIFLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWEL 211
                 +  +A   P      ++D           I   + ++
Sbjct: 177 TWVDHAYALLAERDPQLTVLDVID--LDPVDTHLAIHAALRQI 217


>gi|76664864|emb|CAJ17870.1| thymidylate kinase [Candidatus Phytoplasma solani]
 gi|76664904|emb|CAJ17888.1| thymidylate kinase [Candidatus Phytoplasma solani]
          Length = 115

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 3/113 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +  FISFEG++G GKTT I  LK++L+ ++  V + +  G +   +  R++ L+    
Sbjct: 1   MTN-KFISFEGLDGGGKTTLIKQLKKYLKNQHKKVIICQGLGSSLIGKPIRNLFLNQSN- 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                   ++     L   E +I P+L++G I+L DR+ DS++AYQ +  +  
Sbjct: 59  -LSPNTRFLLSLTNMLQTQEELIIPSLLKGYIVLIDRWYDSTFAYQSDDINLD 110


>gi|302530810|ref|ZP_07283152.1| predicted protein [Streptomyces sp. AA4]
 gi|302439705|gb|EFL11521.1| predicted protein [Streptomyces sp. AA4]
          Length = 716

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 23/209 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I+ EG          + L R+L      V +T +P      E  R   L       
Sbjct: 475 NGFLIAIEGTTAVNTAEQAARLARWLGTGTRPVVLTADP---ALGEQ-RFRTLVSDAALT 530

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G  A+A+V AA R + VE  I+PAL  G +++ +RF+DS  A            L+ L +
Sbjct: 531 GVRAQALVAAAVRAELVERQIQPALDAGSVVVMERFVDSPLASLSAAGELDRDELEGLVD 590

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T++LD                 E           +      +++  ++A 
Sbjct: 591 WATGRLRPDLTVLLD-------------SEHPEDPQP------PLKDQLWVQKLLAEMAA 631

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             PDR  +VD+  S + VA  + + V  +
Sbjct: 632 ADPDRYVVVDAEGSDRDVAVRVRSAVQSV 660


>gi|311739824|ref|ZP_07713658.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304897|gb|EFQ80966.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 204

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 10/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T +S LK  L R    +   R      A  A + +    G     A
Sbjct: 1   MLISIEGIDGAGKNTLVSALKESLDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +FA  R   V++ ++ A     ++L DR++ S+ AY           ++ +  + 
Sbjct: 61  YAMATLFALDRYG-VKDQLQRAKESDTVVLLDRYVASNAAYSAA-RLEDDAVMEWVHNLE 118

Query: 125 VQEV-MP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + +P  D  + LD  V++  +R Q R     S   D +ER D  + E+    +  +A
Sbjct: 119 FGTLSLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER-DGGLQERTAAAYRRLA 177

Query: 182 RN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
                 R     +     ++ + I ++V E
Sbjct: 178 DAGWGGRWI---ATADADTIISAIKDLVGE 204


>gi|326383262|ref|ZP_08204950.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198012|gb|EGD55198.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395]
          Length = 209

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G+ ++ EG++GAGK T +  ++     +   V     P  G +  A+ A   L     D 
Sbjct: 2   GILVAVEGLDGAGKRTIVGRIEAAATDRGASVSTLAFPRYGESITADLASEALHGRHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R      + R AL    +++CDR+  S+ AY   R    +    ++
Sbjct: 62  RESVYAMALLFALDRAAARRQL-REALTAHDLVICDRYCASNAAYSAARLGGGADSEVVE 120

Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + ++         PD  ++L +P D+ + R   R        +D +ER D  +     +
Sbjct: 121 WVADLEFGRFQLPVPDHQLLLGVPPDVAMSRANGRAETDADRPVDSYER-DAELQHAVYR 179

Query: 176 IFLDIARNQ 184
           ++ +   + 
Sbjct: 180 VYGEFVESH 188


>gi|323332865|gb|EGA74268.1| Cdc8p [Saccharomyces cerevisiae AWRI796]
 gi|323354251|gb|EGA86094.1| Cdc8p [Saccharomyces cerevisiae VL3]
          Length = 138

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 5/136 (3%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++  GKTT  ++L + LQ    +  + + P  +       +  L+    
Sbjct: 1   MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +A  ++F+A R + + + I+  L+EGK ++ DR++ S  AY   +  +  + LD  
Sbjct: 58  QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115

Query: 121 QEISVQEVMPDCTIIL 136
            +  V  + PD T+  
Sbjct: 116 LQPDVGLLKPDLTLFF 131


>gi|75761480|ref|ZP_00741445.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|74491041|gb|EAO54292.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
          Length = 228

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 21/222 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
             I+ EGI+G+GKT  +SLL++ L+ K+ +V +   P             LS   +    
Sbjct: 9   KIIAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLSGNEEVNAN 68

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
               ++ ++ +A  R    +       +    LL +RF  SS  YQ  R     +  F+ 
Sbjct: 69  NVDPKSMSLWYALDRW---KEFENSNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQ 125

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRR 174
            + E+    +    PD  I+ DL  +   K V N+          D +E +   I    R
Sbjct: 126 WIFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADVYE-ESADIMSNAR 184

Query: 175 QIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWE 210
            I+ D+A+   +   I++         + + +   ++ ++ +
Sbjct: 185 GIYQDLAKKY-NNIVIINCLDENNKMKTPEEINQIVMKVIED 225


>gi|195335464|ref|XP_002034385.1| GM19929 [Drosophila sechellia]
 gi|194126355|gb|EDW48398.1| GM19929 [Drosophila sechellia]
          Length = 182

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 66/213 (30%), Gaps = 45/213 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEG + +GKTT   LL   L+ K         P  + +     +  L+   D 
Sbjct: 5   KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   ++F+A R +H+                                     LD   
Sbjct: 64  LPDEVIHLMFSANRWEHMNQT----------------------------------LDWCY 89

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD    L  P         N  + R     + +E+  V    +  ++F  I 
Sbjct: 90  APESGLIKPDAVFYLRAP--------SNELTNRGQYGDERYEK--VEFQGRVAEVFDRIC 139

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    H  D+  S + +   I  I  EL+ K
Sbjct: 140 SKEASYFHKFDATQSVEDLHALIGRITEELLPK 172


>gi|322830155|gb|EFZ33280.1| thymidylate kinase, putative [Trypanosoma cruzi]
          Length = 351

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 21/226 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63
           I FEG +G GK T   LL   L  + + V     P       E  R VL     G+ +  
Sbjct: 133 IVFEGGDGVGKATQARLLVDRLVDEGHRVSTIEFPSERNRYGELLREVLSGKKGGIQDLD 192

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
            +  +++F+  R   +  + +  +  G  ++ DR+  ++  +Q  +  +  +  F+  LQ
Sbjct: 193 PKLFSLLFSMNRFAFLPEL-QYWMCRGTKIVLDRYYTANCGHQASKFPEEERAGFISHLQ 251

Query: 122 EI-SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +      +P  +  + LDLP       ++          LD  E       E  R+ +L
Sbjct: 252 LMEVSWLRLPPANLVLYLDLPPHAAFSAMKA---DPNRGSLDIHETAQRAYKENVRKTYL 308

Query: 179 DIARNQPDRCHI-----VDSAHSFQSVATNILNIVWELVQKRVSPL 219
               N  +  H      V S  S +           E++++++ P+
Sbjct: 309 WCCENMSNWFHTDCCDCVGSRLSREETHNKAY----EMIERQLIPI 350


>gi|29841447|gb|AAP06479.1| SJCHGC06009 protein [Schistosoma japonicum]
          Length = 238

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 32/236 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           + G+F+  EG +  GKTT  SLL + L    +   + V      TP        L   G 
Sbjct: 6   SRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYL--GGN 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +  + A  ++F A R +     IR A+  G  ++ DR++ S  AY   +      + + 
Sbjct: 64  GDINSHALHLLFTANRWEKQSE-IRNAISNGISVVADRYIYSGIAYTAAKLPPTPNW-EW 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             E+    +  D  I L    +       +  + R     + +E+      ++  + ++ 
Sbjct: 122 CCEMEKGLLEADLVICL--TPENL-----DELNSRNGYGNERYEK--DDFQKRVLENYVR 172

Query: 180 IARN----QPDR------------CHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218
           +++       +              H + +   + + V   I+ +V   ++    P
Sbjct: 173 LSKEVELDNSEWQNNDETGDSVGLWHFIQATNKTVEEVHKCIMVLVKSKLESISGP 228


>gi|255323824|ref|ZP_05364950.1| dTMP kinase [Corynebacterium tuberculostearicum SK141]
 gi|255299004|gb|EET78295.1| dTMP kinase [Corynebacterium tuberculostearicum SK141]
          Length = 204

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 10/210 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T +S LK    R    +   R      A  A + +    G     A
Sbjct: 1   MLISIEGIDGAGKNTLVSALKESFDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +FA  R   V++ ++ A     ++L DR++ S+ AY           ++ + ++ 
Sbjct: 61  YAMATLFALDRYG-VKDQLQRAKESDTVVLLDRYVASNAAYSAA-RLEDDAVMEWVHDLE 118

Query: 125 VQEV-MP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              + +P  D  + LD  V++  +R Q R     S   D +ER D  + E+    +  +A
Sbjct: 119 FGTLCLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER-DGGLQERTAAAYRRLA 177

Query: 182 RN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
                 R     +     ++ + I ++V E
Sbjct: 178 DAGWGGRWI---ATADADTIISAIKDLVGE 204


>gi|237845145|ref|XP_002371870.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
 gi|211969534|gb|EEB04730.1| thymidylate kinase, putative [Toxoplasma gondii ME49]
 gi|221480782|gb|EEE19211.1| thymidylate kinase, putative [Toxoplasma gondii GT1]
 gi|221501447|gb|EEE27223.1| thymidylate kinase, putative [Toxoplasma gondii VEG]
          Length = 273

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 92/270 (34%), Gaps = 60/270 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  + FEGI+ +GK+T   L    L ++ +   + R P   TP  +     L +    
Sbjct: 7   KRGCLVVFEGIDRSGKSTQARLAYERLTKEGHAAELIRFPDRTTPIGQVLDRFLANASWS 66

Query: 61  EFG-------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSS 112
             G        +   ++FAA R +    ++R AL EG+ +L DR+  S  AY  G   S 
Sbjct: 67  SDGQHPQVPPPQLTHLLFAANRWEAQARILR-ALGEGRTVLVDRYSFSGIAYTVGAAPSV 125

Query: 113 QHLFLDSLQEIS---------------------------------VQEVMPDCTIILDLP 139
                  L+  +                                    + PD    LD+ 
Sbjct: 126 AETEATRLRREAEASGDVEKTAEAVAASTAATGAPVDATFCRESERGLLAPDAVFFLDVA 185

Query: 140 VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQ 198
                KR             + +E+  +   E+  Q++     N P     + + + S +
Sbjct: 186 PQETQKR--------GGYGDEVYEK--LATQERVYQVYRQF-DNLP-YWRRIAASSLSIE 233

Query: 199 SVATNILNIVWELVQ----KRVSPLSSKKD 224
            +   +   +  +++     ++ PL S  D
Sbjct: 234 ELHEKLFEQLKSVIEATQPDQLLPLGSTGD 263


>gi|224534161|ref|ZP_03674741.1| dTMP kinase [Borrelia spielmanii A14S]
 gi|224514586|gb|EEF84900.1| dTMP kinase [Borrelia spielmanii A14S]
          Length = 202

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I+ LK     ++   + T+EP      +  +  L++         
Sbjct: 8   FYCIEGIDGSGKTSIINKLKALCNDESR-YYFTKEPSSGIVGKMIKEQLMNFKN-PLKES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L      ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSTKVITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    +    +I  +R+Q   +       D FE +     E+    +L   +
Sbjct: 116 LNKNFPLPEKAFFIKTDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKTFK 170

Query: 183 NQPDRCHI--VDSA--HSFQSVATNILNIVW 209
               + ++  +D++   S       I N++ 
Sbjct: 171 KIEKKINVIYIDNSIKDSLDKNVEKIFNLIK 201


>gi|71423920|ref|XP_812619.1| thymidylate kinase [Trypanosoma cruzi strain CL Brener]
 gi|70877423|gb|EAN90768.1| thymidylate kinase, putative [Trypanosoma cruzi]
          Length = 351

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 23/228 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63
           I FEG +G GK T   LL   L  + + V     P       E  R VL     G+ +  
Sbjct: 133 IVFEGGDGVGKATQARLLVDRLVDEGHRVSSIEFPSERNRYGELLREVLSGKKGGIQDLD 192

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
            +  +++F+  R   +  + +  +  G  ++ DR+  ++  +Q  +  +  +  F+  LQ
Sbjct: 193 PKLFSLLFSMNRFAFLPEL-QYWMCRGTKIVLDRYYTANCGHQASKFPEEERAGFIGHLQ 251

Query: 122 EI-SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +      +P  +  + LDLP       ++          LD  E       E  R+ +L
Sbjct: 252 LMEVSWLRLPPANLVLYLDLPPHAAFSAMK---VDPNRGSLDIHETAQRAYKENVRKTYL 308

Query: 179 DIARNQPDRCHIVD-----SAH-SFQSVATNILNIVWELVQKRVSPLS 220
               N  +  H  D      +  S +       N V+E++++++ P++
Sbjct: 309 WCCENMSNWFHT-DCCDCAGSRLSREETH----NKVYEVIERQLIPIA 351


>gi|167750887|ref|ZP_02423014.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702]
 gi|167656066|gb|EDS00196.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702]
 gi|291557390|emb|CBL34507.1| thymidylate kinase [Eubacterium siraeum V10Sc8a]
          Length = 222

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 80/219 (36%), Gaps = 21/219 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----V 59
           G     EG++G GK+T + +LK      + ++     P    A+       LS       
Sbjct: 9   GKLFVIEGLDGCGKSTQLEMLKA---SADSNIRFISFPNYNSASGEIIKDYLSGKFCEEN 65

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFL 117
              GA      +A  R    +         GK ++  R+  S+  YQ  +        +L
Sbjct: 66  GRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKSRWDEYL 125

Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + L++    +     P+  I LD+PV++  K +  RY   E A  D  E  +V   +  R
Sbjct: 126 EWLEDYEYDKFAIPRPERIIFLDMPVEVSQKLLSARYGGDE-AKKDIHES-NVAFLKACR 183

Query: 175 QIFLDIARNQPDRCHIV---DSAHS--FQSVATNILNIV 208
           +    +        +I+   D  +    + +   +  ++
Sbjct: 184 ET--ALYTADKKGWYILPCSDGENPYTPEKINKELSALI 220


>gi|111222127|ref|YP_712921.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a]
 gi|111149659|emb|CAJ61352.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a]
          Length = 222

 Score =  115 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GLF+S +G  G GK+T ++ +   L+ +   +H T EP  +P     R        +
Sbjct: 1   MRPGLFVSVDGPGGVGKSTTLATVTEILRDQKVPIHATTEPSRSPIGNLIRA-----STN 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A A + A  R  HV   I P L  G +++ DR++ SS   Q        + + ++
Sbjct: 56  SHRGLALAHLVAGDRHHHVTTEIIPRLDAGDVVVSDRYIPSSLVLQRF----DAITIPTI 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
            EI+   + PD  +IL         R+  R  +  S     FER
Sbjct: 112 LEINAGLLQPDLAVILTAAPTAIAARMAARGGVTNS----RFER 151


>gi|158318239|ref|YP_001510747.1| thymidylate kinase [Frankia sp. EAN1pec]
 gi|158113644|gb|ABW15841.1| thymidylate kinase [Frankia sp. EAN1pec]
          Length = 241

 Score =  115 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 21/203 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62
           + ++ EG++GAGK T  S L   +            P     P   A R +L   G +  
Sbjct: 31  MIVAIEGVDGAGKNTLTSRLVEAVTATGRTAGTFAFPRYAAGPLGTAVRAML--DGDERL 88

Query: 63  -----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL 115
                 A A A++FA  R + +  + R  +    +L+ DR+L S+ AY   R     +  
Sbjct: 89  AGLAGSARATALLFALDRANALPELAR-CVAAYDVLIVDRYLGSNAAYGAARLPAPERAE 147

Query: 116 FLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           FLD + E+ +       PD  ++LD+PV+      + R +   +  LD FE  D  +  +
Sbjct: 148 FLDWIAELELTRLGLPRPDLQVLLDVPVETARAGARARAAEDTARALDTFES-DAGLQAR 206

Query: 173 RRQIFLDIARN---QPDRCHIVD 192
             +I+L +A +    P    +VD
Sbjct: 207 CAEIYLSLAADSWVAP--WLVVD 227


>gi|71411881|ref|XP_808153.1| thymidylate kinase [Trypanosoma cruzi strain CL Brener]
 gi|70872296|gb|EAN86302.1| thymidylate kinase, putative [Trypanosoma cruzi]
          Length = 351

 Score =  115 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 15/223 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63
           I FEG +G GK T   LL   L  + + V     P       E  R VL     G+ +  
Sbjct: 133 IVFEGGDGVGKATQTRLLVNRLVDEGHRVSSIEFPSERNRYGELLREVLSGKKGGIQDLD 192

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121
            +  +++F+  R   +  + +  +  G  ++ DR+  ++  +Q  +  +  +  F+  LQ
Sbjct: 193 PKLFSLLFSMNRFAFLPEL-QYWMCRGTKIVLDRYYTANCGHQASKFPEEERAGFIGHLQ 251

Query: 122 EI-SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +      +P  +  + LDLP       ++          LD  E       E  R+ +L
Sbjct: 252 LMEVSWLRLPPANLVLYLDLPPHAAFSAMKA---DPNRGSLDIHETAQRAYKENVRKTYL 308

Query: 179 DIARNQPDRCHI--VDSAHSFQSVATNILNIVWELVQKRVSPL 219
               N  +  H    D A S  S      N V+E++++++ P+
Sbjct: 309 WCCENMSNWFHTNCCDCAGSRLS-REETHNKVYEMIERQIIPI 350


>gi|300701613|ref|XP_002994999.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
 gi|239603498|gb|EEQ81328.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01]
          Length = 199

 Score =  115 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEFG 63
           +F+ FEG++ +GK+T    + + L+  +        P  +    E     LL  G     
Sbjct: 1   MFVVFEGLDKSGKSTTCDSVYKKLKELDIHTTQMHFPDRSSITGEILNKYLL--GKVNLT 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EA  ++F+A R    +N I      G ILLCDR+  S   +   +       +++ + +
Sbjct: 59  NEATHLLFSADRYQ-KKNFIEKTSRSG-ILLCDRYSWSGICFSHAKGIDLGWAVETERLL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                 PD T  L+  V++ +KR         +   +  E +      K  + +L + R+
Sbjct: 117 ----PKPDITFFLEADVNVLMKR--------HNWGDEILETR--EFQLKAAEAYLQM-RD 161

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                  +D+  S   +   +++ + +  +++
Sbjct: 162 YVKNLIKIDATKSVAEITDIVVDTIIKFQKRQ 193


>gi|216263713|ref|ZP_03435708.1| thymidylate kinase [Borrelia afzelii ACA-1]
 gi|215980557|gb|EEC21378.1| thymidylate kinase [Borrelia afzelii ACA-1]
          Length = 202

 Score =  115 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I+ LK   + ++   + T+EP      E  +  L++         
Sbjct: 8   FYCIEGIDGSGKTSIINKLKTICKNESR-YYFTKEPSSGIIGEMIKEQLMNFKN-PLKES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L      ++ DR+L SS AYQG+             E
Sbjct: 66  TFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    +     I  +R+Q   +       D FE +     E+    +L   +
Sbjct: 116 LNKNFPLPEKVFFIKTDPKIAYERIQKNRT-----QSDLFELEKYKTFEQITLKYLKTFK 170

Query: 183 NQPDRCHI--VDSA--HSFQSVATNILNIVW 209
                 ++  +D++   +    A  I N++ 
Sbjct: 171 KIEKTINVIYIDNSIKDNLDKNAEKIFNLIK 201


>gi|302685604|ref|XP_003032482.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
 gi|300106176|gb|EFI97579.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8]
          Length = 221

 Score =  115 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 63/223 (28%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG++ +GK+T  + LK  L      V + + P  T A        L   ++ 
Sbjct: 3   TRGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNIE- 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER------------ 109
                  ++++A R + + + I   L EG  ++CDR+  S  A+   +            
Sbjct: 62  MDDHVVHLLYSANRWE-LASRISTLLTEGTTIICDRYAFSGIAFSASKVASTSASTTVTS 120

Query: 110 ---------------------------------------DSSQHLFLDSLQEISVQEVMP 130
                                                  D+S  L     +   +    P
Sbjct: 121 TSSSTSTTAAPPTSTGSSTCGSSPTPAKTKDTCPTAKTTDTSPLLPYAWCRAPDIGLPAP 180

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           D T+  D+  +    R             + +ER+DV    + 
Sbjct: 181 DVTLFFDIAPEAARAR--------GGYGEERYEREDV--QRRV 213


>gi|111115628|ref|YP_710246.1| thymidylate kinase [Borrelia afzelii PKo]
 gi|110890902|gb|ABH02070.1| thymidylate kinase [Borrelia afzelii PKo]
          Length = 202

 Score =  115 bits (290), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 24/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I+ LK   + ++   + T+EP      E  +  L++         
Sbjct: 8   FYCIEGIDGSGKTSIINKLKTICKNESR-YYFTKEPSSGIIGEMIKEQLMNFKN-PLKES 65

Query: 66  AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A ++AA R DH+     I   L      ++ DR+L SS AYQG+             E
Sbjct: 66  IFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGKLG----------YE 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++    +P+    + +   I  +R+Q   +       D FE +     E+    +L   +
Sbjct: 116 LNKNFPLPEKVFFIKIDPKIAYERIQKNRT-----QSDLFELEKYKTFEQITLKYLKTFK 170

Query: 183 NQPDRCHI--VDSA--HSFQSVATNILNIVW 209
                 ++  +D++   +    A  I N++ 
Sbjct: 171 KIEKTINVIYIDNSIKDNLDKNAEKIFNLIK 201


>gi|11875610|gb|AAG40728.1|AF272669_1 thymidine kinase [Shrimp white spot syndrome virus]
 gi|15021563|gb|AAK77840.1|AF369029_171 ORF171, putative chimeric thymidine kinase - thymidylate kinase
           [shrimp white spot syndrome virus]
 gi|19482046|gb|AAL89322.1| WSSV454 [shrimp white spot syndrome virus]
          Length = 388

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 16/210 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +  EG +  GK+T   LL        Y       P  +       +  L+  ++     
Sbjct: 194 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIE-LDDH 252

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A  ++F+A R + V + I+  L +G  ++ DR+  S   +   R       ++       
Sbjct: 253 AAHLLFSANRWE-VCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVD---TVEWCSASDE 308

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA-RNQ 184
               P         + + +     + S R++  ++ FE     I E+ R +FLD+A +++
Sbjct: 309 GLPQP--------DLVLLMLLDVEKCSNRDTFGVERFE--TNSIQERARALFLDLANKDE 358

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +    VD+  + + V T I+NIV+ +V++
Sbjct: 359 KNVWIKVDARGTIEEVQTKIINIVYNIVEE 388


>gi|167042320|gb|ABZ07049.1| putative Thymidylate kinase [uncultured marine crenarchaeote
           HF4000_ANIW97J3]
          Length = 292

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 20/209 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFG 63
           L I+ EG++ AGK T   +L + L+R      V   P   T   +  ++ L   G   F 
Sbjct: 101 LIIAIEGLDQAGKKTQTEMLVKALRRIKIKTAVFSFPDYSTIIGKEIKNHL--SGKRNFP 158

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E    ++AA RL+ +E  I+ A  +  +L+ +R+  S+  Y G  +  +  +L  L+E 
Sbjct: 159 PEIIHYLYAANRLEKLEE-IQKASSKNSVLVMNRYYHSNLVY-GIANGLKEKWLQKLEE- 215

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                  D  I+LD   D    R +++         D FE+ +    +K  +I+  +A+ 
Sbjct: 216 --GLPKADLVIVLDASQDDSFSRKKSKR--------DRFEK-NKNFSKKISRIYRRLAKK 264

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              R  +V S+ + Q+    I+ I+ + +
Sbjct: 265 H--RWKMV-SSDTKQNTHKEIMKIISKKI 290


>gi|15827333|ref|NP_301596.1| thymidylate kinase [Mycobacterium leprae TN]
 gi|221229811|ref|YP_002503227.1| thymidylate kinase [Mycobacterium leprae Br4923]
 gi|13092882|emb|CAC30281.1| putative thymidylate kinase [Mycobacterium leprae]
 gi|219932918|emb|CAR70866.1| putative thymidylate kinase [Mycobacterium leprae Br4923]
          Length = 210

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 11/199 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVDEF- 62
           + I+ EG++GAGK T    L++  +     V     P      A       L     +  
Sbjct: 1   MLIAIEGVDGAGKRTLSEELRQAFEATGKSVATLAFPRYRQSVAADIAAEALHGQHGDLA 60

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
               A A++FA  R   VE+ I        I++ DR++ S+ AY   R         +  
Sbjct: 61  SSVYAMALLFAFDRAGAVED-IEALDRNHDIVILDRYVASNAAYSAARLHEDCSGRAVAW 119

Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +Q I  Q +    PD  ++L + V++  KR + R         D +ER D  + ++   +
Sbjct: 120 VQRIEYQRLRLPSPDWQVLLAVSVELAGKRSRYRARTDPDRLRDSYER-DDGLQQRTGAV 178

Query: 177 FLDIARNQ-PDRCHIVDSA 194
           +  +A      R  +VD+ 
Sbjct: 179 YAGLAAADWGGRWLVVDAD 197


>gi|157865253|ref|XP_001681334.1| thymidylate kinase-like protein [Leishmania major]
 gi|68124630|emb|CAJ02337.1| thymidylate kinase-like protein [Leishmania major strain Friedlin]
          Length = 363

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 82/219 (37%), Gaps = 19/219 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVL--LSCGVDEFG 63
           I  EG +GAGK T   LL R +     +VH    P          R VL      + E  
Sbjct: 141 IVVEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGKKGPISELN 200

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121
            +  + +++  R       +   L  G  ++ DR+  +++ +Q  +     +  F+  L+
Sbjct: 201 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 259

Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +    +        + LDLP  + L+ ++   + +    LD  E       E+ RQ + 
Sbjct: 260 FMEVEWLGLPRATYVLYLDLPPAVALEAMRQDATRK---QLDIHETAGSDYKERVRQTYR 316

Query: 179 DIARNQPDRCHIV-----DSAH-SFQSVATNILNIVWEL 211
               + P   H +     D    + + V  +I + + + 
Sbjct: 317 WCCEHLPG-WHHIECFSDDGRRLTREEVHASITSHLRDA 354


>gi|17158497|ref|NP_477917.1| wsv395 [Shrimp white spot syndrome virus]
 gi|17016791|gb|AAL33397.1| wsv395 [shrimp white spot syndrome virus]
          Length = 398

 Score =  115 bits (289), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 16/210 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +  EG +  GK+T   LL        Y       P  +       +  L+  ++     
Sbjct: 204 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIE-LDDH 262

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A  ++F+A R + V + I+  L +G  ++ DR+  S   +   R       ++       
Sbjct: 263 AAHLLFSANRWE-VCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVD---TVEWCSASDE 318

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA-RNQ 184
               P         + + +     + S R++  ++ FE     I E+ R +FLD+A +++
Sbjct: 319 GLPQP--------DLVLLMLLDVEKCSNRDTFGVERFE--TNSIQERARALFLDLANKDE 368

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +    VD+  + + V T I+NIV+ +V++
Sbjct: 369 KNVWIKVDARGTIEEVQTKIINIVYNIVEE 398


>gi|68486049|ref|XP_713041.1| hypothetical protein CaO19.8730 [Candida albicans SC5314]
 gi|68486114|ref|XP_713007.1| hypothetical protein CaO19.1137 [Candida albicans SC5314]
 gi|46434470|gb|EAK93878.1| hypothetical protein CaO19.1137 [Candida albicans SC5314]
 gi|46434509|gb|EAK93916.1| hypothetical protein CaO19.8730 [Candida albicans SC5314]
 gi|238878423|gb|EEQ42061.1| thymidylate kinase [Candida albicans WO-1]
          Length = 224

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 83/227 (36%), Gaps = 37/227 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           M  G  I  EG++ +GK+T  S+L   L        + + P   TP  +     L +   
Sbjct: 1   MARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSF 56

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117
                +A  ++F+A R + +   I+  L +G  ++ DR++ S  AY   ++      +  
Sbjct: 57  T-LSDQAAHLLFSANRWE-LSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQ 114

Query: 118 ----DSLQEISVQEVMPDCTIILDLPVDIGL---------KRVQNRYSLRESACLDYFER 164
                 L  I       D    L L  D GL                S R+    + +E 
Sbjct: 115 GKNKQQLNNI-------D---WL-LSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYEL 163

Query: 165 KDVMIHEKRRQIFLDIARNQPD-RCHIVD-SAHSFQSVATNILNIVW 209
           +      K +Q FL+I     D    IVD    +   V T +  I+ 
Sbjct: 164 Q--QFQAKVKQCFLEILDTNKDPTIRIVDVGGKTIDQVTTQLWEIIE 208


>gi|262038965|ref|ZP_06012303.1| dTMP kinase [Leptotrichia goodfellowii F0264]
 gi|261747019|gb|EEY34520.1| dTMP kinase [Leptotrichia goodfellowii F0264]
          Length = 156

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 12/154 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-QRKNYD-VHVTREPGGTPAAEAARHVLLSCG--- 58
           G  I  EG +G+GK T   L+ + L + K  + +     P     A     + L+     
Sbjct: 2   GKLIIIEGTDGSGKQTQTELIYKRLCELKGKEKIKKISFPNYESKASEPVKMYLAGEFGK 61

Query: 59  -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQH 114
            VD   A A ++ ++  R    +         G I++ DR+  S+  +Q  +      + 
Sbjct: 62  RVDSVNAYAASLFYSVDRYASFKKDWEDFYNNGGIIVSDRYTTSNMVHQAPKIGNEKERE 121

Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLK 145
            +L+ L ++    +    PD    LD+P +   K
Sbjct: 122 KYLEWLVDLEWEKMPIPEPDLVFFLDVPFEFSQK 155


>gi|15078963|ref|NP_149714.1| 251L [Invertebrate iridescent virus 6]
 gi|82012170|sp|Q91FS1|KTHY_IIV6 RecName: Full=Putative thymidylate kinase 251L; AltName: Full=dTMP
           kinase
 gi|15042332|gb|AAK82112.1|AF303741_251 251L [Invertebrate iridescent virus 6]
          Length = 213

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 18/210 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I FEG +  GK+T   LL   L++KN +V +   P  T          L   +  
Sbjct: 12  TRGLLIVFEGCDKTGKSTQCKLLFEELKQKNIEVRMINFPNRTTQTGKLIDQYLKGKIY- 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   I+F+  R + + + I+  ++ G  ++ DR+  S  A+   +     L     +
Sbjct: 71  LSDEDIHILFSKNRWE-IIDTIKTNILNGITVIIDRYSYSGIAFSVAKG----LDFQWCK 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD  I L      G        + R     + +ER  + I +K ++ +  + 
Sbjct: 126 QTENGLLKPDIIIYL-----TGQ---TKNMASRNGYGSEIYER--IEIQDKVKKCYEKMI 175

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +    + +++      +   I  I+ + 
Sbjct: 176 --EIPLWNKINADQDVLIIKKQIETIIQKF 203


>gi|228905402|ref|ZP_04069357.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
 gi|228854222|gb|EEM98925.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
          Length = 328

 Score =  115 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 21/222 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
             I+ EGI+G+GKT  +SLL++ L+ K+ +V +   P             LS   +    
Sbjct: 109 KIIAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLSGNEEVNAN 168

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
               ++ ++ +A  R    +       +    LL +RF  SS  YQ  R     +  F+ 
Sbjct: 169 NVDPKSMSLWYALDRW---KEFENSNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQ 225

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRR 174
            + E+    +    PD  I+ DL  +   K V N+          D +E +   I    R
Sbjct: 226 WIFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADVYE-ESADIMSNAR 284

Query: 175 QIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWE 210
            I+ D+A+   +   I++         + + +   ++ ++ +
Sbjct: 285 GIYQDLAKKY-NNIVIINCLDENNKMKTPEEINQIVMKVIED 325


>gi|218906650|ref|YP_002454484.1| thymidylate kinase, putative [Bacillus cereus AH820]
 gi|218535113|gb|ACK87511.1| thymidylate kinase, putative [Bacillus cereus AH820]
          Length = 328

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 21/222 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60
             I+ EGI+G+GKT  +SLL+  L+ K+  V +   P             LS   +    
Sbjct: 109 KIIAVEGIDGSGKTVQMSLLEEQLKEKDKQVIIKSFPVYDSFFGKNIGQFLSGNEEVNAN 168

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
               ++ ++ +A  R    +       +    LL +RF  SS  YQ  R     +  F+ 
Sbjct: 169 NVDPKSMSLWYALDRW---KEFENFNYINYDYLLLNRFTLSSAVYQSSRVEPELREEFIQ 225

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRR 174
            + E+    +    PD  I+ DL  +   K V N+          D +E +   I    R
Sbjct: 226 WIFELEHSQLGLPSPDLYIVFDLNAETSKKNVSNKGFRDYVGEKADVYE-ESADIMSNAR 284

Query: 175 QIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWE 210
            I+ D+A+   +   I++         + + +   ++ ++ +
Sbjct: 285 GIYQDLAKKY-NNIVIINCLDENNKMKTPEEINQIVMKVIED 325


>gi|260577914|ref|ZP_05845844.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734]
 gi|258603934|gb|EEW17181.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734]
          Length = 216

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 15/218 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62
           + +SFEG++GAGK T ++ +++ L  +   V     P    +  A  AR  L     D  
Sbjct: 1   MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60

Query: 63  GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117
            +    A +FA  R + +   +     +G ++L DR+  S+ AY   R          ++
Sbjct: 61  HSVHGMATLFALDRAE-IGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGEWV 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L++  +    PD  I++D+  ++  +R ++R +  ++   D +ER D  + E+    +
Sbjct: 120 TQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVCAY 178

Query: 178 LDIARNQ---PDRCHIVDSAH-SFQSVATNILNIVWEL 211
             +A  Q   P     VDS    +++ A  + +++ E+
Sbjct: 179 RALAEQQWLSP--WVTVDSTGDDYEARAAKVADLLEEM 214


>gi|146078976|ref|XP_001463654.1| thymidylate kinase-like protein [Leishmania infantum JPCM5]
 gi|134067741|emb|CAM66020.1| thymidylate kinase-like protein [Leishmania infantum JPCM5]
 gi|322497056|emb|CBZ32126.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 363

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 19/219 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63
           I  EG +GAGK T   LL R +     +VH    P            +LS     + E  
Sbjct: 141 IVIEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGRKGSISELN 200

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121
            +  + +++  R       +   L  G  ++ DR+  +++ +Q  +     +  F+  L+
Sbjct: 201 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 259

Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +    +        + LDLP    L+    R S R+   LD  E       E+ RQ + 
Sbjct: 260 FMEVEWLGLPRATYVLYLDLPPAAALE-AMRRDSTRKQ--LDIHETAGSDYKERVRQTYR 316

Query: 179 DIARNQPDRCHIV-----DSAH-SFQSVATNILNIVWEL 211
               + P   H +     D    + + V  +I + + + 
Sbjct: 317 WCCEHLPG-WHHIECFDDDGRRLTREEVHASITSHLRDA 354


>gi|203288221|ref|YP_002223236.1| thymidylate kinase [Borrelia recurrentis A1]
 gi|201085441|gb|ACH95015.1| thymidylate kinase [Borrelia recurrentis A1]
          Length = 202

 Score =  114 bits (287), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 26/212 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L++    K    H T+EP      +  R  L +         
Sbjct: 8   FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFKN-PLRKV 65

Query: 66  AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + A ++ A R +H+ N+   I   L + +  ++ DR+L SS AYQGE             
Sbjct: 66  SLAHLYVADRYEHLYNIQNGIITILNKNQTKVISDRYLFSSIAYQGELG----------Y 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++    +P+    +    +I  KR+Q   +       D FE ++    E     ++++ 
Sbjct: 116 KLNKDFPLPEKLFFIKTDPNIAFKRIQKNRT-----QADIFEFEEAKFKE-INSRYMEMF 169

Query: 182 RNQPDRCHIVD----SAHSFQSVATNILNIVW 209
           +       IV     S H  +  A  I +++ 
Sbjct: 170 QIFNQLIDIVYIENSSEHDLEISARKIFDLIK 201


>gi|322489068|emb|CBZ24317.1| thymidylate kinase-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 362

 Score =  114 bits (287), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 88/227 (38%), Gaps = 19/227 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---VDEFG 63
           I  EG +GAGK T   LL R +     +VH    P            LLS     + E  
Sbjct: 140 IVIEGGDGAGKETQTGLLVRRVHAAGDEVHSLDFPNEKALYGGLVRALLSGKKGSISELD 199

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121
            +  + +++  R       +   L  G  ++ DR+  +++ +Q  +     +  F+  L+
Sbjct: 200 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 258

Query: 122 EISVQEV-MPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + V+ + +P  T  + LDLP    L+    R + R+   LD  E       E+ RQ + 
Sbjct: 259 FMEVEWLGLPRATSVLYLDLPPAAALE-AMRRDAARKQ--LDIHETAGSDYKERVRQTYR 315

Query: 179 DIARNQPDRCHIVDS------AHSFQSVATNILNIVWELVQKRVSPL 219
               + P   H +D         + + V  +I + +     + +  L
Sbjct: 316 WCCEHLPG-WHHIDCFGDGGRRLTREEVHGSITSHLRNAGSRAIGAL 361


>gi|68536724|ref|YP_251429.1| thymidylate kinase [Corynebacterium jeikeium K411]
 gi|68264323|emb|CAI37811.1| tmk [Corynebacterium jeikeium K411]
          Length = 216

 Score =  114 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 15/218 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62
           + +SFEG++GAGK T ++ +++ L  +   V     P    +  A  AR  L     D  
Sbjct: 1   MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60

Query: 63  GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117
            +    A +FA  R + +   +     +G ++L DR+  S+ AY   R          ++
Sbjct: 61  HSVHGMAALFALDRAE-IGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGEWV 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L++  +    PD  I++D+  ++  +R ++R +  ++   D +ER D  + E+    +
Sbjct: 120 TQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVCAY 178

Query: 178 LDIARNQ---PDRCHIVDSAH-SFQSVATNILNIVWEL 211
             +A  Q   P     VDS    +++ A  + +++ E+
Sbjct: 179 RALAEQQWLSP--WVTVDSTGDDYEARAAKVADLLEEM 214


>gi|291531126|emb|CBK96711.1| thymidylate kinase [Eubacterium siraeum 70/3]
          Length = 222

 Score =  114 bits (286), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 21/219 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----V 59
           G     EG++G GK+T + +LK      + ++     P    A+       LS       
Sbjct: 9   GKLFVIEGLDGCGKSTQLEMLKA---SADSNIRFISFPNYNSASGEIIKDYLSGKFCEEN 65

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFL 117
              GA      +A  R    +         GK ++  R+  S+  YQ  +        +L
Sbjct: 66  GRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKSQWDEYL 125

Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + L++    +     P+  + LD+PV++  K +  RY   E A  D  E  +V   +  R
Sbjct: 126 EWLEDYEYDKFAIPRPERIVFLDMPVEVSQKLLSARYGGDE-AKKDIHES-NVAFLKACR 183

Query: 175 QIFLDIARNQPDRCHIV---DSAHS--FQSVATNILNIV 208
           +    +        +I+   D  +    + +   +  ++
Sbjct: 184 ET--ALYTADKKGWYILPCSDGENPYTPEKINKELSALI 220


>gi|203284688|ref|YP_002222428.1| thymidylate kinase [Borrelia duttonii Ly]
 gi|201084131|gb|ACH93722.1| thymidylate kinase [Borrelia duttonii Ly]
          Length = 202

 Score =  114 bits (286), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 26/212 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L++    K    H T+EP      +  R  L +         
Sbjct: 8   FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFKN-PLRKV 65

Query: 66  AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + A ++ A R +H+ N+   I   L + +  ++ DR+L SS AYQGE             
Sbjct: 66  SLAHLYVADRYEHLYNIQNGIIAILNKNQTKVISDRYLFSSIAYQGELG----------Y 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++    +P+    +    +I  KR+Q   +       D FE ++    E     ++++ 
Sbjct: 116 KLNKDFPLPEKLFFIKTDPNIAFKRIQKNRT-----QADLFEFEEAKFKE-INSRYMEMF 169

Query: 182 RNQPDRCHIVD----SAHSFQSVATNILNIVW 209
           +       IV     S H  +  A  I +++ 
Sbjct: 170 QIFNQLIDIVYIENSSEHDLEISARKIFDLIK 201


>gi|167753463|ref|ZP_02425590.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216]
 gi|167658088|gb|EDS02218.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216]
          Length = 225

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 88/226 (38%), Gaps = 21/226 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLS--CGVD 60
           + I  EG++GAGK+T + L++R   ++  + H    P        E     L      VD
Sbjct: 1   MLIVLEGLDGAGKSTQVELVRRMFAQEGVESHFLHFPRFDAPVYGELIARFLRGELGAVD 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114
           +      A++FA  R D    + R  L  G  ++ DR++ S+  +Q      G+R     
Sbjct: 61  KVDPYLVALLFAGDRADAAAQL-RCWLDAGHAVVLDRYVYSNVGFQCAKLPAGDRQEELR 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDY-FERKDVMIHE 171
            ++  L+        PD ++ LD+P     K++        RE    +       + +  
Sbjct: 120 RWILDLEFGYYGIPRPDVSLFLDVPFAFTEKKLSEVREGDDREYLKGERDIHEASLDLQR 179

Query: 172 KRRQIFLDIARNQPDRCHIVDSA------HSFQSVATNILNIVWEL 211
           + R+++   A    DR  I+D +       S  ++   I   +   
Sbjct: 180 RVREVYRAAAAAD-DRLRIIDCSDAQGGMDSPNAIFARIRTEIERF 224


>gi|258611590|ref|ZP_05233832.2| thymidylate kinase [Listeria monocytogenes FSL N3-165]
 gi|258601555|gb|EEW14880.1| thymidylate kinase [Listeria monocytogenes FSL N3-165]
          Length = 111

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           +DSS AYQG         +  +   ++++ +PD T  LD+P ++GL R+       +   
Sbjct: 1   MDSSLAYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGRE 56

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           ++  +++D+  HEK +  +  +    P+R   VD+  + + +   IL  +   +
Sbjct: 57  VNRLDKEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQL 110


>gi|257057529|ref|YP_003135361.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
 gi|256587401|gb|ACU98534.1| thymidylate kinase [Saccharomonospora viridis DSM 43017]
          Length = 642

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 20/223 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +GL I  EG   A      + L ++L   +  V +  +P    A +  R   L  G    
Sbjct: 439 NGLLIVLEGTTAADTAAQAAHLAQWLGSGSQRVVLAADP----ALDDERLTSLMSGAALT 494

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           GA A+A+  AA R D VE  +RPAL EG I++ +RF+D+  A+           L+ L +
Sbjct: 495 GARAKALAAAAVRADIVERNVRPALDEGAIVVMERFVDTPLAHLSAMAGLDATELEGLTD 554

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +   + PD T++LD       ++  +                    H + ++I  ++A 
Sbjct: 555 WATGALRPDLTVLLDADPGEASEQSTS----------------TAEHHWRVQEILAEMAA 598

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           + PDR  +VD+  +   VA  +   V E +  +V+   + +++
Sbjct: 599 SAPDRYVVVDAEGTEAEVAERVRVSVSEALSGKVALPPTTQEV 641


>gi|300857934|ref|YP_003782917.1| thymidylate kinase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685388|gb|ADK28310.1| Thymidylate kinase [Corynebacterium pseudotuberculosis FRC41]
 gi|302205663|gb|ADL10005.1| thymidylate kinase [Corynebacterium pseudotuberculosis C231]
 gi|302330214|gb|ADL20408.1| thymidylate kinase [Corynebacterium pseudotuberculosis 1002]
          Length = 206

 Score =  113 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 7/207 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGK T +  L   L  +       R      A  A + +    G      
Sbjct: 1   MIIAIEGIDGAGKNTLVRALVEKLDARVLG--FPRYQDSIHAHLAQKALYQEMGDVSDSI 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122
            A A++FA  R + +   +R       ++L DR++ S+ AY   R  D +   ++  L+ 
Sbjct: 59  YAMALLFALDRRE-IAEELRSYKGSEDVILLDRYVSSNAAYSAARAQDWNLVAWVSHLEF 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD  ++L+   ++  +R   R    +    D +E  D  +  +    +  +A 
Sbjct: 118 EEFGLPTPDIQVLLNTSPEVAAQRAAKREEQDQDRSRDCYE-TDSSLQVRTSDAYARLAE 176

Query: 183 NQP-DRCHIVDSAHSFQSVATNILNIV 208
            +      +     S   VA  I+  +
Sbjct: 177 EKRFSPWIVAQPGDSVDDVALKIIQTL 203


>gi|321456428|gb|EFX67536.1| hypothetical protein DAPPUDRAFT_63855 [Daphnia pulex]
          Length = 195

 Score =  113 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 19/191 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +  G  I  E  + +GK T    +K  +LQ  N + H+ R P      + A    +    
Sbjct: 2   IKRGALIVLERCDRSGKPTQCQKVKHLWLQESNKEAHLMRFPDEIVCDQPAISSYICYAK 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            + G   E  +F +ARL  +   I+  L +G  ++ DR+  S  A+   +    ++ L  
Sbjct: 62  PKDGTATE--LFTSARLLSIRPDIKKLLQKGTNVIVDRYSYSGIAFSAAK---PNMDLRW 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            Q+     + PD  I LD+               R     + +E  ++ + +  R  +L 
Sbjct: 117 CQQSDSGLLKPDLVIFLDIDPVEA--------ETRGQYGSERYE--NLEMQKVVRSNYLK 166

Query: 180 IARNQPDRCHI 190
           +   Q +   +
Sbjct: 167 L---QDESWRV 174


>gi|227505511|ref|ZP_03935560.1| thymidylate kinase [Corynebacterium striatum ATCC 6940]
 gi|227197875|gb|EEI77923.1| thymidylate kinase [Corynebacterium striatum ATCC 6940]
          Length = 204

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T +  +K+ L  +   +   R      A  A   +    G     A
Sbjct: 1   MLISIEGIDGAGKNTLVQRIKKELSVEVNVLGFPRYEESVHAQLAQDALYGRMGDLTDSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +FA  RL   +  +  A     +L+ DR++ S+ AY   R  +    +D + ++ 
Sbjct: 61  FAMATLFALDRLG-AKERLLAAQESKDLLILDRYVASNAAYSAARLGTD-EVIDWVFDLE 118

Query: 125 VQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   P   I LD  V++   R  +R     +   D +E+ D  +       +  +A
Sbjct: 119 FGRFGLPKPQLQIFLDTDVELAAARATSRAEEDSTRVRDRYEK-DSTLQANTAAAYRRLA 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             +     I  +      +  ++  +V E
Sbjct: 178 ERKWGGQWI--ATADTDMIVQSVKKLVEE 204


>gi|315918331|ref|ZP_07914571.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692206|gb|EFS29041.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 226

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 29/231 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57
           N G  I  EG + +GK T   LL                P     A     + L+     
Sbjct: 4   NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGL 63

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH-- 114
             ++      + ++A  R    +        + + + + DR++ S+  +Q  +   +   
Sbjct: 64  NAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKE 123

Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              ++L++L+    +   PDC I LD+P     + ++ R +            ++  IHE
Sbjct: 124 EYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHE 176

Query: 172 KRRQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211
           + R+ +L        ++A      R   VD     S Q +   IL  V E+
Sbjct: 177 RNRE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 226


>gi|300932844|ref|ZP_07148100.1| thymidylate kinase [Corynebacterium resistens DSM 45100]
          Length = 220

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 10/218 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62
           + I+FEG++GAGK T +S ++  L  +   V     P    +  A+ A+  L     D  
Sbjct: 1   MIIAFEGVDGAGKNTLVSAVEAELLAREIPVARVGFPRYEQSVHAQLAQAALYGQMGDLL 60

Query: 63  GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
            +    A +FA  R + V   +     +G ++L DRF+ S+ AY   R  S     ++  
Sbjct: 61  DSIHGMATMFALDRAE-VAEDLASFSEDGYVVLLDRFVASNAAYSTARLGSDSVADWVYG 119

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+  S+   +PD  +++D+   +  +RV +R     S   D +E  D  +       + D
Sbjct: 120 LEFDSLGSPLPDLQVLVDVDATVAQQRVAHRADEDSSRAQDRYEA-DSQLQVDTVAAYRD 178

Query: 180 IARNQ-PDRCHIV--DSAHSFQSVATNILNIVWELVQK 214
           +A         ++  D     +  A  +++ +   +  
Sbjct: 179 LAARNWASEWLVMNFDHGADVKQCAQQVVDTIVATLAD 216


>gi|288919199|ref|ZP_06413537.1| thymidylate kinase [Frankia sp. EUN1f]
 gi|288349446|gb|EFC83685.1| thymidylate kinase [Frankia sp. EUN1f]
          Length = 223

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 16/191 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVLLSCGVDEF 62
           + ++ EG++GAGK T  S L   L            P  T  P   A R +L   G +  
Sbjct: 1   MIVAIEGVDGAGKHTLTSRLVEALTAAGRTAATFSFPRYTAGPLGTAVRAML--DGDERL 58

Query: 63  -----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSS 112
                 A A A++FA  R + +  +   A  E  +LL DR+L S+ AY   R        
Sbjct: 59  AGVAGSARATALLFALDRANALPELAARA-AEHDVLLVDRYLASNAAYGAARLPADERPD 117

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
              ++  L+  +++   PD  ++LD+PV+      + R +   +  LD FER D  + E+
Sbjct: 118 FLAWIAELELTALRLPRPDLQVLLDVPVETARAAARQRAAGDATRALDTFER-DEGLQER 176

Query: 173 RRQIFLDIARN 183
              I+  +A +
Sbjct: 177 CAGIYRHLAAD 187


>gi|3493131|gb|AAC33288.1| thymidylate kinase [Arabidopsis thaliana]
          Length = 188

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 65/170 (38%), Gaps = 16/170 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++ +GK+T  + L  FL    +   + R P    +        LS    +       ++
Sbjct: 2   GLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQLDDHTIHLL 60

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  +   +  + P
Sbjct: 61  FSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKAPEIGLLAP 115

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           D  + LD+  +   +R             + +ER  V   +K    +  +
Sbjct: 116 DSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTL 155


>gi|227832501|ref|YP_002834208.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183633|ref|ZP_06043054.1| thymidylate kinase [Corynebacterium aurimucosum ATCC 700975]
 gi|227453517|gb|ACP32270.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975]
          Length = 206

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 80/216 (37%), Gaps = 15/216 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T    L+  L      +   R      A  A   +    G      
Sbjct: 1   MLISIEGIDGAGKNTITQRLREELACDVEVLSFPRYEDSIHAQLAQEALYGRMGDLTDSV 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A +FA  R    E ++  A     +L+ DR++ S+ AY         L +D + E+ 
Sbjct: 61  YGMATLFALDRRGAKEQLLAAAESTDSLLILDRYVASNAAYSSA-RVGGELIVDWIYELE 119

Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                  +P   I LD  V +  +R   R +  E    D +ER D  +  +    +  +A
Sbjct: 120 FERFGLPVPQLQIFLDTDVALAGQRAVARAAEDEGRNRDRYER-DAALQSRTAAAYRRLA 178

Query: 182 RNQ--PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             Q         D+          I+  V ELV ++
Sbjct: 179 EQQWAGQWIATADADM--------IIQAVKELVGEQ 206


>gi|39939007|ref|NP_950773.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|39722116|dbj|BAD04606.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 204

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 21/215 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEGI+G+GKT+ I  L+  L+       + +  G +   +  R + L+    +   
Sbjct: 3   KLIVFEGIDGSGKTSLIHALQPLLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE----RDSSQHLFLDSL 120
                +  A        + +      ++++ DR+L S+YAYQ           +L L  +
Sbjct: 58  LTRFYLSLANMAQIQVELFK----NKQLIILDRWLPSTYAYQLFPFFKEKKLTNLPLKQI 113

Query: 121 QEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             I+ + +   PD  I L++   IG  R + + S +     D  ERK +   +   Q + 
Sbjct: 114 FNINHETILKKPDLLIYLEIDPQIGKTRKKKQKSHQR----DLIERKSLTYFQTVCQGYK 169

Query: 179 DIARNQPDRCH--IVDSAHSFQSVATNILNIVWEL 211
               +        I++      S    I+  + E+
Sbjct: 170 HYLTHYTRDIKQLILNGTDHIPSNIQKIMKYLGEI 204


>gi|226468432|emb|CAX69893.1| deoxythymidylate kinase (thymidylate kinase) [Schistosoma
           japonicum]
          Length = 238

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 32/236 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           + G+F+  EG +  GKTT  SLL + L    +   + V      TP        L   G 
Sbjct: 6   SRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYL--GGN 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +  + A  ++F A R +     IR A+  G  ++ DR++ S  AY   +      + + 
Sbjct: 64  GDINSHALHLLFTANRWEKQSE-IRNAISNGISVVADRYIYSGIAYTAAKLPPTPNW-EW 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             E+    +  D  I L    +       +  + R     + +E+      ++  + ++ 
Sbjct: 122 CCEMEKGLLEADLVICL--TPENL-----DELNSRNGYGNECYEK--DDFQKRVLENYVR 172

Query: 180 IARN----QPDR------------CHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218
           +++       +              H + +   + + V   I+ +V   ++    P
Sbjct: 173 LSKEVELDNSEWQNNDETGDSVGLWHFIQATNKTVEEVHKCIMVLVKSKLESISGP 228


>gi|291009673|ref|ZP_06567646.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338]
          Length = 214

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 13/197 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVD- 60
           G  I  EG++GAGK T    L   L R+   V     P       AE     L     D 
Sbjct: 2   GRLIVIEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAELVAEALRGGHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118
                  A+++A  R     + +R  L    ++L DR++ S+ AY   R        F+ 
Sbjct: 62  GDSVHGMAVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDFVA 120

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             +E+ ++      PD  ++L +P ++   R  +R         D FE  D  + E+  +
Sbjct: 121 WTEELEIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFES-DASLQERCGE 179

Query: 176 IFLDIARNQ---PDRCH 189
           ++  +A      P R  
Sbjct: 180 VYAQLAERNWWSPWRVV 196


>gi|257467201|ref|ZP_05631512.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 222

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 29/229 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL                P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGLNA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH---- 114
           ++      + ++A  R    +        + + + + DR++ S+  +Q  +   +     
Sbjct: 62  EKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKEEY 121

Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            ++L++L+    +   PDC I LD+P     + ++ R +            ++  IHE+ 
Sbjct: 122 LIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHERN 174

Query: 174 RQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211
           R+ +L        ++A      R   VD     S Q +   IL  V E+
Sbjct: 175 RE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 222


>gi|4974|emb|CAA46698.1| thymidylate kinase [Schizosaccharomyces pombe]
          Length = 210

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 79/212 (37%), Gaps = 23/212 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVD 60
           N G  I  EG++ +GK+T   LL   L      + + + P  T    +     L      
Sbjct: 5   NRGRLIVIEGLDRSGKSTQCQLLVDKLILNMKRLKLFKFPDRTTAIGKKIDDYL--TESV 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +   ++F+A R +   ++   A  +    + DR+  S  A+   +     L  +  
Sbjct: 63  QLNDQVIHLLFSANRWE--PSIYYRANQQRCNCILDRYAFSGIAFSAAKG----LDWEWC 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L++   I   R             + +E+  + + EK  +    +
Sbjct: 117 KSPDRGLTRPDLVIFLNVDPRIAATR--------GQYGEERYEK--IEMQEKVLKNLQRL 166

Query: 181 ARNQPD---RCHIVDSAH-SFQSVATNILNIV 208
            +   +       +D++  + + V + I+++V
Sbjct: 167 QKEFREEGLEFITLDASSYALEDVDSQIVDLV 198


>gi|241950051|ref|XP_002417748.1| dTMP kinase, putative; thymidylate kinase, putative [Candida
           dubliniensis CD36]
 gi|223641086|emb|CAX45461.1| dTMP kinase, putative [Candida dubliniensis CD36]
          Length = 224

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 87/239 (36%), Gaps = 42/239 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           M  G  I  EG++ +GK+T  S+L   L        + + P   TP  +     L +   
Sbjct: 1   MARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSF 56

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117
                ++  ++F+A R + +   I+  L +G  ++ DR++ S  AY   ++      +  
Sbjct: 57  T-LSDQSAHLLFSANRWE-LSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQ 114

Query: 118 ----DSLQEISVQEVMPDCTIILDLPVDIGL---------KRVQNRYSLRESACLDYFER 164
                 L  +       D    L L  D GL                S R+    + +E 
Sbjct: 115 GKNKQQLNNV-------D---WL-LSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYEL 163

Query: 165 KDVMIHEKRRQIFLDIARNQPD-RCHIVD-SAHSFQSVATNILNIVW-----ELVQKRV 216
           +      K +Q FL+I     D    IVD    +   V T +  I+      EL+   +
Sbjct: 164 Q--QFQAKVKQCFLEILDTNDDPTIRIVDVGGKTIDQVTTQLWEIIETNKNHELINDAI 220


>gi|284992962|ref|YP_003411516.1| major facilitator superfamily protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284066207|gb|ADB77145.1| major facilitator superfamily MFS_1 [Geodermatophilus obscurus DSM
           43160]
          Length = 727

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 84/234 (35%), Gaps = 43/234 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-------- 55
           GLFI  EG +      + + L + L+     V VT EP  T      R +L         
Sbjct: 482 GLFIVVEGADRELTRRYAADLAQVLRDCGCPVEVTSEPSDTQLGRQVRGLLFPPPPGSGT 541

Query: 56  ---------SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
                           GA   A++ AA R  HV  VIRPAL   ++++   ++D+S A+ 
Sbjct: 542 GFPQPEPAVDDTGSPIGAHTAALLAAADRAQHVAAVIRPALERRRVVVNTHYVDTSIAFH 601

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
           G         +      + + ++PD T+++D PV                          
Sbjct: 602 GAGQGLDADRIFRTSLWATRGLLPDLTVVVDSPVTSAPADADA----------------- 644

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELVQKR 215
               E  R+ FL  A   PDR  +V     D+      V+  +   +  LV  R
Sbjct: 645 ----EAVRRAFLAQAEAAPDRYVVVPGELLDTDGEEGMVSPVVRRRLATLVATR 694


>gi|215428729|ref|ZP_03426648.1| thymidylate kinase [Mycobacterium tuberculosis T92]
 gi|289751941|ref|ZP_06511319.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92]
 gi|289692528|gb|EFD59957.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92]
          Length = 214

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 11/196 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEF- 62
           + I+ EG++GAGK T +  L    +     V     P  G   A       L     +  
Sbjct: 1   MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116
               A A +FA  R   V   I+       +++ DR++ S+ AY   R           +
Sbjct: 61  SSVYAMATLFALDRAGAVHT-IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAW 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  ++   +    PD  ++L +  ++  +R + R         D +ER D  + ++   +
Sbjct: 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGAV 178

Query: 177 FLDIARN-QPDRCHIV 191
           + ++A      R  +V
Sbjct: 179 YAELAAQGWGGRWLVV 194


>gi|15610383|ref|NP_217764.1| thymidylate kinase [Mycobacterium tuberculosis H37Rv]
 gi|15842836|ref|NP_337873.1| thymidylate kinase [Mycobacterium tuberculosis CDC1551]
 gi|31794427|ref|NP_856920.1| thymidylate kinase [Mycobacterium bovis AF2122/97]
 gi|121639136|ref|YP_979360.1| thymidylate kinase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663110|ref|YP_001284633.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|148824449|ref|YP_001289203.1| thymidylate kinase [Mycobacterium tuberculosis F11]
 gi|167966685|ref|ZP_02548962.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|215405259|ref|ZP_03417440.1| thymidylate kinase [Mycobacterium tuberculosis 02_1987]
 gi|215413125|ref|ZP_03421826.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A]
 gi|215432211|ref|ZP_03430130.1| thymidylate kinase [Mycobacterium tuberculosis EAS054]
 gi|215447550|ref|ZP_03434302.1| thymidylate kinase [Mycobacterium tuberculosis T85]
 gi|218755033|ref|ZP_03533829.1| thymidylate kinase [Mycobacterium tuberculosis GM 1503]
 gi|219559306|ref|ZP_03538382.1| thymidylate kinase [Mycobacterium tuberculosis T17]
 gi|224991629|ref|YP_002646318.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800289|ref|YP_003033290.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435]
 gi|254365871|ref|ZP_04981916.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem]
 gi|254552350|ref|ZP_05142797.1| thymidylate kinase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188295|ref|ZP_05765769.1| thymidylate kinase [Mycobacterium tuberculosis CPHL_A]
 gi|260202408|ref|ZP_05769899.1| thymidylate kinase [Mycobacterium tuberculosis T46]
 gi|260206598|ref|ZP_05774089.1| thymidylate kinase [Mycobacterium tuberculosis K85]
 gi|289444828|ref|ZP_06434572.1| thymidylate kinase [Mycobacterium tuberculosis T46]
 gi|289448935|ref|ZP_06438679.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A]
 gi|289555525|ref|ZP_06444735.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605]
 gi|289571474|ref|ZP_06451701.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17]
 gi|289575967|ref|ZP_06456194.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85]
 gi|289747065|ref|ZP_06506443.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987]
 gi|289755370|ref|ZP_06514748.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054]
 gi|289759387|ref|ZP_06518765.1| thymidylate kinase [Mycobacterium tuberculosis T85]
 gi|289763435|ref|ZP_06522813.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503]
 gi|294993813|ref|ZP_06799504.1| thymidylate kinase [Mycobacterium tuberculosis 210]
 gi|297635900|ref|ZP_06953680.1| thymidylate kinase [Mycobacterium tuberculosis KZN 4207]
 gi|297732897|ref|ZP_06962015.1| thymidylate kinase [Mycobacterium tuberculosis KZN R506]
 gi|298526723|ref|ZP_07014132.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777576|ref|ZP_07415913.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001]
 gi|306782297|ref|ZP_07420634.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002]
 gi|306786119|ref|ZP_07424441.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003]
 gi|306790487|ref|ZP_07428809.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004]
 gi|306795008|ref|ZP_07433310.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005]
 gi|306799206|ref|ZP_07437508.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006]
 gi|306805054|ref|ZP_07441722.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008]
 gi|306809240|ref|ZP_07445908.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007]
 gi|306969343|ref|ZP_07482004.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009]
 gi|306973695|ref|ZP_07486356.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010]
 gi|307081404|ref|ZP_07490574.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011]
 gi|307086008|ref|ZP_07495121.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012]
 gi|313660229|ref|ZP_07817109.1| thymidylate kinase [Mycobacterium tuberculosis KZN V2475]
 gi|61213172|sp|O05891|KTHY_MYCTU RecName: Full=Thymidylate kinase; AltName: Full=Thymidine
           monophosphate kinase; AltName: Full=dTMP kinase;
           Short=TMPK
 gi|16975072|pdb|1G3U|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Tmp)
 gi|20149891|pdb|1GSI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Tmp)
 gi|20149899|pdb|1GTV|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With
           Thymidine-5'-Diphosphate (Tdp)
 gi|20149900|pdb|1GTV|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With
           Thymidine-5'-Diphosphate (Tdp)
 gi|28373781|pdb|1MRN|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Bisubstrate Inhibitor
           (Tp5a)
 gi|28373782|pdb|1MRS|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With 5-Ch2oh Deoxyuridine
           Monophosphate
 gi|30749563|pdb|1N5I|A Chain A, Crystal Structure Of Inactive Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine
           Monophosphate (Tmp) At Ph 4.6 (Resolution 1.85 A)
 gi|30749564|pdb|1N5J|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Thymidine Diphosphate
           (Tdp) And Thymidine Triphosphate (Ttp) At Ph 5.4 (1.85 A
           Resolution)
 gi|30749565|pdb|1N5K|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate
           (Resolution 2.1 A)
 gi|30749566|pdb|1N5K|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate
           (Resolution 2.1 A)
 gi|30749567|pdb|1N5L|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate,
           After Catalysis In The Crystal (2.3 A Resolution)
 gi|30749568|pdb|1N5L|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Crystallized In Sodium Malonate,
           After Catalysis In The Crystal (2.3 A Resolution)
 gi|60593791|pdb|1W2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Deoxythymidine (Dt)
           (2.1 A Resolution)
 gi|60593792|pdb|1W2G|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Deoxythymidine (Dt)
           (2.1 A Resolution)
 gi|60593793|pdb|1W2H|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Azidothymidine
           Monophosphate (Azt- Mp) (2.0 A Resolution)
 gi|60593794|pdb|1W2H|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
           Thymidylate Kinase Complexed With Azidothymidine
           Monophosphate (Azt- Mp) (2.0 A Resolution)
 gi|2072714|emb|CAB08348.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID
           KINASE) (TMPK) [Mycobacterium tuberculosis H37Rv]
 gi|13883165|gb|AAK47687.1| thymidylate kinase, putative [Mycobacterium tuberculosis CDC1551]
 gi|31620023|emb|CAD95367.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID
           KINASE) (TMPK) [Mycobacterium bovis AF2122/97]
 gi|121494784|emb|CAL73265.1| Probable thymidylate kinase tmk [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|134151384|gb|EBA43429.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem]
 gi|148507262|gb|ABQ75071.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|148722976|gb|ABR07601.1| thymidylate kinase tmk [Mycobacterium tuberculosis F11]
 gi|224774744|dbj|BAH27550.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321792|gb|ACT26395.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435]
 gi|289417747|gb|EFD14987.1| thymidylate kinase [Mycobacterium tuberculosis T46]
 gi|289421893|gb|EFD19094.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A]
 gi|289440157|gb|EFD22650.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605]
 gi|289540398|gb|EFD44976.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85]
 gi|289545228|gb|EFD48876.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17]
 gi|289687593|gb|EFD55081.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987]
 gi|289695957|gb|EFD63386.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054]
 gi|289710941|gb|EFD74957.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503]
 gi|289714951|gb|EFD78963.1| thymidylate kinase [Mycobacterium tuberculosis T85]
 gi|298496517|gb|EFI31811.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214118|gb|EFO73517.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001]
 gi|308325048|gb|EFP13899.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002]
 gi|308329269|gb|EFP18120.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003]
 gi|308333100|gb|EFP21951.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004]
 gi|308336787|gb|EFP25638.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005]
 gi|308340621|gb|EFP29472.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006]
 gi|308344562|gb|EFP33413.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007]
 gi|308348358|gb|EFP37209.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008]
 gi|308353195|gb|EFP42046.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009]
 gi|308356935|gb|EFP45786.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010]
 gi|308360936|gb|EFP49787.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011]
 gi|308364475|gb|EFP53326.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012]
 gi|323718116|gb|EGB27298.1| thymidylate kinase tmk [Mycobacterium tuberculosis CDC1551A]
 gi|326902525|gb|EGE49458.1| thymidylate kinase tmk [Mycobacterium tuberculosis W-148]
 gi|328460024|gb|AEB05447.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 4207]
          Length = 214

 Score =  112 bits (282), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 11/202 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEF- 62
           + I+ EG++GAGK T +  L    +     V     P  G   A       L     +  
Sbjct: 1   MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116
               A A +FA  R   V   I+       +++ DR++ S+ AY   R           +
Sbjct: 61  SSVYAMATLFALDRAGAVHT-IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAW 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  ++   +    PD  ++L +  ++  +R + R         D +ER D  + ++   +
Sbjct: 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGAV 178

Query: 177 FLDIARN-QPDRCHIVDSAHSF 197
           + ++A      R  +V +    
Sbjct: 179 YAELAAQGWGGRWLVVGADVDP 200


>gi|34764303|ref|ZP_00145140.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|27885923|gb|EAA23262.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
          Length = 228

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 84/233 (36%), Gaps = 33/233 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L        
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLGGTFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNKEKEEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  +         +   IHE  
Sbjct: 122 LRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173

Query: 174 RQIFLD--------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            + +L         I++        ++        S + +   I + + E++Q
Sbjct: 174 NEDYLKKSYDNATAISKKY--NWCEIECVENNKIKSIEKINDEIFSKIKEIIQ 224


>gi|308275898|gb|ADO25797.1| thymidylate kinase [Corynebacterium pseudotuberculosis I19]
          Length = 206

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 7/207 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGK T +  L   L  +       ++      A+  + +    G      
Sbjct: 1   MIIAIEGIDGAGKNTLVRALVEKLDARVLGFPRCQDSIHAHLAQ--KALYQEMGDVSDSI 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122
            A A++FA  R + +   +R       ++L DR++ S+ AY   R  D +   ++  L+ 
Sbjct: 59  YAMALLFALDRRE-IAEELRSYKGSEDVILLDRYVSSNAAYSAARAQDWNLVAWVSHLEF 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD  ++L+   ++  +R   R    +    D +E  D  +  +    +  +A 
Sbjct: 118 EEFGLPTPDIQVLLNTSPEVAAQRAAKREEQDQDRSRDCYE-TDSSLQVRTSDAYARLAE 176

Query: 183 NQP-DRCHIVDSAHSFQSVATNILNIV 208
            +      +     S   VA  I+  +
Sbjct: 177 EKRFSPWIVAQPGDSVDDVALKIIQTL 203


>gi|302563323|ref|NP_001181704.1| thymidylate kinase [Macaca mulatta]
          Length = 188

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 43/223 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +            
Sbjct: 63  VEDHAVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGVAFTGAK------------ 109

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                              ++ L     R +       + +E +     E+  Q F  + 
Sbjct: 110 -------------------ELQLADAAKRGAY----GHERYENR--AFQERALQCFHQLM 144

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           R+      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 145 RDTTLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPLGELW 187


>gi|119953569|ref|YP_945779.1| thymidylate kinase [Borrelia turicatae 91E135]
 gi|119862340|gb|AAX18108.1| thymidylate kinase [Borrelia turicatae 91E135]
          Length = 202

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 22/212 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L + L       + T+EP      E  R  L +         
Sbjct: 8   FYCIEGIDGSGKTSIIQKL-QKLCNNKLKYYFTKEPSQGVIGEFIRQQLTNFKN-PLRKV 65

Query: 66  AEAIVFAAARLDHV---ENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + A ++ A R +H+   +N I   L +GK  ++ DR+L SS AYQGE             
Sbjct: 66  SLAYLYVADRYEHLYNTKNGIIEILNKGKTKVITDRYLFSSIAYQGELG----------Y 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +++    +P+    +     I  KR+Q           D FE +     E     + ++ 
Sbjct: 116 KLNKDFPLPEKLFFIKTDPGIAYKRIQ-----ENRIQADLFEFEAAKFKE-INSRYTEML 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +   D   IV   +S +         +++L++
Sbjct: 170 KIFDDLIDIVYIENSNEEDLETSTRKIFDLIK 201


>gi|19551980|ref|NP_599982.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032]
 gi|62389641|ref|YP_225043.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032]
 gi|145294916|ref|YP_001137737.1| thymidylate kinase [Corynebacterium glutamicum R]
 gi|21323519|dbj|BAB98146.1| Thymidylate kinase [Corynebacterium glutamicum ATCC 13032]
 gi|41324976|emb|CAF19457.1| THYMIDYLATE KINASE, PUTATIVE [Corynebacterium glutamicum ATCC
           13032]
 gi|140844836|dbj|BAF53835.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 203

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 15/209 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62
           + +S EGI+GAGK T +S L + +  K     +      T          L   + +   
Sbjct: 1   MIVSIEGIDGAGKNTLVSALTQVIDAK----VLAFPRYETSIHAQLAAEALHGRMGDLTD 56

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSL 120
            A A A +FA  R   +++     L    ++L DR++ S+ AY   R        ++  L
Sbjct: 57  SAYAMATLFALDRHFAIDD-----LNAPGVVLLDRYVASNAAYTAARLLDDDAPRWVADL 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +    P   ++LD P ++   R + R +L  +   D +E  D  + ++  + +  +
Sbjct: 112 EFGRLGLPRPTLQVLLDTPAEVAQDRARRREALDSARARDRYES-DSALQQRTAEHYRRL 170

Query: 181 ARNQPDR-CHIVDSAHSFQSVATNILNIV 208
           A +  +    +V        VA  I+  +
Sbjct: 171 AADNWESPWIVVAPDEDPGHVAQRIVEFL 199


>gi|317059743|ref|ZP_07924228.1| thymidylate kinase [Fusobacterium sp. 3_1_5R]
 gi|313685419|gb|EFS22254.1| thymidylate kinase [Fusobacterium sp. 3_1_5R]
          Length = 226

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 29/231 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57
           N G  I  EG + +GK T   LL                P     A     + L+     
Sbjct: 4   NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGL 63

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH-- 114
             ++      + ++A  R    +        + + + + DR++ S+  +Q  +   +   
Sbjct: 64  NAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKE 123

Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              ++L++L+    +   PDC I LD+P     + ++ R +            ++  IHE
Sbjct: 124 EYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHE 176

Query: 172 KRRQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211
           + R+ +L        ++A      R   VD     S Q +   IL  V E+
Sbjct: 177 RNRE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 226


>gi|189502888|gb|ACE06825.1| unknown [Schistosoma japonicum]
 gi|226488060|emb|CAX75695.1| Thymidylate kinase [Schistosoma japonicum]
 gi|226488064|emb|CAX75697.1| Thymidylate kinase [Schistosoma japonicum]
          Length = 224

 Score =  112 bits (280), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 32/232 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           +  GLF+ FEG+E  GK T   LL+  L +       +   P   TP  +         G
Sbjct: 5   IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117
             +    A  ++  A R +  +  I  AL  G  ++ DR+  S  AY   +         
Sbjct: 63  KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              + +    + PD   I  L  +          S+R+S+  + FE   +   ++    F
Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGGNKFE--TMDFQKRVLTYF 172

Query: 178 LDI----------------ARNQPDRCHIVDSA-HSFQSVATNILNIVWELV 212
             +                A ++P   H + +   +   + + I+ I+   +
Sbjct: 173 GRLSREMESELNENNGDDNAESEPRLWHWIPATGQTVDEIHSCIMAIIDSKL 224


>gi|154333035|ref|XP_001562778.1| thymidylate kinase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059783|emb|CAM37208.1| thymidylate kinase-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 363

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 19/219 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63
           I  EG +GAGK T  +LL R +     +VH    P          R VL      ++E  
Sbjct: 141 IVVEGGDGAGKETQAALLVRQIHASGGEVHALDFPYERGLYGGLVRTVLSGKKGSINELN 200

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121
            +  + +++  R       +   L  G  ++ DR+  +++ +Q  +     +  F+  L+
Sbjct: 201 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 259

Query: 122 EISVQEV-MPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + V+   +P  T  + LDLP    L+    R + R+   LD  E       ++ RQ ++
Sbjct: 260 FMEVELFGLPRATSVLYLDLPPAAALE-AMRRDATRKQ--LDIHETAGGDYKKRVRQTYM 316

Query: 179 DIARNQPDRCHIV-----DSAH-SFQSVATNILNIVWEL 211
               + P   H +     D    + + V T I   +  +
Sbjct: 317 WCCEHLPG-WHHIMCFGDDGRRLTREEVHTAITRHLRSV 354


>gi|319949855|ref|ZP_08023867.1| thymidylate kinase [Dietzia cinnamea P4]
 gi|319436480|gb|EFV91588.1| thymidylate kinase [Dietzia cinnamea P4]
          Length = 222

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 9/183 (4%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EFGAE 65
             EG++GAGK T  + L   L  +   V     P             L  G         
Sbjct: 2   VVEGLDGAGKNTLTTRLVAELDARGLSVGRLAFPRYGTLHADLAADALHGGQAGAADSPH 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-----FLDSL 120
           A A++FA  R   ++ +         ++L DR++ S+ AY   R           ++ +L
Sbjct: 62  AMALLFALDRHAALDAL-AGLAAAHDVVLLDRYVASNAAYTAARLGPDREDEVIAWIGAL 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +   +    P   ++LD PV++  +R   R +       D +ER D  +     +++  +
Sbjct: 121 EFDRLGLPAPHLQLLLDTPVEVAAERAGTREAADPGRARDRYER-DADLQAATGEVYRRL 179

Query: 181 ARN 183
           A  
Sbjct: 180 AAA 182


>gi|291415048|ref|XP_002723765.1| PREDICTED: thymidylate kinase isoform 2 [Oryctolagus cuniculus]
          Length = 188

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 39/211 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L+   +   + R P  +          L    + 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V   I+  L +G  L+ DR+  S  A+   +            
Sbjct: 63  VEDHSVHLLFSANRWEQVP-FIKEKLSQGVTLVVDRYAFSGVAFTSAK------------ 109

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                              ++ L    +R         + +E +     E+  Q F  + 
Sbjct: 110 -------------------ELKLAEAASRGEF----GCERYESR--AFQERALQGFHQLM 144

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           R+      +VD++ S + V   I  +  + +
Sbjct: 145 RDPSLNWKMVDASKSIEDVHEEIRALSEDAI 175


>gi|237742316|ref|ZP_04572797.1| thymidylate kinase [Fusobacterium sp. 4_1_13]
 gi|229429964|gb|EEO40176.1| thymidylate kinase [Fusobacterium sp. 4_1_13]
          Length = 228

 Score =  112 bits (280), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 17/225 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGTFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNKEKEEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  + +        +    +K 
Sbjct: 122 LRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181

Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            +    I++        ++        S + +   I + + E++Q
Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFSKIKEIIQ 224


>gi|308198161|ref|XP_001387114.2| thymidylate kinase [Scheffersomyces stipitis CBS 6054]
 gi|149389058|gb|EAZ63091.2| thymidylate kinase [Pichia stipitis CBS 6054]
          Length = 229

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 37/242 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I  EG++ +GK+T  ++L   L +      + + P  + +     +  L+    
Sbjct: 1   MGRGQLILIEGLDRSGKSTQSAILAEKLGKS----KLLKFPDRSTSVGKIINEYLTNSSF 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----------- 109
           +   +   ++F+A R +    +I   L +G  ++ DR++ S  AY   +           
Sbjct: 57  QLSDQTAHLLFSANRWELNNEIIE-LLNDGYFVILDRYIYSGIAYSLAKYEYSKTANNSG 115

Query: 110 ------DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                  S Q   ++ L         P         + + L         R+    + +E
Sbjct: 116 VIASTTASEQMGDVEWLYGPDKGLPKP--------DLTLFLTLDLVELGKRKGWGNERYE 167

Query: 164 RKDVMIHEKRRQIFLDIA-RNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVSPLSS 221
            +     +  +  FL I    + +   +VD S  + + V   I  +V E   K+V+  + 
Sbjct: 168 LE--EFQKIVKSSFLRILNHEEDETVELVDVSGKNIEEVTALIWEVVEE---KKVNQTTE 222

Query: 222 KK 223
           ++
Sbjct: 223 RQ 224


>gi|226488062|emb|CAX75696.1| Thymidylate kinase [Schistosoma japonicum]
          Length = 224

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 32/232 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           +  GLF+ FEG+E  GK T   LL+  L +       +   P   TP  +         G
Sbjct: 5   IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117
             +    A  ++  A R +  +  I  AL  G  ++ DR+  S  AY   +         
Sbjct: 63  KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              + +    + PD   I  L  +          S+R+S+  + FE   +   ++    F
Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGSNKFE--TMDFQKRVLTYF 172

Query: 178 LDI----------------ARNQPDRCHIVDSA-HSFQSVATNILNIVWELV 212
             +                A ++P   H + +   +   + + I+ I+   +
Sbjct: 173 GRLSREMESELNENNDDDNAESEPRLWHWIPATGQTVDEIHSCIMAIIDSKL 224


>gi|226488066|emb|CAX75698.1| Thymidylate kinase [Schistosoma japonicum]
 gi|226488068|emb|CAX75699.1| Thymidylate kinase [Schistosoma japonicum]
          Length = 224

 Score =  111 bits (279), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 32/232 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           +  GLF+ FEG+E  GK T   LL+  L +       +   P   TP  +         G
Sbjct: 5   IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117
             +    A  ++  A R +  +  I  AL  G  ++ DR+  S  AY   +         
Sbjct: 63  KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              + +    + PD   I  L  +          S+R+S+  + FE   +   ++    F
Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGGNKFE--TMDFQKRVLTYF 172

Query: 178 LDI----------------ARNQPDRCHIVDSA-HSFQSVATNILNIVWELV 212
             +                A ++P   H + +   +   + + I+ I+   +
Sbjct: 173 GRLSREMESELNENNDDDNAESEPRLWHWIPATGQTVDEIHSCIMAIIDSKL 224


>gi|255728491|ref|XP_002549171.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404]
 gi|240133487|gb|EER33043.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404]
          Length = 222

 Score =  111 bits (279), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 79/223 (35%), Gaps = 30/223 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
           M  G  I  EG++ +GK+T  S+L            + + P   TP  +      L+   
Sbjct: 1   MPRGQLILIEGLDRSGKSTQASILASKFTSS----QLIKFPDRSTPIGKLINE-YLTNKS 55

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---- 115
                ++  ++F+A R + +   I+  L +G  ++ DR++ S  AY   ++         
Sbjct: 56  FSLNDQSAHLLFSANRWE-LNQQIQELLNKGYFVILDRYIYSGIAYTLAKNEINDESISS 114

Query: 116 --------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                    +D L         P         + + L       S R+    + +E +  
Sbjct: 115 GKNSKQLGDVDWLLAPDKGLPKP--------DLTLFLTLDLEEISKRKGWGDERYELQ-- 164

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVW 209
               K +  FL +   +     IVD    +   V+  + +I+ 
Sbjct: 165 QFQAKVKDCFLQVLDTKDPSICIVDVGEKNIDQVSKQLWDIIE 207


>gi|257453209|ref|ZP_05618508.1| thymidylate kinase [Fusobacterium sp. 3_1_5R]
          Length = 222

 Score =  111 bits (279), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 29/229 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL                P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGLNA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH---- 114
           ++      + ++A  R    +        + + + + DR++ S+  +Q  +   +     
Sbjct: 62  EKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKEEY 121

Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            ++L++L+    +   PDC I LD+P     + ++ R +            ++  IHE+ 
Sbjct: 122 LIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHERN 174

Query: 174 RQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211
           R+ +L        ++A      R   VD     S Q +   IL  V E+
Sbjct: 175 RE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 222


>gi|300790592|ref|YP_003770883.1| dTMP kinase [Amycolatopsis mediterranei U32]
 gi|299800106|gb|ADJ50481.1| dTMP kinase [Amycolatopsis mediterranei U32]
          Length = 703

 Score =  111 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 32/228 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISL------LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           +G  I+ EG      TT I+       L  +++     V V  +P    A +  R   L 
Sbjct: 479 NGYLIAVEG------TTAINTAIQAVNLADWMRGGTRPVVVAADP----ALDDQRLAALV 528

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G    GA A+A+  AA R D VE  ++PAL  G +++ +RF+DS  A+           
Sbjct: 529 SGASLTGARAQALAAAAVRADIVERHVQPALDAGSVVVMERFVDSPLAHLSAVAGLDSDE 588

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+ L + +   + PD TI+LD                   A  D      +    + + +
Sbjct: 589 LEGLADWATGRLRPDMTILLDAAP--------------NGAPRDK--SATMNDQWRVQHL 632

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             ++A   P+R  +VD+  +   VA  I   +  +   R++ L+   +
Sbjct: 633 LTEMAAADPERYVVVDADGTDVEVAERIRTALRAVFVGRLAALAPTTE 680


>gi|167769946|ref|ZP_02441999.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM
           17241]
 gi|167667937|gb|EDS12067.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM
           17241]
          Length = 221

 Score =  111 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 66/180 (36%), Gaps = 10/180 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---V 59
            G  I  +G++GAGK T  +LL     R          P  T  + A     L+      
Sbjct: 2   KGRLIVIDGLDGAGKQTQAALLLDRFARAGVPARGISFPDYTHPSSALVKQYLAGEFGQA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFL 117
           D+  A A +  +A  R        +   + G  ++ DR+  S+  +Q  +        F+
Sbjct: 62  DDVPAYAASSFYAVDRFASYVGYWKDDYLAGHTIIADRYATSNLIHQMGKLPRGQWDAFI 121

Query: 118 DSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           D   +     +    PD  + LD+  D+  + +  RY    +A  D  E  +     + R
Sbjct: 122 DWSADFEYEKLGLPKPDAVLFLDMHPDVSERLLMKRYGGD-AAKKDIHEA-NAAYMRRCR 179


>gi|325119339|emb|CBZ54892.1| Thymidylate kinase, related [Neospora caninum Liverpool]
          Length = 271

 Score =  111 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 89/266 (33%), Gaps = 57/266 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  + FEGI+ +GK+T   L    L ++     + R P   T   +     L S    
Sbjct: 7   KRGCLVVFEGIDRSGKSTQARLAYERLLKEGQPTELIRFPDRTTSIGQVLDKFLASATWS 66

Query: 61  EFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQ 113
             G       +   ++FAA R +    ++R AL EGK +L DR+  S  AY  G      
Sbjct: 67  NEGPCQIPPPQLTHLLFAANRWEAQARILR-ALGEGKTVLVDRYSFSGIAYTVGAAPVLA 125

Query: 114 HLFLDSL---------------------------------QEISVQEVMPDCTIILDLPV 140
                SL                                 +E     + PD    LD+  
Sbjct: 126 ETEAKSLQADANASGDPAKAAWSWAASTAATGASVDPAFCRETERGLLAPDAVFFLDISP 185

Query: 141 DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQS 199
                R             + +E+  +   E+  Q++     + P     +  ++ S   
Sbjct: 186 RETQSR--------GGYGEEVYEK--LATQERVYQVYRQF-ESLP-YWRRIPAASVSPNE 233

Query: 200 VATNILNIVWELVQ--KRVSPLSSKK 223
           +   ++  +  ++Q  +   PLS ++
Sbjct: 234 LHETVIENLKAVIQAAQPEQPLSPRE 259


>gi|158314647|ref|YP_001507155.1| thymidylate kinase [Frankia sp. EAN1pec]
 gi|158110052|gb|ABW12249.1| thymidylate kinase [Frankia sp. EAN1pec]
          Length = 224

 Score =  111 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 87/224 (38%), Gaps = 23/224 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62
           + +S EG+ G+GK+T   LL+  L+ +   V    +       +    +  + S   D F
Sbjct: 1   MLVSLEGLPGSGKSTQARLLEGRLRGEGLRVTYLPDLATLDTGDVGTALVEIFSSSDDPF 60

Query: 63  ----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-------QGERDS 111
                   E ++ AA R D V   I PAL    +++ DR + + ++Y       Q   + 
Sbjct: 61  LRHGDVVTECLLAAAVRADIVATRIEPALDHHDVVIEDRGVHTMFSYGLASLIRQHAAEV 120

Query: 112 SQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              + +LD L  ++      D  + L  PV   + R + R   R +      +R  +   
Sbjct: 121 DDAVSWLDGLGRLA--GRRADVVLWLSAPVGEMVVRAEARDGRRWTGE----QRAYLSF- 173

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 + ++A        +  +  + ++V   +  +V   +++
Sbjct: 174 --VDLAYQELAARDAGMVRVPTAGQAPEAVHAAVWEVVAAQLKR 215


>gi|296206037|ref|XP_002750036.1| PREDICTED: thymidylate kinase-like isoform 2 [Callithrix jacchus]
          Length = 188

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 39/212 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +            
Sbjct: 63  LEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVMDRYAFSGVAFSGAK------------ 109

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                              ++ L     R +       + +E  +    E+  Q F  + 
Sbjct: 110 -------------------ELQLADAAKRSAF----GHERYE--NGAFQERALQCFHQLM 144

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           R+      +VD++ S ++V  +IL +  + ++
Sbjct: 145 RDTTVNWKMVDASKSIEAVHEDILVLAEDAIR 176


>gi|172040159|ref|YP_001799873.1| thymidylate kinase [Corynebacterium urealyticum DSM 7109]
 gi|171851463|emb|CAQ04439.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 231

 Score =  110 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 20/198 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE---AARHVLLSCGVDE 61
           + I+FEGI+GAGK T ++ L+  L  +   V     P    +     A R +    G   
Sbjct: 1   MIIAFEGIDGAGKNTLVTALEAELLARELPVARVSFPRYEDSVHAQLAQRALTGQMGDLI 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-------- 113
                 A +FA  R + V   +     +G I+L DRF+ S+ AY   R + +        
Sbjct: 61  DSIHGMATLFALDRAE-VAEQLEDLDADGYIVLMDRFVASNAAYSAARLAEEATGGAEPL 119

Query: 114 ----HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
               H  ++ ++ + V ++   +PD  +++D   ++  +R ++R     +   D +E  D
Sbjct: 120 EPAQHPVVEWVRSLEVDDLGSPVPDLQVLVDASAEVAGERAKSREQQDAARTRDAYES-D 178

Query: 167 VMIHEKRRQIFLDIARNQ 184
             + ++  + +  +A  +
Sbjct: 179 GGLQQRTLEAYHSLASAE 196


>gi|296327936|ref|ZP_06870471.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154892|gb|EFG95674.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 225

 Score =  110 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 88/230 (38%), Gaps = 29/230 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNEEKDEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  + +     ERKD+  HE  
Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGS-----ERKDI--HE-V 173

Query: 174 RQIFLDI------ARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
            + +L        A ++      ++        S + +   I + + E++
Sbjct: 174 NEDYLKRSYENATAISKKYNWCEIECVENNKIKSIEKINDEIFSKIKEII 223


>gi|19704658|ref|NP_604220.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714964|gb|AAL95519.1| Thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 225

 Score =  110 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 88/230 (38%), Gaps = 29/230 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNEKKDEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  + +     ERKD+  HE  
Sbjct: 122 LKWLVDLEYNKNEIPEPDIVIFLKMPIDKAKELMENRKNKIDGS-----ERKDI--HE-V 173

Query: 174 RQIFLDI------ARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
            + +L        A ++      ++        S + +   I + + E++
Sbjct: 174 NEDYLKRSYENATAISKKYNWCEIECVENNKIKSIEKINDEIFSKIKEII 223


>gi|326925774|ref|XP_003209084.1| PREDICTED: thymidylate kinase-like isoform 2 [Meleagris gallopavo]
          Length = 188

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 39/212 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ AGK+T    L + LQ   +   + R P  T          LS    E 
Sbjct: 5   RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLS-REREL 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++F+A R +HV + ++  L +G  L+ DR+  S  A+   ++            
Sbjct: 64  EDHVVHLLFSANRWEHVTS-MKEKLHQGITLVVDRYAFSGVAFTSAKE------------ 110

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                          L  +    R         +   + +E       +K  Q F  +  
Sbjct: 111 ---------------LSPEEAAAR--------GNFGRERYENGP--FQKKVLQSFHHLMN 145

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +      +D++ S + +   I  +  + +Q+
Sbjct: 146 EKTLNWKTMDASKSIEDLHREIKTVAEKTMQE 177


>gi|193631931|ref|XP_001951558.1| PREDICTED: thymidylate kinase-like isoform 3 [Acyrthosiphon pisum]
 gi|193631933|ref|XP_001951544.1| PREDICTED: thymidylate kinase-like isoform 2 [Acyrthosiphon pisum]
 gi|193631935|ref|XP_001951524.1| PREDICTED: thymidylate kinase-like isoform 1 [Acyrthosiphon pisum]
 gi|328724839|ref|XP_003248266.1| PREDICTED: thymidylate kinase-like [Acyrthosiphon pisum]
          Length = 212

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 67/211 (31%), Gaps = 20/211 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG + +GKTT  + L   L            P   TP        L      E
Sbjct: 7   RGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYL--SRKIE 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + +E  IR  +  G  L+ DR+  S   +   +            
Sbjct: 65  LPDRSVHLLFSANRWE-LEPEIRKQIESGVTLIVDRYSYSGVVFTSAKQCVDF---KWCC 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  + L L +    KR             + +E  ++    K    +    
Sbjct: 121 GPENGLPKPDIVMFLKLSIGEMAKR--------SGFGDERYE--NIEFQNKVDINYDKF- 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             + D    VD+A     +   +L  V + +
Sbjct: 170 --KNDNFIQVDAAQDVSILTNTLLEQVLKTI 198


>gi|254302827|ref|ZP_04970185.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323019|gb|EDK88269.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 225

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 86/231 (37%), Gaps = 29/231 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +        +  I++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYTDDYIIITDRYVTSNMIHQASKIKNNEEKDEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  +         +   IHE  
Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173

Query: 174 RQIFLD--------IARNQPDR-CHIVDSA--HSFQSVATNILNIVWELVQ 213
            + +L         I++    R    V++    S + +   I + + ++++
Sbjct: 174 NEDYLKKSYDNATAISKKYNWREIECVENNKIKSIERINDEIFSKIKKIIE 224


>gi|224059750|ref|XP_002191830.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 215

 Score =  109 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 16/171 (9%)

Query: 44  TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
           T   +     L              ++F+A R +HV  +++  L +G  ++ DR+  S  
Sbjct: 50  TEIGQLISSYL--GREKNLEDHTIHLLFSANRWEHVP-MMKEKLHQGITVVVDRYAFSGV 106

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           A+   + +     L+  ++  V    PD  + L L  +   +R             + +E
Sbjct: 107 AFTSAKGNFG---LEWCKQPDVGLPKPDLILFLQLNPEAAAER--------GDFGHERYE 155

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                  EK  Q F  +  ++      VD++ S + +   I +I  E +++
Sbjct: 156 --TSSFQEKVLQSFYCLMEDKSLNWKTVDASKSIEDLHREIKSIAKETMEE 204


>gi|187918646|ref|YP_001884212.1| thymidylate kinase [Borrelia hermsii DAH]
 gi|119861494|gb|AAX17289.1| thymidylate kinase [Borrelia hermsii DAH]
          Length = 212

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 21/168 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F   EGI+G+GKT+ I  L + L       H T+EP      +  R  L +         
Sbjct: 18  FYCIEGIDGSGKTSIIQKL-QKLCNNKLKYHFTKEPSQGIIGKFIRKQLTNLKN-PLRRV 75

Query: 66  AEAIVFAAARLDHV---ENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + A ++AA R +H+   +N I   L +GK  ++ DR+L SS  YQGE             
Sbjct: 76  SLAHLYAADRYEHLYNTKNGILEILNKGKTKVITDRYLFSSIVYQGELG----------Y 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +++    +P+    +     I  KR+Q           D FE ++   
Sbjct: 126 KLNRDFPLPEKLFFIKTDPSIAYKRIQ-----ENRIQADLFEFEEAKF 168


>gi|227486952|ref|ZP_03917268.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227093026|gb|EEI28338.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 205

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 6/207 (2%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++ EGI+GAGK T +  L + +  +       R      A  A + +    G      
Sbjct: 1   MILAVEGIDGAGKNTLVRDLLKHIDAETLS--FPRYSTSDAAKLARKALYGRMGDMTESP 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122
            A A +FA  R    E + + A  +  IL+ DR++ S+ AY   R  D     ++  L+ 
Sbjct: 59  YAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYDLEY 118

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    P   I+L+ P  +  +R ++R         D +E+ D  +  +    +  +AR
Sbjct: 119 GELGLPKPALQILLETPASVAQERAESRARAERDRAKDTYEQ-DSSLQVRTSVAYRRLAR 177

Query: 183 NQ-PDRCHIVDSAHSFQSVATNILNIV 208
            Q      IV    + Q     ILN +
Sbjct: 178 GQWASPWLIVPHTTTPQEATEEILNRL 204


>gi|256027750|ref|ZP_05441584.1| thymidylate kinase [Fusobacterium sp. D11]
 gi|289765707|ref|ZP_06525085.1| thymidylate kinase [Fusobacterium sp. D11]
 gi|289717262|gb|EFD81274.1| thymidylate kinase [Fusobacterium sp. D11]
          Length = 225

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 84/225 (37%), Gaps = 17/225 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNEEKDEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  + +        +    +K 
Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181

Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            +    I++      + ++        S + +   I + + E++Q
Sbjct: 182 YENATAISKKY--NWYEIECVENNKIKSIEKINDEIFSKIKEIIQ 224


>gi|319442834|ref|ZP_07991990.1| thymidylate kinase [Corynebacterium variabile DSM 44702]
          Length = 236

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 91/217 (41%), Gaps = 16/217 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEF- 62
           + I+FEGI+GAGK T ++ L+  L  +   V     P   T          L  G+ +  
Sbjct: 1   MIIAFEGIDGAGKNTVVTALEAELIAREIPVARLAFPRYETSVHAQLASAALHGGMGDLV 60

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH------- 114
             A   A +FA  R + V   +     +G ++L DR++ S+ AY   R S          
Sbjct: 61  DSAYGMATLFALDRAE-VAAELTGFDEDGYVVLLDRWVASNAAYSAARLSQDASAGGESS 119

Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
               ++D L+   +   +PD  +++++P  +   RV  R        +D +E  D  +  
Sbjct: 120 EVVAWVDDLEFTQLGIPVPDLQVLVNVPDSVTAGRVAARAEEDAGRGVDAYE-VDGGLQA 178

Query: 172 KRRQIFLDIARNQPDR-CHIVDSAHSFQSVATNILNI 207
           +    +  +A  + +    ++D++    ++   ++ +
Sbjct: 179 RTLAAYRALADARWNSPWLVLDNSGDRSALDAQLVEL 215


>gi|237744136|ref|ZP_04574617.1| thymidylate kinase [Fusobacterium sp. 7_1]
 gi|229431365|gb|EEO41577.1| thymidylate kinase [Fusobacterium sp. 7_1]
          Length = 225

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 81/225 (36%), Gaps = 17/225 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNEEKDEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  + +        +    +K 
Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181

Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            +    I++        ++        S + +   I   + E +Q
Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFFKIKERIQ 224


>gi|269860112|ref|XP_002649779.1| thymidylate kinase [Enterocytozoon bieneusi H348]
 gi|220066838|gb|EED44309.1| thymidylate kinase [Enterocytozoon bieneusi H348]
          Length = 205

 Score =  108 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 30/216 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SC 57
           N  LFI  EGI+ +GKTT  +L+ + +      V        T   +   + L     + 
Sbjct: 5   NKNLFIVLEGIDRSGKTTLCNLISKKINA----VKFNFPDRTTNTGKKIDNFLKQYCENV 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                  E    +    R + +E +  I   L    I +CDR+  S   Y   +  ++  
Sbjct: 61  ENIFDNKEINEKLHLLFRDNRLEKIPFILKTLENHDI-ICDRYSMSGIVYSISKGLNE-- 117

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
               +++      +PD T  LD+  +I  KR         +   D  E       +K  +
Sbjct: 118 --KWVKDSEKDLPIPDITFFLDVNPEISFKR-----QDFGNEIHDTIE-----FQKKVYE 165

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +L       D    +    + +++   ILN +   
Sbjct: 166 NYLK----NKDYMIFIK-NDTIENMLNEILNYINRF 196


>gi|256845595|ref|ZP_05551053.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2]
 gi|256719154|gb|EEU32709.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2]
          Length = 228

 Score =  108 bits (272), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 83/233 (35%), Gaps = 33/233 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L        
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLGGTFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNKEKEEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  +         +   IHE  
Sbjct: 122 LRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173

Query: 174 RQIFLD--------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            + +L         I++        ++        S + +   I   + +++Q
Sbjct: 174 NEDYLKKSYDNATAISKKY--NWCEIECVENNKIKSIEKINDEIFFKIKDIIQ 224


>gi|120402750|ref|YP_952579.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1]
 gi|119955568|gb|ABM12573.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1]
          Length = 211

 Score =  108 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I  EG++GAGK T  + L+   +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIVIEGVDGAGKRTLTNGLRAAFESDGRSVATLAFPRYGVSVPADLAAEALHGAHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116
               A A++FA  R    +  I        ++L DR++ S+ AY   R     D     +
Sbjct: 61  ESVYAMAVLFAMDRAGARDE-IDHLKSAYDVVLLDRYVASNAAYSAARLHQGVDGDVAAW 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+   ++   PD  ++LD+P ++  +R  +R +       D +ER D  +  +   +
Sbjct: 120 VGDLEYGRLRLPKPDWQVLLDVPTELAAQRAVSRAAREADRARDAYER-DDGLQRRTSAV 178

Query: 177 FLDIARNQ 184
           + ++A   
Sbjct: 179 YAELAAAN 186


>gi|302530026|ref|ZP_07282368.1| thymidylate kinase [Streptomyces sp. AA4]
 gi|302438921|gb|EFL10737.1| thymidylate kinase [Streptomyces sp. AA4]
          Length = 210

 Score =  108 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 15/203 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-EFG 63
           +  EG++GAGK T    L   L+     V     P  G +  A+  R  L     D    
Sbjct: 2   VVIEGLDGAGKRTLSEGLTAALEDAGASVGSLAFPRYGRSVHADLVREALHRGHGDLADS 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121
               A+++A  R    +  IR  L    ++L DR++ S+ AY     R+ +    +  + 
Sbjct: 62  VYGMAMLYALDRSGAADE-IRALLAANDVVLLDRYVASNAAYAAARLREHADGAVVQWVW 120

Query: 122 EISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           ++ V       PD  ++L +  ++  +R   R     +   D FE  D  + ++   ++ 
Sbjct: 121 DLEVTRFGLPRPDAHLLLRVSPEVAAERAVRRAESDAARTRDAFES-DDSLQQRCAAVYD 179

Query: 179 DIARN---QPDRCHIVDSAHSFQ 198
           ++A      P   H++D      
Sbjct: 180 ELAAASWLAP--WHVLDGVAGVD 200


>gi|258654373|ref|YP_003203529.1| thymidylate kinase [Nakamurella multipartita DSM 44233]
 gi|258557598|gb|ACV80540.1| thymidylate kinase [Nakamurella multipartita DSM 44233]
          Length = 213

 Score =  108 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 71/192 (36%), Gaps = 15/192 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  EG++G+GK T    L    Q     V     P       A   ++        G
Sbjct: 2   GRLIVIEGLDGSGKRTLTQALAARWQADGRTVATLAFPRYGLDVHA--DLVQDALYGRLG 59

Query: 64  AEAE-----AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----- 113
             ++     A++FA  R       IR       +LL DR++ S+ AY   R         
Sbjct: 60  DLSDSIYGPAVLFALDRRAAAGQ-IRDLRQAHDVLLLDRYVTSNAAYGSARLGGPDRPTD 118

Query: 114 -HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
              ++ +L+        PD  I+L   V++  +R +NR    +   LD FE  D  +  +
Sbjct: 119 FPAWVRALEIDRFGVPAPDHQILLATSVELAGQRARNRADQDQDRALDRFEA-DDGLQRR 177

Query: 173 RRQIFLDIARNQ 184
              ++  +A   
Sbjct: 178 TAAMYRRLAEQD 189


>gi|227541887|ref|ZP_03971936.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182330|gb|EEI63302.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 205

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS-CGVDE 61
           + ++ EGI+GAGK T   L++  L  KN D      P  + +  A+ AR  L    G   
Sbjct: 1   MILAVEGIDGAGKNT---LVRDLL--KNIDAETLSFPRYSTSDAAKLARKALYGRMGDMT 55

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
               A A +FA  R    E + + A  +  IL+ DR++ S+ AY   R  D     ++  
Sbjct: 56  ESPYAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYD 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+   +    P   I+L+ P  +  +R ++R         D +E+ D  +  +    +  
Sbjct: 116 LEYGELGLPKPALQILLETPASVAQERAESRARAERDRAKDTYEQ-DSSLQVRTSVAYRR 174

Query: 180 IARNQ-PDRCHIVDSAHSFQSVATNILNIV 208
           +AR Q      IV    + Q     ILN +
Sbjct: 175 LARGQWASPWLIVPHTTTPQEATEEILNRL 204


>gi|294785116|ref|ZP_06750404.1| dTMP kinase [Fusobacterium sp. 3_1_27]
 gi|294486830|gb|EFG34192.1| dTMP kinase [Fusobacterium sp. 3_1_27]
          Length = 225

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 82/225 (36%), Gaps = 17/225 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNEEKEEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  + +        +    +K 
Sbjct: 122 LRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181

Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            +    I++        ++        S + +   I   + +++Q
Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFFKIKDIIQ 224


>gi|259013537|ref|NP_001158503.1| thymidylate kinase isoform 2 [Homo sapiens]
 gi|114584337|ref|XP_001161587.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate kinase)
           isoform 1 [Pan troglodytes]
 gi|219521040|gb|AAI71902.1| LOC727761 protein [Homo sapiens]
          Length = 188

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 43/223 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +            
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK------------ 109

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                              ++ L     R +       + +E  +    E+  + F  + 
Sbjct: 110 -------------------ELQLADAAKRGAF----GHERYE--NGAFQERALRCFHQLM 144

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 145 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 187


>gi|326392432|ref|ZP_08213833.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
 gi|325991527|gb|EGD50118.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200]
          Length = 92

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 26  RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRP 85
            +L ++ Y++ V REPGGT   E  R +LL    +      E +++A++R   VE  I P
Sbjct: 1   EYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFISPVTETLLYASSRAQLVEEKILP 59

Query: 86  ALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           AL +G+I++ DRF+DSSY YQG         L
Sbjct: 60  ALEKGQIVILDRFVDSSYVYQGYARGLGIEKL 91


>gi|20178547|ref|NP_619968.1| CPXV186 protein [Cowpox virus]
 gi|20153165|gb|AAM13626.1|AF482758_177 CPXV186 protein [Cowpox virus]
          Length = 227

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 24  MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 81  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 183

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223


>gi|30519543|emb|CAD90718.1| A51R protein [Cowpox virus]
          Length = 227

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 24  MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 81  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 183

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223


>gi|296168958|ref|ZP_06850627.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896427|gb|EFG76080.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 229

 Score =  107 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 11/202 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T    L++  +     V +   P  G +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLSEGLRKAFEAAGKSVAIVGFPRYGKSVTADVAAEALHGRHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
               A A++FA  R   VE+ I     +  +++ DR++ S+ AY   R  + +       
Sbjct: 61  ASVYAMAMLFALDRAGAVED-IEALRRDHDVVILDRYVASNAAYSAARLHEGAGGAAAAW 119

Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + E   + +    PD  ++L +P D+  +R ++R         D +ER D  +  +   +
Sbjct: 120 VLEFEYRRLRLPAPDWQVLLAVPADLAGQRARSRAESDPGRARDSYER-DDELQLRTGAV 178

Query: 177 FLDIARN-QPDRCHIVDSAHSF 197
           + ++A         + D+    
Sbjct: 179 YAELAAAGWGGPWLVADADVDP 200


>gi|145225292|ref|YP_001135970.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315445589|ref|YP_004078468.1| thymidylate kinase [Mycobacterium sp. Spyr1]
 gi|145217778|gb|ABP47182.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315263892|gb|ADU00634.1| thymidylate kinase [Mycobacterium sp. Spyr1]
          Length = 209

 Score =  107 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 10/188 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61
           + I  EG++GAGK T  + L+   +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIVIEGVDGAGKRTLTNGLRAAFESGGRSVATLAFPRYGVSVPADVAAEALHGQHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119
               A A++FA  R    +  I        +++ DR++ S+ AY   R    +    +  
Sbjct: 61  DSVYAMAMLFAMDRAGARDE-IGHLTSAYSVVILDRYVASNAAYSAARLHQGADGDVVAW 119

Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           ++++    +    P   ++LD+P ++  +R  NR +   +   D +ER D  +  +   +
Sbjct: 120 VRDLEYGRLKLPVPTWQVLLDVPTELAAQRAVNRAAEDAARARDAYER-DDGLQRRTGAV 178

Query: 177 FLDIARNQ 184
           + ++A  Q
Sbjct: 179 YAELAAAQ 186


>gi|262068171|ref|ZP_06027783.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693]
 gi|291378114|gb|EFE85632.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693]
          Length = 224

 Score =  107 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 33/233 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVVEGTDSSGKETQTKLLYERVKKVYDKTIKISFPNYDSPACEPVKMYLAGKFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +        D 
Sbjct: 62  TKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDTEAKDDY 121

Query: 120 LQEIS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  +        +   PD  I L +P+D   + ++NR +  +         +   IHE  
Sbjct: 122 LNWLVDLEYKKNEIPEPDMVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173

Query: 174 RQIFLD--------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
            + +L         I++        ++        + + +   I + + EL++
Sbjct: 174 NEDYLKKSYDNATAISKKYS--WCEIECVENNEIKTIEKINDEIFSKIKELLK 224


>gi|196234357|ref|ZP_03133185.1| thymidylate kinase [Chthoniobacter flavus Ellin428]
 gi|196221549|gb|EDY16091.1| thymidylate kinase [Chthoniobacter flavus Ellin428]
          Length = 253

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 81/218 (37%), Gaps = 26/218 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G   + EG +G+G++T I +L ++L+   Y V           +E           +  
Sbjct: 22  AGKLFAIEGADGSGRSTQIGMLSQWLEANGYAVRHMGLRRSNLVSEELEEA---KQGNVL 78

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                ++ +A    D + + I PAL  G I++ DR++ +  A    RD  +       + 
Sbjct: 79  THTTLSLFYATDFFDQLVHEIVPALRAGLIVIADRYIYTLMA----RDLVRGADRAWTRN 134

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVM-----------IH 170
           +    ++PD      +     ++R     + ++++ LDY+E   D+              
Sbjct: 135 LYSPALVPDAVFYFRVGAAQLVER-----NFQKNSTLDYWESGMDLGLSRDMFSSFVKYQ 189

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +  F  +         I++     +++   +   +
Sbjct: 190 RLLQNEFQKMQEEYG--FEIINGNSRVETIQRELRKKI 225


>gi|256374448|ref|YP_003098108.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
 gi|255918751|gb|ACU34262.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827]
          Length = 710

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 18/210 (8%)

Query: 3   SGLFISFEGIEGA-GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I+ EG + +   +     L   L+   ++V +  EP           +L     D 
Sbjct: 479 RGLLITVEG-DASLDTSVQARELAEVLRSAGHEVLLASEPDLDE--RRVHELL--NTADL 533

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  A A+V AA R D VE  +RPAL  G I++ DRF DS  A+     S     L+ L 
Sbjct: 534 AGVRAHALVAAAVRADVVERRVRPALEAGLIVVVDRFADSPIAHFSASGSVDTSELERLS 593

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQN-------RYSLRESACLDYFERKD-----VMI 169
           + +   + PD T++LD                     +    A     E        V  
Sbjct: 594 DWATGRLRPDLTVLLDRTPTTLPASALGAPPGAVPAGTAPPGAASAGLEGARRTITHVEH 653

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199
           H + +++   +A   PDR  +VD+  +   
Sbjct: 654 HWQVQRLLTGMAAADPDRYLVVDADGTPDE 683


>gi|159109111|ref|XP_001704822.1| CDC8 [Giardia lamblia ATCC 50803]
 gi|157432895|gb|EDO77148.1| CDC8 [Giardia lamblia ATCC 50803]
          Length = 254

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 87/224 (38%), Gaps = 28/224 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GLF+  EG++ AGK T I  +   L++    V V   P  T  + A     L   +D 
Sbjct: 30  TRGLFVVIEGLDRAGKDTMIGQVVALLRQAGESVVVQAFPDRTTKSGAVLDRFLQRELD- 88

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                   ++A  R + +E V+   L+ G  ++C R+  S  AY   +       +++  
Sbjct: 89  LSDWDCHRLYAENRKE-LEEVLCNTLLAGTTVICSRYAYSGVAYTAAKGHDMRRCMEA-- 145

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180
                 + PD  I LD+          +  ++R     + +E +D     K    F  + 
Sbjct: 146 --DKGLLRPDLVIFLDVDA--------SAVAVRTGFGKERYETQD--FQVKVYTAFQTLW 193

Query: 181 ---------ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                    ++++ DR  ++      + ++     I+  +++++
Sbjct: 194 ELLRNSQNGSQDEEDRTTLL--TIRPEDISEAPKQILQAILERK 235


>gi|320531334|ref|ZP_08032307.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136462|gb|EFW28437.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 109

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GLFISFEG +G GKTT I +L   L   + D  +TREPGGT      R +LL  G     
Sbjct: 28  GLFISFEGGDGVGKTTQIRILADLLAAADVDHILTREPGGTELGVEIRRLLLHGGH--VA 85

Query: 64  AEAEAIVFAAARLDHVENVIRPAL 87
             AEA+++AA R  H+   +RPAL
Sbjct: 86  PRAEALLYAADRAHHIATRVRPAL 109


>gi|1836042|gb|AAB46838.1| thymidylate kinase [Mus sp.]
          Length = 227

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 17/195 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60
             G  I  EG++ AGKTT    L   L    +   + R P   T   +     L      
Sbjct: 4   RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYL--EKKT 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E    +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +   ++  LD  
Sbjct: 62  ELEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTGAK---ENFSLDWC 117

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++  V    PD        + + L+      + R    L+ +E       ++    F  +
Sbjct: 118 KQPDVGLPKPD--------LILFLQLQLLDAAARGEFGLERYE--TGTFQKQVLLCFQQL 167

Query: 181 ARNQPDRCHIVDSAH 195
              +     +VD++ 
Sbjct: 168 MEEKNLNWKVVDASK 182


>gi|297669949|ref|XP_002813146.1| PREDICTED: thymidylate kinase-like isoform 2 [Pongo abelii]
          Length = 188

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 78/223 (34%), Gaps = 43/223 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + V  +I+  L +G  L+ DR+  S  A+ G +            
Sbjct: 63  VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK------------ 109

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                              ++ L     R +       + +E +     E+    F  + 
Sbjct: 110 -------------------ELQLADAAKRGAF----GHERYENR--AFQERALWCFHQLM 144

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           R+      +VD++ S ++V  +I     +++    +K +  L 
Sbjct: 145 RDTTLNWKMVDASKSIEAVHEDIRMLSEDVICTATEKPLGELW 187


>gi|66275971|ref|YP_233056.1| thymidylate kinase [Vaccinia virus]
 gi|29692280|gb|AAO89453.1| thymidylate kinase [Vaccinia virus WR]
 gi|37551619|gb|AAQ93271.1| thymidylate kinase [Vaccinia virus]
 gi|88854248|gb|ABD52666.1| thymidylate kinase TMK [Vaccinia virus]
 gi|90819834|gb|ABD98644.1| VACV-DUKE-182 [Vaccinia virus]
          Length = 227

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 24  MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 81  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 183

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223


>gi|90660407|gb|ABD97521.1| thymidylate kinase [Cowpox virus]
          Length = 227

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 24  MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 81  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 183

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223


>gi|86739022|ref|YP_479422.1| thymidylate kinase [Frankia sp. CcI3]
 gi|86565884|gb|ABD09693.1| thymidylate kinase [Frankia sp. CcI3]
          Length = 212

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 17/201 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVLLSC---GV 59
           + ++ EG++GAGK T    L   L      V     P     P   A R +L        
Sbjct: 1   MILAIEGVDGAGKNTLTGRLVARLTAAGRSVATLAYPRYATEPLGPAVRGLLAGDPRLAP 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114
                 A A++FA  R +    +    +    +++ DR++ S+ AY   R       S  
Sbjct: 61  LAASPRASAMMFALDRANSRPEL-DALVRTHDLMIIDRYVASNAAYGAARLPATERESFP 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            ++  L+  ++   +PD  ++L +PV         R        LD FE  D  + E+  
Sbjct: 120 AWIAELELGALALPVPDLQVLLRIPVGTARAGTLARAGADRGRALDTFES-DDGLQERCA 178

Query: 175 QIFLDIARN---QPDRCHIVD 192
           +++ ++A      P    +VD
Sbjct: 179 RMYEELAARSWVSP--WLVVD 197


>gi|160858058|emb|CAM58346.1| thymidylate kinase [Vaccinia virus Ankara]
          Length = 204

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|302531808|ref|ZP_07284150.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4]
 gi|302440703|gb|EFL12519.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4]
          Length = 571

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 20/222 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE---PGGTPAAEAARHVLLSCGVDE 61
           + I+FEG+ GAGK+T   +L R L+   +   V  +       P A A   +L + G   
Sbjct: 1   MLITFEGLPGAGKSTQSRMLARCLESNGHHATVLPDLATLDTDPVAAALVDLLRTSGDPF 60

Query: 62  F---GAEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGER-----DS 111
                A  + ++ AA R D V  V+ PAL E    I++ DR + +  +Y          +
Sbjct: 61  LRSGDAITDTMITAAIRADLVATVLDPALAENPSAIVIEDRGIHTMASYAIAALLRQHRA 120

Query: 112 SQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              + LD L  I ++        + L +P  +  +R   R      A    F  +     
Sbjct: 121 PAQVALDWLSSITALAGPRTTRALWLRMPPAVAARRAGERGGDHRPA----FTGEQRAHL 176

Query: 171 EKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211
                 +  +A   P    ++D +      +   +   + +L
Sbjct: 177 AWVDHAYALLAERDPQ-LTVLDAADLDPVGIHLAVHAALGQL 217


>gi|18640403|ref|NP_570559.1| CMLV169 [Camelpox virus]
 gi|18483079|gb|AAL73876.1|AF438165_166 thymidylate kinase [Camelpox virus M-96]
          Length = 227

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 24  MSRGALIVFEGLDKSGKTTQCMNIMESILAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 81  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K +                 +DV   +K  Q +  +
Sbjct: 136 KSYEFGLPKPDLVIFL----ESGSKEINKNVGEEIY--------EDVAFQQKVLQEYKKM 183

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223


>gi|56404583|sp|Q80DS7|KTHY_CWPXG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 204

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|56404622|sp|Q8QMQ7|KTHY_CWPXB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 204

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|237740226|ref|ZP_04570707.1| thymidylate kinase [Fusobacterium sp. 2_1_31]
 gi|229422243|gb|EEO37290.1| thymidylate kinase [Fusobacterium sp. 2_1_31]
          Length = 224

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 82/237 (34%), Gaps = 41/237 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGKFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +        + 
Sbjct: 62  TKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDAEAKDEY 121

Query: 120 LQEIS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  +        +   PD  I L +P+D   + ++NR +  +         +   IHE  
Sbjct: 122 LNWLVDLEYKKNEIPEPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173

Query: 174 RQIFLD--------IARN---------QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            + +L         I++          + ++   +      + +   I + + EL++
Sbjct: 174 NEDYLKKSYDNATAISKKYSWCEIECVEDNKIKTI------ERINDEIFSKIEELIK 224


>gi|227550018|ref|ZP_03980067.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227077927|gb|EEI15890.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 201

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 8/190 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-G 63
           + I+ EGI+GAGK T ++ +K  L  +   V   R    +  A+ AR  L     D    
Sbjct: 1   MIIAVEGIDGAGKNTLVNAIKGELGAE--TVAFPRY-ADSIYAQLAREALHGRMGDLVDS 57

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSLQ 121
           A   A +FA  R      +   A    KI++ DR++ S+ AY   R        ++  L+
Sbjct: 58  AHGMATLFALDRAGAKPLLDTFATAPDKIIILDRYVASNAAYTAARTGDDAAARWVFELE 117

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            + +    PD  +++D       +R + R         D +E  D  + +     ++ +A
Sbjct: 118 FVRLGLPRPDLQVLVDTDPAEAGQRARRREEGDAERVRDRYES-DASLQQDTFAAYVRLA 176

Query: 182 RN-QPDRCHI 190
                 R  +
Sbjct: 177 ETGWAGRWVV 186


>gi|22164753|ref|NP_671666.1| EVM147 [Ectromelia virus]
 gi|22123894|gb|AAM92452.1|AF523264_148 EVM147 [Ectromelia virus]
          Length = 227

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 79/221 (35%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 24  MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +   L     
Sbjct: 81  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAPMTLS---- 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 183

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAMHTVTGPVG 223


>gi|56404626|sp|Q8QQ21|KTHY_CAMPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56404634|sp|Q8V2K9|KTHY_CAMPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|19718140|gb|AAG37665.1| CMP166R [Camelpox virus CMS]
          Length = 204

 Score =  106 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESILAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K +                 +DV   +K  Q +  +
Sbjct: 113 KSYEFGLPKPDLVIFL----ESGSKEINKNVGEEIY--------EDVAFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|288917903|ref|ZP_06412263.1| thymidylate kinase [Frankia sp. EUN1f]
 gi|288350692|gb|EFC84909.1| thymidylate kinase [Frankia sp. EUN1f]
          Length = 214

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 80/215 (37%), Gaps = 16/215 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGV 59
           M     I+  G++G+GKTT    L  +L  +          GG P  +A  R +  + G 
Sbjct: 1   MRRRPIIALLGVDGSGKTTQARRLAVWLNGQGVPARYFENAGGRPIWDALARRLDRADGQ 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             FG  A   V A+ R   V   +  + + G++ + DR+    YA    R          
Sbjct: 61  ALFGRRAYVAVEASMRWVAVSRALALSWLTGRVAVMDRYAYCQYAIMRARGDRGE---RR 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++    +   PD    L +P  +  +RV+ R            +R+++       + +  
Sbjct: 118 VRGAFRRFPAPDLVCYLSVPAGLAQRRVEQRGR----------DREELGYLVAFDEAYRS 167

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +         +V +  S + V T +   V  ++ +
Sbjct: 168 LPEASS--FVVVSAEGSSEDVQTALRATVLPVLAR 200


>gi|25027324|ref|NP_737378.1| thymidylate kinase [Corynebacterium efficiens YS-314]
 gi|259506538|ref|ZP_05749440.1| thymidylate kinase [Corynebacterium efficiens YS-314]
 gi|23492605|dbj|BAC17578.1| putative thymidylate kinase [Corynebacterium efficiens YS-314]
 gi|259165958|gb|EEW50512.1| thymidylate kinase [Corynebacterium efficiens YS-314]
          Length = 203

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 10/181 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T +  L   +  +       R      A  AA  +    G     A
Sbjct: 1   MIISIEGIDGAGKNTLVRALTERIDARVIS--FPRYDTSIHAQLAAEALHGRMGDLTDSA 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--QGERDSSQHLFLDSLQE 122
            A A +FA  R D ++ +  P L     LL DR++ S+ AY     RD +   ++  L+ 
Sbjct: 59  HAMATLFALDRHDALDELTAPGL-----LLLDRYVASNAAYTAARLRDDAAATWVAELEF 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +    P   ++LD P D+  +R + R +   +   D +E  D  + E+    +  +A 
Sbjct: 114 GRLGLPRPALQVLLDTPTDLAQERARRREASDGARTRDRYE-TDSGLQERTAAQYRRLAA 172

Query: 183 N 183
            
Sbjct: 173 Q 173


>gi|17975072|ref|NP_536586.1| A49R [Monkeypox virus Zaire-96-I-16]
 gi|17529939|gb|AAL40617.1|AF380138_159 A49R [Monkeypox virus Zaire-96-I-16]
 gi|68449041|gb|AAY97163.1| thymidylate kinase [Monkeypox virus]
 gi|68449243|gb|AAY97364.1| thymidylate kinase [Monkeypox virus]
 gi|323098573|gb|ADX22811.1| thymidylate kinase [Monkeypox virus]
          Length = 204

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|62288454|gb|AAX78482.1| unknown [synthetic construct]
          Length = 253

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 50  MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 106

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 107 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 161

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 162 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 209

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 210 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 249


>gi|56404550|sp|Q76RA8|KTHY_VACCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56404558|sp|Q77TG7|KTHY_VACCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56405064|sp|P68693|KTHY_VACCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|56405065|sp|Q80HT9|KTHY_VACCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|209870290|pdb|2V54|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
           Bound To Tdp
 gi|209870291|pdb|2V54|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
           Bound To Tdp
 gi|209870294|pdb|2W0S|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
           Bound To Brivudin-5'-Monophosphate
 gi|209870295|pdb|2W0S|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase
           Bound To Brivudin-5'-Monophosphate
 gi|62232|emb|CAA34345.1| unnamed protein product [Vaccinia virus]
 gi|222737|dbj|BAA01822.1| 23.2K protein [Vaccinia virus]
 gi|335528|gb|AAA48180.1| putative A48R [Vaccinia virus Copenhagen]
 gi|2772800|gb|AAB96539.1| thymidylate kinase [Vaccinia virus]
 gi|6969848|gb|AAF34060.1| TA59R [Vaccinia virus Tian Tan]
 gi|38349040|gb|AAR18016.1| thymidylate kinase [Vaccinia virus]
 gi|47088489|gb|AAT10559.1| thymidylate kinase [Vaccinia virus]
 gi|111184359|gb|ABH08279.1| HSPV170 [Horsepox virus]
          Length = 204

 Score =  106 bits (265), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|56404530|sp|Q6RZD4|KTHY_RABPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|44971520|gb|AAS49870.1| RPXV157 [Rabbitpox virus]
 gi|167412703|gb|ABZ80137.1| thymidylate kinase [Vaccinia virus GLV-1h68]
          Length = 204

 Score =  105 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|294782678|ref|ZP_06748004.1| dTMP kinase [Fusobacterium sp. 1_1_41FAA]
 gi|294481319|gb|EFG29094.1| dTMP kinase [Fusobacterium sp. 1_1_41FAA]
          Length = 224

 Score =  105 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 86/237 (36%), Gaps = 41/237 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGKFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116
            +      + ++A  R    +       ++  +++ DR++ S+  +Q  +      +  +
Sbjct: 62  TKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDIEAKDEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L+ L ++  ++     PD  I L +P +   + ++NR +  +         +   IHE  
Sbjct: 122 LNWLVDLEYKKNEIPEPDIVIFLKMPTNKAKELMENRKNKIDG-------SEKKDIHE-V 173

Query: 174 RQIFLD--------IARN---------QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            + +L         I++          + ++   +      + +   I + + EL++
Sbjct: 174 NEDYLKKSYDNATAISKKYSWCEIECVENNKIKTI------ERINDEIFSKIEELIK 224


>gi|268323396|emb|CBH36984.1| thymidylate kinase [uncultured archaeon]
          Length = 204

 Score =  105 bits (264), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 94/212 (44%), Gaps = 12/212 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGI+G+GK T   LLK+ L +K + V     P             L   ++   +
Sbjct: 1   MLINFEGIDGSGKRTQSKLLKKELLKKGFKVADFSYPDYDSEYGKLIKGFLEAKLN-LSS 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + + +++    + + E VI+  L +G +++ DR+  S+ AYQ    +  +    ++ ++ 
Sbjct: 60  DEQFLLYLIDIVKNKEEVIQ-KLRKGHVVIMDRYFLSTIAYQSAN-NFDYEVAKAVTKL- 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +Q  +P     +++P+DI  +R   +        +D FE  +     K   ++  + + Q
Sbjct: 117 IQLPLPSVIFYIEIPLDIASRRKSKQ-----KGIVDRFEG-NTEFLTKVVNVYERLIQEQ 170

Query: 185 --PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                   +D       +   IL  + EL+++
Sbjct: 171 FPSSSWIKLDGTEDPGLLNKKILLKLEELIKR 202


>gi|260494279|ref|ZP_05814410.1| thymidylate kinase [Fusobacterium sp. 3_1_33]
 gi|260198425|gb|EEW95941.1| thymidylate kinase [Fusobacterium sp. 3_1_33]
          Length = 223

 Score =  105 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 81/224 (36%), Gaps = 17/224 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59
           G  I  EG + +GK T   LL   +++          P     A     + L+       
Sbjct: 2   GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116
            +      + ++A  R    +       +   +++ DR++ S+  +Q  +   +  +  +
Sbjct: 62  TKVNPYPISTMYAIDRYASFKQDWEKKYIGDYVIITDRYVTSNMVHQASKIKDNEEKDEY 121

Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           L  L ++   +     PD  I L +P+D   + ++NR +  + +        +    +K 
Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181

Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212
            +    I++        ++        S + +   I + + +L+
Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFSKIKDLI 223


>gi|51342318|gb|AAU01362.1| MPXV-WRAIR152 [Monkeypox virus]
 gi|58220622|gb|AAW67910.1| MPXV-SL-152 [Monkeypox virus]
 gi|59858958|gb|AAX09253.1| MPXV-COP-152 [Monkeypox virus]
 gi|68448840|gb|AAY96963.1| thymidylate kinase [Monkeypox virus]
 gi|68449442|gb|AAY97562.1| thymidylate kinase [Monkeypox virus]
 gi|68449642|gb|AAY97761.1| thymidylate kinase [Monkeypox virus]
          Length = 204

 Score =  105 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNIGEEIY-------EDVEFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|56404611|sp|Q8JL72|KTHY_ECTVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 204

 Score =  105 bits (264), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 79/221 (35%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +   L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAPMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAMHTVTGPVG 200


>gi|254822994|ref|ZP_05227995.1| thymidylate kinase [Mycobacterium intracellulare ATCC 13950]
          Length = 210

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 10/181 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T    L    +     V     P  G +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLTEGLLSAFEAAGRSVATLAFPRYGQSVTADIAAEALHGEHGDLA 60

Query: 63  GA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116
            +  A A +FA  R   VE +      +  +++ DR++ S+ AY   R           +
Sbjct: 61  SSVYAMATLFALDRAAAVEQL-EGLRRDHDVVIMDRYVASNAAYTAARLHQDAGGPAVAW 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L+   +    PD  ++L +P ++  +R ++R +       D +ER D  + ++   +
Sbjct: 120 VHGLEYQRLGLPAPDWQVLLAVPAELAGQRARSRAASDPGRARDSYER-DDELQQRTGDV 178

Query: 177 F 177
           +
Sbjct: 179 Y 179


>gi|115433106|ref|XP_001216690.1| thymidylate kinase [Aspergillus terreus NIH2624]
 gi|114189542|gb|EAU31242.1| thymidylate kinase [Aspergillus terreus NIH2624]
          Length = 175

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 15/166 (9%)

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +    +  ++F+A R + V   I   +  G  ++ DR+  S   Y   +  +  L 
Sbjct: 14  GSQSQMDDHSIHLLFSANRWE-VAQSIERDVDNGTTVIVDRYSYSGAVYSAAK-GNPSLS 71

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L    +  V    PD  + L +  +   KR             + +E + +    + R++
Sbjct: 72  LGWAWQPEVGLPRPDLCLFLQITPEEAAKR--------GGFGAERYENETM--QTRVREL 121

Query: 177 FLDIARNQP-DRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPL 219
           F  I   QP     ++D+  SFQ VA ++   V + +    R+ PL
Sbjct: 122 FKTIFDLQPRGDVTVIDAGRSFQDVAQDMRKAVEDRIACLGRIGPL 167


>gi|253744823|gb|EET00963.1| CDC8 [Giardia intestinalis ATCC 50581]
          Length = 264

 Score =  105 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I  EG++ AGK T I  L   L++    V V   P  T  +       L   +D  
Sbjct: 41  RGLLIVVEGLDRAGKDTLIEHLMNLLEQAGESVMVQAFPDRTTKSGIILDRFLRREID-L 99

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                  ++A  R + +E  +  AL+ G  ++C R+  S  AY   +       +    +
Sbjct: 100 SDWDCHELYAENRRE-LEETLCKALLSGTTVICSRYAYSGVAYTAAKGHD----IRKCMK 154

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +  + PD  + LD+             ++R S   + +E        K    F  +  
Sbjct: 155 ADMGLLRPDLIVFLDVDART--------VAMRNSFGKERYE--THDFQVKVYTAFQTLWE 204


>gi|16768438|gb|AAL28438.1| GM04626p [Drosophila melanogaster]
          Length = 171

 Score =  105 bits (262), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 17/171 (9%)

Query: 44  TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
           +   +     L +    +   E   ++F+A R +H+ N ++  L+EG  L+ DR+  S  
Sbjct: 8   SSIGQVINSYLTNSK--DLPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGV 64

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           AY   +     L  D         + PD    L  P         N  + R     + +E
Sbjct: 65  AYSAAKG----LDFDWCYAPERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYE 112

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  V    +  ++F  I   +    H  D+  S + +   I +I  EL+ K
Sbjct: 113 K--VEFQGRVAEVFNRICSKEGSYFHQFDARQSVEDLHAQIASITEELLPK 161


>gi|56713570|gb|AAW23610.1| thymidylate kinase [Vaccinia virus]
 gi|56713854|gb|AAW23892.1| thymidylate kinase [Vaccinia virus]
          Length = 204

 Score =  104 bits (261), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESILSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|322695315|gb|EFY87125.1| thymidylate kinase [Metarhizium acridum CQMa 102]
          Length = 206

 Score =  104 bits (261), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 71/236 (30%), Gaps = 87/236 (36%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI  EG++ +GKTT + LL++                                   
Sbjct: 21  KRGAFIVLEGLDRSGKTTQVKLLEQR---------------------------------- 46

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                              + I+  +  G I++ DRF  S   Y   +  +  L L   +
Sbjct: 47  -------------------DQIKSLVAAGTIVISDRFYHSGIVYSAAK-LNPSLPLSWAR 86

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   PD  + LDL  +    R             + +E+    +  + R++F  ++
Sbjct: 87  APERGLPRPDLVLFLDLDEETARAR--------GGWGGELYEK--AEMQRRVRELFWGLS 136

Query: 182 -----------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                                  R + +   +VD+A S + VA  I   V   V +
Sbjct: 137 MGGKDIQGQEMLAELGGLDGAQWRQEEEDLVVVDAAGSVEEVADRIWATVEGRVAQ 192


>gi|323098770|gb|ADX23007.1| thymidylate kinase [Monkeypox virus]
          Length = 204

 Score =  104 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPXPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|94489660|gb|ABF28748.1| thymidylate kinase [Variola virus]
          Length = 205

 Score =  104 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160

Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
               +     I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGEDIHWQII-SSKFEEDVKKELIKNIVIEAIHTVTGPVG 201


>gi|134102882|ref|YP_001108543.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915505|emb|CAM05618.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338]
          Length = 209

 Score =  104 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 13/192 (6%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVD-EFGAE 65
            EG++GAGK T    L   L R+   V     P       AE     L     D      
Sbjct: 2   IEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAELVAEALRGGHGDLGDSVH 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEI 123
             A+++A  R     + +R  L    ++L DR++ S+ AY   R        F+   +E+
Sbjct: 62  GMAVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDFVAWTEEL 120

Query: 124 SVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            ++      PD  ++L +P ++   R  +R         D FE  D  + E+  +++  +
Sbjct: 121 EIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFES-DASLQERCGEVYAQL 179

Query: 181 ARNQ---PDRCH 189
           A      P R  
Sbjct: 180 AERNWWSPWRVV 191


>gi|291299854|ref|YP_003511132.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
 gi|290569074|gb|ADD42039.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728]
          Length = 204

 Score =  104 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 78/215 (36%), Gaps = 29/215 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  GI+GAGKTT    LKR+L +  + V             + R VL +        ++
Sbjct: 10  IALVGIDGAGKTTQARWLKRWLTQLGHPVRY-------RMVASGRRVLGNTARRLGRPDS 62

Query: 67  EAIV--FAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            A++    A R + +       +   G IL+ DR+    YA                + +
Sbjct: 63  VALLGPGMAIRAETLLRYWNLTVGNGGGILIADRYAVCQYAR---TRVVYPRLEPWARRL 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             +   PD T+ LD+  +    RV+ R            + + V         +  +   
Sbjct: 120 LGRVPPPDLTLYLDVAPETAHLRVKTRG----------IDEEPVDSLAAMDSAYRSL--- 166

Query: 184 QPD--RCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            P+     IVD+    + +A  I + V   + + +
Sbjct: 167 -PEFASFAIVDANRDPEEIAETIRDEVRTALPRLL 200


>gi|312200592|ref|YP_004020653.1| thymidylate kinase [Frankia sp. EuI1c]
 gi|311231928|gb|ADP84783.1| thymidylate kinase [Frankia sp. EuI1c]
          Length = 223

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 13/198 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVLLSC---GV 59
           + ++ EGI+GAGK T    L   L      V     P     P   A R +L        
Sbjct: 1   MIVAIEGIDGAGKNTLTQALVAALTATGRPVSRLAFPRYDVEPLGPAVRAMLTGDQALAP 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114
                 A A++FA  R +    +   A  +  ++L DR++ S+ AY   R          
Sbjct: 61  VAASVRASALLFALDRANAGPELAAAAAGD-AVVLVDRYVASNAAYGAARLSAPERPGFR 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            ++ S++   +    PD  I+L +PV++   R + R +L  S   D +E  D  +  +  
Sbjct: 120 DWVASIELTDLALPRPDLQILLRVPVEVARARARARAALDASRAPDRYEA-DDALQARVA 178

Query: 175 QIFLDIARN-QPDRCHIV 191
             + ++AR+    R   V
Sbjct: 179 TEYDELARSGWIGRWLTV 196


>gi|308160228|gb|EFO62726.1| CDC8 [Giardia lamblia P15]
          Length = 263

 Score =  103 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 79/228 (34%), Gaps = 34/228 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  GLFI  EG++ AGK T I  L   L++    V V   P  T  +       L   +D
Sbjct: 38  ITRGLFIVIEGLDRAGKDTMIDQLVALLKQTGESVMVQAFPDRTTKSGIILDRFLRRELD 97

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                    ++A  R + +E  +   L+ G  ++C R+  S  AY   +       +   
Sbjct: 98  -LSDWDCHKLYAENRKE-LEEGLCNTLLTGTTVICSRYAYSGVAYTAAKGHD----IRRC 151

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E     + PD  + LD+             +LR     + +E ++     K    F  +
Sbjct: 152 MEADKGLLRPDLVVFLDVDAKT--------VALRTDFGKERYETQN--FQIKVYAAFQTL 201

Query: 181 AR--NQPDRCHIVDSAHS-----------FQSVATNILNIVWELVQKR 215
                        D +              ++++     I+  +++++
Sbjct: 202 WGLLRNSQ-----DGSQDGKDCTTLLTFRPENISEAPRQILQAVLERK 244


>gi|270011758|gb|EFA08206.1| hypothetical protein TcasGA2_TC005833 [Tribolium castaneum]
          Length = 242

 Score =  103 bits (259), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 35/223 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  I  EG++ +GK+T    L   L+ +N +  +   P  T +        L     
Sbjct: 33  LKRGALIVVEGVDRSGKSTQCRKLVESLKARNVNAALVTFPDRTTSTGGLIDKYLKQET- 91

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EA  ++F A R +     +   L +G  L+ DR+  S   Y   +   +++ +   
Sbjct: 92  HLCDEAIHLMFTANRWEKKAE-MERLLKQGVTLVVDRYSYSGIVYSSVK---KNMSVKWC 147

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRV---------QNRYSLRESACLDYFERKDVMIHE 171
           QE                  + GL +          +     R +   + +E +   + E
Sbjct: 148 QE-----------------PENGLLKPDLVLLLVLSEAEMVKRPNYGSEIYENR--EMQE 188

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           K  Q F D++    ++  +V +    + V   +L+ V + V +
Sbjct: 189 KVAQAFRDLSER--EKWEVVSADGGVEDVHKELLDKVIKKVSQ 229


>gi|88900791|gb|ABD57703.1| VACV203 [Vaccinia virus]
          Length = 204

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 79/221 (35%), Gaps = 22/221 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MFRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160

Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
                    I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200


>gi|169630674|ref|YP_001704323.1| thymidylate kinase [Mycobacterium abscessus ATCC 19977]
 gi|169242641|emb|CAM63669.1| Probable thymidylate kinase Tmk [Mycobacterium abscessus]
          Length = 212

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61
           G  I+ EG++GAGK T    L      +   V     P  G +  A+ A   L     D 
Sbjct: 2   GQLIAIEGVDGAGKRTLTEKLIARGNSQGLSVATLDFPRYGRSVHADLAAESLKGGHGDV 61

Query: 62  FG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115
              A A  ++FA  R D  + +         +++ DR++ S+ AY   R           
Sbjct: 62  VSSAYAMGLLFALDRRDARDEL-AGLTRSHDLVILDRWVASNAAYGAARLHQDGGGDMAR 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++  L+        PD  + LD+  ++  +R + R         D +ER D  + ++   
Sbjct: 121 WVHQLEYERFGLPHPDWQVFLDVSPELAQQRARQREQQESDRARDTYER-DSDLQQRVSA 179

Query: 176 IFLDIARNQ 184
            + D+A+  
Sbjct: 180 AYADLAQRD 188


>gi|237751787|ref|ZP_04582267.1| thymidylate kinase [Helicobacter bilis ATCC 43879]
 gi|229373153|gb|EEO23544.1| thymidylate kinase [Helicobacter bilis ATCC 43879]
          Length = 214

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 81/223 (36%), Gaps = 39/223 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTREPGGTPAAEAARHVLL 55
            +   EGI+ +GKTT  +L+K+         +       + V  EPG T      R +LL
Sbjct: 2   KYYVIEGIDTSGKTTQCNLIKQNYPCVSLENYKDSIKDSIIVLNEPGSTYLGNLVRKILL 61

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +   ++  ++F A R +    +    +     ++ DR L S  AY    D  + L
Sbjct: 62  DSQT-QINEKSSFLLFLAQRAELF--LQLKNISN--TIIADRSLISGVAYARAIDMREAL 116

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
              +L   +   ++P   + L+   D    R+  +        LD  E+K +      + 
Sbjct: 117 ---NLNLFATGGILPQKIVFLETSKDTLKSRLNAK-------SLDNIEQKGIQYLLDTQS 166

Query: 176 IFLDIAR--------------NQPDRCHIVDSAHSFQSVATNI 204
            F +I                 +PD    +DSA   + +   I
Sbjct: 167 YFKEILAYLQDENFIESNPNIKKPD-ILTLDSAMPKEDIHKRI 208


>gi|9627681|ref|NP_042204.1| hypothetical protein VARVgp160 [Variola virus]
 gi|462468|sp|P33803|KTHY_VAR67 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|439072|gb|AAA60903.1| homolog of vaccinia virus CDS A48R (thymidylate kinase); putative
           [Variola major virus]
 gi|457051|emb|CAA49101.1| J2R [Variola virus]
 gi|516401|emb|CAA47543.1| thymidylate kinase [Variola virus]
 gi|5830722|emb|CAB54761.1| K2R protein [Variola minor virus]
 gi|94483807|gb|ABF22924.1| thymidylate kinase [Variola virus]
 gi|94484011|gb|ABF23127.1| thymidylate kinase [Variola virus]
 gi|94484214|gb|ABF23329.1| thymidylate kinase [Variola virus]
 gi|94484421|gb|ABF23535.1| thymidylate kinase [Variola virus]
 gi|94484623|gb|ABF23736.1| thymidylate kinase [Variola virus]
 gi|94484821|gb|ABF23933.1| thymidylate kinase [Variola virus]
 gi|94485019|gb|ABF24130.1| thymidylate kinase [Variola virus]
 gi|94485217|gb|ABF24327.1| thymidylate kinase [Variola virus]
 gi|94485419|gb|ABF24528.1| thymidylate kinase [Variola virus]
 gi|94485622|gb|ABF24730.1| thymidylate kinase [Variola virus]
 gi|94485824|gb|ABF24931.1| thymidylate kinase [Variola virus]
 gi|94486028|gb|ABF25134.1| thymidylate kinase [Variola virus]
 gi|94486229|gb|ABF25334.1| thymidylate kinase [Variola virus]
 gi|94486432|gb|ABF25536.1| thymidylate kinase [Variola virus]
 gi|94486635|gb|ABF25738.1| thymidylate kinase [Variola virus]
 gi|94486837|gb|ABF25939.1| thymidylate kinase [Variola virus]
 gi|94487040|gb|ABF26141.1| thymidylate kinase [Variola virus]
 gi|94487242|gb|ABF26342.1| thymidylate kinase [Variola virus]
 gi|94487445|gb|ABF26544.1| thymidylate kinase [Variola virus]
 gi|94487648|gb|ABF26746.1| thymidylate kinase [Variola virus]
 gi|94487849|gb|ABF26946.1| thymidylate kinase [Variola virus]
 gi|94488053|gb|ABF27149.1| thymidylate kinase [Variola virus]
 gi|94488656|gb|ABF27749.1| thymidylate kinase [Variola virus]
 gi|94488857|gb|ABF27949.1| thymidylate kinase [Variola virus]
 gi|94489057|gb|ABF28148.1| thymidylate kinase [Variola virus]
 gi|94489257|gb|ABF28347.1| thymidylate kinase [Variola virus]
 gi|94489458|gb|ABF28547.1| thymidylate kinase [Variola virus]
 gi|94489859|gb|ABF28946.1| thymidylate kinase [Variola virus]
 gi|94490268|gb|ABF29353.1| thymidylate kinase [Variola virus]
 gi|109724203|gb|ABG43329.1| thymidylate kinase [Variola virus]
 gi|109724407|gb|ABG43532.1| thymidylate kinase [Variola virus]
 gi|109724610|gb|ABG43734.1| thymidylate kinase [Variola virus]
 gi|109724814|gb|ABG43937.1| thymidylate kinase [Variola virus]
 gi|109725017|gb|ABG44139.1| thymidylate kinase [Variola virus]
 gi|109725222|gb|ABG44343.1| thymidylate kinase [Variola virus]
 gi|109725427|gb|ABG44547.1| thymidylate kinase [Variola virus]
 gi|109725629|gb|ABG44748.1| thymidylate kinase [Variola virus]
 gi|109725833|gb|ABG44951.1| thymidylate kinase [Variola virus]
 gi|109726036|gb|ABG45153.1| thymidylate kinase [Variola virus]
 gi|109726442|gb|ABG45557.1| thymidylate kinase [Variola virus]
 gi|109726646|gb|ABG45760.1| thymidylate kinase [Variola virus]
 gi|745282|prf||2015436GF J2R gene
          Length = 205

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCMNIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160

Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
               +     I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGEDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 201


>gi|167516318|ref|XP_001742500.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779124|gb|EDQ92738.1| predicted protein [Monosiga brevicollis MX1]
          Length = 171

 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 17/176 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59
           MN GL I  EG +  GK+T    L  +L+    +     R P  T    +  +  L   +
Sbjct: 1   MNRGLLIVLEGCDRCGKSTQCGRLVEWLKNHRPNGAESMRFPDRTTQIGSLINQYLRKEI 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    +A  ++F+A R +  +  I   L  G  L+ DR+  S  A+   +     L ++ 
Sbjct: 61  E-LPDKAAHLLFSANRWELRDE-IERKLANGVSLVVDRYAFSGVAFTSAKG----LDVEW 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++      +PD  +++ +  ++     ++R    E    + +E        K ++
Sbjct: 115 CKQPDAGLPVPD--VLIHM--ELSQSEAESRGGFGE----ERYE--VSEFQAKVKE 160


>gi|256070556|ref|XP_002571609.1| thymidylate kinase [Schistosoma mansoni]
 gi|238656754|emb|CAZ27839.1| thymidylate kinase [Schistosoma mansoni]
          Length = 222

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 80/229 (34%), Gaps = 30/229 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCGV 59
             GLF+ FEG+E  GK T   LL+  L +       +   P   TP  +       S G 
Sbjct: 6   KRGLFVVFEGVEKCGKKTQSELLQEALTQITGKQALLIHFPDKSTPIGKLLTEY--SDGK 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLD 118
            +    A  +++ A R +  +  I  AL  G  ++ DR+  S  A    +          
Sbjct: 64  LQLEPHAAHLLYIANRWERQDE-ISSALKAGISVVVDRYSYSGIANTAAKFHPLSEFDWK 122

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             + +    + PD   I  L  +          S+RE+     FE   +   ++    + 
Sbjct: 123 WCRSMEYGLLQPD--FIFCLAPEN-----FAEISVREAFSDKKFE--TMDFQKRILIYYG 173

Query: 179 DIARN--------------QPDRCHIVDSA-HSFQSVATNILNIVWELV 212
            ++R               +P   H + +   +     + I++I+   +
Sbjct: 174 RLSREMESELSENDDTKDHEPRLWHWIPATGQTVDETHSCIMSIIDSKL 222


>gi|262203512|ref|YP_003274720.1| thymidylate kinase [Gordonia bronchialis DSM 43247]
 gi|262086859|gb|ACY22827.1| thymidylate kinase [Gordonia bronchialis DSM 43247]
          Length = 211

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 10/188 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL-SCGVD 60
           G  I+ EG++GAGK T ++ L     R+   V     P  G +  A+ A   L  + G  
Sbjct: 2   GELIAVEGLDGAGKNTLVTGLVDEWTRRGARVATFTFPRYGRSLTADIASEALHGNHGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118
                A A++FA  R   V  +   A     ++L DR++ S+ AY   R    +    + 
Sbjct: 62  RESVYAMALLFALDRSAAVAEIAAAAEAADVVIL-DRYVASNAAYSAARLHQDADGEVVR 120

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + ++    +    PD  I+L +P +  + R ++R S   S   D++ER D  +  +   
Sbjct: 121 WVADLEFGRLGLPAPDRQILLGVPAETAMARAESRASADASRARDHYER-DSDLQHRVDA 179

Query: 176 IFLDIARN 183
           ++  +A  
Sbjct: 180 VYRRLADA 187


>gi|321474134|gb|EFX85100.1| hypothetical protein DAPPUDRAFT_46657 [Daphnia pulex]
          Length = 149

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 72/164 (43%), Gaps = 20/164 (12%)

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               A  ++F+A R + + + I+  L +   ++ DR+ +S  A+   +    ++ L   Q
Sbjct: 4   IDDHAIHLLFSANRWELLPD-IKKLLQKSTNIIVDRYSNSGIAFSAAK---PNMDLRWCQ 59

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD  I L + +     R             + +E  ++ + +  R  +L + 
Sbjct: 60  QSESGLLKPDLVIFLGIDLVEAQTR----------GQYERYE--NLEMQKVVRSNYLKL- 106

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
             Q + C +VD++ S + V  ++  +V E +   ++P S+ K +
Sbjct: 107 --QDETCRVVDASRSMEEVGRDVCRLVQEAL-DNITPDSALKQL 147


>gi|159037580|ref|YP_001536833.1| dTMP kinase [Salinispora arenicola CNS-205]
 gi|157916415|gb|ABV97842.1| dTMP kinase [Salinispora arenicola CNS-205]
          Length = 227

 Score =  102 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 19/212 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---SCGVDEF 62
           FI  EG++G GKTT    L R  +       +        AA+AA  ++        D  
Sbjct: 6   FIVIEGLDGTGKTTVRKGLFRLWEGLYEVTPLCILTSNFLAADAAADIVKGKYQPSADNR 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               +A+   A +   +  ++RPAL   + ++ DR+L S  A+   +   +    ++ + 
Sbjct: 66  DRYLQAL--VADKAATLARLVRPAL-PNRPVISDRWLVSELAFFAVKHDMKPG--ETYER 120

Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++     P D T++LDL     L+R   R      A  D      + +  + RQ++ +I 
Sbjct: 121 LAAGITQPVDLTLVLDLDPRDSLQRAHGRQGDAVRADWDV-----LDVQARVRQVYTEIV 175

Query: 182 ---RNQP--DRCHIVDSAHSFQSVATNILNIV 208
                 P       +D++ S   V   +   +
Sbjct: 176 SEPAAYPLLGEVAHIDASASPGGVLDQVWQAL 207


>gi|94490065|gb|ABF29151.1| thymidylate kinase [Variola virus]
          Length = 205

 Score =  102 bits (255), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSRGALIVFEGLDKSGKTTQCINIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160

Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
               +     I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGEDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 201


>gi|94488256|gb|ABF27351.1| thymidylate kinase [Variola virus]
 gi|94488456|gb|ABF27550.1| thymidylate kinase [Variola virus]
 gi|109726240|gb|ABG45356.1| thymidylate kinase [Variola virus]
          Length = 205

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+ G  I FEG++ +GKTT    +   +      +     P  +          L+    
Sbjct: 1   MSCGALIVFEGLDKSGKTTQCMNIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +      ++F A R +   + I+  L +G  L+ DR+  S  AY   + +S  L     
Sbjct: 58  TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +        PD  I L    + G K + NR    E         +DV   +K  Q +  +
Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160

Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220
               +     I+ S+   + V    I NIV E +     P+ 
Sbjct: 161 IEEGEDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 201


>gi|330469772|ref|YP_004407515.1| thymidylate kinase [Verrucosispora maris AB-18-032]
 gi|328812743|gb|AEB46915.1| thymidylate kinase [Verrucosispora maris AB-18-032]
          Length = 224

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 72/213 (33%), Gaps = 17/213 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT   LL   L    +D    R  GG      AA  +         G +   +
Sbjct: 5   GIDGSGKTTQAQLLADTLTEAGHDATYHRNAGGRRWLGRAAHRLGRPDAQRLLGRDGMLL 64

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEISVQEV 128
           V +  R   +   +  +   G+  + DR+    YA        +    + +   I     
Sbjct: 65  VESVLRWLAIAAALLTSWATGRTAIMDRYAVCQYASLRAHGGRRWERLVRAAYRI---FP 121

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            P  T ++ +      +R++ R +          +++ +         +  +    P   
Sbjct: 122 QPQVTFLMAVDPAEAYRRIERRGT----------DQESLTYLAAADHAYRTL-PEYP-TF 169

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            ++D+A     VA  I   +   +    SP  +
Sbjct: 170 VVIDAARPAHEVAREIRGHLAGWLAAEDSPSGT 202


>gi|227502887|ref|ZP_03932936.1| thymidylate kinase [Corynebacterium accolens ATCC 49725]
 gi|306835486|ref|ZP_07468503.1| thymidylate kinase [Corynebacterium accolens ATCC 49726]
 gi|227076617|gb|EEI14580.1| thymidylate kinase [Corynebacterium accolens ATCC 49725]
 gi|304568652|gb|EFM44200.1| thymidylate kinase [Corynebacterium accolens ATCC 49726]
          Length = 204

 Score =  101 bits (253), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 8/209 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS EGI+GAGK T  + ++  L+     +   R      A  A   +    G     A
Sbjct: 1   MLISIEGIDGAGKNTLATAVRSALEVPVRTIAFPRYETSIHAQLAREALYGKMGDLTDSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSLQE 122
              A +FA  R   ++  +R A    +I++ DR++ S+ AY   R     L  ++  L+ 
Sbjct: 61  YGMATLFALDRFG-IKEELRAAKETREIVILDRYVASNAAYSAARLRDDSLFQWVYDLEF 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++     D  + +D  V++   R Q+R +   +   D++ER D  + E+    +  +  
Sbjct: 120 GTLGLPKADLQVYVDTAVEVASARAQSRAATDSTRERDHYER-DGGLQERTAAAYRRLVE 178

Query: 183 N-QPDRCHIVDSAHSFQSVATNILNIVWE 210
           +    R     +     ++   I ++V +
Sbjct: 179 SGWGGRWI---ATADADTITAAINDLVGD 204


>gi|209965955|ref|YP_002298870.1| thymidylate kinase [Rhodospirillum centenum SW]
 gi|209959421|gb|ACJ00058.1| thymidylate kinase, putative [Rhodospirillum centenum SW]
          Length = 220

 Score =  101 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 81/222 (36%), Gaps = 22/222 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDE-- 61
           + I+ EGI+GAGK T    +   L  +      T  P  G   A      LL+ G +E  
Sbjct: 1   MLIAIEGIDGAGKRTLTDAVATLLAERGLTCSATSFPQYGRTRAARGVQDLLNLGPEELA 60

Query: 62  -FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER-----DSSQH 114
                  A  +A  R +     +   L  G  ++L DR++ S+ AYQ  R          
Sbjct: 61  RIDPREAAAWYALDRFE--SRGLLAGLRAGHDVVLIDRWIASNIAYQRARAPAAEGPGLE 118

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE--SACLDYFERKDVMIHEK 172
            ++ SL+       +PD T+++    +     +  R   R+      D  E  +  +  +
Sbjct: 119 AWILSLETGLYGLPVPDATVLV-ATPETAAADLIRRKGGRDYTDKAFDALEA-NRALQAR 176

Query: 173 RRQIFLDIARN-QPDRCHIV----DSA-HSFQSVATNILNIV 208
               + D+A      R  ++    D        +A  ++  +
Sbjct: 177 VLATYHDLAARGVLGRWIVLHPVRDGTLRPPADLAAEVVAAL 218


>gi|226372878|gb|ACO52064.1| Probable thymidylate kinase 1 [Rana catesbeiana]
          Length = 424

 Score =  101 bits (252), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 24/209 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++  GK+T    LK+ L+       + R P  + +    R            A  
Sbjct: 231 IVIEGLDATGKSTLTESLKQHLKA-----TLLRSPPDSISRW--RKTFDDETSLIKRAYY 283

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL----DSLQ 121
               + AA      + + P       ++ DRF  S+ AY            L      + 
Sbjct: 284 ALSNYVAAVDIAKASEVSP-------VIVDRFWHSTAAYAIATEIGGNIQNLPDHHHVVY 336

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +     + PD  I+L +  +  + R++ R         +  E   +   +K  + +  + 
Sbjct: 337 QWPEDLLKPDLVILLTVSDEERIHRIRKRGLQETQEEKE-LEANSM-FRQKVEEAYRRM- 393

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              P  C ++D+  S ++V  N L+I+  
Sbjct: 394 -ENPG-CVVIDAGASREAVLKNTLSIIKR 420


>gi|75758384|ref|ZP_00738507.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|74494110|gb|EAO57203.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
          Length = 204

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 17/211 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFGAE 65
           I+ EG++ +GK +    L   L  + Y+V  +      TP     R  L   G    G  
Sbjct: 4   IALEGLDKSGKKSQADKLHEALYERGYNVEQSEFHRYDTPTGGLIRQFL--DGEYNPGQL 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A   + AA +   + N       +  +L+ DR+L S   Y            + L  +  
Sbjct: 62  AIECIMAADKYAQL-NWFEELAEKLDVLILDRYLVSQLVYSTANGVDIDFTANLLDRM-- 118

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--N 183
               P+  I LD+  +  +KR             D +E  D  +  + R ++L   +   
Sbjct: 119 --PEPNFQIFLDIEPEESMKRKGK------HGENDKYES-DKELLTRARDLYLRYMKLEE 169

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +     I+D   + + +   IL     L+ +
Sbjct: 170 EDGNAMILDGTLAVEELHQQILERTLSLLTE 200


>gi|207723641|ref|YP_002254039.1| hypothetical protein RSMK01034 [Ralstonia solanacearum MolK2]
 gi|206588844|emb|CAQ35806.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
          Length = 216

 Score =  100 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 27/225 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
                I+FEGI+G+GKTT  +LL   L                P  EA   +    G  +
Sbjct: 7   KRATLITFEGIDGSGKTTAATLLVERLAAHGVKTIFHPNRSLAPVREALDALAQEDGYSD 66

Query: 62  FGAEAEAIVFAAARLDHVENVIR--------PALM-EGKILLCDRFLDSSYAYQGERDSS 112
                   +F A  +  +  V++        P L  E ++++ DR+  +  +      ++
Sbjct: 67  -----RFGLFGAGNMQFLAAVMKWRELLDLRPLLEREDQVVVLDRYFYTHLSLATTHATT 121

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               L  L +I      PD T+ +D+   +  +RV  R   R+   +DY          +
Sbjct: 122 NSAHLRRLFKI---FPTPDITLFMDIDPKLAGERVLKRG--RDVNAVDYL--------AR 168

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
               +  +      +   V    +  +V  +I   V   +   ++
Sbjct: 169 LHDGYQSLPEFDQFQKVAVTGDATPATVLDDIWARVAPKLAHLLA 213


>gi|29841168|gb|AAP06181.1| similar to Chain A, Mutant Human Thymidylate Kinase F105y complexed
           With Dtmp And Appnp [Schistosoma japonicum]
          Length = 219

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           +  GLF+ FEG+E  GK T   LL+  L +       +   P   TP  +         G
Sbjct: 5   IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117
             +    A  ++  A R +  +  I  AL  G  ++ DR+  S  AY   +         
Sbjct: 63  KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              + +    + PD   I  L  +          S+R+S+  + FE   +   ++    F
Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGGNKFE--TMDFQKRVLTYF 172

Query: 178 LDIARN 183
             ++R 
Sbjct: 173 GRLSRE 178


>gi|290958501|ref|YP_003489683.1| thymidylate kinase [Streptomyces scabiei 87.22]
 gi|260648027|emb|CBG71135.1| putative thymidylate kinase [Streptomyces scabiei 87.22]
          Length = 204

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 75/207 (36%), Gaps = 23/207 (11%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG---VDEFG 63
           S +GI+G+GK+T +  +   L            E  G          L            
Sbjct: 3   SIDGIDGSGKSTQVGRVAAALTAAGVRAEPAVVEAFGARTVNTLAERLTGDPYAYHPAIP 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR----FLDSSYAYQGERDSSQHLFLDS 119
            E    VFA       +    P L EG  L+ DR    +  S+ AY G  D        S
Sbjct: 63  VELREWVFACDVAYFTKTRFPPLLAEGITLVWDRGPLSYHASAVAYDGLSDWVGRA--QS 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L         P  T +LDLP +  ++R++ R   R+         + V +  + +   L 
Sbjct: 121 LY------PRPHRTYLLDLPAETAVRRLKERAGKRQRTD------ESVDLLRQVQGHMLG 168

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILN 206
           +A+N+PD   ++D+      +   IL 
Sbjct: 169 MAKNRPD-VVVLDATRDPDEITGQILR 194


>gi|15866136|gb|AAL10206.1|AF410884_2 thimidylate kinase [Mycobacterium avium subsp. paratuberculosis]
          Length = 210

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 79/223 (35%), Gaps = 35/223 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--------PGGTP-------AAEA 49
           + I+ EG++GAGK T    L++  +     V             P   P       A   
Sbjct: 1   MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFRVTGAPVPPTSRPRRCTASTATWR 60

Query: 50  ARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
            R     C     G  A    F A R DH             +++ DRF+ S+ AY   R
Sbjct: 61  CRCTRWRCSSRWTGPGAWGT-FKALRRDH------------HVVIMDRFVASNAAYTAAR 107

Query: 110 --DSSQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
               +    +  +  +    +    PD  ++L +  ++  +R ++R         D +ER
Sbjct: 108 LHQDADGPAVAWVHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYER 167

Query: 165 KDVMIHEKRRQIFLDIARN-QPDRCHIVDSAHSFQSVATNILN 206
            D  + ++   ++  +A         +VD+      +A ++  
Sbjct: 168 -DDGLQQRTGAVYAQLAAAGWGGAWRVVDADVDPARLAADLAA 209


>gi|300779615|ref|ZP_07089471.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030]
 gi|300533725|gb|EFK54784.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030]
          Length = 208

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 8/187 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDE 61
           + ++ EGI+GAGK T +  L R L    +         P    +  A      L   + +
Sbjct: 1   MIVALEGIDGAGKNTLVQKLIRELGATDRIDSAATMAFPRYNESLHAQLAADALHGKMGD 60

Query: 62  FGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFL 117
               A   A++FA  R   V  + + A     +LL DR++ S+ AY   R        ++
Sbjct: 61  LTDSAHGMAVMFALDRYGVVGELWQWASSPSDVLLLDRYVASNAAYTSARTGRIDDRAWV 120

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             L+   +    P   +++D   D    R ++R     S   D +ER D  + +     +
Sbjct: 121 AGLEFDRLGLPRPALQVLVDTAPDTARARARSREQADASRARDRYER-DASLQDATYAAY 179

Query: 178 LDIARNQ 184
            ++A   
Sbjct: 180 AEMAETN 186


>gi|94971971|ref|YP_594011.1| thymidylate kinase-like [Deinococcus geothermalis DSM 11300]
 gi|94554022|gb|ABF43937.1| thymidylate kinase [Deinococcus geothermalis DSM 11300]
          Length = 436

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 80/220 (36%), Gaps = 22/220 (10%)

Query: 3   SGLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +GL ++F G +GAGK++ I    + +    +R            G P+ EA         
Sbjct: 230 TGLCVAFLGPDGAGKSSVIAEVENKVAPAFRRLKRYHLRPSFGRGHPSGEAVSDPHGKAP 289

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                + A+ +++ A         +R  L+   +++ DR+                 +L 
Sbjct: 290 RGSGSSLAKLLLWLADYTVGSVPAVRLPLVRSTLVIFDRYYHDLLVDARRYRYGGPAWLA 349

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L   +V    PD  I LDLP ++   R                    +    + R+ + 
Sbjct: 350 GLVGRAV--PRPDLFIFLDLPAEVAHARKPE---------------VPLEEGRRLRERYR 392

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
            +AR  P+  H+VD+      VA  +  I+   +QKR   
Sbjct: 393 QLARQLPN-AHVVDAERPLDEVAREVETIILHHLQKRTGK 431


>gi|216906057|ref|YP_002333648.1| thymidylate kinase [Abalone shriveling syndrome-associated virus]
 gi|216263150|gb|ACJ71974.1| thymidylate kinase [Abalone shriveling syndrome-associated virus]
          Length = 270

 Score = 99.3 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +FI+ EGI+  GK+T    L+R   +  +  + +T EP          + L      +  
Sbjct: 1   MFITIEGIDKIGKSTVAQGLQRKFSQYSDNSIVLTHEPFNFNG---LSNFLKK---YQLS 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120
           ++ E ++  AAR++H   +I PA+  G I++CDRF+DS+  YQG         L +   L
Sbjct: 55  SKVEILIQTAARIEHATRLINPAISSGSIVICDRFIDSTIVYQGICCCDGISDLAAKHEL 114

Query: 121 QEISVQEV 128
             I    V
Sbjct: 115 NNILTGFV 122


>gi|194211528|ref|XP_001497832.2| PREDICTED: similar to deoxythymidylate kinase (thymidylate kinase)
           [Equus caballus]
          Length = 218

 Score = 99.3 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 16/170 (9%)

Query: 44  TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
           T   +     L     +E    +  ++F+A R + V  +I+  L +G  L+ DR+  S  
Sbjct: 53  TDIGKLLSSYL--EKKNEMENHSVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGV 109

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           AY   +       LD  ++  V    PD  + L L +     R             + +E
Sbjct: 110 AYTSAK---ADFSLDWCKQPDVGLPKPDLVVFLQLQLAEAAMR--------GEFGRERYE 158

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +     E   Q F  +  +      +VD++ S + V   I  +  + +Q
Sbjct: 159 NRT--FQESVSQRFHQLMGDTTLNWKMVDASQSIEDVHKEIRELSEDTIQ 206


>gi|317508027|ref|ZP_07965717.1| thymidylate kinase [Segniliparus rugosus ATCC BAA-974]
 gi|316253689|gb|EFV13069.1| thymidylate kinase [Segniliparus rugosus ATCC BAA-974]
          Length = 209

 Score = 98.9 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 11/187 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62
           + I+ EG++GAGK T  S L    + +   V     P  G +  A+ A   L        
Sbjct: 1   MLITVEGLDGAGKNTLTSALSETWRGRGLRVAKMAFPRYGQSVHADVAAESLRGDFDGRI 60

Query: 63  --GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  A++FA  R +    +    L    ++LCDR++ S+ AY   R         + 
Sbjct: 61  AADPLGMALLFALDRYEAKGEL-EALLGAHDVVLCDRYVASNAAYGAARLGEDATGPFAA 119

Query: 121 QEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             ++     +    PD  ++L  P  +  +R + R +       D +ER D  + E+   
Sbjct: 120 WVLAFEFGRLGLPKPDHQLLLATPPGLAAERARWRAASDPGRERDAYER-DAPLQERVGA 178

Query: 176 IFLDIAR 182
           ++  +A 
Sbjct: 179 VYAGLAE 185


>gi|111220154|ref|YP_710948.1| thymidylate kinase [Frankia alni ACN14a]
 gi|111147686|emb|CAJ59342.1| Thymidylate kinase (dTMP kinase) [Frankia alni ACN14a]
          Length = 214

 Score = 98.6 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 21/203 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVL---LSCGV 59
           + I+ EG++GAGK T    L   L      V     P     P   A R +L        
Sbjct: 1   MIIAIEGVDGAGKNTLTGRLVARLTDAGRSVATLAYPRYDAEPLGPAMRGLLGGDARLAP 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGER-----D 110
                 A A++FA  R        RPAL        +++ DR++ S+ AY   R      
Sbjct: 61  LAAAPRATAMMFALDRAAS-----RPALDALTDANDVVILDRYIASNAAYGAARLPAAER 115

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           +    ++  L+  S+    PD  ++L +PV         R        LD FE  D  + 
Sbjct: 116 AGFPAWVADLELGSLALPAPDLQVLLRVPVAKARAGAAARAGDDPDRPLDAFES-DGGLQ 174

Query: 171 EKRRQIFLDIARNQ-PDRCHIVD 192
           E+  +++ D+A         IVD
Sbjct: 175 ERCARMYEDLAARNWISPWLIVD 197


>gi|82915445|ref|XP_729074.1| thymidylate kinase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485911|gb|EAA20639.1| Thymidylate kinase [Plasmodium yoelii yoelii]
          Length = 146

 Score = 98.6 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 2/109 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI FEG++ +GK+T   L   +L+  N  V     P             L     
Sbjct: 12  LKRGNFIVFEGVDRSGKSTQSKLFVEYLKNNNIQVQHLCFPNRETTIGKIITNYLKMEST 71

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
            F  E   ++F+A R + ++  I+  L+ G  ++CDR   S   Y    
Sbjct: 72  -FSNETIHLLFSANRWEMMDQ-IKNLLINGVWVICDRXXYSGVXYSSGA 118


>gi|330835060|ref|YP_004409788.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4]
 gi|329567199|gb|AEB95304.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4]
          Length = 209

 Score = 97.4 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 28/222 (12%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTPAAEAARHVLLSCGV 59
           G+ I+ EG EG+G+T H++ LK FL+ + Y V        +  G P A   R ++     
Sbjct: 3   GMIIALEGAEGSGRTFHVNSLKSFLEEEGYGVITFGLGLSKLMGEPIARKKRDIV----- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             F      + +     D VENV++P+L  G + + D ++ +  A+   R        + 
Sbjct: 58  --FQRRTLFLAYVTDLADQVENVVKPSLKAGFVAIADGYVSTLMAWGMTRGLEPSWMKEV 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHEKRR 174
           L  +       + ++ L    D  ++R+     LR+   LD F        +  +    R
Sbjct: 116 LNAL----PKSNLSLGLVSSPDEIMRRI-----LRKKGTLDPFSSGIDVCINGELFSSYR 166

Query: 175 QIFLDIARNQPDRCH---IVDSAHSFQSVATNILNIVWELVQ 213
           Q   +   N  +      IVD+  SF+ V   I  IV   ++
Sbjct: 167 QYLENFQTNLIEVMKDGTIVDTGRSFEVVKDEIAKIVGGRLE 208


>gi|302869481|ref|YP_003838118.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
 gi|302572340|gb|ADL48542.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
          Length = 248

 Score = 96.6 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 21/206 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI+G+GKTT    L + L          R  GG          +              +V
Sbjct: 21  GIDGSGKTTQAHRLAQALTAAGRPATYHRNAGGRRWLGRIAQRVGRPDAQRLVGRDGLLV 80

Query: 71  F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISVQEV 128
             +  R   +   +   L+ G+  + DR+    YA        +   L      I     
Sbjct: 81  VESVLRWLAIALALLSCLVTGRTAVMDRWSACQYASIRAHGGQRWERLARAGYRI---FP 137

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD-- 186
            P  T +L +      +R++ R +          + + +         + D+    P+  
Sbjct: 138 APRVTFLLTVDPAEAYRRIERRGT----------DHETMEWLTAAAAAYRDL----PEYG 183

Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212
              +VD     + VA  I   + E +
Sbjct: 184 SFVVVDGTGPPEEVARRIRAHLSEWL 209


>gi|315504056|ref|YP_004082943.1| thymidylate kinase [Micromonospora sp. L5]
 gi|315410675|gb|ADU08792.1| thymidylate kinase [Micromonospora sp. L5]
          Length = 248

 Score = 96.6 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 21/206 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI+G+GKTT    L + L          R  GG          +              +V
Sbjct: 21  GIDGSGKTTQAHRLAQALTAAGRPATYHRNAGGRRWLGRIAQRVGRPDAQRLVGRDGLLV 80

Query: 71  F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISVQEV 128
             +  R   +   +   L+ G+  + DR+    YA        +   L      I     
Sbjct: 81  VESVLRWLAIALALLSCLVTGRTAVMDRWSACQYASIRAHGGQRWERLARAGYRI---FP 137

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD-- 186
            P  T +L +      +R++ R +          + + +         + D+    P+  
Sbjct: 138 APRVTFLLTVDPAEAYRRIERRGT----------DHETMEWLTAAAAAYRDL----PEYG 183

Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212
              +VD     + VA  I   + E +
Sbjct: 184 SFVVVDGNGPPEEVARRIRAHLSEWL 209


>gi|213024834|ref|ZP_03339281.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 68

 Score = 96.6 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 38/68 (55%)

Query: 84  RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG 143
           +PAL +G  ++ DR   S+ AYQG         L +L++  + +  PD T+ LD+  ++G
Sbjct: 1   KPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDVTPEVG 60

Query: 144 LKRVQNRY 151
           LKR + R 
Sbjct: 61  LKRARARG 68


>gi|149411455|ref|XP_001513078.1| PREDICTED: similar to THAP domain-containing protein 4
           [Ornithorhynchus anatinus]
          Length = 670

 Score = 96.6 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 70/176 (39%), Gaps = 15/176 (8%)

Query: 39  REPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
           + P  +          L   ++        ++F+A R + V  +++  L +G  L+ DR+
Sbjct: 498 KYPQRSTEIGKLLSSYLERKIN-LEDHTVHLLFSANRWEQVP-LMKEKLNQGITLIVDRY 555

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
             S  A+   +   ++  LD  ++  V    PD  + L L       R         S  
Sbjct: 556 AFSGVAFTSAK---ENFSLDWCKQPDVGLPKPDLILFLQLSTVEAATR--------GSFG 604

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            + +E  +    EK  Q F  + +++     ++D++ + + +   I ++  E +++
Sbjct: 605 TERYE--NNAFQEKALQSFHKLMKDKTLNWKVIDASKNIEDLHKEIHHLSKEAIKE 658


>gi|301611086|ref|XP_002935074.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Xenopus (Silurana)
           tropicalis]
          Length = 459

 Score = 96.2 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 32/219 (14%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G +  I  EG++  GK+T    L+  L+       + R P             +S   
Sbjct: 259 KKGRYPVIVIEGLDATGKSTLTESLRDCLKA-----TLLRSPPDC----------ISKWR 303

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             F  E   I    +AA        + + ++     ++ DR+  S+ AY    +   +L 
Sbjct: 304 KTFDDEPSLIKRAYYAAGNYIGACEIAKASMDSP--VIVDRYWHSTAAYAIATEIGGNLP 361

Query: 117 L-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                   + +     + PD  I+L +  +  + R++ R         +     + M   
Sbjct: 362 SLPHCGHDIYQWPQDLLRPDLVILLTVSDEERMLRMRGRGLEETKEEKEL--ESNTMFRL 419

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           K  + +  I    P  C I+D++   +SV    LN++ +
Sbjct: 420 KVEEAYKRI--ENPQ-CVIIDASPPKESVLKETLNVIRK 455


>gi|254671909|emb|CBA04216.1| Thymidylate kinase [Neisseria meningitidis alpha275]
          Length = 81

 Score = 96.2 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD T++LD+P+++ + R+        S   D FE++      + R ++L+ A   P+R 
Sbjct: 2   RPDLTLLLDVPLEVSMARIGQ------SREKDRFEQEQADFFMRVRSVYLNRAAACPERY 55

Query: 189 HIVDSAHSFQSVATNILNIV 208
            I+DS  S   V  NI  ++
Sbjct: 56  AIIDSNRSLDEVRNNIEKVL 75


>gi|161407223|ref|YP_638514.2| thymidylate kinase [Mycobacterium sp. MCS]
          Length = 210

 Score = 96.2 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 15/203 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVD-E 61
           + I+ EG++GAGK T  + ++   +     V     P    +  A+ A   L     D  
Sbjct: 1   MLIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLA 60

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116
               A A++FA  R D  +  I        +++ DR++ S+ AY   R     D     +
Sbjct: 61  ESVYAMAVLFALDRADARDE-IAHLAAAHDVVILDRYVASNAAYSAARLHQSADGEAVEW 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + SL+   +     D  I+LD+P  +  +R + R         D +ER D  +  +  ++
Sbjct: 120 VRSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYER-DDGLQRRTGEV 178

Query: 177 FLDIARNQP-DRCHI----VDSA 194
           +  +A      R  +    VD+A
Sbjct: 179 YQALAATDWCGRWIVAGPDVDAA 201


>gi|209515281|ref|ZP_03264148.1| thymidylate kinase [Burkholderia sp. H160]
 gi|209504262|gb|EEA04251.1| thymidylate kinase [Burkholderia sp. H160]
          Length = 238

 Score = 95.9 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 23/231 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVD-- 60
           G+ ++  G++GAGK++ +  L+    R   +   T  P      +   R ++ S      
Sbjct: 18  GVLVTLCGVDGAGKSSLMERLEGACTRAGLNCVTTFTPTRRIRKDEVFRQLVDSHWHTSS 77

Query: 61  --------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
                           +      + H+ + + PAL  G ++ CDR++ +S A  G   S 
Sbjct: 78  SGPDASARRVDMLGILLSIMGDLVQHMSDTVIPALERGDVVFCDRYVFTSQAEIGT-RSD 136

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                  L  I+   + PD    L++      +RV+ R    +           +    +
Sbjct: 137 PAETAPVLHSIAGYLLRPDVAFGLNVSGATSHRRVRARNDENDQPPP-------MSFLMR 189

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW--ELVQKRVSPLSS 221
           +   +  +          +D+  S        L+ +   E V +R   +++
Sbjct: 190 QVAAYRAVFEVNG--VVALDAERSIDETFCAALSHIVAIERVARRSGSMAA 238


>gi|111223133|ref|YP_713927.1| putative thymidylate kinase [Frankia alni ACN14a]
 gi|111150665|emb|CAJ62366.1| putative Thymidylate kinase (dTMP kinase) [Frankia alni ACN14a]
          Length = 263

 Score = 95.9 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 15/213 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I+  G++G GKTT    L R L             GG P  +   R +    G D  G  
Sbjct: 10  IALLGVDGVGKTTQARRLARTLTAAGQPASYFENGGGRPLLDPLARRLGRRDGPDLLGRR 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQEI 123
               V A  R   +   +  + + G+I + DR+    YA  G R   +        ++  
Sbjct: 70  VHVAVEATYRGLAITRALALSRLTGRIAVMDRYTYCQYAVMGLRGDGTGDDDGARRVRAA 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             +  +PD  ++   P  +  +RV+ R    E   LD              + + D+   
Sbjct: 130 YRRFPLPDLVVLFTAPATLAQQRVERRGRDHE--DLDRL----TAF----AEAYRDLPEA 179

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                H + ++ +   V   +  +V E + +R+
Sbjct: 180 AA--FHELPASGTPDEVHAVLYPLVTEALGRRL 210


>gi|326202523|ref|ZP_08192391.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
 gi|325987107|gb|EGD47935.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
          Length = 230

 Score = 95.5 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 30/226 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58
           +G+ I FEGI G GK+  + +L+++L    Y   V             + +    LL+ G
Sbjct: 11  NGMLIVFEGISGCGKSESVRVLRKYLTDNGYKTSVLEWNSNRVIRNIIKRIDSKKLLTPG 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +  F      ++            + P L +  +L+ DR++ +         +   +   
Sbjct: 71  IYSFFQWVSFLIDYLF-------KVLPLLKKNYVLIADRYIYTGLTRDSVNGAGGKIG-R 122

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDY----FERKDVMIHEKR 173
            L       + P     LD+  +   +R++ R   L  +  L       + K++    K 
Sbjct: 123 LLHRFV---IKPTMVFFLDVSPEECDRRIKKRGKDLFHTNKLIRENKLLKNKELYYLNKL 179

Query: 174 RQIFLDI----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           R  +L +    A         V+           ++  V + +  R
Sbjct: 180 RDEYLLLINSKAIQNETNIITVNEDSDI------VVKCVNDYISGR 219


>gi|159039489|ref|YP_001538742.1| thymidylate kinase [Salinispora arenicola CNS-205]
 gi|157918324|gb|ABV99751.1| thymidylate kinase [Salinispora arenicola CNS-205]
          Length = 237

 Score = 95.5 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 64/212 (30%), Gaps = 27/212 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  GI+G+GKTT    L   L          R  GG          L            
Sbjct: 17  IALIGIDGSGKTTQARRLAAALTGAGLPATYHRNAGGRRFLGRVARRLGRPDPQRLLGRT 76

Query: 67  EAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             +V  +  R   +       L+ G++ + DR+    YA        +   L  L     
Sbjct: 77  GLLVAESVLRWLAIAAARLSRLLTGRVAVMDRYSACQYASIRAHGGHRWERLARLGYRV- 135

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-- 183
               P  T +L +      +R++ R +                 HE  R  +L  A    
Sbjct: 136 -FPRPQVTFLLTVDPAEAYRRIERRGTD----------------HESMR--YLTAADRAY 176

Query: 184 ----QPDRCHIVDSAHSFQSVATNILNIVWEL 211
               +     +VD++     V+  I + V   
Sbjct: 177 RTLPEHHTFVVVDASGPADEVSRRIRDHVDGW 208


>gi|325002113|ref|ZP_08123225.1| thymidylate kinase [Pseudonocardia sp. P1]
          Length = 212

 Score = 95.1 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 11/188 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS-CGVD 60
           G  +  EG++GAGK T    L   L+     V     P       AE AR  L    G  
Sbjct: 2   GRLVVIEGLDGAGKRTFAGRLTAALRAGGATVTSAAFPRYDDDVHAELARDALYGRMGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118
                A A++FA  R D    + R +L    ++L DR++ S+ AY   R         + 
Sbjct: 62  ASSVHAMAVLFALDRRDAAAGL-RASLGTHDVVLVDRYVASNAAYNAARLGQDARGEVVG 120

Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++E+ +      +PD  ++L  P             L E+   D +E  D  +  +   
Sbjct: 121 WVRELEIDRFGIPVPDHQLLL-APPRAVAAERARARELTEARQRDAYES-DDALQARTDA 178

Query: 176 IFLDIARN 183
           ++  +A  
Sbjct: 179 VYRQLADA 186


>gi|146303756|ref|YP_001191072.1| thymidylate kinase-like protein [Metallosphaera sedula DSM 5348]
 gi|145702006|gb|ABP95148.1| Thymidylate kinase-like protein [Metallosphaera sedula DSM 5348]
          Length = 210

 Score = 95.1 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 22/220 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGV 59
           G  I+ EG EG+G+T H+S LK +L+ + Y V           G P ++  R ++     
Sbjct: 3   GKIIALEGSEGSGRTYHVSSLKTYLEEQGYGVVTFGLGMSRLMGEPISKKKRDIV----- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             F      + +     D +EN ++P +  G + + D ++ +  A+ G     +  +++ 
Sbjct: 58  --FQRRTLFLAYVTDLADQIENEVKPMVKAGFLAIADGYVSTLKAW-GLARGLEEEWMNY 114

Query: 120 LQEISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRE--SACLDY-FERKDVMIHEKRR 174
           +        +P   + L L       ++R+  +  + +  S+ +D     +    +E   
Sbjct: 115 V-----LSALPHANLSLGLVSSPREIMRRILKKKGVLDPLSSGIDICINGELFSSYETYL 169

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             F D  R       IVD++ +F+ V + I  IV + ++K
Sbjct: 170 NTFQDYLRKVIQNGVIVDTSRNFEVVKSEIATIVGDRIEK 209


>gi|303398720|emb|CBW46701.1| A240L [African swine fever virus Georgia 2007/1]
          Length = 236

 Score = 94.7 bits (235), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 73/207 (35%), Gaps = 27/207 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G+ I+ EGI G GK+T    LK  L+  +Y+      P   T   +    VL      E
Sbjct: 2   RGILIAIEGINGVGKSTQAMKLKETLECMDYNAICIHFPNPDTTTGDLILQVL--NKTIE 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +E    +F   R + +   I   L    I++ DR++ S   Y         + +++  
Sbjct: 60  MSSEQLHKLFTKHRSEFIAE-IAVLLKLNYIVIVDRYIWSGLVYAQA----DGITIET-- 112

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180
                   PD T  L             +    +   L   FE K+    E     F  I
Sbjct: 113 ---KNTFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157

Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206
             + P +R  I+ +  + + +   IL 
Sbjct: 158 MDDVPKNRFCIIPATLNKEIIHMIILT 184


>gi|119867414|ref|YP_937366.1| thymidylate kinase [Mycobacterium sp. KMS]
 gi|108768736|gb|ABG07458.1| thymidylate kinase [Mycobacterium sp. MCS]
 gi|119693503|gb|ABL90576.1| thymidylate kinase [Mycobacterium sp. KMS]
          Length = 229

 Score = 94.7 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 15/202 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVD-EF 62
            I+ EG++GAGK T  + ++   +     V     P    +  A+ A   L     D   
Sbjct: 21  LIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLAE 80

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLFL 117
              A A++FA  R D  +  I        +++ DR++ S+ AY   R     D     ++
Sbjct: 81  SVYAMAVLFALDRADARDE-IAHLAAAHDVVILDRYVASNAAYSAARLHQSADGEAVEWV 139

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL+   +     D  I+LD+P  +  +R + R         D +ER D  +  +  +++
Sbjct: 140 RSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYER-DDGLQRRTGEVY 198

Query: 178 LDIARNQP-DRCHI----VDSA 194
             +A      R  +    VD+A
Sbjct: 199 QALAATDWCGRWIVAGPDVDAA 220


>gi|301775533|ref|XP_002923194.1| PREDICTED: thymidylate kinase-like [Ailuropoda melanoleuca]
          Length = 204

 Score = 94.7 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 19/188 (10%)

Query: 37  VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           + R P  +          L    +     +  ++F+A R + V  +I+  L +G  L+ D
Sbjct: 31  LLRFPERSTEIGKLLSSYLEKKSE-VEDHSVHLLFSANRWEQVP-LIKKKLSQGITLVVD 88

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           R+  S  A+   +   ++  LD  ++  V    PD  + L L +    +R          
Sbjct: 89  RYAFSGVAFTSAK---ENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAARR--------GE 137

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN----IVWELV 212
              + +E  +    E+    F  +  ++     +VD++ S + V   I       +    
Sbjct: 138 FGRERYENGN--FQERALHRFHQLMADETLNWKMVDASKSIEDVHKEIHALSVGAIQAAA 195

Query: 213 QKRVSPLS 220
           Q+ +  L 
Sbjct: 196 QRPLGELW 203


>gi|20093541|ref|NP_613388.1| thymidylate kinase [Methanopyrus kandleri AV19]
 gi|73920824|sp|Q8TZ38|KTHY_METKA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP
           kinase
 gi|19886382|gb|AAM01318.1| Thymidylate kinase [Methanopyrus kandleri AV19]
          Length = 194

 Score = 94.7 bits (235), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 82/227 (36%), Gaps = 42/227 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL++  EGI+G GK++ ++L   FL+    +V   REP      EA          +   
Sbjct: 2   GLYLGVEGIDGVGKSSVVNLAAEFLEIHGLEVTTVREPSTDIGREAL---------EWDD 52

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +A+ F   R+  ++ V         ++L DR   S+ AYQ          +  L E+
Sbjct: 53  PYLQALAFTLDRMLTLKRV---DFEAADVVLSDRTFLSTLAYQSA----LGADMRWLLEL 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                 PD   I+D            R  L E A  D          E+ R  + + AR 
Sbjct: 106 QRPVPKPDVVYIID------------REPLAEDATFDK------EFLERVRNRYREAARL 147

Query: 184 QPDRCHI----VDSAH-SFQSVATNILNIVWELVQKRVSPLSSKKDI 225
             +   +    +++     + +A  I+      +     PL    D+
Sbjct: 148 IEEEFDVEIKWIEAEDMDKEEIAELIVADARRRLDD---PLGIPDDL 191


>gi|239788950|dbj|BAH71126.1| ACYPI007604 [Acyrthosiphon pisum]
          Length = 131

 Score = 94.7 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 4/126 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG + +GKTT  + L   L            P   TP        L      E
Sbjct: 7   RGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYL--SRKIE 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++F+A R + +E  IR  +  G  L+ DR+  S   +   +      +    +
Sbjct: 65  LPDRSVHLLFSANRWE-LEPEIRKQIESGVTLIVDRYSYSGVVFTSAKQCVDFKWCLWAR 123

Query: 122 EISVQE 127
           +   Q 
Sbjct: 124 KWFTQS 129


>gi|238060711|ref|ZP_04605420.1| thymidylate kinase [Micromonospora sp. ATCC 39149]
 gi|237882522|gb|EEP71350.1| thymidylate kinase [Micromonospora sp. ATCC 39149]
          Length = 239

 Score = 94.3 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 17/204 (8%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI+G+GKTT    L   L          R  GG          L     +     +  + 
Sbjct: 8   GIDGSGKTTQAHYLAEALTAAGRPATYHRNAGGRRWLGRIAQRLGRPDAERLVGRSGLLA 67

Query: 71  F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISVQEV 128
             +  R   +   +   L+ G+  + DR+    YA        +   L      I     
Sbjct: 68  VESVLRWLAIAVALVSCLVTGRTAVMDRYSACQYASIRAHGGQRWERLARAGYRI---FP 124

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            P  T +L +      +R++ R +  E+    +    D          +  +    P   
Sbjct: 125 PPQVTFLLAVDPAEAYRRIERRGTDHETMG--WLSAADT--------AYRTL-PEFPS-F 172

Query: 189 HIVDSAHSFQSVATNILNIVWELV 212
            +VD+    + V+  I   +   +
Sbjct: 173 VVVDAGSPPEEVSRQIRAHLAAWL 196


>gi|295681475|ref|YP_003610049.1| thymidylate kinase [Burkholderia sp. CCGE1002]
 gi|295441370|gb|ADG20538.1| thymidylate kinase [Burkholderia sp. CCGE1002]
          Length = 250

 Score = 94.3 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 82/233 (35%), Gaps = 25/233 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVD-- 60
           G+ I+  G++GAGK++ +  L+        +   T  P      +A  R ++ S      
Sbjct: 18  GVLITLCGVDGAGKSSLMKKLESACTGAGLNCVTTFTPTSRIRKDAVFRDMVDSHWHTSK 77

Query: 61  ----------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
                             +      + H+ + + PAL  G ++ CDR++ +S A  G R 
Sbjct: 78  ASLGADASVRRVDMLGILLSIMGDLVQHLTDTVIPALQRGDVVFCDRYVFTSQAEIGTRS 137

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 L  L+ ++   + PD    L++      +RV++R    +           +   
Sbjct: 138 DPAETAL-VLRSVAGHLLRPDVAFGLNVCGATSHRRVRSRNDENDQPPP-------MSFL 189

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW--ELVQKRVSPLSS 221
            ++   +  +          +D   S        L+ +   E V  R   +++
Sbjct: 190 TRQVAAYRAVFEVNG--VVALDGERSIDETYCAALSHIVAIERVAGRFGSIAA 240


>gi|207110221|ref|ZP_03244383.1| thymidylate kinase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 81

 Score = 93.9 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 7/87 (8%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          +++  EG++GAGK+T + LLK   +    +   T+EPGGT   E+ R + L+   +    
Sbjct: 1  MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKIGESLRRIALN---ENISE 53

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK 91
           A A +F + R +HVE+VI+PAL   K
Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKRKK 80


>gi|126433982|ref|YP_001069673.1| thymidylate kinase [Mycobacterium sp. JLS]
 gi|126233782|gb|ABN97182.1| thymidylate kinase [Mycobacterium sp. JLS]
          Length = 229

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 15/202 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLL-SCGVDEF 62
            I+ EG++GAGK T  + ++   +     V     P    +  A+ A   L  S G    
Sbjct: 21  LIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGSHGDLAE 80

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLFL 117
              A A++FA  R D  +  I        +++ DR++ S+ AY   R     D     ++
Sbjct: 81  SVYAMAVLFALDRADARDE-IAHLAAAYDVVILDRYVASNAAYSAARLHQSADGEAVEWV 139

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            SL+   +     D  I+LD+P  +  +R + R         D +ER D  +  +  +++
Sbjct: 140 RSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYER-DDGLQRRTGEVY 198

Query: 178 LDIARNQP-DRCHI----VDSA 194
             +A      R  +    VD+A
Sbjct: 199 KALAATDWCGRWIVAGPDVDAA 220


>gi|220929912|ref|YP_002506821.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10]
 gi|220000240|gb|ACL76841.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10]
          Length = 230

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 20/187 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58
            G+ I FEGI G GK+  +  L+++L  K Y   V          +  + +    LL+ G
Sbjct: 11  KGMLIVFEGISGCGKSESVEALRKYLSDKGYKTSVLEWNSNKIIRKITKAIDSIKLLTPG 70

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           V  F      ++            + P L +  IL+ DR++ +         + + +   
Sbjct: 71  VYSFLQWIGFLIDYFF-------KVVPLLKKNYILIADRYIYTGLIRDSVNGAGRIIG-S 122

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKR 173
            L  I      P     LD+  ++  +R++ R        R        + K++    K 
Sbjct: 123 FLHRIVK---KPAMVFFLDVSPEVCDERIKKRGKALFHTNRLIWENKLLKNKELYYLNKL 179

Query: 174 RQIFLDI 180
           R+ +L +
Sbjct: 180 RREYLLL 186


>gi|159467729|ref|XP_001692044.1| hypothetical protein CHLREDRAFT_94429 [Chlamydomonas reinhardtii]
 gi|158278771|gb|EDP04534.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 167

 Score = 93.2 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I FEGI+  GK+T  SLL   LQ++     + R P  T       +  L      
Sbjct: 48  RRGALIVFEGIDRCGKSTQCSLLLESLQKQGVPAELWRFPDRTTLIGGLINEYLQKKAS- 106

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
               A  ++F A R +  + ++R  L  G  L+ DR+  S  AY   + 
Sbjct: 107 LNDAAVHMLFVANRHEKRDEMLR-LLAGGTTLVLDRYSYSGVAYTAAKG 154


>gi|304314527|ref|YP_003849674.1| hypothetical protein MTBMA_c07660 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587986|gb|ADL58361.1| hypothetical protein MTBMA_c07660 [Methanothermobacter marburgensis
           str. Marburg]
          Length = 214

 Score = 93.2 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 75/223 (33%), Gaps = 35/223 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAA---------- 47
           MN G  +   GI+G+GKTT   L K  LQ  N    +    +    +P            
Sbjct: 1   MNKGKLVCLMGIDGSGKTTIARLFKERLQEMNRIKVEYVWCKFGYYSPLLRKLFCFIGII 60

Query: 48  ---EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSS 102
              +  R +    G +        +      + H   +  +R +L  GK ++CDR+L  +
Sbjct: 61  GKPDKLRGLNSISGNNFKNKIVYNLYLYFLLMTHYLTILNVRISLSLGKTVICDRYLPDT 120

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                   +  +   + L +       PD    + LP  I  +R +          LDY 
Sbjct: 121 LVDLVLEFNQTYEDANKLLKKLYFTPKPDLLFYIRLPSKIAYERKKE-------NSLDYL 173

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205
            RK      K   I+     +  +   ++D   +   +   I 
Sbjct: 174 NRK-----VKIYDIY-----SSKNEVVVLDGTKNPNELLNEIQ 206


>gi|296118803|ref|ZP_06837379.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968292|gb|EFG81541.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306]
          Length = 204

 Score = 93.2 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 5/165 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ EGI+GAGK T +S L++ L      +   R      A  A   +    G     A
Sbjct: 1   MIIAIEGIDGAGKNTLVSQLRKELNIPVEVLAFPRYEDSIHAQLAQEALYGRMGDLTSSA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A +FA  R    +  +  A     +L+ DR++ S+ AY   R       +D + ++ 
Sbjct: 61  YAMATLFALDRHG-AKQQLEEASTSSNLLILDRYVASNAAYSAARLGDD-AVMDWVFDLE 118

Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
              +    PD  I L   V I  +R  +R +   S   D +E+  
Sbjct: 119 FGRLGLPKPDLQIYLATEVGIAAQRASSREAQDASREKDQYEKDG 163


>gi|296393761|ref|YP_003658645.1| thymidylate kinase [Segniliparus rotundus DSM 44985]
 gi|296180908|gb|ADG97814.1| thymidylate kinase [Segniliparus rotundus DSM 44985]
          Length = 205

 Score = 92.4 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 16/211 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F+   G++G+GK+T IS L R    +           G   +E  R  L     ++   
Sbjct: 2   KFVCVTGVDGSGKSTQISALARAFAEQGRAAGRVSIWDGLS-SERMRGALAFRSREDV-Y 59

Query: 65  EAEAIVFAAARLD---HVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDS 119
               ++  AAR     H   V     + G    LL D +    YA +    + +    ++
Sbjct: 60  RYLGMLTPAARAYFLFHALQVSMDLAVAGVWDVLLLDGYWYKYYATEVAHGADR----EA 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++ +++    PD T  L +   +   R   R    ES   D   R+ +    + + +   
Sbjct: 116 VRAMALGFARPDRTFYLTVDPAVATARKACRSDY-ESGYGDA--RRFLDFQRRSQTLLDA 172

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +AR    R   +D     + +   I   + +
Sbjct: 173 LAREH--RWTALDGRSEPEQITRTIFGELQK 201


>gi|302506264|ref|XP_003015089.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371]
 gi|291178660|gb|EFE34449.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371]
          Length = 177

 Score = 92.4 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 13/158 (8%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G  +    A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ +   L
Sbjct: 8   GEIQLDDHAVHLLFSANRWEAAAQ-IRQDIESGITVIVDRYSYSGAVYSAAKENKELQ-L 65

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D      V    PD    L++ ++    R             + +E   + + +K  ++F
Sbjct: 66  DWAWRPEVGLPRPDIWFFLNISIEAAAAR--------GGYGTERYE--TINLQKKVGKLF 115

Query: 178 LDIARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           L +   +  +   +VD+      ++  I   V + + K
Sbjct: 116 LSLTELKGNEDMRVVDAGRGIDEISRQIREEVLQTMAK 153


>gi|255513966|gb|EET90230.1| Thymidylate kinase-like protein [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 240

 Score = 92.4 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 90/231 (38%), Gaps = 32/231 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTREPGGTPAAEAARH 52
                ISFEG+  AGK+  + +L+R             K       +E    P  +    
Sbjct: 6   KKSFLISFEGVGAAGKSLQVDMLRRDPDMQKCMSMKIAKGVSRQSMQE-SLWPFRDRETE 64

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQG 107
            L    + +     + + F AA  ++    ++  L        K+++ DR++D++  +  
Sbjct: 65  RLWVTVLPKVHPGTDMLAFIAAMNENCLT-MKDELASDQDGKLKVIIFDRYIDTALTHAV 123

Query: 108 ERDSSQHLFLD--SLQEISVQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
            R +      D  +++ +             PD TI++D P+++   R   R +   S  
Sbjct: 124 ARAALAGEHEDGPAIKSLFGTFFALKEHIEWPDLTIVIDTPIEVAEGRAMKRENHGYSET 183

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
               +RK     +   + +  +A  +PDR H +D   S + + + I +++ 
Sbjct: 184 ----DRKG---FKTISEAYRKLASYEPDRVHFIDGRKSPEEILSEIKDLIR 227


>gi|167948232|ref|ZP_02535306.1| thymidylate kinase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 78

 Score = 92.4 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
           +LDLPV++GL R   R      +  D FE +     ++ RQ +L IA +QP+R  ++D++
Sbjct: 2   LLDLPVEVGLARAGQR------SAPDRFESEQQHFFQRVRQGYLQIAADQPERVRLIDAS 55

Query: 195 HSFQSVATNILNIVWELVQK 214
                V   I   +   +Q+
Sbjct: 56  LPLAQVQQQISRELERFIQR 75


>gi|47212537|emb|CAF90553.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 166

 Score = 92.4 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 2/97 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I  EG++ AGKTT    L + LQ +     + R P  T A        L    + 
Sbjct: 4  KRGALIVLEGVDKAGKTTQCKKLVQALQERGQPAEMMRFPDRTTAIGQLISAYLENKSE- 62

Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
             +   ++FAA R + V  +I+  L +G  L+ DR+
Sbjct: 63 LTDQTVHLLFAANRWEMVP-LIKKKLQQGTTLVVDRY 98


>gi|147920304|ref|YP_685925.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I]
 gi|110621321|emb|CAJ36599.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I]
          Length = 185

 Score = 92.0 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 28/205 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVDEFG 63
            FI  +G++G+GK T   LLK +L +    + +   P         ++  L+S G  +  
Sbjct: 2   RFIVIDGLDGSGKDTQARLLKEYLAKSGNHIVIRAHPAQDNCLGRISKKALMSHG--QLM 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                + +       V   I         ++  R++ +S AY           +  +  I
Sbjct: 60  RMVATLFYGFD----VIRSILLYCKGDNTVIFVRYIMAS-AY------LPRPIIKPVYAI 108

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + V+P  D    LD+  +  L+RV+ R    E         + +   EK R   L I 
Sbjct: 109 VSR-VLPTSDEMFFLDVAPEEALRRVKARGEAEEMF-------ETLPHMEKVRGRALLIT 160

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
           +       ++D     + V   IL+
Sbjct: 161 KG----WKVIDGNGPPEQVFQRILD 181


>gi|255513756|gb|EET90021.1| thymidylate kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 215

 Score = 91.6 bits (227), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG+ GAGKT   S L   L   N  +  T  PG     E  +   +    +     
Sbjct: 3   FIVVEGVNGAGKTVASSKLAEAL--GNAQIVKTPMPG---FLEELKEYFVRNQENIVARV 57

Query: 66  AEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYA----YQGERDSS--QHLFL 117
                F  A   H  ++IR  L     + ++ DR+  S+ A    Y    + S  +   +
Sbjct: 58  T----FFDAATKHTCDLIRDMLCRDPNRFVIADRYWYSTMASHLAYDRVFNGSKSRDEII 113

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA--CLDYFERKDVMIHEKRRQ 175
           + +       + PD  I++D+  +   +R+  R   R+ A    +  ER  V   E+  +
Sbjct: 114 EIMNISKKYFIRPDLVILIDVDPEERRRRIALRKDGRDDAWHTENADERLFVAFKEEYEK 173

Query: 176 IFLDIARNQPDRCHIVDSAHS-FQSVATNILNIVWELVQKRVS 217
           +F D+ R    +   V++  +     A  I      ++++  +
Sbjct: 174 VFDDL-RKDGTKILKVNNTRTEIDQTAEIIRKATGIMLKRNTA 215


>gi|94970851|ref|YP_592899.1| thymidylate kinase-like [Candidatus Koribacter versatilis Ellin345]
 gi|94552901|gb|ABF42825.1| Thymidylate kinase-like protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 228

 Score = 91.6 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 75/227 (33%), Gaps = 40/227 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFGA 64
            ++F GI+  GK+T I LL   L+ +   V       G TP  +  + +L      +   
Sbjct: 3   LLTFSGIDCCGKSTQIELLMEQLKSRGNAVSYMWLRLGYTPGFQGLKSLLRRVAGKKAAP 62

Query: 65  -----------------EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
                                 +           V R       I++CDR+L  S     
Sbjct: 63  AGNSPQRERFMKQGWKRRLWLYLAIGDMFWQTAVVTRWKRSADIIVICDRYLRDS----- 117

Query: 108 ERDSSQHLFLDSLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           E D + +   D++       +M      PD  +++DL  +  L+R   +      +    
Sbjct: 118 EFDLAMNFPEDTVTRWWSWRLMSALAARPDVALLMDLSFEESLRRSLAKSEPFPDSEDRR 177

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            ER ++      R            + H++D+      +   I+ +V
Sbjct: 178 RERAEM-YRNSVRDG----------QWHVIDATRDIADIHGEIMGLV 213


>gi|284175898|ref|ZP_06389867.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2]
 gi|261602757|gb|ACX92360.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2]
          Length = 205

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 93/219 (42%), Gaps = 28/219 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60
           + I+FEGIEG+GKT+H+   K++L+++ Y V        +  G   A+  R+++      
Sbjct: 1   MIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F      + +     D +EN ++P++  G I L D +  +  ++ G     +  ++D +
Sbjct: 55  -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDV 112

Query: 121 QEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEK 172
             +      P  ++ ++  P +I  + ++ R  L             D FE   +    +
Sbjct: 113 LSM---LPKPSISLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINR 168

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            ++  + I+  +     I+ +   F  V   I+  +  +
Sbjct: 169 FQEALMSISSREN----IIYTDKEFDEVQKEIVRRIDNI 203


>gi|215275164|sp|P0C8G2|KTHY_ASFWA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 239

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 27/207 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G+ I+ EGI G GK+T    LK+ L+  +Y+    R P   T   +    VL    + E
Sbjct: 2   RGILIAIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVL--NKMIE 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +E    +F     + V   I   L    I++ DR++ S  AY         + +++  
Sbjct: 60  MSSEQLHKLFTKHCSEFVAE-IAALLKLNFIVIVDRYIWSGLAYAQA----DGITIET-- 112

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180
                   PD T  L             +    +   L   FE K+    E     F  I
Sbjct: 113 ---KNTFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157

Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206
             + P +R   + +  + + + T IL 
Sbjct: 158 MNDVPKNRLCTIPATLNKEIIHTMILT 184


>gi|215275161|sp|P0C8F9|KTHY_ASFK5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 235

 Score = 90.1 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 25/217 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G+ I+ EGI G  K+T    LK  L+ K YDV     P   T   +    VL    + +
Sbjct: 2   RGILIAIEGINGVEKSTQAIRLKNALENKRYDVIYLHFPSPNTDTGKLILDVL--NKIVK 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +E    +F   R +     I   L    I++ DR++ S  AY         + +D+  
Sbjct: 60  MPSEQLHELFTKHRCEFTAE-IAALLKLNYIVIVDRYIWSGLAYAQA----DRIMIDTKN 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     PD T  L    +  L    N   L      +  E+++++  +     F++I 
Sbjct: 115 TFN-----PDYTFFL--SPNKSL----NEKPLHLQRLYETEEKQEIIFTQ-----FINII 158

Query: 182 RNQP-DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              P ++   + +  + + +   I +   ++ +K ++
Sbjct: 159 NEVPKNKFCAIPANLNKEIIDKIIFSKTIKVFEKNLN 195


>gi|37524928|ref|NP_928272.1| hypothetical protein plu0936 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784354|emb|CAE13231.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 178

 Score = 90.1 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 14/174 (8%)

Query: 49  AARHVLLSCGVD----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
             R +L    +     E G     ++ A+        +I+P L++GKI++CD +     A
Sbjct: 12  KIRDLLWDYDISAPLGELGDRHWILLIASWFAVLDSLIIQPCLLQGKIIICDSWYYKYLA 71

Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
               + +       S   I+     PD  I LD+P  I  KR +      ES  L+  E+
Sbjct: 72  RFLLKSTELAKLSKSALSINT---KPDMVIYLDVPPSIAEKR-KEILKPSESGKLEINEK 127

Query: 165 KD-VMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVW-ELVQKR 215
            D +   +     +        D   I+D+   +  +V  +I++++  E++++R
Sbjct: 128 YDFIEYQKHVLNQYQTF---YDDTWKIIDADTLTKDAVIKSIVDVIQLEILKRR 178


>gi|9628143|ref|NP_042729.1| thymidylate kinase [African swine fever virus]
 gi|1170718|sp|P42490|KTHY_ASFB7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
 gi|402550|emb|CAA79604.1| thymidylate kinase [African swine fever virus]
 gi|780405|gb|AAA65265.1| thymidylate kinase [African swine fever virus]
 gi|162849246|emb|CAN10134.1| Thymidylate kinase [African swine fever virus Benin 97/1]
 gi|162849418|emb|CAN10383.1| Thymidylate kinase [African swine fever virus OURT 88/3]
 gi|291289479|emb|CBH29136.1| BA71V-A240L [African swine fever virus E75]
 gi|1097424|prf||2113434AH thymidylate kinase
          Length = 240

 Score = 89.7 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 74/207 (35%), Gaps = 27/207 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G+ I+ EGI G GK+T    LK+ L+  +Y+    R P   T        VL    + E
Sbjct: 2   RGILITIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGGLILQVL--NKMTE 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +E    +F     +     I   L    I++ D ++ S  AY         + +++  
Sbjct: 60  MSSEQLHKLFTKHHSEFSAE-IAALLKLNFIVIVDHYIWSGLAYAQA----DGITIET-- 112

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180
                   PD T  L             +    +   L   FE K+    E     F  I
Sbjct: 113 ---KNIFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157

Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206
             + P +R  I+ +  + + + T IL 
Sbjct: 158 MNDVPKNRLCIIPATLNKEIIHTMILT 184


>gi|114584339|ref|XP_001161682.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate kinase)
           isoform 2 [Pan troglodytes]
          Length = 169

 Score = 89.3 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 64/223 (28%), Gaps = 62/223 (27%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4   RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                                           + D    S               LD  +
Sbjct: 63  --------------------------------VEDHSNFS---------------LDWCK 75

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +  V    PD  + L L +    KR         +   + +E       E+  + F  + 
Sbjct: 76  QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYENG--AFQERALRCFHQLM 125

Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220
           ++      +VD++ S ++V  +I     + +    +K +  L 
Sbjct: 126 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 168


>gi|15898045|ref|NP_342650.1| thymidylate kinase related protein [Sulfolobus solfataricus P2]
 gi|13814386|gb|AAK41440.1| Thymidylate kinase related protein [Sulfolobus solfataricus P2]
          Length = 208

 Score = 88.9 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 93/219 (42%), Gaps = 28/219 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60
           L I+FEGIEG+GKT+H+   K++L+++ Y V        +  G   A+  R+++      
Sbjct: 4   LIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F      + +     D +EN ++P++  G I L D +  +  ++ G     +  ++D +
Sbjct: 58  -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDV 115

Query: 121 QEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEK 172
             +      P  ++ ++  P +I  + ++ R  L             D FE   +    +
Sbjct: 116 LSM---LPKPSISLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINR 171

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            ++  + I+  +     I+ +   F  V   I+  +  +
Sbjct: 172 FQEALMSISSREN----IIYTDKEFDEVQKEIVRRIDNI 206


>gi|118576712|ref|YP_876455.1| thymidylate kinase [Cenarchaeum symbiosum A]
 gi|118195233|gb|ABK78151.1| thymidylate kinase [Cenarchaeum symbiosum A]
          Length = 186

 Score = 88.9 bits (220), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFGAE 65
           I  EG + AGK T   LL   L RK     V   P   TP  +  +  L   G +     
Sbjct: 8   IVIEGCDQAGKQTQAGLLAGALNRKGRKARVFAFPDYTTPVGKMMKKQLEGRGFE---PR 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + AA R +     IR A   G + + DR+  S+  Y         L    L  +  
Sbjct: 65  VFHCLAAANRWEKAGE-IRAASSGGSVAILDRYRQSNMVY----GVLNGLSRRWLAGLDA 119

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                D  I+LD+      +R
Sbjct: 120 GLPRADVVILLDIKQKEAFRR 140


>gi|198431808|ref|XP_002124573.1| PREDICTED: similar to thymidylate kinase family LPS-inducible
           member [Ciona intestinalis]
          Length = 420

 Score = 88.5 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 35/215 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD-----VHVTREPGGTPAAEAARHVLLSCGVDE 61
           I  EG++  GK+T    L + L           V   R+       +  R    + G   
Sbjct: 224 IVIEGLDATGKSTLTENLAKRLNGCARKSPQDCVLHLRK-TFDSHFQLLRRAYYAIGN-- 280

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF----- 116
                      A     + +       +   ++CDRF  S+ AY    D           
Sbjct: 281 ----------YAFAAQVLHD------AQSGPVVCDRFWHSTAAYAIATDVKVGDETHLPP 324

Query: 117 -LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
               +       + PD  I+L +  ++   R++ R + +    +   E+   +  ++  +
Sbjct: 325 ARHWVYSWPPDLLKPDIVILLTISDELRRCRLEGRNTEKTDEEI-RMEK-SRLFRQRIAE 382

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           ++  +  + P     +D++ S + +    + ++ +
Sbjct: 383 VYKRM--DNPA-LVELDASGSAEELCNKAVELLSD 414


>gi|145596093|ref|YP_001160390.1| thymidylate kinase [Salinispora tropica CNB-440]
 gi|145305430|gb|ABP56012.1| thymidylate kinase [Salinispora tropica CNB-440]
          Length = 236

 Score = 88.5 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 23/207 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI+G+GKTT    L   L          R  GG          L              +V
Sbjct: 31  GIDGSGKTTQAHRLAVALTEVGLPATYHRNAGGRRFLGRVARRLGRPDAQRLLGSTGLLV 90

Query: 71  F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             +  R   +   +    + G++ + DR+    YA        +   +  L         
Sbjct: 91  AESVLRWLAIAAALLGHRLTGRVAVMDRYAACQYASIRAHGGHRWERMARLGYRV--FPQ 148

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEKRRQIFLDIARNQP 185
           P  T +L +      +R++ R +  ES       D                +  +     
Sbjct: 149 PQVTFLLAVDPTEAYRRIERRGTDHESMRYLIAADR--------------AYRSLPEQ-- 192

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212
               +VD+      V+  I   + + +
Sbjct: 193 PTFVLVDADRPADEVSRQIREHLHDWL 219


>gi|222444683|ref|ZP_03607198.1| hypothetical protein METSMIALI_00296 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434248|gb|EEE41413.1| hypothetical protein METSMIALI_00296 [Methanobrevibacter smithii
           DSM 2375]
          Length = 186

 Score = 88.5 bits (219), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 38/213 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63
            FI  +G++G+GK T + LL    +++  +V V   P         ++  LL  G     
Sbjct: 3   KFIVIDGLDGSGKDTQVKLLAEMYEKQGKNVVVRSHPSMDNKYGIKSKEALLKTGKINHL 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                    A R       IR         +L+  R++ S   Y           ++ + 
Sbjct: 63  KATVYFGLDAIRS------IRKYYNNDNIDVLIFSRYIMS-VVY-------LPNVINIII 108

Query: 122 EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
              V  V+P  D    LD+  +  LKR+ NR              ++  + E   +  L+
Sbjct: 109 YKFVSFVLPTSDYMFFLDVSPEESLKRIDNR-------------SEETEMFENMEE--LE 153

Query: 180 IARNQPDR----CHIVDSAHSFQSVATNILNIV 208
            AR +  +     +I+D+ +S   V   I   +
Sbjct: 154 KARIKSKKVTYDWNIIDADNSIAKVNNEIKEKL 186


>gi|255033412|gb|ACT99397.1| unknown [Lactuca sativa]
 gi|255033414|gb|ACT99398.1| unknown [Lactuca sativa]
 gi|255033416|gb|ACT99399.1| unknown [Lactuca sativa]
 gi|255033418|gb|ACT99400.1| unknown [Lactuca sativa]
 gi|255033424|gb|ACT99403.1| unknown [Lactuca sativa]
 gi|255033426|gb|ACT99404.1| unknown [Lactuca sativa]
 gi|255033428|gb|ACT99405.1| unknown [Lactuca sativa]
 gi|255033430|gb|ACT99406.1| unknown [Lactuca sativa]
 gi|255033434|gb|ACT99408.1| unknown [Lactuca sativa]
 gi|255033436|gb|ACT99409.1| unknown [Lactuca sativa]
 gi|255033440|gb|ACT99411.1| unknown [Lactuca sativa]
 gi|255033442|gb|ACT99412.1| unknown [Lactuca sativa]
 gi|255033444|gb|ACT99413.1| unknown [Lactuca sativa]
 gi|255033446|gb|ACT99414.1| unknown [Lactuca sativa]
 gi|255033454|gb|ACT99418.1| unknown [Lactuca sativa]
 gi|255033466|gb|ACT99424.1| unknown [Lactuca sativa]
 gi|255033468|gb|ACT99425.1| unknown [Lactuca sativa]
 gi|255033476|gb|ACT99429.1| unknown [Lactuca sativa]
 gi|255033482|gb|ACT99432.1| unknown [Lactuca sativa]
 gi|255033484|gb|ACT99433.1| unknown [Lactuca sativa]
 gi|255033492|gb|ACT99437.1| unknown [Lactuca serriola]
 gi|255033494|gb|ACT99438.1| unknown [Lactuca sativa]
 gi|255033500|gb|ACT99441.1| unknown [Lactuca sativa]
 gi|255033502|gb|ACT99442.1| unknown [Lactuca sativa]
 gi|255033504|gb|ACT99443.1| unknown [Lactuca sativa]
 gi|255033508|gb|ACT99445.1| unknown [Lactuca sativa]
 gi|255033512|gb|ACT99447.1| unknown [Lactuca sativa]
 gi|255033514|gb|ACT99448.1| unknown [Lactuca sativa]
 gi|255033516|gb|ACT99449.1| unknown [Lactuca sativa]
 gi|255033518|gb|ACT99450.1| unknown [Lactuca sativa]
 gi|255033520|gb|ACT99451.1| unknown [Lactuca sativa]
 gi|255033522|gb|ACT99452.1| unknown [Lactuca sativa]
 gi|255033526|gb|ACT99454.1| unknown [Lactuca sativa]
 gi|255033532|gb|ACT99457.1| unknown [Lactuca serriola]
 gi|255033536|gb|ACT99459.1| unknown [Lactuca sativa]
          Length = 129

 Score = 88.2 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GKT+  + L  +L    Y V   R P   T   +     L +    +
Sbjct: 16  RGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQS--Q 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  +
Sbjct: 74  LDDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG----LDIEWCK 128


>gi|261350780|ref|ZP_05976197.1| dTMP kinase [Methanobrevibacter smithii DSM 2374]
 gi|288860535|gb|EFC92833.1| dTMP kinase [Methanobrevibacter smithii DSM 2374]
          Length = 186

 Score = 88.2 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 38/213 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63
            FI  +G++GAGK T + LL    +++  +V V   P         ++  LL  G     
Sbjct: 3   KFIVIDGLDGAGKDTQVKLLAEMYEKQGKNVVVRSHPSMDNKYGIKSKEALLKTGKINHL 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                    A R       IR         +L+  R++ S   Y           ++ + 
Sbjct: 63  KATVYFGLDAIRS------IRKYYNNDNIDVLIFSRYIMS-VVY-------LPNVINIII 108

Query: 122 EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
              V  V+P  D    LD+  +  LKR+ NR              ++  + E   +  L+
Sbjct: 109 YKFVSFVLPTSDYMFFLDVSPEESLKRIDNR-------------SEETEMFENMEE--LE 153

Query: 180 IARNQPDR----CHIVDSAHSFQSVATNILNIV 208
            AR +  +     +I+D+ +S   V   I   +
Sbjct: 154 KARIKSKKVTYDWNIIDADNSIAKVNNEIKEKL 186


>gi|255033474|gb|ACT99428.1| unknown [Lactuca sativa]
          Length = 129

 Score = 88.2 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GKT+  + L  +L    Y V   R P   T   +     L +    +
Sbjct: 16  RGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQS--Q 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  +
Sbjct: 74  LDDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG----LDIEWCK 128


>gi|255033432|gb|ACT99407.1| unknown [Lactuca sativa]
 gi|255033438|gb|ACT99410.1| unknown [Lactuca sativa]
 gi|255033448|gb|ACT99415.1| unknown [Lactuca sativa]
 gi|255033450|gb|ACT99416.1| unknown [Lactuca sativa]
 gi|255033452|gb|ACT99417.1| unknown [Lactuca sativa]
 gi|255033456|gb|ACT99419.1| unknown [Lactuca sativa]
 gi|255033458|gb|ACT99420.1| unknown [Lactuca sativa]
 gi|255033460|gb|ACT99421.1| unknown [Lactuca sativa]
 gi|255033462|gb|ACT99422.1| unknown [Lactuca sativa]
 gi|255033464|gb|ACT99423.1| unknown [Lactuca sativa]
 gi|255033480|gb|ACT99431.1| unknown [Lactuca sativa]
 gi|255033486|gb|ACT99434.1| unknown [Lactuca sativa]
 gi|255033488|gb|ACT99435.1| unknown [Lactuca sativa]
 gi|255033496|gb|ACT99439.1| unknown [Lactuca sativa]
 gi|255033534|gb|ACT99458.1| unknown [Lactuca sativa]
 gi|255033538|gb|ACT99460.1| unknown [Lactuca sativa]
          Length = 129

 Score = 87.8 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GKT+  + L  +L    Y V   R P   T   +     L +    +
Sbjct: 16  RGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQS--Q 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
                  ++F+A R +   +++   L  G  L+ DR+  S  A+   + 
Sbjct: 74  LDDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG 121


>gi|327261283|ref|XP_003215460.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Anolis
           carolinensis]
          Length = 300

 Score = 87.8 bits (217), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 26/214 (12%)

Query: 3   SGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G F  I  EG++  GKTT  S +K  L      V +   P            +      
Sbjct: 98  KGNFPVIVIEGLDATGKTTVTSAVKDTLNA----VLLRTPPPCVSQWRK----VFDDKPT 149

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--- 117
                  A+       +  +  ++        ++ DR+  S+ AY    ++S  +     
Sbjct: 150 LIRRAFYALTNYIVASEIAKESVKSP------VIVDRYWHSTAAYAIATETSGKVEDLPP 203

Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
               +       + PD  ++L L  D   +R+  R   +     +  E ++    ++  +
Sbjct: 204 PHHPVYCWPKDLLRPDIVLLLTLSSDERSRRLLGRGVEKTREEAE-LE-ENRYFRQRVEE 261

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +  +    P  C  VD++ S + V   +L+++ 
Sbjct: 262 AYRRM--ENPG-CQPVDASPSREKVVKAVLHLIE 292


>gi|300789814|ref|YP_003770105.1| dTMP kinase [Amycolatopsis mediterranei U32]
 gi|299799328|gb|ADJ49703.1| dTMP kinase [Amycolatopsis mediterranei U32]
          Length = 217

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 15/206 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60
           G  +  EG++GAGK T    L   L  K   V     P  G +  A+  R  L     D 
Sbjct: 5   GRLVVIEGLDGAGKRTLTDGLTAALGAKGASVTSLAFPRYGESVHADLVREALHRGHGDL 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118
                  A+++A  R    +  IR       ++L DR++ S+ AY   R         + 
Sbjct: 65  ADSVYGMAMLYALDRSGAADR-IRELRDAHDVVLLDRYVASNAAYAAARLRQDAAGEVVK 123

Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + E+ V       PD  ++L +   +  +R + R         D FE  D  +  +   
Sbjct: 124 WVWELEVDRFGLPRPDAHLLLRVAPAVAAERAERRAETETGRERDAFE-TDDGLQRRCAA 182

Query: 176 IFLDIARN---QPDRCHIVDSAHSFQ 198
           ++ ++A      P   H++D      
Sbjct: 183 VYDELAATGWLAP--WHVLDGVAGVD 206


>gi|70607739|ref|YP_256609.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639]
 gi|68568387|gb|AAY81316.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639]
          Length = 210

 Score = 87.4 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 87/220 (39%), Gaps = 20/220 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I+ EGI  +GKTTH+  L+ +L+ + Y V       G  +++     + S   D
Sbjct: 1   MEKGRIIAIEGIMSSGKTTHVQSLRDYLEDRGYVVTTI----GIQSSKLMADAIASVKRD 56

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             F      + +     D  EN+++P+L  G I++ D ++ +  A+   R   +    + 
Sbjct: 57  IVFQRRTLFLAYVTDLADQTENLVKPSLDSGFIVIADGYVLTLEAWALTRRLER----EW 112

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178
           ++ +         +I L  P    ++R+  R        LD   E  D+ + E     + 
Sbjct: 113 VEGVLSMLPKASLSISLISPPTEIMRRIIKR-----KGFLDPLSESVDLNVKEDTFLAYK 167

Query: 179 DIARNQPDRCH-----IVDSAHSFQSVATNILNIVWELVQ 213
              +            ++ + ++   V   I  +V E ++
Sbjct: 168 KYVKEFQSHLKSISPNVLVTKNNVNEVNREIERLVREELK 207


>gi|255033420|gb|ACT99401.1| unknown [Lactuca sativa]
 gi|255033422|gb|ACT99402.1| unknown [Lactuca sativa]
 gi|255033470|gb|ACT99426.1| unknown [Lactuca sativa]
 gi|255033472|gb|ACT99427.1| unknown [Lactuca sativa]
 gi|255033478|gb|ACT99430.1| unknown [Lactuca sativa]
 gi|255033490|gb|ACT99436.1| unknown [Lactuca sativa]
 gi|255033498|gb|ACT99440.1| unknown [Lactuca sativa]
 gi|255033506|gb|ACT99444.1| unknown [Lactuca sativa]
 gi|255033510|gb|ACT99446.1| unknown [Lactuca sativa]
 gi|255033524|gb|ACT99453.1| unknown [Lactuca sativa]
 gi|255033528|gb|ACT99455.1| unknown [Lactuca sativa]
 gi|255033530|gb|ACT99456.1| unknown [Lactuca sativa]
          Length = 129

 Score = 87.4 bits (216), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I  EG++ +GKT+  + L  +L    Y V   R P    A        L     + 
Sbjct: 16  RGALIVLEGLDRSGKTSQSARLLSYLNNLGYRVESWRFPDRDTAVGKMISSYL-TNQSQL 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 ++F+A R +   +++   L  G  L+ DR+  S  A+   +     L ++  +
Sbjct: 75  DDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG----LDIEWCK 128


>gi|39938860|ref|NP_950626.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
 gi|39721969|dbj|BAD04459.1| thymidylate kinase [Onion yellows phytoplasma OY-M]
          Length = 145

 Score = 86.6 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I+ L+  L+       + +  G +   +  R + L+    +   
Sbjct: 18  KLIVFEGLDGSGKTSLINSLQPHLKN---PYQLYQGLGSSSLGKEIRGLFLN--FQQVDY 72

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
                +  A        +I   L   ++++ DR+L S+YAYQ
Sbjct: 73  LTRFYLSLANMAQIQAELIVSQLKNNQLIILDRWLPSTYAYQ 114


>gi|227826764|ref|YP_002828543.1| thymidylate kinase related protein [Sulfolobus islandicus M.14.25]
 gi|229583934|ref|YP_002842435.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.27]
 gi|238618863|ref|YP_002913688.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4]
 gi|227458559|gb|ACP37245.1| thymidylate kinase related protein [Sulfolobus islandicus M.14.25]
 gi|228018983|gb|ACP54390.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.27]
 gi|238379932|gb|ACR41020.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4]
 gi|323476500|gb|ADX81738.1| thymidylate kinase [Sulfolobus islandicus HVE10/4]
          Length = 205

 Score = 86.6 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGIEG+GKT+H+   K++L+++ Y V            E    V        F  
Sbjct: 1   MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQV---KRNIVFER 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               + +     D +EN + P++  G I L D +  +  ++ G     +  ++D +  I 
Sbjct: 58  RTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDVLSI- 115

Query: 125 VQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEKRRQI 176
                P  ++ ++  P +I  + ++ R  L             D FE   +    + +++
Sbjct: 116 --LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINRFQEV 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + I+  +     I+ +   F  V   I+  +
Sbjct: 173 LMSISSKEN----IIYTDKEFDEVQKEIVRRI 200


>gi|260909078|gb|ACX54176.1| chimeric thymidine kinase/thymidylate kinase [Shrimp white spot
           syndrome virus]
          Length = 262

 Score = 86.6 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 5/128 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +  EG +  GK+T   LL        Y       P  +       +  L+  ++     
Sbjct: 140 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIE-LDDH 198

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A  ++F+A R + V + I+  L +G  ++ DR+  S   +   R       ++       
Sbjct: 199 AAHLLFSANRWE-VCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVD---TVEWCSASDE 254

Query: 126 QEVMPDCT 133
               PD  
Sbjct: 255 GLPQPDLV 262


>gi|229583123|ref|YP_002841522.1| thymidylate kinase related protein [Sulfolobus islandicus
           Y.N.15.51]
 gi|228013839|gb|ACP49600.1| thymidylate kinase related protein [Sulfolobus islandicus
           Y.N.15.51]
          Length = 208

 Score = 85.8 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 94/220 (42%), Gaps = 29/220 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTPAAEAARHVLLS 56
           MN+ L I+FEGIEG+GKT+H+   K++L+++ Y V        +  G    +  R++L  
Sbjct: 1   MNT-LIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIL-- 57

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                F      + +     D +EN + P++  G I L D +  +  ++ G     +  +
Sbjct: 58  -----FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEW 111

Query: 117 LDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVM 168
           +D +  I      P  ++ ++  P +I  + ++ R  L             D FE   + 
Sbjct: 112 IDDVLSI---LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-ID 167

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              + +++ + I+  +     ++ +   F  V   I+  +
Sbjct: 168 YINRFQEVLMSISSKEN----MIYTDKEFDEVQKEIVRRI 203


>gi|215275163|sp|P0C8G1|KTHY_ASFP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase
          Length = 239

 Score = 85.5 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 76/207 (36%), Gaps = 27/207 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G+ I+ EG+   GK+T    LK+ L+  +Y+    R P   T   +    VL    + E
Sbjct: 2   RGILIAIEGVNRVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVL--NKMIE 59

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +E    +F     + V   I   L    I++ DR++ S  AY         + +++  
Sbjct: 60  MSSEQLHKLFTKHCSEFVAE-IAALLKLNFIVIVDRYIWSGLAYAQA----DGITIET-- 112

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180
                   PD T  L             +    +   L   FE K+    E     F  I
Sbjct: 113 ---KNIFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157

Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206
             + P +R  I+ +  + + + T IL 
Sbjct: 158 MNDVPKNRLCIIPATLNKEIIHTMILT 184


>gi|209732338|gb|ACI67038.1| Thymidylate kinase [Salmo salar]
 gi|303659245|gb|ADM15955.1| Thymidylate kinase [Salmo salar]
          Length = 120

 Score = 85.5 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 2/104 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I  EG++ AGKTT  + L + LQ       + + P  T       +  L    + 
Sbjct: 4   RRGALIVLEGVDKAGKTTQCNKLVQALQDSGQKAEMMKFPERTTKIGQLINSYLENKSN- 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
                  ++F+A R + +  +++  L +G  L+ DR+  S  A+
Sbjct: 63  LEDHTVHLLFSANRWELMP-LMKEKLEQGISLVVDRYAFSGVAF 105


>gi|163784586|ref|ZP_02179432.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880147|gb|EDP73805.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 51

 Score = 85.5 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 31/50 (62%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           G+FI+FEGIEGAGK+T    L  +L  K  +  +TREPGGT   +  R 
Sbjct: 2  KGVFITFEGIEGAGKSTQAKKLYEYLISKGKNAVLTREPGGTKTGKKIRE 51


>gi|148642137|ref|YP_001272650.1| thymidylate kinase [Methanobrevibacter smithii ATCC 35061]
 gi|148551154|gb|ABQ86282.1| thymidylate kinase [Methanobrevibacter smithii ATCC 35061]
          Length = 186

 Score = 85.1 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 42/215 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63
            FI  +G++G+GK T + LL    +++  +V V   P         ++  LL  G     
Sbjct: 3   KFIVIDGLDGSGKDTQVKLLAEMYEKQGKNVVVRSHPSMDNKYGIKSKEALLKTGKINHL 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                    A R       IR         +L+  R++ S   Y           ++ + 
Sbjct: 63  KATVYFGLDAIRS------IRKYYNNDNIDVLIFSRYIMS-VVY-------LPNVINIII 108

Query: 122 EISVQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              V  V+P  T      LD+  +  LKR+ NR              ++  + E   +  
Sbjct: 109 YKFVSFVLP--TSEYMFFLDVSPEESLKRIDNR-------------SEETEMFENMEE-- 151

Query: 178 LDIARNQPDR----CHIVDSAHSFQSVATNILNIV 208
           L+ AR +  +     +I+D+ +S   V   I   +
Sbjct: 152 LEKARIKSKKVTYDWNIIDADNSIAKVNDEIKEKL 186


>gi|227829398|ref|YP_002831177.1| thymidylate kinase related protein [Sulfolobus islandicus L.S.2.15]
 gi|229578186|ref|YP_002836584.1| thymidylate kinase related protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|284996769|ref|YP_003418536.1| thymidylate kinase related protein [Sulfolobus islandicus L.D.8.5]
 gi|227455845|gb|ACP34532.1| thymidylate kinase related protein [Sulfolobus islandicus L.S.2.15]
 gi|228008900|gb|ACP44662.1| thymidylate kinase related protein [Sulfolobus islandicus
           Y.G.57.14]
 gi|284444664|gb|ADB86166.1| thymidylate kinase related protein [Sulfolobus islandicus L.D.8.5]
          Length = 205

 Score = 85.1 bits (210), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGIEG+GKT+H+   K++L+++ Y V            E    V        F  
Sbjct: 1   MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQV---KRNIVFER 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               + +     D +EN + P++  G I L D +  +  ++ G     +  ++D +  I 
Sbjct: 58  RTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDVLSI- 115

Query: 125 VQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEKRRQI 176
                P  ++ ++  P +I  + ++ R  L             D FE   +    + +++
Sbjct: 116 --LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINRFQEV 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + I+  +     ++ +   F  V   I+  +
Sbjct: 173 LMSISSKEN----MIYTDKEFDEVQKEIVRRI 200


>gi|323473846|gb|ADX84452.1| thymidylate kinase related protein [Sulfolobus islandicus REY15A]
          Length = 205

 Score = 84.7 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+FEGIEG+GKT+H+   K++L+++ Y +            E    V        F  
Sbjct: 1   MIIAFEGIEGSGKTSHLEATKKYLEKQGYGIITFGLQKSKLLGERITQV---KRNIVFER 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               + +     D +EN + P++  G I L D +  +  ++ G     +  ++D +  I 
Sbjct: 58  RTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDVLSI- 115

Query: 125 VQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEKRRQI 176
                P  ++ ++  P +I  + ++ R  L             D FE   +    + +++
Sbjct: 116 --LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINRFQEV 172

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + I+  +     I+ +   F  V   I+  +
Sbjct: 173 LMSISSKEN----IIYTDKEFDEVQKEIVRRI 200


>gi|315426522|dbj|BAJ48153.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum]
          Length = 218

 Score = 84.7 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 83/223 (37%), Gaps = 27/223 (12%)

Query: 10  EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           EG++G+GKTT +  +   L  K + V   + P  +P        +      E       +
Sbjct: 5   EGVDGSGKTTLMKAVVNKLAEKGHGVETYKTPSSSPTG---IFAVQHGNRPETDPLTRML 61

Query: 70  VFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAY----------QGERDSSQHLFL 117
           +F A   D    VI+  + E K   ++ DR+   S  Y          +G  D     F+
Sbjct: 62  LFLANTSDDSA-VIKKIIEEKKPDYMMIDRYSLCSVVYGFALWSRRFGRGVEDMLFTRFI 120

Query: 118 DSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE---KR 173
           + ++ +       PD T+++++  +      + R + +++   D     D  + +   K 
Sbjct: 121 EIVETLGENVFAKPDLTVVVEVDEET-----RRRRTAQKTGTSDRVLEVDEELQKLVSKY 175

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             ++L       +   + +       +A  +   +  L + R+
Sbjct: 176 YDVYLSW--RPGETVKVFNGDSMLDELANTLAEKLVYLREARL 216


>gi|254495912|ref|ZP_05108821.1| putative thymidylate kinase [Legionella drancourtii LLAP12]
 gi|254354894|gb|EET13520.1| putative thymidylate kinase [Legionella drancourtii LLAP12]
          Length = 203

 Score = 84.7 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 81/217 (37%), Gaps = 25/217 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHV 53
           M +   I   G +G+GKTT  + L++ L+ + Y V        + +     P  +     
Sbjct: 1   MKT---IVIAGADGSGKTTLCNALEKSLRLQGYKVEVATIWDILDKNLFIAPVNKQGIAK 57

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            L        A +  +  + A+  HV     P     +IL+ + +    Y        + 
Sbjct: 58  YLQ--TLSCHARSLFLFHSMAQAIHVAQKENP-----QILVINSYWYKYYI-SEILHGAL 109

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              +D++ +I      P+    LD+     LKR +           D  E+  +   +K 
Sbjct: 110 RDDVDAMVKI---FPKPNLVYYLDISPVTSLKRKEVISGYESGYERDK-EKGFLTFQKKA 165

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +Q +  I   QP+    +D++ S + +A  +   + +
Sbjct: 166 QQEWDKI--KQPN-WKNLDTSLSIEDLARTVFEDIQK 199


>gi|39938558|ref|NP_950324.1| hypothetical protein PAM_072 [Onion yellows phytoplasma OY-M]
 gi|39721667|dbj|BAD04157.1| hypothetical protein [Onion yellows phytoplasma OY-M]
          Length = 129

 Score = 84.3 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 5/119 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FE ++G+GKT+ I  L+  L+         +  G +   +  R + L+    +   
Sbjct: 2   KLIVFEVLDGSGKTSLIHALQPQLKA---PFQTYQGLGSSSLGKEIRDLFLN--FSQVDY 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                +  A    +   +I P L   ++++ DR+L S+YAYQ    S +   L  L++I
Sbjct: 57  LTRFYLSLANMTQNQVELIVPQLKNNQLIILDRWLPSTYAYQLFPFSKEKKQLLPLKKI 115


>gi|157116912|ref|XP_001652905.1| Thymidylate kinase, putative [Aedes aegypti]
 gi|108883433|gb|EAT47658.1| Thymidylate kinase, putative [Aedes aegypti]
          Length = 181

 Score = 84.3 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 18/184 (9%)

Query: 30  RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89
           R  +       P  +    A  +  L+   D F  EA  ++F   R +  +N +   L  
Sbjct: 5   RAGHKAKFMNFPDRSTQFGALINSYLTSK-DNFTDEAIHLLFTLNRWE-AKNEMERLLRS 62

Query: 90  GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149
           G  L+ DR+  S  A+   +     L +D  +        PD  ++L L  +   KR   
Sbjct: 63  GVTLIVDRYSYSGVAFSAAKG----LNMDWCKAPETGLPKPDLVLLLTLTAEAMAKR--- 115

Query: 150 RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     + +E     + +K  + F  +         +VD+     +++  +  +V 
Sbjct: 116 -----GGFGQERYE--VPELQKKVMEKFHTL--KDDSYWKVVDADKKEDALSLELCEMVL 166

Query: 210 ELVQ 213
           + ++
Sbjct: 167 DSME 170


>gi|315504847|ref|YP_004083734.1| thymidylate kinase (dtmp kinase) [Micromonospora sp. L5]
 gi|315411466|gb|ADU09583.1| putative thymidylate kinase (dTMP kinase) [Micromonospora sp. L5]
          Length = 220

 Score = 83.9 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 63/200 (31%), Gaps = 16/200 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGV 59
           M   + I+  G++G+GKTT    L   L+ +          GG P      R +  + G+
Sbjct: 1   MGRPVMIALIGVDGSGKTTQARALAARLREQGVRARYFENAGGRPLWNRLARALGRADGM 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             FG      + A  R   +   +  A + G++ + DR+          R       + +
Sbjct: 61  ALFGRTVYPALEATVRAAAMARTVAVARLTGQVAVLDRWTWCQDVIMAARGDRGRRAVRA 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +  +      P     L     +  +RV  R            + +++         +  
Sbjct: 121 VYAV---FPRPAVVCFLATSPGVAQRRVAARG----------IDTEELAHLRALDGAYRA 167

Query: 180 IARNQPDRCHIVDSAHSFQS 199
           +   +      +D   +   
Sbjct: 168 L--PEFGSFVTLDGDGTPDE 185


>gi|302558329|ref|ZP_07310671.1| thymidylate kinase [Streptomyces griseoflavus Tu4000]
 gi|302475947|gb|EFL39040.1| thymidylate kinase [Streptomyces griseoflavus Tu4000]
          Length = 212

 Score = 83.9 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 39/218 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EGI G GK+T   +L + L+  +            P                  A 
Sbjct: 20  FIILEGISGIGKSTLARILTQRLEAGSLHTVPDFYMPWAPV---------------MNAN 64

Query: 66  AEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A+    F  + + H  ++I   L  G  ++ DR++ S  AY           +  L  
Sbjct: 65  TRALPQFAFYLSGVLHASDIICGHLEHGP-VVSDRYVSSVLAYHSAVHELDMAQVAEL-- 121

Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESAC-----LDYFERKDVMIHEKRR 174
           ++        PD T  L         R+  +    +            E        + R
Sbjct: 122 LAPFRPYLCAPDHTFYLRCTDRTLRTRMAGKKDYNQDDHDMITVPGRLE--------RLR 173

Query: 175 QIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWEL 211
             F ++A   P    I+++   +   +A  I   + EL
Sbjct: 174 SNFDEVAAGDPTG-VIIETDDRTPGELADAITAHLTEL 210


>gi|70951454|ref|XP_744966.1| thymidylate kinase [Plasmodium chabaudi chabaudi]
 gi|56525131|emb|CAH77574.1| thymidylate kinase, putative [Plasmodium chabaudi chabaudi]
          Length = 129

 Score = 83.9 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 81  NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPV 140
           + I+  L+ G  ++CDR+  S  AY            +         + PD    L+LP 
Sbjct: 1   DEIKNLLINGTWVVCDRYAYSGVAYSSGALKLPK---EWCMNPDKGLIKPDAVCYLNLPP 57

Query: 141 DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
           +    R     S       + FE     + ++  + +   +    D    +D+  S Q +
Sbjct: 58  NHAQNR-----SEYGKEIYEKFE-----VQKRIYEAYEHFSNE--DYWINIDATKSIQEI 105

Query: 201 ATNILNIV 208
              I+  +
Sbjct: 106 HNTIVEEI 113


>gi|296138803|ref|YP_003646046.1| thymidylate kinase [Tsukamurella paurometabola DSM 20162]
 gi|296026937|gb|ADG77707.1| thymidylate kinase [Tsukamurella paurometabola DSM 20162]
          Length = 213

 Score = 83.5 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 15/214 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61
           G  ++ EG++GAGK T    + + L  +   V     P  G +  A+ A   L     D 
Sbjct: 2   GTLVAVEGLDGAGKNTLTRAVTQRLTDRGLTVAALAFPRYGRSIHADLAAEALHGGHGDA 61

Query: 62  F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-----L 115
                   ++FA  R    +  IR  L    ++L DR+  SS AY   R           
Sbjct: 62  TASVYGMGLLFALDRRGAADE-IRGLLAGHDVVLLDRYAASSAAYSAARLGEDAHGAVAT 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++  L+       +PD  + LD+PV +   R + R +   +   D +E+ D  +  +   
Sbjct: 121 WVRELEFERFGVPVPDLQVYLDVPVAVAAARAKGREAHDATRARDVYEK-DAGLQARTGA 179

Query: 176 IFLDIARNQ---PDRCHIVDSAHSFQSVATNILN 206
           ++  +A  Q   P R H VD   + + +A  I N
Sbjct: 180 VYAGLAAAQWVSPWRVHGVD--DAPELLADAIAN 211


>gi|126660079|ref|ZP_01731200.1| hypothetical protein CY0110_12342 [Cyanothece sp. CCY0110]
 gi|126618676|gb|EAZ89424.1| hypothetical protein CY0110_12342 [Cyanothece sp. CCY0110]
          Length = 126

 Score = 83.5 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 55/132 (41%), Gaps = 12/132 (9%)

Query: 79  VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL 138
           V+ V +    +   ++  R+  SS AY    +S+     + + E++ +   PD  I LD+
Sbjct: 4   VDGVYKLIQQDHCHVIATRYYFSSLAY----NSNNQEEFNFVYELNQRFPNPDIVIYLDI 59

Query: 139 PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198
            VDI L R++N          +          ++ ++ +  I ++       +D  +S  
Sbjct: 60  SVDIALSRLENAVYKEVYETKEKL--------QQVKKNYDKIFQSYEGDILTIDGNNSIG 111

Query: 199 SVATNILNIVWE 210
            +   I++ + +
Sbjct: 112 KIQQEIISYLEK 123


>gi|331698936|ref|YP_004335175.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190]
 gi|326953625|gb|AEA27322.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190]
          Length = 214

 Score = 83.5 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 9/173 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC-GVD 60
           G  +  EG++GAGK T    L   L            P       AE AR  L    G  
Sbjct: 2   GRLVVIEGLDGAGKRTLTDGLCAALDAAGASTARLAFPRYDDDVHAELARDALYGRLGDL 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118
                  A++FA  R   V  V+   L    +L+ DR++ S+ AY   R         + 
Sbjct: 62  SDSVHGMAVLFALDRRAAVP-VLADLLAAHDVLIVDRYVASNAAYNAARLHQDASGEVVA 120

Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            ++E+ +      +PD  ++L +P  +   R   R         D +E  D +
Sbjct: 121 WVRELEIERFGLPVPDLQLLLQVPQSVAAARAAGRARTEAGRDRDAYESDDAL 173


>gi|329940407|ref|ZP_08289688.1| hypothetical protein SGM_5180 [Streptomyces griseoaurantiacus M045]
 gi|329300468|gb|EGG44365.1| hypothetical protein SGM_5180 [Streptomyces griseoaurantiacus M045]
          Length = 230

 Score = 83.2 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 22/213 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARHVL- 54
           G  I+F G +GAGK+T  + L + L    +   +         R+P  +   +    ++ 
Sbjct: 12  GKLITFVGGDGAGKSTLAARLHQALNDAGHTAVLIGKHSTDVRRDPELSAYLDRLNELVY 71

Query: 55  -LSCGVDEFGAEAEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               GV +   +   ++  A+     +  VI+PAL  G  ++ D       A        
Sbjct: 72  RRDAGVAQACGDHYWLLALASWYTLQDRLVIQPALAAGTHVILDNAHHKILARYAVNPEV 131

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                   +++      PD    L++     L R  +  SL                  +
Sbjct: 132 SPRL---CEQVFAHLTKPDLVFFLNIGAREALVRKGSFTSLEAGHAG-----GGDEDFIR 183

Query: 173 RRQIFLDIARNQPDR--CHIVD-SAHSFQSVAT 202
            +   LD  R Q +R     +D +      V  
Sbjct: 184 YQDTVLDQMREQAERGAWLTLDVAQLDRDQVFK 216


>gi|302868681|ref|YP_003837318.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
 gi|302571540|gb|ADL47742.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029]
          Length = 220

 Score = 82.8 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 16/200 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59
           M   + I+  G++G+GKTT    L   L+ +          GG P        L  + G 
Sbjct: 1   MGRPVMIALIGVDGSGKTTQARALAARLREQGIRARYFENAGGRPLWNRLAQALGRADGT 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             FG      + A  R   +   +  A + G++ + DR+          R       + +
Sbjct: 61  ALFGRTVYPALEATVRAAAMARTVAVARLTGRVAVLDRWTWCQDVIMAARGDRGRRAVRA 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +  +      P     L     +   RV  R            + +++         +  
Sbjct: 121 VYAV---FPRPAVVCFLATSPGVAQWRVAARG----------IDTEELAHLRALDAAYRA 167

Query: 180 IARNQPDRCHIVDSAHSFQS 199
           +   +      +D   +   
Sbjct: 168 L--PEFGSFVTLDGDGTPDE 185


>gi|226471244|emb|CAX70703.1| Thymidylate kinase [Schistosoma japonicum]
          Length = 132

 Score = 82.8 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 5/111 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58
           +  GLF+ FEG+E  GK T   LL+  L +       +   P   TP  +         G
Sbjct: 5   IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
             +    A  ++  A R +  +  I  AL  G  ++ DR+  S  AY   +
Sbjct: 63  KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAK 112


>gi|254827258|ref|ZP_05231945.1| thymidylate kinase [Listeria monocytogenes FSL N3-165]
 gi|258599640|gb|EEW12965.1| thymidylate kinase [Listeria monocytogenes FSL N3-165]
          Length = 77

 Score = 82.4 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M + +FI+ EG +G+GKTT  +LL + +     D   TREPGG+P +E  R+++L  G +
Sbjct: 1  MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59

Query: 61 EFGAE 65
          E  ++
Sbjct: 60 EMDSK 64


>gi|296394614|ref|YP_003659498.1| thymidylate kinase [Segniliparus rotundus DSM 44985]
 gi|296181761|gb|ADG98667.1| thymidylate kinase [Segniliparus rotundus DSM 44985]
          Length = 209

 Score = 82.4 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 11/187 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS--CGVD 60
           + I+ EG++GAGK T    L    + +   V     P  G +  A+ A   L     G  
Sbjct: 1   MLITVEGLDGAGKRTITDALSAVWRAQGRSVAQMAFPRYGQSAHADLAAESLRGAFGGRI 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLD 118
                A  ++FA  R +    +    L    I+LCDR+  S+ AY   R        F  
Sbjct: 61  AADPLAMGLLFALDRHEAKGEL-AALLGSHDIVLCDRYAASNAAYGAARLGEDAAGPFAS 119

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + E     +    PDC ++L  P  +  +R ++R +       D +ER D  + E+   
Sbjct: 120 WVFEFEFGRLGLPEPDCQLLLATPAGLAAERARSRAAADPGRARDAYER-DGELQERVGA 178

Query: 176 IFLDIAR 182
           ++  +A 
Sbjct: 179 VYGGLAA 185


>gi|91792525|ref|YP_562176.1| thymidylate kinase-like protein [Shewanella denitrificans OS217]
 gi|91714527|gb|ABE54453.1| Thymidylate kinase-like protein [Shewanella denitrificans OS217]
          Length = 217

 Score = 82.4 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 31/217 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHV------LLS 56
           + I+  G +G GK+T   LL + +                 T     +R +      +  
Sbjct: 1   MLIALTGADGVGKSTVSKLLLQEVAHHGKRFKTLDRWNMLDTSLFPQSRFISAPLPEVKQ 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           C  +  G      +F    +  V     PA     I   D +     A +      +   
Sbjct: 61  CVAEMEGPSR--FLFILWTIYGVLESYDPA--SPHITFIDSYWMKHAAAEVAYGLPEKFV 116

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVMI- 169
           L+ ++ +      PD TI+LDL  ++  +R +        A L+Y+E      R      
Sbjct: 117 LNIIELL----PKPDLTILLDLSPELAYERKEK----SGFADLNYYECGMDKTRSYNSFI 168

Query: 170 --HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
               K R   L  A    ++ H +D++   + VA  +
Sbjct: 169 QHQSKIRSQLLCWA--DSNKWHKIDTSRPVEEVAAAV 203


>gi|311070662|ref|YP_003975585.1| deoxyguanosine kinase [Bacillus atrophaeus 1942]
 gi|310871179|gb|ADP34654.1| deoxyguanosine kinase [Bacillus atrophaeus 1942]
          Length = 207

 Score = 82.4 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 81/222 (36%), Gaps = 24/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  GAGKTT  ++L + L        V   P      +           +
Sbjct: 1   MNKAPFIAIEGPIGAGKTTLATMLSQELGFPIIKEIVEDNPYLDKFYDNI---------E 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS 119
           E+  + E + F   R   +E+  R  L EG+ ++ D  +  +  +       QHL     
Sbjct: 52  EWSFQLE-MFFLCHRYKQLEDTNRKFLKEGQPVIADYHIYKNVIFAERTLHDQHLDKYRQ 110

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
           +  +   ++  PD  I +   +   L+R++ R    E      Y E+         +Q  
Sbjct: 111 IYHLLTDDLPKPDLIIYIRASLTTLLERIEKRGRPFEKKIEQSYLEQLIADYEAAIKQ-- 168

Query: 178 LDIARNQPD-RCHIVDSAHSFQSVATN-----ILNIVWELVQ 213
             +    P+ +   +D   S   V        I   V EL++
Sbjct: 169 --LQEANPELKVLTIDGD-SEDFVLNERDFKGIAAQVKELIK 207


>gi|213029631|ref|ZP_03344078.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
          Typhi str. 404ty]
          Length = 89

 Score = 81.6 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
          +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5  YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62 FGAEAEAIVFAAARLDHVENVIRP 85
             +AE ++  AAR+  V NV  P
Sbjct: 65 ITDKAEVLIVLAARVQLVRNVTNP 88


>gi|256380301|ref|YP_003103961.1| thymidylate kinase [Actinosynnema mirum DSM 43827]
 gi|255924604|gb|ACU40115.1| thymidylate kinase [Actinosynnema mirum DSM 43827]
          Length = 210

 Score = 81.6 bits (201), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 36/222 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVL---LSCGVDEFG 63
            EG++GAGK T    L   L  +   V     P  G    A+  R  L   L   VDE  
Sbjct: 2   VEGLDGAGKRTLTGALTAELVSRGARVTTGAFPRYGRDVHADLVRAALYGELGPLVDEV- 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQ 121
               A+++A  R    E + R  L    ++L DR++ S  AY     R      F+  ++
Sbjct: 61  -RGMALLYALDRRGAREEL-RVGLASHDVVLLDRYIASGAAYGAARLRQGPDGEFVAWVR 118

Query: 122 EISVQEV-----------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            + V                       +P  +  +R  +R +       D +E  D  + 
Sbjct: 119 ALEVDRFELPLPDLQLLLR--------VPAAVAEQRAAHREATEADRGRDVYES-DGGLQ 169

Query: 171 EKRRQIFLDIARN---QPDRCHIVDSAHSFQSV-ATNILNIV 208
            +  +++  +A      P     VD +     +    I +++
Sbjct: 170 RRCGEVYDGLAATSWLSP--WRAVDGSVPAAELGVAAIADLL 209


>gi|312200489|ref|YP_004020550.1| thymidylate kinase [Frankia sp. EuI1c]
 gi|311231825|gb|ADP84680.1| thymidylate kinase [Frankia sp. EuI1c]
          Length = 228

 Score = 80.8 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 72/230 (31%), Gaps = 46/230 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69
           G++GAGK+T    L   L             GG P  +A  H L    G    G      
Sbjct: 4   GVDGAGKSTAARRLANELTASGTPARYFENAGGRPIIDALAHRLGRRDGRHLLGNRGYLG 63

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-----------LFLD 118
           V    R   +   +  + +  ++ + DR+    YA    R  S+              +D
Sbjct: 64  VEVTIRWLAITRAVTLSTLTRRVAVMDRYTYCQYAIMRARGDSRPTRRPTDDQDLWEAID 123

Query: 119 S----------------------LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           +                      ++ +      PD T  L +P +   +RVQ R      
Sbjct: 124 TSGGHGRGFNRSDPQTGGHAERLVRLLYAPFPKPDATFYLAVPPEKAARRVQARGR---- 179

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
                 + +D +        +  +    P    ++D++ + + +   I +
Sbjct: 180 ------DVEDPIYLAAFAAAYHTL-PEFPG-FTVIDASGNAEELLATIQS 221


>gi|187933942|ref|YP_001885545.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B]
 gi|187722095|gb|ACD23316.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B]
          Length = 208

 Score = 80.8 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 25/207 (12%)

Query: 8   SFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCG---VDE 61
            FEGI+  GKTT I  LK R  +   Y+  +   PG            +  +        
Sbjct: 15  VFEGIDNVGKTTIIKELKGRICKEMGYECEIVAFPGNEERTLGGFVYDIHHNEKRYIDYS 74

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +  ++  A+ +D ++  +       KI++ DRF  S+YAY G     +   + ++ 
Sbjct: 75  INDASLQLLHVASHIDLIQRKLMEKYSSSKIIMMDRFWWSTYAY-GLSGGLKSNVVSAI- 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + P+      + V+      +     R+    DY   KD++I     Q + D+A
Sbjct: 133 ------LAPELICWEKINVN------KIFLIERKDREKDYEADKDILIM----QNYRDLA 176

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
           R  P +C I+++  S +     I N +
Sbjct: 177 RKNP-KCQIINNDGSLEETTNMIFNEI 202


>gi|90411356|ref|ZP_01219368.1| putative hymidylate kinase [Photobacterium profundum 3TCK]
 gi|90327885|gb|EAS44216.1| putative hymidylate kinase [Photobacterium profundum 3TCK]
          Length = 203

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 18/154 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI +EG++  GKTT  SL  +  +   +   V         A   R V+     D
Sbjct: 1   MNK--FIVYEGLDACGKTTLSSLYAKERKSVVHSAVV-------EEALGLRKVI-----D 46

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLD 118
            + ++  A++F         + +  AL  G  ++ DR+  S+ AYQ    S   +   +D
Sbjct: 47  SYQSKESALLFFLMNNYLKSHEVAGALESGD-VILDRYFFSTLAYQTALLSESIVKNIVD 105

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           +L   +   ++P+  + +    +   KR++ R  
Sbjct: 106 TLN-TTQNILLPEVIVFVKADAETINKRIEARDG 138


>gi|282162836|ref|YP_003355221.1| putative thymidylate kinase [Methanocella paludicola SANAE]
 gi|282155150|dbj|BAI60238.1| putative thymidylate kinase [Methanocella paludicola SANAE]
          Length = 186

 Score = 80.1 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 30/210 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCGVDEF 62
            F   +G++G+GK T    LK +L +   +V +   P    A      R ++ S      
Sbjct: 2   RFYVIDGLDGSGKDTQAYKLKEYLSKSGREVALRIHPASDNAFGHIAKRSLVKSGAF--- 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                A  F    LD V ++I     +  ++   R+  +  AY           +  +  
Sbjct: 59  -WRLVATFFYG--LDVVRSIILYCRGDRDVIFV-RYTLA-CAY------LPRAIIRPVYA 107

Query: 123 ISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +    +   P     LD+  +  L+R++ R    E         + +   +K R   L I
Sbjct: 108 VVNFLLPKSPHM-FFLDVSPEEALRRIKKRGDSEEMF-------ETLPHLQKNRSRALLI 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                    +VD   +   V   I+  + +
Sbjct: 160 L----GNWKVVDGNVAPDKVFEQIVGSLSD 185


>gi|73994339|ref|XP_851996.1| PREDICTED: similar to deoxythymidylate kinase (thymidylate kinase)
           [Canis familiaris]
          Length = 156

 Score = 80.1 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 13/126 (10%)

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           +I+  L +G  L+ DR+  S  A+   +   +   LD  ++  V    PD  + L L + 
Sbjct: 26  LIKKKLSQGITLIVDRYAFSGVAFTSAK---EDFSLDWCKQPDVGLPKPDLVVFLQLRLA 82

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201
               R             + +E  D    E+  + F  +  +Q     +VD++ S ++V 
Sbjct: 83  EAATR--------GEFGRERYE--DGKFQERALRRFHQLMADQTVNWKMVDASKSIEAVH 132

Query: 202 TNILNI 207
             I  +
Sbjct: 133 KEIHAL 138


>gi|226310244|ref|YP_002770138.1| hypothetical protein BBR47_06570 [Brevibacillus brevis NBRC 100599]
 gi|226093192|dbj|BAH41634.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 191

 Score = 79.7 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 29/218 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     ++FEGI+   K    +LL+  L+   Y V     P       A   + L C ++
Sbjct: 1   MRQPTIVAFEGIDANAKEAQAALLEENLRCLGYKVKRVSFPRLDTPIGAVIGMWLRCEIE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +A   +F A  LD+   + R +      ++ D +  S+Y Y   +D+    +  ++
Sbjct: 61  -LDEKAVGKLFEADFLDYQREMARLSKENVDFIIMDHYELSNYYYFYIKDT-PLSWYATM 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +++     PD T  L   VD                        +  +  K ++ +L +
Sbjct: 119 SDLTK---RPDATFFLRTEVD-----------------------ANHAMLLKVQEAYLSL 152

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL-VQKRVS 217
           A       H +D+A   + +  NIL +V +L ++KRV+
Sbjct: 153 AHASRRSVHTLDTAIGVERMQKNILQVVHQLHLKKRVT 190


>gi|325958278|ref|YP_004289744.1| Thymidylate kinase [Methanobacterium sp. AL-21]
 gi|325329710|gb|ADZ08772.1| Thymidylate kinase [Methanobacterium sp. AL-21]
          Length = 197

 Score = 79.7 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 29/214 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63
            FI  +G++G+GK T   L+          V V   P    P    A+  LL  G  +  
Sbjct: 2   RFIVVDGLDGSGKDTQAKLIADKYLANGESVIVRSHPSEDNPYGIMAKKALL--GHGKLD 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++ +A      V   +R        ++  R+L    AY              L + 
Sbjct: 60  HIMASVYYALD----VIRSVRVYKESADNVIMVRYLM-GVAY------LPMPIASLLYKF 108

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +  V+P  +    LD+   + ++R+ +R         D           K R+  L + 
Sbjct: 109 FI-TVLPSSEYMFFLDVEPAVLMERLSSRSEKEMFENPDDL--------VKVRKKALKLT 159

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                  HI+++  S +     I  I+ +L +K+
Sbjct: 160 EG----WHIIENGQSLEDSQKKIAEILDDLDKKK 189


>gi|52078510|ref|YP_077301.1| deoxyguanosine kinase [Bacillus licheniformis ATCC 14580]
 gi|52783873|ref|YP_089702.1| deoxyguanosine kinase [Bacillus licheniformis ATCC 14580]
 gi|319648538|ref|ZP_08002753.1| dgk protein [Bacillus sp. BT1B_CT2]
 gi|52001721|gb|AAU21663.1| deoxyguanosine kinase [Bacillus licheniformis ATCC 14580]
 gi|52346375|gb|AAU39009.1| Dgk [Bacillus licheniformis ATCC 14580]
 gi|317389386|gb|EFV70198.1| dgk protein [Bacillus sp. BT1B_CT2]
          Length = 207

 Score = 79.7 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 79/227 (34%), Gaps = 34/227 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+  FI+ EG  GAGKTT  S+L   L        V   P      +           D
Sbjct: 1   MNTAPFIAVEGPIGAGKTTLASMLSEKLSLSLVKEIVEENPFLDKFYD---------EKD 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E+  + E + F   R   +E+  +  L     ++ D  +  +  +     + +   L+  
Sbjct: 52  EWSFQLE-MFFLCNRYKQLEDTEKKYLHHHMPVVSDYHIYKNLIF--AERTLEGKKLEKY 108

Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQ 175
           ++I          P+  I +   +   L+R++ R           FE++ D    E+   
Sbjct: 109 RKIYQLLTEDLPKPNVIIYIRASLPTLLERIKKRGRP--------FEQEMDKQYLEQLIN 160

Query: 176 IFLDIARNQPDR-----CHIVDSAHS----FQSVATNILNIVWELVQ 213
            +    +   +         ++         ++V   I + V E ++
Sbjct: 161 DYEAAIKQFKESDPPIPVIEINGDQEDFVISEAVFNRIADQVKEYIE 207


>gi|229917438|ref|YP_002886084.1| deoxynucleoside kinase [Exiguobacterium sp. AT1b]
 gi|229468867|gb|ACQ70639.1| deoxynucleoside kinase [Exiguobacterium sp. AT1b]
          Length = 211

 Score = 78.9 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 17/165 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG  G GKT+   ++ +    +  +  V   P      E           +E+  
Sbjct: 1   MFITVEGPIGVGKTSLAHIISQHFSMQMLNEIVEENPFLGKFYEDI---------EEWSF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQ 121
           + E + F   R   ++++ +  L + + ++ D  +  +  +     S +   L   + + 
Sbjct: 52  QTE-MFFLCNRFKQLDDIHKHHLSQQQSVVSDYHIFKNLIF--AHRSLKPAHLNKYEQIY 108

Query: 122 EISVQE-VMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFER 164
           +I   +   PD  I L   ++  +KRV  R   + E+   DY E+
Sbjct: 109 KILTHDMPKPDVVIYLHASIETLMKRVALRGREVEENMSRDYLEQ 153


>gi|308067671|ref|YP_003869276.1| hypothetical protein PPE_00888 [Paenibacillus polymyxa E681]
 gi|305856950|gb|ADM68738.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 206

 Score = 78.9 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 74/221 (33%), Gaps = 24/221 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EG  GAGKTT  S+L   L        V   P      +           D
Sbjct: 1   MKQAPFIAVEGPIGAGKTTLASMLSTELHLPIIKEIVEENPFLDKFYQNI---------D 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119
           E+  + E + F   R   +E+     + + + ++ D  +  +  +        +      
Sbjct: 52  EWSFQLE-MFFLCNRYKQLEDTGLQYIEKAQPVISDYHIYKNLIFAERTLKGVKLEKYRQ 110

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
           +  +   +   PD  I +   ++  L R++ R    E      Y E+  +       +  
Sbjct: 111 IYHLLTDDMPKPDIIIYIRADLNTLLGRIRKRARSFEQEMDPAYLEQLIIDY----DKGM 166

Query: 178 LDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212
             +A   P  R   V+       V        I++ V EL+
Sbjct: 167 QFLAEQSPSPRILTVNGN-EIDFVENQAQFKQIVSDVKELI 206


>gi|119960496|ref|YP_949169.1| thymidylate kinase [Arthrobacter aurescens TC1]
 gi|119947355|gb|ABM06266.1| putative Thymidylate kinase [Arthrobacter aurescens TC1]
          Length = 193

 Score = 78.5 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 25/207 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63
           + I   GI+G+GKTT    L      +     +         A   R  LLS     +  
Sbjct: 1   MLIVLTGIDGSGKTTAARALVDSALAEGRSALLLSN-----HAARRRMSLLSARYGWKVP 55

Query: 64  AEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 +    R+ +V  ++  A       +++ DR L    A +      +   L  L 
Sbjct: 56  PRVADFIETGVRVFNV--LVNHARARQFDGLVVMDRHLHCQLALRQANGLRRGRLLPWLL 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E   +    D  +  D    I  +RV  R +          +++ V      R  +  + 
Sbjct: 114 E---KLPAADLHVHFDADPTIAHERVMARGT----------DQETVADLRAFRDAYRSLP 160

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +     +VD++     V   +  ++
Sbjct: 161 EYED--FAVVDASGEPGDVQAQLNRVI 185


>gi|304315230|ref|YP_003850377.1| thymidylate kinase-related protein [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588689|gb|ADL59064.1| thymidylate kinase-related protein [Methanothermobacter
           marburgensis str. Marburg]
          Length = 200

 Score = 78.5 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 35/212 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63
            FI  +G++GAGK TH  L++R    +   V     P    P  + AR  LL  G     
Sbjct: 2   RFIVIDGLDGAGKDTHAELIRRRYLERGERVIFRSHPEEDNPYGKRARKALLIGGRIN-- 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               A VF A  LD + ++             L+  R+L    AY           L S+
Sbjct: 60  -HIRAAVFYA--LDVIRSLWLYHWRSNPGPDTLIFSRYLM-GVAY-------LPGPLASI 108

Query: 121 QEISVQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
               +  V+P  T      LD+  +  L+R+  R              +++    + RQ 
Sbjct: 109 MYRLLSGVLP--TTKYMFFLDVSPEESLRRLMERDEHEMF--------ENLEDLTRTRQK 158

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            L +A +     +I+++  S   V   I  I+
Sbjct: 159 ALRLASD----WYIINTEDSIADVQRRIDEIL 186


>gi|311898057|dbj|BAJ30465.1| hypothetical protein KSE_46840 [Kitasatospora setae KM-6054]
          Length = 215

 Score = 78.5 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 23/212 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            SG  +  EGI G+GK+T   LL + L  +   V         P A    +V      D 
Sbjct: 16  RSGALVVLEGISGSGKSTLSGLLAQRLGAEVLHVI------PNPLAGLIGYV-----NDH 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   +     A  LD  ++  R AL+ G ++  DR+  S        +        +  
Sbjct: 65  GGTLTQFAFHLAGLLDGADSA-RRALVSGSLV-ADRWTGSVVVNHAAVNQLDLEVAAA-- 120

Query: 122 EISVQ-EVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
           + +     +P  D T+ L    +   K +++R   R +    D F  +   +  + ++++
Sbjct: 121 QFAPYLGYLPRADLTVYL----ETSEKEIRHRMETRPARPATDRFLVRRPQLLPRVQELY 176

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
              A   P    I     S   +   I  ++ 
Sbjct: 177 RRFAATDPTGIAISTDGRSPDELTEEIHALLE 208


>gi|270004399|gb|EFA00847.1| hypothetical protein TcasGA2_TC003748 [Tribolium castaneum]
          Length = 211

 Score = 78.5 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 22/161 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG++G GK+     L   L  +       +      + +  R  L         A 
Sbjct: 56  LIILEGLDGCGKSRISRELSSKLSAE-------KWCTPPESIKHIRD-LFDDHPTLRTAY 107

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFL----D 118
                + AA    +E     A+++ K ++ DR+  S+ AY   Q   DSS    +    D
Sbjct: 108 YALGNYIAA----LECT---AILKQKPVVMDRYWHSTAAYAIAQAVYDSSGATEMPPEGD 160

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           S  +     + P   I LD+  D+ L+R+  R +      L
Sbjct: 161 SFYKWPQDLLQPSIVIFLDVDEDVRLERLSRRKTTTTQEDL 201


>gi|33563150|dbj|BAC81722.1| pseudo thymidylate kinase [Onion yellows phytoplasma]
          Length = 125

 Score = 78.1 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 9/119 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG++G+GKT+ I+ L+  L+       + +  G +   +  R + L+    +   
Sbjct: 2   KLIVFEGLDGSGKTSLINSLQPQLKT---PHQLYQGLGSSSIGKEIRDLFLN--FQQVDY 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                +  A        + +      ++++ DR+L S+YAYQ    S +   L  L++I
Sbjct: 57  LTRFYLSLANMAQIQAELFK----NNQLIILDRWLPSAYAYQLFPFSKEKKQLPPLKKI 111


>gi|326774410|ref|ZP_08233675.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1]
 gi|326654743|gb|EGE39589.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1]
          Length = 232

 Score = 78.1 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 52/160 (32%), Gaps = 27/160 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-------REPGGTPAAEAARHVLLS 56
           G  I+F G +GAGK+T  + L + L    +   +         +PG +   +    ++  
Sbjct: 15  GRLITFVGGDGAGKSTLATRLHQALNDAGHRAVLVGKTSTTAADPGLSDYLDRLNTLVYR 74

Query: 57  CGV---DEFGAEAEAIVFAA-----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
                    G     +  AA      RL     VI+PAL  G  ++ D       A    
Sbjct: 75  RDTRVAQACGDHYWLLALAAWYTLQDRL-----VIQPALAAGTHVVLDNSPHKILARYAV 129

Query: 109 RDSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKR 146
                    + +        +P  D    LDL     L R
Sbjct: 130 NPDIDPRLPERV-----FAHLPAGDLVFFLDLSAREALAR 164


>gi|33563154|dbj|BAC81724.1| pseudo thymidylate kinase [Onion yellows phytoplasma]
          Length = 145

 Score = 78.1 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 79  VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE-----VMPDCT 133
           +  +        ++++ DR+L S+YAYQ    S +   L  L++I           PD  
Sbjct: 1   MAQIQAELFKNNQLIILDRWLPSAYAYQLFPFSKEKKQLSPLKKIFKLNHETILKKPDLL 60

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH--IV 191
           I LD+   IG  R + + + +     D  ER+ +   +  RQ +     +        I+
Sbjct: 61  IYLDIDPLIGRTRKKKQKNHQR----DLIERQSLTYFQNVRQGYDHYLTHYTSDIKKLIL 116

Query: 192 DSAHSFQSVATNILNIV 208
           + + S +S    I+  +
Sbjct: 117 NGSDSIKSNVKQIIKQI 133


>gi|332188674|ref|ZP_08390389.1| thymidylate kinase family protein [Sphingomonas sp. S17]
 gi|332011291|gb|EGI53381.1| thymidylate kinase family protein [Sphingomonas sp. S17]
          Length = 223

 Score = 78.1 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 86/225 (38%), Gaps = 20/225 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62
             ++ EG +GAGK T  + +   L            P    T    A    L        
Sbjct: 3   FLLAIEGADGAGKATATAAVTERLNAAGLSAAALSFPRYAETVGGWALGEYLAGRLPHAA 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-----RDSSQHLFL 117
             E  A ++A  R +   +++  A     +++ DR++ S+ AYQ       +  +   ++
Sbjct: 63  APETAATLYALDRFESRPHLVELA-ERHDVIVFDRYIASNMAYQAAQVPTEQAEALLQWI 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + L+ +  +   P  ++ LD P++I    + R + R    E+   D +E  D+ +  + R
Sbjct: 122 EQLETVQFRLPAPHLSVYLDTPLEIARDLIARKRKRSYTDETY--DAYEA-DLGLQARVR 178

Query: 175 QIFLDIAR----NQPDRCHIVDSA--HSFQSVATNILNIVWELVQ 213
             +  +A      +      V         ++A  I  +V E ++
Sbjct: 179 ANYAAMADGAMLGEWATVSTVAGGNLRDPAAIADEITALVTERLR 223


>gi|5650772|gb|AAD45944.1|AF089813_7 putative thymidylate kinase [Synechococcus sp. PCC 7002]
          Length = 101

 Score = 78.1 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI FEGI+G+G +T   LL +  QR+     ++ EP         R  L          
Sbjct: 8  KFIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDP 67

Query: 65 ----EAEAIVFAAARLDHVENVI 83
                 A +FA  R DH+ N I
Sbjct: 68 VQLNRQLAYLFAGDRHDHLYNEI 90


>gi|39938876|ref|NP_950642.1| hypothetical protein PAM_390 [Onion yellows phytoplasma OY-M]
 gi|39939133|ref|NP_950899.1| hypothetical protein PAM_647 [Onion yellows phytoplasma OY-M]
 gi|39721985|dbj|BAD04475.1| hypothetical protein [Onion yellows phytoplasma OY-M]
 gi|39722242|dbj|BAD04732.1| hypothetical protein [Onion yellows phytoplasma OY-M]
          Length = 126

 Score = 77.8 bits (191), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 11/120 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63
             I FEG++G+GKT+ I+ L+  L+      H   +P G +   +  R + L+    +  
Sbjct: 3   KLIVFEGLDGSGKTSLINSLQPQLK----TPHQLYQPFGSSSIGKEIRDLFLN--FQQVD 56

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 +  A        + +      ++++ DR+L S+YAYQ    S +   L  L++I
Sbjct: 57  YLTRFYLSLANMAQIQAELFK----NNQLIILDRWLPSAYAYQLFPFSKEKKQLPPLKKI 112


>gi|213422228|ref|ZP_03355294.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
          Typhi str. E01-6750]
          Length = 79

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61
          +I  EG+EGAGKTT   ++   L++    ++  TREPGGT  AE  R ++L     G + 
Sbjct: 5  YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64

Query: 62 FGAEAEAIVFAAARL 76
             +AE ++F AAR+
Sbjct: 65 ITDKAEVLMFYAARV 79


>gi|288560482|ref|YP_003423968.1| thymidylate kinase Tmk2 [Methanobrevibacter ruminantium M1]
 gi|288543192|gb|ADC47076.1| thymidylate kinase Tmk2 [Methanobrevibacter ruminantium M1]
          Length = 192

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 25/216 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ +G++G+GK T    +K   +++   V  +           ++  L   G  
Sbjct: 1   MKR--FIAIDGLDGSGKDTQARKIKEKYEQEGTVVIRSHPTSDNFFGRHSKSALEKKG-- 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +       + + A     + +VI+    +   ++  R+  +  +Y  +  S     L  +
Sbjct: 57  KLNKIIATLCYGAD---AIRSVIK-YYGKYDTVIFVRYTLA-VSYLSKAISVPVYKLVCV 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                +         LD+     ++RV++R    E      FE  D     K R     +
Sbjct: 112 LLPISEYF-----FYLDVSPKELVRRVKSRNEKEEM-----FENYDA--FVKVR----KM 155

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           A       +++ +  S   + + I  I+ EL +K +
Sbjct: 156 AEPVLYNWNVIPADDSPDEIFSRIEAILDELDKKLL 191


>gi|126303911|ref|XP_001381291.1| PREDICTED: similar to thymidylate kinase family LPS-inducible
           member [Monodelphis domestica]
          Length = 496

 Score = 77.4 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 26/226 (11%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    + + +      V +   P   P     R +  +   
Sbjct: 264 QKGKFPVIAIEGLDATGKTTVTHSIAKTMNA----VFLKSPP---PCISQWRKIFDNEPA 316

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117
               A      +  A       + + +      ++ DR+  S+ AY    + S       
Sbjct: 317 IIRRAYYSLGNYIIA-----SEIAKASTQAP--VIVDRYWHSTAAYAIATEISGLPHYLP 369

Query: 118 ---DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                + +     + PD  ++L         R+Q R   +     +     + +  EK  
Sbjct: 370 PAHHPIYQWPKDLLKPDIILLLTTTPKERELRIQERGLEKTKEEEEL--EVNKLFREKVE 427

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
             +  +    P  CH+VD+      V  N+L+++     + ++ L 
Sbjct: 428 MSYKRM--ENPG-CHLVDAGPERGEVIQNVLDVIKNSFAQDINLLP 470


>gi|94971641|ref|YP_593689.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345]
 gi|94553691|gb|ABF43615.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345]
          Length = 235

 Score = 77.4 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 41/198 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD----- 60
            +SF G++G+GK+T I  L+  L        +             R   +    +     
Sbjct: 11  LVSFSGLDGSGKSTQIDNLRATLHANGLTTTLLAFWDNVVVGTRWREGFVHKMYNSEKGI 70

Query: 61  ----------------EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSY 103
                            + + A   ++      H+  V+  A   G  +++ DR++    
Sbjct: 71  GAPDKPVNRQDKNVRKWYLSLARHGLYLMD-AIHLRMVVARARRSGADVVIMDRYIYDEL 129

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           A    ++     F+  ++ I      PD   +LD  V+    R                 
Sbjct: 130 ANLPLQNKLTRSFIRFVRAIV---PTPDVAYLLDADVEAARARKPE-------------- 172

Query: 164 RKDVMIHEKRRQIFLDIA 181
              V    K R+ +  +A
Sbjct: 173 -YPVEFMHKCRRWYYQLA 189


>gi|212637864|ref|YP_002314384.1| Deoxyguanosine kinase [Anoxybacillus flavithermus WK1]
 gi|212559344|gb|ACJ32399.1| Deoxyguanosine kinase [Anoxybacillus flavithermus WK1]
          Length = 212

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 30/216 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+   FI+ EG  G GKT+   ++    Q +     V   P      E           +
Sbjct: 1   MSRVPFITVEGPIGVGKTSLAKVISTHFQYELLKEIVDENPFLGKFYENI---------E 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118
           E+  + E + F   R   +E+V +  L  GK ++ D  +  +  +A Q  +      ++ 
Sbjct: 52  EWSFQTE-MFFLCNRYKQLEDVEKNFLNNGKPVVADYHIFKNLIFAKQTLKGKQYEKYVR 110

Query: 119 SLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ- 175
            + +I   +   P+  I L   +   L+R+  R    E     +Y ++      +   Q 
Sbjct: 111 -IYDILTNDMPKPNVVIYLHASLHTLLERIAMRGREFEKNIDPNYLQQLSHAYEQAMEQF 169

Query: 176 ----------IF----LDIARNQPDRCHIVDSAHSF 197
                      F    LD      DR +I++   S 
Sbjct: 170 EQAHPHIPVLRFNGDELDFVHRDKDRFYILNELQSV 205


>gi|82750265|ref|YP_416006.1| deoxypurine kinase subunit [Staphylococcus aureus RF122]
 gi|82655796|emb|CAI80196.1| deoxypurine kinase subunit [Staphylococcus aureus RF122]
          Length = 205

 Score = 77.0 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI  EG  G GK++    L + L        +T  P  +   E            
Sbjct: 1   MNKP-FIVIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 105

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199


>gi|310640406|ref|YP_003945164.1| sec-independent protein translocase, tatc subunit [Paenibacillus
           polymyxa SC2]
 gi|309245356|gb|ADO54923.1| Sec-independent protein translocase, TatC subunit [Paenibacillus
           polymyxa SC2]
          Length = 217

 Score = 76.6 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 74/227 (32%), Gaps = 36/227 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EG  GAGKTT  S+L   L        V   P      +           D
Sbjct: 12  MKQAPFIAVEGPIGAGKTTLASMLSTELHLPMIKEIVEENPFLDKFYQNI---------D 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119
           E+  + E + F   R   +E+     + + + ++ D  +  +  +        +      
Sbjct: 63  EWSFQLE-MFFLCNRYKQLEDTGLQYIEKAQPVISDYHIYKNLIFAERTLKGVKLEKYRQ 121

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER------KDVMIHE 171
           +  +   +   PD  + +   +D  L R++ R    E      Y E+      K +    
Sbjct: 122 IYHLLTDDMPKPDIIVYIRADLDTLLGRIRKRGRSFEQEMDPAYLEQLITDYDKGIQF-- 179

Query: 172 KRRQIFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212
                   +A   P  R   V+       V        I++ V EL+
Sbjct: 180 --------LAEQSPAPRILTVNGN-EIDFVENQAQFEQIVSDVKELI 217


>gi|220914159|ref|YP_002489468.1| thymidylate kinase [Arthrobacter chlorophenolicus A6]
 gi|219861037|gb|ACL41379.1| thymidylate kinase [Arthrobacter chlorophenolicus A6]
          Length = 203

 Score = 76.6 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 29/212 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   GI+G+GK+T    L + ++ +     +        A      VL +    +  A
Sbjct: 1   MIIVLTGIDGSGKSTAARALVQAVRARGGKAMLLSN----HAGRRTMSVLAARWGVQLPA 56

Query: 65  EAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            A     AA  +  V NV+   L       +++ DR L    A +  +   +  FL  L 
Sbjct: 57  RAAD---AAETVLRVANVLVSHLRARRFDGMVVIDRHLHCQLALRSMKGLPRGRFLPWLL 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   P   + LDL      +R+  R +          + + +      R  +  + 
Sbjct: 114 A---ALPQPAAVVHLDLEPAEAHRRITARGT----------DSETLADLSAFRDAYAGL- 159

Query: 182 RNQPD--RCHIVDSAHSFQSVATNILNIVWEL 211
              P+      VD++     +   +L  V  L
Sbjct: 160 ---PEFGGFIRVDASLPAAELVQRMLQAVDTL 188


>gi|308171907|ref|YP_003918612.1| deoxyguanosine kinase [Bacillus amyloliquefaciens DSM 7]
 gi|307604771|emb|CBI41142.1| deoxyguanosine kinase [Bacillus amyloliquefaciens DSM 7]
 gi|328551715|gb|AEB22207.1| deoxyguanosine kinase [Bacillus amyloliquefaciens TA208]
 gi|328909975|gb|AEB61571.1| deoxyguanosine kinase [Bacillus amyloliquefaciens LL3]
          Length = 207

 Score = 76.6 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 24/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  GAGKTT  S+L   L     +  V   P      +           +
Sbjct: 1   MNRAPFIAVEGPIGAGKTTLASMLSEELGFPMINEIVEDNPYLDKFYDNI---------E 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119
           E+  + E + F   R   +E+  R  L +G+ +L D  +  +  +        +      
Sbjct: 52  EWSFQLE-MFFLCHRYKQLEDTDRDYLKQGQPVLSDYHIYKNVIFAERTLHGQKLEKYKQ 110

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
           +  +   ++  P+  + +   +   L+R++ R    E      Y ER         RQ  
Sbjct: 111 IYHLLTHDLPKPNVIVYIKASLPTLLQRIEKRGRPFEKNIEHQYLERLIADYDTAIRQ-- 168

Query: 178 LDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELVQ 213
             +    PD     +D   +   V        I   V EL++
Sbjct: 169 --LQEEDPDISVLTIDGD-TEDFVLNKTDYERIARQVKELIK 207


>gi|282910198|ref|ZP_06318002.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282325590|gb|EFB55898.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           WBG10049]
          Length = 220

 Score = 76.6 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 16  MNK-AFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 66  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 120

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 121 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 176

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 177 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 214


>gi|151220731|ref|YP_001331553.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161508797|ref|YP_001574456.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253731163|ref|ZP_04865328.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253732566|ref|ZP_04866731.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257424671|ref|ZP_05601098.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427339|ref|ZP_05603738.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429976|ref|ZP_05606360.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257432677|ref|ZP_05609037.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257435581|ref|ZP_05611629.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M876]
 gi|258422596|ref|ZP_05685502.1| deoxynucleoside kinase [Staphylococcus aureus A9635]
 gi|258452709|ref|ZP_05700707.1| deoxynucleoside kinase [Staphylococcus aureus A5948]
 gi|282903145|ref|ZP_06311036.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|282904935|ref|ZP_06312793.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907885|ref|ZP_06315720.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282913390|ref|ZP_06321179.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|282915880|ref|ZP_06323645.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus D139]
 gi|282918345|ref|ZP_06326082.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C427]
 gi|282923307|ref|ZP_06330987.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C101]
 gi|282924472|ref|ZP_06332144.1| deoxynucleoside kinase [Staphylococcus aureus A9765]
 gi|283769714|ref|ZP_06342606.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus H19]
 gi|283957355|ref|ZP_06374808.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|293500436|ref|ZP_06666287.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509381|ref|ZP_06668092.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M809]
 gi|293523968|ref|ZP_06670655.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294850334|ref|ZP_06791068.1| deoxynucleoside kinase [Staphylococcus aureus A9754]
 gi|150373531|dbj|BAF66791.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160367606|gb|ABX28577.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253725128|gb|EES93857.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253729495|gb|EES98224.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257272241|gb|EEV04364.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275532|gb|EEV07005.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279173|gb|EEV09774.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257282092|gb|EEV12227.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284772|gb|EEV14891.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M876]
 gi|257847168|gb|EEV71176.1| deoxynucleoside kinase [Staphylococcus aureus A9635]
 gi|257859582|gb|EEV82432.1| deoxynucleoside kinase [Staphylococcus aureus A5948]
 gi|282314175|gb|EFB44565.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C101]
 gi|282317479|gb|EFB47851.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C427]
 gi|282320176|gb|EFB50521.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus D139]
 gi|282322422|gb|EFB52744.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus M899]
 gi|282328269|gb|EFB58547.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331760|gb|EFB61271.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282592883|gb|EFB97887.1| deoxynucleoside kinase [Staphylococcus aureus A9765]
 gi|282596100|gb|EFC01061.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus C160]
 gi|283459861|gb|EFC06951.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus H19]
 gi|283790806|gb|EFC29621.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|290920931|gb|EFD97992.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291095441|gb|EFE25702.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467478|gb|EFF09993.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M809]
 gi|294822846|gb|EFG39281.1| deoxynucleoside kinase [Staphylococcus aureus A9754]
 gi|320141793|gb|EFW33621.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323439829|gb|EGA97546.1| deoxypurine kinase subunit [Staphylococcus aureus O11]
 gi|323443070|gb|EGB00690.1| deoxypurine kinase subunit [Staphylococcus aureus O46]
          Length = 220

 Score = 76.6 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 16  MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 66  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 120

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 121 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 176

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 177 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 214


>gi|154684534|ref|YP_001419695.1| deoxyguanosine kinase [Bacillus amyloliquefaciens FZB42]
 gi|154350385|gb|ABS72464.1| Dgk [Bacillus amyloliquefaciens FZB42]
          Length = 207

 Score = 76.2 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 78/222 (35%), Gaps = 24/222 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  GAGKTT  ++L   L     +  V   P      +           +
Sbjct: 1   MNRAPFIAVEGPIGAGKTTLATMLSEELGFPMINEIVEDNPYLDKFYDNI---------E 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119
           E+  + E + F   R   +E+  R  L +G+ +L D  +  +  +        +      
Sbjct: 52  EWSFQLE-MFFLCHRYKQLEDTDRDYLKQGQPVLSDYHIYKNVIFAERTLHGQKLEKYKQ 110

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
           +  +   ++  P+  + +   +   L+R++ R    E      Y ER         RQ  
Sbjct: 111 IYHLLTHDLPKPNIIVYIKASLPTLLQRIEKRGRPFEKNIEHQYLERLITDYDTAIRQ-- 168

Query: 178 LDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELVQ 213
             +    PD     +D   +   V        I   V EL++
Sbjct: 169 --LQEEDPDISVLTIDGD-TEDFVLNKTDYERIARQVKELIK 207


>gi|297208729|ref|ZP_06925157.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297590552|ref|ZP_06949191.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MN8]
 gi|300912819|ref|ZP_07130261.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304381844|ref|ZP_07364491.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|296886674|gb|EFH25579.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297576851|gb|EFH95566.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MN8]
 gi|300885923|gb|EFK81126.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302750449|gb|ADL64626.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304339630|gb|EFM05577.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320141578|gb|EFW33417.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 215

 Score = 76.2 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 11  MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 61  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 115

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 116 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 171

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 172 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 209


>gi|148267017|ref|YP_001245960.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393064|ref|YP_001315739.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH1]
 gi|257795344|ref|ZP_05644323.1| deoxynucleoside kinase [Staphylococcus aureus A9781]
 gi|258408969|ref|ZP_05681250.1| deoxynucleoside kinase [Staphylococcus aureus A9763]
 gi|258420393|ref|ZP_05683336.1| deoxynucleoside kinase [Staphylococcus aureus A9719]
 gi|258439313|ref|ZP_05690245.1| deoxynucleoside kinase [Staphylococcus aureus A9299]
 gi|258444053|ref|ZP_05692390.1| deoxynucleoside kinase [Staphylococcus aureus A8115]
 gi|258446322|ref|ZP_05694480.1| deoxynucleoside kinase [Staphylococcus aureus A6300]
 gi|258448415|ref|ZP_05696530.1| deoxynucleoside kinase [Staphylococcus aureus A6224]
 gi|258453771|ref|ZP_05701745.1| deoxynucleoside kinase [Staphylococcus aureus A5937]
 gi|282894993|ref|ZP_06303216.1| deoxynucleoside kinase [Staphylococcus aureus A8117]
 gi|282928895|ref|ZP_06336486.1| deoxynucleoside kinase [Staphylococcus aureus A10102]
 gi|295406934|ref|ZP_06816737.1| deoxynucleoside kinase [Staphylococcus aureus A8819]
 gi|297246242|ref|ZP_06930091.1| deoxynucleoside kinase [Staphylococcus aureus A8796]
 gi|147740086|gb|ABQ48384.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945516|gb|ABR51452.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH1]
 gi|257789316|gb|EEV27656.1| deoxynucleoside kinase [Staphylococcus aureus A9781]
 gi|257840320|gb|EEV64783.1| deoxynucleoside kinase [Staphylococcus aureus A9763]
 gi|257843583|gb|EEV67989.1| deoxynucleoside kinase [Staphylococcus aureus A9719]
 gi|257847650|gb|EEV71649.1| deoxynucleoside kinase [Staphylococcus aureus A9299]
 gi|257850723|gb|EEV74668.1| deoxynucleoside kinase [Staphylococcus aureus A8115]
 gi|257854916|gb|EEV77861.1| deoxynucleoside kinase [Staphylococcus aureus A6300]
 gi|257858284|gb|EEV81171.1| deoxynucleoside kinase [Staphylococcus aureus A6224]
 gi|257864027|gb|EEV86781.1| deoxynucleoside kinase [Staphylococcus aureus A5937]
 gi|282589503|gb|EFB94592.1| deoxynucleoside kinase [Staphylococcus aureus A10102]
 gi|282762675|gb|EFC02812.1| deoxynucleoside kinase [Staphylococcus aureus A8117]
 gi|294968165|gb|EFG44191.1| deoxynucleoside kinase [Staphylococcus aureus A8819]
 gi|297176840|gb|EFH36098.1| deoxynucleoside kinase [Staphylococcus aureus A8796]
          Length = 220

 Score = 76.2 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 16  MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +     S  +      
Sbjct: 66  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSPVEFQKFSK 120

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 121 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 176

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 177 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 214


>gi|312439023|gb|ADQ78094.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 215

 Score = 76.2 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 11  MNK-AFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 61  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 115

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 116 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 171

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 172 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 209


>gi|288553873|ref|YP_003425808.1| deoxyguanosine kinase [Bacillus pseudofirmus OF4]
 gi|288545033|gb|ADC48916.1| Deoxyguanosine kinase [Bacillus pseudofirmus OF4]
          Length = 217

 Score = 75.8 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 30/230 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +    Q       V   P  +   E           +E+  +
Sbjct: 6   FIAVEGPIGVGKTSLAKAISLHYQYHLLKEIVHENPFLSKFYENI---------EEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEIS 124
            E + F   R   +E++ R  L     ++ D  +  +  + Q    S Q+    ++ +I 
Sbjct: 57  TE-MFFLCNRYKQLEDIQRKFLASNVPVVADYHIYKNIIFAQRTLRSDQYEKYTAIYDIM 115

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----D 179
            Q+   P+  I LD  +   LKR++ R    E        + D     + R+ +      
Sbjct: 116 TQDMPKPNFIIYLDASLPTLLKRIEMRGREMEL-------KMDPAYLRQLREDYETAMAK 168

Query: 180 IARNQPDR-CHIVDSAHSFQSVA-----TNILNIVWELVQKRVSPLSSKK 223
            A   PD     ++       V        I  ++ +  ++    L S +
Sbjct: 169 WAVEYPDIPIIRINGD-ELDFVQHEQDLQKIFTLIDDARKEGAFCLESTR 217


>gi|6045051|dbj|BAA85260.1| thymidylate kinase [Moritella marina]
          Length = 80

 Score = 75.8 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAA-EAARHVLLSCGVDE- 61
           F+  EG+EGAGK+T +S +  +L  +   DV  TREP       E  R ++     +E 
Sbjct: 4  KFLVIEGLEGAGKSTAVSTVINWLAEQGITDVITTREPWWHKIKPEKMRAIVKDVDTEEP 63

Query: 62 FGAEAEAIVFAAARLD 77
              AE ++  AAR  
Sbjct: 64 LTESAELMLMYAARAQ 79


>gi|85858233|ref|YP_460435.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
 gi|85721324|gb|ABC76267.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
          Length = 487

 Score = 75.8 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 86/247 (34%), Gaps = 59/247 (23%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GL I+  G +GAGKTT I  + ++L        V +   G PA   +R  +L  G  +
Sbjct: 264 HGGLLIAIVGGDGAGKTTVIEEVHKWL---GRKFDVMKLHMGKPA--RSRTTILGSGFLK 318

Query: 62  FG--------------AEAEA--------IVFAAARLDHVENVIRPALMEGKILLCDRFL 99
            G               EAE         +VF A          R     G +++CDR+ 
Sbjct: 319 IGTMLGLYPATADLYAEEAEFPGYPFLIRMVFLAYDRYLTYLKARRFASNGGLVICDRYF 378

Query: 100 DSSY--------AYQGERDSSQHLFLDSLQEISV----QEVMPDCTIILDLPVDIGLKRV 147
            +              +  +  + F++ L  I      + + PD  I+L L  +I ++R 
Sbjct: 379 LADLLTMDGPRCKMMAKAFNRSNFFMNWLIRIEASCYEKMMSPDLLIVLRLNPEIAVQRK 438

Query: 148 QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ--PDRCHIVDSAHSFQSVATNIL 205
            +  ++                    R     I           +VDS+   + V   + 
Sbjct: 439 TDETAVS------------------VRARSTSIWEYDWSKTSACVVDSSRPKEEVLAQVQ 480

Query: 206 NIVWELV 212
           +++W  +
Sbjct: 481 SLIWRYL 487


>gi|302332270|gb|ADL22463.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 205

 Score = 75.8 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 105

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYRKYY 161

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199


>gi|21282241|ref|NP_645329.1| hypothetical protein MW0512 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49482787|ref|YP_040011.1| deoxyadenosine kinase protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49485422|ref|YP_042643.1| putative deoxyadenosine kinase protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57651434|ref|YP_185490.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87161275|ref|YP_493245.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194320|ref|YP_499112.1| hypothetical protein SAOUHSC_00540 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|221141005|ref|ZP_03565498.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|262049600|ref|ZP_06022469.1| hypothetical protein SAD30_0394 [Staphylococcus aureus D30]
 gi|262052442|ref|ZP_06024642.1| hypothetical protein SA930_0278 [Staphylococcus aureus 930918-3]
 gi|284023568|ref|ZP_06377966.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 132]
 gi|295427096|ref|ZP_06819732.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|21203677|dbj|BAB94377.1| MW0512 [Staphylococcus aureus subsp. aureus MW2]
 gi|49240916|emb|CAG39583.1| putative deoxyadenosine kinase protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|49243865|emb|CAG42290.1| putative deoxyadenosine kinase protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57285620|gb|AAW37714.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87127249|gb|ABD21763.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87201878|gb|ABD29688.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|87312669|gb|ABD37700.1| deoxyguanosine kinase [Staphylococcus aureus]
 gi|259159688|gb|EEW44732.1| hypothetical protein SA930_0278 [Staphylococcus aureus 930918-3]
 gi|259162340|gb|EEW46913.1| hypothetical protein SAD30_0394 [Staphylococcus aureus D30]
 gi|269940130|emb|CBI48506.1| putative deoxyadenosine kinase protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|295128884|gb|EFG58514.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|298693888|gb|ADI97110.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus ED133]
 gi|315193921|gb|EFU24315.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus CGS00]
 gi|315196630|gb|EFU26977.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus CGS01]
 gi|329313278|gb|AEB87691.1| Deoxynucleoside kinase [Staphylococcus aureus subsp. aureus T0131]
 gi|329731045|gb|EGG67418.1| deoxyguanosine kinase [Staphylococcus aureus subsp. aureus 21189]
 gi|329731967|gb|EGG68323.1| deoxyguanosine kinase [Staphylococcus aureus subsp. aureus 21193]
          Length = 205

 Score = 75.8 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 105

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199


>gi|283469849|emb|CAQ49060.1| deoxypurine kinase subunit [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 205

 Score = 75.8 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +      S +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSIEFQKFSK 105

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199


>gi|308176132|ref|YP_003915538.1| putative dTMP kinase [Arthrobacter arilaitensis Re117]
 gi|307743595|emb|CBT74567.1| putative dTMP kinase [Arthrobacter arilaitensis Re117]
          Length = 206

 Score = 75.4 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 21/202 (10%)

Query: 8   SFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
              G +GAGK+T I  L ++ L  +     +      +   +  R          F    
Sbjct: 23  VILGPDGAGKSTLIEALTRQLLNERIRARRLANAAARSWLTKFCRR-----SGITFPTFT 77

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +     + R  +V   +  A   G + + DR L      +  R     L L  L   S +
Sbjct: 78  QDFFETSIRGFNVARNMVSAAHSGGLSVMDRHLYCQLVLRRLRGHPSGLLLPWLAAKSTE 137

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                  I+LD+   +  +R+ +R            + + +    + R  +L +A+    
Sbjct: 138 CAR---IILLDIDPHLAYERIVSRGK----------DHETLEYLSESRDEYLRLAQLHG- 183

Query: 187 RCHIVDSAHSFQSVATNILNIV 208
              I+D++ S   +   +  ++
Sbjct: 184 -WIILDASLSTSLLVEQLRLVI 204


>gi|323488470|ref|ZP_08093716.1| hypothetical protein GPDM_03997 [Planococcus donghaensis MPA1U2]
 gi|323397862|gb|EGA90662.1| hypothetical protein GPDM_03997 [Planococcus donghaensis MPA1U2]
          Length = 212

 Score = 75.4 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 83/220 (37%), Gaps = 26/220 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    L    Q +     V   P      E           +E+  +
Sbjct: 5   FITVEGPIGVGKTSLTKALADQNQFQLLKEIVDENPFLNKFYEDI---------EEWSFQ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI- 123
            E + F   R   + ++ +  +   + ++ D  +  +  +      ++++   +++ +I 
Sbjct: 56  TE-MFFLCNRYKQLADIQKKFISNHEPVVADYHIFKNLIFAKRTLPTAEYAKYEAIYKIL 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
           +V    P+  I L   +D  +KR++ R    E     +Y E+     HE     F++   
Sbjct: 115 TVDMPKPNMVIYLHASLDTLMKRIKLRGREFEQMITPEYMEQLAADYHE-----FIERFE 169

Query: 183 NQPDRCHIV--DSAHSFQSVATN-----ILNIVWELVQKR 215
            +     ++  +       V  N     IL+ V   +QKR
Sbjct: 170 REHPEIPVLRFNGD-EIDFVQNNGDLQLILDKVDGTLQKR 208


>gi|15923547|ref|NP_371081.1| deoxypurine kinase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926235|ref|NP_373768.1| hypothetical protein SA0515 [Staphylococcus aureus subsp. aureus
           N315]
 gi|156978886|ref|YP_001441145.1| hypothetical protein SAHV_0555 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315667|ref|ZP_04838880.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255005351|ref|ZP_05143952.2| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|269202180|ref|YP_003281449.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|296276693|ref|ZP_06859200.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MR1]
 gi|13700449|dbj|BAB41746.1| SA0515 [Staphylococcus aureus subsp. aureus N315]
 gi|14246325|dbj|BAB56719.1| similar to deoxypurine kinase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156721021|dbj|BAF77438.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|262074470|gb|ACY10443.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|285816258|gb|ADC36745.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus
           aureus 04-02981]
 gi|312829053|emb|CBX33895.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315128850|gb|EFT84849.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727900|gb|EGG64349.1| deoxyguanosine kinase [Staphylococcus aureus subsp. aureus 21172]
          Length = 205

 Score = 75.4 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +T  P  +   E            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119
           ++  + E + F   R    ++V +  L +G  ++ D  +  +  +     S  +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSPVEFQKFSK 105

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  ++ +MP+  I LD  +D+   R+  R    E       E + ++  +K  + + 
Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161

Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212
           +  ++      ++D+  S      +    +IL+I+  ++
Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199


>gi|328950285|ref|YP_004367620.1| deoxynucleoside kinase [Marinithermus hydrothermalis DSM 14884]
 gi|328450609|gb|AEB11510.1| deoxynucleoside kinase [Marinithermus hydrothermalis DSM 14884]
          Length = 201

 Score = 75.4 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 73/218 (33%), Gaps = 30/218 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG  G GKTT    L   L  +     V   P            L       +  
Sbjct: 1   MYIAIEGPIGVGKTTLARHLADHLNAELLLEVVEENPFLP---------LFYQDPQRYAF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122
           + +   F  +R   +  + +P+L  G  ++ D   D  Y +           L  D    
Sbjct: 52  KVQVF-FLLSRYKQLLPLSQPSLFTGA-VVADYLFDKDYIFASLNLKDAEWELYADLYAH 109

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDIA 181
           +S +   PD TI L  PV + L+R+  R           FER+       +  + +    
Sbjct: 110 LSPKLPAPDLTIYLRAPVPVLLERIHRRGRP--------FEREISPEYLTRLTEAYDRHF 161

Query: 182 RNQPDRCHIVDSA--------HSFQSVATNILNIVWEL 211
              P    ++D+            + VA  +L  V + 
Sbjct: 162 ERYPHPLWVLDNTEINYAENPADREWVAREVLQRVGQA 199


>gi|253575929|ref|ZP_04853263.1| deoxyguanosine kinase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844723|gb|EES72737.1| deoxyguanosine kinase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 207

 Score = 75.1 bits (184), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 33/226 (14%)

Query: 1   MNSGL-FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M     FI+ EG  GAGKTT  ++L            V   P      +           
Sbjct: 1   MKKPCPFIAVEGAIGAGKTTLATMLAERFDFPLLKEIVEENPFLDKFYQNI--------- 51

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLD 118
           +E+  + E + F   R   +E+ ++  +  G  ++ D  +  ++ + Q      +     
Sbjct: 52  EEWAFQLE-MFFLCNRYKQLEDTVKNYVSRGVPVVSDYHIYKNWIFAQRTLQGDKREKYR 110

Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQI 176
            +  +   ++  P+  + +   +   LKR++ R           FE+  D    E+  + 
Sbjct: 111 QIYHLLTDDLPKPNVIVYIRAELATLLKRIEKRGRS--------FEQDIDPGYLERLIED 162

Query: 177 FL----DIARNQPDRCHI-VDSAHSFQSV-----ATNILNIVWELV 212
           +      I   +P+   I +D       V        I+  + E +
Sbjct: 163 YETAITQIQTREPETVVITIDGNM-LDFVEHPEHFEQIVAKIKEHL 207


>gi|297584356|ref|YP_003700136.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10]
 gi|297142813|gb|ADH99570.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10]
          Length = 217

 Score = 75.1 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+  + +    + +     V   P  +   E           DE+  +
Sbjct: 9   FIAVEGPIGVGKTSLATRIANHYKYELLKEIVDENPFLSKFYEDI---------DEWSFQ 59

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLDSLQEI 123
            E + F   R   +E+    +L +GK ++ D  +  +  +A Q  +      + D + +I
Sbjct: 60  TE-MFFLCNRFKQLEDTYEKSLQKGKAVVSDYHIFKNHLFAKQTLKQQHFDKY-DRIYKI 117

Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171
               +  P+  I L   +   L+R++ R    E A   +Y  +     H+
Sbjct: 118 LTDGLPTPNLIIYLHASLPTLLERIKMRGRSMEQAMDPEYLRQLSSDYHQ 167


>gi|485966|emb|CAA83856.1| unknown [Pseudomonas syringae]
          Length = 209

 Score = 75.1 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 33/226 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---------REPGGTPAAEAARHVLL 55
           + I+  GI+GAGK+T    L+R+L  KN  V+V            P           + +
Sbjct: 1   MLITLAGIDGAGKSTQCRHLERWLVSKNIPVNVIDKWDVLKPEVFPECRFIQPDLDQLRV 60

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQ 113
                E  + A  ++++ A        +         ++ + D +     A +    + +
Sbjct: 61  CIAQMEGASRALFLIWSIA-------TVMKQYERDPHQVYILDGYWMKHLASEILYGNDE 113

Query: 114 HLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMI 169
              L  +       V+P  D  +  D+ V     R   R            E  R+    
Sbjct: 114 QWLLGLV------SVLPPADTVLYFDVDV----ARTGVRKQAYTPYECGRNEVSRQAFDK 163

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           H+   +  +D   +      ++D+      V+  +  ++  L+Q R
Sbjct: 164 HQLALKGLMDRWSSSMG-WTVIDANQPEALVSAALQEVLTPLLQGR 208


>gi|221105979|ref|XP_002169331.1| PREDICTED: similar to thymidylate kinase family protein [Hydra
          magnipapillata]
          Length = 78

 Score = 75.1 bits (184), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M  G F+  EG + +GK+T   LL  +L        + R P  + A     +  ++   +
Sbjct: 1  MGRGAFVVLEGCDKSGKSTQCRLLVDYLNSLGKKTELWRFPERSTAIGQIINGYITKKNE 60

Query: 61 EFGAEAEAIVFAAARLDHV 79
              +A  ++F+A R + V
Sbjct: 61 -LHDKAVHLMFSANRWELV 78


>gi|302657864|ref|XP_003020643.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517]
 gi|291184499|gb|EFE40025.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517]
          Length = 130

 Score = 74.7 bits (183), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 12/123 (9%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G  +    A  ++F+A R +     IR  +  G  ++ DR+  S   Y   +++ +   L
Sbjct: 8   GEIQLDDHAVHLLFSANRWEAAAQ-IRQDIESGITVIVDRYSYSGAVYSAAKENKELQ-L 65

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D      V    PD    L++ +++   R             + +E   V + +K  ++F
Sbjct: 66  DWAWRPEVGLPRPDIWFFLNISIEVAAAR--------GGYGTERYE--TVNLQKKVGKLF 115

Query: 178 LDI 180
           L +
Sbjct: 116 LSL 118


>gi|228904780|ref|ZP_04068834.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
 gi|228854794|gb|EEM99398.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222]
          Length = 180

 Score = 74.7 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 17/188 (9%)

Query: 30  RKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM 88
            + Y+V  +      TP     R  L   G    G  A   + AA +   + N       
Sbjct: 3   ERGYNVEQSEFHRYDTPTGGLIRQFL--DGEYNPGQLAIECIMAADKYAQL-NWFEELAE 59

Query: 89  EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148
           +  +L+ DR+L S   Y            + L  +      P+  I LD+  +  +KR  
Sbjct: 60  KLDVLILDRYLVSQLVYSTANGVDIDFTANLLDRM----PEPNFQIFLDIEPEESMKRKG 115

Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--NQPDRCHIVDSAHSFQSVATNILN 206
                      D +E  D  +  + R ++L   +   +     I+D   + + +   IL 
Sbjct: 116 K------HGENDKYES-DKELLTRARDLYLRYMKLEEEDGNAMILDGTLAVEELHQQILE 168

Query: 207 IVWELVQK 214
               L+ +
Sbjct: 169 RTLSLLTE 176


>gi|212225008|ref|YP_002308244.1| hypothetical protein TON_1856 [Thermococcus onnurineus NA1]
 gi|212009965|gb|ACJ17347.1| Hypothetical protein TON_1856 [Thermococcus onnurineus NA1]
          Length = 222

 Score = 74.3 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 82/236 (34%), Gaps = 50/236 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+    I   G +G GKTT   +L   L+   Y+            +     +    G+ 
Sbjct: 1   MDPPRLICIIGPDGTGKTTQAKMLIEKLREMGYEYEYRWMRFHHFISLPVLALARLMGLT 60

Query: 61  EFGAEAE--------------------AIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
           E     +                      ++    L  +  +  P  ++ K L+CDRF+ 
Sbjct: 61  EIQTLPDGRKIGYHHFYRSKLISTVYPITLYLDMLLAMIFKIYIPLKVQRKRLVCDRFIY 120

Query: 101 SSYAYQGERDSSQHLFLDSLQ----EISVQEVM--P-D-CTIILDLPVDIGLKRVQNRYS 152
            +            + LD+++    + + + +   P D  TI+L  P +   +R      
Sbjct: 121 DTLV-------DLTIDLDNIEFDNSKTAKKFLKLIPRDCLTILLIAPYEKIKER------ 167

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            RE    D +         KR + ++++ +  P     +D++   + V   I+ IV
Sbjct: 168 -REDLKFDKY-------LRKRIETYMELKKRFPQ-LVTIDASSEVEKVHNQIVEIV 214


>gi|23097471|ref|NP_690937.1| deoxypurine kinase subunit [Oceanobacillus iheyensis HTE831]
 gi|22775694|dbj|BAC11972.1| deoxypurine kinase subunit [Oceanobacillus iheyensis HTE831]
          Length = 216

 Score = 74.3 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 30/228 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    L    +       V   P      E            E+  +
Sbjct: 6   FIAIEGPIGIGKTSLAKKLSDHFEFHLLKEIVEENPFLGKFYENI---------SEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E + F   R   +E++ +  L + + ++ D  +  +  +   + + Q   L+  ++I  
Sbjct: 57  TE-MFFLCNRFKQLEDINKDYLQQEQPVIADYHITKNMIF--AKRTLQQDKLEKYEKIYQ 113

Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF-LD 179
                   P+  I +   +D  LKR++ R    E     +Y  +          + F L+
Sbjct: 114 ILTEDIPTPNILIYIHADLDTILKRIRMRGREVEQHIDPEYLRQLSAD-----YEAFMLE 168

Query: 180 IARNQPDR-CHIVDSAHSFQSVA-----TNILNIVWELVQKRVSPLSS 221
             R  P      ++       V        I+  V  L+ ++   L S
Sbjct: 169 FERTHPHIPVLRINGDQ-MDFVQYQDHLEQIIGDVESLINEQCRALPS 215


>gi|326675692|ref|XP_699055.4| PREDICTED: UMP-CMP kinase 2, mitochondrial, partial [Danio rerio]
          Length = 561

 Score = 74.3 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 44/218 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++  GKTT    L++ L        +   P                  D      
Sbjct: 221 IVIEGLDATGKTTLTEALRQSLNA----TLLKSPPQCLAPFRQ--------RFDSEPPLI 268

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +A        ++ + +L     ++ DR+  S+ AY           +++L      
Sbjct: 269 RRAFYALGNYITATHIAKESLRAP--VIVDRYWHSTAAYAIATAVGGR--VENL------ 318

Query: 127 EVMPDCTIIL--------------DLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHE 171
              PD  + +               +  +  ++R+++R   + +      E + + +   
Sbjct: 319 -PKPDSELYVWPEDLLQPDLVLLLTVSPEERVRRLRDRGQDKTTEEA---ELEINQLFRL 374

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           K  + +  I    P  C  VD++ S Q V   + +++ 
Sbjct: 375 KVEEAYKRI--QNPS-CITVDASPSPQEVLKQVHHLIR 409


>gi|94264557|ref|ZP_01288343.1| hypothetical protein MldDRAFT_5200 [delta proteobacterium MLMS-1]
 gi|93455042|gb|EAT05273.1| hypothetical protein MldDRAFT_5200 [delta proteobacterium MLMS-1]
          Length = 432

 Score = 73.9 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 90/234 (38%), Gaps = 42/234 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---TREPGGTPAAEAARHV----- 53
             G+ ++ EGI+G+GK+T I +L + + ++  ++ V       G    +   R +     
Sbjct: 217 KKGIVVAVEGIDGSGKSTFIDVLNKSIPKEGRELFVQKSMAGRGFWRYSNKIRTIWRRSC 276

Query: 54  --------LLSCGVDEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                   +L  G+       E   + F   R   ++N        GK ++ DR+    Y
Sbjct: 277 DRPGKMNSVLKNGLLPIVFIIEIGSLYFLFLRSRQLKN-------SGKNVIFDRYACLHY 329

Query: 104 AYQGE----RDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
             Q      R   ++L++  L  +       PD  + L++   +  +R +  +       
Sbjct: 330 IRQRVHNKNRFVGKNLYIQLLYLLSVRWFPSPDVFVYLNVDPLVAYERKKEDHVDELMEK 389

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              + ++ V +++K  + F            IVDS    + + +  L++ W+ +
Sbjct: 390 YLIYNKEVVPLYDKITECF------------IVDSTLPTEVIVSRFLSVYWQRL 431


>gi|260752279|ref|YP_003225172.1| hypothetical protein Za10_0034 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258551642|gb|ACV74588.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 256

 Score = 73.9 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 45/239 (18%)

Query: 3   SGLFISFEGIEGAGKTTH----ISLLKRFLQRKNYDVHVTREPGGTPAAE------AARH 52
           +G  I+  G +G+GK++     I+ ++++   K Y + +     G    +         +
Sbjct: 25  TGKLIALVGCDGSGKSSLTTDLIAAIQKYTPVKRYYLGLGSGDLGRKIGQIPVVGSWIEN 84

Query: 53  VLLSCGVDEFGA--------EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           +L                   A  + F + R       +R AL  G  ++ DR+  +  A
Sbjct: 85  LLKQRATTTRTKGKKIPGVMTALVVYFFSLRRFCSYLKMRRALKAGITVITDRYPQAEIA 144

Query: 105 YQGERDSSQHL-----FLDSL--QEISVQ----EVMPDCTIILDLPVDIGLKRVQNRYSL 153
            Q +            F+  L   E ++        PD  + LD+  +    R       
Sbjct: 145 GQCDGPGLSAAKAGNRFVSWLVRSEAALYQRMASFQPDLVLRLDVDPETAHAR------- 197

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    ++    K  ++           A  +     ++D+   +++V  +I+ +V   +
Sbjct: 198 KPDHDIEALRIKSEIMQHLTFGG----AHME-----VIDATRPYKAVWKDIVRLVQPYL 247


>gi|172056060|ref|YP_001812520.1| deoxynucleoside kinase [Exiguobacterium sibiricum 255-15]
 gi|171988581|gb|ACB59503.1| deoxynucleoside kinase [Exiguobacterium sibiricum 255-15]
          Length = 209

 Score = 73.9 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI+ EG  G GKT+  + +            V   P      E           +E+  
Sbjct: 1   MFITVEGPIGVGKTSLANAISHHFSFSMLREIVEENPFLGKFYEDI---------EEWSF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           + E + F   R   ++++ R  L + + ++ D  +  +  +     S +   LD  ++I 
Sbjct: 52  QTE-MFFLCNRFKQLDDIERHYLSKQRSVVADYHIFKNLIF--AHRSLKVEHLDKYEQIY 108

Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169
              +     PD  I LD  +D  +KRV  R    E      Y E+     
Sbjct: 109 SILTTDMPKPDAVIYLDASIDTLMKRVALRGREIEENMSRAYLEQLAADY 158


>gi|56552213|ref|YP_163052.1| hypothetical protein ZMO1317 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543787|gb|AAV89941.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 256

 Score = 73.9 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 45/239 (18%)

Query: 3   SGLFISFEGIEGAGKTTH----ISLLKRFLQRKNYDVHVTREPGGTPAAE------AARH 52
           +G  I+  G +G+GK++     I+ ++++   K Y + +     G    +         +
Sbjct: 25  TGKLIALVGCDGSGKSSLTTDLIAAIQKYTPVKRYYLGLGSGDLGRKIGQIPVVGSWIEN 84

Query: 53  VLLSCGVDEFGA--------EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           +L                   A  + F + R       +R AL  G  ++ DR+  +  A
Sbjct: 85  LLKQRATTTRTKGKKIPGVMTALVVYFFSLRRFCSYLKMRRALKAGITVITDRYPQAEIA 144

Query: 105 YQGERDSSQHL-----FLDSL--QEISVQ----EVMPDCTIILDLPVDIGLKRVQNRYSL 153
            Q +            F+  L   E ++        PD  + LD+  +    R       
Sbjct: 145 GQCDGPGLSAAKAGNRFVSWLVRSEAALYQRMASFQPDLVLRLDVDPETAHAR------- 197

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +    ++    K  ++           A  +     ++D+   +++V  +I+ +V   +
Sbjct: 198 KPDHDIEALRIKSEIMQHLTFGG----AHME-----VIDATRPYKAVWKDIVRLVQPYL 247


>gi|15679111|ref|NP_276228.1| hypothetical protein MTH1100 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622201|gb|AAB85589.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 196

 Score = 73.5 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 35/211 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAE 67
            +G++GAGK TH  L++R    +   V     P    P  + AR  LL  G         
Sbjct: 2   IDGLDGAGKDTHAELIRRRYLERGEHVVFRSHPEDDNPYGKRAREALLRGGKVN---HIR 58

Query: 68  AIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           A +F A  LD + ++             L+  R+L    AY              L  + 
Sbjct: 59  AAIFYA--LDVIRSLWLYHWRSNPGPDTLIFSRYLM-GVAY------LPGPLSSVLYRL- 108

Query: 125 VQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +  V+P  T      LD+  +  L+R+  R        LD             R+  L +
Sbjct: 109 LSRVLP--TTEYMFFLDVSPEESLRRLMERDEHEMFENLDDL--------TSTREKALRL 158

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A    D  +I+++    + V + I  I+  L
Sbjct: 159 A----DGWYIINTEDPIEDVQSRIDEILDRL 185


>gi|126649231|ref|XP_001388288.1| thymidylate kinase [Cryptosporidium parvum Iowa II]
 gi|126117126|gb|EAZ51226.1| thymidylate kinase [Cryptosporidium parvum Iowa II]
          Length = 166

 Score = 73.1 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 54/142 (38%), Gaps = 16/142 (11%)

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   +   ++F A R + + N I+  L  G  ++CDR+  S  AY     +     
Sbjct: 7   GKSIKMAPQVSHLLFTANRWE-LNNYIKENLENGIDVVCDRYSFSGIAYSSGAINLDF-- 63

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            +  +      + PD  + L++ +D+         S R    ++ +E  ++      R++
Sbjct: 64  -EWCKSREQGLISPDIVVFLEVNLDLS--------STRSGFGVEIYE--NISDQISVRKV 112

Query: 177 FLDIARNQPDRCHIVDSAHSFQ 198
           +   +         ++++ S  
Sbjct: 113 YQKFS--NYSFWRNINASQSPD 132


>gi|241761714|ref|ZP_04759801.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374022|gb|EER63555.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 256

 Score = 72.8 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 83/245 (33%), Gaps = 57/245 (23%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I+  G +G+GK++  + L   +Q+      V R   G  + +  R +     +   
Sbjct: 25  TGKLIALVGCDGSGKSSLTTDLIAAIQKY---TPVKRYYLGLGSGDLGRKI---GQIPVV 78

Query: 63  GAEAEAIV------------------------FAAARLDHVENVIRPALMEGKILLCDRF 98
           G+  E ++                        F + R       +R AL  G  ++ DR+
Sbjct: 79  GSWIENLLKQRATTTRTKGKKIPGVMTALVVYFFSLRRFCSYLKMRRALKTGITVITDRY 138

Query: 99  LDSSYAYQGERDSSQHL-----FLDSL--QEISVQ----EVMPDCTIILDLPVDIGLKRV 147
             +  A Q +            F+  L   E ++        PD  + LD+  +    R 
Sbjct: 139 PQAEIAGQCDGPGLSAAKAGNRFVSWLVRSEAALYQRMASFQPDLVLRLDVDPETAHAR- 197

Query: 148 QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
                 +    ++    K  ++           A  +     ++D+   +++V  +I+ +
Sbjct: 198 ------KPDHDIEALRIKSEIMQHLTFGG----AHME-----VIDATRPYKAVWKDIVRL 242

Query: 208 VWELV 212
           V   +
Sbjct: 243 VQPYL 247


>gi|37680376|ref|NP_934985.1| thymidylate kinase [Vibrio vulnificus YJ016]
 gi|37199123|dbj|BAC94956.1| thymidylate kinase [Vibrio vulnificus YJ016]
          Length = 206

 Score = 72.8 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 18/154 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI +EG++  GKTT  S   +    +++   V          E  R ++     D
Sbjct: 1   MNK--FIVYEGLDACGKTTLSSRYAQERNTRSHFAIV-------QEGEQLRELI-----D 46

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--D 118
              ++  A++F           +  A   G  ++ DR++ S+ AYQ      + + +  +
Sbjct: 47  SNQSKESALLFFMLNNFLKSYEVAQARESGD-VILDRYIFSTLAYQTILIGEERVKVIFE 105

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           +L ++    ++PD  + +         R++ R  
Sbjct: 106 AL-DVKNNILLPDAIVFVKADAKTINNRIKARGG 138


>gi|319655044|ref|ZP_08009114.1| deoxyguanosine kinase [Bacillus sp. 2_A_57_CT2]
 gi|317393268|gb|EFV74036.1| deoxyguanosine kinase [Bacillus sp. 2_A_57_CT2]
          Length = 213

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 26/220 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +    Q       V   P      E           +E+  +
Sbjct: 6   FITVEGPIGVGKTSLAKAISEKFQYALLKEIVDENPFLGKFYENI---------EEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEIS 124
            E + F   R   + ++    L + K ++ D  +  +  + Q   + +++     + +I 
Sbjct: 57  TE-MFFLCNRYKQLVDINNHYLAQKKPVVADYHIFKNLIFAQRTLNQNEYQKYLKIYDIL 115

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
             +   P+  I L+  ++  L R++ R    E      Y E+  +       +      R
Sbjct: 116 TGDMPKPNVIIYLNASLETLLDRIELRGREIEKNISPLYLEQLSLDYETAMNE----FER 171

Query: 183 NQPDRCHIV--DSAHSFQSVATN-----ILNIVWELVQKR 215
             PD   ++  +       V        I + +   ++KR
Sbjct: 172 QHPD-IPVIRFNGDQ-LDFVKNESDLMHIFDTLSTSLKKR 209


>gi|11498906|ref|NP_070137.1| thymidylate kinase, putative [Archaeoglobus fulgidus DSM 4304]
 gi|2649268|gb|AAB89936.1| thymidylate kinase, putative [Archaeoglobus fulgidus DSM 4304]
          Length = 243

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 72/211 (34%), Gaps = 33/211 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI  +G++GAGK TH   ++R    +   +  T  P  +     A+  LL  G  +F  
Sbjct: 57  RFIVIDGMDGAGKDTHAEFVRRRYAERGSVIVRTH-PSDSLFGRVAKASLLRRG--KFFH 113

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              AI +    +  +           + ++  R+L       G        +   L    
Sbjct: 114 LMAAIFYFFDVIYSLLR----YYGRAETVIFVRYL-------GGVLYLPERYARVLYRF- 161

Query: 125 VQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + V+P  T      L+   ++ ++RV  R              +++    + R+    I
Sbjct: 162 FRSVLP--TSPYMFYLEAEPEVCMERVARRSESEMF--------ENIEDFRRVRERAFRI 211

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +        +++    +     I  I+ EL
Sbjct: 212 LKG----WKFINTNRPIEETRREIERILSEL 238


>gi|315659097|ref|ZP_07911962.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590]
 gi|315495821|gb|EFU84151.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590]
          Length = 226

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 85/221 (38%), Gaps = 27/221 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        V   P  +   E            
Sbjct: 22  MNKP-FIAIEGPIGVGKSSLAHQLSQTLDYYEEKEIVDENPFLSDFYEDI---------S 71

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++    L  G  ++ D  +  +  +     ++S+    + 
Sbjct: 72  KWSFQTE-MFFLCNRYKQLNDL--KTLQHG--VVSDYHIYKNKIFARNTLNASEFDKFER 126

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ +P+  I LD  + +  +R+  R    ES    + E   ++  ++    F 
Sbjct: 127 IYDIITEDLVLPNMIIFLDAELSVLKQRIAQRQRSFES----HIEDDYLLTLQQEYHHFY 182

Query: 179 DIARNQPDRCHIVDSAHSFQSVA-----TNILNIVWELVQK 214
           +  + Q  R   +D+ H    V       +IL  +  L+ +
Sbjct: 183 ETLKAQGARVIQIDTTH-IDFVHNPEDYADILTQIKPLLGE 222


>gi|67590947|ref|XP_665517.1| thymidylate kinase [Cryptosporidium hominis TU502]
 gi|54656244|gb|EAL35286.1| thymidylate kinase [Cryptosporidium hominis]
          Length = 165

 Score = 72.4 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 16/142 (11%)

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   +   ++F A R + + N I+  L  G  ++CDR+  S  AY     +     
Sbjct: 7   GKSIKMAPQVSHLLFTANRWE-LNNYIKENLENGIDVVCDRYSFSGIAYSSGAINLDF-- 63

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            +  +      + PD  + L   V++GL       S R    ++ +E  ++      R++
Sbjct: 64  -EWCKSREQGLISPDIVVFL--EVNLGLS------STRSGFGVEIYE--NISDQISVRKV 112

Query: 177 FLDIARNQPDRCHIVDSAHSFQ 198
           +   +         ++++ S  
Sbjct: 113 YQKFS--NYSFWRNINASQSPD 132


>gi|289551637|ref|YP_003472541.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus
           lugdunensis HKU09-01]
 gi|289181168|gb|ADC88413.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus
           lugdunensis HKU09-01]
          Length = 205

 Score = 72.4 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 85/221 (38%), Gaps = 27/221 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        V   P  +   E            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHQLSQTLDYYEEKEIVDENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++    L  G  ++ D  +  +  +     ++S+    + 
Sbjct: 51  KWSFQTE-MFFLCNRYKQLNDL--KTLQHG--VVSDYHIYKNKIFARNTLNASEFDKFER 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ +P+  I LD  + +  +R+  R    ES    + E   ++  ++    F 
Sbjct: 106 IYDIITEDLVLPNMIIFLDAELSVLKQRIAQRQRSFES----HIEDNYLLTLQQEYHHFY 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVA-----TNILNIVWELVQK 214
           +  + Q  R   +D+ H    V       +IL  +  L+ +
Sbjct: 162 ETLKAQGARVIQIDTTH-IDFVHNPEDYADILTQIKPLLGE 201


>gi|55962459|emb|CAI11968.1| novel protein similar to mouse thymidylate kinase family
           LPS-inducible member (Tyki) [Danio rerio]
          Length = 401

 Score = 72.4 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 44/213 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++  GKTT    L++ L        +   P                  D      
Sbjct: 216 IVIEGLDATGKTTLTEALRQSLNA----TLLKSPPQCLAPFRQ--------RFDSEPPLI 263

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +A        ++ + +L     ++ DR+  S+ AY           +++L      
Sbjct: 264 RRAFYALGNYITATHIAKESLRAP--VIVDRYWHSTAAYAIATAVGGR--VENL------ 313

Query: 127 EVMPDCTIIL--------------DLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHE 171
              PD  + +               +  +  ++R+++R   + +      E + + +   
Sbjct: 314 -PKPDSELYVWPEDLLQPDLVLLLTVSPEERVRRLRDRGQDKTTEEA---ELEINQLFRL 369

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           K  + +  I    P  C  VD++ S Q V   +
Sbjct: 370 KVEEAYKRI--QNPS-CITVDASPSPQEVLKQV 399


>gi|325964882|ref|YP_004242788.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470969|gb|ADX74654.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 201

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 31/213 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   GI+G+GK+T    L   +Q +     +        A   A  V  +       A
Sbjct: 1   MLIVLTGIDGSGKSTAAQALVSAVQARGGAALLL----NNHAGRRAMSVFSAKLGIRLPA 56

Query: 65  EAEAIVFAAARLDHVENVIRPALME------GKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            A      A   + +  V    L          +++ DR L    A +  +   +   L 
Sbjct: 57  RA------ADAAETIFRVWNVLLNHLRTSRFDGLVVMDRHLYCQLALRAAKGLPRGRLLP 110

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L          D  + L++   +  +R++ R S  ES        +D+   +     + 
Sbjct: 111 WLLAALPAP---DAVVHLEVDPRLAHERIKARGSDAES-------LEDLAAFD---DGYR 157

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +    P     VD++     +   +  ++ +L
Sbjct: 158 RL-PEYPQ-FVTVDASVPAPELVRRLDALISQL 188


>gi|311028948|ref|ZP_07707038.1| deoxyguanosine kinase [Bacillus sp. m3-13]
          Length = 150

 Score = 72.0 bits (176), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 16/155 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +    Q +     V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKKIAEEFQYQLLKEIVDENPFLGKFYENI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---LQE 122
            E + F   R   +E++ +  L + K ++ D  +  +  +   + + +    D    + +
Sbjct: 57  TE-MFFLCNRYKQLEDIDQHHLKQHKPVIADYHILKNLIF--AKRTLKDKQYDKYLRIYD 113

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           I  ++   P+  I L+  +D  L R++ R    E 
Sbjct: 114 ILTEDMPRPNVIIYLNASLDTLLTRIEKRGRDIEK 148


>gi|299542076|ref|ZP_07052392.1| hypothetical protein BFZC1_24018 [Lysinibacillus fusiformis ZC1]
 gi|298725391|gb|EFI66039.1| hypothetical protein BFZC1_24018 [Lysinibacillus fusiformis ZC1]
          Length = 211

 Score = 72.0 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 79/220 (35%), Gaps = 26/220 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EG  G GKT+    +            V   P      E           +E+  +
Sbjct: 5   FVTVEGPIGVGKTSLSKEIAATFNYHLLKEIVDENPFLNKFYENI---------EEWSFQ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124
            E + F   R   + ++ +  L   K ++ D  +  +  +     +  ++   + +  I 
Sbjct: 56  TE-MFFLCNRYKQLTDIKKFRLAHAKPVVADYHIFKNLIFAKRTLAPTEYEKYEEIYRIL 114

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  +P+  + L   V+  +KR+  R    E     DY E+     H    + F  +  
Sbjct: 115 TKDMPVPNVVVYLHASVETLMKRIAMRGREFEKMISRDYMEQLVADYHSFI-EHFESM-- 171

Query: 183 NQPDRCHIV--DSAHSFQSVA-----TNILNIVWELVQKR 215
             P+   ++  +       V       ++L I+ + +Q+R
Sbjct: 172 -HPE-IPVIRFNGDQ-LDFVKNPNDLNHVLKIIKDTLQQR 208


>gi|150391767|ref|YP_001321816.1| deoxyguanosine kinase [Alkaliphilus metalliredigens QYMF]
 gi|149951629|gb|ABR50157.1| deoxyguanosine kinase [Alkaliphilus metalliredigens QYMF]
          Length = 221

 Score = 72.0 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 14/174 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +  FIS EG  G GKTT  ++L + L        V   P      E           +
Sbjct: 1   MKN-TFISVEGPIGVGKTTLTNILAKHLDSFALKEIVEDNPYLKSFYENV---------E 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           E+  + E + F   R+  +E+V +  L  G  ++ D  +  +  + G    + +      
Sbjct: 51  EYAFQTE-MFFLCNRIKQLEDVQKKYLDRGLSVVSDYNIIKNLVFAGLNLQNGKFQKYRQ 109

Query: 120 LQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171
           +  I + Q    D  I L    D+ +KR++ R    E     DY +R +     
Sbjct: 110 VYAILADQLPQSDIIIYLYGDTDLLMKRIEMRDRPFERNMSRDYIDRLNREYQH 163


>gi|116668624|ref|YP_829557.1| thymidylate kinase [Arthrobacter sp. FB24]
 gi|116608733|gb|ABK01457.1| thymidylate kinase [Arthrobacter sp. FB24]
          Length = 206

 Score = 72.0 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 67/219 (30%), Gaps = 41/219 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+  L I   GI+GAGKTT         +       + R   G               + 
Sbjct: 1   MSHPLLIVLTGIDGAGKTTAARAAVEAARLAGGKALLLRNHAGRR------------NMT 48

Query: 61  EFGAEAEAIVFAAARLDHVENVIR-------PALMEG--KILLCDRFLDSSYAYQGERDS 111
           ++   +   +      D +E  IR        A       +++ DR L    A +  R  
Sbjct: 49  QWSERSGIHL-NRRVADALETGIRTINVLVSHARARNFSGLVVMDRHLYCQLALRSVRGL 107

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                L     +      PD  I  D+  +  LKR+  R +          + + +    
Sbjct: 108 PPGRLLRW---LLRHLPAPDLVIHFDVSPEQALKRILLRGT----------DTETLEELR 154

Query: 172 KRRQIFLDIARNQPD--RCHIVDSAHSFQSVATNILNIV 208
              + +  +    P+      +D+  +   V   + + +
Sbjct: 155 ALGEAYRAL----PEFAGFVRIDAGGAQDEVLAALTDTI 189


>gi|9631984|ref|NP_048773.1| hypothetical protein PBCV1_A416R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620088|gb|AAC96784.1| contains ATP/GTP-binding site motif A; similar to Bacillus subtilus
           24.1 kDa protein, corresponds to Swiss-Prot Accession
           Number P37530 [Paramecium bursaria Chlorella virus 1]
          Length = 188

 Score = 72.0 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 37/217 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS +G+ G+GKTT    L   L+++ + V   REP G    +       +        
Sbjct: 1   MIISVDGLMGSGKTT----LLDRLEKRGFKVF--REPVGEW--KFLNKFYKNPKKYALAL 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGERDSSQHLFLD 118
           + E +   +                  I+  +R      ++ +       + +     + 
Sbjct: 53  QLEIL--VSFTKYTFTE---------DIVFTERCPQVSHYVFAKM--LSAKGTLTDEEMA 99

Query: 119 SLQEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + +     +    PD  I L  P+D+  +R++ R         +Y ER      EK   I
Sbjct: 100 TYKNFYDKMNLWKPDVHIFLKCPIDVCEQRLKRRSDSYTIDT-EYMER-----LEKYYSI 153

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           F     + P     +D++ +   V  + +N V + V+
Sbjct: 154 FNKYTNSTP--IKFIDASKNEDEVEEDFMNQVKDFVE 188


>gi|169825644|ref|YP_001695802.1| hypothetical protein Bsph_0030 [Lysinibacillus sphaericus C3-41]
 gi|168990132|gb|ACA37672.1| Hypothetical yaaG protein [Lysinibacillus sphaericus C3-41]
          Length = 223

 Score = 72.0 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 82/220 (37%), Gaps = 26/220 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EG  G GKT+    +            V   P      E           +E+  +
Sbjct: 17  FVTVEGPIGVGKTSLSKEIAATFNYHLLKEIVDENPFLNKFYENI---------EEWSFQ 67

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124
            E + F   R   + ++ +  L   K ++ D  +  +  +     +S ++   + + +I 
Sbjct: 68  TE-MFFLCNRYKQLTDIKKFRLAHAKPVVADYHIFKNLIFAKRTLASTEYEKYEEIYKIL 126

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  +P+  + L   V+  +KR+  R    E     DY E+  +  H    + F    +
Sbjct: 127 TKDMPVPNVVVYLHASVETLMKRIAMRGRDFEKMISRDYMEQLVIDYHSFI-EHFE---K 182

Query: 183 NQPDRCHIV--DSAH-----SFQSVATNILNIVWELVQKR 215
             P+   ++  +        +   +   +L I+ + +QKR
Sbjct: 183 MHPE-IPVIRFNGDQLDFVKNPDDL-NYVLKIIKDTLQKR 220


>gi|170721760|ref|YP_001749448.1| hypothetical protein PputW619_2585 [Pseudomonas putida W619]
 gi|169759763|gb|ACA73079.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 205

 Score = 71.6 bits (175), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 77/217 (35%), Gaps = 18/217 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           M+  LF+S +G +G GKTT +  + + L+     V    E    P            + S
Sbjct: 1   MSRSLFVSMDGPKGTGKTTLLEAVTQALRADGLKVIRICERKSDPFRAQTMALVNQFVRS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D   A  E   FA +R   +   + P    G I+L DR+  S  A+   R       
Sbjct: 61  PSPDLELAVCER--FAQSRAW-ISQQVLPRQPPGSIILIDRWYPSEAAF---RRLIPFPE 114

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L  I+    +PD ++ +    DI   R   R     S  +  FE      H    Q 
Sbjct: 115 ILRLN-IASNVRVPDLSVGVVTAPDISWARATARTRGLSSTVMHRFEE-----HVACTQA 168

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           F            +  +  + +     +++ +  +++
Sbjct: 169 FERAVAENG--WLLCRNEGTIEDATLQVVSAIQGVLR 203


>gi|126652943|ref|ZP_01725085.1| Deoxyguanosine kinase [Bacillus sp. B14905]
 gi|126590273|gb|EAZ84395.1| Deoxyguanosine kinase [Bacillus sp. B14905]
          Length = 223

 Score = 71.2 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 80/220 (36%), Gaps = 26/220 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EG  G GKT+    +            V   P      E           +E+  +
Sbjct: 17  FVTVEGPIGVGKTSLSKEIAATFNYHLLKEIVDENPFLNKFYENI---------EEWSFQ 67

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124
            E + F   R   + ++ +      K ++ D  +  +  +     +S ++   + + +I 
Sbjct: 68  TE-MFFLCNRYKQLTDIKKFRFAHAKPVVADYHIFKNLIFAKRTLASTEYEKYEEIYQIL 126

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
            ++  +P+  + L   V+  +KR+  R    E     DY E+     H    + F    +
Sbjct: 127 TKDMPVPNVVVYLHASVETLMKRIAMRGRDFEKMISRDYMEQLVTDYHSFI-EHFE---K 182

Query: 183 NQPDRCHIV--DSAH-----SFQSVATNILNIVWELVQKR 215
             P+   ++  D        +   +   +L I+ + +QKR
Sbjct: 183 MHPE-IPVIRFDGDQLDFVKNPDDL-NYVLKIIKDTLQKR 220


>gi|223042779|ref|ZP_03612827.1| deoxynucleoside kinase family protein [Staphylococcus capitis SK14]
 gi|314932785|ref|ZP_07840154.1| deoxynucleoside kinase family protein [Staphylococcus caprae C87]
 gi|222443633|gb|EEE49730.1| deoxynucleoside kinase family protein [Staphylococcus capitis SK14]
 gi|313654466|gb|EFS18219.1| deoxynucleoside kinase family protein [Staphylococcus caprae C87]
          Length = 205

 Score = 71.2 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 86/223 (38%), Gaps = 27/223 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++   +L + L        V   P  +   +           +
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLARMLSQTLGYYEEKEIVDENPFLSDFYDDI---------E 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   ++++   AL +G  ++ D  +  +  +     DS +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQIQDI--EALEQG--VVSDYHIHKNKIFANNTLDSKEFDKFSR 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +D+   R+  R    E       E   ++  ++  + + 
Sbjct: 106 IYDILTEDLEMPNMIIFLDADLDVLKARIAKRNRNFEHT----IEDDYLLKLKQDYKAYY 161

Query: 179 DIARNQPDRCHIVDSAHSFQSV-----ATNILNIVWELVQKRV 216
           +  +N+      +D+      V        IL ++  ++   +
Sbjct: 162 ESLKNEGANVIRIDTT-EKDFVNNSDDYKEILELIKPMIGDNI 203


>gi|295702256|ref|YP_003595331.1| deoxyguanosine kinase [Bacillus megaterium DSM 319]
 gi|294799915|gb|ADF36981.1| deoxyguanosine kinase [Bacillus megaterium DSM 319]
          Length = 211

 Score = 71.2 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FIS EG  G GKT+    + +  Q +     V   P      E           +E+  +
Sbjct: 6   FISVEGPIGVGKTSLAKEIAQAFQFEILKEIVDENPFLGKFYENI---------NEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSLQEI 123
            E + F   R   +E++ +  L   K ++ D  +  +   A Q  +D     ++     +
Sbjct: 57  TE-MFFLCNRYKQLEDIQKGFLSYKKPVVADYHIMKNMIFAEQTLKDEQYKKYVQIFHIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     P+  I L+  +D  LKR++ R    E     ++  +    +EK    F    +N
Sbjct: 116 TADMPAPNIIIYLNASLDTLLKRIKMRGREIERNIDPHYLARLSDDYEKAMSAFE---QN 172

Query: 184 QPD-RCHIVDSAHSFQSVA-----TNILNIVWELVQKR 215
            PD      D       V        IL+ V E + KR
Sbjct: 173 NPDVTILRYDGD-EIDFVQNKQHLNRILSEVQESMLKR 209


>gi|326201499|ref|ZP_08191370.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
 gi|325988099|gb|EGD48924.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782]
          Length = 233

 Score = 71.2 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 15/188 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVD 60
             G+ I  EGI G+GK+  I+ +   L  + Y+V +          E  R ++ + C + 
Sbjct: 11  QKGVLIVCEGISGSGKSESIAKIYNHLSAQ-YNVQIVEWNSN----EKIRKIVKALCNLK 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              +   +I+   +        I PAL +G I++ DR++ ++      RD      +   
Sbjct: 66  MLTSTIYSILQWISFCIDYFTRILPALNKGNIVIADRYVYTAL----TRDIVNGSSVLPG 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDY---FERKDVMIHEKRRQ 175
           + +      P+     D   ++  +R+  R       +  +      + K++    K R 
Sbjct: 122 KYLCTLVRKPEMLFFYDTNCELCYERILTRGKALFHTNKYIKRNKLLKNKNLYYLMKLRG 181

Query: 176 IFLDIARN 183
            ++ I R 
Sbjct: 182 EYMKILRK 189


>gi|242372783|ref|ZP_04818357.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W1]
 gi|242349556|gb|EES41157.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W1]
          Length = 220

 Score = 70.8 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 75/196 (38%), Gaps = 21/196 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        V   P  +   +           +
Sbjct: 16  MNKP-FIAIEGPIGVGKSSLAHKLSQTLNYYEEREIVDENPFLSDFYDDI---------E 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++   AL +G  ++ D  +  +  +     D  +      
Sbjct: 66  KWSFQTE-MFFLCNRYKQIRDL--EALDQG--VVSDYHIHKNKIFASNTLDEKEFDKFSR 120

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +DI   R+  R    E       E   ++  +K  + + 
Sbjct: 121 IYDILTEDLEMPNMIIFLDADLDILKSRIAKRNRDFEHT----IEDDYLLTLKKDYKAYY 176

Query: 179 DIARNQPDRCHIVDSA 194
           +  + +     ++D+ 
Sbjct: 177 ESLKKEGANVILIDTT 192


>gi|213965042|ref|ZP_03393241.1| thymidylate kinase [Corynebacterium amycolatum SK46]
 gi|213952578|gb|EEB63961.1| thymidylate kinase [Corynebacterium amycolatum SK46]
          Length = 176

 Score = 70.8 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G     A A A++FA  R +     I  A  E  +L+ DR++ S+ AY     +     +
Sbjct: 24  GDTADSAWAMALLFALDRKER-RQAIVDAARENDVLIIDRYVASNAAY-SLARTQDPAIV 81

Query: 118 DSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + +++    +     PD  + L   V +   R + R +       D +E+ D  + E+  
Sbjct: 82  EWIEKTEFGDFQLPLPDVQVCLATSVGVAADRARKREASDVQRTRDAYEK-DSGLQERTL 140

Query: 175 QIFLDIAR 182
             +   A 
Sbjct: 141 AAYQKFAE 148


>gi|320450934|ref|YP_004203030.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Thermus
           scotoductus SA-01]
 gi|320151103|gb|ADW22481.1| deoxyguanosine kinase/deoxyadenosine kinase, subunit [Thermus
           scotoductus SA-01]
          Length = 202

 Score = 70.8 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 68/194 (35%), Gaps = 23/194 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG  GAGKTT   LL +    +     V   P  +         L       +  
Sbjct: 1   MYIAIEGPIGAGKTTLARLLAQRFGAEPLLEVVEENPFLS---------LFYQDRKRYAF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF---LDSLQ 121
           + +     +          RP L  G  ++ D +L    A     +     +   LD  +
Sbjct: 52  KTQVFFLLSRYRQLSRLRERP-LFGG--VVAD-YLFDKDAIFASLNLEGPEWDLYLDLYR 107

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E+S++   PD T+ L  PV + L+R++ R    E       E  D    E   + +    
Sbjct: 108 ELSLKLPPPDLTVYLRAPVLVLLERIRKRGRPFE-------EGMDPTYLEALSEAYERHF 160

Query: 182 RNQPDRCHIVDSAH 195
                   ++++  
Sbjct: 161 ARYAHPLLVLEADQ 174


>gi|16077083|ref|NP_387896.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221307824|ref|ZP_03589671.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312146|ref|ZP_03593951.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317079|ref|ZP_03598373.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321342|ref|ZP_03602636.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|586860|sp|P37530|DGK_BACSU RecName: Full=Deoxyguanosine kinase; Short=DGUO kinase; Short=dGK
 gi|467405|dbj|BAA05251.1| unknown [Bacillus subtilis]
 gi|2632282|emb|CAB11791.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 207

 Score = 70.8 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 28/223 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+  FI+ EG  GAGKTT  ++L +       +  V   P      +  +         
Sbjct: 1   MNTAPFIAIEGPIGAGKTTLATMLSQKFGFPMINEIVEDNPYLDKFYDNIKE-------- 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +  + E + F   R   +E+     L +G+ ++ D  +  +  +     +     L+  
Sbjct: 53  -WSFQLE-MFFLCHRYKQLEDTSDHFLKKGQPVIADYHIYKNVIF--AERTLSPHQLEKY 108

Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175
           ++I          P+  I +   +   L R++ R    E      Y E+         +Q
Sbjct: 109 KKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEVAIKQ 168

Query: 176 IFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212
               +    P+     VD   S   V        I   V EL+
Sbjct: 169 ----LQEADPELTVLTVDGD-SKDFVLNKSDFERIAAHVKELI 206


>gi|311896881|dbj|BAJ29289.1| hypothetical protein KSE_34820 [Kitasatospora setae KM-6054]
          Length = 210

 Score = 70.4 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 75/220 (34%), Gaps = 31/220 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG+   GKTT  + L   L   +  V +      +P              + F AE + 
Sbjct: 5   IEGVSCVGKTTLAAQLAPHL---DRPVVIPCYYHASPDPTRL------PAPEPFTAEHQL 55

Query: 69  --IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISV 125
             I       D    +   AL EG+ ++ DR +D+  A+       +        + +  
Sbjct: 56  ANIAEFLDVEDLRLTLAGQALAEGRDVILDRTVDTLLAHAHAVGRMNGFDCDAQARHLVT 115

Query: 126 QEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD--IA 181
                MPD TI+L    D+  +R + R  +       +++R            +L   +A
Sbjct: 116 GRPVAMPDLTIVLTADPDVLARRARLRKGMPTI----FYDRHFSEHFN----AYLAHPLA 167

Query: 182 RNQPDRCHIVDSA-HSFQSVATNILNIV--WELVQKRVSP 218
                   ++D+   S   +    L  V   +  Q R SP
Sbjct: 168 PA----VALLDATDGSLDDLTAQALGHVHRHQAAQHRPSP 203


>gi|89100958|ref|ZP_01173804.1| deoxyguanosine kinase [Bacillus sp. NRRL B-14911]
 gi|89084329|gb|EAR63484.1| deoxyguanosine kinase [Bacillus sp. NRRL B-14911]
          Length = 215

 Score = 70.4 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +    Q       V   P      +           +E+  +
Sbjct: 6   FITVEGPIGVGKTSLAKAISEHFQFALLKEIVDENPFLGKFYDNI---------EEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   + ++    L   K ++ D  +  +  +     +           + +
Sbjct: 57  TE-MFFLCNRYKQLGDINTDYLANNKAVVADYHILKNLVF--AERTLSPAEFQKYVKIYD 113

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169
           I   +   P+  I L   ++  L+R++ R    E      Y E+  +  
Sbjct: 114 ILTSDMPRPNVIIYLHASLETLLQRIRLRGREIEKNISPLYLEQLSIDY 162


>gi|291409780|ref|XP_002721181.1| PREDICTED: UMP-CMP kinase 2-like [Oryctolagus cuniculus]
          Length = 451

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 79/237 (33%), Gaps = 58/237 (24%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P      +  R +      
Sbjct: 250 QRGKFQVIAIEGLDATGKTTVTQAVSDALKA----VLLKSPPSC--IGQW-RKIFDDEPT 302

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               A      +  A     E+V  P       ++ DR+  S+ AY    + S    L  
Sbjct: 303 IVRRAFYSLGNYIVASEIAKESVKSP-------VIVDRYWHSTAAYAIATEVSGG--LQQ 353

Query: 120 L---QEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESAC 158
           L        Q          D           +  +  ++R+Q R   +       E   
Sbjct: 354 LPPAHHPVYQWPE-------DLLKPDLVLLLTVSPEERVRRLQGRGVEKTQEEAELEGNS 406

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +           +K ++ +  +    P  CH+VD++ S + V   +L+++    ++R
Sbjct: 407 V---------FRQKVQECYRRM--ENPG-CHVVDASPSREMVLQTVLSLIRNSGERR 451


>gi|221120456|ref|XP_002156620.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 346

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 52/133 (39%), Gaps = 17/133 (12%)

Query: 82  VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141
           +I+  +  G  L+ DR+  S  A+   +       +   +   +    PD    +++ ++
Sbjct: 14  LIKEKIANGVTLVVDRYAYSGVAFTSAKGYD----MLWCKNCDIGLPRPDAVYYMNIDIE 69

Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201
                     S+R     + +E  D    +K ++ F ++   +P   +++D+  S   + 
Sbjct: 70  DA--------SVRGDYGCERYEVSD--FQKKVQECFQNL--KEPS-WNVIDARESIDCIH 116

Query: 202 TNILNIVWELVQK 214
             +   V + + +
Sbjct: 117 KTLCESVLKTIGE 129


>gi|312221622|emb|CBY01562.1| hypothetical protein [Leptosphaeria maculans]
          Length = 97

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 11/98 (11%)

Query: 87  LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           L  GK ++ DR+  S   Y   + +   L L+  +   V    PD  + LD+  +   KR
Sbjct: 4   LRAGKTVIVDRYYYSGCVYSAAKQN-PSLSLEWSRHPEVGLPRPDLCVFLDISAEEAAKR 62

Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                        + +E+K   + ++ R++F  +   +
Sbjct: 63  --------GGYGSEKYEKK--EMQDRVRELFEMMMSRE 90


>gi|313112783|ref|ZP_07798430.1| hypothetical protein HMPREF9436_00270 [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624853|gb|EFQ08161.1| hypothetical protein HMPREF9436_00270 [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 224

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 84/238 (35%), Gaps = 45/238 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAARHVL 54
           M   + ISF G++G+GK+T I      L+++ Y V + R         G    +  + +L
Sbjct: 1   MKPAM-ISFMGLDGSGKSTSIDYAYEQLKKRGYKVEIVRAAYVIVFLRG--VIKLGKKIL 57

Query: 55  LSCGVDEFGAEAEAIVFA---------AARLDHVENVIRPALME----------GKILLC 95
           +    D F  + +A + +         A ++      I   L            G  LL 
Sbjct: 58  MKKDSDPFSGDYKAYLESLRKNANKGGAYKIFSFLTTIEFKLQIFFKIRLKRFFGTTLLV 117

Query: 96  DRFLDSSYA-YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           DR++  +   Y    D  +    +++         PD  I +  PV++   R        
Sbjct: 118 DRYIYDNVVTYAANLDLGEEYMEETMNGKWKNAPRPDKIIYIKTPVEVCCSRK------D 171

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +     Y E +    +EK  +++            ++      Q +   ++  + E++
Sbjct: 172 DIPDPLYLEIRKPR-YEKVAEMY---------NATVIAGDQDKQKMLDEVMAAIDEVL 219


>gi|296332944|ref|ZP_06875402.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672713|ref|YP_003864384.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149908|gb|EFG90799.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305410956|gb|ADM36074.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 207

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 28/223 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+  FI+ EG  GAGKTT  ++L +          V   P      +           +
Sbjct: 1   MNTAPFIAIEGPIGAGKTTLATMLSQEFGFPMISEIVEDNPYLDKFYDNI---------E 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E+  + E + F   R   +E+     L +G+ ++ D  +  +  +     +     L+  
Sbjct: 52  EWSFQLE-MFFLCHRYKQLEDTSDHFLKKGQPVIADYHIYKNVIF--AERTLSQHQLEKY 108

Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175
           ++I          P+  I +   +   L R++ R    E      Y E+         +Q
Sbjct: 109 KKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLIADYEVAIKQ 168

Query: 176 IFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212
               +    P+     +D   S   V        I   V EL+
Sbjct: 169 ----LQEADPELTVLTIDGD-SKDFVLNKSDFERIAAHVKELI 206


>gi|321313683|ref|YP_004205970.1| deoxyguanosine kinase [Bacillus subtilis BSn5]
 gi|291482385|dbj|BAI83460.1| deoxyguanosine kinase [Bacillus subtilis subsp. natto BEST195]
 gi|320019957|gb|ADV94943.1| deoxyguanosine kinase [Bacillus subtilis BSn5]
          Length = 207

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 77/223 (34%), Gaps = 28/223 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+  FI+ EG  GAGKTT  ++L +       +  V   P      +           +
Sbjct: 1   MNTAPFIAIEGPIGAGKTTLATMLSQEFGFPMINEIVEDNPYLDKFYDNI---------E 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E+  + E + F   R   +E+     L +G+ ++ D  +  +  +     +     L+  
Sbjct: 52  EWSFQLE-MFFLCHRYKQLEDTSDHFLKKGQPVIADYHIYKNVIF--AERTLSPHQLEKY 108

Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175
           ++I          P+  I +   +   L R++ R    E      Y E+         +Q
Sbjct: 109 KKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEVAIKQ 168

Query: 176 IFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212
               +    P+     VD   S   V        I   V EL+
Sbjct: 169 ----LQEADPELTVLTVDGD-SKDFVLNKSDFERIAAHVKELI 206


>gi|226942414|ref|YP_002797487.1| Thymidylate kinase [Azotobacter vinelandii DJ]
 gi|226717341|gb|ACO76512.1| Thymidylate kinase [Azotobacter vinelandii DJ]
          Length = 189

 Score = 70.1 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 56/149 (37%), Gaps = 15/149 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI  E ++G GKTT    L   L            PG  PA +  R  + +   D   A
Sbjct: 3   RFIVIESLDGVGKTTLTRNLAAALGG-----IAMSMPG--PAIKPLREPIQAALGDARIA 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A   +F  A         R A   G+ ++ DRFL S+ AY   R             + 
Sbjct: 56  HA---LFYLAVAAAEGTRARAATDAGRSVVMDRFLASTIAYARARGVDADFD-----ALL 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
                PD +++L L  D  ++R+  R  +
Sbjct: 108 PALPRPDVSVLLTLDEDERIRRLGARGEM 136


>gi|269962034|ref|ZP_06176388.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833118|gb|EEZ87223.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 80

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
          FI  EG+EGAGK+T I  +   L+     D+  TREPGGTP AE  R ++      ++  
Sbjct: 5  FIVVEGLEGAGKSTAIKTVLDTLKAAGIQDIVNTREPGGTPLAEKMRALVKEEHEGEDLK 64

Query: 64 AEAE 67
             E
Sbjct: 65 DMTE 68


>gi|156186999|gb|ABU55750.1| thymidylate kinase [Spiraea stunt phytoplasma]
          Length = 88

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I FEG++G+GKT+ I  L+  L+       + +  G +   +  R++ L+    +   
Sbjct: 2  KLIVFEGLDGSGKTSLIHALQPQLK---IPHQLYQGLGSSSIGKKIRNLFLN--FQQVDY 56

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +  +        +I P L   ++++ D
Sbjct: 57 LTRFYLSLSNMTQIQVELISPQLKNHQLIILD 88


>gi|294496889|ref|YP_003560589.1| deoxyguanosine kinase [Bacillus megaterium QM B1551]
 gi|294346826|gb|ADE67155.1| deoxyguanosine kinase [Bacillus megaterium QM B1551]
          Length = 211

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 80/218 (36%), Gaps = 22/218 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FIS EG  G GKT+    + +  Q +     V   P      +           +E+  +
Sbjct: 6   FISVEGPIGVGKTSLAKEIAQAFQFEILKEIVDENPFLGKFYKNI---------NEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSLQEI 123
            E + F   R   +E++ +  L   K ++ D  +  +   A Q  +D     ++     +
Sbjct: 57  TE-MFFLCNRYKQLEDIQKGFLSYKKPVVADYHIMKNMIFAEQTLKDEQYKKYVQIFHIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     P+  I L+  +D  LKR++ R    E     ++  +    +EK    F    +N
Sbjct: 116 TADMPAPNIIIYLNASLDTLLKRIKMRGREIERNIDPHYLARLSDDYEKAMTAFE---QN 172

Query: 184 QPD-RCHIVDSAHSFQSVA-----TNILNIVWELVQKR 215
            PD      D       V        IL+ V E + KR
Sbjct: 173 NPDVTILRYDGD-EIDFVQNKQHLNRILSEVQESMLKR 209


>gi|205371949|ref|ZP_03224768.1| deoxyguanosine kinase [Bacillus coahuilensis m4-4]
          Length = 213

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 12/153 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    L            V   P      +           +E+  +
Sbjct: 6   FITVEGPIGVGKTSLAKALSDHFHYHLLKEIVDENPFLDKFYDNI---------EEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEIS 124
            E + F   R   +E++    L + K ++ D  +  +  + Q    + Q+     + +I 
Sbjct: 57  TE-MFFLCNRFKQLEDIQNHYLSKDKPIVADYHIFKNLIFAQRTLKNQQYDKYMQIFDIL 115

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRES 156
            ++   P+  I L+  +D  L R++ R    E 
Sbjct: 116 TKDMPRPNLVIYLNASLDTLLTRIEMRGREFEK 148


>gi|313680444|ref|YP_004058183.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977]
 gi|313153159|gb|ADR37010.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977]
          Length = 199

 Score = 69.3 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 20/192 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG  G GKTT    L + L+ +     V   P      E             F  
Sbjct: 1   MYIAIEGPIGVGKTTLTRHLAQALEGEALFEVVEENPFLPLFYE-------DPEHYAFKV 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE- 122
           +   ++   +R   +E++ +P L E + ++ D   D  + +     +  +      L + 
Sbjct: 54  QVFFLL---SRYKQLEHLAQPRLFE-RAVVADYLFDKDFIFASLNLEGHEWELYQELYQS 109

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +S +   PD TI L  P+++ L+R++ R    E          D    E+  + +     
Sbjct: 110 LSPRIPTPDLTIYLRAPLEVLLERIRRRGRSFERGI-------DPGYLERLTEAYDRHFA 162

Query: 183 NQPDRCHIVDSA 194
               R  + D+ 
Sbjct: 163 RYRGRLWVFDNT 174


>gi|317128650|ref|YP_004094932.1| deoxynucleoside kinase [Bacillus cellulosilyticus DSM 2522]
 gi|315473598|gb|ADU30201.1| deoxynucleoside kinase [Bacillus cellulosilyticus DSM 2522]
          Length = 216

 Score = 69.3 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 13/169 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+  ++L  +   K     V   P  +   E            E+  +
Sbjct: 9   FIAVEGPIGVGKTSLATMLAHYFNYKLLKEIVDENPFLSKFYENI---------AEWSFQ 59

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEIS 124
            E + F   R   +E+     L  GK ++ D  +  +  +  +     H    D +  I 
Sbjct: 60  TE-MFFLCNRYKQLEDTYDNNLSRGKAVVSDYHIFKNLLFAKQTLKQDHFDKYDRIYRIL 118

Query: 125 VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171
             ++  P+  I L   +   L R++ R  L E A    Y ++     H+
Sbjct: 119 TNDLPRPNIIIHLHASLPTLLNRIEQRGRLMEQAIDPKYLQQLSDDYHQ 167


>gi|325066507|ref|ZP_08125180.1| thymidylate kinase [Actinomyces oris K20]
          Length = 63

 Score = 69.3 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 28/43 (65%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46
          GLFISFEG +G GKTT I +L   L   + D  +TREPGGT  
Sbjct: 21 GLFISFEGGDGVGKTTQIRILADLLTAADVDHILTREPGGTEL 63


>gi|213025801|ref|ZP_03340248.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 58

 Score = 69.3 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +D  E++      + R  +L++A     R   +D+     +V  +I   V + VQ++ +
Sbjct: 1   MDRIEQESFDFFNRTRARYLELAAQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 58


>gi|281340989|gb|EFB16573.1| hypothetical protein PANDA_012286 [Ailuropoda melanoleuca]
          Length = 138

 Score = 69.3 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 16/147 (10%)

Query: 44  TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
           T   +     L      E    +  ++F+A R + V  +I+  L +G  L+ DR+  S  
Sbjct: 8   TEIGKLLSSYL--EKKSEVEDHSVHLLFSANRWEQVP-LIKKKLSQGITLVVDRYAFSGV 64

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           A+   +   ++  LD  ++  V    PD  + L L +    +R             + +E
Sbjct: 65  AFTSAK---ENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAARR--------GEFGRERYE 113

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHI 190
             +    E+    F  +  ++     +
Sbjct: 114 NGN--FQERALHRFHQLMADETLNWKV 138


>gi|291296955|ref|YP_003508353.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279]
 gi|290471914|gb|ADD29333.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279]
          Length = 206

 Score = 69.3 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 18/211 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG+ G GKTT   LL   L  ++    V   P            L       +G 
Sbjct: 1   MYIAIEGVIGVGKTTLARLLAERLGAESLLEVVEENPFLP---------LFYQDPVRYGF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122
           + +   F  +R   +  + +P+L  G  ++ D   D    +     S     L  D  + 
Sbjct: 52  KVQVF-FLLSRYKQLLPLAQPSLFTGG-VVADYLFDKDAIFAAMNLSGAEWDLYNDLYRS 109

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LD 179
           ++ +   PD TI L  P+ + L+R++ R  + E      +  +    +E     +   L 
Sbjct: 110 LAPKIPTPDLTIYLRAPLPVILERIRRRGRVFEKQMEPEYLARLHEFYEHHFATYPHALW 169

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               Q      +++      V   +   + +
Sbjct: 170 TLETQDLNFAELEADQ--DWVVRQVQERLAQ 198


>gi|149182702|ref|ZP_01861169.1| Deoxyguanosine kinase [Bacillus sp. SG-1]
 gi|148849612|gb|EDL63795.1| Deoxyguanosine kinase [Bacillus sp. SG-1]
          Length = 213

 Score = 69.3 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 17/175 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +            V   P      +           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKAISDHFNYHLLKEIVDENPFLDKFYDNI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   +E++    + + K ++ D  +  +  +     + ++   D   ++ +
Sbjct: 57  TE-MFFLCNRYKQLEDIETHFISQNKPVVADYHILKNLIF--AERTLKNKQFDKYLNIYQ 113

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175
           I  ++  +P+  I L+  +D  L+R+  R    E      Y E+  +      +Q
Sbjct: 114 ILTEDMPVPNVIIYLNASLDTLLQRIAMRGREFEKKISPLYLEQLSMDYERHMQQ 168


>gi|254427963|ref|ZP_05041670.1| Deoxynucleoside kinase subfamily, putative [Alcanivorax sp. DG881]
 gi|196194132|gb|EDX89091.1| Deoxynucleoside kinase subfamily, putative [Alcanivorax sp. DG881]
          Length = 230

 Score = 68.9 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 79/225 (35%), Gaps = 42/225 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLK------RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            FI+ EG  GAGKT+    L       + L+R + +  +TR                   
Sbjct: 21  RFIAVEGPIGAGKTSLAKRLAMTFGYDQLLERADDNPFLTRFY---------------QD 65

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFL 117
              +  + E + F   R D +  V +  L  G   + D  +D +  + Q   D  +    
Sbjct: 66  PARYALQTE-LFFLFQRADQLRQVQQQDLFAGPR-IADFLIDKNRLFAQVTLDEDEFELY 123

Query: 118 DSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEK 172
            ++ + ++V    PD  I L  P  +  +R+ +R +  E       LD            
Sbjct: 124 RNVDDHLTVDAPRPDLVIYLQAPPQVLRQRIGHRGNDFEQGIASDYLDKLSNAYTEFFH- 182

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVA--TNILNIVWELVQKR 215
               F D A        IV++A     V    +   ++ EL+  R
Sbjct: 183 ----FYDRAPL-----LIVNAA-EIDLVNHDRDYQQLISELLDIR 217


>gi|289209205|ref|YP_003461271.1| deoxynucleoside kinase [Thioalkalivibrio sp. K90mix]
 gi|288944836|gb|ADC72535.1| deoxynucleoside kinase [Thioalkalivibrio sp. K90mix]
          Length = 216

 Score = 68.9 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 19/172 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EG  G GK++   LL   L+ +         P   P  E            +  A 
Sbjct: 8   FVAVEGPIGVGKSSLARLLSEHLRAEGI----FEAPDENPFLERFYQ------EPDKHAL 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           A  + F   R+  +  V +  L E + +   + D   D  +A          ++ +  + 
Sbjct: 58  ATQLHFLVQRVRQLTPVSQKGLFEQRHVADYVMD--KDPLFAELNLHPDELEIYREMFRH 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR----YSLRESACLDYFERKDVMIH 170
           +      PD  I L  PV++ L R++ R        E+  L+          
Sbjct: 116 LRAGLPRPDLVIYLQAPVEVLLDRIRQRARPYERHIEAHYLERLNAAYAEFF 167


>gi|281212513|gb|EFA86673.1| deoxyguanosine kinase [Polysphondylium pallidum PN500]
          Length = 279

 Score = 68.9 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 29/230 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +   I  EG   AGKT   + L   L  K +    T  P      E  +   L   +  
Sbjct: 23  KNAKIIILEGNISAGKTFLSTRLGELLNYKVFLEPTTTNPYLQSFYENPKKYALDMQLWL 82

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL- 120
                +  + A          +  +L+    ++ DR + S + +         +  D   
Sbjct: 83  LNQRFKTYLLA----------LEYSLVNDSGVVLDRSVFSDWVFAENCRKEGLISSDGFT 132

Query: 121 ------QEISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDYFERKDVMIHEK 172
                  ++  Q  +P+ T+ LD+  +  L R+Q   +    +S  L Y +  D      
Sbjct: 133 QYTTIRNKMISQIPIPNITVYLDVTPEQCLNRIQTLRKREFEQSIPLSYLQGLDGCY--- 189

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             + FL+  +++      VD +         I  I+ E+   R  PLS K
Sbjct: 190 --KSFLEEIKSKGSNVVTVDWSK-----FAEIDTIIKEIKNDRSLPLSEK 232


>gi|307297649|ref|ZP_07577455.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916909|gb|EFN47291.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 205

 Score = 68.5 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 33/223 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG +IS EG+ G GKTT + LL +          V   P      E           + +
Sbjct: 7   SGKYISVEGVIGVGKTTLVKLLSQKYTMPVVLEVVEENPFLAHFYEDI---------ERW 57

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLD 118
             + + + F  +R D   NV + A  +G+ ++ D      YA+         + +   L 
Sbjct: 58  AFQTQ-LFFLISRFDQQSNV-KKAASQGQGVISD------YAFMKDHLFASLTLKGEQLK 109

Query: 119 SLQEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             ++I      Q + PD  I L   +D  +KR+  R    E       +R  + +     
Sbjct: 110 LYEKIFSVLKDQVLYPDLIIYLYADIDTLMKRIALRDRPFER----RMDRTYIAMLSDTY 165

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVAT-NILNIVWELVQKRV 216
           + +  +A     R   +D++ S   V   + LN+V+  ++  +
Sbjct: 166 EKY--MAAFSESRVLRIDTS-SIDFVRNVDDLNMVFSRIEANL 205


>gi|302531819|ref|ZP_07284161.1| hypothetical protein SSMG_08201 [Streptomyces sp. AA4]
 gi|302440714|gb|EFL12530.1| hypothetical protein SSMG_08201 [Streptomyces sp. AA4]
          Length = 250

 Score = 68.5 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 74/236 (31%), Gaps = 38/236 (16%)

Query: 3   SGLFISFEGI--------EGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
            G+ I+ EGI                 + L   L    +   V          E    +L
Sbjct: 19  RGVLITVEGIWGTGKTTT--------ATALGERLTAAGFSTRVMHYGPRHGVVERLSDML 70

Query: 55  ----------LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
                     L        A  + ++       +   + RP L E  +++ D  + S  A
Sbjct: 71  DTAPLRRRDGLGGYAAAHHATVDVLLRLCRESYNHRVLYRPVLAEHDVVVIDHGVYSKLA 130

Query: 105 YQGER------DSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           Y          D    L L+ ++ ++    + PD  + LD+P  +  +R   R     S 
Sbjct: 131 YALAVLCEQHPDLDPMLLLEQVRAVAAPWFLHPDVALWLDMPWPLARERAIARGRGGGSP 190

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWELV 212
                  + ++   +    +  +A   PDR   +     +  SV   I  ++  ++
Sbjct: 191 GS----VERLLFLPRYSHAYRLLANALPDRIRRIRVGTRTTPSVLAEIDELLSPVL 242


>gi|293376814|ref|ZP_06623034.1| deoxynucleoside kinase [Turicibacter sanguinis PC909]
 gi|325845378|ref|ZP_08168677.1| deoxyguanosine kinase [Turicibacter sp. HGF1]
 gi|292644566|gb|EFF62656.1| deoxynucleoside kinase [Turicibacter sanguinis PC909]
 gi|325488593|gb|EGC91003.1| deoxyguanosine kinase [Turicibacter sp. HGF1]
          Length = 211

 Score = 68.5 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 79/227 (34%), Gaps = 34/227 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N   FI+ EG  G GKT+  +LL +          V   P      +           D 
Sbjct: 3   NKPYFIAIEGPIGIGKTSLATLLSKHYNYHLLKEIVYENPFLDKFYDDI---------DS 53

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  + E + F   R   + ++ +  L   K ++ D  L  +  +     S   L +++  
Sbjct: 54  WAFQTE-MFFLTNRYKQLTDIQKDFLDNQKSVVSDYHLFKNVIF-----SKMTLDVNNFN 107

Query: 122 E-------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173
           +       +      P+  II++  ++  +KR++ R    E     +Y +      HE  
Sbjct: 108 KYQKIYHILEEDLPKPNVIIIVNATLETIMKRIKMRNRHFEQNIDPNYLQTLIDSYHE-- 165

Query: 174 RQIFLDIARNQPDRCHIVDSAHS-FQSV-----ATNILNIVWELVQK 214
              +  + +   +   +++        V        ++  + E++ +
Sbjct: 166 ---YTALLKENHEEIKVIELNGDELDYVNNPKHLQQVIKKIDEMIGQ 209


>gi|225719270|gb|ACO15481.1| Deoxynucleoside kinase [Caligus clemensi]
          Length = 287

 Score = 68.5 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 84/236 (35%), Gaps = 40/236 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGV 59
           N    I+ EGI G GK+T +S +K +      DV    EP           +L  +    
Sbjct: 61  NRPFVINVEGIVGTGKSTFLSYMKEY---PYMDVLP--EPVNQWTNLNGTDLLGLVFENP 115

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDS----- 111
             +    E+ V      +H+    RP    G I + +R   S+   +A Q          
Sbjct: 116 ARWSMTQESYVLLTLTQEHL----RPY---GIIKIMERSPHSAQNVFARQFHEAGQMTEV 168

Query: 112 ---SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER--- 164
                  + D L +    ++  D TI L L  ++  KRV  R    E    LD+ +R   
Sbjct: 169 EFNVLQAWYDFLND--KMDLRSDLTIYLRLDPEVAYKRVLERGRSEEKKLSLDFLQRLHR 226

Query: 165 --KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
              D ++H      FL       D   ++D++   +     I   + + + K +  
Sbjct: 227 FHDDWLMHRNT-TSFL-----PSDNILVLDTSRPLEE-MERIYKHLGKWIWKSIPK 275


>gi|156186981|gb|ABU55736.1| thymidylate kinase [Malaysian periwinkle yellows phytoplasma]
          Length = 99

 Score = 68.1 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I FEG++G+GKT+ I+ L+  L+       + +  G +   +  R + L+    +   
Sbjct: 13 KLIVFEGLDGSGKTSLINSLQPHLKN---PYQLYQGLGSSSLGKEIRGLFLN--FQQVDY 67

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +  A        +I   L   ++++ D
Sbjct: 68 LTRFYLSLANMAQIQAELIVSQLKNNQLIILD 99


>gi|158317246|ref|YP_001509754.1| thymidylate kinase-like protein [Frankia sp. EAN1pec]
 gi|158112651|gb|ABW14848.1| Thymidylate kinase-like protein [Frankia sp. EAN1pec]
          Length = 226

 Score = 68.1 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 21/210 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           L ++ EG++GAGKTT I  L+  L+  R      V  E     A       +L   V   
Sbjct: 7   LLVAVEGVDGAGKTTLIRGLETVLRPLRGTRPARVCVEIF--RAIAEPDDTVLHQAVIPG 64

Query: 63  GAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A +   +A          RP L      L DR++ SS  + G        +L+ +
Sbjct: 65  PVRRLAHLIELSAQLRYRTGPDGRPDL------LFDRWIQSSEVHCGPYGEQHRPWLEHM 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH-EKRRQIFLD 179
           +++      PD  + L +P  +  +R+  R   R  A    F    +  H  ++   +  
Sbjct: 119 EDL---LPRPDPLLWLRVPPALAYERMVARGDRRTRA----FTPAALRAHLVEQADGYEK 171

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           I     D    +D   S + +     + + 
Sbjct: 172 IMAQA-DNVVELDGTQSRERLLDQAASAIE 200


>gi|295402715|ref|ZP_06812657.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294975246|gb|EFG50882.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 211

 Score = 68.1 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 4   GL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G+  FI+ EG  G GKT+    +            V   P      E           +E
Sbjct: 2   GMVPFIAIEGPIGVGKTSLAKAISEHFHYHLVKEIVDENPFLGKFYENI---------EE 52

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH---LFLD 118
           +  + E + F   R   +E + R  L   + ++ D  +  +  +   + + +        
Sbjct: 53  WSFQTE-MFFLCHRYKQLEEIDRDFLQRQQPVVTDYHIMKNLIF--AKRTLKIHHYKKYT 109

Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            + +I    +  P+  I L   ++  L R+Q R    E  
Sbjct: 110 KIYDILTDGLPQPNMIIYLHASLETLLTRIQQRGRDFEKR 149


>gi|312109166|ref|YP_003987482.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1]
 gi|311214267|gb|ADP72871.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1]
          Length = 211

 Score = 68.1 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%)

Query: 4   GL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G+  FI+ EG  G GKT+    +            V   P      E           +E
Sbjct: 2   GMVPFIAIEGPIGVGKTSLAKAISEHFHYHLVKEIVDENPFLGKFYENI---------EE 52

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH---LFLD 118
           +  + E + F   R   +E + R  L   + ++ D  +  +  +   + + +        
Sbjct: 53  WSFQTE-MFFLCHRYKQLEEIDRDFLQRQQPVVTDYHIMKNLIF--AKRTLKIHHYKKYT 109

Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            + +I    +  P+  I L   ++  L R+Q R    E  
Sbjct: 110 KIYDILTDGLPQPNMIIYLHASLETLLTRIQQRGRDFEKR 149


>gi|301771640|ref|XP_002921240.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Ailuropoda
           melanoleuca]
          Length = 265

 Score = 68.1 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 40/222 (18%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P                  
Sbjct: 66  QKGKFPVIAIEGLDATGKTTVTQSVSDSLKA----VLLKSPPACISQWRKI--------F 113

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLD 118
           D+         ++         + + +      ++ DR+  S+  Y    + +     L 
Sbjct: 114 DDEPTIIRRAFYSLGNYIVASEIAKESSKSP--VIVDRYWHSTATYAIATEVTGGLQHLP 171

Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  Q          D           +  +  + R++ R   R     +  E   V
Sbjct: 172 PAHHPIYQWPR-------DLLKPDLVLLLTVSPEERMHRIEGRGMERTREEAE-LEANSV 223

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
              +K    +  +    P  CH+VD++ S + V   +L+++ 
Sbjct: 224 -FRQKVEVSYQRM--ENPG-CHVVDASPSREKVLQMVLSVIQ 261


>gi|189210088|ref|XP_001941376.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187977469|gb|EDU44095.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 136

 Score = 67.7 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 12/100 (12%)

Query: 96  DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           DR+  S   Y   + +     L+  +   +    PD  I LD+  +   KR         
Sbjct: 42  DRYYYSGCVYSAAKQNPNMS-LEWCRNPELGLPRPDLCIFLDISAEDAAKR--------G 92

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCHIVDSA 194
               + +E+KD+   ++ R +F  + +  + +    +D+ 
Sbjct: 93  GYGAEKYEKKDM--QDRVRVLFETLMQRKEGEDFVRIDAG 130


>gi|155371404|ref|YP_001426938.1| hypothetical protein ATCV1_Z457L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124724|gb|ABT16591.1| hypothetical protein ATCV1_Z457L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 188

 Score = 67.7 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 72/208 (34%), Gaps = 23/208 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS EG+ G GK+T ++ LK     + + V    EP         +             + 
Sbjct: 4   ISIEGLMGTGKSTVLAALKE----RGFKVVT--EPVEKWT--FLQKFYDDPRKYSLALQI 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           + ++  A             +     +   R++ ++        + +   + S     ++
Sbjct: 56  QILLTFA--EQEFPEDEVVFVERSPAV--SRYVFANMLRSEGLMTDEAKNVYSQLYTKLE 111

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
              PD  I LD PVD  LKR ++R             R+ +   EK   IF         
Sbjct: 112 LWKPDGYIFLDAPVDTCLKRQESRGDSYN------ITRQYMTNLEKYYNIFFKYNTRD-- 163

Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214
              IVDS    + V  ++L  V  + +K
Sbjct: 164 ---IVDSNRPVEDVVADVLLAVERMKKK 188


>gi|258650987|ref|YP_003200143.1| major facilitator superfamily protein [Nakamurella multipartita DSM
           44233]
 gi|258554212|gb|ACV77154.1| major facilitator superfamily MFS_1 [Nakamurella multipartita DSM
           44233]
          Length = 725

 Score = 67.7 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 17/136 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGV 59
           ++G  I+ EG + A    ++  +++ LQ   Y   V   REP  T  + A          
Sbjct: 469 HAGALIAVEGTDAAATADYLKSIEQHLQETGYLTCVVSRREPSPTVRSAAV--------- 519

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLD 118
                 A+A+  +A   + +   + PAL +G ++LCD F+D     Y+        L   
Sbjct: 520 ---DPLADALRTSATLAELMATQVGPALEDGAVVLCDGFMDEFIVRYRTLGLVEDDLSRV 576

Query: 119 SLQEISVQEVMPDCTI 134
           ++   ++  + PD T+
Sbjct: 577 AV--WAISGLKPDLTV 590


>gi|39939030|ref|NP_950796.1| hypothetical protein PAM_544 [Onion yellows phytoplasma OY-M]
 gi|39722139|dbj|BAD04629.1| hypothetical protein [Onion yellows phytoplasma OY-M]
          Length = 126

 Score = 67.7 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 9/119 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I FEG  G GKT+ I+ L+  L+       + +  G +   +  R + L+    +   
Sbjct: 3   KLIVFEGHSGRGKTSLINSLRPHLKN---PYQLYQGLGSSSLGKEIRGLFLN--FQQVDY 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                +  A        + +      ++++ DR+L S+YAYQ      +   L  L++I
Sbjct: 58  LTRFYLSLANMSQIQAELFK----NHQLIILDRWLPSTYAYQLFPFFKEKKQLLPLKKI 112


>gi|152973868|ref|YP_001373385.1| deoxynucleoside kinase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022620|gb|ABS20390.1| deoxynucleoside kinase [Bacillus cytotoxicus NVH 391-98]
          Length = 211

 Score = 67.7 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           +E+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------EEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++ +  L + K ++ D  +  +  +     +D     +L   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINKKYLNQHKPVVADYHIFKNLIFASRTLKDVQYEKYLRIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|297607687|ref|NP_001060418.2| Os07g0639900 [Oryza sativa Japonica Group]
 gi|255678005|dbj|BAF22332.2| Os07g0639900 [Oryza sativa Japonica Group]
          Length = 131

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61
            G  I  EG++ +GK++  + L  FLQ K       R P  GT   +     L      E
Sbjct: 50  RGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYL--ANESE 107

Query: 62  FGAEAEAIVFAAARLD 77
                  ++F+A R +
Sbjct: 108 LDDRTIHLLFSANRWE 123


>gi|166796829|gb|AAI59429.1| Dtymk protein [Rattus norvegicus]
          Length = 124

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I  EG++ AGKTT    L   L    +   + R P  +          L    + 
Sbjct: 4  RRGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTE- 62

Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEG 90
              +  ++F+A R + V  +I+  L +G
Sbjct: 63 LEDHSVHLLFSANRWEQVP-LIKAKLNQG 90


>gi|242241896|ref|ZP_04796341.1| possible deoxyadenosine kinase [Staphylococcus epidermidis W23144]
 gi|251809980|ref|ZP_04824453.1| possible deoxyadenosine kinase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|242234674|gb|EES36986.1| possible deoxyadenosine kinase [Staphylococcus epidermidis W23144]
 gi|251806523|gb|EES59180.1| possible deoxyadenosine kinase [Staphylococcus epidermidis
           BCM-HMP0060]
          Length = 232

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 85/221 (38%), Gaps = 27/221 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L +          V   P  +   +           +
Sbjct: 28  MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 77

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++   +L +G  ++ D  +  +  +     D+ +      
Sbjct: 78  KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 132

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +D+   R+  R    ES      E   ++  +K    + 
Sbjct: 133 IFDILTEDIEMPNTIIFLDADLDVLKSRIAQRNRSFESQ----IEDDYLLTLKKDYLAYY 188

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214
           +  +N       +D++     V  +     ILN+V  ++ +
Sbjct: 189 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 228


>gi|110639273|ref|YP_679482.1| thymidylate kinase [Cytophaga hutchinsonii ATCC 33406]
 gi|110281954|gb|ABG60140.1| conserved hypothetical protein; possible thymidylate kinase
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 896

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 54/165 (32%), Gaps = 25/165 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN G+ I+  G++GAGK+T I  LK    Q+    V V R     P+             
Sbjct: 683 MNKGVIITVSGVDGAGKSTIIEDLKSSFVQKFRKKVVVLR---HRPSIFPILSAWKHGKK 739

Query: 60  DEFGAEAEAI---------VFAAARLDHVEN--------VIRPALMEGKILLCDRFLDSS 102
                 AE +         + +  R  +           V    ++ G I++ DR+    
Sbjct: 740 KAEAMAAERLPRQGTNDSKLSSLFRFGYYYTDYLFGQVYVYVKYVLRGYIVIYDRYYFDF 799

Query: 103 YAYQ-GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
                          +  L +       P   I+L    ++ LKR
Sbjct: 800 IGDSKRSNLKLNAKVVTWLYKFIY---KPKLNILLYASPEVILKR 841


>gi|239825600|ref|YP_002948224.1| deoxynucleoside kinase [Geobacillus sp. WCH70]
 gi|239805893|gb|ACS22958.1| deoxynucleoside kinase [Geobacillus sp. WCH70]
          Length = 212

 Score = 67.4 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%)

Query: 4   GL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G+  FI+ EG  G GKT+    +    +       V   P      E           +E
Sbjct: 2   GMVPFIAVEGPIGVGKTSLAKAISEHFRYHLVKEIVDENPFLGKFYENI---------EE 52

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118
           +  + E + F   R   +E + R  L + K ++ D  +  +  +   + + +        
Sbjct: 53  WSFQTE-MFFLCHRYKQLEEIDRNFLQQKKPVVADYHIMKNVIF--AKRTLKEHHYKKYI 109

Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            + +I    +  P+  I L   ++  L R+  R    E  
Sbjct: 110 KIYDILTDGLPQPNMIIYLHASLETLLTRIHQRGRDFEKR 149


>gi|125775535|ref|XP_001358975.1| GA19526 [Drosophila pseudoobscura pseudoobscura]
 gi|54638716|gb|EAL28118.1| GA19526 [Drosophila pseudoobscura pseudoobscura]
          Length = 408

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 32/228 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------------VTREPGGTPAAEAA 50
           I  EG   +GKT     L   L  + Y                   +  E   +  +   
Sbjct: 86  ICVEGPIASGKTKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPELPPSCRSYDI 145

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
           R+  L    D   A+ +  ++   R     + ++     G+ ++ +R   S + +     
Sbjct: 146 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHIFSTGQGVVLERSPYSDFVFMETMF 203

Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            QG          + +++ ++ E+  P   I LDLPVD   KR++ R    E     + E
Sbjct: 204 RQGYLSRGARSVYNEIRQNTIGELLKPHLVIYLDLPVDAVQKRIKARNVEHEVKSKVFSE 263

Query: 164 R--KDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
              +D+ I  K  Q +L    N  +   I D  +    + V  +I  I
Sbjct: 264 AYLRDMEILYK--QQYLKDIANHAE-LLIYDWTADGETEVVVEDIERI 308


>gi|94984210|ref|YP_603574.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300]
 gi|94554491|gb|ABF44405.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300]
          Length = 205

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 68/200 (34%), Gaps = 34/200 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG  G GKT+    L        N +V     P      EA              
Sbjct: 1   MYLVVEGPIGVGKTSLAGRLAARYGAALNLEVVE-ENPFLARFYEA-------------- 45

Query: 64  AEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLF 116
            E  A      F  +R   +  + +P L  G  ++ D +L   D  +A    +D+   L+
Sbjct: 46  PETYAFQVQVFFLLSRFKQLSKLAQPGLWSGN-VVSD-YLFDKDFIFAAMNLKDAEFALY 103

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQ 175
            D    +S +   PD  I L    ++ L R++ R           FER        +   
Sbjct: 104 EDLYAHLSPRLPTPDLVIYLRAEPELLLARIEQRGRP--------FERAMQADYLRELTA 155

Query: 176 IFLDIARNQPDRCHIVDSAH 195
            +    R  P     VD++H
Sbjct: 156 RYDAYFRTYPGHVLTVDASH 175


>gi|195144468|ref|XP_002013218.1| GL24009 [Drosophila persimilis]
 gi|194102161|gb|EDW24204.1| GL24009 [Drosophila persimilis]
          Length = 408

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 32/228 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------------VTREPGGTPAAEAA 50
           I  EG   +GKT     L   L  + Y                   +  E   +  +   
Sbjct: 86  ICVEGPIASGKTKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPELPPSCRSYDI 145

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
           R+  L    D   A+ +  ++   R     + ++     G+ ++ +R   S + +     
Sbjct: 146 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHIFSTGQGVVLERSPYSDFVFMETMF 203

Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            QG          + +++ ++ E+  P   I LDLPVD   KR++ R    E     + E
Sbjct: 204 RQGYLSRGARSVYNEIRQNTIGELLKPHLVIYLDLPVDAVQKRIKARNVEHEVKSTVFSE 263

Query: 164 R--KDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
              +D+ I  K  Q +L    N  +   I D  +    + V  +I  I
Sbjct: 264 AYLRDMEILYK--QQYLKDIANHAE-LLIYDWTADGETEVVVEDIERI 308


>gi|119478380|ref|ZP_01618388.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143]
 gi|119448589|gb|EAW29835.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143]
          Length = 226

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 67/183 (36%), Gaps = 40/183 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EG  G GKTT    L      +     +       P  E            +  A
Sbjct: 19  RFIAIEGAIGVGKTTLARQLADTFNYQ----TLLENAEQNPFLERFYQ------NQKHAA 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI---L-LCDRFL---DSSYAYQGERDSSQHLFL 117
            A  + F   R   +E+     L +G I   + + D FL   D  +A Q   D+ +    
Sbjct: 69  LATQLFFLFQRSQQIED-----LRQGDIFEPVRVSD-FLIDKDKLFA-QLNLDADEFQLY 121

Query: 118 DSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           D + Q++++    PD  I L   VD+ L R+QNR                V   ++  + 
Sbjct: 122 DKVFQQLTIDAPKPDLVIYLQASVDVLLARIQNR---------------GVEFEQRISRN 166

Query: 177 FLD 179
           +L+
Sbjct: 167 YLE 169


>gi|300717314|ref|YP_003742117.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299063150|emb|CAX60270.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 205

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 58/181 (32%), Gaps = 25/181 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59
           MN  LF+S +G +G GKTT +  + + L+  N  V  +  +       E    V      
Sbjct: 1   MNRPLFVSLDGPKGVGKTTLLEAVTQVLRADNKKVIRLCEKKSDPWRKETMALVNRFARD 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                E E     A     +   +      G I+L DR+  S  A+   R       +  
Sbjct: 61  PAMDLEREICQRFADSRAWISRHVLAKQPAGSIILMDRWYPSDAAF---RRMVPFAEILQ 117

Query: 120 LQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS----------LRESACLDYFER 164
           L  +      PD      T       +I   R   R                AC + FER
Sbjct: 118 LN-LERNVRTPDLHVGVAT-----APEISWARAAARTRGLSSTVIHKLDDHVACTEAFER 171

Query: 165 K 165
           +
Sbjct: 172 E 172


>gi|224475713|ref|YP_002633319.1| putative deoxynucleoside kinase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420320|emb|CAL27134.1| putative deoxynucleoside kinase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 205

 Score = 66.6 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 37/224 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   +I+ EG  G GK+T    L   LQ       V   P  +   E            
Sbjct: 1   MNQP-YIAIEGPIGVGKSTLAHYLSETLQYHEAQEIVDENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118
            +  + E + F   R   V+++ + +   G  ++ D  +  +  +A Q   D+    F  
Sbjct: 51  TWSFQTE-MFFLCNRYKQVQDLEQQS--SG--IVSDYHIFKNKIFARQTLTDTEFDKFSR 105

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
               ++   +MP+  I LD  +++  +R+  R    E    D             +Q + 
Sbjct: 106 IYNILTEDLMMPNVVIFLDADLEVLKQRIAKRNRSFEHQIED-------DYLLNLKQAYW 158

Query: 179 DI-----ARNQPDRCHIVDSAHSFQSV-----ATNILNIVWELV 212
           +      A+ +  +   +D+      V        ILNIV  ++
Sbjct: 159 EFYQSLKAQGKKAKW--IDTT-ELDFVNHPDDYAQILNIVQTMI 199


>gi|293367939|ref|ZP_06614577.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291317968|gb|EFE58376.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 232

 Score = 66.6 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 86/221 (38%), Gaps = 27/221 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L +          V   P  +   +           +
Sbjct: 28  MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 77

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++   +L +G  ++ D  +  +  +     D+ +      
Sbjct: 78  KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 132

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +++   R+  R    ES    + E   ++  +K    + 
Sbjct: 133 IFDILTEDIEMPNTIIFLDADLNVLKSRIAQRNRSFES----HIEDDYLLTLKKDYLAYY 188

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214
           +  +N       +D++     V  +     ILN+V  ++ +
Sbjct: 189 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 228


>gi|76664708|emb|CAJ17794.1| thymidylate kinase [Candidatus Phytoplasma solani]
          Length = 68

 Score = 66.6 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I FEG++G+GKT+ I  +KR L+ +  +V V R  G +   E+ R   L+   ++   
Sbjct: 2  KLIIFEGLDGSGKTSLIKSVKRELKEQGKEVIVIRGLGSSTIGESIRETFLT--HNKLHN 59

Query: 65 EAEAIV 70
               +
Sbjct: 60 LTRYFL 65


>gi|154331269|ref|XP_001561453.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134058770|emb|CAM36440.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 272

 Score = 66.6 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 28/180 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++G GKT     L   L         T  P      E  R        +E  A A
Sbjct: 68  IVVEGLDGTGKTLITRTLAEKLSGM---AVSTPPPQFAEVRETFRS------QEEVVARA 118

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123
               ++AA     E+++  A  +  +++ DR+  S+ A       +        D++   
Sbjct: 119 ---FYSAANYIAAEDIL--AASQSAVVVVDRWWCSTCAMALANAHNYDSLPPSGDAVYRW 173

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR----QIFLD 179
                 PD   +L +   + + R++ R           FE + +    + R    + +  
Sbjct: 174 PEDLPAPDAGFLLCVDEAVRVARIRKRAPED-------FEEQRLSSQSEMRRVAMEAYRR 226


>gi|304394866|ref|ZP_07376750.1| conserved hypothetical protein [Pantoea sp. aB]
 gi|304357119|gb|EFM21482.1| conserved hypothetical protein [Pantoea sp. aB]
          Length = 202

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 59/172 (34%), Gaps = 21/172 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           MN  LF++ +G +G GKTT +  + + L+  N  V    E    P    +      +   
Sbjct: 1   MNRQLFVTLDGPKGTGKTTLLESITQVLRADNRKVIRLSEQKSDPFRAESMALVNRLARD 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             VD      E   FA +R   +   +     E  I+L DR+  S  A+   R       
Sbjct: 61  PSVDLEREICER--FALSRAW-ISQNVLTKQPENCIILMDRWYPSDAAF---RRMVPFAE 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +  L  I      PD      T       ++  +R   R     S  +   E
Sbjct: 115 IVQLN-IEHNVRAPDLHVGVVT-----APEVSWERAAARSRGLGSTVIHRLE 160


>gi|218132360|ref|ZP_03461164.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992698|gb|EEC58700.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC
           43243]
          Length = 235

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 67/184 (36%), Gaps = 40/184 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL--------------------------------QRKN 32
           + ISF G +GAGKTTHI LLK+ +                                Q + 
Sbjct: 1   MIISFTGCDGAGKTTHIDLLKKRICNSCKLSGINLLDITNGVLVYENIRDIDLIYKQLEK 60

Query: 33  YDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAIVFAAARLDH---VENVIRPALM 88
           YDV VTR    +    E  R + L        +E    V    + D     E+VI     
Sbjct: 61  YDVIVTRFYMKSKLCNEEQRKIRLGLDSVFNNSERIRKVLDCVKTDSDIWREHVISKLHE 120

Query: 89  EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148
             KI++ DR+     AY     S  +L L  +++     + PD +  L    D   +R  
Sbjct: 121 RNKIIIVDRYYYDEVAY----RSMYNLGLYEVEQYFCDAIKPDLSYALLASFDEIRQRNN 176

Query: 149 NRYS 152
           NR  
Sbjct: 177 NRED 180


>gi|27467244|ref|NP_763881.1| deoxypurine kinase [Staphylococcus epidermidis ATCC 12228]
 gi|27314787|gb|AAO03923.1|AE016745_22 deoxypurine kinase [Staphylococcus epidermidis ATCC 12228]
 gi|329734691|gb|EGG70998.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU028]
          Length = 205

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 86/221 (38%), Gaps = 27/221 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L +          V   P  +   +           +
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++   +L +G  ++ D  +  +  +     D+ +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +D+   R+  R    ES    + E   ++  +K    + 
Sbjct: 106 IFDILTEDIEMPNTIIFLDADLDVLKSRIAQRNRSFES----HIEDDYLLTLKKDYLAYY 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214
           +  +N       +D++     V  +     ILN+V  ++ +
Sbjct: 162 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 201


>gi|238752985|ref|ZP_04614445.1| Thymidylate kinase [Yersinia rohdei ATCC 43380]
 gi|238708807|gb|EEQ01065.1| Thymidylate kinase [Yersinia rohdei ATCC 43380]
          Length = 224

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 60/172 (34%), Gaps = 21/172 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           M+  LF+S +G +GAGKTT +  + + L+  N  V    E    P           +  +
Sbjct: 1   MSRPLFVSLDGPKGAGKTTLLEAITKVLRADNKKVIRLCEKKSDPYRGETMALVNQLARN 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +D      E   FA +R   +   +      G I+L DR+  S  A+   R       
Sbjct: 61  PTLDLEWEVCER--FADSRAW-ISQQVLTKQPPGSIILMDRWYPSDAAF---RRMVPFAE 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +  L  I     MPD      T       DI   R   R     S  +   E
Sbjct: 115 ILQLN-IERNVWMPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKLE 160


>gi|118594496|ref|ZP_01551843.1| Deoxynucleoside kinase [Methylophilales bacterium HTCC2181]
 gi|118440274|gb|EAV46901.1| Deoxynucleoside kinase [Methylophilales bacterium HTCC2181]
          Length = 215

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G+GK+T   LL        +     R P      E  +H  L          
Sbjct: 9   YIVVEGPIGSGKSTLARLLANQFNANMFSEKAERNPFLPKFYEDMKHYALPTQ------- 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123
              + F   R + +  + +        ++ D FL  D  +A     +    L+    + +
Sbjct: 62  ---LFFLFQRANQISELKQNDFFRNG-VVADFFLQKDPIFARLNLDNEEFKLYDQIYRHL 117

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYF-ERKDVMIHE 171
            ++   PD  I L  PVD+   RV+ R    E       L+   E      H 
Sbjct: 118 EIKAPTPDLVIYLQTPVDLLRARVEKRNIGYEQKISTEYLERIAESYSSYFHN 170


>gi|47230082|emb|CAG10496.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 20/162 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++  GKTT    L   L        + R P    +   AR        D+     
Sbjct: 218 IVIEGLDATGKTTLTESLVGAL-----GATLLRSPPQCLSPFRAR-------FDQEPPLI 265

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS---LQ 121
               +A       +  IR A      ++ DRF  S+ AY          H        + 
Sbjct: 266 RRAFYALGNYITADQAIREAGKAP--VIIDRFWHSTAAYAIATALRGPVHNLPAEGSEVY 323

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                   P   ++L L  +   +R+++R  L ++   +  E
Sbjct: 324 RWPGDLFQPHLVVLLTLDPEERRRRLKDRG-LIKTKEEEKLE 364


>gi|327438136|dbj|BAK14501.1| deoxynucleoside kinase [Solibacillus silvestris StLB046]
          Length = 212

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 29/221 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    + +          V   P      E            E+  +
Sbjct: 5   FITVEGPIGVGKTSLSKAVSQTFDYHLLKEIVDENPFLGKFYEDI---------SEWSFQ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124
            E + F   R   + + I   +     ++ D  +  +  +        ++   +S+  I 
Sbjct: 56  TE-MFFLCNRYKQLSD-IHEIIEAQGPVVADYHIFKNLIFAKRTLKPTEYEKYESIYRIL 113

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL-DIA 181
             +   P+  I L   +D  +KR+  R    E     +Y E+     H+     F+    
Sbjct: 114 TADMPKPNMVIYLHASLDTLMKRIAMRGREVEKNISREYIEQLSSDYHQ-----FIGHFE 168

Query: 182 RNQPDRCHIV-------DSAHSFQSVATNILNIVWELVQKR 215
           +  P+   ++       D   S + +   +L +V E +Q+R
Sbjct: 169 KMHPE-IPVISLNGDELDFVKSEEDL-QYVLRLVEEKLQQR 207


>gi|284988973|ref|YP_003407527.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
 gi|284062218|gb|ADB73156.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160]
          Length = 209

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 69/214 (32%), Gaps = 43/214 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGV 59
             G+ I+  G +GAGKTT    L   L  + + V+      G       R  +  +  G 
Sbjct: 3   RRGMCIALLGPDGAGKTTLARSLAAALPVRVHYVY-----SGLWQRRERRSWVDGVRGGP 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118
                   A +  AAR              G +++ DR               +   L+ 
Sbjct: 58  RLRRLLRVARIGMAARWYR---------GLGHLVVLDR--------TPHEVRLRATGLNG 100

Query: 119 SLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            L  ++V+     PD  I+LD P ++   R            LD             R+ 
Sbjct: 101 RLNALAVRLLAPTPDLMILLDAPPEVLFAR----KGEHSVEVLDGL-----------RRS 145

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  +    P     VD+    ++V    + ++ E
Sbjct: 146 YRMMLEQFPAH-ATVDARADAETVRRQAIEVIRE 178


>gi|57866179|ref|YP_187799.1| deoxynucleoside kinase family protein [Staphylococcus epidermidis
           RP62A]
 gi|282874985|ref|ZP_06283860.1| deoxynucleoside kinase [Staphylococcus epidermidis SK135]
 gi|57636837|gb|AAW53625.1| deoxynucleoside kinase family protein [Staphylococcus epidermidis
           RP62A]
 gi|281296313|gb|EFA88832.1| deoxynucleoside kinase [Staphylococcus epidermidis SK135]
 gi|319399689|gb|EFV87938.1| deoxynucleoside kinase family protein [Staphylococcus epidermidis
           FRI909]
          Length = 205

 Score = 66.2 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 85/221 (38%), Gaps = 27/221 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L +          V   P  +   +           +
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++   +L +G  ++ D  +  +  +     D+ +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +D+   R+  R    ES      E   ++  +K    + 
Sbjct: 106 IFDILTEDIEMPNTIIFLDADLDVLKSRIAQRNRSFESQ----IEDDYLLTLKKDYLAYY 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214
           +  +N       +D++     V  +     ILN+V  ++ +
Sbjct: 162 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 201


>gi|255994227|ref|ZP_05427362.1| dTMP kinase [Eubacterium saphenum ATCC 49989]
 gi|255993895|gb|EEU03984.1| dTMP kinase [Eubacterium saphenum ATCC 49989]
          Length = 78

 Score = 65.8 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 137 DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS 196
           D+  D   KR  +R    + +  D  E ++   H K  + +  +A+   DR   +D    
Sbjct: 2   DISHDECYKRRVSR-DKEQGSQCDRLESENDEFHSKVYEGYKILAKENSDRIFTIDGCRD 60

Query: 197 FQSVATNILNIVWELVQK 214
            Q +  +IL+I+   + +
Sbjct: 61  EQKITEDILSILKSRMDR 78


>gi|297566842|ref|YP_003685814.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946]
 gi|296851291|gb|ADH64306.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946]
          Length = 205

 Score = 65.8 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 72/195 (36%), Gaps = 24/195 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG+ G GKTT   LL   L  +     V   P            L       +G 
Sbjct: 1   MYIAIEGVIGVGKTTLTRLLAERLGAEKLLEVVEDNPFLP---------LFYQDPARYGF 51

Query: 65  EAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQ 121
           + +   F  +R   +  + +PAL   G  ++ D   D    +     S     L  D   
Sbjct: 52  KVQVF-FLLSRYKQLLPLAQPALFSRG--VVADYLFDKDAIFASLNLSGAEWDLYADLYS 108

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDI 180
            +S +   PD T+ L  P+ + L+R++ R           FE++ D    E+  + +   
Sbjct: 109 HLSPRIPTPDLTVYLRAPLPVLLERIRRRGRP--------FEQQIDPGYLERLGESYDRH 160

Query: 181 ARNQPDRCHIVDSAH 195
               P    IV++  
Sbjct: 161 FATYPHPLWIVEADQ 175


>gi|229003026|ref|ZP_04160884.1| Deoxyguanosine kinase [Bacillus mycoides Rock1-4]
 gi|228758226|gb|EEM07413.1| Deoxyguanosine kinase [Bacillus mycoides Rock1-4]
          Length = 227

 Score = 65.8 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           +E+  +
Sbjct: 22  FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYENI---------EEWSFQ 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   +E++    L + K ++ D  +  +  +     S +    D    +  
Sbjct: 73  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHILKNLIF--ASRSLKDAQYDKYMQIYR 129

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           I  Q+  +P+  + L   ++   KR+  R    E  
Sbjct: 130 ILTQDMPVPNVIVYLTASLETLQKRIAMRGRKFEKN 165


>gi|9971893|gb|AAG10455.1|AF279106_17 predicted deoxypurine kinase [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 221

 Score = 65.8 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 18/170 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG  G GKTT  + +       NYD  +  +P   P     ++   +       A
Sbjct: 12  KYIAIEGPIGVGKTTLANKIAETF---NYDSFL-EQPAENPF---LKNFYKNPSQ---SA 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
            A  + F   R+  ++++ + +L E  + + D FL   D  +A +    + +    D + 
Sbjct: 62  LATQLFFLFQRMQQIQDLKQRSLFE-TVRVAD-FLIEKDRLFA-EVTLSNEEMDLYDKVY 118

Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169
           + +++    PD  I L  P+D+   R+  R ++ E    LDY ER +   
Sbjct: 119 DHLTLDAPTPDLVIYLQAPIDVLKDRITKRGNINEQYLTLDYLERLNDAY 168


>gi|73663466|ref|YP_302247.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495981|dbj|BAE19302.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 205

 Score = 65.8 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 21/197 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EG  G GK++    L +  +       +T  P  +   E            
Sbjct: 1   MKK-QFIAVEGPIGVGKSSLAHKLSQTYKYYEEKEIITENPFLSDFYEDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDS 119
           ++  + E + F   R    +++   AL+E  I+  D  +  +  +      ++++     
Sbjct: 51  KWSFQTE-MFFLCNRYKQFQDL---ALIENGIV-SDYHIYKNKIFANNTLTTTEYNKFSR 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +     R+ +R    E    D +    ++  ++    + 
Sbjct: 106 IYDILTEDLEMPNMIIFLDADLATLKSRIAHRNRSFEHQIADDY----LLNLKRDYNDYY 161

Query: 179 DIARNQPDRCHIVDSAH 195
           +  +N  +R   +D+ H
Sbjct: 162 ESLKNDGERVIRIDTTH 178


>gi|91774953|ref|YP_544709.1| deoxynucleoside kinase [Methylobacillus flagellatus KT]
 gi|91708940|gb|ABE48868.1| deoxynucleoside kinase [Methylobacillus flagellatus KT]
          Length = 215

 Score = 65.4 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 29/179 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKR------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +I  EG  G+GKTT  + L         L+    +  + +     P     R+ L     
Sbjct: 9   YIVVEGPIGSGKTTLANKLADMFPVNLLLENAGANPFLPKFYQDAP-----RYAL----- 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFL 117
                     +F   R++ + ++I+  +      + D FL  D  +A     D    L+ 
Sbjct: 59  ----PTQMFFLF--QRVEQIRDLIQRDMFNQAT-IADFFLEKDPLFAQMNLNDEEYALYR 111

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEK 172
              + + VQ   PD  I L  PV+   +RV  R +  E       L            +
Sbjct: 112 QMYKHLHVQVPTPDLVIYLQSPVETLHERVNQRGNAYEQEIPREYLARLSDAYSDFFHR 170


>gi|228995412|ref|ZP_04155083.1| Deoxyguanosine kinase [Bacillus mycoides Rock3-17]
 gi|228764338|gb|EEM13214.1| Deoxyguanosine kinase [Bacillus mycoides Rock3-17]
          Length = 227

 Score = 65.4 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           +E+  +
Sbjct: 22  FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYENI---------EEWSFQ 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   +E++    L + K ++ D  +  +  +     S +    D    +  
Sbjct: 73  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHILKNLIF--ASRSLKDAQYDKYMQIYR 129

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           I  Q+  +P+  + L   ++   KR+  R    E  
Sbjct: 130 ILTQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 165


>gi|118088982|ref|XP_419937.2| PREDICTED: similar to LOC129607 protein [Gallus gallus]
          Length = 287

 Score = 65.4 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 68/237 (28%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  + FEG++  GKTT    +K  L      V +   P                  
Sbjct: 87  RKGEFPVVVFEGLDATGKTTVTQSVKDALGA----VLLRSPPACISQWRTI-------FD 135

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E      A  +AA        + + +      ++ DR+  S+ AY    ++        
Sbjct: 136 EEPTPIRRAF-YAAGNYILASEIAKASTQAP--VIVDRYWHSTAAYTVATETDG------ 186

Query: 120 LQEISVQEVMPDCTIILD-------------------LPVDIGLKRVQNRYSLR------ 154
               ++Q + PD     D                   +  +   +R++ R   R      
Sbjct: 187 ----NIQNLPPDH----DAVYKWPEDLLKPDLVLLLTVSPEERARRLEARGLERTKEEAE 238

Query: 155 -ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            E+  L           ++  + +  +    P  C  VD++ S + V   +L ++ +
Sbjct: 239 LEANSL---------FRQRIEESYRRMV--NPA-CQEVDASPSKEEVFKTVLQLIKK 283


>gi|329729474|gb|EGG65877.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU144]
 gi|329737863|gb|EGG74095.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU045]
          Length = 205

 Score = 65.4 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 86/221 (38%), Gaps = 27/221 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L +          V   P  +   +           +
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R   + ++   +L +G  ++ D  +  +  +     D+ +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +++   R+  R    ES    + E   ++  +K    + 
Sbjct: 106 IFDILTEDIEMPNTIIFLDADLNVLKSRIAQRNRSFES----HIEDDYLLTLKKDYLAYY 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214
           +  +N       +D++     V  +     ILN+V  ++ +
Sbjct: 162 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 201


>gi|229027867|ref|ZP_04184024.1| Deoxyguanosine kinase [Bacillus cereus AH1271]
 gi|228733443|gb|EEL84268.1| Deoxyguanosine kinase [Bacillus cereus AH1271]
          Length = 211

 Score = 65.4 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++    R+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQARIAKRGREFEKN 149


>gi|166240506|ref|XP_641009.2| deoxyguanosine kinase [Dictyostelium discoideum AX4]
 gi|182647414|sp|Q54UT2|DGK_DICDI RecName: Full=Deoxyguanosine kinase; Short=dGK; AltName: Full=DddGK
 gi|56384964|gb|AAV85947.1| deoxyguanosine kinase [Dictyostelium discoideum]
 gi|165988632|gb|EAL67033.2| deoxyguanosine kinase [Dictyostelium discoideum AX4]
          Length = 285

 Score = 65.0 bits (158), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 21/162 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  EG   AGKT   S L   L    Y V +  EP  T          LS    E   
Sbjct: 33  KIIILEGNISAGKTYLSSKLGDLL---GYKVFL--EPTATNP-------YLSLFYKEPSK 80

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A  +       R +   N ++ +L   + ++ DR + S + +     S   +  +  +E
Sbjct: 81  YALIMQKWLLNQRYNTFLNALQYSLENEQGVILDRSVYSDWVFAENCRSEGLISAEGFKE 140

Query: 123 ISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            +           +P+ T+ LD+     L+R+QNR    E +
Sbjct: 141 YNSIRDRFLSNIPIPNVTLFLDVDPKQCLQRIQNRKRDCEQS 182


>gi|228937322|ref|ZP_04099970.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970208|ref|ZP_04130869.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228976778|ref|ZP_04137192.1| Deoxyguanosine kinase [Bacillus thuringiensis Bt407]
 gi|228782940|gb|EEM31104.1| Deoxyguanosine kinase [Bacillus thuringiensis Bt407]
 gi|228789509|gb|EEM37427.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228822347|gb|EEM68327.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326937812|gb|AEA13708.1| deoxyguanosine kinase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 211

 Score = 65.0 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQKKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|229159194|ref|ZP_04287220.1| Deoxyguanosine kinase [Bacillus cereus R309803]
 gi|228624275|gb|EEK81075.1| Deoxyguanosine kinase [Bacillus cereus R309803]
          Length = 211

 Score = 65.0 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQKKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|220934059|ref|YP_002512958.1| DNA polymerase III, epsilon subunit [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995369|gb|ACL71971.1| DNA polymerase III, epsilon subunit [Thioalkalivibrio sp. HL-EbGR7]
          Length = 216

 Score = 65.0 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 30/205 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G GKT+    L   L  +     +   P   P  E                +
Sbjct: 8   YIVVEGPIGVGKTSLARRLAETLNAE----LLLEAPEENPFLE---RFYQDPRGAALPTQ 60

Query: 66  AEAIVFAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              + F   R+  +       + +P  +   ++  DR     +A Q   D  +H   + +
Sbjct: 61  ---LFFLMQRVRQMAELRQGDIFKPVRVSDFLIEKDR----LFA-QVTLDDDEHSLYEQV 112

Query: 121 Q-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             ++++    PD  I L  PV++ L+R+  R    E          D     +  + +  
Sbjct: 113 YSQMTLDAPKPDLVIYLQAPVEVLLERIARRGRGYER-------LMDSAYLHRLSEAYAS 165

Query: 180 IARNQPD-RCHIVDSAHSFQSVATN 203
              +  D    IV+++     V  +
Sbjct: 166 FFYHYEDAPLLIVNASG-IDWVNRD 189


>gi|119591692|gb|EAW71286.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_d [Homo
          sapiens]
          Length = 83

 Score = 65.0 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I  EG++ AGK+T    L   L    +   + R P  +          L    D 
Sbjct: 4  RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62

Query: 62 FGAEAEAIVFAAARLDHV 79
              +  ++F+A R + V
Sbjct: 63 VEDHSVHLLFSANRWEQV 80


>gi|321456889|gb|EFX67986.1| hypothetical protein DAPPUDRAFT_231763 [Daphnia pulex]
          Length = 397

 Score = 65.0 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 51/179 (28%), Gaps = 24/179 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             I  EG   AGK      L   L    +      +          R V           
Sbjct: 79  KLIVVEGPPAAGKRALAKELAEELDMAYFPSPNVADCYINKYGYDLRQVDHKLPESCKSY 138

Query: 54  -----LLSCGVDEFGAEAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQG 107
                L           A   +   +    +    +   L  G+ ++ DR   S  AY  
Sbjct: 139 DENDFLKDPMRGNGSKAARFQLTKLSLRYKLHLEALAHILNTGQGVVMDRSPFSDLAYMT 198

Query: 108 ERDSSQHL------FLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
               +  +      F   ++  ++  +  P   I LD+PVD   +R++ R    E   +
Sbjct: 199 AMTETGIISKNVYNFYHQVRNNALFALWRPHLVIYLDVPVDETRRRIEARNLPNEKDSM 257


>gi|163938028|ref|YP_001642912.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4]
 gi|229053866|ref|ZP_04195303.1| Deoxyguanosine kinase [Bacillus cereus AH603]
 gi|229131027|ref|ZP_04259943.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST196]
 gi|229165009|ref|ZP_04292807.1| Deoxyguanosine kinase [Bacillus cereus AH621]
 gi|163860225|gb|ABY41284.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4]
 gi|228618461|gb|EEK75488.1| Deoxyguanosine kinase [Bacillus cereus AH621]
 gi|228652439|gb|EEL08360.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST196]
 gi|228721476|gb|EEL72993.1| Deoxyguanosine kinase [Bacillus cereus AH603]
          Length = 211

 Score = 65.0 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    L   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKELSTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|229083332|ref|ZP_04215692.1| Deoxyguanosine kinase [Bacillus cereus Rock3-44]
 gi|228699979|gb|EEL52604.1| Deoxyguanosine kinase [Bacillus cereus Rock3-44]
          Length = 211

 Score = 65.0 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYENI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   +E++    L + K ++ D  +  +  +     + +    D    +  
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIF--ASRTLKDAQYDKYMQIYR 113

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           I  Q+  +P+  + L   ++   KR+  R    E  
Sbjct: 114 ILTQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|229009530|ref|ZP_04166759.1| Deoxyguanosine kinase [Bacillus mycoides DSM 2048]
 gi|228751741|gb|EEM01538.1| Deoxyguanosine kinase [Bacillus mycoides DSM 2048]
          Length = 211

 Score = 64.7 bits (157), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    L   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKELSTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|145206872|gb|ABP37829.1| thymidylate kinase [Candidatus Phytoplasma solani]
          Length = 99

 Score = 64.7 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 5/92 (5%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I FEG++G+GKT+ I  L+  L+       + +  G +   +  R + L+    +   
Sbjct: 13 KLIVFEGLDGSGKTSLIHALQPQLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 67

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +  A        +I   L   ++++ D
Sbjct: 68 LTRFYLSLANMTQIQAELIVSQLKNNQLIILD 99


>gi|293363201|ref|ZP_06610085.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2]
 gi|292553060|gb|EFF41809.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2]
          Length = 218

 Score = 64.7 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 79/223 (35%), Gaps = 15/223 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS  G+ G+GK+T  S L    Q          +                    +   
Sbjct: 1   MIISISGMIGSGKSTLSSKLHNHFQNSII--VEEFQKDDLIFNTFLDWCYQQKPNIDISF 58

Query: 65  EA---EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----LFL 117
           +A   EA+  +    DH++          + +  DRF    Y +       +        
Sbjct: 59  QAYIVEAL--SQNFYDHLKIYKNLDKNSNRYMFLDRFTLEHYVFAKVTLLKKEPKYFEAF 116

Query: 118 DSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++L E ++ +V   PD  I LD+      +R+  R    E    D  E     + +  +Q
Sbjct: 117 EALFE-NILDVKTNPDFAIYLDVDFLTAKQRIFKRQRASEVDNWDANEAYFKQLSDMYKQ 175

Query: 176 IFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQKRVS 217
            F+ +A        I+D+ + + + +    +N +    QK+++
Sbjct: 176 EFIKLALKYSIPFAIIDANSLNEEQILELAINKIALYKQKQIN 218


>gi|228989229|ref|ZP_04149223.1| Deoxyguanosine kinase [Bacillus pseudomycoides DSM 12442]
 gi|228770504|gb|EEM19074.1| Deoxyguanosine kinase [Bacillus pseudomycoides DSM 12442]
          Length = 211

 Score = 64.7 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           +E+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISAHMQLHLLKEIVDENPFLGKFYENI---------EEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   +E++    L + K ++ D  +  +  +     S +    D    +  
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHILKNLIF--ASRSLKDAQYDKYMQIYR 113

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           I  Q+  +P+  + L   ++   KR+  R    E  
Sbjct: 114 ILTQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|238854854|ref|ZP_04645184.1| putative thymidylate kinase [Lactobacillus jensenii 269-3]
 gi|260664141|ref|ZP_05864994.1| predicted protein [Lactobacillus jensenii SJ-7A-US]
 gi|282933932|ref|ZP_06339280.1| putative thymidylate kinase [Lactobacillus jensenii 208-1]
 gi|313472356|ref|ZP_07812848.1| putative thymidylate kinase (dTMP kinase) [Lactobacillus jensenii
           1153]
 gi|238832644|gb|EEQ24951.1| putative thymidylate kinase [Lactobacillus jensenii 269-3]
 gi|239529787|gb|EEQ68788.1| putative thymidylate kinase (dTMP kinase) [Lactobacillus jensenii
           1153]
 gi|260562027|gb|EEX27996.1| predicted protein [Lactobacillus jensenii SJ-7A-US]
 gi|281302021|gb|EFA94275.1| putative thymidylate kinase [Lactobacillus jensenii 208-1]
          Length = 221

 Score = 64.7 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 94/248 (37%), Gaps = 60/248 (24%)

Query: 1   MNSGLFISFEGIEGAGKTT----------------HISLLKRFLQRKNYDVHVTREPGGT 44
           M+ G+ I  EGI  +GKTT                 I  L+  L     ++    E    
Sbjct: 1   MSRGIIILIEGISNSGKTTLCNSLKNKANFEIIPEAIRYLENRLNDCGDNILFVPENSNQ 60

Query: 45  PAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
                   +L     ++        ++ A  L            +G+ ++ D+   S  A
Sbjct: 61  EVLNQ--ELLFDIEFEK--------LYDANFLA----------QKGENVVIDKSAFSILA 100

Query: 105 ---------YQGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSL- 153
                     QG  + ++  F +  ++I+  ++  PD +I+L   ++I  +R +NR    
Sbjct: 101 TANAFQSSIIQGTYEIAEKFFHEYEKKIARFDLAKPDLSILLKADLEISEERNKNRKHKL 160

Query: 154 --RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWE 210
               ++ +  F+++ V+  E     F  I     +   I+D+++ S + V   ++  +  
Sbjct: 161 LNIWTSPITRFKQERVLESE-----FEKI-----NNKMILDTSNMSKEEVYKQVIETIKL 210

Query: 211 LVQKRVSP 218
           ++ + +S 
Sbjct: 211 MIGRDISE 218


>gi|42560979|ref|NP_975430.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492476|emb|CAE77072.1| Deoxynucleoside kinase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320814|gb|ADK69457.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 214

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 32/222 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT +  LK+ L +K   V+ T      P    A         D      
Sbjct: 3   IAIFGTTGAGKTTLLENLKKLLDKKYVFVNETS--LDCPYFNKAYD---DSNSDVQDYNY 57

Query: 67  EA-IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHLFLDSLQE 122
           +  +     R   ++  I+      + ++ DR +  S  +               +  ++
Sbjct: 58  KLDLWMLTDR---MKTFIK--YKNHQNVIYDRSILDSMVFSQTDHIYNRLDDRDYNVFKD 112

Query: 123 ISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +  ++P            D  I L +     +KR+  R    E    D F      ++
Sbjct: 113 YFLTCILPNIFDCQTNNKIFDIVIYLKVDPYKAIKRINKRSRDIELDTNDLFWLNLTKVY 172

Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211
           E    I+ ++    P    ++D+       +A  I N + E+
Sbjct: 173 EFWYDIYKEVI---P--FWVIDANVDEPNYIANMIANKIKEI 209


>gi|50120419|ref|YP_049586.1| hypothetical protein ECA1481 [Pectobacterium atrosepticum SCRI1043]
 gi|49610945|emb|CAG74390.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 212

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 60/175 (34%), Gaps = 27/175 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           M+  LFIS +G +GAGKTT +  + + L+  N  V    E    P           +  +
Sbjct: 1   MSRPLFISLDGPKGAGKTTLLEAITKVLRADNKKVIRLCEKKSDPYRGETMALVNKLARN 60

Query: 57  CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
             +D      E   FA +R     HV     P      I+L DR+  S  A+   R    
Sbjct: 61  PTLDLEWEICER--FADSRAWISLHVLTKQPP----DSIILMDRWYPSDAAF---RRMVP 111

Query: 114 HLFLDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
              +  L  I      PD      T       DI   R   R     S  +  FE
Sbjct: 112 FAEILQLN-IERNVRTPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKFE 160


>gi|118340537|gb|ABK80587.1| putative deoxynucleoside kinase [uncultured marine Nitrospinaceae
           bacterium]
          Length = 216

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 16/169 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EG  GAGKT+ ++LL++   +    V +  E    P              + +  
Sbjct: 9   RFIAVEGSIGAGKTSLVNLLEQ---QYGARVIL-EENDSNPFITKFYE-----DQETYSF 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           + +   F  +R +    + +  L    +++ D +L   D  +A     D    L+     
Sbjct: 60  QTQIY-FLLSRYNQYIELAQRDLFNSVVVI-D-YLFQRDKIFAQLNLEDHEYRLYEQIYN 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMI 169
            IS +   PD  I L    ++ L+RV  R    ES    DY +  +   
Sbjct: 117 LISSKAPKPDLVIFLQASTEVLLERVSKRGREYESFMDPDYLDSVNKAF 165


>gi|159901602|ref|YP_001547848.1| thymidylate kinase-like [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894641|gb|ABX07720.1| Thymidylate kinase-like [Herpetosiphon aurantiacus ATCC 23779]
          Length = 230

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 65/226 (28%), Gaps = 41/226 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFG 63
           +I+  G +G GKTT +  L   L  +   V     R P            +      E  
Sbjct: 20  YIT--GSDGTGKTTQVHRLMEVLTAQGLPVIHRWLRFPFRLSGLLLVYARIRGLSWYEAH 77

Query: 64  AEAEA---IVFAAARLDHVENV--IRPAL-----------MEGKILLCDRFLDSSYAYQG 107
                      A+  + HV  +     AL             G I++C+RF+    A   
Sbjct: 78  PYGRQGYWDFHASWLMQHVFPIVLWFDALSVAIQAVYWPISRGNIIVCERFVVDMLADLM 137

Query: 108 ERDSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACL-DYFER 164
                  L         ++ ++P     I+LD       +R   R  L     L D    
Sbjct: 138 VATQDFGLLKRWYARWFMR-LLPARTLVILLDGDPVHIRQR---RPDLAYDRVLSDRI-- 191

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                    R     IA        ++ +  S  ++   I   V +
Sbjct: 192 ------RAVR----IIAAQCG--WPLIAADQSIDAIHQTICTFVED 225


>gi|229100806|ref|ZP_04231624.1| Deoxyguanosine kinase [Bacillus cereus Rock3-28]
 gi|228682613|gb|EEL36672.1| Deoxyguanosine kinase [Bacillus cereus Rock3-28]
          Length = 211

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKFLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|228475248|ref|ZP_04059973.1| deoxynucleoside kinase family protein [Staphylococcus hominis
           SK119]
 gi|228270713|gb|EEK12122.1| deoxynucleoside kinase family protein [Staphylococcus hominis
           SK119]
          Length = 205

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 82/221 (37%), Gaps = 31/221 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    + +       +  +   P  +   +            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLTHKISQTFNYYEENEIINENPFLSDFYDDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           ++  + E + F   R    +++ +  + +G  ++ D  +  +  +   R++      D  
Sbjct: 51  KWSFQTE-MFFLCNRYKQAQDIAK--INQG--VVSDYHIYKNRIF--ARNTLNESEFDKF 103

Query: 121 QEIS---VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             I     +++  P+  I LD  +D+  +R+  R    E       E   ++  +K    
Sbjct: 104 NRIFNILTEDLESPNMIIFLDADLDVLKRRIAKRNRSFEHQ----IEDSYLLNLKKDYLS 159

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELV 212
           F +  +N+     ++D++     V        ILN +  ++
Sbjct: 160 FYETLKNEGANVILIDTS-DLDFVQNESDYQLILNQIKPMI 199


>gi|254468053|ref|ZP_05081459.1| deoxyadenosine kinase, putative [beta proteobacterium KB13]
 gi|207086863|gb|EDZ64146.1| deoxyadenosine kinase, putative [beta proteobacterium KB13]
          Length = 217

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 63/195 (32%), Gaps = 23/195 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G+GK+T   +L              + P      +      L          
Sbjct: 10  YIVVEGPIGSGKSTLSRMLSENFGSNFIKEKADQNPFLPKFYKNMSQYALPTQ------- 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDSLQEI 123
              + F   R + + ++ +        +  D F+     +A Q   D  +      + + 
Sbjct: 63  ---LFFLFQRAEQINDIKQNDFFHKGTV-ADFFIYKDPIFA-QLNLDEEELKLYKQIYQF 117

Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYF-ERKDVMIHEKRRQIF 177
             ++   PD  I L  PV++  KRV+ R    E       L+   E      H K  Q  
Sbjct: 118 LELKVPKPDLVIYLQTPVELLKKRVERRSINYEKTISTEYLEKIAEAYSNFFHFKYNQKL 177

Query: 178 LDIARNQPDRCHIVD 192
           L +     +   I+D
Sbjct: 178 LIV---NNENLDIID 189


>gi|70727434|ref|YP_254350.1| hypothetical protein SH2435 [Staphylococcus haemolyticus JCSC1435]
 gi|68448160|dbj|BAE05744.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 205

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 85/219 (38%), Gaps = 27/219 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        +   P  +   +            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLTHKLSQTLNYYEEKEIIDENPFLSDFYDDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS 119
           ++  + E + F   R    +++ +  + +G  ++ D  +  +  +     S+      D 
Sbjct: 51  KWSFQTE-MFFLCNRYKQAKDIAK--MTQG--VVSDYHIYKNKIFARNTLSNNEFDKFDR 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +I  +++ MP+  I LD  +++  +R+  R    E     + E   ++  ++    F 
Sbjct: 106 IFDILTEDLEMPNMIIFLDADLEVLKQRIAQRNRSFEH----HIEDDYLLNLKEDYLTFY 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELV 212
           +  +++     +++++     V  +     IL  +  ++
Sbjct: 162 NAMKSEGANVVLINTS-EIDFVKNDSDYQSILEKIRPMI 199


>gi|329896234|ref|ZP_08271412.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088]
 gi|328921905|gb|EGG29272.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088]
          Length = 224

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 60/172 (34%), Gaps = 19/172 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG+ G GKTT    L +  Q +      T  P  T   E  R            A 
Sbjct: 17  FIAIEGVIGVGKTTLARRLAQTFQYQTILEDPTANPFLTKFYEDMRQ----------HAL 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
           A  + F   R   ++ + +  +     +  D F+   D  +A          L+    Q+
Sbjct: 67  ATQLSFLFQRTQAIQALRQSDIFAPLHV-AD-FMLQKDPLFARLTLNSEEYELYDKVYQQ 124

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIH 170
           ++V    PD  I L  P D+ L R++ R    E       L+   +      
Sbjct: 125 MTVDVPRPDLVIYLQAPTDVLLSRIERRGISSERRISADYLNKLNQAYSEFF 176


>gi|110004424|emb|CAK98762.1| putative deoxynucleoside kinase protein [Spiroplasma citri]
          Length = 202

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 66/224 (29%), Gaps = 46/224 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G+ G GK+T   LL           H                        +   + 
Sbjct: 3   ITLAGVVGVGKSTVSKLL-------GKKHHYMVMDEPVEENPYLDQYYADPK--DMAFKM 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF---------------LDSSYAYQGERDS 111
           +  +  A      +  I         ++ DR                  ++  Y+  ++ 
Sbjct: 54  QVYMVMARSKQLKQAKITSN------IIFDRSILEDPIFVDVLYELGYMNTTDYKVYKEF 107

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF----ERKDV 167
              + L SL     + + P+  + L +  +I ++R+  R    E      +     RK  
Sbjct: 108 YDVVVLQSLYL--DENIKPELVVYLRVDPEIAMERITKRGRASEQNIGSAYWTLLNRKYE 165

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWE 210
             +E+ +  F            ++D+   + + +   I   + E
Sbjct: 166 EWYERSKDKF---------NFLVIDANHKTPEEIVAIISEKLIE 200


>gi|314937114|ref|ZP_07844461.1| deoxynucleoside kinase family protein [Staphylococcus hominis
           subsp. hominis C80]
 gi|313655733|gb|EFS19478.1| deoxynucleoside kinase family protein [Staphylococcus hominis
           subsp. hominis C80]
          Length = 205

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 83/221 (37%), Gaps = 31/221 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    + +       +  +   P  +   +            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLTHKISQTFNYYEENEIINENPFLSDFYDDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           ++  + E + F   R    +++ +  + +G  ++ D  +  +  +   R++      D  
Sbjct: 51  KWSFQTE-MFFLCNRYKQAQDIAK--INQG--VVSDYHIYKNRIF--ARNTLNESEFDKF 103

Query: 121 QEIS---VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             I     +++ +P+  I LD  +D+  +R+  R    E       E   ++  +K    
Sbjct: 104 NRIFNILTEDLELPNMIIFLDADLDVLKRRIAKRNRSFEHQ----IEDSYLLNLKKDYLS 159

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELV 212
           F +  +N+     ++D++     V        ILN +  ++
Sbjct: 160 FYETLKNEGANVILIDTS-DLDFVQNESDYQLILNQIKPMI 199


>gi|56964653|ref|YP_176384.1| deoxypurine kinase [Bacillus clausii KSM-K16]
 gi|56910896|dbj|BAD65423.1| deoxypurine kinase [Bacillus clausii KSM-K16]
          Length = 207

 Score = 63.9 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 69/204 (33%), Gaps = 28/204 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG+ G GKTT    +     R+     V   P      +          ++E+  +
Sbjct: 5   FICVEGVIGVGKTTLAKAIATHYGRECLLEIVEENPFLEKFYD---------NMEEWSFQ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLDSLQEI 123
            E + F   R+  +E+ I P L   K+++ D  +  +  +A Q         +    Q +
Sbjct: 56  TE-MFFLCNRVKQLED-IGPVL-NHKLVVSDYHICKNLIFARQTLSAFKWSQYRRIFQIL 112

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFL---- 178
           +     P   I L   +     R+  R           FE++ D     K    +     
Sbjct: 113 NEPLPKPTVVIYLKAGLSTLTNRITKRGRP--------FEKEMDPNYLRKLSDDYEATMA 164

Query: 179 DIARNQPDRCHIVDSAHSFQSVAT 202
           ++A+ +      +D       VA 
Sbjct: 165 ELAKEENTTVLTID-TDDLDFVAN 187


>gi|229074080|ref|ZP_04207129.1| Deoxyguanosine kinase [Bacillus cereus Rock4-18]
 gi|229094740|ref|ZP_04225748.1| Deoxyguanosine kinase [Bacillus cereus Rock3-29]
 gi|229113694|ref|ZP_04243131.1| Deoxyguanosine kinase [Bacillus cereus Rock1-3]
 gi|228669760|gb|EEL25165.1| Deoxyguanosine kinase [Bacillus cereus Rock1-3]
 gi|228688678|gb|EEL42548.1| Deoxyguanosine kinase [Bacillus cereus Rock3-29]
 gi|228709043|gb|EEL61167.1| Deoxyguanosine kinase [Bacillus cereus Rock4-18]
          Length = 211

 Score = 63.9 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|110833199|ref|YP_692058.1| deoxynucleoside kinase [Alcanivorax borkumensis SK2]
 gi|110646310|emb|CAL15786.1| Deoxynucleoside kinase [Alcanivorax borkumensis SK2]
          Length = 233

 Score = 63.9 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 75/225 (33%), Gaps = 42/225 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKR------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            FI+ EG  GAGKT+    L         L++ + +  +TR                   
Sbjct: 24  RFIAVEGPIGAGKTSLAKRLAMTFGYDLLLEQADDNPFLTRFY---------------QD 68

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              +  + E + F   R D +  V +  L  G   + D  +D +  +           L 
Sbjct: 69  PTRYALQTE-LFFLFQRADQLRQVQQQDLFAGPR-IADFLIDKNRLFAQVTLDEDEFQLY 126

Query: 119 SLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEK 172
           S  +  ++V    PD  I L  P  +  +R+ +R +  E       LD            
Sbjct: 127 SNVDDHLTVDAPRPDLVIYLQAPSQVLRQRIGHRGNNFEQGIASDYLDKLSNAYTEFFH- 185

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVA--TNILNIVWELVQKR 215
               F D A        IV++A     V    +   ++ EL+  R
Sbjct: 186 ----FYDRAPL-----LIVNAA-EIDLVNHDRDYQQLISELLDIR 220


>gi|260811992|ref|XP_002600705.1| hypothetical protein BRAFLDRAFT_123496 [Branchiostoma floridae]
 gi|229285994|gb|EEN56717.1| hypothetical protein BRAFLDRAFT_123496 [Branchiostoma floridae]
          Length = 368

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 22/180 (12%)

Query: 12  IEG---AGKTTHISLLKRFLQRKNY---DVHVT--REPGGTPAAEA------ARHVLLSC 57
           I+G    GKTT    L   L  K +   DVH     E  G+P  +               
Sbjct: 75  IDGNLAVGKTTLGKELAEKLGMKYFPEVDVHYFDRFEGDGSPMDKKFSGNVSLEQFYKDP 134

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--- 114
              +  +    +V    R       +   +  G+ ++ DR + S + +       ++   
Sbjct: 135 SDPDGHSIRFQLVMFVLRYFQFCEAMNHLISTGQGVILDRSVHSDFVFLEAMYKERYIKK 194

Query: 115 ---LFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169
               +   ++E  + +++P    I LD+P +   K++Q R    E    L Y E  D   
Sbjct: 195 HCYDYYYMVKEEVINKILPPHLVIYLDVPPEEVQKKIQKRGIEMEKEIPLTYLETLDDAY 254


>gi|30018292|ref|NP_829923.1| deoxyguanosine kinase [Bacillus cereus ATCC 14579]
 gi|206972677|ref|ZP_03233617.1| deoxynucleoside kinase family protein [Bacillus cereus AH1134]
 gi|228918970|ref|ZP_04082351.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228950567|ref|ZP_04112703.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228956460|ref|ZP_04118258.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229039924|ref|ZP_04189690.1| Deoxyguanosine kinase [Bacillus cereus AH676]
 gi|229067783|ref|ZP_04201102.1| Deoxyguanosine kinase [Bacillus cereus F65185]
 gi|229107705|ref|ZP_04237343.1| Deoxyguanosine kinase [Bacillus cereus Rock1-15]
 gi|229125536|ref|ZP_04254570.1| Deoxyguanosine kinase [Bacillus cereus BDRD-Cer4]
 gi|229142825|ref|ZP_04271269.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST24]
 gi|229148428|ref|ZP_04276686.1| Deoxyguanosine kinase [Bacillus cereus m1550]
 gi|229176619|ref|ZP_04304025.1| Deoxyguanosine kinase [Bacillus cereus 172560W]
 gi|229188304|ref|ZP_04315355.1| Deoxyguanosine kinase [Bacillus cereus ATCC 10876]
 gi|296500853|ref|YP_003662553.1| deoxyguanosine kinase [Bacillus thuringiensis BMB171]
 gi|29893832|gb|AAP07124.1| Deoxyguanosine kinase [Bacillus cereus ATCC 14579]
 gi|87312651|gb|ABD37691.1| deoxyguanosine kinase [synthetic construct]
 gi|206732397|gb|EDZ49579.1| deoxynucleoside kinase family protein [Bacillus cereus AH1134]
 gi|228595172|gb|EEK52940.1| Deoxyguanosine kinase [Bacillus cereus ATCC 10876]
 gi|228606849|gb|EEK64264.1| Deoxyguanosine kinase [Bacillus cereus 172560W]
 gi|228635037|gb|EEK91608.1| Deoxyguanosine kinase [Bacillus cereus m1550]
 gi|228640639|gb|EEK97025.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST24]
 gi|228657920|gb|EEL13724.1| Deoxyguanosine kinase [Bacillus cereus BDRD-Cer4]
 gi|228675745|gb|EEL30951.1| Deoxyguanosine kinase [Bacillus cereus Rock1-15]
 gi|228715336|gb|EEL67193.1| Deoxyguanosine kinase [Bacillus cereus F65185]
 gi|228727414|gb|EEL78605.1| Deoxyguanosine kinase [Bacillus cereus AH676]
 gi|228803217|gb|EEM50037.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228809110|gb|EEM55593.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228840685|gb|EEM85945.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|296321905|gb|ADH04833.1| deoxyguanosine kinase [Bacillus thuringiensis BMB171]
          Length = 211

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|207723646|ref|YP_002254044.1| hypothetical protein RSMK01029 [Ralstonia solanacearum MolK2]
 gi|206588849|emb|CAQ35811.1| hypothetical protein RSMK01029 [Ralstonia solanacearum MolK2]
          Length = 187

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 16/181 (8%)

Query: 31  KNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAEAEAIVFA--AARLDHVENVIRPAL 87
           +      T  P      +   R  L   G  +   E EA++    A    +  N + P L
Sbjct: 11  RTRPCVSTWAPTQWWRHDINIRRALYGEGPGQPVPE-EALLHFNLADCHAYQANAVMPPL 69

Query: 88  MEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEISVQEVMPDCTIILDLPVDIGLKR 146
             G+ ++ +R+L    A    R  +   +L D++  I      PD   +LD   ++ + R
Sbjct: 70  GRGEFVVSNRYLFDMLALFEARGMTLPTWLPDAVARIV----RPDFCFVLDGSSEVFVDR 125

Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
           +  R           F++ DV    +       +A+       ++ +      +    L+
Sbjct: 126 IVKRDGPMPG----RFDQ-DVQFVARYNAALRRLAQEND--LTVLRAEADPDHIVQQCLD 178

Query: 207 I 207
           +
Sbjct: 179 V 179


>gi|298717143|ref|YP_003729785.1| hypothetical protein Pvag_pPag30044 [Pantoea vagans C9-1]
 gi|298361332|gb|ADI78113.1| hypothetical protein Pvag_pPag30044 [Pantoea vagans C9-1]
          Length = 205

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 21/172 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           M+  LF+S +G +GAGKTT +  + + L+  N  V    E    P    +      +   
Sbjct: 1   MSRQLFVSLDGPKGAGKTTLLEAITQVLRADNMKVIRLSEKKSDPFRAESMALVNRLARD 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D      +   FA +R   +   +     +  ++L DR+  S  A+   R       
Sbjct: 61  PSADLEWEICQR--FAVSRAW-ISQNVLAKQPQDSVILMDRWYPSDAAF---RRMVSFTE 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +  L   +     PD      T       ++  +R   R     S  +   E
Sbjct: 115 ILQLNR-AHNVRAPDLHVGVVT-----APEVSWERAAARSRGLGSTVIHRLE 160


>gi|203284158|ref|YP_002221898.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia
           duttonii Ly]
 gi|201083601|gb|ACH93192.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia
           duttonii Ly]
          Length = 206

 Score = 63.9 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 20/172 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GL I  EG+ G GKTT   +L       + ++   RE                    
Sbjct: 1   MEAGLVIVIEGLIGVGKTTLGHIL-----SLDLEIPFYRELDNEFTLSMLNEFYKD-KFR 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQ 113
                  + +    R   +++V +    +GK +L DR + S   +           D+  
Sbjct: 55  WAFPMQISFLNE--RFKLIKSVFK---SKGKGIL-DRSIYSDCVFASFLNDNGYISDNEY 108

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164
            ++LD L  +      P+  I LD  +     R++ R    E+    DY E+
Sbjct: 109 KIYLDLLDNMLEHSKKPELMIYLDCSIAEAENRIKKRNRSCETDISKDYLEK 160


>gi|325275524|ref|ZP_08141434.1| hypothetical protein G1E_19280 [Pseudomonas sp. TJI-51]
 gi|324099337|gb|EGB97273.1| hypothetical protein G1E_19280 [Pseudomonas sp. TJI-51]
          Length = 205

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 75/223 (33%), Gaps = 28/223 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN  LF+S +G +G GKTT +  + + L+   + V    E    P       ++     +
Sbjct: 1   MNRPLFVSLDGPKGTGKTTLLEAVTQALRLGGHKVVRLCERNNDPYRGDTMALVNRLARN 60

Query: 61  EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              A E E     A     +   + P    G I+L DR+  S  A+   R S     +  
Sbjct: 61  PCQALEHEVCQRFADSRAWISRNVLPRQPAGSIILIDRWYPSDAAF---RRSVPFAQILQ 117

Query: 120 LQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERK---DVMIHE 171
           L  +     +PD      T       +    R   R     S  +   + +         
Sbjct: 118 LN-LERGVQVPDLHVGVVT-----AAETSWARAAARTRGLRSTVIHTLDEQVACTEAFER 171

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              +    + RN+           + +  +  I+  ++ ++++
Sbjct: 172 AVAEQGWVLCRNE----------GTVEQASCQIVAEIYAVLRQ 204


>gi|75763791|ref|ZP_00743452.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74488722|gb|EAO52277.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 217

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 12  FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 63  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 122 TQDMPVPNVIVYLTASLETLQKRITLRGREFEKN 155


>gi|42779097|ref|NP_976344.1| deoxynucleoside kinase family protein [Bacillus cereus ATCC 10987]
 gi|52145194|ref|YP_081634.1| deoxyguanosine kinase [Bacillus cereus E33L]
 gi|206978344|ref|ZP_03239218.1| deoxynucleoside kinase family protein [Bacillus cereus H3081.97]
 gi|217957596|ref|YP_002336138.1| deoxynucleoside kinase family protein [Bacillus cereus AH187]
 gi|222093789|ref|YP_002527837.1| deoxyguanosine kinase [Bacillus cereus Q1]
 gi|228983275|ref|ZP_04143490.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229136863|ref|ZP_04265492.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST26]
 gi|229153799|ref|ZP_04281931.1| Deoxyguanosine kinase [Bacillus cereus ATCC 4342]
 gi|229194410|ref|ZP_04321215.1| Deoxyguanosine kinase [Bacillus cereus m1293]
 gi|42735012|gb|AAS38952.1| deoxynucleoside kinase family protein [Bacillus cereus ATCC 10987]
 gi|51978663|gb|AAU20213.1| deoxyguanosine kinase [Bacillus cereus E33L]
 gi|206743436|gb|EDZ54869.1| deoxynucleoside kinase family protein [Bacillus cereus H3081.97]
 gi|217063093|gb|ACJ77343.1| deoxynucleoside kinase family protein [Bacillus cereus AH187]
 gi|221237835|gb|ACM10545.1| deoxyguanosine kinase [Bacillus cereus Q1]
 gi|228589066|gb|EEK47079.1| Deoxyguanosine kinase [Bacillus cereus m1293]
 gi|228629668|gb|EEK86363.1| Deoxyguanosine kinase [Bacillus cereus ATCC 4342]
 gi|228646598|gb|EEL02803.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST26]
 gi|228776455|gb|EEM24806.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 211

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|330842896|ref|XP_003293404.1| hypothetical protein DICPUDRAFT_41960 [Dictyostelium purpureum]
 gi|325076274|gb|EGC30074.1| hypothetical protein DICPUDRAFT_41960 [Dictyostelium purpureum]
          Length = 280

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 55/167 (32%), Gaps = 18/167 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  EG   AGKT   S L   L    Y V    EP  T                    
Sbjct: 34  KIIILEGNISAGKTFLASKLGDIL---GYKVFF--EPTTTNP--FLESFYKDPKKYALIM 86

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---- 120
           +   +     R +   N ++ ++   + ++ DR + S + +         +  D      
Sbjct: 87  QLWLLN---QRYNTYLNALQYSIENDRGVILDRSVYSDWVFAENCRLEGLINEDGFKEYS 143

Query: 121 ---QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFE 163
              +       +P+ T+ LD+     L R+QNR    E S  L Y E
Sbjct: 144 RKREHFLSNIPIPNTTLYLDVNPKECLSRIQNRKRDCELSIPLSYLE 190


>gi|218895156|ref|YP_002443567.1| deoxynucleoside kinase family protein [Bacillus cereus G9842]
 gi|228905816|ref|ZP_04069715.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 200]
 gi|218544061|gb|ACK96455.1| deoxynucleoside kinase family protein [Bacillus cereus G9842]
 gi|228853824|gb|EEM98582.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 200]
          Length = 211

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIALRGREFEKN 149


>gi|158287505|ref|XP_309517.4| AGAP011130-PA [Anopheles gambiae str. PEST]
 gi|157019683|gb|EAA05289.4| AGAP011130-PA [Anopheles gambiae str. PEST]
          Length = 399

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 21/173 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           +  +G   AGK+     L   L+ K +           P     R +             
Sbjct: 80  VVVDGPIAAGKSAFAKELAAELEMKYFPEVTMDNYYINPYGYDMRQLDAKLPATMQSFDV 139

Query: 54  -LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---- 108
                      A +  +     R     + +      G+ ++ DR + S + +       
Sbjct: 140 TKFHQNPTHRNAASFQVRMLVERFSQYADALAHLFSTGEGVVLDRSVYSDFVFLEAMFRN 199

Query: 109 ---RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                 ++ ++ D ++      + P   I LD+PVD+  +R++ R +  E + 
Sbjct: 200 GYVSKGARSVYYDLVKNTFCDLMKPHLVIYLDVPVDVVKQRIKKRANPAEVSS 252


>gi|71894164|ref|YP_278272.1| hypothetical protein MS53_0141 [Mycoplasma synoviae 53]
 gi|71850952|gb|AAZ43561.1| conserved hypothetical protein [Mycoplasma synoviae 53]
          Length = 210

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 24/218 (11%)

Query: 7   ISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I+  G+  +GK+T    L   + +       +          E      L    +     
Sbjct: 3   IAISGMVASGKSTLTKKLHTEYFKN---SFMLKEYEEDDEVFEKLLKWKLEKKPNVVLPF 59

Query: 66  AEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLF-------L 117
              I+     ++ ++ + +  L +    +  DRF   S  +Q    ++           L
Sbjct: 60  EVYIM--DNHIEKMKKLYKEYLAKDNYYIFSDRF---SIEHQIFAITAFEKEPHKHKTYL 114

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI---HEKRR 174
           D +  I V EV+PD    LD+  +   KR   R    E   +D + +        H   +
Sbjct: 115 DVVNSIIVPEVLPDYIFYLDVTYETFEKRFLKRQYKSE---MDTYHKNKEAFKKLHTIYK 171

Query: 175 QIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211
           + F+++ +    + HIVD +      VA  + +++  L
Sbjct: 172 ENFVNLCKEFNLKYHIVDVNNLDENEVAQKVASLIQNL 209


>gi|65317482|ref|ZP_00390441.1| COG1428: Deoxynucleoside kinases [Bacillus anthracis str. A2012]
 gi|118475793|ref|YP_892944.1| deoxyguanosine kinase [Bacillus thuringiensis str. Al Hakam]
 gi|118415018|gb|ABK83437.1| deoxyguanosine kinase [Bacillus thuringiensis str. Al Hakam]
          Length = 217

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 12  FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 63  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   +R+  R    E  
Sbjct: 122 TQDMPVPNVIVYLTASLETLQRRIAMRGREFEKN 155


>gi|223940590|ref|ZP_03632435.1| thymidylate kinase-like protein [bacterium Ellin514]
 gi|223890743|gb|EEF57259.1| thymidylate kinase-like protein [bacterium Ellin514]
          Length = 426

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 41/218 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQR--------KNYDVHVTREPGG---TPAAEAARHVLLSCGV 59
           G +G+GK+T ++ L++ LQ                 ++  G    P  +  R +L     
Sbjct: 232 GSDGSGKSTLLANLEQLLQPCFRHQQTFHFRPAVFQKKKQGVITDPHGKPPRGLL----- 286

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +  +   + A         + P  +   +++ DR  D     Q          L +
Sbjct: 287 ---TSWLKVFYYFADHWAGWFLKVIPGKIRSTLIIFDRSFDDLLVDQKRYRLRGTSGLVA 343

Query: 120 LQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +    ++ ++P  D   +L  P  +  +R       +    L+  E++   + +      
Sbjct: 344 V----LRHLLPKADRVFVLSAPARVIHQR-------KPELPLEELEKQQSTLQQ------ 386

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +A N+  R  +V +  + + VA  +   V   +  R
Sbjct: 387 --LAANE-SRYALVSAEQTPEQVANAVCREVLLCLAAR 421


>gi|308158792|gb|EFO61357.1| Deoxynucleoside kinase [Giardia lamblia P15]
          Length = 251

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 28/194 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FIS  G+ GAGKTT    L    +   + V+   EP                    F  
Sbjct: 31  MFISISGLIGAGKTTLAEELA---KEMGFPVYY--EPVEDNI--YLEDFYKDMKTYGFPM 83

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQHLFLD 118
           +   +     R    + +I      G+  + DR  + D+ +A     QG      +    
Sbjct: 84  QVYLLN---KRYQQHQQIIW----SGEGAVQDRSIYEDAVFARILVKQGNMSKRDYKTYT 136

Query: 119 SL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            L   +S     P+  I LD+  +  L+R++ R    ES          +   +     +
Sbjct: 137 DLYNNMSKYLTHPNFLIHLDVTPEESLERIKERSRNCESGIP-------LSYLQDLYDEY 189

Query: 178 LDIARNQPDRCHIV 191
                    R  ++
Sbjct: 190 NIFLAEISKRIPVI 203


>gi|299133986|ref|ZP_07027179.1| hypothetical protein AfiDRAFT_2308 [Afipia sp. 1NLS2]
 gi|298590733|gb|EFI50935.1| hypothetical protein AfiDRAFT_2308 [Afipia sp. 1NLS2]
          Length = 510

 Score = 63.5 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 48/242 (19%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR--HVLL----- 55
            G+ ++  G++G+GK+T ++ +  +L  +   + +    G    +   R   ++L     
Sbjct: 285 GGMIVAIVGVDGSGKSTAVTTIHEWLGSEIDTIPMYFGTGDGRPSLLLRPFKMMLPLIAS 344

Query: 56  -------SCGVDEFGAEAEAIVFAAAR---LDHVENVIRPAL-------MEGKILLCDRF 98
                                +++         V    R  L         G I+L DR+
Sbjct: 345 ALKTRPKGASHGAMSHREPGFLYSVLLTVWALVVAREKRNKLVSARRGANRGLIVLTDRY 404

Query: 99  LDSSYAYQGERDSSQHLFL--DSLQEISV------QEVMPDCTIILDLPVDIGLKRVQNR 150
             +      +      +      L+ +        Q + PD  I L +  +  L R    
Sbjct: 405 PQNQTPSFNDGPLLNRVPRAPRWLRRLEASAYLLAQRLPPDLVIKLQVTPETALLR---E 461

Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             +  S   +       +  E R             R   +D+      V   I + +W+
Sbjct: 462 PDMDPSIVRERITTLRHLTFEAR-------------RVVTIDAEQPLPDVIRRIKSEIWD 508

Query: 211 LV 212
           L+
Sbjct: 509 LL 510


>gi|169616051|ref|XP_001801441.1| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15]
 gi|160703101|gb|EAT81696.2| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15]
          Length = 105

 Score = 63.1 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 11/99 (11%)

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+  ++  V    PD  + LD+  D   KR             + +E+K   + ++ R++
Sbjct: 3   LEWCRKPDVGLPRPDLCVFLDISADDAAKR--------GGYGTEKYEKK--EMQDRVREL 52

Query: 177 FLDIA-RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           F  +  R + +    +D+  S + V   + + V   +++
Sbjct: 53  FETLMGRKEGEDFVRIDAGASLEEVQKKVKHEVDRCIER 91


>gi|196000705|ref|XP_002110220.1| hypothetical protein TRIADDRAFT_53995 [Trichoplax adhaerens]
 gi|190586171|gb|EDV26224.1| hypothetical protein TRIADDRAFT_53995 [Trichoplax adhaerens]
          Length = 311

 Score = 63.1 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 62/192 (32%), Gaps = 37/192 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N+   IS EG  GAGKTT  + +   L    Y V    EP       A      S     
Sbjct: 34  NTAKIISVEGNIGAGKTTLANNIGEIL---GYKVFY--EPVNQNPYLA--KFYESPKDYA 86

Query: 62  FGAEAEA----IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------- 109
           F  +        +     L H        L  G+ ++ DR + S   +            
Sbjct: 87  FKLQLWIYRQRFLIYCNALQHY-------LSTGQGVILDRSVYSDRVFAKTGNNDGFISS 139

Query: 110 -DSSQHLFLDS--LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYF 162
            +  Q+  L    L  +    + P   + L +     L+RV+ R  + E     + L   
Sbjct: 140 TEYDQYELLRQQLLNRV----IPPHLLVYLHVSPTDCLERVRKRGRIYEKSISTSYLQKL 195

Query: 163 ERKDVMIHEKRR 174
           E +     E+ R
Sbjct: 196 EDEFDNFVEEMR 207


>gi|114332254|ref|YP_748476.1| deoxynucleoside kinase [Nitrosomonas eutropha C91]
 gi|114309268|gb|ABI60511.1| deoxynucleoside kinase [Nitrosomonas eutropha C91]
          Length = 214

 Score = 63.1 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 54/178 (30%), Gaps = 18/178 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  GAGKT+    +   L        +  +P   P  E             +  
Sbjct: 7   RYIVVEGPVGAGKTSLARNMATRLNCS----LMLEQPEANPFLEKFYE-----DTPRYAL 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122
             +       R             +   ++ D   +    +     S     L     ++
Sbjct: 58  STQLFFLLQRRHQLQLMRQENGFSQS--VVSDFLFEKGQLFAAVALSEPEHGLYRQICEQ 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF----ERKDVMIHEKRRQ 175
           + +    PD  I L +  ++ +KR++ R +  E     DY     ER     HE  R 
Sbjct: 116 MPLDAPAPDLVIYLQVSPEVLIKRIRQRGNTLEQNISEDYLRRLAERYMQFFHEYDRA 173


>gi|228898773|ref|ZP_04063057.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222]
 gi|228860865|gb|EEN05241.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222]
          Length = 211

 Score = 63.1 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRITLRGREFEKN 149


>gi|229170869|ref|ZP_04298474.1| Deoxyguanosine kinase [Bacillus cereus MM3]
 gi|228612604|gb|EEK69821.1| Deoxyguanosine kinase [Bacillus cereus MM3]
          Length = 211

 Score = 63.1 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKAISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   +E++    L + K ++ D  +  +  +     + ++   D    +  
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIF--ASRTLKNSQYDKYMQIYR 113

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           I  Q+  +P+  + L   ++    R+  R    E  
Sbjct: 114 ILTQDMPVPNVIVYLTASLETLQTRIAMRGREFEKN 149


>gi|229015422|ref|ZP_04172425.1| Deoxyguanosine kinase [Bacillus cereus AH1273]
 gi|229021627|ref|ZP_04178215.1| Deoxyguanosine kinase [Bacillus cereus AH1272]
 gi|228739673|gb|EEL90081.1| Deoxyguanosine kinase [Bacillus cereus AH1272]
 gi|228745864|gb|EEL95863.1| Deoxyguanosine kinase [Bacillus cereus AH1273]
          Length = 211

 Score = 63.1 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLDQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|167635088|ref|ZP_02393405.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0442]
 gi|170688921|ref|ZP_02880123.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0465]
 gi|254686608|ref|ZP_05150467.1| deoxyguanosine kinase [Bacillus anthracis str. CNEVA-9066]
 gi|254744202|ref|ZP_05201883.1| deoxyguanosine kinase [Bacillus anthracis str. Kruger B]
 gi|167529562|gb|EDR92312.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0442]
 gi|170667145|gb|EDT17906.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0465]
          Length = 211

 Score = 63.1 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   +R+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQRRIAMRGREFEKN 149


>gi|30260209|ref|NP_842586.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           Ames]
 gi|47525271|ref|YP_016620.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49183054|ref|YP_026306.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           Sterne]
 gi|49476693|ref|YP_034375.1| deoxyguanosine kinase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|165873230|ref|ZP_02217841.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0488]
 gi|170707564|ref|ZP_02898017.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0389]
 gi|177655685|ref|ZP_02937010.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0174]
 gi|190569333|ref|ZP_03022225.1| deoxynucleoside kinase family protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196036364|ref|ZP_03103761.1| deoxynucleoside kinase family protein [Bacillus cereus W]
 gi|196041975|ref|ZP_03109262.1| deoxynucleoside kinase family protein [Bacillus cereus NVH0597-99]
 gi|218901221|ref|YP_002449055.1| deoxynucleoside kinase family protein [Bacillus cereus AH820]
 gi|225862072|ref|YP_002747450.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB102]
 gi|227812693|ref|YP_002812702.1| deoxynucleoside kinase family protein [Bacillus anthracis str. CDC
           684]
 gi|228912758|ref|ZP_04076407.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228925273|ref|ZP_04088371.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931522|ref|ZP_04094430.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943826|ref|ZP_04106213.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229089152|ref|ZP_04220435.1| Deoxyguanosine kinase [Bacillus cereus Rock3-42]
 gi|229119682|ref|ZP_04248945.1| Deoxyguanosine kinase [Bacillus cereus 95/8201]
 gi|229602573|ref|YP_002864671.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0248]
 gi|254724161|ref|ZP_05185946.1| deoxyguanosine kinase [Bacillus anthracis str. A1055]
 gi|254737004|ref|ZP_05194709.1| deoxyguanosine kinase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751193|ref|ZP_05203232.1| deoxyguanosine kinase [Bacillus anthracis str. Vollum]
 gi|254761663|ref|ZP_05213681.1| deoxyguanosine kinase [Bacillus anthracis str. Australia 94]
 gi|301051756|ref|YP_003789967.1| deoxyguanosine kinase [Bacillus anthracis CI]
 gi|30253530|gb|AAP24072.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           Ames]
 gi|47500419|gb|AAT29095.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49176981|gb|AAT52357.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           Sterne]
 gi|49328249|gb|AAT58895.1| deoxyguanosine kinase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|164711028|gb|EDR16594.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0488]
 gi|170127560|gb|EDS96434.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0389]
 gi|172080025|gb|EDT65125.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0174]
 gi|190559555|gb|EDV13548.1| deoxynucleoside kinase family protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|195990994|gb|EDX54965.1| deoxynucleoside kinase family protein [Bacillus cereus W]
 gi|196027230|gb|EDX65850.1| deoxynucleoside kinase family protein [Bacillus cereus NVH0597-99]
 gi|218537695|gb|ACK90093.1| deoxynucleoside kinase family protein [Bacillus cereus AH820]
 gi|225789020|gb|ACO29237.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB102]
 gi|227007000|gb|ACP16743.1| deoxynucleoside kinase family protein [Bacillus anthracis str. CDC
           684]
 gi|228663773|gb|EEL19350.1| Deoxyguanosine kinase [Bacillus cereus 95/8201]
 gi|228694175|gb|EEL47855.1| Deoxyguanosine kinase [Bacillus cereus Rock3-42]
 gi|228815850|gb|EEM62084.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228828140|gb|EEM73866.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834387|gb|EEM79926.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846885|gb|EEM91888.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266981|gb|ACQ48618.1| deoxynucleoside kinase family protein [Bacillus anthracis str.
           A0248]
 gi|300373925|gb|ADK02829.1| deoxyguanosine kinase [Bacillus cereus biovar anthracis str. CI]
 gi|324324009|gb|ADY19269.1| deoxynucleoside kinase family protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 211

 Score = 63.1 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   +R+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQRRIAMRGREFEKN 149


>gi|229077292|ref|ZP_04209975.1| Deoxyguanosine kinase [Bacillus cereus Rock4-2]
 gi|228706015|gb|EEL58320.1| Deoxyguanosine kinase [Bacillus cereus Rock4-2]
          Length = 211

 Score = 63.1 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122
            E + F   R   +E++    L + K ++ D  +  +  +     + +    D    +  
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIF--ASRTLKDSQYDKYMQIYR 113

Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           I +Q+  +P+  + L   ++   KR+  R    E  
Sbjct: 114 ILIQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149


>gi|238788255|ref|ZP_04632049.1| hypothetical protein yfred0001_6980 [Yersinia frederiksenii ATCC
           33641]
 gi|238723501|gb|EEQ15147.1| hypothetical protein yfred0001_6980 [Yersinia frederiksenii ATCC
           33641]
          Length = 220

 Score = 62.7 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 56/164 (34%), Gaps = 27/164 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           M   LFIS +G +G GKTT +  + + L+  N  V    E    P           +  +
Sbjct: 1   MTPPLFISLDGPKGVGKTTLLEAITKELRADNKKVIRLCEKKSDPYRRETMALVNRLARN 60

Query: 57  CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
             +D      E   FA +R     HV     P    G I+L DR+  S  A+   R    
Sbjct: 61  PSLDLERQVCER--FADSRAWISRHVLTKQPP----GSIILMDRWYPSDAAF---RRMVP 111

Query: 114 HLFLDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS 152
              +  L  I     +PD      T       DI   R   R  
Sbjct: 112 FADILQLN-IERNVRVPDLHVGVVT-----APDISWARASARTR 149


>gi|185135884|ref|NP_001117091.1| thymidylate kinase [Salmo salar]
 gi|145320997|gb|ABP63530.1| thymidylate kinase [Salmo salar]
          Length = 415

 Score = 62.7 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 34/214 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++  GK+T    L   L        + + P    +   AR        D      
Sbjct: 222 IVIEGLDATGKSTLTESLTEAL-----GATLLKSPPQCLSPWRAR-------FDTEPPLI 269

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDSSQHLFLDSLQ 121
               +A         + + A      ++ DR+  S+ AY      G +  +       + 
Sbjct: 270 RRAFYALGNYLTAGQIGQEARQAP--VIVDRYWHSTAAYAIATAVGGKLGNLPQAGSEVY 327

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVM----IHEKRRQI 176
                 + P         V +     Q R    +    D   E +++       +K  + 
Sbjct: 328 GWPGDLLRP-------SLVLMLSLSSQERMRRLQVRGQDKTMEEEELEANHLFRQKVEEA 380

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  +    P  C  VD++ S   V   +L ++ E
Sbjct: 381 YQRV--GGPA-CITVDASPSPDQVLQQVLLLIRE 411


>gi|196047686|ref|ZP_03114890.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB108]
 gi|229182414|ref|ZP_04309667.1| Deoxyguanosine kinase [Bacillus cereus BGSC 6E1]
 gi|196021471|gb|EDX60174.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB108]
 gi|228601060|gb|EEK58627.1| Deoxyguanosine kinase [Bacillus cereus BGSC 6E1]
          Length = 211

 Score = 62.7 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   ++   +R+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLETLQRRIALRGREFEKN 149


>gi|83319354|ref|YP_424499.1| hypothetical protein MCAP_0527 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|83283240|gb|ABC01172.1| conserved hypothetical protein [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 214

 Score = 62.7 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 32/222 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT +  LK+ L +K   V+ T      P    A         D      
Sbjct: 3   IAIFGTTGAGKTTLLENLKKLLDKKYVFVNETS--LDCPYFNKAYD---DSNSDVQDYNY 57

Query: 67  EA-IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQHLFLDSLQE 122
           +  +     R   ++  I+      + ++ DR +  S  +               +  ++
Sbjct: 58  KLDLWMLTDR---MKTFIK--YKNHQNVIYDRSILDSMVFSQTDHMYNRLDDRDYNVFKD 112

Query: 123 ISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +  ++P            D  I L +     ++R+  R    E    D F       +
Sbjct: 113 YFLTCILPNIFDCQTNNKIFDIVIYLKVEPQKAIRRINKRSRDVELDTNDLFWLNLTKAY 172

Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211
           E    I+ ++    P    ++D+       +A  I N + ++
Sbjct: 173 EFWYDIYKEVI---P--FWVIDANVDDPNYIANMIANKIKDV 209


>gi|297480629|ref|XP_002691535.1| PREDICTED: UMP-CMP kinase 2-like [Bos taurus]
 gi|296482367|gb|DAA24482.1| UMP-CMP kinase 2-like [Bos taurus]
          Length = 447

 Score = 62.7 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 54/229 (23%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I  EG++  GKTT    +   L+     V +   P                  
Sbjct: 246 QKGRFPVIVIEGLDATGKTTVTQSVSDSLKA----VLLKSPPSCISQWRKI--------F 293

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LD 118
           D+         ++         + + +      ++ DR+  S+  Y    + S  L  L 
Sbjct: 294 DDEPTIIRRAFYSLGNYIVASEIAKESTKSP--VVVDRYWHSTATYAIATEVSGGLQHLP 351

Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160
            +     Q          D           +  +  ++R++ R   +       E+  + 
Sbjct: 352 PIHHPIYQWPR-------DLLKPDLILLLTVSPEERMQRIEGRGMEKTREEAELETNSI- 403

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +K    +  +    P  CH+VD++ S + V   +L+++ 
Sbjct: 404 --------FRQKVEVCYQRM--ENPG-CHVVDASPSREKVLQMVLSVIQ 441


>gi|159116708|ref|XP_001708575.1| Deoxynucleoside kinase [Giardia lamblia ATCC 50803]
 gi|157436687|gb|EDO80901.1| Deoxynucleoside kinase [Giardia lamblia ATCC 50803]
          Length = 251

 Score = 62.7 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 28/194 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FIS  G+ GAGKTT    L    +   + V+   EP                    F  
Sbjct: 31  MFISISGLIGAGKTTLAEELA---KEMGFPVYY--EPVEDNI--YLEDFYKDMKTYGFPM 83

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQHLFLD 118
           +   +     R    + +I      G+  + DR  + D+ +A     QG      +    
Sbjct: 84  QVYLLN---KRYQQHQQIIW----SGEGAVQDRSIYEDAVFARILVKQGNMSKRDYKTYT 136

Query: 119 SL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            L   +S     P+  I LD+  +  L+R++ R    E+          +   +     +
Sbjct: 137 DLYNNMSKYLTHPNFLIHLDVTPEESLERIKERSRNCEAGIP-------LSYLQDLYDEY 189

Query: 178 LDIARNQPDRCHIV 191
                    R  ++
Sbjct: 190 NIFLAEISKRIPVI 203


>gi|297460075|ref|XP_001252651.2| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Bos taurus]
          Length = 447

 Score = 62.7 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 54/229 (23%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I  EG++  GKTT    +   L+     V +   P                  
Sbjct: 246 QKGRFPVIVIEGLDATGKTTVTQSVSDSLKA----VLLKSPPSCISQWRKI--------F 293

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LD 118
           D+         ++         + + +      ++ DR+  S+  Y    + S  L  L 
Sbjct: 294 DDEPTIIRRAFYSLGNYIVASEIAKESTKSP--VVVDRYWHSTATYAIATEVSGGLQHLP 351

Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160
            +     Q          D           +  +  ++R++ R   +       E+  + 
Sbjct: 352 PIHHPIYQWPR-------DLLKPDLILLLTVSPEERMQRIEGRGMEKTREEAELETNSI- 403

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +K    +  +    P  CH+VD++ S + V   +L+++ 
Sbjct: 404 --------FRQKVEVCYQRM--ENPG-CHVVDASPSREKVLQMVLSVIQ 441


>gi|228963117|ref|ZP_04124288.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228796573|gb|EEM44010.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 178

 Score = 62.7 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 12/153 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           +    +P+  + L   ++   KR+  R    E 
Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIALRGREFEK 148


>gi|195112580|ref|XP_002000850.1| GI10455 [Drosophila mojavensis]
 gi|193917444|gb|EDW16311.1| GI10455 [Drosophila mojavensis]
          Length = 410

 Score = 62.4 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 28/228 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             I  EG   AGKT     L   L  + Y           P     R +           
Sbjct: 86  KVICVEGPIAAGKTKFAMELAAELDMQYYPAVDMDLIYINPYGYDMRKLDPELPPSCRSY 145

Query: 54  -LLSCGVDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---- 105
            + +   D     A A    ++      +V + ++  L  G+ ++ +R   S + +    
Sbjct: 146 DIKNFCADPKHPSAAAFQIRMYMLRFSQYV-DALQHILSTGQGVVTERSPFSDFVFMEAM 204

Query: 106 --QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
             QG          + +++ ++ E+  P   I LD+PVD+  K+++ R    E      F
Sbjct: 205 FRQGYISRGARSVYNDVRQNTIGELLKPHLVIYLDVPVDVVQKQIKARNLEHEVKSK-VF 263

Query: 163 ERKDVMIHEKRR-QIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
               +   E    Q +L       +   I D  +    + V  +I  I
Sbjct: 264 SNAYLTDLEVIYKQQYLKDIAGHAE-LLIYDWSAGGETEVVVEDIERI 310


>gi|297182349|gb|ADI18516.1| deoxynucleoside kinases [uncultured gamma proteobacterium
           HF4000_19M20]
          Length = 229

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 70/207 (33%), Gaps = 35/207 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EG  G GKTT   LL        Y++ + +       A+  +            A
Sbjct: 16  KFIAVEGPIGVGKTTLAQLLADSF---GYEIFLEKPAENPFLADFYK-------NPSKNA 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI---L-LCDRFL---DSSYAYQGERDSSQHLFL 117
            A  + F   R+  ++      L +  I   + + D FL   D  +A     D    L+ 
Sbjct: 66  LATQLFFLFQRVKQIQE-----LEQDDIFFPVRISD-FLLDKDKLFAKATLSDQELALYE 119

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFE--RKDV-MIHEK- 172
                +S+  + PD  I L         RV  R    E    LDY +   +       K 
Sbjct: 120 QIYSYLSLNLLTPDLVIYLQAESKTLFDRVIQRGVDIEKNITLDYLDILNESYKEFFLKY 179

Query: 173 -------RRQIFLDIARNQPDRCHIVD 192
                      FLD+  N+ D   I+D
Sbjct: 180 DRSPVLIVNSDFLDLVNNKNDYILILD 206


>gi|291238600|ref|XP_002739202.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,
           10-like [Saccoglossus kowalevskii]
          Length = 372

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 21/185 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAE-------AARH 52
             I  +G   AGKTT    L +     +    + D +  R+ G     +       +   
Sbjct: 77  KIIVIDGNIAAGKTTLGQKLAKELGMYYFPEASLD-YFDRQSGDGKRLDPKFTGNVSLER 135

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106
                  ++  +    +V    R     + +   L  G+ ++ DR + S + +       
Sbjct: 136 FYKDPKAEDGHSFRLQVVMYMIRYLTYCDAMNHLLTTGEGVILDRSVYSDFVFLEAITTA 195

Query: 107 GERDSSQHLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLD-YFER 164
           G      + +   L+ IS+  V+P    I LD P+D+  KR++ R    E    D Y E 
Sbjct: 196 GLIRKQCYDYYQELKGISLWRVLPPHLVIYLDAPLDVVKKRIKERGIPYEQTIDDSYLES 255

Query: 165 KDVMI 169
            D   
Sbjct: 256 IDRAY 260


>gi|149037468|gb|EDL91899.1| deoxythymidylate kinase (predicted), isoform CRA_a [Rattus
          norvegicus]
          Length = 80

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I  EG++ AGKTT    L   L    +   + R P  +          L    + 
Sbjct: 4  RRGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTE- 62

Query: 62 FGAEAEAIVFAAARLDHV 79
              +  ++F+A R + V
Sbjct: 63 LEDHSVHLLFSANRWEQV 80


>gi|145481693|ref|XP_001426869.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393946|emb|CAK59471.1| unnamed protein product [Paramecium tetraurelia]
          Length = 236

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 39/216 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDEFG 63
            IS EG  G+GK+T + L    +Q+K   +H   EP           +  LL     +  
Sbjct: 16  LISIEGNIGSGKSTLLKL----MQQKYPQMHYLPEPVNEWQQINGNPKLNLLGSFYQDPH 71

Query: 64  AEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRFLDS---SYAYQGERDSSQHL--- 115
             A  +   A   RL H + V+  A +   I+L +R + +    +A  G  +   +    
Sbjct: 72  RWAYTMQNYAFYSRLKHWKTVM--AYLNQSIILSERSIQADKEIFAKNGYINGLMNEMEF 129

Query: 116 -----FLDSL------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYF 162
                F D L      ++I+ Q       + L +  ++ L+R+  R    E   +  DY 
Sbjct: 130 AIYEQFYDWLVQEVFGKQIAKQ-----LIVYLQVNPNVCLERMLKRSRDEEKNSISKDYL 184

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198
               V IH++  + +L  A++Q  +  I++    F+
Sbjct: 185 ----VQIHQR-HEEWLINAKDQNQKVLILNGDKEFE 215


>gi|157819837|ref|NP_001101487.1| UMP-CMP kinase 2, mitochondrial [Rattus norvegicus]
 gi|149051032|gb|EDM03205.1| thymidylate kinase family LPS-inducible member (predicted) [Rattus
           norvegicus]
          Length = 417

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 72/225 (32%), Gaps = 40/225 (17%)

Query: 1   MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +  G F  I+ EG++  GKTT    +   LQ     V +   P             L   
Sbjct: 217 IQKGKFQVIAIEGLDATGKTTLTQSVSESLQA----VLLQSPPPCISQWRK-----LFDD 267

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FL 117
                  A    F +     V + I         ++ DR+  S+  Y    + S  L +L
Sbjct: 268 EPTIIRRA----FYSLGNYLVASEIAKQ-SAKFPVIVDRYWHSTATYAIATEVSGGLQYL 322

Query: 118 DSLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKD 166
                   Q          D           +  +  ++R+Q R   +     +  E   
Sbjct: 323 PPAHHPVYQWPR-------DLLKPDLVLLLTVNSEERVRRLQGRGQEKTKEEAE-LEVNS 374

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           V   +K    +  +    P  C +VD++ S ++V   +L ++   
Sbjct: 375 V-FRQKVEATYQRM--ENPS-CRLVDASPSRETVLQTVLQLIQRA 415


>gi|224048693|ref|XP_002196001.1| PREDICTED: similar to thymidylate kinase family LPS-inducible
           member [Taeniopygia guttata]
          Length = 241

 Score = 62.0 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 54/230 (23%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I FEG++  GKTT    +K  L        + R P    +             
Sbjct: 41  KKGSFPVIVFEGLDATGKTTVTQAVKDALNG-----ILLRSPPACISQWRTVF------D 89

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-LFLD 118
           DE      A  +AA        + + +      ++ DR+  S+ AY    ++      L 
Sbjct: 90  DEPTPIKRAF-YAAGNYILASEIAKASTQAP--VIIDRYWHSTAAYAIATETIGKVQDLP 146

Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160
            +Q+   Q          D           +  +  ++R+Q+R   +       E+  L 
Sbjct: 147 PVQDEVYQWPE-------DLLKPDLVLLLTVDPEERVRRLQHRGLEKTKEEAELEANSL- 198

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                     +   + +  +    P  C  VD++ S + V   +L ++ +
Sbjct: 199 --------FRQSVEESYKRMV--NP-VCQEVDASPSKEEVLKTVLQLIKK 237


>gi|297539333|ref|YP_003675102.1| deoxynucleoside kinase [Methylotenera sp. 301]
 gi|297258680|gb|ADI30525.1| deoxynucleoside kinase [Methylotenera sp. 301]
          Length = 215

 Score = 62.0 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 33/226 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G GKTT   +L                P      + A+   L          
Sbjct: 9   YIVVEGPIGCGKTTLAKMLADKFPVDYLSEKAEANPFLPRFYQDAQRYALPTQ------- 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123
              + F   R + ++++ +  +   K ++ D FL  D  +A     D    L+ +  Q +
Sbjct: 62  ---LFFLFQRANQMKDLSQRDMFA-KPIIADFFLEKDPIFARLNLDDEEYALYHNIYQHL 117

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            ++   PD  I L  P+D  ++R++ R    E                  R+    +A  
Sbjct: 118 QLKAPKPDLVIYLQTPIDALMERIEERSVTYEQDIP--------------REYIERLANA 163

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW-----ELVQKRVSPLSSKKD 224
             +  H  D++     V    LN++      EL+  R+  +  +++
Sbjct: 164 YSEFFHNYDAS-PVLIVNNEKLNVLKNEDALELLLNRIMQIKGQRE 208


>gi|326916472|ref|XP_003204531.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Meleagris
           gallopavo]
          Length = 267

 Score = 62.0 bits (150), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 68/237 (28%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  + FEG++  GKTT    +K  L      V +   P                  
Sbjct: 67  RKGEFPVVVFEGLDATGKTTVTQSVKDALGA----VLLRSPPVCISQWRTI-------FD 115

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E      A  +AA        + + +      ++ DR+  S+ AY    ++        
Sbjct: 116 EEPTPIRRAF-YAAGNYILASEIAKASTQAP--VIVDRYWHSTAAYTIATETDG------ 166

Query: 120 LQEISVQEVMPDCTIILD-------------------LPVDIGLKRVQNRYSLR------ 154
               ++Q + PD     D                   +  +   +R++ R   R      
Sbjct: 167 ----NIQNLPPDH----DAVYKWPEDLLKPDLVLLLTVNPEERARRLEGRGLERTKEEAE 218

Query: 155 -ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            E+  L           ++  + +  +    P  C  VD++ S + V   +L ++ +
Sbjct: 219 LEANSL---------FRQRIEESYRRMV--NPA-CQEVDASPSKEEVFKTVLQLIKK 263


>gi|312221623|emb|CBY01563.1| hypothetical protein [Leptosphaeria maculans]
          Length = 106

 Score = 62.0 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 33/106 (31%), Gaps = 31/106 (29%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------------------ 42
           M  G  I FEG++ AGK+T  + L   L+     V   R PG                  
Sbjct: 1   MPRGRLIVFEGLDRAGKSTQCAKLVADLRNDGRVVRHLRFPGMFSLAFIVGWQRKVDVWD 60

Query: 43  -----------GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLD 77
                       T   +     L   G  E       ++F+A R +
Sbjct: 61  FHGKKRKKECITTRIGQMIDSYL--SGQSEQEDHVIHLLFSANRWE 104


>gi|222152094|ref|YP_002561254.1| deoxypurine kinase homolog [Macrococcus caseolyticus JCSC5402]
 gi|222121223|dbj|BAH18558.1| deoxypurine kinase homolog [Macrococcus caseolyticus JCSC5402]
          Length = 199

 Score = 62.0 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 77/214 (35%), Gaps = 30/214 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+ EG  G GK++    L   L        V   P  +   E           D++  
Sbjct: 4   LFIAIEGPIGVGKSSLTKKLSATLNLTPIYEIVEENPFLSDFYEDI---------DKWSF 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123
           + E + F   R       +   L      + D  +  +  +     + +   + + + +I
Sbjct: 55  QTE-MFFLCNRY-----KVLTELSNDISAVSDYHILKNKVFANNTLNEKEYRMFEDIYDI 108

Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +EV  PD T+ L   +++  +R+Q R    ES   D +  K    + +  +     + 
Sbjct: 109 LTREVRNPDITVFLTADLEVLKQRIQLRNRDFESHIEDDYLIKLTEDYRRVYE-----SM 163

Query: 183 NQPDRCHIVDSA--------HSFQSVATNILNIV 208
               +  ++D++          ++ +   I +I+
Sbjct: 164 KHDHQTLLIDTSDMDFVNNAADYEHIVQQIKDII 197


>gi|194018056|ref|ZP_03056661.1| deoxyguanosine kinase [Bacillus pumilus ATCC 7061]
 gi|194010248|gb|EDW19825.1| deoxyguanosine kinase [Bacillus pumilus ATCC 7061]
          Length = 207

 Score = 62.0 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKTT  ++L +  Q       V   P      E          ++++  +
Sbjct: 6   FIAVEGPIGAGKTTLATMLAKEFQFPLVKEIVEENPFLDKFYE---------DMEQWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E + F   R   +E++    + + + ++ D  +  +  +     +     +D  ++I  
Sbjct: 57  LE-MFFLCNRFKQLESIQENYVNQQQPIVTDYHVYKNMIF--AERTLSKKHMDKYRKIYH 113

Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                   P+  I +   +   L+R+Q R    E  
Sbjct: 114 LLTDDLPKPNAIIYIKASLPTLLERIQMRGRSFEED 149


>gi|260828376|ref|XP_002609139.1| hypothetical protein BRAFLDRAFT_131374 [Branchiostoma floridae]
 gi|229294494|gb|EEN65149.1| hypothetical protein BRAFLDRAFT_131374 [Branchiostoma floridae]
          Length = 463

 Score = 62.0 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 63/230 (27%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++  GKTT    L + L            P         RH+      + F ++ 
Sbjct: 263 IVLEGLDATGKTTLTERLGKMLSA----------PVLQSPPLPIRHL-----REVFDSQP 307

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQ-----GERDSSQHLFL--- 117
           E I  A   L +    ++ A       ++ DRF  S+ AY      G  D SQ       
Sbjct: 308 ELIRRAYYTLGNYILAMQVAEEAQTHPVVIDRFWHSTTAYSIATEVGCGDESQLPPRGHS 367

Query: 118 ----------------DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
                             + E S                     R+  R   +    +  
Sbjct: 368 VYTWPSDLLKPQLALLLMVNETSRG------------------ARLAGRGMGKTEEEI-R 408

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            E+  ++  ++  + +L +    P    ++D++ S + V  + + ++ + 
Sbjct: 409 LEK-SLLFRKRLVEAYLRM--ENPG-LKVIDASGSKEEVFASTVQVLKDF 454


>gi|33391177|gb|AAQ17206.1| NADH-ubiquinone oxidoreductase 42 kDa subunit [Branchiostoma
           belcheri tsingtauense]
          Length = 368

 Score = 62.0 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 22/180 (12%)

Query: 12  IEG---AGKTTHISLLKRFLQRKNY---DVH-VTREPGGTPAAEA-------ARHVLLSC 57
           I+G    GKTT    L   L  K +   DVH   R  G     +              + 
Sbjct: 75  IDGNLAVGKTTLGKELGEKLGMKYFPEVDVHYFDRFEGDGSPMDKRFSGNVSLEDYYKNP 134

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--- 114
              +  +    +V    R       +   +  G+ ++ DR + S + +       ++   
Sbjct: 135 SDPDGHSIRFQMVMFMMRYFQFCEAMNHLIATGQGVILDRSVHSDFVFLEAMYKERYIKK 194

Query: 115 ---LFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169
               +   ++E  + +++P    I LD+P +   K+++ R    E    L Y E  D   
Sbjct: 195 HCYDYYYMVKEEVINKILPPHLVIYLDVPPEEVQKKIEKRGIEMEKDIPLSYLETLDDAY 254


>gi|320162237|ref|YP_004175462.1| deoxynucleoside kinase [Anaerolinea thermophila UNI-1]
 gi|319996091|dbj|BAJ64862.1| deoxynucleoside kinase [Anaerolinea thermophila UNI-1]
          Length = 218

 Score = 62.0 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 62/181 (34%), Gaps = 31/181 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGV 59
           M    +I+  G  G GK+T + LL   L             G  P  E  AR+  L    
Sbjct: 1   MKR--YITVAGNIGVGKSTLVKLLCAKL-------------GWQPFYEPEARNPYLPDFY 45

Query: 60  DEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERD 110
               A      + F A RL     +I   L  G  ++ DR +        ++   QG  +
Sbjct: 46  QNMAAWGFHSQVFFLANRLQIHRQII---LFPGS-VVQDRSVYEDAEIFAANLYRQGYLN 101

Query: 111 SSQHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVM 168
              +    +L + I      PD  I L    +  ++R+  R    E     +Y E  + +
Sbjct: 102 ERDYATYRALYQGIVEFLPPPDLVIYLRARPETLMERIAQRNREYERGISREYLEALNDL 161

Query: 169 I 169
            
Sbjct: 162 Y 162


>gi|270262671|ref|ZP_06190942.1| hypothetical protein SOD_c02920 [Serratia odorifera 4Rx13]
 gi|270043355|gb|EFA16448.1| hypothetical protein SOD_c02920 [Serratia odorifera 4Rx13]
          Length = 220

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 58/172 (33%), Gaps = 21/172 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59
           M+  LF+S +G +GAGKTT +  + + L+  N  V  +  +       E     L++   
Sbjct: 1   MSRQLFVSLDGPKGAGKTTLLEAITKVLRADNKKVVRLCEKKSDPYRGETM--ALVNKLA 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLF 116
                  E  V      D    + R  L +     I+L DR+  S  A+   R       
Sbjct: 59  RNPSQALELEV-CERFADSRAWISRHVLTKQPPDSIILMDRWYPSDAAF---RRMVPFAE 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +  L  I     MPD      T       +    R   R     S  +   E
Sbjct: 115 ILQLN-IERNVRMPDLHVGVVT-----APETSWARAAARPRGLSSTVIYKLE 160


>gi|322832365|ref|YP_004212392.1| hypothetical protein Rahaq_1645 [Rahnella sp. Y9602]
 gi|321167566|gb|ADW73265.1| hypothetical protein Rahaq_1645 [Rahnella sp. Y9602]
          Length = 205

 Score = 61.6 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 58/175 (33%), Gaps = 27/175 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           M+  LFIS +G +G GKTT +  + + L+  N  V    E    P           +  +
Sbjct: 1   MSRPLFISLDGPKGVGKTTLLEAMTKVLRADNKKVVRLCEKKSDPYRRETMALVNRLARN 60

Query: 57  CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
              D      E   FA +R     HV     P      I+L DR+  S  A+   R    
Sbjct: 61  PARDLELEVCER--FADSRAWISRHVLTKQPP----DSIILMDRWYPSEAAF---RRMVP 111

Query: 114 HLFLDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
              +  L  I     MPD      T       DI   R   R     S  +   E
Sbjct: 112 FAEILQLN-IERNVRMPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKLE 160


>gi|313498682|gb|ADR60048.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 205

 Score = 61.6 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 32/224 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           MN  LFISF+G +G GKTT +  + + L+     V    E    P          H+  S
Sbjct: 1   MNRPLFISFDGPKGTGKTTLLEAVTQALRLDGIKVIRLCERKNDPHRGETMALVNHLSRS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D      E   FA +R   +   + P      I+L DR+  S  A+   R +     
Sbjct: 61  PCQDLEFKVCER--FAESRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDK 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERK---DVM 168
           +  L  +     +PD      T       +    R   R     S  +   + +      
Sbjct: 115 ILRLN-LERNVQVPDLHVGVVT-----KPETSWARAAARTRGLGSTVIHNLDEQVACTEA 168

Query: 169 IHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211
                 +    + RN+      VD +      V   I  ++  L
Sbjct: 169 FERAVAEQGWVLCRNEG----TVDEATR---QVVREIQGVLRHL 205


>gi|194743064|ref|XP_001954020.1| GF18063 [Drosophila ananassae]
 gi|190627057|gb|EDV42581.1| GF18063 [Drosophila ananassae]
          Length = 407

 Score = 61.6 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 73/227 (32%), Gaps = 26/227 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             I  EG   AGKT     L   L  K Y                 R +           
Sbjct: 83  KVICVEGPIAAGKTKFAEELADELDMKYYPAVDLDLIFVNAYGYDMRQLDPQLPPSCRSY 142

Query: 54  ----LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---- 105
                L     +  A+ +  ++   R     + ++  L  G+ ++ +R   S + +    
Sbjct: 143 DVKNFLKDPNHDLAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAM 201

Query: 106 --QGERDSSQHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
             QG          + L+E    + + P   I LDLPVD   K+++ R    E     + 
Sbjct: 202 FRQGYLSRGARSVYNELRENTISELLKPHLVIYLDLPVDAVKKQIKARNIGYEVESKVFS 261

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
           +     + +  +Q +L       +   I D  +    + V  +I  I
Sbjct: 262 DAYLRDLEQLYKQQYLKDIATHAE-LLIYDWTAGGETEVVVEDIERI 307


>gi|114576207|ref|XP_515282.2| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 710

 Score = 61.6 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 54/228 (23%)

Query: 3   SGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G F  ++ EG++  GKTT    +   L+     V +   P      +  R +       
Sbjct: 510 KGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DDEP 560

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS 119
                A    ++         + + +      ++ DR+  S+  Y    + S  L  L  
Sbjct: 561 TIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLPP 615

Query: 120 LQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLDY 161
                 Q          D           +  +  L+R+Q R   +       E+  +  
Sbjct: 616 AHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV-- 666

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S + V   +L+++ 
Sbjct: 667 -------FRQKVEMSYQRM--ENPG-CHVVDASPSREKVLQTVLSLIQ 704


>gi|218232701|ref|YP_002364870.1| deoxynucleoside kinase family protein [Bacillus cereus B4264]
 gi|218160658|gb|ACK60650.1| deoxynucleoside kinase family protein [Bacillus cereus B4264]
          Length = 211

 Score = 61.6 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +   +Q       V   P      E           DE+  +
Sbjct: 6   FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123
            E + F   R   +E++    L + K ++ D  +  +  +     +DS    ++   + +
Sbjct: 57  TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +    +P+  + L   +    KR+  R    E  
Sbjct: 116 TQDMPVPNVIVYLTASLKTLQKRIAMRGREFEKN 149


>gi|226531794|ref|NP_001148127.1| UMP/CMP kinase1 [Zea mays]
 gi|195615994|gb|ACG29827.1| uridylate kinase [Zea mays]
          Length = 221

 Score = 61.6 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 43/219 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T  S + R      +      +         T      ++++    +     
Sbjct: 20  GGPGSGKGTQCSKIVRHF---GFTHLSAGDLLRQQVQSDTEHGAMIKNLMHEGKLVPSDI 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++ A              L  G     DRFL   +    E   +    +       
Sbjct: 77  IVRLLLTA-------------MLQSGN----DRFLVDGFPRNEENRRAYESII------- 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181
              + P+  + +D P +   +R+ +R   R+   +D   ++  + H+        +  + 
Sbjct: 113 --GIEPELVLFIDCPREELERRILHRDQGRDDDNVDTIRKRFQVFHDSTLPVVLYYDRM- 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
                +   VD A S  +V  ++  I  +L+  +V  L+
Sbjct: 170 ----GKVRRVDGAKSADAVFEDVKAIFTQLLTTQVHSLT 204


>gi|59808649|gb|AAH89425.1| CMPK2 protein [Homo sapiens]
          Length = 441

 Score = 61.6 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 74/230 (32%), Gaps = 54/230 (23%)

Query: 1   MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +  G F  ++ EG++  GKTT    +   L+     V +   P      +  R +     
Sbjct: 239 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DD 289

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-L 117
                  A    ++         + + +      ++ DR+  S+  Y    + S  L  L
Sbjct: 290 EPTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHL 344

Query: 118 DSLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACL 159
                   Q          D           +  +  L+R+Q R   +       E+  +
Sbjct: 345 PPAHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV 397

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                      +K    +  +    P  CH+VD++ S + V   +L+++ 
Sbjct: 398 ---------FRQKVEMSYQRM--ENPG-CHVVDASPSREKVLQTVLSLIQ 435


>gi|311899730|dbj|BAJ32138.1| hypothetical protein KSE_63790 [Kitasatospora setae KM-6054]
          Length = 213

 Score = 61.6 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 80/223 (35%), Gaps = 29/223 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+F++ +G+  +GK+T   L+   L      VH+  E  G P     R  +   G    
Sbjct: 15  RGVFVTLDGLSASGKSTVAPLVAARL----GGVHL--EDDGLPGFARMRAEV--DGAGVL 66

Query: 63  GAEAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            A     +      +H++    R  +  G+ ++ + +   + A             +   
Sbjct: 67  PARLHWWLM----ANHLKSERARGLVGSGRPVVVESYFPRTVATHRAMGQ------NWPV 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 + PD  ++L++   +  +R++ R +    +     E   V    +  + F    
Sbjct: 117 GYPAGALRPDAAVLLEVDESVRRERLRVRAAGGALSDWHRREEPRVAESVRVYRAF---- 172

Query: 182 RNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223
                    VD    + + VA  ++ +V E V++     +S +
Sbjct: 173 -----GLVPVDGTGRTPEQVAEAVVALVHERVRRNRPEGASSR 210


>gi|256424810|ref|YP_003125463.1| deoxynucleoside kinase [Chitinophaga pinensis DSM 2588]
 gi|256039718|gb|ACU63262.1| deoxynucleoside kinase [Chitinophaga pinensis DSM 2588]
          Length = 207

 Score = 61.6 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 19/190 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG  GAGKTT  + L      K         P      E             F  
Sbjct: 4   KYITIEGNIGAGKTTLANKLSAHFGAKLILEEFADNPFLPKFYEK-------PQQYAFPL 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQE- 122
           E   + F A R   ++++++   M   +++ D     S  +           L   L + 
Sbjct: 57  E---LFFMAERYKQLKDMLQMQDMFSNLVISDYLFIKSLLFAKINLKEDEYNLYQKLFDI 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+ Q + PD  I L+ PV    + +++R    E    D               +++   R
Sbjct: 114 INPQLIQPDLLIFLNAPVSKLQQNIKHRNRSYEQQIED-------QYLINVHDMYMQYIR 166

Query: 183 NQPDRCHIVD 192
             P R  ++D
Sbjct: 167 QHPVRVLMLD 176


>gi|317474272|ref|ZP_07933548.1| thymidylate kinase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909582|gb|EFV31260.1| thymidylate kinase [Bacteroides eggerthii 1_2_48FAA]
          Length = 211

 Score = 61.6 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 40/226 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCG---V 59
            +I   G++G+GKTT I+ LK  L+++   V     R    T  A  A   +L       
Sbjct: 3   KYIIISGVDGSGKTTVINSLKDKLEQQGKTVDYIWMRYNHYTVKAMNAFARILGLSVKVH 62

Query: 60  DEFGAEAEAIVF-------------AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
           ++ G   E  ++                     + V++   ++   ++CDR+++      
Sbjct: 63  NKMGNVWEHRLYKMPWFCKLYVWCSYLDNKIAQKKVMK---LKSDYVICDRWINDILIDL 119

Query: 107 GER-DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFER 164
           G     +  L     ++          TI+         + V  R      A LD   E 
Sbjct: 120 GAECRFNNILDSKWYKKFH--------TIL----PQNSYQFVVIRNY---QAILDCRIEN 164

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +       R  ++  +A N     ++VD++ + +     ++ I+ +
Sbjct: 165 QANPDFPYRFALYQKLAENTE--VNVVDNSRTIEESVEQVIRILNK 208


>gi|218295701|ref|ZP_03496497.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23]
 gi|218243860|gb|EED10387.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23]
          Length = 200

 Score = 61.6 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 27/218 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EG  G GKTT + LL   L  +     V   P      +  R          +  
Sbjct: 1   MYLAVEGPIGVGKTTLVRLLSEALGAEPLLEVVEENPFLPLFYQDRRR---------YAF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           + +     +          +P    G ++   L D   D  +A          L+L+  +
Sbjct: 52  KVQVFFLLSRFRQLAPLRQKPLF--GGVVADYLLD--KDPIFASLNLEGPEWDLYLELYR 107

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E++ +   PD T+ L  PV + L+R+  R    E          D    E   + +    
Sbjct: 108 ELAPKVPPPDLTVYLRAPVPVLLERIARRGRPFEQG-------MDPAYLEALSEAYERHF 160

Query: 182 RNQPDRCHIVDSAH---SFQSVATN-ILNIVWELVQKR 215
              P    ++++     S        ++ +V E + ++
Sbjct: 161 ARYPHPLLVLEADALDFSPTGPHREAVVALVREHLAQK 198


>gi|149918076|ref|ZP_01906569.1| hypothetical protein PPSIR1_41789 [Plesiocystis pacifica SIR-1]
 gi|149821081|gb|EDM80487.1| hypothetical protein PPSIR1_41789 [Plesiocystis pacifica SIR-1]
          Length = 174

 Score = 61.6 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 25/183 (13%)

Query: 42  GGTPAAEAARHVLLSCGVDEFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRF 98
             +      R  ++    D   A     +   FAA+R       I  AL  G+ ++ DR+
Sbjct: 3   TPSSTLRKLRPAIIDDLKDSQEARQLFYLSTVFAASRA------IERALTSGESIVIDRY 56

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
             S+ AY   R S+    +D+L+           T+ +D P+ I  KRVQ R +    + 
Sbjct: 57  FLSTQAYAEFRGSNLR--VDTLERRLTPAT---LTVYVDAPLAIRRKRVQTRGASPADSE 111

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQP---DRCHIVDS-AHSFQSVATNILNIVWELVQK 214
                R+      + R+  L I R +        ++DS  HS       +L  +   + +
Sbjct: 112 T--LTREADA---RLRE--LHIQRRELSVVGNFVVIDSDTHSIDECVERVLEALDTTLTQ 164

Query: 215 RVS 217
           R S
Sbjct: 165 RAS 167


>gi|126314359|ref|XP_001376325.1| PREDICTED: similar to ubiquitin specific proteinase 40 [Monodelphis
            domestica]
          Length = 1612

 Score = 61.6 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 24/176 (13%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFL--------------QRKNYDVHVTREPGGTPAA 47
            N    I+ EG    GK+     L   L              +       ++ E GG  + 
Sbjct: 1312 NKSKVITVEGNVCTGKSDLAKDLAEKLGLRHFPEADIHYAEKTSGDGSILSPELGGNCSL 1371

Query: 48   EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-- 105
            E           ++  +        A RL    + +   L  G+ ++ +R + S + +  
Sbjct: 1372 EKFYD---DPRSNDGNSYRLQSWLYANRLLQYSDALEHLLSTGQGVVLERSIFSDFVFME 1428

Query: 106  ----QGERDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
                QG          + ++ + + + + P   I +D+PV   LKR+Q +    E 
Sbjct: 1429 AMFKQGFIRKQCVEHYEEIKRLTAPEYLPPHLVIFIDMPVPEILKRIQEKGDPHEK 1484


>gi|9626826|ref|NP_041096.1| ORF5 [Ictalurid herpesvirus 1]
 gi|9626904|ref|NP_041174.1| ORF5 [Ictalurid herpesvirus 1]
 gi|125445|sp|P28855|KITH_ICHVA RecName: Full=Thymidine kinase
 gi|331215|gb|AAA88108.1| ORF5 [Ictalurid herpesvirus 1]
 gi|331292|gb|AAA88186.1| ORF5 [Ictalurid herpesvirus 1]
          Length = 228

 Score = 61.2 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 88/235 (37%), Gaps = 35/235 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL    EG  G GK+T +  L   +     +V    EP         ++ L    +    
Sbjct: 16  GLVFCVEGNIGCGKSTLVKALMERVAGSGVNVV--EEPVDQWVNHNGKNYL---ELSYTD 70

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS----YAYQGERDSSQHLFL-- 117
               A+ F     D   NV R  L      + +R   S+     A  G R       L  
Sbjct: 71  PTGYAVPFQNLVFDSYVNVQR--LQNPD--IMERSPMSATRVFCAVNGSRGVIPATALPG 126

Query: 118 ------DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIH 170
                   ++ I+ + V     + L+LP +  L+R++ R    E+   LDY      ++H
Sbjct: 127 MAARGEAVMRTIATRPVF----VYLELPPEECLRRMRRRDRTGEAGVGLDYL----RLLH 178

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           E+  + +L  A +       VD++ S + +   ++ I+     +  +PL+ K  +
Sbjct: 179 ER-YEAWLSSAED----VERVDASRSREEIVDRVIEILCRRHPRLRAPLTRKSQL 228


>gi|320156427|ref|YP_004188806.1| putative deoxyribonucleoside kinase [Vibrio vulnificus MO6-24/O]
 gi|319931739|gb|ADV86603.1| putative deoxyribonucleoside kinase [Vibrio vulnificus MO6-24/O]
          Length = 197

 Score = 61.2 bits (148), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 78/217 (35%), Gaps = 25/217 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG  GAGK+T +  L   L    ++V            +       S   ++F A
Sbjct: 1   MYIAIEGNIGAGKSTVLEPLAAKL---GFEVIHEGIETDKGFQDCLAAFYESNAKEDFDA 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               +  A  R + +       L   K  + +R L    A     ++       +LQ+  
Sbjct: 58  VQVYL--ANYRANLISK-----LDPNKNYIMERSLQ-GAALFCIAENHTDTATWTLQDF- 108

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA-- 181
                P   + LD P +I L+R+  R    E    LDY E        +  +   D A  
Sbjct: 109 KHVPQPLHYLYLDCPAEICLQRIAKRGRECEQTIPLDYLE--------RVEKAHKDWAYM 160

Query: 182 RNQPDRCHIVDSAHSF--QSVATNILNIVWELVQKRV 216
                   +VDS+      ++A +I  ++    + RV
Sbjct: 161 GEWAGIVSVVDSSGQINLDALAEHINKVIEVKTKPRV 197


>gi|157691305|ref|YP_001485767.1| deoxyguanosine kinase [Bacillus pumilus SAFR-032]
 gi|157680063|gb|ABV61207.1| deoxyguanosine kinase [Bacillus pumilus SAFR-032]
          Length = 207

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKTT  ++L +  Q       V   P      E          ++++  +
Sbjct: 6   FIAVEGPIGAGKTTLATMLAKEFQFPLVKEIVEENPFLDKFYE---------DMEQWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E + F   R   +E++    +   + ++ D  +  +  +     +     +D  ++I  
Sbjct: 57  LE-MFFLCNRFKQLESIQENYVNHQQPIVTDYHVYKNMIF--AERTLSKKHMDKYRKIYH 113

Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                   P+  I +   +   L+R+Q R    E  
Sbjct: 114 LLTDDLPKPNAIIYIKASLPTLLERIQMRGRSFEED 149


>gi|167033597|ref|YP_001668828.1| hypothetical protein PputGB1_2593 [Pseudomonas putida GB-1]
 gi|166860085|gb|ABY98492.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 213

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 21/161 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           MN  LF+S +G +G GKTT +  + + L+ +   V    E    P           +  S
Sbjct: 1   MNRPLFVSIDGPKGTGKTTLLEAVTQALRVEGKKVIRLCERNNDPYRRETMALVNQLARS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D      E   FAA+R   +   + P      I+L DR+  S  A+   R +     
Sbjct: 61  PCQDLEFRVCER--FAASRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDH 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS 152
           +  L  +     +PD      T       +    R   R  
Sbjct: 115 ILRLN-LERSVQVPDLHVGVVT-----APETSWARAAARTR 149


>gi|26990078|ref|NP_745503.1| hypothetical protein PP_3363 [Pseudomonas putida KT2440]
 gi|24985006|gb|AAN68967.1|AE016528_5 thymidylate kinase, putative [Pseudomonas putida KT2440]
          Length = 205

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 55/161 (34%), Gaps = 21/161 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           MN  LFISF+G +G GKTT +  + + L+     V    E    P           +  S
Sbjct: 1   MNRPLFISFDGPKGTGKTTLLEAVTQALRLDGNKVIRLCERKNDPHRGETMALVNQLSRS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D      E   FA +R   +   + P      I+L DR+  S  A+   R +     
Sbjct: 61  PCQDLEFKVCER--FAESRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDK 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS 152
           +  L  +     +PD      T       +    R   R  
Sbjct: 115 ILRLN-LERNVQVPDLHVGVVT-----TPETSWARAAARTR 149


>gi|117606370|ref|NP_997198.2| UMP-CMP kinase 2, mitochondrial precursor [Homo sapiens]
 gi|296439392|sp|Q5EBM0|CMPK2_HUMAN RecName: Full=UMP-CMP kinase 2, mitochondrial; Flags: Precursor
 gi|119621441|gb|EAX01036.1| hypothetical protein LOC129607, isoform CRA_a [Homo sapiens]
          Length = 449

 Score = 61.2 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 74/230 (32%), Gaps = 54/230 (23%)

Query: 1   MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +  G F  ++ EG++  GKTT    +   L+     V +   P      +  R +     
Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DD 297

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-L 117
                  A    ++         + + +      ++ DR+  S+  Y    + S  L  L
Sbjct: 298 EPTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHL 352

Query: 118 DSLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACL 159
                   Q          D           +  +  L+R+Q R   +       E+  +
Sbjct: 353 PPAHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV 405

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                      +K    +  +    P  CH+VD++ S + V   +L+++ 
Sbjct: 406 ---------FRQKVEMSYQRM--ENPG-CHVVDASPSREKVLQTVLSLIQ 443


>gi|239616711|ref|YP_002940033.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1]
 gi|239505542|gb|ACR79029.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1]
          Length = 204

 Score = 60.8 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 22/164 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I F G  G+GKTT    L   L    +++H        P  E       +     + 
Sbjct: 2   GKMIVFAGNVGSGKTTIARALADAL---GFEIHFES-VSDNPFLE---DFYHNQRKWAYH 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAYQGERDSSQ-----HL 115
            +   ++       H    ++ A+ +G  ++ DR +      +A                
Sbjct: 55  LQTFFLI-------HRFTALKEAMEKGSNIVFDRSIYEDAEIFARNLYETGKMEKREFET 107

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           +LD    +      PD  + +D  +D  L R++ R    E    
Sbjct: 108 YLDMFYSMIKYIPHPDLLVFIDADIDTILARIRKRGRNMELEVP 151


>gi|328778513|ref|XP_396785.4| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial [Apis mellifera]
          Length = 415

 Score = 60.8 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 21/175 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             I  +G    GKT     + +             E          R +           
Sbjct: 77  KLIVVDGPPAVGKTKLCEQIAKDFGFLYMPAPTHDEIFINYYGFDIRDLNPQLPESCRFY 136

Query: 54  -LLSCGVDEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
            L     + +     +  + F   R +   N +   L  G+ ++ +R + + YA+     
Sbjct: 137 DLKDFLRNPYYYRTASIQLGFFNMRFEQYMNALVHILATGQGVVLNRSIFTEYAFMDAMH 196

Query: 111 SSQHLFLDSLQEISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
            + +L   +++E  +         + P   I LD   +I  ++++ R ++ E   
Sbjct: 197 KAGYLSDLTVKEFEMMRKNSFKFLLRPHLVIYLDASPEIIQEKIKKRGNVDEINS 251


>gi|225077170|ref|ZP_03720369.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens
           NRL30031/H210]
 gi|224951518|gb|EEG32727.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens
           NRL30031/H210]
          Length = 211

 Score = 60.8 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 16/155 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   +I  EG  G+GKT     L            ++  P   P        + + G  
Sbjct: 1   MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117
                A  + F   R + V N+I     +G +++ D FL   D  +      D  Q LF 
Sbjct: 54  ----LAAELFFLTRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFA 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           D  Q I  Q V PD  I L   V+   KR+Q R+ 
Sbjct: 108 DMKQRILPQYVEPDVVIYLQTAVENNRKRLQKRHE 142


>gi|12963517|ref|NP_075625.1| thymidylate kinase isoform 2 [Mus musculus]
 gi|1836040|gb|AAB46837.1| thymidylate kinase [Mus sp.]
 gi|12848397|dbj|BAB27937.1| unnamed protein product [Mus musculus]
 gi|12859415|dbj|BAB31646.1| unnamed protein product [Mus musculus]
 gi|12859652|dbj|BAB31722.1| unnamed protein product [Mus musculus]
 gi|47124402|gb|AAH69902.1| Deoxythymidylate kinase [Mus musculus]
 gi|74141414|dbj|BAE35986.1| unnamed protein product [Mus musculus]
 gi|148707984|gb|EDL39931.1| deoxythymidylate kinase, isoform CRA_b [Mus musculus]
          Length = 80

 Score = 60.8 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I  EG++ AGKTT    L   L    +   + R P  +       +  L    + 
Sbjct: 4  RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTE- 62

Query: 62 FGAEAEAIVFAAARLDHV 79
              +  ++F+A R + V
Sbjct: 63 LEDHSVHLLFSANRWEQV 80


>gi|148547616|ref|YP_001267718.1| hypothetical protein Pput_2395 [Pseudomonas putida F1]
 gi|148511674|gb|ABQ78534.1| thymidylate kinase [Pseudomonas putida F1]
          Length = 205

 Score = 60.8 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 71/224 (31%), Gaps = 32/224 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           MN  LFIS +G +G GKTT +  + + L+     V    E    P           +  S
Sbjct: 1   MNRPLFISIDGPKGTGKTTLLEAVTQALRLDGNKVIRLCERKNDPHRGETMALVNQLSRS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D      E   FA +R   +   + P      I+L DR+  S  A+   R +     
Sbjct: 61  PCQDLEFKVCER--FAESRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDK 114

Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERK---DVM 168
           +  L  +     +PD      T       +    R   R     S  +   + +      
Sbjct: 115 ILRLN-LERNVQVPDLHVGVVT-----TPETSWARAAARTRGLGSTVIHNLDEQVACTEA 168

Query: 169 IHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211
                 +    + RN+      VD +      V   I  ++  L
Sbjct: 169 FERAVAEQGWVLCRNEG----TVDEATR---QVVREIQGVLRHL 205


>gi|253999872|ref|YP_003051935.1| deoxynucleoside kinase [Methylovorus sp. SIP3-4]
 gi|313201846|ref|YP_004040504.1| deoxynucleoside kinase [Methylovorus sp. MP688]
 gi|253986551|gb|ACT51408.1| deoxynucleoside kinase [Methylovorus sp. SIP3-4]
 gi|312441162|gb|ADQ85268.1| deoxynucleoside kinase [Methylovorus sp. MP688]
          Length = 215

 Score = 60.4 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 64/191 (33%), Gaps = 27/191 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G+GKTT    L          V++  E   +          L         +
Sbjct: 9   YIVIEGPIGSGKTTLARKLADKFS-----VNLLLENAESNPFLP--RFYLDAPRYALPTQ 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123
              + F   R + + ++ +  L  GK  + D FL  D  +A     D    L+    Q +
Sbjct: 62  ---LFFLFQRCEQIRDLSQRDLF-GKATIADFFLEKDPLFARMNLDDEEFALYRQIYQHL 117

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            VQ   PD  I L  PVD   +RV  R    E                  R+    +A  
Sbjct: 118 QVQVSTPDLVIYLQTPVDALAERVNQRNISYEQEIP--------------REYLKRLADA 163

Query: 184 QPDRCHIVDSA 194
             +  H  D+A
Sbjct: 164 YSEFFHQYDAA 174


>gi|157371350|ref|YP_001479339.1| hypothetical protein Spro_3111 [Serratia proteamaculans 568]
 gi|157323114|gb|ABV42211.1| conserved hypothetical protein [Serratia proteamaculans 568]
          Length = 205

 Score = 60.4 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 54/169 (31%), Gaps = 15/169 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59
           M+  LF++ +G +GAGKTT +  + + L+  N  V  +  +       E    V      
Sbjct: 1   MSRQLFVALDGPKGAGKTTLLEAITKGLRADNKKVIRLCEKKSDPYRGETMALVNKLARN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                E E     A     +   +        I+L DR+  S  A+   R       +  
Sbjct: 61  PTLDLELEVCKRFADSRAWISRHVLTKQPPDSIILMDRWYPSDAAF---RRMVPFAEILQ 117

Query: 120 LQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           L  I      PD      T       DI   R   R     S  +   E
Sbjct: 118 LN-IERNVRTPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKLE 160


>gi|104781815|ref|YP_608313.1| hypothetical protein PSEEN2729 [Pseudomonas entomophila L48]
 gi|95110802|emb|CAK15515.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 202

 Score = 60.4 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 11/136 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59
           MN  LFIS +G +G GKTT +  + R L+  N  V  +  +       E     L++  V
Sbjct: 1   MNRSLFISLDGPKGTGKTTLLESVTRALRADNRKVIRLCEKKSDPYRGETM--ALVNQFV 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLF 116
                + E  +           + +  L +   G I+L DR+  S  A+   R       
Sbjct: 59  RNPCRDLELSI-CKRFAQSRHWMSQHVLAKQPPGSIILIDRWYPSDAAF---RRLVSFAE 114

Query: 117 LDSLQEISVQEVMPDC 132
           +  L  I     +PD 
Sbjct: 115 ILRLN-IERNVRVPDL 129


>gi|308501733|ref|XP_003113051.1| CRE-NUO-4 protein [Caenorhabditis remanei]
 gi|308265352|gb|EFP09305.1| CRE-NUO-4 protein [Caenorhabditis remanei]
          Length = 436

 Score = 60.4 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 34/230 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGG---TPAAEAARHVLL 55
             I  EG  G+GKTT    L   L      + +  D+ + R         +   AR+ L 
Sbjct: 73  KLIVIEGNIGSGKTTLAKQLADQLGFVHIPEFRMDDILIDRYGNDLRNYYSKFPARYRLP 132

Query: 56  SCGVDEFGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
              +       E       R+     D   N +   L  G+ ++ +R   S + +     
Sbjct: 133 DMSMFYKNPRGELSAAMQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMR 192

Query: 111 SSQHL---------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
              ++         F+     +      P   + L+ P +  L+ ++ R +  E A +D 
Sbjct: 193 DKNYIGHEYFKHYYFVRK-NALPQLHFWPHLVVYLNTPTNKCLENIKRRGNTDEIAVVD- 250

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAHS--FQSVATNILNI 207
            ER      +   + + D  R   +   I+  D        +V  +I  +
Sbjct: 251 -ER----YLKTIEESYKDSLREYRNHSKILAYDWTKPGDTDAVVEDIERL 295


>gi|90023018|ref|YP_528845.1| DNA polymerase III, epsilon subunit [Saccharophagus degradans 2-40]
 gi|89952618|gb|ABD82633.1| deoxynucleoside kinase [Saccharophagus degradans 2-40]
          Length = 230

 Score = 60.4 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 28/178 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62
            FI+ EG  G GKTT    L +     NYD  + R  E    P   A          +  
Sbjct: 18  RFIAVEGPIGVGKTTLAKQLAQTF---NYDTLLERAEENPFLPRFYA---------NEHN 65

Query: 63  GAEAEAIVFAAARLDHV-----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            A    + F   R+  +     +++ +P  +   ++  DR     +A     + +  L+ 
Sbjct: 66  SALPTQLFFLFQRVQQINDLKQDDIFQPVRVADFLIDKDR----LFAEVTLDEEAMRLYD 121

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF----ERKDVMIH 170
                +++    PD  + L  P D+ ++R++ R    E A   +Y     E      H
Sbjct: 122 QVYNHMTINAPKPDLVVYLQAPEDVLVERIKKRGIQNEQAISPEYLHQLNEAYTRFFH 179


>gi|331703438|ref|YP_004400125.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801993|emb|CBW54147.1| Deoxynucleoside kinase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 212

 Score = 60.4 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 36/224 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEFGA 64
           I+  G  GAGKTT +  LK+ L      ++ T    P    A +     +          
Sbjct: 3   IAIFGTTGAGKTTLLENLKKLLDSSYIFINETSLDCPYFNKAYDDTNKNVQDYNYKLD-- 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL 120
               +     R   ++  I+    + + ++ DR +  S  +          S   + +  
Sbjct: 61  ----LWMLTDR---MKTFIK--YKDHQNVIYDRSILDSMVFSQTDHMYNRLSDTDY-NVF 110

Query: 121 QEISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           ++  +  ++P            D  I L +     ++R+  R    E    D F      
Sbjct: 111 KDYFLTCILPNIFDIKNNWKTFDVVIYLKVDPYKAIQRINKRSRDVELDTNDLFWLNLTN 170

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211
            +E    I+ ++    P    ++D+       +AT+I N++  +
Sbjct: 171 AYEFWYNIYKEVI---P--FWVIDANVDDPNYIATSIANMIKNI 209


>gi|297625036|ref|YP_003706470.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093]
 gi|297166216|gb|ADI15927.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093]
          Length = 209

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 13/174 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKT+   LL   L  +     V   P   P                F A+
Sbjct: 3   FIAVEGPIGAGKTSLSRLLAESLGAQLVLEVVEENPFLAPF-------YRDPERYAFSAQ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQ-EI 123
              ++   +R   V+ + + +L      + D   D    +        +    + L  ++
Sbjct: 56  TFFLL---SRFKQVQEMRQGSLFF-THTVADYLFDKDVIFASLNLRGDEWRLYEELYTQL 111

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +   PD T+ L    D+ L+R+  R    E      + +     +++  + +
Sbjct: 112 RPKLPEPDLTVYLRATPDLLLERIAKRARPFEQDLEAAYLQALGEAYDRYFERY 165


>gi|297172526|gb|ADI23497.1| deoxynucleoside kinases [uncultured gamma proteobacterium
           HF0770_40P16]
          Length = 229

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 65/202 (32%), Gaps = 27/202 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EG  G GKTT  +LL        Y+  + +        +  +            A
Sbjct: 16  KFIAVEGPIGVGKTTLANLLADSF---GYETFLEKPSANPFLGDFYKK-------PSQNA 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
            A  + F   R+  ++ + +  +     +  D FL   D  +A     D    L+     
Sbjct: 66  LATQLFFLFQRVKQIQELKQDDIFSPVKV-SD-FLVEKDKLFAKATLSDQELTLYEQIYN 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEK----- 172
            +S   + PD  I L        +R+  R    E       LD      +   +      
Sbjct: 124 YLSFDLITPDIVIYLQAKSKTLFERIMRRGIDIEKNITLKYLDILNESYLEFFQNYEKSP 183

Query: 173 ---RRQIFLDIARNQPDRCHIV 191
                  F+D+  N+ D   ++
Sbjct: 184 VLIVNSDFIDLVNNKKDYILLL 205


>gi|129560535|dbj|BAF48830.1| hypothetical protein [Cyprinid herpesvirus 3]
          Length = 293

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 37/238 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ EG  GAGK+T I  +K + +R+ ++V V  EP  +      +  LL     +     
Sbjct: 60  VAVEGNLGAGKSTFIEAMKEYAKRQRWEVMV--EPIDSWTDVCGKGNLLDRYYKDMPRWG 117

Query: 67  EAIVFAA--ARLDHVENVIR--PALMEGKIL-----LCDRFLDSSYAYQ-GERDSSQHLF 116
                 A  +RL     +    P L    ++       DRF+    A   G  D  +   
Sbjct: 118 YTFQSYAYQSRLQRQTELEMGLPMLGVDVVVYERSCFSDRFVFGEAARMSGNMDELEFAA 177

Query: 117 LDSLQEISVQEV-MP-DC--TIILDLPVDIGLKRVQNRYSLRESA-CLDYFE-----RKD 166
             +  +   + +  P D    I L       L+RV  R    ES+  ++Y        +D
Sbjct: 178 YSAAHKFFAEILQRPFDIHGVIYLRATPKTCLERVNKRSRSEESSVDMEYLTTIHKLHED 237

Query: 167 VMIHEKRRQIFLDIARNQPDRCHI------VDSAHSFQSVA--TNILNIVWELVQKRV 216
            ++H+K            P  C +      VD  ++ + VA    I   V   ++ +V
Sbjct: 238 WLMHKK------GPCEQYPSMCKVPVLVVNVD-EYNCEDVARRREIFAEVDAFIKDQV 288


>gi|254283056|ref|ZP_04958024.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR51-B]
 gi|219679259|gb|EED35608.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR51-B]
          Length = 227

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 23/193 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKTT  + L       NYDV +  +P   P  E               A 
Sbjct: 20  FIAVEGPIGVGKTTLANRLAGTF---NYDVLL-EDPQENPFLERFYQ------NPRQTAL 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121
           A  + F   R   ++++ +  + E   +   L D   D  +A     DS ++   + +  
Sbjct: 70  ATQLFFLFQRAQKIQDMRQQDIFEPVRVADFLID--KDPLFAR-VNLDSDEYQLYNKVYG 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++++    PD  I L   VD   +R+Q R    E     + +R+ +    +    F    
Sbjct: 127 QLTIDAPTPDLVIYLQASVDRLQERIQQRGLPAER----HIDREYLETLNEVYSEFFLYY 182

Query: 182 RNQPDRCHIVDSA 194
              P    I+++ 
Sbjct: 183 DAAP--LLIINAN 193


>gi|319637819|ref|ZP_07992585.1| deoxyguanosine kinase [Neisseria mucosa C102]
 gi|317400974|gb|EFV81629.1| deoxyguanosine kinase [Neisseria mucosa C102]
          Length = 211

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 58/155 (37%), Gaps = 16/155 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   +I  EG  G+GKT     L            ++  P   P        + + G  
Sbjct: 1   MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117
                A  + F   R + V N+I     +G +++ D FL   D  +      D  + LF 
Sbjct: 54  ----LAAELFFLTRRAESV-NIIEDHCAQGGMVVAD-FLPEKDRIFTPIVLNDDERQLFA 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           D  Q I  Q   PD  I L   V+   KR+Q R+ 
Sbjct: 108 DIKQRILPQYAEPDVVIYLQTAVENNRKRLQKRHE 142


>gi|332027605|gb|EGI67676.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial [Acromyrmex echinatior]
          Length = 342

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 23/174 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I  EG   AGK+   + L    +          E          R +             
Sbjct: 49  IVVEGPIAAGKSKVAAKLAEEFEMVYLPPPTFDEYYINEYGYDIRTLDDRLSVGSQSCDV 108

Query: 54  --LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----- 106
              L+          +   +   + D     +   L  G+ ++ +R   + Y +      
Sbjct: 109 QKFLTNPYHPNVPMFQFH-YFQFKFDQYITALLHLLSTGQGVVLNRSFYTDYVFAKAMTN 167

Query: 107 -GERDSSQHLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
            G   S    F + +  I+ +Q + P   I LDLPVD  +++++ R    E   
Sbjct: 168 AGYMRSEVLKFYNDIVNIAKLQMLRPHLIIYLDLPVDTVMEKIKKRGIPYEVNS 221


>gi|131840049|ref|YP_001096058.1| ORF19 [Cyprinid herpesvirus 3]
 gi|106006034|gb|ABF81799.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706624|gb|ABG42850.1| ORF19 [Cyprinid herpesvirus 3]
          Length = 241

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 37/238 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ EG  GAGK+T I  +K + +R+ ++V V  EP  +      +  LL     +     
Sbjct: 8   VAVEGNLGAGKSTFIEAMKEYAKRQRWEVMV--EPIDSWTDVCGKGNLLDRYYKDMPRWG 65

Query: 67  EAIVFAA--ARLDHVENVIR--PALMEGKIL-----LCDRFLDSSYAYQ-GERDSSQHLF 116
                 A  +RL     +    P L    ++       DRF+    A   G  D  +   
Sbjct: 66  YTFQSYAYQSRLQRQTELEMGLPMLGVDVVVYERSCFSDRFVFGEAARMSGNMDELEFAA 125

Query: 117 LDSLQEISVQEV-MP-DC--TIILDLPVDIGLKRVQNRYSLRESA-CLDYFE-----RKD 166
             +  +   + +  P D    I L       L+RV  R    ES+  ++Y        +D
Sbjct: 126 YSAAHKFFAEILQRPFDIHGVIYLRATPKTCLERVNKRSRSEESSVDMEYLTTIHKLHED 185

Query: 167 VMIHEKRRQIFLDIARNQPDRCHI------VDSAHSFQSVA--TNILNIVWELVQKRV 216
            ++H+K            P  C +      VD  ++ + VA    I   V   ++ +V
Sbjct: 186 WLMHKK------GPCEQYPSMCKVPVLVVNVD-EYNCEDVARRREIFAEVDAFIKDQV 236


>gi|327198711|emb|CCA61412.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
          Length = 187

 Score = 60.0 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 75/209 (35%), Gaps = 29/209 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I  EG  G GK++ +            +  V  EP           +        +  
Sbjct: 1   MYICIEGNIGCGKSSVLKAFAE------NNFVVFPEPLEKWT--LLEELYRDPEKYAYPF 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHLFLDSLQ 121
           + + ++          N     L    + + +R   +S   ++       SQ   LDS  
Sbjct: 53  QLQVVL-----SQIETNKAIRRLSRSCVKIMERSAWASKNVFSNVRNWSQSQIDVLDSCY 107

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI 180
           ++   +V+P+  I LDL   +  +R+  R    E    LDY  R D    E       ++
Sbjct: 108 DLI--DVVPEYYIYLDLDPRVCHQRIAQRNRFEERNISLDYLIRLDERYKE-------EL 158

Query: 181 ARNQPDRCHIVD-SAHSFQSVATNILNIV 208
           ++       ++D  + + + +  NI +I+
Sbjct: 159 SKL--KNTIVIDCGSMTTEQIVKNIRDIL 185


>gi|253997251|ref|YP_003049315.1| deoxynucleoside kinase [Methylotenera mobilis JLW8]
 gi|253983930|gb|ACT48788.1| deoxynucleoside kinase [Methylotenera mobilis JLW8]
          Length = 215

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 14/167 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G GKTT   +L                P      +             +G  
Sbjct: 9   YIVVEGPIGCGKTTLSKMLAEKFPVDYLSEKAEANPFLPRFYQ---------DAQRYGLP 59

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123
            + + F   R + ++ + +  +    I+  D FL  D  +A     D    L+    Q +
Sbjct: 60  TQ-LFFLFQRANQIKELSQRDMFAKPIV-ADFFLEKDPIFARLNLDDEEYALYHQIYQHL 117

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMI 169
            ++   PD  I L  P+D  ++R++ R    E     +Y ER     
Sbjct: 118 QLKAPKPDLVIYLQTPIDSLMERIEERSVSYEQDIPREYIERLSNAY 164


>gi|15605675|ref|NP_213050.1| adenylate kinase [Aquifex aeolicus VF5]
 gi|6225575|sp|O66490|KAD_AQUAE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|163310973|pdb|2RGX|A Chain A, Crystal Structure Of Adenylate Kinase From Aquifex
           Aeolicus In Complex With Ap5a
 gi|163310974|pdb|2RH5|A Chain A, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
 gi|163310975|pdb|2RH5|C Chain C, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
 gi|163310976|pdb|2RH5|B Chain B, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus
 gi|2982815|gb|AAC06438.1| adenylate kinase [Aquifex aeolicus VF5]
          Length = 206

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 81/231 (35%), Gaps = 52/231 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGV 59
           + + F G  GAGK T    L    + K +    T         +  R  +     L    
Sbjct: 1   MILVFLGPPGAGKGTQAKRLA---KEKGFVHIST--------GDILREAVQKGTPLGKKA 49

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            E+    E +       D +  +I     +   ++ D F          R   Q   LD 
Sbjct: 50  KEYMERGELVP-----DDLIIALIEEVFPKHGNVIFDGF---------PRTVKQAEALD- 94

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA------------CLDYFERKDV 167
            + +  + +  D  ++ ++P ++ ++R+  R    E+              +   +R+D 
Sbjct: 95  -EMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDD 153

Query: 168 --MIHEKRRQIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVWE 210
              + +KR +++ +    +      +    I+D++   + V   +L ++ +
Sbjct: 154 KPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIGD 204


>gi|331006240|ref|ZP_08329560.1| Deoxyadenosine kinase [gamma proteobacterium IMCC1989]
 gi|330419929|gb|EGG94275.1| Deoxyadenosine kinase [gamma proteobacterium IMCC1989]
          Length = 228

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 20/200 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKTT    L       NYD  +  +    P  E      LS  +      
Sbjct: 20  FIAVEGAIGAGKTTLAKRLAETF---NYDTLL-EKAEENPFLERFYQDRLSNALPTQ--- 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123
              + F   R   ++ + +  + +  + + D  +D    +         L +      ++
Sbjct: 73  ---LFFLFQRAQQIQELRQSDIFQP-VRVSDFLIDKDPLFAEVTLDKDELAIYQQVYNQL 128

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           ++    PD  + L  PV+  L R++ R    E       +   +    +    F      
Sbjct: 129 TIDAPKPDLVVYLQAPVNTLLHRIKTRGVNAEQT----IDNSYLETINEAYTRFFHFYDQ 184

Query: 184 QPDRCHIVDSAHSFQSVATN 203
            P    IV++      V  +
Sbjct: 185 SP--LLIVNAN-EIDWVNND 201


>gi|256384254|gb|ACU78824.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385087|gb|ACU79656.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455411|gb|ADH21646.1| deoxynucleoside kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 212

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 36/224 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEFGA 64
           I+  G  GAGKTT +  LK+ L      ++ T    P    A +     +          
Sbjct: 3   IAIFGTTGAGKTTLLENLKKLLDSSYVFINETSLDCPYFNKAYDDTNKNVQDYNYKLD-- 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL 120
               +     R   ++  I+    + + ++ DR +  S  +          S   + +  
Sbjct: 61  ----LWMLTDR---MKTFIK--YKDHQNVIYDRSILDSMVFSQTDHMYNRLSDTDY-NVF 110

Query: 121 QEISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           ++  +  ++P            D  I L +     ++R+  R    E    D F      
Sbjct: 111 KDYFLTCILPNIFDIKNNWKTFDVVIYLKVDPYKAIQRINKRSRDVELDTNDLFWLNLTN 170

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211
            +E    I+ ++    P    ++D+       +AT+I N++  +
Sbjct: 171 AYEFWYNIYKEVV---P--FWVIDANVDDPNYIATSIANMIKNI 209


>gi|261379860|ref|ZP_05984433.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703]
 gi|284797557|gb|EFC52904.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703]
          Length = 211

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 16/155 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   +I  EG  G+GKT     L            ++  P   P        + + G  
Sbjct: 1   MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117
                A  + F   R + V N+I     +G +++ D FL   D  +      D  Q LF 
Sbjct: 54  ----LAAELFFLMRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFA 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           D  Q I  Q   PD  I L   V+   KR+Q R+ 
Sbjct: 108 DMKQRILPQYAEPDVVIYLQTAVENNRKRLQKRHE 142


>gi|15078856|ref|NP_149606.1| 143R [Invertebrate iridescent virus 6]
 gi|82013396|sp|O55749|VF143_IIV6 RecName: Full=Putative kinase protein 143R
 gi|2738433|gb|AAB94460.1| 143R [Invertebrate iridescent virus 6]
          Length = 195

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 42/219 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  +GI GAGK+T    LK+ L           EP            LL    ++    A
Sbjct: 4   ICIDGIIGAGKSTVTHRLKKNL------YKCYEEPIDKWT-------LLPNLYNDMKKYA 50

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS----YAYQGERDSSQHLFLDSLQE 122
               F         +         + ++ +R   +S     +   E +      +D+   
Sbjct: 51  TPFQFQVLFSQ--YDQYLSFKDCKETVVVERCPWTSKNIFTSLMIENNLFDLSAIDTYNN 108

Query: 123 IS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--HEKRR 174
           +       V        I + +  ++  +R++ R         D F  +++     +   
Sbjct: 109 LYERLSYQVDHF-----IYIKVDSEMAFERIKKR---------DRFAEQNISFDYLKSLE 154

Query: 175 QIFLD-IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +   +A   P    I+D +++ + V  ++   +   +
Sbjct: 155 NKYATSLATLSPSTVTIIDGSNTIEEVEFDVKTAINNFL 193


>gi|195502459|ref|XP_002098233.1| GE10263 [Drosophila yakuba]
 gi|194184334|gb|EDW97945.1| GE10263 [Drosophila yakuba]
          Length = 407

 Score = 59.3 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 28/226 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54
           I  EG   AGK+     L   L  + Y                 R +             
Sbjct: 85  ICVEGPFAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144

Query: 55  ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
               L    D   A+ +  ++   R     + ++  L  G+ ++ +R   S + +     
Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAMF 202

Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            QG          + L++ ++ E+  P   I LDLPVD   K+++ R    E     + +
Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
                + +  +Q +L       +   I D  +    + V  +I  I
Sbjct: 263 AYLSDVEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307


>gi|325524979|gb|EGD02902.1| deoxyguanosine kinase [Burkholderia sp. TJI49]
          Length = 228

 Score = 59.3 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTTLARLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   + FA  R      +I  AL  G+ ++ D     +  +           L   + I+
Sbjct: 71  Q---LSFALQRAQQAGELI-GALDTGRPVVADFMPQKNDIFARLNLPEDEWQLY--RSIA 124

Query: 125 VQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                    +PD  + L    ++   R+Q R    E    D +
Sbjct: 125 THLDVPRAPVPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|110643225|ref|YP_670955.1| ATP-binding protein YghT [Escherichia coli 536]
 gi|110344817|gb|ABG71054.1| hypothetical ATP-binding protein YghT [Escherichia coli 536]
          Length = 230

 Score = 59.3 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 52/241 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAAR 51
            I+  G +G+GK+T    L   +++      VH+ ++ G            G    +   
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 52  HVLLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG 107
              +       G     ++  F A RL H  +++      G I+L DR+       AY G
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLHFRHML-ACRRRGLIVLTDRYPQDQIPGAYDG 126

Query: 108 ER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLR 154
                +     F+  L          ++     PD  I L++ +++   R     R SL 
Sbjct: 127 TVFPPNIEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLA 184

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               +       +            +          +D+    + V  +    + + +  
Sbjct: 185 RKIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLIDAEKAITDFMTA 226

Query: 215 R 215
           R
Sbjct: 227 R 227


>gi|155370536|ref|YP_001426070.1| hypothetical protein FR483_N438R [Paramecium bursaria Chlorella
           virus FR483]
 gi|155123856|gb|ABT15723.1| hypothetical protein FR483_N438R [Paramecium bursaria Chlorella
           virus FR483]
          Length = 187

 Score = 59.3 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 40/213 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ EG+ G+GK++ +      LQ++   V    EP      +       +        + 
Sbjct: 4   IAIEGLMGSGKSSVLR----ELQKRGIRVIA--EPTQDW--KYLDKFYGNRKKYALTLQI 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV- 125
           E ++                    ++++ +R    S +   +  SS+ +  D  ++++  
Sbjct: 56  EILLSF-----------LKYKFSDELVVVERSPQVSRSVFAKMLSSEGILSD--EDMATY 102

Query: 126 ----QEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                   P   D  I+LD P +I ++R  +R    +         + +   +K  +IF 
Sbjct: 103 VDIYDLAKPWKVDMYIVLDCPTEICIERAGSRGDSYKITP------EYMKDLKKYYEIFF 156

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                    C  V+S      V  N++ IV + 
Sbjct: 157 KYTD-----CKRVNSDRPLNDVVDNVMEIVSQA 184


>gi|294944735|ref|XP_002784404.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239897438|gb|EER16200.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 96

 Score = 59.3 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 86  ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145
            L  G+ ++CDR++ S  AY   + +      +  + + V    PD  + LD+  +   K
Sbjct: 7   HLAAGRHIVCDRYIFSVVAYTAMKVTVDF---EWCKSVDVGLPRPDMVMFLDISPEAAAK 63


>gi|196228061|ref|ZP_03126928.1| hypothetical protein CfE428DRAFT_0092 [Chthoniobacter flavus
           Ellin428]
 gi|196227464|gb|EDY21967.1| hypothetical protein CfE428DRAFT_0092 [Chthoniobacter flavus
           Ellin428]
          Length = 443

 Score = 59.3 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 15/179 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G +I F G +G GKTT  +LL    +   +    H    P   P             + +
Sbjct: 232 GRWIVFVGPDGVGKTTVATLLLAETKDFFRGARYHHWIPPWQKPLTSTVPASAPKPPLRD 291

Query: 62  FGAEAEAIVFAAAR------LDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
             A   A + +A R        H+     I P L+  ++++ DR+L +   Y  + +S +
Sbjct: 292 RPAGTGATISSALRLVRNVFRAHLAYCFRILPQLLRQRLVIGDRYLFN---YHLDPESVR 348

Query: 114 HLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIH 170
           +    S    +++    PD  + L    +   +R            +    E   +  H
Sbjct: 349 YYGPSSWVRFALRFVPKPDLVLCLVADPEEIHRRKPELSLDEIRRVISRGEELSSIGFH 407


>gi|271962255|ref|YP_003336451.1| hypothetical protein Sros_0685 [Streptosporangium roseum DSM 43021]
 gi|270505430|gb|ACZ83708.1| hypothetical protein Sros_0685 [Streptosporangium roseum DSM 43021]
          Length = 211

 Score = 59.3 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 75/221 (33%), Gaps = 34/221 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSC----GV 59
           +  G + AGK+T +  L+     +   V    +        A R +    +L      G 
Sbjct: 6   TLLGPDFAGKSTLLRQLRD---ERACQVVSYDDWCVAERFPAIRRLRREWVLDVYPRVGE 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +   A A A++    R  H+ + +  A  +   ++ D +         +      +   +
Sbjct: 63  EYSPAAAVAMLRPIVR--HLHDQVAGA-ADDIPVIVDSYYYKLLV---KCRLLGLVHERT 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--------VMIHE 171
             E       PD  I LDLP ++  +R Q        + L+ FE             +  
Sbjct: 117 FAEW-RALPQPDGVIYLDLPPEVAWERAQ------WGSRLNAFEHYGPVPGWEGFAELQS 169

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + R   ++     P    ++D+    ++VA     ++   V
Sbjct: 170 RMRPAIMEEIAGLP--LVVLDARAGQRTVAAEAGRVLASAV 208


>gi|195453208|ref|XP_002073687.1| GK14239 [Drosophila willistoni]
 gi|194169772|gb|EDW84673.1| GK14239 [Drosophila willistoni]
          Length = 412

 Score = 59.3 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 76/226 (33%), Gaps = 28/226 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------L 54
           I  EG   AGKT     L   L  + +           P     R +            +
Sbjct: 90  ICVEGPVAAGKTKFAKELAEELDMQYFPAVDMDLIYINPYGYDMRQLDAQMPPSCRSFDV 149

Query: 55  LSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106
            +   D     A          R     + ++     G+ ++ +R   S + +      Q
Sbjct: 150 KNFCQDPNHDLAALFQIRMYMLRYSQYIDALQHIFSTGQGVVLERSPHSDFVFMETMFRQ 209

Query: 107 GERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER- 164
           G          + +++ ++ E+  P   I LDLPVD   K++++R    E +   + E  
Sbjct: 210 GYISRGARSVYNEIRQNTLGELLKPHLVIYLDLPVDAVQKQIKSRNVDYEVSSKVFSEAY 269

Query: 165 -KDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
            +D+    K  Q +L    +  +   I D  +    + V  +I  I
Sbjct: 270 LRDLETLYK--QQYLKDISSHAE-LLIYDWTAGGETEVVVEDIERI 312


>gi|311893510|dbj|BAJ25918.1| hypothetical protein KSE_00660t [Kitasatospora setae KM-6054]
 gi|311900952|dbj|BAJ33360.1| hypothetical protein KSE_76080t [Kitasatospora setae KM-6054]
          Length = 211

 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 63/217 (29%), Gaps = 32/217 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLS--CGVDEF 62
           F    G + AGK++ +SLL+  +  +   V  T   P  T      R ++         +
Sbjct: 8   FCVLLGPDYAGKSSALSLLRDTVPWRTLSVDDTHLAPEHTLLTSLRRDLVREVAGRPGAW 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             +     F A  L      +R  L        + D +     A      +  H      
Sbjct: 68  SPD-----FLATMLQTAAVHLRDRLCADPHTPAVVDSYYYKLLAKGRLAGADDHAGFAWW 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE----RKDVMIHEKRRQI 176
           +        P   + LD+      +R        +   L+  E    +       +  Q 
Sbjct: 123 RTF----PQPRRVVYLDVRPATAWRR------SHDGRDLNRLEYYGPQPTADGFTR-YQG 171

Query: 177 FLDIARNQPDRCH-----IVDSAHSFQSVATNILNIV 208
             D+A+   D        ++D        A  I  ++
Sbjct: 172 --DLAKTMHDEIAHLPVTVIDGHGDPAQTAQAIRKVL 206


>gi|152980754|ref|YP_001354567.1| deoxyguanosine kinase [Janthinobacterium sp. Marseille]
 gi|151280831|gb|ABR89241.1| deoxyguanosine kinase [Janthinobacterium sp. Marseille]
          Length = 213

 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 20/175 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  GAGKTT    L   L  +     +   P   P  E                
Sbjct: 7   KYIVVEGAIGAGKTTLARKLAAQLGAQ----TLLELPEENPFLEKFYR---DAARYALPT 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   + F   R++ + ++ +P L + +I+   L D   D  +A     D    L+     
Sbjct: 60  Q---MFFLLQRMNQLRDLAQPDLFDARIVSDFLLD--KDPIFARLTLSDDELALYQQLYD 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----ERKDVMIHE 171
            +  Q  +PD  I L       + R++ R    E+   + +     E    + +E
Sbjct: 115 HLRPQAPLPDLVIYLQAEPQTLIDRIKKRGIPMEAGISENYMHRLCESYSRIFYE 169


>gi|147920512|ref|YP_685694.1| putative signal recognition particle [uncultured methanogenic
           archaeon RC-I]
 gi|110621090|emb|CAJ36368.1| putative signal recognition particle [uncultured methanogenic
           archaeon RC-I]
          Length = 377

 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G+ GAGKTT I+ L   L+ + Y V +    G T  A A     L    D  G + 
Sbjct: 184 ITFIGVNGAGKTTTIAKLGERLKEQGYGVVIAA--GDTFRAGAIEQ--LEKHADRLGIKM 239

Query: 67  EAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + ++ A    K I+L D            R  +    ++ L++I+ 
Sbjct: 240 IKHAQGADPAAVIYDAVQFAKNNKKDIVLAD---------TAGRLHTNINLMEQLRKIN- 289

Query: 126 QEVMPDCTIILD 137
           + V PD  I +D
Sbjct: 290 RVVKPDLVIFVD 301


>gi|88705694|ref|ZP_01103404.1| deoxypurine kinase [Congregibacter litoralis KT71]
 gi|88700207|gb|EAQ97316.1| deoxypurine kinase [Congregibacter litoralis KT71]
          Length = 221

 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GKTT    L      +     +  +    P  E               A 
Sbjct: 14  YIAVEGPIGVGKTTLTRRLAETFNHE----ILLEDAEQNPFLERFYR------NRSEAAL 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
           A  + F   R   ++ + +  L    + + D FL   D  +A          L+    Q+
Sbjct: 64  ATQLFFLFQRAQKMQELRQSELFSP-VRVAD-FLIEKDPLFARINLDSDEFELYEKVYQK 121

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +++    PD  I L  P D+ L+R++NR    E +    +
Sbjct: 122 LTIDAPRPDLVIYLQAPTDVLLERIENRGIGHEKSIDSRY 161


>gi|322510905|gb|ADX06218.1| putative deoxynucleoside kinase COG1428 [Organic Lake phycodnavirus
           2]
          Length = 206

 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 31/221 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62
             IS EG  G+GK+T +  LK+    +   +    EP        +     +L     + 
Sbjct: 2   KIISIEGNIGSGKSTFVEALKKHFHSE--SICFLDEPVELWNTIVDEHGKTMLENYYQDS 59

Query: 63  GAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118
              A +    A  +RL  ++  I     +  I++ +R  + D     Q   D      +D
Sbjct: 60  KKYAFSFQMMAYISRLSILKKAIDS--KKYDIIITERSLYTDKHVFCQMLYDDHTIQEMD 117

Query: 119 ------SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                    E ++   +P   + L     +   RV  R    E   L Y ER  +     
Sbjct: 118 YKIYNKWFDEFNMN--VPIHYVYLKTDPQVSYDRVIQRNRPGEIIPLSYLERCSL----- 170

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVA-TNILNIVWELV 212
               + DI     D    +D+     +      + I+ +++
Sbjct: 171 ----YHDIWLCNKD-IITIDAN--VDTSHTKEWVQIIEQMI 204


>gi|195330905|ref|XP_002032143.1| GM26394 [Drosophila sechellia]
 gi|194121086|gb|EDW43129.1| GM26394 [Drosophila sechellia]
          Length = 407

 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 28/228 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---------- 54
             I  EG   AGK+     L   L  + Y                 R +           
Sbjct: 83  KVICVEGPIAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSY 142

Query: 55  ------LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105
                 L    D   A+ +  ++   R     + ++  L  G+ ++ +R   S + +   
Sbjct: 143 DVRNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEA 200

Query: 106 ---QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
              QG          + L++ ++ E+  P   I LDLPVD   K+++ R    E     +
Sbjct: 201 MFRQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVF 260

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
            +     + +  +Q +L       +   I D  +    + V  +I  I
Sbjct: 261 SDAYLSDLEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307


>gi|221200984|ref|ZP_03574024.1| deoxynucleoside kinase family protein [Burkholderia multivorans
           CGD2M]
 gi|221206564|ref|ZP_03579577.1| deoxynucleoside kinase family protein [Burkholderia multivorans
           CGD2]
 gi|221214421|ref|ZP_03587392.1| deoxynucleoside kinase family protein [Burkholderia multivorans
           CGD1]
 gi|221165678|gb|EED98153.1| deoxynucleoside kinase family protein [Burkholderia multivorans
           CGD1]
 gi|221173873|gb|EEE06307.1| deoxynucleoside kinase family protein [Burkholderia multivorans
           CGD2]
 gi|221178834|gb|EEE11241.1| deoxynucleoside kinase family protein [Burkholderia multivorans
           CGD2M]
          Length = 228

 Score = 58.9 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTTLAQLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           +   + FA  R      +I  AL  G+ ++ D      +  Q     ++    +   ++ 
Sbjct: 71  Q---LSFALQRAQQAAELI-GALDTGRPVVAD------FMPQKNDIFARLNLPEDEWQLY 120

Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                   + +   PD  + L    ++   R+Q R    E    D +
Sbjct: 121 RSIAAHLEAPRAPAPDLVVYLQASPEVLFARIQKRGLPMELQIGDAY 167


>gi|124268201|ref|YP_001022205.1| deoxynucleoside kinase [Methylibium petroleiphilum PM1]
 gi|124260976|gb|ABM95970.1| deoxynucleoside kinase [Methylibium petroleiphilum PM1]
          Length = 246

 Score = 58.9 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 22/161 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPG--GTPAAEAARHVLLSCG 58
           +  EG  G GKTT    L         L++   + ++ R     GTP             
Sbjct: 12  VVVEGPIGVGKTTLARTLAAHWGARLVLEQPAENPYLARFYEHMGTPQGR--------GR 63

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHL 115
            +    + +   F   R++ ++ + +  + +   ++ D FL   D+ +A     D    L
Sbjct: 64  GNPLALQTQLS-FLFQRVEQMKELGQGGMFDHG-VVSD-FLFAKDAIFAMLTLGDEDLAL 120

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           +    +  S Q   PD  I L    D+ + R++ R    E 
Sbjct: 121 YRQIYKRHSAQAPQPDLVIWLQAEPDVLMARIRRRGIEMER 161


>gi|195572762|ref|XP_002104364.1| GD20916 [Drosophila simulans]
 gi|194200291|gb|EDX13867.1| GD20916 [Drosophila simulans]
          Length = 407

 Score = 58.5 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 28/226 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54
           I  EG   AGK+     L   L  + Y                 R +             
Sbjct: 85  ICVEGPIAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144

Query: 55  ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
               L    D   A+ +  ++   R     + ++  L  G+ ++ +R   S + +     
Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAMF 202

Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            QG          + L++ ++ E+  P   I LDLPVD   K+++ R    E     + +
Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
                + +  +Q +L       +   I D  +    + V  +I  I
Sbjct: 263 AYLSDLEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307


>gi|260878751|ref|ZP_05891106.1| deoxynucleoside kinase family protein [Vibrio parahaemolyticus
           AN-5034]
 gi|308091062|gb|EFO40757.1| deoxynucleoside kinase family protein [Vibrio parahaemolyticus
           AN-5034]
          Length = 197

 Score = 58.5 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 83/221 (37%), Gaps = 33/221 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+ EG  GAGK+T +  L   L    Y+V            +       S   ++F A
Sbjct: 1   MYIAIEGNIGAGKSTVLEPLAALL---GYEVIHEGIETDKGFQDCLAAFYESGSKEDFNA 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                V+ A         I   L   K  + +R L  +  +    + +           +
Sbjct: 58  ---LQVYLAN----YRANIIKNLDPTKNYIMERSLQGAVLFCLAENHTDTAT------WT 104

Query: 125 VQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ-IFL 178
           +Q+      P   + LD P +I L+R+  R    E +  LDY +R +       R   ++
Sbjct: 105 LQDFKHVEQPTHYLFLDCPAEICLERIAKRQRECEQSLPLDYLKRVEKAH----RDWGYM 160

Query: 179 -DIARNQPDRCHIVDSAH--SFQSVATNILNIVWELVQKRV 216
            + A        +VDS+     +++A ++  +V     +RV
Sbjct: 161 GEWAGQ----VTVVDSSGYVDLEALAEHVKTVVKIKAGERV 197


>gi|301307897|ref|ZP_07213853.1| hypothetical protein HMPREF9008_03638 [Bacteroides sp. 20_3]
 gi|300834240|gb|EFK64854.1| hypothetical protein HMPREF9008_03638 [Bacteroides sp. 20_3]
          Length = 212

 Score = 58.5 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 71/221 (32%), Gaps = 32/221 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62
            +I   G++G+GKTT I  ++  L+ +   V            +    +  L      E 
Sbjct: 3   KYIIISGVDGSGKTTVIEGVRAQLEAEGKTVGYIWMRYHHKLIKIMHAIAKLTGLSKKEN 62

Query: 63  GAEAEAIVFAAARL------DHVENVIRPALMEGK-------ILLCDRFLDSSYAYQGER 109
            A  E  +    +           + I   L   K        ++CDR+++      G  
Sbjct: 63  TAMGEMWLHYFYKSPLFCWFYLYSSYIDSWLARKKPTKLRTDYVICDRWVNDIIIDMGSE 122

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVM 168
             +  +      ++  + +            +   + V +R       C    E   +  
Sbjct: 123 THNLDILDGKWYKLYQRLL-----------PNDSFQFVISRNREDVLNC--RIENTFNEA 169

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
              + R ++  IA+  P+    +D+  S +   + ++  + 
Sbjct: 170 FDYRFR-LYQKIAQK-PEVIK-IDNTGSIEKSVSLVIESIR 207


>gi|157134045|ref|XP_001663120.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Aedes aegypti]
 gi|94469044|gb|ABF18371.1| mitochondrial NADH-ubiquinone oxidoreductase [Aedes aegypti]
 gi|108870616|gb|EAT34841.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Aedes aegypti]
          Length = 407

 Score = 58.5 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 25/175 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           +  +G   AGK+     L   L+ K +                 R +             
Sbjct: 88  VVVDGPIAAGKSAFAKELATELEMKYFPEATMDNYYINSYGYDLRKLDPQLPPSMQSFDV 147

Query: 54  ---LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-- 108
              L +            ++    R     + +      G+ ++ DR + S + +     
Sbjct: 148 SKFLQNPNDKNVATFQIRMLM--QRYSQYIDALAHLFSTGEGVVLDRCVYSDFVFVEAMF 205

Query: 109 -----RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                   ++ ++ D ++    + + P   I LD+PV +   R++ R +  E   
Sbjct: 206 KNGYMSKGARSVYYDLVKNTFSELMKPHLVIYLDVPVSVVKDRIKKRGNPAEVNS 260


>gi|198283565|ref|YP_002219886.1| deoxynucleoside kinase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666294|ref|YP_002426191.1| deoxyguanosine kinase/deoxyadenosine kinase, putative
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248086|gb|ACH83679.1| deoxynucleoside kinase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518507|gb|ACK79093.1| deoxyguanosine kinase/deoxyadenosine kinase, putative
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 203

 Score = 58.5 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 69/222 (31%), Gaps = 33/222 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S   IS EG  GAGKT+    L + L  +       + P  +   +     L      
Sbjct: 1   MTSPRIISIEGPMGAGKTSLARQLAQSLGGRMILEAPAQNPFLSRFYQGPGAAL------ 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
                 E   F   R             +   L+ D        +     D+ +H   + 
Sbjct: 55  ----ATELQFFMQRREQ------WRHRDDSSWLISDHSARKDEIFTPLTLDAEEHHLFNE 104

Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
           L+        P D  I LD P+ + +KR++ R    E A   DY          + +  +
Sbjct: 105 LRMALDFHPAPADLMIFLDAPLAVLMKRIRARGDAYEQALAPDYL--------ARVQAAY 156

Query: 178 LDIARNQPDRCHIVDSAHSFQSVA-----TNILNIVWELVQK 214
                N       VDSA     V        +++ V   ++ 
Sbjct: 157 RAWQANYALPRMNVDSAQ-VDFVHDPRHTERLIDAVRHRLKD 197


>gi|157162466|ref|YP_001459784.1| hypothetical protein EcHS_A3166 [Escherichia coli HS]
 gi|188495312|ref|ZP_03002582.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|193062168|ref|ZP_03043264.1| conserved hypothetical protein [Escherichia coli E22]
 gi|194426247|ref|ZP_03058802.1| conserved hypothetical protein [Escherichia coli B171]
 gi|260845746|ref|YP_003223524.1| hypothetical protein ECO103_3670 [Escherichia coli O103:H2 str.
           12009]
 gi|157068146|gb|ABV07401.1| conserved hypothetical protein [Escherichia coli HS]
 gi|188490511|gb|EDU65614.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|192932388|gb|EDV84986.1| conserved hypothetical protein [Escherichia coli E22]
 gi|194415555|gb|EDX31822.1| conserved hypothetical protein [Escherichia coli B171]
 gi|257760893|dbj|BAI32390.1| conserved hypothetical protein [Escherichia coli O103:H2 str.
           12009]
          Length = 230

 Score = 58.5 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  ++   + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDVEKAITDFMTAR 227


>gi|289548521|ref|YP_003473509.1| adenylate kinase [Thermocrinis albus DSM 14484]
 gi|289182138|gb|ADC89382.1| adenylate kinase [Thermocrinis albus DSM 14484]
          Length = 213

 Score = 58.5 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 59/238 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    L      +   VH+          +  R  + +       A
Sbjct: 1   MILVFLGPPGAGKGTQAKRLVE----ERRFVHLA-------TGDLLRSAVRNMTPLGMKA 49

Query: 65  EAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +         R        V  +I  AL +   ++ D F          R   Q   L+ 
Sbjct: 50  KE-----YMDRGDLVPDQLVIQMIEEALPQEGDVILDGF---------PRTIPQAQALE- 94

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY---- 161
              +S      D  I  D+   + ++R+  R                 +E    D     
Sbjct: 95  -NMLSSHGKKVDKVIFFDVEDSVLIERLTGRRVCPNCGAVYHIKYNPPKEDEICDRCGTK 153

Query: 162 -FERKDV--MIHEKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             +R+D       +R +++            + ++  I+D++     V  +IL  + +
Sbjct: 154 LIQREDDREDTVRRRLEVYRTQTAPLVDFYQKRNKLIILDASKPQDEVYASILKAIED 211


>gi|256821578|ref|YP_003145541.1| deoxynucleoside kinase [Kangiella koreensis DSM 16069]
 gi|256795117|gb|ACV25773.1| deoxynucleoside kinase [Kangiella koreensis DSM 16069]
          Length = 217

 Score = 58.5 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 17/155 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKTT    L   L        +  +    P  E                +
Sbjct: 11  FIAVEGPIGVGKTTLARRLSEALSSD----LILEQAEENPFLE---RFYQDPKSGALPTQ 63

Query: 66  AEAIVFAAARLDHVEN--VIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDSLQE 122
              +     +L  V    +  P  +   ++  DR F  S+       D  +    + + +
Sbjct: 64  LYFLFQRVRQLQEVRQSDMFSPVRVADYLMEKDRLFARSTL------DQDELRLYEQVYQ 117

Query: 123 -ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
            +++    PD  I L   V + L+R++ R    ES
Sbjct: 118 NLTIDAPKPDLVIYLQASVPVLLERIKKRGRASES 152


>gi|261326659|emb|CBH09621.1| adenylate kinase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 260

 Score = 58.5 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 59/241 (24%)

Query: 1   MNSGL----FISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARH 52
           M  G+    FI+  G  G+GK T    +   L            +TR            H
Sbjct: 44  MRRGIPLQIFIA--GPAGSGKRTQCKNIADRLGVVLISSGQ--VLTRGVESGSETSQLAH 99

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
             +S G      +    +    RL   +   +  L+EG                  R++ 
Sbjct: 100 SYVSRGERV--PDTLVSMIMKDRLSQSDACEKGWLVEGY----------------PRNAQ 141

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY----SLRESACLD-------- 160
           Q   ++         V+P   I+LDLP D+  +R+++R     + +E   LD        
Sbjct: 142 QAQAVEEC------GVIPQVFILLDLPEDLSFRRLEHRRYDPATNKEYHMLDNPPPAEDV 195

Query: 161 ----YFERKDVMIHE----KRRQIFLDI---ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                  ++D   HE    +  Q +  I    ++      +VD+  S + V  +IL  V 
Sbjct: 196 ALCERLVQRDADFHESIAKRLAQYYESIEGVKKHLGAVIEVVDARKSVEDVERDILAAVE 255

Query: 210 E 210
           +
Sbjct: 256 K 256


>gi|225454048|ref|XP_002263322.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744838|emb|CBI38106.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score = 58.1 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 49/209 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + + +      Y            A +  R  + S   +          
Sbjct: 29  GGPGSGKGTQCANIVKHF---GY--------THLSAGDLLRAEIKSGSENG--------- 68

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFL--DSSYAYQGERDSSQHLFLDSLQ 121
                     N+I+  + EGKI+       L  R +  DS+  +  +          + +
Sbjct: 69  ----------NMIQSMIKEGKIVPSEVTIKLLQRAILEDSNDKFLIDGFPRNEENRAAFE 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178
             +V ++ P+  +  D   +   +R+ NR   RE   ++   ++  +  E      + + 
Sbjct: 119 --AVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVIEYY- 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207
                   +   +D+A S + V   +  +
Sbjct: 176 ----ESKGKVRKIDAAQSIEEVFEAVKAV 200


>gi|88191971|pdb|2A2Z|A Chain A, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine And Uridine Diphosphate
 gi|88191972|pdb|2A2Z|B Chain B, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine And Uridine Diphosphate
 gi|88191973|pdb|2A2Z|C Chain C, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine And Uridine Diphosphate
 gi|88191974|pdb|2A2Z|D Chain D, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine And Uridine Diphosphate
 gi|88191975|pdb|2A30|A Chain A, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine
 gi|88191976|pdb|2A30|B Chain B, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine
 gi|88191977|pdb|2A30|C Chain C, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine
 gi|88191978|pdb|2A30|D Chain D, Crystal Structure Of Human Deoxycytidine Kinase In Complex
           With Deoxycytidine
          Length = 248

 Score = 58.1 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 29/227 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE----F 62
           IS EG   AGK+T +++LK+  +   ++V    EP        + +VL           F
Sbjct: 27  ISIEGNIAAGKSTFVNILKQLCED--WEVVP--EPVARWCNVQSTNVLQMMYEKPERWSF 82

Query: 63  GAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +  A + +  R         +++  +P L   + +  DR++ +S  Y+ E  +     
Sbjct: 83  TFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWT 141

Query: 117 L-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-----K 165
           +     D +     Q +  D  I L    +  L R+  R    E    L+Y E+     +
Sbjct: 142 IYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHE 201

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 SWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 245


>gi|167586237|ref|ZP_02378625.1| deoxynucleoside kinase [Burkholderia ubonensis Bu]
          Length = 228

 Score = 58.1 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 46/161 (28%), Gaps = 14/161 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTTLARLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   + FA  R      +   AL  G+ ++ D     +  +           L       
Sbjct: 71  Q---LAFALQRAQQAREL-NAALDTGRPVVADFMPQKNEIFARLNLPEDEWQLYRALAAH 126

Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           V       PD  + L    ++   R+Q R    E    D +
Sbjct: 127 VDAPRASAPDLVVYLQASPEVLFARIQKRGLPMELQISDAY 167


>gi|158314644|ref|YP_001507152.1| thymidylate kinase-like protein [Frankia sp. EAN1pec]
 gi|158110049|gb|ABW12246.1| Thymidylate kinase-like protein [Frankia sp. EAN1pec]
          Length = 204

 Score = 58.1 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 45/209 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ EG   +GKTT    L  + + +   V    EP           +++    + F  E 
Sbjct: 8   VAIEGTHASGKTTLTHALAAYYRERGVHVACVPEPARNSP--FIEEIVVHGRGE-FDLET 64

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E  +FAA     + + +R A  +  +++CD+ + +  AY                     
Sbjct: 65  EVDLFAA----QLSSQLRVA-RQHTMVICDKTVANVLAYAWLVLPGGPDG---------- 109

Query: 127 EVMPDCTIILDLPVDIGLK---RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              P        PV   ++   R           C D F++               +   
Sbjct: 110 ---PH------APVLHAMETFCRAWAHVYDAVFYCCDRFDQ---------------LQAG 145

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
            P R  ++D   +   V  +I   V + +
Sbjct: 146 DPYRSKVLDIQPAADRVVRSICATVGQRI 174


>gi|161525798|ref|YP_001580810.1| deoxynucleoside kinase [Burkholderia multivorans ATCC 17616]
 gi|189349481|ref|YP_001945109.1| deoxyguanosine kinase [Burkholderia multivorans ATCC 17616]
 gi|160343227|gb|ABX16313.1| deoxynucleoside kinase [Burkholderia multivorans ATCC 17616]
 gi|189333503|dbj|BAG42573.1| deoxyguanosine kinase [Burkholderia multivorans ATCC 17616]
          Length = 228

 Score = 58.1 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTTLARLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           +   + FA  R      +I  AL  G+ ++ D      +  Q     ++    +   ++ 
Sbjct: 71  Q---LSFALQRAQQSAELI-GALDTGRPVVAD------FMPQKNDIFARLNLPEDEWQLY 120

Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                   + +   PD  + L    ++   R+Q R    E    D +
Sbjct: 121 RSIAAHLEAPRAPAPDLVVYLQASPEVLFARIQKRGLPMELQISDAY 167


>gi|150024501|ref|YP_001295327.1| bifunctional 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
           diphosphokinase/deoxynucleoside kinase [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771042|emb|CAL42509.1| Probable bifunctional protein :
           2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
           diphosphokinase and deoxynucleoside kinase
           [Flavobacterium psychrophilum JIP02/86]
          Length = 380

 Score = 58.1 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 77/220 (35%), Gaps = 28/220 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKTT  + + +    K         P                    F  E
Sbjct: 180 YIAIEGNIGAGKTTLTTKIAQDFNAKTVLERFADNPFLP-------KFYKDQNRYAFPLE 232

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124
                F A R   + + +    +    ++ D  +  S  +           L  +L +I 
Sbjct: 233 MS---FLADRYQQLSDDLSQFDLFKDFVVTDYHIFKSLIFAKVTLQEDEFRLYKTLFDII 289

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDIAR 182
            +E   PD  + L    D  L+ ++ R           +E++ +    EK    +LD  +
Sbjct: 290 YKEMTKPDLYVYLYQNTDRLLQNIKKRGRS--------YEQEIEAEYLEKINHGYLDYIK 341

Query: 183 NQPD-RCHIVDSAHSFQSVATN-----ILNIVWELVQKRV 216
           +Q D    ++D +  F  V        IL+I+ E +  ++
Sbjct: 342 SQTDLNVLVIDVS-DFDFVEKQEDYVKILDIIQEKLDLQI 380


>gi|161019168|ref|NP_001104312.1| thymidylate kinase [Gallus gallus]
 gi|53126198|emb|CAG30937.1| hypothetical protein RCJMB04_1b4 [Gallus gallus]
          Length = 170

 Score = 58.1 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
           G  I  EG++ AGK+T    L + LQ   +   + R PG
Sbjct: 5  RGALIVLEGMDRAGKSTQCRRLVQALQAAGHRADLLRFPG 44


>gi|225719692|gb|ACO15692.1| Deoxynucleoside kinase [Caligus clemensi]
          Length = 225

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 33/214 (15%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI   EG  G+GK+T +     + + K  +V +  EP  +       ++L          
Sbjct: 12  FIVAVEGNVGSGKSTMLR----YFKSKG-EVRIYPEPVDSWRNVGGENLL---NNLYKDP 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY------QGERDSSQHLFL 117
           +  +  F +        ++     EG + + +R + S+ + +      +G     +   L
Sbjct: 64  QRCSFTFQSYVQLTRLKILEDVSTEGGVKIIERSIQSNDFVFLKTAQKRGTLSDVELQVL 123

Query: 118 DSLQEISVQEVM--P-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEK- 172
           DS         +  P D  + L    ++   R+  R    E    LDY +     +H+  
Sbjct: 124 DSYHSWIRNSTITNPIDLIVYLRTTPEVAHARLCKRARSEEKTVPLDYLQ----DLHDSY 179

Query: 173 ----RRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202
                R+++       P    ++D+  S   V  
Sbjct: 180 EDWLMRKVY----GQPPAPVLVIDANQSLSMVEK 209


>gi|225708974|gb|ACO10333.1| Thymidine kinase 2, mitochondrial precursor [Caligus rogercresseyi]
          Length = 290

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 84/234 (35%), Gaps = 40/234 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LS-CGV 59
           N    I+ EGI G GKTT +  +K +            EP           +L L+    
Sbjct: 62  NKPFIINVEGIVGTGKTTFLDYMKEYPYMDILP-----EPINKWTNLNGTDLLGLAFENP 116

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHL- 115
             +    E+ V      +H+    RP    G + + +R   S+   ++ Q          
Sbjct: 117 SRWSMTQESYVQLTLTEEHL----RPY---GIVKIMERSPHSAISVFSRQFYEAGQMTEV 169

Query: 116 FLDSLQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER----- 164
             + L           ++  D TI L L  ++  KRV  R  + E    L++ +R     
Sbjct: 170 EFNVLNAWYNFLNDKLDLTTDLTIYLRLDPELAYKRVLERGRIEEKNLSLNFLKRLHRLH 229

Query: 165 KDVMIHEKRRQIFLDIARNQP-DRCHIVDSAHSFQS---VATNILNIVWELVQK 214
            D +IH+    ++L      P     ++D++        +  ++   +W+ + K
Sbjct: 230 DDWLIHQNT-SMYL------PTGNILVIDTSRPLDEMEMIYKHLGKKIWKEIPK 276


>gi|170698321|ref|ZP_02889396.1| deoxynucleoside kinase [Burkholderia ambifaria IOP40-10]
 gi|171320260|ref|ZP_02909316.1| deoxynucleoside kinase [Burkholderia ambifaria MEX-5]
 gi|170136740|gb|EDT04993.1| deoxynucleoside kinase [Burkholderia ambifaria IOP40-10]
 gi|171094489|gb|EDT39547.1| deoxynucleoside kinase [Burkholderia ambifaria MEX-5]
          Length = 228

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 49/164 (29%), Gaps = 20/164 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E               A
Sbjct: 18  RYLVIEGPIGVGKTTLARLLGERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123
           +   + FA  R      +I  AL  G+ ++ D               +       L   I
Sbjct: 71  Q---LSFALQRAQQARELI-GALDTGRPVVAD---YMPQKNDIFARLNLPEDEWQLYRSI 123

Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +      Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 124 ATHLDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|71894163|ref|YP_278271.1| deoxyguanosine kinase [Mycoplasma synoviae 53]
 gi|71850951|gb|AAZ43560.1| deoxyguanosine kinase [Mycoplasma synoviae 53]
          Length = 217

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 79/222 (35%), Gaps = 26/222 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63
           + ++  G+  +GK+T +  L    +     +++                 L    +    
Sbjct: 1   MIVAVSGMISSGKSTLVKKLNSHYENN--SLYLDEYKKDDEIFSTMLRWFLEKRENINLS 58

Query: 64  AEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSS-----QHL 115
            +   +      ++ ++ +      +      L  DRF  + +A   + D       +  
Sbjct: 59  FDLYVLNH---HIESLKEIYEEFNEKFTKDDYLFLDRF-PAEHAIFNKMDLVTNLNHKLA 114

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----KDVMIH 170
           +  +L  + V ++ PD  + LD+       R+  R    E   +D FE      K++ + 
Sbjct: 115 YDKALDNLLVNQIKPDLVLYLDIDFKTFQNRLTQRSRSEE---VDNFENNIDYWKNLHMF 171

Query: 171 EKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWEL 211
            K  Q FL++ +    +  I+D+       V T  ++++   
Sbjct: 172 YK--QYFLELCKKYQIKYQIIDTNNLDEGQVLTKAISLIETF 211


>gi|268573866|ref|XP_002641910.1| C. briggsae CBR-NUO-4 protein [Caenorhabditis briggsae]
 gi|187026391|emb|CAP34527.1| CBR-NUO-4 protein [Caenorhabditis briggsae AF16]
          Length = 436

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 75/230 (32%), Gaps = 34/230 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGG---TPAAEAARHVLL 55
             I  EG  G+GKTT    L   L      + +  D+ + R         +   AR+ L 
Sbjct: 73  KLIVIEGNIGSGKTTLAKQLADQLGFVHFPEFRMDDILIDRYGNDLRNYYSKFPARYRLP 132

Query: 56  SCGVDEFGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
              +       E       R+     D   N +   L  G+ ++ +R   S + +     
Sbjct: 133 DISMFYKNPSGELSAAMQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMR 192

Query: 111 SSQHL---------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
              ++         F+     +      P   + L+ P    L+ ++ R +  E A +D 
Sbjct: 193 DKNYIGHEYFKHYYFVRK-NALPQLHFWPHLVVYLNTPTSKCLENIKRRGNTDEIATVD- 250

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAHS--FQSVATNILNI 207
            ER      +   + + D  R   +   I+  D        +V  +I  +
Sbjct: 251 -ER----YLKTIEESYKDSLREYRNHSKILAYDWTKPGDTDAVVEDIERL 295


>gi|312382540|gb|EFR27963.1| hypothetical protein AND_04737 [Anopheles darlingi]
          Length = 395

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 25/175 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           +  +G   AGK+     L   L+ K +           P     R +             
Sbjct: 76  VVVDGPIAAGKSAFAKELASELEMKYFPEPTMDNYYVNPYGYDLRQLDPKLPETMRSFDV 135

Query: 54  ---LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-- 108
              L              ++    R     + +      G+ ++ DR + S + +     
Sbjct: 136 AKFLQDPTHRNVATFQVRMLVE--RFSQYIDALAHLFSTGEGVVLDRSVYSDFVFLEAMF 193

Query: 109 -----RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                   ++ ++ D ++      + P   I LD+PV++   R++ R    E   
Sbjct: 194 RNGYISKGARSVYYDLVKNTFCDLMKPHLVIYLDVPVNVVKDRIKKRSHPAEVGS 248


>gi|74318070|ref|YP_315810.1| deoxynucleoside kinase [Thiobacillus denitrificans ATCC 25259]
 gi|74057565|gb|AAZ98005.1| deoxynucleoside kinase [Thiobacillus denitrificans ATCC 25259]
          Length = 213

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 61/199 (30%), Gaps = 41/199 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            +I  EG  GAGKT+    L         L+    +  + R        E  R+ L    
Sbjct: 7   RYIVVEGPIGAGKTSLTHKLAERLGADLLLENAGDNPFLPRFYQ-----EPRRYAL---- 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                      +F   R   + ++ +  L     +  D  +D    +           L 
Sbjct: 58  -----PTQLHFLF--DRSRQLRDLGQGDLFRSGTV-SDFLIDKDMLFARLNLDDDEFELY 109

Query: 119 S--LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                +++ Q   PD  I L  P +   +RV+ R                +         
Sbjct: 110 QKVYADLAPQAATPDLVIYLQAPTETLHERVRRR---------------GIDFERGMDAA 154

Query: 177 FLD-IARNQPDRCHIVDSA 194
           +L+ +A +  +  H  D+A
Sbjct: 155 YLERLANSYSEFFHRYDAA 173


>gi|241758681|ref|ZP_04756795.1| deoxyguanosine kinase [Neisseria flavescens SK114]
 gi|241321192|gb|EER57388.1| deoxyguanosine kinase [Neisseria flavescens SK114]
          Length = 211

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 16/155 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   +I  EG  G+GKT     L            ++  P   P        + + G  
Sbjct: 1   MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117
                A  + F   R + V N+I     +G +++ D FL   D  +      D  Q LF 
Sbjct: 54  ----LAAELFFLTRRAESV-NIIDDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFA 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           D  Q I  Q   PD  I L   V+   KR+Q R+ 
Sbjct: 108 DMKQRILPQYAEPDVVIYLQTAVENNRKRLQKRHE 142


>gi|322823023|gb|EFZ28892.1| hypothetical protein TCSYLVIO_4870 [Trypanosoma cruzi]
          Length = 261

 Score = 58.1 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 22/171 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N    I  EGI+G GK+     L   L        + R P             LS   + 
Sbjct: 49  NQKTLIVLEGIDGVGKSLVAQSLIEKL---GDSAVLIRTPHPD----------LSGIRET 95

Query: 62  FGAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117
           F A+ E  A  F +A           A  E KI++ DR+  S+ A               
Sbjct: 96  FRAQTEETARAFYSAANYLAAWDAFHATKERKIVVFDRWWCSTCAMALANSCRLAALPAA 155

Query: 118 -DSLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            D++ +      +P   +  +L +   I   R++ R            +++
Sbjct: 156 GDAIYQWPQD--LPPFQLGALLYVEEHIRQARIRQRAPEDAEERRLRAQQE 204


>gi|241997794|ref|XP_002405626.1| secreted NADH-ubiquinone oxireductase, putative [Ixodes scapularis]
 gi|215493731|gb|EEC03372.1| secreted NADH-ubiquinone oxireductase, putative [Ixodes scapularis]
          Length = 478

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 30/232 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------L 54
           I  EG  G GKT     L   L  K +      +          R +            +
Sbjct: 150 IVLEGNIGVGKTALAKSLADELGMKYFGEPSFDQLYVDEYGFDLRSIDHLAPEACRTCDI 209

Query: 55  LS--CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
                        +  ++    R +   + +   L  G+ ++ +R   S + +       
Sbjct: 210 KKFYEDPHNVNVASMQMIMFQLRFERYLDALVHLLNTGEGVVLERSPFSDFVFAETMHKF 269

Query: 113 QHLFLDSLQEISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            ++   +L+  ++       + + P   I LD P ++ L+R++ R    E        ++
Sbjct: 270 GYISKLALKAYNLMKEAGLPELLRPHLVIYLDAPSNVLLQRIKERNIPYEVQSK-VLTKE 328

Query: 166 DVMIHEKRR-QIFLDIARNQPD----RCHIVDSAHSFQSVATNILNIVWELV 212
            +   ++   Q +L   R+  +        +     F+ V  +I  I +E +
Sbjct: 329 YLDEIDRLYKQSYLRSIRDNSELLLYDWTTI---GEFELVVDDIERINFEAL 377


>gi|167571121|ref|ZP_02363995.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           oklahomensis C6786]
          Length = 227

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E               A
Sbjct: 18  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +H    I  A      ++ D F+   +  +A     D    L+     
Sbjct: 71  Q----LAFALQREHQAREIAAAYEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFARIQKRGQPMELQIGDAY 166


>gi|146320507|ref|YP_001200218.1| thymidylate kinase [Streptococcus suis 98HAH33]
 gi|145691313|gb|ABP91818.1| Thymidylate kinase [Streptococcus suis 98HAH33]
          Length = 48

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/32 (50%), Positives = 20/32 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          M +G FI+FEG +GAGKTT +  L   LQ   
Sbjct: 11 MRNGFFITFEGPDGAGKTTVLQQLLPALQAIG 42


>gi|325187770|emb|CCA22315.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 240

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 37/211 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G+GKT    ++   ++ + Y V           +   + +L            
Sbjct: 20  ICLEGCHGSGKT----VICNEMRAQGYPVLDEAFIDMPSYSLDPQSLL--METIWVCNWF 73

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS------L 120
           ++I+   +RL            + +I++ DR   S+ AY       Q L L        L
Sbjct: 74  QSILQLESRLHRTSK-------KHQIVIVDRSPFSAIAYARNGHLLQPLILQQMQEIQSL 126

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ---IF 177
           + I    V       +D+  D+   R+  R            E + +  HE  +      
Sbjct: 127 RRIQFHTVR------IDVDPDVLYARICVRLEQ---------EPERMRFHESDKNWMHTI 171

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           L      P    + + +   + V  +IL+ V
Sbjct: 172 LTFYNAFPWDFTVKNESSDIRKVVLDILHRV 202


>gi|155122111|gb|ABT13979.1| hypothetical protein MT325_M425R [Paramecium bursaria chlorella
           virus MT325]
          Length = 186

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 77/213 (36%), Gaps = 40/213 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ EG+ GAGK++ +    + LQ++   V    EP      +       +        + 
Sbjct: 4   IAIEGLMGAGKSSVL----QELQKRGIRVIA--EPTQDW--KYLDKFYGNRKKYALTLQI 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV- 125
           E ++                    ++++ +R    S +   +  SS+ +  D  ++++  
Sbjct: 56  EILLSF-----------LKYKFSNELVVVERSPQVSRSVFAKMLSSEGILSD--EDMATY 102

Query: 126 ----QEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                   P   D  I+LD P +I ++R  +R    +         + +   +K  +IF 
Sbjct: 103 VDIYDLAKPWEADMYIMLDCPTEICVERTGSRGDSYKITP------EYMKDLKKYYEIFF 156

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                    C  V+S      V  +++ I+ + 
Sbjct: 157 KYTD-----CKRVNSDRPINDVVDDVMEIISQA 184


>gi|300309953|ref|YP_003774045.1| deoxynucleoside kinase [Herbaspirillum seropedicae SmR1]
 gi|300072738|gb|ADJ62137.1| deoxynucleoside kinase protein [Herbaspirillum seropedicae SmR1]
          Length = 213

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 14/163 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ +G  GAGKT+  + L            + +  G    AE  R             
Sbjct: 7   RYIAIDGPIGAGKTSLATRLATLW---GAQALLEQPEGNPFLAEFYRDAARH------AF 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQ-E 122
           + +A  F   R+  ++  + PAL EG+  + D  L+ +  + Q      +    D+L  +
Sbjct: 58  QTQAF-FLLQRMGQLQAPLDPALAEGRF-IADFMLEKNILFAQLTLAGDELALYDALHRQ 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164
           +  Q  +PD  I L  P ++   R+  R    E A  LDY +R
Sbjct: 116 LQPQVRIPDLVIHLQAPPEVLQARIGARGIAMEQAISLDYLQR 158


>gi|195390295|ref|XP_002053804.1| GJ23142 [Drosophila virilis]
 gi|194151890|gb|EDW67324.1| GJ23142 [Drosophila virilis]
          Length = 408

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 24/224 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---------LLSC 57
           I  EG   +GKT     L   L  + +           P     R +             
Sbjct: 86  ICVEGPIASGKTKFAQELATELDMQYFPAVDLDLIYINPYGYDMRKLDPQLPPSCRSYDV 145

Query: 58  GVDEFGAEAEAIVFAAARLDHVE-----NVIRPALMEGKILLCDRFLDSSYAY------Q 106
                    E       R+  +      + ++     G+ ++ +R   S + +      Q
Sbjct: 146 KDFCRDPNHELAALFQIRMYMLRVSQYIDALQHIFSTGQGVVLERSPYSDFVFMEAMFRQ 205

Query: 107 GERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           G          + L++ ++ E+  P   I LDLPVD   K+++ R    E     + E  
Sbjct: 206 GYISRGARSVYNDLRQNTIGELLKPHLVIYLDLPVDAVQKQIKARNLEYEVKSKVFTEAY 265

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
              +    +Q +L       +   I D  +    + V  +I  I
Sbjct: 266 LRDLEALYKQQYLKDIAGHAE-LLIYDWSAGGETEVVVEDIERI 308


>gi|109287907|ref|YP_654601.1| hypothetical protein MIV029R [Invertebrate iridescent virus 3]
 gi|123873273|sp|Q197D1|VF143_IIV3 RecName: Full=Putative kinase protein 029R
 gi|106073530|gb|ABF82059.1| hypothetical protein MIV029R [Aedes taeniorhynchus iridescent
           virus]
          Length = 193

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 33/201 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS EGI G+GK++ +  LKR      Y  H  +EP    +       LL    D+    A
Sbjct: 5   ISIEGIIGSGKSSLMDQLKRH-----YTCH--QEPLHDWS-------LLQPFYDDMERYA 50

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               F      H + + I+       +++ +R   SS     +             E+ +
Sbjct: 51  SPFQFQVLFSFHKLYSTIK---NVNDVVILERCPWSSRNIFTKMLVQDGFISPQEYELYM 107

Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL-D 179
                     +  I L +   +   R+  R    E                +    +  +
Sbjct: 108 SFYDRLAFTTNLHIYLKVDPTVAFDRILKRNREAEKTL-------QYDYLVRLNHQYEAE 160

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
           I++   D  ++VD+    + V
Sbjct: 161 ISKC--DNVYVVDANKPMELV 179


>gi|256851657|ref|ZP_05557045.1| deoxyadenosine kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260661626|ref|ZP_05862538.1| deoxyadenosine kinase [Lactobacillus jensenii 115-3-CHN]
 gi|256615615|gb|EEU20804.1| deoxyadenosine kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260547683|gb|EEX23661.1| deoxyadenosine kinase [Lactobacillus jensenii 115-3-CHN]
          Length = 217

 Score = 57.7 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L    +   V++ P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 52

Query: 67  EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115
             +   +            I  AL E    ++ DR  + D+ +    A  G  D ++  +
Sbjct: 53  FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 107

Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++D +  +           PD  I +++ +D  L R++ R    E    D   ++    +
Sbjct: 108 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDTMLSRIKRRGREFEQLETDPSLKE---YY 164

Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211
            + R  +     N           D+ + VD+    ++V   I N + EL
Sbjct: 165 ARLRNYYEPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 214


>gi|282933307|ref|ZP_06338693.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1]
 gi|297205265|ref|ZP_06922661.1| deoxyadenosine kinase [Lactobacillus jensenii JV-V16]
 gi|281302603|gb|EFA94819.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1]
 gi|297149843|gb|EFH30140.1| deoxyadenosine kinase [Lactobacillus jensenii JV-V16]
          Length = 216

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L    +   V++ P            +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 51

Query: 67  EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115
             +   +            I  AL E    ++ DR  + D+ +    A  G  D ++  +
Sbjct: 52  FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 106

Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++D +  +           PD  I +++ +D  L R++ R    E    D   ++    +
Sbjct: 107 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDTMLSRIKRRGREFEQLETDPSLKE---YY 163

Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211
            + R  +     N           D+ + VD+    ++V   I N + EL
Sbjct: 164 ARLRNYYEPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 213


>gi|84043858|ref|XP_951719.1| adenylate kinase [Trypanosoma brucei TREU927]
 gi|33348700|gb|AAQ16024.1| adenylate kinase, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62358534|gb|AAX78995.1| adenylate kinase, putative [Trypanosoma brucei]
          Length = 260

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 59/241 (24%)

Query: 1   MNSGL----FISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARH 52
           M  G+    FI+  G  G+GK T    +   L            +TR            H
Sbjct: 44  MRRGIPLQIFIA--GPAGSGKRTQCKNIADRLGVVLISSGQ--VLTRGVESGSETSQLAH 99

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
             +S G      +    +    RL   +   +  L+EG                  R++ 
Sbjct: 100 SYVSRGERV--PDTLVSMIMKDRLSQSDAREKGWLVEGY----------------PRNAQ 141

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY----SLRESACLD-------- 160
           Q   ++         V+P   I+LDLP D+  +R+++R     + +E   LD        
Sbjct: 142 QAQAVEEC------GVIPQVFILLDLPEDLSFRRLEHRRYDPATNKEYHMLDNPPPAEDV 195

Query: 161 ----YFERKDVMIHE----KRRQIFLDI---ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                  ++D   HE    +  Q +  I    ++      +VD+  S + V  +IL  V 
Sbjct: 196 ALCERLVQRDADFHESIAKRLAQYYESIEGVKKHLGAVIEVVDARKSVEDVERDILAAVE 255

Query: 210 E 210
           +
Sbjct: 256 K 256


>gi|195111046|ref|XP_002000090.1| GI10047 [Drosophila mojavensis]
 gi|193916684|gb|EDW15551.1| GI10047 [Drosophila mojavensis]
          Length = 252

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 70/203 (34%), Gaps = 24/203 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64
            EG  G+GKTT ++      Q+ + DV +  EP          ++L              
Sbjct: 25  IEGNIGSGKTTFLN----HFQKYDKDVCLITEPVEKWRNVNGVNLLEKMYKDPQKWAMPF 80

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++   +          +     +     +   R+      Y     S +    ++LQE  
Sbjct: 81  QSYVTLTMLQAHTAATDKKLKIIERS--IFSSRYCFVENMY--RNGSLELGMYNTLQEWY 136

Query: 125 VQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                   V  D  I L    ++  +R++ R    ES     + ++   +HE        
Sbjct: 137 KFIAESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----WL 191

Query: 180 IARNQPDRCH--IVDSAHSFQSV 200
           I + +P +C   ++++  + +++
Sbjct: 192 IHQRRPQQCKVLVLNADLNLENI 214


>gi|115350704|ref|YP_772543.1| deoxynucleoside kinase [Burkholderia ambifaria AMMD]
 gi|115280692|gb|ABI86209.1| deoxynucleoside kinase [Burkholderia ambifaria AMMD]
          Length = 228

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 49/164 (29%), Gaps = 20/164 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E               A
Sbjct: 18  RYLVIEGPIGVGKTTLARLLGERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123
           +   + FA  R      +I  AL  G+ ++ D               +       L   I
Sbjct: 71  Q---LSFALERAQQARELI-GALDTGRPVVAD---YMPQKNDIFARLNLPEDEWQLYRSI 123

Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +      Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 124 ATHLDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|109101925|ref|XP_001099309.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like isoform 1 [Macaca
           mulatta]
          Length = 448

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 54/229 (23%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  ++ EG++  GKTT    +   L+     V +   P      +  R +      
Sbjct: 247 QKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DDE 297

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LD 118
                 A    ++         + + +      ++ DR+  S+  Y    + S  L  L 
Sbjct: 298 PTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLP 352

Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160
                  Q          D           +  +  L+R+Q R   +       E+  + 
Sbjct: 353 PAHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV- 404

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                     +K    +  +    P  CH+VD++   + V   +L+++ 
Sbjct: 405 --------FRQKVEMSYQRM--ENPG-CHVVDASPCREKVLQTVLSLIQ 442


>gi|296537404|ref|ZP_06899251.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957]
 gi|296262270|gb|EFH09048.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957]
          Length = 44

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 18/38 (47%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
            G FI+ EG EGAGKTT    L   L      V  TR
Sbjct: 7  TQGRFITLEGGEGAGKTTLARALSSRLAAAGLPVLRTR 44


>gi|269839810|ref|YP_003324503.1| Thymidylate kinase-like protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791540|gb|ACZ43680.1| Thymidylate kinase-like protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 603

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 34/208 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--------RHV 53
            +G+ +SF GI+G+GKT H   L                 GG+    A         R  
Sbjct: 357 QAGMVVSFSGIDGSGKTAHARALAEAFSLCELQARYFWCRGGSTGLLALASRARALLRRN 416

Query: 54  LLSCGVDEFGAEAEAIVFAAARL---------DHVENVIRPALME--GKILLCDRFLDSS 102
             +   D        +     R            +  ++   L    GKI++CDR++  +
Sbjct: 417 RRASNPDAVLRRRRELAHPLLRWGWTWGVALDQVLSYLVGVHLRARTGKIVVCDRYIYDA 476

Query: 103 YAYQGERDSSQHLFLDSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
                     +     +     ++    PD   +LDL       R        E      
Sbjct: 477 AVEVLASLPKEDRMTRAAIAFMLRVVPRPDLGYLLDLEPSDARARKPEEPWHSELDAE-- 534

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCH 189
                       R+++L++A     R  
Sbjct: 535 ------------RRLYLELADRFGLRVV 550


>gi|195055660|ref|XP_001994731.1| GH14441 [Drosophila grimshawi]
 gi|193892494|gb|EDV91360.1| GH14441 [Drosophila grimshawi]
          Length = 252

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 24/206 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT ++    + Q+   +V +  EP          ++L          +  A
Sbjct: 25  IEGNIGSGKTTFLN----YFQKYKNEVTLITEPVEKWRNVNGVNLL---DKMYKDPKKWA 77

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEIS 124
           + F +     +      A  + K+ + +R + S+ Y +        S +    ++LQE  
Sbjct: 78  MPFQSYVTLTLLQA-HTAATDKKLKILERSIYSARYCFVENMYRNGSLEPGMYNTLQEWF 136

Query: 125 VQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                   V  D  I L    ++  +R++ R    ES     + ++   +HE        
Sbjct: 137 KFIDEAIHVQADLIIYLRTSPEVAYERIRERARSEESCVPLKYLQELHELHED-----WL 191

Query: 180 IARNQPDRCHIV--DSAHSFQSVATN 203
           I   +P  C ++  D+    + + + 
Sbjct: 192 IHHRRPQHCKVLVMDADLKLEDIISE 217


>gi|17933656|ref|NP_524445.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform A
           [Drosophila melanogaster]
 gi|24648886|ref|NP_732692.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform B
           [Drosophila melanogaster]
 gi|12644364|sp|P91929|NDUAA_DROME RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|7300804|gb|AAF55947.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform A
           [Drosophila melanogaster]
 gi|15291839|gb|AAK93188.1| LD29280p [Drosophila melanogaster]
 gi|23171948|gb|AAN13899.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform B
           [Drosophila melanogaster]
 gi|220945916|gb|ACL85501.1| ND42-PA [synthetic construct]
 gi|220955674|gb|ACL90380.1| ND42-PA [synthetic construct]
          Length = 407

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 28/226 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54
           I  EG   AGK+     L   L  + Y                 R +             
Sbjct: 85  ICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144

Query: 55  ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
               L    D   A+ +  ++   R     + ++  L  G+ ++ +R   S + +     
Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHVLSTGQGVVLERSPYSDFVFMEAMF 202

Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            QG          + L++ ++ E+  P   I LDLPVD   K+++ R    E     + +
Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
                + +  +Q +L       +   I D  +    + V  +I  I
Sbjct: 263 AYLSDLEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307


>gi|116326838|ref|YP_803376.1| thymidine kinase [Trichoplusia ni ascovirus 2c]
 gi|102231846|gb|ABF70669.1| thymidine kinase [Trichoplusia ni ascovirus 2c]
          Length = 219

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 29/184 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS EG  G+GK+T I+ L    +       +T + G          + L   +  F  + 
Sbjct: 4   ISIEGNIGSGKSTIINKLVE--EYDGKVRGITEDVGNWNLLGP---MYLQPKIFAFPFQM 58

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLF------ 116
           + ++     + H + N     L +  I++ +R   SSY         D   + F      
Sbjct: 59  QVLISQYNTMKHIINNTTYETLNDDTIIVIERSPWSSYNVFVKMMVNDGILNKFEHDAYK 118

Query: 117 ------LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169
                 +DSL            TI L    D+ +KR+  R    E      Y E+ +   
Sbjct: 119 KFYHYIMDSLYSGVFN------TIYLKTSPDVCMKRISQRGRKEELNMSRTYIEKLN-NY 171

Query: 170 HEKR 173
           HE  
Sbjct: 172 HEMV 175


>gi|300115340|ref|YP_003761915.1| hypothetical protein Nwat_2842 [Nitrosococcus watsonii C-113]
 gi|299541277|gb|ADJ29594.1| hypothetical protein Nwat_2842 [Nitrosococcus watsonii C-113]
          Length = 516

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 78/253 (30%), Gaps = 58/253 (22%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-----------RKNYDVHVTREPGGTPAAEAAR 51
            G+ ++F G +G+GK++      ++L              +    + R P     A   +
Sbjct: 279 GGVLVAFLGCDGSGKSSLAEDTAKWLSWKIDAMPVYLGSGDGPSSLLRWPMKVTLAALQK 338

Query: 52  HVLLSC-------GVDEFGAEAEAIVFAA--------ARLDHVENV-----IRPALMEGK 91
             LL         G D   +   +++           A    +E       I  A  +G 
Sbjct: 339 LGLLQKKQPAGTRGDDNRLSRGRSLLALVRPALKVPWALALALEKRGKLRRITKARNKGM 398

Query: 92  ILLCDRFLDSSYAYQGERDSSQHL---------FLDSLQEISVQEVM---PDCTIILDLP 139
           I++CDR+  S     G+     H           L + + I  Q+     PD  I L + 
Sbjct: 399 IVVCDRYPQSQVMGFGDGPLLNHWRNHPWKIKRILAAWEAIPYQKAELYPPDLIIKLQVT 458

Query: 140 VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199
            +  L+R            ++  +R       K                  VD+   F  
Sbjct: 459 PETALQRKGEMDIEECKRRVEAVKRLQYPPFTKVAD---------------VDANQIFDD 503

Query: 200 VATNILNIVWELV 212
           V   +   +WE V
Sbjct: 504 VLLQVKRYIWEEV 516


>gi|172059735|ref|YP_001807387.1| deoxynucleoside kinase [Burkholderia ambifaria MC40-6]
 gi|171992252|gb|ACB63171.1| deoxynucleoside kinase [Burkholderia ambifaria MC40-6]
          Length = 228

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 49/164 (29%), Gaps = 20/164 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E               A
Sbjct: 18  RYLVIEGPIGVGKTTLARLLGERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123
           +   + FA  R      +I  AL  G+ ++ D               +       L   I
Sbjct: 71  Q---LSFALERAQQARELI-GALDTGRPVVAD---YMPQKNDIFARLNLPEDEWQLYRSI 123

Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +      Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 124 ATHLDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|78065317|ref|YP_368086.1| deoxynucleoside kinase [Burkholderia sp. 383]
 gi|77966062|gb|ABB07442.1| Deoxynucleoside kinase [Burkholderia sp. 383]
          Length = 228

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 26/167 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTTLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           +   + FA  R      +I  AL  G+ ++ D      +  Q     ++    +   ++ 
Sbjct: 71  Q---LSFALQRAQQARELI-GALETGRPVIAD------FMPQKNDIFARLNLPEDEWQLY 120

Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                     Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 121 RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|331674541|ref|ZP_08375301.1| conserved hypothetical protein [Escherichia coli TA280]
 gi|331068635|gb|EGI40030.1| conserved hypothetical protein [Escherichia coli TA280]
          Length = 230

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +     F+  L          ++     PD  I L++ +++   R        +  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACAR----KPDHKRE 181

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            L+      + I  +       +          +D+    + V  +    + + +  R
Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|115298542|ref|YP_762395.1| 24.5 kDa Thymidine kinase [Spodoptera frugiperda ascovirus 1a]
 gi|21668305|emb|CAC84464.1| thymidine kinase [Spodoptera frugiperda ascovirus 1a]
 gi|114416809|emb|CAL44640.1| 24.5 kDa Thymidine kinase [Spodoptera frugiperda ascovirus 1a]
          Length = 210

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 69/219 (31%), Gaps = 29/219 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+S EG  G+GK++ +             V+   EP           +        F  E
Sbjct: 8   FVSVEGNIGSGKSSVMRKAAERYDGL---VYFCEEPVEEWGLLMY--MYNDPARYAFPFE 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQ----------H 114
            + +    ++     +     L  G ++++ +R   S  AY       +           
Sbjct: 63  LQVL---TSKYQKWLDSYETCLRTGARVVIMERSPWS--AYDVFTRMMRDRGSITDKQFD 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           ++ D  + +       D  + +D   D   +R Q R    E          DV   E+  
Sbjct: 118 VYTDVFRSLENDIPRIDHVVYIDTKPDTCHRRAQERGREAEK-------SLDVEYFERV- 169

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + +     +      +++     + V  +   ++  +V+
Sbjct: 170 ECYTKRYVDNHSSVFVLNGNLPREDVLASFNRVLDGIVE 208


>gi|298368468|ref|ZP_06979786.1| deoxyguanosine kinase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282471|gb|EFI23958.1| deoxyguanosine kinase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 212

 Score = 57.3 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G+GK+     L +  +      H+T  P   P  E      L+        
Sbjct: 4   RYIVVEGSIGSGKSELSRRLAKHFEAL----HLTESPERNPFLE---QFYLNASNHGLAT 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           E   + F   R ++V ++I     +G  ++ D FL   D  +     +D  Q LF +  +
Sbjct: 57  E---LFFLMRRAENV-DIINAEEDKGGRIIAD-FLLEKDQIFVPVVLKDPEQTLFWELRR 111

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR----ESACLDYFERKDVMIHE 171
           +I  Q  +PD  + L    +   KR+Q R         S  L   +++      
Sbjct: 112 KIMPQYPVPDLVVYLQTSGEADTKRLQRRGDGILSMFPSGYLGKIQQEYSRFFH 165


>gi|157878768|ref|XP_001687401.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|321438060|emb|CBZ11812.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 274

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 29/178 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++G GKT     L   L         T  P  T      R      G +E  A A
Sbjct: 70  IVVEGLDGTGKTLVTRTLAEKLSG---VAISTPPPQFTEIRNTFR------GQEEAVARA 120

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123
               ++AA     E ++  A  +  +++ DR+  S+ A                 ++   
Sbjct: 121 ---FYSAANYIAAEGIL--AASQSSVVVVDRWWCSTCAMALANGCLYDSLPPSGAAVYRW 175

Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                 PD   +L +              +   +R  +         ++ + R +++I
Sbjct: 176 PEDLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSQREMRCVAMEAYRRTNMLI 233


>gi|146299479|ref|YP_001194070.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Flavobacterium johnsoniae UW101]
 gi|146153897|gb|ABQ04751.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Flavobacterium johnsoniae UW101]
          Length = 377

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 76/216 (35%), Gaps = 22/216 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+FEG  GAGKTT +  +      K         P                    F  E
Sbjct: 180 YIAFEGNIGAGKTTLVHKIAEDFNAKTVLERFADNPFLP-------KFYKDQNRYAFPLE 232

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124
                F A R   + + +    +    ++ D  +  S  +           L  +L +I 
Sbjct: 233 MS---FLADRYQQLSDDLAQFDLFKDFIVADYHIFKSLIFAKITLQEDEYRLYRNLFDII 289

Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +E   PD  I L    D  L+ ++ R    E       E + +    K    +L+  ++
Sbjct: 290 YKEMPKPDLYIYLYQNTDRLLQNIKKRGRTYEQN----IEAQYLD---KINNGYLEYIKS 342

Query: 184 QPD-RCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217
           Q D    I+D S   F     + L ++ E +QK+++
Sbjct: 343 QKDLNVLIIDVSDRDFVKKQEDYLFVLNE-IQKKLN 377


>gi|242024050|ref|XP_002432443.1| NADH-Ubiquinone oxidoreductase 42KDa subunit [Pediculus humanus
           corporis]
 gi|212517876|gb|EEB19705.1| NADH-Ubiquinone oxidoreductase 42KDa subunit [Pediculus humanus
           corporis]
          Length = 360

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 25/169 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-------VLLSC 57
             I  EG    GK+     L   L  K        +     +    R        ++ S 
Sbjct: 70  KIIVVEGPIACGKSAFAQELAEQLDMKYIPQPTMDDYYILYSGYDLRQHDDELPSIVRSF 129

Query: 58  GVDEF-----GAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
              +F       ++    I     R     + +   L  G+ ++ +R   +  AY     
Sbjct: 130 DHRKFCVNPTDPKSCIYQINMMFLRFFQYVDALAHLLNTGQGVILERSFYTYAAY----- 184

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                 +D+    S     P   I LD+P+ +  +R+  R    E    
Sbjct: 185 ------MDANLYASTFFKKPHLIIYLDIPIPVVQERICTRNYSYEQNSP 227


>gi|149573007|ref|XP_001520130.1| PREDICTED: similar to thymidylate kinase family LPS-inducible
           member, partial [Ornithorhynchus anatinus]
          Length = 223

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 75/222 (33%), Gaps = 40/222 (18%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I  EG++  GKTT    +   L      V +   P   P  +  R V      
Sbjct: 23  QKGPFPVIVIEGLDATGKTTVTRSVSESLNA----VLLKSPP---PCMDEWRKVF--DKE 73

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
                 A    ++         + R +      ++ DR+  S+ A+    + S  L  L 
Sbjct: 74  PTIIKRA---FYSLGNYIVASEIARASTQSP--VIIDRYWHSTAAFAIATEVSGGLQNLP 128

Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  Q          D           L  +  ++R+Q R   +    ++     + 
Sbjct: 129 PAHHGVYQWPR-------DLLKPDLVLLLTLSSEERVRRIQGRGVEKTEEEMEL--EAND 179

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +K    +  +    P  C IVD++HS + V  N+L+++ 
Sbjct: 180 LFRQKVEMSYQRM--ENPG-CQIVDASHSREKVLENVLHLIK 218


>gi|134294828|ref|YP_001118563.1| deoxynucleoside kinase [Burkholderia vietnamiensis G4]
 gi|134137985|gb|ABO53728.1| deoxynucleoside kinase [Burkholderia vietnamiensis G4]
          Length = 228

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E               A
Sbjct: 18  RYLVIEGPIGVGKTTLARLLAERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           +   + FA  R      ++  AL  G+ ++ D      +  Q     ++    +   ++ 
Sbjct: 71  Q---LAFALQRAQQARELL-GALDTGRPVVAD------FMPQKNDIFARLNLPEDEWQLY 120

Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                     Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 121 RAIAAHVDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|156399321|ref|XP_001638450.1| predicted protein [Nematostella vectensis]
 gi|156225571|gb|EDO46387.1| predicted protein [Nematostella vectensis]
          Length = 242

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 44/217 (20%)

Query: 7   ISFEGIEGAGKTTHISL-----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++ EG  G+GKTT +       +   L+     V   +  GG+   +     L+      
Sbjct: 30  VAIEGNIGSGKTTLLKYFRQNPIVEILEE---PVKKWQNVGGSNILD-----LMYKDPKR 81

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSL 120
           +    E+ V  +    H      P      + L +R   S  AY    ++  ++  + S+
Sbjct: 82  WSYMFESYVLLSMMKLHHNTQKAP------VRLLERSAYS--AYFCFIENLHRNGLVTSV 133

Query: 121 Q--------EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           +        E  +++  P  D  I L    +  +KRV+ R    ES          + + 
Sbjct: 134 EYSIFQEWFEFLLEQQKPQLDLIIYLRTSPENCMKRVKMRSRSEESTV-------SMDLI 186

Query: 171 EKRRQIFLD-IARNQ----PDRCHIVDSAHSFQSVAT 202
           +   + + D + R      P    +VD   S   +  
Sbjct: 187 QNLHERYEDWLIRKTKFHVPAPVVVVDGNQSLAELFE 223


>gi|260447972|gb|ACX38394.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|315137583|dbj|BAJ44742.1| hypothetical protein ECDH1ME8569_2886 [Escherichia coli DH1]
          Length = 230

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQTGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|306816671|ref|ZP_07450803.1| hypothetical protein ECNC101_08634 [Escherichia coli NC101]
 gi|305850236|gb|EFM50695.1| hypothetical protein ECNC101_08634 [Escherichia coli NC101]
          Length = 230

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       ++           +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI-----TPLLTF-----GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|300973440|ref|ZP_07172196.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|300410782|gb|EFJ94320.1| conserved hypothetical protein [Escherichia coli MS 45-1]
          Length = 230

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 46/238 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG- 107
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 108 -----ERDSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRV--QNRYSLRESA 157
                        +L S +  +   +    PD  I L++ +++   R     R SL    
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHGMASHKPDLVIKLNVDLEVACARKPDHKRESLARKI 187

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +       +            +          +D+    + V  +    + + +  R
Sbjct: 188 AI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|323173769|gb|EFZ59398.1| hypothetical protein ECLT68_2087 [Escherichia coli LT-68]
          Length = 230

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 72/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAAR 51
            I+  G +G+GK+T    L   +++      VH+ ++ G            G    +   
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 52  HVLLSCGVDEFGAEAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
              +       G     ++ A  AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQMKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|25144561|ref|NP_741215.1| NADH Ubiquinone Oxidoreductase family member (nuo-4)
           [Caenorhabditis elegans]
 gi|687841|gb|AAA62532.1| Hypothetical protein K04G7.4a [Caenorhabditis elegans]
          Length = 436

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 75/230 (32%), Gaps = 34/230 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGG---TPAAEAARHVLL 55
             I  EG  G+GKTT    L   L      + +  D+ V R             AR+ L 
Sbjct: 73  KLIVVEGNIGSGKTTLAKQLADQLGFVHFPEFRMDDILVDRYGNDLRNYYNKFPARYRLP 132

Query: 56  SCGVDEFGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
              +       E       R+     D   N +   L  G+ ++ +R   S + +     
Sbjct: 133 DISMFYKNPSGELSAAMQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMR 192

Query: 111 SSQHL---------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
              ++         F+     +      P   + L+ P +  L+ ++ R +  E A +D 
Sbjct: 193 DKNYIGHEYFKHYYFVRK-NALPQLHFWPHLVVYLNTPTNKCLENIKRRGNTDEIATVD- 250

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAHS--FQSVATNILNI 207
            ER      +   + + D  R   +   I+  D        +V  +I  +
Sbjct: 251 -ER----YLKTIEESYKDSLREYRNHSKILAYDWTKPGDTDAVVEDIERL 295


>gi|300718285|ref|YP_003743088.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299064121|emb|CAX61241.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 252

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 78/240 (32%), Gaps = 54/240 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHV---------- 53
            I+  G +G GK+T  + L R LQ++   V   R  G       +  + +          
Sbjct: 27  LIAVVGSDGTGKSTLTADLVRNLQKQ--RVTERRYLGLISGEDGDKIKRLPVIGVWLERR 84

Query: 54  --LLSCGVDEFGAEAEAIV-------FAAARLDHVENVIRPALMEGKILLCDRF---LDS 101
               S        +  A+        F+  R  +++  IR A   G +++ DR+     S
Sbjct: 85  LAAKSDKTQRMSNKPPALWAALIMYGFSLWRSSNLQKAIRLA-QSGVLVISDRYPQAEIS 143

Query: 102 SYAYQGERDSSQHLFLDSLQEIS---------VQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            + Y G     +      +  ++         +  + P   + LD+ VD    R      
Sbjct: 144 GFYYDGPGIGVERAKGWLMSRLAESERRLYQQMALIRPQLILRLDIDVDTAYAR------ 197

Query: 153 LRESACLDY-FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                  D+ +E  +  I    R  +         R   +D+   +  V    L+ +  +
Sbjct: 198 -----KPDHSYEELEDKISAMVRIQY------NGSRIIELDARAPYDEVLAKALDSITAV 246


>gi|218696695|ref|YP_002404362.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli 55989]
 gi|260857126|ref|YP_003231017.1| hypothetical protein ECO26_4094 [Escherichia coli O26:H11 str.
           11368]
 gi|260869748|ref|YP_003236150.1| hypothetical protein ECO111_3815 [Escherichia coli O111:H- str.
           11128]
 gi|218353427|emb|CAU99497.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli 55989]
 gi|257755775|dbj|BAI27277.1| conserved hypothetical protein [Escherichia coli O26:H11 str.
           11368]
 gi|257766104|dbj|BAI37599.1| conserved hypothetical protein [Escherichia coli O111:H- str.
           11128]
          Length = 230

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAIMDFMTAR 227


>gi|320661741|gb|EFX29149.1| putative protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli O55:H7 str. USDA 5905]
          Length = 230

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +   ++ + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKVITDFMTAR 227


>gi|300916907|ref|ZP_07133610.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300415877|gb|EFJ99187.1| conserved hypothetical protein [Escherichia coli MS 115-1]
          Length = 230

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 75/241 (31%), Gaps = 52/241 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAAR 51
            I+  G +G+GK+T    L   +++      VH+ ++ G            G    +   
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 52  HVLLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG 107
              +       G     ++  F A RL    N++      G I+L DR+       AY G
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRNML-ACRRRGLIVLTDRYPQDQIPGAYDG 126

Query: 108 ER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLR 154
                +     F+  L          ++     PD  I L++ +++   R     R SL 
Sbjct: 127 TVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLA 184

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               +       +            +          +D+    + V  +    + + +  
Sbjct: 185 RKIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTA 226

Query: 215 R 215
           R
Sbjct: 227 R 227


>gi|206561605|ref|YP_002232370.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           cenocepacia J2315]
 gi|198037647|emb|CAR53590.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           cenocepacia J2315]
          Length = 228

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 26/167 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTTLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           +   + FA  R      +I  AL  G+ ++ D      +  Q     ++    +   ++ 
Sbjct: 71  Q---LSFALQRAQQARELI-GALDTGRPVIAD------FMPQKNDIFARLNLPEDEWQLY 120

Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                     Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 121 RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|22297644|ref|NP_680891.1| adenylate kinase [Thermosynechococcus elongatus BP-1]
 gi|29427444|sp|Q8DML4|KAD_THEEB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|22293821|dbj|BAC07653.1| adenylate kinase [Thermosynechococcus elongatus BP-1]
          Length = 195

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 73/226 (32%), Gaps = 54/226 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I F G  G+GK T  ++L   L         T   G    AE A   LL      +  
Sbjct: 2   RLILF-GGPGSGKGTQAAILTTLL---GIPHIST---GDILRAERAAGTLLGQQAQSYMD 54

Query: 65  EAEAIV------FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             E +         A RL       +P    G       +L   +   G + +     L 
Sbjct: 55  RGELVPDQVIVDMVANRLQ------QPDTAAG-------WLLDGFPRNGAQAAVFEEMLK 101

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----------LDY---FERK 165
           S+ +        D  + LD+P  I  +R  NR     +            L     +ER+
Sbjct: 102 SIHQDY------DYLLFLDVPAAILQERALNRAKQAVNGQQRSDDTPETILKRLQVYERE 155

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            + + ++    ++    + P +   +D   + + V   I   + E+
Sbjct: 156 TLPMIQQ----YM----SHP-KFVPIDGTRTIEEVTAAIQARIGEV 192


>gi|17738037|ref|NP_524399.1| deoxyribonucleoside kinase [Drosophila melanogaster]
 gi|20454871|sp|Q9XZT6|DNK_DROME RecName: Full=Deoxynucleoside kinase; AltName:
           Full=Deoxyribonucleoside kinase; Short=Dm-dNK; AltName:
           Full=Multispecific deoxynucleoside kinase
 gi|31615910|pdb|1OT3|A Chain A, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|31615911|pdb|1OT3|B Chain B, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|31615912|pdb|1OT3|C Chain C, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|31615913|pdb|1OT3|D Chain D, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|31615914|pdb|1OT3|E Chain E, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|31615915|pdb|1OT3|F Chain F, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|31615916|pdb|1OT3|G Chain G, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|31615917|pdb|1OT3|H Chain H, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase
           Complexed With The Substrate Deoxythymidine
 gi|186972823|pdb|2VP0|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972824|pdb|2VP0|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|5924308|gb|AAD56545.1|AF185268_1 deoxyribonucleoside kinase [Drosophila melanogaster]
 gi|7025919|gb|AAD47355.2|AF045610_1 deoxyribonucleoside kinase [Drosophila melanogaster]
 gi|4741228|emb|CAB41881.1| deoxynucleoside kinase [Drosophila melanogaster]
 gi|7300459|gb|AAF55615.1| deoxyribonucleoside kinase [Drosophila melanogaster]
 gi|20976886|gb|AAM27518.1| LD27103p [Drosophila melanogaster]
 gi|220950078|gb|ACL87582.1| dnk-PA [synthetic construct]
 gi|220959178|gb|ACL92132.1| dnk-PA [synthetic construct]
          Length = 250

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT+++      ++   D+ +  EP          ++L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P     K+ + +R + S+ Y +        S +    ++L+E 
Sbjct: 78  MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    V  D  I L    ++  +R++ R    ES     + ++   +HE       
Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190

Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200
            I + +P  C   ++D+  + +++
Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214


>gi|16130886|ref|NP_417460.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89109761|ref|AP_003541.1| hypothetical protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K-12 substr. W3110]
 gi|157158978|ref|YP_001464450.1| hypothetical protein EcE24377A_3453 [Escherichia coli E24377A]
 gi|170018755|ref|YP_001723709.1| hypothetical protein EcolC_0707 [Escherichia coli ATCC 8739]
 gi|170082534|ref|YP_001731854.1| nucleoside triphosphate hydrolase domain-containing protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|194436674|ref|ZP_03068774.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|238902104|ref|YP_002927900.1| hypothetical protein BWG_2704 [Escherichia coli BW2952]
 gi|253772175|ref|YP_003035006.1| hypothetical protein ECBD_0752 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162940|ref|YP_003046048.1| hypothetical protein ECB_02862 [Escherichia coli B str. REL606]
 gi|256019090|ref|ZP_05432955.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Shigella sp. D9]
 gi|297517095|ref|ZP_06935481.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli OP50]
 gi|300905887|ref|ZP_07123620.1| hypothetical protein HMPREF9536_03879 [Escherichia coli MS 84-1]
 gi|300923643|ref|ZP_07139671.1| hypothetical protein HMPREF9548_01836 [Escherichia coli MS 182-1]
 gi|300950810|ref|ZP_07164696.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300958367|ref|ZP_07170508.1| hypothetical protein HMPREF9547_04081 [Escherichia coli MS 175-1]
 gi|301304168|ref|ZP_07210284.1| hypothetical protein HMPREF9347_02768 [Escherichia coli MS 124-1]
 gi|301643648|ref|ZP_07243689.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|307139676|ref|ZP_07499032.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli H736]
 gi|312972752|ref|ZP_07786925.1| uncharacterized ATP-binding protein yghT [Escherichia coli 1827-70]
 gi|331643687|ref|ZP_08344818.1| conserved hypothetical protein [Escherichia coli H736]
 gi|2833410|sp|Q46844|YGHT_ECOLI RecName: Full=Uncharacterized ATP-binding protein yghT
 gi|882515|gb|AAA69153.1| ORF_o230 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789359|gb|AAC76022.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675794|dbj|BAE77047.1| hypothetical protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K12 substr. W3110]
 gi|157081008|gb|ABV20716.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|169753683|gb|ACA76382.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
 gi|169890369|gb|ACB04076.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K-12 substr. DH10B]
 gi|194424156|gb|EDX40143.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|238863055|gb|ACR65053.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BW2952]
 gi|242378542|emb|CAQ33328.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BL21(DE3)]
 gi|253323219|gb|ACT27821.1| conserved hypothetical protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974841|gb|ACT40512.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli B str. REL606]
 gi|253978996|gb|ACT44666.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BL21(DE3)]
 gi|284923013|emb|CBG36105.1| conserved hypothetical protein [Escherichia coli 042]
 gi|300314951|gb|EFJ64735.1| hypothetical protein HMPREF9547_04081 [Escherichia coli MS 175-1]
 gi|300402356|gb|EFJ85894.1| hypothetical protein HMPREF9536_03879 [Escherichia coli MS 84-1]
 gi|300420084|gb|EFK03395.1| hypothetical protein HMPREF9548_01836 [Escherichia coli MS 182-1]
 gi|300449905|gb|EFK13525.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300840581|gb|EFK68341.1| hypothetical protein HMPREF9347_02768 [Escherichia coli MS 124-1]
 gi|301078032|gb|EFK92838.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|309703422|emb|CBJ02761.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|310332694|gb|EFP99907.1| uncharacterized ATP-binding protein yghT [Escherichia coli 1827-70]
 gi|315256885|gb|EFU36853.1| conserved hypothetical protein [Escherichia coli MS 85-1]
 gi|315614988|gb|EFU95626.1| uncharacterized ATP-binding protein yghT [Escherichia coli 3431]
 gi|323936009|gb|EGB32304.1| yghT protein [Escherichia coli E1520]
 gi|323941912|gb|EGB38091.1| gyghT [Escherichia coli E482]
 gi|323960963|gb|EGB56582.1| gyghT [Escherichia coli H489]
 gi|331037158|gb|EGI09382.1| conserved hypothetical protein [Escherichia coli H736]
 gi|332102545|gb|EGJ05891.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 230

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|194911336|ref|XP_001982332.1| GG11101 [Drosophila erecta]
 gi|190656970|gb|EDV54202.1| GG11101 [Drosophila erecta]
          Length = 407

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 76/229 (33%), Gaps = 34/229 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54
           I  EG   AGK+     L   L  + Y                 R +             
Sbjct: 85  ICVEGPIAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDLRKLDPQLPPSCRSYDV 144

Query: 55  ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
               L    D   A+ +  ++   R     + ++  L  G+ ++ +R   S + +     
Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAMF 202

Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACL---D 160
            QG          + L++ ++ E+  P   I LDLPVD   K+++ R    E       D
Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
            +   DV +  K  Q +L       +   I D  +    + V  +I  I
Sbjct: 263 AYLS-DVELLYK--QQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307


>gi|71411155|ref|XP_807839.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70871923|gb|EAN85988.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 261

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 29/181 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N    I  EGI+G GK+     L   L        + R P             L+   + 
Sbjct: 49  NQKTLIVLEGIDGVGKSLVAQSLIERL---GDSAVLIRTPHPD----------LNGIRET 95

Query: 62  FGAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117
           F A+ E  A  F +A           A  E K+++ DR+  S+ A               
Sbjct: 96  FRAQTEETARAFYSAANYLAAWDAFHATKERKVVVFDRWWCSTCAMALANSCRLTALPAA 155

Query: 118 -DSLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            D++ +      +P   +  +L +   I   R++ R            E + +   ++ R
Sbjct: 156 GDAVYQWPQD--LPPFQLGALLYVEEHIRQARIRQRAPEDA-------EERRLSAQQEMR 206

Query: 175 Q 175
           +
Sbjct: 207 E 207


>gi|255021399|ref|ZP_05293447.1| deoxynucleoside kinase family protein [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969262|gb|EET26776.1| deoxynucleoside kinase family protein [Acidithiobacillus caldus
           ATCC 51756]
          Length = 202

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 43/231 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I  EG  GAGKT+   LL   +        + R        +  RH        
Sbjct: 1   MKAARLIVVEGPMGAGKTSLTRLLAAAMA---IPAVLERPADNPFLGDFYRH-------- 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHL 115
           +    A  + F   R           L   ++ + D       + +    + E       
Sbjct: 50  QQHVLATELYFLMQR-----RKTWDGLEGDRLYVADHGPEKDRIFTPLTLEAETLRLFRE 104

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
              +L   + +       I LD PVD+ L+R++ R    E+               + + 
Sbjct: 105 IRAALSYNAPRVP---LLIYLDSPVDVLLERIRARQDPWEA-------SMQRAYVLRVQD 154

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNIL------NIVWELVQKRVSPLS 220
            +    R+ P    ++D      +VA + +       I+ E+V+ +++ L 
Sbjct: 155 AYRQWLRHYPG--QVLD----LSTVAGDFVADSEHAKILTEMVKNKITELG 199


>gi|145528967|ref|XP_001450272.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417883|emb|CAK82875.1| unnamed protein product [Paramecium tetraurelia]
          Length = 232

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 25/211 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDEFG 63
            IS EG  G+GK+T + L    +Q+K  D+    EP              LL    ++  
Sbjct: 8   LISIEGNIGSGKSTLLKL----MQQKYPDLRFIPEPVNEWQCINGDPSLNLLGSFYEDST 63

Query: 64  AEAEAIVFAAA--RLDHVENVIRPAL--MEGKILLCDRFLDS---SYAYQGERDS----- 111
             A  +   A   RL H + V+   +   E  ++L +R +++    +A  G ++      
Sbjct: 64  RWAYTMQVYAFYSRLKHWKEVLSDPINPEERHLILSERSIEADKEIFAVNGHKNGLINKL 123

Query: 112 ---SQHLFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  F D L +E+  +++     I L +  ++  +R+Q R    E        ++ +
Sbjct: 124 EFALYEKFYDWLCEEVFGKKIQKQMIIYLQVDPEVCHQRMQKRARDEEKNT---ISKEYL 180

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198
                R + +L    ++     +++    F+
Sbjct: 181 TQIHNRHEEWLLRETHKNTSILVLNGDQEFE 211


>gi|262155793|ref|ZP_06028916.1| putative deoxyribonucleoside kinase [Vibrio cholerae INDRE 91/1]
 gi|262030384|gb|EEY49025.1| putative deoxyribonucleoside kinase [Vibrio cholerae INDRE 91/1]
          Length = 195

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 16/156 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GK+T +  L   L    ++     E             LL    +    E
Sbjct: 3   YITLEGNVGVGKSTLLHRLADEL---GWEAV--EEGIEFDEGF---QTLLKERYENPTPE 54

Query: 66  --AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A+  ++ A     +   I  AL   K  + +R + ++  +      ++   +D+L   
Sbjct: 55  NVAKLQLYVANF---MAERIN-ALDPKKFYVVERSVFATELFSLAA--NRPDIIDALAGH 108

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
            ++   P+  + L  P  + L+R++ R    E   +
Sbjct: 109 VLRVPAPEFYLYLSAPPRLCLERIRERDRTGEGEGI 144


>gi|134095808|ref|YP_001100883.1| deoxynucleoside kinase [Herminiimonas arsenicoxydans]
 gi|133739711|emb|CAL62762.1| Deoxynucleoside kinase [Herminiimonas arsenicoxydans]
          Length = 213

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 15/156 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  GAGKTT    L      +     +   P   P  E         G      
Sbjct: 7   KYVVVEGAIGAGKTTLAGKLAAQFGAQ----TLLERPEENPFLEKFYR---DAGRYALPT 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   + F   RL+ + ++ +P L + +I+   L D   D  +A     D    L+     
Sbjct: 60  Q---MFFLFQRLNQLRDLAQPDLFDARIVSDFLLD--KDPIFARLTLGDDELALYQQLYD 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            +  Q  +PD  I L       + R++ R    E+ 
Sbjct: 115 HLRPQAPLPDLVIYLQAEPQTLIDRIKKRGIPMEAG 150


>gi|324005423|gb|EGB74642.1| hypothetical protein HMPREF9532_04933 [Escherichia coli MS 57-2]
          Length = 230

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 76/240 (31%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL---LSCGVD 60
            I+  G +G+GK+T    L   +++      VH+ ++ G    A     ++   L   ++
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVSRAVTKLPLMGKSLHKTIE 67

Query: 61  EFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
               +          A+V  A  AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|119899433|ref|YP_934646.1| putative deoxyguanosine kinase [Azoarcus sp. BH72]
 gi|119671846|emb|CAL95760.1| putative deoxyguanosine kinase [Azoarcus sp. BH72]
          Length = 213

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 25/184 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++   +I  EG  GAGKT+    L   L        +  +P   P            G D
Sbjct: 2   LDKARYIVVEGPIGAGKTSLARRLAARLPAD----TLFEQPETNPFLGRFYQ-----GSD 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--- 117
            +    +   F   R D +         EG+ ++ D  LD    +     +   L L   
Sbjct: 53  RWALATQLS-FLFQRFDQLAAHAADQ-AEGRRVVSDFVLDKDPLFAALNLADDELALYHR 110

Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             D+++  +    +PD  I L    +   +RV+ R    E    +          E+  +
Sbjct: 111 IFDAMKPPA--PPVPDLVIYLQAKPETLAERVRKRGMDAERRITE-------AYLERVAE 161

Query: 176 IFLD 179
            +  
Sbjct: 162 RYAR 165


>gi|330877891|gb|EGH12040.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race
          4]
          Length = 36

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          +GLFI+ EG EGAGK+T+   L   L+ +   V
Sbjct: 2  TGLFITLEGPEGAGKSTNREYLAAQLRAQGVKV 34


>gi|195356990|ref|XP_002044905.1| GM13644 [Drosophila sechellia]
 gi|195569783|ref|XP_002102888.1| GD19261 [Drosophila simulans]
 gi|194123798|gb|EDW45841.1| GM13644 [Drosophila sechellia]
 gi|194198815|gb|EDX12391.1| GD19261 [Drosophila simulans]
          Length = 250

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT+++      ++   D+ +  EP          ++L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P     K+ + +R + S+ Y +        S +    ++L+E 
Sbjct: 78  MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    V  D  I L    ++  +R++ R    ES     + ++   +HE       
Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHED-----W 190

Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200
            I + +P  C   ++D+  + +++
Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214


>gi|30248102|ref|NP_840172.1| deoxynucleoside kinase [Nitrosomonas europaea ATCC 19718]
 gi|30179987|emb|CAD83982.1| Deoxynucleoside kinase [Nitrosomonas europaea ATCC 19718]
          Length = 214

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 16/164 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  GAGKT+    +   L        +  +P   P  E         G      
Sbjct: 7   RYIVVEGPIGAGKTSLARNMATRLNYS----LMLEQPEANPFLEKFY------GDMSRHT 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
            +  + F   R+  ++++ R  +   + ++ D FL   D  +A     +    L+    +
Sbjct: 57  LSTQLFFLIQRMQQLQSMERENVFS-RSVISD-FLFEKDRLFADVTLSEPEHGLYRQIRE 114

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164
            + +    PD  I L    +I ++R++ R +  E     DY  R
Sbjct: 115 HMPLNAPRPDLVIYLQAAPEILIRRIRQRGNALEQRISEDYLRR 158


>gi|323168170|gb|EFZ53857.1| hypothetical protein SS53G_1651 [Shigella sonnei 53G]
          Length = 230

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPRPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|331648777|ref|ZP_08349865.1| conserved hypothetical protein [Escherichia coli M605]
 gi|330909045|gb|EGH37559.1| conserved protein YghT, with nucleoside triphosphate hydrolase
           domain [Escherichia coli AA86]
 gi|331042524|gb|EGI14666.1| conserved hypothetical protein [Escherichia coli M605]
          Length = 230

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPAPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +     F+  L          ++     PD  I L++ +D+   R        +  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACAR----KPDHKRE 181

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            L+      + I  +       +          +D+    + V  +    + + +  R
Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|307310379|ref|ZP_07590027.1| protein with nucleoside triphosphate hydrolase domain protein
           [Escherichia coli W]
 gi|306909274|gb|EFN39769.1| protein with nucleoside triphosphate hydrolase domain protein
           [Escherichia coli W]
 gi|315062305|gb|ADT76632.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli W]
 gi|323377110|gb|ADX49378.1| hypothetical protein EKO11_0727 [Escherichia coli KO11]
 gi|324119798|gb|EGC13678.1| gyghT [Escherichia coli E1167]
          Length = 230

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLIDAEKAITDFMTAR 227


>gi|258593050|emb|CBE69361.1| Deoxynucleoside kinase family protein [NC10 bacterium 'Dutch
           sediment']
          Length = 218

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 24/179 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              +I  EG  G GKT+   LL   LQ           P  T      R           
Sbjct: 7   KPRYIVVEGPIGVGKTSLAELLAERLQAGKLLEGPDENPFITQFYTDMRRYAFQTQ---- 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119
                 + F   R    + + +  L +  ++  D +L   D  +AY    D+   L+ + 
Sbjct: 63  ------LYFLLNRFRQQQELAQFDLFKQSLV-SD-YLFVKDKIFAYLTLDDNELALY-ER 113

Query: 120 LQ-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           LQ  +  + V PD  + L    D+ ++R+Q+R    E       E+      E     +
Sbjct: 114 LQPLLETRVVKPDLVLYLQAGTDVLIRRIQSRARASERE----LEQ---SYLEDVNAAY 165


>gi|227887693|ref|ZP_04005498.1| protein with nucleoside triphosphate hydrolase domain protein
           [Escherichia coli 83972]
 gi|227835089|gb|EEJ45555.1| protein with nucleoside triphosphate hydrolase domain protein
           [Escherichia coli 83972]
 gi|307555081|gb|ADN47856.1| hypothetical ATP-binding protein YghT [Escherichia coli ABU 83972]
          Length = 230

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRSVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|119504370|ref|ZP_01626450.1| DNA polymerase III, epsilon subunit [marine gamma proteobacterium
           HTCC2080]
 gi|119459878|gb|EAW40973.1| DNA polymerase III, epsilon subunit [marine gamma proteobacterium
           HTCC2080]
          Length = 231

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 66/195 (33%), Gaps = 27/195 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---REPGGTPAAEAARHVLLSCGVDEF 62
           +I+ EG  G GKTT    L       NY V +      P      +  +   L       
Sbjct: 24  YIAVEGPIGVGKTTLARRLAEAF---NYQVLLEDAHENPFLDRFYQNRKEAAL------- 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDS 119
              A  + F   R   + ++ +  + E   +   L D   D  +A          L+   
Sbjct: 74  ---ATQLFFLFQRSQKIADLRQTDIFEPVRVSDFLID--KDPLFARINLDPDEYSLYEKV 128

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            Q++++   +PD  I L    D  L+R+ +R    E       +R+ +    +    F  
Sbjct: 129 FQQLTIDAPLPDLVIYLQASPDRLLERILSRGVSSERG----IDREYLEQINEVYSEFFL 184

Query: 180 IARNQPDRCHIVDSA 194
                P    IV++ 
Sbjct: 185 YYDAAP--LLIVNAN 197


>gi|222034709|emb|CAP77451.1| Uncharacterized ATP-binding protein yghT [Escherichia coli LF82]
 gi|312947547|gb|ADR28374.1| hypothetical protein NRG857_14820 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 230

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMAAR 227


>gi|332169541|gb|AEE18796.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Krokinobacter diaphorus 4H-3-7-5]
          Length = 378

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 63/195 (32%), Gaps = 30/195 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  +++      K         P                    F  E
Sbjct: 183 YITIEGNIGAGKTSLATMISDEFNAKLILERFKDNPFLP-------KFYKDPDRFAFPLE 235

Query: 66  AEAIVFAAARLDHV------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                F A R   +       ++ +  +        DR+    +A Q      + L    
Sbjct: 236 MS---FLADRYQQLLDDLGQYDLFKDFMCADY----DRYKSLIFA-QVTLQEEEFLLYKR 287

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           L E+  ++   PD  + L    +  LK +  R    E +        D    EK  Q +L
Sbjct: 288 LHEMMYKDMPQPDLYVYLYQNTERLLKNINKRGRSYEKSI-------DPTYLEKINQGYL 340

Query: 179 DIARNQPD-RCHIVD 192
           D  + Q +    I+D
Sbjct: 341 DFIKTQHNLNVKIID 355


>gi|218674841|ref|ZP_03524510.1| hypothetical protein RetlG_27040 [Rhizobium etli GR56]
          Length = 177

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 64/209 (30%), Gaps = 47/209 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64
            EG+ GAGKT     +   LQR+ Y V    RE    G     EA          +    
Sbjct: 8   IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYRGDPTTGEAVDE----PADESVTD 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +     A     H+ +V       GK+  ++ DR   S  ++      +   F+D    
Sbjct: 60  RS-----AWVHAHHLWDV-------GKVRTMIVDR--RSLISFFCGGSRNLPRFVDWF-- 103

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                   D    LD+ +D   +R+  R               +  +  +          
Sbjct: 104 --------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHAT----KE 146

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + P     +D+      V   IL+   E 
Sbjct: 147 DVPKHAQRIDATAPLAVVVNEILSKCGEA 175


>gi|82778245|ref|YP_404594.1| hypothetical protein SDY_3087 [Shigella dysenteriae Sd197]
 gi|81242393|gb|ABB63103.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 234

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 74/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  GI+G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 12  LIAVIGIDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 71

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 72  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 131

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 132 VFPPNVEGGRFVSWLASQQRKAFHWMASH--KPDLVIKLNVDLEVACMRKPDHKRQSLAR 189

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 190 KIAI----TPQLTF------GGAQLVD--------IDANRPLEQVLIDAEKAITDFMTAR 231


>gi|218706613|ref|YP_002414132.1| hypothetical protein ECUMN_3470 [Escherichia coli UMN026]
 gi|293406603|ref|ZP_06650529.1| predicted protein [Escherichia coli FVEC1412]
 gi|298382342|ref|ZP_06991939.1| ATP-binding protein yghT [Escherichia coli FVEC1302]
 gi|300900323|ref|ZP_07118502.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|218433710|emb|CAR14627.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli UMN026]
 gi|291426609|gb|EFE99641.1| predicted protein [Escherichia coli FVEC1412]
 gi|298277482|gb|EFI18998.1| ATP-binding protein yghT [Escherichia coli FVEC1302]
 gi|300356213|gb|EFJ72083.1| conserved hypothetical protein [Escherichia coli MS 198-1]
          Length = 230

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +     F+  L          ++     PD  I L++ +D+   R        +  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACAR----KPDHKRE 181

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            L+      + I  +       +          +D+    + V  +    + + +  R
Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|242016294|ref|XP_002428764.1| Deoxynucleoside kinase, putative [Pediculus humanus corporis]
 gi|212513449|gb|EEB16026.1| Deoxynucleoside kinase, putative [Pediculus humanus corporis]
          Length = 284

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 68/234 (29%), Gaps = 61/234 (26%)

Query: 5   LFISF-----------EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            FI+F           EG  G GKTT ++       ++N +     EP           +
Sbjct: 65  KFITFYSSDKPFTIIVEGNVGCGKTTFLNNF-----QRNSNFLTLYEPIEEWKNVKGIDL 119

Query: 54  --LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
             L    +  +    +  VF      H +   +P        + +R + S          
Sbjct: 120 MNLFYNDLKTWSFSFQTYVFLTMMKIHEKKTNKPFK------IMERSIYS-------GRY 166

Query: 112 SQHLFLDSLQEISVQEV----------------MPDCTIILDLPVDIGLKRVQNRYSLRE 155
                L  L  I+  E+                  D  + L    ++  +R+  R    E
Sbjct: 167 VFIENLYKLNLITQPELAVLDEWFQWLVSTNCAKVDLIVYLRTNPEVAYERILKRGRAGE 226

Query: 156 SACLDYFERKDVMIHEKRRQIFLD-IARNQPDRCHI-----VDSAHSFQSVATN 203
           +               K  +++ + + + + +         +D+    Q++  +
Sbjct: 227 TL--------PFEYVTKIHELYENWLIKKKNNSFCHAPVWCIDANQDLQTIKND 272


>gi|297180958|gb|ADI17161.1| deoxynucleoside kinases [uncultured gamma proteobacterium
           HF0070_08D07]
          Length = 236

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 15/155 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKTT    L     ++     +  EP              +        +
Sbjct: 26  FIAIEGPIGVGKTTLAKRLAETFGKQ-----LLLEPSFENP--FLESFYANGSKFALPTQ 78

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
              + F   R   +  + +P ++E +++  D FL   D  +A          L+ +    
Sbjct: 79  ---LYFLLNRARQLAEIPQPGILEQQLV-SD-FLFEKDRLFAELTLNKEELKLYDEITLN 133

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +S+    P+  + L  P  + L R+++R  L E +
Sbjct: 134 LSLNIPKPNLVVYLQAPTSVLLDRIRDRGMLVEKS 168


>gi|26346402|dbj|BAC36852.1| unnamed protein product [Mus musculus]
          Length = 227

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 41  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 79  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 185

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L+  +       +  +   +D++ S   V   ++ I
Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 222


>gi|255513638|gb|EET89903.1| thymidylate kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 218

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 27/223 (12%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           + EG +G+GK+T  ++L   +      V    +          R  L     D   A   
Sbjct: 5   AIEGCDGSGKSTISAMLSERMP--GSKVI--EQSKRVDFLPDLRDFLNGQAGDLILAR-- 58

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEISV 125
            +++         N       +G   +  R + S+ AY    D+      +   + +I  
Sbjct: 59  -LIYFLGTNQLSSNEAAENERKGIDTILVRSIYSTKAYHFAYDALYDGDANKSVINDIVA 117

Query: 126 QE----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 V PD  + L +  +  ++R+  R +++ S  LD ++ K +         F   A
Sbjct: 118 SAERSLVHPDIVVFLHVGKEERVRRIARREAVKNS-SLD-WDSKIMAF---IDSEFYKYA 172

Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVW----ELVQKR 215
               +R       I ++  + +     I++ +       +++R
Sbjct: 173 AELRERGKAQVIEIDNTNLTPEETVDCIISKIALGKIRAIKRR 215


>gi|22164298|gb|AAM93654.1|AF483732_1 putative secreted NADH-ubiquinone oxireductase [Ixodes scapularis]
          Length = 409

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 30/234 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             I  EG  G GKT     L   L  K +      +          R +           
Sbjct: 79  KVIVLEGNIGVGKTALAKSLADELGMKYFGEPSFDQLYVDEYGFDLRSIDHLAPEACRTC 138

Query: 54  ---LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
                          +  ++    R +   + +   L  G+ ++  R   S + +     
Sbjct: 139 DIQKFYEDPHNVNVASMQMIMFQLRFERYLDALVHLLNTGEGVVLKRSPFSDFVFAETMH 198

Query: 111 SSQHLFLDSLQEISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
              ++   +L+  ++       + + P   I LD P ++ L+R++ R    E        
Sbjct: 199 KFGYISKLALKAYNLMKEAGLPELLRPHLVIYLDAPSNVLLQRIKERNIPYEVQSK-VLA 257

Query: 164 RKDVMIHEKRR-QIFLDIARNQPD----RCHIVDSAHSFQSVATNILNIVWELV 212
           ++ +   ++   Q +L   R+  +        +     F+ V  +I  I +E +
Sbjct: 258 KEYLDEIDRLYKQSYLRSIRDNSELLLYDWTTI---GEFELVVDDIERINFEAL 308


>gi|254455539|ref|ZP_05068968.1| adenylate kinase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082541|gb|EDZ59967.1| adenylate kinase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 187

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 68/213 (31%), Gaps = 41/213 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEFGA 64
           I   G  GAGK T    L   L                   +  R  +        +   
Sbjct: 3   IILFGPPGAGKGTQSKYLVNKL-----------NNFQISTGDILRDEIKKNSDIGKQITN 51

Query: 65  EAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           +    +F +  +  + VE ++     +      DRF+   Y     R  SQ   LD L  
Sbjct: 52  DMNDGIFISDDIVNELVEKLVNDPQKK------DRFIFDGY----PRSLSQAKNLDDLLN 101

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF----- 177
            S Q++  D    L++  +  +KR++ R  L   +  D      +    KR   +     
Sbjct: 102 NSNQKI--DHIFFLNVNKETIIKRIEKRKVLENRSDDD------MNTIIKRYDTYMETTK 153

Query: 178 --LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             LD     P+  H +D       +   I N +
Sbjct: 154 PVLDFYSKNPN-FHEIDGTQEIDEITRKIDNFI 185


>gi|291398950|ref|XP_002715160.1| PREDICTED: UMP-CMP kinase 1 [Oryctolagus cuniculus]
          Length = 225

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 39  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 76

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + EGKI+       L  R +D + A   +++           D+
Sbjct: 77  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 129

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 130 LQGWNKTMDGKADVSFVLFFDCNDEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 183

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 184 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 220


>gi|301019936|ref|ZP_07184071.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|299882034|gb|EFI90245.1| conserved hypothetical protein [Escherichia coli MS 196-1]
          Length = 230

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRSVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNIEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLIDAEKAITDFMTAR 227


>gi|17942828|pdb|1J90|A Chain A, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase
 gi|17942829|pdb|1J90|B Chain B, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase
 gi|38492608|pdb|1OE0|A Chain A, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase
           In Complex With Dttp
 gi|38492609|pdb|1OE0|B Chain B, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase
           In Complex With Dttp
 gi|38492610|pdb|1OE0|C Chain C, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase
           In Complex With Dttp
 gi|38492611|pdb|1OE0|D Chain D, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase
           In Complex With Dttp
 gi|186972731|pdb|2JJ8|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972732|pdb|2JJ8|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972733|pdb|2JJ8|C Chain C, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972734|pdb|2JJ8|D Chain D, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972825|pdb|2VP2|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972826|pdb|2VP2|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972827|pdb|2VP4|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972828|pdb|2VP4|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972829|pdb|2VP4|C Chain C, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972830|pdb|2VP4|D Chain D, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972831|pdb|2VP5|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972832|pdb|2VP5|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972833|pdb|2VP6|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972834|pdb|2VP6|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972835|pdb|2VP6|C Chain C, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972836|pdb|2VP6|D Chain D, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972837|pdb|2VP6|E Chain E, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972838|pdb|2VP6|F Chain F, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972839|pdb|2VP6|G Chain G, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972840|pdb|2VP6|H Chain H, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972841|pdb|2VP9|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972842|pdb|2VP9|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972843|pdb|2VP9|C Chain C, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972844|pdb|2VP9|D Chain D, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972845|pdb|2VP9|E Chain E, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972846|pdb|2VP9|F Chain F, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972847|pdb|2VP9|G Chain G, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972848|pdb|2VP9|H Chain H, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972895|pdb|2VQS|A Chain A, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972896|pdb|2VQS|B Chain B, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972897|pdb|2VQS|C Chain C, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|186972898|pdb|2VQS|D Chain D, Structural Studies Of Nucleoside Analog And Feedback
           Inhibitor Binding To Drosophila Melanogaster
           Multisubstrate Deoxyribonucleoside Kinase
 gi|225733912|pdb|2VPP|A Chain A, Drosophila Melanogaster Deoxyribonucleoside Kinase
           Successfully Activates Gemcitabine In Transduced Cancer
           Cell Lines
 gi|225733913|pdb|2VPP|B Chain B, Drosophila Melanogaster Deoxyribonucleoside Kinase
           Successfully Activates Gemcitabine In Transduced Cancer
           Cell Lines
          Length = 230

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT+++      ++   D+ +  EP          ++L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P     K+ + +R + S+ Y +        S +    ++L+E 
Sbjct: 78  MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    V  D  I L    ++  +R++ R    ES     + ++   +HE       
Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190

Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200
            I + +P  C   ++D+  + +++
Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214


>gi|40062620|gb|AAR37549.1| deoxyguanosine kinase, putative [uncultured marine bacterium 311]
          Length = 229

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 65/203 (32%), Gaps = 29/203 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F++ EG  G GKTT   LL    + +        +P   P          +       A
Sbjct: 16  KFLAVEGPIGVGKTTLTKLLAESFRYE----TFLEQPSENPF---LADFYKNPSQ---SA 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            A  + F   R+  ++++ +  +     +   L D   D  +A +      +    + + 
Sbjct: 66  LATQLFFLFQRVKQIQDLKQGDIFTPIHVSDFLLD--KDKLFA-KVTLSEHELSLYNQIY 122

Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHEK---- 172
           + +S+    PD  I L        KRV  R    E       LD                
Sbjct: 123 DYLSLDLPTPDLVIYLQAETKTLFKRVIQREREIEKNISFEYLDLLNESYKEFFLNYDRS 182

Query: 173 ----RRQIFLDIARNQPDRCHIV 191
                   FLD+A NQ D   ++
Sbjct: 183 PVLIVNSEFLDLAHNQNDYILLL 205


>gi|320645360|gb|EFX14369.1| putative protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli O157:H- str. 493-89]
 gi|320650673|gb|EFX19130.1| putative protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli O157:H- str. H 2687]
 gi|320656368|gb|EFX24275.1| putative protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320666892|gb|EFX33868.1| putative protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli O157:H7 str. LSU-61]
          Length = 230

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|17389257|gb|AAH17684.1| Cytidine monophosphate (UMP-CMP) kinase 1 [Mus musculus]
          Length = 227

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 41  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 79  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 185

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L+  +       +  +   +D++ S   V   ++ I
Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 222


>gi|119953035|ref|YP_945244.1| deoxyguanosine kinase [Borrelia turicatae 91E135]
 gi|119861806|gb|AAX17574.1| deoxyguanosine kinase [Borrelia turicatae 91E135]
          Length = 205

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 58/172 (33%), Gaps = 23/172 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +GL I  EG+ G GKTT   +L +       ++    E                    
Sbjct: 1   MEAGLVIVIEGLIGVGKTTLGHVLSKEF-----NIPFYSELNNEFTLSMLDKFYKDKSR- 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQGERDSSQ------ 113
                  A +     L+    +I+     +G   + DR +     +    + S       
Sbjct: 55  ------WAFLVQINFLNERFKLIKSIFKTKGG--ILDRSIYGDRVFASLLNDSGYISNDE 106

Query: 114 -HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
             ++LD L  +      P   I LD  VD   +R++NR    E+    +Y E
Sbjct: 107 YKIYLDLLDNMLEHSQKPVLMIYLDCSVDEAERRIKNRNRSFETGIPREYLE 158


>gi|239637752|ref|ZP_04678719.1| deoxynucleoside kinase family protein [Staphylococcus warneri
           L37603]
 gi|239596654|gb|EEQ79184.1| deoxynucleoside kinase family protein [Staphylococcus warneri
           L37603]
          Length = 202

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 17/162 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        V   P  +   +            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHKLSQSLDFYEEKEIVDENPFLSDFYDDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119
           ++  + E + F   R    +++   +L +G  ++ D  +  +  +     DS +      
Sbjct: 51  KWSFQTE-MFFLCNRYKQFKDI--ESLHKG--IVSDYHIYKNKIFAKNTLDSHEFNKFSR 105

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           + +I  +++ MP+  I LD  +D+   R+  R    E    D
Sbjct: 106 IYDILTEDLTMPNTIIFLDAELDVLKHRIAKRNRSFEHQIED 147


>gi|319745776|gb|EFV98071.1| deoxynucleoside kinase [Streptococcus agalactiae ATCC 13813]
          Length = 213

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 55/237 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L + L     DV                  +L     +   
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117
            A  +   F   R       I+ A      +L DR +       +  Y+    +   L +
Sbjct: 49  YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103

Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 + L+E+  + +  PD  + +D+  D  L+R+  R           FE+ D   H
Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRS--------FEQVDS--H 153

Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSA-----HSFQSVATNILNIVWELVQK 214
            +    +  +    P+            +D        + + +  ++L+ +   +QK
Sbjct: 154 PELYDYYKQVHSEYPEWYENYDVSPKIRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209


>gi|114777133|ref|ZP_01452153.1| deoxynucleoside kinase [Mariprofundus ferrooxydans PV-1]
 gi|114552654|gb|EAU55114.1| deoxynucleoside kinase [Mariprofundus ferrooxydans PV-1]
          Length = 236

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 20/173 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKTT    L   L     D     +    P  E           +    + 
Sbjct: 32  ICIEGAIGVGKTTLARKLADKL---GSDTFF-EQVDDNPFIELFYQ---DPSRNALSVQL 84

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEISV 125
             +     +   +    +    +G  ++ D      + +     S + L L + +  +  
Sbjct: 85  SFLFSRLKQWQSLHQ--QDLFRQG--VISDYLFAKDHIFATVTLSDEELALYEQVARLVS 140

Query: 126 QEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            ++  PD  I L     + +KR+Q R    E           +   EK    +
Sbjct: 141 VDIQRPDLVIYLQSKPSVIMKRIQQRNRAMERG-------MKMEYLEKVITAY 186


>gi|15805330|ref|NP_294022.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus
           radiodurans R1]
 gi|6457975|gb|AAF09883.1|AE001891_2 deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus
           radiodurans R1]
          Length = 205

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 15/154 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           +++  EG  G GKT+    L +      N +V     P      E             F 
Sbjct: 1   MYVVVEGPIGVGKTSLAQRLAQRSGAELNLEVVE-ENPFLAKFYEQ-------PQAYAFQ 52

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQ- 121
            +A  ++   +R   +  + +P L   + ++ D   D  + +           L   L  
Sbjct: 53  VQAFFLL---SRFKQLSQLWQPGLYRPE-VVSDYLFDKDFIFAAMNLRDAEFDLYQDLYG 108

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
            +S +   PD  + L       L+R+  R    E
Sbjct: 109 HLSPRLPTPDLVVYLRADPPELLRRIARRGRPFE 142


>gi|13508125|ref|NP_110074.1| deoxyguanosine kinase/ deoxyadenosine kinase [Mycoplasma pneumoniae
           M129]
 gi|2496356|sp|P75396|Y386_MYCPN RecName: Full=Uncharacterized protein MG268 homolog
 gi|1674139|gb|AAB96099.1| deoxyguanosine kinase/deoxyadenosine kinase [Mycoplasma pneumoniae
           M129]
 gi|301633462|gb|ADK87016.1| conserved hypothetical protein [Mycoplasma pneumoniae FH]
          Length = 229

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 77/219 (35%), Gaps = 31/219 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I+F      GKTT    L + L  K   V    E       +    +LL+   +  
Sbjct: 21  GGM-IAF------GKTTIAESLAKHL--KGSKVIYELEEQ-----DQLADLLLAKMYERN 66

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL 120
                A +F      +  N  R         + DR  F D  +A Q     S   + + L
Sbjct: 67  DELLYAPLFQLYFTLNRFNKYRKECNNKTPTIFDRSIFEDWLFAKQNIHRPSIFTYYNHL 126

Query: 121 QE------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                   I    + P   +IL+   ++  +R+  R    E   +D F  K+    +   
Sbjct: 127 WNGIVKELIFKHGI-PALYVILEGDWELFEQRLFQRNRKVE---IDNF-AKNKDYFKNLY 181

Query: 175 QIFLDIARN----QPDRCHIVDSAHSFQSVATNILNIVW 209
           +I+ +  +N          IV++  S +S+   +L ++ 
Sbjct: 182 KIYGEFIKNVCYDFGISHCIVNANQSVESITKQVLEVLK 220


>gi|67464020|pdb|1ZMX|A Chain A, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464021|pdb|1ZMX|B Chain B, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464022|pdb|1ZMX|G Chain G, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464023|pdb|1ZMX|H Chain H, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464024|pdb|1ZMX|E Chain E, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464025|pdb|1ZMX|F Chain F, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464026|pdb|1ZMX|C Chain C, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464027|pdb|1ZMX|D Chain D, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase N64d Mutant In Complex With Thymidine
 gi|67464401|pdb|1ZM7|A Chain A, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase Mutant N64d In Complex With Dttp
 gi|67464402|pdb|1ZM7|B Chain B, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase Mutant N64d In Complex With Dttp
 gi|67464403|pdb|1ZM7|C Chain C, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase Mutant N64d In Complex With Dttp
 gi|67464404|pdb|1ZM7|D Chain D, Crystal Structure Of D. Melanogaster Deoxyribonucleoside
           Kinase Mutant N64d In Complex With Dttp
          Length = 230

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 80/204 (39%), Gaps = 26/204 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT+++      ++   D+ +  EP           +L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVDLL---ELMYKDPKKWA 77

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P     K+ + +R + S+ Y +        S +    ++L+E 
Sbjct: 78  MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    V  D  I L    ++  +R++ R    ES     + ++   +HE       
Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190

Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200
            I + +P  C   ++D+  + +++
Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214


>gi|165377065|ref|NP_079923.3| UMP-CMP kinase [Mus musculus]
 gi|12832572|dbj|BAB22163.1| unnamed protein product [Mus musculus]
 gi|74138708|dbj|BAE27170.1| unnamed protein product [Mus musculus]
 gi|74189516|dbj|BAE36771.1| unnamed protein product [Mus musculus]
 gi|74213836|dbj|BAE29352.1| unnamed protein product [Mus musculus]
 gi|123297837|emb|CAM19996.1| cytidylate kinase 1 [Mus musculus]
 gi|148698717|gb|EDL30664.1| mCG16168 [Mus musculus]
          Length = 227

 Score = 56.2 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 41  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 79  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 185

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L+  +       +  +   +D++ S   V   ++ I
Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 222


>gi|196004192|ref|XP_002111963.1| hypothetical protein TRIADDRAFT_23783 [Trichoplax adhaerens]
 gi|190585862|gb|EDV25930.1| hypothetical protein TRIADDRAFT_23783 [Trichoplax adhaerens]
          Length = 188

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 36/188 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT+ I+    + Q        T+EP          ++    G+     + 
Sbjct: 1   ICIEGNIGCGKTSMINY---YSQMNGL--MATKEPVDKWRNLGDHNLF---GLFYEDPKR 52

Query: 67  EAIVF-------AAARLDHVENVIRPALMEGKILLCDRFLDS-SYAY------QGERDSS 112
            + +F          R  HV ++ + A       L +R + S +Y +      +     S
Sbjct: 53  WSFLFQSYVMITMYQRHQHVASLAKNAY------LMERSVYSANYCFVENLRAEKLMSDS 106

Query: 113 QHLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF-----ER 164
           ++  L +  +     V P  D  + L    +I  +R++ R  + E+   LDY        
Sbjct: 107 EYRVLQAYFDHFTDAVRPQIDMIVYLQCAPEICYERIKRRQRVEENRITLDYIRCLHQRH 166

Query: 165 KDVMIHEK 172
           +D +IH K
Sbjct: 167 EDWLIHRK 174


>gi|331684631|ref|ZP_08385223.1| conserved hypothetical protein [Escherichia coli H299]
 gi|320195136|gb|EFW69765.1| hypothetical protein EcoM_02901 [Escherichia coli WV_060327]
 gi|331078246|gb|EGI49452.1| conserved hypothetical protein [Escherichia coli H299]
          Length = 230

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 76/242 (31%), Gaps = 54/242 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHV-----LLSCG 58
            I+  G +G+GK+T    L   +++      VH+ ++ G      A   +      L   
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGN--VGRAVTKLPLMGKSLHKT 65

Query: 59  VDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQ 106
           +++   +          A+V  A  AR       +      G I+L DR+       AY 
Sbjct: 66  IEKNEVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYD 125

Query: 107 GER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSL 153
           G     +     F+  L          ++     PD  I L++ +++   R     R SL
Sbjct: 126 GTVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESL 183

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                +       +            +          +D+    + V  +    + + + 
Sbjct: 184 ARKIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMT 225

Query: 214 KR 215
            R
Sbjct: 226 AR 227


>gi|26249554|ref|NP_755594.1| ATP-binding protein yghT [Escherichia coli CFT073]
 gi|91212400|ref|YP_542386.1| ATP-binding protein YghT [Escherichia coli UTI89]
 gi|117625292|ref|YP_854464.1| nucleoside triphosphate hydrolase domain-containing protein
           [Escherichia coli APEC O1]
 gi|191172551|ref|ZP_03034091.1| conserved hypothetical protein [Escherichia coli F11]
 gi|218560061|ref|YP_002392974.1| hypothetical protein ECS88_3368 [Escherichia coli S88]
 gi|218691277|ref|YP_002399489.1| hypothetical protein ECED1_3636 [Escherichia coli ED1a]
 gi|237706267|ref|ZP_04536748.1| nucleoside triphosphate hydrolase domain-containing protein
           [Escherichia sp. 3_2_53FAA]
 gi|300993125|ref|ZP_07180211.1| hypothetical protein HMPREF9553_04265 [Escherichia coli MS 200-1]
 gi|301048199|ref|ZP_07195235.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|331659268|ref|ZP_08360210.1| hypothetical ATP-binding protein YghT [Escherichia coli TA206]
 gi|26109962|gb|AAN82167.1|AE016766_255 Hypothetical ATP-binding protein yghT [Escherichia coli CFT073]
 gi|91073974|gb|ABE08855.1| hypothetical ATP-binding protein YghT [Escherichia coli UTI89]
 gi|115514416|gb|ABJ02491.1| putative protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli APEC O1]
 gi|190907219|gb|EDV66818.1| conserved hypothetical protein [Escherichia coli F11]
 gi|218366830|emb|CAR04600.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli S88]
 gi|218428841|emb|CAR09642.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli ED1a]
 gi|226899307|gb|EEH85566.1| nucleoside triphosphate hydrolase domain-containing protein
           [Escherichia sp. 3_2_53FAA]
 gi|294493257|gb|ADE92013.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|300299957|gb|EFJ56342.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300305140|gb|EFJ59660.1| hypothetical protein HMPREF9553_04265 [Escherichia coli MS 200-1]
 gi|307625410|gb|ADN69714.1| hypothetical protein UM146_01425 [Escherichia coli UM146]
 gi|315288781|gb|EFU48179.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|315291266|gb|EFU50626.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|315297637|gb|EFU56914.1| conserved hypothetical protein [Escherichia coli MS 16-3]
 gi|323951491|gb|EGB47366.1| yghT protein [Escherichia coli H252]
 gi|323957863|gb|EGB53577.1| yghT protein [Escherichia coli H263]
 gi|324011919|gb|EGB81138.1| hypothetical protein HMPREF9533_04077 [Escherichia coli MS 60-1]
 gi|331053850|gb|EGI25879.1| hypothetical ATP-binding protein YghT [Escherichia coli TA206]
          Length = 230

 Score = 56.2 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|322372126|ref|ZP_08046667.1| adenylate kinase [Haladaptatus paucihalophilus DX253]
 gi|320548135|gb|EFW89808.1| adenylate kinase [Haladaptatus paucihalophilus DX253]
          Length = 205

 Score = 55.8 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 73/239 (30%), Gaps = 65/239 (27%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN  + I   G  GAGK T  + +       + +   T         +A R        +
Sbjct: 1   MNPNILIL--GAPGAGKGTQSARIAEEF---DVEHVTT--------GDALRAN-KHMETE 46

Query: 61  EFGAEAEAIVFAAARLDHV-----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +          + V       ++  AL E      D ++   Y     R+ SQ  
Sbjct: 47  HGTPAS-----FMDAGELVPDPVVNEIVNAALSE-----ADGYVLDGY----PRNLSQAE 92

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY 161
           +LD + ++       D  + LD+  D  + R+  R    E+  +              + 
Sbjct: 93  YLDDITDL-------DVVLYLDVDEDELVGRLTGRRLDPETGDIYHIEYNPAEDEAVKER 145

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRC----------HIVDSAHSFQSVATNILNIVWE 210
             ++D    E  R+  L + R   +              +D   +   V  +I   V E
Sbjct: 146 LVQRDDDTEETVRER-LRVYRENTEPVIEHYEETGELVRIDGEQTPDEVWDDIKETVEE 203


>gi|302813858|ref|XP_002988614.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii]
 gi|300143721|gb|EFJ10410.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii]
          Length = 399

 Score = 55.8 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 49  AARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
             R +L      E    A  I+F+  R +    +    +    +++ DR+  S  A+   
Sbjct: 10  RLRCLLFLGRGAELDDRAVHILFSPNRWEKRLQMENKLMARTTLVV-DRYSYSGVAFSAA 68

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDI 142
           +     L L+  +   V+ +  D  + LD+  + 
Sbjct: 69  KG----LDLEWCKAPEVELLAADLVLYLDISPEE 98


>gi|320156423|ref|YP_004188802.1| hypothetical protein VVM_03048 [Vibrio vulnificus MO6-24/O]
 gi|319931735|gb|ADV86599.1| hypothetical protein VVMO6_01577 [Vibrio vulnificus MO6-24/O]
          Length = 195

 Score = 55.8 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 32/216 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GK+T +  L   L    ++     E             LL    +    E
Sbjct: 3   YITLEGNVGVGKSTLLHRLADEL---GWEAV--EEGIEFDEGF---QTLLKERYENPTPE 54

Query: 66  --AEAIVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A+  ++ A    + +       L   K  + +R + ++  +      ++   +D+L  
Sbjct: 55  NVAKLQLYVANFMAERINE-----LDPNKFYVVERSVFATELFSLAA--NRPDIIDALAG 107

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             ++   P+  + L  P  + L+R+  R    E   +       +   +    I      
Sbjct: 108 HVLRVPAPEFYLYLSAPPRLCLERIHERDRTGEGEGI------SLEYLQTLHDIHERWFN 161

Query: 183 NQP--DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                 R   VD+           +  + E V++RV
Sbjct: 162 MMSMLGRVKRVDAVDYPD------VKRLAEAVRQRV 191


>gi|107021832|ref|YP_620159.1| deoxynucleoside kinase [Burkholderia cenocepacia AU 1054]
 gi|116688779|ref|YP_834402.1| deoxynucleoside kinase [Burkholderia cenocepacia HI2424]
 gi|105892021|gb|ABF75186.1| deoxynucleoside kinase [Burkholderia cenocepacia AU 1054]
 gi|116646868|gb|ABK07509.1| deoxynucleoside kinase [Burkholderia cenocepacia HI2424]
          Length = 228

 Score = 55.8 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKT+   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTSLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   + FA  R      +I  AL  G+ ++ D     +  +           L   + I+
Sbjct: 71  Q---LSFALQRAQQARELI-GALETGRPVIADFMPQKNDIFARLNLPEDEWQLY--RSIA 124

Query: 125 V-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                 Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 125 THVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|296207885|ref|XP_002750841.1| PREDICTED: UMP-CMP kinase-like [Callithrix jacchus]
          Length = 228

 Score = 55.8 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNRTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 223


>gi|300931870|ref|ZP_07147167.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300460293|gb|EFK23786.1| conserved hypothetical protein [Escherichia coli MS 187-1]
          Length = 230

 Score = 55.8 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 50/237 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +       +            +          +D+    + V  +    + + +
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFM 224


>gi|319891527|ref|YP_004148402.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161223|gb|ADV04766.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 207

 Score = 55.8 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 19/163 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EG  G GK++    L      ++Y  +  +E       E          + 
Sbjct: 1   MKKP-FIAIEGPIGVGKSSLAHQL-----SQSYHFYEAKE----IVGENPYLSDFYSDIS 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118
           ++  + E          H     +        ++ D  +  +  +A     D+    F  
Sbjct: 51  KWSFQTEMFFLC-----HRYKDYQDLAEHTDGIVSDYHIYKNKIFARNTLNDTEYDKF-S 104

Query: 119 SLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            + +I  ++++ PD T+ILD  + +  +R+  R    E+   D
Sbjct: 105 RIYDILTEDLISPDFTVILDADLSVLKQRIAKRDRSFEANIQD 147


>gi|323465306|gb|ADX77459.1| deoxynucleoside kinase [Staphylococcus pseudintermedius ED99]
          Length = 207

 Score = 55.8 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 19/163 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+ EG  G GK++    L      ++Y  +  +E       E          + 
Sbjct: 1   MKKP-FIAIEGPIGVGKSSLAHQL-----SQSYHFYEAKE----IVGENPYLSDFYSDIS 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118
           ++  + E          H     +        ++ D  +  +  +A     D+    F  
Sbjct: 51  KWSFQTEMFFLC-----HRYKDYQDLAEHTDGIVSDYHIYKNKIFARNTLNDAEYDKF-S 104

Query: 119 SLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            + +I  ++++ PD T+ILD  + +  +R+  R    E+   D
Sbjct: 105 RIYDILTEDLISPDFTVILDADLSVLKQRIAKRDRSFEANIQD 147


>gi|293416431|ref|ZP_06659070.1| ATP-binding protein yghT [Escherichia coli B185]
 gi|291431787|gb|EFF04770.1| ATP-binding protein yghT [Escherichia coli B185]
          Length = 230

 Score = 55.8 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 60/245 (24%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL--------L 55
            I+  G +G+GK+T    L   +++      VH+     G  A    R V+        L
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHL-----GKQAGNVGRAVVKLPLMGKSL 62

Query: 56  SCGVDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY-- 103
           +  ++    +          A+V  A  AR       +  +   G I+L DR+       
Sbjct: 63  NKSIERNKVKTAKKLPGPVPALVITAFVARRLLRFRHMLASRRRGLIVLTDRYPQDQIPG 122

Query: 104 AYQGER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNR 150
           AY G     +     F+  L          ++     PD  I L++ +++   R     R
Sbjct: 123 AYDGTVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACMRKPDHKR 180

Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            SL     +       +            +          +D+    + V  +    + E
Sbjct: 181 ESLARKIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITE 222

Query: 211 LVQKR 215
            +  R
Sbjct: 223 FMTAR 227


>gi|191167556|ref|ZP_03029368.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|209920462|ref|YP_002294546.1| hypothetical protein ECSE_3271 [Escherichia coli SE11]
 gi|218555560|ref|YP_002388473.1| hypothetical protein ECIAI1_3135 [Escherichia coli IAI1]
 gi|293449335|ref|ZP_06663756.1| ATP-binding protein yghT [Escherichia coli B088]
 gi|300815532|ref|ZP_07095756.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|190902413|gb|EDV62150.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|209913721|dbj|BAG78795.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218362328|emb|CAQ99950.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli IAI1]
 gi|291322425|gb|EFE61854.1| ATP-binding protein yghT [Escherichia coli B088]
 gi|300531461|gb|EFK52523.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|323183575|gb|EFZ68972.1| hypothetical protein ECOK1357_3355 [Escherichia coli 1357]
 gi|323946687|gb|EGB42708.1| yghT protein [Escherichia coli H120]
 gi|324018171|gb|EGB87390.1| hypothetical protein HMPREF9542_03226 [Escherichia coli MS 117-3]
          Length = 230

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANRPLEQVLVDAEKAITDFMTAR 227


>gi|194900074|ref|XP_001979582.1| GG23099 [Drosophila erecta]
 gi|190651285|gb|EDV48540.1| GG23099 [Drosophila erecta]
          Length = 250

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 80/204 (39%), Gaps = 26/204 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT+++      ++   D+ +  EP          ++L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P     K+ + +R + S+ Y +        S +    ++L+E 
Sbjct: 78  MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    V  D  I L    ++  +R++ R    ES     + ++   +HE       
Sbjct: 136 YKFIGESIHVQADLIIYLRTSPEVAHERIKQRARSEESCVPLKYLQELHELHED-----W 190

Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200
            I   +P  C   ++D+  + +++
Sbjct: 191 LIHHRRPQSCKVLVLDADLNLENI 214


>gi|76664774|emb|CAJ17825.1| thymidylate kinase [Candidatus Phytoplasma solani]
          Length = 56

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                 ++     L   E +I P+L++G I+L DR+ DS++AYQ +  +  
Sbjct: 1   SPNTRFLLSLTNMLQTQEELIIPSLLKGYIVLIDRWYDSTFAYQSDDINLD 51


>gi|269114967|ref|YP_003302730.1| Deoxyguanosine kinase [Mycoplasma hominis]
 gi|268322592|emb|CAX37327.1| Deoxyguanosine kinase [Mycoplasma hominis ATCC 23114]
          Length = 219

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 85/220 (38%), Gaps = 14/220 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+  AGK++    L R+ +     +    E          + +         G 
Sbjct: 1   MIIGVSGMIAAGKSSLAEKLHRYFE--GSLMLHEFEEDDEVFNTFLKWLYEGKPNLTIGF 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQ----GERDSSQHLFLD 118
           ++  +   + + + ++     +  +    ++  DRF    Y +      ++        D
Sbjct: 59  QSYIVENHSTKFNKIKEEFEKSKKDPIEDMIFLDRFSIEHYIFAKLILSKKGKRYLDAYD 118

Query: 119 SL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV--MIHEKRRQ 175
           +L +++  ++ +PD  I LD+  +   KR+  R    E    D  E  +    +HE   +
Sbjct: 119 ALFEKLISKDELPDFAIFLDINFETFKKRIFTRGRQSEVDNWD--ENYEYFRNLHENYFK 176

Query: 176 IFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQK 214
           IF +IA+    +  ++D+   + + V    L+I+    +K
Sbjct: 177 IFKEIAQKFGLKYVVIDTNNLTEKEVFNKALDIIESEKEK 216


>gi|311895084|dbj|BAJ27492.1| hypothetical protein KSE_16670 [Kitasatospora setae KM-6054]
          Length = 211

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 24/216 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I  EG++  GKTT    L  +L ++   V   T    G P             +      
Sbjct: 4   IVVEGMDFTGKTTVCRHLAEYLDQQGTTVVRSTTSLTGGPIPALIEAAYRIPHLP--DPV 61

Query: 66  AEAIVFAAARLDHVENVIRP--ALMEGKIL-LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             A+   A   D       P      G+ + L + ++   +A+   R  +       L  
Sbjct: 62  RSALFHLAYLPDLAARPTPPGGHNPAGQQVWLQESYVCRVWAHDLARRQT------VLAR 115

Query: 123 ISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            + + + P      D  ++L  P ++   R   R           F   D   H +  + 
Sbjct: 116 FAAR-LAPTLHRRVDLAVLLHSPHEVRHDR-YLRTGAPNLRDDRRF-GPDADHHRRVEEH 172

Query: 177 FLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211
              +A+      H++ ++       A  I  ++ EL
Sbjct: 173 LTRLAQGFG--YHLIGTSEQPPHESAAQIAALLAEL 206


>gi|311262320|ref|XP_003129123.1| PREDICTED: deoxycytidine kinase-like isoform 2 [Sus scrofa]
          Length = 232

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 34/223 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS EG   AGK+T +++LK+  +   ++V    EP              +    +   E+
Sbjct: 24  ISIEGNIAAGKSTFVNILKQVCED--WEVVP--EPVARWC---------NVQSTQNEFES 70

Query: 67  EAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--- 117
            A + +  R         +++  +P L   + +  DR++ +S  Y+ +  +     +   
Sbjct: 71  YACL-SRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQD 129

Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-----KDVMI 169
             D +     Q +  D  I L    +  L R+  R    E    L+Y E+     +  ++
Sbjct: 130 WHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLL 189

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           H   +  F D  +  P     +D    F+   ++++  V E +
Sbjct: 190 HRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHSSLVEKVKEFL 229


>gi|301325670|ref|ZP_07219131.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|300847525|gb|EFK75285.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|323966517|gb|EGB61950.1| gyghT [Escherichia coli M863]
 gi|323978938|gb|EGB74018.1| gyghT [Escherichia coli TW10509]
 gi|327251770|gb|EGE63456.1| hypothetical protein ECSTEC7V_3622 [Escherichia coli STEC_7v]
          Length = 230

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 75/239 (31%), Gaps = 54/239 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHV-----LLSCG 58
            I+  G +G+GK+T    L   +++      VH+ ++ G      A   +      L   
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGN--VGRAVTKLPLMGKSLHKT 65

Query: 59  VDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQ 106
           +++   +          A+V  A  AR       +      G I+L DR+       AY 
Sbjct: 66  IEKNEVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYD 125

Query: 107 GER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSL 153
           G     +     F+  L          ++     PD  I L++ +++   R     R SL
Sbjct: 126 GTVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESL 183

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                +       +            +          +D+    + V  +    + + +
Sbjct: 184 ARKIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFM 224


>gi|114556431|ref|XP_001163827.1| PREDICTED: cytidylate kinase isoform 2 [Pan troglodytes]
          Length = 228

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + EGKI+       L  R +D + A   +R+           D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQRNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223


>gi|12644008|sp|P30085|KCY_HUMAN RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
 gi|50513735|pdb|1TEV|A Chain A, Crystal Structure Of The Human UmpCMP KINASE IN OPEN
           Conformation
 gi|6563220|gb|AAF17204.1|AF112216_1 UMP-CMP kinase [Homo sapiens]
 gi|10764224|gb|AAG22609.1|AF259961_1 cytidine monophosphate kinase CMP [Homo sapiens]
 gi|33150592|gb|AAP97174.1|AF087865_1 UMP-CMPK [Homo sapiens]
 gi|5730476|gb|AAD48583.1| UMP-CMP kinase [Homo sapiens]
          Length = 196

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 10  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 48  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 155 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 191


>gi|124027036|ref|YP_001012356.1| thymidylate kinase [Hyperthermus butylicus DSM 5456]
 gi|123977730|gb|ABM80011.1| Thymidylate kinase [Hyperthermus butylicus DSM 5456]
          Length = 212

 Score = 55.4 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 36/220 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++F G+ G+GKT+   LL R                  P     R V            
Sbjct: 3   LVAFVGVHGSGKTSTARLLARL----------------YPGCYIYREVEAIGEAAGLPPA 46

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHLFLDSL 120
           A  ++F A  ++ +    R A  +GK ++ D       + + +  +G    +       L
Sbjct: 47  ARQLLFYARFIERLVAAYREARSDGKTVVMDSHPLLVPVYTRWWLRGSGGGAAEAMEKLL 106

Query: 121 QEISVQEVMP--DCTIILDL--PVDIGLK-RVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                  ++P  D  + +    P++I  +   + R + RE A  +Y +  D  +     +
Sbjct: 107 ------LILPPVDLLVYIRARDPLEIARRVLARGRATAREEADPEYIQFIDQEVSRLV-E 159

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +            ++D+    ++ A  +      L + R
Sbjct: 160 AYGARIARH---VLVLDAEAPLEAKARRVHEEYTRLTRGR 196


>gi|300824076|ref|ZP_07104197.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|331669803|ref|ZP_08370648.1| conserved hypothetical protein [Escherichia coli TA271]
 gi|331679060|ref|ZP_08379732.1| conserved hypothetical protein [Escherichia coli H591]
 gi|300523466|gb|EFK44535.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|320201900|gb|EFW76475.1| hypothetical protein ECoL_00525 [Escherichia coli EC4100B]
 gi|331062716|gb|EGI34630.1| conserved hypothetical protein [Escherichia coli TA271]
 gi|331073125|gb|EGI44448.1| conserved hypothetical protein [Escherichia coli H591]
          Length = 230

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +D+   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|156399323|ref|XP_001638451.1| predicted protein [Nematostella vectensis]
 gi|156225572|gb|EDO46388.1| predicted protein [Nematostella vectensis]
          Length = 253

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 74/208 (35%), Gaps = 33/208 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGA 64
           ++ EG  G+GKTT +        RKN +V V  EP          ++L         +  
Sbjct: 36  VAVEGNIGSGKTTLLKYF-----RKNDEVEVIEEPVSKWQNVGGSNLLELFYKDCQRWSF 90

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122
             E+         H      P     K++  +R + S Y Y  E +      + S++   
Sbjct: 91  LFESYALLTLMQIHKRPHTTPI----KMV--ERSVYSGY-YCFEHNLCASGLMASVEHGV 143

Query: 123 ------ISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173
                    ++  P  D  I L    +  ++R++ R    E++  +D        +H++ 
Sbjct: 144 HNDWFTWITEKEQPQLDLIIYLRTTPEKCMERIKQRCRSEETSVSMDLL----KELHDR- 198

Query: 174 RQIFLDIARNQ--PDRCHIVDSAHSFQS 199
            + +L I +    P    IVD   S   
Sbjct: 199 HEAWL-IEKKFPVPAPVVIVDGNRSLDE 225


>gi|7706497|ref|NP_057392.1| UMP-CMP kinase isoform a [Homo sapiens]
 gi|6578133|gb|AAF17709.1|AF070416_1 UMP-CMP kinase [Homo sapiens]
 gi|55960530|emb|CAI13471.1| cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Homo sapiens]
 gi|55962131|emb|CAI14972.1| cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Homo sapiens]
 gi|119627274|gb|EAX06869.1| cytidylate kinase, isoform CRA_a [Homo sapiens]
 gi|119627276|gb|EAX06871.1| cytidylate kinase, isoform CRA_a [Homo sapiens]
 gi|189053406|dbj|BAG35572.1| unnamed protein product [Homo sapiens]
          Length = 228

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223


>gi|281180027|dbj|BAI56357.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 230

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          VD+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------VDANQPLEKVLVDAEKAITDFMTAR 227


>gi|94971773|ref|YP_593821.1| deoxynucleoside kinase [Candidatus Koribacter versatilis Ellin345]
 gi|94553823|gb|ABF43747.1| deoxynucleoside kinase [Candidatus Koribacter versatilis Ellin345]
          Length = 221

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 25/177 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG    GK+T   ++   L+ +        EP            L S    E GA
Sbjct: 9   RYIAVEGPIRVGKSTLAKVVAETLRAQRI-----SEPEDN-------KFLRSFYEGERGA 56

Query: 65  EAEA-IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSL 120
             +A + F   R + +  +  P     K+++ D ++   D  +A     D    ++    
Sbjct: 57  AFQAQMAFLIKRYEQLRALALPK-NPNKVIVSD-YIFEKDKIFASLNLDDMEFDVYDRYY 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +    +  +PD  I L    ++  KR++ + +  E        +      E   Q +
Sbjct: 115 KLFHQEIPVPDLVIYLQASTEVLKKRLKKKNAPGEV-------KVSEEYIEAVNQAY 164


>gi|282174160|ref|YP_003358262.1| ORF123 [Anguillid herpesvirus 1]
 gi|281309003|gb|ADA57886.1| ORF123 [Anguillid herpesvirus 1]
          Length = 263

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 89/266 (33%), Gaps = 52/266 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   LFIS EG  G GK+T ++ L R ++R +  DV            + A +V      
Sbjct: 1   MAHRLFISVEGGIGIGKSTFVNELVRVVERLRGLDVPTNEYDNTPRTVKTALNVKEGHKP 60

Query: 60  DEFGAEAE-------------AIVFAAARLDH------VENVIRPALMEG----KILLCD 96
               A  E                +   + +H      +  +    L       +I+  +
Sbjct: 61  LVMAAIPEPVNLWRNFFGHNVLEEYLKDQDEHTFPFSTLVTMTMFNLHSQHTDARIIFSE 120

Query: 97  RFLDSSYAYQGERDSSQ-HLFLDSLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSL 153
           R   S+     +RD      +   L + ++    + PDC + +    ++   R++ R   
Sbjct: 121 RCPYSNLQVFSKRDVVGMGQYRRRLAQYTMDTLGMKPDCYVYMKADPELIQDRIKKRGRP 180

Query: 154 RESACLDYFERKDV----MIHEKRRQIFLDIARNQPDR-----------CHIVDSAHSFQ 198
            E+      + + +     +HE+       +    P+              +++      
Sbjct: 181 EEAG----IDLEAIKSIHELHER------WLIPATPESATSEAGVRRDDVLVINCNGDVA 230

Query: 199 SVATNILNIVWELVQKRVSPLSSKKD 224
            V  NI  ++  +  K  + L  +K+
Sbjct: 231 EVMKNIPAVLEFIRDKARTKLRLEKE 256


>gi|170732078|ref|YP_001764025.1| deoxynucleoside kinase [Burkholderia cenocepacia MC0-3]
 gi|169815320|gb|ACA89903.1| deoxynucleoside kinase [Burkholderia cenocepacia MC0-3]
          Length = 228

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 26/167 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKT+   LL      +     +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTSLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           +   + FA  R      +I  AL  G+ ++ D      +  Q     ++    +   ++ 
Sbjct: 71  Q---LSFALQRAQQARELI-GALETGRPVIAD------FMPQKNDIFARLNLPEDEWQLY 120

Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                     Q   PD  + L    ++   R+Q R    E    D +
Sbjct: 121 RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|290561613|gb|ADD38206.1| Deoxynucleoside kinase [Lepeophtheirus salmonis]
          Length = 223

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 34/230 (14%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI   EG  G+GK+T +   +        DV +  EP  +    A  ++L    + +   
Sbjct: 10  FIVAVEGNIGSGKSTMLKFFQSK------DVIIDPEPVDSWRNVAGENLL--NNMYKDPP 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAY---QGERDSSQHLFLD-- 118
                  +  +L  ++ +      + KI+  +R + S ++ +     +R +   + L+  
Sbjct: 62  RCSFTFQSYVQLTRLKLLEEHGNEKVKII--ERSIQSNNFVFLETAKKRKTLSDVELEVL 119

Query: 119 -----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI--- 169
                 +Q  ++ + + D  + L    ++   R+Q R    E    LDY +         
Sbjct: 120 GSYHSWIQNHTISKHL-DLIVYLRTLPEVAYCRLQKRARAEERTVPLDYLQDLHDAYEDW 178

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
             K+R  F       P    ++D+  + +SV   +L+   + +  R  PL
Sbjct: 179 LMKKRHGF------PPAPVLVIDANQNIESV-EKLLSQNRDAILGRHRPL 221


>gi|193699895|ref|XP_001951473.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial-like [Acyrthosiphon pisum]
          Length = 390

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 51/175 (29%), Gaps = 21/175 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62
             I  EG  G GKT     L   L                      R +   L      F
Sbjct: 65  KLIVLEGPVGIGKTAVGHQLADLLGMHFMPDITMDAYYINDYGYDMRKLDPQLPVNCRSF 124

Query: 63  GAEAEAIV---FAAA---------RLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---- 106
                      F AA         R  H  + I   L  G+ ++ +R   S +A+     
Sbjct: 125 DERNFLENPEHFNAASFQIIKYKLRYAHYIDAIAHLLNTGEGVIIERSPYSDFAFVEAMY 184

Query: 107 --GERDSSQHLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                  +       L + ++ +++ P   + LD PV   L+ V+ R    E   
Sbjct: 185 KCKYMSKAAREMYYILYKHAMPDLLHPHLVVYLDAPVPRLLELVKERKLPHEVNS 239


>gi|23821758|sp|Q9DBP5|KCY_MOUSE RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
 gi|12836302|dbj|BAB23595.1| unnamed protein product [Mus musculus]
          Length = 196

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 10  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 48  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L+  +       +  +   +D++ S   V   ++ I
Sbjct: 155 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 191


>gi|307202760|gb|EFN82051.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial [Harpegnathos saltator]
          Length = 427

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 52/176 (29%), Gaps = 23/176 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             I  EG   + K      L   L           E   T      R +           
Sbjct: 81  KIIVIEGPMTSNKAKLGQKLADELDMIYLPSPNFDEYYITNYGYDLRTLDDRLSIGAQSC 140

Query: 54  ----LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--- 106
                L+          +   F   + D     +   L  G+ ++ +R   SS+ +    
Sbjct: 141 DLKKFLTNPHHPNVPMFQLHYFQL-KYDQYITALLHLLCTGQGVILNRSFYSSFVFAQAM 199

Query: 107 ---GERDSSQHLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESAC 158
              G        F + +  ++   VM P   I LDLPVD+  +R++ R    E   
Sbjct: 200 TNAGYMRPQALRFYNKVVGMAEDAVMRPHLVIYLDLPVDVVQERIKKRGIPYEVNS 255


>gi|226875210|gb|ACO88953.1| cytidine monophosphate kinase 1, cytosolic (predicted) [Dasypus
           novemcinctus]
          Length = 228

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A +  R    +              
Sbjct: 42  GGPGAGKGTQCTRIVEK-----------YGYTHLSAGDLLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYA--YQGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMASNAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R         +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVAFVLFFDCNNEICIERCLERGKSSGRTDDNR---ESL---EKRIQT 186

Query: 177 FLD----IARNQPD--RCHIVDSAHSFQSVATNILNI 207
           +L     I     +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYKEMGKVKKIDASKSVDEVFDEVVKI 223


>gi|255629041|gb|ACU14865.1| unknown [Glycine max]
          Length = 237

 Score = 55.4 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 57/213 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + + +      Y            A +  R  + S   +          
Sbjct: 27  GGPGSGKGTQCANIVQNF---GY--------THLSAGDLLRAEIKSGSENG--------- 66

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 67  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 110

Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +    + P   +  D P +   +R+ +R   RE   ++   ++  +  E      
Sbjct: 111 NRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVI 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
             +     +   + H +D+A   + V   +  I
Sbjct: 171 NYY-----DAKGKVHKIDAARPIEEVFETVKAI 198


>gi|303244020|ref|ZP_07330359.1| signal recognition particle-docking protein FtsY
           [Methanothermococcus okinawensis IH1]
 gi|302485672|gb|EFL48597.1| signal recognition particle-docking protein FtsY
           [Methanothermococcus okinawensis IH1]
          Length = 271

 Score = 55.0 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ L   L+ K Y V +    G T  A A     L       G   
Sbjct: 67  IVFVGINGTGKTTSIAKLAHKLKNKGYSVVLAA--GDTFRAGAIEQ--LEEHAKNIGVRV 122

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A   G  ++L D            R ++    +D +++  V
Sbjct: 123 IKHQKGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNINLMDEIKK-VV 172

Query: 126 QEVMPDCTII 135
           +   PD  + 
Sbjct: 173 RVTKPDLVVF 182


>gi|170680580|ref|YP_001745251.1| hypothetical protein EcSMS35_3271 [Escherichia coli SMS-3-5]
 gi|170518298|gb|ACB16476.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
          Length = 230

 Score = 55.0 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +++    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------INANQPLEQVLVDAEKAIMDFMTAR 227


>gi|307102652|gb|EFN50922.1| hypothetical protein CHLNCDRAFT_141713 [Chlorella variabilis]
          Length = 222

 Score = 55.0 bits (132), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 49/213 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + L +        V          A +  R  + S   +          
Sbjct: 47  GGPGSGKGTQSARLVQEF-----GVVHLS------AGDLLREHMKSGSPEG--------- 86

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL------DSLQEIS 124
                   V ++I+     G+I+     +  S   +   DS +H FL      +     S
Sbjct: 87  ------QMVADMIK----NGQIVPS--HVTISLLQKAMDDSGKHKFLIDGFPRNEENRAS 134

Query: 125 VQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178
            +    +MPD  +  D P ++  +R+  R   R    ++   ++  +  +      Q + 
Sbjct: 135 FESQTGIMPDLVLFFDCPEEVMERRLLGRNEGRTDDNIETIRKRFKVFIDSSLPVIQHYE 194

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +      +   +++    + +   +  +  EL
Sbjct: 195 AL-----GKVARINADRDTEEIYKEVRRLFMEL 222


>gi|260878748|ref|ZP_05891103.1| deoxyguanosine kinase, (dGK) [Vibrio parahaemolyticus AN-5034]
 gi|308091235|gb|EFO40930.1| deoxyguanosine kinase, (dGK) [Vibrio parahaemolyticus AN-5034]
          Length = 195

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GK+T +  L   L    ++     E         +   LL    +    E
Sbjct: 3   YITLEGNVGVGKSTLLHRLADEL---GWEAV--EEGIEFDEGFQS---LLKERYENPTPE 54

Query: 66  --AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             A+  ++ A     +   I  +L   K  + +R + ++  +      ++   +D+L   
Sbjct: 55  NVAKLQLYVANF---MAERIN-SLDPNKYYVVERSVFATELFSLAA--NRPDIIDALAGH 108

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEK 172
            ++   P+  + L  P  + L+R+  R    E     L+Y  +    IHE+
Sbjct: 109 VLRVPAPEFYLYLSAPPRLCLERIHERDRTGEGEGISLEYL-QTLHDIHER 158


>gi|302875810|ref|YP_003844443.1| hypothetical protein Clocel_2987 [Clostridium cellulovorans 743B]
 gi|302578667|gb|ADL52679.1| hypothetical protein Clocel_2987 [Clostridium cellulovorans 743B]
          Length = 297

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 18/149 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           M +   I  EG+ G+GK+T   ++  +L+++  +     E       +       S    
Sbjct: 17  MKA-KLIVIEGLPGSGKSTISEMVYEYLRQRGINAEFYSESSYDHPVDFDGVAYFSNEKF 75

Query: 60  ---DEFGAEAEAIVFAAARLDHVENVI--RPALMEGKILLCDRFLDSSY-------AYQG 107
              ++     + ++       H   +I  R  + E KI     F DS +        YQ 
Sbjct: 76  MVLEQKHLSHKELLNKIKVNFHQRYLIPYRKVIEEQKI----SFQDSLFKDITKSDVYQL 131

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIIL 136
             +  + + +    +     +  D   I 
Sbjct: 132 PIELHKTIMIKRWNDFVNNHINEDKVFIF 160


>gi|225850756|ref|YP_002730990.1| adenylate kinase (ATP-AMP transphosphorylase) [Persephonella marina
           EX-H1]
 gi|225645320|gb|ACO03506.1| adenylate kinase (ATP-AMP transphosphorylase) [Persephonella marina
           EX-H1]
          Length = 206

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 48/224 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T    L      K +    T         +  R  +      E G +A+ 
Sbjct: 7   FLGPPGAGKGTQAQRLVE---EKGFVQLST--------GDILREAVKKG--TELGKKAKE 53

Query: 69  IVFAAARL--DHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A   +  D +  +I   L E  GK ++ D F          R   Q   LD +    
Sbjct: 54  YMEAGKLVPDDLIIAIIEEKLKELEGKDIILDGF---------PRTIPQAEALDRMLPAV 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------------RKDV--MIH 170
            + +  D  I+ DL  +  L+R+  R    ++  + + E            R+D    + 
Sbjct: 105 GRTL--DKVILFDLSDEEILRRLTGRRVDPKTGKVYHIEFNPPPEGVEVIQREDDREEVI 162

Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208
            KR +++              ++  +VD++ S   V   IL+++
Sbjct: 163 RKRLEVYHQQTAPLIEYYRNQNKLFVVDASKSPDEVYKEILSVI 206


>gi|192360781|ref|YP_001980910.1| putative deoxypurine kinase [Cellvibrio japonicus Ueda107]
 gi|190686946|gb|ACE84624.1| predicted deoxypurine kinase [Cellvibrio japonicus Ueda107]
          Length = 227

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 16/171 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI+ EG  G GKTT    L +     NYD  +  +P   P  E                
Sbjct: 19  RFIAVEGCIGVGKTTLARNLAQLF---NYDTLL-EQPEQNPFLE---RFYRDPKSTALPT 71

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +   + F   R + + ++ +  L E   +   L D   D  +A     D    ++     
Sbjct: 72  Q---LFFLFQRANQIHSLRQNDLFEPVRVADFLID--KDQLFARVTLDDDEFAIYRQVYD 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171
           ++ +    PD  I L  P+++   R++ R    E     DY +  +    E
Sbjct: 127 KLVIDAPRPDLVIYLQAPLNVLGDRIRQRGIAAEQYISQDYLQALNDAYTE 177


>gi|13357642|ref|NP_077916.1| deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762265|ref|YP_001752166.1| deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171920384|ref|ZP_02931712.1| deoxyguanosine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|183508647|ref|ZP_02958146.1| deoxyguanosine kinase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701763|ref|ZP_02971447.1| deoxyguanosine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|11356835|pir||E82935 deoxyguanosine kinase UU086 [imported] - Ureaplasma urealyticum
 gi|6899038|gb|AAF30491.1|AE002108_4 deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827842|gb|ACA33104.1| deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171902818|gb|EDT49107.1| deoxyguanosine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|182676113|gb|EDT88018.1| deoxyguanosine kinase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701037|gb|EDU19319.1| deoxyguanosine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 232

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 29/224 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I+F      GK+T    L    Q  N  V+   E       +    +LL+   +  
Sbjct: 25  GGM-IAF------GKSTLAQALHEKYQPSNV-VYEMVE------GDKLMDLLLAKMYERE 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL 120
                  +F    + +     +       + + DR  F D  +A+      S   + D L
Sbjct: 71  NNVLFGSLFQLYFVLNRFANYKNNCNRKSLTIFDRSIFEDWLFAHANIDKPSVFSYYDGL 130

Query: 121 QEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +   +E+     +P   +ILD   ++  +R+  R    E       E       ++  +
Sbjct: 131 WQGVCKELIYEHGVPKLYVILDGDWELFKERIFKRNRKVEIDNFSINE----TYFKRLLE 186

Query: 176 IFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++ +    + ++      ++D+ +S +     +  I+ +L  ++
Sbjct: 187 MYKNYMVNVCKDFGINYVVLDANNSVEQNVDEVTKILQKLENEQ 230


>gi|302318903|ref|NP_001180547.1| UMP-CMP kinase [Macaca mulatta]
          Length = 228

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223


>gi|15928999|gb|AAH14961.1| Cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Homo sapiens]
 gi|62897589|dbj|BAD96734.1| UMP-CMP kinase variant [Homo sapiens]
 gi|123982796|gb|ABM83139.1| cytidylate kinase [synthetic construct]
 gi|123997465|gb|ABM86334.1| cytidylate kinase [synthetic construct]
 gi|123997467|gb|ABM86335.1| cytidylate kinase [synthetic construct]
 gi|261860680|dbj|BAI46862.1| cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [synthetic
           construct]
          Length = 228

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + EGKI+       L  R +D + A   +++           D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223


>gi|307689244|ref|ZP_07631690.1| hypothetical protein Ccel74_13889 [Clostridium cellulovorans 743B]
          Length = 320

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 18/149 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           M +   I  EG+ G+GK+T   ++  +L+++  +     E       +       S    
Sbjct: 40  MKA-KLIVIEGLPGSGKSTISEMVYEYLRQRGINAEFYSESSYDHPVDFDGVAYFSNEKF 98

Query: 60  ---DEFGAEAEAIVFAAARLDHVENVI--RPALMEGKILLCDRFLDSSY-------AYQG 107
              ++     + ++       H   +I  R  + E KI     F DS +        YQ 
Sbjct: 99  MVLEQKHLSHKELLNKIKVNFHQRYLIPYRKVIEEQKI----SFQDSLFKDITKSDVYQL 154

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIIL 136
             +  + + +    +     +  D   I 
Sbjct: 155 PIELHKTIMIKRWNDFVNNHINEDKVFIF 183


>gi|193067253|ref|ZP_03048221.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|192959210|gb|EDV89645.1| conserved hypothetical protein [Escherichia coli E110019]
          Length = 230

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTMCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAIMDFMTAR 227


>gi|71662282|ref|XP_818150.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70883384|gb|EAN96299.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 261

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 55/171 (32%), Gaps = 22/171 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N    I  EGI+G GK+     L   L        + R P             LS   + 
Sbjct: 49  NQKTLIVLEGIDGVGKSLVAQSLIEKL---GDSAVLIRTPHPD----------LSGIRET 95

Query: 62  FGAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117
           F A+ E  A  F +A           A  E K ++ DR+  S+ A               
Sbjct: 96  FRAQTEETARAFYSAANYLAAWDAFHATKERKFVVFDRWWCSTCAMALANSCRLAALPAA 155

Query: 118 -DSLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            D++ +      +P   +  +L +   I   R++ R            +++
Sbjct: 156 GDAVYQWPQD--LPPFQLGALLYVEEHIRQARIRQRAPEDAEERRLRAQQE 204


>gi|256024428|ref|ZP_05438293.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia sp. 4_1_40B]
          Length = 230

 Score = 55.0 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPFMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +D+   R     R SL  
Sbjct: 128 VFPPNIEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLIDAEKAITDFMTAR 227


>gi|293412364|ref|ZP_06655087.1| ATP-binding protein yghT [Escherichia coli B354]
 gi|291469135|gb|EFF11626.1| ATP-binding protein yghT [Escherichia coli B354]
          Length = 230

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +D+   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|322494227|emb|CBZ29524.1| putative RNA guanylyltransferase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 684

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 69/209 (33%), Gaps = 47/209 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    +       +       + G  P AE  + V      D FG +A+   
Sbjct: 140 GCRGSGKTTQAESIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KDNFGPDAK--- 191

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R              G  ++ DRF+          +   +    +L     Q  +P
Sbjct: 192 ---DRSY-----------NG--VVLDRFV-------ATGEMDAYYLQAALN--VCQLPVP 226

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188
                L +    GL+R Q R   +  A    +  +R    I ++    +  I        
Sbjct: 227 -LVFWLQVDPKEGLRRAQCRGDQKAGADHWRYVEQRAQAEIADRV---YKKI-----GVL 277

Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215
           HI+D     ++  V   I +I+  L  KR
Sbjct: 278 HIIDCNA-LEARRVGDRICSIIDGLFPKR 305


>gi|157873906|ref|XP_001685452.1| RNA guanylyltransferase [Leishmania major strain Friedlin]
 gi|68128524|emb|CAJ08656.1| putative RNA guanylyltransferase [Leishmania major strain Friedlin]
          Length = 692

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 47/209 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    +       +       + G  P AE  + V      D FG +A+   
Sbjct: 148 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KDNFGPDAK--- 199

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R                ++L DRF+          +   +    +L     Q  +P
Sbjct: 200 ---DRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--VCQLPVP 234

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188
                L +    GL+R Q+R   +  A    +  +R    I ++    +  I        
Sbjct: 235 -LVFWLQVDPKEGLRRAQSRGDQKAGADHWRYVEQRAQAEIADRV---YKKI-----GVL 285

Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215
           H++D     ++  V   I +I+  L  KR
Sbjct: 286 HVIDCNA-LEARRVGDRIYSIIDGLFPKR 313


>gi|194764805|ref|XP_001964519.1| GF23227 [Drosophila ananassae]
 gi|190614791|gb|EDV30315.1| GF23227 [Drosophila ananassae]
          Length = 249

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 81/204 (39%), Gaps = 27/204 (13%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT++     + ++ N DV +  EP          ++L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLK----YFEKFN-DVCLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 76

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P   + K+ + +R + S+ Y +        S +    ++L E 
Sbjct: 77  MPFQSYVTLTMLQSHTAP--TDKKLKIMERSIFSARYCFVENMRRNGSLEDGMYNTLTEW 134

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    +  D  I L    ++  +R++ R    ES     + ++   +HE       
Sbjct: 135 YKFIDESIHIQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHED-----W 189

Query: 179 DIARNQPDRCHIV--DSAHSFQSV 200
            I   +P  C ++  D+  + +++
Sbjct: 190 LIYHRRPQACKVIVLDADLNLENI 213


>gi|109087285|ref|XP_001092713.1| PREDICTED: UMP-CMP kinase-like isoform 1 [Macaca mulatta]
          Length = 228

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 65/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + EGKI+       L  R +D + A    ++           D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAHKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R     S+  +  E       EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGSSDDNR-ESS-----EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223


>gi|57640273|ref|YP_182751.1| putative kinase [Thermococcus kodakarensis KOD1]
 gi|68568745|sp|Q5JG26|KAD6_PYRKO RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|57158597|dbj|BAD84527.1| predicted nucleotide kinase, related to CMP and AMP kinases
           [Thermococcus kodakarensis KOD1]
          Length = 177

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 67/214 (31%), Gaps = 55/214 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G GKTT   LL   L    Y+    R+          +   L   VDE   
Sbjct: 1   MIIAVTGTPGVGKTTISKLLAEKL---GYEYVNLRDYALEKGIGEMKENELEIDVDEL-- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                       +      +     GK ++ D  L                         
Sbjct: 56  -----------REAFGRDFK-----GKNVVADGHL------------------------- 74

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              +  D  I+L     +  +R++ R   RE    +  E + V +        L  A  +
Sbjct: 75  SHFLKADLVIVLRANPKLIAERLKERGYGREKLGEN-VEAELVDVI-------LVEALEE 126

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
            +    VD+   + + V   ILN++   V++RV 
Sbjct: 127 NENVIEVDTTGKTPEEVVEEILNLIRRGVKRRVG 160


>gi|297665010|ref|XP_002810903.1| PREDICTED: UMP-CMP kinase-like isoform 1 [Pongo abelii]
          Length = 228

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 65/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  S +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCSRIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223


>gi|61368998|gb|AAX43269.1| UMP-CMP kinase [synthetic construct]
          Length = 229

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + EGKI+       L  R +D + A   +++           D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223


>gi|71043752|ref|NP_001020826.1| UMP-CMP kinase [Rattus norvegicus]
 gi|68534162|gb|AAH98727.1| Cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Rattus
           norvegicus]
 gi|149035644|gb|EDL90325.1| cytidylate kinase [Rattus norvegicus]
          Length = 227

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 41  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 79  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I + R   R      +  +    + +   EKR Q 
Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIDRCLERGKSSGRSDDNR---ESL---EKRIQT 185

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L+  +       +  +   +D++ S   V  +++ I
Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGDVMKI 222


>gi|297808663|ref|XP_002872215.1| uridylate kinase [Arabidopsis lyrata subsp. lyrata]
 gi|297318052|gb|EFH48474.1| uridylate kinase [Arabidopsis lyrata subsp. lyrata]
          Length = 202

 Score = 55.0 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 57/220 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        Y            A +  R  + S   +          
Sbjct: 21  GGPGSGKGTQCAYIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 60

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 61  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAIQENGNDKFLIDGFPRNEE 104

Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +   E+ P   +  D P +   KR+  R   RE   ++   ++  +  E      
Sbjct: 105 NRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVI 164

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           Q +         +   +++A   ++V   +  I     +K
Sbjct: 165 QYY-----EAKGKVRKINAAKPIEAVFEEVKAIFSPEAEK 199


>gi|86740517|ref|YP_480917.1| thymidylate kinase-like protein [Frankia sp. CcI3]
 gi|86567379|gb|ABD11188.1| Thymidylate kinase-like [Frankia sp. CcI3]
          Length = 204

 Score = 54.6 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 8/102 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ EG   +GKTT    L    + +   V    EP           +++    + F  E 
Sbjct: 8   VAVEGTHASGKTTLTHALAAHFRERGVHVACVPEPARNSP--FIEEIVVHGRGE-FDLET 64

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
           E  +FAA     + + +R A  +  +++CD+ + +  AY   
Sbjct: 65  EVDLFAA----QLSSQLRVA-RQHTMIICDKTIANVLAYAWL 101


>gi|167950692|ref|ZP_02537766.1| hypothetical protein Epers_31521 [Endoriftia persephone
          'Hot96_1+Hot96_2']
          Length = 40

 Score = 54.6 bits (131), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
            G FI+ EG EGAGK++++  +++ L+ +   V  T
Sbjct: 4  KQGRFITVEGGEGAGKSSNLDFIRQQLEAQGKQVLFT 40


>gi|195053512|ref|XP_001993670.1| GH20975 [Drosophila grimshawi]
 gi|193895540|gb|EDV94406.1| GH20975 [Drosophila grimshawi]
          Length = 408

 Score = 54.6 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 24/226 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             I  EG   AGKT     L   L  + Y           P     R +           
Sbjct: 84  KVICVEGPIAAGKTKFAQELAAELDMQYYPAVDLDLIYINPYGYDMRKLDPELPPSCRSY 143

Query: 54  -LLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
            +     +     A          R     + ++  L  G+ ++ +R   S + +     
Sbjct: 144 DVRDFCKNPNHDLAALFQIRMYMLRYSQYVDALQHILSTGQGVVLERSPYSDFVFMEAMF 203

Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
            QG          + L++ ++ E+  P   I LD P++   ++++ R    E     + E
Sbjct: 204 RQGYISRGARSVYNELRQNTIGELLKPHLVIYLDQPIEAVQRQIKTRNLEHEVKSKVFSE 263

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
                +    +Q +L       +   I D  +    + V  +I  I
Sbjct: 264 AYLRDLESLYKQQYLKDIVGHAE-LLIYDWTAGGETEVVVEDIERI 308


>gi|195978930|ref|YP_002124174.1| deoxyguanosine kinase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975635|gb|ACG63161.1| deoxyguanosine kinase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 213

 Score = 54.6 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 51/234 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     +V         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117
           +  A +     L+     I+ A      +L DR +       +  Y+    +   L +  
Sbjct: 47  KKYAFLLQIFFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQ 105

Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167
               + L+E+  + +  PD  I +D+  +  L+R++ R           FE+ D      
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFEKMLERIEKRGR--------RFEQVDDNPDLE 157

Query: 168 MIHEKRRQIF---LDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
             + +    +    +     P     +D        + + +AT +L ++ E ++
Sbjct: 158 AYYHQVHGEYPTWYERYDVSPK--MRIDGNKLDFVQNPEDLAT-VLQMIDEKLK 208


>gi|330686249|gb|EGG97861.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU121]
          Length = 202

 Score = 54.6 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 63/164 (38%), Gaps = 21/164 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI+ EG  G GK++    L + L        V   P  +   +            
Sbjct: 1   MNKP-FIAIEGPIGVGKSSLAHKLSQSLDFYEEKEIVDENPFLSDFYDDI---------S 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS- 119
           ++  + E + F   R    +++   +L +G  ++ D  +  +  +   +++      +  
Sbjct: 51  KWSFQTE-MFFLCNRYKQFKDI--ESLHKG--IVSDYHIYKNKIF--AKNTLDRHEFNKF 103

Query: 120 --LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             + +I  +++ MP+  I LD  +D+   R+  R    E    D
Sbjct: 104 SRIYDILTEDLTMPNTIIFLDAELDVLKHRIAKRNRSFEHQIED 147


>gi|217075148|gb|ACJ85934.1| unknown [Medicago truncatula]
          Length = 208

 Score = 54.6 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 49/209 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 28  GGPGSGKGTQCANVVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 67

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL------DSLQEIS 124
                      +I+  + EGKI+  +  +      Q  +D+    FL      +     +
Sbjct: 68  ----------TMIQNMIKEGKIVPSE--VTIRLLQQAIKDNGNDKFLIDGFPRNEENRAA 115

Query: 125 VQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178
            +    + P   +  D P +   +R+ +R   RE   ++   ++  +  +        + 
Sbjct: 116 FERVTGIEPAFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLDSSLPVINYY- 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207
               +   +   VD+A   + V  ++  I
Sbjct: 175 ----DAKGKVRKVDAARPVEEVFESVKAI 199


>gi|160902235|ref|YP_001567816.1| nucleoside-triphosphate--adenylate kinase [Petrotoga mobilis SJ95]
 gi|189028358|sp|A9BFZ7|KAD_PETMO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|160359879|gb|ABX31493.1| Nucleoside-triphosphate--adenylate kinase [Petrotoga mobilis SJ95]
          Length = 215

 Score = 54.6 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 49/228 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    + +  Q     VH+          +  R  +      E G  A+AI+
Sbjct: 7   GPPGAGKGTQAKKVAQEFQI----VHI-------STGDILRDAV--SKGTELGKMAKAIM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R + V + I  +L++ ++   D F+   Y     R   Q  FLD   +   +E+  
Sbjct: 54  ---DRGELVSDEIMNSLVKERLEELDSFILDGY----PRTLDQAKFLDQATKELQKEI-- 104

Query: 131 DCTIILDLPVDIGLKRVQNRY--------------SLRESACLD----YFERKDVMIHEK 172
           D  +++D+  +  +KR+ NR                 +E    D       ++D    E 
Sbjct: 105 DAAVLIDVSEEEIVKRISNRRVCPNCGKVYNLITLQPKEDEKCDVCGTKLIQRDDDKEEV 164

Query: 173 RRQIFLDIARN-QP--------DRCHIVDSAHSFQSVATNILNIVWEL 211
            R+ +    +N +P        ++   +D A + + V   + NI+   
Sbjct: 165 VRERYKVYKKNTEPVIEYYRKNNKIITIDGAQNVEDVTKELFNILRSF 212


>gi|185177722|pdb|2ZI4|A Chain A, C4s Dck Variant Of Dck In Complex With L-Da+adp
 gi|185177723|pdb|2ZI5|A Chain A, C4s Dck Variant Of Dck In Complex With L-Da+udp
 gi|185177724|pdb|2ZI5|B Chain B, C4s Dck Variant Of Dck In Complex With L-Da+udp
 gi|185177725|pdb|2ZI5|C Chain C, C4s Dck Variant Of Dck In Complex With L-Da+udp
 gi|185177726|pdb|2ZI5|D Chain D, C4s Dck Variant Of Dck In Complex With L-Da+udp
 gi|185177727|pdb|2ZI6|A Chain A, C4s Dck Variant Of Dck In Complex With D-Da+udp
 gi|185177728|pdb|2ZI6|B Chain B, C4s Dck Variant Of Dck In Complex With D-Da+udp
 gi|185177729|pdb|2ZI6|C Chain C, C4s Dck Variant Of Dck In Complex With D-Da+udp
 gi|185177730|pdb|2ZI6|D Chain D, C4s Dck Variant Of Dck In Complex With D-Da+udp
 gi|193885263|pdb|2ZI7|B Chain B, C4s Dck Variant Of Dck In Complex With D-Dg+udp
 gi|193885264|pdb|2ZI7|A Chain A, C4s Dck Variant Of Dck In Complex With D-Dg+udp
 gi|193885267|pdb|2ZIA|A Chain A, C4s Dck Variant Of Dck In Complex With Cladribine+udp
 gi|193885268|pdb|2ZIA|B Chain B, C4s Dck Variant Of Dck In Complex With Cladribine+udp
 gi|301598591|pdb|3MJR|A Chain A, Human Dck Complex With Acyclic Nucleoside
 gi|301598592|pdb|3MJR|B Chain B, Human Dck Complex With Acyclic Nucleoside
 gi|301598593|pdb|3MJR|C Chain C, Human Dck Complex With Acyclic Nucleoside
 gi|301598594|pdb|3MJR|D Chain D, Human Dck Complex With Acyclic Nucleoside
 gi|306991646|pdb|3KFX|A Chain A, Human Dck Complex With 5-Me Dc And Adp
 gi|306991647|pdb|3KFX|B Chain B, Human Dck Complex With 5-Me Dc And Adp
          Length = 279

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    V R        +    +         +
Sbjct: 43  ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNV 100

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 101 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 160

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 276


>gi|134104939|pdb|2NO9|A Chain A, The Structure Of Deoxycytidine Kinase Complexed With
           Troxacitabine And Adp.
 gi|134104940|pdb|2NO9|B Chain B, The Structure Of Deoxycytidine Kinase Complexed With
           Troxacitabine And Adp.
 gi|134104941|pdb|2NOA|A Chain A, The Structure Of Deoxycytidine Kinase Complexed With
           Lamivudine And Adp.
 gi|134104942|pdb|2NOA|B Chain B, The Structure Of Deoxycytidine Kinase Complexed With
           Lamivudine And Adp.
 gi|151567752|pdb|2NO0|A Chain A, C4s Dck Variant Of Dck In Complex With Gemcitabine+adp
 gi|151567753|pdb|2NO0|B Chain B, C4s Dck Variant Of Dck In Complex With Gemcitabine+adp
 gi|151567754|pdb|2NO1|A Chain A, C4s Dck Variant Of Dck In Complex With D-Dc+adp
 gi|151567755|pdb|2NO1|B Chain B, C4s Dck Variant Of Dck In Complex With D-Dc+adp
 gi|151567756|pdb|2NO6|A Chain A, C4s Dck Variant Of Dck In Complex With Ftc+adp
 gi|151567757|pdb|2NO6|B Chain B, C4s Dck Variant Of Dck In Complex With Ftc+adp
 gi|151567758|pdb|2NO7|A Chain A, C4s Dck Variant Of Dck In Complex With L-Dc+adp
 gi|151567759|pdb|2NO7|B Chain B, C4s Dck Variant Of Dck In Complex With L-Dc+adp
          Length = 280

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    V R        +    +         +
Sbjct: 44  ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNV 101

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 102 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 161

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 162 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 221

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 222 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 277


>gi|331654597|ref|ZP_08355597.1| conserved hypothetical protein [Escherichia coli M718]
 gi|331047979|gb|EGI20056.1| conserved hypothetical protein [Escherichia coli M718]
          Length = 230

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACMRKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|297292758|ref|XP_001093411.2| PREDICTED: deoxycytidine kinase [Macaca mulatta]
          Length = 260

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKNGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L+  + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLLFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P    I+D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTDF-DYLQEVP--ILILDVNEDFKDKHESLVEKVKEFL 257


>gi|301017319|ref|ZP_07182083.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300400292|gb|EFJ83830.1| conserved hypothetical protein [Escherichia coli MS 69-1]
          Length = 230

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +     F+  L          ++     PD  I L++ +D+   R        +  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVSLDVACAR----KPDHKRE 181

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            L+      + I  +       +          +D+    + V  +    + + +  R
Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227


>gi|146096485|ref|XP_001467822.1| RNA guanylyltransferase [Leishmania infantum JPCM5]
 gi|134072188|emb|CAM70889.1| putative RNA guanylyltransferase [Leishmania infantum JPCM5]
          Length = 1105

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 70/209 (33%), Gaps = 47/209 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    +       +       + G  P AE  + V      D FG +A+   
Sbjct: 561 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KDNFGPDAK--- 612

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R                ++L DRF+          +   +    +L     Q  +P
Sbjct: 613 ---DRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--VCQLPVP 647

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188
                L +    GL+R Q+R   +  +    +  +R    I ++    +  I        
Sbjct: 648 -LVFWLQVDPKEGLRRAQSRGDQKAGSDHWRYVEQRAQAEIADRV---YKKI-----GVL 698

Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215
           H++D     ++  V   I +I+  L  KR
Sbjct: 699 HVIDCNA-LEARRVGDRIYSIIDGLFPKR 726


>gi|34497089|ref|NP_901304.1| deoxyguanosine kinase [Chromobacterium violaceum ATCC 12472]
 gi|34102946|gb|AAQ59310.1| deoxyguanosine kinase [Chromobacterium violaceum ATCC 12472]
          Length = 211

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 26/182 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGV 59
           M+   ++  EG  G+GK++    L  +     + V +  E P   P              
Sbjct: 1   MSQLRYVVVEGPIGSGKSSLARRLSEY-----WGVQLKAEDPAANPFLPRFYR------N 49

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLF 116
               A +  + F   R D    +I   L    ++  D FL   D+ +A     D  +   
Sbjct: 50  MPAHALSTQLSFLLQRADIAREMISGELQAAPLV-SD-FLFEKDALFAR-LNLDEHELAI 106

Query: 117 LDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
              L  +++ E  +PD  I L    DI L+RV  R    E    +          ++   
Sbjct: 107 YQRLARLALPEYPVPDLVIYLQASEDILLQRVAARAVDYEVNFPE-------GYLKRVHA 159

Query: 176 IF 177
            +
Sbjct: 160 GY 161


>gi|185177720|pdb|2ZI3|A Chain A, C4s-E247a Dck Variant Of Dck In Complex With D-Da+adp
 gi|185177721|pdb|2ZI3|B Chain B, C4s-E247a Dck Variant Of Dck In Complex With D-Da+adp
 gi|193885265|pdb|2ZI9|A Chain A, C4s-E247a Dck Variant Of Dck In Complex With
           Cladribine+adp
 gi|193885266|pdb|2ZI9|B Chain B, C4s-E247a Dck Variant Of Dck In Complex With
           Cladribine+adp
          Length = 279

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    V R        +    +         +
Sbjct: 43  ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNV 100

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 101 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 160

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYASLVEKVKEFL 276


>gi|86130741|ref|ZP_01049340.1| 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
           (HPPK)/deoxynucleoside kinase [Dokdonia donghaensis
           MED134]
 gi|85818152|gb|EAQ39312.1| 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
           (HPPK)/deoxynucleoside kinase [Dokdonia donghaensis
           MED134]
          Length = 372

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 32/196 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  +++      K   + + R        +             F  E
Sbjct: 178 YIAIEGNIGAGKTSLATMISEEFNAK---LILERFKDNAFLPKF----YKDPDRFAFPLE 230

Query: 66  AEAIVFAAARLDHVENVI------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                F A R   + + I      +  +        DR+    +A Q      +++    
Sbjct: 231 MS---FLADRYQQLLDDIGQFDLFKDFMCADY----DRYKSLIFA-QVTLQEEEYVLYKR 282

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
           L E+  ++   PD  + L    +  LK ++ R    E +   +Y E        K  Q +
Sbjct: 283 LHEMMYKDMPQPDLYVYLYQNTERLLKNIKKRGRSYEKSIAPEYLE--------KINQGY 334

Query: 178 LDIARNQPD-RCHIVD 192
           LD  + Q +    I+D
Sbjct: 335 LDFIKGQHNLNVKIID 350


>gi|225711582|gb|ACO11637.1| Deoxynucleoside kinase [Caligus rogercresseyi]
          Length = 255

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 32/215 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  GAGKTT +  +K F       V  T EP         ++ LL    +    + 
Sbjct: 36  IVVEGNIGAGKTTFLQNIKDFSPPDLIHV--TDEPVLEWKTYKGKYDLLDMMYE--DPKK 91

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSL 120
            + +F       +    +  +    I L +R    S A                + L  L
Sbjct: 92  WSFLFQVQVQLSMMKKYKAPVEAP-IRLMER----SLARFCFVENLHNNGLLNDVELHML 146

Query: 121 QEISVQEVM-------PDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHE 171
            ++    +         D  + L    ++  +R+  ++R    +S  L++F R    +HE
Sbjct: 147 NDLYNFTIEHECFVCSTDLIVYLRTSPEVAYERMLSRSRSEAEKSLSLEHF-RNIHDLHE 205

Query: 172 K--RRQI-FLDIARNQPDRCHIVDSAHSFQSVATN 203
               R+  F  +    P    ++D     + +   
Sbjct: 206 DWLVRKTKFQPL----PCPVVVIDGDKGAEELRAE 236


>gi|150383503|sp|Q4KM73|KCY_RAT RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
          Length = 196

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 10  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EGKI+       L  R +D + A   Q  +          D+
Sbjct: 48  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I + R   R      +  +    + +   EKR Q 
Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIDRCLERGKSSGRSDDNR---ESL---EKRIQT 154

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L+  +       +  +   +D++ S   V  +++ I
Sbjct: 155 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGDVMKI 191


>gi|115653220|ref|XP_792429.2| PREDICTED: similar to MGC83091 protein, partial [Strongylocentrotus
           purpuratus]
 gi|115934467|ref|XP_001190398.1| PREDICTED: similar to MGC83091 protein, partial [Strongylocentrotus
           purpuratus]
          Length = 325

 Score = 54.6 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 19/180 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE------------AARH 52
             +  +G  GAGKT+    L   L  K                E            +   
Sbjct: 29  KIVVIDGNIGAGKTSLAKGLANQLGMKYMKEATIHYFDEKELGEGKKYDDKFMGSCSLER 88

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106
                   +  +    +   A R     + ++  L  G+ ++ +R + S   +       
Sbjct: 89  FYADPFAKDGHSFRFQLAMYAVRFVQYADALQHLLETGQGVVLERSVYSDSVFMEAMFKM 148

Query: 107 GERDSSQHLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           G      + +   +++IS+  +  P C I +D PV   +  V++R        L+  E +
Sbjct: 149 GYFRKECYDYYQEVEKISMYRLKPPHCVIYMDTPVADLIDNVKSRGLNIPIEYLEALEDE 208


>gi|331664601|ref|ZP_08365507.1| hypothetical ATP-binding protein YghT [Escherichia coli TA143]
 gi|331058532|gb|EGI30513.1| hypothetical ATP-binding protein YghT [Escherichia coli TA143]
          Length = 230

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAA- 50
            I+  G +G+GK+T    L   +++      VH+ ++ G            G    +   
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTNLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +     F+  L          ++     PD  I L++ +D+   R        +  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVSLDVACAR----KPDHKRE 181

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            L+      + I  +       +          +D+    + V  +    + + +  R
Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAIMDFMTTR 227


>gi|326328032|pdb|3QEJ|A Chain A, S74e-Dck Mutant In Complex With Udp
 gi|326328033|pdb|3QEJ|B Chain B, S74e-Dck Mutant In Complex With Udp
 gi|326328034|pdb|3QEN|A Chain A, S74e Dck In Complex With 5-Bromodeoxycytidine And Udp
 gi|326328035|pdb|3QEN|B Chain B, S74e Dck In Complex With 5-Bromodeoxycytidine And Udp
          Length = 279

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    V R        +    +         +
Sbjct: 43  ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMEQKNGGNV 100

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 101 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 160

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 276


>gi|162330060|pdb|2QRN|A Chain A, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product
           Complex
 gi|162330061|pdb|2QRN|B Chain B, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product
           Complex
 gi|162330062|pdb|2QRN|C Chain C, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product
           Complex
 gi|162330063|pdb|2QRN|D Chain D, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product
           Complex
 gi|162330064|pdb|2QRO|A Chain A, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product
           Complex
 gi|162330065|pdb|2QRO|B Chain B, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product
           Complex
 gi|162330066|pdb|2QRO|C Chain C, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product
           Complex
 gi|162330067|pdb|2QRO|D Chain D, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product
           Complex
          Length = 280

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 44  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 101

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 102 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 161

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 162 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 221

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 222 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 277


>gi|60829963|gb|AAX36904.1| deoxycytidine kinase [synthetic construct]
          Length = 261

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|54696740|gb|AAV38742.1| deoxycytidine kinase [synthetic construct]
 gi|54696742|gb|AAV38743.1| deoxycytidine kinase [synthetic construct]
 gi|61367804|gb|AAX43049.1| deoxycytidine kinase [synthetic construct]
 gi|61367811|gb|AAX43050.1| deoxycytidine kinase [synthetic construct]
          Length = 261

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|33304131|gb|AAQ02573.1| deoxycytidine kinase [synthetic construct]
          Length = 261

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|33357874|pdb|1P5Z|B Chain B, Structure Of Human Dck Complexed With Cytarabine And
           Adp-Mg
 gi|33357875|pdb|1P60|A Chain A, Structure Of Human Dck Complexed With 2'-Deoxycytidine And
           Adp, Space Group C 2 2 21
 gi|33357876|pdb|1P60|B Chain B, Structure Of Human Dck Complexed With 2'-Deoxycytidine And
           Adp, Space Group C 2 2 21
 gi|33357877|pdb|1P61|B Chain B, Structure Of Human Dck Complexed With 2'-Deoxycytidine And
           Adp, P 43 21 2 Space Group
 gi|33357878|pdb|1P62|B Chain B, Structure Of Human Dck Complexed With Gemcitabine And
           Adp-Mg
 gi|88191995|pdb|2A7Q|A Chain A, Crystal Structure Of Human Dck Complexed With Clofarabine
           And Adp
          Length = 263

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 27  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 84

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 85  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 144

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 145 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 204

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 205 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 260


>gi|4503269|ref|NP_000779.1| deoxycytidine kinase [Homo sapiens]
 gi|118447|sp|P27707|DCK_HUMAN RecName: Full=Deoxycytidine kinase; Short=dCK
 gi|181510|gb|AAA35752.1| deoxycytidine kinase [Homo sapiens]
 gi|49168538|emb|CAG38764.1| DCK [Homo sapiens]
 gi|49456707|emb|CAG46674.1| DCK [Homo sapiens]
 gi|74355077|gb|AAI03765.1| Deoxycytidine kinase [Homo sapiens]
 gi|92058715|gb|AAI14618.1| Deoxycytidine kinase [Homo sapiens]
 gi|119626042|gb|EAX05637.1| deoxycytidine kinase [Homo sapiens]
 gi|189069271|dbj|BAG36303.1| unnamed protein product [Homo sapiens]
 gi|331271627|gb|AED02503.1| deoxynucleoside kinase [Homo sapiens]
          Length = 260

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|225711142|gb|ACO11417.1| Deoxynucleoside kinase [Caligus rogercresseyi]
          Length = 257

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 30/215 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  GAGKTT +  +K F       V    EP         ++ LL    +    + 
Sbjct: 36  IVVEGNIGAGKTTFLQNIKDFSPPDLIHVI--DEPVLEWKTYKGKYDLLDMMYE--DPKK 91

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSL 120
            + +F       +    +  +    I L +R L S  A                + L  L
Sbjct: 92  WSFLFQVQVQLSMMKKYKAPVEAP-IRLMERSLLS--ARFCFVENLHNNGLLNDVELHML 148

Query: 121 QEISVQEVM-------PDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHE 171
            ++    +         D  + L    ++  +R+  ++R    +S  L++F R    +HE
Sbjct: 149 NDLYNFTIEHECFVCSTDLIVYLRTSPEVAYERMLSRSRSEAEKSLSLEHF-RNIHDLHE 207

Query: 172 K--RRQI-FLDIARNQPDRCHIVDSAHSFQSVATN 203
               R+  F  +    P    ++D     + +   
Sbjct: 208 DWLVRKTKFQPL----PCPVVVIDGDKGAEELRAE 238


>gi|195392389|ref|XP_002054840.1| GJ22572 [Drosophila virilis]
 gi|194152926|gb|EDW68360.1| GJ22572 [Drosophila virilis]
          Length = 252

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 32/207 (15%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT ++      Q+ + DV +  EP          ++L          +  A
Sbjct: 25  IEGNIGSGKTTFLN----HFQKYDKDVCLITEPVEKWRNVNGVNLL---EKMYKDPQKWA 77

Query: 69  IVFAAARLDHVENVIRPALMEG------KILLCDRFLDSS---YAYQGERDSSQHLFL-D 118
           + F +        V    L         K+ + +R + SS   +     R+ S  L + +
Sbjct: 78  MPFQSY-------VTLTMLQAHTAPTSKKLKIIERSIYSSRYCFVENMFRNGSLELGMYN 130

Query: 119 SLQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +LQE          V  D  I L    ++  +R++ R    ES     + ++   +HE  
Sbjct: 131 TLQEWYKFIEESIHVQSDLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHE-- 188

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSV 200
               +   R Q  +  ++++  + +++
Sbjct: 189 -DWLIHHRRPQQSKVLVLNADLNLENI 214


>gi|77411563|ref|ZP_00787906.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           CJB111]
 gi|77162417|gb|EAO73385.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           CJB111]
          Length = 213

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L + L     DV                  +L     +   
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPQK 48

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117
            A  +   F   R       I+ A      +L DR +       +  Y+    +   L +
Sbjct: 49  YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103

Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 + L+E+  + +  PD  + +D+  D  L+R+  R    E    +    +    +
Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160

Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214
           ++    + +   N    P     +D        + + +  ++L+ +   +QK
Sbjct: 161 KQVHSKYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209


>gi|229542246|ref|ZP_04431306.1| deoxynucleoside kinase [Bacillus coagulans 36D1]
 gi|229326666|gb|EEN92341.1| deoxynucleoside kinase [Bacillus coagulans 36D1]
          Length = 212

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 24/190 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G GKT+    +  +   +     V   P                  +E+  +
Sbjct: 6   FIAIEGPIGVGKTSLAKAISAYFSFELLKEIVDENPFLGKFY---------TNKEEWSFQ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123
            E + F   R   +E++ +         + D  +  S  +   R + +    +   +I  
Sbjct: 57  TE-MFFLCNRYKQLEDLKQHRQPA----VADYHIFKSLIF--ARRTLKTDEFEKFSKIYD 109

Query: 124 --SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +     P+  I L   ++  LKR++ R    E    + + +K    + +    F+   
Sbjct: 110 ILTADMPQPNVIIYLHASLETLLKRIEIRGRAFEKNMQETYLQKLSADYGR----FMSRF 165

Query: 182 RNQPDRCHIV 191
             +     ++
Sbjct: 166 EAEHPNIPVL 175


>gi|254516609|ref|ZP_05128668.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR5-3]
 gi|219675032|gb|EED31399.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR5-3]
          Length = 232

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 16/159 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GKTT    L      +     +  +    P  E               A 
Sbjct: 25  YIAVEGPIGVGKTTLTRRLAETFNHE----ILLEDADQNPFLERFYR------NRNEAAL 74

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
           A  + F   R   ++ + +  L    + + D FL   D  +A          L+    Q+
Sbjct: 75  ATQLFFLFQRAQKMQELRQSELFSP-VRVAD-FLIEKDPLFARINLDSDEFELYEKVYQK 132

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
           +++    PD  I L    D+ L R+ +R  LR    +D 
Sbjct: 133 LTIDAPRPDLVIYLQASTDVLLDRI-DRRGLRHEKSIDR 170


>gi|195144770|ref|XP_002013369.1| GL23445 [Drosophila persimilis]
 gi|194102312|gb|EDW24355.1| GL23445 [Drosophila persimilis]
          Length = 250

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 36/212 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66
            EG  G+GKTT+++      ++   ++ +  EP          ++L  +     ++    
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYRDEICLLTEPVEKWRNVNGVNLLERMYKEPKKWAMPF 80

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQE 122
           ++ V       H     +      K+ + +R + SS Y +        S +    ++LQE
Sbjct: 81  QSYVTLTMLQAHTAPTDK------KLKIMERSIFSSRYCFVENMHRNGSLETGMYNTLQE 134

Query: 123 ISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER------KDVMIHE 171
                     V  D  I L    ++  +R++ R    ES     + +      +D +IH 
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHEDWLIHN 194

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
           +R Q           +  ++D+  + +++++ 
Sbjct: 195 RRNQA---------CKVLVLDADLTLENISSE 217


>gi|149033733|gb|EDL88529.1| deoxycytidine kinase [Rattus norvegicus]
          Length = 260

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 85/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         + +  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFIFQSYACLSRIRAQLASLNGRLRDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ +  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYIRGRDEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F  + +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNFEYL-QEVP--ILTLDVNEDFKDKHESLVEKVKEFL 257


>gi|195497812|ref|XP_002096259.1| GE25572 [Drosophila yakuba]
 gi|194182360|gb|EDW95971.1| GE25572 [Drosophila yakuba]
          Length = 250

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT+++      ++   D+ +  EP          ++L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKEPKKWA 77

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P     K+ + +R + S+ Y +        S +    ++L+E 
Sbjct: 78  MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    V  D  I L    ++  +R+++R    ES     + ++   +HE       
Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAHERIRHRARSEESCVPLKYLQELHELHED-----W 190

Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200
            I   +P  C   ++D+  + +++
Sbjct: 191 LIHHRRPQSCKVLVLDADLNLENI 214


>gi|322487751|emb|CBZ22992.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 274

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 29/177 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG++G GKT     L   L         T  P      E  R      G +E  A A
Sbjct: 70  IVVEGLDGTGKTLVTRTLAEKLSG---VAMSTPPPQFAAIRETFR------GQEEAVARA 120

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123
               ++AA       ++  +  +   ++ DR+  S+ A       +        D++   
Sbjct: 121 ---FYSAANYIAAAGILEAS--QSSAVVVDRWWCSTCAMALANGCNYDSLPPRGDAVYRW 175

Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVM 168
                 PD   +L +              +   +R  +  S      ++ + R +++
Sbjct: 176 PADLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSQSEMRRVAMEAYRRTNML 232


>gi|289193001|ref|YP_003458942.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus sp. FS406-22]
 gi|288939451|gb|ADC70206.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus sp. FS406-22]
          Length = 400

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ L   L++K Y V +    G T  A A     L       G + 
Sbjct: 196 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNIGVKV 251

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A   G  ++L D            R ++    ++ +++  V
Sbjct: 252 IKHKQGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNINLMEEIKK-VV 301

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 302 RVTKPDLVIF 311


>gi|118389890|ref|XP_001027990.1| Deoxynucleoside kinase family protein [Tetrahymena thermophila]
 gi|89309760|gb|EAS07748.1| Deoxynucleoside kinase family protein [Tetrahymena thermophila
           SB210]
          Length = 257

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 86/240 (35%), Gaps = 37/240 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP---AAEAARHVL--LS 56
           ++    S EG  G+GK+T + L++  ++    D  V REP             ++L    
Sbjct: 29  SNSKIFSVEGNIGSGKSTLLRLIQSLVE----DTQVVREPVNNWQAIDGNPQLNLLDAFY 84

Query: 57  CGVDEFGAEAEAIVFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +G   +   + +     H     +P ++  + +L D+F+   +A  G +    + 
Sbjct: 85  QNPHRWGYTFQVYAYFSRLKQWHEIRREKPFVVCERSVLSDKFI---FALNGHKAGFFNE 141

Query: 116 FLDSLQEISVQEVMPDC--------TIILDLPVDIGLKRVQNRYSLRESA--CLDYFERK 165
              +L       ++ D          I L +  +I  KR+Q R    E     L+Y    
Sbjct: 142 LEWALYNDYFNFLV-DKFHANQMDGIIYLHVQPEICYKRLQKRARDEEKDSISLEYL--- 197

Query: 166 DVMIHEKRRQIFLD----IARNQPDRCHIVDSAHSFQS---VATNILNIVWELVQKRVSP 218
              IH++     +     +    P    ++D    F+        I++ +   +Q+  S 
Sbjct: 198 -KDIHQRHEDWLITSKECLQEKIP--ILVIDGNTEFEQDGPKQREIISQITRFLQQNKSK 254


>gi|76787409|ref|YP_330443.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           A909]
 gi|77405673|ref|ZP_00782761.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           H36B]
 gi|76562466|gb|ABA45050.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           A909]
 gi|77175746|gb|EAO78527.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           H36B]
          Length = 213

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L + L     DV                  +L     +   
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117
            A  +   F   R       I+ A      +L DR +       +  Y+    +   L +
Sbjct: 49  YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103

Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 + L+E+  + +  PD  + +D+  D  L+R+  R    E    +    +    +
Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160

Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214
           ++    + +   N    P     +D        + + +  ++L+ +   +QK
Sbjct: 161 KQVHSKYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209


>gi|159042023|ref|YP_001541275.1| thymidylate kinase-like protein [Caldivirga maquilingensis IC-167]
 gi|157920858|gb|ABW02285.1| Thymidylate kinase-like protein [Caldivirga maquilingensis IC-167]
          Length = 211

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------VLLSC 57
           GL I   G +G+GK+T    L   L R+ + V V+   G    A           VL  C
Sbjct: 2   GLIICLTGPDGSGKSTVARELALELSRRGFRVRVSWMRGSHTIASLIARFLSRFPVLRGC 61

Query: 58  GVDEFG--------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           G   +G             + F +A    +     PAL+ G +++ DR +     +    
Sbjct: 62  GNPYYGVSIPGSLRPLWWFLEFISAIPIILLRYFLPALL-GYVVIGDRCVLDLVVWVSVT 120

Query: 110 DSSQHLFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                     L + +    +     + +    ++   R    + LRE   +
Sbjct: 121 TGDSTFVKSILGKALISMAMKSSIIVYVTADYEVLRARRGADWGLREQLGM 171


>gi|115372758|ref|ZP_01460064.1| deoxyadenosine kinase [Stigmatella aurantiaca DW4/3-1]
 gi|115370239|gb|EAU69168.1| deoxyadenosine kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 256

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 15/155 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G GKT+  +LL      +     V   P  +          L      F  
Sbjct: 45  RYIVVEGPIGVGKTSLSNLLAERFNARRVLEVVEENPFLSSF-------YLDRQKYAFQT 97

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +   ++   +R    + + +  L     +  D +L   D  +A          L+    +
Sbjct: 98  QTFFLL---SRFRQQQELFQQDLFSSVTV-SD-YLFAKDRIFACLTLDSHELALYDRVFE 152

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
            +  +   PD  I L   +D+ L R++ R    E 
Sbjct: 153 ALGPRVTKPDLVIYLQARLDVLLHRIKKRGREFER 187


>gi|134104772|pdb|2JCS|A Chain A, Active Site Mutant Of Dnk From D. Melanogaster With Dttp
           Bound
 gi|134104773|pdb|2JCS|B Chain B, Active Site Mutant Of Dnk From D. Melanogaster With Dttp
           Bound
          Length = 230

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT+++      ++   D+ +  +P          ++L    +     +  A
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYKNDICLLTDPVEKWRNVNGVNLL---ELMYKDPKKWA 77

Query: 69  IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123
           + F +   L  +++   P     K+ + +R + S+ Y +        S +    ++L+E 
Sbjct: 78  MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135

Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    V  D  I L    ++  +R++ R    ES     + ++   +HE       
Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190

Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200
            I + +P  C   ++D+  + +++
Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214


>gi|125775239|ref|XP_001358871.1| GA18891 [Drosophila pseudoobscura pseudoobscura]
 gi|54638612|gb|EAL28014.1| GA18891 [Drosophila pseudoobscura pseudoobscura]
          Length = 250

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 36/212 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66
            EG  G+GKTT+++      ++   ++ +  EP          ++L  +     ++    
Sbjct: 25  IEGNIGSGKTTYLN----HFEKYRDEICLLTEPVEKWRNVNGVNLLERMYKEPKKWAMPF 80

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQE 122
           ++ V       H     +      K+ + +R + SS Y +        S +    ++LQE
Sbjct: 81  QSYVTLTMLQAHTAPTDK------KLKIMERSIFSSRYCFVENMHRNGSLETGMYNTLQE 134

Query: 123 ISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER------KDVMIHE 171
                     V  D  I L    ++  +R++ R    ES     + +      +D +IH 
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHEDWLIHN 194

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
           +R Q           +  ++D+  + +++++ 
Sbjct: 195 RRNQA---------CKVLVLDADLTLENISSE 217


>gi|22537965|ref|NP_688816.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           2603V/R]
 gi|76797872|ref|ZP_00780135.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           18RS21]
 gi|77414262|ref|ZP_00790422.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           515]
 gi|22534865|gb|AAN00689.1|AE014274_19 deoxynucleoside kinase family protein [Streptococcus agalactiae
           2603V/R]
 gi|76586775|gb|EAO63270.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           18RS21]
 gi|77159678|gb|EAO70829.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           515]
          Length = 213

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L + L     DV                  +L     +   
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPQK 48

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117
            A  +   F   R       I+ A      +L DR +       +  Y+    +   L +
Sbjct: 49  YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103

Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 + L+E+  + +  PD  + +D+  D  L+R+  R    E    +    +    +
Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160

Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214
           ++    + +   N    P     +D        + + +  ++L+ +   +QK
Sbjct: 161 KQVHSEYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209


>gi|145490122|ref|XP_001431062.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398164|emb|CAK63664.1| unnamed protein product [Paramecium tetraurelia]
          Length = 226

 Score = 54.3 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 91/229 (39%), Gaps = 28/229 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEFG 63
            IS EG  G+GK+T + L    +Q+K  D+    EP              LL    +E  
Sbjct: 8   LISIEGNIGSGKSTLLRL----MQQKYPDLRFIAEPVNEWQSINGDPTLNLLGSFYEEPS 63

Query: 64  AEAEAIVFAAA--RLDHVENVIRPAL--MEGKILLCDRFLDS---SYAYQGERDS----S 112
             A  +   A   RL H + V+   L   +   +L +R +++    +A  G ++      
Sbjct: 64  RWAYTMQVYAFYSRLKHWKEVLSDPLNPEDRHCILSERSIEADKEIFAVNGHKNGMINKL 123

Query: 113 QHLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIH 170
           +    +   E++ +        I L +  D+   R+Q R    E        ++ +  IH
Sbjct: 124 EFALYEKFYELALLMNCQ--MIIYLQVDPDVCFSRMQKRARDEEKNT---ISKEYLTQIH 178

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQS--VATN-ILNIVWELVQKRV 216
           ++  + +L    +Q     +++    F+S  V  N + N + + +Q+ +
Sbjct: 179 DR-HEEWLLRETHQNTSILVLNGDKEFESDLVQQNKMFNAIDQFLQELL 226


>gi|116623133|ref|YP_825289.1| hypothetical protein Acid_4039 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226295|gb|ABJ85004.1| hypothetical protein Acid_4039 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 204

 Score = 53.9 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 26/153 (16%)

Query: 3   SGLFISFEGIEG-----AGKTTHISLLKRFLQRKNYDVHVTREPGGTP---AAEAARHVL 54
            G  I+ EG  G     AGK      L R  +++N +   +            + AR + 
Sbjct: 8   KGRLIALEGSGGRPMAVAGK-----FLAREFRQRNVETGSSAWDASDIFFQIGQGARGL- 61

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                         +++A+     +   IRPAL  G  ++   +++++  + G       
Sbjct: 62  -----PGASPRTLILLYASDLAFRLRWQIRPALEGGGTVIAAPYVETAIGF-GRAAGLPQ 115

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVD-IGLKR 146
            +L  + E +      D T    +P D + ++R
Sbjct: 116 RWLRQIFEFAPAA---DGTF--RVPEDAVAMER 143


>gi|260665190|ref|ZP_05866039.1| deoxyadenosine kinase [Lactobacillus jensenii SJ-7A-US]
 gi|313472750|ref|ZP_07813238.1| deoxyadenosine kinase [Lactobacillus jensenii 1153]
 gi|239529275|gb|EEQ68276.1| deoxyadenosine kinase [Lactobacillus jensenii 1153]
 gi|260560927|gb|EEX26902.1| deoxyadenosine kinase [Lactobacillus jensenii SJ-7A-US]
          Length = 217

 Score = 53.9 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L    +   V++ P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 52

Query: 67  EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115
             +   +            I  AL E    ++ DR  + D+ +    A  G  D ++  +
Sbjct: 53  FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 107

Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++D +  +           PD  I +++ +D  L R++ R    E    D   ++    +
Sbjct: 108 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDNMLSRIKRRGREFEQLETDPSLKE---YY 164

Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211
            + R  +     N           D+ + VD+    ++V   I N + EL
Sbjct: 165 ARLRNYYGPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 214


>gi|307136273|gb|ADN34101.1| uridylate kinase [Cucumis melo subsp. melo]
          Length = 209

 Score = 53.9 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 47/215 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 29  GGPGSGKGTQCAYIVEHF---GF--------THFSAGDLLRGEIDSGSENGL-------- 69

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125
                      +I+  + EGKI+  +           E   ++   +D          + 
Sbjct: 70  -----------MIKSMMNEGKIVPSE-VTVKLLQKAMEESGNEKFLIDGFPRNDENRAAF 117

Query: 126 Q---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179
                + P   +  D P +   +R+ NR   R+   ++   ++  +  +      Q +  
Sbjct: 118 AAVTGIEPAFVLFFDCPEEEMERRILNRNQGRDDDNIETIRKRFKVFLQSSLPVVQYYES 177

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           I      + H +D+A   + V  ++  +   + +K
Sbjct: 178 I-----GKVHKIDAARPVEEVFESVKAVFTSINEK 207


>gi|25011906|ref|NP_736301.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           NEM316]
 gi|24413448|emb|CAD47526.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 213

 Score = 53.9 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L + L     DV                  +L     +   
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117
            A  +   F   R       I+ A      +L DR +       +  Y+    +   L +
Sbjct: 49  YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103

Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 + L+E+  + +  PD  + +D+  D  L+R+  R    E    +    +    +
Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160

Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214
           ++    + +   N    P     +D        + + +  ++L+ +   +QK
Sbjct: 161 KQVHSEYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209


>gi|302766477|ref|XP_002966659.1| hypothetical protein SELMODRAFT_85389 [Selaginella moellendorffii]
 gi|300166079|gb|EFJ32686.1| hypothetical protein SELMODRAFT_85389 [Selaginella moellendorffii]
          Length = 199

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 47/231 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVD 60
           I F G  G GK T    L    +   Y    T +        G+   +    ++    + 
Sbjct: 1   IVFLGGPGCGKGTQCEELV---RDFGYSHLSTGDLLRAEVASGSELGKQCDTLMKEGKLV 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   +              + A+ + K   C RFL   +             +D  
Sbjct: 58  PLDVTINLL--------------KQAMGKAK---CKRFLIDGF----------PRAVDQA 90

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD------YFERKDVMIHEKRR 174
            E   +   PD  + LD  +++  KR+  R      A  +       FE   +   +   
Sbjct: 91  HEFEAKVGKPDVVLCLDCSLELMEKRLLQRGKASGRADDNIETIKKRFETF-LAESKPVI 149

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP-LSSKKD 224
             +    ++ P     + +      V  ++   +   V+K V P + +K D
Sbjct: 150 DYYR---KSLPKAVKTIPTDKMPDEVYADVKTALKATVEKPVPPKVPAKAD 197


>gi|238855471|ref|ZP_04645781.1| deoxyadenosIne kinase [Lactobacillus jensenii 269-3]
 gi|282932161|ref|ZP_06337611.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1]
 gi|238831961|gb|EEQ24288.1| deoxyadenosIne kinase [Lactobacillus jensenii 269-3]
 gi|281303701|gb|EFA95853.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1]
          Length = 216

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L    +   V++ P            +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 51

Query: 67  EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115
             +   +            I  AL E    ++ DR  + D+ +    A  G  D ++  +
Sbjct: 52  FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 106

Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++D +  +           PD  I +++ +D  L R++ R    E    D   ++    +
Sbjct: 107 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDNMLSRIKRRGREFEQLETDPSLKE---YY 163

Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211
            + R  +     N           D+ + VD+    ++V   I N + EL
Sbjct: 164 ARLRNYYGPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 213


>gi|256809975|ref|YP_003127344.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus fervens AG86]
 gi|256793175|gb|ACV23844.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus fervens AG86]
          Length = 397

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ L   L++K Y V +    G T  A A     L       G + 
Sbjct: 193 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNIGVKV 248

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A   G  ++L D            R ++    ++ +++  V
Sbjct: 249 IKHKQGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNTNLMEEIKK-VV 298

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 299 RVTKPDLVIF 308


>gi|126663146|ref|ZP_01734144.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Flavobacteria
           bacterium BAL38]
 gi|126624804|gb|EAZ95494.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Flavobacteria
           bacterium BAL38]
          Length = 400

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 29/205 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKTT  + +      K   + + R        +  +         E    
Sbjct: 202 YIAIEGNIGAGKTTLSTKIAEDCNAK---LVLERFADNPFLPKFYKDQSRYAFPLEMS-- 256

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-----DSL 120
                F A R   + + +    +    ++ D  +  S  +           L     D +
Sbjct: 257 -----FLADRYQQLSDDLAQFDLFKDFVVADYHIFKSLIFAKVTLQEDEFRLYKTMFDII 311

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLD 179
            +   +   PD  + L    +  L+ ++ R           +E++      EK    +LD
Sbjct: 312 HK---EMPKPDLYVYLYQNTERLLENIKKRGRS--------YEQEIPADYLEKINHGYLD 360

Query: 180 IARNQPD-RCHIVDSAHSFQSVATN 203
             + Q D    I+D +     V   
Sbjct: 361 YIKTQTDLNVLIIDVS-DLDFVKKQ 384


>gi|297673690|ref|XP_002814884.1| PREDICTED: deoxycytidine kinase-like [Pongo abelii]
          Length = 260

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 42/241 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ------------------RKNYDVHVTREPGGTPAAE 48
           IS EG   AGK+T +++LK+  +                  +  ++   T +  G    +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVAKWCNVQSTQNKFEELTTSQKNGGNVLQ 83

Query: 49  AARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSS 102
                        F  +  A + +  R         +++  +P L   + +  DR++ +S
Sbjct: 84  MMYE---KPERWSFTFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFAS 139

Query: 103 YAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
             Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E  
Sbjct: 140 NLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQG 199

Query: 158 -CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E 
Sbjct: 200 IPLEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEF 256

Query: 212 V 212
           +
Sbjct: 257 L 257


>gi|167563977|ref|ZP_02356893.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           oklahomensis EO147]
          Length = 227

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E               A
Sbjct: 18  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +     I  A      ++ D F+   +  +A     D    L+     
Sbjct: 71  Q----LAFALQRERQAREIAAAYEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFARIQKRGQPMELQIGDAY 166


>gi|322505516|emb|CAM42947.2| putative RNA guanylyltransferase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 688

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 51/211 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    +       +       + G  P AE  R V      + FG EA+   
Sbjct: 144 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVERAV-----KENFGPEAK--- 195

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R                ++L DRF+          +   +    +L   + Q  +P
Sbjct: 196 ---NRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--ARQLPVP 230

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDIARNQPDRC- 188
                L +    GL+R Q+R   +  A    + E++             +IA +   +  
Sbjct: 231 -IVFWLQVDPKEGLRRAQSRGDQKAGADHWRYVEQRAQA----------EIADHVYKKIG 279

Query: 189 --HIVDSAHSFQS--VATNILNIVWELVQKR 215
             HI+D     ++  V   I +I+  L  KR
Sbjct: 280 VLHIIDCNM-LEARRVGDRIYSIIDGLFPKR 309


>gi|156387504|ref|XP_001634243.1| predicted protein [Nematostella vectensis]
 gi|156221324|gb|EDO42180.1| predicted protein [Nematostella vectensis]
          Length = 200

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 24/186 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +S   I  EG  G GKTT    L R L   NY + +  EP       A            
Sbjct: 12  SSAKVIILEGNIGVGKTTLACQLARKL---NYKLFL--EPTNKNPYLAR----FYEDPKR 62

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFLD 118
           +  + +  +F   R           L  G+ +L DR + S   +        +       
Sbjct: 63  YALKMQIWLF-RQRFRMYSKATSHVLTTGQGVLLDRSVFSDCVFADVNYKEGTISEEGYK 121

Query: 119 SLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              E+  + +     P   + +D   ++  +R+  R    ES          +   +   
Sbjct: 122 YYNELKTKALKSVPPPHVMLFVDASPEVCFERIHGRGRDYESGIP-------LSYLKALH 174

Query: 175 QIFLDI 180
           + + ++
Sbjct: 175 KAYRNM 180


>gi|154343127|ref|XP_001567509.1| RNA guanylyltransferase [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 688

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 51/211 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    +       +       + G  P AE  R V      + FG EA+   
Sbjct: 144 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVERAV-----KENFGPEAK--- 195

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R                ++L DRF+          +   +    +L   + Q  +P
Sbjct: 196 ---NRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--ARQLPVP 230

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDIARNQPDRC- 188
                L +    GL+R Q+R   +  A    + E++             +IA +   +  
Sbjct: 231 -IVFWLQVDPKEGLRRAQSRGDQKAGADHWRYVEQRAQA----------EIADHVYKKIG 279

Query: 189 --HIVDSAHSFQS--VATNILNIVWELVQKR 215
             HI+D     ++  V   I +I+  L  KR
Sbjct: 280 VLHIIDCNM-LEARRVGDRIYSIIDGLFPKR 309


>gi|114594358|ref|XP_517245.2| PREDICTED: deoxycytidine kinase [Pan troglodytes]
          Length = 260

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESECMNEIEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPETCLHRMYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|322501791|emb|CBZ36873.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1104

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 70/209 (33%), Gaps = 47/209 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    +       +       + G  P AE  + V      + FG +A+   
Sbjct: 560 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KNNFGPDAK--- 611

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R                ++L DRF+          +   +    +L     Q  +P
Sbjct: 612 ---DRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--VCQLPVP 646

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188
                L +    GL+R Q+R   +  +    +  +R    I ++    +  I        
Sbjct: 647 -LVFWLQVDPKEGLRRAQSRGDQKAGSDHWRYVEQRAQAEIADRV---YKKI-----GVL 697

Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215
           H++D     ++  V   I +I+  L  KR
Sbjct: 698 HVIDCNA-LEARRVGDRIYSIIDGLFPKR 725


>gi|225869384|ref|YP_002745332.1| deoxynucleoside kinase protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702660|emb|CAX00746.1| deoxynucleoside kinase protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 213

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 51/234 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     +V         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117
           +  A +     L+     I+ A      +L DR +       +  Y+    +   L +  
Sbjct: 47  KKYAFLLQIFFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQ 105

Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167
               + L+E+  + +  PD  I +D+  +  L+R++ R           FE+ D      
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFEKMLERIEKRGR--------RFEQVDDNPDLE 157

Query: 168 MIHEKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
             + +    +          P     +D        + + +AT +L+++ E ++
Sbjct: 158 AYYHQVHGEYPSWYEQYDVSPK--MKIDGNKLDFVQNPEDLAT-VLHMIDEKLK 208


>gi|239618036|ref|YP_002941358.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1]
 gi|239506867|gb|ACR80354.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1]
          Length = 205

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 16/162 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G +++ EG+ G GKTT +  L +          V   P  +   E          ++ +
Sbjct: 6   RGKYVAIEGVIGVGKTTLVRYLSQEYALPPVLEVVEENPFLSKFYE---------DMERW 56

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119
             + + + F  +R D  E + +  L  G   + D ++   D  +A    +     L+   
Sbjct: 57  AFQTQ-LFFLVSRFDQQEKL-KKTLQMGMGAVSD-YIFDKDRLFASLTLKGEHLGLYERI 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
              +      PD  + L   +D+ ++R+  R    E   +D 
Sbjct: 114 FGLLKSHTPTPDLVVYLYADIDVLMERIALRDRPFE-RSMDR 154


>gi|163786479|ref|ZP_02180927.1| deoxyguanosine kinase/deoxyadenosine kinase subunit
           [Flavobacteriales bacterium ALC-1]
 gi|159878339|gb|EDP72395.1| deoxyguanosine kinase/deoxyadenosine kinase subunit
           [Flavobacteriales bacterium ALC-1]
          Length = 375

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 20/190 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKT+  + + +    K         P      +               A 
Sbjct: 181 FIAIEGNIGAGKTSLANKIAQDFNAKLILERFADNPFLPKFYKEPERY----------AF 230

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123
              + F A R   + + +    +    ++ D  +  S  +           L      ++
Sbjct: 231 TLEMSFLADRYQQISDDLSQLDLFKDFMVSDYDVHKSLVFSKVTLPEDEFRLYRKLFYQV 290

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                 PD  + L    +     ++ R    ES   D          EK    +L+  ++
Sbjct: 291 YKDIARPDLYVYLYQNTERLQANIKKRGRKYESEIED-------EYLEKINSGYLEFLKS 343

Query: 184 QPD-RCHIVD 192
           Q +    I+D
Sbjct: 344 QTELNVKIID 353


>gi|257899982|ref|ZP_05679635.1| deoxyguanosine kinase [Enterococcus faecium Com15]
 gi|293572919|ref|ZP_06683869.1| deoxyguanosIne kinase [Enterococcus faecium E980]
 gi|257837894|gb|EEV62968.1| deoxyguanosine kinase [Enterococcus faecium Com15]
 gi|291607047|gb|EFF36419.1| deoxyguanosIne kinase [Enterococcus faecium E980]
          Length = 235

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L + L+ K         P      +     L     +++    +      
Sbjct: 9   GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119
             L      I+ A      +L DR  + DS   +                +      L  
Sbjct: 60  RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+EIS Q+  PD  + + +  +  L R++ R    E    D    +    +++  + + +
Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169

Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224
                   P    ++D    +  VA       + + ++ R   ++ + D
Sbjct: 170 WYEQFDICPK--IVIDGDK-YDFVADPACGEQIVQEIKMRAKKMTEEAD 215


>gi|261402774|ref|YP_003246998.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus vulcanius M7]
 gi|261369767|gb|ACX72516.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus vulcanius M7]
          Length = 377

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ L   L++K Y V +    G T  A A     L       G + 
Sbjct: 173 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNIGVKV 228

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A   G  ++L D            R ++    ++ +++  V
Sbjct: 229 IKHKQGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNANLMEEIKK-VV 278

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 279 RVTKPDLVIF 288


>gi|215488312|ref|YP_002330743.1| conserved predicted protein with nucleoside triphosphate hydrolase
           domain [Escherichia coli O127:H6 str. E2348/69]
 gi|312968682|ref|ZP_07782891.1| uncharacterized ATP-binding protein yghT [Escherichia coli 2362-75]
 gi|215266384|emb|CAS10821.1| conserved predicted protein with nucleoside triphosphate hydrolase
           domain [Escherichia coli O127:H6 str. E2348/69]
 gi|312286900|gb|EFR14811.1| uncharacterized ATP-binding protein yghT [Escherichia coli 2362-75]
          Length = 230

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 46/238 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ +           A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKIAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQEQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +     F+  L          ++     PD  I L++ +D+   R        +  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACAR----KPDHKRE 181

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            L+      + I  +       +          +D+    + V  +    + + +  R
Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|170051215|ref|XP_001861664.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Culex
           quinquefasciatus]
 gi|167872541|gb|EDS35924.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Culex
           quinquefasciatus]
          Length = 404

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 51/178 (28%), Gaps = 25/178 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53
             +  +G   AGK+     L   L  K +                 R +           
Sbjct: 83  KVVVVDGPIAAGKSAFAKELAGELDMKYFPEATMDSYYINSYGYDLRKLDPQMPPNMQSF 142

Query: 54  -----LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105
                L              +     R     + +      G+ ++ DR + S   +   
Sbjct: 143 DVAKFLQDPKHRNVA--TFQLRMLIQRYSQYIDALAHLFSTGEGVVLDRSVYSDMVFVEA 200

Query: 106 ----QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                     ++ ++ + ++    + + P   I LD+PV+I   R++ R S  E    
Sbjct: 201 MYKNGFLSKGARSVYYELVKNTFAELMKPHLVIYLDVPVNIVKDRIKKRASPAEVNSP 258


>gi|216263909|ref|ZP_03435903.1| deoxyguanosine/deoxyadenosine kinase [Borrelia afzelii ACA-1]
 gi|215979953|gb|EEC20775.1| deoxyguanosine/deoxyadenosine kinase [Borrelia afzelii ACA-1]
          Length = 201

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 21/167 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I  EG+ G GKTT  ++L + L+     V    E                     F  
Sbjct: 1   MVIVIEGLIGVGKTTLGNILSKELK-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPV 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFL 117
           +   I F   R   ++ V R    +G   + DR +     +           D    +++
Sbjct: 56  Q---INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYI 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           D L  +      P   I LD  +D   +R++NR    E     DY E
Sbjct: 108 DLLDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 154


>gi|321474424|gb|EFX85389.1| hypothetical protein DAPPUDRAFT_230557 [Daphnia pulex]
          Length = 192

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 59/214 (27%), Gaps = 49/214 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +    Q     VH+        A +  R         E  A  E   
Sbjct: 13  GGPGAGKGTQCAKIVEKFQY----VHL-------SAGDLLRE----ERNTEGSAYGEL-- 55

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125
                       I   +  G I+   +      S  A   ++  +    +D     + ++
Sbjct: 56  ------------IESHIRNGTIVPVEI----TCSLLATAMKKSGNNKFLIDGFPRNKDNL 99

Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                 M D T     +  D   +  ++R   R +       D  E          +   
Sbjct: 100 DGWQKEMGDKTNVQFVLFFDCSQEACMERCLQRGAAGSGRSDDNEESLKKRFQTYVKDT- 158

Query: 178 LDIARNQP--DRCHIVDSAHSFQSVATNILNIVW 209
           + I  +         +D++ S   V  ++     
Sbjct: 159 MAIIEHYDALGLVRKIDASQSPDQVFEDVTKAFE 192


>gi|163753143|ref|ZP_02160267.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Kordia
           algicida OT-1]
 gi|161326875|gb|EDP98200.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Kordia
           algicida OT-1]
          Length = 377

 Score = 53.9 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 28/215 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  + +      K         P      E             F  E
Sbjct: 182 YIAIEGNIGAGKTSLATKIAEDFNGKLILERFADNPFLPKFYE-------DNSRYAFPLE 234

Query: 66  AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123
                F A R   + +++ +  L +  I+  D  +  S  +      ++   L   L +I
Sbjct: 235 MS---FLADRYQQISDDLAQLDLFKDFIV-SDYDVVKSLIFAKVTLQNEEYKLYRKLFDI 290

Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +E+  PD  I L    +  LK ++ R         DY ++      EK    +L+  R
Sbjct: 291 MYKEIPKPDLYIYLYQNTERLLKNIKKRGR-------DYEQKIPSEYLEKINNGYLEFIR 343

Query: 183 NQPD-RCHIVDSAHSFQSVA-----TNILNIVWEL 211
              D    I+D +     VA       I++ + E 
Sbjct: 344 THKDLNVKIIDVS-DLDFVANANDYQKIISEIHEA 377


>gi|69244427|ref|ZP_00602843.1| Deoxyguanosine kinase [Enterococcus faecium DO]
 gi|257879066|ref|ZP_05658719.1| deoxyguanosine kinase [Enterococcus faecium 1,230,933]
 gi|257881691|ref|ZP_05661344.1| deoxyguanosine kinase [Enterococcus faecium 1,231,502]
 gi|257886322|ref|ZP_05665975.1| deoxyguanosine kinase [Enterococcus faecium 1,231,501]
 gi|257890920|ref|ZP_05670573.1| deoxyguanosine kinase [Enterococcus faecium 1,231,410]
 gi|260558590|ref|ZP_05830786.1| deoxyguanosine kinase [Enterococcus faecium C68]
 gi|261206752|ref|ZP_05921443.1| deoxyguanosine kinase [Enterococcus faecium TC 6]
 gi|289566434|ref|ZP_06446860.1| deoxyguanosine kinase [Enterococcus faecium D344SRF]
 gi|293557078|ref|ZP_06675637.1| deoxyguanosIne kinase [Enterococcus faecium E1039]
 gi|293559538|ref|ZP_06676073.1| deoxyguanosIne kinase [Enterococcus faecium E1162]
 gi|293570132|ref|ZP_06681211.1| deoxyguanosIne kinase (dguo kinase) (dgk)(deoxynucleoside kinase
           complex i f-component) [Enterococcus faecium E1071]
 gi|294615258|ref|ZP_06695137.1| deoxyguanosIne kinase [Enterococcus faecium E1636]
 gi|294619535|ref|ZP_06698972.1| deoxyguanosine kinase [Enterococcus faecium E1679]
 gi|294623330|ref|ZP_06702191.1| deoxyguanosIne kinase [Enterococcus faecium U0317]
 gi|68196368|gb|EAN10796.1| Deoxyguanosine kinase [Enterococcus faecium DO]
 gi|257813294|gb|EEV42052.1| deoxyguanosine kinase [Enterococcus faecium 1,230,933]
 gi|257817349|gb|EEV44677.1| deoxyguanosine kinase [Enterococcus faecium 1,231,502]
 gi|257822178|gb|EEV49308.1| deoxyguanosine kinase [Enterococcus faecium 1,231,501]
 gi|257827280|gb|EEV53906.1| deoxyguanosine kinase [Enterococcus faecium 1,231,410]
 gi|260075764|gb|EEW64070.1| deoxyguanosine kinase [Enterococcus faecium C68]
 gi|260078882|gb|EEW66582.1| deoxyguanosine kinase [Enterococcus faecium TC 6]
 gi|289161755|gb|EFD09629.1| deoxyguanosine kinase [Enterococcus faecium D344SRF]
 gi|291587331|gb|EFF19216.1| deoxyguanosIne kinase (dguo kinase) (dgk)(deoxynucleoside kinase
           complex i f-component) [Enterococcus faecium E1071]
 gi|291591897|gb|EFF23527.1| deoxyguanosIne kinase [Enterococcus faecium E1636]
 gi|291594226|gb|EFF25663.1| deoxyguanosine kinase [Enterococcus faecium E1679]
 gi|291597265|gb|EFF28455.1| deoxyguanosIne kinase [Enterococcus faecium U0317]
 gi|291600766|gb|EFF31059.1| deoxyguanosIne kinase [Enterococcus faecium E1039]
 gi|291606490|gb|EFF35889.1| deoxyguanosIne kinase [Enterococcus faecium E1162]
          Length = 235

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L + L+ K         P      +     L     +++    +      
Sbjct: 9   GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119
             L      I+ A      +L DR  + DS   +                +      L  
Sbjct: 60  RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+EIS Q+  PD  + + +  +  L R++ R    E    D    +    +++  + + +
Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169

Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224
                   P    ++D    +  VA       + + ++ R   ++ + D
Sbjct: 170 WYEQFDICPK--IVIDGDK-YDFVADPACGEQIVQEIKMRAKKMTEEAD 215


>gi|258615297|ref|ZP_05713067.1| deoxyguanosine kinase [Enterococcus faecium DO]
 gi|314939639|ref|ZP_07846864.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04]
 gi|314943994|ref|ZP_07850695.1| deoxynucleoside kinase [Enterococcus faecium TX0133C]
 gi|314948598|ref|ZP_07851974.1| deoxynucleoside kinase [Enterococcus faecium TX0082]
 gi|314953880|ref|ZP_07856743.1| deoxynucleoside kinase [Enterococcus faecium TX0133A]
 gi|314993527|ref|ZP_07858883.1| deoxynucleoside kinase [Enterococcus faecium TX0133B]
 gi|314995548|ref|ZP_07860645.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01]
 gi|313590242|gb|EFR69087.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01]
 gi|313591964|gb|EFR70809.1| deoxynucleoside kinase [Enterococcus faecium TX0133B]
 gi|313594215|gb|EFR73060.1| deoxynucleoside kinase [Enterococcus faecium TX0133A]
 gi|313597418|gb|EFR76263.1| deoxynucleoside kinase [Enterococcus faecium TX0133C]
 gi|313641048|gb|EFS05628.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04]
 gi|313644975|gb|EFS09555.1| deoxynucleoside kinase [Enterococcus faecium TX0082]
          Length = 239

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L + L+ K         P      +     L     +++    +      
Sbjct: 13  GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 63

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119
             L      I+ A      +L DR  + DS   +                +      L  
Sbjct: 64  RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+EIS Q+  PD  + + +  +  L R++ R    E    D    +    +++  + + +
Sbjct: 118 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 173

Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224
                   P    ++D    +  VA       + + ++ R   ++ + D
Sbjct: 174 WYEQFDICPK--IVIDGDK-YDFVADPACGEQIVQEIKMRAKKMTEEAD 219


>gi|315271314|gb|ACO47182.2| putative Deoxyguanosine kinase (Deoxynucleoside kinase complex I
           F-component) [Deinococcus deserti VCD115]
          Length = 203

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 15/156 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG  G GKT+    L      +     V   P      E           D +  
Sbjct: 1   MYVVVEGPIGVGKTSLAGRLAARYGAELNLEIVEENPFLARFYEQ---------PDAYSF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           + +   F  +R   +  + +P L  G  ++ D +L   D  +A    +D+  HL+ D   
Sbjct: 52  QVQVF-FLLSRFKQLSALSQPGLFSGN-VVSD-YLFDKDFIFAAMNLKDAEFHLYEDLYA 108

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            +S +   PD  I L    D  L+R+  R    E  
Sbjct: 109 HLSPRLPTPDLVIYLRADTDELLRRIARRGRPFERD 144


>gi|294155668|ref|YP_003560052.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145]
 gi|291600306|gb|ADE19802.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145]
          Length = 219

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 78/226 (34%), Gaps = 26/226 (11%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60
           + I   GI G   +GK+     L ++  +    V +                L     + 
Sbjct: 1   MLI---GISGMISSGKSVLSKKLNKYYAK---SVMLKEFEEDDEVFNTFLKWLYEKRPNL 54

Query: 61  EFGAEAEAI-VFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQG----ERDSSQH 114
             G ++  +        + + +  + +   + + +  DRF    Y +       +     
Sbjct: 55  TIGFQSYVVENHTTKLSELLNDYKKNSKDWKHEHIFLDRFSIEHYIFAHVNLEAKGKKYL 114

Query: 115 LFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              D+L  ++  Q+  P+  I LD+  +   KR+ +R    E      FE  +     K 
Sbjct: 115 DGYDALFSKLITQDETPNLAIYLDMTFETFKKRLFSRGRSVEVNN---FEA-NYEYFYKL 170

Query: 174 RQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQK 214
             ++ D+    A        I+++   + Q V    + ++ + V+K
Sbjct: 171 YSVYKDLFIKQAAKYNLNYVIINTDDLNEQEVFKKAIEVIDKFVEK 216


>gi|254447133|ref|ZP_05060600.1| deoxyguanosine kinase [gamma proteobacterium HTCC5015]
 gi|198263272|gb|EDY87550.1| deoxyguanosine kinase [gamma proteobacterium HTCC5015]
          Length = 214

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 31/164 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKR------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            +I  EG  GAGKT+    L         L+  + +  + +                   
Sbjct: 6   KYIVVEGPIGAGKTSLAKRLAHSYGSELLLEAASENPFLEKFY----------------Q 49

Query: 59  VDEFGAEAEAIVFAAARLDHVENV-----IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
             +  A A  + F   R   V+ +       P  +   ++  DR     +A         
Sbjct: 50  NPKQHALATQMFFLMQRAGQVQELRQSDLFEPVRVADFLIEKDR----LFAELILDADEL 105

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            L+    + +++    PD  I L  PVD+  +R+  R    E  
Sbjct: 106 KLYQQMYRHLTLDMPPPDLVIYLQAPVDVLQQRIARRGIAMEQG 149


>gi|289739929|gb|ADD18712.1| NADH-ubiquinone oxidoreductase NDUFA10/42kDa subunit [Glossina
           morsitans morsitans]
          Length = 397

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 69/231 (29%), Gaps = 34/231 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC------- 57
             I  EG   AGK+     L   L+                     R  LL         
Sbjct: 72  KLICVEGPIAAGKSKLAKELAAELEMLYVPEANMDMYYINSYGYDMR--LLDPQMPESCR 129

Query: 58  ---------GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-- 106
                      + F A +  I     R +   + +   L  G+ ++ DR   S + +   
Sbjct: 130 SFDVPKFCKDPNHFLAASFQIKMYMLRYNQYIDALAHILSTGQGVVLDRCCYSDFVFMET 189

Query: 107 ----GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACL-- 159
               G            L++ ++ E + P   I LD+PV     +++ R    E      
Sbjct: 190 MHKHGYISKGARSVYHELRQNTIYEVLRPHLVIYLDVPVQGVKDKIKARNIDYEINSKVF 249

Query: 160 -DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207
            D + R     ++   Q FL       +   I D  +    + V  +I  I
Sbjct: 250 TDDYLRTMENFYK---QHFLKDISIHAE-LLIYDWTAGGETEVVVEDIERI 296


>gi|320158417|ref|YP_004190795.1| hypothetical protein VVM_01190 [Vibrio vulnificus MO6-24/O]
 gi|319933729|gb|ADV88592.1| hypothetical protein VVMO6_03570 [Vibrio vulnificus MO6-24/O]
          Length = 203

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 65/173 (37%), Gaps = 30/173 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           + I+ EG  GAGK+T + LL + L      +  + D   T               ++S G
Sbjct: 1   MLITLEGNIGAGKSTLLPLLAKELGFQHADESVDNDSMFTS--------------IMSSG 46

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             E      +   A   ++ V          G  L+ +R   SS  +     +S    L+
Sbjct: 47  TSEQINMYMSHKLAERNIECVRKG-------GDWLV-ERCPSSSLLFGMAAGNSDEA-LN 97

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIH 170
            +    ++   P   + +  P+++ L+R++ R    E    D  F RK   +H
Sbjct: 98  VIYRDVIRAPEPQLHVYVRTPLNVCLRRMRKRGRPAELEFYDKKFLRKLEAVH 150


>gi|255557951|ref|XP_002520004.1| Thermosensitive gluconokinase, putative [Ricinus communis]
 gi|223540768|gb|EEF42328.1| Thermosensitive gluconokinase, putative [Ricinus communis]
          Length = 189

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 31/205 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I   G+ GAGK+T   +L   L+    D  V          E  R  +     D   
Sbjct: 7   GKAIVIMGVSGAGKSTIGQMLAEELKCDFLDADVFH---SQSNKEKMRQGIPLSEEDRIP 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                       L  ++  +R +L  G+ ++      SS   Q             L   
Sbjct: 64  W-----------LQSLQEALRESLTAGETIIL---GCSSLQNQYREILRSADPYYQLGSY 109

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                     ++LD+  ++ ++R+  R +  +        +  +            +  +
Sbjct: 110 VSAVKF----VLLDVSAEVLVERLNKRAAEGKHFMPATLLQSQLEF----------LHID 155

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
             +  + VD+  S +++   I +I+
Sbjct: 156 DSEGIYKVDATQSPRAIVNVIKSII 180


>gi|156187009|gb|ABU55759.1| thymidylate kinase [Clover phyllody phytoplasma]
          Length = 76

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I FEG++G+GKT+ I+ L+  L+       + +  G +   +  R++ L+    +   
Sbjct: 2  KLIVFEGLDGSGKTSLINSLQPQLKT---PHQLYQGLGSSSLGKEIRNLFLN--FQQVDY 56

Query: 65 EAEAIVFAAARLDHVENVIR 84
               +           + +
Sbjct: 57 LTRFYLSLTNMTQIQAELFK 76


>gi|75337416|sp|Q9SMH5|DYHC2_CHLRE RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName:
            Full=Cytoplasmic dynein heavy chain 1b; Short=cDHC1b
 gi|50831331|emb|CAB56748.2| cytoplasmic dynein heavy chain 1b [Chlamydomonas reinhardtii]
          Length = 4334

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GK+T   LL++  +R     +     P   P     R  LL     + 
Sbjct: 2029 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2081

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               ++ ++ AAAR      V++  L +   ++CD                   +++SL  
Sbjct: 2082 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2123

Query: 123  I 123
            +
Sbjct: 2124 V 2124


>gi|303324853|pdb|3IPX|A Chain A, X-Ray Structure Of Human Deoxycytidine Kinase In Complex
           With Adp And An Inhibitor
 gi|303324854|pdb|3IPY|A Chain A, X-Ray Structure Of Human Deoxycytidine Kinase In Complex
           With An Inhibitor
 gi|303324855|pdb|3IPY|B Chain B, X-Ray Structure Of Human Deoxycytidine Kinase In Complex
           With An Inhibitor
          Length = 241

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 5   ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 62

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 63  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 122

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 123 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 182

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 183 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 238


>gi|159476658|ref|XP_001696428.1| cytoplasmic dynein 1b heavy chain [Chlamydomonas reinhardtii]
 gi|158282653|gb|EDP08405.1| cytoplasmic dynein 1b heavy chain [Chlamydomonas reinhardtii]
          Length = 4333

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GK+T   LL++  +R     +     P   P     R  LL     + 
Sbjct: 2029 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2081

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               ++ ++ AAAR      V++  L +   ++CD                   +++SL  
Sbjct: 2082 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2123

Query: 123  I 123
            +
Sbjct: 2124 V 2124


>gi|114051347|ref|NP_001039509.1| UMP-CMP kinase [Bos taurus]
 gi|86826309|gb|AAI12479.1| Cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Bos taurus]
 gi|296488872|gb|DAA30985.1| UMP-CMP kinase [Bos taurus]
          Length = 228

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + +GKI+       L  R +D + A   +++           D+
Sbjct: 80  -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 187 YLQSTKPIIDLYEEMGKVRKIDASKSVDEVFDEVVKI 223


>gi|255565097|ref|XP_002523541.1| adenylate kinase, putative [Ricinus communis]
 gi|223537248|gb|EEF38880.1| adenylate kinase, putative [Ricinus communis]
          Length = 597

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 74/239 (30%), Gaps = 51/239 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   L+ +     +    D+        T   + A+  +      +   +
Sbjct: 81  ISGAPASGKGTQCELIVKKFGLVHISTGDILRAEVSAETDIGKKAKEFM---NAGQLVPD 137

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                   +RL   +   +  L++G                  R  SQ   L+ L+    
Sbjct: 138 EIVTAMVTSRLSRKDVKQKGWLLDGY----------------PRSLSQAESLEELK---- 177

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFERKDVMIHE 171
             + PD  I+LD+P +I ++R   R                            +     E
Sbjct: 178 --IRPDIYIVLDVPDEILVERCVGRRLDPLTGKIYHITNFPPETEEIKARLITRPDDTQE 235

Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           K     LDI +   +            +D + S   V   I +++ ++ + +  P+ SK
Sbjct: 236 KVNSR-LDIYKKNAEAILSTYLNIMKKIDGSRSKGVVFEEISSLLSQVQKDKEEPVKSK 293


>gi|150383501|sp|Q2KIW9|KCY_BOVIN RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
          Length = 196

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 10  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + +GKI+       L  R +D + A   +++           D+
Sbjct: 48  -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 155 YLQSTKPIIDLYEEMGKVRKIDASKSVDEVFDEVVKI 191


>gi|324997956|ref|ZP_08119068.1| thymidylate kinase [Pseudonocardia sp. P1]
          Length = 104

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 18/113 (15%)

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            A +          L+ L   +   + PD +++LD   + G             A  +  
Sbjct: 1   VAAEQIGTGPDDGELEDLARWATGGLRPDVSVLLDRAPETG--------PEPGVAGAE-- 50

Query: 163 ERKDVMIHEKRRQIFLDIARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                  H + +++         P R  +VD+A +   VA  +L+ V  L+ +
Sbjct: 51  -------HARVQRLLARTVTAHGPQRSVVVDAAGTEDDVAARVLDGVLPLLPE 96


>gi|315150530|gb|EFT94546.1| shikimate kinase [Enterococcus faecalis TX0012]
          Length = 168

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 60/205 (29%), Gaps = 41/205 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKTT    L   L+  + D                   L+           
Sbjct: 4   IVLIGFMGAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYF 48

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E    AA R    E  I   L +   +L            G            L+     
Sbjct: 49  EKYGEAAFREQ--ETQILKELSKNTAVLST----------GGGIVVGLENRSLLKSFQQ- 95

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                  I L    +  LKR++     +    ++   ++ + + E R+  + + A+    
Sbjct: 96  ------VIYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM--- 146

Query: 187 RCHIVDSA-HSFQSVATNILNIVWE 210
               +D+   S + +   IL  + E
Sbjct: 147 ---TIDTTNRSPEEIINEILQQLKE 168


>gi|307168981|gb|EFN61860.1| Adenylate kinase isoenzyme 1 [Camponotus floridanus]
          Length = 230

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 27/205 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGKTT  + +        +   +TRE             LL   V         + 
Sbjct: 39  GGPGAGKTTQSTRIAEHY---GFCTIITRE-------------LLRVEVATGSQRGVILA 82

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           +  +    V   +   L++       R L S    +G   S         +        P
Sbjct: 83  YLMSEGKLVPADVMVELIKA------RMLGSLETSRGFLLSGFPREKAQCKHFDEHIRPP 136

Query: 131 DCTIILDLPVDIGLKRVQNRY-SLRESACLDYFER-KDVMIHEKRRQIFLDIARNQPDRC 188
           D  + L +   + + R+  R  +  E    ++ E  + +  HEK  +  L   R    R 
Sbjct: 137 DLVLYLYVRESLLMDRILARTITATERQSRNFDENMQRIKDHEKMVKPILKYYRK---RL 193

Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213
            ++D  +   +V   I N +  +++
Sbjct: 194 VVIDGENDETAVFEEICNAIDNVLE 218


>gi|297592152|gb|ADI46936.1| DHC1bm [Volvox carteri f. nagariensis]
          Length = 4350

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GK+T   LL++  +R     +     P   P     R  LL     + 
Sbjct: 2038 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2090

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               ++ ++ AAAR      V++  L +   ++CD                   +++SL  
Sbjct: 2091 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2132

Query: 123  I 123
            +
Sbjct: 2133 V 2133


>gi|190890720|ref|YP_001977262.1| hypothetical protein RHECIAT_CH0001099 [Rhizobium etli CIAT 652]
 gi|190695999|gb|ACE90084.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 195

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 43/207 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64
            EG+ GAGKT     +   LQR+ Y V    RE    G     E           +    
Sbjct: 26  IEGVSGAGKT----AVAEELQRRGYHVIHGDRELAYRGDPSTGEPMVE----PAEESVAD 77

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +     A     H+ +V +      + ++ DR   S   +      +   F+D      
Sbjct: 78  RS-----AWVHAHHLWDVEKV-----RTMIVDR--RSLITFFCGGSRNLPRFVDWF---- 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                 D    LD+ +D   +R+  R               +  +  +          + 
Sbjct: 122 ------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHAT----KEDV 166

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P +   +D+      +   IL    E 
Sbjct: 167 PKQALRIDATAPLAVIVDEILAKCGEA 193


>gi|2497487|sp|Q29561|KCY_PIG RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
 gi|893400|dbj|BAA06130.1| UMP-CMP kinase [Sus scrofa]
 gi|1096714|prf||2112267A UMP-CMP kinase
          Length = 196

 Score = 53.5 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 10  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + +GKI+       L  R +D + A   +++           D+
Sbjct: 48  -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L   +       +  +   +D++ S   V   ++ I
Sbjct: 155 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 191


>gi|158317245|ref|YP_001509753.1| hypothetical protein Franean1_5492 [Frankia sp. EAN1pec]
 gi|158112650|gb|ABW14847.1| hypothetical protein Franean1_5492 [Frankia sp. EAN1pec]
          Length = 341

 Score = 53.1 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 71/232 (30%), Gaps = 36/232 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++ EG  GAGK   ++L++R                     +  R   LS   +  GA 
Sbjct: 95  LLAVEGPAGAGK---LALVRRLTAAPAALHLHLASQTDAVLRDLMRR--LSTLGEPLGAV 149

Query: 66  AEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +V AA  ++       +   L    +++ DR++ +   Y          + +   +I
Sbjct: 150 PANLVHAARLIEAAVQFRYLEEFLAGFDLVVADRWIQTWEVY----CGDLGEYTEWYLQI 205

Query: 124 SVQEVMPDCTIILDLPVDI-----------GLK--------RVQNRYSLRESACLDYFER 164
           +    +PD  + L +  ++           G          +         SA       
Sbjct: 206 ASYVPVPDLVLYLRVSPEVAAARLARRASAGQATAGHGPAGQASAGQESGGSASAGRESA 265

Query: 165 KDVMIHEKRRQIFLDIARNQPDR-----CHIVDSAHSFQSVATNILNIVWEL 211
             V      R+  ++      +      C ++D+      V   +  ++  +
Sbjct: 266 GRVDEAAALREA-VEACARYDEVMSGVDCVVIDADAPAADVLAEVTGVLDAV 316


>gi|154413997|ref|XP_001580027.1| Adenylate kinase family protein [Trichomonas vaginalis G3]
 gi|121914240|gb|EAY19041.1| Adenylate kinase family protein [Trichomonas vaginalis G3]
          Length = 264

 Score = 53.1 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 69/224 (30%), Gaps = 56/224 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI   G  G+GK T    + +               G   A E  R         E  ++
Sbjct: 78  FII--GGPGSGKGTQSEKIIQDFNA-----------GYMSAGELLRK--------EAASD 116

Query: 66  AEAIVFAAARLDHVENVIRP-----------ALMEGKIL-LCDRFLDSSYAYQGERDSSQ 113
            E     A      E  I P            L +GK + L D F               
Sbjct: 117 TELGHSIA--EQMKEGKILPQELVIGLLKKEILEQGKDVYLIDGF--------------- 159

Query: 114 HLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIH 170
              +D L     + + P    I LD+P +I  +R+  R     RE    +  + +    H
Sbjct: 160 PRAMDQLNSFE-ETITPCSAVIYLDVPDEILTERLLKRAETSGREDDNEETIKLRLEAFH 218

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                  LD  + +  +  ++D   + + V   I   +  ++ K
Sbjct: 219 T-VSAPVLDYYK-EKGKAIVIDGNRAPEEVYEEIKEKLNAVLNK 260


>gi|257888979|ref|ZP_05668632.1| deoxyguanosine kinase [Enterococcus faecium 1,141,733]
 gi|257825035|gb|EEV51965.1| deoxyguanosine kinase [Enterococcus faecium 1,141,733]
          Length = 235

 Score = 53.1 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L + L+ K         P      +     L     +++    +      
Sbjct: 9   GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119
             L      I+ A      +L DR  + DS   +                +      L  
Sbjct: 60  RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+EIS Q+  PD  + + +  +  L R++ R    E    D    +    +++  + + +
Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169

Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224
                   P    ++D    +  VA       + + ++ R   ++ + D
Sbjct: 170 WYEQFDICPK--IVIDGDK-YDFVADPTCGEKIVQEIKMRAKKMTEEAD 215


>gi|302845981|ref|XP_002954528.1| cytoplasmic dynein 1b heavy chain [Volvox carteri f. nagariensis]
 gi|300260200|gb|EFJ44421.1| cytoplasmic dynein 1b heavy chain [Volvox carteri f. nagariensis]
          Length = 4346

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GK+T   LL++  +R     +     P   P     R  LL     + 
Sbjct: 2040 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2092

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               ++ ++ AAAR      V++  L +   ++CD                   +++SL  
Sbjct: 2093 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2134

Query: 123  I 123
            +
Sbjct: 2135 V 2135


>gi|203287696|ref|YP_002222711.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia
           recurrentis A1]
 gi|201084916|gb|ACH94490.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia
           recurrentis A1]
          Length = 206

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 20/172 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++GL I  EG+ G  KTT   +L       + ++   RE                    
Sbjct: 1   MDAGLVIVIEGLIGVSKTTLGHIL-----SLDLEIPFYRELNNEFTLSMLNEFYKD-KFR 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQ 113
                  + +    R   +++V +    +GK +L D  + S   +           D+  
Sbjct: 55  WAFPMQISFLNE--RFKLIKSVFK---SKGKGIL-DISIYSDCVFASFLNDNGYISDNEY 108

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164
            ++LD L  +      P+  I LD  +     R++ R    E+    DY E+
Sbjct: 109 KIYLDLLDNMLEHSKKPELMIYLDCSIAEAENRIKKRNRSCETDISKDYLEK 160


>gi|167825668|ref|ZP_02457139.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 9]
 gi|226194201|ref|ZP_03789800.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225933666|gb|EEH29654.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 229

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 19/163 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 20  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 72

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122
           +    +  A + +     I  A      ++ D         Q     +       L    
Sbjct: 73  Q----LAFALQRERQAREIAAAHEANTPIVAD---FMPQKNQIFARLTLPDDEWQLYRSL 125

Query: 123 ---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
              +      PD  + L    ++   R+Q R    E    D +
Sbjct: 126 AAHLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 168


>gi|297592071|gb|ADI46856.1| DHC1bf [Volvox carteri f. nagariensis]
          Length = 4346

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GK+T   LL++  +R     +     P   P     R  LL     + 
Sbjct: 2040 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2092

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               ++ ++ AAAR      V++  L +   ++CD                   +++SL  
Sbjct: 2093 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2134

Query: 123  I 123
            +
Sbjct: 2135 V 2135


>gi|24114294|ref|NP_708804.1| hypothetical protein SF3033 [Shigella flexneri 2a str. 301]
 gi|30064341|ref|NP_838512.1| hypothetical protein S3234 [Shigella flexneri 2a str. 2457T]
 gi|24053451|gb|AAN44511.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30042598|gb|AAP18322.1| hypothetical protein S3234 [Shigella flexneri 2a str. 2457T]
 gi|313648104|gb|EFS12550.1| uncharacterized ATP-binding protein yghT [Shigella flexneri 2a str.
           2457T]
          Length = 230

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 72/240 (30%), Gaps = 50/240 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G + +GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDASGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108
           R+ + +         A  I    AR       +      G I+L DR+       AY G 
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127

Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155
               +     F+  L          ++     PD  I L++ +++   R     R SL  
Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +       +            +          +D+    + V  +    + + +  R
Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227


>gi|218514653|ref|ZP_03511493.1| hypothetical protein Retl8_13627 [Rhizobium etli 8C-3]
          Length = 177

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 62/207 (29%), Gaps = 43/207 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64
            EG+ GAGKT     +   LQR+ Y V    RE    G     E           +    
Sbjct: 8   IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYRGDPSTGEPMVE----PAEESATD 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +     A     H+ +V +      + ++ DR   S  ++      +   F+D      
Sbjct: 60  RS-----AWVHAHHIWDVEKV-----RTMIVDR--RSLISFFCGGSRNLPRFVDWF---- 103

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                 D    LD+ +D   +R+  R               +  +  +          + 
Sbjct: 104 ------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHAT----KEDV 148

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P +   +D+      +   IL    E 
Sbjct: 149 PKQALRIDATAPLAVIVDEILAKCGEA 175


>gi|327194847|gb|EGE61680.1| hypothetical protein RHECNPAF_100006 [Rhizobium etli CNPAF512]
          Length = 177

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 63/207 (30%), Gaps = 43/207 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64
            EG+ GAGKT     +   LQR+ Y V    RE    G     E           +    
Sbjct: 8   IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYRGDPSTGEPMVE----PAEESATD 59

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +     A     H+ +V +      + ++ DR   S  ++      +   F+D      
Sbjct: 60  RS-----AWVHAHHIWDVEKV-----RTMIVDR--RSLISFFCGGSRNLPRFVDWF---- 103

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                 D    LD+ +D   +R+  R               +  +  +      DI    
Sbjct: 104 ------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHATKEDI---- 148

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
           P +   +D+      +   IL    E 
Sbjct: 149 PKQALRIDATAPLAVIVDEILAKCGEA 175


>gi|186477242|ref|YP_001858712.1| deoxynucleoside kinase [Burkholderia phymatum STM815]
 gi|184193701|gb|ACC71666.1| deoxynucleoside kinase [Burkholderia phymatum STM815]
          Length = 231

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G GKT+    L +          +   P   P  E               A 
Sbjct: 24  YLTIEGPIGVGKTSLARRLAQRWSMH----ELFERPQDNPFLERFYR------DTSRHAL 73

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
              + FA  R    +  I      G  L+ D F+   +  +A     D    L+     +
Sbjct: 74  PTQLSFALQRAQQTQE-IAARRTAGTPLITD-FMTQKNDIFARLTLDDDEYQLYRALAAK 131

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +      PD  + L    ++   R+Q R    E    D +
Sbjct: 132 LDTPGPSPDLIVYLQASPEVLFSRIQKRAVPMELQISDAY 171


>gi|283833704|ref|ZP_06353445.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220]
 gi|291071390|gb|EFE09499.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220]
          Length = 251

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 38/178 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHV-----LLSCG 58
            I+  G +G+GK+T  + L   L+++   V   R  G       +  + +      L   
Sbjct: 14  LIAVVGCDGSGKSTLTADLVEHLEKQ--WVVERRYLGLVSGETGDKIKRLPLIGTWLERR 71

Query: 59  VDEFGAEAEAI--------------VFAAARLDHVENVIRPALMEGKILLCDRF---LDS 101
           +    ++ +++              +F+  R+  +  V R     G +++ DR+     S
Sbjct: 72  LAAKSSKTQSMSTGSPALWAILIMYIFSLRRMAKMRKVQRLT-QTGMLIIGDRYPQAEFS 130

Query: 102 SYAYQGERDSSQHLFLDSLQE-ISVQEV---------MPDCTIILDLPVDIGLKRVQN 149
            + Y G     + +    L+  ++ +E           P   I LD+ ++    R Q+
Sbjct: 131 GFHYDGPGIGIERVS-GWLKCYLAKRERQLYQKMACYRPQLIIRLDIDIETAFSRKQD 187


>gi|227889190|ref|ZP_04006995.1| deoxyadenosine kinase [Lactobacillus johnsonii ATCC 33200]
 gi|227850419|gb|EEJ60505.1| deoxyadenosine kinase [Lactobacillus johnsonii ATCC 33200]
          Length = 215

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  SLL   L  + +   V   P            +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTSLLAEHLGTQAFYEGVDNNP------------ILPLYYKDMAHYT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
              +     L+H    I  A+ +   +  DR            +DS  A           
Sbjct: 52  --FLLNTYLLNHRLAQINQAIRDHNSV-SDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R+Q R    E    D
Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154


>gi|310823434|ref|YP_003955792.1| deoxynucleoside kinase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396506|gb|ADO73965.1| Deoxynucleoside kinase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 219

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 15/155 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G GKT+  +LL      +     V   P  +          L      F  
Sbjct: 8   RYIVVEGPIGVGKTSLSNLLAERFNARRVLEVVEENPFLSSF-------YLDRQKYAFQT 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +   ++   +R    + + +  L     +  D +L   D  +A          L+    +
Sbjct: 61  QTFFLL---SRFRQQQELFQQDLFSSVTV-SD-YLFAKDRIFACLTLDSHELALYDRVFE 115

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
            +  +   PD  I L   +D+ L R++ R    E 
Sbjct: 116 ALGPRVTKPDLVIYLQARLDVLLHRIKKRGREFER 150


>gi|77736093|ref|NP_001029745.1| deoxycytidine kinase [Bos taurus]
 gi|122139964|sp|Q3MHR2|DCK_BOVIN RecName: Full=Deoxycytidine kinase; Short=dCK
 gi|75773424|gb|AAI05142.1| Deoxycytidine kinase [Bos taurus]
 gi|296486436|gb|DAA28549.1| deoxycytidine kinase [Bos taurus]
          Length = 260

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQSYACLSRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ +  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V + +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHDSLIEKVKDFL 257


>gi|9630264|ref|NP_046691.1| hypothetical protein SPBc2p139 [Bacillus phage SPBc2]
 gi|16079087|ref|NP_389910.1| nucleotide kinase; phage SPbeta [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221309934|ref|ZP_03591781.1| hypothetical protein Bsubs1_11206 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314257|ref|ZP_03596062.1| hypothetical protein BsubsN3_11132 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319179|ref|ZP_03600473.1| hypothetical protein BsubsJ_11058 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323454|ref|ZP_03604748.1| hypothetical protein BsubsS_11182 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81342014|sp|O31896|YORR_BACSU RecName: Full=SPBc2 prophage-derived uncharacterized protein yorR
 gi|2634421|emb|CAB13920.1| putative nucleotide kinase; phage SPbeta [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|3025617|gb|AAC13112.1| unknown [Bacillus phage SPbeta]
          Length = 165

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 43/205 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG +   K+T  + L + L+               P  + +   L   G ++    
Sbjct: 3   LIILEGPDCCFKSTVAAKLSKELK--------------YPIIKGSSFELAKSGNEK---- 44

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               +F     +H        L +   ++ DRF+ S+  Y  +      L    L+ I  
Sbjct: 45  ----LF-----EHFNK-----LADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIED 90

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           +       + L     +  KR++ R         +Y E KD+       +++ ++  N  
Sbjct: 91  KIKAKAKVVYLHADPSVIKKRLRVRGD-------EYIEGKDID---SILELYREVMSNAG 140

Query: 186 DRCHIVDSAH-SFQSVATNILNIVW 209
              +  D+   S   +A +I+ +V 
Sbjct: 141 LHTYSWDTGQWSSDEIAKDIIFLVE 165


>gi|4092681|gb|AAC99457.1| dynein heavy chain isoform DHC1b [Chlamydomonas reinhardtii]
          Length = 1198

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GK+T   LL++  +R     +     P   P     R  LL     + 
Sbjct: 1038 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 1090

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               ++ ++ AAAR      V++  L +   ++CD                   +++SL  
Sbjct: 1091 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 1132

Query: 123  I 123
            +
Sbjct: 1133 V 1133


>gi|6681141|ref|NP_031858.1| deoxycytidine kinase [Mus musculus]
 gi|1169273|sp|P43346|DCK_MOUSE RecName: Full=Deoxycytidine kinase; Short=dCK
 gi|12483750|gb|AAG53743.1|AF260315_1 deoxycytidine kinase [Mus musculus]
 gi|456677|emb|CAA54787.1| deoxycytidine kinase [Mus musculus]
 gi|12835866|dbj|BAB23394.1| unnamed protein product [Mus musculus]
 gi|12846337|dbj|BAB27131.1| unnamed protein product [Mus musculus]
 gi|26339272|dbj|BAC33307.1| unnamed protein product [Mus musculus]
 gi|26353146|dbj|BAC40203.1| unnamed protein product [Mus musculus]
 gi|37805359|gb|AAH60062.1| Deoxycytidine kinase [Mus musculus]
 gi|74199055|dbj|BAE30741.1| unnamed protein product [Mus musculus]
 gi|74208384|dbj|BAE26382.1| unnamed protein product [Mus musculus]
 gi|74208446|dbj|BAE26407.1| unnamed protein product [Mus musculus]
 gi|148673398|gb|EDL05345.1| deoxycytidine kinase [Mus musculus]
          Length = 260

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    V R        E    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQA--SEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ +  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTSF-DYLQEVP--VLTLDVNEDFKDKHESLVEKVKEFL 257


>gi|225713106|gb|ACO12399.1| Deoxynucleoside kinase [Lepeophtheirus salmonis]
          Length = 258

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 66/206 (32%), Gaps = 20/206 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  GAGKTT +  +K        +V    EP     A   +  L+         + 
Sbjct: 41  IVVEGNIGAGKTTFLQDIKELSPPGLIEVI--EEPVDEWQAYKDKFNLMDMMYQ--DPKK 96

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDSSQHLFLDS 119
            + +F       +    +       I + +R L S       +    G  + ++   L+ 
Sbjct: 97  WSFLFQVQVQLSMMKKYKTPYSRP-IRIMERSLLSARFCFVENLYNNGFLEDAELHMLND 155

Query: 120 LQEISVQE----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           L    ++        D  + L    +   +R+  R   +    L Y   + V IHE    
Sbjct: 156 LYNFVIEHDCFICQTDLIVYLRTSPETAYQRMLQRSRSKAEKALPY--NQFVQIHELHED 213

Query: 176 IFLDIARNQP--DRCHIVDSAHSFQS 199
                 + QP   R  ++D     + 
Sbjct: 214 WLFRKTKFQPLSSRVVVIDGDEELEK 239


>gi|57640588|ref|YP_183066.1| signal recognition particle GTPase [Thermococcus kodakarensis KOD1]
 gi|57158912|dbj|BAD84842.1| signal recognition particle GTPase [Thermococcus kodakarensis KOD1]
          Length = 342

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  G+GKTT I+ L  +L++  + V +      T  A A     L       G + 
Sbjct: 148 IAFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQ--LEEHAKRVGVKV 203

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R+      +D +++I+ 
Sbjct: 204 IKHDYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRNELNRNLMDEMKKIA- 253

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 254 RVTKPDLVIF 263


>gi|255571119|ref|XP_002526510.1| uridylate kinase plant, putative [Ricinus communis]
 gi|223534185|gb|EEF35901.1| uridylate kinase plant, putative [Ricinus communis]
          Length = 210

 Score = 53.1 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 66/220 (30%), Gaps = 57/220 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        Y            A +  R  + S   +          
Sbjct: 29  GGPGSGKGTQCANIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 68

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 69  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 112

Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +    ++P+  +  D   +   +R+ +R   R    ++   ++  +  E      
Sbjct: 113 NRAAFESVTKIVPEFVLFFDCSEEEMERRLLSRNQGRVDDNIETIRKRFKVFLESSIPVV 172

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +         +   +D+A S + V  ++  I  +  +K
Sbjct: 173 EYY-----ESKGKVRKIDAAKSIEEVFEDVKAIFAQKDEK 207


>gi|327401640|ref|YP_004342479.1| signal recognition particle-docking protein FtsY [Archaeoglobus
           veneficus SNP6]
 gi|327317148|gb|AEA47764.1| signal recognition particle-docking protein FtsY [Archaeoglobus
           veneficus SNP6]
          Length = 376

 Score = 52.7 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L + L  + Y V +    G T  A A     L    +  G + 
Sbjct: 184 IIFVGVNGTGKTTTIAKLAKRLTDRGYSVVLAA--GDTFRAGAIEQ--LEEHANRLGVKL 239

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I  A  +G  ++L D            R  ++   +D L++I  
Sbjct: 240 IKHKAGADPAAVIYDAIAHAESKGIDVVLAD---------TAGRMHTKKNLIDQLEKI-K 289

Query: 126 QEVMPDCTIILD 137
           +   PD TI +D
Sbjct: 290 RVTKPDLTIFVD 301


>gi|293378645|ref|ZP_06624805.1| deoxynucleoside kinase [Enterococcus faecium PC4.1]
 gi|292642776|gb|EFF60926.1| deoxynucleoside kinase [Enterococcus faecium PC4.1]
          Length = 235

 Score = 52.7 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 38/199 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L + L+ K         P      +     L     +++    +      
Sbjct: 9   GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119
             L      I+ A      +L DR  + DS   +                +      L  
Sbjct: 60  RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+EIS Q+  PD  + + +  +  L R++ R    E    D    +    +++  + + +
Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169

Query: 180 IARNQ---PDRCHIVDSAH 195
                   P    ++D   
Sbjct: 170 WYEQFDICPK--IVIDGDK 186


>gi|227551105|ref|ZP_03981154.1| deoxyguanosine kinase [Enterococcus faecium TX1330]
 gi|257893861|ref|ZP_05673514.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408]
 gi|257896728|ref|ZP_05676381.1| deoxynucleoside kinase [Enterococcus faecium Com12]
 gi|227179766|gb|EEI60738.1| deoxyguanosine kinase [Enterococcus faecium TX1330]
 gi|257830240|gb|EEV56847.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408]
 gi|257833293|gb|EEV59714.1| deoxynucleoside kinase [Enterococcus faecium Com12]
          Length = 239

 Score = 52.7 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 38/199 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L + L+ K         P      +     L     +++    +      
Sbjct: 13  GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 63

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119
             L      I+ A      +L DR  + DS   +                +      L  
Sbjct: 64  RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 117

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L+EIS Q+  PD  + + +  +  L R++ R    E    D    +    +++  + + +
Sbjct: 118 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 173

Query: 180 IARNQ---PDRCHIVDSAH 195
                   P    ++D   
Sbjct: 174 WYEQFDICPK--IVIDGDK 190


>gi|268320241|ref|YP_003293897.1| deoxynucleoside kinase [Lactobacillus johnsonii FI9785]
 gi|262398616|emb|CAX67630.1| deoxynucleoside kinase [Lactobacillus johnsonii FI9785]
          Length = 215

 Score = 52.7 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  SLL   L  + +   V   P            +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTSLLAEHLGTQAFYEGVDNNP------------ILPLYYKDMAHYT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
              +     L+H    I  A+ +   +  DR            +DS  A           
Sbjct: 52  --FLLNTYLLNHRLAQINQAIRDHNSV-SDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R+Q R    E    D
Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154


>gi|154422787|ref|XP_001584405.1| Adenylate kinase family protein [Trichomonas vaginalis G3]
 gi|121918652|gb|EAY23419.1| Adenylate kinase family protein [Trichomonas vaginalis G3]
          Length = 218

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 78/224 (34%), Gaps = 41/224 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++  FI   G  G+GK T  +++    +            G     +  R  +      
Sbjct: 1   MSTKDFIFVLGGPGSGKGTQSAVIA---KEYGI--------GYLSTGDLLRETIKKLENP 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
                 E +       + ++N     L++ K ++           +      +H F+D  
Sbjct: 50  PKDMSEEELNKIKELAEIMKN---GGLVDDKTVI------DLIKKKMSSSKEEHWFIDGF 100

Query: 119 -----SLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                  +  + +   P  T + +++P D+ + R+  R     S   D  + ++ +  +K
Sbjct: 101 PRKMSQCEAFAAELGEP-VTCLYINVPEDVLINRLLKRGET--SGRAD--DNEEAI--KK 153

Query: 173 RRQIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVWE 210
           R + +++    +  +   +  +  +D   S   V  + +  + +
Sbjct: 154 RLKTYIEESQPVIEHYKGKGKVAEIDGNRSIDQVHESCVEAIKK 197


>gi|311262318|ref|XP_003129122.1| PREDICTED: deoxycytidine kinase-like isoform 1 [Sus scrofa]
          Length = 260

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R             +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQNEFEELTTSQKSGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQSYACLSRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ +  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+   ++++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHSSLVEKVKEFL 257


>gi|255065184|ref|ZP_05317039.1| deoxynucleoside kinase family protein [Neisseria sicca ATCC 29256]
 gi|261364726|ref|ZP_05977609.1| hypothetical protein NEIMUCOT_04967 [Neisseria mucosa ATCC 25996]
 gi|255050605|gb|EET46069.1| deoxynucleoside kinase family protein [Neisseria sicca ATCC 29256]
 gi|288567024|gb|EFC88584.1| deoxynucleoside kinase family protein [Neisseria mucosa ATCC 25996]
          Length = 211

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 15/151 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G+GK      L       +    +   P   P       ++          
Sbjct: 4   RYIVVEGSIGSGKNALSRRLAEHFSALS----LAENPEHNPF------LMKFYANASHHG 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
            A  + F   R + V ++I+    +G +++ D FL   D  +      +  Q LF D  Q
Sbjct: 54  LATELFFLMRRAESV-DIIKNEYAQGGMVVAD-FLLEKDRIFTPVVLNEDEQQLFADLKQ 111

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           +I  Q   PD  I L   VD   KR+Q R  
Sbjct: 112 KILPQYPAPDLVIYLQTAVDGNRKRLQKRGD 142


>gi|124027583|ref|YP_001012903.1| hypothetical protein Hbut_0703 [Hyperthermus butylicus DSM 5456]
 gi|123978277|gb|ABM80558.1| hypothetical protein Hbut_0703 [Hyperthermus butylicus DSM 5456]
          Length = 196

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 54/172 (31%), Gaps = 7/172 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L I FEG  G GKTT   LL   L+R+     V           A     L     
Sbjct: 1   MADRLLIVFEGGPGIGKTTLSRLLAELLERRGRKTCVV---WDAVRGIAPVLSRLFGEWY 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E    +F   +L  +   +     +   ++ D  +++  AY           L+ L
Sbjct: 58  RAPRELIEYMFLGYQLRRLHECVE---ADTDTVILDYGVEAPLAYMEADGVPYPKELEEL 114

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            E  +         IL+ PV      V+     R          + + + E+
Sbjct: 115 AEAVLSGWR-VVVFILEQPVAYSTDVVRWEDPRRAQGYARRLIARALSLVER 165


>gi|329668131|gb|AEB94079.1| deoxyadenosine kinase [Lactobacillus johnsonii DPC 6026]
          Length = 215

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  SLL   L  +             P                F    
Sbjct: 4   IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 56

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
             +     RL  +   IR         + DR            +DS  A           
Sbjct: 57  YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R+Q R    E    D
Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154


>gi|220906738|ref|YP_002482049.1| adenylate kinase [Cyanothece sp. PCC 7425]
 gi|254806984|sp|B8HMS3|KAD_CYAP4 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|219863349|gb|ACL43688.1| adenylate kinase [Cyanothece sp. PCC 7425]
          Length = 195

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 76/217 (35%), Gaps = 30/217 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDE 61
             I F G  GAGK T    L   L   +    D+        TP  +  +  L S  +  
Sbjct: 3   RLILF-GPPGAGKGTQAKHLVDLLDIPHISTGDIFRAAVRNQTPLGQQVQAYLDSGRLVP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +       H  +V +  +++G            +     +  +    L  + 
Sbjct: 62  D----ELTINLIQERLHQSDVQKGWILDG------------FPRTLAQAEALEKLLHQIN 105

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLD 179
           +        D  + L +P ++  +R+  R   +ES   D  E  +K + ++ K     LD
Sbjct: 106 QPY------DRVLSLTVPEEVLTQRLVLRAE-KESRKDDTPEVIQKRLGVYWKDTAPLLD 158

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             RNQ  R   +D       V   I +IV +L  +++
Sbjct: 159 FYRNQ-QRLATIDGNQPESDVTAQIQHIVDQLKGEKI 194


>gi|116630402|ref|YP_819555.1| deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323]
 gi|311111601|ref|ZP_07712998.1| deoxyadenosine kinase [Lactobacillus gasseri MV-22]
 gi|116095984|gb|ABJ61136.1| Deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323]
 gi|311066755|gb|EFQ47095.1| deoxyadenosine kinase [Lactobacillus gasseri MV-22]
          Length = 216

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  SLL   L  +             P                F    
Sbjct: 5   IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 57

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
             +     RL  +   IR         + DR            +DS  A           
Sbjct: 58  YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 108

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R+Q R    E    D
Sbjct: 109 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRTFEQLSTD 155


>gi|321466350|gb|EFX77346.1| hypothetical protein DAPPUDRAFT_305834 [Daphnia pulex]
          Length = 224

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 69/218 (31%), Gaps = 41/218 (18%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEF 62
           F+   EG  G+GK++ ++  + +       V +  EP          ++L  L    +++
Sbjct: 12  FVVSVEGNIGSGKSSFLTHFQSY-----PGVKIYSEPVEDWCDVGGHNLLALLYSNPEKW 66

Query: 63  GAEAEAIVFAAARLDHVE------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-- 114
               ++ V  +     ++       +I  +L         RF       Q    S     
Sbjct: 67  SFAFQSTVQLSRLNIILQPTNANIKMIERSLQNN------RFCFLEIGKQMGALSPPEYA 120

Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
               + + L++ +   +  D  + L    ++  +R++NR    E+          +    
Sbjct: 121 VLTKWYEWLEKKADIGL--DLIVYLRTSPEVAHQRMKNRKRPEENEVP-------LSYIT 171

Query: 172 KRRQIFLDIARNQ-------PDRCHIVDSAHSFQSVAT 202
                +              P    I+D+  S + V  
Sbjct: 172 LVHDCYESWLVGDGQTTPNCPAPVLILDANRSLEEVFQ 209


>gi|300362721|ref|ZP_07058896.1| deoxyadenosine kinase [Lactobacillus gasseri JV-V03]
 gi|300353149|gb|EFJ69022.1| deoxyadenosine kinase [Lactobacillus gasseri JV-V03]
          Length = 215

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  SLL   L  +             P                F    
Sbjct: 4   IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 56

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
             +     RL  +   IR         + DR            +DS  A           
Sbjct: 57  YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R+Q R    E    D
Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRTFEQLSTD 154


>gi|238852758|ref|ZP_04643164.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4]
 gi|238834608|gb|EEQ26839.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4]
          Length = 215

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  SLL   L  +             P                F    
Sbjct: 4   IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 56

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
             +     RL  +   IR         + DR            +DS  A           
Sbjct: 57  YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R+Q R    E    D
Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRTFEQLSTD 154


>gi|58338190|ref|YP_194775.1| deoxyadenosine kinase [Lactobacillus acidophilus NCFM]
 gi|227902623|ref|ZP_04020428.1| deoxyadenosine kinase [Lactobacillus acidophilus ATCC 4796]
 gi|108936024|sp|P0C1F9|DGK1_LACAC RecName: Full=Deoxyadenosine kinase; Short=DADO kinase; Short=DAK;
           AltName: Full=Deoxynucleoside kinase complex I
           S-component
 gi|58255507|gb|AAV43744.1| deoxyadenosine kinase [Lactobacillus acidophilus NCFM]
 gi|227869616|gb|EEJ77037.1| deoxyadenosine kinase [Lactobacillus acidophilus ATCC 4796]
          Length = 215

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL-----------DSSYAYQGERDSSQHL 115
              +     L+H    I  A+ E   +  DR +           DSS A         + 
Sbjct: 53  --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSSVA-DPTEFKIYND 108

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  LKR++ R    E    D
Sbjct: 109 LLENMMEDTPGNPSKKPDLLIYIHVSLDTMLKRIKKRGRSFEQISTD 155


>gi|218462065|ref|ZP_03502156.1| hypothetical protein RetlK5_22433 [Rhizobium etli Kim 5]
          Length = 212

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 65/208 (31%), Gaps = 47/208 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64
            EG+ GAGKT     +   LQR+ Y V    RE    G     +           +    
Sbjct: 43  IEGVSGAGKT----AVADELQRRGYHVVHGDRELAYRGDPTTGKPLDE----PADESVAD 94

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +     A     H+ +V       GK+  ++ DR   S  ++      +   F+D    
Sbjct: 95  RS-----AWVHAHHIWDV-------GKVRAMIVDR--RSLISFFCGGCRNLPRFVDWF-- 138

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                   D    LD+ +D   +R+  R            ER  +M      +       
Sbjct: 139 --------DAVFELDVDLDTLKRRLAARPEDEYGGRPA--ERALIMRLHATNE------- 181

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + P     +D+      +   IL+   E
Sbjct: 182 DVPKHAQRIDATAPLAVIVDEILSKCGE 209


>gi|56479472|ref|YP_161061.1| deoxynucleoside kinase [Aromatoleum aromaticum EbN1]
 gi|56315515|emb|CAI10160.1| Deoxynucleoside kinase [Aromatoleum aromaticum EbN1]
          Length = 213

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 74/233 (31%), Gaps = 36/233 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++   +I  EG  GAGKT+    L   L     D  + +           +         
Sbjct: 2   LDKARYIVIEGPIGAGKTSLARRLAERLDA---DTVLEQPEQNAFLGRFYQDPQRWALPT 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117
           +         F   R+D +  +   A    +I+   + D   D  +A     D    L+ 
Sbjct: 59  QLS-------FLFQRVDQLAALAERADAHPRIVSDFILD--KDPLFATLNLADDELALYR 109

Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                +    V  PD  I L    +  ++R++ R    E    + +        E+  + 
Sbjct: 110 RIFDSMQPAAVRHPDLVIYLQAKPETLVERIRRRGVESERRITERY-------LEQVAER 162

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-----ELVQKRVSPLSSKKD 224
           +     +        D+A     V   ILN V      EL+  R+  +   ++
Sbjct: 163 YARFFYDY-------DAA-PLFVVDAEILNPVEQDDDFELLLDRLRNMRGYRE 207


>gi|257082544|ref|ZP_05576905.1| shikimate kinase [Enterococcus faecalis E1Sol]
 gi|257086738|ref|ZP_05581099.1| shikimate kinase [Enterococcus faecalis D6]
 gi|257416099|ref|ZP_05593093.1| shikimate kinase [Enterococcus faecalis AR01/DG]
 gi|256990574|gb|EEU77876.1| shikimate kinase [Enterococcus faecalis E1Sol]
 gi|256994768|gb|EEU82070.1| shikimate kinase [Enterococcus faecalis D6]
 gi|257157927|gb|EEU87887.1| shikimate kinase [Enterococcus faecalis ARO1/DG]
 gi|315027260|gb|EFT39192.1| shikimate kinase [Enterococcus faecalis TX2137]
 gi|315169734|gb|EFU13751.1| shikimate kinase [Enterococcus faecalis TX1342]
          Length = 168

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR++     +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIKEDTENQRPLAIERSSKEIIALFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIINEILQQLKE 168


>gi|225873841|ref|YP_002755300.1| deoxynucleoside kinase family protein [Acidobacterium capsulatum
           ATCC 51196]
 gi|225794396|gb|ACO34486.1| deoxynucleoside kinase family protein [Acidobacterium capsulatum
           ATCC 51196]
          Length = 213

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 29/177 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F++ EG    GK++  ++L   +Q +        EP   P         L         
Sbjct: 9   RFVAVEGPLRVGKSSLAAILAERMQARRIT-----EPEDNPF--------LDRFYQAQSG 55

Query: 65  EAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119
            A A  + F   R   +  +   +      ++ D +L   D  +AY    D+   L+   
Sbjct: 56  MAFATQMWFLKERHAQMSELTDFS----TPVVAD-YLFEKDKLFAYLNLSDAELDLYRHY 110

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFER-----KDVMIH 170
            Q +      PD  + L    ++  +R++ +    E A  D Y E+     +    H
Sbjct: 111 YQMLRASIPTPDLVVYLQATPEVLKQRLRRKGVPGERAISDAYIEQVVEAYEHFFFH 167


>gi|54696744|gb|AAV38744.1| deoxycytidine kinase [Homo sapiens]
 gi|54696746|gb|AAV38745.1| deoxycytidine kinase [Homo sapiens]
 gi|61357638|gb|AAX41419.1| deoxycytidine kinase [synthetic construct]
 gi|61357644|gb|AAX41420.1| deoxycytidine kinase [synthetic construct]
          Length = 260

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 40/240 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGV---- 59
           IS EG   AGK+T +++LK+  +   ++V    V R        +    + +S       
Sbjct: 24  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKI-------------LLCDRFLDSSY 103
                 + E   F       +   IR  L    GK+             +  DR++ +S 
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSR-IRAQLASLNGKLKDAEKSVLFFERSVYSDRYIFASN 140

Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157
            Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E   
Sbjct: 141 LYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGI 200

Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 201 PLEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|20091018|ref|NP_617093.1| hypothetical protein MA2176 [Methanosarcina acetivorans C2A]
 gi|19916107|gb|AAM05573.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 223

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 26/126 (20%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV--------HVTREP--GGTPAAEA 49
           MN   +FI   GI+G GKTTH++L+  +L+ K            +    P       A  
Sbjct: 1   MNQKPMFICITGIDGVGKTTHVNLIMGYLREKGIKCQYKWLRSHYFFSLPLLAFCRIAGY 60

Query: 50  ARHVLLSCGVDEFGAEAEA------------IVFAAARLDHVENVIRPALMEGKILLCDR 97
            R   L  G  +  +  E             I+F    L     V  P    G  ++CDR
Sbjct: 61  TRVSTL--GDSQKCSYHEFYKSRFVSAFYPWILFFDTLLFTTIKVYIPMFF-GTSIVCDR 117

Query: 98  FLDSSY 103
           F+  + 
Sbjct: 118 FVYDTL 123


>gi|111115064|ref|YP_709682.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia afzelii
           PKo]
 gi|110890338|gb|ABH01506.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia afzelii
           PKo]
          Length = 200

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L + L+     V    E                     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSKELK-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   I LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|283833706|ref|ZP_06353447.1| hypothetical ATP-binding protein YghT [Citrobacter youngae ATCC
           29220]
 gi|291071392|gb|EFE09501.1| hypothetical ATP-binding protein YghT [Citrobacter youngae ATCC
           29220]
          Length = 241

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 77/249 (30%), Gaps = 68/249 (27%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVL---LSCGVD 60
            I+  G +G+GK++    L  FLQ+      VH+ ++ G    A     +L   L+  + 
Sbjct: 8   LIAVIGSDGSGKSSVCEHLIIFLQKYGPATQVHLGKQAGNVERAVIKIPLLGRILNKKIS 67

Query: 61  EF---------GAEAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSY--AYQGE 108
           +          G     ++ +             AL   G I+L DRF  +    AY G 
Sbjct: 68  KHKVKDAKKLPGPVPALVITSFVIRRVFRFRRMLALRQRGMIILADRFPQTQIPGAYDGT 127

Query: 109 ---RDSSQHLFLDSLQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
               + +   F+  L  +            PD  I L++ +D+   R             
Sbjct: 128 VFPANVTGSAFVSWLAGLERSAFAWMTRHKPDLVIKLNVDLDVACAR-----------KP 176

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHI-------------VDSAHSFQSVATNILN 206
           D         H +       +A+       +             +D+    + V  +   
Sbjct: 177 D---------HRR-----ESLAKK----IAVTPQLTFDGAPLVDIDANMPLEEVLRDTEA 218

Query: 207 IVWELVQKR 215
            V   +  R
Sbjct: 219 AVARFMAAR 227


>gi|222152336|ref|YP_002561511.1| deoxyadenosine kinase protein [Streptococcus uberis 0140J]
 gi|222113147|emb|CAR40569.1| putative deoxyadenosine kinase protein [Streptococcus uberis 0140J]
          Length = 213

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 78/238 (32%), Gaps = 51/238 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     +V         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117
           +  A +     L+     I+ A      +L DR +       +  Y+    +   L +  
Sbjct: 47  KKYAFLLQIFFLNKRFKSIKEAYKADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQ 105

Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167
               + L+E+  + +  PD  I +D+  D  L+R++ R           FE+ D      
Sbjct: 106 ELLGNMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRS--------FEQVDDNPGLE 157

Query: 168 MIHEKRRQIFLDIARNQPDRCHI-----VDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
             + +    + D      +  H+     +D       V   + L  V E+V  ++  L
Sbjct: 158 DYYAQVHGEYPDWY----ENYHVSPKMKIDGNQ-LDFVQNPDDLKTVLEMVDTKLKEL 210


>gi|216264245|ref|ZP_03436237.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 156a]
 gi|218249730|ref|YP_002374762.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi ZS7]
 gi|221217724|ref|ZP_03589192.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 72a]
 gi|223888754|ref|ZP_03623345.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 64b]
 gi|224532635|ref|ZP_03673256.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi WI91-23]
 gi|224533763|ref|ZP_03674351.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi
           CA-11.2a]
 gi|225549058|ref|ZP_03770033.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 94a]
 gi|225550072|ref|ZP_03771032.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 118a]
 gi|226321557|ref|ZP_03797083.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi Bol26]
 gi|215980718|gb|EEC21525.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 156a]
 gi|218164918|gb|ACK74979.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi ZS7]
 gi|221192401|gb|EEE18620.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 72a]
 gi|223885570|gb|EEF56669.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 64b]
 gi|224512415|gb|EEF82795.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi WI91-23]
 gi|224513056|gb|EEF83419.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi
           CA-11.2a]
 gi|225369184|gb|EEG98637.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 118a]
 gi|225370284|gb|EEG99722.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 94a]
 gi|226232746|gb|EEH31499.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi Bol26]
 gi|312148290|gb|ADQ30949.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi JD1]
 gi|312149703|gb|ADQ29774.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi N40]
          Length = 201

 Score = 52.7 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 21/167 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I  EG+ G GKTT  ++L + L+     V    E                     F  
Sbjct: 1   MVIVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPV 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFL 117
           +   I F   R   ++ V R    +G   + DR +     +           D    +++
Sbjct: 56  Q---INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYI 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           D L  +      P   + LD  +D   +R++NR    E     DY E
Sbjct: 108 DLLDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 154


>gi|13162355|ref|NP_077072.1| deoxycytidine kinase [Rattus norvegicus]
 gi|1352235|sp|P48769|DCK_RAT RecName: Full=Deoxycytidine kinase; Short=dCK
 gi|508570|gb|AAA65098.1| deoxycytidine kinase [Rattus norvegicus]
          Length = 260

 Score = 52.3 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 88/241 (36%), Gaps = 42/241 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA------RLDH------VENVIRPALMEGKILLCDRFLDSS 102
           L    ++   E  + +F +       R         + +  +P L   + +  DR++ +S
Sbjct: 82  LQMMYEK--PERWSFIFQSYACLSRIRAQLASLNGSLRDAEKPVLFFERSVYSDRYIFAS 139

Query: 103 YAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
             Y+ +  +     +     D +     Q +  D  I L    +  L R+  R    E  
Sbjct: 140 NLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYIRGRDEEQG 199

Query: 158 -CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             L+Y E+     +  ++H   +  F  + +  P     +D    F+    +++  V E 
Sbjct: 200 IPLEYLEKLHYKHESWLLHRTLKTNFEYL-QEVP--ILTLDVNLDFKDKEESLVEKVKEF 256

Query: 212 V 212
           +
Sbjct: 257 L 257


>gi|89889557|ref|ZP_01201068.1| putative deoxyguanosine kinase [Flavobacteria bacterium BBFL7]
 gi|89517830|gb|EAS20486.1| putative deoxyguanosine kinase [Flavobacteria bacterium BBFL7]
          Length = 341

 Score = 52.3 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 70/212 (33%), Gaps = 25/212 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  G+GKT+    +      K         P            L     + +   
Sbjct: 145 FIAIEGNIGSGKTSLSHKIAEDFNGKQVLERFADNPFLP---------LFYKDTERYAFP 195

Query: 66  AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122
            E   F A R   + ++V +  L     +  D ++  S  +       +   L       
Sbjct: 196 LEMS-FLADRYQQLSDDVAQQDLFSEFTV-ADYYVIKSLIFSKITLEKEEYSLYKRLFNM 253

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  + V PD  I L    D  L+ ++ R    E          +     + +Q + D  R
Sbjct: 254 MYKELVKPDLYIYLYQTEDRLLQNIKKRGRDYEQNI-------EASYLSQIQQGYADFIR 306

Query: 183 NQPD-RCHIVDSAHSFQSV--ATNILNIVWEL 211
           +Q D +  ++D       V    + L ++ ++
Sbjct: 307 SQQDLKIKVIDVT-DLDFVNNQEDYLKVLEQI 337


>gi|42519873|ref|NP_965803.1| deoxyadenosine kinase [Lactobacillus johnsonii NCC 533]
 gi|81667316|sp|Q74HC3|DGK1_LACJO RecName: Full=Deoxyadenosine kinase; Short=DADO kinase; Short=DAK;
           AltName: Full=Deoxynucleoside kinase complex I
           S-component
 gi|403983|gb|AAB09750.1| deoxyadenosine kinase [Lactobacillus acidophilus]
 gi|41584163|gb|AAS09769.1| deoxyadenosine kinase [Lactobacillus johnsonii NCC 533]
          Length = 215

 Score = 52.3 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  SLL   L  + +   V   P            +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTSLLAEHLGTQAFYEGVDNNP------------ILPLYYKDMAHYT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
              +     L+H    I  A+ +   +  DR            +DS  A           
Sbjct: 52  --FLLNTYLLNHRLAQINQAIRDHNSV-SDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R+Q R    E    D
Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154


>gi|291414461|ref|XP_002723474.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10
           [Oryctolagus cuniculus]
          Length = 357

 Score = 52.3 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 82/244 (33%), Gaps = 37/244 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58
             I+ +G   +GK      +   L  K++          T        +  S G      
Sbjct: 60  KVITVDGNICSGKGKLAEQIAEKLGLKHFPEAGIHYADSTTGDGRPLDLQFSGGCSLEKF 119

Query: 59  ------VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106
                  D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      Q
Sbjct: 120 YDDPKSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFVEAMHSQ 178

Query: 107 GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           G          + ++++++ E + P   I +D+PV     R+Q + +  E          
Sbjct: 179 GYIRKQCVEHYNQVKKVTICEYLPPHVAIYIDVPVPEIQSRIQKKGNPHEMKI------- 231

Query: 166 DVMIHEKRRQIFLD-IARNQPDRCHIV--DS--AHSFQSVATNILNIVWELVQKRVSPLS 220
                +     +         ++C ++  D+  A     V  +I     E ++    P  
Sbjct: 232 TAAYLQDIENAYKKTFLPEMSEKCEVLQYDAREAQDADKVVEDI-----EYLKCDKGPWL 286

Query: 221 SKKD 224
           S+ D
Sbjct: 287 SQDD 290


>gi|218513048|ref|ZP_03509888.1| thymidylate kinase [Rhizobium etli 8C-3]
          Length = 51

 Score = 52.3 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 26/35 (74%)

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           FLDIA  +P+RCH+V++  + +++A  IL IV +L
Sbjct: 1   FLDIAAREPERCHVVNAMQTEEAIAAQILAIVKQL 35


>gi|118488800|gb|ABK96210.1| unknown [Populus trichocarpa]
          Length = 199

 Score = 52.3 bits (125), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 63/209 (30%), Gaps = 49/209 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        Y            A +  R  + S   +          
Sbjct: 18  GGPGSGKGTQCANIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDS---SQHLFLDSLQEIS 124
                      +I+  + EGKI+  +  +  +    A Q   +          +     +
Sbjct: 58  ----------TMIQNMIKEGKIVPSE--VTINLLQKAMQDSGNDKFLIDGFPRNEENRAA 105

Query: 125 VQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178
            +    + P   +  D P +   +R+ +R   RE   ++   ++  +  E      + + 
Sbjct: 106 FEAVTKIEPAFVLFFDCPEEEMERRILSRNQGREDDNIETIRKRFKVFLESSLPVVEYY- 164

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207
               +   +   VD+A     V   +  I
Sbjct: 165 ----DSKGKVQKVDAAKPIDEVFEVVKAI 189


>gi|148705024|gb|EDL36971.1| thymidylate kinase family LPS-inducible member, isoform CRA_b [Mus
           musculus]
          Length = 272

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 73  QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 125

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 126 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 178

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 179 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 230

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 231 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 268


>gi|300710513|ref|YP_003736327.1| adenylate kinase [Halalkalicoccus jeotgali B3]
 gi|299124196|gb|ADJ14535.1| adenylate kinase [Halalkalicoccus jeotgali B3]
          Length = 207

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 53/231 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  GAGK T  S +         +   T         +A R        +     
Sbjct: 7   LIV--GAPGAGKGTQSSNIAE---EYGVEHVTT--------GDALRAN-KDTETEYGTPR 52

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                      + V  ++R AL        D ++   Y     R+ SQ  +L+ + ++  
Sbjct: 53  EYMETGELVPDELVNEIVREALES-----ADGYVLDGY----PRNESQVEYLEGITDL-- 101

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--------------LDYFERKDVMIHE 171
                D  + LD+  +  + R+  R    E+                 +   ++D    +
Sbjct: 102 -----DVILYLDVAEEELVHRLTGRRVDPETGENYHTEFDMPDDEAVRERLVQRDDDTED 156

Query: 172 KRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             ++    F +                 +D   S   V  +I   + E V+
Sbjct: 157 TVKERLRVFEENTAPVIEHYEDHAGFVRIDGEGSPDEVWADIEAAIDERVR 207


>gi|225708776|gb|ACO10234.1| Deoxynucleoside kinase [Caligus rogercresseyi]
          Length = 233

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 32/225 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +  EG   +GKTT + L +  L   +    V V  EP          ++L    +     
Sbjct: 6   VCVEGNIASGKTTFLKLFEAGLSGCKSGPSVRVVEEPVSAWQNLHGHNIL---ELMYKDP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YA--------YQGERDSSQ 113
                +F +         +     + +I L +R L ++   +A          G      
Sbjct: 63  SRWGHLFQSYVA-LTMTQVHTMRAKEEIKLMERSLLTAEKCFAANLYNSGNMSGAEYRVL 121

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEK 172
             +   L      +V+PD  + L    +  LKRV +R    ES   LDY  R+   +HE 
Sbjct: 122 KEWYAYLNAYHKMKVLPDLIVYLQTTPETCLKRVISRSRHEESTIPLDYL-RELHELHEA 180

Query: 173 RRQIFLDIARNQPDR--CHIVDSA-----HSFQSVATNILNIVWE 210
                  + ++   +    +VD+       S ++    +LN + +
Sbjct: 181 C------LIQDSSLKVPVLVVDAENNNFLLSPETSFKPVLNQIMD 219


>gi|30690243|ref|NP_850867.1| PYR6; cytidylate kinase/ uridylate kinase [Arabidopsis thaliana]
 gi|117958619|gb|ABK59674.1| At5g26667 [Arabidopsis thaliana]
 gi|332006175|gb|AED93558.1| Uridylate kinase [Arabidopsis thaliana]
          Length = 208

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 57/220 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +                     A +  R  + S   +          
Sbjct: 21  GGPGSGKGTQCAYIVEH-----------YGYTHLSAGDLLRAEIKSGSENG--------- 60

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 61  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAIQENGNDKFLIDGFPRNEE 104

Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +   E+ P   +  D P +   KR+  R   RE   ++   ++  +  E      
Sbjct: 105 NRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVI 164

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +         +   +++A   ++V   +  I     +K
Sbjct: 165 HYY-----EAKGKVRKINAAKPIEAVFEEVKAIFSPEAEK 199


>gi|15668466|ref|NP_247264.1| signal recognition particle, receptor [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2500888|sp|Q57739|Y291_METJA RecName: Full=Probable signal recognition particle protein MJ0291
 gi|1591013|gb|AAB98276.1| signal recognition particle, receptor [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 409

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ L   L++K Y V +    G T  A A     L       G + 
Sbjct: 205 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNVGVKV 260

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A   G  ++L D            R ++    ++ +++  V
Sbjct: 261 IKHKPGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNVNLMEEIKK-VV 310

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 311 RVTKPDLVIF 320


>gi|37574004|gb|AAH52004.2| Deoxycytidine kinase [Mus musculus]
          Length = 260

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    V R        E    +         +
Sbjct: 24  ISIEGNIAAGKSTSVNILKQA--SEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ +  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTSF-DYLQEVP--VLTLDVNEDFKDKHESLVEKVKEFL 257


>gi|167037736|ref|YP_001665314.1| guanylate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|320116151|ref|YP_004186310.1| guanylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166856570|gb|ABY94978.1| Guanylate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929242|gb|ADV79927.1| guanylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 207

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 41/214 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  GAGK T    L +  +     +   TR+P      E   +   S    
Sbjct: 6   KKGLLIVLSGPSGAGKGTICKALMKKEKNLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   E ++ +  A   DH     ++ +   L EG  ++                    L 
Sbjct: 65  EKMIENDSFLEWAKVYDHYYGTPKDFVLKNLEEGNDVV--------------------LE 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +D    + ++E  P+   I  LP   +    R++ R +  E   +  F+           
Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + ++         +++   S +     I  I+
Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIKAII 185


>gi|146103035|ref|XP_001469469.1| adenylate kinase [Leishmania infantum]
 gi|134073839|emb|CAM72578.1| putative adenylate kinase [Leishmania infantum JPCM5]
          Length = 220

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 72/236 (30%), Gaps = 56/236 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKR-----FLQRKN--YDVHVTREPGGTPAAEAARHVLLSC 57
           LFI   G  G+GK T   LL +      L   N   +  + + P G   AE      L  
Sbjct: 3   LFIILFGPPGSGKGTVSHLLVKEYGFVHLSAGNLLREEVLKKSPLGLRCAEIMSEGSLIP 62

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                                   +  PA+ +  ILL            G   + +   +
Sbjct: 63  DELVVDLVC-------------NRLSEPAVQKHGILL-----------DGFPRTLRQAEV 98

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164
                +  +    D  I+LD+  +I L R  +R     +  +             D  + 
Sbjct: 99  -----LRARGFKFDMMILLDVSPEILLNRCLSRRLDPVTGRIYNLKSDPPSPDVVDRLQI 153

Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +       HE+R QI+      +  +  D    +D+      V   +   + + +Q
Sbjct: 154 RSDDTKEKHERRMQIYNSQKATLIAHYSDIIIEIDADPEINVVFKELQKKINKRLQ 209


>gi|157876730|ref|XP_001686708.1| adenylate kinase [Leishmania major strain Friedlin]
 gi|68129783|emb|CAJ09089.1| putative adenylate kinase [Leishmania major strain Friedlin]
          Length = 220

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 77/234 (32%), Gaps = 52/234 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI   G  G+GK T   LL    +   + VH+        A    R  +L       G 
Sbjct: 3   LFIILFGPPGSGKGTVSHLLV---KEYGF-VHL-------SAGNLLREEVLKKS--PLGR 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILL---CDRFLDSSYAYQGERDSSQHLF--LDS 119
               I+               +L+  ++++   C+R   S  A Q            L  
Sbjct: 50  RCAEIMS------------EGSLIPDELVVDLVCNR--LSEQAVQKHGILLDGFPRNLRQ 95

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERKD 166
            + ++ +    D  I LD+  +I L R  +R     +  +             D  + + 
Sbjct: 96  AEVLTARGFKFDMMIFLDVSPEILLDRCLSRRLDPVTGRIYNLKSDPPSPEVADRLQIRS 155

Query: 167 VMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                 HE+R QI+      +  +  D    +++    + V   +   + + +Q
Sbjct: 156 DDTKEKHERRMQIYNSQKATLIAHYSDIIIEINADPEIKVVFKELQKKINKRLQ 209


>gi|224067399|ref|XP_002302480.1| predicted protein [Populus trichocarpa]
 gi|118488191|gb|ABK95915.1| unknown [Populus trichocarpa]
 gi|222844206|gb|EEE81753.1| predicted protein [Populus trichocarpa]
          Length = 199

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 63/213 (29%), Gaps = 57/213 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        Y            A +  R  + S   +          
Sbjct: 18  GGPGSGKGTQCANVVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 58  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 101

Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +    + P   +  + P +   KR+ +R   RE   ++   ++  +  E      
Sbjct: 102 NRAAFEAVTKIEPAFVLFFNCPEEEMEKRILSRNQGREDDNIETIRKRFNVFLESSLPVV 161

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
           + +     +   +   VD+A S + V   +  I
Sbjct: 162 EYY-----DSKGKVRKVDAAKSVEEVFEAVKAI 189


>gi|126439290|ref|YP_001060284.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           668]
 gi|126455460|ref|YP_001067543.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1106a]
 gi|134280177|ref|ZP_01766888.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           305]
 gi|217420618|ref|ZP_03452123.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           576]
 gi|237813674|ref|YP_002898125.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           MSHR346]
 gi|242314321|ref|ZP_04813337.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1106b]
 gi|254180765|ref|ZP_04887363.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1655]
 gi|254259178|ref|ZP_04950232.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1710a]
 gi|126218783|gb|ABN82289.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           668]
 gi|126229102|gb|ABN92642.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1106a]
 gi|134248184|gb|EBA48267.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           305]
 gi|184211304|gb|EDU08347.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1655]
 gi|217396030|gb|EEC36047.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           576]
 gi|237503888|gb|ACQ96206.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           MSHR346]
 gi|242137560|gb|EES23962.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1106b]
 gi|254217867|gb|EET07251.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1710a]
          Length = 229

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 20  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 72

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +     I  A      ++ D F+   +  +A     D    L+     
Sbjct: 73  Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 128 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 168


>gi|149369725|ref|ZP_01889577.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [unidentified
           eubacterium SCB49]
 gi|149357152|gb|EDM45707.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [unidentified
           eubacterium SCB49]
          Length = 354

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 27/214 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+   LL      K      +  P      E             F  E
Sbjct: 160 YIAIEGNIGAGKTSLSHLLSADFNAKLILERFSDNPFLPKFYE-------DQSRYAFPLE 212

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                F A R   +   I+   +  + ++ D   D+  +      + Q    +  +++  
Sbjct: 213 MS---FLADRYQQLLEDIKQFDLFKERVIAD--YDAYKSLIFANITLQDEEFNLYKKLFS 267

Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
               +   PD  + L    D  L+ ++ R    E +              K  + +L+  
Sbjct: 268 LMYKELPKPDVYVYLYQNTDRLLENIKKRGRKYEKSI-------KADYLTKINEGYLEFI 320

Query: 182 R-NQPDRCHIVDSAHSFQSVA--TNILNIVWELV 212
           +  Q +   I+D +     V    + L IV +++
Sbjct: 321 KNQQANNVKIIDIS-EMDFVKHRADYLKIVRQIL 353


>gi|168065809|ref|XP_001784839.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663593|gb|EDQ50349.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 191

 Score = 52.3 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 67/209 (32%), Gaps = 37/209 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  G+GK T  + +      ++    ++    +       +  + ++ + G         
Sbjct: 1   GGPGSGKGTQCNKIVEHFGFEHLSAGELLRAEQNSDGEIGKMIKGLI-NEGKLVPSEMTV 59

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            ++  A                 KIL+ D F          R+       D +       
Sbjct: 60  KLILNA----------MSKCSNNKILI-DGF---------PRNDENREVWDRVA-----G 94

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQ 184
           + P+  I +    ++   R+ +R   R+   L+   ++  + +E+     + +  IA   
Sbjct: 95  LKPEFIIFITSSEEVMQNRLLSRNEGRDDDNLETIRKRFKLFNEQTLPVIKHYESIAA-- 152

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                 ++   S + V   I  +   ++Q
Sbjct: 153 ---VQKINGMQSVEDVFAEIRPLFNPILQ 178


>gi|66816361|ref|XP_642190.1| deoxyadenosine kinase [Dictyostelium discoideum AX4]
 gi|74856744|sp|Q54YL2|DAK_DICDI RecName: Full=Deoxyadenosine kinase; AltName: Full=DddDAK;
           Short=DAK
 gi|37780191|gb|AAO64433.1| deoxyadenosine kinase [Dictyostelium discoideum]
 gi|60470288|gb|EAL68268.1| deoxyadenosine kinase [Dictyostelium discoideum AX4]
          Length = 245

 Score = 52.0 bits (124), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 40/198 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63
           I+  G+ GAGKTT    L + L               T   E   ++ L        ++G
Sbjct: 24  IAISGLIGAGKTTLAVALGKVLNL------------PTYFEEVIDNLYLQDFYKDPKKYG 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHL------ 115
            + +  +  +      +         G   + DR  + DS +A                 
Sbjct: 72  FQLQIYLLNSRFQ---QQQQIIWQARGG--VQDRTIYEDSVFAKMLNESGLLDDRDYNTY 126

Query: 116 --FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
                +L         PD  I LD+  +  L+R++ R    E           +   +  
Sbjct: 127 CKLFQNLSNFMR---RPDLIIHLDVSPEKSLERIKLRNRDCEKDV-------SLEYLQNL 176

Query: 174 RQIFLDIARNQPDRCHIV 191
              + +  ++      ++
Sbjct: 177 YNAYHEFLQDISRYIPVI 194


>gi|78101495|pdb|2AXP|A Chain A, X-Ray Crystal Structure Of Protein Bsu20280 From Bacillus
           Subtilis. Northeast Structural Genomics Consortium
           Target Sr256.
 gi|78101496|pdb|2AXP|B Chain B, X-Ray Crystal Structure Of Protein Bsu20280 From Bacillus
           Subtilis. Northeast Structural Genomics Consortium
           Target Sr256.
 gi|262118822|pdb|3KB2|A Chain A, Crystal Structure Of Yorr Protein In Complex With
           Phosphorylated Gdp From Bacillus Subtilis, Northeast
           Structural Genomics Consortium Target Sr256
 gi|262118823|pdb|3KB2|B Chain B, Crystal Structure Of Yorr Protein In Complex With
           Phosphorylated Gdp From Bacillus Subtilis, Northeast
           Structural Genomics Consortium Target Sr256
          Length = 173

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 43/205 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG +   K+T  + L + L+               P  + +   L   G ++    
Sbjct: 3   LIILEGPDCCFKSTVAAKLSKELK--------------YPIIKGSSFELAKSGNEKL--- 45

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                      +H        L +   ++ DRF+ S+  Y  +      L    L+ I  
Sbjct: 46  ----------FEHFNK-----LADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIED 90

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           +       + L     +  KR++ R         +Y E KD+       +++ ++  N  
Sbjct: 91  KIKAKAKVVYLHADPSVIKKRLRVRGD-------EYIEGKDID---SILELYREVXSNAG 140

Query: 186 DRCHIVDSAH-SFQSVATNILNIVW 209
              +  D+   S   +A +I+ +V 
Sbjct: 141 LHTYSWDTGQWSSDEIAKDIIFLVE 165


>gi|301768282|ref|XP_002919554.1| PREDICTED: deoxycytidine kinase-like [Ailuropoda melanoleuca]
          Length = 260

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 87/240 (36%), Gaps = 40/240 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGT--PAAEA 49
           I+ EG   +GKTT +++LK+  +   ++V                   E   +       
Sbjct: 24  IAIEGNIASGKTTFVNILKQVCED--WEVVPEPVARWCNVQNAQGDCEELTTSQESGGNV 81

Query: 50  ARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSY 103
            + +        F  ++ A + +  R         +++  +P L   + +  DR++ +S 
Sbjct: 82  LQMMYEKPERWSFTFQSYACL-SRIRAQLACLDGKLKDAEKPVLFFERSIYSDRYVFASN 140

Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157
            Y+ E  +     +     D + +   Q ++ D  I L    +  L R+  R    E   
Sbjct: 141 LYESECMNETEWTIYQDWHDWMNQQFGQSLVLDGIIYLRATPEKCLNRIYLRGRNEEQGI 200

Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            L+Y E+     +  ++H   +  F D  +  P     +D    F+     ++  V E +
Sbjct: 201 PLEYLEKLHYKHESWLLHRTLKTNF-DFLQEIP--ILTLDINEDFKDKHDGLIEKVKEFL 257


>gi|224825652|ref|ZP_03698756.1| deoxynucleoside kinase [Lutiella nitroferrum 2002]
 gi|224601876|gb|EEG08055.1| deoxynucleoside kinase [Lutiella nitroferrum 2002]
          Length = 211

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 26/182 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59
           M+   ++  EG  GAGK+     L  +         +  EP   P      R+       
Sbjct: 1   MSQLRYVVVEGPIGAGKSALARRLADYW---GVS-LLAEEPAANPFLGRFYRNPQQHGLA 56

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLF 116
            +         F   R D    +    L    ++  D FL   D+ +A     D  +H  
Sbjct: 57  TQLS-------FLLQRADLAAEMQDGPLRTAPLV-SD-FLFEKDALFAR-VNLDEPEHAL 106

Query: 117 LDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
              L + +     +PD  I L    D+ L RV +R    ESA  +          ++   
Sbjct: 107 YQRLTDRLLPAFPVPDLVIYLQASEDVLLSRVASRAKETESAFPE-------GYLKRVHA 159

Query: 176 IF 177
            +
Sbjct: 160 AY 161


>gi|317493497|ref|ZP_07951918.1| hypothetical protein HMPREF0864_02683 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918440|gb|EFV39778.1| hypothetical protein HMPREF0864_02683 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 235

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 60/244 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTP--------AAEAARHVLLS 56
           I+  G +G+GK+T    L   +Q+    V  H+ ++ G             +A    +  
Sbjct: 9   IAVIGSDGSGKSTVCEHLINCVQKYGPAVRIHLGKQAGNVERAVVKLPLMGKALNKTIKH 68

Query: 57  CGVDEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE- 108
             V           A  I+    R       +      G I+L DR+       AY G  
Sbjct: 69  NKVKSAKKLPGPVPALVIMSFVFRRLLRFRRMLACHRRGLIVLADRYPQIQIPGAYDGTV 128

Query: 109 --RDSSQHLFLDSLQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
              + +   F+  L  +            PD  I L++ +D+   R             D
Sbjct: 129 FPANVTGSRFVLWLAGLERSSFSWMANHKPDLVIKLNVDLDVACAR-----------KPD 177

Query: 161 YFERKDVMIHEKRRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWEL 211
                    H +       +A+             +   +D+      V  +    +   
Sbjct: 178 ---------HRR-----EALAKKIAITPQLTFDGSQLVDIDANKPLDEVLIDAEKAITSF 223

Query: 212 VQKR 215
           ++ R
Sbjct: 224 MEAR 227


>gi|206973775|ref|ZP_03234693.1| hypothetical protein BCH308197_2535 [Bacillus cereus H3081.97]
 gi|222096093|ref|YP_002530150.1| hypothetical protein BCQ_2433 [Bacillus cereus Q1]
 gi|206747931|gb|EDZ59320.1| hypothetical protein BCH308197_2535 [Bacillus cereus H3081.97]
 gi|221240151|gb|ACM12861.1| possible uridine kinase [Bacillus cereus Q1]
          Length = 187

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 72/222 (32%), Gaps = 55/222 (24%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           MN     I+   I G GKTT    L   L   +   +D +   E   T   +        
Sbjct: 2   MNKKTKIITIAAISGGGKTTVTERLTEKLTNSKALYFDSYH-FENCPTDICKWI------ 54

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              +        +      + H+   IR + +E  I+      D  +AY           
Sbjct: 55  --NEGANYNEWVLTPLIKDIQHL---IRDSNVEYIIV------DYPFAY----------- 92

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R   R         D+ E     IH      
Sbjct: 93  ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDAMSEIHNDLKHY 138

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
               R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 139 ITYARKAYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180


>gi|195996877|ref|XP_002108307.1| hypothetical protein TRIADDRAFT_63579 [Trichoplax adhaerens]
 gi|190589083|gb|EDV29105.1| hypothetical protein TRIADDRAFT_63579 [Trichoplax adhaerens]
          Length = 237

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 51/159 (32%), Gaps = 21/159 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FIS  GI  +GKT+    L + L      V    EP         R    +     F  +
Sbjct: 38  FISVAGITASGKTSVTKALSKSL-----CVPSFHEP--VLDNNYLRDFYRNPRRHGFAVQ 90

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS----- 119
              +        H +   +  + +G+  + DR +     Y    +D+      +      
Sbjct: 91  VNLL------NAHFQQQ-QQIVWQGRGGIQDRSIYEDLVYAKVLKDTGLMEEREYNTYTS 143

Query: 120 -LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +S     P+  + LD+  +    R+  R    ES 
Sbjct: 144 LFNNLSNFLKRPNLIVYLDVTPEECKARIDKRGCKGESG 182


>gi|317493499|ref|ZP_07951920.1| hypothetical protein HMPREF0864_02685 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918442|gb|EFV39780.1| hypothetical protein HMPREF0864_02685 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 247

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLL-------- 55
            I+  G +G GK+T  + L + L++  + V   R  G       +  + + L        
Sbjct: 17  LIAVVGCDGTGKSTLTADLVKQLKK--HWVTERRYLGLVSGEDGDKIKRLPLVGVWLERR 74

Query: 56  ----SCGVDEFGAEAEAIV-------FAAARLDHVENVIRPALMEGKILLCDRF---LDS 101
               S        ++ A+        F+  R  ++   I  A   G +++ DR+     S
Sbjct: 75  LATKSSKTQSMSTKSPALWAALIMFGFSLRRRANLRKAICLA-QSGVLVISDRYPQADVS 133

Query: 102 SYAYQGERDSSQH---------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + Y G     +             + L    +  + P+  I LD+ +D    R
Sbjct: 134 GFHYDGPGIGVERVEEGVKRHLAERERLLYQQMALLRPELIIRLDIDIDTAFSR 187


>gi|313891228|ref|ZP_07824847.1| deoxyguanosine kinase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120591|gb|EFR43711.1| deoxyguanosine kinase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 213

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 51/234 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L  +L     DV         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLATALGDYL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-----------SSYAYQGERDSSQ 113
           +  A +     L+     I+ A      +L DR +            +    + E D  Q
Sbjct: 47  KKYAFLLQIFFLNKRFKSIKEAYKADNNVL-DRSIFEDELFLKLNYKNGNVTKAELDIYQ 105

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167
            L  + L+E+  + +  PD  I +D+  +  L+R+  R           FE+ D      
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFEKMLERIAKRGRS--------FEQVDDNPGLE 157

Query: 168 MIHEKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
             + +  + +          P     +D        + + ++  +L ++ + ++
Sbjct: 158 EYYYQVHEEYPTWYEEYEVSPK--MRIDGDALDFVQNPEDLSK-VLQMIDDKLK 208


>gi|53720432|ref|YP_109418.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei K96243]
 gi|167721067|ref|ZP_02404303.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei DM98]
 gi|167740038|ref|ZP_02412812.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei 14]
 gi|167817257|ref|ZP_02448937.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei 91]
 gi|167847155|ref|ZP_02472663.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei B7210]
 gi|167895737|ref|ZP_02483139.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei 7894]
 gi|167904128|ref|ZP_02491333.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912388|ref|ZP_02499479.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei 112]
 gi|167920342|ref|ZP_02507433.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei BCC215]
 gi|254191600|ref|ZP_04898103.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254194847|ref|ZP_04901277.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           S13]
 gi|254299146|ref|ZP_04966596.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           406e]
 gi|52210846|emb|CAH36833.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           pseudomallei K96243]
 gi|157808829|gb|EDO85999.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           406e]
 gi|157939271|gb|EDO94941.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169651596|gb|EDS84289.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           S13]
          Length = 227

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 18  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +     I  A      ++ D F+   +  +A     D    L+     
Sbjct: 71  Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 166


>gi|77408452|ref|ZP_00785191.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           COH1]
 gi|77172975|gb|EAO76105.1| deoxynucleoside kinase family protein [Streptococcus agalactiae
           COH1]
          Length = 213

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 45/232 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L + L     DV                  +L     +   
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-----------SSYAYQGERDS 111
            A  +   F   R       I+ A      +L DR +            +    + E D 
Sbjct: 49  YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNFKNGNVTKTELDI 103

Query: 112 SQHLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            + L  + L+E+  + +  PD  + +D+  D  L+R+  R    E    +    +    +
Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160

Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214
           ++    + +   N    P     +D        + + +  ++L+ +   +QK
Sbjct: 161 KQVHSEYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209


>gi|289579955|ref|YP_003478421.1| adenylate kinase [Natrialba magadii ATCC 43099]
 gi|289529508|gb|ADD03859.1| adenylate kinase [Natrialba magadii ATCC 43099]
          Length = 211

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 48/229 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + +       + +   T         +A R       + +   E 
Sbjct: 6   ILILGAPGAGKGTQSANISDEF---DVEHVTT--------GDALRSN-KQMDISDMDTEY 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +       + + V + +  A+++  +   D F+   Y     R+  Q   L+ + ++   
Sbjct: 54  DTPGEYMDQGELVPDEVVNAIVDEALSQADGFVLDGY----PRNLEQAEELEDMTDL--- 106

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHEK 172
               D  + LD+  +  + R+  R    E+  +              D  E+++    E 
Sbjct: 107 ----DVVLYLDVSEEELVHRLTGRRMDPETGEIYHVEYNPPEDPEVEDRLEQREDDTEET 162

Query: 173 RRQIFLDIARNQPDRCH----------IVDSAHSFQSVATNILNIVWEL 211
            R+  L + R   +              VD   +   V  ++   + + 
Sbjct: 163 VRER-LRVYRENTEPVVEYYDDQGTLERVDGEQAPDDVWESVKETIEDA 210


>gi|257089891|ref|ZP_05584252.1| predicted protein [Enterococcus faecalis CH188]
 gi|312903314|ref|ZP_07762494.1| shikimate kinase [Enterococcus faecalis TX0635]
 gi|256998703|gb|EEU85223.1| predicted protein [Enterococcus faecalis CH188]
 gi|310633190|gb|EFQ16473.1| shikimate kinase [Enterococcus faecalis TX0635]
 gi|315147271|gb|EFT91287.1| shikimate kinase [Enterococcus faecalis TX4244]
 gi|315577700|gb|EFU89891.1| shikimate kinase [Enterococcus faecalis TX0630]
          Length = 168

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDKALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR++     +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIIHEILQQLKE 168


>gi|224136530|ref|XP_002326883.1| predicted protein [Populus trichocarpa]
 gi|222835198|gb|EEE73633.1| predicted protein [Populus trichocarpa]
          Length = 199

 Score = 52.0 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 57/213 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        Y            A +  R  + S   +          
Sbjct: 18  GGPGSGKGTQCANIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 58  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQDSGNDKFLIDGFPRNEE 101

Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +    + P   +  D P +   +R+ +R   RE   ++   ++  +  E      
Sbjct: 102 NRAAFEAVTKIEPAFVLFFDCPEEEMERRILSRNQGREDDNIETIRKRFKVFLESSLPVV 161

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
           + +     +   +   VD+A     V   +  I
Sbjct: 162 EYY-----DSKGKVQKVDAAKPIDEVFEVVKAI 189


>gi|297180383|gb|ADI16600.1| deoxynucleoside kinases [uncultured gamma proteobacterium
           HF0010_01E20]
          Length = 247

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 63/193 (32%), Gaps = 23/193 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G GKTT    L   L        VT  P                       +
Sbjct: 39  YLAIEGPIGVGKTTLAKKLADLLNYPLLLEPVTENPF-------LDRFYAEGTNQALPTQ 91

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
              + F   R   V+++    L++  ++  D F+   D  +A      +   L+      
Sbjct: 92  ---LFFLLQRAKQVQDMPGNDLLDRTLV-TD-FMFEKDDIFATLTLDPAELDLYRQIHNS 146

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181
           + +    PD  I L  P  I  +RV  R    E +  +DY E             F    
Sbjct: 147 LELAPPRPDLVIYLQAPARILRQRVFRRGIDFEQSIHIDYLEALADSY-----AGFFHYY 201

Query: 182 RNQPDRCHIVDSA 194
            + P    IV++A
Sbjct: 202 DDAP--VLIVNAA 212


>gi|240103695|ref|YP_002960004.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54)
           (FtsY/SRP54) [Thermococcus gammatolerans EJ3]
 gi|239911249|gb|ACS34140.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54)
           (FtsY/SRP54) [Thermococcus gammatolerans EJ3]
          Length = 328

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GKTT I+ L  +L++    V +      T  A A   V         G + 
Sbjct: 133 IVFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 188

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R+      +D +++I  
Sbjct: 189 IKHSYGADPAAVAYDAIQHAKARGIDVVLVD---------TAGRNELNRNLMDEMKKIV- 238

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 239 RVTKPDLVIF 248


>gi|320162575|ref|YP_004175800.1| putative deoxynucleoside kinase [Anaerolinea thermophila UNI-1]
 gi|319996429|dbj|BAJ65200.1| putative deoxynucleoside kinase [Anaerolinea thermophila UNI-1]
          Length = 216

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 18/173 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++ EG+ G GKTT   +L+   Q           P  +   E             +  
Sbjct: 1   MYLAIEGVIGVGKTTLARMLQPAFQANLLLEVFEENPFLSKFYE---------DRARYAF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           + +   F  +R       I      G+ L+ D +    D+ +A          ++    +
Sbjct: 52  QTQIF-FLLSRYHQQRRGIPELTAGGRNLISD-YTFEKDALFARINLEGDELEMYYRVHE 109

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSL----RESACLDYFERKDVMIH 170
            ++ +   PD  + L    D+ ++R+  R  +     E A +D          
Sbjct: 110 ALAEKIQPPDLIVYLRATTDLLMERITRRDRVYERNMERAYIDELNHAYDEFF 162


>gi|30690246|ref|NP_850868.1| PYR6; cytidylate kinase/ uridylate kinase [Arabidopsis thaliana]
 gi|79328724|ref|NP_001031942.1| PYR6; cytidylate kinase/ uridylate kinase [Arabidopsis thaliana]
 gi|2497486|sp|O04905|UMPK_ARATH RecName: Full=Uridylate kinase; Short=UK; AltName: Full=UMP/CMP
           kinase; AltName: Full=Uridine monophosphate kinase;
           Short=UMP kinase
 gi|2121275|gb|AAB71135.1| UMP/CMP kinase [Arabidopsis thaliana]
 gi|332006176|gb|AED93559.1| Uridylate kinase [Arabidopsis thaliana]
 gi|332006177|gb|AED93560.1| Uridylate kinase [Arabidopsis thaliana]
          Length = 202

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 57/220 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +                     A +  R  + S   +          
Sbjct: 21  GGPGSGKGTQCAYIVEH-----------YGYTHLSAGDLLRAEIKSGSENG--------- 60

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 61  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAIQENGNDKFLIDGFPRNEE 104

Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +   E+ P   +  D P +   KR+  R   RE   ++   ++  +  E      
Sbjct: 105 NRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVI 164

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +         +   +++A   ++V   +  I     +K
Sbjct: 165 HYY-----EAKGKVRKINAAKPIEAVFEEVKAIFSPEAEK 199


>gi|12835871|dbj|BAB23396.1| unnamed protein product [Mus musculus]
          Length = 395

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 196 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 248

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 249 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 301

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 302 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 353

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 354 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 391


>gi|76811432|ref|YP_334687.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1710b]
 gi|76580885|gb|ABA50360.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei
           1710b]
          Length = 241

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 32  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 84

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +     I  A      ++ D F+   +  +A     D    L+     
Sbjct: 85  Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 139

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 140 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 180


>gi|294660490|ref|NP_853273.2| deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)]
 gi|284812152|gb|AAP56841.2| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)]
 gi|284930759|gb|ADC30698.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(high)]
 gi|284931336|gb|ADC31274.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. F]
          Length = 208

 Score = 52.0 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 73/215 (33%), Gaps = 24/215 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++  G+  +GK+T  + L    +       +                L +        
Sbjct: 1   MLVAISGMVASGKSTLSNNLHLHYKNSK---ILYEYDEKDEVFNQFLEWLYNKNAVVD-- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQE- 122
                 F +  + +    ++ AL +    +  DRF    + +   + S +     +  E 
Sbjct: 56  ----FAFQSYVVQNYSRHLKQALSQNYDYIFSDRFNLEHFIFAKNKISKKPKKFINAYEA 111

Query: 123 ----ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
               +  ++ +PD  I LD   D   KR+  R  + E++  +     ++        I+ 
Sbjct: 112 MFDVLVSEDKIPDLVIYLDFNFDEFKKRIFKRNRIVETSTFN----DNIDYWRNLHSIYK 167

Query: 179 D--IARNQPDRCHIV--DS-AHSFQSVATNILNIV 208
              I + Q  +  +V  D+   + + +    + I+
Sbjct: 168 KEFINQQQKYKFKVVYLDTNNKNEEDIFKQSVEII 202


>gi|322503494|emb|CBZ38579.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 220

 Score = 51.6 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 71/236 (30%), Gaps = 56/236 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKR-----FLQRKN--YDVHVTREPGGTPAAEAARHVLLSC 57
           LFI   G  G+GK T   LL +      L   N   +  + + P G   AE      L  
Sbjct: 3   LFIILFGPPGSGKGTVSHLLVKEYGFVHLSAGNLLREEVLKKSPLGLRCAEIMSEGSLIP 62

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                                   +  PA  +  ILL            G   + +   +
Sbjct: 63  DELVVDLVC-------------NRLSEPAAQKHGILL-----------DGFPRTLRQAEV 98

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164
                +  +    D  I+LD+  +I L R  +R     +  +             D  + 
Sbjct: 99  -----LRARGFKFDMMILLDVSPEILLNRCLSRRLDPVTGRIYNLKSDPPSPDVVDRLQI 153

Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +       HE+R QI+      +  +  D    +D+      V   +   + + +Q
Sbjct: 154 RSDDTKEKHERRMQIYNSQKATLIAHYSDIIIEIDADPEINVVFKELQKKINKRLQ 209


>gi|149701603|ref|XP_001489275.1| PREDICTED: similar to Deoxycytidine kinase [Equus caballus]
          Length = 263

 Score = 51.6 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 88/240 (36%), Gaps = 38/240 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           +S EG   AGK+T +++LK+  +   ++V    VTR        +    +         +
Sbjct: 24  VSIEGNIAAGKSTFVNILKQVCED--WEVVPEPVTRWCNVQSTQDEFEELTTVEKTGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLD------HVENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         ++N  +P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQLYACLSRIRAQFASLNGKLKNAEKPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ +  +     +     D + +   Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNKQMGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQDIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E + 
Sbjct: 202 LEYLEKLHSKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYDSLVEKVKEFLN 258


>gi|11499644|ref|NP_070886.1| signal recognition particle receptor (dpa) [Archaeoglobus fulgidus
           DSM 4304]
 gi|2648469|gb|AAB89189.1| signal recognition particle receptor (dpa) [Archaeoglobus fulgidus
           DSM 4304]
          Length = 340

 Score = 51.6 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G+ G GKTT I+ +   L ++ Y V +    G T  A A     L       G + 
Sbjct: 148 IAFVGVNGTGKTTTIAKVANRLIKQGYSVVLAA--GDTFRAGAIEQ--LEEHAKRLGVKL 203

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 +     + + I+ A  +G  ++L D            R  ++   LD L++I  
Sbjct: 204 IKHKHGSDPAAVIYDAIKHAESKGIDVVLAD---------TAGRMHTKKNLLDQLEKI-K 253

Query: 126 QEVMPDCTIILD 137
           +   PD  I +D
Sbjct: 254 RVTKPDLIIFVD 265


>gi|225716652|gb|ACO14172.1| Deoxycytidine kinase [Esox lucius]
          Length = 264

 Score = 51.6 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 41/242 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T + LL+   Q K+++V    + R             +         +
Sbjct: 25  ISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNVQTENSDFEELTTSQKSGGNV 82

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRFLDSSYA 104
           L    ++    A      A     R        +    +  +      +  DR++ ++  
Sbjct: 83  LQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREADNPVQFFERSVYSDRYIFAANL 142

Query: 105 YQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +       L     + +  D  I L +  +  ++R++ R    E    
Sbjct: 143 YESECLNETEWSIYQDWHGWLHRQFGKHIQLDGIIYLRVAPETCMERLRLRGREEEQGIP 202

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS--FQSVA-TNILNIVWE 210
           L+Y E+     +  + H+  R  +  +          +D         V   +++  V E
Sbjct: 203 LEYLEKLHFKHESWLQHKTMRMEYQYL---NDVPILTLDVNEDFKVDKVKCADMIEKVKE 259

Query: 211 LV 212
            +
Sbjct: 260 FL 261


>gi|224534368|ref|ZP_03674946.1| deoxyguanosine/deoxyadenosine kinase [Borrelia spielmanii A14S]
 gi|224514470|gb|EEF84786.1| deoxyguanosine/deoxyadenosine kinase [Borrelia spielmanii A14S]
          Length = 200

 Score = 51.6 bits (123), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L + L+     V    E                     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   + LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|315169029|gb|EFU13046.1| shikimate kinase [Enterococcus faecalis TX1341]
          Length = 168

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR++     +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIINEILQQLKE 168


>gi|307171079|gb|EFN63122.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial [Camponotus floridanus]
          Length = 421

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKR---------------FLQRKNYDVHVTREPGGTPAAEAAR 51
           I  EG   AGK+   + L                 ++    YDV    +           
Sbjct: 79  IVVEGPIAAGKSKLAARLAEEFDMVYLPPPTFDEYYINEYGYDVRTLDDRLSLSTQSCDV 138

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
              L+          +   F   + D     +   L  G+ ++  R   S Y +     +
Sbjct: 139 QKFLTNPEHPNVPMFQFHYFQL-KFDQYITALLHLLSTGQGVVLSRSFYSDYIFAKAMTN 197

Query: 112 SQHLFLDSLQ------EIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           + ++  ++L        I+ +  + P   + LD+PVD+  ++++ R    E   
Sbjct: 198 AGYMRQEALNFYIDIVRIAKLMMLRPHLIVYLDIPVDVVKEKIKKRGIPYEINS 251


>gi|228904794|ref|ZP_04068848.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222]
 gi|228854808|gb|EEM99412.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222]
          Length = 215

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 77/225 (34%), Gaps = 41/225 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            +G+ GAGKTT   L+               E  G P AE   +   +       A    
Sbjct: 2   VDGVVGAGKTTLAQLISERFN------IPIFEELGNPDAERLLNRFYAKKTRW--AFTTQ 53

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQGERDSSQHLFLDS--- 119
           I FA  R +    +I+    EG  +L DR +       S  A   E       + +    
Sbjct: 54  IFFANERWE----MIKKVHEEGHGIL-DRSIFGDNIFASMLAEDLEDGGEGMTWEEYRTY 108

Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              L +I      P+  I L    ++  +R+ NR    ES         ++   E+    
Sbjct: 109 KKLLDQILEHSQPPELLIYLQCSAEVAKQRIDNRGRGIESEV-------EMAYWERLNDK 161

Query: 177 FLDIARNQPD--RCHI-VD----SAHSFQSVATNILNIVWELVQK 214
           +    ++     +  I VD    + +       ++L +V E ++K
Sbjct: 162 YDVWYQDYDHSPKILINVDNLDFANNEEDK--ESVLALVGEALEK 204


>gi|289578515|ref|YP_003477142.1| guanylate kinase [Thermoanaerobacter italicus Ab9]
 gi|297544790|ref|YP_003677092.1| guanylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|289528228|gb|ADD02580.1| guanylate kinase [Thermoanaerobacter italicus Ab9]
 gi|296842565|gb|ADH61081.1| guanylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 207

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 39/213 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G  GAGK T    L    +     +  T  P  +   E   +   +    E
Sbjct: 6   KKGLLIVLSGPSGAGKGTICKALMEKEKDLKLSISATTRPPRSGEIEGKNYFFKTEEEFE 65

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              E ++ +  A   DH     ++ +   L EG  ++                    L +
Sbjct: 66  KMIENDSFLEWAKVYDHYYGTPKDFVLKNLDEGNDVV--------------------LEI 105

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           D    + ++E  P+   I  LP   +    R++ R +  E   +  F+            
Sbjct: 106 DIQGALKIKEKFPEGIFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS----------- 154

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            + ++         +++   S +     I  I+
Sbjct: 155 AYEELNYVSRYNYVVIN--DSIEEAVEKIRAII 185


>gi|167837747|ref|ZP_02464630.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia
           thailandensis MSMB43]
          Length = 227

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 18  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +     I  A      ++ D F+   +  +A     D    L+     
Sbjct: 71  Q----LAFALQRERQAREIAAACEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 126 HLDAPTPAPDLVVYLQASPEVLFSRIQKRGEAMELQIGDAY 166


>gi|75758373|ref|ZP_00738496.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74494099|gb|EAO57192.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 219

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 77/225 (34%), Gaps = 41/225 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            +G+ GAGKTT   L+               E  G P AE   +   +       A    
Sbjct: 6   VDGVVGAGKTTLAQLISERFN------IPIFEELGNPDAERLLNRFYAKKTRW--AFTTQ 57

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQGERDSSQHLFLDS--- 119
           I FA  R +    +I+    EG  +L DR +       S  A   E       + +    
Sbjct: 58  IFFANERWE----MIKKVHEEGHGIL-DRSIFGDNIFASMLAEDLEDGGEGMTWEEYRTY 112

Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              L +I      P+  I L    ++  +R+ NR    ES         ++   E+    
Sbjct: 113 KKLLDQILEHSQPPELLIYLQCSAEVAKQRIDNRGRGIESEV-------EMAYWERLNDK 165

Query: 177 FLDIARNQPD--RCHI-VD----SAHSFQSVATNILNIVWELVQK 214
           +    ++     +  I VD    + +       ++L +V E ++K
Sbjct: 166 YDVWYQDYDHSPKILINVDNLDFANNEEDK--ESVLALVGEALEK 208


>gi|238809904|dbj|BAH69694.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 227

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 12/213 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63
           + I   G+ G+GK+T    L +  ++    V +       P        +     +   G
Sbjct: 5   MIIGISGMIGSGKSTLAKGLHKHYKK---SVLLEEFQENDPVFNTFLKWMYEKQPNIHIG 61

Query: 64  AEAEAIVFAAARL-DHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDSSQHLFL 117
            ++  I   +      V       L      +  DRF    Y +      ++D       
Sbjct: 62  FQSYIIESLSDTFKKTVAKFKNNNLNFRDNHIFLDRFNIEHYVFAVVTLMDKDPKYQAGF 121

Query: 118 DSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           D++ ++I   E  PD  I +D+  +    R+  R    E       E    ++H   +++
Sbjct: 122 DAMFEKIVDPEDNPDLAIFIDIDFNAFKARLLARGRASEVDNYAQNETYFKLLHSLYKKL 181

Query: 177 FLDIARNQPDRCHIVDS-AHSFQSVATNILNIV 208
           ++ +         I++S   S + V    +NI+
Sbjct: 182 YIRLVEKFKIPYVIINSNNKSEKEVLQEAINII 214


>gi|85691121|ref|XP_965960.1| guanylate kinase [Encephalitozoon cuniculi GB-M1]
 gi|19068527|emb|CAD24995.1| GUANYLATE KINASE [Encephalitozoon cuniculi GB-M1]
          Length = 217

 Score = 51.6 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 34/210 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ +   G  G+GK+T IS +      +    H TR P            + +   +
Sbjct: 34  MIDGVHLVLTGPSGSGKSTIISHVLSKFPFEFSVSHTTRAPRNGEVNGKDYFFVTTEEFE 93

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E + +     ++            K ++ D        Y G             
Sbjct: 94  SMVERQELLEYIQYNGNYYGTAAAQLRNPSKTVILD------LEYDGV------------ 135

Query: 121 QEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             +  ++  P+   I +    +I  +R++ R             +K++    +  + F  
Sbjct: 136 --LYCRKNCPNFVIIYIYCDKNIAYERLKKRMGSEN--------KKELEGRMRLYEKFDS 185

Query: 180 IARNQPDRC-HIVDSAHSFQSVATNILNIV 208
           I     DRC +++D++HS +     +  I+
Sbjct: 186 I----KDRCDYVIDNSHSLEKSKREVEEII 211


>gi|225552141|ref|ZP_03773081.1| deoxyguanosine/deoxyadenosine kinase [Borrelia sp. SV1]
 gi|226320807|ref|ZP_03796361.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 29805]
 gi|225371139|gb|EEH00569.1| deoxyguanosine/deoxyadenosine kinase [Borrelia sp. SV1]
 gi|226233782|gb|EEH32509.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 29805]
          Length = 200

 Score = 51.6 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L + L+     V    E                     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   + LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|261402958|ref|YP_003247182.1| Adenylate kinase [Methanocaldococcus vulcanius M7]
 gi|261369951|gb|ACX72700.1| Adenylate kinase [Methanocaldococcus vulcanius M7]
          Length = 176

 Score = 51.6 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 58/206 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I+  G  G GKTT   +L++ L      V            E  +   L     ++  + 
Sbjct: 3   IAITGTPGVGKTTVSKILEKKL---GVRVI--------NITEVVKKYKLYKEKDEDMDSY 51

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                      + +E  I+    +  +++ D  +                          
Sbjct: 52  VIDF-------EKLEEFIKNIETKEGVVILDGHV-------------------------S 79

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ- 184
             + PD T++L    +I  +R++ R           ++RK V+  E  +   LD+   + 
Sbjct: 80  HLLNPDYTVVLRCDPEIVKERLEKR----------KYDRKKVL--ENVQAEILDVCLCES 127

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVW 209
             + + +D+     + +   I+  + 
Sbjct: 128 KGKVYEIDTTGRDVEDIVEEIMTAIK 153


>gi|308189953|ref|YP_003922884.1| deoxyguanosine kinase [Mycoplasma fermentans JER]
 gi|319777234|ref|YP_004136885.1| deoxyguanosine kinase [Mycoplasma fermentans M64]
 gi|307624695|gb|ADN69000.1| deoxyguanosine kinase [Mycoplasma fermentans JER]
 gi|318038309|gb|ADV34508.1| Deoxyguanosine kinase [Mycoplasma fermentans M64]
          Length = 223

 Score = 51.6 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 12/213 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63
           + I   G+ G+GK+T    L +  ++    V +       P        +     +   G
Sbjct: 1   MIIGISGMIGSGKSTLAKGLHKHYKK---SVLLEEFQENDPVFNTFLKWMYEKQPNIHIG 57

Query: 64  AEAEAIVFAAARL-DHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDSSQHLFL 117
            ++  I   +      V       L      +  DRF    Y +      ++D       
Sbjct: 58  FQSYIIESLSDTFKKTVAKFKNNNLNFRDNHIFLDRFNIEHYVFAVVTLMDKDPKYQAGF 117

Query: 118 DSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           D++ ++I   E  PD  I +D+  +    R+  R    E       E    ++H   +++
Sbjct: 118 DAMFEKIVDPEDNPDLAIFIDIDFNAFKARLLARGRASEVDNYAQNETYFKLLHSLYKKL 177

Query: 177 FLDIARNQPDRCHIVDS-AHSFQSVATNILNIV 208
           ++ +         I++S   S + V    +NI+
Sbjct: 178 YIRLVEKFKIPYVIINSNNKSEKEVLQEAINII 210


>gi|291296956|ref|YP_003508354.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279]
 gi|290471915|gb|ADD29334.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279]
          Length = 206

 Score = 51.2 bits (122), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 30/165 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63
           ++I+  G  G+GK+T   LL +               G  P  E       L+    + G
Sbjct: 1   MYIAIAGNIGSGKSTLTGLLAQR-------------YGLLPVYETVDENPYLADFYADMG 47

Query: 64  AEA---EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118
             A   +    A     H+E  I PA    + ++ DR  + D+    Q  R S      D
Sbjct: 48  RWAFQSQVFFLAKRLRQHLEQ-INPA----QHVVQDRTIYEDAFIFAQNLRISGHLAERD 102

Query: 119 S-----LQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                 L E I+     PD  I +   V+     +  R    E  
Sbjct: 103 WQTYLALYEGIAPALRKPDLLIYVRASVETLQAHIARRGRAYEQR 147


>gi|315039251|ref|YP_004032819.1| Deoxyadenosine kinase [Lactobacillus amylovorus GRL 1112]
 gi|312277384|gb|ADQ60024.1| Deoxyadenosine kinase [Lactobacillus amylovorus GRL 1112]
          Length = 215

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL-----------DSSYAYQGERDSSQHL 115
              +     L+H    I  A+ E   +  DR +           DS  A   E      L
Sbjct: 53  --FLLNTYLLNHRLAQINQAIKEKNSV-SDRSIYEDALFFKMNADSKVADPTEFRIYDDL 109

Query: 116 FLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             + +++        PD  I + + +D  LKR++ R    E    D
Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLKRIKKRGRSFEQISTD 155


>gi|289579826|ref|YP_003478292.1| hypothetical protein Nmag_0133 [Natrialba magadii ATCC 43099]
 gi|289529379|gb|ADD03730.1| hypothetical protein Nmag_0133 [Natrialba magadii ATCC 43099]
          Length = 230

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 63/201 (31%), Gaps = 42/201 (20%)

Query: 8   SFE--GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--FG 63
             E  G+ G GKTT    + + L  +   VHVT            R V L        FG
Sbjct: 4   VVEFVGLPGTGKTTLSRGVAKKLTTRG--VHVTEPTYELETRSTVRRVALKSRTAAVGFG 61

Query: 64  AEAEAIVFAAARL------DHVENVIRPALM-------------EGKILLCDRFLDSSYA 104
               A + +A+R         + + IR                  G   L D+ +     
Sbjct: 62  RYPSAGL-SASRAVFNTDQQSLTDYIRVLFNLLYITGTITKRRSAGGACLLDQGV----- 115

Query: 105 YQG---ERDSSQHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           YQG       S H +   L      +Q + PD  + L++       R++ R         
Sbjct: 116 YQGIWSAGFRSHHKWAKILDRFDNILQRLSPDLIVFLEVDEATIADRLRKRSDGDT---- 171

Query: 160 DYFERKDVMIHEKRRQIFLDI 180
             FE       ++ R  +  +
Sbjct: 172 -RFEP-GTETFDRGRAGYERL 190


>gi|254172639|ref|ZP_04879314.1| signal recognition particle-docking protein FtsY [Thermococcus sp.
           AM4]
 gi|214033568|gb|EEB74395.1| signal recognition particle-docking protein FtsY [Thermococcus sp.
           AM4]
          Length = 328

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GKTT I+ L  +L++    V +      T  A A   V         G + 
Sbjct: 133 IVFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 188

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R+      +D +++I  
Sbjct: 189 IKHSYGADPAAVAYDAIQHAKARGIDVVLVD---------TAGRNELNRNLMDEMKKIV- 238

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 239 RVTKPDLVIF 248


>gi|300119333|ref|ZP_07057011.1| hypothetical protein BCSJ1_25751 [Bacillus cereus SJ1]
 gi|298723288|gb|EFI64052.1| hypothetical protein BCSJ1_25751 [Bacillus cereus SJ1]
          Length = 186

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 75/222 (33%), Gaps = 55/222 (24%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           MN+    I+   + G GKTT    L   L   +   +D +   E   T   +        
Sbjct: 1   MNNKTKIITIAAVSGGGKTTVTERLTEKLTNSKALYFDSYH-FENCPTDICKWI------ 53

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D    +   +      + H+   IR + ++  I+      D  +AY           
Sbjct: 54  --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 91

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R   R         D+ E     IH      
Sbjct: 92  ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTKSEIHNDLMHY 137

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
               R+ +L+  R  +P+   ++D A S   +   I   ++ 
Sbjct: 138 INYARKAYLEALRTVKPNSDIVLDGALSVDEIINQIEEELYR 179


>gi|226311715|ref|YP_002771609.1| deoxyguanosine kinase [Brevibacillus brevis NBRC 100599]
 gi|226094663|dbj|BAH43105.1| deoxyguanosine kinase [Brevibacillus brevis NBRC 100599]
          Length = 213

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 15/160 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S + I+ EG  G GKT+    L R    +  +  V   P      E            
Sbjct: 1   MKS-ILITVEGPIGIGKTSLSRELSRACNLQLLEEIVYENPFLGKFYENI---------A 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118
           E+  + E + F   R   ++++    L +G  ++ D   F ++ +A +  + ++   +L 
Sbjct: 51  EWSFQLE-MFFLCNRYKQLQDIHSQFLNQGISVVSDYNIFKNTIFAKRTLQGNNLPKYLK 109

Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            + +I  +++      I +   ++  +KR+  R    E +
Sbjct: 110 -IYDILTEDLPQAHLVIYMTASIETVMKRIAMRDREMERS 148


>gi|225012003|ref|ZP_03702440.1| Guanylate kinase [Flavobacteria bacterium MS024-2A]
 gi|225003558|gb|EEG41531.1| Guanylate kinase [Flavobacteria bacterium MS024-2A]
          Length = 189

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 77/223 (34%), Gaps = 45/223 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59
           MNSG  I F    G+GKTT +  L        + +  T R+P G    +   +  LS   
Sbjct: 1   MNSGKLIVFSAPSGSGKTTLVHHLLSQTLPLGFSISATSRKPRGQEE-DGVDYYFLSASE 59

Query: 60  DEFGAEAEAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
            +   E +A +       +       + +     EGK +L D                  
Sbjct: 60  FQMKIEEKAFLEYEEVYQNTFYGTYTSELERLWAEGKQVLFD------------------ 101

Query: 115 LFLDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +D +  I++++  PD    I +  P   +    R++ R +  E    +  E+  + I 
Sbjct: 102 --IDVVGGINIKKQYPDQTLAIFVK-PPSLNELEDRLRKRGTDSEEKIKERLEKAKIEI- 157

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                   + A    D C I       ++    ++ +V + + 
Sbjct: 158 --------EYATQF-DYCLI---NEDMETAKKEVVQLVSDFIN 188


>gi|239789007|dbj|BAH71153.1| ACYPI006573 [Acyrthosiphon pisum]
          Length = 176

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 19/160 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT +            +V++ +EP          + L   G+     +  +
Sbjct: 15  VEGNVGSGKTTFLEQFADC-----PNVYLAKEPVHKWQDVRGHNFL---GLMYEDPKRWS 66

Query: 69  IVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-------LDS 119
             F +   R     +  RP L    I + +R + S+     E     +L        LD+
Sbjct: 67  FAFQSIVQRTMLELHQTRPKLPGQNIKIMERSIYSARNIFVENLYKDNLMAAPEYSVLDA 126

Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                ++   +  D  I L    +I  +R++ R    E  
Sbjct: 127 WYNWLIENVQIESDLIIYLRTDPEIAYQRIKTRNRSEEKN 166


>gi|195941407|ref|ZP_03086789.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 (dck) [Borrelia
           burgdorferi 80a]
          Length = 200

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L + L+     V    E               +     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKNKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   + LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|328714167|ref|XP_001947637.2| PREDICTED: deoxynucleoside kinase-like [Acyrthosiphon pisum]
          Length = 268

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 19/160 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GKTT +            +V++ +EP          + L   G+     +  +
Sbjct: 77  VEGNVGSGKTTFLEQFADC-----PNVYLAKEPVHKWQDVRGHNFL---GLMYEDPKRWS 128

Query: 69  IVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-------LDS 119
             F +   R     +  RP L    I + +R + S+     E     +L        LD+
Sbjct: 129 FAFQSIVQRTMLELHQTRPKLPGQNIKIMERSIYSARNIFVENLYKDNLMAAPEYSVLDA 188

Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                ++   +  D  I L    +I  +R++ R    E  
Sbjct: 189 WYNWLIENVQIESDLIIYLRTDPEIAYQRIKTRNRSEEKN 228


>gi|54308798|ref|YP_129818.1| putative hymidylate kinase [Photobacterium profundum SS9]
 gi|46913228|emb|CAG20016.1| putative hymidylate kinase [Photobacterium profundum SS9]
          Length = 186

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 87  LMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEISVQEVMPDCTIILDLPVDIGL 144
           L  G  ++ DR++ S+ AYQ             D+L  I+ + ++PD  + +    +   
Sbjct: 58  LESGD-VILDRYIFSTLAYQTIMLEEDTVKKIFDALN-IAKKILLPDVIVFVKADAETIN 115

Query: 145 KRVQNRYS 152
            R++ R  
Sbjct: 116 SRIEARDG 123


>gi|315172305|gb|EFU16322.1| shikimate kinase [Enterococcus faecalis TX1346]
          Length = 168

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGLENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR++     +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIINEILQQLKE 168


>gi|307692362|ref|ZP_07634599.1| guanylate kinase [Ruminococcaceae bacterium D16]
          Length = 205

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 42/211 (19%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I   G  G GK+T I+ L       ++ V + TR+P          + +     + 
Sbjct: 7   KGQLIVLSGPSGVGKSTVIAELLGQRNNIHFSVSYTTRQPRVGEQNGVNYNFVSREEFEG 66

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                E + +A    ++      VI+  L  G  +L D         QG           
Sbjct: 67  MIQRDELLEYAEYVNNYYGTSLKVIQEKLDAGIDVLLD------IEVQGAAKVRSRC--- 117

Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                      PD   I  +P   +   +R+  R++  E       E        K RQ 
Sbjct: 118 -----------PDALFIFIIPPSFEELSRRLHGRHTDSEEVIQGRLE--------KARQE 158

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
             +I++       +++       V+  +  I
Sbjct: 159 AKEISKYD---YLVIN-----DKVSNAVSEI 181


>gi|158314448|ref|YP_001506956.1| hypothetical protein Franean1_2620 [Frankia sp. EAN1pec]
 gi|158109853|gb|ABW12050.1| hypothetical protein Franean1_2620 [Frankia sp. EAN1pec]
          Length = 204

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 8/102 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ EG   +GKTT    L  + + +   V    EP           +++    + F  E 
Sbjct: 8   VAVEGTHASGKTTLTHALAAYYRERGVHVACVPEPARNSP--FIEEIVVHGRGE-FDLET 64

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
           E  +FAA     +         +  +++ D+ + +  AY   
Sbjct: 65  EVDLFAAQLSSQLRTA-----RQHTMIIADKTIANVLAYAWL 101


>gi|298481043|ref|ZP_06999237.1| hypothetical protein HMPREF0106_01482 [Bacteroides sp. D22]
 gi|298272617|gb|EFI14184.1| hypothetical protein HMPREF0106_01482 [Bacteroides sp. D22]
          Length = 208

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 32/219 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCG---VDE 61
           I   GI+G+GK+T I+  +  L+ +   V     R          A   +L       +E
Sbjct: 5   IIISGIDGSGKSTIINETQMALEAEGKKVGYIWLRFNHYLTKGMHAIARVLGLSVKVHNE 64

Query: 62  FGAEAEAIVF----------AAARLDHVENVIRP-ALMEGK-ILLCDRFLDSSYAYQGER 109
            G   +  ++              LD   + ++   + +GK  ++CDR++          
Sbjct: 65  MGDVWQHRLYKNQVFCSLYILTTYLDSWMSRLKYNKMAKGKDTVICDRWITDILV-DLAT 123

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            + +  FLDS    + + +     I+     +    R+       E+      E +    
Sbjct: 124 KTHRKDFLDS--RWAKRFMK----IL----PEGA--RMFVVVRNTEALIDCRLENRVDPN 171

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            E R  I+ D+ +       +VD+  +  +    I++ +
Sbjct: 172 FEFRLGIYEDLCKKH--YVTVVDNNGTIANSVKQIIDRL 208


>gi|297801048|ref|XP_002868408.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314244|gb|EFH44667.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 49/240 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   L+       +    D+       GT   + A+  +          +
Sbjct: 80  ISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSAGTDIGKRAKEFM---NSGRLVPD 136

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              I   A RL       R    E    L D F          R  +Q   LD L     
Sbjct: 137 EIVIAMVAGRL------SREDAKEHGW-LLDGF---------PRSFAQAQSLDKLN---- 176

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171
             V PD  ++LD+P +I + R   R     +  +                   +     E
Sbjct: 177 --VKPDIFLLLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEE 234

Query: 172 KRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           K +   QI+      I     D    +D+    + V      ++ ++  KR+     K+D
Sbjct: 235 KVKARLQIYKQNSEAIISAYSDVMVKIDANRPKEVVFEETQTLLSQIQLKRMIKTGKKRD 294


>gi|15594584|ref|NP_212373.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 (dck) [Borrelia
           burgdorferi B31]
 gi|2688138|gb|AAC66630.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 (dck) [Borrelia
           burgdorferi B31]
          Length = 205

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L + L+     V    E                     F  + 
Sbjct: 7   IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 61  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 113

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   + LD  +D   +R++NR    E     DY E
Sbjct: 114 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 158


>gi|39939223|ref|NP_950989.1| guanylate kinase [Onion yellows phytoplasma OY-M]
 gi|45477018|sp|P60554|KGUA_ONYPE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|39722332|dbj|BAD04822.1| guanylate kinase [Onion yellows phytoplasma OY-M]
          Length = 212

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 68/221 (30%), Gaps = 56/221 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLS 56
             GL I   G  G GK T    L    +  N++        TR+P          H  L+
Sbjct: 5   KKGLLIVLSGPSGVGKATVRKAL---FEMTNHNFVYSVSATTRKPRPGEQDGKDYH-FLT 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               E G E    +  A  +DH     +  I+  L +GK +                   
Sbjct: 61  KEEFEKGIENNCFLEWAKFIDHYYGTPKKQIQDFLKQGKEV------------------- 101

Query: 113 QHLFLDSLQEISVQEVM---PDCTIILDLPVDI-GL-KRVQNRYSLRESACLDYFERKDV 167
              FL+   E +        P+   I  +P +   L  R++ R + +E+       + + 
Sbjct: 102 ---FLEIEVEGATHLRKKRIPNTVFIFLVPPEKKALYDRLKKRGTEQEANIAKRIAKANN 158

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             H         +A        +V+       VA     I+
Sbjct: 159 EFH---------LAHKYD--YIVVN-----DEVANAADRII 183


>gi|289192229|ref|YP_003458170.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus sp. FS406-22]
 gi|288938679|gb|ADC69434.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus sp. FS406-22]
          Length = 248

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 59/215 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62
           + I   G+ G GK+T    L + L R N D+ V         ++  R    +     +EF
Sbjct: 1   MLIILTGLPGVGKSTFSKNLAKILSRYNIDIIVL-------GSDLIRESFPIWKETYEEF 53

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +A   +            I  AL +   ++ D   D++Y Y   R    ++     + 
Sbjct: 54  IRKASYGL------------IDSAL-KHYWVIVD---DTNY-YNSMRRDLINIAKKYNKN 96

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++        I L  P+++ +KR   R            E+    + +K  + F     
Sbjct: 97  YAI--------IYLKAPLEVLIKRNIERG-----------EKIPNDVIKKMYEKF----- 132

Query: 183 NQPDR-------CHIVDSAHSFQSVATNILNIVWE 210
           ++P R         ++D+         +I   + E
Sbjct: 133 DEPGRKYKWDKPFLVIDTTRDID--FNDIAKKLIE 165


>gi|115465958|ref|NP_001056578.1| Os06g0109600 [Oryza sativa Japonica Group]
 gi|55296103|dbj|BAD67693.1| putative Uridylate kinase [Oryza sativa Japonica Group]
 gi|55296178|dbj|BAD67896.1| putative Uridylate kinase [Oryza sativa Japonica Group]
 gi|113594618|dbj|BAF18492.1| Os06g0109600 [Oryza sativa Japonica Group]
 gi|215695023|dbj|BAG90214.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197428|gb|EEC79855.1| hypothetical protein OsI_21335 [Oryza sativa Indica Group]
 gi|222634831|gb|EEE64963.1| hypothetical protein OsJ_19856 [Oryza sativa Japonica Group]
          Length = 243

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 35/211 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GK T  + + +     +      +  E             L++ G          
Sbjct: 26  GGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGKLVSSDLIVK 85

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           ++F A R              G     D+FL   +    E   +    +          +
Sbjct: 86  LLFKAMR------------ESGN----DKFLVDGFPRNEENRHAYENIIH---------I 120

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQP 185
            P+  + +D   +   +R+ NR   R+   +D   R+  +  ++     Q +        
Sbjct: 121 EPEFLLFIDCSKEEMERRILNRNQGRDDDNIDTIRRRFDVFQQQTLPVIQYYEKR----- 175

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +   VD       V  ++  I  +L  +++
Sbjct: 176 GKLRKVDGNRQVDEVFEDVKAIFAQLNNQKI 206


>gi|229545817|ref|ZP_04434542.1| shikimate kinase [Enterococcus faecalis TX1322]
 gi|255975847|ref|ZP_05426433.1| shikimate kinase [Enterococcus faecalis T2]
 gi|256853131|ref|ZP_05558501.1| shikimate kinase [Enterococcus faecalis T8]
 gi|256958986|ref|ZP_05563157.1| shikimate kinase [Enterococcus faecalis DS5]
 gi|257079017|ref|ZP_05573378.1| shikimate kinase [Enterococcus faecalis JH1]
 gi|257085177|ref|ZP_05579538.1| shikimate kinase [Enterococcus faecalis Fly1]
 gi|257419302|ref|ZP_05596296.1| predicted protein [Enterococcus faecalis T11]
 gi|294781657|ref|ZP_06746992.1| shikimate kinase [Enterococcus faecalis PC1.1]
 gi|307271012|ref|ZP_07552295.1| shikimate kinase [Enterococcus faecalis TX4248]
 gi|307274955|ref|ZP_07556118.1| shikimate kinase [Enterococcus faecalis TX2134]
 gi|307278068|ref|ZP_07559152.1| shikimate kinase [Enterococcus faecalis TX0860]
 gi|307289112|ref|ZP_07569068.1| shikimate kinase [Enterococcus faecalis TX0109]
 gi|307291990|ref|ZP_07571859.1| shikimate kinase [Enterococcus faecalis TX0411]
 gi|312900766|ref|ZP_07760063.1| shikimate kinase [Enterococcus faecalis TX0470]
 gi|229309129|gb|EEN75116.1| shikimate kinase [Enterococcus faecalis TX1322]
 gi|255968719|gb|EET99341.1| shikimate kinase [Enterococcus faecalis T2]
 gi|256711590|gb|EEU26628.1| shikimate kinase [Enterococcus faecalis T8]
 gi|256949482|gb|EEU66114.1| shikimate kinase [Enterococcus faecalis DS5]
 gi|256987047|gb|EEU74349.1| shikimate kinase [Enterococcus faecalis JH1]
 gi|256993207|gb|EEU80509.1| shikimate kinase [Enterococcus faecalis Fly1]
 gi|257161130|gb|EEU91090.1| predicted protein [Enterococcus faecalis T11]
 gi|294451209|gb|EFG19676.1| shikimate kinase [Enterococcus faecalis PC1.1]
 gi|306496988|gb|EFM66536.1| shikimate kinase [Enterococcus faecalis TX0411]
 gi|306499821|gb|EFM69182.1| shikimate kinase [Enterococcus faecalis TX0109]
 gi|306505465|gb|EFM74651.1| shikimate kinase [Enterococcus faecalis TX0860]
 gi|306508403|gb|EFM77510.1| shikimate kinase [Enterococcus faecalis TX2134]
 gi|306512510|gb|EFM81159.1| shikimate kinase [Enterococcus faecalis TX4248]
 gi|311292247|gb|EFQ70803.1| shikimate kinase [Enterococcus faecalis TX0470]
 gi|315029379|gb|EFT41311.1| shikimate kinase [Enterococcus faecalis TX4000]
 gi|315033975|gb|EFT45907.1| shikimate kinase [Enterococcus faecalis TX0017]
 gi|315036984|gb|EFT48916.1| shikimate kinase [Enterococcus faecalis TX0027]
 gi|315164021|gb|EFU08038.1| shikimate kinase [Enterococcus faecalis TX1302]
 gi|323480730|gb|ADX80169.1| shikimate kinase [Enterococcus faecalis 62]
          Length = 168

 Score = 51.2 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR+      +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIAEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIINEILQQLKE 168


>gi|322795217|gb|EFZ18039.1| hypothetical protein SINV_15235 [Solenopsis invicta]
          Length = 259

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 70/220 (31%), Gaps = 48/220 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +  EG  G+GKTT +S  K+F     L+     V + R+  GT   E   +         
Sbjct: 26  VCVEGNIGSGKTTFLSHFKKFDNVTVLEE---PVELWRDVSGTNLLELMYN--------- 73

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKI----LLCDRFLDSSYAY---QGERDSSQH 114
                 A +F          +    L   K      + +R + S+  +      R+  + 
Sbjct: 74  -EPSRYAFLF-----QSYVQLTMLQLHTCKTPSPYKIMERSVYSAMCFVENLKRRNVLRD 127

Query: 115 LFLDSLQEI------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           + +  L++       +   +  D  + L    +   +R++ R    E+A         + 
Sbjct: 128 VEVTVLEDWYDWCLKNANNIETDLIVYLRTTPETVYERMKQRGRKEENAV-------SLE 180

Query: 169 IHEKRRQI-----FLDIARNQPDRCHIVDSAHSFQSVATN 203
             ++  QI     +    +  P     ++       +   
Sbjct: 181 YLKQIHQIHDDWLYHQTLKPVPSPIITINGDRELNEMVEE 220


>gi|297566843|ref|YP_003685815.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946]
 gi|296851292|gb|ADH64307.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946]
          Length = 214

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 42/211 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63
           ++I+  G  G+GK++  +L+               E G  P  EA      L+    + G
Sbjct: 1   MYIAIAGNIGSGKSSLTALMAE-------------EYGFRPVYEAVDENPYLADFYADMG 47

Query: 64  AEA---EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLD-----SSYAYQGERDSSQ 113
             A   +    A     H+E V          ++ DR  F D      +   QG      
Sbjct: 48  RWAFPSQVFFLAKRLKQHLEEV-----NRHVRVVQDRTVFEDAAIFACNLYRQGHLSERD 102

Query: 114 HLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                 L E I+     PD  I +   +    KR+  R    E    + + R    ++E 
Sbjct: 103 WQTYQQLYEGIAPALRKPDLLIYIRASLPTLKKRIAKRGREYERGIPEEYLRTLNELYES 162

Query: 173 RRQIF------------LDIARNQPDRCHIV 191
             Q +            LD   +  DR  ++
Sbjct: 163 WVQAYALSPKLVLEGDRLDFVESARDRLKLI 193


>gi|67970435|dbj|BAE01560.1| unnamed protein product [Macaca fascicularis]
          Length = 260

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 24  ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKNGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L+  + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLLFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P    I D    F+    +++  V E +
Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTDF-DYLQEVP--ILIPDVNEDFKDKHESLVEKVKEFL 257


>gi|157311054|ref|YP_001469049.1| gp051 [Lactococcus phage KSY1]
 gi|108861394|gb|ABG21593.1| gp051 [Lactococcus phage KSY1]
          Length = 287

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 49/230 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63
           + I+  G  GAGK+   ++L   L     D     EP    P  E               
Sbjct: 1   MLITAAGKIGAGKSALTAMLADVL-----DTKAIYEPIDDNPLLEKFYE----------D 45

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGE----------RDS 111
            +    VF    +     +I+ AL++   +L DR +  DS +  Q            R  
Sbjct: 46  KDTYGFVFQIDMISRRFELIQQALLQNNSVL-DRSILEDSIFLDQLFLEGHVNKYEHRAY 104

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKD 166
            + L    L+   + +  PD  + +D+P D  ++R+  R    E         DYF    
Sbjct: 105 HKLLDRMMLELDVLPKKRPDLLVYIDVPFDKEIERINKRARAFEKVSEGTELWDYF---- 160

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDS--------AHSFQSVATNILNIV 208
             +H K    +++     P   + +D+              V  NI+  +
Sbjct: 161 -AMHSKMYDKWINEFNECP--VYTIDAMKYDYVENEQDRIEVLENIVAKL 207


>gi|149037471|gb|EDL91902.1| deoxythymidylate kinase (predicted), isoform CRA_d [Rattus
           norvegicus]
          Length = 126

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 10/97 (10%)

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LD  ++  V    PD        + + L+      + R    L+ +E       E+    
Sbjct: 28  LDWCKQPDVGLPKPD--------LILFLQLQLLDAASRGEFGLERYE--TGTFQEQVLLC 77

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           F  +   +     +VD++ S + V   I  +  + +Q
Sbjct: 78  FQQLMSEKNLNWKVVDASKSIEDVHEEIRALSEDAIQ 114


>gi|91088145|ref|XP_971294.1| PREDICTED: similar to putative deoxynucleoside kinase [Tribolium
           castaneum]
          Length = 217

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 28/213 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +S EG  GAGK+T I    R   ++     +   R   G          LL     +   
Sbjct: 11  VSIEGNIGAGKSTLIDYFSRISGIETYGEPIETWRNVNGDN--------LLDLMYSDIAQ 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILL------CDRFLDSSYAY-QGERDSSQHLFL 117
             +                +P      + +       +RF     A   G      +  L
Sbjct: 63  WLKVFQNFVQLSRLKVQTSKPKNPNTTVQIFERSLQNNRFCFVELARKGGYLSGPDYAVL 122

Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRR 174
           D   +     +    D  + L    ++  +R++ R    E    LDY       +H+   
Sbjct: 123 DEWYQWIQNNININLDLIVYLRSTPEVVYERIKARGRPEEKKISLDYL----KDLHQSHE 178

Query: 175 QIFLDIARNQPDR-CHIVDSAHSFQSVATNILN 206
                + +   +    ++D+  + + V   +  
Sbjct: 179 D---WLMKEDSETPVLVMDANQTLEEVREQLKQ 208


>gi|62955057|ref|NP_001017540.1| adenylate kinase 5, like [Danio rerio]
 gi|62089505|gb|AAH92184.1| Zgc:113368 [Danio rerio]
 gi|169146141|emb|CAQ13849.1| novel protein (zgc:113368) [Danio rerio]
          Length = 335

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 46/219 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI   G  G+GK T  + +   L+     V            E  R+ LL     +   E
Sbjct: 138 FII--GGPGSGKGTQTAKIA--LRYDFEHV---------SVGEILRNQLLHHAPSDRKWE 184

Query: 66  AEAIVFAAARL--------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             A + A   L        +  +  I+    +G I+  D F                  +
Sbjct: 185 LIAQIIANGELAPQETTIEELKQQFIKKQDAKGFIV--DGF---------------PREI 227

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQ 175
                   Q   PD  I+L        +R++ R S +     +    E++          
Sbjct: 228 SQAFTFEEQIGSPDLVILLACSNQQLRQRLEKRASQQGRPDDNSHAIEKRLDTFKHNIN- 286

Query: 176 IFLDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELV 212
               IA+   +R     VD+      + T+I  IV E +
Sbjct: 287 ---LIAKYYQERGLIVRVDADREEDDIFTDISAIVKERL 322


>gi|219685842|ref|ZP_03540650.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii Far04]
 gi|219672616|gb|EED29647.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii Far04]
          Length = 200

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L   L+     V    E                     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSNELK-----VPFYSELNNDFTLAILDKFYRDKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   I LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|74151963|dbj|BAE32020.1| unnamed protein product [Mus musculus]
          Length = 420

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 221 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 273

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 274 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 326

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 327 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 378

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 379 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 416


>gi|320100638|ref|YP_004176230.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM
          2162]
 gi|319752990|gb|ADV64748.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM
          2162]
          Length = 221

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 22/35 (62%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          G  I F G+EGAGKTTHI LL   L+++   V  T
Sbjct: 2  GRVIVFAGLEGAGKTTHIRLLAIRLKKRGLRVRTT 36


>gi|219684553|ref|ZP_03539496.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii PBr]
 gi|219671915|gb|EED28969.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii PBr]
          Length = 200

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L   L+     V    E                     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSNELK-----VPFYSELNNDFTLAVLDKFYRDKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   I LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|330943544|gb|EGH45882.1| thymidylate kinase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 44

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 25/42 (59%)

Query: 29 QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          + +   V +TREPGGTP AE  R +LL+   +   A+ + ++
Sbjct: 2  RAQGVQVLLTREPGGTPLAERIRELLLAPSDEAMSADTDLLL 43


>gi|51598500|ref|YP_072688.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia garinii
           PBi]
 gi|51573071|gb|AAU07096.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia garinii
           PBi]
          Length = 200

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L   L+     V    E                     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSNELK-----VPFYSELNNDFTLAVLDKFYRDKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   I LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|307264795|ref|ZP_07546357.1| guanylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306920053|gb|EFN50265.1| guanylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 207

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  GAGK T    L    +     +   TR+P      E   +   S    
Sbjct: 6   KKGLLIVLSGPSGAGKGTICKALMEKEKNLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   E ++ +  A    H     ++ +   L EG  ++                    L 
Sbjct: 65  EKMIENDSFLEWAKVYGHYYGTPKDFVLKNLEEGNDVV--------------------LE 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +D    + ++E  P+   I  LP   +    R++ R +  E   +  F+           
Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + ++         +++   S +     I  I+
Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIRAII 185


>gi|270011851|gb|EFA08299.1| hypothetical protein TcasGA2_TC005934 [Tribolium castaneum]
          Length = 221

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 28/213 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +S EG  GAGK+T I    R   ++     +   R   G          LL     +   
Sbjct: 11  VSIEGNIGAGKSTLIDYFSRISGIETYGEPIETWRNVNGDN--------LLDLMYSDIAQ 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILL------CDRFLDSSYAY-QGERDSSQHLFL 117
             +                +P      + +       +RF     A   G      +  L
Sbjct: 63  WLKVFQNFVQLSRLKVQTSKPKNPNTTVQIFERSLQNNRFCFVELARKGGYLSGPDYAVL 122

Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRR 174
           D   +     +    D  + L    ++  +R++ R    E    LDY       +H+   
Sbjct: 123 DEWYQWIQNNININLDLIVYLRSTPEVVYERIKARGRPEEKKISLDYL----KDLHQSHE 178

Query: 175 QIFLDIARNQPDR-CHIVDSAHSFQSVATNILN 206
                + +   +    ++D+  + + V   +  
Sbjct: 179 D---WLMKEDSETPVLVMDANQTLEEVREQLKQ 208


>gi|240103245|ref|YP_002959554.1| putative kinase [Thermococcus gammatolerans EJ3]
 gi|259493980|sp|C5A628|KAD6_THEGJ RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|239910799|gb|ACS33690.1| Nucleotide kinase, shikimate kinase related [Thermococcus
           gammatolerans EJ3]
          Length = 177

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 69/214 (32%), Gaps = 55/214 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G GKTT   LL   L    Y+    R+        A    +     DE   
Sbjct: 1   MIIAVTGTPGVGKTTVSKLLAEKL---GYEYVSLRDY-------AIEKGIGEMKGDELEV 50

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E + + +   R             +GK ++ D  L                         
Sbjct: 51  EVDELTYNFERD-----------FKGKNVVVDGHL------------------------- 74

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              +  D  ++L     +  +R+  R   RE    +  E + V +        L  A  +
Sbjct: 75  SHFLNADLVVVLRAHPRLIGERLTERGYSREKVGEN-VEAELVDVI-------LVEALEE 126

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
            +    VD+   + + V   IL ++ + V+KRV 
Sbjct: 127 NENVIEVDTTGKTPEEVVNEILELIEKGVKKRVG 160


>gi|308159065|gb|EFO61617.1| Hypothetical protein GLP15_4359 [Giardia lamblia P15]
          Length = 342

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  +G  GAGK+T    LK++L    ++  +  E            + L           
Sbjct: 65  IVVDGPIGAGKSTFCRHLKKYLIDHGFEATIIEEAVADKRFGENGGITLEEYYK--NPRE 122

Query: 67  EAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHL 115
            A  F      A     +         +   ++ DR+L S+ A+       G     Q  
Sbjct: 123 LAFQFQEQVVHALGKQLLHCRFAEEYQQYDFIIFDRWLPSASAFILFKMRDGYITKEQGQ 182

Query: 116 FLDSL--QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-----ESACLDYFERKDVM 168
           +L  L    +    ++P   I   +   I    +++R S       E   LD   R+   
Sbjct: 183 YLHYLIDHYMLRAGILPAFHIRFAIDPSICEDHIKDRASDDPHRLCELEALDTI-RQTND 241

Query: 169 IHEKRRQIFLDIARNQPDRCHIV 191
              + R ++  +   +P     +
Sbjct: 242 FLLEHRGVYNPLVAIEPGNVRTI 264


>gi|256811473|ref|YP_003128842.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus fervens AG86]
 gi|256794673|gb|ACV25342.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus fervens AG86]
          Length = 248

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 51/211 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61
           + I   G+ GAGK+T    L + L + N DV V         ++  R    +      + 
Sbjct: 1   MLIILTGLPGAGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPIWKEKYEEF 53

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 +++  A              ++   ++ D   D++Y Y   R    ++     +
Sbjct: 54  IRKATYSLIDNA--------------LKDYWVIVD---DTNY-YNSMRRDLINIAKKYNK 95

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++        I L  P+D+ ++R   R            E+    + +K  + F +  
Sbjct: 96  NYAI--------IYLKAPLDVLIERNIMRG-----------EKIPNEVIKKMYEKFDEPG 136

Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210
           +     +    +D+         NI   + E
Sbjct: 137 KKYKWDEPFLTIDTTKDID--FGNITKKLIE 165


>gi|15673140|ref|NP_267314.1| deoxynucleoside kinase [Lactococcus lactis subsp. lactis Il1403]
 gi|12724122|gb|AAK05256.1|AE006348_1 deoxynucleoside kinase [Lactococcus lactis subsp. lactis Il1403]
 gi|326406705|gb|ADZ63776.1| deoxyguanosine kinase [Lactococcus lactis subsp. lactis CV56]
          Length = 212

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 70/233 (30%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++    L   L+               P  +                + 
Sbjct: 2   IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117
            A +     L+     I+ A  +   +L DR +       +  Y+    +   L +    
Sbjct: 48  YAFLLQIYFLNKRFESIKMAYRQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106

Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             + L+E+  + +  PD  + +D+  +  L R+  R           FE+  +   E  +
Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156

Query: 175 QIFLDIARNQPDRCH--------IVDS------AHS--FQSVATNILNIVWEL 211
             +  +    PD            +D        +      V   I N + +L
Sbjct: 157 DYYAQVHDEYPDWYKNYNISPKLRIDGDSIDFVNNPEHLDEVLGQIDNELKKL 209


>gi|29376130|ref|NP_815284.1| shikimate kinase [Enterococcus faecalis V583]
 gi|227518758|ref|ZP_03948807.1| shikimate kinase [Enterococcus faecalis TX0104]
 gi|227553369|ref|ZP_03983418.1| shikimate kinase [Enterococcus faecalis HH22]
 gi|229550009|ref|ZP_04438734.1| shikimate kinase [Enterococcus faecalis ATCC 29200]
 gi|255972791|ref|ZP_05423377.1| predicted protein [Enterococcus faecalis T1]
 gi|256762495|ref|ZP_05503075.1| shikimate kinase [Enterococcus faecalis T3]
 gi|257422613|ref|ZP_05599603.1| shikimate kinase [Enterococcus faecalis X98]
 gi|312951500|ref|ZP_07770396.1| shikimate kinase [Enterococcus faecalis TX0102]
 gi|81585167|sp|Q834S1|AROK_ENTFA RecName: Full=Shikimate kinase; Short=SK
 gi|29343592|gb|AAO81354.1| shikimate kinase [Enterococcus faecalis V583]
 gi|227073753|gb|EEI11716.1| shikimate kinase [Enterococcus faecalis TX0104]
 gi|227177494|gb|EEI58466.1| shikimate kinase [Enterococcus faecalis HH22]
 gi|229304922|gb|EEN70918.1| shikimate kinase [Enterococcus faecalis ATCC 29200]
 gi|255963809|gb|EET96285.1| predicted protein [Enterococcus faecalis T1]
 gi|256683746|gb|EEU23441.1| shikimate kinase [Enterococcus faecalis T3]
 gi|257164437|gb|EEU94397.1| shikimate kinase [Enterococcus faecalis X98]
 gi|310630466|gb|EFQ13749.1| shikimate kinase [Enterococcus faecalis TX0102]
 gi|315152477|gb|EFT96493.1| shikimate kinase [Enterococcus faecalis TX0031]
 gi|315155755|gb|EFT99771.1| shikimate kinase [Enterococcus faecalis TX0043]
 gi|315158079|gb|EFU02096.1| shikimate kinase [Enterococcus faecalis TX0312]
 gi|315575861|gb|EFU88052.1| shikimate kinase [Enterococcus faecalis TX0309B]
 gi|315580513|gb|EFU92704.1| shikimate kinase [Enterococcus faecalis TX0309A]
 gi|327535139|gb|AEA93973.1| shikimate kinase [Enterococcus faecalis OG1RF]
          Length = 168

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR+      +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRITEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIINEILQQLKE 168


>gi|254493569|ref|ZP_05106740.1| predicted protein [Neisseria gonorrhoeae 1291]
 gi|268594628|ref|ZP_06128795.1| predicted protein [Neisseria gonorrhoeae 35/02]
 gi|268598776|ref|ZP_06132943.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|268601135|ref|ZP_06135302.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|268603453|ref|ZP_06137620.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|268681933|ref|ZP_06148795.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|268684148|ref|ZP_06151010.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|268686401|ref|ZP_06153263.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044043|ref|ZP_06569759.1| predicted protein [Neisseria gonorrhoeae DGI2]
 gi|226512609|gb|EEH61954.1| predicted protein [Neisseria gonorrhoeae 1291]
 gi|268548017|gb|EEZ43435.1| predicted protein [Neisseria gonorrhoeae 35/02]
 gi|268582907|gb|EEZ47583.1| thymidylate kinase [Neisseria gonorrhoeae MS11]
 gi|268585266|gb|EEZ49942.1| thymidylate kinase [Neisseria gonorrhoeae PID18]
 gi|268587584|gb|EEZ52260.1| thymidylate kinase [Neisseria gonorrhoeae PID1]
 gi|268622217|gb|EEZ54617.1| thymidylate kinase [Neisseria gonorrhoeae PID332]
 gi|268624432|gb|EEZ56832.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679]
 gi|268626685|gb|EEZ59085.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035]
 gi|291012506|gb|EFE04495.1| predicted protein [Neisseria gonorrhoeae DGI2]
          Length = 80

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           D+    + R  +L++ ++ P +  ++++  + + V   I + V 
Sbjct: 2   DLDFFHRTRARYLELVKDNP-KAVVINAEQTIELVQAEIESAVK 44


>gi|281342761|gb|EFB18345.1| hypothetical protein PANDA_010124 [Ailuropoda melanoleuca]
          Length = 329

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 40/195 (20%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P                  
Sbjct: 40  QKGKFPVIAIEGLDATGKTTVTQSVSDSLKA----VLLKSPPACISQWRKI--------F 87

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLD 118
           D+         ++         + + +      ++ DR+  S+  Y    + +     L 
Sbjct: 88  DDEPTIIRRAFYSLGNYIVASEIAKESSKSP--VIVDRYWHSTATYAIATEVTGGLQHLP 145

Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  Q          D           +  +  + R++ R   R     +  E   V
Sbjct: 146 PAHHPIYQWPR-------DLLKPDLVLLLTVSPEERMHRIEGRGMERTREEAE-LEANSV 197

Query: 168 MIH----EKRRQIFL 178
                   + RQ FL
Sbjct: 198 FRQKYVSRRARQGFL 212


>gi|74219719|dbj|BAE29625.1| unnamed protein product [Mus musculus]
          Length = 420

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 221 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 273

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 274 IIRRAFYSLGNYLVASGIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 326

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 327 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 378

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 379 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 416


>gi|26342525|dbj|BAB23961.2| unnamed protein product [Mus musculus]
          Length = 332

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 20/168 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58
           I+ +G   +GK      + + L  K+Y     +    T        +  S          
Sbjct: 73  ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 132

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108
                D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      QG 
Sbjct: 133 DPKSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGY 191

Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                    + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 192 IRKQCVDHYNEIERLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 239


>gi|20807954|ref|NP_623125.1| guanylate kinase [Thermoanaerobacter tengcongensis MB4]
 gi|22095790|sp|Q8R9S6|KGUA_THETN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|20516525|gb|AAM24729.1| Guanylate kinase [Thermoanaerobacter tengcongensis MB4]
          Length = 206

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  GAGK T    L    +     +   TR+P      +   +   S    
Sbjct: 5   KQGLLIVISGPSGAGKGTICKALIEKEKDLKLSISATTRQPRAGEV-DGKNYFFKSEEEF 63

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +   E +A +  A   DH     +  +   L EG  ++                    L 
Sbjct: 64  KRMIEEDAFLEWAKVYDHYYGTPKEFVLKNLEEGNDVV--------------------LE 103

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +D    + V+E  P+   I  LP   +    R++ R +  E   +  F+           
Sbjct: 104 IDIQGALKVKEKFPEGVFIFILPPSMEELRNRIKKRGTESEEEIIKRFKS---------- 153

Query: 175 QIFLDIARNQPDRCHIV--DSAHSFQSVATNILN 206
             + ++         ++  D   + + +   I+ 
Sbjct: 154 -AYEELNYVSKYNYVVINDDVDRAVEKIRAIIIA 186


>gi|328950284|ref|YP_004367619.1| Deoxyadenosine kinase [Marinithermus hydrothermalis DSM 14884]
 gi|328450608|gb|AEB11509.1| Deoxyadenosine kinase [Marinithermus hydrothermalis DSM 14884]
          Length = 209

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+  G  G+GK+T  ++L    +       V   P         R       V     
Sbjct: 1   MYIAIAGNIGSGKSTLTAMLAERYRLHPVYEAVEENPYLEDFYRDMRAWAFHSQV----- 55

Query: 65  EAEAIVFAAARL-DHVENVI-RPALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLDSLQ 121
                 F A RL  H++ +  R  +++ + +  D F+ + +   QG           +L 
Sbjct: 56  -----FFLARRLEQHLKEINGRKRVVQDRTIFEDAFIFAKNLHRQGYLSERDWRTYLALY 110

Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           E I+    MPD  + +   +     R+  R    E A  D + +    ++E
Sbjct: 111 EGIAPALRMPDRLVYIRASLPTLRARIAKRGRTYERAIPDAYLQALNELYE 161


>gi|17227564|ref|NP_484112.1| adenylate kinase [Nostoc sp. PCC 7120]
 gi|21263761|sp|Q8Z0M3|KAD2_ANASP RecName: Full=Probable adenylate kinase 2; Short=AK 2; AltName:
           Full=ATP-AMP transphosphorylase 2
 gi|17135046|dbj|BAB77592.1| adenylate kinase [Nostoc sp. PCC 7120]
          Length = 184

 Score = 50.8 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 29/204 (14%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK+T    L   L           E       E  R  +         A+  
Sbjct: 4   VILGGSGSGKSTQAQRLCSHL-----------EITQISTGEILREAISHLSELGRHAQPY 52

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            I       + +  +IR  L +  ++  D ++   Y     +       LD L       
Sbjct: 53  MIKGELVPDEMIIELIRLRLKKSDVI--DGWVLEGYPRTAFQAEELDFLLDEL------G 104

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQ 184
              D  I L +P  + + R   R    +    +  +R+  + +++     + +       
Sbjct: 105 QKLDWAIYLQVPEAVMVSRSLGRSLPDDQ--PEIVQRRVEIFYDRTVPILEYYDRR---- 158

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
             R   ++   S + V  +IL ++
Sbjct: 159 -RRLLTINGDQSPELVLQSILKLL 181


>gi|168027631|ref|XP_001766333.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682547|gb|EDQ68965.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 350

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 37/242 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           +SFEG  G GK+T + LL+   + +     + +EP           + +L     +    
Sbjct: 81  VSFEGNIGVGKSTILKLLQSHPRLQGKTEVL-QEPIWEWQNVKGTGLNMLDAFYKDPKRY 139

Query: 66  AEA---IVFAAARLDH---VENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLD 118
           A      VF    L      +      L+  + +L DR +   +   QG  +S +    D
Sbjct: 140 AYLFQSFVFTTRFLQQNTAAKESTAALLLMERSVLTDRCVFVKTCTEQGYFNSLESAAYD 199

Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERK--------- 165
           +  +     +  V+P   + L     +   R++ R    E+   L+Y +           
Sbjct: 200 AWYDGVVSTLPGVVPHAFVYLRADPSVCYDRLKTRGRSEEAGVSLEYLQSLHSKHEKWFI 259

Query: 166 DVMIH--------EKRRQIFLDIARNQPDRCH-----IVDSAHSFQ--SVATNILNIVWE 210
           D             K +  +     N P         +VD ++S +   ++  +  +V E
Sbjct: 260 DSAFKGAGNGNWGGKSQAGYFFTHSNVPSVIKGRPVFVVDCSYSLEFGKLSEEVDRVVEE 319

Query: 211 LV 212
           +V
Sbjct: 320 IV 321


>gi|121600183|ref|YP_991854.1| deoxynucleoside kinase family protein [Burkholderia mallei SAVP1]
 gi|124383780|ref|YP_001027079.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC
           10229]
 gi|126450071|ref|YP_001081730.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC
           10247]
 gi|238562129|ref|ZP_04609907.1| deoxynucleoside kinase family protein [Burkholderia mallei GB8
           horse 4]
 gi|251766686|ref|ZP_04819758.1| deoxynucleoside kinase family protein [Burkholderia mallei PRL-20]
 gi|254202590|ref|ZP_04908953.1| deoxynucleoside kinase family protein [Burkholderia mallei FMH]
 gi|121228993|gb|ABM51511.1| deoxynucleoside kinase family protein [Burkholderia mallei SAVP1]
 gi|124291800|gb|ABN01069.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC
           10229]
 gi|126242941|gb|ABO06034.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC
           10247]
 gi|147746837|gb|EDK53914.1| deoxynucleoside kinase family protein [Burkholderia mallei FMH]
 gi|238523239|gb|EEP86679.1| deoxynucleoside kinase family protein [Burkholderia mallei GB8
           horse 4]
 gi|243064914|gb|EES47100.1| deoxynucleoside kinase family protein [Burkholderia mallei PRL-20]
          Length = 229

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 20  RYLAIEGPIGVGKTTFATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 72

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +     I  A      ++ D F+   +  +A     D    L+     
Sbjct: 73  Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 128 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 168


>gi|54114922|gb|AAH27329.1| Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Mus
           musculus]
 gi|74142469|dbj|BAE31987.1| unnamed protein product [Mus musculus]
 gi|74151705|dbj|BAE29646.1| unnamed protein product [Mus musculus]
 gi|74178017|dbj|BAE29803.1| unnamed protein product [Mus musculus]
 gi|74181304|dbj|BAE29932.1| unnamed protein product [Mus musculus]
          Length = 420

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 221 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 273

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 274 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 326

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 327 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 378

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 379 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 416


>gi|307297650|ref|ZP_07577456.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916910|gb|EFN47292.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 214

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 80/219 (36%), Gaps = 24/219 (10%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK++  SLL+  L  +     V   P                           + F  
Sbjct: 10  GAGKSSLTSLLEETLGFRGVYEAVDENPFLEDFYSNMERWAFHSQ----------LFFLI 59

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDSSQ-HLFLDSLQEISV 125
            R D ++ V+     EG ++L DR +         +    G  D     L+LD+ + +S 
Sbjct: 60  KRFDFLKRVVT----EGAVILQDRTIYEDVEIFARNLKLMGYIDERDWRLYLDTYETLSE 115

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR-RQIFLDIARN 183
               PD  + +    ++ LKR++ R    ES    DY ER + +  E   R  F      
Sbjct: 116 HLTAPDGIVYIKCTKNVLLKRIKKRGRGFESGVSEDYIERLNGLYEEWIGRVTFCRKLII 175

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             D+   V++A   + V   I     EL+    S L S+
Sbjct: 176 DGDKYDFVENAQDREDVLRLISRFTAELMAGVQSKLFSR 214


>gi|329115895|ref|ZP_08244612.1| deoxyguanosine kinase [Streptococcus parauberis NCFD 2020]
 gi|326906300|gb|EGE53214.1| deoxyguanosine kinase [Streptococcus parauberis NCFD 2020]
          Length = 213

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 47/233 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     +V         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYE----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117
           +  A +     L+     I+ A      +L DR +       +  Y+    +   L +  
Sbjct: 47  KKYAFLLQIFFLNKRFKSIKEAYKADNNIL-DRSIFEDELFLTLNYKNGNVTEAELEIYK 105

Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM---- 168
               + L+E+  + +  PD  I +D+  +  L+R++ R           FE+ D      
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFERMLERIEKRGRS--------FEQVDDNPSLE 157

Query: 169 -IHEKRRQIFLDIARNQPDRCH------IVDSAHSFQSVATNILNIVWELVQK 214
             +++    + +   N            ++D   +   +   +L +V E ++K
Sbjct: 158 HYYQQVHGEYPEWYENYDVSPKMKINGDVLDFVQNEDDL-KRVLAMVDEKLKK 209


>gi|224531866|ref|ZP_03672498.1| deoxyguanosine/deoxyadenosine kinase [Borrelia valaisiana VS116]
 gi|224511331|gb|EEF81737.1| deoxyguanosine/deoxyadenosine kinase [Borrelia valaisiana VS116]
          Length = 200

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GKTT  ++L + L+     V    E                     F  + 
Sbjct: 2   IVIEGLIGVGKTTLGNILSKELK-----VPFYSELNNDFTLAILGKFYKDKSRWAFPVQ- 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119
             I F   R   ++ V R    +G   + DR +     +           D    +++D 
Sbjct: 56  --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFAALLNCDGYISDEEYKIYIDL 108

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
           L  +      P   + LD  +D   +R++NR    E     DY E
Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153


>gi|149711435|ref|XP_001500629.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 39 kDa
           subunit [Equus caballus]
          Length = 355

 Score = 50.8 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 20/168 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58
           I+ +G   +GK      +   L  K++          T        V LS          
Sbjct: 60  ITVDGNICSGKGKLAKEIAEKLGLKHFPEAGIHYADSTTGDGKPLDVELSGNCSLEKFYD 119

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108
                D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      QG 
Sbjct: 120 DPKSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGF 178

Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                    + ++++++ E + P   I +D+PV     R+Q R +  E
Sbjct: 179 IRKQCVDHYNEVKKVTICEYLPPHVVIYVDVPVPEIQSRIQKRGNPHE 226


>gi|313665475|ref|YP_004047346.1| deoxynucleoside kinase [Mycoplasma leachii PG50]
 gi|312949864|gb|ADR24460.1| deoxynucleoside kinase [Mycoplasma leachii PG50]
          Length = 205

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T    + + L  + +   V + P      +  +  +    +    A +
Sbjct: 3   IAIFGTVGAGKSTISQEISKRLGYEIFKEPVEKNPYFEQYYKDLKKTVFKMQIYMLTARS 62

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + +     +  ++EN+I    L+E  I     F+  +Y          + +++    + +
Sbjct: 63  KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQIDYNTYIEFYNNVVL 113

Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +  P      D  I L +     + R++ R    E    D          E   + + 
Sbjct: 114 ENLKIPENKLNFDIVIYLKVSTKTAISRIKKRGRAEELLIGD-------EYWETLNKNYE 166

Query: 179 DIARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211
           +  +         +VD+      V T I  I+ +L
Sbjct: 167 EFYKQNIYNFPFFVVDAELD---VKTQIELIMNKL 198


>gi|326389550|ref|ZP_08211117.1| guanylate kinase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994555|gb|EGD52980.1| guanylate kinase [Thermoanaerobacter ethanolicus JW 200]
          Length = 207

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  GAGK T    L    +     +   TR+P      E   +   S    
Sbjct: 6   KKGLLIVLSGPSGAGKGTICKALMEKEKNLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   E ++ +  A    H     ++ +   L EG  ++                    L 
Sbjct: 65  EKMIENDSFLEWAKVYGHYYGTPKDFVLKNLEEGNDVV--------------------LE 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +D    + ++E  P+   I  LP   +    R++ R +  E   +  F+           
Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + ++         +++   S +     I  I+
Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIRAII 185


>gi|281491654|ref|YP_003353634.1| deoxynucleoside kinase [Lactococcus lactis subsp. lactis KF147]
 gi|281375372|gb|ADA64885.1| Deoxynucleoside kinase [Lactococcus lactis subsp. lactis KF147]
          Length = 212

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 71/233 (30%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++    L   L+               P  +                + 
Sbjct: 2   IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117
            A +     L+     I+ A ++   +L DR +       +  Y+    +   L +    
Sbjct: 48  YAFLLQIYFLNKRFESIKMAYLQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106

Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             + L+E+  + +  PD  + +D+  +  L R+  R           FE+  +   E  +
Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156

Query: 175 QIFLDIARNQPDRCH--------IVDS------AHS--FQSVATNILNIVWEL 211
             +  +    PD            +D        +      V   I N + +L
Sbjct: 157 DYYAQVHDEYPDWYKNYNISPKLRIDGDSIDFVNNPEHLDEVLGQIDNELKKL 209


>gi|302389586|ref|YP_003825407.1| guanylate kinase [Thermosediminibacter oceani DSM 16646]
 gi|302200214|gb|ADL07784.1| guanylate kinase [Thermosediminibacter oceani DSM 16646]
          Length = 204

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 28/175 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G+ I   G  GAGK T  +LL +        V   TR P                  +
Sbjct: 3   KKGMLIVLSGPSGAGKGTLCNLLLQRRPELALSVSVTTRPPRPGEVHGVNYFFTDRENFE 62

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +   + E  +  A   ++        +   L  GK ++ +         QG +   ++  
Sbjct: 63  QMIRKGE-FLEWARVYNNYYGTPRKFVEEQLEAGKDVILE------IDIQGAKQVKENC- 114

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
                        PD   I  LP   +    R++ R S  E +     +  +  +
Sbjct: 115 -------------PDAVFIFILPPDIEELKNRIKKRGSETEESFNLRIKSAEEEL 156


>gi|254784778|ref|YP_003072206.1| deoxynucleoside kinase family protein [Teredinibacter turnerae
           T7901]
 gi|237683798|gb|ACR11062.1| deoxynucleoside kinase family protein [Teredinibacter turnerae
           T7901]
          Length = 228

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 67/211 (31%), Gaps = 46/211 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG  G GKT+    L       NY+  + R     P  E           ++  A
Sbjct: 18  RYIAVEGPIGVGKTSLARRLALTF---NYETLLER-AEDNPFLEKFY------ANEKNAA 67

Query: 65  EAEAIVFAAARLDHV-----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + F   R+  +      ++  P  +   +L  DR     +A Q   D         
Sbjct: 68  LPTQLFFLFQRMQQLNALQQHDMFEPVRVADFLLEKDR----LFA-QVVLDEDALRIYHQ 122

Query: 120 LQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + + +++    PD  I L  PV +  +R+Q R                V   +     +L
Sbjct: 123 VYDHLTIDAPKPDLVIYLQAPVQVLTERIQRR---------------GVAFEQTISAAYL 167

Query: 179 DIARNQPDRC---------HIVDSAHSFQSV 200
           +       R           IV++A     V
Sbjct: 168 EELNQAYTRFFHYYDAAPLLIVNAA-DIDWV 197


>gi|227893867|ref|ZP_04011672.1| deoxyadenosine kinase [Lactobacillus ultunensis DSM 16047]
 gi|227864356|gb|EEJ71777.1| deoxyadenosine kinase [Lactobacillus ultunensis DSM 16047]
          Length = 215

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     L+H    I  A+ E   +  DR  + D+ +    A     D ++    D L
Sbjct: 53  --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            E  +++        PD  I + + +D  L R++ R    E    D
Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLARIKKRGRAFEQISSD 155


>gi|110669293|ref|YP_659104.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi
           DSM 16790]
 gi|109627040|emb|CAJ53516.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi
           DSM 16790]
          Length = 413

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 19/156 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAE 65
           I F G+ G GKTT I+ L ++L+ +   V +         A E  R             +
Sbjct: 216 IVFTGVNGVGKTTSIAKLVQYLESRGLSVVMANGDTYRAGANEQIRE-----HAKTLDTK 270

Query: 66  AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A          + + +  A      ++L D            R  + +  +  L++I 
Sbjct: 271 LIAHEQGGDPAAVLYDAVEYAEANDIDVVLGD---------TAGRLHTSNDLMAQLEKID 321

Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158
            + V PD T+ +D  +     ++R +      E   
Sbjct: 322 -RVVNPDMTLFVDEAVAGQDAVERAKQFNEAAEIDG 356


>gi|170295834|ref|NP_955789.2| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial precursor [Rattus norvegicus]
 gi|81882328|sp|Q561S0|NDUAA_RAT RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|62531217|gb|AAH93375.1| Ndufa10 protein [Rattus norvegicus]
 gi|149037564|gb|EDL91995.1| rCG55630, isoform CRA_b [Rattus norvegicus]
          Length = 355

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 20/168 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58
           I+ +G   +GK      +   L  K+Y     +    T        +  S          
Sbjct: 60  ITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYD 119

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108
                D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      QG 
Sbjct: 120 NPKSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGF 178

Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                    + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 179 IRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 226


>gi|9634821|ref|NP_039114.1| Deoxycytidine kinase [Fowlpox virus]
 gi|18203075|sp|Q9J579|DCK2_FOWPN RecName: Full=Probable deoxycytidine kinase FPV151; Short=dCK
 gi|7271649|gb|AAF44495.1|AF198100_142 ORF FPV151 Deoxycytidine kinase [Fowlpox virus]
 gi|41023436|emb|CAE52690.1| hypothetical protein [Fowlpox virus isolate HP-438/Munich]
          Length = 235

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 41/227 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS EG   AGK+T I++L        Y+V   +EP            LL     +    A
Sbjct: 26  ISIEGNISAGKSTLINILSD----NGYNVV--QEPLEQWRGNN----LLDKLYKDPSRWA 75

Query: 67  EAIVFAAARLDHVENVIRPALMEGK-------ILLCDRFLDSSYAY-QGERDSSQHLFLD 118
                 A            AL + K        +  D+++ ++  +  G  D ++    +
Sbjct: 76  YTFQSHAF--WTRTKTYIDALNKNKGNIILERSVFSDKYIFATALHDIGYIDDTEWNIYN 133

Query: 119 SLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175
              +   +  ++  D  I L    DI  KR+ NR    E+   +DY      ++H+K  +
Sbjct: 134 EYSKWMTEFMDIKIDGIIYLKTSPDICYKRMLNRARHEENTVKIDYL----NLLHDKHEK 189

Query: 176 IFLDIARNQPDRCHI-----------VDSAHSFQSVATNILNIVWEL 211
               ++ N      +           +D ++   S+ +NI + + EL
Sbjct: 190 ---WLSENNEHEFKVPVLEINGDGDFIDDSNRQSSILSNIYDFISEL 233


>gi|294155669|ref|YP_003560053.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145]
 gi|291599936|gb|ADE19432.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145]
          Length = 130

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 9/92 (9%)

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RRQIFLDIARNQP 185
           PD  + LD+  ++  +R+  R    E    D    +++    +     +  F+ +A    
Sbjct: 43  PDFALFLDVNFEVVKQRIIKRNRSSEVDNFD----ENLDYFYRLWSMYKDEFISLANRYK 98

Query: 186 DRCHIVDSA-HSFQSVATNILNIVWELVQKRV 216
               I+D+  ++ + V   ++N + ++  K +
Sbjct: 99  IPFVIIDANENNEEKVLEKVINEIEKIKDKYL 130


>gi|171685546|ref|XP_001907714.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942734|emb|CAP68387.1| unnamed protein product [Podospora anserina S mat+]
          Length = 211

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 62/203 (30%), Gaps = 33/203 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA----EA 66
           G  GAGK T   +L                       +  R  + S   D+  A      
Sbjct: 16  GAPGAGKGTLCKMLAEA-----------NNVDHLSLGDLLRQTVSSPNADQLIAGCIHRG 64

Query: 67  EAIVFAAARLDHVENVIRP-ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           E +            V +P +   G+ LL D F                  LD  +E   
Sbjct: 65  ELLPTHILHELLYHRVAQPVSSTAGRPLLLDGF---------------PRRLDQAREFEA 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               P   +  D P D+  +RV  R   R    ++ F+++     E    I    AR + 
Sbjct: 110 FGP-PKLILFFDCPEDLARERVITRKLGRFGDTVEIFDKRYSEFRESNPPILSHYARPE- 167

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
            R   +D++ + +     +   +
Sbjct: 168 GRLITIDTSGATEESYQKLQAAL 190


>gi|291242167|ref|XP_002740977.1| PREDICTED: UMP-CMP kinase 1-like [Saccoglossus kowalevskii]
          Length = 197

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 78/218 (35%), Gaps = 57/218 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  S +    +     VH+        A +  R        +    ++E   
Sbjct: 13  GAPGAGKGTQCSNIVEKFKY----VHL-------SAGDLLR-------AERNEPKSEF-- 52

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFL-DSSYAYQGERDSSQHLFL--DSL 120
                     ++I   + EGKI+       L +R + DS  A QG            D+L
Sbjct: 53  ---------GDLIATHIKEGKIVPVAITCSLLERAMNDSMKAGQGNNFVIDGFPRNQDNL 103

Query: 121 QEISVQEVMPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
              + Q  M D T     +  D P +I + R  +R +       D   ++ +   +KR +
Sbjct: 104 DGWNCQ--MGDKTNLKFVLFFDCPEEICIDRCISRGAAGSGRTDD--NKESL---KKRFE 156

Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
            ++   +       + +    VD + S  +V T++  +
Sbjct: 157 TYVTSTKPIIDHYAEKNLVKKVDGSRSADAVFTDVQAL 194


>gi|117606366|ref|NP_065582.3| UMP-CMP kinase 2, mitochondrial precursor [Mus musculus]
 gi|187470852|sp|Q3U5Q7|CMPK2_MOUSE RecName: Full=UMP-CMP kinase 2, mitochondrial; AltName:
           Full=Thymidylate kinase LPS-inducible member;
           Short=TYKi; Flags: Precursor
          Length = 447

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 248 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 300

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 301 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 353

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 354 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 405

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 406 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 443


>gi|225708806|gb|ACO10249.1| Deoxynucleoside kinase [Caligus rogercresseyi]
          Length = 233

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 28/223 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEF 62
           +  EG   +GKTT + L +  L   +    V V  EP          ++L  +      +
Sbjct: 6   VCVEGNIASGKTTFLKLFEAGLSGCKSGPSVRVVEEPVSAWQNLHGHNILELMYKDPSRW 65

Query: 63  GAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           G   ++ V       H   V+  I+  LME  +L  ++   ++    G    +++  L  
Sbjct: 66  GHLFQSYVALTMTQVHTMRVKEEIK--LMERSLLTAEKCFAANLYNSGNMSEAEYRVLKE 123

Query: 120 ----LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRR 174
               L      +V+PD  + L    +  LKRV +R    ES   LDY  R+   +HE   
Sbjct: 124 WYAYLNAHHKMKVLPDLIVYLQTTPETCLKRVISRSRHEESTIPLDYL-RELHELHEAC- 181

Query: 175 QIFLDIARNQPDR--CHIVDSA-----HSFQSVATNILNIVWE 210
                + ++   +    +VD+       S ++    +LN + +
Sbjct: 182 -----LIQDSSLKVPVLVVDAENNNFLLSPETSFKPVLNQIMD 219


>gi|53725772|ref|YP_103881.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC
           23344]
 gi|254178917|ref|ZP_04885571.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC
           10399]
 gi|254207928|ref|ZP_04914278.1| deoxynucleoside kinase family protein [Burkholderia mallei JHU]
 gi|254355930|ref|ZP_04972208.1| deoxynucleoside kinase family protein [Burkholderia mallei
           2002721280]
 gi|52429195|gb|AAU49788.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC
           23344]
 gi|147751822|gb|EDK58889.1| deoxynucleoside kinase family protein [Burkholderia mallei JHU]
 gi|148024905|gb|EDK83083.1| deoxynucleoside kinase family protein [Burkholderia mallei
           2002721280]
 gi|160694831|gb|EDP84839.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC
           10399]
          Length = 227

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 18  RYLAIEGPIGVGKTTFATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A + +     I  A      ++ D F+   +  +A     D    L+     
Sbjct: 71  Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +      PD  + L    ++   R+Q R    E    D +
Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 166


>gi|192910870|gb|ACF06543.1| uridylate kinase [Elaeis guineensis]
          Length = 205

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 63/216 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + + +      +            A +  R  + S   +          
Sbjct: 25  GGPGSGKGTQCANIVKHF---GF--------THLSAGDLLRAEIKSGSENG--------- 64

Query: 71  FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114
                      +I+  + EGKI+                  D+FL   +     R+    
Sbjct: 65  ----------TMIQNMIKEGKIVPSEVTIKLLQKAMLETGNDKFLIDGF----PRNEENR 110

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
              + L +I      P+  +  D P +   +R+ +R   R+   ++   ++  +  E   
Sbjct: 111 AAFEKLTKI-----EPEFVLFFDCPEEEMERRLLSRNQGRDDDNIETIRKRFKVFVESSL 165

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
              + +         +   +D+A     V   +  I
Sbjct: 166 PVVEYY-----AAKGKVRKIDAAKPIDEVFEAVKAI 196


>gi|116512013|ref|YP_809229.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris SK11]
 gi|116107667|gb|ABJ72807.1| Deoxynucleoside kinase [Lactococcus lactis subsp. cremoris SK11]
          Length = 212

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 51/233 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++    L   L+               P  +                + 
Sbjct: 2   IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117
            A +     L+     I+ A  +   +L DR +       +  Y+    +   L +    
Sbjct: 48  YAFLLQIYFLNKRFESIKMAYRQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106

Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             + L+E+  + +  PD  + +D+  +  L R+  R           FE+  +   E  +
Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156

Query: 175 QIFLDIARNQPDRCH--------IVDSAHSFQSV-----ATNILNIVWELVQK 214
             +  +    PD            +D   S   V        +L  + + ++K
Sbjct: 157 DYYAQVHDEYPDWYKNYDISPKLRIDGD-SIDFVNNPEHLDEVLGQIDDELKK 208


>gi|34785825|gb|AAH57565.1| Cmpk2 protein [Mus musculus]
          Length = 417

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 218 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 270

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 271 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 323

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 324 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 375

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 376 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 413


>gi|88801521|ref|ZP_01117049.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Polaribacter
           irgensii 23-P]
 gi|88782179|gb|EAR13356.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Polaribacter
           irgensii 23-P]
          Length = 381

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 22/191 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+   ++      K         P      E             F  E
Sbjct: 179 YIAIEGNIGAGKTSLSKMMSDAFNAKLVLERFADNPFLPKFYE-------DKERYAFPLE 231

Query: 66  AEAIVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122
                F A R     +++ +  L +  I + D ++  S  +      +    L       
Sbjct: 232 MS---FLADRYHQLSDDLAQFDLFKNFI-ISDYYIFKSLIFAQVTLPADEYLLYRKMFNL 287

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I  +   PD  + L    D  L+ ++ R    E               EK  + +     
Sbjct: 288 IYKEIPKPDLYVYLYQNTDRLLENIKKRGRTYEQNI-------TPEYLEKIHEGYKGFIN 340

Query: 183 NQPD-RCHIVD 192
           +Q D    I+D
Sbjct: 341 SQDDLNLLIID 351


>gi|148708065|gb|EDL40012.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform
           CRA_b [Mus musculus]
          Length = 367

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55
           I+ +G   +GK      + + L              T    G P       + +      
Sbjct: 60  ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 119

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109
               ++  +        A+RL    + +   L  G+ ++ +R + S + +      QG  
Sbjct: 120 DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 179

Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                   + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 180 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 226


>gi|148708069|gb|EDL40016.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform
           CRA_f [Mus musculus]
          Length = 345

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55
           I+ +G   +GK      + + L              T    G P       + +      
Sbjct: 50  ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 109

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109
               ++  +        A+RL    + +   L  G+ ++ +R + S + +      QG  
Sbjct: 110 DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 169

Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                   + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 170 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 216


>gi|26337977|dbj|BAC32674.1| unnamed protein product [Mus musculus]
          Length = 330

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55
           I+ +G   +GK      + + L              T    G P       + +      
Sbjct: 35  ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 94

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109
               ++  +        A+RL    + +   L  G+ ++ +R + S + +      QG  
Sbjct: 95  DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 154

Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                   + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 155 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 201


>gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus
           kodakarensis KOD1]
 gi|73919452|sp|Q5JJC8|SRP54_PYRKO RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus
           kodakarensis KOD1]
          Length = 448

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 15/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAI 69
           GI+G+GKTT ++ L R+LQ++ Y V V       P A      LL   G++ FG   E  
Sbjct: 107 GIQGSGKTTSVAKLARYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEE-- 164

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 +      +     +G  ++    +DS       R   +   ++ +++I  + + 
Sbjct: 165 ---KDAVKLAREGVEHFREKGVDVII---VDS-----AGRHKEEKGLIEEMRQI-SEAIK 212

Query: 130 PDCTII 135
           P   I+
Sbjct: 213 PHEVIL 218


>gi|239626492|ref|ZP_04669523.1| YqaC [Clostridiales bacterium 1_7_47_FAA]
 gi|239516638|gb|EEQ56504.1| YqaC [Clostridiales bacterium 1_7_47FAA]
          Length = 174

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 60/221 (27%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G+ +   G+ G GK+T   +L   L     D          P        L S    
Sbjct: 1   MGTGIIVC--GLNGTGKSTLGKVLVERLNFHFIDSESLYFLTADP--------LYSYAYP 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               EA  ++F         N I+              +  ++ +   +      +L   
Sbjct: 51  RTHEEAAKLLF---------NEIK--------------MYENFVFASVK-GDYGEWLYPC 86

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFERKDVMIHEKRRQI 176
            + +         +++D+P D+ ++RV+NR   +    +    D +E++    H + +  
Sbjct: 87  FQYA---------VLIDVPRDVRIQRVKNRSFQKFGNRMLPGGDLYEQEKNFFH-RVQ-- 134

Query: 177 FLDIARNQPDRC--------HIVDSAHSFQSVATNILNIVW 209
               A N  +            VD   S       I+  + 
Sbjct: 135 --SRAENDVEEWLQSLSCPVIRVDGTKSIGENTNLIMEQIR 173


>gi|294790602|ref|ZP_06755760.1| deoxyadenosine kinase [Scardovia inopinata F0304]
 gi|294458499|gb|EFG26852.1| deoxyadenosine kinase [Scardovia inopinata F0304]
          Length = 242

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 24/162 (14%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VF 71
           AGK+T   +L   L       +     +    P       ++     +     A  + VF
Sbjct: 14  AGKSTLTQILSDEL---GTKAYFEPVEDNPVLPLFYKGNQLVEEGKAET-NPYAFLLQVF 69

Query: 72  AAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHLFLDSL 120
              R   +   I+ A+ E   +L DR  + DS +         A Q E    + L  + L
Sbjct: 70  FLNRRFAM---IKQAMQEDNNIL-DRSIYEDSIFMKMNTDQGHATQEEWKIYKALLDNML 125

Query: 121 QEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +E+  + ++  PD  I LD+ ++  L R++ R    E    D
Sbjct: 126 EELPYAAKKKSPDLMIFLDVNLETMLSRIKIRGREYEQVESD 167


>gi|149037563|gb|EDL91994.1| rCG55630, isoform CRA_a [Rattus norvegicus]
          Length = 335

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 20/168 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58
           I+ +G   +GK      +   L  K+Y     +    T        +  S          
Sbjct: 60  ITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYD 119

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108
                D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      QG 
Sbjct: 120 NPKSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGF 178

Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                    + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 179 IRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 226


>gi|187918111|ref|YP_001883674.1| deoxyguanosine kinase [Borrelia hermsii DAH]
 gi|119860959|gb|AAX16754.1| deoxyguanosine kinase [Borrelia hermsii DAH]
          Length = 205

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 21/171 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + L I  EG+ GAGKTT   +L +       ++    E                    
Sbjct: 1   MEAILVIVIEGLIGAGKTTLGHVLSKEF-----NIPFYSELNNEFTLFMLDKFYKDKSRW 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ------- 113
            F  +   I F   R   ++ + +    +G   + DR +     +    + S        
Sbjct: 56  AFSVQ---INFLNERFKLIKAIFK---TKGG--ILDRSIYGDRVFASLLNESGYISNAEC 107

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163
            ++ D L  +      P   I LD  VD   +R++NR    E+    +Y E
Sbjct: 108 RIYFDLLDNMLEHSQRPVLMIYLDCSVDEAERRIKNRNRSFETGIPREYLE 158


>gi|148705023|gb|EDL36970.1| thymidylate kinase family LPS-inducible member, isoform CRA_a [Mus
           musculus]
          Length = 394

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  I+ EG++  GKTT    +   L+     V +   P   P     R +      
Sbjct: 195 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 247

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118
               A      +  A     E+   P       ++ DR+  S+  Y    + S  L +L 
Sbjct: 248 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 300

Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161
                  Q   P D          T    +  +  ++R+Q R           E+  +  
Sbjct: 301 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 352

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +K    +  +    P  CH+VD++ S ++V   +L ++ 
Sbjct: 353 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 390


>gi|261416815|ref|YP_003250498.1| deoxynucleoside kinase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373271|gb|ACX76016.1| deoxynucleoside kinase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 216

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 14/155 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EG+ G GKT+    +         + +    P      E             +  +
Sbjct: 9   FMAIEGVIGVGKTSLCRAISERWNAMFIEENFAENPFLPKFYE---------NRAAYAFQ 59

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
            + + F   R   ++N    + +   +L+ D +    D  +A Q   ++   ++      
Sbjct: 60  TQ-LFFLLDRFKQLQNSALQSDLFHDLLVSD-YTFDKDRIFASQNLTENEMTMYDQVSNA 117

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +      PD  + L   V   L+R++ R    E +
Sbjct: 118 LVHDIRKPDYVVYLQASVSTLLQRIRGRGRAMEKS 152


>gi|125624153|ref|YP_001032636.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris MG1363]
 gi|24935317|gb|AAN64310.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124492961|emb|CAL97924.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070929|gb|ADJ60329.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 212

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 51/233 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++    L   L+               P  +                + 
Sbjct: 2   IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117
            A +     L+     I+ A  +   +L DR +       +  Y+    +   L +    
Sbjct: 48  YAFLLQIYFLNKRFESIKMAYRQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106

Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             + L+E+  + +  PD  + +D+  +  L R+  R           FE+  +   E  +
Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156

Query: 175 QIFLDIARNQPDRCH--------IVDSAHSFQSV-----ATNILNIVWELVQK 214
             +  +    PD            +D   S   V        +L  + + ++K
Sbjct: 157 DYYAQVHNEYPDWYKNYDISPKLRIDGD-SIDFVNNPEHLDEVLGQIDDELKK 208


>gi|329914131|ref|ZP_08276064.1| Deoxyadenosine kinase [Oxalobacteraceae bacterium IMCC9480]
 gi|327545197|gb|EGF30468.1| Deoxyadenosine kinase [Oxalobacteraceae bacterium IMCC9480]
          Length = 213

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 15/155 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G GK++    L      +     +   P   P  E           + +   
Sbjct: 8   YIVVEGPIGVGKSSLAQKLGENFGAQ----LLLERPEENPFLERFYR-----DAERYALP 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + + F   R++ + ++ +       ++   L D   D  +A     D   +L+      
Sbjct: 59  TQ-MFFLFQRMNQLRDLAQTDFFNASLVSDFLID--KDPLFARLTLGDDELNLYQQMYDN 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +  Q  +PD  I L       ++RV+ R    E+ 
Sbjct: 116 LHPQAPVPDLVIYLQAEPATLIERVRKRGVTVEAG 150


>gi|114556433|ref|XP_001163790.1| PREDICTED: cytidylate kinase isoform 1 [Pan troglodytes]
          Length = 228

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 55/211 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + EGKI+       L  R +D + A   +R+           D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQRNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I ++R   R      +  +    + +   EKR Q 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVA 201
           +L   +       +  +   +D++ S   V+
Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVS 217


>gi|13195624|ref|NP_077159.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial precursor [Mus musculus]
 gi|32363386|sp|Q99LC3|NDUAA_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|13097393|gb|AAH03439.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 [Mus
           musculus]
 gi|74219344|dbj|BAE26801.1| unnamed protein product [Mus musculus]
 gi|148708068|gb|EDL40015.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform
           CRA_e [Mus musculus]
          Length = 355

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55
           I+ +G   +GK      + + L              T    G P       + +      
Sbjct: 60  ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 119

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109
               ++  +        A+RL    + +   L  G+ ++ +R + S + +      QG  
Sbjct: 120 DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 179

Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                   + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 180 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 226


>gi|296196368|ref|XP_002745789.1| PREDICTED: deoxycytidine kinase-like [Callithrix jacchus]
          Length = 260

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 40/240 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREP------GGTPAAEAAR 51
           IS EG   AGK+T +++LK+  +          +  +VH T++                +
Sbjct: 24  ISIEGNIAAGKSTFVNILKKVCEDWEVVPEPVARWCNVHSTQDEFEELTTSQKNGGNVLQ 83

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAY 105
            +        F  +  A + +  R         +++  +P L   + +  DR++ +S  Y
Sbjct: 84  MMYEKPERWSFTFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLY 142

Query: 106 QGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CL 159
           + E  +     +     D       Q +  D  I L    +  L R+  R    E    L
Sbjct: 143 ESECMNETEWTIYQDWHDWTNNQFGQSLELDGIIYLRATPEKCLHRMYLRGRNEEQGIPL 202

Query: 160 DYFER-----KDVMIHE--KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +Y E+     +  ++H   K    +L   +  P     +D    F+    +++  V E +
Sbjct: 203 EYLEKLHHKHESWLLHRTLKTNFNYL---QEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|256965119|ref|ZP_05569290.1| shikimate kinase [Enterococcus faecalis HIP11704]
 gi|307273219|ref|ZP_07554465.1| shikimate kinase [Enterococcus faecalis TX0855]
 gi|256955615|gb|EEU72247.1| shikimate kinase [Enterococcus faecalis HIP11704]
 gi|306510204|gb|EFM79228.1| shikimate kinase [Enterococcus faecalis TX0855]
          Length = 168

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR+      +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIAEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIIHEILQQLKE 168


>gi|254173493|ref|ZP_04880165.1| shikimate kinase [Thermococcus sp. AM4]
 gi|214032185|gb|EEB73015.1| shikimate kinase [Thermococcus sp. AM4]
          Length = 177

 Score = 50.4 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 71/214 (33%), Gaps = 55/214 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G GKTT   LL + L    Y+    R+        A    +     DE   
Sbjct: 1   MIIAVTGTPGVGKTTVSKLLAQKL---GYEYVSLRDY-------AMEKGIGEMKGDELEV 50

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E + + +   R             +GK ++ D  L                         
Sbjct: 51  EVDELAYNFERD-----------FKGKNVVVDGHL------------------------- 74

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              +  D  ++L     +  +R+  R   RE    +  E + V +        L  A  +
Sbjct: 75  SHFLNADLVVVLRAHPRLIGERLTERGYSREKVGEN-VEAELVDVI-------LVEALEE 126

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
            +    VD+   + + V   IL ++ + V++RVS
Sbjct: 127 NENVVEVDTTGKTPEEVVNEILELIEKGVRRRVS 160


>gi|148508292|gb|ABQ76076.1| signal recognition particle receptor SRalpha [uncultured
           haloarchaeon]
          Length = 413

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 19/156 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAE 65
           I F G+ G GKTT I+ L ++L+ +   V +         A E  R             +
Sbjct: 216 IVFTGVNGVGKTTSIAKLVQYLESRGLSVVMANGDTYRAGANEQIRE-----HAKTLDTK 270

Query: 66  AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A          + + +  A      ++L D            R  + +  +  L++I 
Sbjct: 271 LIAHEQGGDPAAVLYDAVEYAEANDIDVVLGD---------TAGRLHTSNDLMAQLEKID 321

Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158
            + V PD T+ +D  +     ++R +      E   
Sbjct: 322 -RVVNPDMTLFVDEAVAGQDAVERAKQFNEAAEIDG 356


>gi|195376367|ref|XP_002046968.1| GJ12193 [Drosophila virilis]
 gi|194154126|gb|EDW69310.1| GJ12193 [Drosophila virilis]
          Length = 225

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 74/215 (34%), Gaps = 42/215 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCGVDEFGA 64
           G  G GK T  + +     +  +       + RE    G+      + ++ S G      
Sbjct: 36  GGPGCGKGTQCAKIVE---KYGFTHLSSGDLLREEVASGSDKGRQLQEIMTSGG---LVP 89

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AE +    A +   +   +  L++G                  R+ +Q +  +      
Sbjct: 90  NAEVLSLLNAAVTRTKGSSKGFLIDGY----------------PREKNQGIEFEQ----- 128

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEKRRQIFLDI 180
             ++ P D  +  D   D  LKR+  R +  E    D  E   R  +   ++     L++
Sbjct: 129 --KIAPADLALYFDCSEDTMLKRILARANAAEVKRADDNEETIRSRLQTFKRNTSAILEL 186

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                ++   +++      +   ++ ++  ++QK+
Sbjct: 187 ---YAEKTLTINAERDVDDIFMEVVEVIDCVLQKK 218


>gi|167537263|ref|XP_001750301.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771291|gb|EDQ84960.1| predicted protein [Monosiga brevicollis MX1]
          Length = 581

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 48/210 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  G+GK+T  + L   +          R       ++  R  +L    +     +
Sbjct: 410 VVIAGNSGSGKSTVAAELAGSI-GSGIGAIHVR-------SDIVRKRMLGVSSE--TRLS 459

Query: 67  EAIVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +A    +AR      ++  A   +  G  ++ D            +D+ Q  F++ L+  
Sbjct: 460 DAHYVESARRQCYAALVELANNLIAVGCGVVLD---------ATFQDTWQREFINDLRGA 510

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDI- 180
                 P   I LD+P    L+R++ R S R+++ ++   FE+             L + 
Sbjct: 511 ------PVKCIWLDVPRATLLERIRLRDSGRDASDMNASKFEK-------------LTLP 551

Query: 181 --ARNQPDRCHIVDSAHSFQSVATNILNIV 208
               + P     +D   +  +VA  +LN V
Sbjct: 552 PPPTSAP--WVHIDGVGAVANVAERVLNAV 579


>gi|193216709|ref|YP_001999951.1| deoxyguanosine kinase [Mycoplasma arthritidis 158L3-1]
 gi|193002032|gb|ACF07247.1| deoxyguanosine kinase [Mycoplasma arthritidis 158L3-1]
          Length = 218

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 31/219 (14%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           GI G   AGK+     L +  +          E          + +         G ++ 
Sbjct: 4   GISGMIAAGKSQLSDKLYKHYEDSVM--LHEFEENDEVFNTFLKWLYEKQPNLTIGFQSY 61

Query: 68  AIVFAAARLDHVENVIRPALMEGK-----ILLCDRFLDSSYAYQGERDSSQHLFLDSL-- 120
                         V +    E K      +  DRF  S   Y   +          L  
Sbjct: 62  I---VENHSAKFAEVFKKYQSENKDPQKSHIFLDRF--SVEHYIFAKLILNEKEPKYLKA 116

Query: 121 -----QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                + +  +E +PD  I LD+  +    R+  R    E A  D     +    +    
Sbjct: 117 YDALFETLITKEELPDFAIFLDISFETFKNRILKRGRESEIANFD----DNFAYFKNLHD 172

Query: 176 IFL----DIARNQPDRCHIVDSA-HSFQSVATNILNIVW 209
            +L    +IA     +  I+D+   +   V    + I+ 
Sbjct: 173 NYLKIFKEIAEKFKLKYFIIDTNDKTETEVFHEAVKIIE 211


>gi|229091546|ref|ZP_04222755.1| uridine kinase [Bacillus cereus Rock3-42]
 gi|228691840|gb|EEL45588.1| uridine kinase [Bacillus cereus Rock3-42]
          Length = 187

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 72/222 (32%), Gaps = 55/222 (24%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           MN     I+   + G GKTT    L   L   +   +D +   E   T   +        
Sbjct: 2   MNKKTKIITIAAVSGGGKTTVTERLTEKLTNSKALYFDSYH-FENCPTDICKWI------ 54

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              +        +      + H+   IR + ++  I+      D  +AY           
Sbjct: 55  --DEGANYNEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 92

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R   R         DY E     IH      
Sbjct: 93  ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DYKEDTMSEIHNDLKHY 138

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
               R+ +L+     +P+   ++D + S   +   I   ++ 
Sbjct: 139 ITYARKAYLEALHTVKPNSDIVLDGSLSVDEIINQIEEELYR 180


>gi|256619069|ref|ZP_05475915.1| shikimate kinase [Enterococcus faecalis ATCC 4200]
 gi|256598596|gb|EEU17772.1| shikimate kinase [Enterococcus faecalis ATCC 4200]
          Length = 168

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGCSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR++     +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIIHEILQQLKE 168


>gi|195445704|ref|XP_002070447.1| GK12063 [Drosophila willistoni]
 gi|194166532|gb|EDW81433.1| GK12063 [Drosophila willistoni]
          Length = 253

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 88/248 (35%), Gaps = 56/248 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64
            EG  G+GKTT ++       +   +V +  EP          ++L              
Sbjct: 26  IEGNIGSGKTTFLN----HFDKYRDEVCLLTEPVEKWRNVNGVNLLELMYKEPKKWAMPF 81

Query: 65  EAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHLFL-DS 119
           ++   +    A     +  ++         + +R + S+   +     R+ S    + ++
Sbjct: 82  QSYVTLTMLQAHTQITDKKLK---------IMERSIYSARYCFVENMFRNGSLEQGMYNT 132

Query: 120 LQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER------KDVM 168
           LQE          V  D  I L    ++  +R++ R    ES     + +      +D +
Sbjct: 133 LQEWYKFIEQSIHVQADLIIYLRTSPEVVYERMRQRARSEESCIPLKYLQELHESHEDWL 192

Query: 169 IHEKRRQIFLDIARNQPDRCH--IVDSAHSFQSVATN-------ILNIVWELVQKRVSPL 219
           IH++R           P  C   ++D+  + +++ +        I + +    Q + SP+
Sbjct: 193 IHQRR-----------PQTCKVLVLDADLNLENILSEYQRSETSIFDAISGAHQHQPSPV 241

Query: 220 ---SSKKD 224
               SK++
Sbjct: 242 LVSPSKRE 249


>gi|256961921|ref|ZP_05566092.1| shikimate kinase [Enterococcus faecalis Merz96]
 gi|293382989|ref|ZP_06628907.1| shikimate kinase [Enterococcus faecalis R712]
 gi|293389522|ref|ZP_06633979.1| shikimate kinase [Enterococcus faecalis S613]
 gi|312907540|ref|ZP_07766531.1| shikimate kinase [Enterococcus faecalis DAPTO 512]
 gi|312910158|ref|ZP_07769005.1| shikimate kinase [Enterococcus faecalis DAPTO 516]
 gi|256952417|gb|EEU69049.1| shikimate kinase [Enterococcus faecalis Merz96]
 gi|291079654|gb|EFE17018.1| shikimate kinase [Enterococcus faecalis R712]
 gi|291081139|gb|EFE18102.1| shikimate kinase [Enterococcus faecalis S613]
 gi|310626568|gb|EFQ09851.1| shikimate kinase [Enterococcus faecalis DAPTO 512]
 gi|311289431|gb|EFQ67987.1| shikimate kinase [Enterococcus faecalis DAPTO 516]
          Length = 168

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR++     +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIKEDTENQRPLAIERSPKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIIHEILQQLKE 168


>gi|260790957|ref|XP_002590507.1| hypothetical protein BRAFLDRAFT_124506 [Branchiostoma floridae]
 gi|229275701|gb|EEN46518.1| hypothetical protein BRAFLDRAFT_124506 [Branchiostoma floridae]
          Length = 249

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 24/181 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ EG  G+GKTT    L  F + K  +V   +EP          + L    +     + 
Sbjct: 42  VAIEGNIGSGKTT---FLDHFAKTKGIEVI--QEPVDMWRNVRGHNTL---ALMYSDPKR 93

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY------AYQGERDSSQHLFL--D 118
            +  F +  +      I     +  I + +R + S+        ++    +     +  +
Sbjct: 94  WSFAFQSY-VQLTMLDIHTRQQKALIRMMERSIYSAKYCFVENMHESGNMTDAEYVVLTE 152

Query: 119 SLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-----KDVMIHE 171
               I + Q+V  D  + L    ++  +R++ R    E A  +DY +      +D + H+
Sbjct: 153 WFNWILANQKVQIDLIVYLKTSPEVCHQRIKQRCREEEKAIPMDYLQALHNAHEDWLTHK 212

Query: 172 K 172
           K
Sbjct: 213 K 213


>gi|313678154|ref|YP_004055894.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45]
 gi|312950426|gb|ADR25021.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45]
          Length = 220

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 70/223 (31%), Gaps = 32/223 (14%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60
           + I   GI G   +GK+T  S L +  +     + +      +         L     + 
Sbjct: 1   MLI---GISGMISSGKSTLTSKLHKHFKT---SLMLKEYAEDSEVFNTFLKWLYEKQPNL 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK-----ILLCDRFLDSSYAYQGER-DSSQH 114
             G ++            +  +I     + K      +  DRF    Y +          
Sbjct: 55  TIGFQSYV---VENHTTKLGELISEFNQQNKDWHTDHIFLDRFSIEHYIFANVNLRPKGQ 111

Query: 115 LFLDSLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            +LD    +    +     PD  I LD+  +  LKR+  R    E   +D F   +    
Sbjct: 112 NYLDGYDALFTHLITKDETPDIAIYLDMSWETFLKRIFERGRQVE---IDNF-YANEEYF 167

Query: 171 EKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208
           +    ++ D+    A        I+++   +   V    L I+
Sbjct: 168 KTLYNLYKDLFIKQAEKFNLEYKIIETDNLNEDEVFEKALEII 210


>gi|222147901|ref|YP_002548858.1| hypothetical protein Avi_1197 [Agrobacterium vitis S4]
 gi|221734889|gb|ACM35852.1| Conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 177

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 68/208 (32%), Gaps = 43/208 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEF 62
           I  EG+ G GKT+    +   LQR+ Y V    RE    G     E      L+ G+   
Sbjct: 6   ILIEGVSGTGKTS----VATELQRRGYHVIHGDRELAYQGDPATGEPLDASALAQGILHV 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                          H+ N+ +      K L+ D     S+   G R+  + + L     
Sbjct: 62  T---------FGHRHHLWNIDKV-----KALITDHSHPISFFCGGSRNFHRFIELF---- 103

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                   D   +LD+       R+ +R              ++  +  +      DI  
Sbjct: 104 --------DGVFVLDVDQHTLKNRLVSRPEDEFGGKP-----EERDLIMRLHATKEDI-- 148

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210
             P    ++D+    ++V   IL  + E
Sbjct: 149 --PGNAMVIDATVPVEAVVEAILLGIEE 174


>gi|50365364|ref|YP_053789.1| deoxynucleoside kinase [Mesoplasma florum L1]
 gi|50363920|gb|AAT75905.1| deoxynucleoside kinase [Mesoplasma florum L1]
          Length = 206

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 74/220 (33%), Gaps = 31/220 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK++    L   L  + +   +   P      +  +       +    A +
Sbjct: 3   IAIFGTVGAGKSSISQELSERLNYEIFPEPIDENPYFEDYYKDIKAYAFRMQIFMLTARS 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + +  A      ++N I       + ++ D  F++  +      D+    + D  Q +  
Sbjct: 63  KQLFAAKD----LKNKIF-----DRTIIEDPIFMNVGHKMGNVNDTDYKTYCDFFQYVVS 113

Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +  P      D  + L +  +  ++R+  R    E +        D    +   + + 
Sbjct: 114 ENLRYPNDRLKFDLVVYLKVSDETSIRRINERGRAAELSI-------DKNYWKILNESYE 166

Query: 179 DIARNQPD--RCHIVDSAHS-----FQSVATNILNIVWEL 211
           +  +   +     ++D+ +       + V  NI  I  E 
Sbjct: 167 EYYQEHKNDFPFLVIDANNDNLNEKVEEVIRNIEKIKKEF 206


>gi|212223710|ref|YP_002306946.1| putative kinase [Thermococcus onnurineus NA1]
 gi|229487551|sp|B6YUL3|KAD6_THEON RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|212008667|gb|ACJ16049.1| Hypothetical nucleotide kinase [Thermococcus onnurineus NA1]
          Length = 180

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 68/214 (31%), Gaps = 55/214 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + IS  G  GAGKTT   LL   L    Y+    +E   +               +    
Sbjct: 1   MIISVSGTPGAGKTTVSKLLSERL---GYEYVSVKELALSRGIG-----------ERVSD 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  V   AR+  V          G+ ++ D                       L    
Sbjct: 47  EIEIDVDELARV--VREEF-----SGRNVVLDGH---------------------LSHFV 78

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                 D  IIL     +  +R++ R   ++    +  E + V +        L  A  +
Sbjct: 79  PA----DVVIILRAHPRLIAERLKARGYSKKKLAEN-VEAELVDVI-------LVEALEE 126

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
            +R   VD+   S + V   IL ++    +KRV 
Sbjct: 127 NERVLEVDTTGKSPEEVVEEILTLLKSGTKKRVG 160


>gi|291166103|gb|EFE28149.1| guanylate kinase [Filifactor alocis ATCC 35896]
          Length = 212

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 52/174 (29%), Gaps = 36/174 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  G+GK T         ++    +   TR P            +     +
Sbjct: 3   KKGLLIVLSGPSGSGKGTICKRFLEKNEKVGLSISATTRAPRDGEVDGTHYFFIDKPKFE 62

Query: 61  EFGAEAEAIVFAAARLDHV--------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           E   + E + +      HV        +  +   +  G  ++                  
Sbjct: 63  EMIEKQELLEYV-----HVFDNYYGTPKKYVEDKIESGDDVI------------------ 99

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER 164
             L ++    ++++   PD  +I  LP   +   +R+ +R +          +R
Sbjct: 100 --LEIEIEGAMNIKASYPDAVLIFVLPPTIEELKRRICSRGTETMEQIDKRLDR 151


>gi|222081966|ref|YP_002541331.1| hypothetical protein Arad_8469 [Agrobacterium radiobacter K84]
 gi|221726645|gb|ACM29734.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 176

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 53/212 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EGI G GKT+    +   LQ++ Y V               R +       +       
Sbjct: 8   IEGISGTGKTS----VATELQQRGYHVIH-----------GDREL-----AYQGDPRTGV 47

Query: 69  IVFAAARLDHVENVI----RPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            + ++A+  ++ +V            K+  L+ DR    + ++      + H F+D    
Sbjct: 48  PLDSSAQRQNIPDVAFGHEHHIWDVDKVKSLVADRSH--AISFFCGGSRNFHHFIDLF-- 103

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-A 181
                   D   +LD+ +D   +R+ +R         D F  K        R + L + A
Sbjct: 104 --------DGVFVLDVDLDTLKRRLASRPE-------DEFGGKPAE-----RDVVLRLHA 143

Query: 182 RNQ--PDRCHIVDSAHSFQSVATNILNIVWEL 211
             +  P+    +D+A    SV  +IL+   E+
Sbjct: 144 TQEDIPNNATTIDAAAPLASVVDDILSKCGEI 175


>gi|148377285|ref|YP_001256161.1| deoxyguanosine kinase [Mycoplasma agalactiae PG2]
 gi|148291331|emb|CAL58714.1| Deoxyguanosine kinase [Mycoplasma agalactiae PG2]
          Length = 220

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 69/225 (30%), Gaps = 36/225 (16%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQ--------RKNYDVHVTREPGGTPAAEAARHV 53
           + I   GI G   +GK+T  + L +            ++ +V  T         E   ++
Sbjct: 1   MLI---GISGMISSGKSTLTAKLHKHFNTSLMLKEYDEDSEVFNTF---LKWLYEKQPNL 54

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSS 112
            +             +       + +    +        +  DRF    Y +        
Sbjct: 55  TIGFQSYVVENHTTKLSELIDEFNKLNKNWQT-----DHIFLDRFSIEHYIFANVNLRPK 109

Query: 113 QHLFLDSLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
              +LD    +    +     PD  I LD+  +  LKR+  R    E   +D F   +  
Sbjct: 110 GQNYLDGYDALFTHLITKDETPDIAIYLDMSWETFLKRIFERGRQVE---IDNF-YANEE 165

Query: 169 IHEKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208
             +    ++ D+    A        I+++   +   V    L I+
Sbjct: 166 YFKTLYNLYKDLFIKQAEKFKLEYKIIETDNLTEDEVFEKALEII 210


>gi|225712984|gb|ACO12338.1| UMP-CMP kinase [Lepeophtheirus salmonis]
          Length = 194

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 65/211 (30%), Gaps = 40/211 (18%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    +        L   +       +PG +   E   H +++  +      
Sbjct: 11  GGPGAGKGTQCEKIVEKYGFVHLSAGDLQRAERAKPG-SEYGELIEHHIVNGTIVP---- 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 AA      +N I  +    K L+ D F             +   +  S+  I  
Sbjct: 66  ------AAITCALPKNAIVNSTTSKKFLI-DGF--------PRNQGNVEEWKKSVGPIVN 110

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD------ 179
              +    +  D   D  ++R  +R +       D  E       +KR   +L+      
Sbjct: 111 FRFL----LFFDCDEDTCVQRCLSRGAAGSGRSDDNIES-----LKKRCATYLNSTLGVI 161

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +  +  R   +D+  S   V  ++  I  E
Sbjct: 162 QSYEKEQRVKRIDATRSVDEVFEDVQKIFSE 192


>gi|209520584|ref|ZP_03269339.1| deoxynucleoside kinase [Burkholderia sp. H160]
 gi|209498977|gb|EDZ99077.1| deoxynucleoside kinase [Burkholderia sp. H160]
          Length = 226

 Score = 50.0 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 53/161 (32%), Gaps = 17/161 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGA 64
           +I+ EG  G GKT+    L +          +   P   P  E   R  +      +   
Sbjct: 19  YIAIEGPIGVGKTSLARRLAQRWSMH----ELFERPQDNPFLERFYRDTVRYALPVQLH- 73

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
                 FA  R    + V   A   G  L+ D F+   +  +A    +D    L+     
Sbjct: 74  ------FALRRAQQAQEV-SAAQAGGTPLIAD-FITQRNDIFARLTLQDDEWQLYRALAA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 126 RLDVSASEPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166


>gi|108757889|ref|YP_630283.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622]
 gi|108461769|gb|ABF86954.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622]
          Length = 214

 Score = 50.0 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 15/155 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G GKT+  ++L   L  +     V   P  +                +F  
Sbjct: 4   RYIVVEGPIGVGKTSLSNILAERLAGRRILEVVEENPFLSSFY---------TDRQKFAF 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           + +     +      + + +  L     +  D +L   D  +A+         L+    +
Sbjct: 55  QTQIFFLLSRFRQQ-QELFQQDLFSSMTV-SD-YLFAKDRIFAHLNLDAHELALYERVFE 111

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
            +  +   PD  I L   +D+ L R++ R    E 
Sbjct: 112 ALGPRVAKPDLVIYLQARLDVLLHRIKKRGREFER 146


>gi|297625037|ref|YP_003706471.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093]
 gi|297166217|gb|ADI15928.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093]
          Length = 210

 Score = 50.0 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 34/231 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F++  G  GAGK++   LL            V   P         R             
Sbjct: 1   MFVAVAGNIGAGKSSLTRLLAEHYALAPIYEAVDENPYLEDFYRDMRRYAFHSQ------ 54

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ-----GERDSSQHLFL 117
               + F A RL+     + P    G  ++ DR  + D++   Q     G   +      
Sbjct: 55  ----MFFLAKRLEQHARHVNP----GDRVIQDRTIYEDAAVFAQNLFEEGVLGARDFGVY 106

Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            ++ E + Q +  PD  I L   +    + +  R    E    D +  +   ++E+    
Sbjct: 107 RAMYEAATQVLRPPDLLIYLRAELPTLRRHIALRGRRFELGIEDAYLERLSALYERWFAS 166

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQKRVSPLSSK 222
           +       P     V +      V        +L  +   + + V PL+++
Sbjct: 167 Y----TLSPKVVLEVGA---LDFVHRERDLQAVLARLAPWLAEPVLPLTAR 210


>gi|83319375|ref|YP_424567.1| nucleoside kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|83283261|gb|ABC01193.1| nucleoside kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
          Length = 205

 Score = 50.0 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 33/217 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T    + + L  + +   V   P      +  +  +    +    A +
Sbjct: 3   IAIFGTVGAGKSTISQEISKRLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 62

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + +     +  ++EN+I    L+E  I     F+  +Y          + +++    + +
Sbjct: 63  KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQIDYNTYIEFYNNVVL 113

Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +  P      D  I L +     + R++ R    E    D          E   + + 
Sbjct: 114 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEEPLIGD-------EYWETLNKNYE 166

Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  +      P    +VD+      V   I  I+ +L
Sbjct: 167 EFYKQNVYNFP--FFVVDAELD---VKAQIELIMNKL 198


>gi|254491972|ref|ZP_05105150.1| Deoxynucleoside kinase subfamily, putative [Methylophaga
           thiooxidans DMS010]
 gi|224462787|gb|EEF79058.1| Deoxynucleoside kinase subfamily, putative [Methylophaga
           thiooxydans DMS010]
          Length = 219

 Score = 50.0 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 33/195 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G GKT  +  L            +  +P   P  E      L         
Sbjct: 8   RYIVVEGPIGVGKTHLVKRLAESFAG----TILLEQPEQNPFLE---KFYLYPKQSALPT 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +   + F   R+   + + +  L      + D F+   D  +A Q   D  +    + + 
Sbjct: 61  Q---LSFLMQRVKLGKTLNQDDLFNDLH-IAD-FMVEKDKLFA-QISLDDDELALYNMVY 114

Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL-D 179
           + +++    PD  I L   + +   R+  R                +   +   + +L  
Sbjct: 115 DNLTLHHRTPDLVIYLQASLPVLKSRISQR---------------GIGYEQHVEEGYLKR 159

Query: 180 IARNQPDRCHIVDSA 194
           +A    D  H  D++
Sbjct: 160 LADTYADFFHYYDAS 174


>gi|157364898|ref|YP_001471665.1| deoxynucleoside kinase [Thermotoga lettingae TMO]
 gi|157315502|gb|ABV34601.1| deoxynucleoside kinase [Thermotoga lettingae TMO]
          Length = 220

 Score = 50.0 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 23/213 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  GAGKTT I+ +   L  +        E   +   +   +  +     ++G + 
Sbjct: 5   IIVEGTVGAGKTTFINYISERLCLEPI-----YELTDSKLIQILENFYIDPS--KWGFQL 57

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-EISV 125
           +                +  ++  + + CD    S    +GE    ++     L   +  
Sbjct: 58  QIYFLTKRFKQMKIGCEKGNVVMDRSIFCDHIFPSVLLKRGEMTKLEYDIYKELHSNLIE 117

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFE---RKDVMIHEKRRQIFLDIA 181
               P+  I L       + R++ R  L E S   +Y+E   R+              ++
Sbjct: 118 FSTPPELMIYLKCSTKTAIDRIKKRGRLWELSIDENYWEILNREYEDFF-----GQYSLS 172

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                   I++   S     +NI+ IV E+ ++
Sbjct: 173 SL-----LIIN-TDSVDERFSNIVQIVEEIFRE 199


>gi|56418247|gb|AAV91061.1| deoxyribonucleoside kinase/thymidine kinase [Grouper iridovirus]
          Length = 191

 Score = 50.0 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 50/224 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     IS  G  GAGK++ ++ L     ++ Y     +    T         L      
Sbjct: 1   MALPFLISVSGNIGAGKSSLLAALA----KRGY---YVQPEDFTKWGPLFNLALADPKRY 53

Query: 61  EFGAEAEAIVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSSY-----AY-QGERDSSQ 113
           +F ++ + ++     + +H  N  RP      +++ +R  D        AY  G     +
Sbjct: 54  KFSSQLKILMVQMDLQREH-RNGTRP------LVILERASDCVLGFGKVAYDMGLMHMEE 106

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +  L+ +   +  +   D  I+LD P D+   R+ NR         D          +  
Sbjct: 107 YRMLEDIH--AKLDAKVDLKILLDTPPDVCRVRIGNR---------DR------EFEQAI 149

Query: 174 RQIFLDIARNQPDRCHIVDSAH-------SFQSVATNILNIVWE 210
              +L     Q      +D+A          + V  N + ++ +
Sbjct: 150 SNEYLTALHAQ-----FIDAADVKLSGLPPKEEVVENFIKLLAQ 188


>gi|331215857|ref|XP_003320608.1| adenylate kinase isoenzyme 1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309299598|gb|EFP76189.1| adenylate kinase isoenzyme 1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 201

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 38/208 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  GAGK T  + L              +   +   G+      +  +    +       
Sbjct: 17  GGPGAGKGTQCARLVDQYSFVHLSAGDLLRAEQNRDGSTYGSMIKDYIREGKIVPMQVTI 76

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           + +          EN I  A+ +GK     RFL   +  Q ++       +         
Sbjct: 77  KLL----------ENAIGAAVAQGKT----RFLVDGFPRQMDQAVKFDEDVCQSS----- 117

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLDIA 181
                  + L  P +  LKR+  R   S RE    +  +++     E        +    
Sbjct: 118 -----FVLFLTCPEETLLKRLLERGKTSGREDDNEESIKKRFRTFIETSMPVVDYY---- 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
             Q  +   V+S    + V   I + + 
Sbjct: 169 -QQKQKVVKVNSDKPIEEVYKEIQDAIK 195


>gi|148377286|ref|YP_001256162.1| deoxyguanosine kinase [Mycoplasma agalactiae PG2]
 gi|148291332|emb|CAL58715.1| Deoxyguanosine kinase [Mycoplasma agalactiae PG2]
          Length = 217

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 15/220 (6%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
           + I   GI G   +GK+T +  L  +     Y    +   P              +  + 
Sbjct: 1   MII---GISGMISSGKSTLVKKLSNYYPNSAYIEEFSENDPVFNTFLRWCYEKQPNTDIA 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----LF 116
                 E++    +  +  E   +    +   +  DRF+   Y +     S +       
Sbjct: 58  FQSFLVESL--TDSFHEQKEKFQKTNSNQNGHMFLDRFILEHYIFAAATLSKKKNKYFEA 115

Query: 117 LDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            D L   I      PD  + +D+  +    R+  R    E    +  E     +H+  ++
Sbjct: 116 FDKLFSHIYDSNCNPDFALFIDINWETFKSRIFQRGRKVEIDNFNENEEYFKYLHKIYKE 175

Query: 176 IFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQK 214
            F+D+A        I+DS   S   V    ++ + + +++
Sbjct: 176 TFIDLAAKYNIPYEIIDSNDKSDTDVFIEAVSKIEKHIKE 215


>gi|145490088|ref|XP_001431045.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398147|emb|CAK63647.1| unnamed protein product [Paramecium tetraurelia]
          Length = 246

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 57/257 (22%)

Query: 1   MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC 57
           M+    I   EG  GAGK+T    L   L+++        EP              +L  
Sbjct: 1   MDKKFIIVSLEGNVGAGKST----LFEILRQEFPKAIFLMEPLEQWQNVHGNPNLNILEK 56

Query: 58  GVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKI--------------------LLC 95
              +           A  +RL   +  +R  + E K+                    +  
Sbjct: 57  YYSDIQRWGFTFQIYAYQSRLMAWDKQLRAVVKEQKLQQIDNQFSSPSTNADDEPILVFT 116

Query: 96  DRFLDSS------YAYQGERDSSQH-----LFLDSLQEISVQEVMPDCTIILDLPVDIGL 144
           +R ++S+        Y     +         F + L E   Q ++ DC I ++ P +  L
Sbjct: 117 ERSIESARELFFKLCYNDGTINELEYHIYEEFYEWLMEHYKQYLV-DCVIYVNTPPETCL 175

Query: 145 KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI--VDSAHS------ 196
           +R+  R    E+          +   +K  Q   D   +  ++  I  +D+  +      
Sbjct: 176 ERLTRRGRQEEACVP-------LDYLKKLHQRHEDWLSDNTNKFKIINIDATKNYVKDLD 228

Query: 197 -FQSVATNILNIVWELV 212
             ++V   +++ +  L+
Sbjct: 229 IKEAVRRQLIDEISTLI 245


>gi|124001051|ref|XP_001276946.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121918932|gb|EAY23698.1| hypothetical protein TVAG_120360 [Trichomonas vaginalis G3]
          Length = 209

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 46/188 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK+T   +L + L      +    E    P  E     L+   +     + 
Sbjct: 6   IVVTGPTGSGKSTQCRMLSQLLS-----IDYIHEYIDLPGGEEMLGKLIGGEISMINFQD 60

Query: 67  EAIVFAAARLDHVEN------VIRPALMEGKILLCD---------RFLDSSYAYQGERDS 111
             +   A   + +        VI     E  ++ CD         R + + Y   G    
Sbjct: 61  YVL---AKFDEQLAESKTDVFVIERLPEECSMIFCDGDETVLSKARAVQNKYGITGFAGD 117

Query: 112 SQHLFLDS--------LQEI-----SVQEVMP-D---------CTIILDLPVDIGLKRVQ 148
            + + +++        L EI       + V P D           I L    D+ ++R++
Sbjct: 118 MKVITINNYGQSPNAVLNEILGTIFGTKNVTPADVQHLANTSGVVIYLKSTPDLCMERMR 177

Query: 149 NRYSLRES 156
            R    E+
Sbjct: 178 KRGRGPEA 185


>gi|94264707|ref|ZP_01288488.1| hypothetical protein MldDRAFT_4798 [delta proteobacterium MLMS-1]
 gi|93454873|gb|EAT05120.1| hypothetical protein MldDRAFT_4798 [delta proteobacterium MLMS-1]
          Length = 502

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 66/220 (30%), Gaps = 43/220 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR-EPGGTPAAEAARHVLLSCGVDEFGAE 65
           I+  G +G GKTT    L     + +      R +    P     R VL           
Sbjct: 266 IAIVGNDGCGKTTVCEELVSICYKMDPVHINMRTDATVLPWTPTLRSVLKK--------L 317

Query: 66  AEAIVFAAARLDHVENVIRPALME--GKILLCDRF------LDSSYA------Y--QGER 109
           A   +F   R       +   L +   K +   RF       DS         Y     R
Sbjct: 318 ARVGLFRKNRFFKQAVGLLGELNDVFDKFV---RFRLGMAWADSGLGVTIFERYPTDRVR 374

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
               H  +     I     +PD  I LD+  +  LKR        +   +D  + K    
Sbjct: 375 GEFPHDIIKW-WPIEQFFPLPDGIIYLDVSPEDTLKRKS-----CDGHTVDEMKSK---- 424

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
               R  +L + R       + D+  S +   + +   +W
Sbjct: 425 ----RDNYLSLLREFSTAFKV-DNGMSKEETISVVKKHLW 459


>gi|215275162|sp|P0C8G0|KTHY_ASFM2 RecName: Full=Truncated thymidylate kinase
          Length = 208

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 25/173 (14%)

Query: 36  HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                P            +L     E  +E    +F   R +     I   L    I++ 
Sbjct: 4   IYMHFPNPDTVTGNLIFQVLD-KTVEMSSEQLHKLFTKHRSEFFTE-IAALLKLNFIVIV 61

Query: 96  DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           DR++ S  AY         + +++          PD T  L            N+    +
Sbjct: 62  DRYIWSGLAYAQA----DGITIET-----KDTFKPDYTFFL----------SSNKPLKEK 102

Query: 156 SACLDY-FERKDVMIHEKRRQIFLDIARNQP-DRCHIVDSAHSFQSVATNILN 206
              +   FE KD    E     F+ I  + P ++  I+ +  + + +   +L 
Sbjct: 103 PFNIQRLFEEKDK--QEIIFNNFITIMNDVPKNKFCIIPAHLNKEIIYNIVLT 153


>gi|167523034|ref|XP_001745854.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775655|gb|EDQ89278.1| predicted protein [Monosiga brevicollis MX1]
          Length = 306

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 32/220 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-GA 64
           F   EG++G GK+T    L          V     P       A    L     +    A
Sbjct: 92  FYVLEGMDGVGKSTATRGLAA---AGIRSVATPTMPW------AQHRALFDAQAEPLRRA 142

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--------GERDSSQHLF 116
              A  + A   + +     P L    +++ +R + S+ AY         G     +   
Sbjct: 143 FYFATNYLAVADETLMEDDDPGLKS-DVVVLERLVGSTVAYATAATAGARGPAMLPRPEA 201

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVM-----I 169
            +           P   I L +   + L R+Q+R +         +  E   ++      
Sbjct: 202 PEW--RWPADLPRPAGFIWLTVDPQVQLARLQDRAAALTPGETSTNADEEAKLLDAADPY 259

Query: 170 HEKRRQIFLDIARNQPDRCHIVD---SAHSFQSVATNILN 206
               ++ +        +    +D      S   + + +  
Sbjct: 260 QATLQEAYARFWAANSN-LPRLDLDTGTLSPDQIQSQVAA 298


>gi|38304046|gb|AAH61985.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 [Rattus
           norvegicus]
 gi|149037565|gb|EDL91996.1| rCG55630, isoform CRA_c [Rattus norvegicus]
          Length = 273

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERD 110
              D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      QG   
Sbjct: 40  KSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIR 98

Query: 111 SSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                  + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 99  KQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 144


>gi|225711266|gb|ACO11479.1| UMP-CMP kinase [Caligus rogercresseyi]
          Length = 193

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 35/209 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                        +A  +L +    +     E I 
Sbjct: 11  GGPGAGKGTQCAKIVEK---------------YGFVHLSAGDLLRAERQKKGSEYGELIE 55

Query: 71  FAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                   V   I  AL +  I+     RFL   +       S+   +  S+  +   + 
Sbjct: 56  HHIVNGTIVPPAITCALPKNAIVSSSKTRFLIDGF---PRNQSNVDEWETSVAPLVDFKF 112

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF----LDIARNQ 184
           +    +  D   ++ ++R  +R +       D  E       +KR   +    L + ++ 
Sbjct: 113 L----LFFDCKEEVCMERCLSRGAAGSGRSDDNLES-----LKKRIATYMNSTLGVIKSY 163

Query: 185 --PDRCHIVDSAHSFQSVATNILNIVWEL 211
              DR   VD++ +   V  +   I  E+
Sbjct: 164 ETKDRVKRVDASKTVDEVFNDAQKIFDEV 192


>gi|71896025|ref|NP_001026735.1| UMP-CMP kinase [Gallus gallus]
 gi|82197810|sp|Q5ZKE7|KCY_CHICK RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
 gi|53131155|emb|CAG31796.1| hypothetical protein RCJMB04_11f2 [Gallus gallus]
          Length = 196

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 62/216 (28%), Gaps = 53/216 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A +  R      G            
Sbjct: 10  GGPGAGKGTQCARIVEK-----------YGYTHLSAGDLLRDERKRPGS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EG+I+       L  R +D + A   Q  +          D+
Sbjct: 48  -------QYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRR 174
           LQ  +   +   D    +  D   +I + R   R      +  +    E++     +  R
Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTR 160

Query: 175 ---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
               ++  +      +   VD++ S   V   ++ I
Sbjct: 161 PIIDLYERM-----GKVRRVDASKSVDEVFEKVVQI 191


>gi|307299247|ref|ZP_07579048.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915043|gb|EFN45429.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 201

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 37/223 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I   G  GAGK+T  S +   L    +++H        P  E             + 
Sbjct: 2   GRIIVLAGNVGAGKSTIASAIAEGL---GFNIHYES-VSDNPFLE---DFYYDQKRWSYH 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS---SYAYQGER-----DSSQHL 115
            +   +        H    ++ A +    +  DR +      +A          D     
Sbjct: 55  LQTYFL-------YHRYCSLKSAEVNENTVF-DRSIYEDKEIFARNLFETGKMSDREFKA 106

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++     +      PD  + +D  VD  L R++ R    E+A         +   E+  +
Sbjct: 107 YVTMFDSMIKYLKKPDLLVYIDADVDTILARIRRRGRQMETAVP-------IAYWEQLDR 159

Query: 176 IFLDIARNQP-DRCHIVDSAHSFQSV-----ATNILNIVWELV 212
           ++    R+      + +D+  S   V     A  I   +  ++
Sbjct: 160 LYSSWIRDYDLSPIYKIDA-RSVDIVINPEKAQQITKEIMRIL 201


>gi|303388205|ref|XP_003072337.1| guanylate kinase [Encephalitozoon intestinalis ATCC 50506]
 gi|303301476|gb|ADM10977.1| guanylate kinase [Encephalitozoon intestinalis ATCC 50506]
          Length = 184

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 49/211 (23%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
              G  G+GK+T IS +        + V H TR+P            + +   +      
Sbjct: 7   VLTGPSGSGKSTIISHILSRFP-FGFSVSHTTRQPRKGEVNGKDYFFVTTEEFESMVKRQ 65

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E +             I+               + +Y Y    D  +      L ++   
Sbjct: 66  ELL-----------EYIK--------------YNGNY-YGTGSDQLKVSEKAILMDLEYD 99

Query: 127 EVM------PD-CTIILDLPVDIGLKRVQNRYS--LRESACLDYFERKDVMIHEKRRQIF 177
            VM      P+   + +D   D+  +R++ R     RE                K  + F
Sbjct: 100 GVMYCRKNYPNFVVVYIDCDKDVAYERLKKRMENKNREDEVKGRM---------KLYEKF 150

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             I ++     +++D+ HS +     I  I+
Sbjct: 151 DSIKKDCD---YVIDNTHSLERSKKEIEEII 178


>gi|293363209|ref|ZP_06610093.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2]
 gi|292553068|gb|EFF41817.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2]
          Length = 219

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 14/133 (10%)

Query: 92  ILLCDRFLDSSYAYQGERDSSQHLFL----DSL-QEISVQEVMPDCTIILDLPVDIGLKR 146
            +  DRF    Y +       +        D+L  ++  +   PD  I LD+  +   KR
Sbjct: 88  HIFLDRFSIEHYIFAHVNLQVKGQKYLNGYDALFSKLITKNETPDLAIYLDMSFETFQKR 147

Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVA 201
           + +R    E   +D F +++         ++ D+    A        I+D+   +   V 
Sbjct: 148 LFSRGRNVE---VDNF-KQNYDYFLNLYTVYKDLFIKQASKYKLNYVIIDTDNLTEAEVF 203

Query: 202 TNILNIVWELVQK 214
                I+ +   K
Sbjct: 204 NKAKTIIDQFQAK 216


>gi|237653428|ref|YP_002889742.1| deoxynucleoside kinase [Thauera sp. MZ1T]
 gi|237624675|gb|ACR01365.1| deoxynucleoside kinase [Thauera sp. MZ1T]
          Length = 212

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 60/183 (32%), Gaps = 28/183 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++   +I  EG  GAGKT+    L   LQ +         P      +           +
Sbjct: 2   LDKARYIVVEGPIGAGKTSLARRLADRLQAEAVFEQAELNPFLGRFYQQ---------SE 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +G   +   F   R+D +  +    +   + ++ D   D  + +  +  S   L   +L
Sbjct: 53  RWGLATQLS-FLFQRIDQLSTL--GPIEGERRVVADFLFDKDHLFAEQNLSPDEL---AL 106

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                  +       PD  I L    D  ++R++ R    E    +       +  E+  
Sbjct: 107 YRRVHDGLQPANAPRPDLVIYLQARPDTLMERIRKRGLDAERRITE-------LYLEQVA 159

Query: 175 QIF 177
           + +
Sbjct: 160 ERY 162


>gi|86141818|ref|ZP_01060342.1| deoxynucleoside kinase [Leeuwenhoekiella blandensis MED217]
 gi|85831381|gb|EAQ49837.1| deoxynucleoside kinase [Leeuwenhoekiella blandensis MED217]
          Length = 262

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 63/192 (32%), Gaps = 24/192 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKTT  S++      K         P      E             F  E
Sbjct: 66  YIAIEGNIGAGKTTLASMIAEDFNAKLILERFKDNPFLPKFYE-------DKSRYAFPLE 118

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDS-LQE 122
                F A R   + + I    +    ++ D   DS  S  +     S +   L   L  
Sbjct: 119 MS---FLADRYQQLLDDIGQYDLFKDFMIAD--YDSQKSLIFAKVTLSEEEYSLYQKLHR 173

Query: 123 ISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           I  +E+  PD  I L    D  L  ++ R    E                +  Q +L++ 
Sbjct: 174 IMYREIARPDLYIYLYQNTDRLLDNIKKRGRSYEQDI-------SEDYLVEINQGYLNMI 226

Query: 182 RNQPD-RCHIVD 192
           +N+      ++D
Sbjct: 227 KNKRGSNVKVID 238


>gi|327289187|ref|XP_003229306.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial-like [Anolis carolinensis]
          Length = 351

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 14/95 (14%)

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQE 122
           ++  A  L+H+       L  G+ ++ +R   S Y +      QG          + ++ 
Sbjct: 136 LLQYADALEHL-------LATGQGVILERSPYSDYVFLEAMFNQGYIHKRCIEHYNKIKR 188

Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRES 156
           IS+  V+P    I +D+PV    KR++ R    E 
Sbjct: 189 ISIDPVLPPHLVIYIDVPVSDVRKRIEERGKPYEK 223


>gi|326328036|pdb|3QEO|A Chain A, S74e-R104m-D133a Dck Variant In Complex With
           L-Deoxythymidine And Udp
 gi|326328037|pdb|3QEO|B Chain B, S74e-R104m-D133a Dck Variant In Complex With
           L-Deoxythymidine And Udp
          Length = 279

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    V R        +    +         +
Sbjct: 43  ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMEQKNGGNV 100

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +   R++ +S  
Sbjct: 101 LQMMYEKPERWSFTFQTYACLSMIRAQLASLNGKLKDAEKPVLFFERSVYSARYIFASNL 160

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 276


>gi|225717942|gb|ACO14817.1| Deoxynucleoside kinase [Caligus clemensi]
          Length = 253

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 71/208 (34%), Gaps = 26/208 (12%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
             EG  GAGKTT +  +++       +V    EP         R+ LL    +   ++  
Sbjct: 36  VVEGNIGAGKTTFLESIRKSSPPGLIEVV--EEPVQEWRTYKDRYDLLDIMYE--DSKKW 91

Query: 68  AIVFAAARLDHVENVI-----RPALMEGKILLCDRF-LDSSYAYQGERDSSQHLFLDSLQ 121
           + +F       +         RP  +  + LL  RF    +    G  +  +   L+ L 
Sbjct: 92  SFLFQIQVQLSMMKKYSLPPTRPIRIMERSLLSARFCFVENLHNNGHLNDIELHTLNDLY 151

Query: 122 EISV----QEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYF----ERKDVMIHE 171
              +         D  I L    ++  +R+  ++R    +S  L++F    E  +  +  
Sbjct: 152 NFVIKHDCFLCQTDLIIYLRTSPEVAYERMLRRSRSEAEKSLSLEHFRNIHELHEDWLFR 211

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQS 199
           K +  F  +    P    ++D       
Sbjct: 212 KTK--FQPL----PCPIVVIDGNQGIDD 233


>gi|307728538|ref|YP_003905762.1| deoxynucleoside kinase [Burkholderia sp. CCGE1003]
 gi|307583073|gb|ADN56471.1| deoxynucleoside kinase [Burkholderia sp. CCGE1003]
          Length = 226

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G GKT+    L +    +     +   P   P  E               A+
Sbjct: 19  YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLE---RFYRDTARYALPAQ 71

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
              + FA  R    + V   A MEG  L+ D F+   +  +A    ++   HL+      
Sbjct: 72  ---LHFALQRAQQAQEV-SAAHMEGTPLIAD-FMTQKNDIFARLTLQEDEWHLYRALAAR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFSRIQKRAVPMELQISDAY 166


>gi|145510937|ref|XP_001441396.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408646|emb|CAK73999.1| unnamed protein product [Paramecium tetraurelia]
          Length = 246

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 57/257 (22%)

Query: 1   MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC 57
           M+    I   EG  GAGK+T    L   L+++        EP              +L  
Sbjct: 1   MDKKFIIVSLEGNVGAGKST----LFEILRQEFPKAIFLMEPLEQWQKVHGNPNLNILEK 56

Query: 58  GVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKI--------------------LLC 95
              +           A  +RL   +  +R    E K+                    +  
Sbjct: 57  YYSDIQRWGFTFQIYAYQSRLMAWDRQLRAVAKEQKLQQIDNQFSSPSTNADDEPILVFT 116

Query: 96  DRFLDSS------YAYQGERDSSQH-----LFLDSLQEISVQEVMPDCTIILDLPVDIGL 144
           +R ++S+        Y     +         F + L E   Q ++ DC I ++ P +  L
Sbjct: 117 ERSIESARELFFKLCYNDGTINDLEYHIYEEFYEWLMEHYKQYLV-DCVIYVNTPPETCL 175

Query: 145 KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI--VDSAHS------ 196
           +R+  R    E+          +   +K  Q   D   +  ++  I  +D+  +      
Sbjct: 176 ERLTRRGRQEEACVP-------LDYLKKLHQRHEDWLSDNNNKFKIINIDATKNYVKDLD 228

Query: 197 -FQSVATNILNIVWELV 212
             ++V   +++ +  L+
Sbjct: 229 IKEAVRRQLIDEISTLI 245


>gi|330796068|ref|XP_003286091.1| hypothetical protein DICPUDRAFT_54025 [Dictyostelium purpureum]
 gi|325083910|gb|EGC37350.1| hypothetical protein DICPUDRAFT_54025 [Dictyostelium purpureum]
          Length = 228

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 63/214 (29%), Gaps = 38/214 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G+ GAGKTT  + L + L     ++    EP            L     D      
Sbjct: 19  IAISGLIGAGKTTLCTALGKVL-----NLPTYYEPV------IDNSYLADFYKDPKSFSF 67

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHL--------F 116
           +  ++   +    +  I      G   + DR  + DS +A                    
Sbjct: 68  QLQIYLLNQRFQQQQQIIWQGRGG---VQDRTIYEDSVFAKMLMESGLMDKRDYNTYCKL 124

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             +L         P+  I LD+  +  L+R++ R    E           +   +   Q 
Sbjct: 125 FSNLSNFMR---KPNLIIHLDVSPEQSLERIKRRDRECEKNI-------TLEYLQNLNQA 174

Query: 177 FLDIARNQPDRCHIVDSA----HSFQSVATNILN 206
           + +   +      ++          + +A  I  
Sbjct: 175 YQNFLHDISKYIAVIRVNWSEFQDPEELAQTIKE 208


>gi|224130660|ref|XP_002320896.1| predicted protein [Populus trichocarpa]
 gi|222861669|gb|EEE99211.1| predicted protein [Populus trichocarpa]
          Length = 174

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 43/206 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFGAEA 66
           G  G+GK T    +                          RH+    LL   ++      
Sbjct: 1   GGPGSGKGTQCPKIVEHF--------------------GFRHLCAGDLLQAEIESESENG 40

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCD--RFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             I         V + I   L++  +   D  RF+   ++   E  ++    +       
Sbjct: 41  TMIQNFKKEGKIVPSEITVKLLQQAMQQSDNKRFIIDGFSRNEENRAAFENIVR------ 94

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181
              + P+  +  D P +   KR+ NR   R    ++   ++  +  E        +    
Sbjct: 95  ---IKPEFVLFFDCPEEELTKRILNRNQGRVDDNIETIGKRLKVYFESTLPVINYY---- 147

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207
            N   +   +D+  S + V  ++ ++
Sbjct: 148 -NSKGKVQKIDAQRSIEEVFEDVKSV 172


>gi|149037566|gb|EDL91997.1| rCG55630, isoform CRA_d [Rattus norvegicus]
          Length = 253

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERD 110
              D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      QG   
Sbjct: 40  KSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIR 98

Query: 111 SSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                  + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 99  KQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 144


>gi|124486291|ref|YP_001030907.1| signal recognition particle-docking protein FtsY
           [Methanocorpusculum labreanum Z]
 gi|124363832|gb|ABN07640.1| signal recognition particle-docking protein FtsY
           [Methanocorpusculum labreanum Z]
          Length = 337

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT ++ +  +LQ +   V V    G T  A A   + + C  D  G + 
Sbjct: 143 ILFTGVNGTGKTTSVAKIAHYLQSQGLSVVV--GAGDTFRAGAIEQIRVHC--DRLGIKL 198

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            A    A     + + +  A      ++L D            R  ++   ++ L++I  
Sbjct: 199 IAHQEGADPSAVLYDTVEYAKAHKTDVVLAD---------SAGRFHNRVNLMNQLEKI-K 248

Query: 126 QEVMPDCTIILD 137
           + + PD    +D
Sbjct: 249 RVMKPDLVFYVD 260


>gi|2130562|gb|AAB58327.1| signal recognition particle receptor alpha subunit [Thermococcus
           zilligii]
          Length = 329

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  G GKTT I+ L  +L+++ + V V      T  A A     L       G + 
Sbjct: 135 IAFVGFNGGGKTTTIAKLAHWLKKQGFSVVVAA--SDTFRAGAIEQ--LEEHAKRVGVKV 190

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R+      +D +++I  
Sbjct: 191 IKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRNELNRNLMDEMKKIV- 240

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 241 RVTKPDLVIF 250


>gi|73975381|ref|XP_539307.2| PREDICTED: similar to Deoxycytidine kinase (dCK) [Canis familiaris]
          Length = 260

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 40/240 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGT--PAAEA 49
           I+ EG   +GKTT +++LK+  +   ++V                   E   +       
Sbjct: 24  IAIEGNIASGKTTFVNILKQVCED--WEVVPEPVARWCSVRSAQGDCEELTTSQKSGGNV 81

Query: 50  ARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSY 103
            + +        F  ++ A + +  R         +++  +P L   + +  DR++ ++ 
Sbjct: 82  LQMMYEKPERWSFTFQSYACL-SRIRAQLACLDGKLKDAEKPVLFFERSIYSDRYVFAAN 140

Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157
            Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E   
Sbjct: 141 LYESECMNETEWTIYQDWHDWMNHQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGI 200

Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            L+Y E+     +  ++H   +  F D  +  P     +D    F+     ++  V E +
Sbjct: 201 PLEYLEKLHYKHESWLLHRTLKTNF-DFLQEIP--ILTLDINEDFKDKHDGLIEKVKEFL 257


>gi|300867115|ref|ZP_07111781.1| Adenylate kinase [Oscillatoria sp. PCC 6506]
 gi|300334870|emb|CBN56947.1| Adenylate kinase [Oscillatoria sp. PCC 6506]
          Length = 188

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 49/216 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T   LL  F +                  E  R  +      + G +A+A
Sbjct: 5   FLGPPGAGKGTQAQLLAAFWK-----------IPHISTGEILRACV--VAKTDLGLKAQA 51

Query: 69  IV----FAAAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-Q 121
            +        R  +D V   ++ A      +L D F          R  +Q  FL+ L Q
Sbjct: 52  FMDRGELVPDRVLMDIVRERLKEADASNGWIL-DGF---------PRTVAQATFLEELLQ 101

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-- 179
           E     +    T+ LD+P +I + R+  R    ++               +R +++ +  
Sbjct: 102 EWDRGGIQ---TVNLDVPDEILVVRLLARGRKDDTEETIR----------RRLEVYREQT 148

Query: 180 --IARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211
             +     DR     VD   S ++V  +I  ++   
Sbjct: 149 APLIGFYGDRHQLITVDGDRSLEAVTADIQQLLEPA 184


>gi|288930433|ref|YP_003434493.1| signal recognition particle-docking protein FtsY [Ferroglobus
           placidus DSM 10642]
 gi|288892681|gb|ADC64218.1| signal recognition particle-docking protein FtsY [Ferroglobus
           placidus DSM 10642]
          Length = 326

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L   L +    V +    G T  A A     L     + G   
Sbjct: 134 IIFVGVNGTGKTTTIAKLAYRLLKSGKSVVLAA--GDTFRAGAIEQ--LEEHGKKLGVRV 189

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A  +G  ++L D            R  ++   +D L++I  
Sbjct: 190 IKHKPGADPAAVIYDAIKHAESKGIDVVLSD---------TAGRMHTKKNLIDQLEKI-K 239

Query: 126 QEVMPDCTIILD 137
           +   PD TI +D
Sbjct: 240 RVTNPDLTIFVD 251


>gi|212223740|ref|YP_002306976.1| signal recognition particle GTPase [Thermococcus onnurineus NA1]
 gi|212008697|gb|ACJ16079.1| signal recognition particle GTPase [Thermococcus onnurineus NA1]
          Length = 301

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  G+GKTT I+ L  +L++    V +      T  A A   V         G + 
Sbjct: 107 IAFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 162

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I  A   G  ++L D            R+      +D +++I  
Sbjct: 163 IKHSYGADPAAVAYDAIGHAKARGIDVVLID---------TAGRNELNRNLMDEMKKIV- 212

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 213 RVTKPDLVIF 222


>gi|296109711|ref|YP_003616660.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus infernus ME]
 gi|295434525|gb|ADG13696.1| signal recognition particle-docking protein FtsY
           [Methanocaldococcus infernus ME]
          Length = 370

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ L   L+ K Y V +    G T  A A     L       G + 
Sbjct: 166 IVFVGINGTGKTTSIAKLAYKLKNKGYSVVLAA--GDTFRAGAIEQ--LEEHAKRIGVKV 221

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A  +   ++L D            R ++    +D +++  V
Sbjct: 222 IKQKPGADAAAVIYDAIQHAKAKKIDVVLAD---------TAGRQATNINLMDEIKK-VV 271

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 272 RVTKPDLVIF 281


>gi|242279965|ref|YP_002992094.1| adenylylsulfate kinase and related kinase-like protein
           [Desulfovibrio salexigens DSM 2638]
 gi|242122859|gb|ACS80555.1| Adenylylsulfate kinase and related kinase-like protein
           [Desulfovibrio salexigens DSM 2638]
          Length = 202

 Score = 49.6 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 48/219 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+   GK+T    L   L+ +   V +          +  R + +           
Sbjct: 15  IWITGLPACGKSTIARKLYDKLRAEGVKVVLLCM-------DDRRKIYIPNPEYTCDERQ 67

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            A                  +  G+ ++ D       A++    +     ++   E    
Sbjct: 68  RAYNLF-------VEDALSIMQSGRCVILD-----GSAHELCWRNDAREKIEFFAE---- 111

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI--FLDI---- 180
                  + L  PV++ +KR   R      A L  +E+      E++R    F D+    
Sbjct: 112 -------VYLRCPVNMAMKRESGRQQGLVMAGL--YEKA----LERQRTGKEFKDLGEVI 158

Query: 181 -----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQ 213
                 +   +   IVD +  +       +   + +  +
Sbjct: 159 GVDVKFQEDNNAECIVDTAGKNPDETFEEVQACLQKWRK 197


>gi|268317555|ref|YP_003291274.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252]
 gi|262335089|gb|ACY48886.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252]
          Length = 227

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 65/223 (29%), Gaps = 38/223 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG+ G GKTT   L+      +         P      E           + +  
Sbjct: 14  RYLVIEGVIGVGKTTLARLIAERFGGRLILEEFEENPFLPRFYE---------DPERWAF 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123
             +    A+      + ++R        ++ D   D    +         L L ++L  +
Sbjct: 65  HTQLSFLASRFRQQKQLLLRDLF--HPFVVSDYAFDKDRIFARINLKGDELQLYETLYTL 122

Query: 124 SVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  PD  + L    D  L+ ++ R    E       ER  +            +  
Sbjct: 123 MEPNVPTPDLIVYLQSTPDRLLENIRKRGRPYEQ----RIERSYLE----------ALCE 168

Query: 183 NQPDRC--------HIVDSAHSFQSVA--TNILNIVWELVQKR 215
                          IV++      V    ++  ++ +++++R
Sbjct: 169 AYDHYFFHYTKGPLLIVNAVQ-IDFVKNPEDLEELIRQILERR 210


>gi|255629285|gb|ACU14987.1| unknown [Glycine max]
          Length = 207

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 61/213 (28%), Gaps = 57/213 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        Y            A +  R  + S   +          
Sbjct: 27  GGPGSGKGTQCANIVENF---GY--------THLSAGDLLRAEIKSGSENG--------- 66

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I+  + EGKI+       S         A Q   +          +  
Sbjct: 67  ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 110

Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +    + P   +  + P +   +R+ +R   RE   ++   R+  +  E      
Sbjct: 111 NRAAFEKVTGIEPAFVLFFECPEEEMERRLLSRNQGREDDNIETIRRRFKVFLESSLPVI 170

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
             +     +   +   +D+A   + V   +  I
Sbjct: 171 NYY-----DAKGKVRKIDAARPIEEVFETVKGI 198


>gi|297585305|ref|YP_003701085.1| hypothetical protein Bsel_3038 [Bacillus selenitireducens MLS10]
 gi|297143762|gb|ADI00520.1| hypothetical protein Bsel_3038 [Bacillus selenitireducens MLS10]
          Length = 410

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 14/141 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G +G GK++ I  +++ +  K   +++    G        + V       +       + 
Sbjct: 219 GTDGTGKSSLIKNIRKEIPVKTKSIYL----GTGEDGWELKQVKKMNKNFQGPILGRLLK 274

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                ++    VIR  +    K++L DRF        G    S++   + + +I +    
Sbjct: 275 TIILPIEFCLRVIRGKVNAKYKLILIDRFP-------GWAIISKNKLRNYIYKIIL--PK 325

Query: 130 PDCTIILDLPVDIGLKRVQNR 150
           PD  I L     I  +R + R
Sbjct: 326 PDLVIFLHGDPQILFERKKER 346


>gi|295675597|ref|YP_003604121.1| deoxynucleoside kinase [Burkholderia sp. CCGE1002]
 gi|295435440|gb|ADG14610.1| deoxynucleoside kinase [Burkholderia sp. CCGE1002]
          Length = 226

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GKT+    L +          +       P  E                +
Sbjct: 19  YIAIEGPIGVGKTSLARRLAQRWSMH----ELFERWQDNPFLE---RFYRDTARYALPVQ 71

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
              + FA  R    + V   A   G  L+ D F+   +  +A    ++    L+      
Sbjct: 72  ---LHFALQRAQQAQEV-SAAQASGTPLIAD-FITQRNDIFARLTLQEDEWLLYRALAAR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 127 LDVSAPEPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166


>gi|218132359|ref|ZP_03461163.1| hypothetical protein BACPEC_00218 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992697|gb|EEC58699.1| hypothetical protein BACPEC_00218 [Bacteroides pectinophilus ATCC
           43243]
          Length = 235

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 38/138 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRF------------LQRKN-------------------- 32
           + IS  G +G GK+T + LL               L+  N                    
Sbjct: 1   MVISLSGYDGMGKSTSVDLLMEKICENHGLKGMSALKANNGTEVYENIEQVDDIYKVLSR 60

Query: 33  YDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAARLDH---VENVIRPAL 87
           YDV  TR    +   +  + +++    D F    E I  V  AAR +     ++VI   L
Sbjct: 61  YDVITTRFYFRSNKMQKLQEMVMFAETDVFD-NTELIKEVTDAARQEAQIWYDHVIWKLL 119

Query: 88  MEGKILLCDRFLDSSYAY 105
            + KI++ DR+     AY
Sbjct: 120 RKNKIIIYDRYYYDEIAY 137


>gi|167040398|ref|YP_001663383.1| guanylate kinase [Thermoanaerobacter sp. X514]
 gi|256752265|ref|ZP_05493128.1| guanylate kinase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914482|ref|ZP_07131798.1| guanylate kinase [Thermoanaerobacter sp. X561]
 gi|307724282|ref|YP_003904033.1| guanylate kinase [Thermoanaerobacter sp. X513]
 gi|166854638|gb|ABY93047.1| Guanylate kinase [Thermoanaerobacter sp. X514]
 gi|256748833|gb|EEU61874.1| guanylate kinase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889417|gb|EFK84563.1| guanylate kinase [Thermoanaerobacter sp. X561]
 gi|307581343|gb|ADN54742.1| guanylate kinase [Thermoanaerobacter sp. X513]
          Length = 207

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  GAGK T    L    +     +   TR+P      E   +   S    
Sbjct: 6   KKGLLIVLSGPSGAGKGTICKALMEKEKDLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   E ++ +  A    H     ++ +   L EG  ++                    L 
Sbjct: 65  EKMIENDSFLEWAKVYGHYYGTPKDFVLKNLDEGNDVV--------------------LE 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +D    + ++E  P+   I  LP   +    R++ R +  E   +  F+           
Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             + ++         +++   S +     I  I+
Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIKAII 185


>gi|332159470|ref|YP_004424749.1| putative kinase [Pyrococcus sp. NA2]
 gi|331034933|gb|AEC52745.1| putative kinase [Pyrococcus sp. NA2]
          Length = 180

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 57/215 (26%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G GKTT   LL   L    Y+                R   L  G      
Sbjct: 1   MLIAITGTPGVGKTTIAKLLAERL---GYEYV------------NLRDFALEKGCGRK-- 43

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                         V + +   + E              AY  ER+       D++ +  
Sbjct: 44  --------------VNDEVEVEIDE-------------LAYFVEREFKGK---DAILDGH 73

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  +MP D  I+L +   I  +R++ R   +E    +  E + V          L  A +
Sbjct: 74  LSHLMPVDLVIVLRVHPGIIGERLKKRGYSKEKIGEN-VEAELVD-------AILIEAID 125

Query: 184 QPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
           + +    VD+   + + V   IL ++   V++R+ 
Sbjct: 126 EHENVIEVDTTNKTPEEVVNEILELINSGVKRRIG 160


>gi|228985664|ref|ZP_04145817.1| uridine kinase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|228774059|gb|EEM22472.1| uridine kinase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
          Length = 187

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 35/212 (16%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 2   MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDSYH 42

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A+   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 43  FDICP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IILDYPFAY 92

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L     Q +  D TI +D P+DI + R   R    E+    + + K  + +   R+ +L+
Sbjct: 93  LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSAIHNDLKHYITYA--RKAYLE 148

Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
                +P+   ++D A S   +   I   ++ 
Sbjct: 149 ALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180


>gi|258651388|ref|YP_003200544.1| adenylate kinase [Nakamurella multipartita DSM 44233]
 gi|258554613|gb|ACV77555.1| adenylate kinase [Nakamurella multipartita DSM 44233]
          Length = 181

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 33/207 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVDE 61
           L I   G +GAGK T  SLL   L         T +             +L+       +
Sbjct: 3   LLIV--GPQGAGKGTQASLLAEHL---GIPHISTGDIFRANVGAGTELGVLAKTYMDAGD 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +   +   AAR D       P    G   L D F  +      + D    + ++  +
Sbjct: 58  LVPDEVTVAMVAARFD------EPDAGRGF--LLDGFPRTV----PQADKLGEILIERGE 105

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++       D  I+L++P +I L+R+  R    ++A      R+  + H +       + 
Sbjct: 106 DV-------DKVILLEVPDEILLERMLARGRADDTAEA--ISRRLELYHTET----KPLL 152

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
                +   +D       V   I   +
Sbjct: 153 DFYAGKLVEIDGVGEIDEVQQRIRTAL 179


>gi|224510667|pdb|3EXK|A Chain A, Human Dck R104mD133A IN COMPLEX WITH L-Dt And Adp
 gi|240104636|pdb|3HP1|A Chain A, Crystal Structure Of Human Dck R104mD133A IN COMPLEX WITH
           L-Dt And Adp
          Length = 280

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 38/239 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   ++V    V R        +    +         +
Sbjct: 44  ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 101

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         +++  +P L   + +   R++ +S  
Sbjct: 102 LQMMYEKPERWSFTFQTYACLSMIRAQLASLNGKLKDAEKPVLFFERSVYSARYIFASNL 161

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 162 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 221

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           L+Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 222 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 277


>gi|312076083|ref|XP_003140703.1| deoxynucleoside kinase [Loa loa]
 gi|307764137|gb|EFO23371.1| deoxynucleoside kinase [Loa loa]
          Length = 441

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 58/181 (32%), Gaps = 26/181 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAA-------- 50
             I  EG  G+ K+     L   L      + +  +V + R                   
Sbjct: 79  KLIVVEGNIGSNKSDMARSLADRLGFYFIPEFQMDEVLIDRFGNDYRNYYHLFPKSFRLF 138

Query: 51  --RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
                      DE     + I+    + D   N +   +  G+ ++ +R   + + +   
Sbjct: 139 DMNMFYKDPFNDETAKMRDRIL--RCKFDQYLNAVAHVMNTGQGVVLERTPHTDFIFANA 196

Query: 109 RDSSQHL--------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                ++        +++    I      P   I LD+PVD  L+ ++ + S  + A +D
Sbjct: 197 CRVKNYIGPEYFTYYYIERKNMIPNCRFWPHLVIYLDVPVDKCLENIRQKGSTDKIAVVD 256

Query: 161 Y 161
            
Sbjct: 257 R 257


>gi|227878414|ref|ZP_03996354.1| deoxyadenosine kinase [Lactobacillus crispatus JV-V01]
 gi|227861943|gb|EEJ69522.1| deoxyadenosine kinase [Lactobacillus crispatus JV-V01]
          Length = 244

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 52/166 (31%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 34  IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDNNP------------VLPLYYKDMKRYT 81

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD----------SSYAYQGERDSSQHLF 116
              +     L+H    I  A+ E   +  DR +            S              
Sbjct: 82  --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 138

Query: 117 LDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           LD++ E +       PD  I + + +D  L R++ R    E    D
Sbjct: 139 LDNMMEDTPGNPSKKPDLLIYIHVSLDTMLNRIKKRGRSFEQISTD 184


>gi|328765851|gb|EGF75955.1| hypothetical protein BATDEDRAFT_93182 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 185

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 68/213 (31%), Gaps = 56/213 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS  G+ GAGKTT  + L   L+                     R +L      E   + 
Sbjct: 15  ISIAGVSGAGKTTIATQLNERLKNS-------------------RKLLFDEYDFEGPDDI 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
              V    R  + +      L      + D                + L  + L  I + 
Sbjct: 56  IDWV---DRGANYDEWNLSPL------ISD---------------LEALLTEPLNYIVLD 91

Query: 127 EVMP----------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                         D TI +D P+DI + R   R     S  +  FE K+ +     R+ 
Sbjct: 92  FPFAYKHSMTSNLIDFTIYIDTPLDIAMARRVIRDFRNSSTEIILFEMKNYITQG--RRG 149

Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208
           ++++ ++ +P+   IV        +   I  ++
Sbjct: 150 YIEMIKSIRPNSDIIVAGTLPLSKIIEKICEVI 182


>gi|18977506|ref|NP_578863.1| putative kinase [Pyrococcus furiosus DSM 3638]
 gi|46397232|sp|Q8U1S1|KAD6_PYRFU RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|18893211|gb|AAL81258.1| hypothetical protein PF1134 [Pyrococcus furiosus DSM 3638]
          Length = 180

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 57/215 (26%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G GKTT    L   L          R+        A    +     DE   
Sbjct: 1   MIIAITGTPGVGKTTVARKLAEKL---GCKYVNLRD-------FALEKGIGEVKGDELEV 50

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E + + +       VE   +     GK ++ D                            
Sbjct: 51  EVDELAYF------VEKEFK-----GKNVVLDGH-------------------------- 73

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  +MP D  I+L        +R++ R   ++    +  E + V +        L  A +
Sbjct: 74  LSHLMPADLVIVLRAHPKTIAERLKERGYSKDKIGEN-VEAELVDVI-------LIEALD 125

Query: 184 QPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
           + +    VD+   + + V   ILN++   +++RV 
Sbjct: 126 EHENVIEVDTTGKTPEEVVNEILNLINSGIKRRVG 160


>gi|290890353|ref|ZP_06553429.1| hypothetical protein AWRIB429_0819 [Oenococcus oeni AWRIB429]
 gi|290479971|gb|EFD88619.1| hypothetical protein AWRIB429_0819 [Oenococcus oeni AWRIB429]
          Length = 212

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 37/187 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT   L+   L           EP   P A+     L      ++G      ++  
Sbjct: 3   GVGKTTLTKLISEHLGT---------EPFYEPVADNPVLPLYYSNPKQYGFL--LQIYFL 51

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-SQHLFLDSLQEI------S 124
            R   +   I+ AL +   +L DR  + D+ +  Q   D       ++   E+       
Sbjct: 52  NRRFSM---IKAALADDNNVL-DRSIYEDALFTEQNHLDGNISDQEMNVYNELLNNMMSE 107

Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ +    PD  I  D   +  L R++ R    E      F+    +     R  +  + 
Sbjct: 108 LKGLKKKAPDLMIYADTDFETILYRIKKRARPYEQ-----FDNNPSL-----RDYYHKMW 157

Query: 182 RNQPDRC 188
                  
Sbjct: 158 AAYKQWY 164


>gi|116490891|ref|YP_810435.1| deoxynucleoside kinase [Oenococcus oeni PSU-1]
 gi|116091616|gb|ABJ56770.1| Deoxynucleoside kinase [Oenococcus oeni PSU-1]
          Length = 219

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 37/187 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT   L+   L           EP   P A+     L      ++G      ++  
Sbjct: 10  GVGKTTLTKLISEHLGT---------EPFYEPVADNPVLPLYYSNPKQYGFL--LQIYFL 58

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-SQHLFLDSLQEI------S 124
            R   +   I+ AL +   +L DR  + D+ +  Q   D       ++   E+       
Sbjct: 59  NRRFSM---IKAALADDNNVL-DRSIYEDALFTEQNHLDGNISDQEMNVYNELLNNMMSE 114

Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ +    PD  I  D   +  L R++ R    E      F+    +     R  +  + 
Sbjct: 115 LKGLKKKAPDLMIYADTDFETILYRIKKRARPYEQ-----FDNNPSL-----RDYYHKMW 164

Query: 182 RNQPDRC 188
                  
Sbjct: 165 AAYKQWY 171


>gi|114330195|ref|YP_746417.1| sulfate adenylyltransferase/adenylyl-sulfate kinase [Nitrosomonas
           eutropha C91]
 gi|114307209|gb|ABI58452.1| adenylylsulfate kinase [Nitrosomonas eutropha C91]
          Length = 565

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G+ G+GK+T  + L++ L  +                   R  +L      
Sbjct: 393 HKGKVIWLTGLSGSGKSTIANALEKELHSQGK-----------------RTYILDGDNMR 435

Query: 62  FGAEAEAIVFAAARLD---HVENVIRPALMEGKILLC 95
            G   +     A R++    V  V +  +  G I++ 
Sbjct: 436 HGLNKDLGFTNADRVENIRRVAEVAKLMMDAGLIVIT 472


>gi|312864482|ref|ZP_07724713.1| deoxyguanosine kinase [Streptococcus downei F0415]
 gi|311099609|gb|EFQ57822.1| deoxyguanosine kinase [Streptococcus downei F0415]
          Length = 213

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 41/233 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L      V                  +L     +   
Sbjct: 1   MLIVLAGTIGAGKSSLAASLGEHL---GTQVFYEAVDNNP---------VLDLYYQDPKK 48

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117
            A  +   F   R       I+ A      +L DR +       +  Y+    +   L +
Sbjct: 49  YAFLLQIFFLNKRFQS----IKAAYKADNNIL-DRSIFEDELFLTLNYKNGNVTKTELDI 103

Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 + L+E+  + +  PD  + +D+  D  L+R+  R    E    +    +    +
Sbjct: 104 YKELLANMLEELEGMPKKSPDLLVYIDVSFDKMLERISKRGRSFEQNADNP---ELYEYY 160

Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
           ++    + D   N    P     +D       V   + L  V++LV   +  L
Sbjct: 161 QQVHGEYPDWYENYSVSPK--IRIDGNK-LDFVKNPDDLQTVFDLVDSELKKL 210


>gi|325957719|ref|YP_004293131.1| deoxyadenosine kinase [Lactobacillus acidophilus 30SC]
 gi|325334284|gb|ADZ08192.1| deoxyadenosine kinase [Lactobacillus acidophilus 30SC]
 gi|327184367|gb|AEA32814.1| deoxyadenosine kinase [Lactobacillus amylovorus GRL 1118]
          Length = 215

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L           
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKNMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     L+H    I  A+ +   +  DR  + D+ +    A     D ++    D L
Sbjct: 53  --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADNKVADPTEFKIYDDL 109

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            E  +++        PD  I + + +D  LKR++ R    E    D
Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLKRIKKRGRSFEQISTD 155


>gi|225012276|ref|ZP_03702713.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Flavobacteria bacterium MS024-2A]
 gi|225003831|gb|EEG41804.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Flavobacteria bacterium MS024-2A]
          Length = 373

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 24/182 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G GK+T    L    + +         P                       E
Sbjct: 178 YIVVEGNIGVGKSTLTKKLGAQYKAEILLETFVDNP-------YLASFYKDPKKYALAVE 230

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQEI 123
                F   RL       +    +   ++ D FL+ S  +  +  S     +  +   + 
Sbjct: 231 T---FFLNDRLAQTAQFWKHNSTK---VVSDYFLNKSLVFATQNLSKDDFIIYQEEFSKA 284

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDIAR 182
             ++V P   + L   V    K+++ R           FE++       K  + +  + +
Sbjct: 285 IKKQVNPTLMVYLHAEVPHLQKQIKKRGRP--------FEKEIQADYLMKIAKGYEKLIQ 336

Query: 183 NQ 184
             
Sbjct: 337 TD 338


>gi|283436150|ref|NP_001164443.1| adenylate kinase 1 [Apis mellifera]
          Length = 192

 Score = 49.3 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 5/86 (5%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDIARNQPDRC 188
           D  I  D   +I  KR+  R  + + A  D  E  +  + +    R    +I  +  D+ 
Sbjct: 109 DLIIFFDASSEILEKRLLGRAEVLKRAD-DNQETIKNRIKLFNMNRHA--EIIEHYKDKV 165

Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214
             +D+  +   +   ++ ++  L+ +
Sbjct: 166 VKIDANGNEDEIFDEVVKVINTLLNE 191


>gi|329571695|gb|EGG53376.1| shikimate kinase [Enterococcus faecalis TX1467]
          Length = 168

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR+      +    +++  ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIAEDTENQRPLAIEHSSKEIITLFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
              S + +   IL  + E
Sbjct: 151 TNRSPEEIINEILQQLKE 168


>gi|118586309|ref|ZP_01543763.1| deoxyguanosine kinase/deoxyadenosine kinase, I subunit [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433272|gb|EAV39984.1| deoxyguanosine kinase/deoxyadenosine kinase, I subunit [Oenococcus
           oeni ATCC BAA-1163]
          Length = 219

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 37/187 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT   L+   L           EP   P A+     L      ++G      ++  
Sbjct: 10  GVGKTTLTKLISEHLGT---------EPFYEPVADNPVLPLYYSNPKQYGFL--LQIYFL 58

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-SQHLFLDSLQEI------S 124
            R   +   I+ AL +   +L DR  + D+ +  Q   D       ++   E+       
Sbjct: 59  NRRFSM---IKAALADDNNVL-DRSIYEDALFTEQNHLDGNISDQEMNVYNELLNNMMSE 114

Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ +    PD  I  D   +  L R++ R    E      F+    +     R  +  + 
Sbjct: 115 LKGLKKKAPDLMIYADTDFETILYRIKKRARPYEQ-----FDNNPSL-----RDYYHKMW 164

Query: 182 RNQPDRC 188
                  
Sbjct: 165 AAYKQWY 171


>gi|288919598|ref|ZP_06413927.1| pantothenate kinase protein [Frankia sp. EUN1f]
 gi|288348996|gb|EFC83244.1| pantothenate kinase protein [Frankia sp. EUN1f]
          Length = 231

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 25/156 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFGAE 65
           ++ +G + AGKTT    L   L  +   V      G   P     R   LS         
Sbjct: 34  VAIDGPDAAGKTTLADELAGILTDRGRPVIRASVDGFHQPQTTRRRRGSLSPQGYFLD-- 91

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY-----------AYQGERDSSQH 114
             A  + A R  H+ + + PA          R+  +++           A +   D+   
Sbjct: 92  --AFDYTALRR-HLLDPLSPAGDR-------RYRTAAFDHLHDSPLDSPAREAPSDAVLI 141

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +    L    ++    D T+ L +     L+R   R
Sbjct: 142 VDGVFLLRDQLRSCW-DLTVFLQISPAESLRRALQR 176


>gi|148708064|gb|EDL40011.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform
           CRA_a [Mus musculus]
          Length = 273

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERD 110
              D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      QG   
Sbjct: 40  KSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYIR 98

Query: 111 SSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                  + ++ +++ E + P   I +D+PV     R+Q +    E
Sbjct: 99  KQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 144


>gi|145534776|ref|XP_001453132.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420832|emb|CAK85735.1| unnamed protein product [Paramecium tetraurelia]
          Length = 768

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 79/223 (35%), Gaps = 29/223 (13%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           S EG  GAGK+T    L   L+ +        EP             L+     +    +
Sbjct: 553 SLEGNIGAGKST----LFEILKEEYPQAIFLMEPLEQWQKINGNSN-LNILEKYYSDARQ 607

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD------- 118
             V+       ++      ++   ++  +R ++S+    +Q   +  +   ++       
Sbjct: 608 VGVYFLNLRLLIQINGLGQIIAIVLVFTERSIESARELFFQLCCNDGKISQIEFEIYEEF 667

Query: 119 --SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              L     Q ++ DC I ++ P ++ L+R+  R    E+          +    K  Q 
Sbjct: 668 YQWLMNHYQQYLI-DCVIYVNTPPEVCLERLIKRGRSEEACVP-------LDYLRKLHQR 719

Query: 177 FLDIARNQPDRCHI--VDSAHSF---QSVATNILNIVWELVQK 214
             D    + +R     +D+  ++   Q V  ++  ++   +QK
Sbjct: 720 HEDWLSEKSNRFLTIKIDATLNYVQDQKVKESVRQLLLSEIQK 762


>gi|251781584|ref|YP_002995885.1| deoxyadenosine kinase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390212|dbj|BAH80671.1| deoxyadenosine kinase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 229

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 39/232 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV         P  +                
Sbjct: 17  MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 63  KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 121

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 122 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 177

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
           +    +     +    P     +D   S   V   + L  V ++V  ++  L
Sbjct: 178 QVHGEYPTWYEDYKVSPK--MKIDGN-SLDFVQNPDDLATVLQMVDDKLKEL 226


>gi|195998824|ref|XP_002109280.1| hypothetical protein TRIADDRAFT_53152 [Trichoplax adhaerens]
 gi|190587404|gb|EDV27446.1| hypothetical protein TRIADDRAFT_53152 [Trichoplax adhaerens]
          Length = 463

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 58/243 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  G+GK+T   LL +  Q  N  V   V         A     + L  GV     
Sbjct: 251 VVLLGPTGSGKSTQADLLSKKYQLINVCVDSLVKEAIVKQSKAGNGIKLYLDRGVAAPD- 309

Query: 65  EAEAIVFAAARLDHVEN--VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A++F       V+        + +G  +L            G   + +         
Sbjct: 310 ---ALMF-----QLVKERLCQLDCIKKG-WVL-----------HGYPRTREQAV-----R 344

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYF----ER 164
           ++   + P+    LD+P D  L+R+  R +               R +          + 
Sbjct: 345 MAEIGLEPNRVFALDIPTDSILERLSLRGTDPITGARYHMHYNPPRTNEIASRLRTHPDD 404

Query: 165 KDVMIHEKR--RQIFL-DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            +  I ++    QIF+ DI     +    +++     ++  ++   +       VSPL  
Sbjct: 405 TEDAIMKRLSAYQIFIDDICEFYGNTIKHINADQDPHTIFESLEAGI-------VSPLPV 457

Query: 222 KKD 224
           + D
Sbjct: 458 RPD 460


>gi|332026734|gb|EGI66843.1| Deoxynucleoside kinase [Acromyrmex echinatior]
          Length = 247

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 33/212 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +  EG  G+GKTT +S  K+F      +V V  EP          ++L    +       
Sbjct: 15  VCVEGNIGSGKTTFLSHFKKF-----DNVTVLEEPVELWRDVCGTNLL---ELMYSEPSR 66

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI----LLCDRFLDSSYAY------QGERDSSQHLF 116
            A +F          +    L   K      + +R + S+  +             +   
Sbjct: 67  YAFLF-----QSYVQLTMLQLHTCKTPSPYTIMERSVYSAMCFVENLKRNNILRDVEVTI 121

Query: 117 LDSLQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173
           L++  +  ++   +  D  + L    +I  +R++ R    E+A  L+Y ++    IH+  
Sbjct: 122 LENWYDWCLKNANIETDLIVYLRTTPEIVYERMKQRGRKEENAISLEYLKQ----IHQ-V 176

Query: 174 RQ--IFLDIARNQPDRCHIVDSAHSFQSVATN 203
               ++  I +  P     ++       +   
Sbjct: 177 HDDWLYHQILKPLPSPVITINGDRELHEMVEE 208


>gi|295425798|ref|ZP_06818479.1| deoxyadenosine kinase [Lactobacillus amylolyticus DSM 11664]
 gi|295064491|gb|EFG55418.1| deoxyadenosine kinase [Lactobacillus amylolyticus DSM 11664]
          Length = 225

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 15  IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDNNP------------VLPLYYKDMKRYT 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115
              +     L+H    I  A+ E   +  DR            +DS  A           
Sbjct: 63  --FLLNTYLLNHRLAQINQAVQEKNSV-SDRSIYEDALFFKMNVDSKIA-DPTEFKIYDD 118

Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            L+++ E +       PD  I + + +D  L R++ R    E    D
Sbjct: 119 LLENMMEDTPGNPSKKPDLLIYIHVSLDTMLARIKKRGRSFEQISTD 165


>gi|302792633|ref|XP_002978082.1| hypothetical protein SELMODRAFT_5337 [Selaginella moellendorffii]
 gi|300154103|gb|EFJ20739.1| hypothetical protein SELMODRAFT_5337 [Selaginella moellendorffii]
          Length = 188

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 46/220 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVD 60
           I F G  G GK T    L    +   Y    T +        G+   +    ++    + 
Sbjct: 1   IVFLGGPGCGKGTQCEELV---RDFGYSHLSTGDLLRAEVASGSELGKQCDTLMKEGKLV 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   +              + A+ + K   C RFL   +             +D  
Sbjct: 58  PLDVTINLL--------------KQAMGKAK---CKRFLIDGF----------PRAVDQA 90

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD------YFERKDVMIHEKRR 174
            E   +   PD  + LD  +++  KR+  R      A  +       FE   +   +   
Sbjct: 91  HEFEAKVGKPDVVLCLDCSLELMEKRLLQRGKASGRADDNIETIKKRFETF-LAESKPVI 149

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +    ++ P     + +      V  ++   +    +K
Sbjct: 150 DYYR---KSLPKAVKTIPTDKMPDEVYADVKAALKATAEK 186


>gi|323126377|gb|ADX23674.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 213

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 39/232 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 47  KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
           +    +     +    P     +D   S   V   + L  V ++V  ++  L
Sbjct: 162 QVHGEYPTWYEDYKVSPK--MKIDGN-SLDFVQNPDDLATVLQMVDDKLKEL 210


>gi|15921836|ref|NP_377505.1| hypothetical protein ST1542 [Sulfolobus tokodaii str. 7]
 gi|15622623|dbj|BAB66614.1| 168aa long hypothetical protein [Sulfolobus tokodaii str. 7]
          Length = 168

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 28/179 (15%)

Query: 43  GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102
           G   ++  R+++       F      + +     D VEN ++P+L  G I L D ++ + 
Sbjct: 6   GERISQVKRNIV-------FERRTLFLAYVTDLADQVENYVKPSLDSGFIALADGYILTL 58

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLD 160
            ++ G     +  +++ +  I  +       I   L    +  +KR+     +++   LD
Sbjct: 59  MSW-GLVRGLEKDWMNDVLSIFPRSA-----IYFSLISRPEEIIKRI-----IKKRGFLD 107

Query: 161 YFERK-DVMIHEKRRQIFLDIARNQPDRCH-------IVDSAHSFQSVATNILNIVWEL 211
                 D+ I       + D                 I+ +  +F  V   I+N +  L
Sbjct: 108 PLSAGIDICIKSDVFTAYEDYINEFQKVLISLSTKESIIYTDRNFDEVHKEIVNKIESL 166


>gi|256843875|ref|ZP_05549362.1| deoxyadenosine kinase [Lactobacillus crispatus 125-2-CHN]
 gi|256849565|ref|ZP_05554997.1| deoxyadenosine kinase [Lactobacillus crispatus MV-1A-US]
 gi|262046233|ref|ZP_06019196.1| deoxyadenosine kinase [Lactobacillus crispatus MV-3A-US]
 gi|293381343|ref|ZP_06627345.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1]
 gi|295693852|ref|YP_003602462.1| deoxyadenosine kinase [Lactobacillus crispatus ST1]
 gi|312984064|ref|ZP_07791412.1| deoxyadenosine kinase [Lactobacillus crispatus CTV-05]
 gi|256613780|gb|EEU18982.1| deoxyadenosine kinase [Lactobacillus crispatus 125-2-CHN]
 gi|256713681|gb|EEU28670.1| deoxyadenosine kinase [Lactobacillus crispatus MV-1A-US]
 gi|260573563|gb|EEX30120.1| deoxyadenosine kinase [Lactobacillus crispatus MV-3A-US]
 gi|290922090|gb|EFD99090.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1]
 gi|295031958|emb|CBL51437.1| Deoxyadenosine kinase [Lactobacillus crispatus ST1]
 gi|310894566|gb|EFQ43640.1| deoxyadenosine kinase [Lactobacillus crispatus CTV-05]
          Length = 215

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 52/166 (31%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDNNP------------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD----------SSYAYQGERDSSQHLF 116
              +     L+H    I  A+ E   +  DR +            S              
Sbjct: 53  --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109

Query: 117 LDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           LD++ E +       PD  I + + +D  L R++ R    E    D
Sbjct: 110 LDNMMEDTPGNPSKKPDLLIYIHVSLDTMLNRIKKRGRSFEQISTD 155


>gi|300860404|ref|ZP_07106491.1| shikimate kinase [Enterococcus faecalis TUSoD Ef11]
 gi|295112989|emb|CBL31626.1| shikimate kinase [Enterococcus sp. 7L76]
 gi|300849443|gb|EFK77193.1| shikimate kinase [Enterococcus faecalis TUSoD Ef11]
 gi|315144411|gb|EFT88427.1| shikimate kinase [Enterococcus faecalis TX2141]
 gi|315160439|gb|EFU04456.1| shikimate kinase [Enterococcus faecalis TX0645]
          Length = 168

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 41/198 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT    L   L+  + D                   L+           E    AA
Sbjct: 11  GAGKTTIGQSLANKLKMSHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E  +   L +   +L            G            L+            
Sbjct: 56  FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I L    +  LKR++     +    ++   ++ + + E R+  + + A+        +D+
Sbjct: 97  IYLHATPEELLKRIKEDTENQRPLAIERSSKEIIALFESRKNFYEECAKM------TIDT 150

Query: 194 A-HSFQSVATNILNIVWE 210
                + +   IL  + E
Sbjct: 151 TNRLPEEIINEILQQLKE 168


>gi|187922748|ref|YP_001894390.1| deoxynucleoside kinase [Burkholderia phytofirmans PsJN]
 gi|187713942|gb|ACD15166.1| putative deoxynucleoside kinase [Burkholderia phytofirmans PsJN]
          Length = 226

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G GKT+    L +    +     +   P   P  E             +   
Sbjct: 19  YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLERFYR-----DTARYALP 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
            +   FA  R    ++V   A   G  L+ D F+   +  +A    ++    L+      
Sbjct: 70  TQLH-FALQRAQQAQDV-SAAHASGTPLVAD-FMTQKNDIFARLTLQEDEWQLYRALAAR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           I V    PD  + L    ++   R+Q R    E    D +
Sbjct: 127 IDVNAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166


>gi|10566934|dbj|BAB16044.1| similar to Lactobacillus acidophilus dA/dG-kinase [Streptococcus
           equi subsp. zooepidemicus]
          Length = 205

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 51/225 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK++  + L   L     +V         P  +                +  A +   
Sbjct: 2   GAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DPKKYAFLLQI 47

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL------DSLQE 122
             L+     I+ A      +L DR +       +  Y+    +   L +      + L+E
Sbjct: 48  FFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQELLANMLEE 106

Query: 123 IS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-----MIHEKRRQI 176
           +  + +  PD  I +D+  +  L+R++ R           FE+ D        + +    
Sbjct: 107 LEGMPKKRPDLLIYIDVSFEKMLERIEKRGR--------RFEQVDDNPDLEAYYHQVHGE 158

Query: 177 F---LDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213
           +    +     P     +D        + + +AT +L ++ E ++
Sbjct: 159 YPTWYERYDVSPK--MRIDGNKLDFVQNPEDLAT-VLQMIDEKLK 200


>gi|256810084|ref|YP_003127453.1| Adenylate kinase [Methanocaldococcus fervens AG86]
 gi|256793284|gb|ACV23953.1| Adenylate kinase [Methanocaldococcus fervens AG86]
          Length = 177

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 68/211 (32%), Gaps = 56/211 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GKTT   +L          V    E          +H L +   +E  +  
Sbjct: 3   IAITGTPGVGKTTVSKVLGNKF---GIKVIDITE-------AVKKHKLYTEKDEEMDSYV 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                     + +EN I+    + K+++ D  +                           
Sbjct: 53  IDF-------EKLENFIKEIEEKEKVIILDGHV-------------------------SH 80

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-P 185
            + PD TI+L    +I  +R++ R    +             + E  +   LD+   +  
Sbjct: 81  LLNPDYTIVLRCNPEIIKERLEKRGYKPKK------------VLENIQAEILDVCLCESK 128

Query: 186 DRCHIVDSA-HSFQSVATNILNIVWELVQKR 215
            + + +D+     + + + I+  +    +++
Sbjct: 129 GKIYEIDTTGRDVEDIVSEIIEAIKNKKERK 159


>gi|159896875|ref|YP_001543122.1| deoxynucleoside kinase-like [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889914|gb|ABX02994.1| Deoxynucleoside kinase-like [Herpetosiphon aurantiacus ATCC 23779]
          Length = 203

 Score = 48.9 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 57/161 (35%), Gaps = 14/161 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLL---KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           G  I+  G  G GKTT   LL   +RF       V     P     A+  +   L+   D
Sbjct: 2   GKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHV---ERPFQQLFAQNLQRYALANQFD 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE   F   R      V    L E   +    F      +QG   +++      L
Sbjct: 59  YLLLRAEQERFI--RAQSGIGVQDGGLDEDFWVFTQHFQ-----HQGYLSAAEFELCQRL 111

Query: 121 Q-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             E+      PD  I LD P+D+ ++R + R    E A  D
Sbjct: 112 YTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRD 152


>gi|116310888|emb|CAH67828.1| B0616E02-H0507E05.4 [Oryza sativa Indica Group]
          Length = 243

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 48/218 (22%)

Query: 6   FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI+F  G  G+GK T    +        L     D+  +    G+   E   +++    +
Sbjct: 60  FIAFVLGGPGSGKGTQCVRIASDFGFAHLSAG--DLLRSEISTGSEKGELILNIIKEGKI 117

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                            +    +IR A+   + K +L D F          R     +  
Sbjct: 118 VP--------------SEITVELIRKAMESSDAKRVLIDGF---------PRCEENRIAF 154

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173
           + +         PD  I  D P D  +KR+  R   R    ++   +K + + E      
Sbjct: 155 ERIT-----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 208

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +         + H +++  + + +   +  +   L
Sbjct: 209 VDYYTSR-----GKVHKINATGTEEEIFGAVHKLFSSL 241


>gi|218295702|ref|ZP_03496498.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23]
 gi|218243861|gb|EED10388.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23]
          Length = 202

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 76/223 (34%), Gaps = 30/223 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63
           ++I+  G  G+GK+T  +LL                 G  P  EA      L     +  
Sbjct: 1   MYIAIAGNIGSGKSTLTALLAEAF-------------GLKPVYEAVSENPYLEDFYRDMA 47

Query: 64  AEAEA--IVFAAAR-LDHVENVI-RPALMEGKILLCDRFLDS-SYAYQGERDSSQHL-FL 117
           + A    + F A R   H+  V   P +++ + +  D F+ + +   +G         ++
Sbjct: 48  SYAFHSQVFFLARRVRQHLLEVNGNPRVVQDRTVYEDAFVFAKNLHREGFLSRRDWETYM 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D  Q +S     PD  I L   +     R+  R    E    D               ++
Sbjct: 108 DLFQSVSSALRKPDLLIYLRASLPTLKARIAKRGRPFERQIPD-------SYLLSLNALY 160

Query: 178 LDIARNQP-DRCHIVDSAHSFQSVATNI-LNIVWELVQKRVSP 218
            D+  +       +V++      V        + E +++R+ P
Sbjct: 161 EDLMASWDLSPVEVVEADR-LDFVEREEDRMALLEALKRRLGP 202


>gi|125559227|gb|EAZ04763.1| hypothetical protein OsI_26926 [Oryza sativa Indica Group]
          Length = 261

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 62/207 (29%), Gaps = 45/207 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 31  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFL----DSSYAYQGERDSSQHLFLDSLQEISVQ 126
                      +I   + EGKI+  +  +    D+    + ++        +     + +
Sbjct: 71  ----------TMIENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFE 120

Query: 127 E---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180
               + P   +  D   +   +R+  R   R    ++   ++  +  E      + +   
Sbjct: 121 NVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHY--- 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
             N  D+   +D+A     V  ++  I
Sbjct: 178 --NAKDKVKKIDAAKPISEVFEDVKAI 202


>gi|52142943|ref|YP_083886.1| hypothetical protein BCZK2297 [Bacillus cereus E33L]
 gi|51976412|gb|AAU17962.1| conserved hypothetical protein; possible uridine kinase [Bacillus
           cereus E33L]
          Length = 186

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 35/212 (16%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLINS-------------------KALYFDSYH 41

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A+   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 42  FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IIVDYPFAY 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L     Q +  D TI +D P+DI + R   R    E+    + + K  + +   R+ +L+
Sbjct: 92  LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEIHNDLKHYITYA--RKGYLE 147

Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
                +P+   ++D + S   +   I   ++ 
Sbjct: 148 ALHTVKPNSDIVLDGSLSVDEIINQIEEELYR 179


>gi|84516269|ref|ZP_01003629.1| glycosyltransferase, group 1 [Loktanella vestfoldensis SKA53]
 gi|84509965|gb|EAQ06422.1| glycosyltransferase, group 1 [Loktanella vestfoldensis SKA53]
          Length = 632

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 64/219 (29%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------ 54
           MN    +   G +G+GKTT    L   LQ +            +      R  L      
Sbjct: 1   MNR--LVCIIGTDGSGKTTLSDALVERLQGRGERARRVWLGSESYLMAPVRAALKLVWDR 58

Query: 55  -------------LSCGVDEFGAEAEAIVFAAARL---------------DHVENVIRPA 86
                        L+    ++ AE       AAR                     + R  
Sbjct: 59  RRGKGKSHGPKPGLASQRVDYAAEIAQKNALAARHPFAVRVYLAMVWFDYWLQLWIKRLG 118

Query: 87  LMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145
           L +   ++ DR+L       G     S    +   Q    +  +P+  + L +  ++ + 
Sbjct: 119 LRDAGTIVADRYLFDVAVNVGLALGWSPEEVVRYAQTQICRIPLPEVRVFLRVEPEVSMA 178

Query: 146 RVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIARN 183
           R  + + +      L Y++          R   L IA N
Sbjct: 179 RKDDVFDIHYVRMRLHYYDAIAEAFGFTVRDGTLPIAEN 217


>gi|220918910|ref|YP_002494214.1| deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956764|gb|ACL67148.1| deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 215

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 52/173 (30%), Gaps = 41/173 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    +I+ EG  G GKTT   +L   L  +     V  E    P   A           
Sbjct: 1   MERPRYIAVEGPIGVGKTTLAQVLAERLGAR----LVLEEAESNPFLPA----------- 45

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYA-YQGERDSS-- 112
                     F A R  H        L+        +   D F  S+ A Y   +D    
Sbjct: 46  ----------FYADRKKHAFQAQVFFLLSRFQQQQVLFQQDLFSSSTVADYLFAKDRIFA 95

Query: 113 -------QHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                  +      + E +  + V PD  I L    D+ L R++ R    E  
Sbjct: 96  TLTLEPAELALYRQIHELLGPRVVRPDLVIYLQARTDVLLSRIRKRGRDFERG 148


>gi|315230267|ref|YP_004070703.1| FtsY-like signal recognition particle receptor protein subunit
           alpha [Thermococcus barophilus MP]
 gi|315183295|gb|ADT83480.1| FtsY-like signal recognition particle receptor protein, alpha
           subunit [Thermococcus barophilus MP]
          Length = 300

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GKTT I+ L  +L++      +      T  A A   V         G + 
Sbjct: 107 IVFVGFNGSGKTTTIAKLAHWLKKHGLSSVIAA--SDTFRAGAIEQV--EEHARRVGVKV 162

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R+      +D +++I  
Sbjct: 163 IKHRYGADPAAVAYDAIQHAKARGVDVVLVD---------TAGRNELNRNLMDEMKKIV- 212

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 213 RVTKPDLVIF 222


>gi|320335404|ref|YP_004172115.1| deoxynucleoside kinase [Deinococcus maricopensis DSM 21211]
 gi|319756693|gb|ADV68450.1| deoxynucleoside kinase [Deinococcus maricopensis DSM 21211]
          Length = 203

 Score = 48.9 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 21/159 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +++  EG  G GKT+    L      +     V   P      E                
Sbjct: 1   MYVVVEGPIGVGKTSLSRRLAARYGARLNLEIVEENPFLARFYEQ--------------P 46

Query: 65  EAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--D 118
           +A A      F  +R   +  + +  L   + ++ D   D  + +           L  D
Sbjct: 47  DAYAFQVQVFFLLSRFKQLAGIAQGELFA-EDVVSDYLFDKDFIFAAMNLRDDEFALYQD 105

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               +  +   PD  + L    D+ L R+  R    E+ 
Sbjct: 106 LYTHLRPRLPQPDLVVYLRADTDVLLSRIAMRGRPFEAD 144


>gi|257871003|ref|ZP_05650656.1| deoxynucleoside kinase [Enterococcus gallinarum EG2]
 gi|257805167|gb|EEV33989.1| deoxynucleoside kinase [Enterococcus gallinarum EG2]
          Length = 214

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 58/237 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++  +LL   L                  ++A    +    V       
Sbjct: 4   IVLAGTIGAGKSSLTALLADHL-----------------GSQAFYESIDDNEVLPLFYAD 46

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112
               A +     L+   + I+ AL +   +L DR  + DS           A   E    
Sbjct: 47  PNKYAFLLQIYFLNKRFDSIKKALNDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVRVY 105

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             L  + L+E+  +  +  PD  + + +  +  L+R+  R            E + +   
Sbjct: 106 DDLLANMLEELPYAAHKKHPDLLVHIRVSFETMLERINKRGR----------EYEQLSFD 155

Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH-----SFQSVATNILNIVWELVQK 214
                 + ++                  +D          ++ A  +L +V E + K
Sbjct: 156 PTLYDYYQELNLRYDQWYEEYQESPKIQIDGDQFNFVEDPEA-AQKVLAMVDEALAK 211


>gi|197124130|ref|YP_002136081.1| deoxynucleoside kinase [Anaeromyxobacter sp. K]
 gi|196173979|gb|ACG74952.1| deoxynucleoside kinase [Anaeromyxobacter sp. K]
          Length = 215

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 52/173 (30%), Gaps = 41/173 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    +I+ EG  G GKTT   +L   L  +     V  E    P   A           
Sbjct: 1   MERPRYIAVEGPIGVGKTTLAQVLAERLGAR----LVLEEAESNPFLPA----------- 45

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYA-YQGERDSS-- 112
                     F A R  H        L+        +   D F  S+ A Y   +D    
Sbjct: 46  ----------FYADRKKHAFQAQVFFLLSRFQQQQVLFQQDLFSSSTVADYLFAKDRIFA 95

Query: 113 -------QHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                  +      + E +  + V PD  I L    D+ L R++ R    E  
Sbjct: 96  TLTLEPAELALYRQIHELLGPRVVRPDLVIYLQARTDVLLSRIKKRGRDFERG 148


>gi|56692704|ref|YP_164162.1| deoxynucleoside kinase [Singapore grouper iridovirus]
 gi|42517416|gb|AAS18082.1| deoxynucleoside kinase [Singapore grouper iridovirus]
          Length = 191

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 50/224 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     IS  G  GAGK++ ++ L     ++ Y     +    T         L      
Sbjct: 1   MALPFLISVSGNIGAGKSSLLAALA----KRGY---YVQPEDFTKWGPLFNLALAEPKRY 53

Query: 61  EFGAEAEAIVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSSY-----AY-QGERDSSQ 113
           +F ++ + ++     + +H  N  RP      +++ +R  D        AY  G     +
Sbjct: 54  KFSSQLKILMVQMDLQREH-RNGTRP------LVILERASDCVLGFGKVAYDMGLMHVEE 106

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +  L+ +   +  +   D  I+LD P D+   R+ NR         D          +  
Sbjct: 107 YRMLEDIH--AKLDAKVDLKILLDTPPDVCRVRIGNR---------DR------EFEQAI 149

Query: 174 RQIFLDIARNQPDRCHIVDSAH-------SFQSVATNILNIVWE 210
              +L     Q      +D+A          + V  N + ++ +
Sbjct: 150 SNEYLTALHAQ-----FIDAADVKLSGLPPKEEVVENFIKLLAQ 188


>gi|154497977|ref|ZP_02036355.1| hypothetical protein BACCAP_01957 [Bacteroides capillosus ATCC
           29799]
 gi|150272967|gb|EDN00124.1| hypothetical protein BACCAP_01957 [Bacteroides capillosus ATCC
           29799]
          Length = 203

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 67/213 (31%), Gaps = 42/213 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  I   G  G GK+T I+ L    +   + V   TR P    A     + +     +
Sbjct: 7   TRGQLIVLSGPSGVGKSTVIAELLGERKDIYFSVSFTTRNPRVGEADGVNYNFVSREEFE 66

Query: 61  EFGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              A  E + +A    ++      VI+  L  G  +L D         QG          
Sbjct: 67  RMIAADELLEYAQYVGNYYGTSLKVIQDKLAAGIDVLLD------IEVQGAAK------- 113

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                  V+   P+  +I  +P   +   +R+  R +  E               +K R+
Sbjct: 114 -------VRSKCPEAVLIFIIPPSFEELSRRLHGRATDNEDVIAGRL--------QKARE 158

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  I         +V+       V+T    I+
Sbjct: 159 EYQQIPNYD---YLVVN-----DKVSTAAEEII 183


>gi|323467488|gb|ADX71175.1| Deoxyadenosine kinase [Lactobacillus helveticus H10]
          Length = 215

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     L+H    I  A+ +   +  DR  + D+ +    A     D ++    D L
Sbjct: 53  --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            E  +++        PD  I + + +D  L R++ R    E    D
Sbjct: 110 LENMIEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 155


>gi|254482523|ref|ZP_05095762.1| Deoxynucleoside kinase subfamily protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037214|gb|EEB77882.1| Deoxynucleoside kinase subfamily protein [marine gamma
           proteobacterium HTCC2148]
          Length = 199

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 16/153 (10%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
           GKTT    L      +     +  E    P  E            +  A A  + F   R
Sbjct: 2   GKTTLTKRLATTFNYQ----TLLEEAEQNPFLEKFYR------NRQQAALATQLFFLFQR 51

Query: 76  LDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
              ++++ +  + E  + + D FL   D  +A          L+    +++++    PD 
Sbjct: 52  AQKIQDLRQADIFEP-VRVAD-FLIEKDPLFARINLDREEFQLYQKVYEQLTIDAPKPDL 109

Query: 133 TIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164
            I L    D+ L R+ +R    E     DY ER
Sbjct: 110 VIYLQASTDVLLSRINSRGIAVEQGIERDYLER 142


>gi|6683813|gb|AAF23372.1|AF187063_1 UMP/CMP kinase b [Oryza sativa Japonica Group]
          Length = 210

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 63/207 (30%), Gaps = 45/207 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 31  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFL----DSSYAYQGERDSSQHLFLDSLQEISVQ 126
                      +I   + EGKI+  +  +    D+    + ++        +     + +
Sbjct: 71  ----------TMIENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFE 120

Query: 127 E---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180
               + P   +  D   +   +R+  R   R    ++   ++  +  E      + +   
Sbjct: 121 NVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHY--- 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
             N  ++   +D+A S   V  ++  I
Sbjct: 178 --NAKNKVKKIDAAKSISEVFEDVKAI 202


>gi|257387782|ref|YP_003177555.1| cytidylate kinase [Halomicrobium mukohataei DSM 12286]
 gi|257170089|gb|ACV47848.1| cytidylate kinase [Halomicrobium mukohataei DSM 12286]
          Length = 192

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 38/171 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G+GK+T  + L   L    YD             +  R +           
Sbjct: 1   MLITVSGPAGSGKSTLAANLAEKL---GYDHV--------SGGDIFRSL----------- 38

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                  A  R   +  + + A  + +I   DR LD        R+    +    L    
Sbjct: 39  -------AEERGVSLVELNQQAESDDQI---DRDLDRRL-RSTAREEDDLVLESRLAGWM 87

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHE 171
             +   D  + LD P+D+  +R+ +R     +   D      E + +   E
Sbjct: 88  AGDHA-DLKLWLDAPLDVRAERIADREEKSVTEARDETQARAESEGLRYQE 137


>gi|222637488|gb|EEE67620.1| hypothetical protein OsJ_25184 [Oryza sativa Japonica Group]
          Length = 222

 Score = 48.5 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 61/211 (28%), Gaps = 53/211 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 31  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70

Query: 71  FAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                      +I   + EGKI+        L D    +    + ++        +    
Sbjct: 71  ----------TMIENMIKEGKIVPSEVTIKLLQD----AMIKNENDKFLIDGFPRNEENR 116

Query: 123 ISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQI 176
            + +    + P   +  D   +   +R+  R   R    ++   ++  +  E      + 
Sbjct: 117 AAFENVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEH 176

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
           +     N  ++   +D+A     V  ++  I
Sbjct: 177 Y-----NAKNKVKKIDAAKPISEVFEDVKAI 202


>gi|322410956|gb|EFY01864.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 213

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 74/232 (31%), Gaps = 39/232 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     +V         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGNHL---GTEVFY-EAVDNNPVLDLYYQ----------NP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121
           +  A +     L+     I+ A      +L DR +     +      + ++    L+   
Sbjct: 47  KKYAFLLQIFFLNKRFKSIKEAYQSDNNIL-DRSIFEDELFLKLNYKNGNVTKTELEIYQ 105

Query: 122 ---------EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
                       + +  PD  I +D+  +  L+R++NR    E    +   E+     + 
Sbjct: 106 ELLENMLEELEGMPKKRPDLLIYIDVSFEKMLERIENRGRSFEQVRNNPELEQ----YYH 161

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
           +  + +     +    P     +D   S   V   + L  V ++V  ++  L
Sbjct: 162 QVHEEYPTWYEDYKVSPK--MKIDGN-SLDFVKNPDDLATVLQMVDDKLKEL 210


>gi|146345494|sp|Q58933|PSTK_METJA RecName: Full=L-seryl-tRNA(Sec) kinase; AltName:
           Full=O-phosphoseryl-tRNA(Sec) kinase; Short=PSTK
          Length = 248

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 68/211 (32%), Gaps = 51/211 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61
           + I   G+ G GK+T    L + L + N DV V         ++  R    V      + 
Sbjct: 1   MLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEF 53

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++ +A              ++   ++ D   D++Y Y   R    ++     +
Sbjct: 54  IKKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSMRRDLINIAKKYNK 95

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++        I L   +D+ ++R   R            E+    + +K  + F +  
Sbjct: 96  NYAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKMYEKFDEPG 136

Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210
           +     +   I+D+          I   + E
Sbjct: 137 KKYKWDEPFLIIDTTKDID--FNEIAKKLIE 165


>gi|15669733|ref|NP_248546.1| chromatin associated protein KTI12 [Methanocaldococcus jannaschii
           DSM 2661]
 gi|1592169|gb|AAB99557.1| Yeast KTI12 Protein [Methanocaldococcus jannaschii DSM 2661]
          Length = 252

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 68/211 (32%), Gaps = 51/211 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61
           + I   G+ G GK+T    L + L + N DV V         ++  R    V      + 
Sbjct: 5   MLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEF 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++ +A              ++   ++ D   D++Y Y   R    ++     +
Sbjct: 58  IKKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSMRRDLINIAKKYNK 99

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++        I L   +D+ ++R   R            E+    + +K  + F +  
Sbjct: 100 NYAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKMYEKFDEPG 140

Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210
           +     +   I+D+          I   + E
Sbjct: 141 KKYKWDEPFLIIDTTKDID--FNEIAKKLIE 169


>gi|310821027|ref|YP_003953385.1| deoxynucleoside kinase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394099|gb|ADO71558.1| Deoxynucleoside kinase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 204

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 59/187 (31%), Gaps = 29/187 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+  G  GAGKT   S L R      YD+    EP             L+    
Sbjct: 1   MARKKFIAVAGNIGAGKTELTSFLCRK-----YDLTPYFEPNDQNP-------YLAPFYK 48

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQ 113
           +   +  A       L H   + R        +L DR  + D+     +   Q   D   
Sbjct: 49  DM--KTWAFRSQIFFLTHKFRLHRELERHSGTVLQDRTIYEDAEIFAKNLHRQRFIDRRD 106

Query: 114 HLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                 L E   Q +  PD  I L  PV    +R++ R    E           V   ++
Sbjct: 107 WQTYRELYETIAQALSPPDLMIYLRCPVQTLRERIRLRGRSMEKDIP-------VAYLKR 159

Query: 173 RRQIFLD 179
              ++ +
Sbjct: 160 LNALYEE 166


>gi|301774204|ref|XP_002922516.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial-like isoform 2 [Ailuropoda
           melanoleuca]
          Length = 343

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 53/252 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58
             I+ +G   +GK      +   L  K++          T     A  +  S        
Sbjct: 46  KVITVDGNICSGKGKLAKEIAEKLGLKHFPEAGVHYADSTTGDGRALDLEFSGSCSVEKF 105

Query: 59  ------VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106
                  D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      Q
Sbjct: 106 YDDPRSNDGHSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMYSQ 164

Query: 107 GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           G          + +++++++E + P   + +D+PV     R+Q + +  E          
Sbjct: 165 GFIRKQCVDHYNEVKKVTIREYLPPHVVVYIDVPVPEIQSRIQKKGNPHE---------- 214

Query: 166 DVMIHEKRRQIFLDIARNQ---------PDRCHIV--DS--AHSFQSVATNILNIVWELV 212
                 K    +L    N           ++C ++  ++  A   + V  +I     E +
Sbjct: 215 -----MKITSGYLQDIENSYKKNFLPEMSEKCEVLQYNAREAQDAEKVVEDI-----EYL 264

Query: 213 QKRVSPLSSKKD 224
           +    P   + D
Sbjct: 265 KYNKGPWLEQSD 276


>gi|222628242|gb|EEE60374.1| hypothetical protein OsJ_13512 [Oryza sativa Japonica Group]
          Length = 281

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 48/213 (22%)

Query: 6   FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI+F  G  G+GK T    +        L     D+  +    G+   E   +++    +
Sbjct: 60  FIAFVLGGPGSGKGTQCVRIASDFGFAHLSAG--DLLRSEISTGSEKGELILNIIKEGKI 117

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                            +    +IR A+   + K +L D F          R     +  
Sbjct: 118 VP--------------SEITVELIRKAMESSDAKRVLIDGF---------PRCEENRIAF 154

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173
           + +         PD  I  D P D  +KR+  R   R    ++   +K + + E      
Sbjct: 155 ERIT-----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 208

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
              +         + H +++  + + +   +  
Sbjct: 209 VDYYTSR-----GKVHKINATGTEEEIFGAVHK 236


>gi|300811212|ref|ZP_07091719.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497799|gb|EFK32814.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|325685064|gb|EGD27199.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 232

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 49/231 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++  ++L ++L             G  P  E+     +L     +    
Sbjct: 4   IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
              + +F      H    I+ AL +   +L DR  + DS + +     G  +  +    D
Sbjct: 51  TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYD 106

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
            L E  ++E+       PD  + +++  +  ++R+Q R    E    D   E      ++
Sbjct: 107 ELLESMMKELERMPKRHPDLLVHINVSYETMIRRIQKRGRSYEQLSFDPTLE----DYYK 162

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +  + +     +    P    ++D  H            V   I   + ++
Sbjct: 163 RMLRYYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211


>gi|260665191|ref|ZP_05866040.1| deoxynucleoside kinase [Lactobacillus jensenii SJ-7A-US]
 gi|260560928|gb|EEX26903.1| deoxynucleoside kinase [Lactobacillus jensenii SJ-7A-US]
          Length = 224

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 51/218 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I   G  GAGK++  S+L ++L             G  P  E+   + +L     +    
Sbjct: 5   IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 51

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
           A  + +F      H    I+ AL +   +L DR  + DS + +     G     +    D
Sbjct: 52  AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 107

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166
            L +  ++E+       PD  + +D+  +  +KR+Q R   RE   LDY    E   ++ 
Sbjct: 108 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 165

Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVD 192
           +  +E   + +            LD   ++ DR  ++D
Sbjct: 166 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDRQEVLD 203


>gi|161508200|ref|YP_001578171.1| deoxyadenosine kinase [Lactobacillus helveticus DPC 4571]
 gi|160349189|gb|ABX27863.1| Deoxyadenosine kinase [Lactobacillus helveticus DPC 4571]
          Length = 225

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 15  IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     L+H    I  A+ +   +  DR  + D+ +    A     D ++    D L
Sbjct: 63  --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 119

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            E  +++        PD  I + + +D  L R++ R    E    D
Sbjct: 120 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 165


>gi|322511332|gb|ADX06641.1| hypothetical protein 162281036 [Organic Lake phycodnavirus]
          Length = 217

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 80/215 (37%), Gaps = 24/215 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDE 61
             IS EG  G+GK+T +  LK+ L  +N  +    EP     +   E    +L      +
Sbjct: 13  KIISIEGNIGSGKSTFLDFLKKSL--QNPRICFLDEPIQEWNSVVDEHGVTILEKFYESK 70

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD- 118
             A +  ++   +RL  +   I+    +  I++ +R    D +   Q   DS     ++ 
Sbjct: 71  SYAFSFQMMAYISRLSMLTKAIKS--KKYDIIITERGLGTDKNVFCQMLYDSKSICKIEY 128

Query: 119 --SLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
               +     ++      + L    D+  KR+  R    ES     +  K    HEK   
Sbjct: 129 TIYNKWFDEFKIKEHIHYVYLKTTPDVSHKRIMIRNRKGESNMAMSYVNKCHDYHEK--- 185

Query: 176 IFLDIARNQPDRCHIVDSA--HSFQSVATNILNIV 208
               +++ +   C ++D+   +  + +   +   V
Sbjct: 186 ---WLSKVE---CLVLDANPENDPKELHLKLKEFV 214


>gi|139472981|ref|YP_001127696.1| putative deoxyadenosine kinase protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134271227|emb|CAM29443.1| putative deoxyadenosine kinase protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 213

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 47  KKYAFLLQIYFLNKRFKSIKEAYRADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211
           +    +     +    P     +D              +V   I   + EL
Sbjct: 162 QVHSEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210


>gi|73542464|ref|YP_296984.1| deoxynucleoside kinase [Ralstonia eutropha JMP134]
 gi|72119877|gb|AAZ62140.1| Deoxynucleoside kinase [Ralstonia eutropha JMP134]
          Length = 214

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 63/200 (31%), Gaps = 36/200 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G+GKT+    L   L       H    P G  +                  + 
Sbjct: 8   IVVEGPVGSGKTSLAQRLAHTL-------HAAELPDGVRSNPFLERFYRDRARYALPLQL 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQHLFLDSL 120
             +   A +L       + AL  G+ ++       DR   S         +     L   
Sbjct: 61  ACLNKRADQLQQ----WQNALFAGQRMVSNFLIAKDRLYASL--------NLPEDELALY 108

Query: 121 QEISVQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             I+ +  +P    D  I+L     +  +R+  R    E+A +D          ++    
Sbjct: 109 DAIASRLQLPPQRTDLVIMLQATPSLLRERIARRGEPGEAAGID------EAYLQQLTDA 162

Query: 177 FLDIARNQPD-RCHIVDSAH 195
           + ++     +    IVD+AH
Sbjct: 163 YGELFHRYDEAPVLIVDTAH 182


>gi|115473457|ref|NP_001060327.1| Os07g0624700 [Oryza sativa Japonica Group]
 gi|6683811|gb|AAF23371.1|AF187062_1 UMP/CMP kinase a [Oryza sativa Japonica Group]
 gi|33146624|dbj|BAC79912.1| UMP/CMP kinase a [Oryza sativa Japonica Group]
 gi|113611863|dbj|BAF22241.1| Os07g0624700 [Oryza sativa Japonica Group]
          Length = 210

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 62/207 (29%), Gaps = 45/207 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 31  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFL----DSSYAYQGERDSSQHLFLDSLQEISVQ 126
                      +I   + EGKI+  +  +    D+    + ++        +     + +
Sbjct: 71  ----------TMIENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFE 120

Query: 127 E---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180
               + P   +  D   +   +R+  R   R    ++   ++  +  E      + +   
Sbjct: 121 NVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHY--- 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
             N  ++   +D+A     V  ++  I
Sbjct: 178 --NAKNKVKKIDAAKPISEVFEDVKAI 202


>gi|301774202|ref|XP_002922515.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial-like isoform 1 [Ailuropoda
           melanoleuca]
          Length = 362

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 53/252 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58
             I+ +G   +GK      +   L  K++          T     A  +  S        
Sbjct: 65  KVITVDGNICSGKGKLAKEIAEKLGLKHFPEAGVHYADSTTGDGRALDLEFSGSCSVEKF 124

Query: 59  ------VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106
                  D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      Q
Sbjct: 125 YDDPRSNDGHSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMYSQ 183

Query: 107 GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           G          + +++++++E + P   + +D+PV     R+Q + +  E          
Sbjct: 184 GFIRKQCVDHYNEVKKVTIREYLPPHVVVYIDVPVPEIQSRIQKKGNPHE---------- 233

Query: 166 DVMIHEKRRQIFLDIARNQ---------PDRCHIV--DS--AHSFQSVATNILNIVWELV 212
                 K    +L    N           ++C ++  ++  A   + V  +I     E +
Sbjct: 234 -----MKITSGYLQDIENSYKKNFLPEMSEKCEVLQYNAREAQDAEKVVEDI-----EYL 283

Query: 213 QKRVSPLSSKKD 224
           +    P   + D
Sbjct: 284 KYNKGPWLEQSD 295


>gi|238855472|ref|ZP_04645782.1| deoxyguanosIne kinase [Lactobacillus jensenii 269-3]
 gi|282932160|ref|ZP_06337610.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1]
 gi|313472751|ref|ZP_07813239.1| deoxyguanosine kinase [Lactobacillus jensenii 1153]
 gi|238831962|gb|EEQ24289.1| deoxyguanosIne kinase [Lactobacillus jensenii 269-3]
 gi|281303700|gb|EFA95852.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1]
 gi|313448861|gb|EEQ68275.2| deoxyguanosine kinase [Lactobacillus jensenii 1153]
          Length = 223

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 51/218 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I   G  GAGK++  S+L ++L             G  P  E+   + +L     +    
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 50

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
           A  + +F      H    I+ AL +   +L DR  + DS + +     G     +    D
Sbjct: 51  AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 106

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166
            L +  ++E+       PD  + +D+  +  +KR+Q R   RE   LDY    E   ++ 
Sbjct: 107 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 164

Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVD 192
           +  +E   + +            LD   ++ DR  ++D
Sbjct: 165 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDRQEVLD 202


>gi|218194202|gb|EEC76629.1| hypothetical protein OsI_14565 [Oryza sativa Indica Group]
          Length = 282

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 48/213 (22%)

Query: 6   FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI+F  G  G+GK T    +        L     D+  +    G+   E   +++    +
Sbjct: 61  FIAFVLGGPGSGKGTQCVRIASDFGFAHLSAG--DLLRSEISTGSEKGELILNIIKEGKI 118

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                            +    +IR A+   + K +L D F          R     +  
Sbjct: 119 VP--------------SEITVELIRKAMESSDAKRVLIDGF---------PRCEENRIAF 155

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173
           + +         PD  I  D P D  +KR+  R   R    ++   +K + + E      
Sbjct: 156 ERIT-----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 209

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
              +         + H +++  + + +   +  
Sbjct: 210 VDYYTSR-----GKVHKINATGTEEEIFGAVHK 237


>gi|19745297|ref|NP_606433.1| hypothetical protein spyM18_0121 [Streptococcus pyogenes MGAS8232]
 gi|21909630|ref|NP_663898.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I)subunit
           [Streptococcus pyogenes MGAS315]
 gi|28895008|ref|NP_801358.1| hypothetical protein SPs0096 [Streptococcus pyogenes SSI-1]
 gi|56807746|ref|ZP_00365609.1| COG1428: Deoxynucleoside kinases [Streptococcus pyogenes M49 591]
 gi|209558682|ref|YP_002285154.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Streptococcus pyogenes
           NZ131]
 gi|306828201|ref|ZP_07461462.1| deoxynucleoside kinase [Streptococcus pyogenes ATCC 10782]
 gi|19747396|gb|AAL96932.1| hypothetical protein spyM18_0121 [Streptococcus pyogenes MGAS8232]
 gi|21903812|gb|AAM78701.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I)subunit
           [Streptococcus pyogenes MGAS315]
 gi|28810253|dbj|BAC63191.1| hypothetical protein [Streptococcus pyogenes SSI-1]
 gi|209539883|gb|ACI60459.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Streptococcus pyogenes
           NZ131]
 gi|304429579|gb|EFM32627.1| deoxynucleoside kinase [Streptococcus pyogenes ATCC 10782]
          Length = 213

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 47  KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211
           +    +     +    P     +D              +V   I   + EL
Sbjct: 162 QVHGEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210


>gi|256851658|ref|ZP_05557046.1| deoxynucleoside kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260661625|ref|ZP_05862537.1| deoxynucleoside kinase [Lactobacillus jensenii 115-3-CHN]
 gi|256615616|gb|EEU20805.1| deoxynucleoside kinase [Lactobacillus jensenii 27-2-CHN]
 gi|260547682|gb|EEX23660.1| deoxynucleoside kinase [Lactobacillus jensenii 115-3-CHN]
          Length = 224

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 89/237 (37%), Gaps = 61/237 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I   G  GAGK++  S+L ++L             G  P  E+   + +L     +    
Sbjct: 5   IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 51

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
           A  + +F      H    I+ AL +   +L DR  + DS + +     G     +    D
Sbjct: 52  AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 107

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166
            L +  ++E+       PD  + +D+  +  +KR+Q R   RE   LDY    E   ++ 
Sbjct: 108 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 165

Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  +E   + +            LD   ++ DR          Q V   I+  + E+
Sbjct: 166 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDR----------QEVLDTIIAKLKEM 212


>gi|225717844|gb|ACO14768.1| UMP-CMP kinase [Caligus clemensi]
          Length = 194

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 38/211 (18%)

Query: 11  GIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  GAGK T  + +              +   R+  G+   E   H +++  +       
Sbjct: 11  GGPGAGKGTQCAKIVAKYGFVHLSAGDLLRAERQKEGSEYGELIEHHIVNGTIVPP---- 66

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                 A     ++N I  +          RFL   +       S+   +  S+  +   
Sbjct: 67  ------AITCALLKNAILSSSS------SKRFLIDGF---PRNQSNVDEWEKSVSPLVQF 111

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-----IA 181
           + +    +  D   +I ++R  NR +       D  E       +KR   +++     I 
Sbjct: 112 KFL----LFFDCSEEICVQRCLNRGAAGSGRSDDNLES-----LKKRIATYMNSTLGVIQ 162

Query: 182 RNQPDR-CHIVDSAHSFQSVATNILNIVWEL 211
             + D     VD++ S   V  ++  I  E+
Sbjct: 163 SYEKDNGVRRVDASRSVDEVFADVQKIFDEV 193


>gi|270014683|gb|EFA11131.1| hypothetical protein TcasGA2_TC004732 [Tribolium castaneum]
          Length = 198

 Score = 48.5 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 66/226 (29%), Gaps = 49/226 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  GAGK T    +        Y VH+        A +  R         
Sbjct: 1   MAKPKVIFVLGAPGAGKGTQCQKIVDNF---GY-VHL-------SAGDLLREERAKPDSK 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117
                                +I   + EGKI+   +      S      ++   +   +
Sbjct: 50  ------------------YGELIETYIREGKIVPVEI----TCSLLENAMKKSGKEKFLI 87

Query: 118 DSL--QEISVQE---VMPD-----CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           D     + ++      + D       +  D P ++ + R   R +       D  +  + 
Sbjct: 88  DGFPRNQNNLDGWNKTLADNVKLLFVLFFDCPKEVCVDRCLGRGAAGSGRSDDNMQSLEK 147

Query: 168 MIHEKRRQIFLDIARNQPDRCHI--VDSAHSFQSVATNILNIVWEL 211
             +   ++    I +   +R  +  +D+  + + V   +  +  E+
Sbjct: 148 RFNTFTQET-QPIVKYYEERGLVRNIDATKAPEDVFGRVKEVFTEV 192


>gi|261824790|pdb|3A4L|A Chain A, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec)
           Kinase
 gi|261824791|pdb|3A4L|B Chain B, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec)
           Kinase
 gi|261824792|pdb|3A4M|A Chain A, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec)
           Kinase
 gi|261824793|pdb|3A4M|B Chain B, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec)
           Kinase
 gi|261824794|pdb|3A4N|A Chain A, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec)
           Kinase
 gi|261824795|pdb|3A4N|B Chain B, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec)
           Kinase
 gi|315583415|pdb|3AM1|A Chain A, Crystal Structure Of Protein
          Length = 260

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 68/211 (32%), Gaps = 51/211 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61
           + I   G+ G GK+T    L + L + N DV V         ++  R    V      + 
Sbjct: 5   MLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEF 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  ++ +A              ++   ++ D   D++Y Y   R    ++     +
Sbjct: 58  IKKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSMRRDLINIAKKYNK 99

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++        I L   +D+ ++R   R            E+    + +K  + F +  
Sbjct: 100 NYAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKMYEKFDEPG 140

Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210
           +     +   I+D+          I   + E
Sbjct: 141 KKYKWDEPFLIIDTTKDID--FNEIAKKLIE 169


>gi|14591436|ref|NP_143516.1| signal recognition particle protein [Pyrococcus horikoshii OT3]
 gi|3258098|dbj|BAA30781.1| 326aa long hypothetical signal recognition particle protein
           [Pyrococcus horikoshii OT3]
          Length = 326

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GKTT I+ L  +L++  + V +      T  A A     L     + G + 
Sbjct: 130 ILFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQ--LEEHAKKVGVKV 185

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R  +    +D +++I+ 
Sbjct: 186 IKHKYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKIA- 235

Query: 126 QEVMPDCTII 135
           +   P+  I 
Sbjct: 236 RVTKPNLVIF 245


>gi|322787338|gb|EFZ13450.1| hypothetical protein SINV_04831 [Solenopsis invicta]
          Length = 221

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 31/206 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGKTT  + L        +   ++RE             LL   V         + 
Sbjct: 36  GGPGAGKTTQCTRLAEHY---GFCTIISRE-------------LLRNEVTTGSQRGVILA 79

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           +  +    V   +   L++ K+      L+S    +G   S         Q  + Q   P
Sbjct: 80  YLMSEGKLVPADVMMELIKAKM------LNSLGTTRGFLLSGFPREKIQCQHFNRQIRPP 133

Query: 131 DCTIILDLPVDIGLKRVQNRY---SLRESACLDYFER-KDVMIHEKRRQIFLDIARNQPD 186
           D  + L +   + + R+  R    + R+   +D  E  + +  H +  +  L   + Q  
Sbjct: 134 DLVLYLYVRNSLLMDRILARAITATERQERGID--ENWRRIKEHSRMIKPILKYYKKQ-- 189

Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212
              I+D       V  +I N V  ++
Sbjct: 190 -LVIIDGEKDELEVFQDICNAVDNIL 214


>gi|91092694|ref|XP_971882.1| PREDICTED: similar to putative deoxynucleoside kinase [Tribolium
           castaneum]
 gi|270014809|gb|EFA11257.1| hypothetical protein TcasGA2_TC010791 [Tribolium castaneum]
          Length = 233

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 25/208 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +  EG  G GKTT ++  ++F      DV+V  EP          ++L          + 
Sbjct: 22  VIVEGNIGCGKTTFLNYFQQF-----DDVNVLAEPVNKWRNCNGYNLL---DKMYSDPKK 73

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDS-------SYAYQGERDSSQHLFLD 118
            +  F +     +  +    +  G  + L +R + S         A  G  + +    +D
Sbjct: 74  WSFTFQSYV--QLTILQHHTMKTGHPIKLMERSIYSARHCFVEQMARNGSIERASVSVMD 131

Query: 119 SLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175
              + + +  ++  D  + L    +   +R+  R    E    L+YF+     IH    +
Sbjct: 132 EWFKWAKENCDLSVDLIVYLKTTPETAYQRMLARNRPEEQYVPLEYFQ----DIHNLHEE 187

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATN 203
             L      P    I+D+      +   
Sbjct: 188 WLLQKRFECPAPVLIIDANLDKSGIMEE 215


>gi|253744290|gb|EET00516.1| Hypothetical protein GL50581_2239 [Giardia intestinalis ATCC 50581]
          Length = 360

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 6/103 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLSCGVDEF 62
           I  +G  GAGK+T    L  + + +   V V  E       +               + +
Sbjct: 66  IVVDGPIGAGKSTFCRKLAEYAREQALQVAVVEEAVALESFSAYGITLEEYYRDPHANAY 125

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
               +  V  A     +E        +  +++ DR+L S+ A+
Sbjct: 126 --RFQLAVTQALADQLMEYRYTDKYKDCDLVIFDRWLPSTSAF 166


>gi|241895223|ref|ZP_04782519.1| deoxyadenosine kinase [Weissella paramesenteroides ATCC 33313]
 gi|241871529|gb|EER75280.1| deoxyadenosine kinase [Weissella paramesenteroides ATCC 33313]
          Length = 217

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 18/163 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           I   G  GAGKT+  ++L   L  +       +  +               ++  L+  +
Sbjct: 2   IVLSGTIGAGKTSLTTMLAEHLGSEALYESVDDNPILPLFYEDPKRYGFLLQNYFLNKRL 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D       + +    R    E+++   L        DR   +    Q   D   ++ ++ 
Sbjct: 62  DNIKDAQGSQLNVIDRSI-FEDLLLFKLNAD----LDRATQTEV--QIYGDLLNNI-MEQ 113

Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           + + S   ++  PD  I + +  +  L+R++ R    E    D
Sbjct: 114 V-DFSDDAIVKTPDLLIYIHVSFETMLERIKKRGRDFEQIAND 155


>gi|28374307|gb|AAH45275.1| Cmpk1 protein [Xenopus laevis]
          Length = 227

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 61/217 (28%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    + +                   A +  R                   
Sbjct: 44  GGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----------- 81

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + +GKI+       L  R ++ + A+   +            D+
Sbjct: 82  -------QYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDN 134

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ          D    +  D   +  ++R   R      +  +    + +   EKR Q 
Sbjct: 135 LQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL---EKRIQT 188

Query: 177 FLD----IARNQPDR--CHIVDSAHSFQSVATNILNI 207
           +L     I      R     VD++ S   V T + NI
Sbjct: 189 YLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNI 225


>gi|290976726|ref|XP_002671090.1| adenylate kinase [Naegleria gruberi]
 gi|284084656|gb|EFC38346.1| adenylate kinase [Naegleria gruberi]
          Length = 736

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 53/228 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GK T   L+     +       T         +  R V+      E G + 
Sbjct: 536 IIIMGLPGCGKGTQSKLIAE---KYGLVHIST--------GDLVREVI--SKQTELGKKC 582

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR-----FLDSSYAYQGERDSSQHLFLDSLQ 121
           EAI+         + +I P       +  DR          +   G   ++ +L      
Sbjct: 583 EAIINTGGL--LPDELINP-------IFLDRILKEDCKTKGWILDGYPRTTSNLEFVRAN 633

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERK--D 166
            ++V        I L L  D  ++R   R +   +  +             +   ++  D
Sbjct: 634 RLNVTG-----VIFLTLDDDTAIERQCGRITDPLTGAIYHSKFLPPTEEIRERLVKRATD 688

Query: 167 VMIHEKRR-QIFLDIARN----QPDRC-HIVDSAHSFQSVATNILNIV 208
                K R +++ D         P+   H +D+  S + V   I  ++
Sbjct: 689 NEEKAKIRVKVYHDEMDQAFDWFPEEISHKIDATPSPEEVFEAIKKLL 736


>gi|313124771|ref|YP_004035030.1| deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312281334|gb|ADQ62053.1| Deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 232

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 49/231 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++  ++L ++L             G  P  E+     +L     +    
Sbjct: 4   IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
              + +F      H    I+ AL +   +L DR  + DS + +     G  +  +    D
Sbjct: 51  TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYD 106

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
            L E  ++E+       PD  + +++  +  ++R+Q R    E    D   E      ++
Sbjct: 107 ELLESMMKELERMPKRHPDLLVHINVSYETMIRRIQKRGRSYEQLSFDPTLE----DYYK 162

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +  + +     +    P    ++D  H            V   I   + ++
Sbjct: 163 RMLRCYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211


>gi|260101903|ref|ZP_05752140.1| deoxyadenosine kinase [Lactobacillus helveticus DSM 20075]
 gi|260084292|gb|EEW68412.1| deoxyadenosine kinase [Lactobacillus helveticus DSM 20075]
          Length = 215

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     L+H    I  A+ +   +  DR  + D+ +    A     D ++    D L
Sbjct: 53  --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            E  +++        PD  I + + +D  L R++ R    E    D
Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 155


>gi|282933308|ref|ZP_06338694.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1]
 gi|297205266|ref|ZP_06922662.1| deoxyguanosine kinase [Lactobacillus jensenii JV-V16]
 gi|281302604|gb|EFA94820.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1]
 gi|297149844|gb|EFH30141.1| deoxyguanosine kinase [Lactobacillus jensenii JV-V16]
          Length = 223

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 89/237 (37%), Gaps = 61/237 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I   G  GAGK++  S+L ++L             G  P  E+   + +L     +    
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 50

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
           A  + +F      H    I+ AL +   +L DR  + DS + +     G     +    D
Sbjct: 51  AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 106

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166
            L +  ++E+       PD  + +D+  +  +KR+Q R   RE   LDY    E   ++ 
Sbjct: 107 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 164

Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  +E   + +            LD   ++ DR          Q V   I+  + E+
Sbjct: 165 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDR----------QEVLDTIIAKLKEM 211


>gi|50913498|ref|YP_059470.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS10394]
 gi|71902767|ref|YP_279570.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS6180]
 gi|94987735|ref|YP_595836.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS9429]
 gi|94991603|ref|YP_599702.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus
           pyogenes MGAS2096]
 gi|94993506|ref|YP_601604.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus
           pyogenes MGAS10750]
 gi|50902572|gb|AAT86287.1| Deoxyadenosine kinase [Streptococcus pyogenes MGAS10394]
 gi|71801862|gb|AAX71215.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS6180]
 gi|94541243|gb|ABF31292.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS9429]
 gi|94545111|gb|ABF35158.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus
           pyogenes MGAS2096]
 gi|94547014|gb|ABF37060.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus
           pyogenes MGAS10750]
          Length = 229

 Score = 48.1 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV         P  +                
Sbjct: 17  MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 63  KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 121

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 122 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 177

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211
           +    +     +    P     +D              +V   I   + EL
Sbjct: 178 QVHGEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 226


>gi|22327339|ref|NP_198367.2| adenylate kinase family protein [Arabidopsis thaliana]
 gi|17979434|gb|AAL49859.1| putative adenylate kinase [Arabidopsis thaliana]
 gi|22136756|gb|AAM91697.1| putative adenylate kinase [Arabidopsis thaliana]
 gi|110740593|dbj|BAE98401.1| adenylate kinase -like protein [Arabidopsis thaliana]
 gi|332006553|gb|AED93936.1| adenylate kinase family protein [Arabidopsis thaliana]
          Length = 588

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 69/232 (29%), Gaps = 49/232 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   L+       +    D+       GT   + A+  +          +
Sbjct: 84  ISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFM---NSGSLVPD 140

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              I   A RL       R    E    L D F          R  +Q   LD L     
Sbjct: 141 EIVIAMVAGRL------SREDAKEHGW-LLDGF---------PRSFAQAQSLDKLN---- 180

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171
             V PD  I+LD+P +I + R   R     +  +                   +     E
Sbjct: 181 --VKPDIFILLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEE 238

Query: 172 KRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           K +   QI+      I     D    +D+    + V      ++ ++  KR+
Sbjct: 239 KVKARLQIYKQNSEAIISAYSDVMVKIDANRPKEVVFEETQTLLSQIQLKRM 290


>gi|296122301|ref|YP_003630079.1| guanylate kinase [Planctomyces limnophilus DSM 3776]
 gi|296014641|gb|ADG67880.1| guanylate kinase [Planctomyces limnophilus DSM 3776]
          Length = 206

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 46/214 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  G+GKTT               VH   E    P  +A           E   E 
Sbjct: 19  VVLSGPSGSGKTTI--------------VHHLLEQSPIPLTKAISATTRPPRKGEIDGED 64

Query: 67  EAIVF---AAARLDHVENVIRPA--LMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDS 119
              +      ARL H +  +  A     G           +     +  R  +   FL+ 
Sbjct: 65  YYFLSHEEFMARL-HQQEFVETAEVYGAGYW-------YGTLVSEIERARALNSWSFLEI 116

Query: 120 LQEISVQ--EVMPD-CTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             E +++  ++ PD  TI L  P  +I  +R++ R +  E             I ++ +Q
Sbjct: 117 DVEGALRVVQLYPDAITIFLKTPSPEIIEQRLRGRGTDSEE-----------TIQKRLKQ 165

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
             L++A+    R  I++      +    I+ ++ 
Sbjct: 166 AHLELAQADQYRYQIIN--DHLDAAVQRIIALLQ 197


>gi|168184383|ref|ZP_02619047.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
 gi|182672560|gb|EDT84521.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf]
          Length = 196

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 64/214 (29%), Gaps = 52/214 (24%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEFG------- 63
           G+GK+T    +   L+++ Y+      TR+P      E   H+ L    D          
Sbjct: 17  GSGKST----IAELLEKEGYNYIESYTTRKPRYK--GERG-HIFLDSINDRNDIDILNNG 69

Query: 64  --AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +   I +   + +H          +G+         S Y  + +  +   L +D  +
Sbjct: 70  YYPKENVIAYTCYKDEHYYATKEQYKNKGR---------SIYIVEVKGVNELRLEIDDAE 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                       + L     I   R+  RY    +   +Y   +             +  
Sbjct: 121 I---------LVLYLKADKQIRKDRMIKRYIENGNVSNNYLIAEQKA---------QERI 162

Query: 182 RNQPDRC------HIVDSAHSFQSVATNILNIVW 209
            +  +        +++D+      V  +I  I+ 
Sbjct: 163 IHDKENFQIIPCDYVIDANMPISEVLKSIKTIIE 196


>gi|332157901|ref|YP_004423180.1| signal recognition particle protein [Pyrococcus sp. NA2]
 gi|331033364|gb|AEC51176.1| signal recognition particle protein [Pyrococcus sp. NA2]
          Length = 322

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GKTT I+ L  +L++  + V +      T  A A   +         G + 
Sbjct: 126 ILFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQI--EEHAKRIGVKV 181

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R  +    +D +++I+ 
Sbjct: 182 IKHKYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKIA- 231

Query: 126 QEVMPDCTII 135
           +   P+  I 
Sbjct: 232 RVTKPNLVIF 241


>gi|322503141|emb|CBZ38225.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 272

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 29/177 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +  EG++G GKT     L   L         T  P         R      G +E  A A
Sbjct: 68  VVVEGLDGTGKTLVTRTLAEKLSG---VAISTPPPQFAEIRSTFR------GQEEAVARA 118

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123
               ++AA      +++  +     +++ DR+  S+ A                D++   
Sbjct: 119 ---FYSAANYIAAASILAASQS--SVVVVDRWWCSTCAMALANGCCYDSLPPSGDAVYRW 173

Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVM 168
                 PD   +L +              +   +R  +  S      ++ + R +++
Sbjct: 174 PEDLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSQSEMRRVAMEAYRRTNML 230


>gi|323341595|ref|ZP_08081828.1| deoxynucleoside kinase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464020|gb|EFY09213.1| deoxynucleoside kinase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 219

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 39/206 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG+ G GK++ + +L +    + Y+     EP          + +L     +    +
Sbjct: 21  IVIEGVVGVGKSSLMRILGQ----EGYE--EFEEP-------VVDNPVLDKFYHDRCRYS 67

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQG-----ERDSSQHLFL 117
             +   F   R +H++     +       + DR  + D+ +A          D    ++ 
Sbjct: 68  FPLQVFFLNKRFEHIKQAKDVSKA-----VMDRSIYGDAIFARMLNLSGEMSDEEFQIYS 122

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE------------SACLDYFERK 165
           + LQ +     +P   + L++ VD  + R++ R    E                +YF+  
Sbjct: 123 ELLQNMLEHVHVPKLMVYLEISVDEAMNRIKKRGRDYELIVEREYWEKLNYEYSNYFDNY 182

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIV 191
           D+    K     LD   N+ DR +++
Sbjct: 183 DLSPMLKINVDHLDFENNEADRIYVL 208


>gi|146074845|ref|XP_001462622.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134066700|emb|CAM65160.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 272

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 29/177 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +  EG++G GKT     L   L         T  P         R      G +E  A A
Sbjct: 68  VVVEGLDGTGKTLVTRTLAEKLSG---VAISTPPPQFAEIRSTFR------GQEEAVARA 118

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123
               ++AA      +++  +     +++ DR+  S+ A                D++   
Sbjct: 119 ---FYSAANYIAAASILAASQS--SVVVVDRWWCSTCAMALANGCCYDSLPPSGDAVYRW 173

Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVM 168
                 PD   +L +              +   +R  + +S      ++ + R +++
Sbjct: 174 PEDLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSHSEMRRVAMEAYRRTNML 230


>gi|4033719|gb|AAC97156.1| unknown [Streptococcus pyogenes]
          Length = 213

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV                  +L         
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTDVFYEAVDNNP---------VLDFYYQ--DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 47  KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211
           +    +     +    P     +D              +V   I   + EL
Sbjct: 162 QVHGEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210


>gi|91076054|ref|XP_966357.1| PREDICTED: similar to cytidylate kinase [Tribolium castaneum]
          Length = 212

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 66/226 (29%), Gaps = 49/226 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  GAGK T    +        Y VH+        A +  R         
Sbjct: 15  MAKPKVIFVLGAPGAGKGTQCQKIVDNF---GY-VHL-------SAGDLLREERAKPDSK 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117
                                +I   + EGKI+   +      S      ++   +   +
Sbjct: 64  ------------------YGELIETYIREGKIVPVEI----TCSLLENAMKKSGKEKFLI 101

Query: 118 DSL--QEISVQE---VMPD-----CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           D     + ++      + D       +  D P ++ + R   R +       D  +  + 
Sbjct: 102 DGFPRNQNNLDGWNKTLADNVKLLFVLFFDCPKEVCVDRCLGRGAAGSGRSDDNMQSLEK 161

Query: 168 MIHEKRRQIFLDIARNQPDRCHI--VDSAHSFQSVATNILNIVWEL 211
             +   ++    I +   +R  +  +D+  + + V   +  +  E+
Sbjct: 162 RFNTFTQET-QPIVKYYEERGLVRNIDATKAPEDVFGRVKEVFTEV 206


>gi|255325066|ref|ZP_05366172.1| shikimate kinase [Corynebacterium tuberculostearicum SK141]
 gi|255297631|gb|EET76942.1| shikimate kinase [Corynebacterium tuberculostearicum SK141]
          Length = 178

 Score = 48.1 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 43/206 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  GAGK+T    L   L  +  D  H+  +    P  E    +      D     
Sbjct: 15  VVLVGPPGAGKSTIGRRLSHALSCELVDSDHLIEQAKDKPCGEVFSEL---GEPD----- 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                F A   +HV      AL  G ++       S     G          + L+  + 
Sbjct: 67  -----FRALEAEHVA----AALRTGGVV-------SL----GGGAVLTDATRELLERHT- 105

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                   I LD+  + G +R     +    A  D  E    ++ E RR  + ++A    
Sbjct: 106 -------VIFLDISPEEGARRTSGDSNRPVLAAADPLEHYRNLV-EARRPYYQEVADY-- 155

Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211
            R    D+  + Q V  +IL  +  L
Sbjct: 156 -RVRT-DA-RTPQQVVGDILGFLDTL 178


>gi|294636245|ref|ZP_06714656.1| hemin import ATP-binding protein HmuV [Edwardsiella tarda ATCC
           23685]
 gi|291090460|gb|EFE23021.1| hemin import ATP-binding protein HmuV [Edwardsiella tarda ATCC
           23685]
          Length = 261

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 30/213 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDE 61
           G  ++  G  GAGK+T + LL  +L         + R+    PA + A R  ++      
Sbjct: 32  GELVAIIGPNGAGKSTLMRLLAGYLHPDAGRCTLLGRDLADWPAQQLARRRAVMRQHSAL 91

Query: 62  FGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               +   V A  R       H + + R     G + L DR   +        +  +   
Sbjct: 92  AFPFSVREVIAMGRAPCPTGHHPQALQRVMQQSGCLPLADRDYRTL----SGGEQQRVQL 147

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEK 172
             +L ++   +  P   + LD      L     +  LR    +    R+ +     +H+ 
Sbjct: 148 ARALAQLWQPDPQP-RWLFLD-EPTSALDLYHQQQLLRLLHGMTR--REPLAVCCILHD- 202

Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSV 200
                L++A    DR  ++      +    + V
Sbjct: 203 -----LNLAALYADRILLLHHGELVANGPPEQV 230


>gi|311745708|ref|ZP_07719493.1| adenylate kinase [Algoriphagus sp. PR1]
 gi|126575151|gb|EAZ79501.1| adenylate kinase [Algoriphagus sp. PR1]
          Length = 194

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 39/219 (17%)

Query: 1   MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M SG++ I   G  GAGK T    L   +Q+       T +       E     LL+   
Sbjct: 1   MKSGMYNIVLFGPPGAGKGTQSEKL---IQKYGLTHLSTGDLFRKHLGEGTELGLLAKKY 57

Query: 60  DEFG---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              G    +   I         VE  I         +  D F  ++        +     
Sbjct: 58  MNEGHLVPDEVVIKM-------VEEKISETKDSKGFIF-DGFPRTT------AQAEALDK 103

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-- 174
           + S  ++ +  +     I LD+P D+  +R++ R   + S   D  + + +    +    
Sbjct: 104 MLSHHDLVISGM-----IALDVPQDVLRERIKERG--KTSNRADDQDDEKINTRIQVYMN 156

Query: 175 -----QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  + +    Q  +   ++       +   I +++
Sbjct: 157 ETLPVAGYYE----QQGKFQKINGVGEIDEIFNQITSVI 191


>gi|79329010|ref|NP_001031966.1| adenylate kinase family protein [Arabidopsis thaliana]
 gi|332006554|gb|AED93937.1| adenylate kinase family protein [Arabidopsis thaliana]
          Length = 580

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 69/232 (29%), Gaps = 49/232 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   L+       +    D+       GT   + A+  +          +
Sbjct: 84  ISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFM---NSGSLVPD 140

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              I   A RL       R    E    L D F          R  +Q   LD L     
Sbjct: 141 EIVIAMVAGRL------SREDAKEHGW-LLDGF---------PRSFAQAQSLDKLN---- 180

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171
             V PD  I+LD+P +I + R   R     +  +                   +     E
Sbjct: 181 --VKPDIFILLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEE 238

Query: 172 KRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           K +   QI+      I     D    +D+    + V      ++ ++  KR+
Sbjct: 239 KVKARLQIYKQNSEAIISAYSDVMVKIDANRPKEVVFEETQTLLSQIQLKRM 290


>gi|258540441|ref|YP_003174940.1| hypothetical protein LC705_02250 [Lactobacillus rhamnosus Lc 705]
 gi|257152117|emb|CAR91089.1| Putative protein without homology [Lactobacillus rhamnosus Lc
          705]
          Length = 39

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 20/27 (74%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +G FI+FEG +GAGKT+ ++ L   L+
Sbjct: 2  TGTFITFEGPDGAGKTSVLNTLIPKLK 28


>gi|12045124|ref|NP_072935.1| hypothetical protein MG_268 [Mycoplasma genitalium G37]
 gi|255660363|ref|ZP_05405772.1| hypothetical protein MgenG_02619 [Mycoplasma genitalium G37]
 gi|1723139|sp|P47510|Y268_MYCGE RecName: Full=Uncharacterized protein MG268
 gi|3844864|gb|AAC71490.1| conserved hypothetical protein [Mycoplasma genitalium G37]
 gi|166078655|gb|ABY79273.1| conserved hypothetical protein [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 228

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 34/211 (16%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA----IVF 71
           GKTT  + L   +Q     V    E       +    +LL+   +       +    + F
Sbjct: 26  GKTTIANTLANHIQAA--KVVCELE-----TNDQLVELLLAKMYERSDELLYSPLFQLYF 78

Query: 72  AAAR---LDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL-QEISV 125
              R     +  N I P        + DR  F D  +A       +   + + L   ++ 
Sbjct: 79  TLNRFGKYQNNCNTINPT-------IFDRSIFEDWLFAKHNIIRPAVFSYYNQLWNRLAK 131

Query: 126 QEV----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH--EKRRQIFLD 179
           + V    +P+  +ILD    +  KR+  R    E   +D F +  +      +    F++
Sbjct: 132 ELVNKHGVPNLYVILDGDWKLFEKRLFMRNRKVE---IDNFTKNQLYFQNLHRVYTGFME 188

Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +  +      I+D+     ++   IL  + 
Sbjct: 189 AVCNDFGINYCIIDAKLPIVTIIKMILEKLK 219


>gi|228472360|ref|ZP_04057125.1| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine
           pyrophosphokinase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276228|gb|EEK14963.1| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine
           pyrophosphokinase [Capnocytophaga gingivalis ATCC 33624]
          Length = 369

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 20/174 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  + L      +     +  E    P  E             +   
Sbjct: 177 YITVEGNIGAGKTSLATRLAEDFSGQ----LLLEEFASNPFLEDFYK-----DSQRYALA 227

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERDSSQHLFL--DSLQE 122
            E   F   R   ++  +  +  +  + + D +  S S  +  E    +   L  +    
Sbjct: 228 TELS-FLKDRYKQLQQTL--SQNKHTLWVAD-YAFSKSLIFAMETLPLKEYNLYEELFYL 283

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEK 172
           +  + + PD  I L    D  LK +Q R    E     A L+  E+  +   ++
Sbjct: 284 LFERMIKPDLYIYLHQNTDSLLKNIQKRGRSFETPISKAYLERIEQSYLSFLQR 337


>gi|291613417|ref|YP_003523574.1| deoxynucleoside kinase [Sideroxydans lithotrophicus ES-1]
 gi|291583529|gb|ADE11187.1| deoxynucleoside kinase [Sideroxydans lithotrophicus ES-1]
          Length = 213

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 21/211 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++   +I  EG  G GKT+    L   ++ +     +  +P   P               
Sbjct: 3   LSKYRYIVVEGPIGVGKTSLAQRLAEHVEVQ----PLLEKPQDNPF---LASFYQDPVRY 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117
               +   + F   R++   ++ +  L + +  + D +L   D+ +A     D    L+ 
Sbjct: 56  ALPTQ---LFFLFQRINEARDMAQMDLFQTRT-ISD-YLFEKDALFARLTLSDDEYKLYQ 110

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKR 173
              Q +S Q   PD  I L  P     +RV+ R +  E +  D               + 
Sbjct: 111 TIYQGLSPQVPTPDLVIYLQAPTYALAERVRRRGNRYERSIQDDYLARLADSYGEFFHQY 170

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
            +  L +  ++      VD++  F+ +   I
Sbjct: 171 DEAPLLVVNSEHLNF--VDNSDDFELLLDRI 199


>gi|163914947|ref|NP_001106465.1| adenylate kinase 5 [Xenopus (Silurana) tropicalis]
 gi|158254016|gb|AAI54084.1| LOC100127649 protein [Xenopus (Silurana) tropicalis]
          Length = 477

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 61/223 (27%), Gaps = 46/223 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVL 54
           +     I   G  G+GK T    L     R         E         T  ++  + ++
Sbjct: 288 LKKAKVIFVLGGPGSGKGTQCEKLAH---RYGLSPLAVSELLQSDLATFTERSKLIKDIM 344

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                       E           V+  +   L   K           + + G    ++ 
Sbjct: 345 EHGDQVPMDIILEI----------VKETMSSCLGNSK----------GFLFDGFPRETKQ 384

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                 +E   +   P+  + LD   +    R+Q R        ++           +R 
Sbjct: 385 A-----EEFECKISKPNIVLYLDCSAETMTSRLQKRSKASHRNDIN------TETIRRRL 433

Query: 175 QIFLDIAR---NQPDR---CHIVDSAHSFQSVATNILNIVWEL 211
           + +           DR    + +++  S + V  +I + V  +
Sbjct: 434 EAYYQAINPIITYYDRKSLLYKINAEKSPEDVFLHICSAVDSV 476


>gi|320450935|ref|YP_004203031.1| putative deoxynucleoside kinase subfamily [Thermus scotoductus
           SA-01]
 gi|320151104|gb|ADW22482.1| putative deoxynucleoside kinase subfamily [Thermus scotoductus
           SA-01]
          Length = 202

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 30/170 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63
           ++++  G  G+GK++  +LL                 G  P  EA      L     + G
Sbjct: 1   MYLAIAGNIGSGKSSLTALLSEAF-------------GLKPVYEAVSENPYLEDFYRDMG 47

Query: 64  AEAEA--IVFAAAR-LDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118
           A A    + F A R   H+  V        + ++ DR  + D+    Q           D
Sbjct: 48  AYAFHSQVFFLARRVRQHLLEV-----NGARAVVQDRTVYEDALVFAQNLYREGHLKERD 102

Query: 119 S-----LQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                 L +     +  PD  I L   +    +R++ R    E    D +
Sbjct: 103 WRTYLDLFQSVSPALRKPDLLIYLRASLPTLRERIKKRGRPFEQNLPDRY 152


>gi|114630605|ref|XP_507800.2| PREDICTED: similar to Deoxycytidine kinase (dCK) [Pan troglodytes]
          Length = 260

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 85/238 (35%), Gaps = 36/238 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREP------GGTPAAEAAR 51
           IS EG   A K+T +++LK+  +          +  +V  T++                +
Sbjct: 24  ISIEGNIAADKSTFVNILKQLCEDWEVVPEPVARRCNVQSTQDEFEELTTSQKNGGNVLQ 83

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAY 105
            +        F  +  A + +  R         +++  +P L   + +  DR++ +S  Y
Sbjct: 84  MMCKKPERWSFTFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLY 142

Query: 106 QGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CL 159
           + E  +     +     D +     Q +  D  I L    +  L R+  R    E    L
Sbjct: 143 ESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQGIPL 202

Query: 160 DYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +Y E+     +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 203 EYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257


>gi|86160101|ref|YP_466886.1| deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776612|gb|ABC83449.1| Deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 215

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 53/173 (30%), Gaps = 41/173 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    +I+ EG  G GKTT   +L   L                     AR VL     +
Sbjct: 1   MERPRYIAVEGPIGVGKTTLAQVLAERL--------------------GARLVLEEAEAN 40

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYA-YQGERDSS-- 112
            F        F A R  H        L+        +   D F  S+ A Y   +D    
Sbjct: 41  PFLPA-----FYADRKKHAFQAQVFFLLSRFQQQQALFQQDLFSSSTVADYLFAKDRIFA 95

Query: 113 -------QHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                  +      + E +  + V PD  I L    D+ L RV+ R    E  
Sbjct: 96  TLTLEPAELALYRQIHELLGPRVVRPDLVIYLQARTDVLLSRVKKRGRDFERG 148


>gi|225010433|ref|ZP_03700904.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Flavobacteria bacterium MS024-3C]
 gi|225005262|gb|EEG43213.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Flavobacteria bacterium MS024-3C]
          Length = 382

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 56/189 (29%), Gaps = 21/189 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKTT  S++      K         P      E             F  E
Sbjct: 181 FIAIEGNIGAGKTTLSSMISEDFNAKLILEGFADNPFLPKFYE-------DQARYAFPLE 233

Query: 66  AEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEI 123
                F A R         +  L +  ++  D  +  S  + Q      +      L   
Sbjct: 234 MS---FLAERYQQFTESTSQLDLFKNFMV-SDYDIYKSLIFAQITLGKEEFALYRKLFGF 289

Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             Q+   PD  I L    +  L+ +  R    E          D    EK  Q +LD  +
Sbjct: 290 MYQDAKVPDAYIYLYQNTERLLENIAKRGRDYEKTI-------DAEYLEKINQGYLDFIK 342

Query: 183 NQPDRCHIV 191
                  ++
Sbjct: 343 THHQNHQLI 351


>gi|328464068|gb|EGF35555.1| deoxyadenosine kinase [Lactobacillus helveticus MTCC 5463]
          Length = 215

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L   L  + +   V   P            +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     L+H    I  A+ +   +  DR  + D+ +    A     D ++    D L
Sbjct: 53  --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKIADPTEFKIYDDL 109

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            E  +++        PD  I + + +D  L R++ R    E    D
Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 155


>gi|260890002|ref|ZP_05901265.1| dTMP kinase [Leptotrichia hofstadii F0254]
 gi|260860608|gb|EEX75108.1| dTMP kinase [Leptotrichia hofstadii F0254]
          Length = 64

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 21/48 (43%)

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
            +   A A +++++  R    +         G I++ DR+  S+  +Q
Sbjct: 11  AESVNAYAASVLYSVDRFASFKTDWEEFYNNGGIVISDRYTISNMIHQ 58


>gi|94989614|ref|YP_597714.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus
           pyogenes MGAS10270]
 gi|94543122|gb|ABF33170.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus
           pyogenes MGAS10270]
          Length = 229

 Score = 48.1 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 39/232 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV         P  +                
Sbjct: 17  MLIVLAGTIGAGKSSLAAALGNHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 63  KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 121

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 122 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 177

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
           +    +     +    P     +D   S   V   + L  V ++V  ++  L
Sbjct: 178 QVHGEYPTWYEDYKVSPK--MKIDGN-SLDFVQNPDDLATVLQMVDDKLKEL 226


>gi|327279438|ref|XP_003224463.1| PREDICTED: UMP-CMP kinase-like [Anolis carolinensis]
          Length = 196

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A +  R      G            
Sbjct: 10  GGPGAGKGTQCARVVEK-----------YGYTHLSAGDLLRDERKRPGS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + +GKI+       L  R +D + A   Q  +          D+
Sbjct: 48  -------QYGELIENYIKDGKIVPVEITISLLKRAMDETMAANAQKNKFLIDGFPRNEDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I + R   R         +    + +   EKR   
Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCENEICINRCLERGKSSGRTDDNR---ESL---EKRIHT 154

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           +L+  +       +  +   VD++ S   V   ++ I
Sbjct: 155 YLESTKPIIDLYEKMGKVRKVDASKSVDEVFEKVVTI 191


>gi|294660489|ref|NP_853272.2| deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)]
 gi|284812151|gb|AAP56840.2| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)]
 gi|284930758|gb|ADC30697.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(high)]
 gi|284931337|gb|ADC31275.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. F]
          Length = 215

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 67/230 (29%), Gaps = 46/230 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEF 62
           + I   G+   GK+     +    +         RE         +    +       E 
Sbjct: 1   MLIGISGMVACGKSVLSKRIHEHYK----TSLFLREFKEDDVVFNKFLEWLYEKRPNTEI 56

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGK-----ILLCDRFL---------------DSS 102
             +A            +  + +    E K      ++ DRF                D  
Sbjct: 57  SFQAYIC---ENHSTKMNEIWKNYRSENKDSKKDHIIIDRFCIEHNIFARLILAKKGDKF 113

Query: 103 Y-AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
             AYQ   D    + +D   EI      PD  I LD+  +   KR+  R    E    D 
Sbjct: 114 LNAYQAMFD----MMIDK-NEI------PDIAIFLDVNFENFKKRLFKRNRKVEVNNFD- 161

Query: 162 FERKDV--MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ-SVATNILNIV 208
            E  D    +H+  R+ F  +        + +D+    +  V    + I+
Sbjct: 162 -ENLDYWKELHQNYRKNFEILCEKYKVNAYYIDTNDMTEIEVFNKAVEII 210


>gi|158316732|ref|YP_001509240.1| uridine kinase [Frankia sp. EAN1pec]
 gi|158112137|gb|ABW14334.1| Uridine kinase-like protein [Frankia sp. EAN1pec]
          Length = 268

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 54/188 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-----------VTREPGGTPAAE------- 48
           ++ +G + AGKTT    L   L  +   V            + R    +P          
Sbjct: 33  VAIDGPDAAGKTTLADDLAGTLADRGRPVIRASVDGFHQPRLIRRGSLSPDGYFFDAFDY 92

Query: 49  -AARHVLLSCGVDEFGAEAEAIVFAAARLDHVEN--VIRPALME--GKILLCDRFLDSSY 103
            A RH+LL     +         + AA  DH+ +  +  P        +L+ D       
Sbjct: 93  TALRHLLLDPLSPDGDRR-----YRAAAFDHLRDAPLDSPTHEAVSDAVLIVD------- 140

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--- 160
                      L  D L++        D ++ L +     L+R   R  +      D   
Sbjct: 141 --------GVFLLRDELRDYW------DLSVFLQISPAESLRRAM-RRDVALFGSPDVVR 185

Query: 161 -YFERKDV 167
             +E + +
Sbjct: 186 ERYEARYL 193


>gi|118394990|ref|XP_001029852.1| hypothetical protein TTHERM_01276410 [Tetrahymena thermophila]
 gi|89284125|gb|EAR82189.1| hypothetical protein TTHERM_01276410 [Tetrahymena thermophila
           SB210]
          Length = 488

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 21/203 (10%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA---IVFA 72
           GKT+ +  ++  ++   Y V V  E   T A       +L           +    ++  
Sbjct: 107 GKTSGLVYVQEKMKELGYLVFVVPEAATTIANGGG---MLDMQNYNMVQAIQFQTNLLKL 163

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
             RL++    I     +  I+LCDR L    AY   ++ ++ L +++L E+ +++   D 
Sbjct: 164 QIRLENTMTQIAKLSRKKAIVLCDRGLMDGQAYVEPKEWAELLNINNLNEVLMRDDRYDL 223

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDIARNQPDRCHI 190
            I L +   +G ++  N+ +         FE   +  ++ +K +  +L      P+   I
Sbjct: 224 VIHL-VTAALGAEKFYNQQNSA------RFETAEEAAIMDKKTQDAWL----GHPNH-VI 271

Query: 191 VDSA-HSFQSVATNILNIVWELV 212
           VD+   SF+   T +LN V + V
Sbjct: 272 VDNNVKSFEEKLTKMLNAVKQCV 294


>gi|228998402|ref|ZP_04157993.1| hypothetical protein bmyco0003_29640 [Bacillus mycoides Rock3-17]
 gi|228761323|gb|EEM10278.1| hypothetical protein bmyco0003_29640 [Bacillus mycoides Rock3-17]
          Length = 192

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 37/189 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      R L++  + +     P G    E  +++ L     E     
Sbjct: 5   ISLQGPMASGKTTL----ARRLEKHGFPILY-ENPYG--IVEKRKNLNLDIYTKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDS---SYAYQGERDSSQHLFLDSLQE 122
               F   +   +E  I+      G+I++ DR  +       Y  +         + L++
Sbjct: 54  ----FITNQRMFIEAKIKEIQNARGRIVIFDRGSEDIEFYTIYFPKLIGMDWDIENELKD 109

Query: 123 --ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               ++    D    LD+   I  +R +N  + R S     FE++            L++
Sbjct: 110 ELYKLRRCRSDAIFYLDVSKKILQERKKNDNTRRRST----FEKQ------------LEL 153

Query: 181 ARNQPDRCH 189
           A  +     
Sbjct: 154 AEIEKQWYK 162


>gi|311739526|ref|ZP_07713361.1| shikimate kinase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305342|gb|EFQ81410.1| shikimate kinase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 178

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 43/206 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  GAGK+T    L   L  +  D  H+  +    P  E    +      D     
Sbjct: 15  VVLVGPPGAGKSTIGRRLSHALSCELVDSDHLIEQAKDKPCGEVFSEL---GEPD----- 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                F A   +HV      AL  G ++       S     G          + L+  + 
Sbjct: 67  -----FRALEAEHVA----AALRTGGVV-------SL----GGGAVLTDSTRELLERHT- 105

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                   I LD+  + G +R     +    A  D  E    ++ E RR  + ++A    
Sbjct: 106 -------VIFLDISPEEGARRTSGDSNRPVLAAADPLEHYRNLV-EARRPYYQEVADY-- 155

Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211
            R    D+  + Q V  +IL  +  L
Sbjct: 156 -RVRT-DA-RTPQQVVGDILGFLDTL 178


>gi|255561492|ref|XP_002521756.1| uridylate kinase plant, putative [Ricinus communis]
 gi|223538969|gb|EEF40566.1| uridylate kinase plant, putative [Ricinus communis]
          Length = 301

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 57/214 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69
           G  G GK+T  + L + +    Y            + +  R  + L              
Sbjct: 101 GGPGGGKSTQCANLAKQI---GY--------THLSSGDLLRKAMKLDAENGTM------- 142

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-----------QHLFLD 118
                        I   + EGK +  D    +    Q   D S           +   + 
Sbjct: 143 -------------IESIIKEGKSVPSD---VTMRILQKAIDESGNDKFLLDGFPRDEEIR 186

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RR 174
           S  E +   + P+  +  D   +   KR+ +R   R     D   RK     E+      
Sbjct: 187 SAFETATN-IEPELVLFFDCSAEEREKRILSRNEGRVDDNPDSL-RKRFKYFEEHTLPVV 244

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +             VD+A   + V   + +I+
Sbjct: 245 DYYRS-----KGIVSEVDAAKPTEEVFEKLKSIL 273


>gi|296161790|ref|ZP_06844592.1| deoxynucleoside kinase [Burkholderia sp. Ch1-1]
 gi|295887954|gb|EFG67770.1| deoxynucleoside kinase [Burkholderia sp. Ch1-1]
          Length = 226

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G GKT+    L +    +     +   P   P  E             +   
Sbjct: 19  YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLERFYR-----DTARYALP 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
            +   FA  R    ++V   A + G  L+ D F+   +  +A    ++    L+      
Sbjct: 70  TQLH-FALQRAQQAQDV-SAAHLSGTPLIAD-FMTQKNDIFARLTLQEDEWQLYRALAAR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166


>gi|289192995|ref|YP_003458936.1| cytidylate kinase [Methanocaldococcus sp. FS406-22]
 gi|288939445|gb|ADC70200.1| cytidylate kinase [Methanocaldococcus sp. FS406-22]
          Length = 181

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +    + PD TI    P+++  +R+  R S+ +   L     ++    ++ ++I+   
Sbjct: 85  WMLLKNGIKPDLTIWFKAPLEVRAERISKRESISKEIALKKMVEREASEKKRYKEIYNID 144

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRV 216
             +      ++D++    + V   + + +  L QK++
Sbjct: 145 LDDLSIYDLVIDTSKWDVEGVFNIVSSAIDNLTQKQI 181


>gi|160880353|ref|YP_001559321.1| hypothetical protein Cphy_2216 [Clostridium phytofermentans ISDg]
 gi|160429019|gb|ABX42582.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]
          Length = 283

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN  LFI  EGI G+GKTT   +L   L   N++VH+  E
Sbjct: 1  MNK-LFI-IEGIPGSGKTTFARMLGDKLTELNHEVHLYVE 38


>gi|300718286|ref|YP_003743089.1| putative lipoprotein [Erwinia billingiae Eb661]
 gi|299064122|emb|CAX61242.1| putative lipoprotein [Erwinia billingiae Eb661]
          Length = 252

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 50/171 (29%), Gaps = 32/171 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----------RHVLL 55
           I+  G +G+GK+T  + L +    +     +          +             R++L 
Sbjct: 17  IAITGCDGSGKSTLAASLVKHFSSQQPTEFLYLGQSSGLIGKWIADLPIIGAPFGRYLLK 76

Query: 56  SCGVDEFGAEA--------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---- 103
                                 + +  R      ++R     G++L+ DR+  +      
Sbjct: 77  KSDRVHQRPATPPGNVTALVIFLLSFWRAYKFRKMLRKN-RPGQLLIADRYPQAEVPGFR 135

Query: 104 --AYQGERDSSQHLFLDSLQEISVQEVM-----PDCTII-LDLPVDIGLKR 146
               Q  +    + ++  L+    +        P   +I LD+       R
Sbjct: 136 FDGPQLAKTHGGNRWIGWLRNKEQKLYQWMASYPPLLLIRLDIDAQTAHAR 186


>gi|284161352|ref|YP_003399975.1| signal recognition particle-docking protein FtsY [Archaeoglobus
           profundus DSM 5631]
 gi|284011349|gb|ADB57302.1| signal recognition particle-docking protein FtsY [Archaeoglobus
           profundus DSM 5631]
          Length = 367

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ + + L    Y V +    G T  A A     L       G + 
Sbjct: 173 IVFVGVNGTGKTTTIAKVAKRLIDFGYSVVLAA--GDTFRAGAIEQ--LEEHGKRLGVKV 228

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + ++ A  +G  I+L D            R  ++   +D L +I  
Sbjct: 229 IKHKQGADPCAVIYDALKHAESKGIDIVLAD---------TAGRMHTKKNLIDQLAKI-K 278

Query: 126 QEVMPDCTIILD 137
           +   PD  I +D
Sbjct: 279 RVTKPDLVIFVD 290


>gi|71746904|ref|XP_822507.1| adenylate kinase [Trypanosoma brucei TREU927]
 gi|70832175|gb|EAN77679.1| adenylate kinase, putative [Trypanosoma brucei]
 gi|261332238|emb|CBH15232.1| adenylate kinase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 229

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 69/243 (28%), Gaps = 57/243 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  G+GKT+  ++LK             V    E   T   +  R  +           A
Sbjct: 7   GPPGSGKTSVSTVLKERYGFCYVTPIEAVSHAVEYSDTDVGDKLRRYVDEGEPIPDDLLA 66

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            A    A                       R  D +    G   +      +  + +  +
Sbjct: 67  RA---VAD--------------------ATRGPDCT---NGFLLNDFPKTAEQARHLKAE 100

Query: 127 EVMPDCTIILDLPVDIGLKR----------------------VQNRYSLRESACLDYFER 164
            + PD  ++L +P  + + R                      V+ R  +     +   E 
Sbjct: 101 GIEPDAIVVLSVPDSLLVDRHAGRWVHPSSGRVYHTFYNPPNVKGRDDVTGQPLVQRPED 160

Query: 165 KDVMIHEKRRQIF-----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
            +  +H+   + +     L      P   H VD   S  SV  +I  ++  ++  +    
Sbjct: 161 TEEAVHQGLVKYYESIRGLRAVYGDPRLWHTVDGFASLDSVHVSICRVLDPIIADKTRRW 220

Query: 220 SSK 222
            SK
Sbjct: 221 WSK 223


>gi|327274228|ref|XP_003221880.1| PREDICTED: deoxycytidine kinase-like [Anolis carolinensis]
          Length = 256

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 45/244 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           I+ EG   AGK+T ++LLK+  +   +DV    V R        +    +         L
Sbjct: 17  IAIEGNIAAGKSTFVNLLKQAGEE--WDVVPEPVARWCNVQNCQDECEELSDSQKCGGNL 74

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH--VENVIRPALMEGKILL------CDRFLDSS 102
           L    ++    +      A     R     +E  I+ A  E  ++        DR++ +S
Sbjct: 75  LQMMYEKPERWSFTFQSYACLSRIRAQLKSLEGKIKEA--ENPVVFFERSVYSDRYIFAS 132

Query: 103 YAYQGERDSSQHLFL--DSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
             Y+ +  +     +  D    ++ Q    +  D  I L    +  L R+  R    E  
Sbjct: 133 NLYESDCMNETEWTIYQDWHNWMNQQFGSCLELDGIIYLRATPEKCLNRIYVRGRDEEQG 192

Query: 158 -CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF---QSVATNILNIV 208
             ++Y E+     +  + H   R  F  + +  P     +D    F   +    N++  V
Sbjct: 193 IPIEYLEKLHYKHESWLQHRTLRMDFEYL-QELP--ILTLDVNEDFKGNKDRHENMIEKV 249

Query: 209 WELV 212
            E +
Sbjct: 250 KEFL 253


>gi|326532168|dbj|BAK01460.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 243

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 46/217 (21%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCG 58
           FI+F  G  G+GK T  S +        +       + R     GT   E    ++    
Sbjct: 60  FIAFVLGGPGSGKGTQCSRIASDF---GFSHVSAGDLLRNEISSGTDQGEWILEIIREGR 116

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +            +   ++ V   I  +    K +L D F          R     +  +
Sbjct: 117 IVP----------SEITVELVRKAIESSTA--KRVLIDGF---------PRCEENRIAFE 155

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RR 174
            +         PD  +  D P D  +KR+ +R   R    ++   +K + + E       
Sbjct: 156 KIT-----GTEPDLVLFFDCPEDEMVKRLLSRNQGRVDDNIETI-KKRLKVFESLNLPVV 209

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + +    +      H +++  +   +   +  +   L
Sbjct: 210 EYYSSRGKA-----HKINATGTEDEIFEAVRKLFSSL 241


>gi|302336599|ref|YP_003801805.1| deoxynucleoside kinase [Spirochaeta smaragdinae DSM 11293]
 gi|301633784|gb|ADK79211.1| deoxynucleoside kinase [Spirochaeta smaragdinae DSM 11293]
          Length = 214

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 46/164 (28%), Gaps = 22/164 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++   G  GAGK+T +  L   L  + Y   VT  P         R             
Sbjct: 3   KYVVLAGNIGAGKSTLVRKLADRLGFRPYYEPVTENPYLKDFYSDMRRWAFHSQT----- 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117
                +    R  H+         +   ++ DR +      +A     Q           
Sbjct: 58  ---FFLTHRVRTHHL------LAEDPFSVVQDRSMYEDAEVFARNLYEQQSMTKRDWETY 108

Query: 118 DSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             L   +      PD  + L   V    KR+  R    E++  D
Sbjct: 109 QELYHTLITMLPPPDLIVYLRASVTTLKKRIALRGRNFEASISD 152


>gi|299141928|ref|ZP_07035063.1| hypothetical protein HMPREF0665_01511 [Prevotella oris C735]
 gi|298576779|gb|EFI48650.1| hypothetical protein HMPREF0665_01511 [Prevotella oris C735]
          Length = 367

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I   G   AGKTT +  +        Y V    E     +     ++  +  + 
Sbjct: 7   MKTVKKIVLTGGPCAGKTTALVKVIEHFSSLGYKVFTIPEVPTMFSQSGMDYLTTNKKLF 66

Query: 61  EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A  E  +    +   +         E  +++CDR      AY 
Sbjct: 67  YEGEKATLEVQLALEDKFQRMAE----QCEEPAVIICDRGAMDISAYM 110


>gi|227548121|ref|ZP_03978170.1| dephospho-CoA kinase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079783|gb|EEI17746.1| dephospho-CoA kinase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 199

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 36/212 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR-------EPGGTPAAEAAR----HVLLSCGV 59
           GI G+GK+T   L    L+   Y V           EPG    AE A      ++   G 
Sbjct: 9   GI-GSGKSTVAKL----LREAGYPVVDADQVARDNMEPGSPVLAEVAEAFGADIVRDDGS 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A        R   +  +  PA+        +R   +    QG   +   + L  
Sbjct: 64  LDRAELARRAFSDEERTRTLNAITHPAIRAE----SNR-RFAELETQGAAAAVYDMPL-- 116

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L E+ + E M D TI++D+  D  ++R+ +   L E    +   R+      +       
Sbjct: 117 LVELGLDEEM-DLTIVVDVHPDERVRRLVSSRGLDEQDARNRISRQISDAERR------- 168

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            A+       ++D+  S + +   +  +V  +
Sbjct: 169 -AKAD----VVIDNNGSLEELKQQVNEVVSRI 195


>gi|291319955|ref|YP_003515213.1| deoxyguanosine kinase [Mycoplasma agalactiae]
 gi|290752284|emb|CBH40255.1| Deoxyguanosine kinase [Mycoplasma agalactiae]
          Length = 217

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 78/229 (34%), Gaps = 31/229 (13%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + I   GI G   +GK+T +  L  +       + +       P              + 
Sbjct: 1   MII---GISGMISSGKSTLVKKLSDYYPN---SIFIEEFSDDDPVFNTFLKWCYEKQPNT 54

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQH--- 114
             A    ++ +    D         L    I+      DRF+   Y +     S ++   
Sbjct: 55  DIAFQSFLIESL--TDSFYKHKEEFLKNHNIIEDHIFLDRFILEHYIFAKATLSKKNKKY 112

Query: 115 -LFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD-----V 167
               D L   I   +  PD  + +D+  +   +R+  R    E    +++E ++     +
Sbjct: 113 FEAFDKLFAHIYDSKCNPDFALFIDINWETFKQRIFQRGRKVEID--NFYENEEYFKHLL 170

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQKR 215
            I+++    F+D+A        I+DS   S  +V +     +   ++ +
Sbjct: 171 SIYKRT---FVDLASKYNIPYVIIDSNNKSNSNVLSEATVAIANYLKNK 216


>gi|229552016|ref|ZP_04440741.1| possible deoxyguanosine kinase [Lactobacillus rhamnosus LMS2-1]
 gi|258539431|ref|YP_003173930.1| deoxynucleoside kinase [Lactobacillus rhamnosus Lc 705]
 gi|229314593|gb|EEN80566.1| possible deoxyguanosine kinase [Lactobacillus rhamnosus LMS2-1]
 gi|257151107|emb|CAR90079.1| Deoxynucleoside kinase [Lactobacillus rhamnosus Lc 705]
          Length = 242

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 36/230 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA-IVFA 72
           GAGKT+   +L   ++      +     G    A   +    +         A   I F 
Sbjct: 9   GAGKTSLTKVLSADMEA---PAYYEDVEGNGMIANMLQKFYGAGADSRKRTGAMLQIAFL 65

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLDSLQEISVQ 126
             R   ++  +          + D  L+S +         GE D   +    +L +    
Sbjct: 66  TFRYQQLKKAVTQENA-----IMDSSLESDFVMASQLHKHGEIDDIDYNVYVTLSQEMQS 120

Query: 127 EV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            V       +PD  + L +  D  L  +Q+R    E       + + V  +++    + D
Sbjct: 121 NVNGSPWNGLPDLAVYLKIDPDHELDEIQSRGRDMEDI---RQKPELVAYYQRVNAAYQD 177

Query: 180 IARNQ-PDRCHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220
            A+         +D        SA    +V   I + + +L   ++SP +
Sbjct: 178 WAKGYTRSSMITIDRDRYDFMHSAADRATVLDQIESKLVDL--GKLSPQT 225


>gi|328791153|ref|XP_625219.3| PREDICTED: deoxynucleoside kinase [Apis mellifera]
          Length = 237

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 27/209 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +  EG  G+GKTT +S  K F     LQ     V + R  GGT   E     L+      
Sbjct: 27  VCIEGNIGSGKTTFLSHFKEFNNTTVLQE---PVELWRNVGGTNLLE-----LMYTDPKR 78

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +    ++ V       H    + P  +  + +   R    +   +      + + L+   
Sbjct: 79  YSFLFQSYVQLTMLQLHTYKSLMPYKIMERSVFSSRCFIENMKRKKLLHDVEVVILEDWY 138

Query: 122 EISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI--- 176
           +  ++  ++  D  + L    D+   R++ R    ES          +   ++   I   
Sbjct: 139 DWCIENADIETDLIVYLRTSPDVVYHRMKTRARKEESLV-------SLEYLKQLHNIHDE 191

Query: 177 --FLDIARNQPDRCHIVDSAHSFQSVATN 203
             +       P    ++D   + + +   
Sbjct: 192 WLYYQTLFTVPAPVLVLDGNKNLEEMVKE 220


>gi|91781888|ref|YP_557094.1| putative deoxynucleoside kinase [Burkholderia xenovorans LB400]
 gi|91685842|gb|ABE29042.1| Putative deoxynucleoside kinase [Burkholderia xenovorans LB400]
          Length = 226

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGA 64
           +++ EG  G GKT+    L +    +     +   P   P  E   R  +      +   
Sbjct: 19  YLAIEGPIGVGKTSLARRLAQRWSMQ----EMFERPQDNPFLERFYRDTVRYALPTQLH- 73

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
                 FA  R    ++V   A + G  L+ D F+   +  +A    ++    L+     
Sbjct: 74  ------FALQRAQQAQDV-SAAHLSGTPLIAD-FMTQKNDIFARLTLQEDEWQLYRALAA 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 126 RLEVSAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166


>gi|1361528|pir||H64211 guanylate kinase (EC 2.7.4.8) - Mycoplasma genitalium
          Length = 259

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 24/176 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           N G      G  G GK+T +  L    + +  Y +  T         E   +        
Sbjct: 73  NQGRIFVITGPSGVGKSTLVKALLDHFKEQLFYSISATTRKKRISEKEGIDYFFKDKDEF 132

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + +A +  A   +H    ++                 S A Q  +     L L+  
Sbjct: 133 ENLIKQDAFIEWACYNNHYYGTLK-----------------SQAEQAIKSGIN-LMLEIE 174

Query: 121 QEISVQ--EVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            + ++Q     P   +++ +        LKR++ R    E+      E+  +   +
Sbjct: 175 YQGALQVKSKYPHNVVLIFIKPPSMQELLKRLKKRNDEDETTIKKRLEQAKIEFQQ 230


>gi|226357196|ref|YP_002786936.1| deoxyadenosine kinase [Deinococcus deserti VCD115]
          Length = 200

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 15/152 (9%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G GKT+    L      +     V   P      E           D +  + + 
Sbjct: 2   VEGPIGVGKTSLAGRLAARYGAELNLEIVEENPFLARFYEQ---------PDAYSFQVQV 52

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISV 125
             F  +R   +  + +P L  G  ++ D +L   D  +A    +D+  HL+ D    +S 
Sbjct: 53  F-FLLSRFKQLSALSQPGLFSGN-VVSD-YLFDKDFIFAAMNLKDAEFHLYEDLYAHLSP 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +   PD  I L    D  L+R+  R    E  
Sbjct: 110 RLPTPDLVIYLRADTDELLRRIARRGRPFERD 141


>gi|225706560|gb|ACO09126.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial
           precursor [Osmerus mordax]
          Length = 355

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 30/223 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTRE----PGGTPAAEAARHV 53
             IS +G   +GK+     L   L          +Y   +T E    P     + +    
Sbjct: 58  KIISIDGNLASGKSALAQKLADKLGMLYMPEPDTHYLDKMTEEKVSLPSRFNGSCSLEKF 117

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QG 107
            L     +  +          RL    N +   +  G+ ++ +R   S   +      QG
Sbjct: 118 YLDPKASDGNSYRLQYWMYIMRLLQYSNALEHLITTGQGVVLERSPFSDMVFVEAMFKQG 177

Query: 108 ERDSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                     + ++ IS+ + + P   I +D P +   K+++        +   Y +   
Sbjct: 178 YIRKQCVEHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKQ-------SGKSYLQNVP 230

Query: 167 VMIHEKRRQIFLD--IARN-QPDRCHIVDSA--HSFQSVATNI 204
           +   +     +    + +  +       D+      + VA +I
Sbjct: 231 LAYLKSIEDAYKKTFLPKMSESAELLAYDTTQIQDIERVAEDI 273


>gi|224144020|ref|XP_002325159.1| predicted protein [Populus trichocarpa]
 gi|222866593|gb|EEF03724.1| predicted protein [Populus trichocarpa]
          Length = 520

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 69/228 (30%), Gaps = 51/228 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   L+ +     +    D+        T     A+  +          +
Sbjct: 34  ISGAPASGKGTQCELIVKKFGLVHISTGDLLRAEVSAETEIGNKAKEFM---NAGRLVPD 90

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                   ARL   +   +  L++G                  R S+Q   L+ L     
Sbjct: 91  EIVTAMVTARLSLEDAKEKGWLLDGY----------------PRSSAQAESLEKLN---- 130

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171
             V PD  ++LD+P +I + R   R    E+  +                   +     E
Sbjct: 131 --VRPDIYVVLDVPDEILIDRCVGRRLDPETGKIYHVKNFPPETEEMKARLITRPDDTEE 188

Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVATNILNIVWEL 211
           K +   LDI +   +            +D   S + V   I +++ ++
Sbjct: 189 KVKAR-LDIYKKNAEAILSTYSNIMVKLDGNRSKEVVFKEIDSLLSQV 235


>gi|38346873|emb|CAE04607.2| OSJNBb0004G23.5 [Oryza sativa Japonica Group]
          Length = 240

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 69/213 (32%), Gaps = 41/213 (19%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI+F  G  G+GK T    +        +  H++            R ++L+   +    
Sbjct: 60  FIAFVLGGPGSGKGTQCVRIASDF---GF-AHLSAGDLLRSEISTGRELILNIIKEGKIV 115

Query: 65  EAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +E              +IR A+   + K +L D F          R     +  + +  
Sbjct: 116 PSEI----------TVELIRKAMESSDAKRVLIDGF---------PRCEENRIAFERIT- 155

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RRQIFL 178
                  PD  I  D P D  +KR+  R   R    ++   +K + + E         + 
Sbjct: 156 ----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPVVDYYT 210

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                   + H +++  + + +   +  +   L
Sbjct: 211 SR-----GKVHKINATGTEEEIFGAVHKLFSSL 238


>gi|307199725|gb|EFN80204.1| Deoxynucleoside kinase [Harpegnathos saltator]
          Length = 249

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 71/213 (33%), Gaps = 35/213 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +  EG  G+GKTT +S  K+F      +V V  EP       +  ++L    +       
Sbjct: 15  VCIEGNIGSGKTTFLSYFKKF-----DNVTVLEEPVELWRDVSGTNLL---ELMYKDPTR 66

Query: 67  EAIVFAAA---RLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSL 120
            A +F +     +  +   + P+  +    + +R + S+  +       +   +  +  L
Sbjct: 67  YAYLFQSYVQLTMLQLHTCMTPSPFK----IMERSVYSAMCFVENLKRNNLLSNTEVSIL 122

Query: 121 QEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +E          +  D  + L    +I  +R++ R    E+          +   ++  Q
Sbjct: 123 EEWYNWSMKSAKIETDLIVYLKTTPEIVYERMKKRGRKEENTV-------SLEYLKQIHQ 175

Query: 176 -----IFLDIARNQPDRCHIVDSAHSFQSVATN 203
                ++    +  P     ++       +   
Sbjct: 176 LHDEWLYHQTLKPVPAPIITINGDRELHEMVEE 208


>gi|281207184|gb|EFA81367.1| deoxyadenosine kinase [Polysphondylium pallidum PN500]
          Length = 390

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 69/222 (31%), Gaps = 39/222 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GKTT  + L + L        +     G                  F  + 
Sbjct: 23  IGISGLIGVGKTTLCTALGKVLN-------LPTYYEGVIDNAYLEDFYKDPKKYSFPLQI 75

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHL--------F 116
             +     R    + +I     +GK  + DR  + DS +A       +            
Sbjct: 76  YLLN---QRFQQQQLIIW----QGKGGVQDRTIYEDSVFAKMLMESGNMEKRDYETYCSM 128

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175
             +L        +P+  + LD+     L R++ R    E    LDY    D    E  + 
Sbjct: 129 FRNLSNFMR---IPNLIVHLDVSPQESLNRIRLRNRDCEKGITLDYLVALDRAYQEFLQD 185

Query: 176 I--FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           I  ++ + R         D+    + +A  I     E ++ R
Sbjct: 186 ISKYIAVIRVNWGEYK--DA----EELAAEIKK---EYLKMR 218


>gi|325126635|gb|ADY85965.1| Deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 232

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 49/231 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++  ++L ++L             G  P  E+     +L     +    
Sbjct: 4   IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
              + +F      H    I+ AL +   +L DR  + DS + +     G  +  +    D
Sbjct: 51  TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYD 106

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
            L E  ++E+       PD  + +++  +  + R+Q R    E    D   E      ++
Sbjct: 107 ELLESMMKELERMPKRHPDLLVHINVSYETMISRIQKRGRSYEQLSFDPTLE----DYYK 162

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +  + +     +    P    ++D  H            V   I   + ++
Sbjct: 163 RMLRYYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211


>gi|317486953|ref|ZP_07945763.1| phosphonate metabolism protein/1,5-bisphosphokinase PhnN [Bilophila
           wadsworthia 3_1_6]
 gi|316921828|gb|EFV43104.1| phosphonate metabolism protein/1,5-bisphosphokinase PhnN [Bilophila
           wadsworthia 3_1_6]
          Length = 190

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 42/221 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGV 59
           M  G  +   G  G+GK + +  L+  L  +   V   R     P  A+  RH+ +S   
Sbjct: 1   MRQGQLVYVMGASGSGKDSLLQALRPRL--RGVPVAFARRYITRPLSAKGERHIAVSP-- 56

Query: 60  DEFGAEAEAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           + F A A +  F      H     +   +   L  G ++L               + S+ 
Sbjct: 57  ERFAAMAASGEFMMDWRSHGLRYGIGKGVETTLAHGGVVLM--------------NGSRE 102

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              ++L+      ++P   +++++   +   R+  R         +   R  +       
Sbjct: 103 YLPEALRRF--PSLVP---VLVEVDASVLRARLLARGREPGGDIEERIARASMP------ 151

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                     PD    +D++            +V  L++++
Sbjct: 152 -------AEYPDGVLRIDNSGELAESTAAFYRMVARLIEEK 185


>gi|145341046|ref|XP_001415627.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575850|gb|ABO93919.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 210

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 41/201 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  + + R      L     D+       G+        ++    +      
Sbjct: 34  GGPGAGKGTQCANIVRDYAFVHLSAG--DLLRAHMKSGSKDGNMVAEMIKQGQIVP-SEV 90

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              ++  A R              GK    DRFL   +    E         D+ +  + 
Sbjct: 91  TVNLLLEAMRA------------SGK----DRFLIDGFPRNKENR-------DAWETTAG 127

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182
            +   D  +  D P ++  +R+  R   R    +D  +++     E        +  +  
Sbjct: 128 FDC--DFVLFFDCPEEVMTERLLGRNEGRTDDNIDTIKKRFKTFRESSMPVINYYDSL-- 183

Query: 183 NQPDRCHIVDSAHSFQSVATN 203
              ++   V+S  S + V   
Sbjct: 184 ---NKVCSVNSDQSPEDVYAQ 201


>gi|242398400|ref|YP_002993824.1| Signal recognition particle GTPase [Thermococcus sibiricus MM 739]
 gi|242264793|gb|ACS89475.1| Signal recognition particle GTPase [Thermococcus sibiricus MM 739]
          Length = 300

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G GKTT I+ L  +L++    V +      T  A A   V         G + 
Sbjct: 107 IVFVGFNGGGKTTTIAKLANWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 162

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + +       + I  A   G  ++L D            R+      +D +++I+ 
Sbjct: 163 IKHGYKSDPAAVAYDSIEHAKARGIDVVLVD---------TAGRNELNRNLMDEMKKIA- 212

Query: 126 QEVMPDCTII 135
           +   PD  I 
Sbjct: 213 RVTKPDLVIF 222


>gi|281426113|ref|ZP_06257026.1| hypothetical protein HMPREF0971_03097 [Prevotella oris F0302]
 gi|281399689|gb|EFB30520.1| hypothetical protein HMPREF0971_03097 [Prevotella oris F0302]
          Length = 361

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 6/108 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I   G   AGKTT +  +        Y V    E     +     ++  +  + 
Sbjct: 1   MKTVKKIVLTGGPCAGKTTALVKVIEHFSSLGYKVFTIPEVPTMFSQSGMDYLTTNKKLF 60

Query: 61  EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A  E  +    +   +         E  +++CDR      AY 
Sbjct: 61  YEGEKATLEVQLALEDKFQRMAE----QCEEPAVIICDRGAMDISAYM 104


>gi|125541347|gb|EAY87742.1| hypothetical protein OsI_09157 [Oryza sativa Indica Group]
          Length = 222

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 47/213 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 34  GGPGSGKGTQCANIVEHF---GF--------IHLSAGDLLRAEIKSGSENG--------- 73

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125
                      +I   + EGKI+  +            +  +    +D          + 
Sbjct: 74  ----------TMIENMIKEGKIVPSE-VTIKLLQEAMIKSGNDKFLIDGFPRNEENRAAF 122

Query: 126 QE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179
           +    + P   +  D   +   +R+  R   R    ++   ++  +  E      + +  
Sbjct: 123 ENVTKITPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYY-- 180

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              N  D+   +D+A     V  ++  I    V
Sbjct: 181 ---NAKDKVKKIDAAKPIPEVFEDVKAIFAPYV 210


>gi|239789009|dbj|BAH71154.1| ACYPI006573 [Acyrthosiphon pisum]
 gi|239789011|dbj|BAH71155.1| ACYPI006573 [Acyrthosiphon pisum]
          Length = 151

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 10/97 (10%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI-ARNQPDRC 188
           D  I L    +I  +R++ R    E    L+Y +     +HE     +L++   + P   
Sbjct: 25  DLIIYLRTDPEIAYQRIKTRNRSEEKNISLEYIQH----LHE-LHDKWLNVHITDVPKNI 79

Query: 189 --HIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
              IVD+  S   V       + +L+ K  S L   K
Sbjct: 80  PVVIVDANQSMDLVRKQ-FKGIRDLITKNASALGKLK 115


>gi|212374986|pdb|3DMD|B Chain B, Structures And Conformations In Solution Of The Signal
           Recognition Particle Receptor From The Archaeon
           Pyrococcus Furiosus
 gi|212374987|pdb|3DMD|A Chain A, Structures And Conformations In Solution Of The Signal
           Recognition Particle Receptor From The Archaeon
           Pyrococcus Furiosus
 gi|212374988|pdb|3DMD|C Chain C, Structures And Conformations In Solution Of The Signal
           Recognition Particle Receptor From The Archaeon
           Pyrococcus Furiosus
 gi|213424254|pdb|3E70|C Chain C, Structures And Conformations In Solution Of The Signal
           Recognition Particle Receptor From The Archaeon
           Pyrococcus Furiosus
          Length = 328

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 18/132 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+   G  G+GKTT I+ L  +L+   + V +      T  A A     L       G 
Sbjct: 133 MFV---GFNGSGKTTTIAKLANWLKNHGFSVVIAA--SDTFRAGAIEQ--LEEHAKRIGV 185

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     + A       + I+ A   G  ++L D            R  +    +D +++I
Sbjct: 186 KVIKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKI 236

Query: 124 SVQEVMPDCTII 135
           + +   P+  I 
Sbjct: 237 A-RVTKPNLVIF 247


>gi|219850610|ref|YP_002465043.1| adenylate kinase [Chloroflexus aggregans DSM 9485]
 gi|219544869|gb|ACL26607.1| adenylate kinase [Chloroflexus aggregans DSM 9485]
          Length = 222

 Score = 47.7 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 72/250 (28%), Gaps = 71/250 (28%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVL 54
           M  G  I   G  GAGKTT  +LL +        V  T +         +P       +L
Sbjct: 1   MTVGKTILLIGPPGAGKTTIANLLAQ---ETGIAVIATGQLLRTEIRAQSPIGRQIAALL 57

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
               +      AE +    ARL      I P+       L D +  S  A     D+   
Sbjct: 58  EQGQLVPDAVMAELM---RARLQ----TILPSQS----CLLDGYPRS-IAQAQMLDTMLA 105

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH---- 170
                +             I+LDL     + R+  R   R     D      V +H    
Sbjct: 106 ELRRQVN----------VVIVLDLSETAIMHRLGGRRVCRSPDGRD------VTLHIDDT 149

Query: 171 EKRRQIFLD---IARNQPDR---------------------------CHIVDSAHSFQSV 200
           E+  Q       +++   DR                            H +++  S + V
Sbjct: 150 EQVAQCLAKGGVLSQRDDDRPEVIRARLRLYEQETTPVLDFYRHRGLVHHINADQSPEMV 209

Query: 201 ATNILNIVWE 210
              I  ++ +
Sbjct: 210 VAAINQVLQD 219


>gi|71896367|ref|NP_001025532.1| deoxycytidine kinase, gene 1 [Xenopus (Silurana) tropicalis]
 gi|60649673|gb|AAH90567.1| dck protein [Xenopus (Silurana) tropicalis]
          Length = 265

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 85/242 (35%), Gaps = 41/242 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+    ++++V    + R        +    +         L
Sbjct: 26  ISIEGNIAAGKSTFVNILKKA--NEDWEVVPEPIARWCNIQSCKDEFEELTTSQKSGGNL 83

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         ++    P L   + +  DR++ +S  
Sbjct: 84  LQMMYEKPERWSFTFQSYACLSRIRAQLKALGGKLKEAENPVLFFERSVYSDRYIFASNL 143

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +      ++  D  I L    +  L R+ +R    E    
Sbjct: 144 YEAECMNETEWTVYQDWHDWMNSQFGADLELDGIIYLRAIPEKCLNRIYSRGREEEQGIP 203

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV---ATNILNIVWE 210
           ++Y E+     +  + H   R  F  + +  P     +D    F+       +++  V E
Sbjct: 204 MEYLEKLHYKHESWLHHRTMRTDFEYL-QEIP--ILTLDVNEDFKDNKQKQESLIEKVKE 260

Query: 211 LV 212
            +
Sbjct: 261 FL 262


>gi|281347674|gb|EFB23258.1| hypothetical protein PANDA_008200 [Ailuropoda melanoleuca]
          Length = 253

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 32/187 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGT--PAAEA 49
           I+ EG   +GKTT +++LK+  +   ++V                   E   +       
Sbjct: 24  IAIEGNIASGKTTFVNILKQVCED--WEVVPEPVARWCNVQNAQGDCEELTTSQESGGNV 81

Query: 50  ARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSY 103
            + +        F  ++ A + +  R         +++  +P L   + +  DR++ +S 
Sbjct: 82  LQMMYEKPERWSFTFQSYACL-SRIRAQLACLDGKLKDAEKPVLFFERSIYSDRYVFASN 140

Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157
            Y+ E  +     +     D + +   Q ++ D  I L    +  L R+  R    E   
Sbjct: 141 LYESECMNETEWTIYQDWHDWMNQQFGQSLVLDGIIYLRATPEKCLNRIYLRGRNEEQGI 200

Query: 158 CLDYFER 164
            L+Y E+
Sbjct: 201 PLEYLEK 207


>gi|150383504|sp|Q7ZX23|KCY_XENLA RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
          Length = 193

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 61/217 (28%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    + +                   A +  R                   
Sbjct: 10  GGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----------- 47

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + +GKI+       L  R ++ + A+   +            D+
Sbjct: 48  -------QYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDN 100

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ          D    +  D   +  ++R   R      +  +    + +   EKR Q 
Sbjct: 101 LQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL---EKRIQT 154

Query: 177 FLD----IARNQPDR--CHIVDSAHSFQSVATNILNI 207
           +L     I      R     VD++ S   V T + NI
Sbjct: 155 YLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNI 191


>gi|315230336|ref|YP_004070772.1| AMP/CMP kinase [Thermococcus barophilus MP]
 gi|315183364|gb|ADT83549.1| AMP/CMP kinase [Thermococcus barophilus MP]
          Length = 180

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 75/224 (33%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I+  G  G GKTT   LL   L    Y  V + +   G    E           DE  
Sbjct: 1   MIIAVSGTPGVGKTTVAKLLAEKL---GYMYVDLKKFAIGHEIGEI--------KGDELE 49

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E + + +           I   L +GK ++ D                           
Sbjct: 50  VEIDELAYF----------IEKEL-KGKNVVLDGH------------------------- 73

Query: 124 SVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------KDVMIHEKRR 174
            +  +MP D  IIL L   I  +R++ R   RE    +  E         + +  HE   
Sbjct: 74  -LSHLMPADQVIILRLHPKIIGERLKERGYSREKISEN-VEAELVDVCLVEAIDTHENVI 131

Query: 175 QIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
           +               VD+   + + V   IL+++ + V+KRV 
Sbjct: 132 E---------------VDTTGKTPEQVVEEILDLLNKGVKKRVG 160


>gi|268370128|ref|NP_001161245.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial precursor [Nasonia vitripennis]
          Length = 420

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 83/233 (35%), Gaps = 38/233 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-----TPAAEAARHV--LLSC 57
             I  +G   +GK+     L + L ++ +D     +P       T      R +  LL  
Sbjct: 80  KLIVIDGQVASGKS----KLAQELAKE-FDFLYLPQPTFDDLLITKWGFDVRQLDHLLPK 134

Query: 58  GVDEFGAE------------AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY 103
               +  E            A  +     R     + +      G+ ++  R  + D+ +
Sbjct: 135 DAQSWDIERFLQNPHDRNTIAMQLYMYMMRQKQYIDSLAHIFCTGQGVVTVRSPWSDAVF 194

Query: 104 A---YQGERDSSQHLFL--DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           A   YQ +  S +      D+ +      + P   I LD+PVD+ L+ ++ R    E   
Sbjct: 195 AKAMYQSKFISPKGYEAHTDACKASLHNYLKPHVIIYLDVPVDLTLQNIKKRGLPHEVNS 254

Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAH--SFQSVATNILNI 207
               E+    I E  ++ +L       + CH++  D +     + V  ++ N+
Sbjct: 255 KVLNEKYLSDIEENYKRDYL---AKLTENCHLLIYDWSQGGDIEVVVEDLENL 304


>gi|331703389|ref|YP_004400076.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|256383796|gb|ACU78366.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384626|gb|ACU79195.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455973|gb|ADH22208.1| deoxyguanosine kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
 gi|328801944|emb|CBW54098.1| Deoxyguanosine kinase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 205

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 33/217 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T  + + + L  + +   V   P      +  +  +    +    A +
Sbjct: 3   IAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 62

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + +     +  ++EN+I    L+E  I     F+  +Y       +  + ++D    + +
Sbjct: 63  KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQTDYNTYIDFYNNVVL 113

Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +  P      D  I L +     + R++ R    E               E   + + 
Sbjct: 114 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLI-------GEEYWETLNKNYE 166

Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  +      P    +VD+      V T I  I+ +L
Sbjct: 167 EFYKQNVYDFP--FFVVDAELD---VKTQIELIMNKL 198


>gi|223974159|gb|ACN31267.1| unknown [Zea mays]
          Length = 244

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 48/218 (22%)

Query: 6   FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI+F  G  G+GK T  + +        L   +   H      G+   E    ++    +
Sbjct: 61  FIAFVLGGPGSGKGTQCTKIASDFGFAHLSAGDILRHEIA--SGSEKGELILEIIKEGRI 118

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                            +    +IR A+     K +L D F                   
Sbjct: 119 VP--------------SEITVELIRKAMEMNNAKRVLIDGFPRC------------EENR 152

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173
            + + I      PD  I  D P D  +KR+  R   R    ++   +K + + E      
Sbjct: 153 IAFERIV--GTEPDIVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 209

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +         + H +++  +   +   +  +   L
Sbjct: 210 VDYYSSR-----GKVHKINATGTADEIFEAVRRLFSSL 242


>gi|255557953|ref|XP_002520005.1| Thermosensitive gluconokinase, putative [Ricinus communis]
 gi|223540769|gb|EEF42329.1| Thermosensitive gluconokinase, putative [Ricinus communis]
          Length = 186

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 49/213 (23%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I   G+ GAGK+T   +L + L+ K  D            +++ R     C     
Sbjct: 6   QGKAIVIMGVSGAGKSTIGEMLAKDLKCKFLDA-------DDFHSQSNRE--KMCQGIPL 56

Query: 63  GAEAEAIVFAAAR---LDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQ 113
             E         R   L  ++  +R +L+ GKI++       +R+       +  R +  
Sbjct: 57  SEE--------DRIPWLQSLQEAVRESLIVGKIVILGCSSLQNRY------REILRSADP 102

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +  L S   +          ++LD+  ++   R+  R +  +        +  + +    
Sbjct: 103 NYQLGSYVSVVKF-------VLLDVNAEVLAARLNKRAAEGKHFMPATLLQSQLDL---- 151

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
                 +  +  +  + VD+A S +++   I +
Sbjct: 152 ------LHVDDSEGIYKVDAAQSPRAIVDAIKS 178


>gi|104774799|ref|YP_619779.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116514928|ref|YP_813834.1| deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|103423880|emb|CAI98921.1| Deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|116094243|gb|ABJ59396.1| Deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 232

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 49/231 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++  ++L ++L             G  P  E+     +L     +    
Sbjct: 4   IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118
              + +F      H    I+ AL +   +L DR  + DS + +     G  +  +    +
Sbjct: 51  TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYE 106

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
            L E  ++E+       PD  + +++  +  ++R+Q R    E    D   E      ++
Sbjct: 107 ELLENMMKELERMPKRHPDLLVHINVSYETMIRRIQKRGRSYEQLSFDPTLE----DYYK 162

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +  + +     +    P    ++D  H            V   I   + ++
Sbjct: 163 RMLRYYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211


>gi|323524825|ref|YP_004226978.1| deoxynucleoside kinase [Burkholderia sp. CCGE1001]
 gi|323381827|gb|ADX53918.1| deoxynucleoside kinase [Burkholderia sp. CCGE1001]
          Length = 226

 Score = 47.3 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G GKT+    L +    +     +   P   P  E               A+
Sbjct: 19  YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLE---RFYRDTARYALPAQ 71

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
              + FA  R    + V   A + G  L+ D F+   +  +A    ++   +L+      
Sbjct: 72  ---LHFALQRAQQAQEV-SAAQVAGTPLIAD-FMTQKNDIFARLTLQEDEWNLYRALAAR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFSRIQKRAVPMELQISDAY 166


>gi|28493501|ref|NP_787662.1| adenylate kinase [Tropheryma whipplei str. Twist]
 gi|28572386|ref|NP_789166.1| adenylate kinase [Tropheryma whipplei TW08/27]
 gi|46396109|sp|Q83G05|KAD_TROWT RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|46396110|sp|Q83I60|KAD_TROW8 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|28410517|emb|CAD66903.1| adenylate kinase [Tropheryma whipplei TW08/27]
 gi|28476543|gb|AAO44631.1| adenylate kinase [Tropheryma whipplei str. Twist]
          Length = 186

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 41/206 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT--REPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GK T   L++  L      V  T            A R ++ S G          
Sbjct: 7   GPPGSGKGTQCGLIQSRL---GISVIATGDVFRERMKTDMALRDIVSSGGYVSDSTT--- 60

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ-E 127
                        ++   L +  +        S +   G   + Q   LD L+    +  
Sbjct: 61  -----------NRIVEDCLDKEDV-------SSGFVLDGYPRTLQQ--LDFLEGFLKRRA 100

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI------A 181
           +  D    L++  D+ ++R++ R S       D        +  +R +I+ ++      A
Sbjct: 101 LTLDAVFSLEVATDLLIERLRAR-SKESGRTDDR-----DSVIARRLEIYTEMTLPIIDA 154

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207
             +    H +D++   + V  +I ++
Sbjct: 155 CEEKGLLHRIDASKGIEEVFQSIKDV 180


>gi|213963508|ref|ZP_03391761.1| protein containing hppk and dnk domain protein [Capnocytophaga
           sputigena Capno]
 gi|213953788|gb|EEB65117.1| protein containing hppk and dnk domain protein [Capnocytophaga
           sputigena Capno]
          Length = 375

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 21/183 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG  G+GKTT  + +      K      +  P      E  +         E   
Sbjct: 179 KYIAIEGNIGSGKTTLATKIAEDFNAKLILEQFSDNPFLPKFYENPKQY---GFTLEMSF 235

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122
             E       R   +   +    +  + ++ D  +  S  +     +     L       
Sbjct: 236 LTE-------RYQQMREQLAQTDLFKEFVVSDYDIFKSLIFSKVTLTDDEFMLYRKLFYI 288

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181
           +  Q + PD  + L    D  ++ ++ R    E     DY         +K    +LD  
Sbjct: 289 LYSQIIKPDLYVFLYQNTDRLIENIKKRGREYEQNISPDYL--------KKIHYGYLDFI 340

Query: 182 RNQ 184
           +  
Sbjct: 341 QKN 343


>gi|126031079|pdb|2JAS|A Chain A, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Bound Datp
 gi|126031080|pdb|2JAS|B Chain B, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Bound Datp
 gi|126031081|pdb|2JAS|C Chain C, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Bound Datp
 gi|126031082|pdb|2JAS|D Chain D, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Bound Datp
 gi|126031083|pdb|2JAS|E Chain E, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Bound Datp
 gi|126031084|pdb|2JAS|F Chain F, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Bound Datp
          Length = 206

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 33/217 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T  + + + L  + +   V   P      +  +  +    +    A +
Sbjct: 4   IAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 63

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + +     +  ++EN+I    L+E  I     F+  +Y       +  + ++D    + +
Sbjct: 64  KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQTDYNTYIDFYNNVVL 114

Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +  P      D  I L +     + R++ R    E               E   + + 
Sbjct: 115 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLI-------GEEYWETLNKNYE 167

Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  +      P    +VD+      V T I  I+ +L
Sbjct: 168 EFYKQNVYDFP--FFVVDAELD---VKTQIELIMNKL 199


>gi|260795047|ref|XP_002592518.1| hypothetical protein BRAFLDRAFT_118931 [Branchiostoma floridae]
 gi|229277738|gb|EEN48529.1| hypothetical protein BRAFLDRAFT_118931 [Branchiostoma floridae]
          Length = 481

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/238 (10%), Positives = 66/238 (27%), Gaps = 60/238 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK+   SL+                          +  +            
Sbjct: 271 IVLLGPTGAGKSVQASLIANK-----------YNITNLSCGALIKEAIADETK------- 312

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL--------LCDR-FLDSSYAYQGERDSSQHLFL 117
                       +   I+P +  G ++        L DR     + +             
Sbjct: 313 ------------IGEAIKPYVERGMMVPDNLVMKVLSDRLSRLDAVSRGWVMHGFPRT-R 359

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYFE 163
           +  + +    + P+    LD+P D  ++R+  R +               R +       
Sbjct: 360 EQAESLKDANLDPNRVFFLDIPNDSVMERLVLRRTDPVTGERYHFLYNPPRTNEVKARLH 419

Query: 164 R----KDVMIHEKR--RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +    ++  + ++      + +   +  +    +++     +V   I +++   + K+
Sbjct: 420 QHPKDEEEAVKKRLIEYHAYAEEIADFYEAAMRINADQDPHTVFEFIESMIVNPLPKK 477


>gi|62122895|ref|NP_001014374.1| deoxycytidine kinase [Danio rerio]
 gi|61403525|gb|AAH91889.1| Zgc:110540 [Danio rerio]
 gi|182891916|gb|AAI65516.1| Zgc:110540 protein [Danio rerio]
          Length = 264

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 68/194 (35%), Gaps = 36/194 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----------HVTREPGGTPAAEAAR 51
              + +S EG   AGK+T + LL+R  +   ++V            T E G    + + +
Sbjct: 20  KRAMKVSIEGNIAAGKSTFVRLLERASEE--WEVIPEPIGKWCNVQTTENGYEELSTSQK 77

Query: 52  H--VLLSCGVDEFGAEAEAIVFAA-------------ARLDHVENVIRPALMEGKILLCD 96
               LL    D+    +      A             A+L   E  ++        +  D
Sbjct: 78  SGGNLLQMLYDKPSRWSYTFQTYACLSRVRSQLQPPSAKLQQAEKPVQFFERS---VYSD 134

Query: 97  RFLDSSYAYQGERDSSQHLFL--DSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRY 151
           R++ +S  ++    +     +  D    +  Q    +  D  I L    +  ++R+Q R 
Sbjct: 135 RYVFASNLFESGDLNETEWAIYQDWHSWLLTQFESQIELDAMIYLRADPERCMQRLQFRG 194

Query: 152 SLRESA-CLDYFER 164
              E    LDY E+
Sbjct: 195 REEEQGIPLDYLEK 208


>gi|15674338|ref|NP_268512.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I) subunit
           [Streptococcus pyogenes M1 GAS]
 gi|71909917|ref|YP_281467.1| deoxyadenosine kinase/deoxyguanosine kinase [Streptococcus pyogenes
           MGAS5005]
 gi|13621423|gb|AAK33233.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I) subunit
           [Streptococcus pyogenes M1 GAS]
 gi|71852699|gb|AAZ50722.1| deoxyadenosine kinase/deoxyguanosine kinase [Streptococcus pyogenes
           MGAS5005]
 gi|126238224|gb|ABO07416.1| deoxyadenosine kinase [Streptococcus pyogenes]
          Length = 213

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK++  + L   L     DV         P  +                
Sbjct: 1   MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113
           +  A +     L+     I+ A      +L DR +     +               D  Q
Sbjct: 47  KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105

Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
            L  + L+E+  + +  PD  I +D+  D  L+R++ R    E    +   E+     + 
Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIERRGRSFEQVDGNPSLEQ----YYH 161

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211
           +    +     +    P     +D              +V   I   + EL
Sbjct: 162 QVHGEYPTWYEDYEVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210


>gi|226491249|ref|NP_001149421.1| LOC100283047 [Zea mays]
 gi|195627122|gb|ACG35391.1| adenylate kinase [Zea mays]
          Length = 245

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 48/218 (22%)

Query: 6   FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI+F  G  G+GK T  + +        L   +   H      G+   E    ++    +
Sbjct: 62  FIAFVLGGPGSGKGTQCTKIASDFGFAHLSAGDILRHEIA--SGSEKGELILEIIKEGRI 119

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                            +    +IR A+     K +L D F                   
Sbjct: 120 VP--------------SEITVELIRKAMEMNNAKRVLIDGFPRC------------EENR 153

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173
            + + I      PD  I  D P D  +KR+  R   R    ++   +K + + E      
Sbjct: 154 IAFERIV--GTEPDIVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 210

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +         + H +++  +   +   +  +   L
Sbjct: 211 VDYYSSR-----GKVHKINATGTADEIFEAVRRLFSSL 243


>gi|289743077|gb|ADD20286.1| mitochondrial thymidine kinase 2/deoxyguanosine kinase [Glossina
           morsitans morsitans]
          Length = 249

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 27/204 (13%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66
            EG  G+GKTT ++      ++    V +  EP          ++L  +    +++    
Sbjct: 25  IEGNIGSGKTTFLN----HFKQFEDQVCLITEPVDKWRNLHEFNLLSLMYSQPEKWAMPF 80

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-----LQ 121
           ++ V       H     +P      + L +R L SS  Y    +  +   ++      LQ
Sbjct: 81  QSYVNLTMLQSHTMKTDKP------VKLMERSLYSS-KYCFVENLYKSKLMEPAMYHILQ 133

Query: 122 EISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           E          +  D  + L    DI  KR+Q R    E      + ++   +HE    I
Sbjct: 134 EWYKFIEESIHIRADLIVYLRTSPDIVYKRIQKRARSEECNISLKYLQELHDLHE----I 189

Query: 177 FLDIARNQPDRCHIVDSAHSFQSV 200
           +L   +    +  ++++    + +
Sbjct: 190 WLMANQGYNSKVIVLNADLDLEQI 213


>gi|86159533|ref|YP_466318.1| ABC transporter, ATPase subunit [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776044|gb|ABC82881.1| ABC transporter, ATPase subunit [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 310

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 69/245 (28%), Gaps = 58/245 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF--GAEAE 67
           G +GAGKTT I  L   L     +    R  G  P + A R  L L             E
Sbjct: 47  GPDGAGKTTAIRALAGLLALDGGEA---RVLGADPLSGANRERLGLMPQQYSLYRDLTVE 103

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLC--DRFLD------SSYAY-------------- 105
             +   ARL  +   +     E  + +   DRF D      S   Y              
Sbjct: 104 ENLHFFARLYVLPRAVYRERKERLLAITRLDRFTDRRADALSGGMYKKLALACALLHEPE 163

Query: 106 --------QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP--------VDIGL-KRVQ 148
                    G    S+      L E          T+++  P          + L  R +
Sbjct: 164 VLLLDEPTNGVDPVSRRELWALLHEFVHGG----MTVLVSTPYMDEAERCSRVALVHRGR 219

Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP---------DRCHIVDSAHSFQS 199
                   A +D FE +   +H   R+         P          R  +V +  +   
Sbjct: 220 ALLDGEPGALIDEFEDEAYEVHGGNRERLDAALAAHPAVLAASPAGARLKVVVARGARDE 279

Query: 200 VATNI 204
           VA  I
Sbjct: 280 VARAI 284


>gi|217977941|ref|YP_002362088.1| sulfate adenylyltransferase, large subunit [Methylocella silvestris
           BL2]
 gi|217503317|gb|ACK50726.1| sulfate adenylyltransferase, large subunit [Methylocella silvestris
           BL2]
          Length = 647

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 47/209 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L++ +L                      R +LL       G     
Sbjct: 468 FTGLSGSGKSTISNLVESWLYAHG-----------------MRTILLDGDNIRHGLNKNL 510

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +     G I+LC     S  +            LD  + +  
Sbjct: 511 GFTEVDRVENIRRVGEVAKLMTDAGLIVLC-----SFISPFNAERQLVRDLLDDGEFLE- 564

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                   I +D P++  + R       +  A        ++       Q +   A   P
Sbjct: 565 --------IFVDTPIEDCIARDPKGLYKKALAG-------EIKNFTGVDQRYE--APQNP 607

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +     D   + Q  A  I   V EL+++
Sbjct: 608 EMIVARDG-QTPQQAAAAI---VKELIRR 632


>gi|290968489|ref|ZP_06560028.1| guanylate kinase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781485|gb|EFD94074.1| guanylate kinase [Megasphaera genomosp. type_1 str. 28L]
          Length = 205

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 26/173 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SGL I   G  GAGK T    L+    + +Y + +T  P      E   +        E 
Sbjct: 4   SGLLIVVSGPSGAGKGTICDALRARFPQVHYSISMTTRPPRPGEKEGVNYYFTDTAHFEA 63

Query: 63  GAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               +A +  A   DH     +  +  AL  G+ +L +  +D   A Q  +   Q     
Sbjct: 64  LLAQDAFLEHAKVYDHYYGTPKQYVYDALARGEHVLLE--IDIQGAMQVRKHYPQC---- 117

Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
                          + + +P    +   R+  R++  E       ++    +
Sbjct: 118 -------------LCVYI-VPPNRQVLAARLHGRHTDSEEVIAGRLQKTQAEL 156


>gi|170591931|ref|XP_001900723.1| Deoxynucleoside kinase family protein [Brugia malayi]
 gi|158591875|gb|EDP30478.1| Deoxynucleoside kinase family protein [Brugia malayi]
          Length = 440

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 26/180 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---------- 54
             I  EG  G+ K+     L   L           E          R+            
Sbjct: 78  KLIVVEGNIGSNKSDMACSLADRLGFHFIPEFQMDEVLVDRFGNDYRNYYHLFPKSFRLF 137

Query: 55  ------LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
                    G DE     + I+    + D   N I   +  G+ ++ +R   + + +   
Sbjct: 138 DMNMFYKDPGNDETAKMRDRIL--RCKFDQYLNAIAHIMNTGQGVVLERTPHTDFIFANA 195

Query: 109 RDSSQHL--------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             +  ++        +++    I      P   I LD+PVD  L+ +  + +  + A +D
Sbjct: 196 CRAKNYIGPEYFTYYYIERKNMIPNCRFWPHLVIYLDVPVDKCLQNIYQQGNADKIAIID 255


>gi|325964702|ref|YP_004242608.1| adenylate kinase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470789|gb|ADX74474.1| Adenylate kinase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 225

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 72/216 (33%), Gaps = 37/216 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSCGVDEFGAE 65
           G  G+GK T    L R           T E   +  +E           L  G       
Sbjct: 36  GPPGSGKGTQAEQLARHF---GIPAVSTGEIFRSNVSEETELGNQAASYLDGGDFVPDHL 92

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A+V         + ++   L EG   L D +          R + Q   LD++  ++ 
Sbjct: 93  TNALV--------RDRLVDSDLQEGF--LLDGY---------PRTAPQVQELDTM--LAN 131

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           Q    D  I L  P  +  +R++ R     R    +D F R+  + H +  +    +   
Sbjct: 132 QGFALDAVIELHAPDAVLEQRMRRRAADQGRSDDTVDVFRRRLDLYHRETHE----VVSV 187

Query: 184 QPDR-CHI-VDSAHSFQSVATNILNIVWELVQKRVS 217
              R   + VD +     +    +  V + ++ R+S
Sbjct: 188 YAGRGILVSVDGSGEPGDITGAAITAVEKFLRGRLS 223


>gi|161622541|ref|YP_001595169.1| hypothetical protein EpJS98_gp040 [Enterobacteria phage JS98]
 gi|238695196|ref|YP_002922389.1| hypothetical protein EpJS10_0040 [Enterobacteria phage JS10]
 gi|52139861|gb|AAU29232.1| hypothetical protein EpJS98_0040 [Enterobacteria phage JS98]
 gi|220029332|gb|ACL78266.1| hypothetical protein EpJS10_0040 [Enterobacteria phage JS10]
          Length = 178

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 27/123 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN    I  +G + +GK+T I  L   L  K Y +         P     + + L    D
Sbjct: 1   MNP-KIIVIDGPDNSGKSTLIKNL---LSNKKYRLI------DFPKKINGKCISLGTDND 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +                 +   +   L    + + DR   S+  Y G        +++ L
Sbjct: 51  K----------------ALVETLYKFLDPNFVYILDRGYPSNIVYSGFLRGEMDPYVE-L 93

Query: 121 QEI 123
           ++ 
Sbjct: 94  EDW 96


>gi|83816359|ref|YP_445088.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Salinibacter
           ruber DSM 13855]
 gi|83757753|gb|ABC45866.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Salinibacter
           ruber DSM 13855]
          Length = 261

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 15/155 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  GAG TT   LL    +     V    E    P  E           + +  +
Sbjct: 56  YVAIEGAIGAGTTTLTELLADRFEAD--PVLERFE--DNPFLERFYE-----DRERWAFQ 106

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
            + + F A+R    + +    L     +  D +    D  +A Q        L+    + 
Sbjct: 107 TQ-LAFLASRFRQQKELSERDLFRDFAV-SD-YTFDKDRIFARQTLSGDELQLYESLFRL 163

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +      PD  + L    +  L+ ++ R    E  
Sbjct: 164 MEPTVPSPDLVVYLRSSPERLLQNIEKRDRPYERD 198


>gi|82702009|ref|YP_411575.1| deoxynucleoside kinase [Nitrosospira multiformis ATCC 25196]
 gi|82410074|gb|ABB74183.1| Deoxynucleoside kinase [Nitrosospira multiformis ATCC 25196]
          Length = 213

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 15/154 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ EG  G GKT+    +  +   +         P      E  R   L           
Sbjct: 9   IAVEGPIGVGKTSLARRMAEYAGGQLLLEKPEENPFLGKFYEDIRRYALPTQ-------- 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEI 123
             + F   R + ++++ +  L   K  + D FL   D  +A     ++   L+    + +
Sbjct: 61  --LFFLFQRANQLQDLTQIDLFT-KTTISD-FLLDKDPLFAGLTLNNAEYELYRKIYRHL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
             +   PD  I L        +RV+ R S  E  
Sbjct: 117 QPEAFTPDLVIYLQASPATLAERVKRRGSSYEKN 150


>gi|2506792|sp|P47353|KGUA_MYCGE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
          Length = 240

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 24/176 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           N G      G  G GK+T +  L    + +  Y +  T         E   +        
Sbjct: 54  NQGRIFVITGPSGVGKSTLVKALLDHFKEQLFYSISATTRKKRISEKEGIDYFFKDKDEF 113

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   + +A +  A   +H    ++                 S A Q  +     L L+  
Sbjct: 114 ENLIKQDAFIEWACYNNHYYGTLK-----------------SQAEQAIKSGIN-LMLEIE 155

Query: 121 QEISVQ--EVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            + ++Q     P   +++ +        LKR++ R    E+      E+  +   +
Sbjct: 156 YQGALQVKSKYPHNVVLIFIKPPSMQELLKRLKKRNDEDETTIKKRLEQAKIEFQQ 211


>gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus
           NA1]
 gi|229558607|sp|B6YSS1|SRP54_THEON RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus
           NA1]
          Length = 448

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 17/127 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT I+ L R+ Q++ Y V +       P A +  + ++   G++ FG   E  
Sbjct: 107 GIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 +   +  +     +G  I++ D            R   +   ++ +++IS   +
Sbjct: 165 ---KDAIKLAKEGVEHFREKGVDIIIVD---------SAGRHKEEKSLIEEMKQISA-AI 211

Query: 129 MPDCTII 135
            P   I+
Sbjct: 212 KPHEVIL 218


>gi|322706958|gb|EFY98537.1| uridylate kinase [Metarhizium anisopliae ARSEF 23]
          Length = 308

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 38/215 (17%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  + L +      L      +   +E  G+   +  R  + +  +      
Sbjct: 119 GGPGAGKGTQCANLVKQYGFTHLSA-GDLLRAEQERPGSQFGDLIRDYIKNGLIVPMEV- 176

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                     +  +EN +  AL         RFL   +             LD   +   
Sbjct: 177 ---------TIQLLENAMTEALQSNGNATKGRFLIDGF----------PRKLDQAHKFE- 216

Query: 126 QEVMPD-CTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLD 179
           + V P    +  D P  +  +R+  R   S R     +   ++     E        +  
Sbjct: 217 ESVCPARMVLFFDCPEKVMEERLLERGKTSGRADDNAESIRKRFRTFIETSMPVVDYYEK 276

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            A+        +D+  +   V  N    + E   K
Sbjct: 277 QAK-----VVKIDATPTPDQVFANTKARLTEKFGK 306


>gi|403984|gb|AAB09751.1| deoxyguanosine kinase [Lactobacillus acidophilus]
          Length = 224

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 80/229 (34%), Gaps = 45/229 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++   +L ++L             G  P  E+     +L    +    +
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYE--NPK 48

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQE 122
             A +     L+     I+ AL +   +L DR +   +  +Q   D  +     +D+  E
Sbjct: 49  KYAFLLQVYFLNTRFRSIKSALTDDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYYE 107

Query: 123 ISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
           + +  +M          PD  + +D+  D  LKR+Q R    E    D   E      ++
Sbjct: 108 L-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DYYK 162

Query: 172 KRRQIFL-DIARNQPDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +  + +    A+        +D             Q V   I+  + E+
Sbjct: 163 RLLRYYKPWYAKYDYSPKMTIDGDKLDFMASEEDRQEVLNQIVAKLKEM 211


>gi|55379684|ref|YP_137534.1| signal recognition particle receptor [Haloarcula marismortui ATCC
           43049]
 gi|55232409|gb|AAV47828.1| signal recognition particle receptor [Haloarcula marismortui ATCC
           43049]
          Length = 429

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 17/155 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L ++ + +     +    G T  A A     L    +    + 
Sbjct: 236 IVFTGVNGVGKTTSIAKLAQYFEDRGLSTVLA--NGDTYRAGANEQ--LEKHAENLDKKI 291

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 +     V + +  A      ++L D            R  +    +  L++I  
Sbjct: 292 ITHEQGSDPTAVVYDAVEYAKANDIDVVLGD---------TAGRLHTSDDLMAQLEKID- 341

Query: 126 QEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158
           + + PD T+ +D  +     + R +      E   
Sbjct: 342 RNIDPDMTLFVDEAVAGQDAVNRAREFNDAAEIDG 376


>gi|42560928|ref|NP_975379.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|126031077|pdb|2JAQ|A Chain A, Structure Of Deoxyadenosine Kinase From M. Mycoides With
           Bound Dctp
 gi|126031078|pdb|2JAQ|B Chain B, Structure Of Deoxyadenosine Kinase From M. Mycoides With
           Bound Dctp
 gi|126031085|pdb|2JAT|A Chain A, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Products Dcmp And A Flexible Dcdp Bound
 gi|126031086|pdb|2JAT|B Chain B, Structure Of Deoxyadenosine Kinase From M.Mycoides With
           Products Dcmp And A Flexible Dcdp Bound
 gi|16040925|emb|CAC85213.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. mycoides SC]
 gi|42492425|emb|CAE77021.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320971|gb|ADK69614.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 205

 Score = 47.3 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 33/217 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T  + + + L  + +   V   P      +  +  +    +    A +
Sbjct: 3   IAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 62

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + +     +  ++EN+I    L+E  I     F+  +Y       +  + ++D    + +
Sbjct: 63  KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQTDYNTYIDFYNNVVL 113

Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + +  P      D  I L +     + R++ R    E               E   + + 
Sbjct: 114 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLI-------GEEYWETLNKNYE 166

Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +  +      P    +VD+      V T I  I+ +L
Sbjct: 167 EFYKQNVYDFP--FFVVDAELD---VKTQIELIMNKL 198


>gi|269120975|ref|YP_003309152.1| shikimate kinase [Sebaldella termitidis ATCC 33386]
 gi|268614853|gb|ACZ09221.1| Shikimate kinase [Sebaldella termitidis ATCC 33386]
          Length = 165

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 50/212 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I   G+  +GKTT   LL   L+ + YD  +  E          + +    G D
Sbjct: 1   MKN---IVLIGMPASGKTTISELLAEKLEMEKYDADIYLE---EMEGRLIKDIFSEFGED 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    E                     +  I++            G     +   +++L
Sbjct: 55  YFRDLEE-------------KYTNELSEKNNIIIST----------GGGVIKREKNIENL 91

Query: 121 QEISVQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++     +     I LD    +I  +    R  L+++A ++         H    + + D
Sbjct: 92  KK---NGI----VIFLDRDPSEIAKEDHALRPLLQDTANIERL--YGERYH--LYEGYAD 140

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                    +IV +  S + V   I+ I+ E+
Sbjct: 141 ---------YIVKNNSSLEEVIETIIKIINEV 163


>gi|217960008|ref|YP_002338564.1| hypothetical protein BCAH187_A2612 [Bacillus cereus AH187]
 gi|229139200|ref|ZP_04267775.1| uridine kinase [Bacillus cereus BDRD-ST26]
 gi|217068310|gb|ACJ82560.1| hypothetical protein BCAH187_A2612 [Bacillus cereus AH187]
 gi|228644259|gb|EEL00516.1| uridine kinase [Bacillus cereus BDRD-ST26]
          Length = 187

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 2   MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDSYN 42

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A+   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 43  FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IIVDYPFAY 92

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 93  LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNDLKHYITY 141

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 142 ARKGYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180


>gi|209735056|gb|ACI68397.1| Deoxycytidine kinase [Salmo salar]
          Length = 293

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 30/192 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---- 53
           M+    IS EG   AGK+T + LL+   Q K+++V    + R             +    
Sbjct: 18  MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNAQTQHSEFEELTVSQ 75

Query: 54  -----LLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRF 98
                +L    ++    A      A     R        +    E  +      +  DR+
Sbjct: 76  KNGGNVLQMMYEKPERWAYTFQTYAFMSRVRAQMKSTNGKLREAENPVQFFERSVYSDRY 135

Query: 99  LDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           + ++  Y+ E  +     +       L E   + +  D  I L    +  ++R+  R   
Sbjct: 136 IFAANLYESECLNETEWSIYQDWHGWLHEQFGKHIELDGIIYLRAAPERCMERLHRRGRE 195

Query: 154 RESA-CLDYFER 164
            E    L+Y E+
Sbjct: 196 EEQGIPLEYLEK 207


>gi|18978138|ref|NP_579495.1| signal recognition particle receptor [Pyrococcus furiosus DSM 3638]
 gi|18893939|gb|AAL81890.1| signal recognition particle receptor (dpa) [Pyrococcus furiosus DSM
           3638]
          Length = 322

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 18/132 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+   G  G+GKTT I+ L  +L+   + V +      T  A A     L       G 
Sbjct: 127 MFV---GFNGSGKTTTIAKLANWLKNHGFSVVIAA--SDTFRAGAIEQ--LEEHAKRIGV 179

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     + A       + I+ A   G  ++L D            R  +    +D +++I
Sbjct: 180 KVIKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKI 230

Query: 124 SVQEVMPDCTII 135
           + +   P+  I 
Sbjct: 231 A-RVTKPNLVIF 241


>gi|330792871|ref|XP_003284510.1| hypothetical protein DICPUDRAFT_27799 [Dictyostelium purpureum]
 gi|325085540|gb|EGC38945.1| hypothetical protein DICPUDRAFT_27799 [Dictyostelium purpureum]
          Length = 211

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 72/231 (31%), Gaps = 59/231 (25%)

Query: 5   LFIS---FEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGT-----------PAA 47
             I+    EG  G+GKT     L ++  +  + V        P  +             +
Sbjct: 9   KMITVLCLEGCHGSGKT----ELCKYFSKAGFTVLDEAFLDMPSYSIPNQTLTMETVWVS 64

Query: 48  EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-Q 106
              + +L    ++      +          H+      +    K+L+ DR   S+  Y Q
Sbjct: 65  NWFQRLLKMEQIENSQQSQQN-------NQHLNGNFNNSY--HKVLIADRSPYSAILYSQ 115

Query: 107 GERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                   +  + ++E+    ++       TI L +  +    R+Q R   RE     Y 
Sbjct: 116 NNGHYLDPIISEQIKELKKYTNIDI----KTIYLKVDKNTLWNRIQERLE-REPERKKYN 170

Query: 163 E------RKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILN 206
           E         V  +E R   +            ++D S+ S   +   I N
Sbjct: 171 EDNYQWMNDTVNFYESRNWDY------------VIDNSSLSSDKIFNQITN 209


>gi|300215217|gb|ADJ79633.1| Deoxyguanosine kinase [Lactobacillus salivarius CECT 5713]
          Length = 245

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 39/234 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60
           I+  GI G+GK++   +L + L  K Y      +  +     G   A   R        +
Sbjct: 2   ITLSGIIGSGKSSLTEILAKELGTKAYYEPVKDNPVLPIFYKGNEIAAKKRA---EGDKE 58

Query: 61  EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------SSY--AYQGE 108
                A  +  F   R   +   I+ A+ +   +L DR +          +    A Q E
Sbjct: 59  ATNPYAYLLQTFFLNRRFAM---IKKAMQDDNNIL-DRSIYEDEIFMRMNTEMGNATQVE 114

Query: 109 RDSSQHLFLDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            D  + L  + ++E  ++  +  PD  I + +  +  +KR++ R    E    D      
Sbjct: 115 YDIYKSLLHNMMEELPLASHKKSPDLMITIKVSYETMIKRIEKRGRDYELIEKDP---SL 171

Query: 167 VMIHEKRRQIFLDIARNQPDR-CHIVDSAH-----SFQ---SVATNILNIVWEL 211
           V  +++  + +    +        I+D        S +    V   + N + EL
Sbjct: 172 VDYYQRLLKHYDIWMKEYDASPLLIIDGDKYDFMESKEDRVQVLETVENKLLEL 225


>gi|296116712|ref|ZP_06835322.1| adenylate kinase [Gluconacetobacter hansenii ATCC 23769]
 gi|295976924|gb|EFG83692.1| adenylate kinase [Gluconacetobacter hansenii ATCC 23769]
          Length = 219

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 53/239 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I F G  GAGK T   LL+      Q    D+        +P  +  + V+ S    +  
Sbjct: 3   IIFLGPPGAGKGTQSKLLEAHYGIAQISTGDMLRAEVAADSPLGKKVKSVMASG---QLV 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   I    AR+D      RP    G   + D F          R  +Q   LDS+ + 
Sbjct: 60  PDDLIIALIEARID------RPDCARGF--ILDGF---------PRTRAQAEALDSMLKK 102

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFER----------KDVMIHE 171
           + + +  D  ++LD+  D    R+  R++  +      D ++R                 
Sbjct: 103 TGRHI--DLVLLLDVDEDALADRIAGRFTCAKCGEGYNDLYKRPRVEGTCDVCGGHDFVR 160

Query: 172 K---RRQIFLDIARNQPD-------------RCHIVDSAHSFQSVATNILNIVWELVQK 214
           +   RR+      +   +             R   +D       V   +   V  + +K
Sbjct: 161 REDDRRETVAARLKAYREQTAPILPYYEGHGRLCRIDGMADIDDVTKQVFAAVDGITKK 219


>gi|257052404|ref|YP_003130237.1| signal recognition particle-docking protein FtsY [Halorhabdus
           utahensis DSM 12940]
 gi|256691167|gb|ACV11504.1| signal recognition particle-docking protein FtsY [Halorhabdus
           utahensis DSM 12940]
          Length = 394

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 29/139 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L ++L+ + +   +    G T  A             + G  A
Sbjct: 200 IVFTGVNGVGKTTTIAKLAQYLEDRGHSSVLA--NGDTYRA---------GANQQLGEHA 248

Query: 67  EAIVFAAARLDH-------VENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD 118
           EA+       +        + + +  A      ++L D            R  +    +D
Sbjct: 249 EALDVPYISHEQGGDPTAVIYDAVEYAEANDVDVVLGD---------TAGRLHTSEGLMD 299

Query: 119 SLQEISVQEVMPDCTIILD 137
            L +I  + + PD T+ +D
Sbjct: 300 QLSKIE-RIIEPDMTLFVD 317


>gi|126656131|ref|ZP_01727515.1| Carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp.
           CCY0110]
 gi|126622411|gb|EAZ93117.1| Carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp.
           CCY0110]
          Length = 169

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 67/196 (34%), Gaps = 45/196 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT    L + L    YD      P      +    +     +D+       + 
Sbjct: 7   GVSGSGKTTIGKALSQELGYAFYDADDFHPP------KNIAKMSQGIPLDDSDRLPWLLA 60

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                 +H +        +  ++ C               + +  + D L++ +   +  
Sbjct: 61  IKLVIDEHQKE------QKNAVITC--------------SALKQSYRDLLEKNTTNIIW- 99

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
              I L    +  LKR+Q R         D+F +++++I +     F  +   +P+    
Sbjct: 100 ---IYLKGSYETFLKRLQQR--------PDHFMKENMLISQ-----FEAL--EEPENAVT 141

Query: 191 VDSAHSFQSVATNILN 206
           +D   S   +   I+N
Sbjct: 142 IDVNLSVAEIVQEIIN 157


>gi|291231252|ref|XP_002735582.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 483

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 66/231 (28%), Gaps = 46/231 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--VDEFGA 64
           I   G  G+GK T  +LL      K + V            +  +  + +     +    
Sbjct: 271 IVILGPTGSGKKTQAALLA----SKYHCV-------SVSTGQLVKEAIANESKMGEALKP 319

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +          N+I   L        DR        +G          +  + + 
Sbjct: 320 YVERDMMIPD------NLILNLLK-------DRLCQIDCVSRGWVLRGFPTTREQAENLC 366

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYFERKDVMIH 170
                P+ T  LD+P D  ++R+  R +               R     D   +      
Sbjct: 367 SAGFEPNRTFFLDVPNDSVIERLVLRTTDPITGERYHELYNPPRTQEIKDRCRQHVKDTE 426

Query: 171 EKR------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           E+        Q +     +  +    V++     +V   + +++   + KR
Sbjct: 427 EEVKKRLASYQAYASEIADFYESAQHVNADQDPHTVFECLESMLVNPLPKR 477


>gi|171920640|ref|ZP_02931880.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185178869|ref|ZP_02964642.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024352|ref|ZP_02997023.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518707|ref|ZP_03004132.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188524140|ref|ZP_03004212.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867437|ref|ZP_03079441.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273416|ref|ZP_03205952.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554313|ref|YP_002284511.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550652|ref|ZP_03771601.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551302|ref|ZP_03772248.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903366|gb|EDT49655.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209506|gb|EDU06549.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018618|gb|EDU56658.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997698|gb|EDU66795.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660069|gb|EDX53449.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660913|gb|EDX54166.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249936|gb|EDY74716.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541814|gb|ACI60043.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379117|gb|EEH01482.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379806|gb|EEH02168.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 232

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 29/224 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I+F      GK+T    L    Q  N  V+   E       +    +LL+   +  
Sbjct: 25  GGM-IAF------GKSTLAQALHEKYQPSNV-VYEMVE------GDKLMDLLLAKMYERE 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL 120
                  +F    + +     +       + + DR  F D  +A+      S   + D L
Sbjct: 71  NNVLFGSLFQLYFVLNRFANYKNNCNRENLTIFDRSIFEDWLFAHANIDKPSVFSYYDGL 130

Query: 121 QEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +   +E+     +P   +ILD   ++  +R+  R    E       E       ++  +
Sbjct: 131 WQGVCKELIYEHGVPKLYVILDGDWELFKERIFKRNRKVEIDNFSINE----TYFKRLLE 186

Query: 176 IFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++ +    + ++      ++D+ +S +     +   + EL  ++
Sbjct: 187 MYKNYMVNVCKDFGIDYIVLDARNSVEHNVNEVTKRLQELKNEQ 230


>gi|242063246|ref|XP_002452912.1| hypothetical protein SORBIDRAFT_04g034900 [Sorghum bicolor]
 gi|241932743|gb|EES05888.1| hypothetical protein SORBIDRAFT_04g034900 [Sorghum bicolor]
          Length = 213

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 71/233 (30%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 33  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 72

Query: 71  FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114
                      +I   + EGKI+                  D+FL   +     R+    
Sbjct: 73  ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKNENDKFLIDGF----PRNEENR 118

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
              +++ +IS     P   +  D   +   +R+  R   R    ++  +++     E   
Sbjct: 119 AAFENVTKIS-----PAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIKKRFKTFVESSL 173

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
              + +        D+   +D+A     V  ++  I         +P SSK +
Sbjct: 174 PVIEHYNSR-----DKVKKIDAAKPIPEVFEDVKAI--------FAPFSSKAE 213


>gi|300702345|ref|XP_002995177.1| hypothetical protein NCER_102036 [Nosema ceranae BRL01]
 gi|239604052|gb|EEQ81506.1| hypothetical protein NCER_102036 [Nosema ceranae BRL01]
          Length = 179

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 45/212 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G GK T    L +     N+    T +       +  + +L +        
Sbjct: 4   LIIV--GPPGCGKGTISKKLAKDF---NFKHVSTGDLLRNTGDKNVQEILKNGN------ 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                 F +   + +  +I   L+     + D F          R   Q  +L+  ++ +
Sbjct: 53  ------FVSD--ECITQLIEEELLNNS-CILDGF---------PRTLVQAEYLEKCKDKN 94

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180
           +        ++++      ++R+QNR   RE    D     DV +  +R +I+      +
Sbjct: 95  INIS---LVLLINTSEKECIRRIQNREDQRED---DR----DVEVIRRRLKIYHMCTEPL 144

Query: 181 ARNQPDR--CHIVDSAHSFQSVATNILNIVWE 210
                +R     V+   +   V  ++L I+  
Sbjct: 145 IEFYKERNLLVTVNGNKTKDEVYNDVLEILKR 176


>gi|197303017|ref|ZP_03168065.1| hypothetical protein RUMLAC_01744 [Ruminococcus lactaris ATCC
           29176]
 gi|197297872|gb|EDY32424.1| hypothetical protein RUMLAC_01744 [Ruminococcus lactaris ATCC
           29176]
          Length = 211

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 46/216 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59
             G+ I   G  G+GK T +  L +             TR+P            +     
Sbjct: 3   KKGILIVVSGFSGSGKGTLMKALMKKYPENYALSISATTRQPREGETDGKEYFFISKEEF 62

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++  A +E I +A    ++     + +   L  GK ++ +         QG         
Sbjct: 63  EKMIANSELIEYAKYVENYYGTPRDYVERQLESGKDVILE------IEIQGA-------- 108

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                 + V++  PD T++L +      + +++R   R +  LD  E +           
Sbjct: 109 ------LKVKKAFPD-TLLLFITPPTAQE-LRSRLVGRGTETLDVIESR----------- 149

Query: 177 FLDIARNQPDR-----CHIVDSAHS--FQSVATNIL 205
            +D A  + +        IV+       + V   I 
Sbjct: 150 -MDRACEEAEGMDQYDYLIVNDDLDTCVEEVHQIIR 184


>gi|73977763|ref|XP_852849.1| PREDICTED: similar to UMP-CMP kinase (Cytidylate kinase)
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase) [Canis familiaris]
          Length = 196

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 26/150 (17%)

Query: 78  HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125
               +I   + +GKI+       L  R +D + A   Q  +          D+LQ  +  
Sbjct: 48  QYGELIEKYIKDGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKT 107

Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
            +   D    +  D   +I ++R   R      +  +    + +   EKR Q +L   + 
Sbjct: 108 MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKP 161

Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207
                 +  +   +D++ S   V   ++ I
Sbjct: 162 IIDLYEEMGKVKKIDASKSVDEVFDEVVKI 191


>gi|15790659|ref|NP_280483.1| adenylate kinase [Halobacterium sp. NRC-1]
 gi|169236398|ref|YP_001689598.1| adenylate kinase [Halobacterium salinarum R1]
 gi|13628430|sp|Q9HPA7|KAD_HALSA RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|229487585|sp|B0R683|KAD_HALS3 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|10581188|gb|AAG19963.1| adenylate kinase [Halobacterium sp. NRC-1]
 gi|167727464|emb|CAP14252.1| adenylate kinase [Halobacterium salinarum R1]
          Length = 216

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 76/232 (32%), Gaps = 60/232 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69
           G  GAGK T    L         +   T   G    A   + +  L    D  GA  +A 
Sbjct: 10  GAPGAGKGTQSRRLVDEF---GVEHVTT---GDALRANKTKDITHLDVEYDTPGAYMDAG 63

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 +  V  +++ AL +      D ++   Y     R+ SQ  +LDS+ ++      
Sbjct: 64  ELVPDAV--VNEIVKTALDD-----ADGYVLDGY----PRNESQTEYLDSITDL------ 106

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDV------MIHEKRRQIFL 178
            D  + LD+  D  + R+  R    +         +  E + V       ++++      
Sbjct: 107 -DVVLYLDVDEDELVGRLTGRRVCEDCGATFHVSFNQPETEGVCDACGGSLYQREDDT-E 164

Query: 179 DIARNQPDRCHI--------------------VDSAHSFQSVATNILNIVWE 210
           + AR   +R  +                    VD   +   V T++   V E
Sbjct: 165 ETAR---ERITVYEENTAPVVEYFREQGVLAEVDGERTPDEVWTDVAAAVDE 213


>gi|256820357|ref|YP_003141636.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase
           [Capnocytophaga ochracea DSM 7271]
 gi|315223485|ref|ZP_07865341.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Capnocytophaga
           ochracea F0287]
 gi|256581940|gb|ACU93075.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase
           [Capnocytophaga ochracea DSM 7271]
 gi|314946520|gb|EFS98512.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Capnocytophaga
           ochracea F0287]
          Length = 375

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 21/183 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG  G+GKTT  + +      K      +  P      E  +         E   
Sbjct: 179 KYIAIEGNIGSGKTTLATKIAEDFNAKLILEQFSDNPFLPKFYENPKQY---GFTLEMSF 235

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122
             E       R   +   +    +  + ++ D  +  S  +     +     L       
Sbjct: 236 LTE-------RYQQMCEQLAQMDLFKEFVVSDYDIFKSLIFSKVTLTDDEFVLYRKLFYI 288

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181
           +  Q + PD  + L    D  ++ ++ R    E     DY         +K    +LD  
Sbjct: 289 LYSQIIKPDLYVFLYQNTDRLIENIKKRGRTYEQNISPDYL--------KKIHYGYLDFI 340

Query: 182 RNQ 184
           +  
Sbjct: 341 QKN 343


>gi|199597539|ref|ZP_03210968.1| Deoxynucleoside kinase [Lactobacillus rhamnosus HN001]
 gi|258508217|ref|YP_003170968.1| deoxynucleoside kinase [Lactobacillus rhamnosus GG]
 gi|199591562|gb|EDY99639.1| Deoxynucleoside kinase [Lactobacillus rhamnosus HN001]
 gi|257148144|emb|CAR87117.1| Deoxynucleoside kinase [Lactobacillus rhamnosus GG]
 gi|259649533|dbj|BAI41695.1| deoxynucleoside kinase [Lactobacillus rhamnosus GG]
          Length = 242

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 36/230 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA-IVFA 72
           GAGKT+   +L   ++      +     G    A   +    +         A   I F 
Sbjct: 9   GAGKTSLTKVLSADMEA---PAYYEDVEGNGMIANMLQKFYGAGADSRKRTGAMLQIAFL 65

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLDSLQEISVQ 126
             R   ++  +          + D  L+S +         GE D   +    +L +    
Sbjct: 66  TFRYQQLKKAVTQENA-----IMDSSLESDFVMASQLHKHGEIDDIDYNVYVTLSQEMQS 120

Query: 127 EV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            V       +PD  + L +  D  L  +Q+R    E       + + V  + +    + D
Sbjct: 121 NVNGSPWNGLPDLAVYLKIDPDHELDEIQSRGRDMEDI---RQKPELVAYYRRVNAAYQD 177

Query: 180 IARNQ-PDRCHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220
            A+         +D        SA    +V   I + + +L   ++SP +
Sbjct: 178 WAKGYTRSSMITIDRDRYDFMHSAADRATVLDQIESKLVDL--GKLSPQT 225


>gi|104774798|ref|YP_619778.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|103423879|emb|CAI98920.1| Deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 220

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 58/173 (33%), Gaps = 43/173 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L + L       +   E    P        +L     +     
Sbjct: 10  IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 57

Query: 67  EAIV--FAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGER 109
             +   F   RL+     I  A      +L DR            +D+  A    YQ   
Sbjct: 58  FLLNTYFLNKRLE----EINAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY- 111

Query: 110 DSSQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
               H  +D++ E         PD  I + + +D  LKR+  R   RE   LD
Sbjct: 112 ----HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRG--REFEQLD 158


>gi|260590786|ref|ZP_05856244.1| deoxynucleoside kinase family protein [Prevotella veroralis F0319]
 gi|260537272|gb|EEX19889.1| deoxynucleoside kinase family protein [Prevotella veroralis F0319]
          Length = 204

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 66/195 (33%), Gaps = 30/195 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT  ++L    +R  +              +  +++        +    
Sbjct: 3   IAIAGNIGSGKTTLTTMLA---KRYGWKPRFESVDYNPYLEDYYKNI------KRWSFAM 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118
           E         D +E         G+ ++ DR +         ++YA     D     +++
Sbjct: 54  EVFFLKERFRDLLE-----ISRSGESVVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
             ++++     PD  I L   V   +  ++ R    E    LDY E        KR   F
Sbjct: 109 LFEDMTDAVKFPDLMIYLRSSVSHLVSNIEKRGREYEQKMPLDYLEN-----LNKRYDDF 163

Query: 178 LDIARNQPDRCHIVD 192
             I+     R  +VD
Sbjct: 164 --ISDKYKGRVLVVD 176


>gi|115449031|ref|NP_001048295.1| Os02g0778400 [Oryza sativa Japonica Group]
 gi|47497455|dbj|BAD19510.1| putative UMP/CMP kinase a [Oryza sativa Japonica Group]
 gi|113537826|dbj|BAF10209.1| Os02g0778400 [Oryza sativa Japonica Group]
          Length = 214

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 47/208 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 34  GGPGSGKGTQCANIVEHF---GF--------IHLSAGDLLRAEIKSGSENG--------- 73

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125
                      +I   + EGKI+  +            +  +    +D          + 
Sbjct: 74  ----------TMIENMIKEGKIVPSE-VTIKLLQEAMIKSGNDKFLIDGFPRNEENRAAF 122

Query: 126 QE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179
           +    + P   +  D   +   +R+  R   R    ++   ++  +  E      + +  
Sbjct: 123 ENVTKITPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYY-- 180

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207
              N  D+   +D+A     V  ++  I
Sbjct: 181 ---NAKDKVKKIDAAKPIPEVFEDVKAI 205


>gi|32474629|ref|NP_867623.1| guanylate kinase [Rhodopirellula baltica SH 1]
 gi|45477095|sp|Q7UP92|KGUA_RHOBA RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|32445168|emb|CAD75170.1| guanylate kinase [Rhodopirellula baltica SH 1]
 gi|327540688|gb|EGF27260.1| guanylate kinase [Rhodopirellula baltica WH47]
          Length = 209

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 49/229 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVL 54
           + G  +   G  GAGK+T +  L +       DV         TREP            L
Sbjct: 14  HPGRLVIISGPSGAGKSTVVKQLMKRC-----DVPLQLSVSATTREPRPGEIHGQDYFFL 68

Query: 55  LSCGVD---EFGAEAEA-IVFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
                +   +     E   VF+  +    +++ +   L  GK ++ +         QG  
Sbjct: 69  SHEEFERRRKLNDFVECKQVFSMGQWYGTLKDQVATGLNAGKWVILE------IDVQGAM 122

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                     +        M           +   +R++NR +  ES+     E     +
Sbjct: 123 AVLDDPHYRPVTIFVHPGSM-----------EELERRLRNRGTESESSLTARLETAAAEM 171

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
               R  +  I               S  +  T I  I+ +  Q++ +P
Sbjct: 172 QCLSRYQYEII-------------NESVDNAVTEICQILLD--QRKTTP 205


>gi|324326525|gb|ADY21785.1| hypothetical protein YBT020_12735 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 186

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 41/215 (19%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           MN     I+   + G GKTT    L   L   +   +D +   +       +        
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLINSKALYFDSYH-FDNCPADICKWI------ 53

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D    +   +      + H+   IR + ++  I+      D  +AY           
Sbjct: 54  --DDGANYDEWVLTPLIKDIQHL---IRDSKVDYIIV------DYPFAY----------- 91

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              L     Q +  D TI +D P+DI + R   R    E+    + + K  + +   R+ 
Sbjct: 92  ---LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEMHNDLKHYITYA--RKG 144

Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
           +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 145 YLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 179


>gi|320165340|gb|EFW42239.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 380

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 5/103 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   AGKTT +S+L  F +R+ + V+   E      +       L   +     + 
Sbjct: 7   IVLTGGPCAGKTTVLSVLSEFFERRGWKVYRVPEAATVLLSGGVSFAELDARMAA-QFQN 65

Query: 67  EAIVFAAARLDHVENVIRPALMEG----KILLCDRFLDSSYAY 105
             +       D   ++ R A+  G    ++L+CDR    + AY
Sbjct: 66  NLLNVMLRLEDTYHDLARGAIAAGATQSQVLICDRGAMDASAY 108


>gi|294506963|ref|YP_003571021.1| deoxynucleoside kinase [Salinibacter ruber M8]
 gi|294343291|emb|CBH24069.1| Deoxynucleoside kinase [Salinibacter ruber M8]
          Length = 217

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 15/155 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  GAG TT   LL    +     V    E    P  E           + +  +
Sbjct: 12  YVAIEGAIGAGTTTLTELLADRFEAD--PVLERFE--DNPFLERFYE-----DRERWAFQ 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
            + + F A+R    + +    L     +  D +    D  +A Q        L+    + 
Sbjct: 63  TQ-LAFLASRFRQQKELSERDLFRDFAV-SD-YTFDKDRIFARQTLSGDELQLYESLFRL 119

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +      PD  + L    +  L+ ++ R    E  
Sbjct: 120 MEPTVPSPDLVVYLRSSPERLLQNIEKRDRPYERD 154


>gi|153006648|ref|YP_001380973.1| deoxynucleoside kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152030221|gb|ABS27989.1| deoxynucleoside kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 215

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 52/168 (30%), Gaps = 31/168 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    +I+ EG  G GKT     L   L  +    H    P         R         
Sbjct: 1   MERPRYIAVEGPIGVGKTALAQALAERLGARLVLEHAEENPFLASFYGDRRK-------- 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119
              A    + F  +R    + + +  L          F  S+ A Y   +D        S
Sbjct: 53  --HAFQAQLFFLLSRFQQQQALFQQDL----------FTQSTIADYLFAKDRIFAALTLS 100

Query: 120 LQEISVQE----------VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
             E+++ +          V PD  + L    D+ L RV+ R    E +
Sbjct: 101 ADELALYDRVYELLGPRTVKPDLVVYLQARADVLLSRVRRRGRDFERS 148


>gi|330798489|ref|XP_003287285.1| hypothetical protein DICPUDRAFT_151373 [Dictyostelium purpureum]
 gi|325082745|gb|EGC36218.1| hypothetical protein DICPUDRAFT_151373 [Dictyostelium purpureum]
          Length = 196

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 63/208 (30%), Gaps = 43/208 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK T  + +        L     D+       G+   +    ++ +  +      
Sbjct: 15  GGPGSGKGTQCANIVEEFGFVHLSAG--DLLRAEMNSGSKNGDMIATMIKNGEIVPSIVT 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E +          +N I+     GK  L D F           + +   + D++++I  
Sbjct: 73  IELL----------KNAIKS--NPGKNFLVDGF--------PRNEENNKSWEDNMKDIVD 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH------EKRRQIFLD 179
            +      +  D P ++  +R+  R         D  E      H      +     +  
Sbjct: 113 TKF----VLYFDCPEEVMTERLLKRGES-SGRSDDNMESIRKRFHTFNVQTKLVIDYY-- 165

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207
               Q D+   +D+      V  ++  +
Sbjct: 166 ---GQFDKVRRIDANRDVSLVYKDVQAL 190


>gi|255539731|ref|XP_002510930.1| uridylate kinase plant, putative [Ricinus communis]
 gi|223550045|gb|EEF51532.1| uridylate kinase plant, putative [Ricinus communis]
          Length = 298

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 37/201 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    + +      +            A +  R  +LS   D        I+
Sbjct: 119 GGPGSGKGTQCLKIAKTF---GFK--------HLSAGDLLRREILSNSDDG-----AMIL 162

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV-- 128
                   V + +   L++ ++ L D   +S +   G   + +         I+ + +  
Sbjct: 163 NTIKEGRIVPSEVTVKLIKKEMELSD---NSKFLIDGFPRTEE-------NRIAFEHIIG 212

Query: 129 -MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ---IFLDIARNQ 184
             P+  +  D P +  +KRV NR   R    +D   +K + +          +     ++
Sbjct: 213 AEPNIVLFFDCPQEEMVKRVLNRNEGRVDDNIDTI-KKRLEVFSALNLPVIGYY----SK 267

Query: 185 PDRCHIVDSAHSFQSVATNIL 205
             + H +++  +   +   + 
Sbjct: 268 KGKLHTINAVGTVDEIFEQVR 288


>gi|303275942|ref|XP_003057265.1| cytoplasmic dynein heavy chain 1b [Micromonas pusilla CCMP1545]
 gi|226461617|gb|EEH58910.1| cytoplasmic dynein heavy chain 1b [Micromonas pusilla CCMP1545]
          Length = 4425

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 30/123 (24%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GK+T   +L+   ++    V      P         R  LL  G  + 
Sbjct: 2136 GIIIV--GPSGSGKSTLWQILEGAYKKLGRPVKRHVMNPKAIH-----RQQLL--GHMDM 2186

Query: 63   GAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                    ++  AAR      V++ +L +   ++CD                   +++SL
Sbjct: 2187 DTREWFDGVLTDAAR-----QVVKESLDQHSWIICD-------------GDVDPEWIESL 2228

Query: 121  QEI 123
              +
Sbjct: 2229 NSV 2231


>gi|126305744|ref|XP_001374841.1| PREDICTED: similar to Cytidylate kinase [Monodelphis domestica]
          Length = 246

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 68/218 (31%), Gaps = 57/218 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + + +               G T  +     +L +          E   
Sbjct: 60  GGPGAGKGTQCTRIVQK-------------YGYTHLSAG--DLLRNERNKPDSQYGEL-- 102

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSY---AYQGERDSSQHLFL--D 118
                       I   + EG+I+       L  R +D +    A Q  +          D
Sbjct: 103 ------------IEKYIREGEIVPVEITISLLKREMDKTMEANA-QKNKFLIDGFPRNQD 149

Query: 119 SLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +LQ  +   +   D    +  D   +I ++R   R      +  +  E        KR Q
Sbjct: 150 NLQGWNKTMDGKADVSFILFFDCDNEICIERCLERGKSSGRSDDNR-ESLG-----KRIQ 203

Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
            +L   +       +  +   VD++ S + V  ++L I
Sbjct: 204 TYLQCTKPIIDLYEEMGKVRKVDASKSVEEVFGDVLKI 241


>gi|195127427|ref|XP_002008170.1| GI11969 [Drosophila mojavensis]
 gi|193919779|gb|EDW18646.1| GI11969 [Drosophila mojavensis]
          Length = 225

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 68/213 (31%), Gaps = 38/213 (17%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G GK T  + +        L     D+       G+      + +++S         
Sbjct: 36  GGPGCGKGTQCAKIVEKYGFTHLSSG--DLLRDEVASGSDKGRELQELMVSGA---LVPN 90

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           AE +    A +   +   +  L++G                      ++  ++   +I+ 
Sbjct: 91  AEVLSLLNAAITRAKGASKGFLIDGY------------------PREKNQGIEFEAQIAP 132

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEKRRQIFLDIAR 182
                D  I  D   +  LKR+  R +       D  E   R  +   ++      DI  
Sbjct: 133 A----DLAIYFDCSEETMLKRILARAAAATVKRADDNEATIRSRLQTFKRNTS---DILA 185

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              ++   +++    + +   ++  +  ++QK+
Sbjct: 186 LYEEKTLTINAERDVEDIFMEVVEAIDCVLQKK 218


>gi|3913952|sp|O24464|KAD_PRUAR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|2351578|gb|AAB68604.1| adenylate kinase homolog [Prunus armeniaca]
          Length = 231

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 68/227 (29%), Gaps = 66/227 (29%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F++F  G  G+GK T  + +        +            A +  R  + S        
Sbjct: 48  FVTFVLGGPGSGKGTQCAKIVEAF---GF--------THVSAGDLLRREIASGSA----- 91

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL--------L------CDRFLDSSYAYQGERD 110
                           +VI   + EGKI+        +       D     +Y +  +  
Sbjct: 92  --------------YGSVILSTIREGKIVPSQVTVELIQKEMESSD-----NYKFLIDGF 132

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                   + ++       PD  +  D P    +KRV NR   R    +D          
Sbjct: 133 PRSEENRKAFEQ--TIGAEPDVVLFFDCPEQEMVKRVLNRNQGRVDDNIDTI-------- 182

Query: 171 EKRRQIFLDI----ARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211
           +KR +IF ++          R   H +++  +   +   +  I   L
Sbjct: 183 KKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKVRPIFAPL 229


>gi|113195351|ref|YP_717481.1| thymidylate kinase [Taterapox virus]
 gi|90660627|gb|ABD97740.1| thymidylate kinase [Taterapox virus]
          Length = 58

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          M+ G  I FEG++ +GKTT    +   +      +     P  +          L+   
Sbjct: 1  MSRGALIVFEGLDKSGKTTQCMNIMESISAN--TIKYLNFPQRSTVTGKMIDDYLTRKN 57


>gi|300362720|ref|ZP_07058895.1| deoxyguanosine kinase [Lactobacillus gasseri JV-V03]
 gi|300353148|gb|EFJ69021.1| deoxyguanosine kinase [Lactobacillus gasseri JV-V03]
          Length = 224

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++   +L ++L             G  P  E+     +L    +     
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120
           A  +   F   R       I+ AL +   +L DR +   +  +Q   D  +     +D+ 
Sbjct: 51  AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATKEEVDTY 105

Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169
            E+ +  +M          PD  + +D+  D  LKR+Q R    E    D   E      
Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160

Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +++  + +          P     +D             Q V   I+  + E+
Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKFDFMASEEDRQEVLNQIVAKLKEM 211


>gi|154249911|ref|YP_001410736.1| cytidylate kinase [Fervidobacterium nodosum Rt17-B1]
 gi|171769431|sp|A7HME6|KCY_FERNB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|154153847|gb|ABS61079.1| cytidylate kinase [Fervidobacterium nodosum Rt17-B1]
          Length = 219

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 86/234 (36%), Gaps = 54/234 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAE 65
           I+ +G  G+GKTT   L+ + L     D         T A      + L   GV+     
Sbjct: 5   IAIDGPAGSGKTTVAKLIAQKL---GIDYL------DTGAMYRIVGLYLHSIGVEPKSTS 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCD--RFLDSSY-AYQGERDSSQHLFLDSLQE 122
            + I+        +E + +   + GK +  D  R  ++   A Q   +     FL  +Q+
Sbjct: 56  IKDILEKVN----IEYIGKDYYLNGKKV-GDEIRTPEAGMFASQYAANPEVREFLTKIQK 110

Query: 123 -------ISVQE------VMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  I  +       VMPD T  I L    ++   R + RY   +S  ++      V
Sbjct: 111 QICSNRSIVAEGRDIGTVVMPDATVKIFLVASPEV---RARRRYEELKSKNME------V 161

Query: 168 MIHEKRRQIFLDIARNQPDR----------CHIVD-SAHSFQSVATNILNIVWE 210
              E  RQI  +  +N  +R             +D S  S + V   IL+IV E
Sbjct: 162 SYEELLRQI-EERDKNDSNRDVAPLVKAPDAIEIDTSNLSIEEVVEKILDIVKE 214


>gi|89273798|emb|CAJ82118.1| cytidylate kinase [Xenopus (Silurana) tropicalis]
          Length = 232

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 65/223 (29%), Gaps = 56/223 (25%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F+ F  G  GAGK T    + +                   A +  R             
Sbjct: 40  FVVFVLGGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----- 83

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117
                            +I   + +G+I+       L  R ++ + A  G +        
Sbjct: 84  -------------QYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGF 130

Query: 118 ----DSLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
               D+LQ          D    +  D   +  ++R   R      +  +    + +   
Sbjct: 131 PRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL--- 184

Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           EKR Q +L   R       +  +   VD++ S   V T + +I
Sbjct: 185 EKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDI 227


>gi|196040426|ref|ZP_03107727.1| hypothetical protein BC059799_2511 [Bacillus cereus NVH0597-99]
 gi|196028911|gb|EDX67517.1| hypothetical protein BC059799_2511 [Bacillus cereus NVH0597-99]
          Length = 186

 Score = 46.9 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLINS-------------------KALYFDSYH 41

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A+   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 42  FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IIVDYPFAY 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         DY E     IH         
Sbjct: 92  LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DYKEDTMSEIHNDLKHYITY 140

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D + S   +   I   ++ 
Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGSLSVDEIINQIEEELYR 179


>gi|115376116|ref|ZP_01463361.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115366931|gb|EAU65921.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 225

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 58/185 (31%), Gaps = 29/185 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
              FI+  G  GAGKT   S L R      YD+    EP             L+    + 
Sbjct: 24  RKKFIAVAGNIGAGKTELTSFLCRK-----YDLTPYFEPNDQNP-------YLAPFYKDM 71

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHL 115
             +  A       L H   + R        +L DR  + D+     +   Q   D     
Sbjct: 72  --KTWAFRSQIFFLTHKFRLHRELERHSGTVLQDRTIYEDAEIFAKNLHRQRFIDRRDWQ 129

Query: 116 FLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
               L E   Q +  PD  I L  PV    +R++ R    E           V   ++  
Sbjct: 130 TYRELYETIAQALSPPDLMIYLRCPVQTLRERIRLRGRSMEKDIP-------VAYLKRLN 182

Query: 175 QIFLD 179
            ++ +
Sbjct: 183 ALYEE 187


>gi|76800746|ref|YP_325754.1| signal recognition particle receptor SRalpha [Natronomonas
           pharaonis DSM 2160]
 gi|76556611|emb|CAI48182.1| signal recognition particle receptor SRalpha [Natronomonas
           pharaonis DSM 2160]
          Length = 368

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 17/147 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L R+ + + +   +    G T  A A   +      D    + 
Sbjct: 175 IVFTGVNGVGKTTSIAKLARWFEERGHSSVLA--NGDTYRAGANEQI--EEHADALDKKI 230

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + + +  A      ++L D            R  +    +  L++I  
Sbjct: 231 ITHEQGGDPAAVIYDAVEYAEANDVDVVLGD---------TAGRLHTADDLMAQLEKID- 280

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYS 152
           + V PD T+   +   +  +   NR  
Sbjct: 281 RVVDPDLTLF--VDEAVAGQDATNRAK 305


>gi|14520718|ref|NP_126193.1| signal recognition particle receptor [Pyrococcus abyssi GE5]
 gi|5457934|emb|CAB49424.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54)
           [Pyrococcus abyssi GE5]
          Length = 322

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GKTT I+ L  +L++  + V +      T  A A     L       G + 
Sbjct: 126 ILFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQ--LEEHAKRVGVKV 181

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R  +    +D +++I+ 
Sbjct: 182 IKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMRKIA- 231

Query: 126 QEVMPDCTII 135
           +   P+  + 
Sbjct: 232 RVTKPNLVVF 241


>gi|170691345|ref|ZP_02882510.1| putative deoxynucleoside kinase [Burkholderia graminis C4D1M]
 gi|170143550|gb|EDT11713.1| putative deoxynucleoside kinase [Burkholderia graminis C4D1M]
          Length = 226

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G GKT+    L +    +     +   P   P  E             +   
Sbjct: 19  YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPEENPFLERFYR-----DTTRYALP 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
           A+   FA  R    ++V    L  G  L+ D F+   +  +A    ++   HL+      
Sbjct: 70  AQLH-FALQRAQQAQDVNAVQLA-GTPLIAD-FMTQKNDIFARLTLQEDEWHLYRALAAR 126

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFSRIQKRAVPMELQISDAY 166


>gi|307566423|ref|ZP_07628858.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
 gi|307344848|gb|EFN90250.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
          Length = 357

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 35/106 (33%), Gaps = 5/106 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V V  E     +     ++  +    
Sbjct: 1   MKR---IVLTGGPCAGKTTALVKVIEHFSSIGYKVFVIPEVPTLFSQAGMDYLTKNKHFF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A      A   DH    I   + +  I++CDR      AY 
Sbjct: 58  FEGEKATLDTQIALE-DHFSR-IAKTIKKPTIIVCDRGTMDISAYM 101


>gi|225718330|gb|ACO15011.1| Deoxynucleoside kinase [Caligus clemensi]
          Length = 251

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 34/211 (16%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
             EG  GAGKTT +  +++       +V    EP         R+ LL    +   ++  
Sbjct: 36  VVEGNIGAGKTTFLESIRKSSPPGLIEVV--EEPVQEWRTYKDRYDLLDIMYE--DSKKW 91

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSLQ 121
           + +F       +            I + +R    S A                + L +L 
Sbjct: 92  SFLFQIQVQLSMMKKYSLPPTRP-IRIMER----SLARFCFVENLYNNGHLNDIELHTLN 146

Query: 122 EISVQEVM-------PDCTIILDLPVDIGLKRV--QNRYSLRESACLDYF----ERKDVM 168
           ++    +         D  I L    ++  +R+  ++R    +S  L++F    E  +  
Sbjct: 147 DLYNFVIKHDCFLCQTDLIIYLRTSPEVAYERMLRRSRSEAEKSLSLEHFRNIHELHEDW 206

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199
           +  K +  F  +    P    ++D       
Sbjct: 207 LFRKTK--FQPL----PCPIVVIDGNQGIDD 231


>gi|296089001|emb|CBI38704.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 8/98 (8%)

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                 + + I  Q + PD  +  D   +   +R+ NR   R    +    ++  +  E 
Sbjct: 124 NEENRTAFENIVGQILEPDFVLFFDCSQEELTRRILNRNQGRVDDNIQAIPKRFQVYFES 183

Query: 173 ---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
                  +     +   +   +D+  S + V   + +I
Sbjct: 184 TLPVIDYY-----SSKGKVQKIDAERSIEEVFEAVKSI 216


>gi|319652962|ref|ZP_08007067.1| hypothetical protein HMPREF1013_03682 [Bacillus sp. 2_A_57_CT2]
 gi|317395311|gb|EFV76044.1| hypothetical protein HMPREF1013_03682 [Bacillus sp. 2_A_57_CT2]
          Length = 282

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M++   I  EG+ G+GK+T   L+   L +   +  +  E      A+     +     D
Sbjct: 1  MDT-KLILIEGLPGSGKSTTARLVHEILMQNGIESELYCEGDLNHPADY--ESVAYFEND 57

Query: 61 EFGAEAEAIVFAAARLDHVENVI 83
          ++    E   ++A R   +EN I
Sbjct: 58 QWHRLLEE--YSAFRDQIIENCI 78


>gi|192361169|ref|YP_001981354.1| gluconokinase [Cellvibrio japonicus Ueda107]
 gi|190687334|gb|ACE85012.1| gluconokinase [Cellvibrio japonicus Ueda107]
          Length = 196

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 72/212 (33%), Gaps = 52/212 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCGVDEF 62
           L I   G+ G+GKTT    L        Y        G    +E   AR        DE 
Sbjct: 21  LLIVM-GVSGSGKTTLAQRLAAHF---GYRCL----DGDDFHSEDAKARMARGEPLTDEM 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 + + +    H++     AL  G+         S  A+ G R + +     +L++
Sbjct: 73  R-----LPWVSNICHHLQQ----ALSAGEH--------SVLAFSGLRRAHRQ----ALRD 111

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--LDI 180
           + ++       + LD        RV NR     +  L              R  F  L+ 
Sbjct: 112 VGLKT----LVVFLDGDEATIQDRVNNRTGHFANPRL-------------VRSQFESLEC 154

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN-IVWEL 211
             N+ D    +D   S +++ T  ++ I+ +L
Sbjct: 155 PLNEKDVYR-IDVRQSPEAILTQAIDWIITQL 185


>gi|90962611|ref|YP_536527.1| deoxyguanosine kinase [Lactobacillus salivarius UCC118]
 gi|227891325|ref|ZP_04009130.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741]
 gi|301301096|ref|ZP_07207255.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821805|gb|ABE00444.1| Deoxyguanosine kinase [Lactobacillus salivarius UCC118]
 gi|227866903|gb|EEJ74324.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741]
 gi|300851308|gb|EFK79033.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 245

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 39/234 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60
           I+  GI G+GK++   +L + L  K Y      +  +     G   A   R        +
Sbjct: 2   ITLSGIIGSGKSSLTEILAKELGTKAYYEPVKDNPVLPIFYKGNEIAAKKRA---EGDKE 58

Query: 61  EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------SSY--AYQGE 108
                A  +  F   R   +   I+ A+ +   +L DR +          +    A Q E
Sbjct: 59  ATNPYAYLLQTFFLNRRFAM---IKKAMQDDNNIL-DRSIYEDEIFMRMNTEMGNATQVE 114

Query: 109 RDSSQHLFLDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            D  + L  + ++E  ++  +  PD  I + +  +  +KR++ R    E    D      
Sbjct: 115 YDIYKSLLHNMMEELPLASHKKSPDLMITIKVSYETMIKRIEKRGRDYELIEKDP---SL 171

Query: 167 VMIHEKRRQIFLDIARNQPDR-CHIVDSAH-----SFQ---SVATNILNIVWEL 211
           V  +++  + +    +        I+D        S +    V   + N + EL
Sbjct: 172 VDYYQRLLKHYDIWMKEYDASPLLIIDGDKYDFMESKEDRVQVLETVENKLLEL 225


>gi|302847847|ref|XP_002955457.1| hypothetical protein VOLCADRAFT_121426 [Volvox carteri f.
           nagariensis]
 gi|300259299|gb|EFJ43528.1| hypothetical protein VOLCADRAFT_121426 [Volvox carteri f.
           nagariensis]
          Length = 662

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 46/212 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65
           G  G+GK T    +K+     +Y            A +  R  + S  V     +E   E
Sbjct: 481 GGPGSGKGTQCDKIKQ-----DYKCVHLS------AGDLLRAEVKSGSVVGKKCEELMRE 529

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + + FA       + +I      GK  L D F                  LD  ++   
Sbjct: 530 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFE- 570

Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179
             +MP    +  D P +   KR+  R     R     +   ++     E+    +  +L 
Sbjct: 571 GNIMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQSLPVKDHYLA 630

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                  +CH++ +    + V  N++ ++  L
Sbjct: 631 Q-----GKCHVISAVPPPEEVYENVVALLDRL 657



 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 77/232 (33%), Gaps = 48/232 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----- 59
             I   G  G+GK T    +K+     +Y+           A +  R  + S        
Sbjct: 52  KIIFVLGGPGSGKGTQCDKIKQ-----DYECVHLS------AGDLLRAEVKSGSAVGSKC 100

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E   E + + FA       + +I      GK  L D F                  LD 
Sbjct: 101 EELMREGKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQ 142

Query: 120 LQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---R 173
            ++     +MP    +  D P +   KR+  R     R     +   ++     E+    
Sbjct: 143 AEQFESN-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQSLPV 201

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL--VQKRVSPLSSKK 223
           +  +L        +CH+V +      V  ++ NI+ +L   +K+ +   S +
Sbjct: 202 KDHYLAQ-----GKCHVVSAVPHPDVVYESVTNILDKLDAPKKQAAKADSPR 248



 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 66/209 (31%), Gaps = 46/209 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65
           G  G+GK T      + L+   Y+           A +  R  + S  V     +E   E
Sbjct: 276 GGPGSGKGTQC---AQILEE--YECVHLS------AGDLLRAEVKSGSVVGRKCEELMRE 324

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + + FA       + +I      GK  L D F                  LD  ++   
Sbjct: 325 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFE- 365

Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179
             +MP    +  D P +   KR+  R     R     +   ++     E+    +  +L 
Sbjct: 366 GNIMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFHTFLEQSLPVKDHYLA 425

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  +CHI+ +      V   +  ++
Sbjct: 426 Q-----GKCHIISAVPPPGEVFEVVKKVL 449


>gi|304316980|ref|YP_003852125.1| guanylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302778482|gb|ADL69041.1| guanylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 203

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 68/219 (31%), Gaps = 49/219 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N GL I   G  GAGK T    L +        V   TR+P      E           +
Sbjct: 3   NKGLLIVVSGPSGAGKGTVCKALLKKDNNLKLSVSMTTRKP---RNGEVDGENYFFTTTE 59

Query: 61  EFGAEAE--AIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +F    E   ++  A   D+     +  ++  + EG  ++                    
Sbjct: 60  KFKTLIENNMLLEWAKVYDNYYGTPKEFVQKNIDEGHDVI-------------------- 99

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER--KDVMIH 170
           L +D    + V++  P+   I  LP   +    R++ R +  E   L  F+   +++   
Sbjct: 100 LEIDIQGALKVKDKYPEGVFIFILPPSMEELKNRIKKRGTETEEEILKRFKSAYEEINFV 159

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +                 +++           IL I+ 
Sbjct: 160 SRY-------------NYVVIN--DDVDLAVDKILAIIK 183


>gi|254295415|ref|YP_003061438.1| uridine kinase [Hirschia baltica ATCC 49814]
 gi|254043946|gb|ACT60741.1| Uridine kinase [Hirschia baltica ATCC 49814]
          Length = 229

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 23/182 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-------------TPAA 47
           MN    I+  G  G+GK+T    L   L      V +  E                    
Sbjct: 1   MNKPYMIAITGGSGSGKSTLAQALLDKLGED--KVLLMGEDNYYKPREHQHPDAPLWSMK 58

Query: 48  EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
           E    V       +     EA + A  +   +   +            DR +D +     
Sbjct: 59  EMEERVDFDDPASKNMDMYEAHLVALRQGRTISQPVYDFTKH------DR-IDGAEKVLS 111

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                    + +L + S   +  D TI ++ P D+ L R   R     +  LD    + +
Sbjct: 112 PPPIIVCEGVHTLSDKSYFNLF-DLTIFVETPADLRLARRIERDVNERNRDLDRVLAQYL 170

Query: 168 MI 169
             
Sbjct: 171 NF 172


>gi|14591073|ref|NP_143148.1| putative kinase [Pyrococcus horikoshii OT3]
 gi|6831730|sp|O58998|KAD6_PYRHO RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|3257673|dbj|BAA30356.1| 180aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 180

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 59/216 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I+  G  G GKTT   LL + L  +   +     E G        R V      DE  
Sbjct: 1   MLIAITGTPGVGKTTVAKLLAKKLNYEYVSLKDFALEKGCG------RRV-----NDEVE 49

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E + + +   R            ++GK  + D                           
Sbjct: 50  VEIDELAYFIERE-----------LKGKNAVLDGH------------------------- 73

Query: 124 SVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +  +MP D  ++L     +  +R++ R   RE       E  +  + +      L  A 
Sbjct: 74  -LSHLMPVDLVVVLRAHPKLIGERLRERGYDREKIG----ENVEAELVDAV----LIEAI 124

Query: 183 NQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
            + +    VD+   S + V   I++++   ++KRV 
Sbjct: 125 EEHENVIEVDTTNKSPEDVVEEIVSLINSGIKKRVG 160


>gi|292669825|ref|ZP_06603251.1| guanylate kinase [Selenomonas noxia ATCC 43541]
 gi|292648622|gb|EFF66594.1| guanylate kinase [Selenomonas noxia ATCC 43541]
          Length = 199

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 62/203 (30%), Gaps = 35/203 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----GGTPAAEAARHVLLS 56
           M  GL I   G  G GK T    L            +TREP      +  + A R     
Sbjct: 1   MKKGLLIVISGASGTGKGTVCKEL------------LTREPAIAYSISATSRAPREGEQD 48

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                F    E     A         +              +  +  A    R ++    
Sbjct: 49  GREYYFRTREEFEAMIADGAFLEYADVYGN-----------YYGTPLAPIEVRRAAGEDI 97

Query: 117 LDSLQ---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF--ERKDVMI 169
           L  +     ++V E  PD T I  LP   +   +R+  R +  E +        R ++++
Sbjct: 98  LLEIDTQGALNVMERCPDGTFIFLLPPSYEELCRRITGRGTESEESIARRLAAARDEILL 157

Query: 170 HEKRRQIFL-DIARNQPDRCHIV 191
            ++ R   L D      +R   +
Sbjct: 158 GKRYRYAVLNDTVEAATERIRTI 180


>gi|227889189|ref|ZP_04006994.1| deoxyguanosine kinase [Lactobacillus johnsonii ATCC 33200]
 gi|268320242|ref|YP_003293898.1| deoxynucleoside kinases 2 [Lactobacillus johnsonii FI9785]
 gi|227850418|gb|EEJ60504.1| deoxyguanosine kinase [Lactobacillus johnsonii ATCC 33200]
 gi|262398617|emb|CAX67631.1| deoxynucleoside kinases 2 [Lactobacillus johnsonii FI9785]
          Length = 224

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++   +L ++L             G  P  E+     +L    +     
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSL 120
           A  +   F   R       I+ AL +   +L DR +   +  +Q   D  +     +D+ 
Sbjct: 51  AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTY 105

Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169
            E+ +  +M          PD  + +D+  D  LKR+Q R    E    D   E      
Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160

Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +++  + +          P     +D             Q V   I+  + E+
Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKLDFMASEEDRQEVLNQIVAKLKEM 211


>gi|159114529|ref|XP_001707489.1| Hypothetical protein GL50803_13091 [Giardia lamblia ATCC 50803]
 gi|157435594|gb|EDO79815.1| hypothetical protein GL50803_13091 [Giardia lamblia ATCC 50803]
          Length = 343

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 21/183 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  +G  GAGK+T    LK++L  + ++  +  E            + L         
Sbjct: 63  RIIVVDGPIGAGKSTFCKHLKKYLIDQGFEATIIEEAVADNHFGQNGGITLEEYYK--NP 120

Query: 65  EAEAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQ 113
              A  F      A     +         +   ++ DR+L S+ A+       G     Q
Sbjct: 121 RELAFQFQEQVVHALGKQLLHCRFAEEYQQYDFIIFDRWLPSTSAFILFKMSDGYITKEQ 180

Query: 114 HLFLDSL--QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-----ESACLDYFERKD 166
             +L  L    +    ++P   +   +   +    +++R S       E   LD   R+ 
Sbjct: 181 GQYLHYLIDHYMLRAGILPAFHVRFAIDPAVCEDHIKDRASDDPHRLCEVDALDTI-RQT 239

Query: 167 VMI 169
              
Sbjct: 240 NEF 242


>gi|329668132|gb|AEB94080.1| deoxyguanosine kinase [Lactobacillus johnsonii DPC 6026]
          Length = 224

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++   +L ++L             G  P  E+     +L    +     
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120
           A  +   F   R       I+ AL +   +L DR +   +  +Q   D  +     +D+ 
Sbjct: 51  AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATTEEVDTY 105

Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169
            E+ +  +M          PD  + +D+  D  LKR+Q R    E    D   E      
Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160

Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +++  + +          P     +D             Q V   I+  + E+
Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKLDFIASEEDRQEVLNQIVAKLKEM 211


>gi|330993869|ref|ZP_08317801.1| Adenylate kinase [Gluconacetobacter sp. SXCC-1]
 gi|329759137|gb|EGG75649.1| Adenylate kinase [Gluconacetobacter sp. SXCC-1]
          Length = 219

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 78/240 (32%), Gaps = 55/240 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I F G  GAGK T    L+      Q    D+        +P  +  + ++    +    
Sbjct: 3   IIFLGPPGAGKGTQSKRLEERYGIAQISTGDMLRAEVAADSPLGQQVKTIMAEGRLVPDD 62

Query: 64  AEAEAIVFAAARLDHVENVIR-PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 +  A     +E  IR P   +G   + D F          R  +Q   LD++  
Sbjct: 63  ------LIIAM----IEKRIRQPDCAKGF--ILDGF---------PRTRAQAEALDTM-- 99

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFER----------KDVMIH 170
           ++      D  ++LD+  D    R+  RY+  +      D F+R                
Sbjct: 100 LARSGQHIDAVLLLDVDEDALADRIAGRYTCAKCGAGYNDVFKRPKVEGTCDVCGGHEFI 159

Query: 171 EK---RRQI-------FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +   RR+        + ++         +  R + +D      +V   +  ++  + +K
Sbjct: 160 RREDDRRETVAARLKTYRELTAPILPYYEEEKRLYRIDGMADIDAVTQEVFAVIDRITKK 219


>gi|241668611|ref|ZP_04756189.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254877145|ref|ZP_05249855.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254843166|gb|EET21580.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 222

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 68/246 (27%), Gaps = 59/246 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKN----YDVHVTREPGGT-----PAA 47
           MN+   I+ +G  G GK T    L ++    L                 G          
Sbjct: 1   MNNSKIITVDGPSGVGKGTLSKKLAKYFDYKLLDSGAIYRIAALHCYNAGANLDNQDDVC 60

Query: 48  EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
           +      L+            ++  A     +       L              + AY  
Sbjct: 61  DKLES--LNISFKVQNDSIIVLLNNADVTKAIRTEQTGMLAS-----------KTSAYPK 107

Query: 108 ERDSSQHLFLDSLQEISVQE------------VMPDC--TIILDLPVDIGLKRVQNRYS- 152
            R       L      +               V PD      LD   ++   R Q RY  
Sbjct: 108 VRQMLHDKML----SFATDAGLVADGRDMGTVVFPDAKYKFFLDASSEV---RAQRRYDE 160

Query: 153 -LRESACLDYF----ERKDVMIHEKRRQIFLDIARNQP-DRCHIVD-SAHSFQSVATNIL 205
            L +    D++    + +     ++ R     +A  +P D   +VD S  S + V   +L
Sbjct: 161 LLTKGENPDFYKIKNDIEQRDFQDRNR----KVAPLKPADDAILVDTSNLSIEEVFQKVL 216

Query: 206 NIVWEL 211
           N +  L
Sbjct: 217 NHINNL 222


>gi|116630403|ref|YP_819556.1| deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323]
 gi|116095985|gb|ABJ61137.1| Deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323]
          Length = 225

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++   +L ++L             G  P  E+     +L    +     
Sbjct: 5   IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 51

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120
           A  +   F   R       I+ AL +   +L DR +   +  +Q   D  +     +D+ 
Sbjct: 52  AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATKEEVDTY 106

Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169
            E+ +  +M          PD  + +D+  D  LKR+Q R    E    D   E      
Sbjct: 107 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 161

Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +++  + +          P     +D             Q V   I+  + E+
Sbjct: 162 YKRLLRYYKPWYEKYDYSPK--MTIDGDKFDFMASEEDRQEVLNQIVAKLKEM 212


>gi|312795195|ref|YP_004028117.1| Deoxyguanosine kinase [Burkholderia rhizoxinica HKI 454]
 gi|312166970|emb|CBW73973.1| Deoxyguanosine kinase (EC 2.7.1.113) [Burkholderia rhizoxinica HKI
           454]
          Length = 249

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 15/160 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           ++  EG  G GKTT  + L      +         P                      A+
Sbjct: 42  YLVIEGPIGVGKTTLATQLATRWSMQTLLERAADNPF-------LERFYHDNARYALPAQ 94

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122
            + ++    + +     I  A   G  L  D FL   D  +A     D    L+      
Sbjct: 95  LDFLL----QRETQMRAIADARQRGTPLAAD-FLPQKDELFARLTLPDDEFTLYRALAAR 149

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           + +    PD  I L    +    R+Q R    E+   D +
Sbjct: 150 VPLARPAPDLVIYLQASPETLFARIQKRAIAMETHITDAY 189


>gi|3170607|gb|AAC27927.1| RNA guanylyltransferase [Crithidia fasciculata]
          Length = 697

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 67/207 (32%), Gaps = 43/207 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    +       +       + G  P  E  + V      D FG EA+   
Sbjct: 143 GCRGSGKTTQAVNVAERYHLLHLSSGDMFKEGKQPYVEVEQAV-----KDHFGPEAK--- 194

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R                I+L DRF+          +   +    +L        +P
Sbjct: 195 ---DRQY------------NGIVL-DRFV-------ATGEMDAYYLQAALN--VCALPVP 229

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRR-QIFLDIARNQPDRC 188
                L L    G+KR Q R   +  A    + E++   +      Q++  I       C
Sbjct: 230 -IVFWLQLDPKEGIKRAQQRGDQKGGADHWRYVEQRAQAM---VADQVYKKIGVLHTIDC 285

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKR 215
           + +D+ H    V   I +I+  L   R
Sbjct: 286 NAIDARH----VWDRIHSIINGLFPTR 308


>gi|325126634|gb|ADY85964.1| Deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 220

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 39/171 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L + L       +   E    P        +L     +     
Sbjct: 10  IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 57

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111
             ++        +E +   A       + DR            +D+  A    YQ     
Sbjct: 58  -FLLNTYFLNKRLEEINAAAGNRND--VLDRSIYEDLLFFNMNVDNGVAAPTEYQIY--- 111

Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             H  +D++ E         PD  I + + +D  LKR+  R   RE   LD
Sbjct: 112 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRG--REFEQLD 158


>gi|12044959|ref|NP_072769.1| guanylate kinase [Mycoplasma genitalium G37]
 gi|255660129|ref|ZP_05405538.1| guanylate kinase [Mycoplasma genitalium G37]
 gi|3844696|gb|AAC71325.1| guanylate kinase [Mycoplasma genitalium G37]
 gi|166078976|gb|ABY79594.1| guanylate kinase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 189

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 25/178 (14%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN+ G      G  G GK+T +  L    + +  Y +  T         E   +      
Sbjct: 1   MNNQGRIFVITGPSGVGKSTLVKALLDHFKEQLFYSISATTRKKRISEKEGIDYFFKDKD 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             E   + +A +  A   +H    ++                 S A Q  +     L L+
Sbjct: 61  EFENLIKQDAFIEWACYNNHYYGTLK-----------------SQAEQAIKSGIN-LMLE 102

Query: 119 SLQEISVQ--EVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              + ++Q     P   +++ +        LKR++ R    E+      E+  +   +
Sbjct: 103 IEYQGALQVKSKYPHNVVLIFIKPPSMQELLKRLKKRNDEDETTIKKRLEQAKIEFQQ 160


>gi|325293048|ref|YP_004278912.1| hypothetical protein AGROH133_06534 [Agrobacterium sp. H13-3]
 gi|325060901|gb|ADY64592.1| hypothetical protein AGROH133_06534 [Agrobacterium sp. H13-3]
          Length = 188

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 64/207 (30%), Gaps = 53/207 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64
            EG+ GAGKT+    +   LQ++ + V    RE    G     E     L      +   
Sbjct: 17  IEGVSGAGKTS----VATELQQRGFHVIHGDRELAYKGDPETGETMDVALFQGDDTKI-- 70

Query: 65  EAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                  A     H+ NV  +R  + + +  +          +      +   F+D   E
Sbjct: 71  -------AFRHRHHIWNVEKVRQLVADQEHAVT---------FFCGGSRNFRRFIDLFDE 114

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-- 180
                       +LD+     L+R+  R        L              RQ  L +  
Sbjct: 115 ----------VFVLDVDAATLLRRLAARPEDEFGGNL------------AERQFVLQLHA 152

Query: 181 -ARNQPDRCHIVDSAHSFQSVATNILN 206
              + P     +DS+ S   V  +IL 
Sbjct: 153 TKEDLPVGASAIDSSRSLGVVVDDILA 179


>gi|37747996|gb|AAH59563.1| Guk1 protein [Danio rerio]
          Length = 197

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 39/222 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M+    +   G  GAGK+T +  L +  +    + V H TR P          H +    
Sbjct: 1   MSGPRPVVLSGPSGAGKSTLLKRLMKEYEGVFGFSVSHTTRNPRPGEEDGKDYHFVTKEK 60

Query: 59  VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           + E   + E I    F+       ++ I     +  I + D                  +
Sbjct: 61  MQEGIDKDEFIENAEFSGNMYGTSKSSIEDVQAQNLICILD------------------V 102

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            +  ++ I   ++ P   I + +     +I  KR+++R +  E +     E   +     
Sbjct: 103 DIQGVRNIKKTDLNP---IYISIQPPSMEILEKRLRDRQTETEDSLQKRLEAARID---- 155

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                +++++ +P    IV      +     + +++ E ++K
Sbjct: 156 -----MELSK-EPGVFDIVIVNDDLEEAYEKLKSVLIEEIEK 191


>gi|238852757|ref|ZP_04643163.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4]
 gi|282850736|ref|ZP_06260111.1| deoxynucleoside kinase [Lactobacillus gasseri 224-1]
 gi|311111600|ref|ZP_07712997.1| deoxyguanosine kinase [Lactobacillus gasseri MV-22]
 gi|238834607|gb|EEQ26838.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4]
 gi|282558144|gb|EFB63731.1| deoxynucleoside kinase [Lactobacillus gasseri 224-1]
 gi|311066754|gb|EFQ47094.1| deoxyguanosine kinase [Lactobacillus gasseri MV-22]
          Length = 224

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++   +L ++L             G  P  E+     +L    +     
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120
           A  +   F   R       I+ AL +   +L DR +   +  +Q   D  +     +D+ 
Sbjct: 51  AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATKEEVDTY 105

Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169
            E+ +  +M          PD  + +D+  D  LKR+Q R    E    D   E      
Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160

Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +++  + +          P     +D             Q V   I+  + E+
Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKFDFMASEEDRQEVLNQIVAKLKEM 211


>gi|325270891|ref|ZP_08137478.1| deoxynucleoside kinase [Prevotella multiformis DSM 16608]
 gi|324986688|gb|EGC18684.1| deoxynucleoside kinase [Prevotella multiformis DSM 16608]
          Length = 204

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 30/195 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT  ++L    +R  +              +  + +        +    
Sbjct: 3   IAIAGNIGSGKTTLTTMLA---RRYGWKPRFESVDYNPYLEDYYKDI------KRWSFPM 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118
           E         D +E  IR     G+ ++ DR +         ++YA     D     +++
Sbjct: 54  EVFFLKERFRDLLE--IR---QSGESVVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
             ++++     PD  I L   V   +  ++ R    E    LDY E  +    E  R  +
Sbjct: 109 LFEDMTDAVRFPDLMIYLRSSVSHLVSNIEKRGREYEQKMPLDYLESLNRRYDEFIRDKY 168

Query: 178 LDIARNQPDRCHIVD 192
                    R   +D
Sbjct: 169 -------KGRVLTID 176


>gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002]
 gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002]
          Length = 186

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            TI LD+PV I ++R+++  S      +D  ERK   + ++RR  +      + D    +
Sbjct: 101 LTIWLDVPVPILVERLRSDTSRPLLQNVD-LERKLTQLLQQRRSRY-----AEADLHIQI 154

Query: 192 DSAHSFQSVATNILNIVWELVQK 214
                 ++VA +I+  +  +++K
Sbjct: 155 PGNRPPRAVAEDIIAQIPSVLRK 177


>gi|159114537|ref|XP_001707493.1| Hypothetical protein GL50803_32674 [Giardia lamblia ATCC 50803]
 gi|157435598|gb|EDO79819.1| hypothetical protein GL50803_32674 [Giardia lamblia ATCC 50803]
          Length = 366

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 12/165 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  +G  GAGK+     L    Q       V  E  G     A   + L     +  A
Sbjct: 72  RMIVVDGPIGAGKSLFCRRLVEHAQDSGLKAVVIEEVVGLECFSAY-GITLDEYYRDPHA 130

Query: 65  EAEAIVFAAARL---DHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHL 115
            A     A         +E        +  +++ DR+L S+ A+      +G     Q +
Sbjct: 131 NAYRFQLAVTHALADQLLEYRFTDKYKDYDLVIFDRWLPSTSAFVLFQVQEGHITGRQAM 190

Query: 116 FLDSLQEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           +L  L ++ +    ++P   +       I  +R+  R +  E   
Sbjct: 191 YLHYLIDVYMSYAGILPATHVRFATDPLICAQRIVQRAAEEEHRQ 235


>gi|150383505|sp|Q28H12|KCY_XENTR RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
          Length = 196

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 65/223 (29%), Gaps = 56/223 (25%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F+ F  G  GAGK T    + +                   A +  R             
Sbjct: 4   FVVFVLGGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----- 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117
                            +I   + +G+I+       L  R ++ + A  G +        
Sbjct: 48  -------------QYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGF 94

Query: 118 ----DSLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
               D+LQ          D    +  D   +  ++R   R      +  +    + +   
Sbjct: 95  PRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL--- 148

Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           EKR Q +L   R       +  +   VD++ S   V T + +I
Sbjct: 149 EKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDI 191


>gi|254445986|ref|ZP_05059462.1| adenylate kinases subfamily, putative [Verrucomicrobiae bacterium
           DG1235]
 gi|198260294|gb|EDY84602.1| adenylate kinases subfamily, putative [Verrucomicrobiae bacterium
           DG1235]
          Length = 388

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 51/224 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I+  G  GAGK T    L            ++        TP  E AR ++ + G+    
Sbjct: 4   IALFGPPGAGKGTQSERLVEDYNLHYISTGEILRKEMAEKTPLGEEARSIIAAGGLVSD- 62

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                        + +  +I   + +               +Q +           +Q  
Sbjct: 63  -------------EIIVQIIEKFITDN--------------HQAKGFLFDGFPRTYIQAY 95

Query: 124 SVQEVMPDC----TII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            ++ +M       T +  L +P ++ ++R+  R      +  +     +V+I  + R+ +
Sbjct: 96  ILEGLMIKLHSSLTCLINLQVPEEVSVERLLQRGKSSGRSDDN-----EVVIRNRLRE-Y 149

Query: 178 -------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                  L+  + +   CH  D+  S  +V  +I  +V + ++K
Sbjct: 150 NEKTLPVLNFYK-EKGLCHDADATASIDAVYESIKEVVEQELRK 192


>gi|320160435|ref|YP_004173659.1| adenylate kinase [Anaerolinea thermophila UNI-1]
 gi|319994288|dbj|BAJ63059.1| adenylate kinase [Anaerolinea thermophila UNI-1]
          Length = 220

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 60/240 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I   G  GAGK T  + + +           T         +  R  L +    E G  
Sbjct: 4   YIVLLGPPGAGKGTQATQIVQ-----------TFGLAHVSTGDLFRENLRNQ--TELGQL 50

Query: 66  AEAIVFAA------ARLDHVENVI-RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           A + + A         +  V   I RP   +G  +L D F  +       +  +    L 
Sbjct: 51  AASYMNAGKLVPDDVTIAMVRERITRPDCAQG--VLFDGFPRT-----VAQADALSAMLA 103

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS--------------LRESACLDY--- 161
            L          DC   + +P ++ ++R+  R S               ++    D    
Sbjct: 104 ELSGKV------DCVPYISVPAEVLVERLSGRISCPTCGRVYHVTNNPPKQPGVCDADGT 157

Query: 162 --FERKDV--MIHEKRRQIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVWEL 211
              +R+D       KR + +L     +     +R  +  +D   S + V+  ILN + ++
Sbjct: 158 PLIQREDDKPETVRKRIEEYLKNTAPLIDYYRERQLLVEIDGTQSIEVVSQQILNAIRKV 217


>gi|303235597|ref|ZP_07322204.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302484044|gb|EFL47032.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 370

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V +  E           ++  +    
Sbjct: 11  MKK---IVLTGGPCAGKTTALVKIMEHFSSIGYKVFIIPELPTLFLQAGMDYLTDNKQFF 67

Query: 61  EFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A   +  A   R   +   I+    +  +++CDR      AY 
Sbjct: 68  YEGEKATLEMQIAMEDRFQRMAETIK----QPVLMVCDRGTMDISAYM 111


>gi|301054092|ref|YP_003792303.1| hypothetical protein BACI_c25260 [Bacillus anthracis CI]
 gi|300376261|gb|ADK05165.1| hypothetical protein BACI_c25260 [Bacillus cereus biovar anthracis
           str. CI]
          Length = 186

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 70/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN+    I+   + G GKTT    L   L                      + +      
Sbjct: 1   MNNKTKIITIAAVSGGGKTTVTERLTEKLTNS-------------------KALYFDRYN 41

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     +   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 42  FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 92  LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 140

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEELYR 179


>gi|297799466|ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313453|gb|EFH43876.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 758

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 50/215 (23%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPG-GTPAAEAARHVLLSCGVDE 61
           FI+F  G  G+GK T    +      ++      + RE    T       +++    +  
Sbjct: 54  FITFVLGGPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVP 113

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                          +    +I+  L        D            +            
Sbjct: 114 --------------SEVTVKLIQKELES-----SD----------NRKFLIDGFPRTEEN 144

Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            ++ + ++   PD  +  D P +  +KRV NR   R           ++   +KR +IF 
Sbjct: 145 RVAFERIIRADPDVVLFFDCPEEEMVKRVLNRNQGRIDD--------NITTMKKRLKIFN 196

Query: 179 DIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
            + R          + + +++  +   +  ++L I
Sbjct: 197 ALNRPVIDYYKNKGKLYTINAVGTVDDIFQHVLPI 231


>gi|291319954|ref|YP_003515212.1| deoxyguanosine kinase [Mycoplasma agalactiae]
 gi|290752283|emb|CBH40254.1| Deoxyguanosine kinase [Mycoplasma agalactiae]
          Length = 220

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 67/225 (29%), Gaps = 36/225 (16%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQ--------RKNYDVHVTREPGGTPAAEAARHV 53
           + I   GI G   +GK+T  + L +            ++ +V  T         E   ++
Sbjct: 1   MLI---GISGMISSGKSTLTAKLHKHFNTSLMLKEYDEDSEVFNTF---LKWLYEKQPNL 54

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSS 112
            +             +       + +             +  DRF    Y +        
Sbjct: 55  TIGFQSYVVENHTTKLSELIDEFNKLNKNWET-----DHIFLDRFSIEHYIFANVNLRPK 109

Query: 113 QHLFLDSLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
              +LD    +    +     PD  I LD+  +   KR+  R    E   +D F   +  
Sbjct: 110 GQNYLDGYDALFTHLITKDETPDIAIYLDMSWETFHKRIFERGRQVE---IDNF-YANEE 165

Query: 169 IHEKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208
             +    ++ D+    A        I+++   +   V    L I+
Sbjct: 166 YFKTLYNLYKDLFIKQAEKFNLEYRIIETDNLNEDEVFEKALEII 210


>gi|220679591|emb|CAX13613.1| guanylate kinase 1 [Danio rerio]
          Length = 197

 Score = 46.6 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 39/222 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M+    +   G  GAGK+T +  L +  +    + V H TR P          H +    
Sbjct: 1   MSGPRPVVLSGPSGAGKSTLLKRLMKEYEGVFGFSVSHTTRNPRPGEEDGKDYHFVTKEK 60

Query: 59  VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           + E   + E I    F+       ++ I     +  I + D                  +
Sbjct: 61  MQEGIDKDEFIENAEFSGNMYGTSKSSIEDVQAQNLICILD------------------V 102

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            +  ++ I   ++ P   I + +     +I  KR+++R +  E +     E   +     
Sbjct: 103 DIQGVKNIKKTDLNP---IYISIQPPSMEILEKRLRDRQTETEDSLQKRLEAARID---- 155

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                +++++ +P    IV      +     + +++ E ++K
Sbjct: 156 -----MELSK-EPGVFDIVIVNDDLEEAYEKLKSVLIEEIEK 191


>gi|159488592|ref|XP_001702290.1| flagellar adenylate kinase [Chlamydomonas reinhardtii]
 gi|158269460|gb|EDO95880.1| flagellar adenylate kinase [Chlamydomonas reinhardtii]
          Length = 560

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 71/218 (32%), Gaps = 55/218 (25%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K   +     VH+        A +  R  + S    E G +
Sbjct: 78  IVFVLGGPGSGKGTQCDQIKEEYE----CVHL-------SAGDLLRAEVKSGS--EVGQK 124

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 125 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 164

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD  ++     +MP  T +  D P +   KR+  R     R     D   ++     ++ 
Sbjct: 165 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLDQS 223

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +  +L        +CH++ +    + V   +   +
Sbjct: 224 LPVKDHYLAQ-----GKCHVISAVPPPKEVYGKVKAAL 256



 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 55/210 (26%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K      +YD           A +  R  + S    E G +
Sbjct: 283 IVFVLGGPGSGKGTQCDKIKA-----DYDCVHLS------AGDLLRAEVKSGS--EVGQK 329

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 330 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 369

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD  ++     +MP  T +  D P +   KR+  R     R     D   ++     ++ 
Sbjct: 370 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFHTFLDQS 428

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSV 200
              +  +L        +CH++ +  +   V
Sbjct: 429 LPVKDHYLTQ-----GKCHVISAVAAPDDV 453


>gi|224058137|ref|XP_002192284.1| PREDICTED: similar to cytidylate kinase [Taeniopygia guttata]
          Length = 315

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 63/218 (28%), Gaps = 57/218 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A +  R      G            
Sbjct: 129 GGPGAGKGTQCARIVEK-----------YGYTHLSAGDLLRDERKRPGS----------- 166

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119
                      +I   + EG+I+       L  R +D + A   Q  +          D+
Sbjct: 167 -------QYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDN 219

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ  +   +   D    +  D   +I + R   R      +  +    + +   EKR   
Sbjct: 220 LQGWTKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNR---ESL---EKRINT 273

Query: 177 FL-------DIARNQPDRCHIVDSAHSFQSVATNILNI 207
           +L       D+      +   VD++ S   V   ++ I
Sbjct: 274 YLQSTKPIIDLYERM-GKVRKVDASKSVDEVFEKVVQI 310


>gi|154305500|ref|XP_001553152.1| hypothetical protein BC1G_08519 [Botryotinia fuckeliana B05.10]
 gi|150853306|gb|EDN28498.1| hypothetical protein BC1G_08519 [Botryotinia fuckeliana B05.10]
          Length = 204

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 68/236 (28%), Gaps = 65/236 (27%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F    G  G GK T   LL + L  ++  +H           +  R  L           
Sbjct: 8   FFVL-GPPGVGKGTQCMLLAQ-LSSRHRHIHHIS------IGDILRSELQKPSSKWAS-- 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI------------LLCDRFLDSSYAYQGERDSSQ 113
                           +IR  + EG+              +  R  D+    +       
Sbjct: 58  ----------------IIRANMAEGRTGPPEMSVSMLQEAIARRSEDTKPGKEMVFLIDG 101

Query: 114 -HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               +  +         P   + L  P+ I  +R+ +R     +      +    ++H++
Sbjct: 102 FPRSIYPISLFESTVCAPSLVLSLHCPLQILQERLLSR-----AKSSSRIDDGVEIMHKR 156

Query: 173 ----------RRQIFLD---IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                       + + +   +A         +D++ S + V  ++   V +++ + 
Sbjct: 157 FEQHVCATGPVIENYRERGLLAE--------IDASRSVEEVHRDVWGAVEKILGEH 204


>gi|322490716|emb|CBZ25979.1| putative adenylate kinase [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 220

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 68/236 (28%), Gaps = 60/236 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKR-----FLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGV 59
           I   G  G+GK T   LL +      L   N   +  + R P G   AE      L    
Sbjct: 5   IILFGPPGSGKGTVSHLLVKEYGFVHLSAGNLLREEVLKRSPLGLRCAEMMSEGSLIPDE 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--L 117
                                            L+C+R   S  A Q            L
Sbjct: 65  LVVD-----------------------------LVCNR--LSDQAVQKHGILLDGFPRTL 93

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164
              + +  +    D  I LD+  ++ L R  +R     +  +             D  + 
Sbjct: 94  RQAEVLRTRGFKFDMMIFLDVSPEVLLDRCLSRRLDPVTGRIYNLKSDPPSLDIVDRLQI 153

Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +       HE+R Q++      +  +  D    VD+    + V   +   + + +Q
Sbjct: 154 RSDDTKEKHERRMQVYNSQKATLIAHYSDIIIEVDAEPEIKVVFKELQMKINKRLQ 209


>gi|147905317|ref|NP_001082709.1| UMP-CMP kinase [Xenopus laevis]
 gi|111185528|gb|AAH54975.2| Cmpk1 protein [Xenopus laevis]
          Length = 216

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 60/217 (27%), Gaps = 55/217 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    + +                   A +  R                   
Sbjct: 33  GGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----------- 70

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + +GKI+       L  R ++ + A    +            D+
Sbjct: 71  -------QYGELIESYIRDGKIVPVEITISLLQRAMERTMAIDANKHKFLIDGFPRNEDN 123

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           LQ          D    +  D   +  ++R   R      +  +    + +   EKR Q 
Sbjct: 124 LQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL---EKRIQT 177

Query: 177 FLD----IARNQPDR--CHIVDSAHSFQSVATNILNI 207
           +L     I      R     VD++ S   V T + NI
Sbjct: 178 YLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNI 214


>gi|15835023|ref|NP_296782.1| adenylate kinase [Chlamydia muridarum Nigg]
 gi|270285189|ref|ZP_06194583.1| adenylate kinase [Chlamydia muridarum Nigg]
 gi|270289208|ref|ZP_06195510.1| adenylate kinase [Chlamydia muridarum Weiss]
 gi|301336585|ref|ZP_07224787.1| adenylate kinase [Chlamydia muridarum MopnTet14]
 gi|9910710|sp|Q9PKR0|KAD_CHLMU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|7190446|gb|AAF39261.1| adenylate kinase [Chlamydia muridarum Nigg]
          Length = 253

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 74/239 (30%), Gaps = 50/239 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDE 61
           LF+   G  G+GK T   LL   L  ++    D+        TP  +  +   L  G   
Sbjct: 6   LFLIIMGAPGSGKGTQSKLLASQLSLQHISSGDLLRNAVSQNTPLGQEIKS-YLDQGKLL 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  +V      + ++ + +  L+  K+    R  + +    G   +     L  L 
Sbjct: 65  PDQLVWKLVH-----EKLDELQQDTLLR-KLSFLSRSENGAI-LDGFPRTVAQAKL--LN 115

Query: 122 EISVQEVMPD-CTIILDLPVDIGLKRVQNRY----------------------------- 151
           E  +    PD   I+LD+  +  L R+ +RY                             
Sbjct: 116 EF-LCSYFPDYKIILLDISDEEVLNRLTSRYICPSCQGIYNKQQGFSRCPKCLVELTRRS 174

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                  LD  +       +     +  +      R   +D+    Q V  NIL+ + E
Sbjct: 175 DDTPEVILDRIQTYKQET-QPVLDYYAAL-----QRLITIDANAPTQQVFKNILDALPE 227


>gi|326335220|ref|ZP_08201416.1| deoxynucleoside kinase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692628|gb|EGD34571.1| deoxynucleoside kinase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 374

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 21/175 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  + L      K     +  E    P  E             F   
Sbjct: 181 YITVEGNIGAGKTSLATRLAGDFSGK----LLLEEFLSNPFLEDFYK-----EPQRFALA 231

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDS-SYAYQGERDSSQHLFL-DSLQE 122
            E + F   R   ++ V+  A  + KI L+ D +  S S  +  E   ++   L + +  
Sbjct: 232 TE-LNFLKDRYKQLQKVL--ANKKEKIPLIAD-YALSKSLIFASETLGAKEYTLYEEIFY 287

Query: 123 ISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEK 172
           +  + +  PD  I L    +I L+ +Q R    E       L+  ER  +   +K
Sbjct: 288 LFFERMEKPDLYIYLHQNTNILLQNIQKRGRSFETPISKEYLERIERSYLSFLKK 342


>gi|291401643|ref|XP_002717078.1| PREDICTED: deoxycytidine kinase [Oryctolagus cuniculus]
          Length = 375

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 38/231 (16%)

Query: 15  AGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------LLSCGVDEF 62
           AGK+T +++LK+  +   ++V    V R        +    +         +L    ++ 
Sbjct: 147 AGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNVLQMMYEKP 204

Query: 63  GAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
              +      A     R         +++   P L   + +  DR++ +S  Y+ +  + 
Sbjct: 205 ERWSFTFQSYACLSRIRAQLASLNGKLKDAENPVLFFERSVYSDRYIFASNLYESDCMNE 264

Query: 113 QHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-- 164
               +     D +     Q +  D  I L    +  L R+  R    E    L+Y E+  
Sbjct: 265 TEWTIYQDWHDWMNNQFGQNLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLH 324

Query: 165 ---KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +  ++H   +  F D  +  P     +D    F+    +++  V E +
Sbjct: 325 YKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHESLVEKVREFL 372


>gi|328766376|gb|EGF76431.1| hypothetical protein BATDEDRAFT_36288 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 4176

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T   LLK  L +     V     P         R  LL     +    
Sbjct: 1931 VVLVGPSGSGKSTIWRLLKNALHKTGQRLVSHITNPKAVD-----RQSLLGNMDMDTREW 1985

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + I+  A+R       ++ AL     ++ D                   +++SL  +
Sbjct: 1986 TDGILTYASR-----QAVKEALDVHTWIISD-------------GDIDPEWIESLNSV 2025


>gi|228934929|ref|ZP_04097760.1| hypothetical protein bthur0009_33830 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228824829|gb|EEM70630.1| hypothetical protein bthur0009_33830 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 195

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 8   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 57  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYNRKNNDRTRNRSTFEEQF 154


>gi|170034280|ref|XP_001845002.1| deoxynucleoside kinase [Culex quinquefasciatus]
 gi|167875635|gb|EDS39018.1| deoxynucleoside kinase [Culex quinquefasciatus]
          Length = 246

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 20/204 (9%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64
            EG  G+GKTT ++      Q+    V +  EP          ++L              
Sbjct: 20  IEGNIGSGKTTFLN----HFQKFKDRVCLLTEPVEKWRDCGGVNLLDLMYKEPNRWAMPF 75

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDSLQE 122
           +    +          +     +     +   R+  +++  A         ++  +  + 
Sbjct: 76  QTYVTLTMLNAHQLQTDKSIKLMERS--MFSARYCFVENMLASGSLHQGMYNILQEWYEF 133

Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--RRQIFLD 179
           I     +  D  + L    ++  +R+  R    ES     + ++   +HE       F  
Sbjct: 134 IHANIHIQADLIVYLRTSPEVVYERMMKRARSEESCVPLKYLQELHELHENWLIHGSFPR 193

Query: 180 IARNQPDRCHIVDSAHSFQSVATN 203
            A   P    ++D+     ++++ 
Sbjct: 194 AA---P--VLVLDADLDLNNISSE 212


>gi|116514927|ref|YP_813833.1| deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116094242|gb|ABJ59395.1| Deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 215

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 39/171 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L + L       +   E    P        +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111
             ++        +E +   A       + DR            +D+  A    YQ     
Sbjct: 53  -FLLNTYFLNKRLEEINAAAGNRND--VLDRSIYEDLLFFNMNVDNGVADPTEYQIY--- 106

Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             H  +D++ E         PD  I + + +D  LKR+  R   RE   LD
Sbjct: 107 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRG--REFEQLD 153


>gi|159463624|ref|XP_001690042.1| ODA5-associated flagellar adenylate kinase [Chlamydomonas
           reinhardtii]
 gi|158284030|gb|EDP09780.1| ODA5-associated flagellar adenylate kinase [Chlamydomonas
           reinhardtii]
          Length = 657

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 71/221 (32%), Gaps = 55/221 (24%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K      +Y+           A +  R  + S    E G +
Sbjct: 63  IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGLK 109

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 110 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 149

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD   +     +MP  T +  D P +   KR+  R     R     D   ++     E+ 
Sbjct: 150 LDQAAQFE-NSIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLEQS 208

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +  +L        +CH++ +  +   V   +  ++  L
Sbjct: 209 LPVKDHYLAQ-----GKCHVISAVAAPDDVYGKVKVVLEGL 244



 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 71/221 (32%), Gaps = 55/221 (24%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K      +Y+           A +  R  + S    E G +
Sbjct: 471 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGQK 517

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 518 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 557

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD  ++     +MP  T +  D P +   KR+  R     R     D   ++     E+ 
Sbjct: 558 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFHTFLEQS 616

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +  +L        +CH++ +  +   V   +   +  L
Sbjct: 617 LPVKDHYLTQ-----GKCHVISAVAAPDDVYGKVKVALEGL 652



 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 55/210 (26%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K      +Y+           A +  R  + S    E G +
Sbjct: 281 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGQK 327

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 328 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 367

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD  ++     +MP  T +  D P +   KR+  R     R     D   ++     E+ 
Sbjct: 368 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLEQS 426

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSV 200
              +  +L        +CH++ +    + V
Sbjct: 427 LPVKDHYLAQ-----GKCHVISAVPPPKEV 451


>gi|154345664|ref|XP_001568769.1| adenylate kinase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066111|emb|CAM43900.1| putative adenylate kinase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 220

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 77/239 (32%), Gaps = 60/239 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF+   G  G+GK T   LL +      Y         G+   E  R           G 
Sbjct: 3   LFVILFGAPGSGKGTVSDLLVKH-----YGFVHLS--AGSVLREEVRK------KSPLGL 49

Query: 65  EAEAIVFAAARL--DHVENVI-----RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +  AI+     +  + V +++      PA+    I L D F                  L
Sbjct: 50  KCAAIMTEGNLIPDELVVDLVCNRLREPAVQAHGI-LLDGF---------------PRTL 93

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164
              +E+S +    D  + LD+  +I L R  +R     +  +             D    
Sbjct: 94  RQAEELSTRGFKFDMLLFLDVSPEILLDRCLSRRLDPVTGRIYNLKSDPPPSDIVDRLLI 153

Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +       H++R QI+      +  +  D    +D+    + V       + E + K++
Sbjct: 154 RPDDTKEKHKRRMQIYNNQKAALMAHYSDIIIEIDADPEIKVVFQ----TLQERINKQL 208


>gi|289829609|ref|ZP_06547164.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar
          Typhi str. E98-3139]
          Length = 49

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTR 39
          +I  EG+EGAGKTT   ++   L++    ++  TR
Sbjct: 5  YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTR 39


>gi|229156146|ref|ZP_04284244.1| uridine kinase [Bacillus cereus ATCC 4342]
 gi|228627329|gb|EEK84058.1| uridine kinase [Bacillus cereus ATCC 4342]
          Length = 187

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 35/212 (16%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 2   MNKKTKIITIAAVSGGGKTTVTEGLTHKLMNS-------------------KALYFDSYT 42

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A+   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 43  FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IILDYPFAY 92

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L     Q +  D TI +D P+DI + R   R    E+    + + K  + +   R+ +L+
Sbjct: 93  LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEIHNDLKHYITYA--RKAYLE 148

Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
                +P+   ++D A S   +   I   ++ 
Sbjct: 149 ALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180


>gi|257066817|ref|YP_003153073.1| dephospho-CoA kinase [Anaerococcus prevotii DSM 20548]
 gi|256798697|gb|ACV29352.1| dephospho-CoA kinase [Anaerococcus prevotii DSM 20548]
          Length = 200

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 42/217 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+  +GK+T   +LK     K YD+          A E  R ++   G +    + 
Sbjct: 6   IVITGLIASGKSTVADILKE----KGYDLI--------SADEVNRDLIKKGGKNYIAIKN 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR------------FLDSSYAYQGERDSSQH 114
           E I   A   D ++   +  L E  I+  D+             + S+     E      
Sbjct: 54  EPIFAPAFDGDFLD---KKKLAE--IIFNDKEKMERLNEISHANIISAIDEMVENSKEDK 108

Query: 115 LFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +F++      +++  P D  +++    ++ +KR+  R  +     L   E +D       
Sbjct: 109 VFIEVPLFFKIKDRFPHDLVVLVTASREVQIKRLMARDKIDYDFALKKIESQD------- 161

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                ++   +     I+D++   +S+   I  I+  
Sbjct: 162 -----ELEEMKKQSDIIIDNSGDIESLRRQIEKIIKR 193


>gi|290476272|ref|YP_003469176.1| shikimate kinase II [Xenorhabdus bovienii SS-2004]
 gi|289175609|emb|CBJ82412.1| shikimate kinase II [Xenorhabdus bovienii SS-2004]
          Length = 174

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 68/210 (32%), Gaps = 52/210 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI   G  GAGKTT   LL   L    Y    T E            ++   G  
Sbjct: 1   MKQTLFIV--GARGAGKTTIGKLLAEALS---YTFIDTDESIQAFCGMTIADLVEQYGWT 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F                +E+ I     + K ++            G            +
Sbjct: 56  HFRE--------------LESQILKNASQNKCVIST----------GGGMILSSENRQYM 91

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ------NRYSLRESACLDYFERKDVMIHEKRR 174
           Q+     +     + L  P ++ +KR+        R SL   +  +  E     I  +R 
Sbjct: 92  QQ---NGI----VVYLQAPAEVLIKRLSLNPENTQRPSLTGKSITEEIES----ILTERE 140

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           Q++ + A        IVD+  S +++++ I
Sbjct: 141 QLYRECAN------FIVDANSSTENISSLI 164


>gi|299778997|ref|YP_003734191.1| hypothetical protein EME08_gp041 [Enterobacteria phage IME08]
 gi|298105726|gb|ADI55370.1| hypothetical protein [Enterobacteria phage IME08]
          Length = 181

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 26/121 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
               I  +G + +GK+T I  L   L  K Y +         P     + + L    D+ 
Sbjct: 5   KPKIIVIDGPDNSGKSTLIESL---LSDKKYRLI------DFPKKINGKCISLGTDNDK- 54

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                           +   +   L    + + DR   S+  Y G        +++ L++
Sbjct: 55  ---------------ALVETLYKFLDPNFVYILDRGYPSNIVYSGFLRGEMDPYVE-LED 98

Query: 123 I 123
            
Sbjct: 99  W 99


>gi|294460323|gb|ADE75743.1| unknown [Picea sitchensis]
          Length = 223

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 65/221 (29%), Gaps = 57/221 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    +        +            A +  R  + S   +          
Sbjct: 35  GGPGSGKGTQCEKIVENF---GF--------THLSAGDLLRAEIKSGSENG--------- 74

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120
                      +I   + EGKI+       S         A Q   +          +  
Sbjct: 75  ----------TMIENMIKEGKIV------PSEVTVKLLQKAMQESENDKFLIDGFPRNEE 118

Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
              + +    + P+  +  + P +  LKR+ NR   R    ++   ++  +  E      
Sbjct: 119 NRAAFENVTGIQPEFILFFNCPEEEMLKRLLNRNQGRVDDNVETITKRFRVFSESSLPVV 178

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             +     +   +   +D+  S + V  NI  +    +Q++
Sbjct: 179 NYY-----DSKGKVRKIDAVKSKEDVFENIKLLFAPFIQEK 214


>gi|238919801|ref|YP_002933316.1| hemin importer ATP-binding subunit [Edwardsiella ictaluri 93-146]
 gi|238869370|gb|ACR69081.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 260

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 35/213 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFG 63
            +   G  GAGK+T + LL  +L+        + +E    PA + A R  ++        
Sbjct: 34  LVVIIGPNGAGKSTLMRLLAGYLRPDSGRCTLLGKELAAWPAQQLAQRRAVMRQHSALAF 93

Query: 64  AEAEAIVFAAARL-------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +   V A  R          ++ V++     G + L DR   +        +  +   
Sbjct: 94  PFSVREVIAMGRAPCPEGQQQALQAVMQ---QSGCLALADRDYRTL----SGGEQQRVQL 146

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEK 172
             +L ++      P   + LD      L     ++ LR    +    R+ +     +H+ 
Sbjct: 147 ARALAQLWHPAPQP-RWLFLD-EPTSALDLFHQQHLLRLLHGMTR--REPLSVCCILHD- 201

Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSV 200
                L++A    DR  ++      ++ + + V
Sbjct: 202 -----LNLAALYADRILLLHQGTLVASGTPEQV 229


>gi|225710854|gb|ACO11273.1| UMP-CMP kinase [Caligus rogercresseyi]
          Length = 193

 Score = 46.2 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 67/209 (32%), Gaps = 35/209 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                        +A  +L +    +     E I 
Sbjct: 11  GGPGAGKGTQCAKIVEK---------------YGFVHLSAGDLLRAERQKKGSEYGELIE 55

Query: 71  FAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                   V   I  AL++  I+     RF    +       S+   +  S+  +   + 
Sbjct: 56  HHIVNGTIVPPAITCALLKNAIVSSSKTRFHIDGF---PRNQSNVDEWETSVAPLVDFKF 112

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF----LDIARNQ 184
           +    +  D   +I ++R  +R +       D  E       +KR   +    L + ++ 
Sbjct: 113 L----LFFDCKEEICVERCLSRGAAGSGRSDDNLES-----LKKRIATYMNSTLGVIKSY 163

Query: 185 --PDRCHIVDSAHSFQSVATNILNIVWEL 211
              DR    D++ +   V  ++  I  E+
Sbjct: 164 ETKDRVKRADASKTVDEVFNDVQKIFDEV 192


>gi|225703318|gb|ACO07505.1| Deoxycytidine kinase [Oncorhynchus mykiss]
          Length = 263

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 45/250 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------A 46
           M+    IS EG   AGK+T + LL+   Q K+++V    EP                   
Sbjct: 18  MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEV--APEPIARWCNVQTQHSEFEELTM 73

Query: 47  AEAARHVLLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCD 96
           ++ +   +L    ++    A      A     R        +    E  +      +  D
Sbjct: 74  SQKSGSNVLQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREAENPVQFFERSVYSD 133

Query: 97  RFLDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           R++ ++  Y+ E  +     +       L +   + +  D  I L    +  ++R+  R 
Sbjct: 134 RYIFAANLYESECLNETEWSIYQDWHGWLHKQFGKHIELDGIIYLRAAPERCMERLHRRG 193

Query: 152 SLRESA-CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS--FQSVA-T 202
              E    L+Y E+     +  + H+     +  +  N P     +D         V   
Sbjct: 194 REEEQGIPLEYLEKLHFKHESWLQHKTMCMGYKYL-NNVP--ILTLDVNEDFKVDQVKGA 250

Query: 203 NILNIVWELV 212
           +++  V E +
Sbjct: 251 DMVEKVKEFL 260


>gi|218904781|ref|YP_002452615.1| hypothetical protein BCAH820_3665 [Bacillus cereus AH820]
 gi|218534861|gb|ACK87259.1| conserved hypothetical protein [Bacillus cereus AH820]
          Length = 207

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 54  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151


>gi|209732798|gb|ACI67268.1| Deoxycytidine kinase [Salmo salar]
 gi|303664259|gb|ADM16136.1| Deoxycytidine kinase [Salmo salar]
          Length = 263

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 30/192 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---- 53
           M+    IS EG   AGK+T + LL+   Q K+++V    + R             +    
Sbjct: 18  MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNVQTQHSEFEELTVSQ 75

Query: 54  -----LLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRF 98
                +L    ++    A      A     R        +    E  +      +  DR+
Sbjct: 76  KNGGNVLQMMYEKPERWAYTFQTYAFMSRVRAQMKSTNGKLREAENPVQFFERSVYSDRY 135

Query: 99  LDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           + ++  Y+ E  +     +       L E   + +  D  I L    +  ++R+  R   
Sbjct: 136 IFAANLYESECLNETEWSIYQDWHGWLHEQFGKHIELDGIIYLRAAPERCMERLHRRGRE 195

Query: 154 RESA-CLDYFER 164
            E    L+Y E+
Sbjct: 196 EEQGIPLEYLEK 207


>gi|42519874|ref|NP_965804.1| deoxyguanosine kinase [Lactobacillus johnsonii NCC 533]
 gi|81667315|sp|Q74HC2|DGK2_LACJO RecName: Full=Deoxyguanosine kinase; Short=DGK; Short=DGUO kinase;
           AltName: Full=Deoxynucleoside kinase complex I
           F-component
 gi|41584164|gb|AAS09770.1| deoxyguanosine kinase [Lactobacillus johnsonii NCC 533]
          Length = 224

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 79/231 (34%), Gaps = 49/231 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G  GAGK++   +L ++L             G  P  E+     +L    +    +
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYE--NPK 48

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQE 122
             A +     L+     I+ AL +   +L DR +   +  +Q   D  +     +D+  E
Sbjct: 49  KYAFLLQVYFLNTRFRSIKSALTDDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYYE 107

Query: 123 ISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171
           + +  +M          PD  + +D+  D  LKR+Q R    E    D   E      ++
Sbjct: 108 L-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DYYK 162

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +  + +          P     +D             Q V   I+  + E+
Sbjct: 163 RLLRYYKPWYEKYDYSPK--MTIDGDKLDFMASEEDRQEVLNQIVAKLKEM 211


>gi|254495069|ref|ZP_05107993.1| 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase
           (HPPK)/deoxynucleoside kinase [Polaribacter sp. MED152]
 gi|85819419|gb|EAQ40576.1| 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase
           (HPPK)/deoxynucleoside kinase [Polaribacter sp. MED152]
          Length = 374

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 22/191 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+   ++      K         P      E             F  E
Sbjct: 179 YIAIEGNIGAGKTSLSKMMSDEFNAKIVLERFADNPFLPKFYE-------DKERFAFPLE 231

Query: 66  AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEI 123
                F A R   + +++ +  L +   ++ D ++  S  + Q    + ++L    + ++
Sbjct: 232 MS---FLADRYQQLSDDLAQLDLFKNF-VVSDYYIFKSLIFAQITLQNDEYLLYRKMFDL 287

Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IA 181
             +E+  PD  + L       L+ ++ R    E          +    +K    +   I+
Sbjct: 288 MYKEITKPDLYVYLYQNTTRLLENIKKRGREYEQNI-------EASYLQKIHDGYKSFIS 340

Query: 182 RNQPDRCHIVD 192
             Q     ++D
Sbjct: 341 TQQNLNTLVID 351


>gi|297820876|ref|XP_002878321.1| hypothetical protein ARALYDRAFT_486486 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324159|gb|EFH54580.1| hypothetical protein ARALYDRAFT_486486 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 202

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 61/204 (29%), Gaps = 45/204 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + L +                   A +  R  + S              
Sbjct: 28  GGPGSGKGTQCANLVKHFS-----------YTHFSAGDLLRAEIKSGSQ----------- 65

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125
           F A         I+  ++EG+I+  +           E   +    +D         I  
Sbjct: 66  FGAM--------IQSTIVEGRIVPSE-ITVKLLCKAMEESGNDKFLIDGFPRNEENRIVF 116

Query: 126 QE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +    + P   +  D P +   +R+ +R   RE   ++   ++  +  E      L I  
Sbjct: 117 ENVAKIEPAFVLFFDCPEEELERRIMSRNQGREDDNIETINKRFKVFVEST----LPIIS 172

Query: 183 --NQPDRCHIVDSAHSFQSVATNI 204
                 +   +++A   + V   +
Sbjct: 173 YYESKGKLRKINAAKPSEEVFEAV 196


>gi|228861300|ref|YP_002854323.1| deoxynucleoside kinase/thymidine kinase [Soft-shelled turtle
           iridovirus]
 gi|190889006|gb|ACE96050.1| thymidine kinase [Rana grylio virus 9506]
 gi|194307580|gb|ACF42310.1| deoxynucleoside kinase/thymidine kinase [Soft-shelled turtle
           iridovirus]
          Length = 195

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 80/219 (36%), Gaps = 40/219 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  GAGK+T +      L+   Y+V        +   +     L      +F ++ 
Sbjct: 7   IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59

Query: 67  EAIVFAAARLDHVENVIRPALME--GKILLCDRFL-----DSSYAY-QGERDSSQHLFLD 118
           + ++        +++ I+ A  +   ++++ +R         + A  QG+   ++H  L 
Sbjct: 60  KIML--------IQSEIQRAAKKSDNRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLV 111

Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            + E      +P D  I L+ P +  ++R+  R    E           V         F
Sbjct: 112 QIWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF 161

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                  PD         S + V  N + ++ ++V + V
Sbjct: 162 ----ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194


>gi|258648474|ref|ZP_05735943.1| guanylate kinase [Prevotella tannerae ATCC 51259]
 gi|260851234|gb|EEX71103.1| guanylate kinase [Prevotella tannerae ATCC 51259]
          Length = 187

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 77/218 (35%), Gaps = 45/218 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTP---------AAEAARHVL 54
             I F    G+GK+T I+ L       ++ +  T R P G            AE  R  +
Sbjct: 3   KIIVFSAPSGSGKSTIINYLMDQQLNLHFSISATSRPPRGKEQHGVEYYFLTAEDFRQRI 62

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 EF    E   +   + +     +   L +G+ ++CD                  
Sbjct: 63  ADGEFLEFCEVYEGRYYGTLKAE-----VDRLLAKGENVICD---------------VDV 102

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +   +++ I         T+ + +P    L+ +++R + R +   +  E       E+ R
Sbjct: 103 VGAQNIKRIYGDRA---LTVFIKVP---SLEVLRHRLTARGTDAPEVIE-------ERIR 149

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +   +++        +++   + ++V  +   +V + +
Sbjct: 150 RADYELSEADKFDATLIN--DNLETVLKSAKALVSQFL 185


>gi|163783355|ref|ZP_02178348.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881463|gb|EDP74974.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 213

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 79/242 (32%), Gaps = 65/242 (26%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L   F G  GAGK T    L + L         T         +  R  +      
Sbjct: 1   MRKNL--VFLGPPGAGKGTQAKRLAQEL---GLMHIST--------GDILREAVKKGTPL 47

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKI-----LLCDRFLDSSYAYQGERDSSQHL 115
              A+         + + V + +  AL+E  +     ++ D F          R  +Q  
Sbjct: 48  GKKAKE-----YMDKGELVPDDLIVALIEEVMPPEGGVIFDGF---------PRTIAQAE 93

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY 161
            LD  + +S + +  D  ++ D+P ++ ++R+  R        +              D 
Sbjct: 94  ALD--EMLSKKGMGIDAVVLFDVPDEVVVERLSGRRVCPSCGAVYHIKFNPPENDEVCDR 151

Query: 162 ----FERKDVMIHEKRR---QIFLDIARNQP-----DR---CHIVDSAHSFQSVATNILN 206
                 ++D    E  R   +++    + +P     +R      +D++   + V   +  
Sbjct: 152 CGTKLIQRDDDREEVVRNRLEVYRR--QTEPLIEYYERKGILIRLDASKEIEEVYQELKK 209

Query: 207 IV 208
           +V
Sbjct: 210 VV 211


>gi|110597600|ref|ZP_01385885.1| Guanylate kinase [Chlorobium ferrooxidans DSM 13031]
 gi|110340720|gb|EAT59197.1| Guanylate kinase [Chlorobium ferrooxidans DSM 13031]
          Length = 192

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 64/216 (29%), Gaps = 40/216 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  I F    G GK+T    L   +    + V   TRE       E   +  LS    
Sbjct: 7   RQGKLIVFSAPSGTGKSTIAKHLLERIPDIRFSVSATTREKRVGEV-EGINYYFLSRKDF 65

Query: 61  EFGAEA----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E    +    E   F       + +  R  +  G  LL D                    
Sbjct: 66  EEKIRSGGFIEHEFFFGNHYGTLLDKTREVIESGSHLLLD-------------------- 105

Query: 117 LDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           LD    ++++ + P+    I    P   +I   R++ R S  E +     ER  +     
Sbjct: 106 LDVKGALNLKRLFPENSLLIFFK-PPSMEILEARLKGRESEDEESLKLRLERARLE---- 160

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                L+ A          +   + ++V   +   +
Sbjct: 161 -----LEYAERFDAVIVNDNLDLTVETVTEKVRKFL 191


>gi|322701069|gb|EFY92820.1| uridylate kinase [Metarhizium acridum CQMa 102]
          Length = 307

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 62/219 (28%), Gaps = 46/219 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  + L +      L      +   +E  G+   +  R  + +  +      
Sbjct: 118 GGPGAGKGTQCANLVKQYGFTHLSA-GDLLRAEQERPGSQFGDLIRDYIKNGLIVPMEV- 175

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                     +  +EN +  AL         RFL   +             LD   +   
Sbjct: 176 ---------TIQLLENAMTEALQSNGNATKGRFLIDGF----------PRKLDQAYKFE- 215

Query: 126 QEVMPD-CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR-- 182
           + V P    +  D P  +  +R+  R      A  +          E  R+ F       
Sbjct: 216 ESVCPARMVLFFDCPEKVMEERLLERGKTSGRADDNA---------ESIRKRFRTFIETS 266

Query: 183 -------NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                   +  +   +D+  +   V  N    + E   K
Sbjct: 267 MPVVDYYEKQGKVVKIDATPTPDQVFANTKARLTEKFGK 305


>gi|116181662|ref|XP_001220680.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88185756|gb|EAQ93224.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 333

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 45/220 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  + L R      L      +   ++  G+   +  R  + +  +      
Sbjct: 145 GGPGAGKGTQCARLVRDYHFTHLSA-GDLLRAEQDRPGSQYGQLIRDCIKNGDIVPM-EV 202

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++  A R     + I+ +       L D          G             +E+  
Sbjct: 203 TVALLENAMR-----DAIQASGGRNGKFLID----------GFPRKMDQAL--KFEEVVC 245

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182
                   +  D P     +R+  R      A  +          E  R+ F        
Sbjct: 246 PAK---LVLFYDCPEAEMERRLLERGKTSGRADDNA---------ESIRKRFRTFVETSM 293

Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                  + +R   V++  +   V  +    + +++  + 
Sbjct: 294 PVVDHYEKENRVVKVNATDTPDGVYADTQARLRKVLGDKF 333


>gi|325953983|ref|YP_004237643.1| deoxyadenosine kinase [Weeksella virosa DSM 16922]
 gi|323436601|gb|ADX67065.1| Deoxyadenosine kinase [Weeksella virosa DSM 16922]
          Length = 204

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 34/197 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL +            +        +   +  L    ++    +
Sbjct: 3   IAIAGNIGAGKTTLTKLLAK------------QYNWTAQFEDVDHNPYLDDFYNDMAKWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
             +   F  +R   V+ +       G  ++ DR  + D+       +D       D    
Sbjct: 51  FNLQIYFLGSRFQQVKEI----RESGLNIIQDRTIYEDAHIFASNLKDMGLLSTRDYENY 106

Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           + V  +M      PD  I L   +   + ++Q R    ES+         +    +  + 
Sbjct: 107 LRVFNLMTSFVKAPDLLIYLKASIPTLVAQIQKRGREYESSI-------SIDYLNRLNEK 159

Query: 177 FLDIARNQPD-RCHIVD 192
           +     N  + +  ++D
Sbjct: 160 YNKWIDNYTEGKLLVID 176


>gi|32996721|ref|NP_872612.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like [Rattus
           norvegicus]
 gi|30171809|gb|AAP20092.1| NADH dehydrogenase 1 alpha subcomplex 10-like protein [Rattus
           norvegicus]
          Length = 355

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 20/168 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58
           I+ +G   +GK      +   L  K+Y     +    T        +  S          
Sbjct: 60  ITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYD 119

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108
                D      ++ ++ A+RL    + +   L  G+ ++ +R + S + +      +G 
Sbjct: 120 DPKSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNRGF 178

Query: 109 RDSSQHLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRE 155
                    + ++ +++ E +P    I +D+PV     R+Q +    E
Sbjct: 179 IRKQCVDHYNEIKRLTLPEYLPSHAVIYIDVPVSEIQSRIQKKGDPHE 226


>gi|49186450|ref|YP_029702.1| hypothetical protein BAS3446 [Bacillus anthracis str. Sterne]
 gi|165870965|ref|ZP_02215616.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167636324|ref|ZP_02394625.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167641501|ref|ZP_02399750.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170689496|ref|ZP_02880685.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170709145|ref|ZP_02899571.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177652479|ref|ZP_02934946.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190564497|ref|ZP_03017418.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227813514|ref|YP_002813523.1| hypothetical protein BAMEG_0918 [Bacillus anthracis str. CDC 684]
 gi|229601121|ref|YP_002867845.1| hypothetical protein BAA_3743 [Bacillus anthracis str. A0248]
 gi|254686220|ref|ZP_05150079.1| hypothetical protein BantC_20500 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254726014|ref|ZP_05187796.1| hypothetical protein BantA1_26745 [Bacillus anthracis str. A1055]
 gi|254738693|ref|ZP_05196396.1| hypothetical protein BantWNA_26309 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744749|ref|ZP_05202427.1| hypothetical protein BantKB_27750 [Bacillus anthracis str. Kruger
           B]
 gi|254753011|ref|ZP_05205047.1| hypothetical protein BantV_11086 [Bacillus anthracis str. Vollum]
 gi|254759282|ref|ZP_05211308.1| hypothetical protein BantA9_13321 [Bacillus anthracis str.
           Australia 94]
 gi|49180377|gb|AAT55753.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|164713176|gb|EDR18702.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167510583|gb|EDR85980.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167528251|gb|EDR91028.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170125948|gb|EDS94849.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170666546|gb|EDT17320.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172082153|gb|EDT67220.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190563814|gb|EDV17778.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227005145|gb|ACP14888.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|229265529|gb|ACQ47166.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
          Length = 176

 Score = 46.2 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 36/170 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 54  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLD 160
            L  L+E        D    LD+       R      +NR +  E   +D
Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQFYVD 154


>gi|324119796|gb|EGC13676.1| hypothetical protein ERBG_00384 [Escherichia coli E1167]
          Length = 252

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 52/236 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  DY E +D +         +        +   +D+   +  V       V
Sbjct: 194 ---KPDHDYAELQDKI-------GVMSTIGYNGTKILEIDARAPYSEVLEQAQKAV 239


>gi|149927696|ref|ZP_01915948.1| Deoxynucleoside kinase [Limnobacter sp. MED105]
 gi|149823522|gb|EDM82752.1| Deoxynucleoside kinase [Limnobacter sp. MED105]
          Length = 204

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 23/161 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G GKT+   L+ +  Q +     +  +P   P  E                +   
Sbjct: 2   IEGPIGVGKTSLARLIAQRFQAE----LLLEKPEDNPFLEKFYQ---EPARYALPTQ--- 51

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISV 125
           + F   R+  + ++ +    E  +++ D FL   D  +A      +     L   Q+I  
Sbjct: 52  LFFLFQRIGQLRDLTQRDFFEN-MVVSD-FLLEKDRMFA----SLTLDEEELKLYQQIYQ 105

Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
               Q  +PD  I L       ++RVQ R +  E    + +
Sbjct: 106 HQSPQTSVPDLVIYLQASPQALIERVQKRATPYEVNITEAY 146


>gi|65320928|ref|ZP_00393887.1| COG1428: Deoxynucleoside kinases [Bacillus anthracis str. A2012]
          Length = 179

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 36/170 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 8   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 57  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLD 160
            L  L+E        D    LD+       R      +NR +  E   +D
Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQFYVD 157


>gi|166363926|ref|YP_001656199.1| guanylate kinase [Microcystis aeruginosa NIES-843]
 gi|166086299|dbj|BAG01007.1| guanylate kinase [Microcystis aeruginosa NIES-843]
          Length = 184

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 60/212 (28%), Gaps = 35/212 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I   G  G GK T +  L          V   TR P          + L     
Sbjct: 1   MQPGQLIVITGPSGVGKGTLVRHLLTRFPNLYLSVSATTRPPRPGEIEGEDYYFLDRPSF 60

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E  A  E +    +A       ++ I   L  G+ ++                    + 
Sbjct: 61  EEKMAAGEFLESAEYAGNYYGTPQSAIAAQLATGQTVIL------------------EIE 102

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+  +++           IL    +   +R++ R    E+A     ER            
Sbjct: 103 LEGARQVCQSFPEARRIFILPPSFEELERRLRGRGKDAETAIARRLERAQEE-------- 154

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            L  +   PD+          ++    I  I+
Sbjct: 155 -LAASEEFPDQIV----NDDLETALDAIEKII 181


>gi|301603605|ref|XP_002931455.1| PREDICTED: UMP-CMP kinase isoform 1 [Xenopus (Silurana) tropicalis]
          Length = 219

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 65/223 (29%), Gaps = 56/223 (25%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F+ F  G  GAGK T    + +                   A +  R             
Sbjct: 27  FVVFVLGGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----- 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117
                            +I   + +G+I+       L  R ++ + A  G +        
Sbjct: 71  -------------QYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGF 117

Query: 118 ----DSLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
               D+LQ          D    +  D   +  ++R   R      +  +    + +   
Sbjct: 118 PRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL--- 171

Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
           EKR Q +L   R       +  +   VD++ S   V T + +I
Sbjct: 172 EKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDI 214


>gi|220918402|ref|YP_002493706.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956256|gb|ACL66640.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 310

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 68/245 (27%), Gaps = 58/245 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF--GAEAE 67
           G +GAGKTT I  L   L     +    R  G  P + A R  L L             E
Sbjct: 47  GPDGAGKTTAIRALAGLLALDGGEA---RVLGADPLSGANRERLGLMPQQYSLYRDLTVE 103

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLC--DRFLD------SSYAY-------------- 105
             +   ARL  +   +     E  + +   DRF D      S   Y              
Sbjct: 104 ENLHFFARLYVLPRAVYRERKERLLAITRLDRFTDRRADALSGGMYKKLALACALLHEPE 163

Query: 106 --------QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP--------VDIGL-KRVQ 148
                    G    S+      L E          T+++  P          + L  R +
Sbjct: 164 VLLLDEPTNGVDPVSRRELWALLHEFVHGG----MTVLVSTPYMDEAERCSRVALVHRGR 219

Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP---------DRCHIVDSAHSFQS 199
                   A +  FE +   +H   R+         P          R  +V +  +   
Sbjct: 220 ALLDGEPGALIARFEDEAYEVHGGDRERLDAALAAHPAVLAASPAGARLKVVVARGARDE 279

Query: 200 VATNI 204
           VA  I
Sbjct: 280 VARAI 284


>gi|90416968|ref|ZP_01224897.1| Deoxynucleoside kinase [marine gamma proteobacterium HTCC2207]
 gi|90331315|gb|EAS46559.1| Deoxynucleoside kinase [marine gamma proteobacterium HTCC2207]
          Length = 228

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 59/172 (34%), Gaps = 24/172 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  G GKTT    L       NY++ +                      +    +
Sbjct: 21  YIAIEGPIGIGKTTLAKRLAHSF---NYEILL----EDAQENPFLERFYQDRRSNALPTQ 73

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI---L-LCDRFL---DSSYAYQGERDSSQHLFLD 118
              + F   R+  ++      L +G I   + + D FL   D  +A     D    L+  
Sbjct: 74  ---LFFLFQRMRKLQE-----LRQGDIFQQVRIAD-FLIEKDPLFAKITLDDDEYRLYQT 124

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169
               I      PD  + L  P +  L RVQ R +  E +  L Y ++ +   
Sbjct: 125 VYDNIISDLPKPDLVVYLQAPTETLLDRVQLRGAPSERSIELSYLQQLNDAY 176


>gi|15238822|ref|NP_199595.1| AMK2 (Adenosine monophosphate kinase); ATP binding / adenylate
           kinase/ nucleobase, nucleoside, nucleotide kinase/
           nucleotide kinase/ phosphotransferase, phosphate group
           as acceptor [Arabidopsis thaliana]
 gi|29427999|sp|Q9FIJ7|KADC2_ARATH RecName: Full=Probable adenylate kinase 2, chloroplastic; Short=AK
           2; AltName: Full=ATP-AMP transphosphorylase 2; Flags:
           Precursor
 gi|10177920|dbj|BAB11331.1| unnamed protein product [Arabidopsis thaliana]
 gi|15146328|gb|AAK83647.1| AT5g47840/MCA23_18 [Arabidopsis thaliana]
 gi|24111333|gb|AAN46790.1| At5g47840/MCA23_18 [Arabidopsis thaliana]
 gi|332008196|gb|AED95579.1| adenosine monophosphate kinase [Arabidopsis thaliana]
          Length = 283

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 47/232 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   +GK T   L+       +              +E  R         +   + 
Sbjct: 67  IMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQLVPDE 126

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             ++    RL   ++  +  L++G       +  S  A Q                    
Sbjct: 127 IVVMMVKDRLSQTDSEQKGWLLDG-------YPRS--ASQATALKG-------------F 164

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----ERKDVMIHEKRRQIFLDIA 181
              PD  I+L++P +I ++RV  R     +  + +      E +++ +  +  Q F D  
Sbjct: 165 GFQPDLFIVLEVPEEILIERVVGRRLDPVTGKIYHLKYSPPETEEIAV--RLTQRFDDTE 222

Query: 182 RNQPDRCHI------------------VDSAHSFQSVATNILNIVWELVQKR 215
                R                     ++   S + V   I + + EL+Q+R
Sbjct: 223 EKAKLRLKTHNQNVSDVLSMYDDITIKIEGNRSKEEVFAQIDSSLSELLQER 274


>gi|217076456|ref|YP_002334172.1| gmk guanylate kinase [Thermosipho africanus TCF52B]
 gi|217036309|gb|ACJ74831.1| gmk guanylate kinase [Thermosipho africanus TCF52B]
          Length = 210

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 32/222 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G      G  G GKT+ IS L   L+   + V   TR P            +      E
Sbjct: 2   KGTLFVVSGPSGVGKTSIISALMNKLENIVFSVSCTTRPPRPGEVDGVDYFFVSRDKFIE 61

Query: 62  FGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              + E + +A    +     +  +   + +G  ++ D  +D   A Q +R+        
Sbjct: 62  MREKGEFLEWAEVHGNLYGTPKKFVLENIEKGNRIILD--IDVQGALQVKRNFD------ 113

Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                       D   I   P   ++  +R+  R +    + L   E     + +     
Sbjct: 114 ------------DAVFIFVAPPSYEVLKERLLKRGTENSQSMLKRLENAKWEMSKIVEFD 161

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVAT--NILNIVWELVQKRV 216
           +L +  +         +  S   +A       I+ E + KR+
Sbjct: 162 YLIVNSDLEKSIL---AMKSI-VIAESYRTRRILDEELIKRL 199


>gi|213511889|ref|NP_001134661.1| deoxycytidine kinase [Salmo salar]
 gi|209735048|gb|ACI68393.1| Deoxycytidine kinase [Salmo salar]
          Length = 263

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 30/192 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---- 53
           M+    IS EG   AGK+T + LL+   Q K+++V    + R             +    
Sbjct: 18  MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNVQTQHSEFEELTVSQ 75

Query: 54  -----LLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRF 98
                +L    ++    A      A     R        +    E  +      +  DR+
Sbjct: 76  KNGGNVLQMMYEKPERWAYTFQTYAFMSRVRAQMKSTNGKLREAENPVQFFERSVYSDRY 135

Query: 99  LDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           + ++  Y+ E  +     +       L E   + +  D  I L    +  ++R+  R   
Sbjct: 136 IFAANLYESECPNETEWSIYQDWHGWLHEQFGKHIELDGIIYLRAAPERCMERLHRRGRE 195

Query: 154 RESA-CLDYFER 164
            E    L+Y E+
Sbjct: 196 EEQGIPLEYLEK 207


>gi|194207483|ref|XP_001494911.2| PREDICTED: similar to UMP-CMP kinase [Equus caballus]
          Length = 174

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 26/150 (17%)

Query: 78  HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125
               +I   + +GKI+       L  R +D + A   Q  +          D+LQ  +  
Sbjct: 26  QYGELIEKYIKDGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNEDNLQGWNKT 85

Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
            +   D    +  D   +I ++R   R      +  +    + +   EKR Q +L   + 
Sbjct: 86  MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKP 139

Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207
                 +  +   +D++ S   V   ++ I
Sbjct: 140 IIDLYEEMGKVKKIDASKSVDEVFDEVVKI 169


>gi|301610883|ref|XP_002934979.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1 [Xenopus (Silurana)
            tropicalis]
          Length = 4084

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     +    
Sbjct: 1941 VVIVGPSGAGKSTLWRMLRAALNKIGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 1995

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R +      ++CD                   +++SL  +
Sbjct: 1996 SDGVLTNSAR-----QVVRESQDINSWIICD-------------GDIDPEWIESLNSV 2035


>gi|156548617|ref|XP_001608151.1| PREDICTED: similar to adenylate kinase isoenzyme [Nasonia
           vitripennis]
          Length = 192

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 67/216 (31%), Gaps = 47/216 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-------GGTPAAEAARHVLLSCGVDEFG 63
           G  G GK T    +   ++   + VH++           G+P     + ++         
Sbjct: 8   GGPGCGKGTQCDRI---IKNYGF-VHLSSGDLLRDEVASGSPRGAELQELMSKGLFVPTD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                          ++  I  A  E    K +L D +                  L+  
Sbjct: 64  VVLSL----------IKERIEKAKAENPDTKGVLIDGY---------------PRELEQG 98

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179
            +        D  I  D+  +  + R+  R +       D  E       +KR +IF + 
Sbjct: 99  LQFEKDVCPVDLIIFFDVKNETLISRLLGRAAAAAVKRADDNE----ETIKKRIEIFNEK 154

Query: 180 ---IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              I  +  D+C  +++  +  ++   +   + +L+
Sbjct: 155 NGKIVEHYKDKCLRINAEGAVDAIFDQVSQALDKLL 190


>gi|94984209|ref|YP_603573.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300]
 gi|94554490|gb|ABF44404.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300]
          Length = 207

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 22/164 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++  G  G+GK+T   +L      +         P         R       V     
Sbjct: 1   MYLALSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYRDMRRYSFHSQVYFLSR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDS--- 119
             E          H+ N++  A    + ++ DR  F D++   +   +S Q    D    
Sbjct: 61  RLE---------QHL-NLVTGA----RYVIQDRTVFEDANIFARNLFESGQMEARDWATY 106

Query: 120 --LQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             L +  +  +  PD  I +D  V    KR+  R    E A  D
Sbjct: 107 LGLYQGILPALRVPDLLIHIDASVPTLKKRIAQRGRAYEKAIPD 150


>gi|157138694|ref|XP_001657341.1| thymidine kinase [Aedes aegypti]
 gi|108869443|gb|EAT33668.1| thymidine kinase [Aedes aegypti]
          Length = 248

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 68/204 (33%), Gaps = 20/204 (9%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64
            EG  G+GKTT ++      ++    V +  EP          ++L              
Sbjct: 22  IEGNIGSGKTTFLN----HFEKFKDRVCLLTEPVEKWRDCGGVNLLDLMYKEPHRWAMPF 77

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDSLQE 122
           +    +       H     +   +  + +   R+  +++  A         ++  +  + 
Sbjct: 78  QTYVTLTMLNM--HTYQTDKSVKLMERSMFSARYCFVENMLASGSLHQGMYNILQEWYEF 135

Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--RRQIFLD 179
           I     +  D  + L    +I  +R++ R    ES     + ++   +HE       F  
Sbjct: 136 IHANIHIQADLIVYLRTSPEIVYERMKKRARSEESCVPLKYLQELHELHENWLIHGTFPR 195

Query: 180 IARNQPDRCHIVDSAHSFQSVATN 203
           +A   P    ++D+     ++++ 
Sbjct: 196 VA---P--VLVLDADLDLHNISSE 214


>gi|229005889|ref|ZP_04163583.1| hypothetical protein bmyco0002_28130 [Bacillus mycoides Rock1-4]
 gi|228755353|gb|EEM04704.1| hypothetical protein bmyco0002_28130 [Bacillus mycoides Rock1-4]
          Length = 182

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 47/186 (25%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GKTT    L R L++  + +     P G    E  +++ L     E         F   
Sbjct: 3   SGKTT----LARRLEKHGFPILY-ENPYG--IVEKRKNLNLDIYTKEG--------FITN 47

Query: 75  RLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHLFLDSLQEI 123
           +   +E  I+      G+I++ DR          +         + ++     L  L+  
Sbjct: 48  QRMFIEAKIKEIQNARGRIVIFDRGSEDIEFYTIYFPKLIGMDWDIENELKDELYKLRRC 107

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                  D    LD+   I  +R +N  + R S     FE++            L++A  
Sbjct: 108 HS-----DAIFYLDVSKKILQERKKNDNTRRRST----FEKQ------------LELAEI 146

Query: 184 QPDRCH 189
           +     
Sbjct: 147 EKQWYK 152


>gi|330815623|ref|YP_004359328.1| Deoxynucleoside kinase family protein [Burkholderia gladioli BSR3]
 gi|327368016|gb|AEA59372.1| Deoxynucleoside kinase family protein [Burkholderia gladioli BSR3]
          Length = 227

 Score = 45.8 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 15/161 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG  G GKT+  +L+      +     +   P   P  E               A
Sbjct: 18  RYIAIEGPIGVGKTSLAALIAERWAMR----PLLERPQDNPFLE---RFYREGARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121
           +    +  A +       +  A   G  ++ D ++   +  +A     D    L+    +
Sbjct: 71  Q----LSFALQRAQQAQELAAAQAAGLAIVAD-YMPQKNEIFARLTLGDDEWQLYRALAE 125

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            + V    PD  + L    ++   R+Q R    E    D +
Sbjct: 126 RVDVPAPAPDLVVYLQASPEVLYARIQKRGIAMELQIGDAY 166


>gi|228916283|ref|ZP_04079853.1| hypothetical protein bthur0012_34990 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228947267|ref|ZP_04109561.1| hypothetical protein bthur0007_33970 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229092627|ref|ZP_04223778.1| hypothetical protein bcere0021_33890 [Bacillus cereus Rock3-42]
 gi|228690780|gb|EEL44556.1| hypothetical protein bcere0021_33890 [Bacillus cereus Rock3-42]
 gi|228812514|gb|EEM58841.1| hypothetical protein bthur0007_33970 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228843481|gb|EEM88559.1| hypothetical protein bthur0012_34990 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 195

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 8   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 57  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154


>gi|261337840|ref|ZP_05965724.1| deoxynucleoside kinase family protein [Bifidobacterium gallicum DSM
           20093]
 gi|270277306|gb|EFA23160.1| deoxynucleoside kinase family protein [Bifidobacterium gallicum DSM
           20093]
          Length = 210

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 43/221 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK++   ++         DV         P  +                +  A +   
Sbjct: 9   GAGKSSLAGIVGSHY---GTDVFYES-VDDNPVLDLYYK----------DPKKYAFLLQI 54

Query: 74  ARLDHVENVIRPALMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLDSLQEIS-- 124
             L+     I+ A      +L DR       FLD +        + QH++ + L  +   
Sbjct: 55  HFLNKRFESIKKAYKHNNNVL-DRSIFEDALFLDLNVINGNVTRTEQHIYHELLNNMMEE 113

Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH--EKRRQIFLD 179
              + +  PD  I +D+  +  L+R++ R    E       E    + H  ++    +  
Sbjct: 114 LEGMPKKAPDLLIYIDVSFEKMLERIKKRGRTFEQ-----IENDPSLYHYYQQVHDAYPR 168

Query: 180 IARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211
                          D    V+   +   V   I + + +L
Sbjct: 169 WFDEYHMSPKIRIDGDTYDFVNDDAAADHVLAQIDDALRDL 209


>gi|259089145|ref|NP_001158610.1| deoxycytidine kinase [Oncorhynchus mykiss]
 gi|225705244|gb|ACO08468.1| Deoxycytidine kinase [Oncorhynchus mykiss]
          Length = 263

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 67/194 (34%), Gaps = 34/194 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------A 46
           M+    IS EG   AGK+T + LL+   Q K+++V    EP                   
Sbjct: 18  MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVP--EPIARWCNVQTQHSEFEELTM 73

Query: 47  AEAARHVLLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCD 96
           ++ +   +L    ++    A      A     R        +    E  +      +  D
Sbjct: 74  SQKSGSNVLQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREAENPVQFFERSVYSD 133

Query: 97  RFLDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           R++ ++  Y+ E  +     +       L +   + +  D  I L    +  ++R+  R 
Sbjct: 134 RYIFAANLYESECLNETEWSIYQDWHGWLHKQFGKHIELDGIIYLRAAPERCMERLHRRG 193

Query: 152 SLRESA-CLDYFER 164
              E    L+Y E+
Sbjct: 194 REEEQGIPLEYLEK 207


>gi|229493096|ref|ZP_04386891.1| uridine kinase [Rhodococcus erythropolis SK121]
 gi|229320126|gb|EEN85952.1| uridine kinase [Rhodococcus erythropolis SK121]
          Length = 207

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 25/153 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ +G++G+GKTT    L   L  +   V    +    P     R   LS       +  
Sbjct: 23  VAIDGVDGSGKTTFTKSLAAQLNERRVIVIHV-DDFLNPPEIRHRRGRLSPEGFWLDSY- 80

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDS----SQHLFLDS 119
                     D +E  +   L  G     DR       S AY    D      + LFL  
Sbjct: 81  --------DYDALERHVLAPLKPGG----DREYRPRRDSDAYLHAADGAVVLVEGLFLHR 128

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
             E + +    D +I LD+P +I  +R+  R  
Sbjct: 129 -DEFASRW---DYSIFLDVPFEITAERMNLRDG 157


>gi|30686829|ref|NP_194258.2| adenylate kinase family protein [Arabidopsis thaliana]
 gi|38603926|gb|AAR24708.1| At4g25280 [Arabidopsis thaliana]
 gi|44681436|gb|AAS47658.1| At4g25280 [Arabidopsis thaliana]
          Length = 249

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 50/215 (23%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPG-GTPAAEAARHVLLSCGVDE 61
           FI+F  G  G+GK T    +      ++      + RE    T       +++    +  
Sbjct: 44  FITFVLGGPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVP 103

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                          +    +I+  L        D            +            
Sbjct: 104 --------------SEVTVKLIQKELES-----SD----------NRKFLIDGFPRTEEN 134

Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            ++ + ++   PD  +  D P +  +KRV NR   R           ++   +KR +IF 
Sbjct: 135 RVAFERIIRADPDVVLFFDCPEEEMVKRVLNRNQGRIDD--------NITTMKKRLKIFN 186

Query: 179 DIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
            + R          + + +++  +   +  ++L I
Sbjct: 187 ALNRPVIDYYKNKGKLYTINAVGTVDDIFQHVLPI 221


>gi|33862095|ref|NP_893656.1| adenylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|46396096|sp|Q7UZW3|KAD_PROMP RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|33634313|emb|CAE19998.1| Adenylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 184

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 43/214 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M   L   F G  GAGK T  +LL     +L     ++        T   +  + ++   
Sbjct: 1   MKKHLL--FLGPPGAGKGTQAALLSAANSYLHLSTGELLRKEIDLDTDLGKQVKDIM--N 56

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHL 115
             +                  V  +++  L +     +L D +                 
Sbjct: 57  RGELVSD------------QLVLEIVKKNLDKDNNGWIL-DGY------------PRNLS 91

Query: 116 FLDSLQEISVQEVMP-DCTIILDLPVDIGLKR--VQNRYSLRESACLDYFERKDVMIHEK 172
            ++SL ++ +    P +    LD+P ++ +KR  ++ R    E        +      E 
Sbjct: 92  QVNSLNDVLININQPLEIVFYLDIPDEVLIKRLLIRGRKDDNEKTIKTRL-KIYKETTEP 150

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
             + + D+A  +      + +    ++++ +I  
Sbjct: 151 LIEYYKDLALLEN-----IKADGDLKTISADIKQ 179


>gi|188996218|ref|YP_001930469.1| Nucleoside-triphosphate--adenylate kinase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931285|gb|ACD65915.1| Nucleoside-triphosphate--adenylate kinase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 211

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 53/233 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I F G  GAGK T   LLK    R  +    T         +  R  + +    E G 
Sbjct: 3   KIIIFLGPPGAGKGTQSQLLKE---RNGFIQIST--------GDLLREAVKNQ--TELGK 49

Query: 65  EAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS-L 120
            A+  +     +  D + ++I+  L E        + D +  + G   +      LD+ L
Sbjct: 50  LAKQYMDEGKLVPDDLIISLIKEKLQE--------YADKNIIFDGFPRTIPQAESLDNLL 101

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL------------------DYF 162
             ++      D  I+  +  D  +KR+  R        +                     
Sbjct: 102 SHLNKNV---DAVILFKIEDDEVVKRLAGRRVCPSCGAVYHMIYNPPKTDEICDKCGARL 158

Query: 163 ERKDVMIHEKRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIV 208
            ++D    E  R   +++      +     ++   +D+  + +++   I +++
Sbjct: 159 IQRDDDKEEVIRKRLEVYHQQTKPLIEYYKNKIVEIDATDNPKNIYNKIASMI 211


>gi|317505365|ref|ZP_07963293.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315663579|gb|EFV03318.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 361

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 6/102 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   AGKTT +  +        Y V    E     +     ++  +  +   G +A
Sbjct: 7   IVLTGGPCAGKTTALVKIIEHFSSLGYKVFTIPEVPTMFSQSGMDYLTTNKNLFYEGEKA 66

Query: 67  --EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             E  +    +  H+         E  +++CDR      AY 
Sbjct: 67  TLEIQLSLEDKFLHMAE----QCEEPALIVCDRGAMDISAYM 104


>gi|292654298|ref|YP_003534195.1| signal recognition particle receptor SRalpha [Haloferax volcanii
           DS2]
 gi|33518607|gb|AAO73354.1| signal recognition particle receptor-like protein [Haloferax
           volcanii]
 gi|291372798|gb|ADE05025.1| signal recognition particle receptor SRalpha [Haloferax volcanii
           DS2]
          Length = 456

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 19/145 (13%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67
           F GI G GKTT I+ L ++ +++ Y   +         A E  R        +    +  
Sbjct: 263 FTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIRE-----HAEALDKKLI 317

Query: 68  AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           A          + + +  A      I+L D            R  + +  +  L++I  +
Sbjct: 318 AHEQGGDPAAVIYDGVEYAEAHDIDIVLGD---------TAGRLHTSNDLMAQLEKID-R 367

Query: 127 EVMPDCTIILD--LPVDIGLKRVQN 149
            V PD T+ +D  +     ++R + 
Sbjct: 368 VVGPDLTLFVDEAVAGQDAVERARQ 392


>gi|18411518|ref|NP_567093.1| uridylate kinase, putative / uridine monophosphate kinase, putative
           / UMP kinase, putative [Arabidopsis thaliana]
 gi|30695141|ref|NP_850726.1| uridylate kinase, putative / uridine monophosphate kinase, putative
           / UMP kinase, putative [Arabidopsis thaliana]
 gi|18252847|gb|AAL62350.1| uridylate kinase-like protein [Arabidopsis thaliana]
 gi|21389695|gb|AAM48046.1| uridylate kinase-like protein [Arabidopsis thaliana]
          Length = 204

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 61/213 (28%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + + +                   A +  R  + S              
Sbjct: 28  GGPGSGKGTQCANVVKHFS-----------YTHFSAGDLLRAEIKSGSE----------- 65

Query: 71  FAAARLDHVENVIRPALMEGKIL--------LC--------DRFLDSSYAYQGERDSSQH 114
           F A         I+  + EG+I+        LC        D+FL   +     R+    
Sbjct: 66  FGAM--------IQSMIAEGRIVPSEITVKLLCKAMEESGNDKFLIDGF----PRNEENR 113

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              +++  I      P   +  D P +   +R+ +R   RE   ++  +++  +  E   
Sbjct: 114 NVFENVARI-----EPAFVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVEST- 167

Query: 175 QIFLDIAR--NQPDRCHIVDSAHSFQSVATNIL 205
              L I        +   +++A S + V   + 
Sbjct: 168 ---LPIISYYESKGKLRKINAAKSSEEVFEAVR 197


>gi|289644162|ref|ZP_06476254.1| adenylate kinase [Frankia symbiont of Datisca glomerata]
 gi|289506012|gb|EFD27019.1| adenylate kinase [Frankia symbiont of Datisca glomerata]
          Length = 214

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 68/237 (28%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDE 61
            F+   G++G+GK T   +L   L   +  V  + R      T      + ++ S  +  
Sbjct: 3   KFVVM-GVQGSGKGTQAKMLADDLDLVHISVGDIFRWNVQSHTKLGAQVKRIVASGHLVG 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                          D VE+V+R  L            +  +   G   +++      L+
Sbjct: 62  D--------------DLVESVVRDRLASHDW-------NYGFVIDGFPRNARQAEF-FLE 99

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS----------------------------- 152
              +        I LDLP +   +RV  R                               
Sbjct: 100 SYDIDG-----VIYLDLPDEEVYRRVLARRLCSRCGLDYNLIASRPRVADTCDVCGGQLL 154

Query: 153 LRESACLDYFERKDVMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
            R     +  E +    H + R   +IF        +   ++D+      V + I  
Sbjct: 155 TRSDDNPEALEVRLREYHARTRPVMEIFQR-----KEYVAVIDARRPAVDVQSEIRE 206


>gi|157138696|ref|XP_001657342.1| thymidine kinase [Aedes aegypti]
 gi|108869444|gb|EAT33669.1| thymidine kinase [Aedes aegypti]
          Length = 261

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 68/204 (33%), Gaps = 20/204 (9%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64
            EG  G+GKTT ++      ++    V +  EP          ++L              
Sbjct: 35  IEGNIGSGKTTFLN----HFEKFKDRVCLLTEPVEKWRDCGGVNLLDLMYKEPHRWAMPF 90

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDSLQE 122
           +    +       H     +   +  + +   R+  +++  A         ++  +  + 
Sbjct: 91  QTYVTLTMLNM--HTYQTDKSVKLMERSMFSARYCFVENMLASGSLHQGMYNILQEWYEF 148

Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--RRQIFLD 179
           I     +  D  + L    +I  +R++ R    ES     + ++   +HE       F  
Sbjct: 149 IHANIHIQADLIVYLRTSPEIVYERMKKRARSEESCVPLKYLQELHELHENWLIHGTFPR 208

Query: 180 IARNQPDRCHIVDSAHSFQSVATN 203
           +A   P    ++D+     ++++ 
Sbjct: 209 VA---P--VLVLDADLDLHNISSE 227


>gi|293449333|ref|ZP_06663754.1| ATP-binding protein yghR [Escherichia coli B088]
 gi|291322423|gb|EFE61852.1| ATP-binding protein yghR [Escherichia coli B088]
          Length = 252

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 52/236 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  DY E +D +         +        +   +DS+  +  V       V
Sbjct: 194 ---KPDHDYAELQDKI-------GVMSTIGYNGTKILEIDSSAPYSEVLEQAQKAV 239


>gi|326804113|ref|YP_004321931.1| deoxyguanosine kinase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651346|gb|AEA01529.1| deoxyguanosine kinase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 209

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 53/168 (31%), Gaps = 31/168 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  GAGK+T+   L  +L      V    EP                    F  + 
Sbjct: 2   IVFAGTIGAGKSTYAGKLAEYL---GTKVFY--EP--VEENPILDKYYQDPKKYAFSLQI 54

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY------------QGERDSS 112
             +          +N I+ A  +   +L DR  + D  + Y                   
Sbjct: 55  YFL------NQRFKN-IKAAFFDNNNVL-DRSIYEDELFTYLNVLNGNISEEEFAIYRDL 106

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
               ++ L  +  +   PD  + LD  +D  +K ++ R  + E    D
Sbjct: 107 LANMMEELDSLPKKA--PDLLVFLDSSLDNAVKNIKKRGRVYEQPSSD 152


>gi|301598428|pdb|3ADB|A Chain A, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed
           With Selenocysteine Trna And Amppnp (Crystal Type 1)
 gi|301598429|pdb|3ADB|B Chain B, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed
           With Selenocysteine Trna And Amppnp (Crystal Type 1)
 gi|301598432|pdb|3ADC|A Chain A, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed
           With Selenocysteine Trna And Amppnp (Crystal Type 2)
 gi|301598433|pdb|3ADC|B Chain B, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed
           With Selenocysteine Trna And Amppnp (Crystal Type 2)
 gi|301598436|pdb|3ADD|A Chain A, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed
           With Selenocysteine Trna And Amppnp (Crystal Type 3)
 gi|301598437|pdb|3ADD|B Chain B, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed
           With Selenocysteine Trna And Amppnp (Crystal Type 3)
          Length = 259

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 51/210 (24%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDEF 62
            I   G+ G GK+T    L + L + N DV V         ++  R    V      +  
Sbjct: 13  LIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEFI 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 ++ +A              ++   ++ D   D++Y Y   R    ++     + 
Sbjct: 66  KKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSXRRDLINIAKKYNKN 107

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            ++        I L   +D+ ++R   R            E+    + +K  + F +  +
Sbjct: 108 YAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKXYEKFDEPGK 148

Query: 183 NQP--DRCHIVDSAHSFQSVATNILNIVWE 210
                +   I+D+          I   + E
Sbjct: 149 KYKWDEPFLIIDTTKDID--FNEIAKKLIE 176


>gi|194694232|gb|ACF81200.1| unknown [Zea mays]
          Length = 212

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 63/216 (29%), Gaps = 63/216 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 32  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71

Query: 71  FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114
                      +I   + EGKI+                  D+FL   +      +    
Sbjct: 72  ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKSENDKFLIDGF----PGNEENR 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
              +++ +IS     P   +  D   +   KR+  R   R    ++  +++     +   
Sbjct: 118 AAFENVTKIS-----PAFVLFFDCSEEDMEKRLLGRNQGRVDDNIETIKKRFKTFVDSTL 172

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
              + +     N  D+   +D+A     V  ++  I
Sbjct: 173 PVIEHY-----NSKDKVKKIDAAKPIPEVFEDVKAI 203


>gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205]
          Length = 207

 Score = 45.8 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 48/209 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L  +  D   + E     A  +   +  S G   F A   A++   
Sbjct: 24  GSGKSSVGRHLAEALDYRFLDADTSLE---QVAGRSIPEIFASEGETGFRALESAVLNQI 80

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
           A                          S     G    +Q      L +           
Sbjct: 81  A-----------------------SWHSLVVATGGGVVTQPANWGELHQGV--------V 109

Query: 134 IILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKR---RQIFLDIARNQPDRCH 189
           I LD P  I L R++   + R      D  ER   ++ E+R    Q  L I ++      
Sbjct: 110 IWLDAPDAILLARLEADPTPRPLMEAEDRAERLASLMAERRPLYAQADLQILQD------ 163

Query: 190 IVDSAHSFQSVATNILNIVWELVQKRVSP 218
                   + V   IL  +  ++++R +P
Sbjct: 164 ----GRPAEQVVQQILEALPSIIKERKAP 188


>gi|323705511|ref|ZP_08117086.1| guanylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535413|gb|EGB25189.1| guanylate kinase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 205

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 49/219 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N GL I   G  GAGK T    L +  +     +   TR+P      E          V+
Sbjct: 5   NKGLLIVISGPSGAGKGTVCKALLKKDENLKLSISMTTRKP---RNGEVDGENYFFTTVE 61

Query: 61  EFGAEAEA--IVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +F    E+  ++  A   D+     +  ++  + EG  ++                    
Sbjct: 62  KFKTLIESNMLLEWAKVYDNYYGTPKEFVQKNIDEGHDVI-------------------- 101

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER--KDVMIH 170
           L +D    + V++  P+   +  LP   +    R++ R +  E   L  F+   +++   
Sbjct: 102 LEIDIQGALKVKDKYPEGVFVFILPPSMEELKNRIKKRGTETEEEILKRFKSAYEEINFV 161

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +                 +++           IL I+ 
Sbjct: 162 SRY-------------NYVVIN--DDVDLAVDKILAIIK 185


>gi|242072152|ref|XP_002446012.1| hypothetical protein SORBIDRAFT_06g000495 [Sorghum bicolor]
 gi|241937195|gb|EES10340.1| hypothetical protein SORBIDRAFT_06g000495 [Sorghum bicolor]
          Length = 250

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 44/216 (20%)

Query: 6   FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI+F  G  G+GK T  + +        L   +   H      G+   E    ++    +
Sbjct: 67  FIAFVLGGPGSGKGTQCTKIASDFGFAHLSAGDLLRHEIA--SGSEKGELILDIIKEGRI 124

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                            +    +IR A+     K +L D F                   
Sbjct: 125 VP--------------SEITVELIRKAMETKNAKRVLIDGFPRC------------EENR 158

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            + ++I      PD  I  D P D  +KR+  R   R    ++   +K + + E      
Sbjct: 159 IAFEKIV--GTEPDIVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLN--- 212

Query: 178 LDIARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211
           L +      R   H +++  +   +   +  +   L
Sbjct: 213 LPVVDYYSSRGKVHKINATGTADEIFEAVRRLFSSL 248


>gi|325968577|ref|YP_004244769.1| hypothetical protein VMUT_1060 [Vulcanisaeta moutnovskia 768-28]
 gi|323707780|gb|ADY01267.1| hypothetical protein VMUT_1060 [Vulcanisaeta moutnovskia 768-28]
          Length = 237

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 62/210 (29%), Gaps = 38/210 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--------------------- 43
             I   G EGAGK+++  L+K +L +         +PGG                     
Sbjct: 3   KLIYLVGPEGAGKSSNARLIKYYLTKYYGRCVAVPKPGGEIRSRNLFVDVLARFLMRVGR 62

Query: 44  -----TPAAEAARHV--LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                 P  +  R V  +L   +       E + F  A   +   VI   L  G  ++  
Sbjct: 63  VEYDYRPEGKLMRKVDSVLMSRIHGLWIFIELLGFLTA---YFVKVIAVQLF-GCDVVLT 118

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP----DCTIILDLPVDIGLKR--VQNR 150
           RF+                    +  ++   + P    D  I LD    +  KR  +  R
Sbjct: 119 RFIIDFLTDMFLLSRRAGKSFRLVSTLTYVFLRPMFGVDLIIYLDADYSVLRKRYYIAKR 178

Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +     +         +     + + D+
Sbjct: 179 DMIEPPWRIARIRVISRALFNMISKYYDDL 208


>gi|37780424|gb|AAO64438.1| deoxycytidine kinase 2 [Danio rerio]
 gi|63101770|gb|AAH95077.1| Zgc:110540 protein [Danio rerio]
 gi|157423304|gb|AAI53550.1| Zgc:110540 [Danio rerio]
 gi|213627444|gb|AAI71341.1| Zgc:110540 [Danio rerio]
 gi|213627446|gb|AAI71343.1| Zgc:110540 [Danio rerio]
          Length = 264

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 32/192 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR---------KNYDVHVTR-EPGGTPAAEAAR 51
              + +S EG   AGK+T + LL+R  +          K  +V  T  E      ++ + 
Sbjct: 20  KRAMKVSIEGNIAAGKSTFVRLLERASEEWEVIPEPIGKWCNVQTTENEYEELSTSQKSG 79

Query: 52  HVLLSCGVDEFGAEAEAIVFAA-------------ARLDHVENVIRPALMEGKILLCDRF 98
             LL    D+    +      A             A+L   E  ++        +  DR+
Sbjct: 80  GNLLQMLYDKPSRWSYTFQTYACLSRVRSQLQPPSAKLQQAEKPVQFFERS---VYSDRY 136

Query: 99  LDSSYAYQGERDSSQHLFL--DSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSL 153
           + +S  ++    +     +  D    +  Q    +  D  I L    +  ++R+Q R   
Sbjct: 137 VFASNLFESGDLNETEWAIYQDWHSWLLTQFESQIELDAMIYLRADPERCMQRLQFRGRE 196

Query: 154 RESA-CLDYFER 164
            E    LDY E+
Sbjct: 197 EEQGIPLDYLEK 208


>gi|225705382|gb|ACO08537.1| Deoxycytidine kinase [Oncorhynchus mykiss]
          Length = 263

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 67/194 (34%), Gaps = 34/194 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------A 46
           M+    IS EG   AGK+T + LL+   Q K+++V    EP                   
Sbjct: 18  MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVP--EPIARWCNVQTQRSEFEELTM 73

Query: 47  AEAARHVLLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCD 96
           ++ +   +L    ++    A      A     R        +    E  +      +  D
Sbjct: 74  SQKSGSNVLQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREAENPVQFFERSVYSD 133

Query: 97  RFLDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           R++ ++  Y+ E  +     +       L +   + +  D  I L    +  ++R+  R 
Sbjct: 134 RYIFAANLYESECLNETEWSIYQDWHGWLHKQFGKHIELDGIIYLRAAPERCMERLHRRG 193

Query: 152 SLRESA-CLDYFER 164
              E    L+Y E+
Sbjct: 194 REEEQGIPLEYLEK 207


>gi|196036728|ref|ZP_03104120.1| hypothetical protein BCW_2472 [Bacillus cereus W]
 gi|228915140|ref|ZP_04078737.1| uridine kinase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228946193|ref|ZP_04108526.1| uridine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229122094|ref|ZP_04251310.1| uridine kinase [Bacillus cereus 95/8201]
 gi|195990692|gb|EDX54668.1| hypothetical protein BCW_2472 [Bacillus cereus W]
 gi|228661437|gb|EEL17061.1| uridine kinase [Bacillus cereus 95/8201]
 gi|228813484|gb|EEM59772.1| uridine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228844569|gb|EEM89623.1| uridine kinase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 198

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 70/220 (31%), Gaps = 55/220 (25%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56
           MN     I+   + G GKTT    L   L      ++  R       T   +        
Sbjct: 13  MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 65

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D    +   +      + H+   I+ + ++  I+      D  +AY           
Sbjct: 66  --DDGANYDEWVLTPLIKDIQHL---IQDSNVDYIIV------DYPFAY----------- 103

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R   R         D+ E     IH      
Sbjct: 104 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHY 149

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208
               R+ +L+     +P+   ++D A S   +   I   +
Sbjct: 150 INYARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEEL 189


>gi|94268733|ref|ZP_01291271.1| Guanylate kinase [delta proteobacterium MLMS-1]
 gi|93451489|gb|EAT02320.1| Guanylate kinase [delta proteobacterium MLMS-1]
          Length = 210

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 69/233 (29%), Gaps = 47/233 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G         GAGKTT +  +     R  + + H TR P          H +     
Sbjct: 1   MSRGCLFVVSAPSGAGKTTLLKKILATTPRAGFSISHTTRPPRAGEQDGVDYHFVDRDAF 60

Query: 60  DEFGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           D      + +         +  +R       I  AL  G+ +  D  +D   A Q     
Sbjct: 61  DRMRRRGDFLEAAEVHGNFYGTSRAA-----IEAALARGEDIFLD--VDVQGARQ----- 108

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMI 169
                +  L EI+          +   P    +  +R++ R +  E+      E     +
Sbjct: 109 -----IRDLAEIAA-------VFLFIAPPSAAILEQRLRGRDTDDEATIALRLENARREM 156

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            E              D   I D     + +   I  IV E  ++R  P    
Sbjct: 157 EE----------AAWYDYLVINDQLRQAEELLAAI--IVAERCRRRRWPDGEP 197


>gi|326517860|dbj|BAK07182.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 240

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 65/210 (30%), Gaps = 43/210 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T  + +        +       + RE     T      ++++    +     
Sbjct: 28  GGPGSGKGTQCAKIVSQF---GFTHLSAGDLLREEVKSDTEQGTMIKNLMHEGKLVPSEI 84

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++             +  L  G     D+FL   +    E   +    ++      
Sbjct: 85  IVRLLL-------------KAMLASGN----DKFLIDGFPRDEENREAYEKIIN------ 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181
              + P+  +++D   +   +R+ +R   R+   ++   ++  +  +      Q +  + 
Sbjct: 122 ---IEPEFVLLIDCSREEMERRILHRNQGRDDDNMETIRQRFEVFQQSTLPVIQHYEKM- 177

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                +   VD       V  ++  I  +L
Sbjct: 178 ----GKLRRVDGTRQPDMVFEDVKVIFAQL 203


>gi|16903158|gb|AAL30433.1|AF439264_1 FtsY NG domain [Haloferax volcanii]
          Length = 266

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 19/145 (13%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67
           F GI G GKTT I+ L ++ +++ Y   +         A E  R        +    +  
Sbjct: 73  FTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIRE-----HAEALDKKLI 127

Query: 68  AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           A          + + +  A      I+L D            R  + +  +  L++I  +
Sbjct: 128 AHEQGGDPAAVIYDGVEYAEAHDIDIVLGD---------TAGRLHTSNDLMAQLEKID-R 177

Query: 127 EVMPDCTIILD--LPVDIGLKRVQN 149
            V PD T+ +D  +     ++R + 
Sbjct: 178 VVGPDLTLFVDEAVAGQDAVERARQ 202


>gi|325678984|ref|ZP_08158582.1| uridine kinase family protein [Ruminococcus albus 8]
 gi|324109488|gb|EGC03706.1| uridine kinase family protein [Ruminococcus albus 8]
          Length = 204

 Score = 45.4 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 21/178 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66
            +G+ GAGK+T    ++  L+     V +               ++   +   +    E 
Sbjct: 25  IDGLGGAGKSTIAEEVRTELEAAGVHVVLLH----------IDDLITPRAVRYNNNFPEW 74

Query: 67  EAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYA--YQGERDSSQHLFLDSLQ 121
           E       R D+    +   L +G   +I L D+  DS     Y     +        LQ
Sbjct: 75  ECYYVLQWRYDYFTEKLE-ILKKGGKTEIELYDKDNDSYITEEYSTAGRTVILTEGIFLQ 133

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              +     D T+ +DLP +I L+RV  ++RY   +      +E +      +  + +
Sbjct: 134 RKELDGSF-DLTVYIDLPENIRLERVLCRDRYIGNDEEIRAKYEGRYFPAERRYVEEY 190


>gi|58038834|ref|YP_190798.1| adenylate kinase [Gluconobacter oxydans 621H]
 gi|58001248|gb|AAW60142.1| Adenylate kinase [Gluconobacter oxydans 621H]
          Length = 193

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 71/220 (32%), Gaps = 47/220 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  GAGK T    L+    L++ +    +  E     A       ++  G      
Sbjct: 3   IILLGPPGAGKGTQAKRLEALYGLKQISTGDMLRAEVAAGSAIGNEAKAIMEKGQFVPDP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++           + +P    G   + D F          R  SQ   LD++  +S
Sbjct: 63  IIVAMI--------QNRIAQPDCERGF--ILDGF---------PRTESQAEALDTM--LS 101

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-------- 176
            + +  D  I+LD+  +  ++R+ +R     +   D  +  DV      R          
Sbjct: 102 ARGLTIDAVILLDVNEEKLVERIASRCGEDGTRRPD--DNPDV-----VRARLDVYRKQT 154

Query: 177 -----FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                + + A     R   VD     +SV   I  IV   
Sbjct: 155 APILPYYERA----GRLLHVDGMKDVESVGKEIDAIVAAA 190


>gi|313124770|ref|YP_004035029.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312281333|gb|ADQ62052.1| Deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 215

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 52/171 (30%), Gaps = 37/171 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L + L                   E   + +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAKHL------------GSTAYYEEVNNNPVLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111
             +          E  I  A      +L DR            +D+  A    YQ     
Sbjct: 53  FLLNTYFLNKRLAE--INAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY--- 106

Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             H  +D++ E         PD  I + + +D  LKR+  R    E    D
Sbjct: 107 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRGRKFEQLDSD 155


>gi|115350718|ref|YP_772557.1| adenylyl-sulfate kinase [Burkholderia ambifaria AMMD]
 gi|123322713|sp|Q0BI00|CYSC_BURCM RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
          AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|115280706|gb|ABI86223.1| adenylylsulfate kinase [Burkholderia ambifaria AMMD]
          Length = 181

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 22/100 (22%)

Query: 1  MNSGL-FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
          M     F+    G+ GAGK+T  +LLK+ L  +                   R  LL   
Sbjct: 1  MKQKKVFVVWLTGVSGAGKSTLANLLKQQLDARG-----------------LRTYLLDGD 43

Query: 59 VDEFGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
              G   +     A R +++     V R  +  G I++ 
Sbjct: 44 TLRNGLNQDLGFSDADRRENIRRTAEVARLMMDAGFIVIA 83


>gi|325685065|gb|EGD27200.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 220

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 53/171 (30%), Gaps = 37/171 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L + L       +   E    P        +L     +     
Sbjct: 10  IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 57

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111
             +          E  I  A      +L DR            +D+  A    YQ     
Sbjct: 58  FLLNTYFLNKRLAE--INAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY--- 111

Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             H  +D++ E         PD  I + + +D  LKR+  R    E    D
Sbjct: 112 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRGREFEQLDSD 160


>gi|316968511|gb|EFV52782.1| thymidylate kinase [Trichinella spiralis]
          Length = 118

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 13/87 (14%)

Query: 101 SSYAYQGERDSS---QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
           +   ++G   S    Q L  D           PD    +D+  +     ++NR       
Sbjct: 7   ALIVFEGLDRSGKTTQGLDFDWCMNADRGLPQPDVVFFVDVKPET----LKNRGEF---- 58

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQ 184
            ++ F+ +      K R  +  +    
Sbjct: 59  GVERFDDE--EFQRKVRHNYQRLTDKY 83



 Score = 41.9 bits (98), Expect = 0.065,   Method: Composition-based stats.
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 3  SGLFISFEGIEGAGKTTH 20
           G  I FEG++ +GKTT 
Sbjct: 5  RGALIVFEGLDRSGKTTQ 22


>gi|61200776|gb|AAX39813.1| thymidine kinase [Bohle iridovirus]
          Length = 195

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  GAGK+T +      L+   Y+V        +   +     L      +F ++ 
Sbjct: 7   IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAY------QGERDSSQHLFLDS 119
           + ++  +        + R A     ++++ +R  +    +      QG+   ++H  L  
Sbjct: 60  KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCDVAMEQGQILPAEHDMLVQ 112

Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + E      +P D  I L+ P +  ++R+  R    E           V         F 
Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERGIP-------VEYLSSLHSKF- 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                 PD         S + V  N + ++ ++V + V
Sbjct: 162 ---ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194


>gi|225716338|gb|ACO14015.1| UMP-CMP kinase [Esox lucius]
          Length = 219

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 62/211 (29%), Gaps = 37/211 (17%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  + +        L      +   R   G+   +     +    +      
Sbjct: 33  GGPGAGKGTQCAKIVENYSYTHLSA-GDLLRAERNREGSEFGQLIDSYIKEGNIVPVEIT 91

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + +  A      ++      L++G      R  D+   +    D    +          
Sbjct: 92  IKLLRKAMEETMQIDEKKFRFLIDGFP----RNEDNFKGWTSVMDGKADVKF-------- 139

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182
                   +  D   ++ + R   R      +  +    + +    KR Q FL   R   
Sbjct: 140 -------VLFFDCSNEVCIDRCLERGKSSGRSDGNR---ESL---RKRIQTFLQSTRPIV 186

Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIVWE 210
               +  + H VD++ S   V  ++  I+ +
Sbjct: 187 SLYEKQGKVHTVDASRSVDEVFADVKAILDK 217


>gi|91080861|ref|XP_971851.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 42 kda subunit
           [Tribolium castaneum]
 gi|270006430|gb|EFA02878.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Tribolium
           castaneum]
          Length = 403

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 25/177 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA-----------AE 48
             +  EG   AGK+     L   L        N D+    + G               + 
Sbjct: 72  KIVVVEGPVAAGKSKFAKELAEELDMLYMPEANLDMVYINDYGYDLRQLDEQLPESCRSF 131

Query: 49  AARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105
             +  L +            ++    +     + +   L  G+ ++ DR   S + +   
Sbjct: 132 DVKDFLRTPKHR--NTATFQLMQYNTKYSQYIDALAHVLSTGQGVVLDRCCYSDFVFVEA 189

Query: 106 ---QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
              QG    + +     +++ ++ E+  P   I LD+PV+   + ++ R    E   
Sbjct: 190 MFSQGYLSKAAYKGYYEVRQNTINELLRPHLLIYLDVPVNKVQENIKKRALPFEKNT 246


>gi|212696418|ref|ZP_03304546.1| hypothetical protein ANHYDRO_00956 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676590|gb|EEB36197.1| hypothetical protein ANHYDRO_00956 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 51

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 25/49 (51%)

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++  +K  + ++D+++   D    +D+  S   V  N L+ +   ++++
Sbjct: 2   ILFTKKTYEGYIDLSKRFKDEIISIDANKSLDLVVNNCLDEIKTYLKEK 50


>gi|115502295|sp|Q0MQB6|NDUAA_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|111662245|gb|ABH12227.1| mitochondrial complex I subunit NDUFA10 [Gorilla gorilla]
          Length = 355

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|34557834|ref|NP_907649.1| shikimate kinase [Wolinella succinogenes DSM 1740]
 gi|34483552|emb|CAE10549.1| SHIKIMATE KINASE [Wolinella succinogenes]
          Length = 166

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 60/203 (29%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++   +L    +   +                     L    D      E +  A 
Sbjct: 16  GSGKSSVARILA---KESGH---------------------LWVDTDSLLELREGMSVAQ 51

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP--- 130
               H E   R AL                A+Q      + +       IS    MP   
Sbjct: 52  IFEQHKEEGFR-ALER------------ELAFQMRHSLQESI-------ISTGGGMPLFC 91

Query: 131 DC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           D         LDLP +  L+R+      +     D    K   +  +RR  +L +A    
Sbjct: 92  DLSSLGKLFFLDLPFEAILERLSKEERAKRPLLNDL--SKAKALFNQRRSSYLHLAN--- 146

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
              H + +  S   VA  IL+++
Sbjct: 147 ---HTLQADQSPLKVAQEILSLL 166


>gi|261822555|ref|YP_003260661.1| shikimate kinase II [Pectobacterium wasabiae WPP163]
 gi|261606568|gb|ACX89054.1| Shikimate kinase [Pectobacterium wasabiae WPP163]
          Length = 173

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 44/211 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  G GKTT    L + L    YD   T              V+   G  
Sbjct: 1   MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F                       AL +   +  +R++ ++    G            +
Sbjct: 56  GFRQRESL-----------------ALQQ---VTSNRYIVAT----GGGMVLAEANRRFM 91

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178
            +   Q +     I L    ++  +R++      +   L      +++      R+  + 
Sbjct: 92  HD---QGI----VIYLHANAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +A       H++D++ + +++  N+L  + 
Sbjct: 145 GVAH------HVIDASQTPEAIVANVLKALR 169


>gi|307565265|ref|ZP_07627758.1| deoxynucleoside kinase [Prevotella amnii CRIS 21A-A]
 gi|307345934|gb|EFN91278.1| deoxynucleoside kinase [Prevotella amnii CRIS 21A-A]
          Length = 204

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 36/201 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I+  G  G+GKTT   +L +   +L R                 +  + +        + 
Sbjct: 3   IAIAGNIGSGKTTLTKMLAKKYNWLPR------FESVDYNPYLEDYYKDL------KRWS 50

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHL 115
              E         D +E          K ++ DR +         ++YA     D     
Sbjct: 51  FPMEIFFLKERFKDLLE-----ISKCDKHVVQDRSIYEGVYVFTANNYAMGNLDDRDFET 105

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +++  ++++    +PD  I L   V   +  ++ R    E        +  +   E   +
Sbjct: 106 YMELFKDLTDVVKIPDLMIYLRSSVSHLVANIEKRGRSYEQ-------KMPLGYLENINK 158

Query: 176 IFLD-IARNQPDRCHIVDSAH 195
            + D I +    +  ++D+  
Sbjct: 159 RYDDFIMKKYKGKVLVIDADK 179


>gi|167754093|ref|ZP_02426220.1| hypothetical protein ALIPUT_02381 [Alistipes putredinis DSM 17216]
 gi|167658718|gb|EDS02848.1| hypothetical protein ALIPUT_02381 [Alistipes putredinis DSM 17216]
          Length = 192

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 70/215 (32%), Gaps = 34/215 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G GK T  + LK    +   D   T            R  +      + G E 
Sbjct: 4   IVLFGAPGCGKGTQAARLKE---KYGIDHVST--------GNVIREEI--ARGTKLGKEM 50

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           E+ +          V ++I   +   K     + D F  ++  +Q E            +
Sbjct: 51  ESYITTGRLAPDQVVIDMIADYIAAHKHAKGNIFDGFPRTT--HQAEEFD---------R 99

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +S Q +  D  I +D+P +  +KR+  R   +ES   D    + +    K       I 
Sbjct: 100 MLSEQGLKVDVMIYMDVPEEELVKRILLRG--KESGRADDASEEVIRDRIKVYHEQTAIV 157

Query: 182 RNQ---PDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +      +   ++   +   V   I  ++  + +
Sbjct: 158 ADFYAKQGKFADINGLGTMDEVFDRICQVIDSIRK 192


>gi|91085741|ref|XP_973638.1| PREDICTED: similar to cytidylate kinase [Tribolium castaneum]
 gi|270010114|gb|EFA06562.1| hypothetical protein TcasGA2_TC009473 [Tribolium castaneum]
          Length = 193

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 44/207 (21%)

Query: 11  GIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  G GK T    +  +           +   R+   +   E     +    +       
Sbjct: 11  GPPGVGKGTQCRKIASYYGFVHISAGELLRRERQVRNSVHGELIDSCIKDGKIVPAEITC 70

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEISV 125
           + +        H+E   +           DRFL   +    E        + D ++ +  
Sbjct: 71  KLL------ERHMEESQQ-----------DRFLIDGFPRNLENREGWSRTIGDKVEVMF- 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEK----RRQIF 177
                   + +D PV++ ++R  NR +   S   D      E++ V  H K        +
Sbjct: 113 -------VLFIDCPVEVCIERCLNRGAAAGSGRFDDTIEVIEKR-VATHLKETQPTVDYY 164

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204
            ++     +   +VD   S  +V  +I
Sbjct: 165 REL-----NLLRVVDGNKSEDAVFEDI 186


>gi|70732787|ref|YP_262550.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase
           [Pseudomonas fluorescens Pf-5]
 gi|68347086|gb|AAY94692.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase
           [Pseudomonas fluorescens Pf-5]
          Length = 625

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 34/148 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  + L++ L  +                   R  +L      
Sbjct: 453 HKGKVIWFTGLSGSGKSTVANALEKELHAQGK-----------------RTYILDGDNVR 495

Query: 62  FGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +     A R++    V  V R  +  G I++      +  +            + 
Sbjct: 496 QGLNKDLGFTDADRVENIRRVAEVARLMMDAGLIVMT-----AFISPFRAEREMARQLIG 550

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
               I          + +D P+++  +R
Sbjct: 551 EDNFIE---------VFVDTPLEVCEQR 569


>gi|300811219|ref|ZP_07091726.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497806|gb|EFK32821.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 215

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 52/171 (30%), Gaps = 37/171 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L + L                   E   + +L     +     
Sbjct: 5   IVLSGPIGAGKSSLTSILAKHL------------GSTAYYEEVNNNPVLPLYYKDMKRYT 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111
             +          E  I  A      +L DR            +D+  A    YQ     
Sbjct: 53  FLLNTYFLNKRLAE--INAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY--- 106

Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             H  +D++ E         PD  I + + +D  LKR+  R    E    D
Sbjct: 107 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRGREFEQLDSD 155


>gi|198436210|ref|XP_002131226.1| PREDICTED: similar to Adenylate kinase isoenzyme 1 (AK 1) (ATP-AMP
           transphosphorylase 1) (Myokinase) [Ciona intestinalis]
          Length = 327

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 73/227 (32%), Gaps = 53/227 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVL 54
           M+S   +   G  G+GK T    +     +  +      D+       G+P  E  + ++
Sbjct: 139 MDSKKIVFVIGGPGSGKGTQCEKIVE---KYGFTHFSSGDLLRAEVNSGSPQGEELKQMM 195

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
               +          +       H E        +G ++  D +          R+  Q 
Sbjct: 196 ERGDLVPMS--TVLKLIKDNMAAHTE-------SKGFLV--DGY---------PREVQQG 235

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE---RKDVMI 169
           +  +         + P CT +L + V  +  +KR+  R     S  +D  E   RK +  
Sbjct: 236 IEFEQ-------SIAP-CTFVLWVDVAQETMVKRLLKRAET--SGRVDDNEETIRKRLKT 285

Query: 170 H----EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                E     +        ++   VDS      V +++ NI  E +
Sbjct: 286 FVESTEPVIDYYKAQ-----NKVRRVDSEQPVDDVFSDVQNIFKEFL 327


>gi|15668837|ref|NP_247640.1| cytidylate kinase [Methanocaldococcus jannaschii DSM 2661]
 gi|2496101|sp|Q58071|KCY_METJA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|1591369|gb|AAB98651.1| cytidylate kinase (cmk) [Methanocaldococcus jannaschii DSM 2661]
          Length = 178

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +    + PD TI    P+++  +R+  R ++ +   L     ++    ++ ++I+   
Sbjct: 85  WMLLKNGIKPDLTIWFKAPLEVRAERISKRENIDKDVALKKMIEREASEKKRYKEIYNID 144

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
             +      ++D++    + V   + + +  L
Sbjct: 145 LDDLSIYDLVIDTSKWDVEGVFNIVSSAIDNL 176


>gi|303389586|ref|XP_003073025.1| putative adenylate kinase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302169|gb|ADM11665.1| putative adenylate kinase [Encephalitozoon intestinalis ATCC 50506]
          Length = 100

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 31/123 (25%)

Query: 95  CDRFLDSSYAYQGERDSSQHLFL-DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
            DR++   Y     R + Q   L DS+          D  I +D+  D  + R+  R   
Sbjct: 1   MDRYILDGY----PRRTDQAEMLGDSV----------DLVIFIDVDKDTCIHRICKRNHG 46

Query: 154 RESACLDYFERKDVMIHEKRRQIF-------LDIARNQPDRCHIVDSAHSFQSVATNILN 206
           R+          +  +  KR  ++       L++ ++   +   VD   S +++ + I  
Sbjct: 47  RDDD--------EEEVGRKRYDVYTKETMPILELYKSY-GKIVRVDGNGSPETIFSKICG 97

Query: 207 IVW 209
           I+ 
Sbjct: 98  IIE 100


>gi|212721146|ref|NP_001132382.1| hypothetical protein LOC100193828 [Zea mays]
 gi|195623514|gb|ACG33587.1| UMP-CMP kinase family protein [Zea mays]
          Length = 212

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 63/216 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 32  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71

Query: 71  FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114
                      +I   + EGKI+                  D+FL   +     R+    
Sbjct: 72  ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKSENDKFLIDGF----PRNEENR 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
              +++ +IS     P   +  D   +   KR+  R   R    ++  +++     +   
Sbjct: 118 AAFENVTKIS-----PAFVLFFDCSEEDMEKRLLGRNQGRVDDNIETIKKRFKTFVDSTL 172

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
              + +     N  D+   +D+A     V  ++  I
Sbjct: 173 PVIEHY-----NSKDKVKKIDAAKPIPEVFEDVKAI 203


>gi|241894872|ref|ZP_04782168.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313]
 gi|241871880|gb|EER75631.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313]
          Length = 209

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 28/177 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT  +LL   L  +           G P          +     F  +   +    
Sbjct: 10  GVGKTTLTTLLAEHLGTR----PFYEPVEGNPVLP---DYYKNPERFAFSLQIYFLNKRF 62

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------DSSQHLFLDSLQEI--- 123
           A        I+ AL +   +L DR +     +  E        D   +++LD L  +   
Sbjct: 63  AM-------IKQALADDNNIL-DRSIYEDALFTAENHKSGNITDVEYNIYLDLLDNMMGE 114

Query: 124 --SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIF 177
             +  +  PD  + +D   D  L R++ R    E    D   E     +  + R+ F
Sbjct: 115 INATAKERPDLLVFIDADFDTILNRIKKRGRDYEQIENDPSLEEYYHRMWNRYREWF 171


>gi|158254992|dbj|BAF83467.1| unnamed protein product [Homo sapiens]
          Length = 355

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|198433100|ref|XP_002120805.1| PREDICTED: similar to Cytoplasmic dynein 2 heavy chain 1 (Dynein
            heavy chain isotype 1B) [Ciona intestinalis]
          Length = 3959

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GKTT   +L+  L R    V + T  P   P  +    + L          
Sbjct: 1630 VVIVGPSGSGKTTLWHVLRGALSRLGRVVKLHTMNPKSMPRNQLLGKIDLDTRE-----W 1684

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR     +V+R  L     ++CD                   +++SL  +
Sbjct: 1685 SDGVLTNSAR-----DVVREPLDVHSWIVCD-------------GDIDPEWIESLNSV 1724


>gi|321398703|emb|CAM71844.2| putative dynein heavy chain [Leishmania infantum JPCM5]
          Length = 4241

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQR    V      P   P     R  LL     +    
Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AAR      V++        ++CD                   +++SL  +
Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037


>gi|226377703|ref|YP_002790752.1| deoxyguanosine kinase [Lactobacillus phage Lb338-1]
 gi|225921481|gb|ACO36994.1| deoxyguanosine kinase [Lactobacillus phage Lb338-1]
          Length = 240

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 24/197 (12%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VFA 72
           G+GK++   +L   L           E           + L+  G  +    A  + VF 
Sbjct: 9   GSGKSSLTKILSDEL--HTKPFFEPVEDNPVLPLFYKGNKLVESGRRKTNPYAFLLQVFF 66

Query: 73  AARLDHVENVIRPALMEGKILLCDR--FLDSSYA---Y------QGERDSSQHLFLDSLQ 121
             R      +I+ A+ +   +L DR  + DS +    Y      Q E +  Q L  + ++
Sbjct: 67  LNRR---FKMIKEAMKQDNNVL-DRSIYEDSIFMKMNYEQGHTTQEEWNIYQSLLRNMME 122

Query: 122 EI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           E+  +  +  PD  +++ +  D  + R++ R    E    D      V  +      + D
Sbjct: 123 ELPYAAHKKSPDLMVLIKVNYDTMINRIEKRGRKFEQIKADP---SLVSYYNDLIARYED 179

Query: 180 IARNQPDR-CHIVDSAH 195
             +        ++D   
Sbjct: 180 WEKEYNQSPLLVIDGNK 196


>gi|225865638|ref|YP_002751016.1| hypothetical protein BCA_3750 [Bacillus cereus 03BB102]
 gi|225790905|gb|ACO31122.1| conserved hypothetical protein [Bacillus cereus 03BB102]
          Length = 192

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 54  ----FIANQKMFIEAKIKKFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151


>gi|146099819|ref|XP_001468756.1| dynein heavy chain [Leishmania infantum]
          Length = 4241

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQR    V      P   P     R  LL     +    
Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AAR      V++        ++CD                   +++SL  +
Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037


>gi|82800128|gb|ABB92339.1| thymidine kinase [Tiger frog virus]
          Length = 195

 Score = 45.4 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  GAGK+T +      L+   Y+V        +   +     L      +F ++ 
Sbjct: 7   IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFL-----DSSYAY-QGERDSSQHLFLDS 119
           + ++  +        + R A     ++++ +R         + A  QG+   ++H  L  
Sbjct: 60  KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLVQ 112

Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + E      +P D  I L+ P +  ++R+  R    E           V         F 
Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF- 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                 PD         S + V  N + ++ ++V + V
Sbjct: 162 ---ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194


>gi|294671317|ref|ZP_06736168.1| hypothetical protein NEIELOOT_03026 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291306949|gb|EFE48192.1| hypothetical protein NEIELOOT_03026 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 244

 Score = 45.4 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 37/187 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I  EG  G+GK+     L  +        ++T  P   P  +     L        G  
Sbjct: 33  YIVVEGSIGSGKSALARRLAEYFNAL----YLTESPETNPFLD-----LFYQNAANHGLA 83

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI--------------LLCDRFLDSSYAYQGERDS 111
            E   F   R   ++ +       G++              ++ D   D+  A      +
Sbjct: 84  TELH-FLMRRAKAIDIINAEETRNGRVVADFLLEKDQIFVPVVLD---DNQQA------N 133

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIH 170
            Q+LF +   ++     +PD  I L    +   +R+ +R  +     L+ F    +  IH
Sbjct: 134 EQNLFWEIKHKVMPDMPLPDLVIYLQTGNEAAQRRLVSRNGV---GALNLFPSGYLNQIH 190

Query: 171 EKRRQIF 177
           E+ R+ F
Sbjct: 191 EEYRRFF 197


>gi|224417678|ref|ZP_03655684.1| shikimate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313141222|ref|ZP_07803415.1| shikimate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313130253|gb|EFR47870.1| shikimate kinase [Helicobacter canadensis MIT 98-5491]
          Length = 166

 Score = 45.4 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 59/196 (30%), Gaps = 46/196 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VFA 72
           G+GK++    L +  +    D  +  E            +    G   F     A  +F 
Sbjct: 13  GSGKSSVAKALYQHTRSLILDSDLMIENNEN---MTIPEIFSQKGEQYFRDLERAFCLFV 69

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           +  + H              ++                         ++++         
Sbjct: 70  SQNIRHC-------------IIST--------------GGGMPMFCDVKQMG-------K 95

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
              LDL  +  L R+     L+     +  ++  + +++KR Q++ D A         ++
Sbjct: 96  VFFLDLSFEDILLRLSKEERLKRPLFKN--QKAALELYQKRYQVYKDSAH------FCIN 147

Query: 193 SAHSFQSVATNILNIV 208
           +  S   +   IL+ +
Sbjct: 148 ANRSIPEITQEILDCL 163


>gi|7076771|emb|CAB75933.1| URIDYLATE KINASE-like protein [Arabidopsis thaliana]
          Length = 210

 Score = 45.4 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 61/213 (28%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + + +                   A +  R  + S              
Sbjct: 34  GGPGSGKGTQCANVVKHFS-----------YTHFSAGDLLRAEIKSGSE----------- 71

Query: 71  FAAARLDHVENVIRPALMEGKIL--------LC--------DRFLDSSYAYQGERDSSQH 114
           F A        +I+  + EG+I+        LC        D+FL   +     R+    
Sbjct: 72  FGA--------MIQSMIAEGRIVPSEITVKLLCKAMEESGNDKFLIDGF----PRNEENR 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              +++  I      P   +  D P +   +R+ +R   RE   ++  +++  +  E   
Sbjct: 120 NVFENVARI-----EPAFVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVEST- 173

Query: 175 QIFLDIAR--NQPDRCHIVDSAHSFQSVATNIL 205
              L I        +   +++A S + V   + 
Sbjct: 174 ---LPIISYYESKGKLRKINAAKSSEEVFEAVR 203


>gi|322502793|emb|CBZ37876.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 4241

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQR    V      P   P     R  LL     +    
Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AAR      V++        ++CD                   +++SL  +
Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037


>gi|238809905|dbj|BAH69695.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 230

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 21/223 (9%)

Query: 1   MNSGLFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M   + I   GI G   +GK+T    L +  +     +    E          + +    
Sbjct: 1   MKKEVIIMVIGISGMISSGKSTLTRNLVKHYKNS--MMLKEYEEDDDVFNTFLKWLYEKQ 58

Query: 58  GVDEFGAEAEAI-VFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDS 111
                G ++  +    +   D  +         +   +  DRF    Y +       +  
Sbjct: 59  PNLTIGFQSYVVENHTSKLADCFKKFSEKGYKYKDNHIFLDRFSIEHYIFANVNLRTKGK 118

Query: 112 SQHLFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 D+L   +  ++  PD  I LD+  D   KR+  R    E+   +    K+    
Sbjct: 119 KYLEGYDALFSHLITKDETPDLAIFLDMTFDTFKKRLFERGREVETENWN----KNKDYF 174

Query: 171 EKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208
            +   ++  +    A+       I+++   + + V    + ++
Sbjct: 175 RELYDLYKPLFIKQAKKYDLNYVIIETDNLTEKQVFEKAVEVI 217


>gi|191639408|ref|YP_001988574.1| adenylate kinase [Lactobacillus casei BL23]
 gi|226743884|sp|B3WAJ7|KAD_LACCB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|190713710|emb|CAQ67716.1| Adenylate kinase (ATP-AMP transphosphorylase) (AK) [Lactobacillus
           casei BL23]
 gi|327383496|gb|AEA54972.1| Adenylate kinase [Lactobacillus casei LC2W]
 gi|327386689|gb|AEA58163.1| Adenylate kinase [Lactobacillus casei BD-II]
          Length = 218

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 74/244 (30%), Gaps = 73/244 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    ++            T         +  R  +        G EA++ +
Sbjct: 7   GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKSFI 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               +   V + +   +++ ++   D   D+ Y   G   + Q    ++L+ I+     P
Sbjct: 54  ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106

Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166
            D  I +D+     + R+  R                     +       ++F+R+D   
Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166

Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                            +  +EK  +  L          H V+       V   I  I+ 
Sbjct: 167 ATVKNRLKVNIEMNTPLLDFYEK--KGLL----------HTVNGDQDIDKVFAEIKAILA 214

Query: 210 ELVQ 213
            + +
Sbjct: 215 AVAK 218


>gi|146342053|ref|YP_001207101.1| putative bifunctional sulfate adenylyltransferase/adenylyl-sulfate
           kinase CysN/CysC [Bradyrhizobium sp. ORS278]
 gi|146194859|emb|CAL78884.1| putative CysN/CysC bifunctional enzyme: Sulfate adenylyltransferase
           (SAT) subunit 1 (N-terminal); Adenylyl-sulfate kinase
           (APS kinase)(C-terminal) [Bradyrhizobium sp. ORS278]
          Length = 620

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 40/144 (27%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  + L++ L    +                   +LL       G   + 
Sbjct: 455 FTGLSGAGKSTIANCLEKKLHTAGFHT-----------------MLLDGDNIRQGLNRDL 497

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +  +  G I++C     S Y        S    +  L     
Sbjct: 498 GFTEADRVENIRRVGEVAKLFVDAGLIVIC--SFISPY-------RSDRDMVREL----- 543

Query: 126 QEVMPDCTI---ILDLPVDIGLKR 146
              MP  T     +D P++  ++R
Sbjct: 544 ---MPPATFFEVFVDTPLEECMRR 564


>gi|89100556|ref|ZP_01173416.1| uridine kinase [Bacillus sp. NRRL B-14911]
 gi|89084743|gb|EAR63884.1| uridine kinase [Bacillus sp. NRRL B-14911]
          Length = 200

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 21/179 (11%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            FI   GI+G   +GKTT ++ LK++LQ + +   +             R+   + G +E
Sbjct: 18  RFIL--GIDGLSRSGKTTLVNRLKQWLQAEGHPAVIFHLDDYIED----RNKRYNTGNEE 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +        F     ++++  +   +  G  L    +++ + ++  +  +     L  ++
Sbjct: 72  WYEY----YFLQWDAEYLKQELFSKVHTGTELTLRFYVEQNDSHFLKNTTIPRKCLIIIE 127

Query: 122 EISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            + +Q   P      D  + LD P +   KR +     +     + + + +    E  R
Sbjct: 128 GVFLQ--RPEWRNHLDYIVYLDCPRETRFKREKEATRQKVDKFENRYWKAEDHYLETVR 184


>gi|218245084|ref|YP_002370455.1| guanylate kinase [Cyanothece sp. PCC 8801]
 gi|218165562|gb|ACK64299.1| Guanylate kinase [Cyanothece sp. PCC 8801]
          Length = 188

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 39/216 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+SG  I   G  G GK T +  L    Q     +   TR P G        + +     
Sbjct: 1   MSSGKLIVLTGPSGVGKGTLVRSLLARHQNLYLSISATTRSPRGGEIDGQDYYFVSVPQF 60

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E   +   +    +A          +   + +G  +L                  + + 
Sbjct: 61  EEMITQENLLEWANYAGNYYGTPRQKVEEKIDQGITVLL---------------EIELVG 105

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              ++E     +      IL   V+   +R++ R +  E A     ER            
Sbjct: 106 ARKIRETFPTAIR---IFILPPSVEELERRLRGRGTEAEEAIARRLERAK---------- 152

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             ++A +      +V+       +    L  + EL+
Sbjct: 153 -EELAASSEFNYTVVN-----DEL-EKALEALEELI 181


>gi|115392071|ref|NP_001065273.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial precursor [Pan troglodytes]
 gi|115502296|sp|Q0MQB7|NDUAA_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|111662243|gb|ABH12226.1| mitochondrial complex I subunit NDUFA10 [Pan troglodytes]
          Length = 355

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|54041625|sp|P28604|NODQ_AZOBR RecName: Full=Bifunctional enzyme nodQ; AltName: Full=Nodulation
           protein Q; Includes: RecName: Full=Sulfate
           adenylyltransferase subunit 1; AltName:
           Full=ATP-sulfurylase large subunit; AltName:
           Full=Sulfate adenylate transferase; Short=SAT; Includes:
           RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase
 gi|46241618|gb|AAS83003.1| sulfate adenylate transferase [Azospirillum brasilense]
          Length = 620

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 40/144 (27%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++R L    +                   ++L       G   + 
Sbjct: 451 FTGLSGSGKSTIANRVERRLHTLGHHT-----------------MMLDGDNVRLGLNRDL 493

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +     G I+LC        A+     + +          +V
Sbjct: 494 GFTDADRVENIRRVGEVAKLMTEAGLIVLC--------AFIAPFRAERE---------AV 536

Query: 126 QEVMPD---CTIILDLPVDIGLKR 146
           + ++PD     + +D P+D  ++R
Sbjct: 537 RALLPDGAFLEVFVDTPLDECMRR 560


>gi|239993158|ref|ZP_04713682.1| uridine kinase [Alteromonas macleodii ATCC 27126]
          Length = 207

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 32/227 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S L I+  G  G+GK+     L      +   V V RE     A +            
Sbjct: 1   MQSPLIIAISGASGSGKSLFTKNLFNGFSAQGRPVQVLREDHYYRAQDHLPMEQREKNNY 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E  +  A    H++     AL +G+ +    +   ++    E +      +  L
Sbjct: 61  DHPNAFEHELLKA----HLQ-----ALRDGQPIDYPHYCYKTHTRLPETERLNPAPVIIL 111

Query: 121 QEI---SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           + I   +  +++P  D  I +D P+DI L R   R            E       E  + 
Sbjct: 112 EGIMLLARTDLLPLYDVKIFIDTPLDICLMRRMMRDLKERGRS---IESVAKQYEETVKP 168

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATN------ILNIVWELVQKRV 216
           ++      +P R        +   V T        L+++   +Q+ +
Sbjct: 169 MYHQFI--EPSRF-------TADVVVTQGGKNQIALDVIKSHIQQAL 206


>gi|313680445|ref|YP_004058184.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977]
 gi|313153160|gb|ADR37011.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977]
          Length = 208

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 22/166 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+  G  G+GK+T   LL    +   + V+   E              L  G   +  
Sbjct: 1   MYIAIAGNIGSGKSTLTRLLAARYRL--HPVYEAVEENP-----YLADFYLDMG--RWAF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-SYAY----QGERDSSQHLFL 117
            ++    A     H+   I P       ++ DR  F D+  +A     QG          
Sbjct: 52  HSQVFFLAKRLDQHLSE-INPRRR----VVQDRTVFEDAHVFARNLRQQGHFSDRDWATY 106

Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +L +   + +  PD  I +   V     R+  R    E A  + +
Sbjct: 107 TALFQGVARALRQPDLLIYIHAGVTTLKARIAKRGRDYERAIPEEY 152


>gi|71083412|ref|YP_266131.1| guanylate kinase [Candidatus Pelagibacter ubique HTCC1062]
 gi|119371258|sp|Q4FMR1|KGUA_PELUB RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|71062525|gb|AAZ21528.1| Guanylate kinase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 210

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 23/164 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ +      GAGKTT + LL +         H TR+P     A+   + +     +   
Sbjct: 7   GIMVILSSPSGAGKTTLVKLLSKNKNFHISISHTTRKPRLNEIADKDYYFVDHDKFENLI 66

Query: 64  AEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              E + +A             +   L +G+ ++ D        +QG            L
Sbjct: 67  KNEEFLEYAKVFNHLYGTTRTPVIEKLEKGENVIFD------IDWQGADQIKNKKLNYKL 120

Query: 121 QEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                       T  + LP   +I  +R+ NR    +    +  
Sbjct: 121 -----------ITFFI-LPPSKEILFERLSNRDMKDKLIVEERM 152


>gi|4758768|ref|NP_004535.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial precursor [Homo sapiens]
 gi|6093592|sp|O95299|NDUAA_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|4191348|gb|AAD09755.1| NADH-ubiquinone oxidoreductase 42 kDa subunit [Homo sapiens]
 gi|13097333|gb|AAH03417.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa [Homo
           sapiens]
 gi|119591579|gb|EAW71173.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa,
           isoform CRA_b [Homo sapiens]
 gi|119591581|gb|EAW71175.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa,
           isoform CRA_b [Homo sapiens]
 gi|123980216|gb|ABM81937.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa
           [synthetic construct]
 gi|123995031|gb|ABM85117.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa
           [synthetic construct]
          Length = 355

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|328912204|gb|AEB63800.1| SPBc2 prophage-derived uncharacterized protein yorR [Bacillus
           amyloliquefaciens LL3]
          Length = 175

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 44/146 (30%), Gaps = 32/146 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG +   K+T    L + L    Y V       G+        +  S          
Sbjct: 4   IILEGTDCCYKSTIADKLSKEL---GYPVIK-----GSSF-----ELAKSGNEK------ 44

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
              +F     +H        L +   ++ DR++ S+  Y  +      L  +  + I  +
Sbjct: 45  ---LF-----EHFNK-----LADEDNVIIDRYIYSNLVYAKKFKDYSILTEEQQRTIEKK 91

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYS 152
                  I L     +  +R+  R  
Sbjct: 92  IRDKAKVIYLHADPKVIKQRLLERGD 117


>gi|33150572|gb|AAP97164.1|AF087854_1 NADH dehydrogenase [Homo sapiens]
          Length = 354

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 122 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 180

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 181 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 225


>gi|298250842|ref|ZP_06974646.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
 gi|297548846|gb|EFH82713.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963]
          Length = 171

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 69/203 (33%), Gaps = 44/203 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG+ G GKT+    +   LQR+ Y                 R +     ++        
Sbjct: 8   IEGVSGTGKTS----VCTELQRRGYQAIH-----------GDRELRYQGDLETGTP---T 49

Query: 69  IVFAAARLDHVENVIRP--ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            +F + R       I    AL+  K        D +  +      +   FL+ L      
Sbjct: 50  DIFTSDRHKSPLWDIEKVQALIANK--------DEAVTFFCGGSRNFSKFLELL------ 95

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
               D   IL++ +D  L+R+  R +L  +      E ++++   +  Q   DI    P 
Sbjct: 96  ----DGVFILEVDLDTCLRRIDERVALDPTDWGGKPEEREII--ARLHQTKEDI----PS 145

Query: 187 RCHIVDSAHSFQSVATNILNIVW 209
              ++D+     SV   IL  V 
Sbjct: 146 SGIVLDATQPLVSVVDEILRHVR 168


>gi|254722532|ref|ZP_05184320.1| hypothetical protein BantA1_08694 [Bacillus anthracis str. A1055]
          Length = 186

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 72/222 (32%), Gaps = 55/222 (24%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56
           MN     I+   + G GKTT    L   L      ++  R       T   +        
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 53

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D    +   +      + H+   IR + ++  I+      D  +AY           
Sbjct: 54  --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 91

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R  +R         D+ E     IH      
Sbjct: 92  ---LNSEMRQFI--DVTIFIDTPLDIAMARRISR---------DFKEDTISEIHNDLEHY 137

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
               R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 138 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 179


>gi|225466049|ref|XP_002263160.1| PREDICTED: similar to Adenylate kinase [Vitis vinifera]
 gi|296084179|emb|CBI24567.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 52/214 (24%)

Query: 6   FISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI+F  G  G+GK T  + +             T       A E  R  +          
Sbjct: 53  FITFVVGGPGSGKGTQCAKIVE-----------TFGFTHISAGELLRREI---------- 91

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117
                   +   +H  ++I  ++ EGKI+       L ++ ++SS      +        
Sbjct: 92  --------SCNSEH-GSMILDSIREGKIVPSEVTVKLIEKEMESSK---NNKFLIDGFPR 139

Query: 118 DSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI---HE 171
                I+ +      P+  +    P +  +KR+ +R   R    +D  +++  +    H 
Sbjct: 140 TEENRIAFERVIGAEPNFVLFFHCPEEEMVKRLLSRNEGRVDDNIDTIKKRLEVFTALHL 199

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205
              + +     ++  + + +++  +   +   + 
Sbjct: 200 PVIKYY-----SEKGKLYKINAVGTVDEIFEQVR 228


>gi|313678155|ref|YP_004055895.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45]
 gi|312950336|gb|ADR24931.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45]
          Length = 217

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 77/221 (34%), Gaps = 21/221 (9%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
           + I   GI G   +GK+T +  L  +     +    +   P      +       +  + 
Sbjct: 1   MII---GISGMISSGKSTLVKKLSDYYPNSIFIEEFSENDPVFNTFLKWCYEKQPNTDIA 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-HLFLDS 119
                 E++    +   H +  ++   ++   +  DRF+   Y +     S +   + ++
Sbjct: 58  FQSFLVESL--TDSFYKHKKEFLKNHNIQDDHIFLDRFILEHYIFAKATLSQKNKKYFEA 115

Query: 120 LQEISVQ----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKR 173
            +++ V     +  PD  + LD+      +R+  R    E   +D F    +        
Sbjct: 116 FEKLFVHIYDSKCNPDFALFLDISWQTFKQRIFQRGRKVE---IDNFYANEEYFKYLNNI 172

Query: 174 RQ-IFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELV 212
            +  F+D+         I+DS   S  SV +  +  +   +
Sbjct: 173 YKSTFVDLLSKYNIPYVIIDSNNKSHSSVLSEAIAAIENHL 213


>gi|42781619|ref|NP_978866.1| hypothetical protein BCE_2558 [Bacillus cereus ATCC 10987]
 gi|42737542|gb|AAS41474.1| hypothetical protein BCE_2558 [Bacillus cereus ATCC 10987]
          Length = 186

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 69/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L         T      PA       +     
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLMNSKALYFDTYNFDNCPA--DICKWIDDGAN 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +       +      + H+   IR + ++  I+      D  +AY    +     F+  
Sbjct: 59  YD----EWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY---LNGEMRQFI-- 100

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
                      D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 101 -----------DVTIFIDTPLDIAMARRILR---------DFKEDAMSEIHNDLKHYITY 140

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 179


>gi|33303941|gb|AAQ02478.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex 10 [synthetic
           construct]
          Length = 356

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|253827028|ref|ZP_04869913.1| shikimate kinase [Helicobacter canadensis MIT 98-5491]
 gi|253510434|gb|EES89093.1| shikimate kinase [Helicobacter canadensis MIT 98-5491]
          Length = 182

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 59/196 (30%), Gaps = 46/196 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VFA 72
           G+GK++    L +  +    D  +  E            +    G   F     A  +F 
Sbjct: 29  GSGKSSVAKALYQHTRSLILDSDLMIENNEN---MTIPEIFSQKGEQYFRDLERAFCLFV 85

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           +  + H              ++                         ++++         
Sbjct: 86  SQNIRHC-------------IIST--------------GGGMPMFCDVKQMG-------K 111

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
              LDL  +  L R+     L+     +  ++  + +++KR Q++ D A         ++
Sbjct: 112 VFFLDLSFEDILLRLSKEERLKRPLFKN--QKAALELYQKRYQVYKDSAH------FCIN 163

Query: 193 SAHSFQSVATNILNIV 208
           +  S   +   IL+ +
Sbjct: 164 ANRSIPEITQEILDCL 179


>gi|142425|gb|AAA22186.1| nodQ [Azospirillum brasilense]
          Length = 620

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 40/144 (27%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++R L    +                   ++L       G   + 
Sbjct: 451 FTGLSGSGKSTIANRVERRLHTLGHHT-----------------MMLDGDNVRLGLNRDL 493

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +     G I+LC        A+     + +          +V
Sbjct: 494 GFTDADRVENIRRVGEVAKLMTEAGLIVLC--------AFIAPFRAERE---------AV 536

Query: 126 QEVMPD---CTIILDLPVDIGLKR 146
           + ++PD     + +D P+D  ++R
Sbjct: 537 RALLPDGAFLEVFVDTPLDECMRR 560


>gi|194290643|ref|YP_002006550.1| deoxyguanosine/deoxyadenosine kinase [Cupriavidus taiwanensis LMG
           19424]
 gi|193224478|emb|CAQ70489.1| putative DEOXYGUANOSINE/Deoxyadenosine KINASE [Cupriavidus
           taiwanensis LMG 19424]
          Length = 213

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 66/198 (33%), Gaps = 33/198 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G+GKT+    L R LQ +    H  R P   P                   + 
Sbjct: 8   IVVEGPVGSGKTSLAQRLARTLQAQELPDHARRSPFLEPF-------YRDPARHALALQL 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQHLFL-DS 119
             +   AA+L       +  +  G+ ++       DR       +     S   L L D+
Sbjct: 61  WCLTQRAAQLQQ----WQAGVAAGQRMVTNFLIARDR------LHAALTLSEDELALYDA 110

Query: 120 L-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +   +++     D  I+L     +  +R+  R    E+         D    ++    + 
Sbjct: 111 IAARLALPPQRADLVIVLQATPSLLRERIVRRGEPGEAGI-------DEHYLQRLAGAYG 163

Query: 179 DIARNQPD-RCHIVDSAH 195
           ++     D    +VD+AH
Sbjct: 164 ELFHRYDDAPVLVVDTAH 181


>gi|134297300|ref|YP_001121035.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Burkholderia vietnamiensis G4]
 gi|134140457|gb|ABO56200.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Burkholderia vietnamiensis G4]
          Length = 641

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 20/95 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  + L++ L  +                   R  +L      
Sbjct: 477 HKGKVIWFTGLSGSGKSTIANALEKELHAQGK-----------------RTYILDGDNVR 519

Query: 62  FGAEAEAIVFAAARLD---HVENVIRPALMEGKIL 93
            G   +     A R++    V  V +  +  G I+
Sbjct: 520 QGLNKDLGFTDADRVENIRRVAEVAKLMMDAGLIV 554


>gi|332179212|gb|AEE14901.1| Dephospho-CoA kinase [Thermodesulfobium narugense DSM 14796]
          Length = 197

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 78/227 (34%), Gaps = 46/227 (20%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----- 54
           M   GL I+  G +G+GK+  ++    FL R  ++V+   E       E  + +      
Sbjct: 1   MKKEGLLIAITGPQGSGKSEVLN----FLSRLGFEVYSADEISKKIFNENFQDIYNMFKS 56

Query: 55  ----LSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
                     +      A++ +        +E++I P + E        +  S       
Sbjct: 57  YFDGRQNYDIQKLRREIALIISKDKFMKKKLEDLIWPKIKE--------YFKSIL----R 104

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           RD    + +  L E ++++   D   I+D P D+ L R+       E             
Sbjct: 105 RDKIVFVEIPLLFEANMEDDF-DIIWIVDAPFDVRLNRLVKSREYSEEEA---------- 153

Query: 169 IHEKRRQIFLDIARNQPDRCHI----VDSAHSFQSVATNILNIVWEL 211
              K R           ++C +    +D +   + V   +L+++  L
Sbjct: 154 ---KVRMNMQWPPSKPIEKCKVPIYYIDGSQDIEDVKKRVLDLLNSL 197


>gi|45686027|ref|YP_003790.1| deoxynucleoside kinase [Ambystoma tigrinum virus]
 gi|37722451|gb|AAP33196.1| deoxynucleoside kinase [Ambystoma tigrinum stebbensi virus]
          Length = 195

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 38/218 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  GAGK+T +      L+   Y+V        +  A+  +  L      +F ++ 
Sbjct: 7   IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWAQLFKMALEDPNRWKFSSQL 59

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAY------QGERDSSQHLFLDS 119
           + ++  +        + R A     ++++ +R  +    +      QG+   +++  L  
Sbjct: 60  KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCDVAMEQGQILPAEYDMLVQ 112

Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + E      +P D  I L+ P +  ++R+  R    E           V         F 
Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAVRGREFERDIP-------VEYLSSLHSNF- 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                 PD         S + V  N + ++  +V K V
Sbjct: 162 ---ARDPDYIM--SGLESNEVVLANAIELIERIVSKNV 194


>gi|109896861|ref|YP_660116.1| uridine kinase [Pseudoalteromonas atlantica T6c]
 gi|109699142|gb|ABG39062.1| uridine kinase [Pseudoalteromonas atlantica T6c]
          Length = 207

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 14/165 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCG 58
           M++ L I+  G  G+GK+     L +        V + RE     A +         +  
Sbjct: 1   MSAPLVIAISGASGSGKSLFTENLLKEFSEDGKHVQILREDHYYRAQDHLPMEEREKNNY 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF-LDSSYAYQGERDSSQHLFL 117
                 E E +V     L + ++V  P            +   +  A   +  S+  + +
Sbjct: 61  DHPKAFEHELLVEHLQALKNWQSVDYPHYC---------YKTHTRLAQTEKLMSAPVIII 111

Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           + +  ++ QE+ P  D  I +D P+DI L R   R        LD
Sbjct: 112 EGIMLLANQELQPLFDIKIFVDTPLDICLLRRMKRDIAERGRTLD 156


>gi|302916675|ref|XP_003052148.1| hypothetical protein NECHADRAFT_60116 [Nectria haematococca mpVI
           77-13-4]
 gi|256733087|gb|EEU46435.1| hypothetical protein NECHADRAFT_60116 [Nectria haematococca mpVI
           77-13-4]
          Length = 227

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 63/216 (29%), Gaps = 45/216 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  + L        L      +   ++  G+   E  +  + +  +      
Sbjct: 39  GGPGAGKGTQCAKLVEEHGFTHLSA-GDLLRAEQQRPGSQFGELIKDYIKNGLIVPM-EV 96

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++  A     +  VI+ +  +       RFL   +             +D   +   
Sbjct: 97  TIALLENA-----MTEVIQKSGDKKG-----RFLIDGF----------PRKMDQAVKFEE 136

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182
                   +  D P D+  KR+  R      +  +          E  R+ F        
Sbjct: 137 SVCPAKLVLFFDCPEDVMEKRILERGKTSGRSDDNA---------ESIRKRFRTFIETSM 187

Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                 ++  +   +D+  +   V      ++ + +
Sbjct: 188 PVVDHFDKEGKVVKLDATPTPNEVFATTQKVLTQRL 223


>gi|307354347|ref|YP_003895398.1| adenylate kinase [Methanoplanus petrolearius DSM 11571]
 gi|307157580|gb|ADN36960.1| Adenylate kinase [Methanoplanus petrolearius DSM 11571]
          Length = 189

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 17/156 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +   G+ G GKTT I   K  L+ +N D                +  + +       
Sbjct: 2   GKRVVITGVPGVGKTTVIDGTKEKLKEENIDYTSINFGTCMFEVACEQGKVKNRDEMRKL 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + E           +  +          ++ D     +        S+   +L  L   
Sbjct: 62  DQMEQKELQKTAAQLIAKI-------QDNVIVD--THCTV-------STPGGYLPGLPSW 105

Query: 124 SVQEVMPDCTIILDLPVD-IGLKRVQNRYSLRESAC 158
            +QE+ PD  I+++  VD I ++R+++    R++  
Sbjct: 106 VLQEMKPDMVILVETDVDQILMRRMKDDTRERDTEG 141


>gi|115394894|ref|XP_001213458.1| uridylate kinase [Aspergillus terreus NIH2624]
 gi|114193027|gb|EAU34727.1| uridylate kinase [Aspergillus terreus NIH2624]
          Length = 210

 Score = 45.0 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 60/212 (28%), Gaps = 46/212 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T  + L R      L   +       RE  G+   +  R  +    +     
Sbjct: 18  GGPGSGKGTQSTNLVRDYGFVHLSAGDLLRAEQVRE--GSQYGDLIRTYIREGKIVPM-- 73

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E    + + A  D ++        +GK     RFL       G                 
Sbjct: 74  EITVALLSNAMADALKQT--EGQGKGKA----RFLID-----GFPRKLDQAV------FF 116

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
              V P + T+ LD P ++  +R+  R              +D    E  R+ F      
Sbjct: 117 EDTVCPSELTLFLDCPEEVMEQRLLKRGETSG---------RDDDNAESIRKRFRTFVET 167

Query: 183 --------NQPDRCHIVDSAHSFQSVATNILN 206
                      D+   V +  S   V   I  
Sbjct: 168 SMPVVEAFAAQDKVVSVSATGSVDEVYARIRE 199


>gi|242133545|gb|ACS87842.1| putative adenylate kinase [Crithidia sp. ATCC 30255]
          Length = 220

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 75/238 (31%), Gaps = 56/238 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREP--GGTPAAEAARHVLLSC 57
           LFI   G  G+GK T    L +      L   N    + RE     TP     + ++   
Sbjct: 3   LFIILFGAPGSGKGTVSERLVKEYGFVHLSAGN----LLREEVQAKTPLGLQCKAIM--- 55

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  +A  +     RL H      P++ E   +L D F                  L
Sbjct: 56  AEGNLIPDALVVDLVCNRLKH------PSVQENG-VLLDGF---------------PRTL 93

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164
              +E+S +    D  + LD+   I L R  +R     +  +             D  + 
Sbjct: 94  RQAEELSARGFKFDMMVFLDVSPQILLDRCLSRRLDPVTGRIYNLKSDPPPPEIVDRLQI 153

Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +       HE R  I+      +  +       +++  + + V   +   + + +Q +
Sbjct: 154 RSDDTKEKHEHRMNIYNKQKEALINHYDGIIVEINADPAIKVVFKTLRKEINKALQNK 211


>gi|284053486|ref|ZP_06383696.1| shikimate kinase [Arthrospira platensis str. Paraca]
          Length = 204

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 40/201 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L   L    Y    T       + +A   +  + G +EF      ++ + 
Sbjct: 38  GAGKSTVGEILANRLS---YKFFDTDVLISQVSGQAIPEIFSTQGEEEFRNLESQVLSSL 94

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
               H+       +  G  ++  R   S   +                            
Sbjct: 95  CAYQHLV------VATGGGVVIKRMNWSYLRHG-------------------------II 123

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           + LD+P     +R++   +       D   R D  I E RR ++      Q D    ++ 
Sbjct: 124 VWLDVPTHCLYERLKGDTTRPLLQHPDPLTRLD-NILETRRHLY-----QQADISITING 177

Query: 194 AHSFQSVATNILNIVWELVQK 214
                 +A  I+  +  ++++
Sbjct: 178 NEKPSEIAEQIITKIPNILKQ 198


>gi|157876329|ref|XP_001686523.1| dynein heavy chain [Leishmania major strain Friedlin]
 gi|68129597|emb|CAJ08142.1| putative dynein heavy chain [Leishmania major strain Friedlin]
          Length = 4241

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQ+    V      P   P     R  LL     +    
Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQQLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AAR      V++        ++CD                   +++SL  +
Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037


>gi|62822188|gb|AAY14737.1| unknown [Homo sapiens]
          Length = 333

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|222100024|ref|YP_002534592.1| Cytidylate kinase [Thermotoga neapolitana DSM 4359]
 gi|254807723|sp|B9K8E3|KCY_THENN RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|221572414|gb|ACM23226.1| Cytidylate kinase [Thermotoga neapolitana DSM 4359]
          Length = 220

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 81/244 (33%), Gaps = 60/244 (24%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAA--EAARHV 53
           G  I+ +G   +GK+T   LL   L  ++ +            +E G  P++  E     
Sbjct: 2   GFQIAIDGPAASGKSTIAKLLAERLGFEHLNTGATYRAVAVYLKEKGLNPSSPREELEKA 61

Query: 54  LLSCGVDEFGAEA--------------EAIVFAAARL------DHVENVIRPALMEGKIL 93
           L    VD                    EA + A+         +H+  + R    +  I+
Sbjct: 62  LKDVKVDYRDGRVFINGKDYTEKIQSPEAGILASDFAKLDLVREHLVRIQREICDDKNIV 121

Query: 94  LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRY 151
           +             E      + L            PD    I L   ++  ++R + R 
Sbjct: 122 V-------------EGRDIGTVVL------------PDAQLKIFLTASLEARIER-KLRE 155

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVD-SAHSFQSVATNILNIVW 209
             ++   +   E +  +I    +     IA  +P +   ++D ++ S   V   IL +V 
Sbjct: 156 YQKKGLNVSREEVERELISRDTQDSSRKIAPLKPAEDAVVIDTTSMSVNEVLQKILKLVE 215

Query: 210 ELVQ 213
           E ++
Sbjct: 216 ERMK 219


>gi|324521183|gb|ADY47799.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10
           [Ascaris suum]
          Length = 336

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 48/117 (41%), Gaps = 9/117 (7%)

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
            +     + +  A     +F   R D   N +   L  G+ ++ +R   S + +     +
Sbjct: 35  EMFYKDPMSDMSAVMRDRIFN-CRFDQYLNAVAHILNTGQGVVLERSPHSDFVFANAMRA 93

Query: 112 SQHLFLDS------LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             ++  +       +++ ++ ++   P   + LD PV + L+ ++   ++ + + LD
Sbjct: 94  KNYIGPEYFKHYFYVRKTALPKLHFWPHLVVYLDAPVSVCLQNIRKEGNVNKVSVLD 150


>gi|196000366|ref|XP_002110051.1| hypothetical protein TRIADDRAFT_53594 [Trichoplax adhaerens]
 gi|190588175|gb|EDV28217.1| hypothetical protein TRIADDRAFT_53594 [Trichoplax adhaerens]
          Length = 304

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 25/169 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--FGA 64
           I+ EG   +GK+T +  L       N  V V  EP          +++     D   +G 
Sbjct: 87  IAVEGNIASGKSTFLKRL-----ESNPQVEVLAEPLEKWQDLGGDNLIHKMYEDPARWGY 141

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121
             +  V       H      P        + +R   S+  Y    +  +   L++++   
Sbjct: 142 LFQNYVLLTMMDVHNAKQQVPFC------VLERSAYSAR-YCFVENLYKSGLLNNMEYKC 194

Query: 122 -----EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF 162
                +  +Q   P  D  + L    ++   R++ R    E    LDY 
Sbjct: 195 YVEWFDFLMQNCKPKLDLIVYLRATPEVCYSRLKARGRKEEETVSLDYL 243


>gi|119493584|ref|ZP_01624248.1| Adenylate kinase [Lyngbya sp. PCC 8106]
 gi|119452574|gb|EAW33757.1| Adenylate kinase [Lyngbya sp. PCC 8106]
          Length = 189

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 51/213 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    + + L   +     T         E  R+ + +              
Sbjct: 4   GGPGAGKGTQTEGICQHL---DIPSIST--------GEVLRNAIANQTN----------- 41

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSY--AYQGERDSSQHLFLDSLQEISV 125
                   +    RP + +G+++   +  RF+      A   +          + Q   +
Sbjct: 42  --------LGQKARPYVEKGELVPDEIMIRFIHQRLLQADVSQGWLLDGYPRTAFQAEEL 93

Query: 126 QEVMPDC------TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQI 176
             ++ D        I L++P D+   R  +R    +   +    R+  + +++     + 
Sbjct: 94  DFLLEDLGQQLNWAIYLNVPKDVLANRTIHRSRSDDKPLIIR--RRIELFYQRTIPILEY 151

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +     +  DR   ++     + V  +IL+ + 
Sbjct: 152 Y-----SPRDRLLDINGNQPPEQVQQDILSQLR 179


>gi|309804873|ref|ZP_07698935.1| deoxyguanosine kinase [Lactobacillus iners LactinV 09V1-c]
 gi|312871198|ref|ZP_07731296.1| deoxyguanosine kinase [Lactobacillus iners LEAF 3008A-a]
 gi|308165812|gb|EFO68033.1| deoxyguanosine kinase [Lactobacillus iners LactinV 09V1-c]
 gi|311093212|gb|EFQ51558.1| deoxyguanosine kinase [Lactobacillus iners LEAF 3008A-a]
          Length = 221

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 45/229 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L ++L                P                   + 
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123
            A +     L+     I+ AL     +L DR +   +  +Q   D  +     + +  E+
Sbjct: 50  YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108

Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173
                    ++ +  PD  I + +  +  +KR+Q R    E    D   E      +++ 
Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYDPTLE----DYYKRL 164

Query: 174 RQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
              +          P    ++D               V   I+  + E+
Sbjct: 165 LTYYQPWYDQYNYSPK--MVIDGDKYDFMNSDDDCDKVLKMIVAKLKEV 211


>gi|212374985|pdb|3DM9|B Chain B, Structures And Conformations In Solution Of The Signal
           Recognition Particle Receptor From The Archaeon
           Pyrococcus Furiosus
          Length = 328

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GKTT I+ L  +L+   + V +      T  A A     L       G + 
Sbjct: 132 IXFVGFNGSGKTTTIAKLANWLKNHGFSVVIAA--SDTFRAGAIEQ--LEEHAKRIGVKV 187

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + A       + I+ A   G  ++L D            R  +     D  ++I+ 
Sbjct: 188 IKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLXDEXKKIA- 237

Query: 126 QEVMPDCTII 135
           +   P+  I 
Sbjct: 238 RVTKPNLVIF 247


>gi|49477757|ref|YP_036662.1| hypothetical protein BT9727_2336 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49329313|gb|AAT59959.1| possible uridine kinase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
          Length = 186

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 49/217 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 41

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     +   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 42  FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 92  LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 140

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208
            R+ +L+     +P+   ++D A S   +   I   +
Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEEL 177


>gi|182624171|ref|ZP_02951958.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|177910787|gb|EDT73147.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
          Length = 192

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 52/219 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +N  + I+  G+  +GKTT I+ LK+ ++     +H           E     +++    
Sbjct: 4   INKTVIIAVSGVTASGKTTIINELKKNIKSA-KSLHFDDYDFEGEV-EDFYQWVINGAD- 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLD 118
                     +    L+ ++  I     + +   +L D +    +AY+            
Sbjct: 61  ----------YNVWNLEPLKEDILKFKGDNETQYILLD-Y---PFAYKN----------- 95

Query: 119 SLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                    + P  DC I ++ P+DI + R   R     S+  D   R+D+  + K    
Sbjct: 96  -------NLIKPFIDCAIFINTPLDIAMARRVLR--DMHSSTGDEI-REDMSFYLK---- 141

Query: 177 FLDIARNQ------PDRCHIVDSAHSFQSVATNILNIVW 209
           +  IA  +      P+  +++D +     +   I++I+ 
Sbjct: 142 YARIAYEEMLNTILPNSDYVIDGSMQLAEIVKQIMDIIK 180


>gi|291515315|emb|CBK64525.1| Adenylate kinase [Alistipes shahii WAL 8301]
          Length = 191

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 44/218 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G GK T    LK        D   T         E  R        DE     
Sbjct: 4   IVLFGAPGCGKGTQAQRLKEHY---GIDHVST--------GEVIR--------DEIRRGT 44

Query: 67  EAIVFAAARLDHVENVIR-PALMEGKILLC--DRFLDSSY-AYQGERDSSQHLFLDSLQE 122
           E           +E  I+   L   +I++   D ++     A     D      + + + 
Sbjct: 45  EL-------GQSMEAYIKAGQLAPDEIVIGMIDHYVTGHMNAAGCIFDGFPRTTVQAEEF 97

Query: 123 ---ISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEK----R 173
              ++   +  D  I + +P +  ++R+  + + S R     +   R  + ++ +     
Sbjct: 98  DKILAGHGLKVDVMIDIHVPEEELVRRILLRGKDSGRADDASEEVIRGRLDVYREQTAVV 157

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +   A     +   V+   + + V + I  ++  L
Sbjct: 158 ADYY---AAQ--GKYASVNGTGTMEEVFSRIAAVIEGL 190


>gi|212709389|ref|ZP_03317517.1| hypothetical protein PROVALCAL_00425 [Providencia alcalifaciens DSM
           30120]
 gi|212688301|gb|EEB47829.1| hypothetical protein PROVALCAL_00425 [Providencia alcalifaciens DSM
           30120]
          Length = 165

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 51/209 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F    G  G+GKTT    L     +  Y    T +     A  +   ++   G + F  
Sbjct: 1   MFYII-GPRGSGKTTIGKKLAE---KTGYQFIDTDKLILERAGMSIADIVQQQGWNYFR- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                         +E+ I  ++     ++            G            ++E  
Sbjct: 56  -------------QLESQILASIESQDAIVST----------GGGIILAPENQQVMRENG 92

Query: 125 VQEVMPDCTIILDLPVDIGLKR------VQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    I L    +  +KR       + R SL   + L+  E     +  +R  I+L
Sbjct: 93  T-------VIYLRSTPETLVKRLAAEPQAEQRPSLTGKSLLEEIE----EVMTQRDPIYL 141

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207
             A       H++D+  S  ++   I N+
Sbjct: 142 STAH------HVIDANQSIDAIIKQIANL 164


>gi|222479253|ref|YP_002565490.1| signal recognition particle-docking protein FtsY [Halorubrum
           lacusprofundi ATCC 49239]
 gi|222452155|gb|ACM56420.1| signal recognition particle-docking protein FtsY [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 371

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L  +L  + Y   +    G T  A A   +      D    E 
Sbjct: 177 IVFTGVNGVGKTTSIAKLSEWLADRGYSSVMA--NGDTYRAGANEQI--QEHADRLDREL 232

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +          + + +  A      ++L D            R  +    +  L++I  
Sbjct: 233 ISHDQGGDPAAVIYDGVEYAEANDIDVVLGD---------TAGRLHTSDDLMAQLEKID- 282

Query: 126 QEVMPDCTIILD 137
           + V PD T+ +D
Sbjct: 283 RVVAPDMTLFVD 294


>gi|145483401|ref|XP_001427723.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394806|emb|CAK60325.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2298

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 24/118 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  G GKTT   +LK+  ++    V      P   P     R  LL    ++    
Sbjct: 69  VVLVGPSGCGKTTIWKVLKKAHEKLGQQVKTHVMNPKSMP-----RSQLLGNMNNDTREF 123

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +E ++ A+ARL     V++ ++     ++CD                   +++SL  +
Sbjct: 124 SEGVLTASARL-----VVKESVDVLNWIICD-------------GDIDPEWIESLNSV 163


>gi|328876862|gb|EGG25225.1| deoxyadenosine kinase [Dictyostelium fasciculatum]
          Length = 254

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 31/186 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL I   G+ G GKTT  + L R L        +          +             F 
Sbjct: 22  GLHIGISGLIGVGKTTLCTALGRVLN-------LPTYYEQVIDNKYLADFYQDPKKYSF- 73

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQH------- 114
                ++    R        +  + +G+  + DR  + DS +A                 
Sbjct: 74  PLQIYLLNNRFRQQ------QQIIWQGRGGVQDRTIYEDSVFAKMLMESGLMEKRDYETY 127

Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
                +L         P+  I LD+  +  L+R++ R    E         + +    + 
Sbjct: 128 CTLFSNLSNFMR---KPNLIIHLDVSPEESLERIKMRDRDCEKTVT----LEYLTNLNRA 180

Query: 174 RQIFLD 179
            Q FL 
Sbjct: 181 YQEFLQ 186


>gi|325568466|ref|ZP_08144833.1| deoxynucleoside kinase [Enterococcus casseliflavus ATCC 12755]
 gi|325158235|gb|EGC70388.1| deoxynucleoside kinase [Enterococcus casseliflavus ATCC 12755]
          Length = 220

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 58/237 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++  +L+                      ++A    +    V       
Sbjct: 10  IVLAGTIGAGKSSLTALIANHF-----------------GSQAFYESIDDNEVLPLFYAD 52

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS--------- 112
               A +     L+     I+ A+ +   +L DR  + DS   +                
Sbjct: 53  PNKYAFLLQIYFLNKRFESIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVKVY 111

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             L  + L+E+  +  +  PD  + + +  +  L+R++ R            E + +   
Sbjct: 112 DELLANMLEELPYAAHKKHPDLLVHIRVSFETMLERIEKRGR----------EYEQLTFD 161

Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH-----SFQSVATNILNIVWELVQK 214
                 + ++ +                +D          Q+ A  +L +V E ++ 
Sbjct: 162 PSLYDYYKELNKRYDQWYEEYNESPKIQIDGDQFNFVEDPQA-AQAVLTMVEEALKD 217


>gi|313224967|emb|CBY20759.1| unnamed protein product [Oikopleura dioica]
          Length = 520

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 63/230 (27%)

Query: 2   NSGLFISFEGIEGAGK---TTHIS------------------LLKRF------------L 28
            +  F + EG+ GAGK   T+ I+                   L+ F            L
Sbjct: 97  KNAKFFTVEGLPGAGKADFTSGIAAGAGLKDMGKGDLMWELTRLRDFKGENNLYNTWKML 156

Query: 29  QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPAL- 87
             + +     R        E  +  + SC + +             R  H  + +   L 
Sbjct: 157 IEEGHHYLAMRSVDMQKFYENPKDHVHSCRMQDH--------MKLQRHIHTMDCLYHLLT 208

Query: 88  -MEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISVQE------VMPDCTI 134
             +G   + +R   S Y Y       G    + +    ++   ++        + P  + 
Sbjct: 209 TAQGT--ITNRTYHSDYCYAYAMMKMGYLSKNYYEMRYTVSHAAIDGSGTATDLTPHVSF 266

Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            LD+  +  L++++ R +  E   +       +   +   + +       
Sbjct: 267 FLDISPEEALEKIKARGNEAEIKTI------TLDFLKHLDEAYRGFWAED 310


>gi|313217866|emb|CBY41264.1| unnamed protein product [Oikopleura dioica]
          Length = 488

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 63/230 (27%)

Query: 2   NSGLFISFEGIEGAGK---TTHIS------------------LLKRF------------L 28
            +  F + EG+ GAGK   T+ I+                   L+ F            L
Sbjct: 97  KNAKFFTVEGLPGAGKADFTSGIAAGAGLKDMGKGDLMWELTRLRDFKGENNLYNTWKML 156

Query: 29  QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPAL- 87
             + +     R        E  +  + SC + +             R  H  + +   L 
Sbjct: 157 IEEGHHYLAMRSVDMQKFYENPKDHVHSCRMQDH--------MKLQRHIHTMDCLYHLLT 208

Query: 88  -MEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISVQE------VMPDCTI 134
             +G   + +R   S Y Y       G    + +    ++   ++        + P  + 
Sbjct: 209 TAQGT--ITNRTYHSDYCYAYAMMKMGYLSKNYYEMRYTVSHAAIDGSGTATDLTPHVSF 266

Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            LD+  +  L++++ R +  E   +       +   +   + +       
Sbjct: 267 FLDISPEEALEKIKARGNEAEIKTI------TLDFLKHLDEAYRGFWAED 310


>gi|282162678|ref|YP_003355063.1| putative signal recognition particle receptor [Methanocella
           paludicola SANAE]
 gi|282154992|dbj|BAI60080.1| putative signal recognition particle receptor [Methanocella
           paludicola SANAE]
          Length = 347

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 13/131 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + F G+ G GKTT I+ L   L+  N  V +    G T  A A     L    D  G + 
Sbjct: 154 VVFTGVNGTGKTTTIAKLAERLKESNVGVVIAA--GDTFRAGAIEQ--LQKHADRLGVKM 209

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                 +     + + +  A    K ++         A    R  +    ++ L++I  +
Sbjct: 210 IKHDQGSDPAAVIYDAVAYAKSNKKDVV--------LADTAGRLHTNVNLMEQLKKI-SR 260

Query: 127 EVMPDCTIILD 137
            + PD  I +D
Sbjct: 261 IIRPDLVIFVD 271


>gi|257058106|ref|YP_003135994.1| guanylate kinase [Cyanothece sp. PCC 8802]
 gi|256588272|gb|ACU99158.1| guanylate kinase [Cyanothece sp. PCC 8802]
          Length = 184

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 39/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+SG  I   G  G GK T +  L    Q     +   TR P G        + +     
Sbjct: 1   MSSGKLIVLTGPSGVGKGTLVRSLLARHQNLYLSISATTRSPRGGEIDGQDYYFVSVPQF 60

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E   +   +    +A          +   + +G  +L                  + + 
Sbjct: 61  EEMITQENLLEWANYAGNYYGTPRQKVEEKIDQGITVLL---------------EIELVG 105

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              +QE     +      IL   V+   +R++ R +  E A     ER            
Sbjct: 106 ARKIQETFPTAIR---IFILPPSVEELERRLRGRGTEAEEAIARRLERAK---------- 152

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             ++A +      +V+       +    L  + EL+  R
Sbjct: 153 -EELAASSEFNYTVVN-----DEL-EKALEALEELIVNR 184


>gi|325857441|ref|ZP_08172496.1| hypothetical protein HMPREF9303_0054 [Prevotella denticola CRIS
           18C-A]
 gi|327314147|ref|YP_004329584.1| hypothetical protein HMPREF9137_1915 [Prevotella denticola F0289]
 gi|325483151|gb|EGC86131.1| hypothetical protein HMPREF9303_0054 [Prevotella denticola CRIS
           18C-A]
 gi|326945080|gb|AEA20965.1| conserved hypothetical protein [Prevotella denticola F0289]
          Length = 357

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 9/108 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V +  E     +     ++  +    
Sbjct: 1   MKR---IVLTGGPCAGKTTALVKVIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNHAFF 57

Query: 61  EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A  E  +    R   +   I+       I++CDR      AY 
Sbjct: 58  YEGEKATLETQLDLEDRFTRMAETIK----TPTIIVCDRGTMDISAYM 101


>gi|302795141|ref|XP_002979334.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii]
 gi|300153102|gb|EFJ19742.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii]
          Length = 459

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
             G  I  EG++ +GK++    L          + V R 
Sbjct: 227 KRGTLIVLEGLDRSGKSSQCHWLMEMKLMAGITLVVDRY 265



 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 30/123 (24%)

Query: 80  ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP 139
             ++   LM G  L+ DR+  S  A+   +     L L+  + + V     D        
Sbjct: 247 HWLMEMKLMAGITLVVDRYSYSGVAFSAAKG----LDLEWCKALGVGLPAADLV------ 296

Query: 140 VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199
                 R +      +     +  RK +    K               C  VD+  SF  
Sbjct: 297 ------RQRKLLCAVDMEMSSWIFRKKLPYSTKV--------------CRFVDARQSFDQ 336

Query: 200 VAT 202
           V  
Sbjct: 337 VHE 339


>gi|313125688|ref|YP_004035958.1| adenylate kinase [Halogeometricum borinquense DSM 11551]
 gi|312292053|gb|ADQ66513.1| Adenylate kinase [Halogeometricum borinquense DSM 11551]
          Length = 213

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 67/239 (28%), Gaps = 58/239 (24%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGV 59
           G  I   G  GAGK T    L       + +   T         +A R      +     
Sbjct: 2   GKHILLLGAPGAGKGTQSKRLASEF---DLEHVTT--------GDALRANKDMDISDMDF 50

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +                D V  +++ AL E      D ++   Y     R+  Q  +L  
Sbjct: 51  EYDTPREYMESGDLVPDDVVNEIVKTALQE-----ADGYVLDGY----PRNIEQAEYLTE 101

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------------- 163
           + ++       D  + LD+  +  ++R+  R    +     + E                
Sbjct: 102 ITDL-------DAVLYLDVSEEELVERLTGRRVCDDCGANYHVEFAPPEEDGVCDDCGGE 154

Query: 164 --RKDVMIHEKRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +++    E  R+    +                   +D   +   V  ++  +V + 
Sbjct: 155 LIQREDDTEETVRERLTVYHKNTEPVVNHYRDEGVLVEIDGEQTPDGVFDDVAEVVEDA 213


>gi|153955460|ref|YP_001396225.1| hypothetical protein CKL_2842 [Clostridium kluyveri DSM 555]
 gi|219855872|ref|YP_002472994.1| hypothetical protein CKR_2529 [Clostridium kluyveri NBRC 12016]
 gi|146348318|gb|EDK34854.1| Gmk [Clostridium kluyveri DSM 555]
 gi|219569596|dbj|BAH07580.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 185

 Score = 45.0 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 41/201 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+GK+T    +   L+++ Y+      TR+P      E     +    +           
Sbjct: 12  GSGKST----ITELLEKEGYNYIQSYTTRKP--RFEGEKGHIFIGDSNIAYINGTI---- 61

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHLFLDSLQEISVQE 127
              ++ +   +VI      G       +  +   YQG+  S        +  L+E     
Sbjct: 62  ---SKNELTSDVIAYTFFNGNH-----YWATKEQYQGKGISVYIIDPSGVKYLKEKVTDA 113

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
                 I L    ++ L R+         A  D          +  R++F  I  +    
Sbjct: 114 ET--VVIYLKCDKEVRLLRMLK--ERDPKAVRDRL--------KNDREVFKIIQCDY--- 158

Query: 188 CHIVDSAHSFQSVATNILNIV 208
             +VDS    + +  ++ +I+
Sbjct: 159 --VVDSNRKVEEILEDVKSII 177


>gi|329120050|ref|ZP_08248720.1| deoxynucleoside kinase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327463581|gb|EGF09899.1| deoxynucleoside kinase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 222

 Score = 45.0 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 56/178 (31%), Gaps = 23/178 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G+GK+     L  +        ++T  P   P  E     L        G 
Sbjct: 11  RYIVVEGAIGSGKSELARRLAGYFDAL----YLTESPETNPFLE-----LFYQNAANHGL 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQH----LFL 117
             E   F   R   + ++I     +   ++ D FL   D  +      D+       LF 
Sbjct: 62  ATELH-FLLRRAKAI-DIINAEEAKNGRVVAD-FLLEKDKIFVPVVLDDNENANEQTLFW 118

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHE 171
           ++  +I  +  +PD  I L        KR++ R     +      L     +      
Sbjct: 119 EAKHKIMPEMPVPDLVIYLQTGGAAAEKRLRARGEGMPNLFPEGYLGRINEEYRRFFH 176


>gi|61200779|gb|AAX39814.1| thymidine kinase [Epizootic haematopoietic necrosis virus]
 gi|225734440|gb|ACO25208.1| deoxynucleoside kinase [Epizootic haematopoietic necrosis virus]
          Length = 195

 Score = 45.0 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  GAGK+T +      L+   Y+V        +   +     L      +F ++ 
Sbjct: 7   IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAY------QGERDSSQHLFLDS 119
           + ++  +        + R A     ++++ +R  +    +      QG+   ++H  L  
Sbjct: 60  KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCDVAMEQGQILPAEHDMLVQ 112

Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + E      +P D  I L+ P +  ++R+  R    E           V         F 
Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAVRGREFERDIP-------VEYLSSLHSKF- 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                 PD         S ++V  N + ++  +V + V
Sbjct: 162 ---ARDPDYIM--SGLESKEAVLANAIELIERIVSRNV 194


>gi|196044663|ref|ZP_03111898.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196024698|gb|EDX63370.1| conserved hypothetical protein [Bacillus cereus 03BB108]
          Length = 192

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 54  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151


>gi|229185888|ref|ZP_04313061.1| hypothetical protein bcere0004_34360 [Bacillus cereus BGSC 6E1]
 gi|228597600|gb|EEK55247.1| hypothetical protein bcere0004_34360 [Bacillus cereus BGSC 6E1]
          Length = 195

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 8   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 57  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154


>gi|105672147|gb|ABF74689.1| AAA [Gonyaulax polyedra]
          Length = 656

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVT-REPGGT-----PAAEAARHVLLSCGVDEFG 63
           G  G+GKTT    + R L + ++  V  T RE GG       +   AR +L+        
Sbjct: 452 GPTGSGKTTVTRDVARLLAEERSVMVVDTARELGGAGVVAHSSLGLARRLLVDSAEQHLA 511

Query: 64  AEAEAIVFAAA 74
           A  EAI+  AA
Sbjct: 512 AVEEAILSHAA 522


>gi|46518741|gb|AAS10182.1| flagellar adenylate kinase [Chlamydomonas reinhardtii]
          Length = 658

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 71/221 (32%), Gaps = 55/221 (24%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K      +YD           A +  R  + S    E G +
Sbjct: 472 IVFVLGGPGSGKGTQCDKIKA-----DYDCVHLS------AGDLLRAEVKSGS--EVGQK 518

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 519 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 558

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD  ++     +MP  T +  D P +   KR+  R     R     D   ++     ++ 
Sbjct: 559 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLDQS 617

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +  +L        +CH++ +  +   V   +   +  L
Sbjct: 618 LPVKDHYLTQ-----GKCHVISAVAAPDDVYGKVKVALEGL 653



 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 72/221 (32%), Gaps = 55/221 (24%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K      +Y+           A +  R  + S    E G +
Sbjct: 63  IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGLK 109

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 110 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 149

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD  ++     +MP  T +  D P +   KR+  R     R     D   ++     ++ 
Sbjct: 150 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFHTFLDQS 208

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +  +L        +CH++ +  +   V   +  ++  L
Sbjct: 209 LPVKDHYLTQ-----GKCHVISAVAAPDDVYGKVKVVLEGL 244



 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 67/210 (31%), Gaps = 55/210 (26%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  G+GK T    +K      +Y+           A +  R  + S    E G +
Sbjct: 282 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGQK 328

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116
            EA++                  EGK++       L  R      A  G+          
Sbjct: 329 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 368

Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD   +     +MP  T +  D P +   KR+  R     R     D   ++     ++ 
Sbjct: 369 LDQAAQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLDQS 427

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSV 200
              +  +L        +CH++ +  +   V
Sbjct: 428 LPVKDHYLTQ-----GKCHVISAVAAPDDV 452


>gi|47567940|ref|ZP_00238647.1| hypothetical protein ATP-binding protein [Bacillus cereus G9241]
 gi|47555418|gb|EAL13762.1| hypothetical protein ATP-binding protein [Bacillus cereus G9241]
          Length = 192

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 67/197 (34%), Gaps = 36/197 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+RK + V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTTL----AKRLERKGFSVIY-ENP--YPIVEKRKRLKLDMNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F A +   +E  I+     +G +++ DR       +        G+    +    D
Sbjct: 54  ----FIANQKMFIEAKIKDFQNAKGSVVIFDRGPEDIEFYTLFYPMVIGKEWDIEIELKD 109

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L ++  +E   D    LD+       R  N    R      + E+  ++  EK      
Sbjct: 110 ELYKL--RECRSDAIFYLDVSESNLYDRKNN---DRTRNRSTFEEQFKLVETEK------ 158

Query: 179 DIARNQPDRCHIVDSAH 195
           D  +  P     VD+  
Sbjct: 159 DWYKQFPVTY--VDANR 173


>gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39]
          Length = 184

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 40/201 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T   +L   L    Y    T       + +A   +  + G +EF      ++ + 
Sbjct: 18  GAGKSTVGEILANRLS---YKFFDTDVLISQVSGQAIPEIFSTQGEEEFRNLESQVLSSL 74

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
               H+       +  G  ++  R   S   +                            
Sbjct: 75  CAYQHLV------VATGGGVVIKRMNWSYLRHG-------------------------II 103

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           + LD+P     +R++   +       D   R D  I E RR ++      Q D    ++ 
Sbjct: 104 VWLDVPTHCLYERLKGDTTRPLLQHPDPLTRLD-NILETRRHLY-----QQADISITING 157

Query: 194 AHSFQSVATNILNIVWELVQK 214
                 +A  I+  +  ++++
Sbjct: 158 NEKPSEIAEQIITKIPNILKQ 178


>gi|42412400|gb|AAS15577.1| cytoplasmic dynein heavy chain 2 [Mus musculus]
          Length = 607

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 30/125 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
            +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL  G  
Sbjct: 76  RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLL--GHI 126

Query: 61  EFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +      +  ++  +AR      V+R        ++CD                   +++
Sbjct: 127 DMDTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIE 168

Query: 119 SLQEI 123
           SL  +
Sbjct: 169 SLNSV 173


>gi|26350549|dbj|BAC38914.1| unnamed protein product [Mus musculus]
          Length = 927

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 30/125 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
            +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL  G  
Sbjct: 66  RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLL--GHI 116

Query: 61  EFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +      +  ++  +AR      V+R        ++CD                   +++
Sbjct: 117 DMDTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIE 158

Query: 119 SLQEI 123
           SL  +
Sbjct: 159 SLNSV 163


>gi|116494699|ref|YP_806433.1| deoxynucleoside kinase [Lactobacillus casei ATCC 334]
 gi|191638197|ref|YP_001987363.1| Deoxyguanosine kinase [Lactobacillus casei BL23]
 gi|227535316|ref|ZP_03965365.1| possible deoxyguanosine kinase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631699|ref|ZP_04674730.1| deoxynucleoside kinase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066259|ref|YP_003788282.1| deoxynucleoside kinase [Lactobacillus casei str. Zhang]
 gi|116104849|gb|ABJ69991.1| Deoxynucleoside kinase [Lactobacillus casei ATCC 334]
 gi|190712499|emb|CAQ66505.1| Deoxyguanosine kinase [Lactobacillus casei BL23]
 gi|227187050|gb|EEI67117.1| possible deoxyguanosine kinase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526164|gb|EEQ65165.1| deoxynucleoside kinase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300438666|gb|ADK18432.1| Deoxynucleoside kinase [Lactobacillus casei str. Zhang]
 gi|327382229|gb|AEA53705.1| Deoxynucleoside kinase subfamily, putative [Lactobacillus casei
           LC2W]
 gi|327385426|gb|AEA56900.1| Deoxynucleoside kinase subfamily, putative [Lactobacillus casei
           BD-II]
          Length = 242

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 42/233 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV--- 70
           GAGKT+   +L   +Q      +     G    A   +         E      A++   
Sbjct: 9   GAGKTSLTKVLSEDMQA---PAYYEDVEGNGMIANMLQKFY--GAGVESRKRTGAMLQIA 63

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLDSLQEIS 124
           F   R   ++  +          + D  L+S +         GE D        +L +  
Sbjct: 64  FLTFRYQQLKKAVTQENA-----IMDSSLESDFVMASQLHKHGEIDDVDFNVYVTLSQEM 118

Query: 125 VQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQI 176
              V        PD  + L +  D  +  +Q+R    E    D  E+ + V  + +    
Sbjct: 119 QSNVNGSPWNGFPDLAVYLKIDPDHEIDEIQSRGRDME----DIREKPELVDYYRRVNTA 174

Query: 177 FLDIARNQ-PDRCHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220
           + D A+         +D        SA    SV   I   + +L   ++SP +
Sbjct: 175 YRDWAKGYTRSSMITIDRDRYDFMHSAADRASVLDQIETKLVDL--GKLSPQA 225


>gi|311259358|ref|XP_003128059.1| PREDICTED: UMP-CMP kinase-like [Sus scrofa]
          Length = 216

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 60/212 (28%), Gaps = 57/212 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFLDSLQ 121
                      +I   + +GKI+       L  R +D + A   Q  +        +   
Sbjct: 80  -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 132

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                + M       D   DI ++R   R      +  +    + +   EKR Q +L   
Sbjct: 133 LQGWNKTM-------DGKADICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQST 179

Query: 182 R------NQPDRCHIVDSAHSFQSVATNILNI 207
           +       +  +   +D++ S   V   ++ I
Sbjct: 180 KPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 211


>gi|150020007|ref|YP_001305361.1| guanylate kinase [Thermosipho melanesiensis BI429]
 gi|149792528|gb|ABR29976.1| Guanylate kinase [Thermosipho melanesiensis BI429]
          Length = 204

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 26/172 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I   G  G GKT+ I+ L   L R  + V   TR P            +      + 
Sbjct: 3   GTLIVVSGPSGVGKTSIINALLNKLDRIVFSVSCTTRPPRPGEINGVDYFFISKEEFKKM 62

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               E + +A    +     +  +   + +G  ++ D  +D   A Q +++ S       
Sbjct: 63  RENGEFLEWAQVHGNLYGTPKKFVVENIKKGNRIILD--IDVQGALQVKKNFS------- 113

Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
                      D   +   P    +   R+  R +  E   L  FE     +
Sbjct: 114 -----------DAVFVFVAPPSYKVLRDRLLKRGTESEEIMLKRFENAKWEM 154


>gi|308321220|gb|ADO27762.1| gpn-loop GTPase 1 [Ictalurus furcatus]
          Length = 398

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 12/102 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVL 54
            I   G+ G+GKTT +  L  +L  K            VH    P      +    + V+
Sbjct: 45  LIVL-GMAGSGKTTFVQRLTAYLHSKKSPPYVINLDPAVHEVPFPANIDIRDTVNYKEVM 103

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G+   G    ++   A R D V   I       + +L D
Sbjct: 104 KQYGLGPNGGIVTSLNLFATRFDQVMKFIEKKQQNHQYVLID 145


>gi|283956711|ref|ZP_06374189.1| hypothetical protein C1336_000270011 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283791788|gb|EFC30579.1| hypothetical protein C1336_000270011 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 165

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 31/144 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG+ +   G+ G+GKTT    L++ L  +N    +          +  R  + +   D  
Sbjct: 2   SGVLVYITGLSGSGKTTLAKELQKELILQNIYPILL-------DGDELRACINNANYDIK 54

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                A+ +          + +    +G I++      S+ +             DS++E
Sbjct: 55  NRMEMAMFYV--------KIAKMLYNQGFIVIL-----STIS-----------MFDSIRE 90

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146
            +         I LD+  +I  KR
Sbjct: 91  FNRNSFQNYLEIFLDVSFEIRKKR 114


>gi|218663465|ref|ZP_03519395.1| hypothetical protein RetlI_31333 [Rhizobium etli IE4771]
          Length = 169

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 47/204 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64
            EG  G GKT+    +   L+R+ + V     V    G T   EA     L         
Sbjct: 8   IEGSSGTGKTS----VATELERRGFHVVHGDRVLAYVGDTETGEA-----LEGPPQGVD- 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                      + H  + I P + + + +  D    +++   G R+  + L +       
Sbjct: 58  ---------RVVWHYAHWIWP-VEKVRAITADTTHPATFFCGGSRNFRKFLDVF------ 101

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                 D   +LD+ V+   +R+  R      A  +                +   +++ 
Sbjct: 102 ------DKVFVLDIDVETLNRRLDGRPDEPGFAPDER----------AVVLQYHRSSKHF 145

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           P     +D+  +  SV  +IL  +
Sbjct: 146 PAGIG-IDTTGTVPSVVDDILAQL 168


>gi|308163350|gb|EFO65693.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative
           [Giardia lamblia P15]
          Length = 215

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 19/151 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG   AGK+T  S L             T      P  E     L      ++G +
Sbjct: 9   FI-LEGNIAAGKSTLASKLADMY---GLT-LFTEPVEENPYLE-----LFYEDPKKWGYQ 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS- 124
            +   F   RL+  +  I+ +      +L DR + S   +         +     +  + 
Sbjct: 59  MQIWFFN-QRLNTYKEAIQASKTAKG-VLLDRSVFSDLVFALNSYEDGFISDADFKLYNE 116

Query: 125 ------VQEVMPDCTIILDLPVDIGLKRVQN 149
                     +P   + LD   +    R+ N
Sbjct: 117 QYQSKLKDLPLPTVILYLDATPETCYYRIHN 147


>gi|323340925|ref|ZP_08081174.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644]
 gi|323091587|gb|EFZ34210.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644]
          Length = 264

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 75/238 (31%), Gaps = 35/238 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGV 59
            I+  GI G+GK++   +L + L  K Y      +  +     G   A   R        
Sbjct: 18  LITLSGIIGSGKSSLTEILSKELGTKAYYEPVEDNPVLPIFYKGNEIAAKKRAA---GEK 74

Query: 60  DEFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQGERDSS 112
           D     A  +  +   R   +   I+ A+     +L DR +          A  G     
Sbjct: 75  DATNPYAYLLQTYFLNRRFAM---IKEAMKNDNNIL-DRSIYEDEIFMKMNAEMGNATKV 130

Query: 113 QHLFLDSLQE-------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           ++    SL          +  +  PD  I + +  +  +KR+  R    E    D     
Sbjct: 131 EYDIYKSLLNNMMEELPYAAHKKSPDLMITIKVSYETMIKRIIKRGRDYEQIEKDP---S 187

Query: 166 DVMIHEKRRQIFLDIARNQPDR-CHIVDSAHS--FQSVATNILNIVWELVQKRVSPLS 220
            V  + +    + D      +    I+D         V   +   + E ++ ++  L 
Sbjct: 188 LVDYYHRLLGHYDDWMDEYDESPLLIIDGDKYDFVADVKDRVK--ILETIEDKLYDLG 243


>gi|255082011|ref|XP_002508224.1| cytoplasmic dynein heavy chain 1b [Micromonas sp. RCC299]
 gi|226523500|gb|ACO69482.1| cytoplasmic dynein heavy chain 1b [Micromonas sp. RCC299]
          Length = 4261

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 24/120 (20%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            G+ I   G  G+GK++   +L+   ++    V               R  LL  G  +  
Sbjct: 1984 GIIIV--GPSGSGKSSLWHILEGAYKKLGRPVKRYVMNPKAIH----RQQLL--GHMDMD 2035

Query: 64   AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                   F     D    V++ +L +   ++CD                   +++SL  +
Sbjct: 2036 TREW---FDGVLTDSARQVVKESLDQHSWIICD-------------GDVDPEWIESLNSV 2079


>gi|326922319|ref|XP_003207397.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial-like [Meleagris gallopavo]
          Length = 378

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSS 112
            D      +A +F   R+    + +   L  G+ ++ +R   S + +      QG     
Sbjct: 147 PDGHSYRLQAWLF-GNRVLQYSDALEHLLTTGQGVVMERSPYSDFVFLDAMFKQGYIHKR 205

Query: 113 QHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
                  ++EI + + + P   I LD+PV    KR+Q +    E 
Sbjct: 206 CVDHYKEIKEIGICEFLPPHLVIYLDVPVPDVQKRLQEKGEPYEK 250


>gi|259500735|ref|ZP_05743637.1| deoxyguanosine kinase [Lactobacillus iners DSM 13335]
 gi|302190812|ref|ZP_07267066.1| deoxyguanosine kinase [Lactobacillus iners AB-1]
 gi|309804052|ref|ZP_07698133.1| deoxyguanosine kinase [Lactobacillus iners LactinV 11V1-d]
 gi|309806090|ref|ZP_07700111.1| deoxyguanosine kinase [Lactobacillus iners LactinV 03V1-b]
 gi|309809713|ref|ZP_07703567.1| deoxyguanosine kinase [Lactobacillus iners SPIN 2503V10-D]
 gi|312872664|ref|ZP_07732729.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874844|ref|ZP_07734863.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2053A-b]
 gi|325912251|ref|ZP_08174648.1| deoxyguanosine kinase [Lactobacillus iners UPII 143-D]
 gi|259167429|gb|EEW51924.1| deoxyguanosine kinase [Lactobacillus iners DSM 13335]
 gi|308163820|gb|EFO66086.1| deoxyguanosine kinase [Lactobacillus iners LactinV 11V1-d]
 gi|308167531|gb|EFO69689.1| deoxyguanosine kinase [Lactobacillus iners LactinV 03V1-b]
 gi|308169892|gb|EFO71931.1| deoxyguanosine kinase [Lactobacillus iners SPIN 2503V10-D]
 gi|311089589|gb|EFQ48014.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2053A-b]
 gi|311091706|gb|EFQ50085.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|325475910|gb|EGC79079.1| deoxyguanosine kinase [Lactobacillus iners UPII 143-D]
          Length = 221

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 45/229 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L ++L                P                   + 
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123
            A +     L+     I+ AL     +L DR +   +  +Q   D  +     + +  E+
Sbjct: 50  YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108

Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173
                    ++ +  PD  I + +  +  +KR+Q R    E    D   E      +++ 
Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYDPTLE----DYYKRL 164

Query: 174 RQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
              +          P    ++D               V   I+  + E+
Sbjct: 165 LTYYKPWYDQYNYSPK--MVIDGDKYDFMNSADDCDKVLKMIVAKLKEV 211


>gi|189501718|ref|YP_001957435.1| hypothetical protein Aasi_0266 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497159|gb|ACE05706.1| hypothetical protein Aasi_0266 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 193

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 50/221 (22%)

Query: 7   ISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEFG 63
           I   G  GAGK T    +  ++        ++ RE     T        +L +   +   
Sbjct: 4   IVLLGPPGAGKGTQSERIVSQYNLTPIVPGNLMREHINQDTSVG----RLLSNYINEGML 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A  + ++      D VE  ++ A   G   L D F          R  +Q + LD L  +
Sbjct: 60  APHKVVM------DLVEEQVK-AQKHGFKFLFDGF---------PRAIAQAISLDEL--L 101

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY----------SLRESACLDYFERKDV---MIH 170
                  D  I LD+P +I  +R+++R             + +  L+ +  + +     +
Sbjct: 102 PKHGHQLDAVIFLDVPDEIVKERIRDRAKVSGRVDDQSDEKIATRLEIYHSETLPVVDYY 161

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           EK+ +++             V+     + V   I+ ++  L
Sbjct: 162 EKQNKLY------------RVEGMGPVEDVFERIIQVINPL 190


>gi|148284194|ref|YP_001248284.1| adenylate kinase [Orientia tsutsugamushi str. Boryong]
 gi|166219991|sp|A5CCJ2|KAD_ORITB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|146739633|emb|CAM79422.1| Adenylate kinase [Orientia tsutsugamushi str. Boryong]
          Length = 210

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 61/234 (26%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + + F G  G+GK T  SLL       +   V  T     T  A+  +  + S  +    
Sbjct: 1   MILVFIGPPGSGKGTQASLLSEKFSIISVGKVLRTVMESNTAEADVVKKFIKSGKLVP-S 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                IV  A             + + K ++ D +          RD  Q  FL    ++
Sbjct: 60  NITNKIVVNA----------LKNIEQCKSIILDGY---------PRDIFQADFLQENLQM 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------------KDVMI 169
             +       +  D+   + L+R++ R S  +   +  + +                   
Sbjct: 101 DFK------VLFFDIDDAVVLRRLRGRISCTDCGTI--YNKLYCMPKINGVCDICNSSSF 152

Query: 170 HEKR---------R-QIF-------LDIARNQPDRCHIVDSAHSFQSVATNILN 206
             +          R + +       L+  + Q ++  ++D+  S +++   I  
Sbjct: 153 QNRVDDDESIIKLRLESYKKETLPLLEFYKAQ-NKLTLIDANQSTENILKKIKK 205


>gi|94265267|ref|ZP_01289026.1| Guanylate kinase [delta proteobacterium MLMS-1]
 gi|93454248|gb|EAT04564.1| Guanylate kinase [delta proteobacterium MLMS-1]
          Length = 210

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 66/233 (28%), Gaps = 47/233 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G         GAGKTT +  +     R  + + H TR P          H +     
Sbjct: 1   MSRGCLFVVSAPSGAGKTTLLKKILATTPRAGFSISHTTRPPRAGEQDGVDYHFVDRDTF 60

Query: 60  DEFGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           D      + +         +  +R       I  AL  G+ +  D         QG R  
Sbjct: 61  DRMRRRGDFLEAAEVHGNFYGTSRAA-----IEAALARGEDIFLD------IDVQGARQI 109

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMI 169
                + +               +   P    +  +R++ R +  E+      E     +
Sbjct: 110 RDLAEIAA-------------VFLFIAPPSAAILEQRLRGRDTDDEATIALRLENARREM 156

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            E     +  +  N   R          + +   I  IV E  ++R  P    
Sbjct: 157 EEA--AWYDYLVINDKLR--------QAEELLAAI--IVAERCRRRRWPDGEP 197


>gi|261346230|ref|ZP_05973874.1| shikimate kinase [Providencia rustigianii DSM 4541]
 gi|282565538|gb|EFB71073.1| shikimate kinase [Providencia rustigianii DSM 4541]
          Length = 165

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 49/208 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F    G  G+GKTT    L     +  Y    T +     A  +   ++   G D F  
Sbjct: 1   MFYII-GPRGSGKTTIGKRLAE---KTGYQFIDTDKCIVEQAGMSIAEIVELQGWDYFR- 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                        H+E+ +  ++     ++                +   + L    +  
Sbjct: 56  -------------HLESDVLKSIQSQDAIVS---------------TGGGIILAPENQQV 87

Query: 125 VQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIFLD 179
           ++    D    I L    +I  KR+       +   L      E +   + E+R  I+L 
Sbjct: 88  MR----DNGVVIYLHSTPEILAKRLAAEPQAEQRPSLTGKSLLE-EIAEVMEQRDPIYLS 142

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207
            A       H++D+  S  ++ + I N+
Sbjct: 143 TAH------HVIDANQSIDAIISQIANL 164


>gi|254167206|ref|ZP_04874059.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
           boonei T469]
 gi|197624062|gb|EDY36624.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
           boonei T469]
          Length = 307

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L ++L+ K Y V +    G T  A A   + +    D  G + 
Sbjct: 114 IMFLGVNGTGKTTVIAKLAKYLKDKGYSVVMAA--GDTFRAGAIEQISIHG--DNLGIKV 169

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                         + I  A  +    +L D     +        +     +  ++ ++ 
Sbjct: 170 IKHQAGGDPAAVCYDAIEHAKAKHRDFVLID-----TAGRMQTNRNL-MEEMKKIKRVA- 222

Query: 126 QEVMPDCTII 135
               P  TI 
Sbjct: 223 ---KPHLTIF 229


>gi|61200784|gb|AAX39815.1| thymidine kinase [Wamena iridovirus]
          Length = 195

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  GAGK+T +      L+   Y+V        +   +     L      +F ++ 
Sbjct: 7   IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFL-----DSSYAY-QGERDSSQHLFLDS 119
           + ++  +        + R A     ++++ +R         + A  QG+   ++H  L  
Sbjct: 60  KIMLTQS-------EIQRDAKKSDRRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLVQ 112

Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           + E      +P D  I L+ P +  ++R+  R    E           V         F 
Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF- 161

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                 PD         S + V  N + ++ ++V + V
Sbjct: 162 ---ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194


>gi|49237383|ref|YP_031664.1| putative deoxynucleoside kinase [Frog virus 3]
 gi|47060201|gb|AAT09745.1| putative deoxynucleoside kinase [Frog virus 3]
 gi|61200789|gb|AAX39816.1| thymidine kinase [Frog virus 3]
          Length = 195

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 80/219 (36%), Gaps = 40/219 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+F G  GAGK+T +      L+   Y+V        +   +     L      +F ++ 
Sbjct: 7   IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59

Query: 67  EAIVFAAARLDHVENVIRPALME--GKILLCDRFL-----DSSYAY-QGERDSSQHLFLD 118
           + ++        +++ I+ A  +   ++++ +R         + A  QG+   ++H  L 
Sbjct: 60  KIML--------IQSEIQRAAKKSDNRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLV 111

Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            + E      +P D  I L+ P +  ++R+  R    E           V         F
Sbjct: 112 QIWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF 161

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                  PD         S + V  N + ++ ++V + V
Sbjct: 162 ----TRDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194


>gi|119776498|ref|YP_929238.1| DamX domain-containing protein [Shewanella amazonensis SB2B]
 gi|119768998|gb|ABM01569.1| DamX domain protein [Shewanella amazonensis SB2B]
          Length = 512

 Score = 44.6 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +  +GIEGAGK+T ++ L   L+  N  + V   P    AAE  R +L+    D    +
Sbjct: 30 LVVIQGIEGAGKSTLLTALVSELEDYNSALVVC--PMHADAAEIRRKILIQLLADPLFDD 87

Query: 66 AEAI 69
           E +
Sbjct: 88 EEPL 91


>gi|301785802|ref|XP_002928318.1| PREDICTED: UMP-CMP kinase-like [Ailuropoda melanoleuca]
          Length = 192

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 26/150 (17%)

Query: 78  HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125
               +I   + +GKI+       L  R  D + A   Q  +          D+LQ     
Sbjct: 44  QYGELIEKYIKDGKIVPVEITISLLKREKDQTMAANAQMNKFLIDGFLRNKDNLQGWKKT 103

Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
            +   D    +  D   +I ++R   R      +  +    + +   EKR Q +L   + 
Sbjct: 104 MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKP 157

Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207
                 +  +   +D++ S   V   ++ I
Sbjct: 158 IIDLYEEMGKVKKIDASKSVDEVFDEVVKI 187


>gi|269219024|ref|ZP_06162878.1| uridine kinase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212135|gb|EEZ78475.1| uridine kinase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 208

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 29/190 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  G+GKTT    L      K+  V            A   R +L     D F  +    
Sbjct: 15  GGTGSGKTTLTRKLVERFPGKSSVVFHDSYYKAHDDLAYEERCLLNYDHPDAFDNDL--- 71

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 ++H+       L  G+ + C  +  SSY         +   +     I V+ ++
Sbjct: 72  -----MVEHLRR-----LAAGRPVECPVYDYSSYNRSDRTRRIEPAPI-----IVVEGIL 116

Query: 130 ----P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               P      D  + +D   D+ + R   R  +     L+  ER+ +   +   +++++
Sbjct: 117 IYAAPEICELLDIKVFVDTDADVRILRRIKRDVVERGRTLESVERQYLTTVKPMHELYVE 176

Query: 180 IARNQPDRCH 189
            ++   D   
Sbjct: 177 PSKRNADIIV 186


>gi|228992342|ref|ZP_04152273.1| hypothetical protein bpmyx0001_30840 [Bacillus pseudomycoides DSM
           12442]
 gi|228767367|gb|EEM15999.1| hypothetical protein bpmyx0001_30840 [Bacillus pseudomycoides DSM
           12442]
          Length = 182

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 25/157 (15%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GKTT    L R L++  + +     P G    E  +++ L     E         F   
Sbjct: 3   SGKTT----LARRLKKHGFPILY-ENPYG--IVEKRKNLNLDIYTKEG--------FITN 47

Query: 75  RLDHVENVIRPA-LMEGKILLCDRFLDS---SYAYQGERDSSQHLFLDSLQE--ISVQEV 128
           +   +E  I+      G+I++ DR  +       Y  +         + L++    ++  
Sbjct: 48  QRMFIEAKIKEIQNARGRIVIFDRGSEDIEFYTIYFPKLIGMDWDIENELKDELYKLRRC 107

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
             D    LD+   I  +R +N  + R S     FE++
Sbjct: 108 RSDAIFYLDVSKKILQERKKNDNTRRRST----FEKQ 140


>gi|91205856|ref|YP_538211.1| adenylate kinase [Rickettsia bellii RML369-C]
 gi|122425380|sp|Q1RHP2|KAD_RICBR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|91069400|gb|ABE05122.1| Adenylate kinase [Rickettsia bellii RML369-C]
          Length = 212

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 80/237 (33%), Gaps = 59/237 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62
           + I F G  GAGK T    + +        +H+          +  R ++   S   +  
Sbjct: 1   MIIIFLGPPGAGKGTQGKKIAK-------KIHLP----HIAIGDIFRAIIKTSSKDAEVI 49

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  E         + V ++I+  L        D      Y   G   + +       + 
Sbjct: 50  NSYVEQGKLIPD--EIVNHIIKNFLSS-----SD--YKKGYILDGYPRNLEQA--KFFES 98

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYF------------------ 162
              +++     I L++  ++ +KR+  RYS +    +  DYF                  
Sbjct: 99  FVTEKIK---VIYLNVSDELLIKRILGRYSCKSCGKIYNDYFLKPRIDKICDVCKSSVFE 155

Query: 163 ----ERKDVMIHEKRRQIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209
               + ++V I E+   IF      + ++  +    +++D   + + +  +I  ++ 
Sbjct: 156 YRKDDNEEV-IKERI-NIFKTETYPLIQHYKNNDDFYMIDGNKNEEQIEDHIEKVLK 210


>gi|78062089|ref|YP_371997.1| hypothetical protein Bcep18194_B1239 [Burkholderia sp. 383]
 gi|77969974|gb|ABB11353.1| hypothetical protein Bcep18194_B1239 [Burkholderia sp. 383]
          Length = 274

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             +  EGI G+GK+T + ++ + L    +D     E        A     L    + +  
Sbjct: 40  RLVIVEGIMGSGKSTAMRVIAKHLTAAGHDAVAIHERTDPHPVRATDE--LEHWFEPWRD 97

Query: 65  EAEAIVFAAARL 76
              A +  A R 
Sbjct: 98  ATAAHL--AGRA 107


>gi|228927612|ref|ZP_04090664.1| uridine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|228832092|gb|EEM77677.1| uridine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
          Length = 198

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 13  MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 53

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     +   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 54  FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 103

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 104 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 152

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 153 ARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 191


>gi|226505606|ref|NP_001148719.1| LOC100282335 [Zea mays]
 gi|194698310|gb|ACF83239.1| unknown [Zea mays]
 gi|195621636|gb|ACG32648.1| uridylate kinase [Zea mays]
          Length = 212

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 62/216 (28%), Gaps = 63/216 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 32  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71

Query: 71  FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114
                      +I   + EGKI+                  D+FL   +     R+    
Sbjct: 72  ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKNENDKFLIDGF----PRNEENR 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
              +++ +IS     P   +  D       KR+  R   R    ++  +++     E   
Sbjct: 118 AAFENVTKIS-----PAFVLFFDCSEKEMEKRLLGRNQGRVDDNIETIKKRFKTFVESSL 172

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
              + +        D+   +D+A     V  ++  I
Sbjct: 173 PVIEHYNSR-----DKVKKIDAAKPIPEVFEDVKTI 203


>gi|118478892|ref|YP_896043.1| hypothetical protein BALH_3291 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118418117|gb|ABK86536.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 217

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 30  ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 78

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 79  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 134

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   SA  + F
Sbjct: 135 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSAFEEQF 176


>gi|254167609|ref|ZP_04874460.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
           boonei T469]
 gi|289596933|ref|YP_003483629.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
           boonei T469]
 gi|197623418|gb|EDY35982.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
           boonei T469]
 gi|289534720|gb|ADD09067.1| signal recognition particle-docking protein FtsY [Aciduliprofundum
           boonei T469]
          Length = 307

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L ++L+ K Y V +    G T  A A   + +    D  G + 
Sbjct: 114 IMFLGVNGTGKTTVIAKLAKYLKDKGYSVVMAA--GDTFRAGAIEQISIHG--DNLGIKV 169

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                         + I  A  +    +L D     +        +     +  ++ ++ 
Sbjct: 170 IKHQAGGDPAAVCYDAIEHAKAKHRDFVLID-----TAGRMQTNRNL-MEEMKKIKRVA- 222

Query: 126 QEVMPDCTII 135
               P  TI 
Sbjct: 223 ---KPHLTIF 229


>gi|193214182|ref|YP_001995381.1| deoxynucleoside kinase [Chloroherpeton thalassium ATCC 35110]
 gi|193087659|gb|ACF12934.1| deoxynucleoside kinase [Chloroherpeton thalassium ATCC 35110]
          Length = 216

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 59/193 (30%), Gaps = 19/193 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I+ EG+ G GKT+    L        + + +         A        +       A
Sbjct: 9   KYIAIEGVIGVGKTSLAKKLSEKC---GHRLLLEEFEENPFLA----SFYQNPQCFALPA 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   + F   R      +   +L    + + D     +  +     + +   L S     
Sbjct: 62  Q---LFFLLRRYKQQHQISEISLAANGL-ISDYSFQKNDIFAKTTLNKEEFSLYSAYAEI 117

Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +Q     PD  + L    +  +K +  R    E      + +K   +H    + F   A 
Sbjct: 118 LQANIPKPDLVVYLQSTPERLIKNIHQRARRYEHCIESPYIKK---LHAAYNEFFFAFAS 174

Query: 183 NQPDRCHIVDSAH 195
           +      ++D + 
Sbjct: 175 SNQ---CVIDVSQ 184


>gi|118477951|ref|YP_895102.1| hypothetical protein BALH_2297 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118417176|gb|ABK85595.1| possible uridine kinase [Bacillus thuringiensis str. Al Hakam]
          Length = 202

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 17  MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     +   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 58  FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 107

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 108 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 156

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 157 ARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 195


>gi|229017874|ref|ZP_04174757.1| uridine kinase [Bacillus cereus AH1273]
 gi|229024078|ref|ZP_04180551.1| uridine kinase [Bacillus cereus AH1272]
 gi|228737220|gb|EEL87742.1| uridine kinase [Bacillus cereus AH1272]
 gi|228743465|gb|EEL93582.1| uridine kinase [Bacillus cereus AH1273]
          Length = 189

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 17/88 (19%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183
           D TI +D P+DI + R   R         D+ E     IH          R+ +L+    
Sbjct: 104 DITIFIDTPLDIAMARRIMR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 154

Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+   ++D + S   +   I+  +  
Sbjct: 155 VKPNSDIVLDGSLSISEIIDQIIEELNR 182


>gi|218903685|ref|YP_002451519.1| hypothetical protein BCAH820_2569 [Bacillus cereus AH820]
 gi|218537686|gb|ACK90084.1| hypothetical protein BCAH820_2569 [Bacillus cereus AH820]
          Length = 186

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L                      + +      
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 41

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     +   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 42  FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 92  LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 140

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEELYR 179


>gi|328553023|gb|AEB23515.1| nucleotide kinase; phage SPbeta [Bacillus amyloliquefaciens TA208]
          Length = 165

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 44/146 (30%), Gaps = 32/146 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG +   K+T    L + L    Y V       G+        +  S          
Sbjct: 4   IILEGTDCCYKSTVADKLGKEL---GYPVIK-----GSSF-----ELAKSGNEK------ 44

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
              +F     +H        L +   ++ DR++ S+  Y  +      L  +  + I  +
Sbjct: 45  ---LF-----EHFNK-----LADEDNVIIDRYIYSNLVYAKKFKDYSILTEEQQRTIEKK 91

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYS 152
                  I L     +  +R+  R  
Sbjct: 92  IRDKAKVIYLHADPKVIKQRLLERGD 117


>gi|326674493|ref|XP_002664761.2| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Danio rerio]
          Length = 1754

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 24/114 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  GAGK+T   +L+  L +    V   T  P   P     R  LL     +    ++ +
Sbjct: 525 GPSGAGKSTLWRMLRAALGKTGRLVKQYTMNPKAMP-----RQQLLGHIDMDTREWSDGV 579

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           + ++AR      V+R        ++CD                   +++SL  +
Sbjct: 580 LTSSAR-----QVVREPQEVNSWIICD-------------GDIDPEWIESLNSV 615


>gi|309807856|ref|ZP_07701788.1| deoxyguanosine kinase [Lactobacillus iners LactinV 01V1-a]
 gi|312873534|ref|ZP_07733583.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2052A-d]
 gi|315654171|ref|ZP_07907087.1| deoxyguanosine kinase [Lactobacillus iners ATCC 55195]
 gi|329919768|ref|ZP_08276719.1| deoxyguanosine kinase [Lactobacillus iners SPIN 1401G]
 gi|308168958|gb|EFO71044.1| deoxyguanosine kinase [Lactobacillus iners LactinV 01V1-a]
 gi|311090930|gb|EFQ49325.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2052A-d]
 gi|315488867|gb|EFU78513.1| deoxyguanosine kinase [Lactobacillus iners ATCC 55195]
 gi|328937115|gb|EGG33543.1| deoxyguanosine kinase [Lactobacillus iners SPIN 1401G]
          Length = 221

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 45/229 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L ++L                P                   + 
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123
            A +     L+     I+ AL     +L DR +   +  +Q   D  +     + +  E+
Sbjct: 50  YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108

Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173
                    ++ +  PD  I + +  +  +KR+Q R    E    D   E      +++ 
Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYDPTLE----DYYKRL 164

Query: 174 RQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
              +          P    ++D               V   I+  + E+
Sbjct: 165 LTYYKPWYDQYNYSPK--MVIDGDKYDFMNSDDDCDKVLKMIVAKLKEV 211


>gi|306816673|ref|ZP_07450805.1| hypothetical protein ECNC101_08644 [Escherichia coli NC101]
 gi|305850238|gb|EFM50697.1| hypothetical protein ECNC101_08644 [Escherichia coli NC101]
          Length = 252

 Score = 44.6 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +       + ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISRFLAQRERCLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|111224352|ref|YP_715146.1| adenylate kinase [Frankia alni ACN14a]
 gi|111151884|emb|CAJ63604.1| Adenylate kinase (ATP-AMP transphosphorylase) [Frankia alni ACN14a]
          Length = 198

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 64/212 (30%), Gaps = 36/212 (16%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64
              G  G+GK T  + +     R       T +      A   +  R         E   
Sbjct: 4   VLLGPPGSGKGTQGARISA---RHGIPAISTGQLFDRQIAAGTDLGRRAERYVRAGELVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   +   A RLD   +     L++G                  R   Q   LD +   S
Sbjct: 61  DEIVLDMVAERLDGSVDCAVGFLLDGF----------------PRTYPQAEALDRMLAAS 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF------L 178
              +  D  I LD+ +D  L R++ R         D  +        +R ++F      L
Sbjct: 105 CGPL--DAVIDLDVDIDEVLDRIRRRAHTE-----DRVDD-GDDTARRRLKVFAEETAPL 156

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                +      VD A +   VA  I  ++ +
Sbjct: 157 RRYYRRSGLLRTVDGAGTPDEVAARIERVLAD 188


>gi|149278303|ref|ZP_01884441.1| guanylate kinase (GMP kinase) [Pedobacter sp. BAL39]
 gi|149231069|gb|EDM36450.1| guanylate kinase (GMP kinase) [Pedobacter sp. BAL39]
          Length = 190

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 51/227 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I F    GAGKTT +  L +     ++ +   TRE  G    E   + +     
Sbjct: 1   MIQGKLIIFSAPSGAGKTTIVKHLLKKFPELSFSISATTREARGDEQHEKDYYFISK--- 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  E+ +   A  +                    F++    Y G    +    ++ 
Sbjct: 58  -------ESFLHKVAHQE--------------------FVEFEEVYNGTFYGTLRSEIER 90

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----------LDYFERKDVMI 169
           +             +I D+ V+ GL R++ +Y     A            +    +    
Sbjct: 91  IWNAGQH-------VIFDIDVEGGL-RLKRKYEEDALAIFVQPPSLEVLKERLTGRGTDS 142

Query: 170 HEKRRQIFLDIARN--QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            EK ++ F+   +     D+  I+   +  ++       ++ + + K
Sbjct: 143 QEKLQERFIKAEKELNYADKFDIILKNYDLETACKEAEQLIGDFINK 189


>gi|116334282|ref|YP_795809.1| deoxynucleoside kinase [Lactobacillus brevis ATCC 367]
 gi|116099629|gb|ABJ64778.1| Deoxynucleoside kinase [Lactobacillus brevis ATCC 367]
          Length = 210

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 82/227 (36%), Gaps = 34/227 (14%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGKT+  +LL   L +          P    + +  + + L     +  A   
Sbjct: 3   VLSGTIGAGKTSLTTLLAEHLHK----------PAFYESVDDNKILPLFYQNPQKYAFLL 52

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHLF 116
            I F   RLD     I+ A  + + +L DR  F DS           A   E D    L 
Sbjct: 53  QIYFLNKRLDS----IKAANADDETVL-DRSIFEDSLLFHLNADLGRATSTEVDIYDSLL 107

Query: 117 LDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            + +QE+  +  +  PD  I +++  +  L+R++ R    E    D         +++  
Sbjct: 108 ANMMQELPEATHKKNPDLLIHINISFETMLERIKKRGRSFEQIDHDP---SLYEYYQQLD 164

Query: 175 QIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
           Q ++D          + +D       V        V  L+ ++++ L
Sbjct: 165 QRYVDWYNAYDKSPKMQIDGDQ-LDFVEDPAARQQVLHLIDEKIASL 210


>gi|269969374|sp|P0CB90|NDUAA_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|111662247|gb|ABH12228.1| mitochondrial complex I subunit NDUFA10 [Pongo pygmaeus]
          Length = 355

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|297669866|ref|XP_002813106.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial-like [Pongo abelii]
          Length = 355

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|90417803|ref|ZP_01225715.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337475|gb|EAS51126.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 527

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 58/220 (26%), Gaps = 60/220 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--------LS 56
             I+  G+ G+GK+T  + L                   T +++  R  L        L 
Sbjct: 334 RLIAVGGLSGSGKSTVAAALAPR--------IGPAPGARTLSSDRIRKRLCGVSAETRLE 385

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD----RFLD-SSYAYQGERDS 111
                           AA  +H+       L  G  ++ D    R +D S  A       
Sbjct: 386 ANAYTSDTTERVYAAMAADAEHI-------LRLGYGVVADATFERAVDRSRIAATARDAG 438

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                L                  LD+     L+RV  R +    A              
Sbjct: 439 VDFQGL-----------------WLDVDPAEMLRRVAARRNDPSDATTAI---------- 471

Query: 172 KRRQIFLDIARNQPDR-CHIVDSAHSFQSVATNILNIVWE 210
             RQ    +AR+  D     +D     + VA      V  
Sbjct: 472 -VRQ---QLARDPGDIDWERIDGDGEPERVAETARRAVDR 507


>gi|241761713|ref|ZP_04759800.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374021|gb|EER63554.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 240

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 73/237 (30%), Gaps = 45/237 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRK---------------NYDVHVTREPGGTPAAEAA 50
            I+  G +G+GKTT    L  +LQ                    +      G     +  
Sbjct: 14  LIALVGADGSGKTTVGQELLEWLQTMRPTAFCHLGKQTGNWGRAIARMPFVGKKLDKQVI 73

Query: 51  RHVLLSCGVDEFGAEAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDS-------- 101
                +      GA    ++FA + R       +R    +G ++L DR+  +        
Sbjct: 74  ARSSKARDEKGAGATVSIVIFALSMRRVFRFLRMRRLHRKGFMILTDRYPQAVVPGPMDG 133

Query: 102 --SYAYQGERDSSQHLF--LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               A   +   ++ L     +L +  +    PD  I L++ ++  LKR          A
Sbjct: 134 PGLVARNPKGMIARFLTGREQALYDW-MASYKPDIVIRLNVDLETALKR----KPDHRPA 188

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            L+           K R +        P     +DS      V       + +++ +
Sbjct: 189 SLER----------KVRDVPRLSFNGAP--ILDLDSREPLDQVIGKAKAAILDVIAR 233


>gi|218663489|ref|ZP_03519419.1| hypothetical protein RetlI_31465 [Rhizobium etli IE4771]
          Length = 198

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 50/156 (32%), Gaps = 36/156 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TRE--PGGTPAAEAARHVLLSCGVDEFGAE 65
            EG+ GAGKT     +   LQR+ Y V    RE    G P              +     
Sbjct: 43  IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYSGDPTTGKPVD---GPADERVADR 95

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     A     H+ +V       GK+  ++ DR   S  ++      +   F+D     
Sbjct: 96  S-----AWVHAHHIWDV-------GKVRAMIVDR--RSLISFFCGGCRNLPRFVDWF--- 138

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                  D    LD+ +D   +R+  R         
Sbjct: 139 -------DAVFELDVDLDTLKRRLAARPEDEYGGRP 167


>gi|171912477|ref|ZP_02927947.1| hypothetical protein VspiD_14895 [Verrucomicrobium spinosum DSM
           4136]
          Length = 179

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 21/116 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I   G   +GKTT    L R L+R+ Y V           +E+AR VL S  +DE  +
Sbjct: 1   MWIVITGAPSSGKTT----LLRELKRRGYAVV----------SESAREVLESGELDESRS 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + + ++    R    E  I P    G++++ DR L  S AY+          L +L
Sbjct: 47  DVQTLI--EERQQAKEQQIPP----GQVIVLDRALPDSLAYRRLG-GLDASDLRAL 95


>gi|323489030|ref|ZP_08094267.1| hypothetical protein GPDM_06795 [Planococcus donghaensis MPA1U2]
 gi|323397422|gb|EGA90231.1| hypothetical protein GPDM_06795 [Planococcus donghaensis MPA1U2]
          Length = 177

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 68/209 (32%), Gaps = 36/209 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   + I+   I G GKTT +  L   L     +     E            +      +
Sbjct: 4   MKRPIVIAIASISGGGKTTIVEKLNEELPNS--EALYFDEYDLEGPENVIDWMNRGANYN 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E+                V   I   L           LD  ++YQ       H F++  
Sbjct: 62  EWN----LTPIVKDLEKLVTKPIDYIL-----------LDFPFSYQHA---QTHSFIN-- 101

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179
                       +  +D P+DI L R   R   +E +  D  E      + + RQ +L+ 
Sbjct: 102 -----------VSFFIDTPLDIALARRTIR-DFQEGSKEDIIEAM-AHYNSQGRQAYLEM 148

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           ++  +PD   I+D + S   +   IL  V
Sbjct: 149 LSTIKPDADFIIDGSQSVARIVRLILEKV 177


>gi|289192350|ref|YP_003458291.1| shikimate kinase [Methanocaldococcus sp. FS406-22]
 gi|288938800|gb|ADC69555.1| shikimate kinase [Methanocaldococcus sp. FS406-22]
          Length = 177

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 61/206 (29%), Gaps = 58/206 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I+  G  G GKTT   +L + L      V            E  +   L S   ++  + 
Sbjct: 3   IAITGTPGVGKTTVSKILGKKL---GIKVI--------DITEIVKKYKLYSEKDEDMDSY 51

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                      + +E  I     + K ++ D  +                          
Sbjct: 52  VIDF-------EKLEKFIDEIEEKEKTIILDGHV-------------------------S 79

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ- 184
             + PD  I+L    +I  +R++ R    +             + E  +   LD+   + 
Sbjct: 80  HLLNPDYIIVLRCNPEIIKERLEKRGYKPKK------------VLENVQAEILDVCLCES 127

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVW 209
             + + +D+     + +   I+  + 
Sbjct: 128 KGKVYEIDTTNRDVEDIVNEIIEAIK 153


>gi|269969373|sp|P0CB89|NDUAA_PONAB RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 10, mitochondrial; AltName: Full=Complex I-42kD;
           Short=CI-42kD; AltName: Full=NADH-ubiquinone
           oxidoreductase 42 kDa subunit; Flags: Precursor
 gi|55729768|emb|CAH91612.1| hypothetical protein [Pongo abelii]
          Length = 355

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|56552214|ref|YP_163053.1| hypothetical protein ZMO1318 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|260752278|ref|YP_003225171.1| nucleoside triphosphate hydrolase domain protein [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|56543788|gb|AAV89942.1| conserved predicted protein with nucleoside triphosphate hydrolase
           domain [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258551641|gb|ACV74587.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 240

 Score = 44.6 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 74/237 (31%), Gaps = 45/237 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------------VTREPGGTPAAEAARH 52
            I+  G +G+GKTT    L  +LQ                    + R P      +    
Sbjct: 14  LIALVGADGSGKTTVGQELLEWLQTMRPTAFCHLGKQTGNWGRAIARMPFVGRKLDKQVI 73

Query: 53  VLLSCGVDEFGAEA---EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------- 101
              S   DE GA A     I   + R       +R    +G ++L DR+  +        
Sbjct: 74  ARSSKARDEKGAGATVSIVIFALSMRRVFRFLRMRRLHRKGFMILTDRYPQAVVPGPMDG 133

Query: 102 --SYAYQGERDSSQHLF--LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               A   +   ++ L     +L +  +    PD  I L++ ++  LKR          A
Sbjct: 134 PGLVARNPKGMIARFLTGREQALYDW-MASYKPDIVIRLNVDLETALKR----KPDHRPA 188

Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            L+           K R +        P     +DS      V       + +++ +
Sbjct: 189 SLER----------KVRDVPRLSFNGAP--ILDLDSREPLDQVIGKAKAAILDVIAR 233


>gi|270208546|ref|YP_003329317.1| sulfate adenylate transferase subunit 1 [Sinorhizobium meliloti]
 gi|76880820|gb|ABA55990.1| sulfate adenylate transferase subunit 1 [Sinorhizobium meliloti]
          Length = 636

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 35/144 (24%)

Query: 7   IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I  F G+ G+GK+T  +LL++ L  +    +                 +L       G  
Sbjct: 465 IVWFTGLSGSGKSTVANLLEKRLTAEGKHAY-----------------ILDGDNVRHGLN 507

Query: 66  AEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +     AAR++    V  V R     G I++      S +A +          +  L+ 
Sbjct: 508 KDLGFTDAARVENIRRVAEVARLMADAGLIVIV--SFISPFANERRIAREIAANIRFLEA 565

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146
                        +D P+++   R
Sbjct: 566 ------------YVDTPLEVCEAR 577


>gi|75908882|ref|YP_323178.1| adenylate kinase [Anabaena variabilis ATCC 29413]
 gi|75702607|gb|ABA22283.1| Adenylate kinase [Anabaena variabilis ATCC 29413]
          Length = 184

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 69/209 (33%), Gaps = 34/209 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             +   G  G+GK+T    L   L         T         E  R  +    + E G 
Sbjct: 2   RLVVL-GGSGSGKSTQAQRLCSHL---GITQIST--------GEILREAI--SHLSELGR 47

Query: 65  EAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           +A+  +     +  + +  +IR  L +    + D ++   Y     +       LD L  
Sbjct: 48  QAQPYMVKGELVPDEMIIELIRLRLKKFD--VSDGWVLEGYPRTAFQAEELDFLLDEL-- 103

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179
                   D  I L +P  + + R   R    +    +  +R+  + +++     + +  
Sbjct: 104 ----GQKLDWAIYLQVPEAVMVSRSLGRSLPDDQ--PEIVQRRVEIFYDRTVPILEYYDR 157

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  R   ++   + + V  NIL ++
Sbjct: 158 R-----RRLLTINGDQAPELVLQNILKLL 181


>gi|324526813|gb|ADY48716.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10
           [Ascaris suum]
          Length = 245

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 48/119 (40%), Gaps = 9/119 (7%)

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
            +     + +  A     +F   R D   N +   L  G+ ++ +R   S + +     +
Sbjct: 35  EMFYKDPMSDMSAVMRDRIFN-CRFDQYLNAVAHILNTGQGVVLERSPHSDFVFANAMRA 93

Query: 112 SQHLFLDS------LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
             ++  +       +++ ++ ++   P   + LD PV + L+ ++   ++ + + LD  
Sbjct: 94  KNYIGPEYFKHYFYVRKTALPKLHFWPHLVVYLDAPVSVCLQNIRKEGNVNKVSVLDEI 152


>gi|229586988|ref|YP_002845489.1| adenylate kinase [Rickettsia africae ESF-5]
 gi|259494016|sp|C3PP86|KAD_RICAE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|228022038|gb|ACP53746.1| Adenylate kinase [Rickettsia africae ESF-5]
          Length = 212

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +                   +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKI-----------NLPHIAIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  +L  +    + Y   G   + +       +   
Sbjct: 45  EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KR+  RYS +    +                      DY 
Sbjct: 101 KEKIK---IIYFDVSDELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +  + +KR +++      +          +IV+ + S Q +  +I  I+ 
Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKSEQEIEIDIQKILK 210


>gi|325270190|ref|ZP_08136797.1| hypothetical protein HMPREF9141_2007 [Prevotella multiformis DSM
           16608]
 gi|324987491|gb|EGC19467.1| hypothetical protein HMPREF9141_2007 [Prevotella multiformis DSM
           16608]
          Length = 375

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 9/108 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V +  E     +     ++  +    
Sbjct: 19  MKR---IVLTGGPCAGKTTALVKVIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNRAFF 75

Query: 61  EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A  E  +    R   +   I+       I++CDR      AY 
Sbjct: 76  YEGEKATLETQLDLEDRFTRMAETIK----TPTIIVCDRGTMDISAYM 119


>gi|321473657|gb|EFX84624.1| hypothetical protein DAPPUDRAFT_99663 [Daphnia pulex]
          Length = 236

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 36/226 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFGA 64
           +  EG  G+GKTT ++   ++      DV V +EP          ++  LL      +  
Sbjct: 10  VVIEGNIGSGKTTLLNYFSKY-----RDVEVLQEPVEKWRNVDGHNLLSLLYDDPARWSL 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS----- 119
             +  V       H +          K+ L +R L S   Y    +  +   ++      
Sbjct: 65  TFQTHVQLTMLDHHTKET------SAKVKLMERSLFSGR-YCFVENLHESKLMEPAEYAV 117

Query: 120 LQEISVQEVM-----PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF----ERKDVMI 169
           + E     +       D  + L    ++  KR+  R    E    L Y     E  +  +
Sbjct: 118 ISEWFKWIIKNVDVEVDLIVYLRSDPEVVHKRILQRARKEEKTVPLSYIVALHEIHEDWL 177

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           H K        +   P     +D+      +   I  +  +++ ++
Sbjct: 178 HHKV-------SHPVPAPVLEIDANVDLTEMLKQISLVENQILNRK 216


>gi|189183972|ref|YP_001937757.1| adenylate kinase [Orientia tsutsugamushi str. Ikeda]
 gi|254807000|sp|B3CT26|KAD_ORITI RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|189180743|dbj|BAG40523.1| adenylate kinase [Orientia tsutsugamushi str. Ikeda]
          Length = 214

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 61/239 (25%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           M   L + F G  G+GK T  SLL       +   V  T     T  A+  +  + S  +
Sbjct: 1   MRISLILVFIGPPGSGKGTQASLLSEKFSIISVGKVLRTVMESNTAEADVVKKFIKSGKL 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                    IV  A             + + K ++ D +          RD  Q  FL  
Sbjct: 61  VP-SNITNKIVVNA----------LKNIDQCKSIILDGY---------PRDIFQADFLQE 100

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------------K 165
             ++  +       +  D+   + L+R+  R S  +   +  + +               
Sbjct: 101 NLQMDFK------VLFFDIDDAVVLRRLSGRISCTDCGTI--YNKLYCMPKINGVCDICN 152

Query: 166 DVMIHEKR---------R-QIF-------LDIARNQPDRCHIVDSAHSFQSVATNILNI 207
                 +          R + +       L+  + Q D+  ++D+  S +++   I  I
Sbjct: 153 SSSFQNRVDDDESIIKLRLESYKKETLPLLEFYKAQ-DKLTLIDANQSTENILKKIKKI 210


>gi|197102140|ref|NP_001126546.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial [Pongo abelii]
 gi|55731865|emb|CAH92642.1| hypothetical protein [Pongo abelii]
          Length = 390

 Score = 44.2 bits (104), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 + ++ +++ + + P   I +D+PV    +R+Q +    E
Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226


>gi|92113810|ref|YP_573738.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Chromohalobacter salexigens DSM 3043]
 gi|91796900|gb|ABE59039.1| adenylylsulfate kinase [Chromohalobacter salexigens DSM 3043]
          Length = 638

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 28/107 (26%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G  I F G+ G+GK+T  + L+  L R+ Y                   +LL      
Sbjct: 469 HAGKCIWFTGLSGSGKSTLANALEVELNRRGYHT-----------------MLLDGDNIR 511

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL--------CDR 97
            G   +  +  A R +++     + +     G I++         DR
Sbjct: 512 HGLCKDLAMSEADRTENIRRVGEIAKLFADAGIIVITAFISPFRSDR 558


>gi|282866217|ref|ZP_06275264.1| 3-dehydroquinate synthase [Streptomyces sp. ACTE]
 gi|282559001|gb|EFB64556.1| 3-dehydroquinate synthase [Streptomyces sp. ACTE]
          Length = 548

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 50/226 (22%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           SG  I   G  G GK+T   LL   L    +  + DV  T       A +A   +    G
Sbjct: 2   SGPLIVLVGPMGVGKSTVGELLAERLGTTYRDTDADVVAT-------AGKAIAEIFFDEG 54

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            + F              +     +R A+     +L            G           
Sbjct: 55  EEHF-------------RELERRAVREAVERHTGVLA----------LGGGAVLDAETR- 90

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                ++    P     L + V+  ++RV    +    A      R+   + + RR ++ 
Sbjct: 91  -----ALLAGRP--VAYLAMDVEEAVRRVGLNTARPLLAVNPR--RQWRELMDARRHLYE 141

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           ++A     R  +     + + VA  +L+ + EL++    P++S ++
Sbjct: 142 EVA-----RTTVATDERTPEEVAQAVLDAL-ELLEAVAEPVASGRE 181


>gi|54660021|gb|AAV37189.1| cytoplasmic dynein heavy chain 2 protein [Tetrahymena thermophila]
          Length = 4236

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G GKTT    LK+  ++    V      P   P     R  LL    ++    
Sbjct: 1951 VVLVGPSGCGKTTIWKTLKKAYEKMGTQVKAYVMNPKSMP-----RSQLLGLMNNDTREF 2005

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             E ++ ++AR      VI+ +      ++CD                   +++SL  +
Sbjct: 2006 TEGVLTSSAR-----EVIKESSDVISWIICD-------------GDIDPEWIESLNSV 2045


>gi|148226011|ref|NP_001088163.1| hypothetical protein LOC494987 [Xenopus laevis]
 gi|54035098|gb|AAH84070.1| LOC494987 protein [Xenopus laevis]
          Length = 263

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 82/242 (33%), Gaps = 41/242 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG   AGK+T +++LK+  +   +DV    + R        +    +         L
Sbjct: 24  ISIEGNIAAGKSTFVNILKKANEE--WDVVPEPIARWCNIQSCKDEFEELTTSQKSGGNL 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         ++    P L   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQSYACLSRIRAQLKALGGKLKEAENPVLFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +      ++  D  I L    +  L RV  R    E    
Sbjct: 142 YEAECMNETEWTVYQDWHDWMNSQFGADLELDGIIYLRAIPEKCLNRVYTRGREEEQGIP 201

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSA---HSFQSVATNILNIVWE 210
           ++Y E+     +  + H   R  F  + +  P     +D        +    +++  V E
Sbjct: 202 MEYLEKLHYKHETWLHHRTLRTDFEYL-QEIP--ILTLDVNEDFRDNKQKQESLIEKVKE 258

Query: 211 LV 212
            +
Sbjct: 259 FL 260


>gi|323449759|gb|EGB05645.1| hypothetical protein AURANDRAFT_54579 [Aureococcus anophagefferens]
          Length = 231

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 35/105 (33%), Gaps = 6/105 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVDEF 62
           I   G   AGKTT +S L   L    +DV V  E         A      V    G +  
Sbjct: 62  IVITGGPCAGKTTAMSKLSLRLTNMGFDVFVVPELATLTITGGASPGSYDVAQHVGWETA 121

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
               +  +      + +   +   L    +LLCDR      AY G
Sbjct: 122 ILREQ--MHLEDCFEEIAAKVSLPLGRHAVLLCDRGTMDVLAYVG 164


>gi|254383587|ref|ZP_04998937.1| bifunctional shikimate kinase/3-dehydroquinate synthase
           [Streptomyces sp. Mg1]
 gi|194342482|gb|EDX23448.1| bifunctional shikimate kinase/3-dehydroquinate synthase
           [Streptomyces sp. Mg1]
          Length = 172

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 41/209 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G+GK+T   LL   L         T     T        + +  G  
Sbjct: 1   MNRGPLIVLVGPMGSGKSTVGELLAERL---GVPYRDTDADIVTATGREISDLFIDEGEP 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F              +     +  A+ E   +L            G          + L
Sbjct: 58  HF-------------RELERRAVAAAVAEHTGVLS----------LGGGAVLDGGTRELL 94

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             + V          L + V+  ++RV    +    A      R+   + E RR ++ ++
Sbjct: 95  AGLPVA--------YLSMDVEEAVRRVGLGAARPLLAVNPR--RQWRELMEARRHLYTEV 144

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           A     R  +     + + VA  +L+ + 
Sbjct: 145 A-----RVVVATDERTPEEVAQAVLDALE 168


>gi|118405184|ref|NP_001072968.1| dihydroxyacetone kinase 2 [Gallus gallus]
 gi|53133474|emb|CAG32066.1| hypothetical protein RCJMB04_17b6 [Gallus gallus]
 gi|194303492|gb|ACF41169.1| deoxyadenosine kinase [Gallus gallus]
          Length = 265

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 62/189 (32%), Gaps = 36/189 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV----------HVTREPGGTPAAEAARH--VL 54
           IS EG   AGK+T + LL++      ++V            T E      + + +    L
Sbjct: 27  ISIEGNIAAGKSTLVRLLEKH--SDEWEVIPEPIAKWCNIQTSEDECKELSTSQKSGGNL 84

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI--------LLCDRFLDSS 102
           L    D+    A      A     R       I   L E +         +  DR++ +S
Sbjct: 85  LQMLYDKPTRWAYTFQTYACLSRVRAQL--KPISAKLHEAEHPVQFFERSVYSDRYVFAS 142

Query: 103 YAYQGERDSSQHLFLDS------LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
             ++    +     +        L +    E+  D  I L       ++R+Q R    E 
Sbjct: 143 NLFESGNINETEWAIYQDWHSWLLNQF-QSEIELDGIIYLRTTPQKCMERLQKRGRKEEE 201

Query: 157 A-CLDYFER 164
              L+Y E 
Sbjct: 202 GIDLEYLEN 210


>gi|71745092|ref|XP_827176.1| adenylate kinase [Trypanosoma brucei TREU927]
 gi|70831341|gb|EAN76846.1| adenylate kinase, putative [Trypanosoma brucei]
 gi|261331391|emb|CBH14385.1| adenylate kinase, putative [Trypanosoma brucei gambiense DAL972]
          Length = 200

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 62/235 (26%), Gaps = 70/235 (29%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F    G  G+GK T  + L        Y            A +  R        +     
Sbjct: 10  FFVL-GGPGSGKGTVCARLVEEF---GY--------THFSAGDLLRQASRDKTTE----- 52

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL------------LCDRFLDSSYAYQGERDSSQ 113
                        V   I   L+EG I+            L        Y   G      
Sbjct: 53  -------------VAQKISQILVEGGIVPSELTVALLKNALNTHPSPRGYVIDGFPRKMD 99

Query: 114 HLFLDSLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            +F+        ++++P    +  D   +    R+  R S       D  E         
Sbjct: 100 QMFMFE------EDIVPAKAILFFDCTEETMEARLIGRASSGSGRDDDNIE--------T 145

Query: 173 RRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIV----WELVQK 214
            R+ F   A           +  R + VD   S + V  ++  I      EL++K
Sbjct: 146 IRRRFRTNAEQCVPVVEHYKKQGRLYTVDGNRSREEVYADVKKIFLKEGEELLKK 200


>gi|16130884|ref|NP_417458.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|26249552|ref|NP_755592.1| ATP-binding protein yghR [Escherichia coli CFT073]
 gi|89109759|ref|AP_003539.1| hypothetical protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K-12 substr. W3110]
 gi|170018757|ref|YP_001723711.1| hypothetical protein EcolC_0709 [Escherichia coli ATCC 8739]
 gi|170082532|ref|YP_001731852.1| nucleoside triphosphate hydrolase domain-containing protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|191167533|ref|ZP_03029345.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|194436748|ref|ZP_03068848.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|238902102|ref|YP_002927898.1| hypothetical protein BWG_2702 [Escherichia coli BW2952]
 gi|253772177|ref|YP_003035008.1| hypothetical protein ECBD_0754 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162938|ref|YP_003046046.1| hypothetical protein ECB_02860 [Escherichia coli B str. REL606]
 gi|300916909|ref|ZP_07133612.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300923641|ref|ZP_07139669.1| hypothetical protein HMPREF9548_01834 [Escherichia coli MS 182-1]
 gi|300950812|ref|ZP_07164698.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300958365|ref|ZP_07170506.1| hypothetical protein HMPREF9547_04079 [Escherichia coli MS 175-1]
 gi|301643650|ref|ZP_07243691.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|307139674|ref|ZP_07499030.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli H736]
 gi|309794095|ref|ZP_07688520.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|312972754|ref|ZP_07786927.1| uncharacterized ATP-binding protein yghR [Escherichia coli 1827-70]
 gi|331643685|ref|ZP_08344816.1| hypothetical ATP-binding protein YghR [Escherichia coli H736]
 gi|54040235|sp|P64573|YGHR_ECOL6 RecName: Full=Uncharacterized ATP-binding protein yghR
 gi|54042400|sp|P64572|YGHR_ECOLI RecName: Full=Uncharacterized ATP-binding protein yghR
 gi|26109960|gb|AAN82165.1|AE016766_253 Hypothetical ATP-binding protein yghR [Escherichia coli CFT073]
 gi|882513|gb|AAA69151.1| ORF_f252; was ORF_f87p and ORF_f234p before splice [Escherichia
           coli str. K-12 substr. MG1655]
 gi|1789357|gb|AAC76020.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675792|dbj|BAE77045.1| hypothetical protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K12 substr. W3110]
 gi|169753685|gb|ACA76384.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
 gi|169890367|gb|ACB04074.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K-12 substr. DH10B]
 gi|190902390|gb|EDV62127.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|194424230|gb|EDX40217.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|238863053|gb|ACR65051.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BW2952]
 gi|242378540|emb|CAQ33326.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BL21(DE3)]
 gi|253323221|gb|ACT27823.1| hypothetical protein ECBD_0754 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974839|gb|ACT40510.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli B str. REL606]
 gi|253978994|gb|ACT44664.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BL21(DE3)]
 gi|284923011|emb|CBG36103.1| conserved hypothetical protein [Escherichia coli 042]
 gi|300314949|gb|EFJ64733.1| hypothetical protein HMPREF9547_04079 [Escherichia coli MS 175-1]
 gi|300415879|gb|EFJ99189.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300420082|gb|EFK03393.1| hypothetical protein HMPREF9548_01834 [Escherichia coli MS 182-1]
 gi|300449907|gb|EFK13527.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|301078034|gb|EFK92840.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|308122502|gb|EFO59764.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|309703420|emb|CBJ02759.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|310332696|gb|EFP99909.1| uncharacterized ATP-binding protein yghR [Escherichia coli 1827-70]
 gi|315614986|gb|EFU95624.1| uncharacterized ATP-binding protein yghR [Escherichia coli 3431]
 gi|323936011|gb|EGB32306.1| yghR protein [Escherichia coli E1520]
 gi|323960965|gb|EGB56584.1| gyghR [Escherichia coli H489]
 gi|331037156|gb|EGI09380.1| hypothetical ATP-binding protein YghR [Escherichia coli H736]
          Length = 252

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  DY E +D + +  K    +         +   +DS   +  V       V
Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239


>gi|310777987|ref|YP_003966320.1| guanylate kinase [Ilyobacter polytropus DSM 2926]
 gi|309747310|gb|ADO81972.1| guanylate kinase [Ilyobacter polytropus DSM 2926]
          Length = 184

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 38/187 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G      G  GAGK+T   L++R L+        TR P          + L      
Sbjct: 1   MKKGDLFVVSGPSGAGKSTVCKLVRRMLEINLAVSATTRAPRAGEVDGREYYFLTMEEFQ 60

Query: 61  EFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                 E + +A    ++   +++ +   L EGK ++                    L +
Sbjct: 61  NKIKNNEFLEYANVHGNYYGTLKSEVEERLNEGKNII--------------------LEI 100

Query: 118 DSLQEISVQEVM-----PDC-TIILDLPVDIGLK-RVQNRYSLRESACLDYFER--KDVM 168
           D         +      PD   I    P    L+ R++ R +  E       E   K++ 
Sbjct: 101 D-----VQGGIQAREEYPDVNLIFFKTPTKEDLEDRLRGRGTEDEETVRIRLENSLKELE 155

Query: 169 IHEKRRQ 175
             EK   
Sbjct: 156 F-EKYYD 161


>gi|304437417|ref|ZP_07397376.1| guanylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369673|gb|EFM23339.1| guanylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 197

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 68/224 (30%), Gaps = 38/224 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I   G  G GK T    L    +   + V  T        +   R         
Sbjct: 1   MKKGLLIVISGASGTGKGTVCKELLARERGVAFSVSAT--------SRTPREGEQDGREY 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    E     A            A +E   +  + +  +  A    R S+    L  +
Sbjct: 53  YFRTRTEFETMIA----------EGAFLEYADVYGN-YYGTPLAPIEARRSAGEDILLEI 101

Query: 121 Q---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                ++V E  PD T I  LP   +   +R+  R +  + +           I   RR 
Sbjct: 102 DTQGALNVMERCPDGTFIFLLPPSLEELRRRITGRGTESKESLARRLAAARDEIRLGRRY 161

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV-WELVQKRVSP 218
            +  +               + ++ A  I  I+  E ++  ++P
Sbjct: 162 RYAVL-------------NDTVENAAAQIQTILAAERLRADMNP 192


>gi|323168172|gb|EFZ53859.1| hypothetical protein SS53G_1653 [Shigella sonnei 53G]
          Length = 252

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  DY E +D + +  K    +         +   +DS   +  V       V
Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239


>gi|284163534|ref|YP_003401813.1| signal recognition particle-docking protein FtsY [Haloterrigena
           turkmenica DSM 5511]
 gi|284013189|gb|ADB59140.1| signal recognition particle-docking protein FtsY [Haloterrigena
           turkmenica DSM 5511]
          Length = 529

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 22/158 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L R+ + + Y   +    G T  A A   +      +  G + 
Sbjct: 334 IVFTGVNGVGKTTSIAKLSRYFEERGYSTVMA--NGDTYRAGANEQI--EQHAEALGTKL 389

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123
                       + + +  A      ++L D            R  +    +D L++I  
Sbjct: 390 ITHEQGGDPAAVLYDGVEYAEANDIDVVLGD---------TAGRLHTNEGLMDQLEKIDR 440

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160
            V    PD T+   +   +  +   NR     E+A +D
Sbjct: 441 VVG---PDMTLF--VDEAVAGQDAVNRAREFNEAAEID 473


>gi|302418534|ref|XP_003007098.1| thermosensitive gluconokinase [Verticillium albo-atrum VaMs.102]
 gi|261354700|gb|EEY17128.1| thermosensitive gluconokinase [Verticillium albo-atrum VaMs.102]
          Length = 1195

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 75/211 (35%), Gaps = 49/211 (23%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            M   + I   G  G+GK+T  ++L   L+               P  E    +L S    
Sbjct: 1018 MKKTVVIVA-GPCGSGKSTLAAVLSHKLK--------------VPFIEG--DLLHSRASV 1060

Query: 61   EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            E  A ++A +  A R   +E + + A+      + D   DS         + +  + D+L
Sbjct: 1061 EKMAASQA-LTDADRSAWLERLGKRAVET----ISDLGYDSVV---LSCSALRRPYRDAL 1112

Query: 121  QEISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            ++I  Q+V    TI LDL    ++   R   R      + L       V       +   
Sbjct: 1113 RQIVGQDVQ---TIFLDLQGEPELLAARTNGRVDHYMPSTL-------VDSQVAVYET-- 1160

Query: 179  DIARNQPDR----CHIVDSAHSFQSVATNIL 205
                  PD        +D+A + + VA+  L
Sbjct: 1161 ------PDVNEVDVLPLDAAPAPEEVASEAL 1185


>gi|229157231|ref|ZP_04285311.1| hypothetical protein bcere0010_34150 [Bacillus cereus ATCC 4342]
 gi|228626295|gb|EEK83042.1| hypothetical protein bcere0010_34150 [Bacillus cereus ATCC 4342]
          Length = 134

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 31/144 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 8   ISLQGPMASGKTT----LAKRLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 57  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112

Query: 116 FLDSLQEISVQEVMPDCTIILDLP 139
            L  L+E        D    LD+ 
Sbjct: 113 ELYKLRE-----CRSDAIFYLDVS 131


>gi|116872992|ref|YP_849773.1| dephospho-CoA kinase [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741870|emb|CAK20994.1| dephospho-CoA kinase [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 200

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 83/215 (38%), Gaps = 30/215 (13%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60
           G+ G+   GK+T  +++++    L   +       EPG    AE      + +LL+ G  
Sbjct: 6   GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVEPGTDGLAEIVAYFGKGILLTDGTL 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                AE I     + + +  +  P + E   +L +R       Y    +      +  L
Sbjct: 66  NRPKLAEQIFRNKEKREKLNEITHPRVKE--YMLAER-----KRYFEAGEKVVFFDIPLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E  ++ ++ D  I++    +  LKR+  R +L +   L     + + I EK        
Sbjct: 119 FESHLESLV-DQIIVVWTTPETELKRLMERNNLTKKDALARINSQ-MGIDEK-------- 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           A+       ++D+  S +     +L I+   V+ +
Sbjct: 169 AKKAD---FVIDNNESLEKTQKQVLAIIDRFVKNK 200


>gi|322695052|gb|EFY86867.1| glucokinase [Metarhizium acridum CQMa 102]
          Length = 224

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 47/208 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKTT    L   L                P  E     L     +     +   +
Sbjct: 54  GPAGCGKTTVAEHLANAL--------------DIPYIEGD---LYHPQSNIDKMSSGIPL 96

Query: 71  FAAARLDHVENVIRPAL------MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A R D +  + + A        +G ++ C        A + +      +     + + 
Sbjct: 97  TDADRWDWLTELRKQANSRIHDGAKGVVVAC-------SALKLKYRDVIRVAAYWDRSLI 149

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +        I L  P ++ LKRV  R      A      +    I E+ R+       ++
Sbjct: 150 IHF------IFLHAPAELLLKRVTARKGHYMGAN---MIKSQFDILERPRE-------DE 193

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
            D    VD++     V  + L  V  ++
Sbjct: 194 ID-VVTVDASREVDEVKEDALKKVKAMM 220


>gi|261749418|ref|YP_003257104.1| guanylate kinase [Blattabacterium sp. (Periplaneta americana) str.
           BPLAN]
 gi|261497511|gb|ACX83961.1| guanylate kinase (GMP kinase) [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 194

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 53/180 (29%), Gaps = 36/180 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-------RHV 53
           M  G  I   G  G+GKTT    L   +    + V  T  P                +  
Sbjct: 1   MKKGKMIILSGPSGSGKTTISKHLLSKITELKFSVSCTTRPIRNKEKHGIDYYFISTKKF 60

Query: 54  LLSCGVDEFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           +      +F    E    +F       +++ I     E K +L D             D 
Sbjct: 61  ISKIKKYQFAEWEEVYPKLFYGT----LKSEISKTWNENKHILFD------------VDV 104

Query: 112 SQHLFLDSLQEISVQEVMPD--CTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVM 168
              L L  L         PD   +I + +  ++I  +R+  R     S      E+  + 
Sbjct: 105 KGGLHLKKLY--------PDNSLSIFVLVHSIEILKERLLKRNYENFSKIKTRLEKASIE 156


>gi|20271368|gb|AAM18618.1|AF497801_1 adenylate kinase [Trypanosoma brucei]
          Length = 222

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 62/235 (26%), Gaps = 70/235 (29%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F    G  G+GK T  + L        Y            A +  R        +     
Sbjct: 32  FFVL-GGPGSGKGTVCARLVEEF---GY--------THFSAGDLLRQASRDKTTE----- 74

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL------------LCDRFLDSSYAYQGERDSSQ 113
                        V   I   L+EG I+            L        Y   G      
Sbjct: 75  -------------VAQKISQILVEGGIVPSELTVALLKNALNTHPSPRGYVIDGFPRKMD 121

Query: 114 HLFLDSLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            +F+        ++++P    +  D   +    R+  R S       D  E         
Sbjct: 122 QMFMFE------EDIVPAKAILFFDCTEETMEARLIGRASSGSGRDDDNIE--------T 167

Query: 173 RRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIV----WELVQK 214
            R+ F   A           +  R + VD   S + V  ++  I      EL++K
Sbjct: 168 IRRRFRTNAEQCVPVVEHYKKQGRLYTVDGNRSREEVYADVNKIFLKEGEELLKK 222


>gi|90961490|ref|YP_535406.1| deoxyguanosine kinase [Lactobacillus salivarius UCC118]
 gi|227890580|ref|ZP_04008385.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741]
 gi|90820684|gb|ABD99323.1| Deoxyguanosine kinase [Lactobacillus salivarius UCC118]
 gi|227867518|gb|EEJ74939.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741]
 gi|300214336|gb|ADJ78752.1| Deoxyguanosine kinase [Lactobacillus salivarius CECT 5713]
          Length = 240

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 35/212 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60
           I+  GI G+GK++   LL + L    +   VT  P       G   A   R        D
Sbjct: 2   ITLAGIIGSGKSSLTKLLSQELNTTPFFEPVTDNPVLPLFYKGNELAAKKRAA---GATD 58

Query: 61  EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYA 104
                   +  F   R      +I+ A+  G   + DR +                +   
Sbjct: 59  VTNPYTYLLQTFFLNRR---FKMIKEAM-RGDNNILDRSIYEDAMFMRMNTELGNATQIE 114

Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           YQ  ++  ++  LD + +++  +   D  I++ +     +KR++ R    E    D    
Sbjct: 115 YQIYQELLKN-MLDEI-KLATPKNHKDLMILIKVSYPTMIKRIEKRGREYEQVTNDP--- 169

Query: 165 KDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH 195
             V  +++  + + +  R        ++D   
Sbjct: 170 SLVDYYKRLLEFYDEWERTYDKSPLLVIDGDK 201


>gi|307594587|ref|YP_003900904.1| hypothetical protein Vdis_0453 [Vulcanisaeta distributa DSM 14429]
 gi|307549788|gb|ADN49853.1| hypothetical protein Vdis_0453 [Vulcanisaeta distributa DSM 14429]
          Length = 234

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 63/174 (36%), Gaps = 29/174 (16%)

Query: 1   MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLL 55
           MN  +G  I   G  G GK+T I  L   L  + + V    +    G           LL
Sbjct: 1   MNIGNGKLIVVLGPVGVGKSTVIRHLMAILNNRGFRVRREFIKSFHGPAYLLWVIMAKLL 60

Query: 56  SCGVDEFG----------AEAEAIVFAAARLDHVEN------VIRPALMEGKILLCDRFL 99
           +                   A  ++  +A +D   N      VI  + + G  ++ + +L
Sbjct: 61  NLPGKYAPWYLIPKSGRVKLASILMILSAYIDVFINVPIKLLVIFMSKVLGFTVVSEEYL 120

Query: 100 DSS-----YAYQ--GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            S      Y+Y   G R S   L +  L  + ++   PD T++L+      L+R
Sbjct: 121 PSMLFDYLYSYIDLGVRGSLSRLPIRVLLSMFIR-YRPDVTVVLNAGDAELLRR 173


>gi|288802578|ref|ZP_06408017.1| deoxynucleoside kinase family protein [Prevotella melaninogenica
           D18]
 gi|302346375|ref|YP_003814673.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella
           melaninogenica ATCC 25845]
 gi|288335106|gb|EFC73542.1| deoxynucleoside kinase family protein [Prevotella melaninogenica
           D18]
 gi|302150349|gb|ADK96610.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella
           melaninogenica ATCC 25845]
          Length = 204

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 30/195 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT  ++L    +R  +              +  + +        +    
Sbjct: 3   IAIAGNIGSGKTTLTTMLA---KRYGWKPRFESVDYNPYLEDYYKDI------KRWSFPM 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118
           E         D +E          + ++ DR +         ++YA     D     +++
Sbjct: 54  EVFFLKERFKDLLE-----ISRSDESVVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
             ++++     PD  I L   V   +  ++ R    E    LDY E        KR + F
Sbjct: 109 LFEDMTDAVQFPDLMIYLRASVSHLVSNIEKRGREYEQKMPLDYLEN-----LNKRYEEF 163

Query: 178 LDIARNQPDRCHIVD 192
           +        R   +D
Sbjct: 164 IK--EKYKGRVLTID 176


>gi|228928702|ref|ZP_04091738.1| hypothetical protein bthur0010_33960 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229123169|ref|ZP_04252375.1| hypothetical protein bcere0016_34590 [Bacillus cereus 95/8201]
 gi|228660262|gb|EEL15896.1| hypothetical protein bcere0016_34590 [Bacillus cereus 95/8201]
 gi|228831021|gb|EEM76622.1| hypothetical protein bthur0010_33960 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 195

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS  G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 8   ISLPGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDVNSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 57  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154


>gi|149598466|ref|XP_001515329.1| PREDICTED: similar to Cytidylate kinase, partial [Ornithorhynchus
           anatinus]
          Length = 171

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 26/150 (17%)

Query: 78  HVENVIRPALMEGKIL-------LCDRFLDSSYA--YQGERDSSQHLFL--DSLQEIS-V 125
               +I   + EGKI+       L  R +D + A   Q  +          D+LQ  +  
Sbjct: 23  QYGELIEKYIREGKIVPVEITISLLKREMDETMAANVQKSKFLIDGFPRNQDNLQGWNKT 82

Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
            E   D    +  D   ++ ++R   R      +  +    + +   EKR Q +L   + 
Sbjct: 83  MEGKADVAFVLFFDCDNEVCIERCLERGRSSGRSDDNR---ESL---EKRIQTYLQSTKP 136

Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207
                 +  +   VD++ S   V   ++ I
Sbjct: 137 IIDLYEKMGKVRKVDASKSVDEVFDRVVTI 166


>gi|330906300|ref|XP_003295423.1| hypothetical protein PTT_00912 [Pyrenophora teres f. teres 0-1]
 gi|311333295|gb|EFQ96476.1| hypothetical protein PTT_00912 [Pyrenophora teres f. teres 0-1]
          Length = 206

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 62/172 (36%), Gaps = 29/172 (16%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  GAGK+T +S L + +  +  + + H TR P GT       + +      +   
Sbjct: 20  IVISGPSGAGKSTILSRLFEEYPGKFGFSISHTTRGPRGTEQNGKEYYFVTKDEFQDLIE 79

Query: 65  E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +    E   F           +     +G+I + D                  + ++ ++
Sbjct: 80  KKGFVEHAQFGGNYYGTSVKAVNDIAEKGQICILD------------------IEMEGVK 121

Query: 122 EISVQ--EVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +++       P    +   P   +I  KR+++R + +E A L    +  V +
Sbjct: 122 QVANHPTFPRPR--FLFLQPPSMEILEKRLRSRATDKEEAILKRLNQAKVEM 171


>gi|301299696|ref|ZP_07205949.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852708|gb|EFK80339.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 238

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 35/212 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60
           I+  GI G+GK++   LL + L    +   VT  P       G   A   R        D
Sbjct: 2   ITLAGIIGSGKSSLTKLLSQELNTTPFFEPVTDNPVLPLFYKGNELAAKKRAA---GATD 58

Query: 61  EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYA 104
                   +  F   R      +I+ A+  G   + DR +                +   
Sbjct: 59  VTNPYTYLLQTFFLNRR---FKMIKEAM-RGDNNILDRSIYEDAMFMRMNTELGNATQIE 114

Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           YQ  ++  ++  LD + +++  +   D  I++ +     +KR++ R    E    D    
Sbjct: 115 YQIYQELLKN-MLDEI-KLATPKNHKDLMILIKVSYPTMIKRIEKRGREYEQVTNDP--- 169

Query: 165 KDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH 195
             V  +++  + + +  R        ++D   
Sbjct: 170 SLVDYYKRLLEFYDEWERTYDKSPLLVIDGDK 201


>gi|298491417|ref|YP_003721594.1| adenylate kinase ['Nostoc azollae' 0708]
 gi|298233335|gb|ADI64471.1| adenylate kinase ['Nostoc azollae' 0708]
          Length = 184

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 45/211 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T    L  FL   +     T         +  R  +         A+   
Sbjct: 6   FLGPPGAGKGTQAKNLAEFL---HIPHIST--------GDILRQAIKDQTPLGLKAQVYM 54

Query: 69  IVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEI 123
                     VE++++  L     +   +L D F          R  +Q  FL+  L  I
Sbjct: 55  DKGELVPDQLVEDLVKERLNQPDAQNGWIL-DGF---------PRKVTQAAFLEELLTTI 104

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
                  +  + LD P +  + R+  R    +S            +  +R +++ +    
Sbjct: 105 GQGG---EKVVNLDAPDETVISRLLGRGRKDDSE----------DVIRRRLEVYREETAP 151

Query: 180 IARNQPDRCHI--VDSAHSFQSVATNILNIV 208
           +      R  +  V+   S + V T + N++
Sbjct: 152 LIDYYGARHKLLTVNGNQSPEEVTTELQNLI 182


>gi|192360909|ref|YP_001983009.1| shikimate kinase [Cellvibrio japonicus Ueda107]
 gi|190687074|gb|ACE84752.1| shikimate kinase [Cellvibrio japonicus Ueda107]
          Length = 177

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 44/196 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T   LL + L +   D   T       A +    +L   G  +  A  E ++
Sbjct: 13  GMPGAGKSTIGLLLAKHLAK---DFVDTDLLIQLRAGKTLDDILREQGYLKLRALEEEVL 69

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            A    +HV          G  +  D                    +  L++       P
Sbjct: 70  LATDYPNHV------IATGGSAVYSD------------------KGMQHLKQFG-----P 100

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
              + LD+      +R+ N  +   +      +    +  E+ R +++  A        I
Sbjct: 101 --VVFLDVTQAELEQRIHNMETRGIAKHPS--QSFSDLFLER-RDLYMRYAD------VI 149

Query: 191 VDSA-HSFQSVATNIL 205
           +D    +   +A  I+
Sbjct: 150 IDGNHKTLDQLADEII 165


>gi|118378437|ref|XP_001022394.1| Dynein heavy chain family protein [Tetrahymena thermophila]
 gi|89304161|gb|EAS02149.1| Dynein heavy chain family protein [Tetrahymena thermophila SB210]
          Length = 4286

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G GKTT    LK+  ++    V      P   P     R  LL    ++    
Sbjct: 2011 VVLVGPSGCGKTTIWKTLKKAYEKMGTQVKAYVMNPKSMP-----RSQLLGLMNNDTREF 2065

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             E ++ ++AR      VI+ +      ++CD                   +++SL  +
Sbjct: 2066 TEGVLTSSAR-----EVIKESSDVISWIICD-------------GDIDPEWIESLNSV 2105


>gi|325294380|ref|YP_004280894.1| Guanylate kinase [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325064828|gb|ADY72835.1| Guanylate kinase [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 217

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 36/171 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I      G GKTT    L +      + V + TR+P            +     + 
Sbjct: 6   KGLLIVISAPSGTGKTTLSHKLLKTFPSMEFSVSYTTRKPRKGEVNGRDYFFVDKETFES 65

Query: 62  FGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
              E + +        ++  ++       +  AL +GK +L D  +D+  A Q +++   
Sbjct: 66  MIKEGDFLEWAEVYGNLYGTSKSQ-----VMKALEKGKDILLD--IDTQGALQVKKN--- 115

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                           P+  +I  LP       KR++ R +  E       
Sbjct: 116 ---------------FPEAVLIFILPPSLRELEKRLRKRGTDDEETIKKRL 151


>gi|312129039|ref|YP_003996379.1| deoxynucleoside kinase [Leadbetterella byssophila DSM 17132]
 gi|311905585|gb|ADQ16026.1| deoxynucleoside kinase [Leadbetterella byssophila DSM 17132]
          Length = 209

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 71/223 (31%), Gaps = 35/223 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT    L        ++V+     G            L+   D+    +
Sbjct: 3   IAITGNIGAGKTTLAEKLASHY---GWEVYYEAVDGNPY---------LAPFYDDMPLWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ-----GERDSSQHLFL 117
             +   F   R + V  +        K ++ DR  + D+    Q     G  + +     
Sbjct: 51  FHLQIFFLNTRFEQVLKIKE---RSDKTIIQDRTIYEDAYIFAQNLYESGHMNETDFTTY 107

Query: 118 DSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            SL    ++ +  PD  I L   +    K ++ R    E          D        ++
Sbjct: 108 KSLFNTIMRAISPPDLMIYLKADLPRLQKGIRKRGREYEQNI-------DPNYLLGLNEL 160

Query: 177 FLDIARNQPD-RCHIVDSAHSFQSVATNI-LNIVWELVQKRVS 217
           +   A+     +   +D       V        + +L++K ++
Sbjct: 161 YSKFAQQYHHGKFLEIDVN-DLDFVENEADFRKITDLLEKNIN 202


>gi|312962398|ref|ZP_07776889.1| sulfate adenylyltransferase, large subunit [Pseudomonas fluorescens
           WH6]
 gi|311283325|gb|EFQ61915.1| sulfate adenylyltransferase, large subunit [Pseudomonas fluorescens
           WH6]
          Length = 723

 Score = 44.2 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  + L+  L  + +                 R  +L      
Sbjct: 554 HKGKVIWFTGLSGSGKSTLANALELELHARGH-----------------RTYILDGDNVR 596

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +     A R++++     V +  +  G I+L 
Sbjct: 597 QGLNRDLGFTDADRVENIRRIAEVAKLMMDAGLIVLT 633


>gi|150400248|ref|YP_001324015.1| signal recognition particle-docking protein FtsY [Methanococcus
           vannielii SB]
 gi|150012951|gb|ABR55403.1| signal recognition particle-docking protein FtsY [Methanococcus
           vannielii SB]
          Length = 400

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 44/126 (34%), Gaps = 15/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI G GKTT IS L   L+ K Y   +    G T  A A     L       G       
Sbjct: 200 GINGTGKTTSISKLGYILKEKGYSAVMAA--GDTFRAGAIEQ--LDEHGKNTGIRVIKHQ 255

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             A     + + I  A   G  ++L D            R ++    +D +++  V+   
Sbjct: 256 KGADSAAVIYDAIEHAKARGINVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 305

Query: 130 PDCTII 135
           PD  I 
Sbjct: 306 PDLVIF 311


>gi|326790689|ref|YP_004308510.1| deoxyadenosine kinase [Clostridium lentocellum DSM 5427]
 gi|326541453|gb|ADZ83312.1| Deoxyadenosine kinase [Clostridium lentocellum DSM 5427]
          Length = 217

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 72/231 (31%), Gaps = 41/231 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + +   G+ G GKT+   LL         +V        +        +  +   +E   
Sbjct: 1   MLLVVGGMIGLGKTSVAELLGEHF---GTEVFY-----ESVDNNPILPLFYTSSEEEIEK 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGER 109
           +    +     LD     I+ AL     +L DR +                S   +Q   
Sbjct: 53  KRYPFLLQLHFLDTRFRSIKSALYHDNNVL-DRSIYEDWYFAKVNNDLGRISDLEFQMYD 111

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
               +  +  L+E+  +   PD  I L    +  L R+  R    E       + +    
Sbjct: 112 RLLDN-MMQELKELPKKA--PDLMIYLKGSFETVLSRIMKRGRSYE------LDAQLEAY 162

Query: 170 HEKRRQIFLD--IARNQPDRCHIVDSAHSFQSVAT-----NILNIVWELVQ 213
           + +  + + +  ++        ++D    +  V+       +L +V   ++
Sbjct: 163 YRQLWEGYDEWVMSHYHASEVVVIDMDR-YDVVSRREDALEVLALVESKLK 212


>gi|65319853|ref|ZP_00392812.1| COG0572: Uridine kinase [Bacillus anthracis str. A2012]
          Length = 198

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 55/222 (24%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56
           MN     I+   + G GKTT    L   L      ++  R       T   +        
Sbjct: 13  MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 65

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D    +   +      + H+   IR + ++  I+      D  +AY           
Sbjct: 66  --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 103

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R   R         D+ E     IH      
Sbjct: 104 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHY 149

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
               R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 150 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 191


>gi|282860313|ref|ZP_06269382.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
 gi|282586910|gb|EFB92146.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
          Length = 357

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 5/106 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V V  E     +     ++  +    
Sbjct: 1   MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFVIPEVPTLFSQAGMDYLTSNHQFF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A      A     +   I   +    I++CDR      AY 
Sbjct: 58  FEGEKATLETQIALEDQFMR--IAETIDRPTIIVCDRGTMDISAYM 101


>gi|149180080|ref|ZP_01858585.1| hypothetical protein BSG1_03655 [Bacillus sp. SG-1]
 gi|148852272|gb|EDL66417.1| hypothetical protein BSG1_03655 [Bacillus sp. SG-1]
          Length = 183

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189
           D ++ +D P+D+ + R   R    +++  D  E   +   +  R+ +L++ +  +PD   
Sbjct: 104 DVSVYIDTPLDVAMGRRILRDFSNDNSASDIQENIRL-YLDSGRRAYLEMEKTIKPDSDL 162

Query: 190 IVDSAHSFQSVATNILNIV 208
           ++D     + +  +I+ I+
Sbjct: 163 VIDGTLPVERIVESIVEIL 181


>gi|29840294|ref|NP_829400.1| adenylate kinase [Chlamydophila caviae GPIC]
 gi|33301220|sp|Q822Z1|KAD_CHLCV RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|29834642|gb|AAP05278.1| adenylate kinase [Chlamydophila caviae GPIC]
          Length = 214

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 35/158 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHV 53
           M + +F    G  G+GK T    L   L                +  P G+ AAE     
Sbjct: 1   MVNSIFYIIMGPPGSGKGTQSQRLANHLGLPHISSGDLFRSAIKSATPLGSKAAEYINKG 60

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           LL      +    E +              +P    G I+             G   +  
Sbjct: 61  LLVPDNLVWEIVQETLN-------------KPGCKSGCII------------DGFPRTLD 95

Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQNR 150
              L  L +  V+    D   I LD+  +  + R+ +R
Sbjct: 96  QAVL--LNDFLVKSNAADYRVIQLDVSAEEIISRIHSR 131


>gi|302690798|ref|XP_003035078.1| hypothetical protein SCHCODRAFT_74381 [Schizophyllum commune H4-8]
 gi|300108774|gb|EFJ00176.1| hypothetical protein SCHCODRAFT_74381 [Schizophyllum commune H4-8]
          Length = 318

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 36/212 (16%)

Query: 11  GIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  GAGK T  + L              +   +   G+   E  +  +    +       
Sbjct: 88  GGPGAGKGTQCAKLVEEFGFCHLSAGDLLRAEQNREGSQYGELIKTCIKEGKIVPMEVTI 147

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + +     AA  +  E        +GK     RFL   +  + ++       +       
Sbjct: 148 KLLENAMGAAMKEAREGE---GWQDGKG----RFLIDGFPRKMDQALKFDESVCECS--- 197

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLD 179
                    +  D   ++ L+R+  R   S R+   ++  +++    HE        +  
Sbjct: 198 -------LVLFFDTTEEVMLERLLERGKTSGRDDDNVESIKKRFRTYHETTMPVIDHYKS 250

Query: 180 IARNQPDRCHIVDSAHSFQSV---ATNILNIV 208
           +      +  +VDS+     V   A  +   V
Sbjct: 251 L-----GKVAVVDSSAPVDEVYKGAAEVARKV 277


>gi|159900921|ref|YP_001547168.1| adenylate kinase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893960|gb|ABX07040.1| adenylate kinase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 223

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 74/240 (30%), Gaps = 62/240 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I F G  GAGK+T  + L   L           +  T E  G+   +    V+    + 
Sbjct: 6   LILF-GPPGAGKSTQAAYL-DKLAAIDSISTGQRLRQTVE-TGSELGQEVAQVMAEGRLV 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     + +           N     +     +L D +          R  SQ   LD L
Sbjct: 63  DDTLMNKLL-----------NEWLLGIPSEVGVLLDGY---------PRTLSQAQSLDQL 102

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-------------------- 160
            +   + +  D  I L L  +  ++R+  R   R     D                    
Sbjct: 103 MQTISRPL--DVVIALTLSDEEAIRRLSGRRICRIKGQPDQILHINDQAALDACRANGGM 160

Query: 161 YFERKDV--MIHEKRRQIFLDIARNQP------DR--CHIVDSAHSFQSVATNILNIVWE 210
             ER D      ++R   +   A+ +P      +R    ++D+  +   V+  I   + +
Sbjct: 161 LIERDDDKPETIKRRLAEYN--AKTEPLLQFYGERDLLILIDADGTPDQVSKAIEQALQQ 218


>gi|12045243|ref|NP_073054.1| uridine kinase [Mycoplasma genitalium G37]
 gi|255660407|ref|ZP_05405816.1| uridine kinase [Mycoplasma genitalium G37]
 gi|1351377|sp|P47622|URK_MYCGE RecName: Full=Uridine kinase; AltName: Full=Cytidine
           monophosphokinase; AltName: Full=Uridine
           monophosphokinase
 gi|3844971|gb|AAC71609.1| uridine kinase [Mycoplasma genitalium G37]
 gi|166078977|gb|ABY79595.1| uridine kinase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 213

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 29/177 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ ++  G   +GKTT   ++ + L +K     + ++            +L    ++  
Sbjct: 4   KGILVAISGGSCSGKTTVAEMIYQLLSKKLKVAIICQDNYYKSYKNKP--LLKRKTINFD 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDS 119
             +       A     + + I   L  G I+   L D        Y     + +   +  
Sbjct: 62  HPD-------AFDWKLLRSHIEDLL-NGSIVNVPLYD--------YINYTRAKKTAKIGP 105

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  + ++ +MP      D      L R+       E+   +   R+     ++ R I
Sbjct: 106 IDVVILEGLMP----WFD----EKLSRLSKLKIFIETNGEERLIRRIERDWQRGRNI 154


>gi|241788753|ref|XP_002414466.1| cytoplasmic dynein heavy chain, putative [Ixodes scapularis]
 gi|215508677|gb|EEC18131.1| cytoplasmic dynein heavy chain, putative [Ixodes scapularis]
          Length = 260

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  G+GKTT   LL   L+     VH     P   P     R  LL     +    
Sbjct: 23  VVLVGPSGSGKTTLCRLLLHALRHAGEIVHTHILNPKAMP-----RQQLLGHIDVDTREW 77

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + ++ A+AR      VI+  L     ++CD                   +++SL  +
Sbjct: 78  HDGVLTASAR-----QVIKEPLGVRSWIICD-------------GDIDPEWIESLNSV 117


>gi|172039504|ref|YP_001806005.1| guanylate kinase [Cyanothece sp. ATCC 51142]
 gi|171700958|gb|ACB53939.1| guanylate kinase [Cyanothece sp. ATCC 51142]
          Length = 189

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 56/175 (32%), Gaps = 26/175 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M SG  I   G  G GK T +  L          +   TR P          + L     
Sbjct: 1   MASGKLIVLTGPSGVGKGTLVRALLNHHPELYLSISATTRSPRQGEVEGKDYYFLSKSAF 60

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +    E + +    +A          +   + +G I+L                    L 
Sbjct: 61  ETMIEENQLLEWAEYAGNYYGTPRTKVEEKINQGLIVL--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           ++ +   +++   PD   I  LP   +    R+++R +  ESA L   +R    +
Sbjct: 101 IEVIGAKAIKNSFPDALRIFILPPSIEELEHRLRSRKTDSESAILRRLDRAKEEL 155


>gi|302878396|ref|YP_003846960.1| adenylylsulfate kinase [Gallionella capsiferriformans ES-2]
 gi|302581185|gb|ADL55196.1| adenylylsulfate kinase [Gallionella capsiferriformans ES-2]
          Length = 203

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 36/149 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T    ++  L +K                   R  +L      
Sbjct: 28  HRGAIIWFTGLSGSGKSTLAHAVEEALHQKGC-----------------RTFVLDGDNVR 70

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +     A R++++     V +  +  G I+L                S      +
Sbjct: 71  HGLCGDLGFSDAGRVENIRRVGEVAKLFMEAGIIVLT------------AFISPYRADRE 118

Query: 119 SLQEISVQEVMPDCT-IILDLPVDIGLKR 146
            ++ +  +    D   I  D P+++   R
Sbjct: 119 RVRSMVKEG---DFIEIYCDTPIEVCESR 144


>gi|120437753|ref|YP_863439.1| guanylate kinase [Gramella forsetii KT0803]
 gi|117579903|emb|CAL68372.1| guanylate kinase [Gramella forsetii KT0803]
          Length = 195

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M+ G  I F    G+GKTT +  L   + L+        +REP G        + L    
Sbjct: 1   MSEGKLIVFSAPSGSGKTTIVRHLLKHQELKLDFSISATSREPRGNEVHGKDYYFLSLHD 60

Query: 59  VDEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96
             +     E +    V+       +++ +     +GK ++ D
Sbjct: 61  FKQKIKNDEFLEWEEVYRDNFYGTLKSEVERIWKKGKHVIFD 102


>gi|326513906|dbj|BAJ92103.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 149

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 27/148 (18%)

Query: 95  CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
             R      A  G   SSQ + L++L       + PD  I+LD+P ++ ++RV  R    
Sbjct: 8   ATRCSGKGLALDGYPRSSQAMALETL------GIRPDIFILLDVPDELLVERVVGRRLDP 61

Query: 155 ESACL--------------DYFERKDVMIHEKR-------RQIFLDIARNQPDRCHIVDS 193
           E+  +                  ++     EK         Q    +     D    V  
Sbjct: 62  ETGKIYHLKYSPPENEEIASRLTQRFDDTEEKVKLRLQTHYQNIESLVSIYEDVIVKVKG 121

Query: 194 AHSFQSVATNILNIVWELVQKRVSPLSS 221
             + + V   I  ++   + K+   ++S
Sbjct: 122 DTTVEDVFGEIDKLLTSSLDKKTEMVAS 149


>gi|325860332|ref|ZP_08173454.1| deoxynucleoside kinase [Prevotella denticola CRIS 18C-A]
 gi|327313475|ref|YP_004328912.1| deoxynucleoside kinase [Prevotella denticola F0289]
 gi|325482211|gb|EGC85222.1| deoxynucleoside kinase [Prevotella denticola CRIS 18C-A]
 gi|326944956|gb|AEA20841.1| deoxynucleoside kinase [Prevotella denticola F0289]
          Length = 204

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 64/195 (32%), Gaps = 30/195 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT  ++L    +R  +              +  + +        +    
Sbjct: 3   IAIAGNIGSGKTTLTTMLA---RRYGWKPRFESVDYNPYLEDYYKDI------KRWSFPM 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118
           E         D +E  IR +      ++ DR +         ++YA     D     +++
Sbjct: 54  EVFFLKERFKDLLE--IRQSKES---VVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177
             ++++     PD  I L   V   +  ++ R    E    LDY E  +    E  R  +
Sbjct: 109 LFEDMTDAVRFPDLMIYLRSSVSHLVSNIEKRGREYEQKMPLDYLESLNRRYDEFIRDKY 168

Query: 178 LDIARNQPDRCHIVD 192
                    R   +D
Sbjct: 169 -------KGRVLTID 176


>gi|260447974|gb|ACX38396.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|315137581|dbj|BAJ44740.1| hypothetical protein ECDH1ME8569_2884 [Escherichia coli DH1]
          Length = 252

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  DY E +D + +  K    +         +   +DS   +  V       V
Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239


>gi|196038496|ref|ZP_03105805.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196030904|gb|EDX69502.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 192

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 31/143 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 54  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109

Query: 116 FLDSLQEISVQEVMPDCTIILDL 138
            L  L+E        D    LD+
Sbjct: 110 ELYKLRE-----CRSDAIFYLDV 127


>gi|119484813|ref|ZP_01619295.1| adenylate kinase [Lyngbya sp. PCC 8106]
 gi|119457631|gb|EAW38755.1| adenylate kinase [Lyngbya sp. PCC 8106]
          Length = 193

 Score = 44.2 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 44/217 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + F G  G+GK T  + L  FL   +    D+  T     T   + A+  +      +  
Sbjct: 4   VIFLGPPGSGKGTQSARLSEFLAVPHISTGDILRTHVAQQTDLGQKAKAFM---DQGDLV 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCD---R------FLDSSYAYQGERDSSQH 114
            +   +     RLD      +P   +G  +L D   R      F++     Q     S++
Sbjct: 61  PDQLILSMVQDRLD------QPDAQKG-WIL-DGFPRNVTQATFVEDLVKQQQVEKGSEN 112

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
               SL            TI L++P ++ ++R+  R    +S        +  + HE+  
Sbjct: 113 ADSKSLN-----------TINLEVPDEVLIERLLARGRADDSEETIR--HRLQVYHEQTE 159

Query: 175 ---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              + + D  +       IV+       V   + N +
Sbjct: 160 PLIEYYRDRNQLS-----IVNGNLPLDQVTAALKNAI 191


>gi|226357197|ref|YP_002786937.1| deoxyadenosine kinase [Deinococcus deserti VCD115]
 gi|226319187|gb|ACO47183.1| putative Deoxyadenosine kinase (Deoxynucleoside kinase complex I
           S-component) [Deinococcus deserti VCD115]
          Length = 207

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 22/166 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++  G  G+GK+T   +L      +         P         R       V     
Sbjct: 1   MYLAISGNIGSGKSTLTRMLSDRYGLRPVYEPYADNPYLEDFYRDMRRYSFHSQVYFLSR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDS--- 119
             E          H+  V          ++ DR  F D++   +   +S Q    D    
Sbjct: 61  RLE---------QHLNTVTGARY-----VIQDRTVFEDANIFARNLFESGQMEQRDWDTY 106

Query: 120 --LQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
             L E  +  +  PD  I +D  +    KR+  R    E    D +
Sbjct: 107 RGLYEGVLPALRVPDLLIHIDASLPTLKKRIAQRGRAYEQDIPDAY 152


>gi|126658008|ref|ZP_01729160.1| adenylate kinase [Cyanothece sp. CCY0110]
 gi|126620646|gb|EAZ91363.1| adenylate kinase [Cyanothece sp. CCY0110]
          Length = 186

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 49/221 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55
           M++G  + F G  G+GK T    L   L   N     T         E  R  +     L
Sbjct: 1   MSTGKGLIFLGPPGSGKGTQAQQLSEAL---NIPHIST--------GEMLREAIAKQTPL 49

Query: 56  SCGVDEFGAEAEA----IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
                 +  + E     ++        +EN +     +   +L        +     +  
Sbjct: 50  GQKAQTYVDKGELVPDELLLG-----LIENRLNQEDAQQGWIL------DGFPRNVPQAE 98

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYFE--RKDV 167
                L  L + S Q +       LD+P ++ + R  ++ R    E       E  R+  
Sbjct: 99  FLDKLLHKLSKFSQQAIN------LDVPDEVIIDRLLLRGRKDDNEQTIRRRLEVYREKT 152

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +     +      Q DR   +D       V T +  +V
Sbjct: 153 ---QPVLDYY-----RQHDRLSSIDGNRQLDKVTTTLKQVV 185


>gi|218560059|ref|YP_002392972.1| hypothetical protein ECS88_3366 [Escherichia coli S88]
 gi|218366828|emb|CAR04598.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli S88]
 gi|281180025|dbj|BAI56355.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294492195|gb|ADE90951.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|307625412|gb|ADN69716.1| hypothetical protein UM146_01435 [Escherichia coli UM146]
          Length = 252

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +       + ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISRFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|208434538|ref|YP_002266204.1| adenylate kinase [Helicobacter pylori G27]
 gi|238055697|sp|B5Z6Y9|KAD_HELPG RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|208432467|gb|ACI27338.1| adenylate kinase [Helicobacter pylori G27]
          Length = 191

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V +     + R   R     D     + + H + R +FL
Sbjct: 105 AQNEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +A         +    ++   S + +   +   +   
Sbjct: 151 DPLAEIQNFYKNKNVYKAINGERSIEEIVNEMQKYILSF 189


>gi|126466131|ref|YP_001041240.1| GTPase [Staphylothermus marinus F1]
 gi|126014954|gb|ABN70332.1| protein of unknown function, ATP binding [Staphylothermus marinus
           F1]
          Length = 261

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 12/100 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN-----------YDVHVTREPGGTPAAEAARHVL 54
           +I   G  G+GKTT  S L+ +L                +V   +         +AR ++
Sbjct: 4   YIVVLGTAGSGKTTLASALQDYLINNGMDTAIVNLDPAVEVLPYKPDVDAREYVSARELM 63

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
            + G+   GA   A+   A R++ ++  +  +L    I+L
Sbjct: 64  RTQGLGPNGALIAAVDMLALRIEELKEEVW-SLKSNYIIL 102


>gi|119719417|ref|YP_919912.1| GTP-binding signal recognition particle [Thermofilum pendens Hrk 5]
 gi|119524537|gb|ABL77909.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermofilum
           pendens Hrk 5]
          Length = 431

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 18/132 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFG 63
           +F+   G+EG+GKTT ++ +  + +RK Y V V       P A E  R +    GV  +G
Sbjct: 103 MFV---GLEGSGKTTTVAKVANYYKRKGYRVGVVAADTYRPGAYEQLRSLAEKVGVPFYG 159

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E             + +  AL  G  +L D+ +         R   +   ++ ++ +
Sbjct: 160 DPQE------------RDAVSLAL-RGVKVLSDKGIQMILIDTAGRHKDEEALMEEVKTL 206

Query: 124 SVQEVMPDCTII 135
             +EV PD  ++
Sbjct: 207 Y-REVKPDAVVL 217


>gi|300905889|ref|ZP_07123622.1| hypothetical protein HMPREF9536_03881 [Escherichia coli MS 84-1]
 gi|301304166|ref|ZP_07210282.1| hypothetical protein HMPREF9347_02766 [Escherichia coli MS 124-1]
 gi|307310381|ref|ZP_07590029.1| protein with nucleoside triphosphate hydrolase domain protein
           [Escherichia coli W]
 gi|300402358|gb|EFJ85896.1| hypothetical protein HMPREF9536_03881 [Escherichia coli MS 84-1]
 gi|300840579|gb|EFK68339.1| hypothetical protein HMPREF9347_02766 [Escherichia coli MS 124-1]
 gi|306909276|gb|EFN39771.1| protein with nucleoside triphosphate hydrolase domain protein
           [Escherichia coli W]
 gi|315062303|gb|ADT76630.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli W]
 gi|315256883|gb|EFU36851.1| conserved hypothetical protein [Escherichia coli MS 85-1]
 gi|320201898|gb|EFW76473.1| hypothetical protein ECoL_00523 [Escherichia coli EC4100B]
 gi|323377112|gb|ADX49380.1| hypothetical protein EKO11_0729 [Escherichia coli KO11]
          Length = 252

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  DY E +D + +  K    +         +   +DS   +  V       V
Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239


>gi|256810897|ref|YP_003128266.1| cytidylate kinase [Methanocaldococcus fervens AG86]
 gi|256794097|gb|ACV24766.1| cytidylate kinase [Methanocaldococcus fervens AG86]
          Length = 178

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 1/92 (1%)

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +    V PD TI    P+++  +R+  R ++ +   L     ++    ++ ++I+   
Sbjct: 85  WMLLKNGVKPDLTIWFKAPLEVRAERISKRENIDKEEALKKMVERECSEKKRYKEIYNID 144

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
             +      I+DS+    + V   + + +  L
Sbjct: 145 LDDLSIYDLIIDSSKWDVEGVFNIVSSAIDNL 176


>gi|198425292|ref|XP_002120295.1| PREDICTED: similar to retinol dehydrogenase 10 isoform 1 [Ciona
           intestinalis]
          Length = 324

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 27/164 (16%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62
           + F G  G+GK+T + LL K F     + V H TR+P          H      +++   
Sbjct: 6   VVFSGPSGSGKSTLLGLLFKEFPNEFGFSVSHTTRQPRPGEVGGKHYHFTTVEEMEKEIH 65

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   E   F+       +  ++  L   KI L D                    + S++
Sbjct: 66  RGNFIEHAKFSNNMYGTSKQAVQDVLKNNKICLLD---------------IDEQGVKSIK 110

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           +    ++ P C  I   P    L+ +QNR + R +   +  ER+
Sbjct: 111 KT---DLDPLCVFI--APP--SLETLQNRLNERGTETAESIERR 147


>gi|198425290|ref|XP_002120364.1| PREDICTED: similar to retinol dehydrogenase 10 isoform 2 [Ciona
           intestinalis]
          Length = 496

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 27/164 (16%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62
           + F G  G+GK+T + LL K F     + V H TR+P          H      +++   
Sbjct: 6   VVFSGPSGSGKSTLLGLLFKEFPNEFGFSVSHTTRQPRPGEVGGKHYHFTTVEEMEKEIH 65

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   E   F+       +  ++  L   KI L D                    + S++
Sbjct: 66  RGNFIEHAKFSNNMYGTSKQAVQDVLKNNKICLLD---------------IDEQGVKSIK 110

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           +    ++ P C  I   P    L+ +QNR + R +   +  ER+
Sbjct: 111 KT---DLDPLCVFI--APP--SLETLQNRLNERGTETAESIERR 147


>gi|311263819|ref|XP_003129863.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Sus scrofa]
          Length = 3502

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     +    
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVNSWIICD-------------GDIDPEWIESLNSV 2069


>gi|2564695|gb|AAB81841.1| cytoplasmic dynein heavy chain 1b [Tetrahymena thermophila]
          Length = 1304

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  G GKTT    LK+  ++    V      P   P     R  LL    ++    
Sbjct: 531 VVLVGPSGCGKTTIWKTLKKAYEKMGTQVKAYVMNPKSMP-----RSQLLGLMNNDTREF 585

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E ++ ++AR      VI+ +      ++CD                   +++SL  +
Sbjct: 586 TEGVLTSSAR-----EVIKESSDVISWIICD-------------GDIDPEWIESLNSV 625


>gi|73541220|ref|YP_295740.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Ralstonia eutropha JMP134]
 gi|72118633|gb|AAZ60896.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Ralstonia eutropha JMP134]
          Length = 651

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 53/173 (30%), Gaps = 58/173 (33%)

Query: 7   IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I  F G+ GAGK+T  +L+++ L    +  +                 LL       G  
Sbjct: 471 IVWFTGLSGAGKSTIANLVEKRLHALGHHTY-----------------LLDGDNVRHGLN 513

Query: 66  AEAIVFAAARLD---HVENVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQH 114
            +     A R++    V  V R  L  G ++L         +R      A     D    
Sbjct: 514 KDLGFSEADRVENIRRVAEVARLMLDAGLVVLVSFISPFRSER----EMARALAGDGEFA 569

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDI-------GLKRVQNRYSLRESACLD 160
                              + +D P+D+       GL R   R  L+    +D
Sbjct: 570 E------------------VFIDTPLDVAELRDPKGLYRKARRGELKNFTGID 604


>gi|300867700|ref|ZP_07112345.1| putative adenylate kinase 2 [Oscillatoria sp. PCC 6506]
 gi|300334283|emb|CBN57517.1| putative adenylate kinase 2 [Oscillatoria sp. PCC 6506]
          Length = 185

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 49/214 (22%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--------LSCGV 59
              G  GAGK T   LL  +L         T         +  R  +        L+   
Sbjct: 4   VILGGPGAGKGTQTELLCSYLS---IPCIST--------GDILREAIASQTNLGRLAEPY 52

Query: 60  DEFGA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            E G     E ++    +   + +V +  L++G             A+Q E         
Sbjct: 53  VEKGDLVRDETMIEFIRQRLLLPDVTKGWLLDG---------YPRTAFQAEELDFLVDEF 103

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174
               + +         I L++P  + + R   R    +    +  +R+  +  ++     
Sbjct: 104 GQKVDWA---------IYLNVPDAVLMSRSLGRSRADDQ--PEIVQRRIELFRDRTIPIL 152

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +         +   V        +   IL  +
Sbjct: 153 EYY-----EHRQKLLTVSGNQPPDQIHQEILKKL 181


>gi|71419648|ref|XP_811232.1| adenylate kinase [Trypanosoma cruzi strain CL Brener]
 gi|70875872|gb|EAN89381.1| adenylate kinase, putative [Trypanosoma cruzi]
          Length = 260

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 57/221 (25%), Gaps = 48/221 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  GAGK T    + +          DV        T   E   + +           +E
Sbjct: 58  GPSGAGKRTQSRRIAQKYGAVVVNADDVFREEMSKDTKEGEKVANCMRDGIPVPHDVASE 117

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            I         +  +          +L               +       ++L  +    
Sbjct: 118 LI---------IRRLKMEDANSKGWVL---------------NGFPRTRSEAL-RLQTAG 152

Query: 128 VMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY-FERKDVMIHEK 172
           + P   I+LD+P ++ ++R   R                  +   ++  FE  D +    
Sbjct: 153 ISPLFFILLDVPYEVAVQRCNGRRYDPITQNVYHMEFCPPPQGMAVERMFEDDDSLAAVV 212

Query: 173 RRQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            R  +      ++          +D       V+  I   V
Sbjct: 213 SRWKYFDARKDELIECYEPVFVRIDGNRPLDVVSQEIFEQV 253


>gi|312375502|gb|EFR22864.1| hypothetical protein AND_14094 [Anopheles darlingi]
          Length = 232

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 15/174 (8%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVD 60
           F  F EG  G+GKTT +   ++F      DV +  EP          ++L          
Sbjct: 46  FTVFVEGNIGSGKTTFLDHFQQF-----DDVCLLTEPVEKWRNCGGVNLLDLMYKEAYRW 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118
               +    +       H     +P  +  + L   R  F++S  A         ++  +
Sbjct: 101 AMPFQTYVTLTMLDM--HTSKTDKPVKLMERSLFSARNCFVESMLASGSLHRGMYNVLQE 158

Query: 119 SLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
             + I     +  D  + L    ++   R+Q R    ES     + ++   +HE
Sbjct: 159 WYEFICCNIHIQADLIVYLQTSPEVVYDRMQKRARSEESCVPLEYLKELHELHE 212


>gi|307165868|gb|EFN60223.1| Probable adenylate kinase isoenzyme F38B2.4 [Camponotus floridanus]
          Length = 189

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 64/210 (30%), Gaps = 37/210 (17%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  G GK T    +      L   + D+       G+    + + ++            E
Sbjct: 8   GGPGCGKGTQCDRMIEKYGLLHLSSGDLLRAEVASGSERGASLQDLMSKGLFVPTDIVLE 67

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                      ++  +  A  EG          + +   G         L        Q 
Sbjct: 68  L----------IKEKMEKARAEGV-------TKTGFLIDGYPREKDQGILFE------QN 104

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIAR 182
           V P D  +  D+  +   KR+  R ++ + A  +          +KR +IF     +I  
Sbjct: 105 VCPVDLILFFDVANETLKKRLLGRAAVSQRADDN------EETIKKRIEIFNTKNNEIVE 158

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  D+   +++  +   +   +   +  L+
Sbjct: 159 HYKDKVVRINAEGTVDEIFAEVTKALDALL 188


>gi|303235611|ref|ZP_07322218.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella disiens
           FB035-09AN]
 gi|302484058|gb|EFL47046.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella disiens
           FB035-09AN]
          Length = 204

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 38/198 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGAE 65
           I+  G  G+GKTT  ++L +               G  P  E+   +  L     +    
Sbjct: 3   IAIAGNIGSGKTTLTTMLAKR-------------YGWVPRYESVDYNPYLDDYYKDIKRW 49

Query: 66  AEAIVFAAARLDHVENVIRPALM---EGKILLCDR--------FLDSSYAYQGERDSSQH 114
           +      A  +  ++   +  L    EGK ++ DR        F  ++YA     +    
Sbjct: 50  S-----FAMEIFFLKERFKDLLEISKEGKDVIQDRTIYEGVYVFTANNYAMGNLDNRDYE 104

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173
            +++  ++++     PD  + L   V   +  ++ R    E    +DY E        KR
Sbjct: 105 TYMELFEDMTDAVRYPDLMLYLKSSVSHLVANIEKRGRNYEQRMPIDYLEN-----INKR 159

Query: 174 RQIFLDIARNQPDRCHIV 191
              F++       R   +
Sbjct: 160 YDDFIE--NQYKGRVLTI 175


>gi|169629926|ref|YP_001703575.1| shikimate kinase [Mycobacterium abscessus ATCC 19977]
 gi|169241893|emb|CAM62921.1| Shikimate kinase (AroK) [Mycobacterium abscessus]
          Length = 216

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 44/201 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L + L     +V+ T     T A      +  + G  EF        
Sbjct: 9   GLPGSGKSTIGRRLAKAL---GVNVYDTDTGIETEAGRTIAQIFANDGEPEF-------- 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R++  E+VIR AL +   ++            G          ++L   +      
Sbjct: 58  ---RRIE--ESVIRQALDQQDGVVS----------LGGGAVLTPGVREALAGHT------ 96

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA--RNQPDRC 188
              + L++    G++R          A  D  E+   ++ ++   ++ ++A  +   DR 
Sbjct: 97  --VVYLEISAAEGIRRTGGSVVRPLLAGPDRAEKYHALMSQRVP-LYREVATIKVNTDR- 152

Query: 189 HIVDSAHSFQSVATNILNIVW 209
                  +  +V   I++ + 
Sbjct: 153 ------RNPGAVVRMIVSRLE 167


>gi|116754856|ref|YP_843974.1| signal recognition particle-docking protein FtsY [Methanosaeta
           thermophila PT]
 gi|116666307|gb|ABK15334.1| signal recognition particle-docking protein FtsY [Methanosaeta
           thermophila PT]
          Length = 379

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ + R+L+ + Y V +    G T  A A     L         + 
Sbjct: 186 ILFVGVNGTGKTTSIAKVARYLKERGYSVVLAA--GDTFRAGAIEQ--LETHGQRLDLKV 241

Query: 67  EAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + + I  A    K ++L D            R  +    +D +++I  
Sbjct: 242 IKHKTGGDPAAVIFDAIEYAKAHKKDVVLAD---------TAGRLHTNINLMDQMKKIV- 291

Query: 126 QEVMPDCTIILD 137
           +   PD  I +D
Sbjct: 292 RVTKPDMLIFVD 303


>gi|317010838|gb|ADU84585.1| adenylate kinase [Helicobacter pylori SouthAfrica7]
          Length = 191

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT       ++ + N         G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTD----AEWIAKNNSATIAHFSTGDLLRAESAKKTDRGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      ++L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGVILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++  K  + R   R     D     +V+ H + R +FL
Sbjct: 105 AQSEVVLKSV---------IEVEVSEKTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   I   +   
Sbjct: 151 DPLMEIQNFYKAKKVYKTINGERSIEEIVHEIQEYILSF 189


>gi|284032265|ref|YP_003382196.1| Shikimate kinase [Kribbella flavida DSM 17836]
 gi|283811558|gb|ADB33397.1| Shikimate kinase [Kribbella flavida DSM 17836]
          Length = 167

 Score = 44.2 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 68/206 (33%), Gaps = 41/206 (19%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG  +   G  G+GK+T  +LL   L + + D     E   T A +    + +  G   F
Sbjct: 2   SGPVVVLVGPPGSGKSTVAALLAAKLGKLHRDTDTDVE---TTAGKPISDIFVDSGEPAF 58

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A   A + AA             L +G  +L            G            L  
Sbjct: 59  RALERAAIVAA-------------LQDGDAVLS----------VGGGAILDADTRSDLSG 95

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
            +         + LD+ V    KRV    +          + K++M  + RR ++ ++A+
Sbjct: 96  HT--------VVYLDVSVGEAAKRVGLGVARPLLLGNVRTQLKNLM--DARRPLYAEVAK 145

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
                    D   + + +A  I   +
Sbjct: 146 L----TVTTDG-RTPEEIADEIAEQL 166


>gi|49185387|ref|YP_028639.1| hypothetical protein BAS2379 [Bacillus anthracis str. Sterne]
 gi|49179314|gb|AAT54690.1| hypothetical protein BAS2379 [Bacillus anthracis str. Sterne]
          Length = 202

 Score = 44.2 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 55/222 (24%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56
           MN     I+   + G GKTT    L   L      ++  R       T   +        
Sbjct: 17  MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 69

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D    +   +      + H+   IR + ++  I+      D  +AY           
Sbjct: 70  --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 107

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R   R         D+ E     IH      
Sbjct: 108 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHY 153

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
               R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 154 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 195


>gi|148234660|ref|NP_001089688.1| hypothetical protein LOC734750 [Xenopus laevis]
 gi|76779505|gb|AAI06339.1| MGC130873 protein [Xenopus laevis]
          Length = 364

 Score = 44.2 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 12/102 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVL 54
            I   G+ G+GKTT +  L  +L  KN           VH    P      +    + V+
Sbjct: 12  LIVL-GMAGSGKTTLVQRLTAYLHGKNSPPYVINLDPAVHEIPFPANIDIRDTVNYKEVM 70

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   G    ++   A R D V   I       + ++ D
Sbjct: 71  KQYSLGPNGGIVTSLNLFATRFDQVVKFIEKRQKNCRYVVMD 112


>gi|323941914|gb|EGB38093.1| gyghR [Escherichia coli E482]
          Length = 250

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 56/237 (23%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  D+ E +D + +  K    +         +   +DS   +  V       V
Sbjct: 194 -----KPDHDELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 237


>gi|154339970|ref|XP_001565942.1| dynein heavy chain [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063260|emb|CAM45464.1| putative dynein heavy chain [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 4469

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T +S+L++ LQ  N  V      P   P     R  LL     +    
Sbjct: 2121 VVLVGPSGSGKSTLLSILRKALQTMNITVPMHVMNPKAMP-----RRRLLGYMDADTREW 2175

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AAR     +V++ +      +LCD                   +++SL  +
Sbjct: 2176 YDGVLTVAAR-----DVVKQSKEARPWVLCD-------------GDIDPEWIESLNSV 2215


>gi|62859917|ref|NP_001016888.1| thymidine kinase 2, mitochondrial [Xenopus (Silurana) tropicalis]
 gi|89272873|emb|CAJ82140.1| thymidine kinase 2, mitochondrial [Xenopus (Silurana) tropicalis]
 gi|156230705|gb|AAI52033.1| thymidine kinase 2, mitochondrial [Xenopus (Silurana) tropicalis]
          Length = 274

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 64/233 (27%), Gaps = 53/233 (22%)

Query: 1   MNSGLF-----------------ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREP 41
           M+ G+F                 I  EG   +GKT+ +        L+     V   R  
Sbjct: 46  MHGGMFSSGSAGNGLKHREKSTLICVEGNIASGKTSCLDFFSNTADLEVYKEPVAKWRNV 105

Query: 42  -GGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
            G  P       +           +    +       H +  I P      + + +R + 
Sbjct: 106 RGHNPLGL----MYQDPNKWGLTLQTYVQLTMLD--IHTKPSISP------VKMMERSIY 153

Query: 101 SSY------AYQGERDSSQHLFL--DSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRY 151
           S+        YQ  +       +  +  + I    +   D  + L    +   +R++ R 
Sbjct: 154 SAKYIFVENLYQSGKMPEVDYAILTEWFEWIVKNTDTSVDLIVYLQTSPETCYQRLKKRC 213

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLD-IARNQ----PDRCHIVDSAHSFQS 199
              E           +        ++ D + +      P    ++D+    + 
Sbjct: 214 REEERVIP-------LEYLYAIHNLYEDWLVKQTSFPVPAPVLVIDANKELEE 259


>gi|269139148|ref|YP_003295849.1| hemin transport system ATP-binding protein [Edwardsiella tarda
           EIB202]
 gi|267984809|gb|ACY84638.1| hemin transport system ATP-binding protein [Edwardsiella tarda
           EIB202]
 gi|304559072|gb|ADM41736.1| ABC-type hemin transport system, ATPase component [Edwardsiella
           tarda FL6-60]
          Length = 260

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 31/211 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFG 63
            +   G  GAGK+T + LL  +L+        + ++    PA + A R  ++        
Sbjct: 34  LVVIIGPNGAGKSTLMRLLAGYLRPDSGRCTLLGKDLAAWPAQQLAQRRAVMRQHSALAF 93

Query: 64  AEAEAIVFAAARL-------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +   V A  R          ++ V++     G + L DR   +        +  +   
Sbjct: 94  PFSVREVIAMGRAPCPEGQQQALQAVMQ---QSGCLALADRDYRTL----SGGEQQRVQL 146

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRR 174
             +L ++      P   + LD      L     ++ LR    +   E   V   +H+   
Sbjct: 147 ARALAQLWHPNPQP-RWLFLD-EPTSALDLFHQQHLLRLLHGMTRCEPLSVCCILHD--- 201

Query: 175 QIFLDIARNQPDRCHIVD-----SAHSFQSV 200
              L++A    DR  ++      ++ + + V
Sbjct: 202 ---LNLAALYADRILLLHQGALVASGTPEQV 229


>gi|242398956|ref|YP_002994380.1| Putative adenylate kinase [Thermococcus sibiricus MM 739]
 gi|242265349|gb|ACS90031.1| Putative adenylate kinase [Thermococcus sibiricus MM 739]
          Length = 190

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 74/220 (33%), Gaps = 57/220 (25%)

Query: 1   MNSG--LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G  + I+  G  G GKTT   LL     +  YD    RE             L    
Sbjct: 1   MVGGEKMLIAVSGTPGVGKTTVAKLLAE---KMGYDYVDLRE-----------FALKHRI 46

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +  G E E         D +   ++  L     +L             +   S  + +D
Sbjct: 47  GEIRGDELEIEF------DKLAYYVKEKLKNRNTVL-------------DGHLSHLMPVD 87

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +             IIL     +  +R++ R   +E    +  E + V +        L
Sbjct: 88  QI-------------IILRAHPKLIGERLKERGYTKEKISEN-VEAELVDV------CLL 127

Query: 179 DIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
           + A ++ +    VD+   + + V   IL+++   +++++ 
Sbjct: 128 E-ALDENEAIIEVDTTNKTPEEVVNEILSLLERGIKRKIG 166


>gi|189195660|ref|XP_001934168.1| guanylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187980047|gb|EDU46673.1| guanylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 206

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 62/172 (36%), Gaps = 29/172 (16%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  GAGK+T +S L + +  +  + + H TR P GT       + +      +   
Sbjct: 20  IVISGPSGAGKSTILSRLFEEYPGKFGFSISHTTRGPRGTEQNGKEYYFVTKEEFQDLIE 79

Query: 65  E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +    E   F           +     +G+I + D                  + ++ ++
Sbjct: 80  KKGFVEHAQFGGNYYGTSVKAVNDIAEKGQICILD------------------IEMEGVK 121

Query: 122 EISVQ--EVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +++       P    +   P   +I  KR+++R + +E A L    +  V +
Sbjct: 122 QVANHPTFPRPR--FLFLQPPSMEILEKRLRSRATDKEEAILKRLNQAKVEM 171


>gi|156377987|ref|XP_001630926.1| predicted protein [Nematostella vectensis]
 gi|156217957|gb|EDO38863.1| predicted protein [Nematostella vectensis]
          Length = 196

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLDIARNQP 185
           D  + L+   ++  +R+  R     R    ++  +++ V   EK     + +   ++   
Sbjct: 105 DFVLYLECTEEVMQERLLKRAETSGRPDDNIETIKKRFVTFLEKTVPVVEHYEKQSKA-- 162

Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL--VQKR 215
              H +D++   + V   I ++  EL  +++R
Sbjct: 163 ---HRIDASRPLEEVYNAISSLFAELPKLERR 191


>gi|91212398|ref|YP_542384.1| hypothetical protein UTI89_C3406 [Escherichia coli UTI89]
 gi|117625290|ref|YP_854462.1| hypothetical protein APECO1_3437 [Escherichia coli APEC O1]
 gi|191172571|ref|ZP_03034111.1| conserved hypothetical protein [Escherichia coli F11]
 gi|237706269|ref|ZP_04536750.1| ATP-binding protein YghR [Escherichia sp. 3_2_53FAA]
 gi|300973442|ref|ZP_07172198.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|300993123|ref|ZP_07180209.1| hypothetical protein HMPREF9553_04263 [Escherichia coli MS 200-1]
 gi|301048201|ref|ZP_07195237.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|331659266|ref|ZP_08360208.1| hypothetical ATP-binding protein YghR [Escherichia coli TA206]
 gi|91073972|gb|ABE08853.1| hypothetical protein UTI89_C3406 [Escherichia coli UTI89]
 gi|115514414|gb|ABJ02489.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|190907239|gb|EDV66838.1| conserved hypothetical protein [Escherichia coli F11]
 gi|226899309|gb|EEH85568.1| ATP-binding protein YghR [Escherichia sp. 3_2_53FAA]
 gi|300299959|gb|EFJ56344.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300305138|gb|EFJ59658.1| hypothetical protein HMPREF9553_04263 [Escherichia coli MS 200-1]
 gi|300410784|gb|EFJ94322.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|315288783|gb|EFU48181.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|315291264|gb|EFU50624.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|323951493|gb|EGB47368.1| ATP-binding protein YghR [Escherichia coli H252]
 gi|323957865|gb|EGB53579.1| ATP-binding protein YghR [Escherichia coli H263]
 gi|324011921|gb|EGB81140.1| hypothetical protein HMPREF9533_04079 [Escherichia coli MS 60-1]
 gi|331053848|gb|EGI25877.1| hypothetical ATP-binding protein YghR [Escherichia coli TA206]
          Length = 256

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 27  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 87  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +       + ++ +E           P+  I L + +D  + R
Sbjct: 146 YYDGPGIGVERATGKISRFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 197


>gi|300931868|ref|ZP_07147165.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300460291|gb|EFK23784.1| conserved hypothetical protein [Escherichia coli MS 187-1]
          Length = 252

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 34/173 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYSFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQE----------VMPDCTIILDLPVDIGLKR 146
            Y G     +      + +   Q             P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERAT-GKINQFLAQRERQLYQQMAQYRPELIIRLGIDIDTAISR 193


>gi|223995257|ref|XP_002287312.1| signal recognition particle 54 kDA subunit [Thalassiosira
           pseudonana CCMP1335]
 gi|220976428|gb|EED94755.1| signal recognition particle 54 kDA subunit [Thalassiosira
           pseudonana CCMP1335]
          Length = 486

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 16/140 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++GAGKTT    L   L ++N  V +       PAA     +L      + G E 
Sbjct: 111 ILLAGLQGAGKTTAAGKLAFRLPKRNRKVLLVAADVYRPAAIEQLQIL----GKQIGVEV 166

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            ++   A   D  +  +  A  EG   ++ D            R       ++ L+    
Sbjct: 167 FSMGVDADPADIAKEAVEKAKREGFDTVVVD---------TAGRQVVDEELMEELRR-VK 216

Query: 126 QEVMPDCTIILDLPVDIGLK 145
           + V PD T+++ +    G  
Sbjct: 217 KTVEPDETLLV-VDAMTGQA 235


>gi|253744978|gb|EET01103.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative
           [Giardia intestinalis ATCC 50581]
          Length = 215

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 21/152 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG   AGK+T    L             T      P  E     L      ++G +
Sbjct: 9   FI-LEGNIAAGKSTLAGKLAEMY---GLT-LFTEPVEENPYLE-----LFYEDPKKWGYQ 58

Query: 66  AEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ------GERDSSQHLFLD 118
            +   F   RL+  +  ++ +   +G  +L DR + S   +       G    +     +
Sbjct: 59  MQTWFFN-QRLNTYKEAVQASKTVKG--VLLDRSVFSDLVFALNSYEDGFISDADFKLYN 115

Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQN 149
              +  ++ + +P   + LD+  +    R+ N
Sbjct: 116 EQYQAQLKGLPLPTVILYLDVTPETCYYRIHN 147


>gi|14521347|ref|NP_126823.1| putative kinase [Pyrococcus abyssi GE5]
 gi|46397298|sp|Q9UZK4|KAD6_PYRAB RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|5458565|emb|CAB50053.1| Nucleotide kinase (related to CMP and AMP kinases) [Pyrococcus
           abyssi GE5]
          Length = 180

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 59/216 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63
           + I+  G  G GKTT   LL   L    Y+                R   L  G   E  
Sbjct: 1   MLIAITGTPGVGKTTIAKLLAEKL---GYEYV------------NLRDFALEKGCGREVD 45

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E E        +D +   +   L +  ++L     D   ++                  
Sbjct: 46  GEVEV------EIDELAYFVEKELKDRNVVL-----DGHLSH------------------ 76

Query: 124 SVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               +MP D  ++L     I  +R++ R   +E    +  E + V          L  A 
Sbjct: 77  ----LMPVDLVVVLRAHPRIIGERLRERGYSKEKIGEN-VEAELVD-------AILIEAI 124

Query: 183 NQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217
           ++ +    VD+   + + +   I+ ++   V++RV 
Sbjct: 125 DEHENVIEVDTTNKTPEEIVEEIIGLIKSGVKRRVG 160


>gi|220931824|ref|YP_002508732.1| Guanylate kinase [Halothermothrix orenii H 168]
 gi|219993134|gb|ACL69737.1| Guanylate kinase [Halothermothrix orenii H 168]
          Length = 194

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 55/177 (31%), Gaps = 26/177 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G      G  G GK T +  L    +   Y V   TR+P            L     
Sbjct: 1   MGKGKLFVLSGPSGVGKGTVLDKLLSDFKDVQYSVSATTRKPRPGEKDGVDYFFLSREKF 60

Query: 60  DEFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            +     E I +A    ++       +   L EGK ++ +         QG R       
Sbjct: 61  FKMVENNEFIEWAEVHNNYYGTPKIFVDKCLAEGKDVILE------IDIQGARQ------ 108

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                   V+++ PD   I  +P   +   +R+ +R S  E          +  + E
Sbjct: 109 --------VKKLYPDAIFIFLVPPSLNELKRRLNHRGSEDEKNMKIRLNNAEDELKE 157


>gi|62088460|dbj|BAD92677.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa
           precursor variant [Homo sapiens]
          Length = 241

 Score = 43.9 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 45/103 (43%), Gaps = 8/103 (7%)

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111
             D      ++ ++++ RL    + +   L  G+ ++ +R + S + +      QG    
Sbjct: 128 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 186

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSL 153
                 + ++ +++ + + P   I +D+PV    +R+Q +  +
Sbjct: 187 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDV 229


>gi|317124721|ref|YP_004098833.1| shikimate kinase [Intrasporangium calvum DSM 43043]
 gi|315588809|gb|ADU48106.1| shikimate kinase [Intrasporangium calvum DSM 43043]
          Length = 174

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 62/203 (30%), Gaps = 49/203 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGKTT    L   L      +H T       A  +   + +  G   F     A  
Sbjct: 13  GPPGAGKTTVGRALASRL---GVPLHDTDAAIEQAAGRSISDIFVDDGEPAFRDLERA-- 67

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                      V R    E  I+                       +D L E ++     
Sbjct: 68  ----------EVARALTEEPGIV----------------ALGGGAVMDPLTEAALAG--- 98

Query: 131 DCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
              + LD+ +    KRV   ++R  L  +    +     V +   RR  +  +A      
Sbjct: 99  HIVVFLDVGIADASKRVGFDRSRPLLSVNPRASW-----VAMMNARRATYERVAG----- 148

Query: 188 CHIVD-SAHSFQSVATNILNIVW 209
            H VD +  + + VA  I  ++ 
Sbjct: 149 -HRVDTAGRTPEDVAAEIAALLE 170


>gi|269791948|ref|YP_003316852.1| hypothetical protein Taci_0333 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269099583|gb|ACZ18570.1| protein of unknown function DUF344 [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 486

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 41/156 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG++ AGK   I  L + L  + Y V  T  P                         
Sbjct: 293 IVFEGMDAAGKGGCIKRLTQNLDPRGYQVVPTSAPNDWE--------------------- 331

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQG-ERDSSQHLFLDSL---- 120
                   R  H       +  +G  + + DR        +  E   S+  +  +     
Sbjct: 332 --------RAHHYLWRFWESFPKGGHVGIYDRSWYGRVLVERIEGFCSEEEWRRAFGEIN 383

Query: 121 ---QEISVQEVMPDCT-IILDLPVDIGLKRVQNRYS 152
              ++ +    +       L +  D  LKR + R  
Sbjct: 384 EMERQWADFGAI--IVKFWLHVTPDEQLKRFKERQE 417



 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          I FEG +GAGK T ++ L + L  + ++VH  + P         R 
Sbjct: 43 IVFEGWDGAGKGTLMNELIQALDPRGFEVHNVK-PDQERLWPPMRR 87


>gi|327438673|dbj|BAK15038.1| uncharacterized conserved protein [Solibacillus silvestris StLB046]
          Length = 280

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 75/241 (31%), Gaps = 62/241 (25%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL I+FEG++ AGK   I  L   +  +   V         P +        +    E  
Sbjct: 42  GLIIAFEGMDAAGKGGAIKRLTERIDPRGLMV--------WPIS--------APQPHEM- 84

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
                      R  +++   R     G+I + DR        +  E  + +  +  + +E
Sbjct: 85  -----------RYHYMQRFWRKLPQHGQIAIFDRSWYGRVLVERIEGFAEEAEWKRAYEE 133

Query: 123 ISVQEVMPDCT--------IILDLPVDIGLKRVQNRY---------SLRESACLDYFE-- 163
           I+  E     T          + +  D  LKR   R          +  +    D F+  
Sbjct: 134 INSFEKQ--LTDEDYIMIKFWIHIDSDEQLKRFNERAADPYKSWKLTAEDWRNRDKFDLY 191

Query: 164 -RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH---SFQSVATNILNIVWELVQKRVSPL 219
                 + EK          ++    H++       +   V   ++  + + V KR   L
Sbjct: 192 CEAADEMFEKT--------DSENAPWHLIPGNDKNYARVQVLKEVVTHIEKEVTKRGLKL 243

Query: 220 S 220
           +
Sbjct: 244 T 244


>gi|260468533|ref|ZP_05813700.1| adenylate kinase [Mesorhizobium opportunistum WSM2075]
 gi|259028689|gb|EEW29998.1| adenylate kinase [Mesorhizobium opportunistum WSM2075]
          Length = 202

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 31/203 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L     +       T         +  R  + +    E G  A+A++
Sbjct: 7   GPPGAGKGTQAQRLVE---KHGIPQLST--------GDMLRAAVQAG--TEVGKRAKAVM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE-ISVQE 127
                 + V + I  A      ++ +R   ++ A     D      +  D++++ ++ + 
Sbjct: 54  ---DAGELVSDAIVNA------IVAERIDQANCAKGFILDGYPRTLVQADAVEQMLAERG 104

Query: 128 VMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN--- 183
           +  D  I L +     + R+  R    + +      +    +  E+ R+ +   A     
Sbjct: 105 IGLDTVIELVVDDRALVGRIVKRAEDAKAAGQPVRKDDNPAVFEERLREYYKKTAPLTGY 164

Query: 184 --QPDRCHIVDSAHSFQSVATNI 204
                R   VD   S  +V   I
Sbjct: 165 YYAKGRLKTVDGMASIDAVTAEI 187


>gi|317177551|dbj|BAJ55340.1| adenylate kinase [Helicobacter pylori F16]
          Length = 191

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSMEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 105 AQNEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189


>gi|322827694|gb|EFZ31758.1| hypothetical protein TCSYLVIO_1919 [Trypanosoma cruzi]
          Length = 335

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 58/221 (26%), Gaps = 48/221 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  GAGK T    + +          DV        T   E   + +           +E
Sbjct: 133 GPSGAGKRTQSRRIAQKYGAVVVNADDVFREEMSKETKEGEKVANCMREGIPVPHDVASE 192

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            I         +  +          +L               +       ++L  +    
Sbjct: 193 LI---------IRRLKMEDASSNGWVL---------------NGFPRTRSEAL-RLQTAG 227

Query: 128 VMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY-FERKDVMIHEK 172
           + P   I+LDLP ++ ++R   R                  E   ++  FE  D +    
Sbjct: 228 ISPLFFILLDLPYEVAVQRCNGRRYDPITQNVYHMEFCPPPEGMAVERMFEDDDSLAAVV 287

Query: 173 RRQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            R  +      ++          +D +     V+  I   V
Sbjct: 288 SRWKYFDARKDELIECYEPVFVRIDGSRPVDVVSQEIFEQV 328


>gi|317133154|ref|YP_004092468.1| ABC transporter related protein [Ethanoligenens harbinense
          YUAN-3]
 gi|315471133|gb|ADU27737.1| ABC transporter related protein [Ethanoligenens harbinense
          YUAN-3]
          Length = 367

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G FI+  G  G GKTT + L+ 
Sbjct: 29 MQKGKFITLLGPSGCGKTTLLRLIA 53


>gi|227533981|ref|ZP_03964030.1| adenylate kinase (ATP-AMP transphosphorylase) (AK) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239630330|ref|ZP_04673361.1| adenylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|227188358|gb|EEI68425.1| adenylate kinase (ATP-AMP transphosphorylase) (AK) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239527942|gb|EEQ66943.1| adenylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 213

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 73/244 (29%), Gaps = 73/244 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    ++            T         +  R  +        G EA+  +
Sbjct: 2   GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 48

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               +   V + +   +++ ++   D   D+ Y   G   + Q    ++L+ I+     P
Sbjct: 49  ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 101

Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166
            D  I +D+     + R+  R                     +       ++F+R+D   
Sbjct: 102 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 161

Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                            +  +EK  +  L          H V+       V   I  I+ 
Sbjct: 162 ATVKNRLKVNIEMNTPLLDFYEK--KGLL----------HTVNGDQDIDKVFAEIKAILA 209

Query: 210 ELVQ 213
            + +
Sbjct: 210 AVAK 213


>gi|229552729|ref|ZP_04441454.1| adenylate kinase [Lactobacillus rhamnosus LMS2-1]
 gi|229313935|gb|EEN79908.1| adenylate kinase [Lactobacillus rhamnosus LMS2-1]
          Length = 213

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 74/244 (30%), Gaps = 73/244 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    ++            T         +  R  +        G EA+  +
Sbjct: 2   GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 48

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               +   V + +   +++ ++   D   D+ Y   G   + Q    ++L+ I+     P
Sbjct: 49  ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 101

Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166
            D  I +D+     + R+  R                     +       ++F+R+D   
Sbjct: 102 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 161

Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                            +  ++K  +  L          H V+       V  +I  I+ 
Sbjct: 162 ETVKNRLKVNIEMNTPLLDFYQK--KGLL----------HTVNGDQDIDKVFADIKTILA 209

Query: 210 ELVQ 213
            + +
Sbjct: 210 AVAK 213


>gi|227113350|ref|ZP_03827006.1| shikimate kinase II [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 173

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 65/211 (30%), Gaps = 44/211 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  G GKTT    L + L    YD   T              V+   G  
Sbjct: 1   MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F                       AL +   +  +R + ++    G            +
Sbjct: 56  GFRQRESL-----------------ALQQ---VTSNRCIIAT----GGGMVLAEANRRFM 91

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178
            +           I L    ++  +R++      +   L      +++      R+  + 
Sbjct: 92  HDKGT-------VIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +A       H++D++ + +++  ++L ++ 
Sbjct: 145 GVAH------HVIDASQTPEAIVASVLKVLR 169


>gi|89094387|ref|ZP_01167327.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Oceanospirillum sp. MED92]
 gi|89081279|gb|EAR60511.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Oceanospirillum sp. MED92]
          Length = 627

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L++ L  K                   R  +L       G   + 
Sbjct: 464 FTGLSGSGKSTIANALEKELHAKG-----------------IRTYILDGDNIRHGLNKDL 506

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +  +  G +++         A+     + + +  +   E   
Sbjct: 507 GFTDADRIENIRRISEVAKLMVDAGIVVIT--------AFISPFRAERQMAREMFDEGEF 558

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E      + ++ P+++   R
Sbjct: 559 SE------VYINTPIEVAESR 573


>gi|254253163|ref|ZP_04946481.1| Deoxynucleoside kinase [Burkholderia dolosa AUO158]
 gi|124895772|gb|EAY69652.1| Deoxynucleoside kinase [Burkholderia dolosa AUO158]
          Length = 228

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 47/167 (28%), Gaps = 26/167 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  EG  G GKTT   LL            +   P   P  E                
Sbjct: 18  RYLVIEGPIGVGKTTLARLLGERWSMH----ALLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
           +    +  A +       +  AL  G+ ++ D      +  Q     ++    D   ++ 
Sbjct: 71  Q----LSFALQRAQQAAELAAALDTGRPVVAD------FMPQKNDIFARLNLPDDEWQLY 120

Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                         PD  + L    ++   R+Q R    E    D +
Sbjct: 121 RAVAAHLDVPHAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167


>gi|157157115|ref|YP_001464448.1| hypothetical protein EcE24377A_3451 [Escherichia coli E24377A]
 gi|193062181|ref|ZP_03043277.1| conserved hypothetical protein [Escherichia coli E22]
 gi|193067430|ref|ZP_03048398.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194426348|ref|ZP_03058903.1| conserved hypothetical protein [Escherichia coli B171]
 gi|209920460|ref|YP_002294544.1| hypothetical protein ECSE_3269 [Escherichia coli SE11]
 gi|218555558|ref|YP_002388471.1| hypothetical protein ECIAI1_3133 [Escherichia coli IAI1]
 gi|218696693|ref|YP_002404360.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli 55989]
 gi|256019092|ref|ZP_05432957.1| hypothetical protein ShiD9_09259 [Shigella sp. D9]
 gi|260845744|ref|YP_003223522.1| hypothetical protein ECO103_3668 [Escherichia coli O103:H2 str.
           12009]
 gi|260857124|ref|YP_003231015.1| hypothetical protein ECO26_4092 [Escherichia coli O26:H11 str.
           11368]
 gi|260869746|ref|YP_003236148.1| hypothetical protein ECO111_3813 [Escherichia coli O111:H- str.
           11128]
 gi|300815534|ref|ZP_07095758.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300824074|ref|ZP_07104195.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|331669801|ref|ZP_08370646.1| hypothetical ATP-binding protein YghR [Escherichia coli TA271]
 gi|331679058|ref|ZP_08379730.1| hypothetical ATP-binding protein YghR [Escherichia coli H591]
 gi|157079145|gb|ABV18853.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|192932401|gb|EDV84999.1| conserved hypothetical protein [Escherichia coli E22]
 gi|192959387|gb|EDV89822.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194415656|gb|EDX31923.1| conserved hypothetical protein [Escherichia coli B171]
 gi|209913719|dbj|BAG78793.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218353425|emb|CAU99494.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli 55989]
 gi|218362326|emb|CAQ99948.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli IAI1]
 gi|257755773|dbj|BAI27275.1| conserved hypothetical protein [Escherichia coli O26:H11 str.
           11368]
 gi|257760891|dbj|BAI32388.1| conserved hypothetical protein [Escherichia coli O103:H2 str.
           12009]
 gi|257766102|dbj|BAI37597.1| conserved hypothetical protein [Escherichia coli O111:H- str.
           11128]
 gi|300523464|gb|EFK44533.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300531463|gb|EFK52525.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|323178693|gb|EFZ64269.1| hypothetical protein ECOK1180_2425 [Escherichia coli 1180]
 gi|323183573|gb|EFZ68970.1| hypothetical protein ECOK1357_3353 [Escherichia coli 1357]
 gi|323946689|gb|EGB42710.1| ATP-binding protein YghR [Escherichia coli H120]
 gi|324018173|gb|EGB87392.1| hypothetical protein HMPREF9542_03228 [Escherichia coli MS 117-3]
 gi|331062714|gb|EGI34628.1| hypothetical ATP-binding protein YghR [Escherichia coli TA271]
 gi|331073123|gb|EGI44446.1| hypothetical ATP-binding protein YghR [Escherichia coli H591]
 gi|332102547|gb|EGJ05893.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Shigella sp. D9]
          Length = 252

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + ++  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193


>gi|54025361|ref|YP_119603.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Nocardia farcinica IFM 10152]
 gi|54016869|dbj|BAD58239.1| putative ATP sulfurylase large subunit [Nocardia farcinica IFM
           10152]
          Length = 641

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  + Y  +                 LL       G  A+ 
Sbjct: 465 FTGLSGAGKSTVANLVEKRLHEQGYHTY-----------------LLDGDNVRHGLNADL 507

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLC 95
               A R++++  V+  A      G I+L 
Sbjct: 508 GFTDADRVENIRRVVEVARLLADAGLIVLT 537


>gi|108804953|ref|YP_644890.1| adenylate kinase [Rubrobacter xylanophilus DSM 9941]
 gi|108766196|gb|ABG05078.1| Adenylate kinase [Rubrobacter xylanophilus DSM 9941]
          Length = 208

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 48/226 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G +GAGK T  + L      ++         G    AE      L   V E+    
Sbjct: 3   IILLGPQGAGKGTQAARLSERTGARHIST------GDLVRAEIKAGTELGRKVQEYNDRG 56

Query: 67  EAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           E +       + +  + +P L   G  +L D F  +    + +  +      ++L+E+ V
Sbjct: 57  ELVP-----DEIIVEMAKPHLREAGSWIL-DGFPRT----EAQARALD----EALEELGV 102

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------RKDVMIHEK 172
                D  + L+ P ++ ++R+  R     +  + + E             ++     E 
Sbjct: 103 GL---DRVVALEAPDEVLVRRLSGRRQSEATGRIYHLEHDPPPPDDPGPFVQRKDDTEEA 159

Query: 173 RRQIFLDIARNQPDRCH----------IVDSAHSFQSVATNILNIV 208
            R+  L +   Q +              VD+  S + V   +L ++
Sbjct: 160 IRRR-LRLYHEQTEPLKGYYAERGLLATVDATRSIEEVTEELLRVL 204


>gi|118348380|ref|XP_001007665.1| hypothetical protein TTHERM_00059330 [Tetrahymena thermophila]
 gi|89289432|gb|EAR87420.1| hypothetical protein TTHERM_00059330 [Tetrahymena thermophila
           SB210]
          Length = 368

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 18/209 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   AGKTT ++ LK  L  K   V V  E   T   E    +++     E     
Sbjct: 10  ICLTGGPCAGKTTALTTLKEKLTEKGLKVFVVPEVP-TLTMEGGGMIIMGGLTSENVCRF 68

Query: 67  EAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++++  A +++  +  I  A + GK  ++L DR +     Y  +      L       + 
Sbjct: 69  QSLLMKA-QINLEDYFIDLAKLNGKPAVVLMDRGVMDPKGYMDDNTWQAVLDESGWNSVY 127

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +++   D  I L +    G    +  Y+L  +     +E     I  K  Q   +  R  
Sbjct: 128 LRDKRYDAVIHL-VTAADG---AEKFYTLENNVA--RYEDGPTAI--KVDQALQNAWRGH 179

Query: 185 PDRCHIVDSAHS-----FQSVATNILNIV 208
           P    I+D++        + V   +   V
Sbjct: 180 PHHI-IIDNSAPSFDKKIEKVINAVEKFV 207


>gi|113475590|ref|YP_721651.1| adenylylsulfate kinase [Trichodesmium erythraeum IMS101]
 gi|110166638|gb|ABG51178.1| adenylylsulfate kinase [Trichodesmium erythraeum IMS101]
          Length = 175

 Score = 43.9 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M  G  + F G+ GAGKTT   ++   L+++   V
Sbjct: 1  MEKGFILWFTGLSGAGKTTISKIVAEKLKQRGRKV 35


>gi|225453608|ref|XP_002267347.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 222

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 27/143 (18%)

Query: 81  NVIRPALMEGKILLCDRFLDS-------SYAYQGE---RDSSQHLFLDSLQEISVQEVM- 129
            +I+    EGKI+       S         A QG    +        +     + + +M 
Sbjct: 79  KMIQDYKKEGKIV------PSEVTVKLLQQAMQGSTNNKFLIDGFPCNEENRTAFENIMK 132

Query: 130 --PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQ 184
             PD  +  D   +   +R+ NR   R    +    ++  +  E        +     + 
Sbjct: 133 VEPDFVLFFDCSQEELTRRILNRNQGRVDDNIQAIPKRFQVYFESTLPVIDYY-----SS 187

Query: 185 PDRCHIVDSAHSFQSVATNILNI 207
             +   +D+  S + V   + +I
Sbjct: 188 KGKVQKIDAERSIEEVFEAVKSI 210


>gi|159107451|ref|XP_001704005.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative
           [Giardia lamblia ATCC 50803]
 gi|157432052|gb|EDO76331.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative
           [Giardia lamblia ATCC 50803]
          Length = 215

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 19/151 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI  EG   AGK+T  S L             T      P  E     L      ++G +
Sbjct: 9   FI-LEGNIAAGKSTLASKLANMY---GLT-LFTEPVEENPYLE-----LFYEDPKKWGYQ 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS- 124
            +   F   RL+  +  I+ +      +L DR + S   +         +     +  + 
Sbjct: 59  MQIWFFN-QRLNTYKEAIQASKTAKG-VLLDRSVFSDLVFALNSYEDGFISDADFKLYNE 116

Query: 125 ------VQEVMPDCTIILDLPVDIGLKRVQN 149
                     +P   + LD   +    R+ N
Sbjct: 117 QYQSQLKDLPLPTVILYLDATPETCYYRIHN 147


>gi|209517983|ref|ZP_03266815.1| sulfate adenylyltransferase, large subunit [Burkholderia sp. H160]
 gi|209501589|gb|EEA01613.1| sulfate adenylyltransferase, large subunit [Burkholderia sp. H160]
          Length = 641

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 41/160 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +LL++ L                      R  LL       G   +   
Sbjct: 468 GLSGAGKSTIANLLEKRLHAMGK-----------------RTYLLDGDNVRHGLNKDLGF 510

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            A  R++++     V +     G I++         A+     + + L  + +++    E
Sbjct: 511 TAEDRVENIRRIAEVAKLMADAGVIVIT--------AFISPFRAERALARELMED---GE 559

Query: 128 VMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
                 + +D P+++   R          R  L+    +D
Sbjct: 560 F---IEVFIDTPLEVAEGRDPKGLYKKARRGELKNFTGID 596


>gi|24114292|ref|NP_708802.1| hypothetical protein SF3031 [Shigella flexneri 2a str. 301]
 gi|30064339|ref|NP_838510.1| hypothetical protein S3232 [Shigella flexneri 2a str. 2457T]
 gi|24053448|gb|AAN44509.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30042596|gb|AAP18320.1| hypothetical protein S3232 [Shigella flexneri 2a str. 2457T]
 gi|281602375|gb|ADA75359.1| Hypothetical ATP-binding protein YghR [Shigella flexneri 2002017]
 gi|313648102|gb|EFS12548.1| uncharacterized ATP-binding protein yghR [Shigella flexneri 2a str.
           2457T]
          Length = 252

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 48/234 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKRVQNRYSLR 154
            Y G     +         ++ +E           P+  I L + +D  + R        
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERSLYQKMAQYRPELIIRLGIDIDTAISR-------- 193

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                   + +   + +K     +        +   +DS   +  V   +   V
Sbjct: 194 ------KPDHEYAELQDKI--GVMSTIGYNGTKILEIDSRAPYSEVLEQVQKAV 239


>gi|304406969|ref|ZP_07388623.1| cytidylate kinase [Paenibacillus curdlanolyticus YK9]
 gi|304343956|gb|EFM09796.1| cytidylate kinase [Paenibacillus curdlanolyticus YK9]
          Length = 233

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 38/232 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    +   L    Y    T            R V LS        + 
Sbjct: 14  IAIDGPAGAGKSTVARSVAETL---GYIYIDT--------GAMYRAVTLSALRSGISPDD 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILL---CD-------RFLDSSYAYQGERDSSQHLF 116
              +  +   + +E  ++P+   G+++L   CD       R +  + +     +  +   
Sbjct: 63  RMQL--SQHAESIEISLQPS-SAGQVVLLNGCDVTIDIRSREVTLNVSQVSAVERVRVRL 119

Query: 117 LDSLQEISVQE------------VMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +   ++++  +            V+PD    + L   V+    R       R+   L+  
Sbjct: 120 VAMQRQLARGKGVVMDGRDIGSHVLPDAELKVYLTATVEERALRRFKELDGRDGITLEQL 179

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           E +      K ++  +      PD   +  ++ + + VA NI+N+    + +
Sbjct: 180 EHEIAERDRKDQEREISPLVCAPDAIVLDSTSMTIEQVADNIVNLSRTKLAE 231


>gi|296414524|ref|XP_002836949.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632795|emb|CAZ81140.1| unnamed protein product [Tuber melanosporum]
          Length = 307

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 57/214 (26%), Gaps = 56/214 (26%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L R      L      +   +   G+   E  +  +    +      
Sbjct: 138 GGPGAGKGTQCQSLVRDYGFVHLSA-GDLLRAEQNREGSEFGELIKTYIREGKIVPM-EV 195

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++  A R             + K +                       +D       
Sbjct: 196 TVALLENAMRDA--------IAAQQKTV---------------------FLID------- 219

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH------EKRRQIFLD 179
             + P  T+  + P D  L+R+  R         D  E      H            +  
Sbjct: 220 GSLSP-LTLFFECPEDTLLQRLLKRGET-SGRIDDNIESIKKRFHTFEVTSMPVVDYY-- 275

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               +  +   +D++ + + V   +   + + ++
Sbjct: 276 ---EKKGKVVRIDASSTREGVYLQVQKQLADKLK 306


>gi|301067482|ref|YP_003789505.1| adenylate kinase [Lactobacillus casei str. Zhang]
 gi|300439889|gb|ADK19655.1| Adenylate kinase [Lactobacillus casei str. Zhang]
          Length = 218

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 73/244 (29%), Gaps = 73/244 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    ++            T         +  R  +        G EA+  +
Sbjct: 7   GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               +   V + +   +++ ++   D   D+ Y   G   + Q    ++L+ I+     P
Sbjct: 54  ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106

Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166
            D  I +D+     + R+  R                     +       ++F+R+D   
Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166

Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                            +  +EK  +  L          H V+       V   I  I+ 
Sbjct: 167 ATVKNRLKVNIEMNTPLLDFYEK--KGLL----------HTVNGDQDIDKVFAEIKAILA 214

Query: 210 ELVQ 213
            + +
Sbjct: 215 AVAK 218


>gi|47227941|emb|CAF97570.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 219

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------NQPD 186
            +  D  +++ + R   R         +    + +    KR Q +L   R       +  
Sbjct: 140 VLFFDCSIEVCINRCLERGKNSGRTDDNR---ESL---NKRIQTYLQSTRPIIELYQKHG 193

Query: 187 RCHIVDSAHSFQSVATNILNIVWE 210
           +   +D++ S   V  ++  I+ +
Sbjct: 194 KVCTIDASRSVDEVFADVKAILDK 217


>gi|21226912|ref|NP_632834.1| signal recognition particle subunit Ffh/SRP54 [Methanosarcina mazei
           Go1]
 gi|20905220|gb|AAM30506.1| signal recognition particle subunit Ffh/SRP54 [Methanosarcina mazei
           Go1]
          Length = 419

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 66/203 (32%), Gaps = 35/203 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT IS +   L +  Y V +    G T  A A     L    D  G + 
Sbjct: 225 IVFVGINGTGKTTSISKMTHRLLKLGYSVVLAA--GDTFRAGAIDQ--LGIHADRLGVKM 280

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + ++ A       +L D            R  +    +  +++I  
Sbjct: 281 IKHQAGADPAAVIYDAVQYAKAHNIDFVLSD---------TAGRMHTNMNLMAQMEKI-C 330

Query: 126 QEVMPDCTIILD--LPVDIGLKRVQN-------------RYSLRESAC----LDYFERKD 166
           +   PD  I +D  +  +  ++R                +            + Y   K 
Sbjct: 331 RVSSPDLIIFVDEAVAGNDAVERAAQFNDAVPIDGSILTKIDADAKGGAAISIAYITGKP 390

Query: 167 VMIHEKRRQIFLDIARNQPDRCH 189
           ++      Q + D+ + +P+   
Sbjct: 391 ILFFG-VGQGYEDLKKFEPEWFV 412


>gi|325913625|ref|ZP_08175987.1| deoxyguanosine kinase [Lactobacillus iners UPII 60-B]
 gi|325476984|gb|EGC80134.1| deoxyguanosine kinase [Lactobacillus iners UPII 60-B]
          Length = 221

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++  S+L ++L                P                   + 
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123
            A +     L+     I+ AL     +L DR +   +  +Q   D  +     + +  E+
Sbjct: 50  YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108

Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                    ++ +  PD  I + +  +  +KR+Q R    E    D
Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYD 154


>gi|313233219|emb|CBY24334.1| unnamed protein product [Oikopleura dioica]
          Length = 300

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 85/254 (33%), Gaps = 56/254 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----------GGTPAAEAARHVLLS 56
           IS EG    GK+T I +L+     +++++  T EP           G+ +      +   
Sbjct: 15  ISIEGNIATGKSTFIKILEEAAGTEDWEI--TPEPVSTWTQIEGKNGSSSGGNLLKLFYD 72

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                        + +  RL       +P   A +  + +  DR++   +A         
Sbjct: 73  DAKRWSYTFQSFALLSRMRLQRA--PFKPRTVARLSERSIHSDRYI---FARNCFETGLM 127

Query: 114 HL------------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLD 160
                          L+SL ++ +        I L     +  KR+  R    E    L+
Sbjct: 128 TETEWSIYKDWSTYLLESLGDLQLDGF-----IYLRCDPKVCDKRMAKRGRPEEQGVTLE 182

Query: 161 YF----ERKDVMIHEKRRQIFL--DIARNQPDRCHIVDSAHSF---QSVA----TNILNI 207
           Y     E+ +  +H +    F   DI ++ P     +D    F   + +       +   
Sbjct: 183 YLSQLHEKHEKWLHNR---EFHDEDIMQDIP--ILEIDCNEEFHDDEEIKSKMLQQVREF 237

Query: 208 VWELVQKRVSPLSS 221
           V ++ +KR   LSS
Sbjct: 238 VRQVQEKRQEKLSS 251


>gi|288963147|ref|YP_003453426.1| adenylylsulfate kinase [Azospirillum sp. B510]
 gi|288915399|dbj|BAI76882.1| adenylylsulfate kinase [Azospirillum sp. B510]
          Length = 648

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK++    L++ L R  +                 R +LL       G   + 
Sbjct: 481 FTGLSGSGKSSVADRLEQELHRLGH-----------------RTMLLDGDNVRHGLNRDL 523

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +  +  G I+L         ++       + +    L++   
Sbjct: 524 GFTDADRVENIRRVAEVAKLMVEAGLIVLA--------SFISPFRGERLMARSLLED--- 572

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E      I +D P++I   R
Sbjct: 573 GEF---LEIFMDTPLEICEAR 590


>gi|254172921|ref|ZP_04879595.1| signal recognition 54 kDa protein [Thermococcus sp. AM4]
 gi|214033077|gb|EEB73905.1| signal recognition 54 kDa protein [Thermococcus sp. AM4]
          Length = 448

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 17/127 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT I+ L R LQ++ Y V +       P A    + ++    ++ FG   E  
Sbjct: 107 GIQGSGKTTTIAKLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPNE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 +      +     +G  +++ D            R   +   ++ +++I  + +
Sbjct: 165 ---KDAIKLAREGVEHFREKGVDVIIVD---------TAGRHKEESGLIEEMKQI-SEAI 211

Query: 129 MPDCTII 135
            P   I+
Sbjct: 212 KPHEVIL 218


>gi|199598853|ref|ZP_03212264.1| Adenylate kinase [Lactobacillus rhamnosus HN001]
 gi|258509461|ref|YP_003172212.1| adenylate kinase [Lactobacillus rhamnosus GG]
 gi|258540659|ref|YP_003175158.1| adenylate kinase [Lactobacillus rhamnosus Lc 705]
 gi|199590265|gb|EDY98360.1| Adenylate kinase [Lactobacillus rhamnosus HN001]
 gi|257149388|emb|CAR88361.1| Adenylate kinase [Lactobacillus rhamnosus GG]
 gi|257152335|emb|CAR91307.1| Adenylate kinase [Lactobacillus rhamnosus Lc 705]
 gi|259650740|dbj|BAI42902.1| adenylate kinase [Lactobacillus rhamnosus GG]
          Length = 218

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 74/244 (30%), Gaps = 73/244 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    ++            T         +  R  +        G EA+  +
Sbjct: 7   GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               +   V + +   +++ ++   D   D+ Y   G   + Q    ++L+ I+     P
Sbjct: 54  ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106

Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166
            D  I +D+     + R+  R                     +       ++F+R+D   
Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166

Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                            +  ++K  +  L          H V+       V  +I  I+ 
Sbjct: 167 ETVKNRLKVNIEMNTPLLDFYQK--KGLL----------HTVNGDQDIDKVFADIKTILA 214

Query: 210 ELVQ 213
            + +
Sbjct: 215 AVAK 218


>gi|193702261|ref|XP_001951037.1| PREDICTED: adenylate kinase isoenzyme 1-like [Acyrthosiphon pisum]
          Length = 191

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 46/213 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT------REPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T    +     +  +    T          G+   +    ++    +     
Sbjct: 13  GGPGSGKGTLCDKIVA---KYGFTHISTGDLLRDEVNTGSERGQELVKIMKEGALVPTSV 69

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E +             I+  +   K  L D +          R+  Q    ++     
Sbjct: 70  VMELL----------NEKIKSKVATSKGFLIDGY---------PREKKQGEEFET----- 105

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
              + P D  + L+   +  ++R+  R      +  +      +   +KR Q F D    
Sbjct: 106 --AIKPVDMVLYLESKDETMVERLLKRAETSGRSDDN------METIKKRLQTFHDNNDP 157

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           I      +  I+ +  S ++V       +  LV
Sbjct: 158 IIEAYKSKVVIISAEQSAEAVFAEAEKKLDTLV 190


>gi|312881141|ref|ZP_07740941.1| deoxynucleoside kinase [Aminomonas paucivorans DSM 12260]
 gi|310784432|gb|EFQ24830.1| deoxynucleoside kinase [Aminomonas paucivorans DSM 12260]
          Length = 206

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 79/228 (34%), Gaps = 33/228 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I  EG+  +GKTT + L+ R L      V    E    P       +L     D
Sbjct: 1   MGQVRLIV-EGMTASGKTTTVDLVSRRL---GLSV--MPEEFRDPY-----DLLRRFHHD 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ------- 113
              A    + F   R          A  E + +L DR +     Y G             
Sbjct: 50  RTWALPMQLQFLVTRFAQYLC----ASEEDRYVL-DRSVFGDRIYAGLYHRLGYFTDRQF 104

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEK 172
             +LD    +      P   ++L  P++  L+R++ R    E +A  DY+      +H+ 
Sbjct: 105 QTYLDLYHSLLGNLCPPRLILVLKCPLETVLERIRRRGREDELAAGEDYW----RALHQA 160

Query: 173 RRQIFLDIARNQPDRC--HIVDSAHSFQSVA-TNILNIVWELVQKRVS 217
             + FL   +++       ++D   S   V     ++     +++R+ 
Sbjct: 161 -YEGFLPHLKDEKPAIPTLVLD-TGSVNLVGDREAIDAFLADLRERLG 206


>gi|268325095|emb|CBH38683.1| putative signal recognition particle protein [uncultured archaeon]
          Length = 350

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 17/151 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
              + I F G+ G GKTT I+ + + L    + V +      T  A AA  +        
Sbjct: 143 KKPIIIVFVGVNGTGKTTSIAKVAKKLLGTGHSVVIAA--ADTYRAGAAEQI--ETHASN 198

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            G +     + +     V +  + A   G  ++L D            R  +    ++ L
Sbjct: 199 LGLKVIKHQYGSDPAAVVYDANKYASANGIDVVLAD---------TAGRMHTSINLMEQL 249

Query: 121 QEISVQEVMPDCTIILD--LPVDIGLKRVQN 149
           ++I  +   PD  + +D  +  +  ++R + 
Sbjct: 250 KKI-CRVTKPDMVLFVDEAVAGNDAVERAKK 279


>gi|261403125|ref|YP_003247349.1| cytidylate kinase [Methanocaldococcus vulcanius M7]
 gi|261370118|gb|ACX72867.1| cytidylate kinase [Methanocaldococcus vulcanius M7]
          Length = 178

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 39/92 (42%), Gaps = 1/92 (1%)

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +    + PD TI    P+++  +R+  R ++ +   L     ++    ++ ++I+   
Sbjct: 85  WMLLKNGIKPDLTIWFKAPLEVRAERISKRENIDKDIALKKMIERENSEKKRYKEIYGID 144

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
             +      I+D++  + + V   + + +  L
Sbjct: 145 IDDLSIYDLIIDTSKWNVEGVFNIVSSAIDNL 176


>gi|21668341|emb|CAC84131.1| thymidine kinase [Diadromus pulchellus ascovirus 4a]
          Length = 186

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 44/216 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I  EG  G GK++ +          N  V            E    +        +  
Sbjct: 1   MYICIEGNIGCGKSSVLKAFA-----MNNFVVFPEPLEKWTLLE---ELYRDPEKYAYPF 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHLFLDS 119
           + + ++          N     L    + + +R        S  +  G   S +   LDS
Sbjct: 53  QLQVVL-----SQIETNKAIRRLSRSCVKIMERHGGRPRTCSRTS--GIGRSPRSYVLDS 105

Query: 120 LQEISVQEVMPDCTIILD----LPVDIGLKRVQNRYSLRESACLDYFERK--DVMIHEKR 173
             ++   +V+P+  I LD    L     L+R             + FE +   +    + 
Sbjct: 106 CYDLI--DVVPEYYIYLDSTEGLSPAQ-LQR-------------NRFEERNISLDYLIRL 149

Query: 174 RQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIV 208
            + + +      +   ++D  + + + +  NI +I+
Sbjct: 150 DERYKEELSKLKNTI-VIDCGSMTTEQIVKNIRDIL 184


>gi|112983202|ref|NP_001037019.1| putative deoxynucleoside kinase [Bombyx mori]
 gi|13506751|gb|AAK28318.1|AF226281_1 putative deoxynucleoside kinase [Bombyx mori]
          Length = 248

 Score = 43.9 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 25/231 (10%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVD 60
           F  F EG  G+GKTT +   ++F      D+ +  EP          ++L          
Sbjct: 9   FTVFVEGNIGSGKTTFLEHFRQF-----EDITLLTEPVEMWRDLKGCNLLELMYKDPEKW 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERDSSQHLFLDS 119
               ++   +       H      P  +  + L   R+              +Q   LD 
Sbjct: 64  AMTFQSYVSLTMLDM--HRRPAPTPVKLMERSLFSARYCFVEHIMRNNTLHPAQFAVLDE 121

Query: 120 LQEISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQ 175
                   + P   D  + L     I  +R++ R    E    L Y E     +H +  +
Sbjct: 122 WFRFIQHNI-PIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIE----ELH-RLHE 175

Query: 176 IFL--DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
            +L   I    P    ++D+      +         ++++K V+ + S  +
Sbjct: 176 DWLINRIHAECPAPVLVLDADLDLSQITDEYKRSEHQILRKAVNVVMSSPN 226


>gi|326332212|ref|ZP_08198492.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae
           bacterium Broad-1]
 gi|325949918|gb|EGD41978.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae
           bacterium Broad-1]
          Length = 191

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 37/207 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE---AARHVLLSCGVDEFGAEAE 67
           G  GAGK T    +             T +      ++               E+  ++ 
Sbjct: 7   GPPGAGKGTQAKFIAEHF---GIPAISTGDIFRANVSQGTPLGIEAASYMDKGEYVPDSV 63

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             +    R+D       P   +G   L D +          R  +Q   LD + + +   
Sbjct: 64  TNLMVRNRID------EPDAAKGF--LLDGY---------PRTLAQVEELDGMIKFTGHA 106

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IARN 183
           +  D  ++L +  D  ++R+  R  L   A     + +DV+   +R++++L+    +   
Sbjct: 107 L--DAVVVLTVDKDEIVQRLLQRAELEGRAD----DTEDVI--RRRQEVYLEETAPLIEV 158

Query: 184 QPDR--CHIVDSAHSFQSVATNILNIV 208
              R   H +D       V   I + +
Sbjct: 159 YKGRGLVHEIDGMGEVDDVTKRIFDEL 185


>gi|305431526|ref|ZP_07400701.1| adenylyl-sulfate kinase [Campylobacter coli JV20]
 gi|304445418|gb|EFM38056.1| adenylyl-sulfate kinase [Campylobacter coli JV20]
          Length = 194

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 38/143 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + +++ L  + +  +                 LL       G   + 
Sbjct: 30  FTGLSGSGKSTLANAVEKKLFEQGFHTY-----------------LLDGDNVRHGLNGDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A+R++++     + +  +  G I+LC        A+    +  + L  D L +   
Sbjct: 73  GFDEASRVENIRRIGELCKLFMDAGMIVLC--------AFISPFEKDRKLIKDLLND--- 121

Query: 126 QEVMPD--CTIILDLPVDIGLKR 146
                D    I +D P++I  KR
Sbjct: 122 -----DEYIEIFIDTPLEICEKR 139


>gi|291278684|ref|YP_003495519.1| signal recognition particle protein [Deferribacter desulfuricans
           SSM1]
 gi|290753386|dbj|BAI79763.1| signal recognition particle protein [Deferribacter desulfuricans
           SSM1]
          Length = 447

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 19/124 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++G+GKTT    L ++ Q+   DV +  +    PAA     +L   L   V     E +
Sbjct: 109 GLQGSGKTTTAGKLAKYFQKNGKDVLLVADDIYRPAAIDQLEILGKQLKVDVFSKRDEQD 168

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           A+  A   + H ++          +++ D            R       ++ L+ I  + 
Sbjct: 169 AVKIAKEAVQHAKS------AAKDVVIID---------TAGRLHIDETLMEELKNI-KEA 212

Query: 128 VMPD 131
           + PD
Sbjct: 213 INPD 216


>gi|150400923|ref|YP_001324689.1| chromatin associated protein KTI12 [Methanococcus aeolicus
           Nankai-3]
 gi|150013626|gb|ABR56077.1| Chromatin associated protein KTI12 [Methanococcus aeolicus
           Nankai-3]
          Length = 255

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 31/163 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+ G GK+T    L + L  K  D  +          +  R         ++  
Sbjct: 1   MLIILTGLPGTGKSTFSKKLSKKLWEKGIDNIIL-------GTDLIRE-----QFPQWSN 48

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  +      +  + +I+ AL +   ++ D   D++Y Y  +R       ++  +E +
Sbjct: 49  EQEEFI-----KNSTDYLIKNALKD-YTVIVD---DTNY-YNSKRR----DLINIAKENN 94

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKD 166
              +M    I L  P+D  LKR   R +   +   +D F + D
Sbjct: 95  KNHIM----IYLKAPLDTILKRNIQRGAKIPNEVIIDMFNKFD 133


>gi|73994237|ref|XP_850303.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha
           subcomplex, 10, 42kDa precursor [Canis familiaris]
          Length = 355

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 20/168 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58
           I+ +G   +GK+     +   L  +++          T        V  S          
Sbjct: 60  ITVDGNICSGKSKVAKEIAEKLGLRHFPEAGIHYADSTTGDGRPLDVEFSGSCSMEKFYD 119

Query: 59  ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108
                D      ++ ++ A RL    + +   L  G+ ++ +R + S + +      Q  
Sbjct: 120 DPRSNDGNSYRLQSWLY-ANRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMYNQQF 178

Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                    + ++++++ E + P   I +D+PV     ++Q +    E
Sbjct: 179 IRKQCVDHYNEVKKVTICEYLPPHVVIYIDVPVPEIQSQIQKKGDPHE 226


>gi|332023686|gb|EGI63910.1| Putative adenylate kinase isoenzyme F38B2.4 [Acromyrmex echinatior]
          Length = 227

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 27/205 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T  + + +      +   ++R+             LL   V         + 
Sbjct: 39  GGPGAGKSTQCTRIAQHY---GFCAIISRQ-------------LLRTEVATGSQRGVILA 82

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SLQEISVQEV 128
           +  +    + + +   L++ K+L       SS  +            +    Q    Q  
Sbjct: 83  YLMSEGKLIPSDVMVELIKAKML-------SSL-HDTRGFLLSGFPREKTQCQHFDKQIR 134

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            PD  + L +   + L R+  +            E     I E+RR +   I R    + 
Sbjct: 135 TPDLVLYLYVRDSLLLDRILAKTITATERPQRSIEENWQRIKEQRR-LMKPIFRYYKKQL 193

Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213
            I+D  +    V  +I   + +++ 
Sbjct: 194 VIIDGENDETEVFEDICKAIDKVMN 218


>gi|321455292|gb|EFX66429.1| hypothetical protein DAPPUDRAFT_116436 [Daphnia pulex]
          Length = 582

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 33/102 (32%), Gaps = 24/102 (23%)

Query: 1  MNSGLF----ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          M  G F    I F G+ GAGKTT    L+ +L  +                       L 
Sbjct: 2  MGRGRFRGCTIWFTGLSGAGKTTLSFALENYLIARGIPAFG-----------------LD 44

Query: 57 CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLC 95
               FG  ++     A R +    V  V +     G + LC
Sbjct: 45 GDNMRFGLNSDLGFTDADREENIRRVAEVAKLFAESGVVTLC 86


>gi|317014038|gb|ADU81474.1| adenylate kinase [Helicobacter pylori Gambia94/24]
          Length = 191

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D     + + H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +A              ++   S + +   +   +   
Sbjct: 151 DPLAEIQNFYKNKKVYKAINGERSIEEIVNEMQKYILSF 189


>gi|308189954|ref|YP_003922885.1| deoxyguanosine kinase [Mycoplasma fermentans JER]
 gi|319777235|ref|YP_004136886.1| deoxyguanosine kinase [Mycoplasma fermentans M64]
 gi|307624696|gb|ADN69001.1| deoxyguanosine kinase [Mycoplasma fermentans JER]
 gi|318038310|gb|ADV34509.1| Deoxyguanosine kinase [Mycoplasma fermentans M64]
          Length = 223

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 21/213 (9%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           GI G   +GK+T    L +  +     +    E          + +         G ++ 
Sbjct: 4   GISGMISSGKSTLTRNLVKHYKNS--MMLKEYEEDDDVFNTFLKWLYEKQPNLTIGFQSY 61

Query: 68  AI-VFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL- 120
            +    +   D  +         +   +  DRF    Y +       +        D+L 
Sbjct: 62  VVENHTSKLADCFKKFSEKGYKYKDNHIFLDRFSIEHYIFANVNLRPKGKKYLEGYDALF 121

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEKRRQI 176
             +  ++  PD  I LD+  D   KR+  R    E+       DYF R+   +++     
Sbjct: 122 SHLITKDETPDLAIFLDMTFDTFKKRLFERGREVETENWNKNKDYF-RELYDLYKPL--- 177

Query: 177 FLDIARNQPDRCHIVDS-AHSFQSVATNILNIV 208
           F+  A+       I+++   + + V    + ++
Sbjct: 178 FIKQAKKYDLNYVIIETDNLTEKQVFEKAVEVI 210


>gi|126330658|ref|XP_001364586.1| PREDICTED: similar to Deoxycytidine kinase [Monodelphis domestica]
          Length = 260

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 30/186 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           I+ EG   AGK+T +++LK+     +++V    V R        +    +         +
Sbjct: 24  IAIEGNIAAGKSTFVNILKQV--SDDWEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R          +   +P +   + +  DR++ +S  
Sbjct: 82  LQMMYEKPERWSFTFQTYACLSRIRAQLSAVNGKFKEAEKPVVFFERSVYSDRYIFASNL 141

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ +  +     +     D +     Q +  D  I L    +  L R+  R    E    
Sbjct: 142 YESDCMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIFLRGREEEQEIP 201

Query: 159 LDYFER 164
           L+Y E+
Sbjct: 202 LEYLEK 207


>gi|323173771|gb|EFZ59400.1| hypothetical protein ECLT68_2089 [Escherichia coli LT-68]
          Length = 252

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + ++  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193


>gi|227494896|ref|ZP_03925212.1| deoxyguanosIne kinase [Actinomyces coleocanis DSM 15436]
 gi|226831348|gb|EEH63731.1| deoxyguanosIne kinase [Actinomyces coleocanis DSM 15436]
          Length = 211

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 37/182 (20%)

Query: 14  GAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           GAGKTT   +L   L      ++ +  + +      TP  +  R                
Sbjct: 3   GAGKTTVSEVLGAELGFMVVKEKVDDSLVLPLFYTSTPDEKEKRRY----------PFLL 52

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ-----GERDSSQHLFLDSL 120
            + F + R   +   +R     G+ ++ DR  + D  +A+      G  D    ++ D L
Sbjct: 53  QLEFLSNRFASIREALR---EGGRRVVMDRSIYEDWYFAHINHQLGGISDLEFKIYSDLL 109

Query: 121 QEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             +      + +  PD  + L    D  L R+  R    E +       + V  + K  +
Sbjct: 110 NNMMQAVAEIPKKAPDLFVYLRGDFDTILDRIAQRGRSFEQSP------ELVSYYRKLWE 163

Query: 176 IF 177
            +
Sbjct: 164 GY 165


>gi|156740117|ref|YP_001430246.1| shikimate kinase [Roseiflexus castenholzii DSM 13941]
 gi|156231445|gb|ABU56228.1| Shikimate kinase [Roseiflexus castenholzii DSM 13941]
          Length = 173

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 66/213 (30%), Gaps = 48/213 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+    I+  G+ G GK+T    L   L    + V  T       A      +    G  
Sbjct: 1   MSMPEIIALVGLSGGGKSTVARHLAARL---GWRVCDTDGLVEQMAGRTIPAIFADEGEG 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F       + AA     +          G I+L DR                      L
Sbjct: 58  AFRERETVALMAA-----LTEPNTIVATGGGIVLRDR------------------NRALL 94

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQI 176
           +E +         + LD P D+ + R++     R     D      E     +  +R  +
Sbjct: 95  REKAF-------VVWLDAPTDVLIARLRAHDEERPLLAGDDPAARLE----TLRAQRAAL 143

Query: 177 FLDIARNQPDRCHIVDSA-HSFQSVATNILNIV 208
           + D+A         +D++  + + VA  I+  +
Sbjct: 144 YRDVAH------VTIDTSEAAPEDVAERIVGAL 170


>gi|73980217|ref|XP_851267.1| PREDICTED: similar to thymidylate kinase family LPS-inducible
           member [Canis familiaris]
          Length = 446

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 46/211 (21%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           AGKTT    +   L+       +   P                  D+         ++  
Sbjct: 11  AGKTTVTQSISDSLKA----ALLKSPPACISQWRKI--------FDDEPTIIRRAFYSLG 58

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLD--SLQEISVQEVM 129
                  + + +      ++ DR+  S+  Y          QHL     S+ +       
Sbjct: 59  NYIVASEIAKESTKSP--VIVDRYWHSTATYAIATEVTGGLQHLPPAHHSIYQWPR---- 112

Query: 130 PDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                  D           +  +  ++R+Q R   R     +     + +  +K    + 
Sbjct: 113 -------DLLKPDLVLLLTVSPEERMRRIQGRGMERTREETEL--EANSIFRQKVEMSYQ 163

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +    P  C +VD++ S + V   +L+I+ 
Sbjct: 164 RM--ENPG-CLLVDASPSREEVLQMVLSIIQ 191


>gi|30262547|ref|NP_844924.1| hypothetical protein BA_2556 [Bacillus anthracis str. Ames]
 gi|47527845|ref|YP_019194.1| hypothetical protein GBAA_2556 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|165868531|ref|ZP_02213191.1| hypothetical protein BAC_2579 [Bacillus anthracis str. A0488]
 gi|167632569|ref|ZP_02390896.1| hypothetical protein BAH_2618 [Bacillus anthracis str. A0442]
 gi|167637556|ref|ZP_02395835.1| hypothetical protein BAQ_2605 [Bacillus anthracis str. A0193]
 gi|170685302|ref|ZP_02876526.1| hypothetical protein BAM_2608 [Bacillus anthracis str. A0465]
 gi|170704749|ref|ZP_02895215.1| hypothetical protein BAK_2646 [Bacillus anthracis str. A0389]
 gi|177649703|ref|ZP_02932705.1| hypothetical protein BAO_2557 [Bacillus anthracis str. A0174]
 gi|190565642|ref|ZP_03018562.1| hypothetical protein BATI_2466 [Bacillus anthracis Tsiankovskii-I]
 gi|227814634|ref|YP_002814643.1| hypothetical protein BAMEG_2044 [Bacillus anthracis str. CDC 684]
 gi|229603292|ref|YP_002866870.1| hypothetical protein BAA_2615 [Bacillus anthracis str. A0248]
 gi|254685123|ref|ZP_05148983.1| hypothetical protein BantC_14890 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254737574|ref|ZP_05195277.1| hypothetical protein BantWNA_20664 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254743243|ref|ZP_05200928.1| hypothetical protein BantKB_19912 [Bacillus anthracis str. Kruger
           B]
 gi|254751889|ref|ZP_05203926.1| hypothetical protein BantV_05471 [Bacillus anthracis str. Vollum]
 gi|254760409|ref|ZP_05212433.1| hypothetical protein BantA9_19036 [Bacillus anthracis str.
           Australia 94]
 gi|30257179|gb|AAP26410.1| hypothetical protein BA_2556 [Bacillus anthracis str. Ames]
 gi|47502993|gb|AAT31669.1| hypothetical protein GBAA_2556 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|164715257|gb|EDR20774.1| hypothetical protein BAC_2579 [Bacillus anthracis str. A0488]
 gi|167514105|gb|EDR89472.1| hypothetical protein BAQ_2605 [Bacillus anthracis str. A0193]
 gi|167532867|gb|EDR95503.1| hypothetical protein BAH_2618 [Bacillus anthracis str. A0442]
 gi|170130550|gb|EDS99411.1| hypothetical protein BAK_2646 [Bacillus anthracis str. A0389]
 gi|170670662|gb|EDT21401.1| hypothetical protein BAM_2608 [Bacillus anthracis str. A0465]
 gi|172084777|gb|EDT69835.1| hypothetical protein BAO_2557 [Bacillus anthracis str. A0174]
 gi|190563669|gb|EDV17634.1| hypothetical protein BATI_2466 [Bacillus anthracis Tsiankovskii-I]
 gi|227004129|gb|ACP13872.1| hypothetical protein BAMEG_2044 [Bacillus anthracis str. CDC 684]
 gi|229267700|gb|ACQ49337.1| hypothetical protein BAA_2615 [Bacillus anthracis str. A0248]
          Length = 186

 Score = 43.9 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 55/222 (24%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56
           MN     I+   + G GKTT    L   L      ++  R       T   +        
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 53

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              D    +   +      + H+   IR + ++  I+      D  +AY           
Sbjct: 54  --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 91

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
              L     Q +  D TI +D P+DI + R   R         D+ E     IH      
Sbjct: 92  ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHY 137

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
               R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 138 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 179


>gi|322383942|ref|ZP_08057672.1| ferrichrome ABC transporter-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321151419|gb|EFX44606.1| ferrichrome ABC transporter-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 263

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGV 59
             G  IS  G  G+GK+T + L+ R L+     V +  +E       + AR + +L    
Sbjct: 25  QKGEIISLLGPNGSGKSTLLKLMARLLEPHQGSVILDGKELASMKTVDVARKLSMLPQMN 84

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           D         +    R  H        L     L+ D
Sbjct: 85  DHQLDLTVRELVEFGR--HPHKPWFQRLDHEDHLIVD 119


>gi|52549652|gb|AAU83501.1| adenylate kinase and related kinases [uncultured archaeon
           GZfos29E12]
          Length = 217

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 21/148 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  G+GK T   LL     +       T         +  R  L         A
Sbjct: 1   MIIVLFGPPGSGKGTQAKLLAE---KYGVPHIST--------GDILRENLKKETKLGLEA 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +         + + V + +   L++ ++   D    S +   G   +      ++L +I 
Sbjct: 50  KT-----YMDKGELVPDDLLIGLIKDRLSESD--CASGFLLDGYPRTLPQA--ETLSKIL 100

Query: 125 VQ-EVMPDCTIILDLPVDIGLKRVQNRY 151
            +     D  + +D+P +  LKR+  R 
Sbjct: 101 TELGKNLDVVLNIDVPDEKLLKRLAGRR 128


>gi|49479445|ref|YP_037731.1| hypothetical protein BT9727_3409 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331001|gb|AAT61647.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 177

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 31/144 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 30  ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 78

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E+ I+     +G +++ DR          F  ++   + + ++    
Sbjct: 79  ----FIANQKMFIEDKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 134

Query: 116 FLDSLQEISVQEVMPDCTIILDLP 139
            L  L+E        D    LD+ 
Sbjct: 135 ELYKLRE-----CRSDAIFYLDVS 153


>gi|282164017|ref|YP_003356402.1| putative adenylyl-sulfate kinase [Methanocella paludicola SANAE]
 gi|282156331|dbj|BAI61419.1| putative adenylyl-sulfate kinase [Methanocella paludicola SANAE]
          Length = 183

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 32/143 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT   +    L+ K   V V          +  R VL       +  E  AIV
Sbjct: 9   GLPGSGKTTIADITADILRVKGVHVKVLN-------IDDVRKVL--TPHATYSLEERAIV 59

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           +AA     +  + +  + EG  ++ D                    L   ++++ ++++P
Sbjct: 60  YAA-----MAYMAKLLVDEGVNVIID----------------ATGNLRQYRDVA-RKLIP 97

Query: 131 DCT-IILDLPVDIGLKRVQNRYS 152
           D   I +  P+D+ ++R + R  
Sbjct: 98  DFVEIYVKCPLDVAIRREEARRG 120


>gi|186682826|ref|YP_001866022.1| adenylate kinase [Nostoc punctiforme PCC 73102]
 gi|186465278|gb|ACC81079.1| adenylate kinase [Nostoc punctiforme PCC 73102]
          Length = 207

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 81/224 (36%), Gaps = 46/224 (20%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV------DE 61
              G  G+GK+T    L R+    +  +  T         E  R  +            E
Sbjct: 4   VILGGSGSGKSTQAQRLGRYF---DIPLIST--------GEILREAISGDQPLPEFRWSE 52

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCD----RF----LDSSYAYQGER 109
                   V+A+  L  +    RP + +G+++    + D    R     ++  +  +G  
Sbjct: 53  ADPRTSLSVYAS--LSELGYHARPYIQKGELVPDEMIIDLIRIRLRQPDINCDWVLEGYP 110

Query: 110 DSS-QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            ++ Q   LD L +   Q++  D  I L +P  + + R   R    +    +  +R+  +
Sbjct: 111 RTAFQAEELDFLLDDLGQKL--DWAIYLQVPEAVMVSRSLGRSLPDDQ--PEIVQRRVEL 166

Query: 169 IHEK---RRQIFLDIARNQPDRCHI-VDSAHSFQSVATNILNIV 208
            +++     + +         RC + ++   S   V  NIL ++
Sbjct: 167 FYDRTIPILEYYDRR------RCLLTINGDQSPDMVQQNILTLL 204


>gi|159028982|emb|CAO87443.1| gmk [Microcystis aeruginosa PCC 7806]
          Length = 184

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 63/212 (29%), Gaps = 35/212 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I   G  G GK T +  L          V  T  P      E   +  L     
Sbjct: 1   MQPGQLIVITGPSGVGKGTLVRHLLTRFPNLYLSVSATTRPPRPGEIEGEDYYFLDRPSF 60

Query: 61  EFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E    A   + +A    +        I   L  G+ ++                    + 
Sbjct: 61  EEKMAAGQFLESAEYAGNYYGTPQSAIAAQLAAGQTVIL------------------EIE 102

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+  +++           IL    +   +R+++R    E+A     E        + R+ 
Sbjct: 103 LEGARQVCQSFPEARRIFILPPSFEELERRLRDRGKDAETAIARRLE--------RARE- 153

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             ++A ++     IV+     ++    I  I+
Sbjct: 154 --ELAASEEFPYQIVN--DDLETALDAIEKII 181


>gi|15805329|ref|NP_294021.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus
           radiodurans R1]
 gi|6457974|gb|AAF09882.1|AE001891_1 deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus
           radiodurans R1]
          Length = 207

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 29/206 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++++  G  G+GK+T   +L      +         P         R       V     
Sbjct: 1   MYVAVSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYHDMRQYSFHSQVYFLSR 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSS-YAY----QGERDSSQHLFL 117
             E          H+  V          ++ DR  F D++ +A      G+         
Sbjct: 61  RLE---------QHLGMVTGARY-----VIQDRTVFEDANIFARNLYESGQMGERDWQTY 106

Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             L E  +  +  PD  I +D  +    +R+  R    E A  D    + +    +    
Sbjct: 107 RGLYEGVLPALRVPDLLIHIDAGLPTLRRRIALRGRDYEQAIPD----EYLAGLNRLYAG 162

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVAT 202
           ++      P     VD       V  
Sbjct: 163 WIAAFDLCP--VVRVDGDA-LDFVHD 185


>gi|157162464|ref|YP_001459782.1| hypothetical protein EcHS_A3164 [Escherichia coli HS]
 gi|188494225|ref|ZP_03001495.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|157068144|gb|ABV07399.1| conserved hypothetical protein [Escherichia coli HS]
 gi|188489424|gb|EDU64527.1| conserved hypothetical protein [Escherichia coli 53638]
          Length = 252

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 34/173 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL------FLDS----LQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +        FL      L +   Q   P+  I L + ++  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERCLYQQMAQ-YRPELIIRLGIDIETAISR 193


>gi|66819705|ref|XP_643511.1| hypothetical protein DDB_G0275667 [Dictyostelium discoideum AX4]
 gi|60471628|gb|EAL69584.1| hypothetical protein DDB_G0275667 [Dictyostelium discoideum AX4]
          Length = 273

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 25/91 (27%), Gaps = 15/91 (16%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G   +GKTT    L          V +  E            +L++       + 
Sbjct: 3  LIVLSGPPCSGKTTRAKELYEHFTNLGKKVIIINE----------ESLLINKNEGYKDSL 52

Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           E           ++      L +  +++ D
Sbjct: 53 TE-----KMTRGSLKGATDRNLSKDTVVISD 78


>gi|224136762|ref|XP_002322409.1| predicted protein [Populus trichocarpa]
 gi|222869405|gb|EEF06536.1| predicted protein [Populus trichocarpa]
          Length = 235

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 58/219 (26%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI+F  G  G+GK T    +        +            A E  R  + S        
Sbjct: 45  FITFVLGGPGSGKGTQCQKIVETF---GFK--------HLSAGELLRREIESNS------ 87

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD---R-------FLDSSYAYQGERDSSQH 114
                       +H   ++   + EG+I+  +   R         DS+      +     
Sbjct: 88  ------------EHWSQMLN-TIKEGRIVPSEVTVRLIQQEMESSDSN------KFLIDG 128

Query: 115 LFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                   I+ +    + P+  +  D P +  +KRV NR   R    +D  +++      
Sbjct: 129 FPRTEENRIAFEQLIGLEPNVVLFFDCPEEEMVKRVLNRNQGRVDDNIDTVKKR-----L 183

Query: 172 KRRQIF-LDIARNQPDRCHI--VDSAHSFQSVATNILNI 207
           K  +I  L +      R  +  +++  +   +   +  I
Sbjct: 184 KVFEILNLPVIDYYSKRGKLCKINAVGTEDEIFEKVRPI 222


>gi|167464791|ref|ZP_02329880.1| iron compound ABC transporter, ATP-binding protein [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 266

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGV 59
             G  IS  G  G+GK+T + L+ R L+     V +  +E       + AR + +L    
Sbjct: 28  QKGEIISLLGPNGSGKSTLLKLMARLLEPHQGSVILDGKELASMKTVDVARKLSMLPQMN 87

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           D         +    R  H        L     L+ D
Sbjct: 88  DHQLDLTVRELVEFGR--HPHKPWFQRLDHEDHLIVD 122


>gi|307718905|ref|YP_003874437.1| cytidylate kinase [Spirochaeta thermophila DSM 6192]
 gi|306532630|gb|ADN02164.1| cytidylate kinase [Spirochaeta thermophila DSM 6192]
          Length = 174

 Score = 43.9 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 52/212 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           + I+  G  G G +T   ++   L  +  NY      +  G P  +  +    S   D +
Sbjct: 1   MIIAISGKSGCGNSTVSRMVAERLGLRWINYTFRNIAQERGVPFEQILKEAQESPKWDLY 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                           ++   +  L EG  +L  R                 ++L     
Sbjct: 61  ----------------LDERQKTFLEEGDCVLGSR---------------LAIWL----- 84

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  P   + L  P+D+  +R++ R        L+  + +D     +  + +  +  
Sbjct: 85  ----APPPAFKVYLFAPLDVRARRIRKREGGTFEEVLEKTKARD----RRDAERYRALYG 136

Query: 183 NQPDRC-----HIVDSA-HSFQSVATNILNIV 208
              DR       ++D+   + + +   I+  V
Sbjct: 137 IDIDRYEEVADLVIDTTELTPEEITERIVGAV 168


>gi|299116916|emb|CBN75026.1| flagellar adenylate kinase [Ectocarpus siliculosus]
          Length = 244

 Score = 43.5 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 42/210 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T  +L+    +   Y      D+       G+  A      +    +     
Sbjct: 61  GGPGSGKGTQCALIAEE-EALGYAHLSAGDLLRAERNSGSELAGMINEFIREGKIVP--- 116

Query: 65  EAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                       +    ++R A+ + GK         S +   G   +  +L        
Sbjct: 117 -----------AEVTVGLLRKAMEKSGK---------SRFLIDGFPRNPDNLA-AWEAST 155

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180
           +   V+ D  + LD P +I  +R+  R            +  +  I ++    R+  + I
Sbjct: 156 AGGAVVVDFALFLDCPEEIMTERIMERGRSSG-----RIDDNEEAIRKRLVTYRESTMPI 210

Query: 181 ARNQPDRCHI--VDSAHSFQSVATNILNIV 208
            +    R  +  V+S  + + VA  +   +
Sbjct: 211 IKEFEARGKLREVNSDQTIEEVAVEVRRHI 240


>gi|116694577|ref|YP_728788.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Ralstonia eutropha H16]
 gi|113529076|emb|CAJ95423.1| sulfate adenylyltransferase subunit 1,adenylylsulfate kinase
           [Ralstonia eutropha H16]
          Length = 644

 Score = 43.5 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 44/166 (26%)

Query: 7   IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I  F G+ GAGK+T  +L+++ L    +  +                 LL       G  
Sbjct: 476 IVWFTGLSGAGKSTIANLVEKRLHALGHHTY-----------------LLDGDNVRHGLN 518

Query: 66  AEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +     A R++    V  V R  L  G I+L         ++     S + +     + 
Sbjct: 519 KDLGFAEADRVENIRRVAEVARLMLDAGLIVL--------VSFISPFRSEREMA----RA 566

Query: 123 ISVQEVMPDCT-IILDLPVDIGLK-------RVQNRYSLRESACLD 160
           ++      D   + +D P+ +  +       R   R  L+    +D
Sbjct: 567 LAGDG---DFVEVFIDTPLAVAEQRDPKGLYRKARRGELKNFTGID 609


>gi|57753877|dbj|BAD86807.1| hypothetical protein [Streptomyces sp. KO-3988]
          Length = 260

 Score = 43.5 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 14/174 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDEF 62
           F    G + AGK++ ++ L   +    +    T +    G        R  ++   +   
Sbjct: 57  FYVLLGPDYAGKSSVMTELSAAMP--GWQTLSTDDDLVAGEHRLISQLRRNVVRDVLPGL 114

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDS 119
           G    A  F A+ L      +R  L   +    +L D +     A    +     L +  
Sbjct: 115 GPTYSAD-FLASLLGTAVVHLRDQLERQEPDVPVLMDSYYYKILA----KCRLAGLEMHP 169

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEK 172
           L        +P   I LD+  +   +R      L       D  E      ++K
Sbjct: 170 LYTWWRSFPLPRGVIYLDVSPETAWRRSGRGAQLNPLEHFGDRPEWFGFESYQK 223


>gi|71408482|ref|XP_806642.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|42560502|gb|AAS20418.1| adenylate kinase 4 [Trypanosoma cruzi]
 gi|70870447|gb|EAN84791.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 260

 Score = 43.5 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 57/221 (25%), Gaps = 48/221 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  GAGK T    + +          DV        T   E   + +           +E
Sbjct: 58  GPSGAGKRTQSRRIAQKYGAVVVNADDVFREEMSKETKEGEKVANCMREGIPVPHDVASE 117

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            I         +  +          +L               +       ++L  +    
Sbjct: 118 LI---------IRRLKMEDANSNGWVL---------------NGFPRTRSEAL-RLQTAG 152

Query: 128 VMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY-FERKDVMIHEK 172
           + P   I+LDLP ++ ++R   R                  E   ++  FE  D +    
Sbjct: 153 ISPLFFILLDLPYEVAVQRCNGRRYDPITQNVYHMEFCPPPEGMAVERMFEDDDSLAAVV 212

Query: 173 RRQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            R  +      ++          +D       V+  I   V
Sbjct: 213 SRWKYFDARKDELIECYEPVFVRIDGNRPVDVVSQEIFEQV 253


>gi|149199203|ref|ZP_01876241.1| sulfate adenylyltransferase, large subunit subfamily, putative
           [Lentisphaera araneosa HTCC2155]
 gi|149137628|gb|EDM26043.1| sulfate adenylyltransferase, large subunit subfamily, putative
           [Lentisphaera araneosa HTCC2155]
          Length = 514

 Score = 43.5 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  + F G+ G+GK+T    L   L  +   V+                  L      
Sbjct: 342 HKGCVLWFTGLSGSGKSTIAKALMAELHAQGKHVNS-----------------LDGDNVR 384

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
           FG  ++    A  R +++     + +  +  G I+LC
Sbjct: 385 FGLCSDLGFTAKDRSENIRRIGELAKLFMENGNIVLC 421


>gi|78780016|ref|YP_398128.1| adenylate kinase [Prochlorococcus marinus str. MIT 9312]
 gi|78713515|gb|ABB50692.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9312]
          Length = 182

 Score = 43.5 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 75/214 (35%), Gaps = 43/214 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M   L   F G  GAGK T   LL +   +L     ++        T      + ++   
Sbjct: 1   MKKHLL--FLGAPGAGKGTQAELLSKTNSYLHLSTGELLRKEIETNTNLGRQVKDII--N 56

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +                + V  ++R  L +          +  +   G   +      
Sbjct: 57  RGELVSD------------ELVLKIVRQNLDQD---------NKGWILDGYPRNLSQA-- 93

Query: 118 DSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ- 175
           +SL E+ ++   P +    LD+P ++ +KR+  R    ++          V I++K  + 
Sbjct: 94  NSLNEVLIEINQPLEVVFYLDIPEEVLIKRLLLRGRKDDTEETIR---TRVDIYKKTTEP 150

Query: 176 ---IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
               F D++  +      +D+    ++++++I  
Sbjct: 151 LIKYFKDLSLLEY-----IDADRDLKTISSDIKQ 179


>gi|312217166|emb|CBX97115.1| similar to UMP-CMP kinase [Leptosphaeria maculans]
          Length = 227

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 45/214 (21%)

Query: 11  GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDEF 62
           G  GAGK T    L      + L   +    + RE     G+   E  +  +    +   
Sbjct: 29  GGPGAGKGTQCQNLVSDYGFKHLSAGD----LLREEQDRPGSEFGEMIKTYIKEGTIVPM 84

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEG----KILLCDRFLDSSYAYQGERDSSQHLFLD 118
               + +          EN ++ ++  G    K+ L D F                  LD
Sbjct: 85  EVTIKLL----------ENAMKASMESGQNEKKLFLIDGF---------------PRKLD 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                         T+  D    +  KR+ +R         D  E           +  +
Sbjct: 120 QAHAFERSVCPSKFTLFFDCSEAVMEKRLLHRGET-SGRADDNLESIKKRFRTFV-ETSM 177

Query: 179 DIARNQP--DRCHIVDSAHSFQSVATNILNIVWE 210
            + +      R   V++  S + V  ++   + E
Sbjct: 178 PVVKEFESQGRVVKVNAERSPEEVYRDVQEKLKE 211


>gi|167628073|ref|YP_001678573.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|167598074|gb|ABZ88072.1| Cytidylate kinase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 222

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 64/239 (26%), Gaps = 45/239 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKN----YDVHVTREPGGT-----PAA 47
           MN+   I+ +G  G GK T    L ++    L                 G          
Sbjct: 1   MNNSKIITVDGPSGVGKGTLSKKLAKYFDYKLLDSGAIYRIAALHCYNAGANLDNQDDVC 60

Query: 48  EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
                  L             ++  A     +       L              + AY  
Sbjct: 61  NKLES--LDISFKVENDSIIVLLNNADVTKAIRTEQTGMLAS-----------KTSAYPK 107

Query: 108 ERDSSQHLFL--DSLQEISVQE------VMPDC--TIILDLPVDI-GLKRVQNRYSLRES 156
            R       L   +   +          V PD      LD   ++   +R     +  E+
Sbjct: 108 VRQMLHDKMLSFATAAGLVADGRDMGTVVFPDAKYKFFLDASSEVRAQRRYDELLTKGEN 167

Query: 157 ACLDYF--ERKDVMIHEKRRQIFLDIARNQP-DRCHIVD-SAHSFQSVATNILNIVWEL 211
              D    + +     ++ R     +A  +P D   +VD S  S + V   +L+ +  L
Sbjct: 168 PDFDKIKNDIEQRDFQDRNR----KVAPLKPADDAILVDTSNLSIEEVFQKVLSHINNL 222


>gi|159904596|ref|YP_001548258.1| signal recognition particle-docking protein FtsY [Methanococcus
           maripaludis C6]
 gi|159886089|gb|ABX01026.1| signal recognition particle-docking protein FtsY [Methanococcus
           maripaludis C6]
          Length = 379

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 15/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI G GKTT IS L   L+ + Y V +    G T  A A   +       +   +     
Sbjct: 179 GINGTGKTTSISKLAYILKERGYSVVMAA--GDTFRAGAIEQLEEHGKNTDI--KVIKHQ 234

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             A     + + I  +  +G  ++L D            R ++    +D +++  V+   
Sbjct: 235 KGADSAAVIYDAINHSKAKGINVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 284

Query: 130 PDCTII 135
           PD  I 
Sbjct: 285 PDLIIF 290


>gi|50555588|ref|XP_505202.1| YALI0F09339p [Yarrowia lipolytica]
 gi|49651072|emb|CAG78009.1| YALI0F09339p [Yarrowia lipolytica]
          Length = 212

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 48/213 (22%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L        L   +    + RE    P ++  + +       +   +
Sbjct: 26  GGPGAGKGTQCEKLVNEYGFVHLSAGD----LLREEQSRPNSQYGKLIADCIKAGDIVPQ 81

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                     +  ++N ++ ++ +GK     RFL       G         L   ++++V
Sbjct: 82  E-------VTIGLLKNAMKESVAKGKT----RFLID-----GFPRKMDQA-LKFEEDVAV 124

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182
            +     T+  + P ++ LKR+  R         D  E          R+ F+       
Sbjct: 125 SKF----TLFFECPEEVMLKRLLKRGET-SGRTDDNIES--------IRKRFVTFIETSM 171

Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVW 209
                    DR  +VD       V  N+ + + 
Sbjct: 172 PVVDYFETQDRVVVVDCKQDPDVVYDNVKDALH 204


>gi|71653446|ref|XP_815360.1| adenylate kinase [Trypanosoma cruzi strain CL Brener]
 gi|42560504|gb|AAS20419.1| adenylate kinase 5 [Trypanosoma cruzi]
 gi|70880410|gb|EAN93509.1| adenylate kinase, putative [Trypanosoma cruzi]
 gi|322816045|gb|EFZ24496.1| adenylate kinase, putative [Trypanosoma cruzi]
          Length = 198

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 47/216 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  G+GK T    L +      +            A +  R    S   D     AE 
Sbjct: 12  FLGGPGSGKGTACDYLVKEF---GF--------THFSAGDLLREASKSNKSDVEKKIAEI 60

Query: 69  IVF-----AAARLDHVENVI-RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           I       +   ++ + N I       G I+             G         +     
Sbjct: 61  IRMGNIVPSEITVELLSNAIAEHPNPRGYII------------DGFPRKMDQALMFE--- 105

Query: 123 ISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVMIHEKRRQ 175
              + + P       D   +    RV +R         D  E      R +V +     +
Sbjct: 106 ---EGIAPAKGIFYFDCHEETMEARVLHRAKEGSGRDDDDIEVLRRRFRTNVELCMPVVE 162

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +        +R H +D+  S + V  ++  ++ +L
Sbjct: 163 RY-----KAENRLHTIDANRSREEVYGDVKRVMLQL 193


>gi|262089273|gb|ACY24494.1| putative thymidylate kinase [uncultured crenarchaeote 57a5]
          Length = 108

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 40/105 (38%), Gaps = 11/105 (10%)

Query: 126 QEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL-------DYFERKDVMIHEKRRQIF 177
             + P+      +P+DI + R+   R  L+            D +E   +    +    +
Sbjct: 3   FAIKPEIVFYFKVPIDIAVDRILAGRPRLKYYEAGMDLNLSNDPYESYRI-FQSRIIDQY 61

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             ++ +  +   IVD     +   + + +IV +L+   ++  + +
Sbjct: 62  ESLSIS--ENFTIVDGTMEIEESQSYLRSIVSKLLPLNITKNTRR 104


>gi|229011814|ref|ZP_04168995.1| uridine kinase [Bacillus mycoides DSM 2048]
 gi|228749445|gb|EEL99289.1| uridine kinase [Bacillus mycoides DSM 2048]
          Length = 189

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 17/88 (19%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183
           D TI +D P+DI + R   R         D+ E     IH          R+ +L+    
Sbjct: 104 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 154

Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+   ++D + S   +   I+  +  
Sbjct: 155 VKPNSDIVLDGSLSISEIIDQIIEELNR 182


>gi|254409923|ref|ZP_05023703.1| Adenylate kinase superfamily [Microcoleus chthonoplastes PCC 7420]
 gi|196182959|gb|EDX77943.1| Adenylate kinase superfamily [Microcoleus chthonoplastes PCC 7420]
          Length = 204

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 67/232 (28%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDEFGAE 65
           G  G+GK+T    L R L                 +    R  +     L      +  +
Sbjct: 4   GGPGSGKSTQARQLCRHL---GIVEI--------SSGNILRRAIAAQTDLGRKAQPYVEK 52

Query: 66  AEA----IVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            E     I+    R   +E + ++  ++EG             A+Q E        L+  
Sbjct: 53  GELVPDEILIEFMRQRLLEPDTVKGWVLEG---------YPRTAFQAEELDFLLEDLNQQ 103

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----------------DYFE 163
            + +         I L +P  + + R   RY   E                     D+ E
Sbjct: 104 LDWA---------IYLTVPESVMMTRSVARYVPSEQTPPTQNQAQDSTPSTKSRLDDHPE 154

Query: 164 ---RKDVMIHEK---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
              R+  + +E+     + +     +   +   ++     + V  NI + + 
Sbjct: 155 IVPRRIQLFYERTVPILEYY-----DYRQKLLTINGDQPPEQVQQNIWHKLE 201


>gi|326528033|dbj|BAJ89068.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 213

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 63/222 (28%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 34  GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 73

Query: 71  FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114
                      +I   + EGKI+                  D+FL   +     R+    
Sbjct: 74  ----------TMIENMIKEGKIVPSEVTIKLLQQAMIKNENDKFLIDGF----PRNEENR 119

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
              +++ +IS     P   +  +   +   +R+  R   R    ++   ++  +  E   
Sbjct: 120 AAFENVTKIS-----PAFVLFFNCSEEEMERRLLGRNEGRVDDNIETIRKRFKVFVESSL 174

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              + +     +  D+   +D+A     V  ++  I     +
Sbjct: 175 PVIEYY-----DAKDKVKKIDAAKPIPEVFEDVKAIFAPFAK 211


>gi|326516732|dbj|BAJ96358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 277

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 42/152 (27%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  + +  +                 +L      
Sbjct: 98  QKGCVIWITGLSGSGKSTVACALSRELHYRGHHTY-----------------VLDGDNLR 140

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
            G   +    A  R +++     V +     G I +      S  + Y+ +RD       
Sbjct: 141 HGLNRDLSFKAEDRTENIRRVGEVAKLFADAGTICIA-----SLISPYRRDRD------- 188

Query: 118 DSLQEISVQEVMPD---CTIILDLPVDIGLKR 146
                 + + ++PD     + +DLP++I   R
Sbjct: 189 ------ACRALLPDSRFIEVFMDLPLEICEAR 214


>gi|71417267|ref|XP_810517.1| adenylate kinase [Trypanosoma cruzi strain CL Brener]
 gi|70875059|gb|EAN88666.1| adenylate kinase, putative [Trypanosoma cruzi]
          Length = 198

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 59/215 (27%), Gaps = 45/215 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  G+GK T    L +      +            A +  R    S   D      E 
Sbjct: 12  FLGGPGSGKGTACDYLVKEF---GF--------THFSAGDLLREASKSNKSDVEKKITEI 60

Query: 69  IVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           I       +   ++ + N I         ++            G         +      
Sbjct: 61  IRMGNIVPSEITVELLSNAIAEHPNPRGYVI-----------DGFPRKMDQALMFE---- 105

Query: 124 SVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVMIHEKRRQI 176
             + + P       D   +    RV +R         D  E      R +V +     + 
Sbjct: 106 --EGIAPAKGIFYFDCHEETMEARVLHRAKEGSGRDDDDIEVLRRRFRTNVELCMPVVER 163

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +        +R H +D+  S + V  ++  ++ +L
Sbjct: 164 Y-----KAENRLHTIDANRSREEVYGDVKRVMLQL 193


>gi|302842953|ref|XP_002953019.1| adenylate kinase [Volvox carteri f. nagariensis]
 gi|300261730|gb|EFJ45941.1| adenylate kinase [Volvox carteri f. nagariensis]
          Length = 231

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 66/205 (32%), Gaps = 36/205 (17%)

Query: 7   ISF-EGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I F  G  G+GK T    +     +      D+       GT   +    ++ S  +   
Sbjct: 6   IVFVLGAPGSGKRTQCEKIVENYGWTHLSTGDLLREEVLAGTELGQQVNEIMASGQMVPT 65

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E +  A A               G      RFL   +             LD L E
Sbjct: 66  DLILEMLTNAMA-------------SSG----SSRFLIDGF----------PRTLDQLME 98

Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIFLD 179
              Q V P D  ++  +P ++ ++R+  R   S R     D   R+ + +     Q  ++
Sbjct: 99  FQTQ-VKPCDGVLVFSVPEEVAVERLLARGVTSGRVDDNEDAI-RERMNLFWSDSQPVIE 156

Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204
              +     H VDSA   + V   +
Sbjct: 157 FLADSGGNLHEVDSAAPEEEVFAAV 181


>gi|289450230|ref|YP_003475458.1| signal recognition particle protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184777|gb|ADC91202.1| signal recognition particle protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 452

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 18/154 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L + L+ +     VT      PAA    ++L          + +   
Sbjct: 109 GLQGSGKTTTAAKLGKILKSRGKKPLVTSVDTHRPAAAEQLNIL--------CDKIQVPC 160

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           +      H   + R A+   K LLCD    +       R +     +  L+E+    V P
Sbjct: 161 YINPPEKHAAKIAREAVERAKYLLCD----TLIVDTAGRMTIDEELMQELKELE-NTVKP 215

Query: 131 D--CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           D    I   +   IG + V           LD F
Sbjct: 216 DERLLI---VDSMIGQEAVNIALEFERQIGLDGF 246


>gi|148655316|ref|YP_001275521.1| nucleoside-triphosphate--adenylate kinase [Roseiflexus sp. RS-1]
 gi|148567426|gb|ABQ89571.1| Adenylate kinase [Roseiflexus sp. RS-1]
          Length = 226

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 39/162 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T      ++L+     VHV          +  R  L         A++
Sbjct: 3   IILLGAPGAGKGTQ----AKYLEEHTGMVHVAS-------GDLFRAALRQGTELGMLAKS 51

Query: 67  EAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   R + V          E + +P    G  ++ D F          R   Q   
Sbjct: 52  -----YMDRGELVPDEVVIRMIVERISQPDCSRG--VIFDGF---------PRTREQARA 95

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           L++  E++ Q    D  + + +P D+ L+R+  R + +    
Sbjct: 96  LEA--ELNKQGRRIDVVLYIRVPEDMLLRRIAGRQTCKTCGS 135


>gi|145588521|ref|YP_001155118.1| adenylyl-sulfate kinase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046927|gb|ABP33554.1| Adenylyl-sulfate kinase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 195

 Score = 43.5 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G  I F G+ GAGK+T  + L+  L  +     +          +  R  L       
Sbjct: 27  QTGKIIWFTGLSGAGKSTLANALEIQLHEQGKQTFLL-------DGDVVRQGLNQDLGFS 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                E       R+ HV  ++  A   G I++C
Sbjct: 80  DQDRTE----NIRRIAHVAKLMMDA---GLIVIC 106


>gi|307637305|gb|ADN79755.1| Adenylate kinase [Helicobacter pylori 908]
 gi|325995896|gb|ADZ51301.1| Adenylate kinase [Helicobacter pylori 2018]
 gi|325997491|gb|ADZ49699.1| Adenylate kinase [Helicobacter pylori 2017]
          Length = 191

 Score = 43.5 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVEAILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D    + V  H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +A              ++   S + +   +   +   
Sbjct: 151 DPLAEIQNFYKNKKVYKAINGERSIEEIVNEMQKYILSF 189


>gi|168024344|ref|XP_001764696.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683990|gb|EDQ70395.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 352

 Score = 43.5 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 15/175 (8%)

Query: 9   FEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
            EG    GK+T +  +    L+ ++    V    G      A  H +L     E    A 
Sbjct: 49  VEGNISVGKSTFLQRIASETLELQDLVEIVPEPVGKWQDVGANHHNILESFYKEPERYAY 108

Query: 68  AI---VFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSL 120
                VF    +   E  + I+P  +  + +  DR +     ++ +  S   + +     
Sbjct: 109 TFQNYVFVTRLMQERESAHGIKPLRLMERSVFSDRMVFVRAVHEAKWMSEMEISIYDSWF 168

Query: 121 QEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEK 172
             +   +  ++PD  I L    D  ++R+ +R    E+   L+Y +     +HEK
Sbjct: 169 NPVVSELPGLVPDAFIYLRASPDTCMQRLHSRKRPEENGVSLEYLQ----GLHEK 219


>gi|197123620|ref|YP_002135571.1| ABC transporter [Anaeromyxobacter sp. K]
 gi|196173469|gb|ACG74442.1| ABC transporter-related protein [Anaeromyxobacter sp. K]
          Length = 310

 Score = 43.5 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 68/245 (27%), Gaps = 58/245 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF--GAEAE 67
           G +GAGKTT I  L   L     +  V    G  P + A R  L L             E
Sbjct: 47  GPDGAGKTTAIRALAGLLALDGGEAQV---LGADPLSGANRERLGLMPQQYSLYRDLTVE 103

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLC--DRFLD------SSYAY-------------- 105
             +   ARL  +   +     E  + +   DRF D      S   Y              
Sbjct: 104 ENLHFFARLYVLPRAVYRERKERLLGITRLDRFTDRRADALSGGMYKKLALACALLHEPE 163

Query: 106 --------QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP--------VDIGL-KRVQ 148
                    G    S+      L E          T+++  P          + L  R +
Sbjct: 164 VLLLDEPTNGVDPVSRRELWALLHEFVHGG----MTVLVSTPYMDEAERCSRVALVHRGR 219

Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP---------DRCHIVDSAHSFQS 199
                   A +  FE +   +H   R+         P          R  +V +  +   
Sbjct: 220 ALLDGEPGALIARFEDEAYEVHGGDRERLDAALAAHPAVLAASPAGARLKVVVARGARDE 279

Query: 200 VATNI 204
           VA  I
Sbjct: 280 VARAI 284


>gi|328880628|emb|CCA53867.1| Deoxyadenosine kinase or Deoxyguanosine kinase [Streptomyces
           venezuelae ATCC 10712]
          Length = 220

 Score = 43.5 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 47/164 (28%), Gaps = 34/164 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKT+   L+ R L     +V         P       +  +   +E  A+    +   
Sbjct: 11  GIGKTSVAELIARDL---GSEVFYES-VDDNPILP----LFYTASPEEIQAKRYPFLLQL 62

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGERDSSQHLFLD 118
             L      I+ A  +G  +L DR +                SS   Q        +  +
Sbjct: 63  YFLQTRFAAIKEAYKQGDNVL-DRSIYEDWYFAKVNHDLGRISSLEMQVYEGLLDEMMRE 121

Query: 119 SLQEISVQEV----MPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                 +  +     PD  + L    +  L R+  R    E   
Sbjct: 122 ------IDGLPYRKAPDLMVYLKADFETVLHRIGLRGRDFEQDE 159


>gi|156378247|ref|XP_001631055.1| predicted protein [Nematostella vectensis]
 gi|156218088|gb|EDO38992.1| predicted protein [Nematostella vectensis]
          Length = 4294

 Score = 43.5 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 25/118 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T   LL+  L +    V   T  P   P  +    +       E+   
Sbjct: 1984 VVI-GPSGSGKSTIWRLLRLALGKIGQTVKQYTMNPKAMPRTQLLGQI--DMDTREWSDG 2040

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  AAR      V+R  +     ++CD                   +++SL  +
Sbjct: 2041 ---VLTNAAR-----QVVREPIDIQSWIICD-------------GDIDPEWIESLNSV 2077


>gi|332159482|ref|YP_004424761.1| cytidylate kinase [Pyrococcus sp. NA2]
 gi|331034945|gb|AEC52757.1| cytidylate kinase [Pyrococcus sp. NA2]
          Length = 192

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 48/218 (22%)

Query: 1   MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G   I+  G+ G+G TT    +  +                  A    R +    G+
Sbjct: 1   MPKGKLVITVSGLAGSGTTTLSKKIAEY---YGLKHVY--------AGLIFRQMAKERGM 49

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                +  A +      + V+     A  EG +++             E   +  +  ++
Sbjct: 50  TLEEFQKYAELHPEIDRE-VDRRQIEAAKEGNVVI-------------EGRLAGWMVKNA 95

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178
                      D  I LD P+ +  +RV  R  +          ER+      + R+ +L
Sbjct: 96  -----------DLKIWLDAPIRVRAERVAKREGISVEEAFMKIAERE-----MQNRKRYL 139

Query: 179 DIARNQPDRC----HIVDSAH-SFQSVATNILNIVWEL 211
           ++     +       I+++A  S + V   +   +  L
Sbjct: 140 NLYGIDINDLSIYDLIINTAKWSPEGVFAIVKAAIDHL 177


>gi|322368143|ref|ZP_08042712.1| signal recognition particle-docking protein FtsY [Haladaptatus
           paucihalophilus DX253]
 gi|320552159|gb|EFW93804.1| signal recognition particle-docking protein FtsY [Haladaptatus
           paucihalophilus DX253]
          Length = 372

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 18/156 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAE 65
           I F G+ G GKTT I+ L R+ + + Y   +         A +  R        D    +
Sbjct: 174 IIFTGVNGVGKTTSIAKLSRYFEERGYSSVMANGDTYRAGANQQIRE-----HADALDTK 228

Query: 66  AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A          + + +  A      I+L D            R  +    +D L++I 
Sbjct: 229 LIAHEQGGDPAAVIYDAVEYADAHDIDIVLGD---------TAGRLHTSEGLMDQLEKIG 279

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            + V PD TI +D     G   VQ      E+A +D
Sbjct: 280 -RVVDPDMTIFVD-EAVAGQDAVQRAKEFDEAAEID 313


>gi|320195134|gb|EFW69763.1| hypothetical protein EcoM_02899 [Escherichia coli WV_060327]
          Length = 256

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 27  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 87  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + +D  + R
Sbjct: 146 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 197


>gi|118380994|ref|XP_001023659.1| hypothetical protein TTHERM_00732610 [Tetrahymena thermophila]
 gi|89305426|gb|EAS03414.1| hypothetical protein TTHERM_00732610 [Tetrahymena thermophila
           SB210]
          Length = 1342

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 14/82 (17%)

Query: 7   ISF-EGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGT---PAAEAARHVLLSCGVDE 61
           I+  +G  G+GKTT    ++  +L+  N  + VT E  GT      E  +    +     
Sbjct: 920 ITIVQGPPGSGKTTAAVEIVLEWLRASNQPILVTAESQGTVNIIYGELIKA---NVKAVT 976

Query: 62  FGAEAEAIVFAAARLDHVENVI 83
            G   E       RLDH+  +I
Sbjct: 977 IGPGFE------DRLDHINEII 992


>gi|268611362|ref|ZP_06145089.1| hypothetical protein RflaF_17914 [Ruminococcus flavefaciens FD-1]
          Length = 186

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 21/158 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI  EG  G GKTT  S+L    ++ N++            AE  +             
Sbjct: 1   MFIVIEGDNGTGKTTVASILN---KKHNFEFIT----EHPDIAELEKQA--KGFDIGSIK 51

Query: 65  EAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFLDSLQ 121
             EA + +  A  +  +  I+  L         R+  S+ A  G  D        L    
Sbjct: 52  RFEAFLDYNRACGEQSKKHIKSVLA--------RYWISTIA-AGYADKLFDINESLTRAD 102

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
            +      PD    L    +  ++R++ R     +  +
Sbjct: 103 SVIKTMPRPDHIFRLKCSFEKRIERIEQRALSDGNDDI 140


>gi|262285067|gb|ACY41095.1| thymidine kinase [Wood mouse herpesvirus]
          Length = 647

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 71/239 (29%), Gaps = 60/239 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-------EAARHVLLSCGVDE 61
           F+G  G GKTT +     FL    +++ V  EP     +       +    V+ +    +
Sbjct: 334 FDGGIGVGKTTALEAAAEFL----HNILVIPEPIPYWTSTFDKNVCQQIYDVVRTKEKGK 389

Query: 62  FGA-------EAEAIVFAAARLDHVENVIRPALMEGK---ILLCDRFLDSSYA-----YQ 106
             +        A A  F A +       +   + +G     +L DR + S        + 
Sbjct: 390 KHSKKVLQCQMAFAQPFFATQHLLRRTCLGTKVSDGTCNNHVLIDRHMMSPTVLFPCLFF 449

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                     +  L   S Q    D  I+  L   + + R++ R    E           
Sbjct: 450 RLGVLKFGDLISLLSMFSAQCF--DNIILFKLNPRVAVTRIKERGRNPEGV--------- 498

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAH---------SFQSVATNILNI--VWELVQK 214
                     +L +         +VD+             + +   IL+   V  + QK
Sbjct: 499 ------INHGYLKLLNE------VVDAIFCAWELLAIVPPEVIVEAILSQTPVKRIFQK 545


>gi|239948298|ref|ZP_04700051.1| adenylate kinase [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239922574|gb|EER22598.1| adenylate kinase [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 212

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +           +       +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  +L  +    + Y   G   + +       +   
Sbjct: 45  EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFV 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KRV  RYS +    +                      DY 
Sbjct: 101 KEKIK---IIYFDVSDELLIKRVLGRYSCKNCGKIYNSYFLQPKTDNVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +  + +KR +++      +          +IV+ + + Q +  +I  I+ 
Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210


>gi|323188586|gb|EFZ73871.1| hypothetical protein ECRN5871_3005 [Escherichia coli RN587/1]
          Length = 252

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193


>gi|296170074|ref|ZP_06851677.1| sulfate adenylate transferase/adenylyl-sulfate kinase
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295895284|gb|EFG74994.1| sulfate adenylate transferase/adenylyl-sulfate kinase
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 230

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 17/148 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  +L+++ L  +     +           A   +L      E
Sbjct: 23  HRGCVIWFTGLSGSGKSTVANLVEQKLYERGVRSFLLDGDNVRYGLNAGPGILEERHGSE 82

Query: 62  FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           F         A  R +++  +    +     G I L         A+       +     
Sbjct: 83  FAQRFGLGFSAQDREENIRRIGAVSKLFCEAGVIALT--------AFISPYRRDRDAVRA 134

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +L +   QE      I +D P+++  +R
Sbjct: 135 TLSDGDFQE------IFIDTPIEVCEQR 156


>gi|328478173|gb|EGF48017.1| adenylate kinase [Lactobacillus rhamnosus MTCC 5462]
          Length = 214

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 72/239 (30%), Gaps = 73/239 (30%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    ++            T         +  R  +        G EA+  +
Sbjct: 7   GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               +   V + +   +++ ++   D   D+ Y   G   + Q    ++L+ I+     P
Sbjct: 54  ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106

Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166
            D  I +D+     + R+  R                     +       ++F+R+D   
Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166

Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                            +  ++K  +  L          H V+       V  +I  I+
Sbjct: 167 ETVKNRLKVNIAMNTPLLDFYQK--KGLL----------HTVNGDQDIDKVFADIKTIL 213


>gi|67458691|ref|YP_246315.1| adenylate kinase [Rickettsia felis URRWXCal2]
 gi|75536847|sp|Q4UMQ8|KAD_RICFE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|67004224|gb|AAY61150.1| Adenylate kinase [Rickettsia felis URRWXCal2]
          Length = 212

 Score = 43.5 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 81/233 (34%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +           +       +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  +L  +    + Y   G   + +       +   
Sbjct: 45  EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KRV  RYS +    +                      DY 
Sbjct: 101 KEKIK---IIYFDVSDELLIKRVLGRYSCKNCGKIYNSYFLQPKTDNVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +  + +KR +++      +          +IVD + + Q +  +I  I+ 
Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVDGSKNEQEIEIDIQKILK 210


>gi|315226179|ref|ZP_07867967.1| deoxyguanosine kinase [Parascardovia denticolens DSM 10105]
 gi|315120311|gb|EFT83443.1| deoxyguanosine kinase [Parascardovia denticolens DSM 10105]
          Length = 253

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 24/162 (14%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VF 71
           AGK+T   +L   L             +    P       ++     +     A  + V+
Sbjct: 21  AGKSTLTQILSDEL---GTKAFFEPVEDNPVLPLFYHGNKLVEEGKAET-NPYAFLLQVY 76

Query: 72  AAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQH-----LFLDSL 120
              R   +   I+ A+ E   +L DR  + DS +      QG     +      L  + L
Sbjct: 77  FLNRRFAM---IKKAMQEDNNIL-DRSIYEDSIFMKMNTDQGHATEEEWNIYKSLLDNML 132

Query: 121 QEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +E+  + ++  PD  I +D+ ++  L RV+ R    E    D
Sbjct: 133 EELPYAAKKKSPDLMIFVDVNLETMLYRVKKRGRPFEQVDED 174


>gi|188592308|ref|YP_001796906.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Cupriavidus taiwanensis LMG 19424]
 gi|170938682|emb|CAP63669.1| bifunctional enzyme: ATP-sulfurylase large subunit (Sulfate
           adenylate transferase)(SAT) and Adenylyl-sulfate kinase
           (APS kinase) (ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase) [Cupriavidus taiwanensis LMG
           19424]
          Length = 640

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 51/173 (29%), Gaps = 58/173 (33%)

Query: 7   IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I  F G+ GAGK+T  +L+++ L    +  +                 LL       G  
Sbjct: 472 IVWFTGLSGAGKSTIANLVEKRLHALGHHTY-----------------LLDGDNVRHGLN 514

Query: 66  AEAIVFAAARLD---HVENVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQH 114
            +     A R++    V  V R  L  G I+L         +R      A     D    
Sbjct: 515 KDLGFSEADRIENIRRVAEVARLMLDAGLIVLVSFISPFRSER----EMARALAGDGEFI 570

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLK-------RVQNRYSLRESACLD 160
                              + +D P+ +  +       R   R  L+    +D
Sbjct: 571 E------------------VFIDTPLAVAEQRDPKGLYRKARRGELKNFTGID 605


>gi|149020738|gb|EDL78543.1| rCG31851, isoform CRA_b [Rattus norvegicus]
          Length = 2120

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
             +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     
Sbjct: 1342 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 1394

Query: 61   EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    ++ ++  +AR      V+R        ++CD                   +++SL
Sbjct: 1395 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 1436

Query: 121  QEI 123
              +
Sbjct: 1437 NSV 1439


>gi|326925200|ref|XP_003208807.1| PREDICTED: adenylate kinase isoenzyme 5-like [Meleagris gallopavo]
          Length = 602

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 68/231 (29%), Gaps = 48/231 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
            FI   G  G+GK++    L +      L     D+        +  ++  + ++     
Sbjct: 409 FFIV--GGPGSGKSSQCEQLAKKYGFTHLSAA--DLLQNELSSLSERSKFIKDIMECGEP 464

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              G   E +          +  +  +L + K  L D +                  L  
Sbjct: 465 VPGGIVLELL----------KEAMITSLEDTKGFLIDGY---------------PRELKE 499

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +E   +   P     LD   +    R   R    + +  +   ++ +       + +  
Sbjct: 500 AEEFESKIGEPKLVFCLDCSAESMNSRSLMRNQTSQHSNAETI-KEGI-------EGYYQ 551

Query: 180 IAR---NQPDR---CHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
            A+      +R      VD+  + + V   +   +   + K  +  S++  
Sbjct: 552 AAKPLTAYYERKTQLCKVDAEGTAEDVFLEVCKSIDSFLNKEAAAFSTETQ 602


>gi|313212897|emb|CBY36805.1| unnamed protein product [Oikopleura dioica]
          Length = 329

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 85/254 (33%), Gaps = 56/254 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----------GGTPAAEAARHVLLS 56
           IS EG    GK+T I +L+     +++++  T EP           G+ +      +   
Sbjct: 44  ISIEGNIATGKSTFIKILEEAAGTEDWEI--TPEPVSTWTQIEGKNGSSSGGNLLKLFYD 101

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                        + +  RL       +P   A +  + +  DR++   +A         
Sbjct: 102 DAKRWSYTFQSFALLSRMRLQRA--PFKPRTVARLSERSIHSDRYI---FARNCFETGLM 156

Query: 114 HL------------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLD 160
                          L+SL ++ +        I L     +  KR+  R    E    L+
Sbjct: 157 TETEWSIYKDWSTYLLESLGDLQLDGF-----IYLRCDPKVCDKRMAKRGRPEEQGVTLE 211

Query: 161 YF----ERKDVMIHEKRRQIFL--DIARNQPDRCHIVDSAHSF---QSVA----TNILNI 207
           Y     E+ +  +H +    F   DI ++ P     +D    F   + +       +   
Sbjct: 212 YLSQLHEKHEKWLHNR---EFHDEDIMQDIP--ILEIDCNEEFHDDEEIKSKMLQQVREF 266

Query: 208 VWELVQKRVSPLSS 221
           V ++ +KR   LSS
Sbjct: 267 VRQVQEKRQEKLSS 280


>gi|73662526|ref|YP_301307.1| putative shikimate kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82592633|sp|Q49XY2|AROK_STAS1 RecName: Full=Shikimate kinase; Short=SK
 gi|72495041|dbj|BAE18362.1| putative shikimate kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 170

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            I LD  ++I  KR++N  +   +     FE K +    +    + +IA         V+
Sbjct: 100 VIWLDCDIEILYKRIKNDSNRPNANNKSLFELKSL-YSSRV-SRYNEIA------FIKVN 151

Query: 193 SAHSFQSVATNILNIV 208
           S+ S   +  +I+  +
Sbjct: 152 SSQSLSDLQNDIMEAI 167


>gi|15617021|ref|NP_240234.1| adenylylsulfate kinase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
 gi|11386736|sp|P57497|CYSC_BUCAI RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|25287561|pir||H84978 adenylyl-sulfate kinase (EC 2.7.1.25) [imported] - Buchnera sp.
           (strain APS)
 gi|10039086|dbj|BAB13120.1| adenylylsulfate kinase [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 206

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 36/145 (24%)

Query: 7   IS--FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   F G+ G+GK+T  + L+  L +   +                   LL       G 
Sbjct: 30  IVLWFTGLSGSGKSTIANFLEEILFKNGIN-----------------SYLLDGDNIRSGL 72

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            ++     A R +++     V++  L  G I+L    + S Y  Q E         + L+
Sbjct: 73  CSDLSFSLADRNENIRRIGEVVKMMLHAGLIILV--SVISPYRNQREMVRQMLGKKNFLE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
                       + +D P++I   R
Sbjct: 131 ------------VFIDTPIEICESR 143


>gi|317179020|dbj|BAJ56808.1| adenylate kinase [Helicobacter pylori F30]
          Length = 191

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+  +  LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTKRGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189


>gi|299138227|ref|ZP_07031406.1| Uridine kinase [Acidobacterium sp. MP5ACTX8]
 gi|298599473|gb|EFI55632.1| Uridine kinase [Acidobacterium sp. MP5ACTX8]
          Length = 239

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 72/218 (33%), Gaps = 46/218 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  G+GKTT    L   L+   + +    R+    P        L      +     E+ 
Sbjct: 45  GCSGSGKTTLARELASQLEATIFPLDLYYRDLSQIPLE------LRDKENFDDPDSLESE 98

Query: 70  VFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERD---SSQHLFLDSLQEI 123
           +F    ++H+       L +G  +   + D    +  A  G  D   S++ L ++ +  +
Sbjct: 99  LF----VEHLRR-----LADGHTIQRPVYDFSHHTRVA--GAFDLISSARFLIVEGILAL 147

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              E++P  D ++ ++ P +I L R   R                    E  R  F   A
Sbjct: 148 HYPELLPLYDFSLYVNAPNEICLNRRIYRDMRERGRTE-----------ESVRAQFEATA 196

Query: 182 RNQPDRCH---------IVDSAHSFQSVATNILNIVWE 210
           R   +R           IV+           +L  + +
Sbjct: 197 RPMAERYVLPSQIHANLIVEGTEDLDWSIEQVLRELHK 234


>gi|196001173|ref|XP_002110454.1| hypothetical protein TRIADDRAFT_22099 [Trichoplax adhaerens]
 gi|190586405|gb|EDV26458.1| hypothetical protein TRIADDRAFT_22099 [Trichoplax adhaerens]
          Length = 4324

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 24/114 (21%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
            G  G+GKTT   +LK  L +    V   T  P   P  +    +       E+      +
Sbjct: 2005 GPSGSGKTTLWRVLKAALAKTGQVVKQYTMNPKAMPRTQLLGQI--DIDTREWSDG--VL 2060

Query: 70   VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             ++A        V+R  +     ++CD                   +++SL  +
Sbjct: 2061 TYSA------RQVVREPIEIQSWIICD-------------GDIDPEWVESLNSV 2095


>gi|50308621|ref|XP_454313.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643448|emb|CAG99400.1| KLLA0E08053p [Kluyveromyces lactis]
          Length = 302

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 46/217 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T  + L +      L   +       RE  G+   E  +  +    +     
Sbjct: 119 GGPGAGKGTQCAKLVKDFGFVHLSAGDLLRAEQARE--GSQYGELIKKCIKDGEI----- 171

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                         V   +  AL++  I        S+Y    ++           Q I+
Sbjct: 172 --------------VPQEVTVALLKNAI-------TSNYNSSNKKFLVDGFPRKMDQAIT 210

Query: 125 VQE-VMP-DCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIF 177
            +E ++P   T+  D P  I L+R+  R   S R    ++  +++     E      + F
Sbjct: 211 FEEEIVPSTMTLFFDCPEKIMLERLLQRGKTSGRIDDNIESIQKRFKTFVETSVPVVEYF 270

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 + ++   V        V  ++   + + + K
Sbjct: 271 -----EKQNKVVKVSCNQPVDEVYQHVTEAIKDKISK 302


>gi|320354675|ref|YP_004196014.1| AAA ATPase [Desulfobulbus propionicus DSM 2032]
 gi|320123177|gb|ADW18723.1| AAA ATPase [Desulfobulbus propionicus DSM 2032]
          Length = 471

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G EG+GKT    L+   L    Y V V   P G+   E  R V L  G+D  GA
Sbjct: 47  KLI---GPEGSGKTLICRLIAERLSS-GYQVVVLDNPIGSFD-ELLRLVCLDLGMDPRGA 101

Query: 65  EAEAIVFAA 73
             +   F A
Sbjct: 102 HEQTHFFEA 110


>gi|257387285|ref|YP_003177058.1| signal recognition particle-docking protein FtsY [Halomicrobium
           mukohataei DSM 12286]
 gi|257169592|gb|ACV47351.1| signal recognition particle-docking protein FtsY [Halomicrobium
           mukohataei DSM 12286]
          Length = 367

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 18/156 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L   L+ +     +    G T  A A     L    D      
Sbjct: 174 IIFTGVNGVGKTTTIAKLSERLEGQGLSTVLA--NGDTYRAGANEQ--LQKHADNLDRTL 229

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +    +     + + +  A      ++L D            R  +    +  L++I  
Sbjct: 230 ISHEQGSDPAAVIYDAVEYAEANDTDVVLGD---------TAGRLHTSDDLMAQLEKID- 279

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160
           + + PD TI   +   +  +   NR     E+A +D
Sbjct: 280 RVIDPDMTIF--VDEAVAGQDAVNRAREFDEAAEID 313


>gi|148692981|gb|EDL24928.1| dynein cytoplasmic 2 heavy chain 1 [Mus musculus]
          Length = 3687

 Score = 43.5 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
             +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     
Sbjct: 1353 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 1405

Query: 61   EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    ++ ++  +AR      V+R        ++CD                   +++SL
Sbjct: 1406 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 1447

Query: 121  QEI 123
              +
Sbjct: 1448 NSV 1450


>gi|289434843|ref|YP_003464715.1| hypothetical protein lse_1478 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171087|emb|CBH27629.1| coaE [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 200

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 70/233 (30%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60
           G+ G+   GK+T   ++++    L   +       EPG    AE      + +LL+ G  
Sbjct: 6   GLTGSVATGKSTVSKMIQKAGIPLVDADIAAIKVVEPGTEGLAEIVAYFGKEILLADGSL 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A+ I     +   +  +  P + +               Y  E            
Sbjct: 66  NRPKLADIIFKNEEKRQKLNKITHPRVKD---------------YMLEERK--------- 101

Query: 121 QEISVQEVMPDCTIILDLP--------------------VDIGLKRVQNRYSLRESACLD 160
           +  ++        +  D+P                     +  LKR+  R +L + A LD
Sbjct: 102 RYFAMGG----KVVFFDIPLLFESHLESLVDQIVVVWVTPETELKRLMERNNLTKEAALD 157

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               + + I EK        A+       ++++  S +     +   +   V 
Sbjct: 158 RINSQ-MGIDEK--------AKKAD---FVINNNESLEKTEKQVSAFIDRFVN 198


>gi|241802126|ref|XP_002400795.1| thymidine kinase, putative [Ixodes scapularis]
 gi|215510860|gb|EEC20313.1| thymidine kinase, putative [Ixodes scapularis]
          Length = 172

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 24/119 (20%)

Query: 107 GERDSSQHLFLD-SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           G  D  +H  LD   Q I   E +  D  + L    ++ ++R+++R    E       ++
Sbjct: 54  GLMDPLEHSILDQWFQWIVQNERVALDLVVYLRTEPEVAMERIRHRKRPEE-------DQ 106

Query: 165 KDVMIHEKR----------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
             +    +           R  F       P R  ++D+      V   +   V ++++
Sbjct: 107 ISLAWLRQVHMLHDSWLLGRSQF-----PLPPRVLVIDANRDCIDVQHELTRRVPDVLK 160


>gi|20092902|ref|NP_618977.1| signal recognition particle receptor [Methanosarcina acetivorans
           C2A]
 gi|19918211|gb|AAM07457.1| signal recognition particle receptor [Methanosarcina acetivorans
           C2A]
          Length = 417

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 67/204 (32%), Gaps = 37/204 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT IS +   L +  Y V +    G T  A A     L    +  G + 
Sbjct: 224 IVFVGINGTGKTTSISKITNRLLKSGYSVVLAA--GDTFRAGAIDQ--LGIHANRLGVKM 279

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                 A     + + ++ A    KI  +L D            R  +    +  +++I 
Sbjct: 280 IKHQAGADPAAVIYDAVQYA-KAHKIDFVLSD---------TAGRMHTNMNLMAQMEKI- 328

Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQN-------------RYSLRESAC----LDYFERK 165
            +   PD  I +D  +  +  ++R                +            + Y   K
Sbjct: 329 CRVSTPDLIIFVDEAVAGNDAVERAAQFNEAVPIDGSILTKIDADAKGGAAISIAYITGK 388

Query: 166 DVMIHEKRRQIFLDIARNQPDRCH 189
            ++      Q + D+ +  P+   
Sbjct: 389 PILFFG-IGQGYEDLKKFDPEWFV 411


>gi|331654595|ref|ZP_08355595.1| hypothetical ATP-binding protein YghR [Escherichia coli M718]
 gi|331047977|gb|EGI20054.1| hypothetical ATP-binding protein YghR [Escherichia coli M718]
          Length = 252

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + ++  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIETAISR 193


>gi|297154416|gb|ADI04128.1| hypothetical protein SBI_01007 [Streptomyces bingchenggensis BCW-1]
          Length = 217

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 19/214 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHV---LLSCG 58
           F    G + AGK++ +S         ++ +  T E    P         R V   +L   
Sbjct: 11  FSVLLGPDYAGKSSVMSEFAS--SSPSWRLISTDERFLQPAHALIGRLRRDVAVDVLPSL 68

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             ++  E  A +   A +   + +         ++  D +     A         +    
Sbjct: 69  GTDYSPEFTASLLQTAVVHLRDRIEASDPSSPTLV--DSYYYKILAKCRLAGLRDNPMYT 126

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFERKDVMIHE-KRRQI 176
             +        P   + LD+      +R  N   + R     D  + K    ++ K R++
Sbjct: 127 WWRSF----PQPRRVVFLDVSTATAWRRSGNGAATNRLEYYGDRPDPKGFAAYQTKLRRL 182

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            LD   + P    ++ +       A  I  ++ +
Sbjct: 183 MLDEISHLP--VTVIRAQGDIAQTAQAIRKVLSD 214


>gi|288918003|ref|ZP_06412362.1| adenylate kinase [Frankia sp. EUN1f]
 gi|288350658|gb|EFC84876.1| adenylate kinase [Frankia sp. EUN1f]
          Length = 248

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 68/237 (28%), Gaps = 73/237 (30%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDEFGA 64
              G++G+GK T   L+   L   +  V           T      R ++ S  +     
Sbjct: 5   VIMGVQGSGKGTQAKLMADELDLVHISVGDVFRWNVQHHTKIGAQVRRIVASGHLVGD-- 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                       D VE+V+R  L E       + D F  +  A Q E           L+
Sbjct: 63  ------------DLVESVVRTRLTEHDWNYGFIIDGFPRN--ARQAEF---------FLE 99

Query: 122 EISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFERKDV--------- 167
              +        I LDLP +     +  +R+ +R  L  +      + +D          
Sbjct: 100 SYDIDG-----VIYLDLPDEEVVRRVLARRLCSRCGLDYNLIASRPQVEDTCDVCGGALV 154

Query: 168 ---------------MIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
                            H K R    IF        +   +VD+  S   V   I  
Sbjct: 155 TRSDDNPEALAVRLSEYHAKTRPVMDIFQR-----KEHVAVVDARRSVLEVQAEIRE 206


>gi|229133608|ref|ZP_04262435.1| uridine kinase [Bacillus cereus BDRD-ST196]
 gi|228650008|gb|EEL06016.1| uridine kinase [Bacillus cereus BDRD-ST196]
          Length = 189

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 17/88 (19%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183
           D TI +D P+DI + R   R         D+ E     IH          R+ +LD    
Sbjct: 104 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLDAIHT 154

Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+   ++D + S   +   I+  +  
Sbjct: 155 VKPNSDIVLDGSLSISEIIDQIIEELNR 182


>gi|301773304|ref|XP_002922072.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like, partial
            [Ailuropoda melanoleuca]
          Length = 4024

 Score = 43.5 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  GAGK+T   +L+  L R    V   ++    P A   R +L   G  +     
Sbjct: 1974 VVIVGPSGAGKSTLWRMLRAALCRIGRVV---KQYTMNPKAMPRRQLL---GHIDMDTRE 2027

Query: 67   EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2028 WSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2068


>gi|322708714|gb|EFZ00291.1| glucokinase [Metarhizium anisopliae ARSEF 23]
          Length = 225

 Score = 43.5 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 61/202 (30%), Gaps = 35/202 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKTT    L   L     +  +           +   +      D +    E   
Sbjct: 55  GPAGCGKTTVAEHLANALDIPYIEGDLYHPQSNIDKMSSGIPL---TDADRWDWLTELRN 111

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            A +R+            EG ++ C        A + +      +     + + +     
Sbjct: 112 QANSRI--------HDGAEGVVVAC-------SALKLKYRDVIRVAAYWDRSLIIHF--- 153

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
              I L  P ++ LKRV  R      A      +    I E+ R+       ++ D    
Sbjct: 154 ---IFLHAPAELLLKRVTARKGHYMGAN---MVKSQFDILERPRE-------DEID-VIT 199

Query: 191 VDSAHSFQSVATNILNIVWELV 212
           VD++     V  + L  V  ++
Sbjct: 200 VDASRDVDEVKEDALEKVKAML 221


>gi|9631211|ref|NP_047992.1| thymidine kinase [Ateline herpesvirus 3]
 gi|4019247|gb|AAC95545.1| thymidine kinase [Ateline herpesvirus 3]
          Length = 527

 Score = 43.5 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 57/174 (32%), Gaps = 27/174 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58
            FI  EG  G GKTT +  ++  L     +V    EP          + +    + L   
Sbjct: 210 FFIFLEGSIGVGKTTLLKSMRGILP--GKNVLTFHEPMAFWKNVFSNSLDEVYKLTLPAK 267

Query: 59  VDEFGAEAEAIV----FAAARL------DHVENVIRPALMEGKILLCDRFLDS------S 102
           V      ++ +     FAA  L      D +    R  L     ++ DR   S       
Sbjct: 268 VGSMTNSSKLLACQLKFAAPLLALKTSTDRLSISNRSNLSSNMWVMFDRHPLSATVVFPY 327

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
             YQ    S  HL        +      D  I+L+L     L+RV+ R    E 
Sbjct: 328 MHYQNGFLSFSHLVHLWGSFRASHG---DNIILLNLNSQENLERVKRRNRKEEK 378


>gi|302538641|ref|ZP_07290983.1| predicted protein [Streptomyces sp. C]
 gi|302447536|gb|EFL19352.1| predicted protein [Streptomyces sp. C]
          Length = 243

 Score = 43.5 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 16/192 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL+++  G    GK+T +  L+R L             G +  A   R + L       
Sbjct: 20  RGLYVAVSGNTSGGKSTLVEQLRRELVADGVPAI-----GVSERAFHHRFLPLMFSNSRD 74

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A    + F   R      V+   L  G+ ++ +R     + +  E   S ++  D +  
Sbjct: 75  FAFPIQLSFMLER----HMVLLRNLALGRTVVMERSHLDDFLFVREHAESGNIAADQVAA 130

Query: 123 -------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                  +  +   PD  ++++ P ++ LKR+       E       E       E+   
Sbjct: 131 YRGLAHVLHARIPDPDVLVLMNPPAEVSLKRLAAAEEAGERPREFPDEAVKRGWVERWHA 190

Query: 176 IFLDIARNQPDR 187
           ++ D+  +  +R
Sbjct: 191 MYEDLHAHFRER 202


>gi|239809500|gb|ACS26222.1| unknown [uncultured bacterium]
          Length = 210

 Score = 43.5 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 32/148 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I F G+ G+GK+T    L+  L  + Y  +                  L      
Sbjct: 28  QKGATIWFTGLSGSGKSTVACALEEALYERGYLAYR-----------------LDGDNVR 70

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G        A  R +++     V +  +  G I+L      S Y        +    + 
Sbjct: 71  LGINKNLGFSAEDRAENIRRIGEVAKLFVDTGVIVLS--SFVSPY-------RADRERVR 121

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            L E +  +      + +D+P+ +  +R
Sbjct: 122 ELHEAAGMDF---IEVYVDVPLAVAEER 146


>gi|195447742|ref|XP_002071350.1| GK25181 [Drosophila willistoni]
 gi|194167435|gb|EDW82336.1| GK25181 [Drosophila willistoni]
          Length = 293

 Score = 43.5 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 11/90 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          +   G+  +GK+T    L  +L  +   VH+  E    P A   ++   +    E    +
Sbjct: 4  VVITGLPASGKSTRARQLADYLTERGKKVHLVTENEAVPKAGYEKNAYFADSQKEKLGRS 63

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96
          + +   A+R           L + ++++ D
Sbjct: 64 D-LKSEASR----------QLNKEEVVILD 82


>gi|301055145|ref|YP_003793356.1| hypothetical protein BACI_c36050 [Bacillus anthracis CI]
 gi|300377314|gb|ADK06218.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 192

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 31/167 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F   +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 54  ----FIVNQKMFIEAKIKEFQNAKGSVVIFDRGPEDVEFYTIFYPTTIGKEWDIETELKD 109

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L  L+E        D    LD+       R  N  +   S   + F
Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151


>gi|302795085|ref|XP_002979306.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii]
 gi|300153074|gb|EFJ19714.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii]
          Length = 402

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%)

Query: 49  AARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
             R +L      +    A  I+F+A R D     +   LM G  L+ DRF  S  A+   
Sbjct: 10  RLRCLLFLGRGADLDDRAVHILFSANRWDL---KMEKKLMAGTTLVVDRFSYSGVAFSAA 66

Query: 109 RDSSQHLFLDSLQ 121
           +     L L+  +
Sbjct: 67  KG----LDLEWCK 75


>gi|309807858|ref|ZP_07701790.1| deoxyadenosine kinase [Lactobacillus iners LactinV 01V1-a]
 gi|308168960|gb|EFO71046.1| deoxyadenosine kinase [Lactobacillus iners LactinV 01V1-a]
          Length = 214

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++   +L   L    +         G P        +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTKILADEL--HGHA--FYENVDGNP--------ILPLFYKDMSKYT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     ++H    I  A      ++ D   + DS +       G  DS++      L
Sbjct: 52  --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
               +++V       PD  I +   +D  LK ++ R  + E    D
Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154


>gi|163785526|ref|ZP_02180106.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879205|gb|EDP73129.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 207

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 79/225 (35%), Gaps = 48/225 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T    L      K +    T         +  R  + +    E G +A+ 
Sbjct: 7   FLGPPGAGKGTQAQRLVE---EKGFVQIST--------GDILREAVKNG--TELGKKAKE 53

Query: 69  IVFAA----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A       +       +   +EGK ++ D F          R   Q   LD +  ++
Sbjct: 54  YMDAGKLVPDDIIIGIIKDKLKELEGKDIILDGF---------PRTIPQAEALDKM--LA 102

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL------------DYFERKDV--MIH 170
                 D  I+ D+P +  +KR+  R    ++  +            +  +R D    + 
Sbjct: 103 EVGRQLDGVILFDVPDEEVIKRLSGRRVDPKTGKVYHIIYNPPPPDVEVIQRDDDKEEVI 162

Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +KR +++            + ++  ++D+  S   V   +L+++ 
Sbjct: 163 KKRLEVYHSQTAPLIEYYKKQNKLLVIDATKSPDEVYKELLSVLK 207


>gi|319789259|ref|YP_004150892.1| adenylate kinase [Thermovibrio ammonificans HB-1]
 gi|317113761|gb|ADU96251.1| adenylate kinase [Thermovibrio ammonificans HB-1]
          Length = 187

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 46/214 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + F G  GAGK T    +     +       T         +  R  +         A+ 
Sbjct: 4   VVFLGPPGAGKGTQAQRIAA---KYGVPHIST--------GDILRAAVKEGTELGKLAKT 52

Query: 67  EAIVFAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                   R + V +     +IR  L E   +    F+   +     +  +    L+ L 
Sbjct: 53  -----YMDRGELVPDDVIIGIIRERLSEPD-VKEKGFILDGFPRTIAQAKALDQMLEELN 106

Query: 122 EISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179
                  MP D  I L++  +  +KR+  R    ++  +            KR +++ + 
Sbjct: 107 -------MPLDRVIYLNVDDEEIVKRLLARGREDDTEEVIR----------KRLKVYREQ 149

Query: 180 ---IARNQPDRCHIVD--SAHSFQSVATNILNIV 208
              +     ++C +V+         +   I   +
Sbjct: 150 TAPLIDYYSEKCLLVEIYGVGDIDEITAKIEEAL 183


>gi|255076513|ref|XP_002501931.1| adenylate kinase [Micromonas sp. RCC299]
 gi|226517195|gb|ACO63189.1| adenylate kinase [Micromonas sp. RCC299]
          Length = 248

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 56/232 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   +GK T   L+     +   +           A +  R  +      + G  A
Sbjct: 46  IVIAGAPASGKGTQCELIVD---KYGLEHI--------SAGDLLRAAV--AAGTDLGVRA 92

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-------S 119
           +  +    R D V + +      G ++          A   ++  S    LD        
Sbjct: 93  KEFM---DRGDLVPDEVVV----GMVV---------EALDTDKAKSAGWLLDGYPRSASQ 136

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------- 159
              I+ + ++PD  I+LD+P DI ++RV  R    E+  +                    
Sbjct: 137 ADAITKEGIIPDSVILLDVPDDILVERVVGRRMDPETGKIYHLKFNPPPADVAARCTQRS 196

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D  E K +   +        +      + + +D   S   V  +I  ++ E+
Sbjct: 197 DDTEEKAMNRLKVHHSNVEAVVGKYEGKINEIDGNRSKADVFADICGVIDEM 248


>gi|156937985|ref|YP_001435781.1| adenylate kinase [Ignicoccus hospitalis KIN4/I]
 gi|156566969|gb|ABU82374.1| adenylate kinase-like protein [Ignicoccus hospitalis KIN4/I]
          Length = 202

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 56/176 (31%), Gaps = 25/176 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT  S     L+ K Y V V             R  +           ++   
Sbjct: 12  GVPGVGKTTVTSKAVEMLKEKGYKVKVANFGDYMLKVAKERGWVQHRDEMRKLNLSQQRE 71

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQEISVQE 127
             A     +    +  L +  +L+    +D+  A     G         +++L       
Sbjct: 72  LQALAAKAIIEEAKAELGDEGVLI----VDTHAAINTPTGVWPGLPKHVIENLN------ 121

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             P    +++   +  ++R +       S   D      V   ++    F+++ARN
Sbjct: 122 --PAIIFVIEASPEEIVERQRGDKGRVRSDYSD------VDFLKR----FMELARN 165


>gi|85057935|ref|YP_456851.1| guanylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
 gi|119371172|sp|Q2NIH1|KGUA_AYWBP RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|84790040|gb|ABC65772.1| guanylate kinase [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 211

 Score = 43.1 bits (101), Expect = 0.025,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 66/218 (30%), Gaps = 50/218 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLS 56
             GL I   G  G GK T    L    +  N++        TR+P          H  L+
Sbjct: 5   KKGLLIILSGPSGVGKATVRKAL---FEMTNHNFVYSVSATTRKPRPGEQDGKDYH-FLT 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               E G E    +  A  +DH     +  I+  L +GK +                   
Sbjct: 61  KEEFEKGIENNCFLEWAKFIDHYYGTPKKQIQDFLKQGKEVFL---------------EI 105

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           +      L++    + MP+   I  +P        R++ R + +E   +    + +    
Sbjct: 106 EVEGATHLRK----KRMPNTVFIFLVPPKKKDLYDRLKKRGTEQEINIVQRIAKANNEF- 160

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                    +A        +V+       VA     I+
Sbjct: 161 --------RLAHKYD--YIVVN-----DEVANAADRII 183


>gi|240104007|ref|YP_002960316.1| signal recognition particle protein Srp54 [Thermococcus
           gammatolerans EJ3]
 gi|259511389|sp|C5A233|SRP54_THEGJ RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|239911561|gb|ACS34452.1| Signal recognition particle, subunit SRP54 (srp54) [Thermococcus
           gammatolerans EJ3]
          Length = 448

 Score = 43.1 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 17/127 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT I+ L R LQ++ Y V +       P A    + ++    ++ FG   E  
Sbjct: 107 GIQGSGKTTTIAKLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPGE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 +      +     +G  +++ D            R   +   ++ +++I  + +
Sbjct: 165 ---KDAIKLAREGVEYFKDKGVDVIIVD---------TAGRHKEESGLIEEMKQI-SEAI 211

Query: 129 MPDCTII 135
            P   I+
Sbjct: 212 KPHEVIL 218


>gi|220941822|emb|CAX15688.1| dynein cytoplasmic 2 heavy chain 1 [Mus musculus]
          Length = 4313

 Score = 43.1 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
             +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     
Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024

Query: 61   EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    ++ ++  +AR      V+R        ++CD                   +++SL
Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066

Query: 121  QEI 123
              +
Sbjct: 2067 NSV 2069


>gi|72534792|ref|NP_084127.2| cytoplasmic dynein 2 heavy chain 1 [Mus musculus]
 gi|123781373|sp|Q45VK7|DYHC2_MOUSE RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName:
            Full=Cytoplasmic dynein 2 heavy chain; AltName:
            Full=Dynein cytoplasmic heavy chain 2; AltName:
            Full=Dynein heavy chain 11; Short=mDHC11; AltName:
            Full=Dynein heavy chain isotype 1B
 gi|71796861|gb|AAZ41367.1| dynein cytoplasmic heavy chain 2 [Mus musculus]
 gi|220941821|emb|CAX15687.1| dynein cytoplasmic 2 heavy chain 1 [Mus musculus]
          Length = 4306

 Score = 43.1 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
             +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     
Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024

Query: 61   EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    ++ ++  +AR      V+R        ++CD                   +++SL
Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066

Query: 121  QEI 123
              +
Sbjct: 2067 NSV 2069


>gi|152979404|ref|YP_001345033.1| putrescine/spermidine ABC transporter ATPase protein
          [Actinobacillus succinogenes 130Z]
 gi|150841127|gb|ABR75098.1| spermidine/putrescine ABC transporter ATPase subunit
          [Actinobacillus succinogenes 130Z]
          Length = 373

 Score = 43.1 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
          +N+G FI+  G  G GKTT + L+  F +     + +  E      AE 
Sbjct: 33 INNGEFITILGPSGCGKTTVLRLIAGFEEANGGQIILDGEDVTNIPAEQ 81


>gi|325297662|ref|YP_004257579.1| KAP P-loop domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324317215|gb|ADY35106.1| KAP P-loop domain protein [Bacteroides salanitronis DSM 18170]
          Length = 864

 Score = 43.1 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  EG+ GAGK+  + L+++ LQ+   D             +  R  LL    D+   
Sbjct: 48  RIIGIEGVWGAGKSNVVKLIEKHLQKDGSDYFFFEYDAWGNQEDLQRRSLLEQLTDKLVN 107

Query: 65  EAEAI 69
           E   I
Sbjct: 108 EEILI 112


>gi|260890001|ref|ZP_05901264.1| dTMP kinase [Leptotrichia hofstadii F0254]
 gi|260860607|gb|EEX75107.1| dTMP kinase [Leptotrichia hofstadii F0254]
          Length = 111

 Score = 43.1 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 43/110 (39%), Gaps = 10/110 (9%)

Query: 111 SSQHLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
           S + ++L+ L ++    +    PD    LD+P     + ++NR +            KD 
Sbjct: 4   SEREIYLNWLIDLEWRKIAIPEPDVVFFLDIPFVFSQQLMKNRENKITGEKEKDIHEKDK 63

Query: 168 MIHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELV 212
              +   ++  +++     + +++     D   + + +   I+ I  + +
Sbjct: 64  NYLKNAYEVAKELSEKY--KWNVISCVKDDKLRTIEDINDEIMKITLKKI 111


>gi|145528007|ref|XP_001449803.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417392|emb|CAK82406.1| unnamed protein product [Paramecium tetraurelia]
          Length = 510

 Score = 43.1 bits (101), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 4/124 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVDEFGAE 65
           I   G   AGKTT ++ L   L+ + + V++  E   T         +       +   +
Sbjct: 89  ICITGGPCAGKTTGLNYLAEKLKERGFSVYIVPEAATTLFMGGGMLDLDNYSAEGKMTFQ 148

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              ++    +L+H  NV+       K  ++LCDR L    AY  + +  + +   +L+E+
Sbjct: 149 MN-LLNLQMKLEHCFNVLAMLCPPNKTPVMLCDRGLMDGKAYMDQNEWYEMIGKYNLEEV 207

Query: 124 SVQE 127
            +++
Sbjct: 208 KLRD 211


>gi|326330293|ref|ZP_08196603.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae
           bacterium Broad-1]
 gi|325951830|gb|EGD43860.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae
           bacterium Broad-1]
          Length = 198

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 41/218 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-----ARHVLLSCGVDEFGAE 65
           G  GAGK T  +++             T +      AE      A    +  G       
Sbjct: 7   GPPGAGKGTQAAVIAERFA---VPAISTGDIFRANVAEQTALGVAAQAYMDAGEYVPDEL 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A    A R           L  G     D FL   Y     R   Q   LD +  ++ 
Sbjct: 64  TNA--MVADR-----------LASGDC--ADGFLLDGY----PRTPQQVAELDEILALAD 104

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181
             +  D  ++L+   D  + R+  R    E    D  + + V+   +R +++      +A
Sbjct: 105 VGL--DAVVLLEADPDELVGRLLARSQ--EQGRAD--DTESVI--RRRLEVYAAETGPLA 156

Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +  +R     VD       V   IL ++  +  +R +
Sbjct: 157 DHYAERDLLARVDGLGPVHEVTERILTVLTSVAAQRTA 194


>gi|312872699|ref|ZP_07732764.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|325912308|ref|ZP_08174705.1| deoxyadenosine kinase [Lactobacillus iners UPII 143-D]
 gi|311091741|gb|EFQ50120.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2062A-h1]
 gi|325475967|gb|EGC79136.1| deoxyadenosine kinase [Lactobacillus iners UPII 143-D]
          Length = 214

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++   +L   L  +           G P        +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTKILADELHGQ----AFYENVDGNP--------ILPLFYKDMSKYT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     ++H    I  A      ++ D   + DS +       G  DS++      L
Sbjct: 52  --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
               +++V       PD  I +   +D  LK ++ R  + E    D
Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154


>gi|296393762|ref|YP_003658646.1| hypothetical protein Srot_1350 [Segniliparus rotundus DSM 44985]
 gi|296180909|gb|ADG97815.1| hypothetical protein Srot_1350 [Segniliparus rotundus DSM 44985]
          Length = 281

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           Q  +PD  + LD P ++  +R   R    +    +  ER  +      R+ +L +     
Sbjct: 194 QTTLPDDVLWLDAPPELAARRCAARSESGQIEAHETPER--LAF---LRERYLAVRDLFE 248

Query: 186 D-----RCHIVDSA 194
                 R H+++++
Sbjct: 249 QRIPGTRFHVIETS 262


>gi|224009393|ref|XP_002293655.1| ATP sulfurylase [Thalassiosira pseudonana CCMP1335]
 gi|220971055|gb|EED89391.1| ATP sulfurylase [Thalassiosira pseudonana CCMP1335]
          Length = 968

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 32/156 (20%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  GAGKTT  + L+  L +     V+                  L       G   +  
Sbjct: 157 GCSGAGKTTIATALEDRLIKAYGKHVYR-----------------LDGDNLRTGINRDLT 199

Query: 70  VFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
              A R + V          G+I  L  D  + +         + +       ++ ++  
Sbjct: 200 FTEADRAESVRRT-------GEIATLFADSGVITLVGLISPYRADRDAVRKRHEDQNIPF 252

Query: 128 VMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYF 162
                 I LD+PV+   KR  + +Y+  ES  L +F
Sbjct: 253 YE----IFLDVPVEELKKRDPKGQYARVESGQLKHF 284


>gi|170076971|ref|YP_001733609.1| bifunctional pantoate ligase/cytidylate kinase [Synechococcus sp.
           PCC 7002]
 gi|169884640|gb|ACA98353.1| pantothenate synthetase/cytidylate kinase [Synechococcus sp. PCC
           7002]
          Length = 508

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 19/218 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAAEAARHVLLSCG 58
           I+ +G  GAGK+T    +   L+    D         ++  E    P  E A   L+S  
Sbjct: 286 IAIDGPAGAGKSTVTRQVAEQLKLLFLDTGAMYRAIAYLVLENNINPQDEVAVAELVSTA 345

Query: 59  VDEFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQGERDSSQH 114
                      E I   A  LD  + +  PA+ +   ++  +  +  +   Q +R     
Sbjct: 346 TITLVPPKAPTEPITVLANNLDVTQAIRTPAVTKQVSVIAAQAAVRQALVKQQQRLGENG 405

Query: 115 LFLDSLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             +   ++I    V PD    I L        +R     + +    +D   + +  I E+
Sbjct: 406 GLVAEGRDIGTH-VFPDAELKIFLTATPAERARRRAKDLTAQGETNID-LGQLEAEITER 463

Query: 173 RR-QIFLDIA--RNQPDRCHIVDSAHSFQSVATNILNI 207
            R      IA     PD   ++    S ++V   I+++
Sbjct: 464 DRLDSTRAIAPLTKAPDAVELITDDLSIEAVVAKIIHL 501


>gi|163795892|ref|ZP_02189856.1| hypothetical protein BAL199_20800 [alpha proteobacterium BAL199]
 gi|159178925|gb|EDP63461.1| hypothetical protein BAL199_20800 [alpha proteobacterium BAL199]
          Length = 527

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 57/205 (27%), Gaps = 36/205 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++  GI G GKTT    +   L      V +         ++  R   L     E   +A
Sbjct: 355 VAIGGISGTGKTTLARAVAHLLGPPPGAVVL--------RSDVVRKRQLGVAETERLPKA 406

Query: 67  --EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  V +    + +    R     G  ++ D        Y    D              
Sbjct: 407 AYEPAVSSKVFAE-IHRRARRLAEFGSAVIAD------AVYGRCEDRRAIARAAGRAGTR 459

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                    + L+LP +    RV  R      A +D   ++   I               
Sbjct: 460 FLG------VWLELPKEEAQSRVAKRRGDASDATVDVVAKQATSI-------------VS 500

Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209
           P    ++D+      +A  ++  V 
Sbjct: 501 PRNWLVLDATRPVAELAAEVVEAVR 525


>gi|15807280|ref|NP_296010.1| guanylate kinase [Deinococcus radiodurans R1]
 gi|6460098|gb|AAF11836.1|AE002061_3 guanylate kinase [Deinococcus radiodurans R1]
          Length = 272

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 77/230 (33%), Gaps = 52/230 (22%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSC 57
            GL I   G  G GK T      R+L     DV       TREP          +V +S 
Sbjct: 51  RGLLIVVTGASGVGKGTLRE---RWL--AGQDVFYSTSWTTREPRPGEVNGR-DYVFVSP 104

Query: 58  GVDEFGAEAEAIVFAAARL-DHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                 A+    +  A  + +H    I P   AL  G+ ++ +  ++   A Q +    +
Sbjct: 105 AEFLAKAQQNGFLEHAQFVGNHYGTPIEPIEAALERGQDVVLE--IEVEGAMQVKDRMGE 162

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
                                I  +P    L  ++ R + R +   +  E++      + 
Sbjct: 163 QAI---------------LVFI--MPP--SLTELRRRLTGRATETPERIEKR----LTRA 199

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           R    +I      R  IV+          N+   V EL+  + +  +++K
Sbjct: 200 RD---EIQAAHDFRYVIVN---------DNLDRAVSELLAVQQAERAAQK 237


>gi|296224544|ref|XP_002758096.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Callithrix
           jacchus]
          Length = 409

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 37/185 (20%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  ++ EG++  GKTT    +   L+     V +   P      +  R +      
Sbjct: 248 QKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF----- 295

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----- 114
           D+  A      ++         + + +      ++ DR+  S+  Y    + S       
Sbjct: 296 DDEPAIIRRAFYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLP 353

Query: 115 -------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                   + + L +  +  ++        +  +  L+R+Q R   +     +  E   V
Sbjct: 354 PAHHPVYQWPEDLLKPDLVLLL-------TVSPEERLQRLQGRGMEKTREEAE-LEANSV 405

Query: 168 MIHEK 172
              +K
Sbjct: 406 -FRQK 409


>gi|134038647|gb|ABO48401.1| thymidine kinase [Wood mouse herpesvirus]
          Length = 647

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 71/239 (29%), Gaps = 60/239 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-------EAARHVLLSCGVDE 61
           F+G  G GKTT +     FL    +++ V  EP     +       +    V+ +    +
Sbjct: 334 FDGGIGVGKTTALEAAAEFL----HNILVIPEPIPYWTSTFDKNVCQQIYDVVRTKEKGK 389

Query: 62  FGA-------EAEAIVFAAARLDHVENVIRPALMEGK---ILLCDRFLDSSYA-----YQ 106
             +        A A  F A +       +   + +G     ++ DR + S        + 
Sbjct: 390 KHSKKVLQCQMAFAQPFFATQHLLRRTCLGTKVSDGTCNNHVVIDRHMLSPTVLFPCLFF 449

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                     +  L   S Q    D  I+  L   + + R++ R    E           
Sbjct: 450 RLGVLKFGDLISLLSMFSAQCF--DNIILFKLNPRVAVTRIKERGRNPEGV--------- 498

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAH---------SFQSVATNILNI--VWELVQK 214
                     +L +         +VD+             + +   IL+   V  + QK
Sbjct: 499 ------INHGYLKLLNE------VVDAVFCAWELLAIVPPEVIVEAILSQTPVKRIFQK 545


>gi|256024430|ref|ZP_05438295.1| hypothetical protein E4_13729 [Escherichia sp. 4_1_40B]
          Length = 252

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|242080121|ref|XP_002444829.1| hypothetical protein SORBIDRAFT_07g028830 [Sorghum bicolor]
 gi|241941179|gb|EES14324.1| hypothetical protein SORBIDRAFT_07g028830 [Sorghum bicolor]
          Length = 212

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 64/216 (29%), Gaps = 63/216 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        +            A +  R  + S   +          
Sbjct: 32  GGPGSGKGTQCTNIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71

Query: 71  FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114
                      +I   + EGKI+                  D+FL   +     R+    
Sbjct: 72  ----------TMIDNMIKEGKIVPSEVTIKLLKEAMIKSENDKFLIDGF----PRNEENR 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
              +++ +IS     P   +  D   +   +R+  R   R    ++   ++  +  E   
Sbjct: 118 AAFENVTKIS-----PAFVLFFDCAEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSL 172

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
              + +     +  D+   +D+A     V  ++  I
Sbjct: 173 PVIEYY-----SSKDKVKKIDAAKPIPEVFEDVKAI 203


>gi|300172676|ref|YP_003771841.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887054|emb|CBL91022.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811]
          Length = 214

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 80/232 (34%), Gaps = 35/232 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+   +L   L  K             P        L      ++G   
Sbjct: 2   IVLSGTIGAGKTSLTEMLANHLDSK----AFYESVDDNPILP-----LFYENPKKYGFLL 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----------SYAYQGERDSSQHL 115
           +               I+ A   GK  + DR +             + A Q E D  + L
Sbjct: 53  QIYFLNKRLAQ-----IKVAQTTGKNNIVDRSIYEDALLFQLTADLNRATQTEVDIYKSL 107

Query: 116 FLDSLQEIS-VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHE 171
             + + +I+ V ++  PD  I + +  +  L+R++ R    E   A  D +E    +   
Sbjct: 108 VDNMMADITGVDDIKNPDLLIHVRVSFETMLERIEKRGRSFEQIAANPDLYEYYKEL--N 165

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLSSK 222
           KR   + +     P     +D    F  V  +     V +++  ++S + +K
Sbjct: 166 KRYDAWFESYDRSPK--VQIDGDR-FDFVMNDEARYKVLDMIDTKLSEVDTK 214


>gi|168016757|ref|XP_001760915.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687924|gb|EDQ74304.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 185

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 69/212 (32%), Gaps = 43/212 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  G+GK T  + +      ++    D+    +  G       + ++    +        
Sbjct: 7   GGPGSGKGTQCAKIVEHFGFEHLSAGDLLRVEQNSGNETGNMIKGMIKEGKLVP------ 60

Query: 68  AIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                    +    +I  A+ +    K L+ D F          R+       D +    
Sbjct: 61  --------SEMTVKLILKAISKSSNNKFLI-DGF---------PRNDENREVWDRVA--- 99

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181
              + P+  + +    +   KRV +R   R+   L+   ++  + +E      + +  IA
Sbjct: 100 --GLSPEFILFIIGSEEEMQKRVLSRNEGRDDDNLETIHKRFKLFNEHTLPVVKHYESIA 157

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                  H ++   S + V + I  +   +VQ
Sbjct: 158 T-----VHKINGMQSIEDVFSEIRPLFDPIVQ 184


>gi|73663467|ref|YP_302248.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495982|dbj|BAE19303.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 220

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 52/190 (27%), Gaps = 35/190 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L              R    T       +  L    ++F   +
Sbjct: 12  ITIAGTVGVGKSTLTKALAE------------RFNFRTSFENVDHNPYLDKFYNDFERWS 59

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117
             +   F A R        +     G   + DR +      +A     QG          
Sbjct: 60  FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHQEQGTMSPEDFETY 115

Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             L   + +      PD  I L+   D  + R+Q R    E          D    +K  
Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECDYDDVINRIQQRGRQMEIET-------DTAYWQKLY 168

Query: 175 QIFLDIARNQ 184
           Q + D     
Sbjct: 169 QRYEDWISEF 178


>gi|302532235|ref|ZP_07284577.1| deoxynucleoside kinase [Streptomyces sp. C]
 gi|302441130|gb|EFL12946.1| deoxynucleoside kinase [Streptomyces sp. C]
          Length = 220

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 26/160 (16%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKT+   L+ + L     +V         P       +  +   +E  A+    +   
Sbjct: 11  GIGKTSVAELIAKEL---GSEVFYES-VEDNPILP----LFYTASPEEIQAKRYPFLLQL 62

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM---- 129
             L      I+ A  +G  +L DR +   + +           + SL+    + ++    
Sbjct: 63  YFLQTRFAAIKAAYKQGDNVL-DRSIYEDWYFAKVNHDLGR--ISSLEMRVYEGLLDEMM 119

Query: 130 -----------PDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                      PD  + L    +  L R+  R    E   
Sbjct: 120 REIDGLPYRKAPDLMVYLKADFETVLHRIGLRGRDFEQDE 159


>gi|325982449|ref|YP_004294851.1| sulfate adenylyltransferase, large subunit [Nitrosomonas sp. AL212]
 gi|325531968|gb|ADZ26689.1| sulfate adenylyltransferase, large subunit [Nitrosomonas sp. AL212]
          Length = 634

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 42/166 (25%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  F G+ G+GK+T  +L+++ L       +                 LL       G 
Sbjct: 462 FILWFTGLSGSGKSTIANLVEKKLYSLGKHTY-----------------LLDGDNVRHGL 504

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +     A R++++     V +  +  G+I+L      S  +            ++  +
Sbjct: 505 NKDLGFTDADRVENIRRIAEVAKLMVDAGQIVLV-----SFISPFHSERRMARELVEQGE 559

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
                       + +D P+ +  +R          R  L+    +D
Sbjct: 560 FFE---------VFIDTPIHVAEERDPKGLYKKMRRGELKNFTGID 596


>gi|226480692|emb|CAX73443.1| NADH:ubiquinone reductase 42kD subunit precurs [Schistosoma
           japonicum]
          Length = 418

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 27/181 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK------------NYDV-----HVTREPGGTPAAEA 49
           I  EG   +GK+   + L   L               N +V       T  P     A+ 
Sbjct: 70  IVVEGNIASGKSNVAAKLAELLDMAYFPDPTEDDIYINRNVEPNFDLRTHNPLLPYDAKY 129

Query: 50  ARHVLLSCGVDEFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
               +     D         +   F   R  +    +      G+ ++ DR   S +A+ 
Sbjct: 130 YTCEMFWNESDFINKGKGLYLQYHFYLRRYWNYLRALCHLFNTGQGVIIDRSPFSEFAFA 189

Query: 107 GERDS------SQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                         L+      +++  +  P   I +  P++   +R++ R    E    
Sbjct: 190 DAMHKCNYLSQRGLLWFKQNHSMTITNIWKPHLLIYIKAPIEKIRERIKKRNIPWEVNAR 249

Query: 160 D 160
           +
Sbjct: 250 N 250


>gi|238927504|ref|ZP_04659264.1| guanylate kinase [Selenomonas flueggei ATCC 43531]
 gi|238884786|gb|EEQ48424.1| guanylate kinase [Selenomonas flueggei ATCC 43531]
          Length = 197

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 68/224 (30%), Gaps = 38/224 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I   G  G GK T    L    +   + V  T        +   R         
Sbjct: 1   MKKGLLIVVSGASGTGKGTVCKELLARERGVAFSVSAT--------SRTPREGEQDGREY 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    E     A            A +E   +  + +  +  A    R S+    L  +
Sbjct: 53  YFRTRTEFETMIA----------EGAFLEYADVYGN-YYGTPLAPIEARRSAGEDILLEI 101

Query: 121 Q---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                ++V E  PD T I  LP   +   +R+  R +  + +           I   RR 
Sbjct: 102 DTQGALNVMERCPDGTFIFLLPPSLEELRRRITGRGTESKESLARRLAAARDEIRLGRRY 161

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV-WELVQKRVSP 218
            +  +               + ++ A  I  I+  E ++  ++P
Sbjct: 162 RYAVL-------------NDTVENAAAQIQTILAAERLRADMNP 192


>gi|157414143|ref|YP_001485009.1| adenylate kinase [Prochlorococcus marinus str. MIT 9215]
 gi|254526294|ref|ZP_05138346.1| adenylate kinase (ATP-AMP transphosphorylase) [Prochlorococcus
           marinus str. MIT 9202]
 gi|166980347|sp|A8G742|KAD_PROM2 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|157388718|gb|ABV51423.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9215]
 gi|221537718|gb|EEE40171.1| adenylate kinase (ATP-AMP transphosphorylase) [Prochlorococcus
           marinus str. MIT 9202]
          Length = 182

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 73/218 (33%), Gaps = 51/218 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-----VLL 55
           M   L   F G  GAGK T   LL +           T         E  R       +L
Sbjct: 1   MKRHLL--FLGAPGAGKGTQAELLSQ-----------TNSYLHLSTGELLRKEIDMNTIL 47

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPAL--MEGKILLCDRFLDSSYAYQGERDSSQ 113
              V +     E +       + V  ++R  L       +L            G   +  
Sbjct: 48  GIQVKDIMNRGELV-----SDELVLKIVRQNLVKDNKGWIL-----------DGYPRNLS 91

Query: 114 HLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               +SL E+  +   P +    LD+P ++ +KR+  R    ++          V I++K
Sbjct: 92  QA--NSLNEVLTEINQPLEVVFYLDIPEEVLIKRLLLRGRKDDTEKTIR---TRVDIYKK 146

Query: 173 R----RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
                 Q F D++  +      +D+    ++++++I  
Sbjct: 147 TTEPLIQYFKDLSLLEY-----IDADRDLKTISSDIKQ 179


>gi|150403620|ref|YP_001330914.1| signal recognition particle-docking protein FtsY [Methanococcus
           maripaludis C7]
 gi|150034650|gb|ABR66763.1| signal recognition particle-docking protein FtsY [Methanococcus
           maripaludis C7]
          Length = 383

 Score = 43.1 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 15/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI G GKTT IS L   L+ + Y V +    G T  A A   +           +     
Sbjct: 183 GINGTGKTTSISKLGYILKERGYSVVMAA--GDTFRAGAIEQLEEHGKNTAI--KVIKHQ 238

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             A     + + I  A  +G  ++L D            R ++    +D +++  V+   
Sbjct: 239 KGADSAAVIYDAISHAKAKGIDVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 288

Query: 130 PDCTII 135
           PD  I 
Sbjct: 289 PDLIIF 294


>gi|326914442|ref|XP_003203534.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Meleagris
            gallopavo]
          Length = 4190

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +LK  L +    V   T  P   P     RH LL     +    
Sbjct: 1925 VVIVGPSGAGKSTLWQMLKAALGKTGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 1979

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 1980 SDGVLTNSAR-----QVVREPQDTTSWIICD-------------GDIDPEWIESLNSV 2019


>gi|308467276|ref|XP_003095887.1| hypothetical protein CRE_08501 [Caenorhabditis remanei]
 gi|308244355|gb|EFO88307.1| hypothetical protein CRE_08501 [Caenorhabditis remanei]
          Length = 413

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 1/123 (0%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G   AGKTT + +L++F +    +V++  E   T   +            ++  + 
Sbjct: 38  IAVTGGPSAGKTTAMEILEKFFKDHGCEVYLVPE-AATELQKMGFSFPKLSADRKYNFQK 96

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E I         +  VI        I++ DR +    AY    + S  L    L E  ++
Sbjct: 97  ELINMILYLEGALLRVIGKPEGRDIIIIMDRGVMDPSAYSSPEEWSAILKDLGLNEFELK 156

Query: 127 EVM 129
              
Sbjct: 157 HTR 159


>gi|78187627|ref|YP_375670.1| guanylate kinase [Chlorobium luteolum DSM 273]
 gi|119371257|sp|Q3B204|KGUA_PELLD RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|78167529|gb|ABB24627.1| guanylate kinase [Chlorobium luteolum DSM 273]
          Length = 197

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 44/218 (20%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  + F    G GK+T    +        + V  T  P      +   +  LS    E  
Sbjct: 9   GRLVVFSAPSGTGKSTIARRVLERFPSMRFSVSATTRPMREGEVDGVNYHFLSKEDFESE 68

Query: 64  AE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  E   F       +    R A+ +G  LL D                    LD 
Sbjct: 69  IRNGGFIEHEFFFGNHYGTLLQKTREAMAQGTDLLLD--------------------LDV 108

Query: 120 LQEISVQEVMPD---CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              ++++++ PD      +   P   D+  +R+Q+R S  E +     ER  + +     
Sbjct: 109 KGAMNLKKLFPDSSLLVFL--APPSMDVLKERLQSRKSEDEESLKLRLERARLEL----- 161

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                      DR   V    + +     ++  +   +
Sbjct: 162 --------GFADRFDTVIINDTLEDAVEAVILAISNFL 191


>gi|71894395|ref|YP_278503.1| putative deoxyguanosine kinase [Mycoplasma synoviae 53]
 gi|71851183|gb|AAZ43792.1| putative deoxyguanosine kinase [Mycoplasma synoviae 53]
          Length = 224

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 44/236 (18%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + I   GI G   +GK+T    L +  ++                 E     ++   + +
Sbjct: 1   MLI---GISGMISSGKSTLSKNLNKHYKK------------SMLLNEFQEEDVVFNTMLD 45

Query: 62  FGAEAEAIVFAAARLDHVENVIR-----------PALMEG-KILLCDRFLDSSYAYQGER 109
           +  +    +  A +   VE  I              L +   I+  DRF    Y +    
Sbjct: 46  WFYKNRPHLNIAFQAYVVEKHINEVQSIIREFNSKNLDKNSDIIFLDRFGAEHYVFAKVI 105

Query: 110 DSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
                  +        +E+  ++  P+  I LD+      +R+  R    E         
Sbjct: 106 LEKLPKKILKAYEAIFKELVSKDDFPELAIFLDVSFKNFKERLFKRGREIEINTW----S 161

Query: 165 KDVMIHEKRR----QIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQKR 215
           ++    +K      + F+DI      +  I+D+   + + V    + I+ +  +++
Sbjct: 162 QNEEYFKKLHGVYKKTFIDIVNRYEIKYEIIDTNNLTPKQVELKAIEIINKYKEEK 217


>gi|294786592|ref|ZP_06751846.1| deoxynucleoside kinase [Parascardovia denticolens F0305]
 gi|294485425|gb|EFG33059.1| deoxynucleoside kinase [Parascardovia denticolens F0305]
          Length = 242

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 24/162 (14%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VF 71
           AGK+T   +L   L             +    P       ++     +     A  + V+
Sbjct: 10  AGKSTLTQILSDEL---GTKAFFEPVEDNPVLPLFYHGNKLVEEGKAET-NPYAFLLQVY 65

Query: 72  AAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQH-----LFLDSL 120
              R   +   I+ A+ E   +L DR  + DS +      QG     +      L  + L
Sbjct: 66  FLNRRFAM---IKKAMQEDNNIL-DRSIYEDSIFMKMNTDQGHATEEEWNIYKSLLDNML 121

Query: 121 QEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +E+  + ++  PD  I +D+ ++  L RV+ R    E    D
Sbjct: 122 EELPYAAKKKSPDLMIFVDVNLETMLYRVKKRGRPFEQVDED 163


>gi|149020737|gb|EDL78542.1| rCG31851, isoform CRA_a [Rattus norvegicus]
          Length = 2750

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
             +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     
Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024

Query: 61   EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    ++ ++  +AR      V+R        ++CD                   +++SL
Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066

Query: 121  QEI 123
              +
Sbjct: 2067 NSV 2069


>gi|119512089|ref|ZP_01631182.1| hypothetical protein N9414_07374 [Nodularia spumigena CCY9414]
 gi|119463247|gb|EAW44191.1| hypothetical protein N9414_07374 [Nodularia spumigena CCY9414]
          Length = 509

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 25/160 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
            +G  I   G+ G+GK+T    L R LQ         R+  GG    E     L +    
Sbjct: 340 KAGKLILMSGVSGSGKSTTAKYLARELQAIQIRSDAVRKHLGGISLGERGGDDLYTP--- 396

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   +  A +           +I     +G  ++ D            +   QHL  D++
Sbjct: 397 EMTQKTYARLLNL-------GIILA--QQGFHVILD-----------AKYDKQHLRQDAI 436

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            +    ++ P   I    P+++  +R+ NR      A +D
Sbjct: 437 AQAEKHQL-PLQIIYCTAPLEVVQERLANRTGDIADATVD 475


>gi|12711694|ref|NP_075413.1| cytoplasmic dynein 2 heavy chain 1 [Rattus norvegicus]
 gi|81917503|sp|Q9JJ79|DYHC2_RAT RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName:
            Full=Cytoplasmic dynein 2 heavy chain; AltName:
            Full=Dynein cytoplasmic heavy chain 2; AltName:
            Full=Dynein heavy chain isotype 1B; AltName:
            Full=Dynein-like protein 4
 gi|8777465|dbj|BAA97048.1| cytoplasmic dynein heavy chain [Rattus norvegicus]
          Length = 4306

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
             +G+ I   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     
Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024

Query: 61   EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            +    ++ ++  +AR      V+R        ++CD                   +++SL
Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066

Query: 121  QEI 123
              +
Sbjct: 2067 NSV 2069


>gi|226228307|ref|YP_002762413.1| hypothetical protein GAU_2901 [Gemmatimonas aurantiaca T-27]
 gi|226091498|dbj|BAH39943.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 204

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 14/120 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++F G  G GKTT    L   L+R +  V + +E        A R  L       F A+A
Sbjct: 20  VAFVGTHGVGKTTLCFDLAAQLKRLDLGVDIVKEV-------ARRCPLPINEDTTFDAQA 72

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             +         +   I  A    ++++CDR +  +YAY   R   +      ++E    
Sbjct: 73  WIL------HTQIAEEIEAA-SHYEVVVCDRSVLDNYAYLVARVGRRPELEPLVREWVSG 125


>gi|225849525|ref|YP_002729690.1| adenylate kinase (ATP-AMP transphosphorylase)
           (AK)(superoxide-inducible protein 16) (SOI16)
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644031|gb|ACN99081.1| adenylate kinase (ATP-AMP transphosphorylase)
           (AK)(Superoxide-inducible protein 16) (SOI16)
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 216

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 47/228 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  GAGK T   LLK    R N+    T         +  R  + S       A+ 
Sbjct: 10  IIFLGPPGAGKGTQSQLLKE---RDNFVQIST--------GDLLREAVKSQTSLGIKAKQ 58

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEISV 125
                     D + ++I   L E        F D +  + G   +      L +L  +  
Sbjct: 59  FMDEGKLVPDDLIIDLISEKLEE--------FKDKNIIFDGFPRTVPQAEALKTL--LDK 108

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY----FERKDV 167
           ++   D  I+ ++  +  +KR+  R        +              D       ++D 
Sbjct: 109 KDRKIDAVILFEIDDEEVVKRLSGRRICPNCGAVYHIIFNPPKNDNLCDKCGTPLIQRDD 168

Query: 168 MIHEKRRQI---FLD----IARNQPDRCHIVDSAHSFQSVATNILNIV 208
              E  R+    +      +     D    +D+    + V   I +++
Sbjct: 169 DKEEVIRKRLSVYHSQTAPLIDYYKDILLKIDATKPPEEVYKTIKSVL 216


>gi|145220358|ref|YP_001131067.1| guanylate kinase [Prosthecochloris vibrioformis DSM 265]
 gi|145206522|gb|ABP37565.1| guanylate kinase [Chlorobium phaeovibrioides DSM 265]
          Length = 194

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 42/217 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  + F    G GK+T    + R L    + V   TR            H L +   D
Sbjct: 7   QQGKLVVFSAPSGTGKSTIARRVMRKLPELQFSVSATTRSMRPGEVDGVNYHFLSAEAFD 66

Query: 61  EF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                G   E   F       +      A+ +G+ LL D                    L
Sbjct: 67  GLVRSGGFIEHEFFFGNHYGTLLEKTSEAVRDGRHLLLD--------------------L 106

Query: 118 DSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           D    ++++++ P     + +  P   ++  +R+Q R S  E+      ER  +      
Sbjct: 107 DVKGALNLKKLFPANSLLVFIR-PPSMEVLKERLQGRGSEDEAGLKLRLERASLE----- 160

Query: 174 RQIFLDIARNQPDRCH--IVDSAHSFQSVATNILNIV 208
               L+ A          ++D   +  +V  +I + +
Sbjct: 161 ----LEYADRFDVVFVNDLLD--ETVDAVTDSIRSFL 191


>gi|296084582|emb|CBI25603.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 51/232 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   ++ +     +    D+  +    G+     A+  +          +
Sbjct: 81  ISGAPASGKGTQCEMIVQKFGLVHISTGDLLRSEVSSGSEIGNKAKEYM---DTGRLVPD 137

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              I+   AR+   +   +  L++G                  R  +Q   L+ L+    
Sbjct: 138 EVVIMMVTARISQEDAKEKGWLLDGF----------------PRTFAQAQSLEKLK---- 177

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDYF--ERKDV---------MIHE 171
             + PD  I+LD+P  I + R   R     +     L +F  E +++            E
Sbjct: 178 --IRPDVYIVLDVPDQILIDRCVGRRVDPVTGKIYHLKFFPSENEEIKARLVTRSDDTEE 235

Query: 172 KRRQIFLDIARNQPDRCH--------IVDSAHSFQSVATNILNIVWELVQKR 215
           K +   L+I +   +            VD  HS   V   I +++ ++ Q +
Sbjct: 236 KVKSR-LEIYKKNAEAILSTYSTIMNKVDGNHSKDEVFKPIDSLLSKMQQDK 286


>gi|257054491|ref|YP_003132323.1| Adenylate kinase [Saccharomonospora viridis DSM 43017]
 gi|256584363|gb|ACU95496.1| Adenylate kinase [Saccharomonospora viridis DSM 43017]
          Length = 184

 Score = 43.1 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 69/212 (32%), Gaps = 45/212 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60
           +   G  GAGK T  + L + L         T +        GTP    A+  L S  + 
Sbjct: 4   VVLVGPPGAGKGTQAATLSQRL---GVPHISTGDLFRKHVGEGTPLGREAKRYLDSGELV 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E +          E +  P    G   L D F          R++ Q   L  +
Sbjct: 61  PDTVTNEMV---------RERLAEPDAQSGF--LLDGF---------PRNTKQADVLGEI 100

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179
            E +   +  D  I L +P D  +KR+  R    ++  +            +R+Q++   
Sbjct: 101 LEENGHSL--DAVIELKVPEDELVKRLLGRGRADDTEEVIR----------RRQQVYRSE 148

Query: 180 ---IARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +     D    VD       V+  +L+ +
Sbjct: 149 TAPLLEYYSDILVTVDGIGDVDEVSARVLDAL 180


>gi|219681773|ref|YP_002468159.1| adenylylsulfate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|219682328|ref|YP_002468712.1| adenylylsulfate kinase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471475|ref|ZP_05635474.1| adenylylsulfate kinase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219622061|gb|ACL30217.1| adenylylsulfate kinase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624616|gb|ACL30771.1| adenylylsulfate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon
           pisum)]
 gi|311086152|gb|ADP66234.1| adenylylsulfate kinase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086727|gb|ADP66808.1| adenylylsulfate kinase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087312|gb|ADP67392.1| adenylylsulfate kinase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087822|gb|ADP67901.1| adenylylsulfate kinase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 206

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 36/145 (24%)

Query: 7   IS--FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   F G+ G+GK+T  + L+  L +   +                   LL       G 
Sbjct: 30  IVLWFTGLSGSGKSTIANFLEEILFKNGIN-----------------SYLLDGDNIRSGL 72

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            ++     A R +++     V++  L  G I+L    + S Y  Q E         + L+
Sbjct: 73  CSDLSFSLADRNENIRRIGEVVKMMLHAGLIILV--SVISPYRNQREMVRQMLGKKNFLE 130

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
                       + +D P++I   R
Sbjct: 131 ------------VFIDTPIEICESR 143


>gi|71661369|ref|XP_817707.1| dynein heavy chain [Trypanosoma cruzi strain CL Brener]
 gi|70882914|gb|EAN95856.1| dynein heavy chain, putative [Trypanosoma cruzi]
          Length = 3227

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQR    V      P   P     R  LL    ++    
Sbjct: 1944 VVLVGPGGSGKSTLLRVLRRALQRLGVSVPLYVMNPKAMP-----RTQLLGHMDNDTREW 1998

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AA     + V++        ++CD                   +++SL  +
Sbjct: 1999 FDGVLTEAA-----KKVVKEENDVHSWIVCD-------------GDIDPEWIESLNSV 2038


>gi|309365946|emb|CAP22251.2| hypothetical protein CBG_01006 [Caenorhabditis briggsae AF16]
          Length = 169

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/196 (11%), Positives = 56/196 (28%), Gaps = 46/196 (23%)

Query: 29  QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM 88
           + +     +  E   +P  E     L   G  +    A  ++F+A R       ++  ++
Sbjct: 9   EERG--ALIVFEDRQSPVGEMIDRYL--RGEIDMDEHALHLLFSADR------FLKKKMI 58

Query: 89  EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148
           +  I++                    + +  +    +    PD  +   +  ++   R  
Sbjct: 59  KQHIVV------------KIYGKKNEILIIIIVFRPIGLPKPDIVLFFQVSPEVAASR-- 104

Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR-----NQPDRCHIVDSAHSFQSVATN 203
                      +  E   +           ++A+             V++  +  +V   
Sbjct: 105 ------GGFGNERLETAQLQ---------AEVAKVMPTLRDDAFWKSVNADAALAAVEKE 149

Query: 204 ILNIVWELVQKRVSPL 219
           +  +  EL   R  PL
Sbjct: 150 VFQLYTEL--DRSKPL 163


>gi|217033563|ref|ZP_03438992.1| hypothetical protein HP9810_905g82 [Helicobacter pylori 98-10]
 gi|216944088|gb|EEC23519.1| hypothetical protein HP9810_905g82 [Helicobacter pylori 98-10]
          Length = 191

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 105 AQNEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189


>gi|195454119|ref|XP_002074095.1| GK12802 [Drosophila willistoni]
 gi|194170180|gb|EDW85081.1| GK12802 [Drosophila willistoni]
          Length = 196

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 59/216 (27%), Gaps = 57/216 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  S +    Q                A +  R      G +          
Sbjct: 13  GGPGAGKGTQCSKIVDRFQF-----------THLSAGDLLREERSREGSE---------- 51

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLD-------SL 120
                     ++I   +  GKI+   +      S      +        +D       +L
Sbjct: 52  --------FGSLIEDYIRNGKIVPVEV----TCSLLENAMKNSGKTRFLIDGFPRNQDNL 99

Query: 121 QEISVQ-EVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              + Q     D    +  D   D+ ++R   R         D  E       +KR Q +
Sbjct: 100 DGWNRQMGDKADMQFVLFFDCSEDVCVQRCLGRGQSGSGRSDDNMES-----LKKRIQTY 154

Query: 178 ----LDIAR--NQPDRCHIVDSAHSFQSVATNILNI 207
               L I +      +   +D++     V + +  +
Sbjct: 155 NNDSLPIIKHFENDGKVKTIDASPDADKVFSEVERV 190


>gi|134045929|ref|YP_001097415.1| signal recognition particle-docking protein FtsY [Methanococcus
           maripaludis C5]
 gi|132663554|gb|ABO35200.1| signal recognition particle-docking protein FtsY [Methanococcus
           maripaludis C5]
          Length = 383

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 15/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI G GKTT IS L   L+ + Y   +    G T  A A   +       +   +     
Sbjct: 183 GINGTGKTTSISKLAYILKERGYSAVMAA--GDTFRAGAIEQLEEHGKNTDI--KVIKHQ 238

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             A     + + I  A  +G  ++L D            R ++    +D +++  V+   
Sbjct: 239 KGADSAAVIYDAINHAKAKGLNVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 288

Query: 130 PDCTII 135
           PD  I 
Sbjct: 289 PDLIIF 294


>gi|257126631|ref|YP_003164745.1| guanylate kinase [Leptotrichia buccalis C-1013-b]
 gi|257050570|gb|ACV39754.1| guanylate kinase [Leptotrichia buccalis C-1013-b]
          Length = 181

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 3/95 (3%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I   G  G+GK+T   L+K  L         TR+P            L     ++ 
Sbjct: 2  KGKLIIVSGPSGSGKSTVTKLVKDRLNIPLSISATTRQPRTGEINGKDYFFLTKEIFEQK 61

Query: 63 GAEAEAIVFAAARLDH---VENVIRPALMEGKILL 94
              E   +A    ++   ++ V+   L +G  ++
Sbjct: 62 IKNDEFYEYANVHGNYYGTLKEVVENNLSKGLNVI 96


>gi|297265388|ref|XP_002799179.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like isoform 2 [Macaca
           mulatta]
          Length = 408

 Score = 43.1 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 37/185 (20%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G F  ++ EG++  GKTT    +   L+     V +   P      +  R +      
Sbjct: 247 QKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DDE 297

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----- 114
                 A    ++         + + +      ++ DR+  S+  Y    + S       
Sbjct: 298 PTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLP 352

Query: 115 -------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                   + + L +  +  ++        +  +  L+R+Q R   +     +  E   V
Sbjct: 353 PAHHPVYQWPEDLLKPDLILLL-------TVSPEERLQRLQGRGMEKTREEAE-LEANSV 404

Query: 168 MIHEK 172
              +K
Sbjct: 405 -FRQK 408


>gi|229258560|gb|ACQ45585.1| cell division protein FtsY [Vesicomya sp. endosymbiont]
          Length = 194

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT I  L +  Q +   V +    G T  A A   +++   ++     A+ + 
Sbjct: 45  GVNGSGKTTLIGKLAKSFQDQGKSVMLAA--GDTFRAAAIEQLIIWGRLNNIPVVAQTL- 101

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +  + A  +   IL+ D
Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILIAD 127


>gi|294495862|ref|YP_003542355.1| signal recognition particle-docking protein FtsY [Methanohalophilus
           mahii DSM 5219]
 gi|292666861|gb|ADE36710.1| signal recognition particle-docking protein FtsY [Methanohalophilus
           mahii DSM 5219]
          Length = 351

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ +   L+  N  V +    G T  A A   +  +   +  G + 
Sbjct: 159 IVFVGINGTGKTTSIAKIAHRLKAMNKSVVIAA--GDTFRAGAIDQI--AVHAERIGVKL 214

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       V + ++ A      ++L D            R  +    +  LQ+I  
Sbjct: 215 IKHQEGGDPAAVVYDAVQYAKAHDSDVVLSD---------TAGRMHTNVNLMAQLQKICR 265

Query: 126 QEVMPDCTIILD 137
               PD  + +D
Sbjct: 266 VSP-PDLVLFVD 276


>gi|218691275|ref|YP_002399487.1| hypothetical protein ECED1_3634 [Escherichia coli ED1a]
 gi|218428839|emb|CAR09640.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli ED1a]
 gi|222034707|emb|CAP77449.1| Uncharacterized ATP-binding protein yghR [Escherichia coli LF82]
 gi|312947545|gb|ADR28372.1| hypothetical protein NRG857_14810 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 252

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|167751848|ref|ZP_02423975.1| hypothetical protein ALIPUT_00090 [Alistipes putredinis DSM 17216]
 gi|167660089|gb|EDS04219.1| hypothetical protein ALIPUT_00090 [Alistipes putredinis DSM 17216]
          Length = 208

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 30/219 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVDEFG 63
           ++I+  G  G+GKTT   +L        Y      E    P   +    +       +  
Sbjct: 1   MYIAIAGNIGSGKTTLTEMLTER-----YGAKAYYEQSDNPYIGDFYNDMNRWSFNLQM- 54

Query: 64  AEAEAIVFAAARLDHVENVIR---PALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLDS 119
                  F  +R+    +++R     + + + +  D ++ + +    G           S
Sbjct: 55  ------YFLGSRIQQTMDILRSGPVDIFQDRTVYEDAYIFADNLHRMGLMSGRDFDTYMS 108

Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  +       PD  I L   V   + +++ R    E          D     +    + 
Sbjct: 109 IFGLITNLVPRPDLLIYLKASVPTLISQIRRRGRAYEMNI-------DEQYLRRLNDRYD 161

Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           D   N       ++D     +    +    V E +  R+
Sbjct: 162 DWIENIYRGEVLVID--KDREDFVAD--AAVMEKICARL 196


>gi|255534078|ref|YP_003094450.1| guanylate kinase [Pedobacter heparinus DSM 2366]
 gi|255347062|gb|ACU06388.1| guanylate kinase [Pedobacter heparinus DSM 2366]
          Length = 189

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I F    GAGKTT +  L       ++ +   TRE  G    E   + +     
Sbjct: 1   MKQGKLIIFSAPSGAGKTTIVKHLLTKFPSLSFSISATTRELRGDEKNEKDYYFITKEDF 60

Query: 60  DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96
               A  E +    V++      + + I+    E K ++ D
Sbjct: 61  LHKVARQEFVEFEEVYSGTFYGTLRSEIQRIWDEDKHVIFD 101


>gi|242775628|ref|XP_002478679.1| uridylate kinase Ura6 [Talaromyces stipitatus ATCC 10500]
 gi|218722298|gb|EED21716.1| uridylate kinase Ura6 [Talaromyces stipitatus ATCC 10500]
          Length = 209

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 62/213 (29%), Gaps = 43/213 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T    L R      L   +       RE  G+   E  RH +    +     
Sbjct: 19  GGPGAGKGTQSENLVRDYGFSHLSAGDLLRAEQVRE--GSEYGELIRHHIREGTIVPMEV 76

Query: 65  EAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +    AA L+   +   PA          RFL   +  Q          +D     
Sbjct: 77  TVALLSNAMAAILEQNSSKATPA----------RFLIDGFPRQ----------IDQAHFF 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEK-----RRQI 176
                +    + L  P ++ L R+  R         D  E  RK     E+      R+ 
Sbjct: 117 EETVCVSKLVLFLSCPEEVMLSRLLKRGETSGRDD-DNIESIRKRFRTFEQTSMPVVREF 175

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                  +  +   V++  S + V   I   + 
Sbjct: 176 ------EEKGKVISVEATGSKEEVYERIKAELK 202


>gi|118094486|ref|XP_422391.2| PREDICTED: similar to adenylate kinase 5 [Gallus gallus]
          Length = 573

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 59/237 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCG 58
            FI   G  G+GK++    L    ++  +    T           +  ++  + ++    
Sbjct: 379 FFIV--GGPGSGKSSQCEQLA---KKYGFTHLSTANLLQNELSSLSERSKFIKDIMECGE 433

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               G   E +          +  +   L + K  L D +                  L 
Sbjct: 434 PVPGGIVLELL----------KEAMITNLGDTKGFLIDGYPC---------------ELK 468

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-----RKDVMIHEKR 173
             +E   +   P     LD   +     + +RY +R      +F+     ++ +      
Sbjct: 469 EAEEFESKIGEPKLVFCLDCSAET----MNSRYLMRNQTSQ-HFDSAETIKEGI------ 517

Query: 174 RQIFLDIAR---NQPDR---CHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
            + +   A+      +R      VD+  + + V  ++   +  L++K  +  S++  
Sbjct: 518 -EGYCQAAKPLTAYYERKTQLCKVDAEGTAEDVFLDVCKSIDSLLKKEEAAFSTETQ 573


>gi|157122962|ref|XP_001653786.1| adenylate kinase isoenzyme [Aedes aegypti]
 gi|157122964|ref|XP_001653787.1| adenylate kinase isoenzyme [Aedes aegypti]
 gi|108874575|gb|EAT38800.1| adenylate kinase isoenzyme [Aedes aegypti]
 gi|108874576|gb|EAT38801.1| adenylate kinase isoenzyme [Aedes aegypti]
          Length = 202

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 63/208 (30%), Gaps = 28/208 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  G GK T    +       ++    + RE    G+   +  + ++          EA 
Sbjct: 15  GGPGCGKGTQCEKIVAKYNFSHFSTGDLLREEVASGSDKGKELQEMMKQG--ILVPNEAV 72

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             +  AA    + + +              +L   Y  +  +      F+  +       
Sbjct: 73  LKLLEAAMAKALSSTVG-------------YLIDGYPREPAQGPEFEKFIAPV------- 112

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
              D  +  +   +  + R+  R S   +   D  E          R+    I    P +
Sbjct: 113 ---DIILYFECSNETLVARILKRASESATVRADDNEETLKTRIATFRENTEKILVQYPTQ 169

Query: 188 CHIVDSAHSFQSVATNILNIVWELVQKR 215
              +++  + + +  ++   + EL+  +
Sbjct: 170 LKRINAERAPEEIFADVEKFIDELLAAK 197


>gi|297482614|ref|XP_002707773.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Bos taurus]
 gi|296480384|gb|DAA22499.1| cytoplasmic dynein 2 heavy chain 1-like [Bos taurus]
          Length = 4316

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     +    
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|227327239|ref|ZP_03831263.1| shikimate kinase II [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 173

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 44/211 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  G GKTT    L + L    YD   T              V+   G  
Sbjct: 1   MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F                       AL +   +  +R + ++    G            +
Sbjct: 56  GFRQRESL-----------------ALQQ---VTSNRCIVAT----GGGMVLAEANRRFM 91

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178
            +           I L    ++  +R++      +   L      +++      R+  + 
Sbjct: 92  HDKGT-------VIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +A       H++D++ + +++  ++L  + 
Sbjct: 145 GVAH------HVIDASQTPEAIVASVLKALR 169


>gi|194673141|ref|XP_589775.4| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Bos taurus]
          Length = 4314

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     +    
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|146310520|ref|YP_001175594.1| shikimate kinase II [Enterobacter sp. 638]
 gi|166988288|sp|A4W763|AROL_ENT38 RecName: Full=Shikimate kinase 2; Short=SK 2
 gi|145317396|gb|ABP59543.1| shikimate kinase [Enterobacter sp. 638]
          Length = 174

 Score = 43.1 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 48/213 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  G GKTT    L R  Q +  D   T     T A      ++   G +
Sbjct: 1   MTQPIFLV--GPRGCGKTTVGLELARACQSQFVD---TDHWLQTKAGRTIAEIVEKEGWE 55

Query: 61  EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            F A E E +                A+     ++                         
Sbjct: 56  TFRALETETL---------------KAVSAPSTVI------------ATGGGI------I 82

Query: 120 LQEISVQEVMPD-CTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQI 176
           L E +   +      I L  PV   ++R++       R +        +   +  +R  +
Sbjct: 83  LAEHNRGFMREHGIVIYLCAPVATLVERLEAFPEEGQRPTLTGKPISDEVSEVLAERDAL 142

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           + + A       H+VD++ + + V ++I+  + 
Sbjct: 143 YREAAH------HVVDASQTPEQVVSHIVTALR 169


>gi|224054041|ref|XP_002191299.1| PREDICTED: putative NADH dehydrogenase ubiquinone 1 alpha
           subcomplex 10 variant 2 [Taeniopygia guttata]
          Length = 357

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 18/163 (11%)

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISV 125
              R+    + +   L  G+ ++ +R   S + +      QG            ++EIS+
Sbjct: 138 FGNRILQYADALEHLLSTGQGVVLERSPYSDFVFLDAMLKQGYVHKRCLDHYKEVKEISI 197

Query: 126 QEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL-DIAR 182
            E++P    I +D+PV    KR+Q +    E      Y +  +    +     FL +I+ 
Sbjct: 198 SELLPPHLVIYVDVPVPEVQKRIQEKGKPYEKKVSPSYLQSIEDAYKK----TFLPEISE 253

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           +     +   +A   + V  +I     E ++    P   + D+
Sbjct: 254 SSEVLQYTATAAEDVEKVIEDI-----EYLKFDKGPWVEQDDV 291


>gi|145510889|ref|XP_001441372.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408622|emb|CAK73975.1| unnamed protein product [Paramecium tetraurelia]
          Length = 223

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 85/230 (36%), Gaps = 37/230 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDEFG 63
            IS EG  G+GK+T + L    +Q+K  D+    EP              LL    +E  
Sbjct: 8   LISIEGNIGSGKSTLLRL----MQQKYPDLRFIAEPVNEWQSINGDPSLNLLGSFYEEPS 63

Query: 64  AEAEAIVFAAA--RLDHVENVIRPAL--MEGKILLCDRFLDS---SYAYQGERDS----- 111
             A  +   A   RL H + V+   L   +  ++L +R +++    +A  G ++      
Sbjct: 64  RWAYTMQVYAFYSRLKHWKEVLSDPLNPEDRHLILSERSIEADKEIFAVNGHKNGMINNL 123

Query: 112 ---SQHLFLDSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  F D L +     ++     I L +  D            +E+   +   ++ +
Sbjct: 124 EFALYEKFYDWLCDEVFGKKIQKQMIIYLQVDPD------------QENEEKNTISKEYL 171

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQS--VAT-NILNIVWELVQK 214
                R + +L    +Q     +++    F+S  V    + N + + +Q+
Sbjct: 172 TQIHNRHEEWLLRETHQNTSILVLNGDKEFESDLVQQSKLFNSIDQFLQE 221


>gi|90421123|ref|ZP_01229025.1| cell division protein FtsY [Aurantimonas manganoxydans SI85-9A1]
 gi|90334615|gb|EAS48395.1| cell division protein FtsY [Aurantimonas manganoxydans SI85-9A1]
          Length = 362

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L R    V +    G T  A A   + +     +    A+AI 
Sbjct: 163 GVNGTGKTTTIGKLAAKLTRGGLKVTLCA--GDTFRAAAVEQLKIWGERTQSEVVAKAI- 219

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128
             A            A+  G  +L    +D+       R  ++   +  L++I   +Q+ 
Sbjct: 220 -GADAASLAYEGYDRAVENGSDVLI---IDT-----AGRLQNKTELMAELEKIVRVLQKR 270

Query: 129 MPDC--TIILDLPVDIGLKRVQNRYSLRESACLD 160
            PD   T++L L    G   +      R  A ++
Sbjct: 271 EPDAPHTVLLTLDATTGQNAMNQVEIFRNVAGVN 304


>gi|73954875|ref|XP_851166.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2
            isoform 2 [Canis familiaris]
          Length = 4309

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L R    V   T  P   P     RH LL     +    
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|169631260|ref|YP_001704909.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium abscessus ATCC 19977]
 gi|169243227|emb|CAM64255.1| CysN/CysC bifunctional enzyme [Mycobacterium abscessus]
          Length = 632

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 26/140 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+  +GK+T    L+R L  +    +                  L       G  A
Sbjct: 464 IWITGLSASGKSTVAVELERRLVARGIPAYR-----------------LDGDNLRHGLNA 506

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +    AA R ++V  V   A+ +   +L D  + +  A      + +       ++  + 
Sbjct: 507 DLGFSAADRAENVRRV--GAVAQ---ILSDSGVVAVAALISPYRADRDKIRAQHEKAGLP 561

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            V     + +D PV+I  +R
Sbjct: 562 FVE----VFVDTPVEICEQR 577


>gi|229367842|gb|ACQ58901.1| Thymidine kinase 2, mitochondrial precursor [Anoplopoma fimbria]
          Length = 278

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 64/207 (30%), Gaps = 30/207 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------VLLSCGVD 60
           I  EG   +GKTT +   ++     N +V    EP      +  R       +       
Sbjct: 70  ICIEGNIASGKTTCLEYFQKT---SNIEVLT--EPVSKW--KNIRGHNPLALMYQDPERW 122

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFL-D 118
               +    +    R  H+  +  P  M  + +   +++   +    G+     +  L +
Sbjct: 123 GITLQTYVQLTMLDR--HLSAMTAPVRMMERSIFSAKYIFVENLFRSGKMPEVDYAVLSE 180

Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
               I+    +P D  + L        KR++ R    E           +   E   Q++
Sbjct: 181 WFDWITTNISIPVDLIVYLQTSPQTCHKRLKQRSREEEKVIP-------LEYLESIHQLY 233

Query: 178 LD-IARNQ----PDRCHIVDSAHSFQS 199
            D + +      P    ++ +    Q 
Sbjct: 234 EDWLVKQNSSPLPAPVLVIPADGDLQK 260


>gi|212696158|ref|ZP_03304286.1| hypothetical protein ANHYDRO_00694 [Anaerococcus hydrogenalis DSM
          7454]
 gi|325846654|ref|ZP_08169569.1| guanylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212676787|gb|EEB36394.1| hypothetical protein ANHYDRO_00694 [Anaerococcus hydrogenalis DSM
          7454]
 gi|325481412|gb|EGC84453.1| guanylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 198

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M  G  +   G  G GK T +  L    +   Y V   TR+         +         
Sbjct: 1  MKKGFLLVISGPSGVGKGTVLHDLMNTQKNLVYSVSVTTRKQRPGEIEGVSYFFKSHEEF 60

Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94
          ++   E + + FA    ++    +  +   + EGKI++
Sbjct: 61 EKMIEEDKFLEFAKVHDNYYGTPKEFVEEKINEGKIVI 98


>gi|74313617|ref|YP_312036.1| hypothetical protein SSON_3220 [Shigella sonnei Ss046]
 gi|73857094|gb|AAZ89801.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 252

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 80/237 (33%), Gaps = 54/237 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAI------VFAA--------ARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++      ++AA         R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCLSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            Y G     +                  Q+++     P+  I L + ++  + R      
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193

Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  DY E +D + +  K    +         +   +DS   +  V       V
Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239


>gi|320164451|gb|EFW41350.1| guanylate kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 213

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 37/215 (17%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62
           I   G  GAGK+T +  L   F     + + H TR+P   P  E  R    +   D    
Sbjct: 27  IVLAGPSGAGKSTLLKKLMAEFPNAFGFSISHTTRKP--RPGEEHGREYWFTTREDLIRG 84

Query: 63  ---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              G   E+  F+       +  +   +  GKI + D         QG +          
Sbjct: 85  VAAGEFIESAEFSGNMYGTSKRAVEDVVRRGKICVLD------IDMQGVKSVKNTD---- 134

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L    V    P  T       ++  KR+++R +  E +     +             +  
Sbjct: 135 LNARFVFVQPP--TF------ELLEKRLRDRNTETEESLRKRLDTAKGEF------EYAA 180

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +  +      I++   +      ++  IV E + K
Sbjct: 181 LPGSYD--FTIIN--DNLDQAYADLRAIVLEDISK 211


>gi|225027329|ref|ZP_03716521.1| hypothetical protein EUBHAL_01585 [Eubacterium hallii DSM 3353]
 gi|224955331|gb|EEG36540.1| hypothetical protein EUBHAL_01585 [Eubacterium hallii DSM 3353]
          Length = 224

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 5/122 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   AGKTT +S ++     + Y V    E      +      + S   +    + 
Sbjct: 25  IVITGGPCAGKTTGMSWIQNAFTERGYRVLFISETATELISGGVAPWICSDNTEYQKCQM 84

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           +  +      + V       +   KI ++CDR    + AY  E D S  L    L E+ +
Sbjct: 85  KLQL----EKEKVFEQAARTMNSDKILIVCDRGTLDNKAYMTEADFSLVLNELGLNEVEL 140

Query: 126 QE 127
           ++
Sbjct: 141 RD 142


>gi|197128637|gb|ACH45135.1| putative NADH dehydrogenase ubiquinone 1 alpha subcomplex 10
           variant 2 [Taeniopygia guttata]
          Length = 359

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 18/163 (11%)

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISV 125
              R+    + +   L  G+ ++ +R   S + +      QG            ++EIS+
Sbjct: 140 FGNRILQYADALEHLLSTGQGVVLERSPYSDFVFLDAMLKQGYVHKRCLDHYKEVKEISI 199

Query: 126 QEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL-DIAR 182
            E++P    I +D+PV    KR+Q +    E      Y +  +    +     FL +I+ 
Sbjct: 200 SELLPPHLVIYVDVPVPEVQKRIQEKGKPYEKKVSPSYLQSIEDAYKK----TFLPEISE 255

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
           +     +   +A   + V  +I     E ++    P   + D+
Sbjct: 256 SSEVLQYTATAAEDVEKVIEDI-----EYLKFDKGPWVEQDDV 293


>gi|167045473|gb|ABZ10127.1| putative phosphoribulokinase / Uridine kinase family protein
           [uncultured marine microorganism HF4000_APKG10F17]
          Length = 199

 Score = 43.1 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 42/195 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLL-SCGVDEF 62
           I   GI+ +GKTT   L+ ++      +     +         +E  +  +  S   ++ 
Sbjct: 24  IGINGIDCSGKTTFAKLVSKYFTHYKIENVCRDIDNFNNPAIESETYKAFVSGSWDEEDL 83

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SL 120
               E I+  +        V+  +  +  +++                  + +F+    L
Sbjct: 84  NKYYELIINFSD----ATRVVSESKKKYSVVI-----------------LEGIFIYKPQL 122

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +I       D  I LD+ + +G KR  + R   R+    D ++   ++ H +    +  
Sbjct: 123 VDIF------DLKIYLDIDISLGRKRFAKRRSIERDKRPFDIYDEIWMLSHLR----YE- 171

Query: 180 IARNQPDRC--HIVD 192
            +   P R    ++D
Sbjct: 172 -SEVHPKRISDLVID 185


>gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
 gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2]
          Length = 443

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 17/127 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAI 69
           G++G+GKTT ++ L R+ Q++ Y V V       P A      LL    ++ FG   E  
Sbjct: 107 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPQE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 +      ++    +G  +++ D            R   +   ++ +++I  + +
Sbjct: 165 ---KDAIKLAREGVKHFKEKGVDLIIVD---------TAGRHKEEKNLIEEMRQI-SEAI 211

Query: 129 MPDCTII 135
            P   I+
Sbjct: 212 NPHEVIL 218


>gi|221130176|ref|XP_002164511.1| PREDICTED: similar to adenylate kinase 5 [Hydra magnipapillata]
          Length = 400

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 39/215 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDE 61
             I   G  G GK T  SL+ +     +    D+        T      ++++      +
Sbjct: 9   KIIFILGGPGCGKGTQCSLISKKFDMAHISAGDLLRLEAENDTEIGLMIKNMMKEG---Q 65

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDS 119
              +   I       D ++  IR       IL+ D F    S    QG +   +      
Sbjct: 66  LVPQEIVI-------DLLKEAIRKNQHSNGILI-DGFPREYS----QGLKFEIEVCPSS- 112

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIF 177
                         +  D   +I ++R+ +R   S R    ++  +++  + H K     
Sbjct: 113 ------------LILYYDCHDEILVERLVSRGQQSGRIDDNIETIKKRLQLFHTKT---- 156

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             +  +  D+  ++DS+ S + V      IV  L+
Sbjct: 157 TPLLVDYKDKVQVIDSSKSIEEVFIESSRIVSCLL 191


>gi|14520695|ref|NP_126170.1| signal recognition particle protein Srp54 [Pyrococcus abyssi GE5]
 gi|12230641|sp|Q9V1E8|SRP54_PYRAB RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|5457911|emb|CAB49401.1| srp54 signal recognition particle, subunit SRP54 [Pyrococcus abyssi
           GE5]
          Length = 443

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 17/127 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAI 69
           G++G+GKTT ++ L R  Q++ Y V V       P A      LL    ++ FG   E  
Sbjct: 107 GVQGSGKTTTVAKLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 +   +  +     +G  +++ D            R   +   ++ ++ I   E+
Sbjct: 165 ---KDAIKLAKEGVEHFKAKGVDLIIVD---------TAGRHKEEKDLIEEMRMI-SNEI 211

Query: 129 MPDCTII 135
            P   I+
Sbjct: 212 KPHEVIL 218


>gi|110638262|ref|YP_678471.1| hypothetical protein CHU_1863 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280943|gb|ABG59129.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 320

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 31/78 (39%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +S L I   G+EG+ K+T+   + + L  + YDV +    G +           S    +
Sbjct: 57  SSKLMIVSHGLEGSSKSTYARWMAKRLIAEGYDVLIWNFRGCSDTPNRLLRFYHSGDSQD 116

Query: 62  FGAEAEAIVFAAARLDHV 79
                E  VF A   D +
Sbjct: 117 LRTMLELAVFPADYQDLI 134


>gi|47570216|ref|ZP_00240869.1| uridine kinase, putative [Bacillus cereus G9241]
 gi|47553122|gb|EAL11520.1| uridine kinase, putative [Bacillus cereus G9241]
          Length = 186

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 74/213 (34%), Gaps = 38/213 (17%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     IS   + G GKTT    L   L                      + +      
Sbjct: 1   MNKNTKVISIAAVSGGGKTTVTERLTHKLINS-------------------KALYFDSYH 41

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A+   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 42  FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----VIIDYPFAY 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L     Q +  D TI +D P+DI + R   R    E+    + + K  M     R+ +L+
Sbjct: 92  LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEIHNDLKHYMTFA--RKAYLE 147

Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWEL 211
              N +P+   I+D + S   +   I + V EL
Sbjct: 148 AIHNVKPNSDIILDGSLSVAEI---IDHAVEEL 177


>gi|315297639|gb|EFU56916.1| conserved hypothetical protein [Escherichia coli MS 16-3]
          Length = 256

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 27  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 87  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 146 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 197


>gi|119590258|gb|EAW69852.1| guanylate kinase 1, isoform CRA_b [Homo sapiens]
 gi|119590260|gb|EAW69854.1| guanylate kinase 1, isoform CRA_b [Homo sapiens]
          Length = 263

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 75/226 (33%), Gaps = 47/226 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 67  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 113

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G D +    E +     R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 114 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 164

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +         
Sbjct: 165 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 221

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +           +  +P    +V    S       +   + E ++K
Sbjct: 222 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 257


>gi|313674513|ref|YP_004052509.1| signal recognition particle subunit ffh/srp54 (srp54) [Marivirga
           tractuosa DSM 4126]
 gi|312941211|gb|ADR20401.1| signal recognition particle subunit FFH/SRP54 (srp54) [Marivirga
           tractuosa DSM 4126]
          Length = 443

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G+GKTT    L   L+++   V +       PAA     VL     ++ G E 
Sbjct: 102 ILISGLQGSGKTTFSGKLANRLKKQGKQVLLAACDIYRPAAIDQLKVL----GEQIGVEV 157

Query: 67  EAIVFAAARLDHVENVIRPALMEGK-ILLCD 96
            A       +   +N I+ A   GK I++ D
Sbjct: 158 YAEPENKDAVKIAKNAIKFAKDNGKSIVIVD 188


>gi|313124889|ref|YP_004035153.1| signal recognition particle-docking protein ftsy [Halogeometricum
           borinquense DSM 11551]
 gi|312291254|gb|ADQ65714.1| signal recognition particle-docking protein FtsY [Halogeometricum
           borinquense DSM 11551]
          Length = 446

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 35/201 (17%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67
           F G+ G GKTT I+ + R+ +++   V +         A E  R        +    +  
Sbjct: 253 FTGVNGVGKTTSIAKMARYFEKQGLSVVLANGDTYRAGANEQIRK-----HAENLDTKII 307

Query: 68  AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +          + + +  A      ++L D            R  + +  +  L++I  +
Sbjct: 308 SHEQGGDPAAVIYDAVEYAEAHDIDVVLGD---------TAGRLHTSNDLMAQLEKID-R 357

Query: 127 EVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC-----LDYFERKDVMI---------- 169
            V PD T+ +D  +     ++R +      E         D        I          
Sbjct: 358 VVEPDLTLFVDEAVAGQDAVERAKQFNEAAEIDGAVLTKADADSNGGAAISIAYVTGKPI 417

Query: 170 -HEKRRQIFLDIARNQPDRCH 189
                 Q + DI +  P+R  
Sbjct: 418 LFLGVGQGYDDIEQFDPERMV 438


>gi|156743927|ref|YP_001434056.1| nucleoside-triphosphate--adenylate kinase [Roseiflexus castenholzii
           DSM 13941]
 gi|156235255|gb|ABU60038.1| Nucleoside-triphosphate--adenylate kinase [Roseiflexus castenholzii
           DSM 13941]
          Length = 226

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 39/162 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T      ++L+     VHV          +  R  L         A++
Sbjct: 3   IILLGAPGAGKGTQ----AKYLEEHTGMVHVAS-------GDLFRAALRQGTELGMLAKS 51

Query: 67  EAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   R + V          E + +P  + G  ++ D F          R   Q   
Sbjct: 52  -----YMDRGELVPDEVVIRMIIERISKPDCIRG--VIFDGF---------PRTREQARA 95

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           L++  E++ Q    D  + + +P D+ L+R+  R + +    
Sbjct: 96  LEA--ELNKQGRRIDVVLYIRVPEDMLLRRIAGRQTCKTCGA 135


>gi|73954869|ref|XP_536596.2| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2
            isoform 1 [Canis familiaris]
          Length = 4306

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L R    V   T  P   P     RH LL     +    
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|52141882|ref|YP_084943.1| hypothetical protein BCZK3358 [Bacillus cereus E33L]
 gi|51975351|gb|AAU16901.1| conserved hypothetical protein [Bacillus cereus E33L]
          Length = 157

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 31/144 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 30  ISLQGPMASGKTT----LAKRLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 78

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115
               F A +   +E  I+     +G +++ DR          F  ++   + + ++    
Sbjct: 79  ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 134

Query: 116 FLDSLQEISVQEVMPDCTIILDLP 139
            L  L+E        D    LD+ 
Sbjct: 135 ELYKLRE-----CRSDAIFYLDVS 153


>gi|15920615|ref|NP_376284.1| cytidylate kinase [Sulfolobus tokodaii str. 7]
 gi|22001671|sp|Q975K7|KCY_SULTO RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|15621398|dbj|BAB65393.1| 180aa long hypothetical adenylate kinase [Sulfolobus tokodaii str.
           7]
          Length = 180

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 77/216 (35%), Gaps = 41/216 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I   G  G+GK+T   +L + L  K     H+ RE               +    E  
Sbjct: 1   MIIVISGPPGSGKSTVAKILSKNLSLKYISAGHIFRELAEKEGLSLLELNKKAEENFEID 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + +  +F  A  +  +N+I  + + G  L                          L++I
Sbjct: 61  KKIDREIFRIASTE--KNIIIESHI-GGWL--------------------------LKDI 91

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIAR 182
           +      D T+ L+  ++I   R+  R ++  +  ++   ER++   H +R   +  I  
Sbjct: 92  A------DITVYLNASIEIRAMRIAKRDNIPFTKAIEQIIEREES--HSRRFLAYYGIDL 143

Query: 183 NQPDRC-HIVDS-AHSFQSVATNILNIVWELVQKRV 216
           +       ++++       ++  I   +  ++ K +
Sbjct: 144 SDLSVFDLVINTDNLQPDEISKIIEAYLNFMLAKNI 179


>gi|195970178|ref|NP_385483.2| adenylate kinase [Sinorhizobium meliloti 1021]
 gi|307314380|ref|ZP_07593986.1| adenylate kinase [Sinorhizobium meliloti BL225C]
 gi|307322092|ref|ZP_07601468.1| adenylate kinase [Sinorhizobium meliloti AK83]
 gi|20138494|sp|Q93FE6|KAD_RHIME RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|16588799|gb|AAL26898.1| adenylate kinase [Sinorhizobium meliloti]
 gi|187904170|emb|CAC45956.2| Probable adenylate kinase [Sinorhizobium meliloti 1021]
 gi|306892274|gb|EFN23084.1| adenylate kinase [Sinorhizobium meliloti AK83]
 gi|306899078|gb|EFN29720.1| adenylate kinase [Sinorhizobium meliloti BL225C]
          Length = 192

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 68/209 (32%), Gaps = 31/209 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T   LL     R       T         +  R  +      E G  A+A
Sbjct: 5   FLGPPGAGKGTQAKLLTE---RYGIPQLST--------GDMLRTAV--AQATEVGKRAKA 51

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISV 125
           ++        V + I         ++ DR   +  A     D        ++   + +  
Sbjct: 52  VM---DAGQLVSDEIVNE------IVSDRIDSADCARGFILDGYPRTVPQAVALDRMLEE 102

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181
           + +  D  I L +     ++R++NR +   +A        +     +R Q + +    ++
Sbjct: 103 KGLKLDAVIELKVDEAALVRRMENRVTETVAAGGTVRSDDNPEAFRRRLQEYREKTAPLS 162

Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIV 208
            +     R   VD      +V   I  I+
Sbjct: 163 EHYARTGRLKTVDGMADVHTVTAEIEKIL 191


>gi|73954873|ref|XP_863210.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2
            isoform 4 [Canis familiaris]
          Length = 4312

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L R    V   T  P   P     RH LL     +    
Sbjct: 1981 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2035

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2036 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2075


>gi|71666527|ref|XP_820221.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885558|gb|EAN98370.1| hypothetical protein Tc00.1047053509965.20 [Trypanosoma cruzi]
          Length = 677

 Score = 43.1 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 49/228 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G    GK+T ++ L+  + ++  Y V    E            +L++ G+      
Sbjct: 132 ICLTGGPCGGKSTLLTQLQAKMPQRTGYKVFCVPEAAT---------LLVTGGMVWNSDL 182

Query: 66  AEAIVFAAARLD--HVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            E    A  R+     +     A+  G   I++ DR      A+      S+ +F   L+
Sbjct: 183 IEEQQLALIRVQIGLEDQFYNVAMASGAPSIVISDRGTMDGRAF-----CSEEIFERILR 237

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD---YFER--KDVMI 169
            ++             + ++    R       V      +E   LD    +E   + V  
Sbjct: 238 RLN-------------VTLETLRDRYDAVIHLVTAASGAKEYYNLDNPSRYENVEEAVES 284

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +K RQ+++      P    I+D++ +F+      L++V +++ +R S
Sbjct: 285 DKKLRQVYV----GHPM-LRIIDNSTTFEEKMERGLSLVGQVIGQRFS 327


>gi|319790373|ref|YP_004152006.1| guanylate kinase [Thermovibrio ammonificans HB-1]
 gi|317114875|gb|ADU97365.1| guanylate kinase [Thermovibrio ammonificans HB-1]
          Length = 227

 Score = 42.7 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 36/172 (20%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I      G GKTT   +L + +    + V + TR P          H +     + 
Sbjct: 7   KGLLIVVSAPSGTGKTTLCHMLLKEIPTLEFSVSYTTRPPREGEVDGRDYHFVTKEQFER 66

Query: 62  FGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
              E + +        ++  ++       +  AL EG+ +L D  +D+  A Q +++   
Sbjct: 67  MIEEGDFLEWANVYGNLYGTSKSQ-----VLKALEEGRDILLD--IDTQGALQVKKN--- 116

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                           P+  +I  LP    L+ ++ R   R +   +  ER+
Sbjct: 117 ---------------FPEAVLIFILPP--SLEELERRLRKRGTDPEEVIERR 151


>gi|222102163|ref|YP_002546753.1| uridine kinase [Agrobacterium radiobacter K84]
 gi|221728280|gb|ACM31289.1| uridine kinase [Agrobacterium radiobacter K84]
          Length = 117

 Score = 42.7 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 4  GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          G  I   +G++G+GKTT    L   L +K   V 
Sbjct: 20 GRLIVAIDGVDGSGKTTFADELAPVLTQKGRPVV 53


>gi|209735388|gb|ACI68563.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial
           precursor [Salmo salar]
 gi|209735808|gb|ACI68773.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial
           precursor [Salmo salar]
 gi|303657723|gb|ADM15891.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial
           precursor [Salmo salar]
          Length = 351

 Score = 42.7 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 69/223 (30%), Gaps = 28/223 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTRE----PGGTPAAEAARHV 53
             IS +G   +GK      L   L          +Y   +T E    P       +    
Sbjct: 58  KIISIDGNLASGKGALAQNLAEKLGMLYMPEPDTHYLDKMTAEKAPLPTAFNGNCSLEKF 117

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QG 107
                  +  +          RL    + +   L  G+ ++ +R   S   +      QG
Sbjct: 118 YRDPKAADGNSYRLQAWMYLVRLLQWSDAMEHLLTTGQGVVLERSPYSDMVFVEAMFKQG 177

Query: 108 ERDSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                     + ++ IS+ + + P   I +D+P +   K+++          L   E   
Sbjct: 178 YIRKQCVDHYNEIKGISICEFLPPHLVIYVDMPAEEVQKKLKASGKDVPLPYLKSIE--- 234

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSA--HSFQSVATNILNI 207
              ++K    +L       +     D+      + +A +I ++
Sbjct: 235 -DAYKKT---YLPKISENAE-LLAYDATQAQDIERIAEDIEDL 272


>gi|73954871|ref|XP_863187.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2
            isoform 3 [Canis familiaris]
          Length = 4318

 Score = 42.7 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L R    V   T  P   P     RH LL     +    
Sbjct: 1981 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2035

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2036 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2075


>gi|149182838|ref|ZP_01861299.1| dephosphocoenzyme A kinase [Bacillus sp. SG-1]
 gi|148849453|gb|EDL63642.1| dephosphocoenzyme A kinase [Bacillus sp. SG-1]
          Length = 200

 Score = 42.7 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 64/228 (28%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTR----------EPGGTPAAEAARHVLLSC 57
           G+ G   +GK+T   LL +    K + V              EP      E    V+L+ 
Sbjct: 6   GLTGGIASGKSTVSKLLIQ----KGFTVVDADAAARKAVAPGEPALEKIIEVFGEVILNP 61

Query: 58  GV--------------DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                           +E   E   IV  A R   +    +      + ++ D       
Sbjct: 62  DGTLNRSALGDIIFTSEERRKELNGIVHPAVRAQMLAEKDQAFESGKQTVIMD------- 114

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                      LF  +L  +       D TI++ +  +  LKR+  R SL         +
Sbjct: 115 --------IPLLFESNLTWMV------DRTIVVYVDRETQLKRLMKRNSLTVEEATARIQ 160

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            + + + EK      ++A+       ++D+  + ++    +  ++   
Sbjct: 161 SQ-MPLQEK-----KNLAQA------VLDNTGTIENTLEQLDELIVRW 196


>gi|15669239|ref|NP_248044.1| putative kinase [Methanocaldococcus jannaschii DSM 2661]
 gi|3123086|sp|Q58450|KAD6_METJA RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|1499895|gb|AAB99053.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 177

 Score = 42.7 bits (100), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 64/211 (30%), Gaps = 56/211 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GKTT   +L+  L      V            EA +   L    DE     
Sbjct: 3   IAITGTPGVGKTTISKVLRDRL---GIKVI--------DITEAVKKYKLYTEKDEDMDSY 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                     + +E  I     + K ++ D  +                           
Sbjct: 52  VIDF------EKLEKFIDEIEEKEKTIILDGHV-------------------------SH 80

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-P 185
            + PD  I+L    +I  +R++ R    +             + E  +   LD+   +  
Sbjct: 81  LLNPDYIIVLRCNPEIIKERLEKRGYKPKK------------VLENIQAEILDVCLCESK 128

Query: 186 DRCHIVDSA-HSFQSVATNILNIVWELVQKR 215
            + + +D+     +++   I+  +    +++
Sbjct: 129 GKVYEIDTTNRDVENIVDEIIEAIKHKKERK 159


>gi|291238023|ref|XP_002738925.1| PREDICTED: bifunctional 3-phosphoadenosine 5-phosphosulfate
           synthase-like [Saccoglossus kowalevskii]
          Length = 627

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 47/223 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I F G+ GAGKTT    L+ +L  K         P      +  RH L       F
Sbjct: 54  RGCTIWFTGLSGAGKTTVSFALEDYLCSKGI-------PTYALDGDNLRHGL--NKNLGF 104

Query: 63  GAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             +         R +++  V  +     +G I+          A+       +       
Sbjct: 105 SPD--------DREENIRRVGEVAKLFADGGIV-------CLTAFISPFRKDRQSARKIH 149

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           QE  +        I +D P+++  +R V+  Y    +  +  F    +       Q + +
Sbjct: 150 QESGLPFFE----IFVDTPLEVCEQRDVKGLYKKARAGMIKGF--TGID------QAYEE 197

Query: 180 IARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLSS 221
            A         +     +       +L ++ E   + + PLS+
Sbjct: 198 PANAD----LTIKGGECTIDEAVNQVLQLLQE---RNILPLSA 233


>gi|309809769|ref|ZP_07703623.1| deoxyadenosine kinase [Lactobacillus iners SPIN 2503V10-D]
 gi|308169948|gb|EFO71987.1| deoxyadenosine kinase [Lactobacillus iners SPIN 2503V10-D]
          Length = 214

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++   +L   L  +           G P        +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTKILADELHGQ----AFYENVDGNP--------ILPLFYKDMSKYT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     ++H    I  A      ++ D   + DS +       G  DS++      L
Sbjct: 52  --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
               +++V       PD  I +   +D  LK ++ R  + E    D
Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154


>gi|259500736|ref|ZP_05743638.1| deoxyadenosine kinase [Lactobacillus iners DSM 13335]
 gi|302190811|ref|ZP_07267065.1| deoxynucleoside kinase [Lactobacillus iners AB-1]
 gi|309804099|ref|ZP_07698180.1| deoxyadenosine kinase [Lactobacillus iners LactinV 11V1-d]
 gi|309804861|ref|ZP_07698923.1| deoxyadenosine kinase [Lactobacillus iners LactinV 09V1-c]
 gi|312871308|ref|ZP_07731406.1| deoxyadenosine kinase [Lactobacillus iners LEAF 3008A-a]
 gi|312873547|ref|ZP_07733596.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2052A-d]
 gi|312874882|ref|ZP_07734901.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2053A-b]
 gi|315654170|ref|ZP_07907086.1| deoxyadenosine kinase [Lactobacillus iners ATCC 55195]
 gi|325913653|ref|ZP_08176015.1| deoxyadenosine kinase [Lactobacillus iners UPII 60-B]
 gi|329919778|ref|ZP_08276729.1| deoxyadenosine kinase [Lactobacillus iners SPIN 1401G]
 gi|259167430|gb|EEW51925.1| deoxyadenosine kinase [Lactobacillus iners DSM 13335]
 gi|308163867|gb|EFO66133.1| deoxyadenosine kinase [Lactobacillus iners LactinV 11V1-d]
 gi|308165800|gb|EFO68021.1| deoxyadenosine kinase [Lactobacillus iners LactinV 09V1-c]
 gi|311089627|gb|EFQ48052.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2053A-b]
 gi|311090943|gb|EFQ49338.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2052A-d]
 gi|311093322|gb|EFQ51668.1| deoxyadenosine kinase [Lactobacillus iners LEAF 3008A-a]
 gi|315488866|gb|EFU78512.1| deoxyadenosine kinase [Lactobacillus iners ATCC 55195]
 gi|325477012|gb|EGC80162.1| deoxyadenosine kinase [Lactobacillus iners UPII 60-B]
 gi|328937125|gb|EGG33553.1| deoxyadenosine kinase [Lactobacillus iners SPIN 1401G]
          Length = 214

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++   +L   L  +           G P        +L     +     
Sbjct: 4   IVLSGPIGAGKSSLTKILADELHGQ----AFYENVDGNP--------ILPLFYKDMSKYT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120
              +     ++H    I  A      ++ D   + DS +       G  DS++      L
Sbjct: 52  --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108

Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
               +++V       PD  I +   +D  LK ++ R  + E    D
Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154


>gi|145247871|ref|XP_001396184.1| uridylate kinase [Aspergillus niger CBS 513.88]
 gi|134080929|emb|CAK41445.1| unnamed protein product [Aspergillus niger]
          Length = 212

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 64/223 (28%), Gaps = 58/223 (26%)

Query: 6   FISFEGIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59
           FI   G  G+GK T  S L R      L   +       RE  G+   +  +  +    +
Sbjct: 16  FIL--GGPGSGKGTQSSNLVRDYGFTHLSAGDLLRAEQVRE--GSQYGDLIKTYIREGKI 71

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118
                   A++  A         +  AL  GK              Q E        +D 
Sbjct: 72  VPM-EITVALLSNA---------MADALASGKK-------------QQEGGPKPRFLIDG 108

Query: 119 ---SLQE--ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               L +       V P + T+ LD P ++   R+  R              +D    E 
Sbjct: 109 FPRKLDQAVFFEDTVCPSEMTLFLDCPEEVMETRLLKRGETSG---------RDDDNAES 159

Query: 173 RRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILN 206
            R+ F               + ++   V +  S + V   I  
Sbjct: 160 IRKRFRTFVETSMPVVKAFEEQNKVVSVTATGSVEEVYERIRE 202


>gi|126697068|ref|YP_001091954.1| adenylate kinase [Prochlorococcus marinus str. MIT 9301]
 gi|166980345|sp|A3PF28|KAD_PROM0 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|126544111|gb|ABO18353.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9301]
          Length = 182

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 47/211 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  GAGK T   L+ +     +Y    T E             LL   ++   A  
Sbjct: 5   ILFLGAPGAGKGTQAELISQ---SNSYLHLSTGE-------------LLRKEIEMNTALG 48

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL------LCDRFLDSSYAYQGERDSSQHLFLDS- 119
             +     R + V + +   ++   ++      + D +          R+ SQ   L+  
Sbjct: 49  IQVKDIMNRGELVSDELVLKIVRQNLVKDNKGWILDGY---------PRNLSQANSLNEV 99

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR----RQ 175
           L EI+      +    LD+P ++ +KR+  R    ++          V I++K      Q
Sbjct: 100 LNEINQPL---ELVFYLDIPEEVLIKRLLLRGRKDDTEETIR---TRVDIYKKTTEPLIQ 153

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
            F D++         +D+    ++++++I  
Sbjct: 154 YFKDLSL-----IEYIDADRDLKTISSDIKQ 179


>gi|300709656|ref|YP_003735470.1| signal recognition particle-docking protein FtsY [Halalkalicoccus
           jeotgali B3]
 gi|299123339|gb|ADJ13678.1| signal recognition particle-docking protein FtsY [Halalkalicoccus
           jeotgali B3]
          Length = 397

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 23/156 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67
           F G+ G GKTT I+ L ++L+ + Y   +         A E  R    +        E  
Sbjct: 206 FTGVNGVGKTTSIAKLSQYLEERGYSTVLANGDTYRAGANEQIREHARNLDTKLISHEQ- 264

Query: 68  AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--S 124
                      + + +  A   G  ++L D            R  +    +D L++I   
Sbjct: 265 ----GGDPAAVIYDAVEYAQAHGIDVVLGD---------TAGRLHTNEGLMDQLEKIDRV 311

Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158
           V    PD T+  D  +     ++R +      E   
Sbjct: 312 VG---PDMTLFTDEAVAGQDAVQRAKKFNDAAEIDG 344


>gi|198284666|ref|YP_002220987.1| sulfate adenylyltransferase large subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198249187|gb|ACH84780.1| sulfate adenylyltransferase, large subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 614

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +LL++ L  + +  +                 +L       G   + 
Sbjct: 445 FTGLSGSGKSTLANLLEKRLHAQGHHTY-----------------VLDGDNVRHGLNRDL 487

Query: 69  IVFAAARLD---HVENVIRPALMEGKILL 94
               A R +    V  V R  +  G I+L
Sbjct: 488 GFAEADRAENIRRVAEVARLMVDAGLIVL 516


>gi|195398863|ref|XP_002058040.1| GJ15862 [Drosophila virilis]
 gi|194150464|gb|EDW66148.1| GJ15862 [Drosophila virilis]
          Length = 299

 Score = 42.7 bits (100), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 11/90 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I   G+  +GK+T    L+ +   +   VH+  E    P A   ++        E    +
Sbjct: 4  IVISGLPASGKSTRAHQLQEYFVARGKKVHLISENVAVPKALFEKNAFFGDSQKEKVVRS 63

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96
          + +   A+R           L +  +++ D
Sbjct: 64 D-LKSEASR----------QLNKQDVIILD 82


>gi|323135547|ref|ZP_08070630.1| sulfate adenylyltransferase, large subunit [Methylocystis sp. ATCC
           49242]
 gi|322398638|gb|EFY01157.1| sulfate adenylyltransferase, large subunit [Methylocystis sp. ATCC
           49242]
          Length = 631

 Score = 42.7 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L++  L  +                  A  ++L       G   + 
Sbjct: 462 FTGLSGAGKSTVANLVETKLVER-----------------HAHTIMLDGDNIRHGLNKDL 504

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +  +  G I+LC        A+     + + +    +++   
Sbjct: 505 GFTDADRVENIRRIGEVAKLMVDAGLIVLC--------AFISPFKAERRMVRSLVED--- 553

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E      I LD P+++ + R
Sbjct: 554 GEF---IEIFLDTPLEVCIAR 571


>gi|146327006|gb|AAI41803.1| CMPK2 protein [Homo sapiens]
          Length = 409

 Score = 42.7 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 59/186 (31%), Gaps = 37/186 (19%)

Query: 1   MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +  G F  ++ EG++  GKTT    +   L+     V +   P      +  R +     
Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DD 297

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH---- 114
                  A    ++         + + +      ++ DR+  S+  Y    + S      
Sbjct: 298 EPTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHL 352

Query: 115 --------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                    + + L +  +  ++        +  +  L+R+Q R   +     +  E   
Sbjct: 353 PPAHHPVYQWPEDLLKPDLILLL-------TVSPEERLQRLQGRGMEKTREEAE-LEANS 404

Query: 167 VMIHEK 172
           V   +K
Sbjct: 405 V-FRQK 409


>gi|222055455|ref|YP_002537817.1| cytidylate kinase [Geobacter sp. FRC-32]
 gi|221564744|gb|ACM20716.1| cytidylate kinase [Geobacter sp. FRC-32]
          Length = 247

 Score = 42.7 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
           +GL I+ +G  GAGK+T   LL   L
Sbjct: 10 KNGLIIAIDGPSGAGKSTITKLLAERL 36


>gi|324508635|gb|ADY43642.1| Molybdopterin synthase catalytic subunit [Ascaris suum]
          Length = 350

 Score = 42.7 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 31/195 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I   G   AGKTT    + + L+ K     +  +       E  R +       E 
Sbjct: 16  KGTIIGIAGCTNAGKTTIARSILQKLRDKKQTATIVSQDDFFHNRELVRCI-----SKES 70

Query: 63  GAEAEAIVF----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                   +    A      VE ++  A+    +++               + +    L 
Sbjct: 71  DPSIRFCNYDSPDAIDERRFVEAILNAAVTHDNVVV---------------EGNMLTELP 115

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           S+  +  +       + L L  +  L+R   R          YF++     +++     L
Sbjct: 116 SVYNLISR------ILFLTLDRETCLERRLQRSDYDPPDEPGYFDQVVWPAYQRHLSNAL 169

Query: 179 DIARNQPDRCHIVDS 193
            + R + DR   VD+
Sbjct: 170 KLIR-ESDRLTFVDA 183


>gi|311068881|ref|YP_003973804.1| deoxyguanosIne kinase [Bacillus atrophaeus 1942]
 gi|310869398|gb|ADP32873.1| deoxyguanosIne kinase [Bacillus atrophaeus 1942]
          Length = 218

 Score = 42.7 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 47/232 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GK++   +L   L  +             P       +  +   +E  A+ 
Sbjct: 4   IVVGGMIGLGKSSVSKILGEALDSE----VFYESVDDNPILP----LFYTASEEEIQAKR 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGERDS 111
              +     LD     I+ AL   K +L DR +                S+  +Q   + 
Sbjct: 56  YPFLLQLHFLDTRFKSIKEALGSNKNVL-DRSIYEDWYFAKVNKDLGRISALEFQVYENL 114

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--VMI 169
             +  ++ L E+  +   PD  I L    +  L R+  R           FE+    +  
Sbjct: 115 LNN-MMEELDELPKKA--PDLMIYLKSSFETVLYRIGLRGRD--------FEQDTSLIDY 163

Query: 170 HEKRRQIFLDIARNQP----------DRCHIVDSAHSFQSVATNILNIVWEL 211
           ++   + + +   N            DR  +V++    + V   +   + E+
Sbjct: 164 YKTLWEGYDEWLFNHYKASQVLVVDMDRLDVVNNPEDAEQVVQEVKQTLNEM 215


>gi|146276293|ref|YP_001166452.1| putative fructose transport system kinase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145554534|gb|ABP69147.1| fructokinase [Rhodobacter sphaeroides ATCC 17025]
          Length = 198

 Score = 42.7 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 42/155 (27%), Gaps = 17/155 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T    L   L      V +                L  C       +    +
Sbjct: 26  GPPGAGKSTLAEALVAALGADARLVPMDGFHFDDRV--LVARGLAHCKGAPETFDVRGFL 83

Query: 71  FAAARLDHVENVIRPALME-------GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               RL     +  P           G  ++ D   D     +G            L+  
Sbjct: 84  NLMERLRAGGEIAIPVFDRAMELARAGADVVTD--DDRILVVEGNYLLLDEEPWRRLRGF 141

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                  D T+ LD+P     +R+  R++ R    
Sbjct: 142 F------DLTLFLDVPEAELERRLLARWATRPGGA 170


>gi|302850696|ref|XP_002956874.1| adenylate kinase [Volvox carteri f. nagariensis]
 gi|300257755|gb|EFJ41999.1| adenylate kinase [Volvox carteri f. nagariensis]
          Length = 265

 Score = 42.7 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 20/115 (17%)

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERKDV 167
           + I  + + PD  +++ +P ++ ++RV  R     +  +                +++  
Sbjct: 131 EAIEKEGIRPDLFLLIQVPDELLVERVVGRRLDPMTGAIYHLKYNPPPPEIVGRLQQRSD 190

Query: 168 MIHEKRR-------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              EK R            +     D    +D   S  +V  +I   + E++ K+
Sbjct: 191 DTEEKCRVRVDTHNANVGAVVGYYTDVMKEIDGTKSMDAVFQDISAALDEVITKK 245


>gi|292656617|ref|YP_003536514.1| adenylate kinase [Haloferax volcanii DS2]
 gi|291372675|gb|ADE04902.1| Adenylate kinase [Haloferax volcanii DS2]
          Length = 208

 Score = 42.7 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 65/233 (27%), Gaps = 57/233 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    L         +   T         +A R        +     +
Sbjct: 5   ILLLGAPGAGKGTQSKRLAETY---GVEHVTT--------GDALRAN-KDMETEYGTPRS 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                       V  ++  AL +      D ++   Y     R+ SQ  +L  + ++   
Sbjct: 53  FMEKGELVPDAVVNEIVEAALED-----ADGYVLDGY----PRNLSQAEYLTEITDL--- 100

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLD----YFERKDVM 168
               D  I L++     ++R+  R                  E    D       ++D  
Sbjct: 101 ----DAVIYLNVAESELVERLTGRRVCDDCGTNFHVKFNQPEEEGVCDDCGGELVQRDDD 156

Query: 169 IHEKRRQIFLDIARNQPDRC----------HIVDSAHSFQSVATNILNIVWEL 211
             E  R+  L +     +              VD   +   V  +I ++V + 
Sbjct: 157 TEETVRER-LSVFEENTEPVIEHYRDEGVLVEVDGEQTPDEVFEDIQSVVDDA 208


>gi|251797750|ref|YP_003012481.1| guanylate kinase [Paenibacillus sp. JDR-2]
 gi|247545376|gb|ACT02395.1| guanylate kinase [Paenibacillus sp. JDR-2]
          Length = 205

 Score = 42.7 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M+ GL I   G  G GK T  S+L++ +    Y V   TR+P                  
Sbjct: 1  MDKGLLIVLSGPSGVGKGTVCSVLRQKVPELVYSVSATTRKPRQGEIDGINYFFKTKEQF 60

Query: 60 DEFGAEAEAIVFAAARLDHVENV----------IRPALMEGKILL 94
           E  A+   +       +H E V          +   L  GK ++
Sbjct: 61 KEMIAKDALL-------EHAEYVGNCYGTPRDFVESTLASGKDVI 98


>gi|269216975|ref|ZP_06160829.1| putative helix-turn-helix protein [Slackia exigua ATCC 700122]
 gi|269129782|gb|EEZ60866.1| putative helix-turn-helix protein [Slackia exigua ATCC 700122]
          Length = 563

 Score = 42.7 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 3/99 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G   AGKTT I +L   L+ + Y V    E          R  +       F    
Sbjct: 113 IAVTGGPCAGKTTAIPVLAHELEVRGYRVVTLPEAATLLMETGMRPGI-DVSEGTFQERI 171

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             +  +  R   +   +  +     ++LCDR +    AY
Sbjct: 172 LDLQLSLERAARI--TLERSADCRAVVLCDRGIMDGAAY 208


>gi|256788905|ref|ZP_05527336.1| shikimate kinase [Streptomyces lividans TK24]
 gi|289772792|ref|ZP_06532170.1| shikimate kinase [Streptomyces lividans TK24]
 gi|289702991|gb|EFD70420.1| shikimate kinase [Streptomyces lividans TK24]
          Length = 171

 Score = 42.7 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 58/204 (28%), Gaps = 41/204 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  G GK+T   LL   L     D   T E   T    A   + +  G       
Sbjct: 5   LIVLVGPMGVGKSTVGQLLAERLGTGYRD---TDEDIVTAQGRAIAEIFVDEGE------ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                  AA     +  +R AL E + +L            G            L     
Sbjct: 56  -------AAFRTLEKEAVRTALAEHEGVLA----------LGGGAILDADTRALLAG--- 95

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                   + L + V+  +KR     +    A      ++   + E RR ++ D+A    
Sbjct: 96  -----QRVVYLSMDVEEAVKRTGLNAARPLLAVNPR--KQWRELMEARRHLYEDVATA-- 146

Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209
                 D   + + V    L  V 
Sbjct: 147 --VVATDG-RTPEEVTQAALEAVE 167


>gi|167387035|ref|XP_001737996.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165898958|gb|EDR25682.1| hypothetical protein EDI_138600 [Entamoeba dispar SAW760]
          Length = 215

 Score = 42.7 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 14/110 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI   G  G GK+T I  LKR L +K       +E      +   +  +L   +   G+ 
Sbjct: 6   FIVITGGVGVGKSTLIHNLKRSLPKKER--IFIKEYIDFKPSTGKK--MLEETLKGKGSM 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGER 109
            E  +F    +D  +  +  A    K ++ +R      F+ S+ AY   R
Sbjct: 62  YELQLFI---IDCFKEQLEKAKQM-KYVIMERSPIDSIFIFSNEAYFQGR 107


>gi|218666793|ref|YP_002427338.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218519006|gb|ACK79592.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 604

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +LL++ L  + +  +                 +L       G   + 
Sbjct: 445 FTGLSGSGKSTLANLLEKRLHAQGHHTY-----------------VLDGDNVRHGLNRDL 487

Query: 69  IVFAAARLD---HVENVIRPALMEGKILL 94
               A R +    V  V R  +  G I+L
Sbjct: 488 GFAEADRAENIRRVAEVARLMVDAGLIVL 516


>gi|110803550|ref|YP_699034.1| guanylate kinase [Clostridium perfringens SM101]
 gi|119371206|sp|Q0SS73|KGUA_CLOPS RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|110684051|gb|ABG87421.1| guanylate kinase [Clostridium perfringens SM101]
          Length = 216

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          V   TR P          H L      
Sbjct: 9   NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRNPRVGEVDGVNYHFLTKEEFK 68

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +  AE + +       +H E          + +   L EGK ++                
Sbjct: 69  QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 106

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
                    ++E +          I  LP   +   +R+  R S    + +  F+     
Sbjct: 107 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 157

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200
                   + +I         +V     D+    +++
Sbjct: 158 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 187


>gi|71416210|ref|XP_810144.1| adenylate kinase [Trypanosoma cruzi strain CL Brener]
 gi|70874634|gb|EAN88293.1| adenylate kinase, putative [Trypanosoma cruzi]
          Length = 260

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 73/233 (31%), Gaps = 57/233 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T    +          V          + +  R  +      E G  A
Sbjct: 52  IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98

Query: 67  EAIVFAAARLDH--VENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E+ +     + +  V N +R  L +  +     L D F  S                D  
Sbjct: 99  ESFIHNGEMVPNKIVINAVRKRLEQDDVKERGWLLDGFPRSQ---------------DQA 143

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYFER 164
           + +    ++P   ++L++P  I ++R++NR +   +  +                +   +
Sbjct: 144 EALETSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERLIQ 203

Query: 165 KDVMIHEKRRQI---FLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWE 210
           +D    E        + +  +   +        ++   S  +V   +L +V  
Sbjct: 204 RDDDHRETVEARLRVYHEKLQGLKEHYGTLVETINGDQSIHAVTEGVLAVVER 256


>gi|326800902|ref|YP_004318721.1| deoxyadenosine kinase [Sphingobacterium sp. 21]
 gi|326551666|gb|ADZ80051.1| Deoxyadenosine kinase [Sphingobacterium sp. 21]
          Length = 204

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 29/177 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL + L    ++     E    P  E          +  +    
Sbjct: 3   IAIVGNIGAGKTTLTGLLAKHL---GWEPQF-EEVEDNPYLED-----FYSDMKRWSFNL 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFL------- 117
           +   F  +R  H+  + +        ++ DR  + D   AY    +      +       
Sbjct: 54  QIF-FLNSRFRHIVELQK----RNANIIQDRTIYED---AYIFAENLHDMGLMTTRDFQN 105

Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171
             +  + I      PD  I L   V   +  +Q R    E+   LDY  + +    +
Sbjct: 106 YSNIFESIVSFIKAPDLLIYLKASVPTLVDNIQLRGRDYEAGIRLDYLSKLNDKYQK 162


>gi|302346424|ref|YP_003814722.1| hypothetical protein HMPREF0659_A6678 [Prevotella melaninogenica
           ATCC 25845]
 gi|302150521|gb|ADK96782.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 357

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V +  E     +     ++  +    
Sbjct: 1   MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNAAFF 57

Query: 61  EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A  E  +    +   +   I     +  I++CDR      AY 
Sbjct: 58  YEGEKATLEVQLALEDKFTRMAETI----DKPTIIVCDRGTMDISAYM 101


>gi|227879106|ref|ZP_03996993.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
 gi|293380139|ref|ZP_06626225.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
 gi|227861300|gb|EEJ68932.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
 gi|290923295|gb|EFE00212.1| conserved hypothetical protein [Lactobacillus crispatus 214-1]
          Length = 167

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 43/152 (28%), Gaps = 32/152 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I   G  G+GKTT    + R L      +     P  T   E     +      
Sbjct: 1   MMTSKLIIIRGNSGSGKTTLSKEIHRRLPHNTLLI-----PQDTVRREMLN--VKDGEKT 53

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++       H    I   ++  K             Y      SQ LF D +
Sbjct: 54  FALPLLENLLEYGYH--HCSYTILEGILNAKW------------YADLFKKSQQLFGDQI 99

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
                           D+P +  +KR + R+ 
Sbjct: 100 YAY-----------YFDIPFEETMKRHKTRHE 120


>gi|53794025|gb|AAU93603.1| cytoplasmic dynein heavy chain 2.2 [Leishmania mexicana]
          Length = 4470

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T +S+L++ LQ    +V      P         R  LL     +    
Sbjct: 2119 VVLVGPSGSGKSTLLSILRKALQTMQIEVPMHVMNP-----KAMTRRCLLGYMDADTREW 2173

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++ AAAR     +V++        +LCD                   +++SL  +
Sbjct: 2174 HDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2213


>gi|21219996|ref|NP_625775.1| shikimate kinase [Streptomyces coelicolor A3(2)]
 gi|81545697|sp|Q9KXQ5|AROK_STRCO RecName: Full=Shikimate kinase; Short=SK
 gi|8249954|emb|CAB93375.1| shikimate kinase I [Streptomyces coelicolor A3(2)]
          Length = 171

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 59/204 (28%), Gaps = 41/204 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  G GK+T   LL   L     D   T E   T    A   + +  G       
Sbjct: 5   LIVLVGPMGVGKSTVGQLLAERLGTGYRD---TDEDIVTAQGRAIAEIFVDEGE------ 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                  AA     +  +R AL E + +L            G            L     
Sbjct: 56  -------AAFRTLEKEAVRTALAEHEGVLA----------LGGGAILDADTRALLAG--- 95

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                   + L + V+  +KR     +    A      ++   + E RR ++ D+A    
Sbjct: 96  -----QRVVYLSMDVEEAVKRTGLNAARPLLAVNPR--KQWRELMEARRHLYEDVATA-- 146

Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209
                 D   + + V    L+ V 
Sbjct: 147 --VVATDG-RTPEEVTQAALDAVE 167


>gi|328866135|gb|EGG14521.1| adenylate kinase [Dictyostelium fasciculatum]
          Length = 271

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 42/163 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GK T  + ++   +        T         +  R V       +     
Sbjct: 60  IALVGAPGSGKGTQSAKME---RDFGLKPIST--------GQILRQV-----ASDVSP-- 101

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY----------AYQGERDSSQHLF 116
                       +   I+  L  GK++  D F+               Y  +        
Sbjct: 102 ------------LGKEIKAILDSGKLV-SDEFMLKVMQEYLGKMKEQGYLLDGYPRTTKQ 148

Query: 117 LDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESAC 158
            + L +   +  MP D  + LD+P ++ + R+Q+R+    S  
Sbjct: 149 AEDLDKWLEERKMPLDFVLYLDVPEEVLMDRIQDRWIHPSSGR 191


>gi|322492990|emb|CBZ28275.1| putative dynein heavy chain [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 4470

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T +S+L++ LQ    +V      P         R  LL     +    
Sbjct: 2119 VVLVGPSGSGKSTLLSILRKALQTMQIEVPMHVMNP-----KAMTRRCLLGYMDADTREW 2173

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++ AAAR     +V++        +LCD                   +++SL  +
Sbjct: 2174 HDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2213


>gi|317401461|gb|EFV82093.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Achromobacter xylosoxidans C54]
          Length = 625

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  + L+  L  +                   R  +L      
Sbjct: 446 HRGKVIWFTGLSGSGKSTLANALEIALFERGR-----------------RTYILDGDNVR 488

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +     A R++++     V +  +  G I+L 
Sbjct: 489 QGLNRDLGFTEADRVENIRRIAEVAKLMMDAGLIVLT 525


>gi|156717410|ref|NP_001096245.1| hypothetical protein LOC100124802 [Xenopus (Silurana) tropicalis]
 gi|134025411|gb|AAI35392.1| LOC100124802 protein [Xenopus (Silurana) tropicalis]
          Length = 361

 Score = 42.7 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 12/102 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVL 54
            I   G+ G+GKTT +  L  +L  KN           VH    P      +    + V+
Sbjct: 12  LIVL-GMAGSGKTTFVQRLAAYLHGKNSPPYVINLDPAVHEIPFPANIDIRDTVNYKEVM 70

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   G    ++   A R D V   I       + +L D
Sbjct: 71  KQYTLGPNGGIVTSLNLFATRFDQVVKFIEKRQQNCRYVLID 112


>gi|328848518|gb|EGF97729.1| hypothetical protein MELLADRAFT_84506 [Melampsora larici-populina
           98AG31]
 gi|328856009|gb|EGG05132.1| hypothetical protein MELLADRAFT_36977 [Melampsora larici-populina
           98AG31]
          Length = 198

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 32/148 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +GL I F G+ G+GK+T  + L+  L + N                  R  +L      
Sbjct: 22  QTGLTIWFTGLSGSGKSTLSTKLEEILLKSNK-----------------RAFVLDGDNIR 64

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G  ++       R +++     V +     G I+L         A+           + 
Sbjct: 65  KGLNSDLGFTNQDRKENIRRISEVSKLFNQSGIIVL--------VAFISPF-IDDRRLVR 115

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            L +I+         I LD  ++    R
Sbjct: 116 ELHQINELNF---LEIYLDSSLEALENR 140


>gi|197106198|ref|YP_002131575.1| hypothetical protein PHZ_c2737 [Phenylobacterium zucineum HLK1]
 gi|196479618|gb|ACG79146.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 494

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 57/189 (30%), Gaps = 34/189 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T        L      V +          E  + +L +        EA    
Sbjct: 328 GLSGSGKSTFARAAAPQLGASPGAVIL-------RTDEIRKRLLGAPPTQAMPPEAYTPE 380

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           F A   D +       L  G+ ++ D                        + ++V+  +P
Sbjct: 381 FYARTYDAMIADAGAMLKAGRAVVLD------------ATFIDPALRSRAERLAVECGVP 428

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR-CH 189
              I LD P  +   RV  R      A ++              +  L+  R  P+    
Sbjct: 429 FEGIWLDAPAQVLETRVAGRTGDASDATVE------------VLRGQLE--RLDPNIGWR 474

Query: 190 IVDSAHSFQ 198
            +D++ +  
Sbjct: 475 RIDASGAPD 483


>gi|297667950|ref|XP_002812258.1| PREDICTED: GPN-loop GTPase 1-like [Pongo abelii]
          Length = 391

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 40  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 99

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 100 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 136


>gi|223005897|ref|NP_009197.2| GPN-loop GTPase 1 isoform a [Homo sapiens]
 gi|194385160|dbj|BAG60986.1| unnamed protein product [Homo sapiens]
          Length = 388

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 40  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 99

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 100 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 136


>gi|119620962|gb|EAX00557.1| XPA binding protein 1, GTPase, isoform CRA_a [Homo sapiens]
          Length = 338

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|90075320|dbj|BAE87340.1| unnamed protein product [Macaca fascicularis]
          Length = 388

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 40  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 99

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 100 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 136


>gi|114576682|ref|XP_001159080.1| PREDICTED: similar to XPA binding protein 1 isoform 1 [Pan
           troglodytes]
          Length = 338

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|114576680|ref|XP_525723.2| PREDICTED: similar to XPA binding protein 1 isoform 2 [Pan
           troglodytes]
          Length = 374

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|3646130|emb|CAA09376.1| ATP(GTP)-binding protein [Homo sapiens]
          Length = 358

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 10  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 69

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 70  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 106


>gi|34925430|sp|Q9HCN4|GPN1_HUMAN RecName: Full=GPN-loop GTPase 1; AltName: Full=MBD2-interacting
           protein; Short=MBDin; AltName: Full=XPA-binding protein
           1
 gi|11094141|dbj|BAB17612.1| XPA binding protein 1 [Homo sapiens]
 gi|13938599|gb|AAH07451.1| GPN-loop GTPase 1 [Homo sapiens]
 gi|62702275|gb|AAX93201.1| unknown [Homo sapiens]
 gi|119620963|gb|EAX00558.1| XPA binding protein 1, GTPase, isoform CRA_b [Homo sapiens]
 gi|123993209|gb|ABM84206.1| XPA binding protein 1, GTPase [synthetic construct]
 gi|124000203|gb|ABM87610.1| XPA binding protein 1, GTPase [synthetic construct]
 gi|189066579|dbj|BAG35829.1| unnamed protein product [Homo sapiens]
          Length = 374

 Score = 42.7 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|302857486|ref|XP_002959884.1| hypothetical protein VOLCADRAFT_108787 [Volvox carteri f.
           nagariensis]
 gi|300254034|gb|EFJ39051.1| hypothetical protein VOLCADRAFT_108787 [Volvox carteri f.
           nagariensis]
          Length = 841

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 46/212 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65
           G  G+GK T    +K+     +Y            A +  R  + S  V     +E   E
Sbjct: 559 GGPGSGKGTQCDKIKQ-----DYKCVHLS------AGDLLRAEVKSGSVVGKKCEELMRE 607

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + + FA       + +I      GK  L D F                  LD  ++   
Sbjct: 608 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFES 649

Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179
             +MP    +  D P +   KR+  R     R     +   ++     E+    +  +L 
Sbjct: 650 N-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQSLPVKDHYLA 708

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                  +CH++ +  S + V   +  ++  L
Sbjct: 709 Q-----GKCHVISAVPSPEEVYGKVKAVLTSL 735



 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 73/224 (32%), Gaps = 50/224 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65
           G  G+GK T      + LQ   Y+           A +  R  + S  V     +E   E
Sbjct: 354 GGPGSGKGTQC---AQILQE--YECVHLS------AGDLLRAEVKSGSVVGRKCEELMRE 402

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + + FA       + +I      GK  L D F                  LD  ++   
Sbjct: 403 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFE- 443

Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179
             +MP    +  D P +   KR+  R     R     +   ++     E+    +  +L 
Sbjct: 444 GNIMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFHTFLEQSLPVKDHYLA 503

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
                  +CHI+ +      V      +V E++ K  SP   ++
Sbjct: 504 Q-----GKCHIISAVPPPGEVFE----VVKEVLDKLHSPRKPQE 538



 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 12/101 (11%)

Query: 117 LDSLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172
           LD  ++     +MP    +  D P +   KR+  R     R     +   ++     E+ 
Sbjct: 37  LDQAEQFESN-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQS 95

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +  +L        +CH++ +  S + V   +  ++  L
Sbjct: 96  LPVKDHYLAQ-----GKCHVISAVPSPEEVYGKVKAVLTSL 131



 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 72/225 (32%), Gaps = 46/225 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65
           G  G+GK T      + L+   Y+           A +  R  + S  V     +E   E
Sbjct: 157 GGPGSGKGTQC---AQILEE--YECVHLS------AGDLLRAEVKSGSVVGRKCEELMRE 205

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + + FA       + +I      GK  L D F                  LD  ++   
Sbjct: 206 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFES 247

Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179
             +MP    +  D P +   KR+  R     R     +   ++     E+    +  +L 
Sbjct: 248 N-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFHTFLEQSLPVKDHYLA 306

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
                  +CHI+ +      V   +  ++  +   R S  S  +D
Sbjct: 307 Q-----GKCHIISAVPPPGEVFEVVKKVLDGISAPRKSDGSLPED 346


>gi|284162433|ref|YP_003401056.1| adenylate kinase [Archaeoglobus profundus DSM 5631]
 gi|284012430|gb|ADB58383.1| adenylate kinase [Archaeoglobus profundus DSM 5631]
          Length = 217

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 27/110 (24%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACL-----------DYFERKDVMIHEK------- 172
           D  I +D+P +  +KR+  R + R    +           +  ++    ++++       
Sbjct: 108 DAVIYIDVPEEEVVKRITYRRTCRNCGAVYHLIYAPPKEDNKCDKCGGELYQRDDDKEDV 167

Query: 173 RRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            RQ F               +    + VD   S   V   I  I+ ++ +
Sbjct: 168 VRQRFKVYMENTAPLIEYYEKKGILYRVDGTKSIDEVFAQIDEILQKIAK 217


>gi|258647259|ref|ZP_05734728.1| uridine kinase [Prevotella tannerae ATCC 51259]
 gi|260852908|gb|EEX72777.1| uridine kinase [Prevotella tannerae ATCC 51259]
          Length = 207

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 5/154 (3%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  G+GK+T +  +   L  +   V              +   L     D   A
Sbjct: 1   MIIGIAGGTGSGKSTVVRKIIAQLPAEQVSVLPQDSYYKRAPKGYSIEDLRKMNYDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               ++    R    E  IR  +    +L CDR  ++               + +L    
Sbjct: 61  FDWELLEEHVRELRAERAIRQPVYS--VLTCDRCEETILV--KPSKVIIIEGIMALYRKE 116

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           ++++M D  I +D   D  L RV NR  +     
Sbjct: 117 LRDMM-DLRIYVDADPDERLIRVINRDVVERGRT 149


>gi|188591963|ref|YP_001796561.1| hypothetical protein RALTA_B0120 [Cupriavidus taiwanensis LMG
          19424]
 gi|170938337|emb|CAP63322.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG
          19424]
          Length = 196

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 4/79 (5%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +  EGI G+GK+T + L+ ++LQ          E        A     L    + +  
Sbjct: 17 RLVIVEGIMGSGKSTTMRLIAKYLQEAGQPALPVHERTEPHPVRATDE--LEHWFEPWRD 74

Query: 65 EAEAIVF--AAARLDHVEN 81
               +   A AR      
Sbjct: 75 ATPQHLADRALARWQAFVE 93


>gi|110643223|ref|YP_670953.1| ATP-binding protein YghR [Escherichia coli 536]
 gi|170681881|ref|YP_001745249.1| hypothetical protein EcSMS35_3269 [Escherichia coli SMS-3-5]
 gi|218706611|ref|YP_002414130.1| hypothetical protein ECUMN_3468 [Escherichia coli UMN026]
 gi|293406601|ref|ZP_06650527.1| predicted protein [Escherichia coli FVEC1412]
 gi|298382340|ref|ZP_06991937.1| ATP-binding protein yghR [Escherichia coli FVEC1302]
 gi|300900321|ref|ZP_07118500.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|301017321|ref|ZP_07182085.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|331684629|ref|ZP_08385221.1| hypothetical ATP-binding protein YghR [Escherichia coli H299]
 gi|110344815|gb|ABG71052.1| hypothetical ATP-binding protein YghR [Escherichia coli 536]
 gi|170519599|gb|ACB17777.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
 gi|218433708|emb|CAR14625.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli UMN026]
 gi|291426607|gb|EFE99639.1| predicted protein [Escherichia coli FVEC1412]
 gi|298277480|gb|EFI18996.1| ATP-binding protein yghR [Escherichia coli FVEC1302]
 gi|300356211|gb|EFJ72081.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300400294|gb|EFJ83832.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|331078244|gb|EGI49450.1| hypothetical ATP-binding protein YghR [Escherichia coli H299]
          Length = 252

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193


>gi|238797394|ref|ZP_04640894.1| LAO/AO transport system kinase [Yersinia mollaretii ATCC 43969]
 gi|238718825|gb|EEQ10641.1| LAO/AO transport system kinase [Yersinia mollaretii ATCC 43969]
          Length = 318

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 6/90 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK+T +  L + L  + + V  +  +P     GG+   +  R + LS     F  
Sbjct: 48  GTPGAGKSTFLEALGQELLAQGHKVAVIAVDPSSPISGGSILGDKTRMLNLSRAEQAFIR 107

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILL 94
              +         H   +I      G  ++
Sbjct: 108 PVPSGGHLGGISQHTRELILLCEAAGYDVI 137


>gi|260592151|ref|ZP_05857609.1| hypothetical protein HMPREF0973_01590 [Prevotella veroralis F0319]
 gi|260535785|gb|EEX18402.1| hypothetical protein HMPREF0973_01590 [Prevotella veroralis F0319]
          Length = 357

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 5/106 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V +  E     +     ++  +    
Sbjct: 1   MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNHAFF 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A   +  A  L+     I   +    I++CDR      AY 
Sbjct: 58  YEGEKATLEMQLA--LEDKFTRIAETITTPTIIVCDRGTMDISAYM 101


>gi|229170281|ref|ZP_04297960.1| uridine kinase [Bacillus cereus AH621]
 gi|228613204|gb|EEK70350.1| uridine kinase [Bacillus cereus AH621]
          Length = 189

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 17/88 (19%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183
           D TI +D P+DI + R   R         D+ E     IH          R+ +L+    
Sbjct: 104 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 154

Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+   ++D + S   +   I+  +  
Sbjct: 155 VKPNSDIVLDGSLSISEIIGQIIEELNR 182


>gi|116207038|ref|XP_001229328.1| hypothetical protein CHGG_02812 [Chaetomium globosum CBS 148.51]
 gi|88183409|gb|EAQ90877.1| hypothetical protein CHGG_02812 [Chaetomium globosum CBS 148.51]
          Length = 192

 Score = 42.7 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 58/205 (28%), Gaps = 53/205 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GK+T    +   L       H     G                 +     A   +
Sbjct: 21  GPAGCGKSTVAKHIADSL-------HFPFIEGDEY----------HPKANIDKMSAGIPL 63

Query: 71  FAAARLD---HVENVIRPALMEG--KILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEI 123
             A R D    +       L +G   ++L      S+    Y+     + +   +     
Sbjct: 64  TDADRWDWLTALREASIHELDKGSDGVVL----TCSALKRKYRDVIRVAPYFTPNVHLHF 119

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                     I LD P ++ L+RV  R +    A +                 F  + R 
Sbjct: 120 ----------IYLDAPEEVLLQRVSARKNHYMGANM-------------VHSQFEVLERP 156

Query: 184 QPDRC--HIVDSAHSFQSVATNILN 206
            PD      +D   S ++V  + L+
Sbjct: 157 TPDEIDVITIDVTQSQEAVKADALD 181


>gi|327403040|ref|YP_004343878.1| Deoxyadenosine kinase [Fluviicola taffensis DSM 16823]
 gi|327318548|gb|AEA43040.1| Deoxyadenosine kinase [Fluviicola taffensis DSM 16823]
          Length = 204

 Score = 42.7 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 62/197 (31%), Gaps = 34/197 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT   +L +                 T   +   +  L+   ++    +
Sbjct: 3   IAVAGNIGSGKTTLTKMLAKH------------YNWETHYEDVEHNPYLNDFYEDMQRWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
             +   +  +R   ++ +          ++ DR  + D+                D    
Sbjct: 51  FNLQIYYLNSRFTQIQEI----KNSTTHVIQDRTIYEDAFIFAPNLHSMGLMTTRDFENY 106

Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            S+  +M      PD  I L   V   + ++Q R    E       E   +   ++  + 
Sbjct: 107 FSLFNLMDSFVSAPDLLIYLRASVPTLVNQIQQRGREYE-------ESIRLDYLKRLNER 159

Query: 177 FLD-IARNQPDRCHIVD 192
           +   I+     +  I+D
Sbjct: 160 YEAWISTYDNGKLLIID 176


>gi|317493498|ref|ZP_07951919.1| hypothetical protein HMPREF0864_02684 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918441|gb|EFV39779.1| hypothetical protein HMPREF0864_02684 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 237

 Score = 42.7 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 53/174 (30%), Gaps = 38/174 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---------LLSC 57
           I+  G +G+GK+T  + L   L  +                E    +          L  
Sbjct: 17  IAIVGCDGSGKSTLAANLVNNLASQIPTELFYLGQSSGRIGEWIGRLPIIGISFSRYLRA 76

Query: 58  GVDEFGAE--------AEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
             D                +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 77  KADCVHERPSAPPGNATTLVIYLLSYWRAYKFRKMLARS-QQGHLLITDRYPQVEVPGFR 135

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKR 146
            D     Q  + +  + ++ +L++  ++         P   I LD+       R
Sbjct: 136 FDGP---QLAKTAGGNWWVRTLRKRELKLYHWMASFQPLLLIRLDIDEQTAFSR 186


>gi|288802526|ref|ZP_06407965.1| conserved hypothetical protein [Prevotella melaninogenica D18]
 gi|288335054|gb|EFC73490.1| conserved hypothetical protein [Prevotella melaninogenica D18]
          Length = 357

 Score = 42.7 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G   AGKTT +  +        Y V +  E     +     ++  +    
Sbjct: 1   MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNAAFF 57

Query: 61  EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             G +A  E  +    +   +   I     +  I++CDR      AY 
Sbjct: 58  YEGEKATLEVQLALEDKFTRMAETI----DKPTIIVCDRGTMDISAYM 101


>gi|302556655|ref|ZP_07308997.1| daunorubicin resistance ATP-binding protein DrrA [Streptomyces
           griseoflavus Tu4000]
 gi|302474273|gb|EFL37366.1| daunorubicin resistance ATP-binding protein DrrA [Streptomyces
           griseoflavus Tu4000]
          Length = 328

 Score = 42.7 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 66/241 (27%)

Query: 7   ISFE----------GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEA 49
           ++FE          G  GAGKTT I +L   L       +   +DV           A A
Sbjct: 24  VTFEVRPGEVFGLLGPNGAGKTTVIRILTTILHPSAGRAEVLGHDVV--------REASA 75

Query: 50  ARHVL-LSCGVDEFGAEA---EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
            R ++ L+             E +             IRP        L DRF  ++ A 
Sbjct: 76  VRRLIGLAGQYAAVDPNLTGRENLRLIGRLSQSARARIRPRASA----LLDRFDLAAAAD 131

Query: 106 QGER--DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           +  R         LD    +  Q       + LD     GL   Q+R +L          
Sbjct: 132 RPVRTYSGGMRRRLDVAAALVAQPP----ILFLD-EPTTGLD-PQSRNALW--------- 176

Query: 164 RKDVMIHEKRRQI--------FLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWE 210
               +I E  R+         +L+ A    +R  +VD     +  +  ++  ++ N V E
Sbjct: 177 ---ALIRELVREGTTVLLTTQYLEEADQLAERVVVVDEGRVIADDTPAALKAHLGNTVIE 233

Query: 211 L 211
           L
Sbjct: 234 L 234


>gi|14521355|ref|NP_126831.1| cytidylate kinase [Pyrococcus abyssi GE5]
 gi|9910753|sp|Q9UZJ6|KCY_PYRAB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|5458573|emb|CAB50061.1| cmk cytidylate kinase [Pyrococcus abyssi GE5]
          Length = 181

 Score = 42.7 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 71/221 (32%), Gaps = 48/221 (21%)

Query: 1   MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G   I+  G+ G+G TT    L +      +            A    R +    G+
Sbjct: 1   MPKGCLVITVSGLAGSGTTTLCRNLAKHY---GFKHVY--------AGLIFRQMAKERGM 49

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                +  A +      + V+     A  E  +++             E   +  +  ++
Sbjct: 50  SLEEFQKYAELHPEIDRE-VDRRQVEAAKECNVVI-------------EGRLAGWMVKNA 95

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178
                      D  I LD P+ +  +RV  R  +          ER+      + R+ +L
Sbjct: 96  -----------DLKIWLDAPIRVRAERVAKREGISVEEAFMKIAERE-----MQNRKRYL 139

Query: 179 DIARNQPDRC----HIVDSAH-SFQSVATNILNIVWELVQK 214
           ++     +       I+D++  S + V   +   +  L +K
Sbjct: 140 NLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHLYEK 180


>gi|225850938|ref|YP_002731172.1| shikimate kinase [Persephonella marina EX-H1]
 gi|254806779|sp|C0QR76|AROK_PERMH RecName: Full=Shikimate kinase; Short=SK
 gi|225646155|gb|ACO04341.1| shikimate kinase [Persephonella marina EX-H1]
          Length = 164

 Score = 42.7 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 42/196 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK+T   LL   L    +      +       +  + +    G   F           
Sbjct: 11  GSGKSTVGKLLAEKL---GFRFVDIDQEIEKEEGKKIKDIFREKGESYF----------- 56

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
              D  + +I   L    +++            G    +    +  ++E           
Sbjct: 57  --RDLEKRMIERFLGSKNLVVST----------GGGLGADSENMRKMKENGT-------V 97

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           I LD P++   +R +      E   L    ++   + EKR++I+   A+       I   
Sbjct: 98  IWLDTPLETVFERCKG---DDERPLLKKNRKEIKELFEKRKKIY---AQAD---IRISTE 148

Query: 194 AHSFQSVATNILNIVW 209
             S   +   IL  + 
Sbjct: 149 GKSPYQIVNEILGRIR 164


>gi|302926112|ref|XP_003054229.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735170|gb|EEU48516.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 236

 Score = 42.7 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 58/213 (27%), Gaps = 53/213 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKTT    L   L     +      P      E  R+ +            +   
Sbjct: 63  GPAGCGKTTVAEYLANTLGMPYVEGDSYHPPAN---IEKMRNGI---------PLTD--- 107

Query: 71  FAAARLD---HVENVIRPALMEG--KILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEI 123
             A R D    +       L  G   ++L      S+    Y+     + +     L   
Sbjct: 108 --ADRWDWLTALREESIHRLNAGSSGVVL----TCSALKRKYRDVIRVAGYYDHRILIHF 161

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--LDIA 181
                     + LD   ++ L RVQ R +    A +                 F  L+  
Sbjct: 162 ----------VFLDAAEEVLLARVQQRQNHYMGANM-------------VHSQFDILERP 198

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +       +D + +   V    L  V E + K
Sbjct: 199 SSDEKDVITIDVSKTLDEVQQEALANVLETMTK 231


>gi|311252924|ref|XP_003125337.1| PREDICTED: GPN-loop GTPase 1-like, partial [Sus scrofa]
          Length = 389

 Score = 42.7 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 42  GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 101

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 102 GPNGGIVTSLNLFATRFDQVMKFIEKAQNTSKYVLID 138


>gi|215488310|ref|YP_002330741.1| conserved predicted protein with nucleoside triphosphate hydrolase
           domain [Escherichia coli O127:H6 str. E2348/69]
 gi|312968684|ref|ZP_07782893.1| uncharacterized ATP-binding protein yghR [Escherichia coli 2362-75]
 gi|215266382|emb|CAS10819.1| conserved predicted protein with nucleoside triphosphate hydrolase
           domain [Escherichia coli O127:H6 str. E2348/69]
 gi|312286902|gb|EFR14813.1| uncharacterized ATP-binding protein yghR [Escherichia coli 2362-75]
          Length = 252

 Score = 42.7 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193


>gi|157121250|ref|XP_001653777.1| KTI12 protein, putative [Aedes aegypti]
 gi|157121252|ref|XP_001653778.1| KTI12 protein, putative [Aedes aegypti]
 gi|108874649|gb|EAT38874.1| KTI12 protein, putative [Aedes aegypti]
 gi|108874650|gb|EAT38875.1| KTI12 protein, putative [Aedes aegypti]
          Length = 281

 Score = 42.7 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 11/91 (12%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G+  +GK+T  + ++   + +   VH+  E      A                 +
Sbjct: 3  LIVITGLPSSGKSTRAAQIQNLFEDRGKTVHLVSEWKCIQLAGY------DKNDYFNDPQ 56

Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           E ++ +  + + +       L +  +++ D
Sbjct: 57 KEKLIRSNVKSEALR-----FLNKDDLVIVD 82


>gi|78189417|ref|YP_379755.1| guanylate kinase [Chlorobium chlorochromatii CaD3]
 gi|119371200|sp|Q3AQL3|KGUA_CHLCH RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|78171616|gb|ABB28712.1| guanylate kinase [Chlorobium chlorochromatii CaD3]
          Length = 190

 Score = 42.7 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 38/214 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG  I F    GAGKTT  +++ + +   ++ V  T         +   +  L     E 
Sbjct: 6   SGKLIVFSAPSGAGKTTIATMVLQRIANLSFSVSATTRKQREGEQDGVNYYFLDKATFEK 65

Query: 63  ----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               G   E   F       + +     L  GK LL D  +D   A    +   +   L 
Sbjct: 66  KIEQGGFIEHEFFFGNYYGTLLDATESVLASGKNLLLD--VDVKGALNVRKLFGERSLLI 123

Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            +Q                 P   ++ ++R+Q R S  ++A  +  ER            
Sbjct: 124 FIQ-----------------PPSMEVLIERLQGRGSEDDAALQERLERARFE-------- 158

Query: 177 FLDIARNQPDRCHIVDSAHS--FQSVATNILNIV 208
            +  A        IV++  +     V   I+N +
Sbjct: 159 -MSFADQFD--TIIVNNNLTAAVDDVEAAIVNFI 189


>gi|134085757|ref|NP_001076861.1| GPN-loop GTPase 1 [Bos taurus]
 gi|187657929|sp|A4FUD1|GPN1_BOVIN RecName: Full=GPN-loop GTPase 1; AltName: Full=XPA-binding protein
           1
 gi|133777871|gb|AAI14713.1| GPN1 protein [Bos taurus]
 gi|296482268|gb|DAA24383.1| GPN-loop GTPase 1 [Bos taurus]
          Length = 373

 Score = 42.7 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L  +L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGYLHSQGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|118579606|ref|YP_900856.1| dethiobiotin synthase [Pelobacter propionicus DSM 2379]
 gi|118502316|gb|ABK98798.1| dethiobiotin synthase [Pelobacter propionicus DSM 2379]
          Length = 243

 Score = 42.7 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 1  MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51
          M+ G+FI+  G + G GKT   + L R L+ +  DV V +        E  R
Sbjct: 1  MSRGIFIT--GTDTGVGKTIVAATLARLLRMRGVDVGVMKPATSGCREEQGR 50


>gi|298528435|ref|ZP_07015839.1| Phosphoglycerate mutase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512087|gb|EFI35989.1| Phosphoglycerate mutase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 432

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 74/205 (36%), Gaps = 37/205 (18%)

Query: 1   MNSG----LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           MN+G    L+I+  G+   GK+T  + LK  L+++N  V +          +  R +L  
Sbjct: 27  MNNGYLNKLYIAMVGLPARGKSTVAAKLKEGLKKENIKVRIFNN------GDLRRKLLSE 80

Query: 57  CGVDEFGAEAEAIVFAAARLD----HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
                     E    A  R      +++N  R    +G++ + D              + 
Sbjct: 81  NSSRPDFYNPENKTNAEQREQIALTNIKNASRYLQGDGQVAILD------------ATNV 128

Query: 113 QHLFLDSLQEISVQEVMPDCTII---LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                 ++Q +          +    ++   +I    +  +    E + +D+  ++    
Sbjct: 129 SLKRRRTIQNMLTDHP----VLFVECINNDDEILKASITKKTEQPEFSRMDF--QEAFES 182

Query: 170 HEKRRQIFLDIAR--NQPDRCHIVD 192
            +KR Q +  IA+   +    +++D
Sbjct: 183 FKKRIQYYEHIAQPLQEERNYYVLD 207


>gi|156390552|ref|XP_001635334.1| predicted protein [Nematostella vectensis]
 gi|156222427|gb|EDO43271.1| predicted protein [Nematostella vectensis]
          Length = 467

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 69/239 (28%), Gaps = 68/239 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  G GK+    LL                       E  +  L            
Sbjct: 268 VVLLGPTGCGKSVQAELLASK-----------YGLINVSCTELIKQSLADGSK------- 309

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGERDSSQHLFLDSL 120
                       +   I+P +        DR      F D              + L  L
Sbjct: 310 ------------IGESIQPYI--------DRKMMGREFSDKILNLSERTKRDFLVPLQYL 349

Query: 121 QE--ISVQEVMPDCTIILDLPVDIGLKRVQNR--------------YSLRESACLDYFER 164
               I     +P+  + +D+P D  L+R+  R                 R S   D  +R
Sbjct: 350 HGTFIVGFGYIPE-VVFMDIPNDTILERLTLRSIDPVTGERYHLIYNPPRSSEVKDRLQR 408

Query: 165 ----KDVMIHEKR--RQIFLD-IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
               ++  ++++    Q +++ IA    +    +++     +V   I +I+   + ++V
Sbjct: 409 NKKDQEDEVNDRTAQYQAYIEEIAECYEEIGQHINADQDIHTVFECIESIIVNRIPRKV 467


>gi|150383502|sp|Q7ZWE9|KCY_DANRE RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate
           kinase; AltName: Full=Cytidylate kinase; AltName:
           Full=Deoxycytidylate kinase; AltName: Full=Uridine
           monophosphate kinase; AltName: Full=Uridine
           monophosphate/cytidine monophosphate kinase;
           Short=UMP/CMP kinase; Short=UMP/CMPK
          Length = 196

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190
            +  D   ++ + R   R         +    E++     +  R I +++   Q  +   
Sbjct: 117 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 174

Query: 191 VDSAHSFQSVATNILNIVWE 210
           +D++ S   V  ++ NI+ +
Sbjct: 175 IDASRSVDEVFADVKNILEK 194


>gi|108760699|ref|YP_630810.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622]
 gi|108464579|gb|ABF89764.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622]
          Length = 213

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 23/162 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F++  G  GAGKTT   ++ +      Y+  +  EP         R          F  
Sbjct: 10  RFVALAGNIGAGKTTAAKMISQAF---GYE--LFDEP--VIDNRFLRDYYADMTRWSFTL 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY--AYQGERDSSQHLFLD-- 118
           + E ++    R++H   +I          + DR  + D      Y        +  LD  
Sbjct: 63  QLEFLI---RRVEH-HELIHSYRRS---CVQDRTLYEDPEIFAKYLHGLGHLTNAELDLY 115

Query: 119 --SLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESA 157
               Q +S   + PD  I  ++  V++ L+R++ R    E  
Sbjct: 116 YEYFQRLSRHIIRPDKVICFEVGSVEVLLQRIRTRGREEEKG 157


>gi|257867123|ref|ZP_05646776.1| deoxynucleoside kinase [Enterococcus casseliflavus EC30]
 gi|257873458|ref|ZP_05653111.1| deoxynucleoside kinase [Enterococcus casseliflavus EC10]
 gi|257801179|gb|EEV30109.1| deoxynucleoside kinase [Enterococcus casseliflavus EC30]
 gi|257807622|gb|EEV36444.1| deoxynucleoside kinase [Enterococcus casseliflavus EC10]
          Length = 220

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 58/237 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++  +L+                      ++A    +    V       
Sbjct: 10  IVLAGTIGAGKSSLTALIANHF-----------------GSQAFYESIDDNEVLPLFYAD 52

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS--------- 112
               A +     L+     I+ A+ +   +L DR  + DS   +                
Sbjct: 53  PNKYAFLLQIYFLNKRFESIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVKVY 111

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             L  + L+E+  +  +  PD  + + +  +  L+R++ R            E + +   
Sbjct: 112 DELLANMLEELPYAAHKKHPDLLVHIRVSFETMLERIEKRGR----------EYEQLTFD 161

Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH-----SFQSVATNILNIVWELVQK 214
                 + ++ +                +D          Q+ A  +L +V + ++ 
Sbjct: 162 PSLYDYYKELNKRYDQWYEEYNESPKIQIDGDRFNFVEDPQA-AQAVLTMVEDALKD 217


>gi|257053388|ref|YP_003131221.1| cytidylate kinase [Halorhabdus utahensis DSM 12940]
 gi|256692151|gb|ACV12488.1| cytidylate kinase [Halorhabdus utahensis DSM 12940]
          Length = 192

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 36/174 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G+GK+T  + L   L           +       +  R +           
Sbjct: 1   MLITVSGPAGSGKSTLAASLADAL-----------DYDHVSGGDIFRSL---ADERGMTP 46

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +    + +  + + R      + +               RD    +    L    
Sbjct: 47  -----LELNKQAEEDDEIDRDLDRRLRDV--------------ARDRDDLVLESRLAGWM 87

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIF 177
             +   D  + LD P+ +  +R+  R +   E A  +  ER +   H + R+ +
Sbjct: 88  AGDHA-DLKLWLDAPLSVRAERISQRENKPVEQARTETRERAESEAH-RYREYY 139


>gi|239618244|ref|YP_002941566.1| adenylate kinase [Kosmotoga olearia TBF 19.5.1]
 gi|259494009|sp|C5CGI1|KAD_KOSOT RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|239507075|gb|ACR80562.1| adenylate kinase [Kosmotoga olearia TBF 19.5.1]
          Length = 215

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 68/238 (28%), Gaps = 58/238 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REP--GGTPAAEAARHVLLSCGVD 60
           I   G  GAGK T    +     R       T    RE    GT   +  + ++    + 
Sbjct: 3   IILLGPPGAGKGTQAKKIA---MRYGIPHISTGDMLREAVAAGTELGKKVKEIIEKGLLV 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                    +  A   D ++   +P   +G   + D F  +    +       +L  +  
Sbjct: 60  PDD------LMVAIVEDRLK---KPDSAKGF--ILDGFPRTVQQAESLSGILGNLGKEL- 107

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---------------DY---F 162
                     D  I++D P ++ ++R+ +R        +               D     
Sbjct: 108 ----------DAVILIDAPEEVVVERISSRRVCPSCGKVYNLLTIKPKNDMLCDDCNIGL 157

Query: 163 ERKDVMIHEKRRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +++       R+ +               +      +D +   ++V   I   +  L
Sbjct: 158 IQREDDKPATVRERYRVYMEKTAPVINYYSEHGSLITIDGSLDIEAVTEEIFKNLENL 215


>gi|86360414|ref|YP_472302.1| hypothetical protein RHE_PE00137 [Rhizobium etli CFN 42]
 gi|86284516|gb|ABC93575.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 191

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 68/207 (32%), Gaps = 53/207 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64
            EG  G GKT+    +   L+R+ Y V     V    G      A     L+   +    
Sbjct: 30  IEGSSGTGKTS----VASELERRGYHVVHGDRVLAYVGDPETGRA-----LAGPPEG--- 77

Query: 65  EAEAIVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLDSLQ 121
                   A R      + I PA     I       D++    +      + H FL    
Sbjct: 78  --------ADRIAWGYAHWIWPAEKVRAIA-----ADTTHPVTFFCGGSRNFHKFLHLF- 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                    D   +LD+ V+   +R+  R +          ER  V+ +   R+ +L   
Sbjct: 124 ---------DKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRYHNTRE-YL--- 167

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
              P   + +D+A S   V  +IL  +
Sbjct: 168 ---PAGIN-IDAAGSVTGVVDDILAQL 190


>gi|23099616|ref|NP_693082.1| dephosphocoenzyme A kinase [Oceanobacillus iheyensis HTE831]
 gi|51315997|sp|Q8EPE7|COAE_OCEIH RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|22777846|dbj|BAC14117.1| dephospho-CoA kinase (dephosphocoenzyme A kinase) [Oceanobacillus
           iheyensis HTE831]
          Length = 199

 Score = 42.7 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 50/221 (22%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+ G   +GK+T  S+L      KN+ V           A+     ++  G   +    E
Sbjct: 6   GLTGGIASGKSTVSSMLLE----KNFPVI---------DADLIAREVVEPGEKAYDQILE 52

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHLFLDSLQ--- 121
           A  F    + + + + RP L  G I+  D   R   ++  +   R+       D +    
Sbjct: 53  A--FGKEIIQNDQKIDRPKL--GSIIFTDEDKRKQLNAIVHPAVRNRMLTKRDDYINNDV 108

Query: 122 -----------EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                      E ++  ++ D T+++ +  DI L R+  R    E   LD   +  + + 
Sbjct: 109 PCVILDIPLLFESNLGYLV-DKTLVVYVDEDIQLTRLMKRNEYSEKEALDRI-KAQMSLK 166

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           EK      D+A        ++D+  S +     + N++ + 
Sbjct: 167 EK-----ADLAD------IVIDNNQSVEETKLQLDNVLQKW 196


>gi|300703161|ref|YP_003744763.1| deoxyadenosine kinase [Ralstonia solanacearum CFBP2957]
 gi|299070824|emb|CBJ42121.1| putative Deoxyadenosine kinase [Ralstonia solanacearum CFBP2957]
          Length = 214

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 26/179 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT     L   L+       +   P   P                   + 
Sbjct: 9   IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYEA---PARYALPVQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             ++  A RL         A + G+ ++ D FL     +      +  L    L +   Q
Sbjct: 62  RFLLQRAQRL----TAWHKATLAGERIVADSFLPRDRLFAQLTLPADELV---LYDAMAQ 114

Query: 127 EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + P     D  + L    +  L R+  R    E+         DV   E+    + ++
Sbjct: 115 ALAPPPQRIDLVVCLQASAEDLLPRIAKRAVPFEAGI-------DVEYLERICAAYGEL 166


>gi|229196730|ref|ZP_04323473.1| uridine kinase [Bacillus cereus m1293]
 gi|228586805|gb|EEK44880.1| uridine kinase [Bacillus cereus m1293]
          Length = 198

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 70/219 (31%), Gaps = 49/219 (22%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     IS   + G GKTT    L   L                      + +      
Sbjct: 13  MNKKTKVISIAAVSGGGKTTVTEGLTHKLMNS-------------------KALYFDSYT 53

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +    A+   +     ++ E V+ P + + + L+ D    S+  Y              
Sbjct: 54  FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IILDYPFAY 103

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173
           L     Q +  D TI +D P+DI + R   R         D+ E     IH         
Sbjct: 104 LNSEMRQFI--DVTIFIDTPLDIAMARRIFR---------DFKEDAMSEIHNDLKHYITY 152

Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
            R+ +L+     +P+   ++D A S   +   I   ++ 
Sbjct: 153 ARKAYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 191


>gi|241117264|ref|XP_002401863.1| ADP ribosylation factor 79F, putative [Ixodes scapularis]
 gi|215493219|gb|EEC02860.1| ADP ribosylation factor 79F, putative [Ixodes scapularis]
          Length = 173

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          +G  I F G  G+GKTT +  L++ L  +   
Sbjct: 1  AGKMIIFVGPSGSGKTTLLKRLEQHLDGRGRT 32


>gi|194431794|ref|ZP_03064085.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|194420150|gb|EDX36228.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|320180984|gb|EFW55905.1| hypothetical protein SGB_01807 [Shigella boydii ATCC 9905]
 gi|332088361|gb|EGI93480.1| hypothetical protein SD15574_3334 [Shigella dysenteriae 155-74]
          Length = 252

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193


>gi|24943104|ref|NP_733866.1| ORF13 [Callitrichine herpesvirus 3]
 gi|13676655|gb|AAK38221.1|AF319782_15 ORF13 [callitrichine herpesvirus 3]
          Length = 662

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 66/186 (35%), Gaps = 30/186 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-----LLSCGVDEFG 63
           FEG+ G GKTT +  LK           V  EP           +     LL     +  
Sbjct: 346 FEGVPGVGKTTMLKHLKSVF---GDLTVVFNEPMAFWTGVYENTLKRTSKLLKGRGGQTS 402

Query: 64  AEAEAIV----------FAAAR---LDHVENVIRPALMEGKILLCDRFLDSSYA-----Y 105
             A+ +            AAAR       EN  RP       +L DR L ++       +
Sbjct: 403 GSADLLSCQMKFATPFRVAAARKRTFYSSENGPRPVAPLDCWILHDRHLIAATVVFPLLH 462

Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFER 164
              +  S   F+  L   + ++     TI  L L +   L+R++ R    E++  +Y +R
Sbjct: 463 LKNKLLSFSDFIQLLSTFNAEDGE---TIVWLKLNMAENLRRIKKRGRRYEASNEEYLKR 519

Query: 165 KDVMIH 170
            +   H
Sbjct: 520 VNWAYH 525


>gi|74313530|ref|YP_311950.1| hypothetical protein SSON_3130 [Shigella sonnei Ss046]
 gi|73857007|gb|AAZ89714.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 224

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 36/160 (22%)

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSL----- 120
           F A RL      +      G I+L DR+       AY G     +     F+  L     
Sbjct: 83  FVARRL-LRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQER 141

Query: 121 ---QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQ 175
                ++     PD  I L++ +++   R     R SL     +       +        
Sbjct: 142 KAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLARKIAI----TPQLTF------ 189

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
               +          +D+    + V  +    + + +  R
Sbjct: 190 GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 221


>gi|15892908|ref|NP_360622.1| adenylate kinase [Rickettsia conorii str. Malish 7]
 gi|20138489|sp|Q92GY7|KAD_RICCN RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|15620099|gb|AAL03523.1| adenylate kinase [Rickettsia conorii str. Malish 7]
          Length = 212

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +           +       +  R ++ +       +
Sbjct: 1   MMVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  +L  +    + Y   G   + +       +   
Sbjct: 45  EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KR+  RYS +    +                      DY 
Sbjct: 101 KEKIK---IIYFDVSDELLIKRILGRYSCKNCGKIYNRYFVQPKTDNVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +  + +KR +++      +          +IV+ + + Q +  +I  I+ 
Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210


>gi|157828839|ref|YP_001495081.1| adenylate kinase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933566|ref|YP_001650355.1| adenylate kinase [Rickettsia rickettsii str. Iowa]
 gi|166219998|sp|A8GT48|KAD_RICRS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|189028362|sp|B0BUN9|KAD_RICRO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|157801320|gb|ABV76573.1| adenylate kinase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908653|gb|ABY72949.1| adenylate kinase [Rickettsia rickettsii str. Iowa]
          Length = 212

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +           +       +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  + L   F   +  Y  +            +   
Sbjct: 45  EAELINNYVRQGELIPNEIVNQVIKNFL-LS--FEYKN-GYILDGYPRNLEQAQFFESFI 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KR+  RYS +    +                      DY 
Sbjct: 101 KEKIK---IIYFDVSGELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +  + +KR +++      +          +IV+ + + Q +A +I  I+ 
Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIAMDIQKILK 210


>gi|119587448|gb|EAW67044.1| hCG2032408, isoform CRA_f [Homo sapiens]
          Length = 1446

 Score = 42.3 bits (99), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 797 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 854

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 855 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 891


>gi|325971306|ref|YP_004247497.1| Iron-chelate-transporting ATPase [Spirochaeta sp. Buddy]
 gi|324026544|gb|ADY13303.1| Iron-chelate-transporting ATPase [Spirochaeta sp. Buddy]
          Length = 256

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G FI+  G  G+GK+T +  + + L+     V V
Sbjct: 28 KGAFIALTGPNGSGKSTLLKFIYKHLKPSEGKVLV 62


>gi|91762165|ref|ZP_01264130.1| Guanylate kinase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717967|gb|EAS84617.1| Guanylate kinase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 210

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 51/164 (31%), Gaps = 23/164 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ +      GAGKTT + LL +         H TR+P     A+   + +     +   
Sbjct: 7   GIMVILSSPSGAGKTTLVKLLSKNKNFHISVSHTTRKPRLNEIADKDYYFVDHDKFESLI 66

Query: 64  AEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              E + +A             +   L + + ++ D        +QG            L
Sbjct: 67  KNEEFLEYAKVFNHLYGTTRTPVIEKLEKSENVIFD------IDWQGADQIKNKKLNYKL 120

Query: 121 QEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                       T  + LP   +I  +R+ NR    +    +  
Sbjct: 121 -----------ITFFI-LPPSKEILFERLSNRDMKDKLIVEERM 152


>gi|296111521|ref|YP_003621903.1| deoxyguanosine kinase [Leuconostoc kimchii IMSNU 11154]
 gi|295833053|gb|ADG40934.1| deoxyguanosine kinase [Leuconostoc kimchii IMSNU 11154]
          Length = 213

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 27/163 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+   +L   L+ K             P        L      ++G   
Sbjct: 2   IVLSGTIGAGKTSLTEMLADHLESK----AFYESVEDNPILP-----LFYDNPKKYGFLL 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHL 115
           +               I+ A   GK  + DR  + D+           A Q E D  + L
Sbjct: 53  QIYFLNKRLAQ-----IKVAQSSGKNNILDRSIYEDALLFQLTADLDRATQTEVDIYKSL 107

Query: 116 FLDSLQEIS-VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRES 156
             + + +I+ V ++  PD  I + +  +  L R++ R    E 
Sbjct: 108 VDNMMADIAGVADIKNPDLLIHVRVSFETMLDRIEKRGRSFEQ 150


>gi|229100502|ref|ZP_04231357.1| hypothetical protein bcere0020_56770 [Bacillus cereus Rock3-29]
 gi|229107004|ref|ZP_04237101.1| hypothetical protein bcere0019_56700 [Bacillus cereus Rock3-28]
 gi|228676430|gb|EEL31179.1| hypothetical protein bcere0019_56700 [Bacillus cereus Rock3-28]
 gi|228682884|gb|EEL36907.1| hypothetical protein bcere0020_56770 [Bacillus cereus Rock3-29]
          Length = 167

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T  +LL   L  KN DV +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTANLLYDILIEKNIDVDLFLE 39


>gi|195978525|ref|YP_002123769.1| dephospho-CoA kinase CoaE [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975230|gb|ACG62756.1| dephospho-CoA kinase CoaE [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 197

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 77/221 (34%), Gaps = 51/221 (23%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----------HVLLS 56
           GI G   +GK+T ++L+    ++  Y V    +      A+  R            +LL 
Sbjct: 6   GITGGIASGKSTAVALI----RQAGYQVIDADQVVHELQAKGGRLYQVLLKTFGQDILLP 61

Query: 57  CGVDEFGAEAEAIVFAAARL----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
            G  +    AE +   A  +         +IR AL + K              +    + 
Sbjct: 62  SGELDRPKLAELLFAHADSMAKSSQQQNAIIREALAKKK--------------EQLAQTE 107

Query: 113 QHLFLD--SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              F+D   L E+  Q+   D   +L +     LKR+  R  L E A       +  M  
Sbjct: 108 DIFFMDLPLLVELGYQDWF-DAIWLLYVDDKTQLKRLMERNQLTELAAKQRIASQLPMSQ 166

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           +K    + D          ++D+    Q++ T I   + +L
Sbjct: 167 KK---AYAD---------VVIDNNGDLQALETQISKALQDL 195


>gi|194212629|ref|XP_001917252.1| PREDICTED: similar to dynein, cytoplasmic 2, heavy chain 1 [Equus
            caballus]
          Length = 4286

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P     RH LL     +    
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|257057106|ref|YP_003134938.1| hypothetical protein Svir_31360 [Saccharomonospora viridis DSM
           43017]
 gi|256586978|gb|ACU98111.1| hypothetical protein Svir_31360 [Saccharomonospora viridis DSM
           43017]
          Length = 409

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 37/159 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FI F G+ G+G+TTH   L+  L             G     +  R +L          
Sbjct: 1   MFI-FRGLPGSGETTHARELRFAL------------DGTVVGCDHLRELLFGLDRYRPSN 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE     A      + +IR AL  G+ +  D              + +  ++  L  I+
Sbjct: 48  EAE-----AQVTKTQDTMIRDALRAGRNVSVD------------DMNLRTRYVRRLLGIA 90

Query: 125 VQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACL 159
             E  P    D T   D+P++  +KR Q+R S    A +
Sbjct: 91  RSEATPVQIIDLT---DVPLEECIKRDQDRDSPIGEAVI 126


>gi|123966954|ref|YP_001012035.1| adenylate kinase [Prochlorococcus marinus str. MIT 9515]
 gi|166980349|sp|A2BYR7|KAD_PROM5 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|123201320|gb|ABM72928.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9515]
          Length = 182

 Score = 42.3 bits (99), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 69/212 (32%), Gaps = 39/212 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M   L   F G  GAGK T  + L     +L     ++        T   +  + ++   
Sbjct: 1   MKKHLL--FLGPPGAGKGTQAAYLSEANSYLHLSTGELLRKEIDLDTYLGKQVKDIM--N 56

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             +                  V  ++   L +          +  +   G   +     +
Sbjct: 57  KGELVSD------------QLVLEIVNKNLSKD---------NKGWILDGYPRNLSQ--V 93

Query: 118 DSLQEISVQEVMP-DCTIILDLPVDIGLKR--VQNRYSLRESACLDYFERKDVMIHEKRR 174
           +SL E+ +    P +    LD+P ++ +KR  ++ R    E        +      E   
Sbjct: 94  NSLNEVLMNINQPLEIVFYLDVPDEVLIKRLLLRGRKDDNEETIKTRL-KIYKETTEPLI 152

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
           + + +++  +      +++    ++++ +I  
Sbjct: 153 EYYKNLSLLEY-----INADGDLKTISNDIKQ 179


>gi|268324773|emb|CBH38361.1| adenylate kinase [uncultured archaeon]
          Length = 216

 Score = 42.3 bits (99), Expect = 0.045,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 23/147 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T   +L     +       T         +  R  L +       A+ 
Sbjct: 3   IVLFGPPGSGKGTQAKMLAE---KYGVPHIST--------GDILRENLKNETKLGLEAKT 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEIS 124
                   + + V + +   L++ ++   D    S +   G   +          L E+ 
Sbjct: 52  -----YMDKGELVPDDLLIGLIKDRLSQSD--CASGFLLDGYPRTLPQAEALSKILSELG 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY 151
                 D  + +D+P    LKR+  R 
Sbjct: 105 KNL---DLVLNIDVPDAELLKRLAGRR 128


>gi|299533619|ref|ZP_07046993.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni
           S44]
 gi|298718341|gb|EFI59324.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni
           S44]
          Length = 637

 Score = 42.3 bits (99), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 28/138 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +LL+  L  +    +                 LL       G   + 
Sbjct: 466 FTGLSGAGKSTIANLLETRLHARGRHTY-----------------LLDGDNVRHGLNRDL 508

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
               A R++++  V       GK+     F+D+         S      +  +++     
Sbjct: 509 GFTDADRVENIRRVAEV----GKL-----FVDAGLIAITAFISPFQAEREMARKLVKDGE 559

Query: 129 MPDCTIILDLPVDIGLKR 146
                + +D P+ +  +R
Sbjct: 560 F--LEVFIDTPLSVAEER 575


>gi|110798787|ref|YP_696434.1| guanylate kinase [Clostridium perfringens ATCC 13124]
 gi|119371205|sp|Q0TPK6|KGUA_CLOP1 RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|110673434|gb|ABG82421.1| guanylate kinase [Clostridium perfringens ATCC 13124]
          Length = 216

 Score = 42.3 bits (99), Expect = 0.045,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          V   TR P          H L      
Sbjct: 9   NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRNPRVGEVDGVNYHFLTKEEFK 68

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +  AE + +       +H E          + +   L EGK ++                
Sbjct: 69  QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 106

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
                    ++E +          I  LP   +   +R+  R S    + +  F+     
Sbjct: 107 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 157

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200
                   + +I         +V     D+    +++
Sbjct: 158 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 187


>gi|332179523|gb|AEE15212.1| Adenylate kinase [Thermodesulfobium narugense DSM 14796]
          Length = 216

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 43/164 (26%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
            F G  GAGK T   +L   L+                  +  R  +        G EA+
Sbjct: 4   VFLGAPGAGKGTQAKMLVEQLK-----------IPQISTGDMLRKAVADG--TPLGKEAK 50

Query: 68  AIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           + +    + + V          E +  P    G   + D F          R+ SQ   L
Sbjct: 51  SYM---DKGELVPDSVVIGLIKERLQEPDTENGF--ILDGF---------PRNVSQAKEL 96

Query: 118 DSLQEISVQEV-MP-DCTIILDLPVDIGLKRVQNRYSLRESACL 159
           DSL    + ++  P D  ++LD+P +  +KR+  R + +    +
Sbjct: 97  DSL----LGDLGKPLDVALVLDVPFEDLMKRLTGRRTCKSCGQM 136


>gi|324005421|gb|EGB74640.1| hypothetical protein HMPREF9532_04931 [Escherichia coli MS 57-2]
          Length = 256

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 27  LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 87  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + +D  + R
Sbjct: 146 YYDGPGIGVERATGKIRMFLAQRERRLYQKMAQY--RPELIIRLGIDIDTAISR 197


>gi|322495227|emb|CBZ30531.1| putative dynein heavy chain [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 4241

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQR    V      P   P     R  LL     +    
Sbjct: 1943 VVLVGPSGSGKSTLMRVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AAR      V+         ++CD                   +++SL  +
Sbjct: 1998 FDGVLTDAAR-----KVVEEEASVRSWIVCD-------------GDIDPAWVESLNSV 2037


>gi|227503542|ref|ZP_03933591.1| shikimate kinase [Corynebacterium accolens ATCC 49725]
 gi|227075578|gb|EEI13541.1| shikimate kinase [Corynebacterium accolens ATCC 49725]
          Length = 179

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 71/209 (33%), Gaps = 49/209 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  GAGK+T    L   L     D  H+     G P  E     + S   +    E
Sbjct: 16  VVLIGPPGAGKSTIGRRLSHALNCDLVDSDHLIEMAEGKPCGE-----VFSEKGEPAFRE 70

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E         +HV      AL +G ++       S     G          + L+  + 
Sbjct: 71  LE--------TEHVAE----ALQKGGVV-------SL----GGGAVMTASTRELLERHT- 106

Query: 126 QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                   + LD+  + G +R    +NR  L     ++++      I E RR  +L++A 
Sbjct: 107 -------VVFLDISAEEGARRTAGDRNRPVLAADNPVEHY----RSIVETRRPFYLEVAD 155

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               R    D   S Q V  +IL  +  L
Sbjct: 156 ---FRVRT-D-TRSPQQVVGDILGFLETL 179


>gi|119511160|ref|ZP_01630277.1| adenylate kinase [Nodularia spumigena CCY9414]
 gi|119464148|gb|EAW45068.1| adenylate kinase [Nodularia spumigena CCY9414]
          Length = 186

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 46/219 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I F G  G+GK T   +L   L   N     T         E  R  +      
Sbjct: 1   MTVTRLI-FLGPPGSGKGTQAQILAEDL---NIPHIST--------GEILRQAM--QEQT 46

Query: 61  EFGAEAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFL 117
             G +A++ V +   +    V+++++  L +  +        S +   G      Q +FL
Sbjct: 47  PLGIKAQSYVNSGDLVPDQLVQDLVQERLSQPDV-------KSGWILDGFPRKVTQAVFL 99

Query: 118 DS-LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-----LD--YFERKDVMI 169
           +  L E++         I LD P D+ + R+ +R    ++       LD    E   ++ 
Sbjct: 100 EKLLAEMNQGGER---VINLDAPDDVVVARLLDRGRKDDTEAVIRHRLDVYRAETAPLID 156

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +   RQ  L            V+   S + V   +  IV
Sbjct: 157 YYGDRQKLL-----------TVNGDQSQEEVTHELQKIV 184


>gi|53794027|gb|AAU93604.1| cytoplasmic dynein heavy chain 2.1 [Leishmania mexicana]
          Length = 4241

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQR    V      P   P     R  LL     +    
Sbjct: 1943 VVLVGPSGSGKSTLMRVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AAR      V+         ++CD                   +++SL  +
Sbjct: 1998 FDGVLTDAAR-----KVVEEEASVRSWIVCD-------------GDIDPAWVESLNSV 2037


>gi|45358246|ref|NP_987803.1| signal recognition particle-docking protein FtsY [Methanococcus
           maripaludis S2]
 gi|44921003|emb|CAF30239.1| signal recognition particle receptor SRalpha [Methanococcus
           maripaludis S2]
          Length = 383

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI G GKTT IS L   L+ K Y   +    G T  A A   +           +     
Sbjct: 183 GINGTGKTTSISKLAYILKEKGYSAVMAA--GDTFRAGAIEQLEEHGKNTGI--KVIKHQ 238

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             A     + + I  A  +G  ++L D            R ++    +D +++  V+   
Sbjct: 239 KGADSAAVIYDAISHAKAKGLNVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 288

Query: 130 PDCTII 135
           PD  I 
Sbjct: 289 PDLIIF 294


>gi|158315913|ref|YP_001508421.1| uridine kinase [Frankia sp. EAN1pec]
 gi|158111318|gb|ABW13515.1| putative kinase [Frankia sp. EAN1pec]
          Length = 230

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 51/178 (28%), Gaps = 21/178 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFGAE 65
           ++ +G + AGKTT    L   L  +   V      G   P A   R   LS         
Sbjct: 33  VAIDGPDAAGKTTLADELAGTLADRGRPVIRASVDGFHQPQAVRRRRGSLSPEGYFLD-- 90

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLFLDSLQE 122
             A  + A R   ++ +        +    D   DS       +   ++   +    L  
Sbjct: 91  --AFDYPALRRLLIDPLSPDGDRRYRTAAFDHRSDSPLDSPTREAAGNAVLIVDGVFLLR 148

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++    D  + L +     L+R   R  +      D             R+ +   
Sbjct: 149 HELRGCW-DLAVFLQISPAESLRRA-LRRDVALFGSPD-----------AVRERYKAR 193


>gi|328881669|emb|CCA54908.1| Dephospho-CoA kinase [Streptomyces venezuelae ATCC 10712]
          Length = 201

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 79/218 (36%), Gaps = 37/218 (16%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFG 63
           GI GAGK+    LL  +   L   +       EPG TP   A        +L+       
Sbjct: 9   GI-GAGKSEVSRLLVSYGAVLIDADRIAREVVEPG-TPGLAAVVEAFGPEVLTVEGTLDR 66

Query: 64  AEAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  ++VFA A RL  +  ++ P             + +  A    R  +  + +  +  
Sbjct: 67  PKLGSVVFADAERLATLNAIVHPL------------VGARSAELESRAGAGDVVVHDVPL 114

Query: 123 ISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++   + P  D  +++D   +  L R+     + ES              +  R+  L +
Sbjct: 115 LAENGLAPLYDLVVVVDASPETQLDRLVRLRGMAESEARARMAA------QATREQRLAV 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
           A        ++D+     ++   +   VW+ +++R S 
Sbjct: 169 AE------LVIDNDGPLDALEPQVRK-VWDELERRASE 199


>gi|322823518|gb|EFZ29254.1| hypothetical protein TCSYLVIO_4502 [Trypanosoma cruzi]
          Length = 676

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 49/228 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G    GK+T ++ L+  + ++  Y V    E            +L++ G+      
Sbjct: 132 ICLTGGPCGGKSTLLTQLQAKMPQRTGYKVFCVPEAAT---------LLVTGGMVWNSDL 182

Query: 66  AEAIVFAAARLD--HVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            E    A  R+     +     A+  G   I++ DR      A+      S+ +F   L+
Sbjct: 183 IEEQQLAVLRVQIGLEDQFYNVAMASGAPSIVISDRGTMDGRAF-----CSEEIFERILR 237

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD---YFER--KDVMI 169
            ++             + ++    R       V      +E   LD    +E   + V  
Sbjct: 238 RLN-------------VTLETLRDRYDAVIHLVTAASGAKEYYNLDNPSRYENVEEAVES 284

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
            +K RQ+++      P    I+D++ +F+      L++V +++ +R S
Sbjct: 285 DKKLRQVYV----GHPM-LRIIDNSTTFEEKMERGLSLVGQVIGQRFS 327


>gi|295692899|ref|YP_003601509.1| uridine kinase [Lactobacillus crispatus ST1]
 gi|295031005|emb|CBL50484.1| Uridine kinase [Lactobacillus crispatus ST1]
          Length = 145

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 42/158 (26%), Gaps = 33/158 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S   I   G  G+GKTT    + R L      +     P  T   E            
Sbjct: 1   MTS-KLIIIRGNSGSGKTTLSKEIHRRLPHNTLLI-----PQDTVRREMLNA--KDGENT 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++       H    I   ++  K             Y      SQ LF D +
Sbjct: 53  SALPLLENLLEYGYH--HCSYTILEGILNAKW------------YADLFKKSQQLFGDQI 98

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
                           D+P +  +KR + R+       
Sbjct: 99  YAY-----------YFDIPFEETMKRHKTRHEHSFGGA 125


>gi|206891102|ref|YP_002249627.1| adenylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226743912|sp|B5YHP1|KAD_THEYD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|206743040|gb|ACI22097.1| adenylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 215

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 81/246 (32%), Gaps = 78/246 (31%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
            F G  GAGK T    L     +       T         +  R  +        G EA+
Sbjct: 4   VFLGAPGAGKGTQAKRLVE---KYGIPQIST--------GDLLRAAV--AAGTPLGKEAK 50

Query: 68  AIVFAAARLDHVENV-----IRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDS 119
           A +    R + V +      ++  L +       + D F          R+ +Q   LD 
Sbjct: 51  AYM---DRGELVPDKVVLGMVKERLSQNDCKKGFILDGF---------PRNVAQAEALDK 98

Query: 120 -LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL------------------ 159
            L E++    MP D  + LD+P D  +KR+  R + +    +                  
Sbjct: 99  MLSEMN----MPLDLALNLDVPFDDLMKRLTGRRTCKSCGQMYNVYYSPSKVEGKCDKCG 154

Query: 160 -DYFERKDV--MIHEKRRQIFLDIARNQPDRCHIVD------------SAHSFQSVATNI 204
            + F+R D       KR +++   A+ +P    ++D               S   +  +I
Sbjct: 155 GELFQRDDDKEETIRKRLEVY--RAQTEP----LIDYYSKKGILKSVSGTGSIDEIFNSI 208

Query: 205 LNIVWE 210
             I+ +
Sbjct: 209 CAILEK 214


>gi|158316007|ref|YP_001508515.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Frankia sp. EAN1pec]
 gi|158111412|gb|ABW13609.1| sulfate adenylyltransferase, large subunit [Frankia sp. EAN1pec]
          Length = 647

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  + Y  +                 LL       G   + 
Sbjct: 466 FSGLSGAGKSTIANLVEKRLHEQGYHTY-----------------LLDGDNVRHGLNKDL 508

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLC 95
               A R++    V  V R  +  G I+L 
Sbjct: 509 GFTDADRVENIRRVAEVARLMVDAGVIVLA 538


>gi|291300200|ref|YP_003511478.1| uridine kinase [Stackebrandtia nassauensis DSM 44728]
 gi|290569420|gb|ADD42385.1| uridine kinase [Stackebrandtia nassauensis DSM 44728]
          Length = 225

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 68/202 (33%), Gaps = 27/202 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ +G + AGKTT    L   +      +    +    P AE  R      G+   G   
Sbjct: 29  VAVDGPDAAGKTTLADELAPRIPAPATVIRAGIDSFHRPRAERLRR----GGLSPEGCYH 84

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS----LQE 122
           +   + A R   +E    P    G      R+  + + ++ +R   + L L      L  
Sbjct: 85  DTFDYDALRRQLLE----PLGPNGDR----RYRTAVFDHREDRPLDEPLRLAPPGSVLIC 136

Query: 123 ISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             V  + P      D  ++LD+  D   +R   R +          ER        +R  
Sbjct: 137 DGVFLLRPQLRHHWDLRVLLDIDEDEIERRALERDASMMGGADVVRERYRRRYLPAQR-- 194

Query: 177 FLDIARNQPDRC--HIVDSAHS 196
            L  A   P+R    ++D+   
Sbjct: 195 -LYRAEAAPERFADVLIDNNQP 215


>gi|261338904|ref|ZP_05966762.1| hypothetical protein ENTCAN_05101 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318728|gb|EFC57666.1| dephospho-CoA kinase [Enterobacter cancerogenus ATCC 35316]
          Length = 206

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 74/221 (33%), Gaps = 40/221 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           G  ++  G  G+GK+T  +   R              V     P            +L+ 
Sbjct: 2   GYIVALTGGIGSGKSTVANAFSRLGITIIDADIIARQVVEPNTPALKAIETHFGSRILNA 61

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDS 111
                  +    +F+    D  E V   AL+   I            YQ       E  S
Sbjct: 62  DGTLNRRQLREYIFS----DSSEKVWLNALLHPII------------YQETQRQIAEARS 105

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              L++  L   +  +   D  +++D+  +  ++R   R ++           + ++  +
Sbjct: 106 PYVLWVVPLLVENQLQRKADRVLVIDVSPETQIQRTMARDNVSREHA------EQILAAQ 159

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             R   L +A +      ++D+  +  ++A+++  +  + +
Sbjct: 160 ATRDARLAVADD------VIDNNGAPDAIASDVARLHEQYL 194


>gi|126179908|ref|YP_001047873.1| signal recognition particle-docking protein FtsY [Methanoculleus
           marisnigri JR1]
 gi|125862702|gb|ABN57891.1| signal recognition particle-docking protein FtsY [Methanoculleus
           marisnigri JR1]
          Length = 354

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT ++ + ++LQ   + V +    G T  A A   +      D  G + 
Sbjct: 159 ILFTGVNGTGKTTTVAKVGQYLQTNGFTVVI--GAGDTFRAGAIEQI--RTHADRLGIKT 214

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + ++ A      ++L D            R  ++   ++ L +I  
Sbjct: 215 IQHQAGADPSAVLFDAVQYAKAHDIDVVLAD---------TAGRFHNRANLMNQLDKI-R 264

Query: 126 QEVMPDCTIILD 137
           + + PD  + +D
Sbjct: 265 RVMKPDLVVYVD 276


>gi|91772186|ref|YP_564878.1| signal recognition particle-docking protein FtsY [Methanococcoides
           burtonii DSM 6242]
 gi|91711201|gb|ABE51128.1| signal recognition docking protein FtsY [Methanococcoides burtonii
           DSM 6242]
          Length = 366

 Score = 42.3 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 17/146 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT IS + + L+   Y V +    G T  A A   + +    +  G + 
Sbjct: 174 IVFIGINGTGKTTTISKMAKRLKDMKYSVVIAA--GDTFRAGAIDQIAIH--AERIGVKL 229

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       V + ++ A      ++L D            R  +    +  L++   
Sbjct: 230 IKHQEGGDPAAVVYDAVQHAKAHNVDVVLSD---------TAGRMHTNVNLMAQLEK-VC 279

Query: 126 QEVMPDCTIILD--LPVDIGLKRVQN 149
           +   PD  I +D  +  +  ++R Q 
Sbjct: 280 RVSSPDLIIFVDEAVAGNDAVERAQQ 305


>gi|326925346|ref|XP_003208877.1| PREDICTED: UMP-CMP kinase-like [Meleagris gallopavo]
          Length = 281

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 24/149 (16%)

Query: 78  HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125
               +I   + EG+I+       L  R +D + A   Q  +          D+LQ  +  
Sbjct: 133 QYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDNLQGWNKT 192

Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRR---QIFL 178
            +   D    +  D   +I + R   R      +  +    E++     +  R    ++ 
Sbjct: 193 MDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTRPIIDLYE 252

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207
            +      +   VD++ S   V   ++ I
Sbjct: 253 RM-----GKVRRVDASKSVDEVFEKVVQI 276


>gi|264678163|ref|YP_003278070.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni
           CNB-2]
 gi|262208676|gb|ACY32774.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni
           CNB-2]
          Length = 637

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 28/138 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +LL+  L  +    +                 LL       G   + 
Sbjct: 466 FTGLSGAGKSTIANLLETRLHARGRHTY-----------------LLDGDNVRHGLNRDL 508

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
               A R++++  V       GK+     F+D+         S      +  +++     
Sbjct: 509 GFTDADRVENIRRVAEV----GKL-----FVDAGLIAITAFISPFQAEREMARKLVKDGE 559

Query: 129 MPDCTIILDLPVDIGLKR 146
                + +D P+ +  +R
Sbjct: 560 F--LEVFIDTPLSVAEER 575


>gi|229146221|ref|ZP_04274596.1| hypothetical protein bcere0012_33660 [Bacillus cereus BDRD-ST24]
 gi|228637280|gb|EEK93735.1| hypothetical protein bcere0012_33660 [Bacillus cereus BDRD-ST24]
          Length = 195

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 25/164 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+R  + V     P   P  E  + + L     E     
Sbjct: 8   ISLQGPMASGKTTL----AKRLERCGFSVIY-ENP--YPIVEKRKRLKLDMNSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F A +   +E  I+     +G +++ DR       +        G+    ++   D
Sbjct: 57  ----FIANQKMFIEAKIKDFQNAKGSVVIFDRGPEDIEFYTLFYPMVIGKEWDIENELKD 112

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L ++  +E   D    LD+       R  N  +   S   + F
Sbjct: 113 ELYKL--RECRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154


>gi|159898271|ref|YP_001544518.1| adenylylsulfate kinase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159891310|gb|ABX04390.1| Adenylyl-sulfate kinase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 184

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M+ G  I F G+ GAGK+T  + L   L+ +   V
Sbjct: 1  MSQGYIIWFTGLSGAGKSTIAAALAEVLREREQRV 35


>gi|297619379|ref|YP_003707484.1| signal recognition particle-docking protein FtsY [Methanococcus
           voltae A3]
 gi|297378356|gb|ADI36511.1| signal recognition particle-docking protein FtsY [Methanococcus
           voltae A3]
          Length = 399

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT IS L   L++  + + +    G T  A A     L    +    + 
Sbjct: 195 IIFLGINGTGKTTSISKLAYKLKQNGHSIVMAA--GDTFRAGAIEQ--LEEHANNLEVKV 250

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + I+ A  +   ++L D            R ++    +  +++  V
Sbjct: 251 IKHQKGADSAAVIFDAIQHAKAKKIDVVLAD---------TAGRQTTNINLMSEIKK-VV 300

Query: 126 QEVMPDCTII 135
           +   PD  + 
Sbjct: 301 RVTKPDLVVF 310


>gi|282891793|ref|ZP_06300274.1| hypothetical protein pah_c197o112 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498377|gb|EFB40715.1| hypothetical protein pah_c197o112 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 191

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 61/209 (29%), Gaps = 35/209 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   GI GAGK+T    L + L                         L     DE     
Sbjct: 9   IGISGISGAGKSTLTKRLAKTLNA---------------------TALFWDDFDEISQGP 47

Query: 67  EAIVFAAARLDHVENVIRPALM-------EGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E  V       + ++ I   L         G+ ++C     +               L  
Sbjct: 48  EDYVHWFETSHNYDDWIYDDLAATLKVLKRGQTIVC---PATKKELIPTPYILFDAPLGY 104

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
               + Q +  D  I LD P DI L R   R   R    L     +      K R +FL 
Sbjct: 105 CHHATGQHI--DFLICLDTPPDIALARRLLR-DYRSQDNLQRVLNELEGYLLKSRPLFL- 160

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A  + +   ++D + S        L  +
Sbjct: 161 LAPEEKECDLMIDGSLSLDEQEARALKFL 189


>gi|289581485|ref|YP_003479951.1| signal recognition particle-docking protein FtsY [Natrialba magadii
           ATCC 43099]
 gi|289531038|gb|ADD05389.1| signal recognition particle-docking protein FtsY [Natrialba magadii
           ATCC 43099]
          Length = 470

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 17/155 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L R+ + + Y   +    G T  A A   +      +    + 
Sbjct: 276 IIFTGVNGVGKTTSIAKLSRYFEERGYSTVMA--NGDTYRAGANEQI--QEHANALDTKL 331

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + + +  A      ++L D            R  +    +D L++I  
Sbjct: 332 ITHEQGGDPAAVLYDAVEYAEANDVDVVLGD---------TAGRLHTDEGLMDQLEKID- 381

Query: 126 QEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158
           + V PD T+ +D  +     + R +   +  E   
Sbjct: 382 RVVDPDMTLFVDEAVAGQDAVNRAREFNNAAEIDG 416


>gi|158312695|ref|YP_001505203.1| adenylate kinase [Frankia sp. EAN1pec]
 gi|158108100|gb|ABW10297.1| adenylate kinase [Frankia sp. EAN1pec]
          Length = 218

 Score = 42.3 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 73/237 (30%), Gaps = 73/237 (30%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDEFGA 64
              G++G+GK T   L+   L   +  V  V R      T      R ++ S  +     
Sbjct: 5   VIMGVQGSGKGTQAKLMADELDLVHISVGDVFRWNVQNHTKIGAQVRRIVASGHLVGD-- 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                       D VE+V+R  L E       + D F  +  A Q E           L+
Sbjct: 63  ------------DLVESVVRTRLTEHDWNYGFIIDGFPRN--ARQAEF---------FLE 99

Query: 122 EISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFERKDV--------- 167
              +        I LDLP +     +  +R+ +R  L  +      + +D          
Sbjct: 100 SYDIDG-----VIYLDLPDEEVVRRVLARRLCSRCGLDYNLIASRPQIEDTCDVCGGALV 154

Query: 168 ---------------MIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
                            H K R   +IF        ++  +VD+  S   V   I +
Sbjct: 155 TRSDDNPEALAVRLSEYHAKTRPVMEIFQR-----KEQVAVVDARRSVLEVQAEIRD 206


>gi|323343517|ref|ZP_08083744.1| deoxynucleoside kinase [Prevotella oralis ATCC 33269]
 gi|323095336|gb|EFZ37910.1| deoxynucleoside kinase [Prevotella oralis ATCC 33269]
          Length = 210

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 34/197 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I+  G  G+GKTT  ++L ++              G  P  E    +  LS    +    
Sbjct: 3   IAIAGNIGSGKTTLTTMLAKY-------------YGWIPRFEPVDVNPYLSDYYKDISRW 49

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--------FLDSSYAYQGERDSSQHLFL 117
           +   +          ++I  +      ++ DR        F  ++ A     D     ++
Sbjct: 50  S-FNMEIYFLKQRFNDLIEISHST-DTVIQDRSIFEGVYVFTATNKAMGNLSDRDYQTYM 107

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQI 176
           D    + +   +PD  I L   V   +  +Q R           +E++  +   E   + 
Sbjct: 108 DLFDSMMMIVNLPDLMIYLRASVPTLVANIQKRGRD--------YEQEMKLEYLENLNKR 159

Query: 177 FLD-IARNQPDRCHIVD 192
           + D I      R  ++D
Sbjct: 160 YEDFIFDKYKGRLLVID 176


>gi|300868394|ref|ZP_07113019.1| Guanylate kinase [Oscillatoria sp. PCC 6506]
 gi|300333612|emb|CBN58207.1| Guanylate kinase [Oscillatoria sp. PCC 6506]
          Length = 186

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 26/175 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M +G  I   G  G GK T +  L +   +    V   TR P          + +     
Sbjct: 1   MTNGRLIVLTGPSGVGKGTLVRSLLQRHSQLYLSVSVTTRSPREGEIEGKHYYFVSRSKF 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVI---RPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            +     E + +A    +     I   +  + EGK+++                  +   
Sbjct: 61  LQMVEAGELLEWAEFAGNLYGTPIESVKQGIQEGKLVVL---------------EIELEG 105

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
              +++   + +     I + LP   D   +R+++R    E A     +R    I
Sbjct: 106 ARQIRDTFPEALR----IFI-LPPSWDELERRLRSRGQDSEDAIARRLQRAKEEI 155


>gi|297527189|ref|YP_003669213.1| protein of unknown function ATP binding protein [Staphylothermus
           hellenicus DSM 12710]
 gi|297256105|gb|ADI32314.1| protein of unknown function ATP binding protein [Staphylothermus
           hellenicus DSM 12710]
          Length = 261

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 12/100 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDV----------HVTREPG-GTPAAEAARHVL 54
           +I   G  G+GKTT  S L+ +L     D            +  +P        +AR V+
Sbjct: 4   YIVVLGTAGSGKTTLASALQDYLINNGMDATIVNLDPAVEILPYKPDIDAREYVSAREVM 63

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
            + G+   GA   A+   A R++ ++  +  +L    I+L
Sbjct: 64  RTHGLGPNGALIAAVDMLALRIEELKEEVW-SLKSNYIIL 102


>gi|169342674|ref|ZP_02863715.1| guanylate kinase [Clostridium perfringens C str. JGS1495]
 gi|170763962|ref|ZP_02636244.2| guanylate kinase [Clostridium perfringens B str. ATCC 3626]
 gi|182420488|ref|ZP_02642660.2| guanylate kinase [Clostridium perfringens NCTC 8239]
 gi|182625823|ref|ZP_02953589.1| guanylate kinase [Clostridium perfringens D str. JGS1721]
 gi|169299180|gb|EDS81250.1| guanylate kinase [Clostridium perfringens C str. JGS1495]
 gi|170711315|gb|EDT23497.1| guanylate kinase [Clostridium perfringens B str. ATCC 3626]
 gi|177908857|gb|EDT71349.1| guanylate kinase [Clostridium perfringens D str. JGS1721]
 gi|182380893|gb|EDT78372.1| guanylate kinase [Clostridium perfringens NCTC 8239]
          Length = 215

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          V   TR P          H L      
Sbjct: 8   NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRNPRVGEVDGVNYHFLTKEEFK 67

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +  AE + +       +H E          + +   L EGK ++                
Sbjct: 68  QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 105

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
                    ++E +          I  LP   +   +R+  R S    + +  F+     
Sbjct: 106 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 156

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200
                   + +I         +V     D+    +++
Sbjct: 157 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 186


>gi|18653827|ref|NP_570761.1| thymidine kinase [Macacine herpesvirus 5]
 gi|4494925|gb|AAD21347.1| thymidine kinase [Macaca mulatta rhadinovirus 17577]
          Length = 557

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLL 55
            +   I  EG+ G GKTT ++ +   + ++N  V    EP        +   +  R ++ 
Sbjct: 228 RNAFLIYLEGVMGVGKTTLLNSMTGMVPQEN--VLSCPEPMKFWTCVYSNCLKEQRSIVK 285

Query: 56  SCGVDEFGAEAEAI-------VFAAARLDHVENVIRPAL-MEGK-----ILLCDRFLDSS 102
                +    A          +   A    +   ++P L   G       ++ DR L S+
Sbjct: 286 QGTHGKLITSARVYACQSKFALPFRATAAGIGRNLQPWLVGNGSTKPANWIVFDRHLLSA 345

Query: 103 -----YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                  +      +       L   S  +   D  ++L L      +R+Q+R    E  
Sbjct: 346 TVVFPLVHVKYNRLTPDHLFQILSLFSAHDG--DVVVLLTLNSSEAHRRIQSRGRKEEKG 403

Query: 158 -CLDYFERKDVMIH 170
              +Y  +     H
Sbjct: 404 ITQNYLRQVAWAYH 417


>gi|325117024|emb|CBZ52577.1| putative adenylate kinase [Neospora caninum Liverpool]
          Length = 371

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 34/147 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGAEAEAI 69
           G   +GK T  +LLK  L                   +  R V    G   E GA  +A 
Sbjct: 138 GPPCSGKGTLAALLKEKLGML-----------HCSTGDLLRQVAKEEGEKSEVGAAMKAG 186

Query: 70  VFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                R+  +  V++ A+ +      K ++ D F                  +D L+E+ 
Sbjct: 187 KLVNDRV--IVRVLQDAMAKNAKAECKGIILDGF------------PRNGAQVDVLREM- 231

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY 151
             ++ PD + ++++P +  L+R+  R 
Sbjct: 232 --KLWPDVSFLINVPHETLLRRMAARR 256


>gi|195110359|ref|XP_001999749.1| GI22905 [Drosophila mojavensis]
 gi|193916343|gb|EDW15210.1| GI22905 [Drosophila mojavensis]
          Length = 197

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 59/216 (27%), Gaps = 57/216 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  S +    Q +              A +  R      G +          
Sbjct: 13  GGPGAGKGTQCSKIVERFQFE-----------HLSAGDLLREERSREGSE---------- 51

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125
                      +I   +  GKI+   +      S      +        +D     + ++
Sbjct: 52  --------YGQLIEEYIRNGKIVPVEV----TCSLLENAMKNSGKSRFLIDGFPRNQDNL 99

Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                 M D T     +  D   D+ +KR   R         D  E       +KR Q +
Sbjct: 100 DGWNRQMSDKTEMQFVLFFDCAEDVCVKRCLGRGQSGSGRSDDNMES-----LKKRIQTY 154

Query: 178 ----LDIAR--NQPDRCHIVDSAHSFQSVATNILNI 207
               L I +      +   +D++     V   +  +
Sbjct: 155 NNDSLPIIKYFENAGQVKRIDASPDADKVFQEVERV 190


>gi|157364897|ref|YP_001471664.1| deoxynucleoside kinase [Thermotoga lettingae TMO]
 gi|157315501|gb|ABV34600.1| deoxynucleoside kinase [Thermotoga lettingae TMO]
          Length = 219

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 64/212 (30%), Gaps = 44/212 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVDEFG 63
           I  EG  GAGKT  + +L+   + K          G    ++     +L         + 
Sbjct: 4   IVVEGTVGAGKTALVEILE---KEKGMT-------GFYEMSDDLADAILERYYADKSRWC 53

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----------QGERDSSQ 113
              E        L      +R A    K +  DR +     +          Q       
Sbjct: 54  LTMELYFLHKRFLQ-----VRSANQTHKAV-MDRSMMGDLVFVRMQKQLGFLQPIEYKVY 107

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER----KDVM 168
             F  ++ EI      P   I +   V   L+R++ R    E      Y+E+     D  
Sbjct: 108 ESFFRTMSEI---SPTPRLLIYIKCSVKTALERIEKRGRAYEINVEKSYWEQLCQFYDEA 164

Query: 169 IHEKRRQIFL-------DIARNQPDRCHIVDS 193
             E      L       D   N+ DR  ++D+
Sbjct: 165 FMEFHNGNVLIINGDEIDFVENESDRALVLDA 196


>gi|95929494|ref|ZP_01312237.1| cytidylate kinase [Desulfuromonas acetoxidans DSM 684]
 gi|95134610|gb|EAT16266.1| cytidylate kinase [Desulfuromonas acetoxidans DSM 684]
          Length = 227

 Score = 42.3 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          MNS L I+ +G  GAGK+T   LL + L   N D
Sbjct: 1  MNSKLIIAIDGPSGAGKSTLSRLLSQQLNYINID 34


>gi|116791464|gb|ABK25989.1| unknown [Picea sitchensis]
          Length = 174

 Score = 42.3 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 28/123 (22%)

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----ERKDVMIHEKRRQIF---- 177
            + PD  I+LD+P +I ++RV  R     +  + +      E +++    +  Q F    
Sbjct: 49  GIRPDLFILLDVPDEILVERVVGRRLDPVTGKIYHLKYSPPETEEIA--RRLTQRFDDTE 106

Query: 178 --------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL---VQKRVSPLS 220
                          D+  N  +    VD     + V   I   + EL   ++++ + + 
Sbjct: 107 EKVKLRLKTHHKNLEDVLSNFTNLIWKVDGNRPKEQVFAEIDAAIAELERKLERKQTEVK 166

Query: 221 SKK 223
           +K 
Sbjct: 167 AKA 169


>gi|157736797|ref|YP_001489480.1| guanylate kinase [Arcobacter butzleri RM4018]
 gi|315635977|ref|ZP_07891238.1| guanylate kinase [Arcobacter butzleri JV22]
 gi|157698651|gb|ABV66811.1| guanylate kinase [Arcobacter butzleri RM4018]
 gi|315479761|gb|EFU70433.1| guanylate kinase [Arcobacter butzleri JV22]
          Length = 205

 Score = 42.3 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 4/99 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  +   G  G GK+T +  + + +    + +   TREP            +     +
Sbjct: 4   KKGAILIISGPSGCGKSTLLKEVYKNISDYYFSISTTTREPRVGEVNGVDYFFVSKEEFE 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCD 96
           E       + +A    ++    ++P   AL EGK+++ D
Sbjct: 64  EDIKNGNFLEYAKVHDNYYGTSLKPIINALNEGKLVIFD 102


>gi|118085134|ref|XP_417173.2| PREDICTED: similar to dynein cytoplasmic heavy chain 2 [Gallus
            gallus]
          Length = 4301

 Score = 42.3 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +LK  L +    V   T  P   P     RH LL     +    
Sbjct: 1972 VVIVGPSGAGKSTLWQMLKAALGKTGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2026

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2027 SDGVLTNSAR-----QVVREPQGTTSWIICD-------------GDIDPEWIESLNSV 2066


>gi|225872808|ref|YP_002754265.1| adenylyl-sulfate kinase [Acidobacterium capsulatum ATCC 51196]
 gi|225793790|gb|ACO33880.1| adenylyl-sulfate kinase [Acidobacterium capsulatum ATCC 51196]
          Length = 315

 Score = 42.3 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 17/86 (19%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M  G  +   G+ G+GKTT       FL+ +   V                  +L     
Sbjct: 19 MKKGKVVWMTGLSGSGKTTLCRAASAFLRARGEQVQ-----------------ILDGDEL 61

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPA 86
            G  ++     A R++++      A
Sbjct: 62 RKGLSSDLCFSIADRMENIRRTAELA 87


>gi|167043737|gb|ABZ08429.1| putative SRP54-type protein, GTPase domain protein [uncultured
           marine crenarchaeote HF4000_APKG3B16]
          Length = 441

 Score = 42.3 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 17/127 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT  S L RFL ++ Y V V       P A    R +     V+ +G E    
Sbjct: 106 GIQGSGKTTVASKLARFLSKQGYRVGVIGADTFRPGALVQLRTMCEKSDVEVYGDEK--- 162

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                    V+N ++        I+L D            R   +   LD +++I+    
Sbjct: 163 --NKDSPQVVKNGLKHFESSNLDIILID---------TAGRHKEEKDLLDEMKQINKAA- 210

Query: 129 MPDCTII 135
            PD  ++
Sbjct: 211 SPDLALL 217


>gi|13431656|sp|Q9RS38|KGUA_DEIRA RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
          Length = 239

 Score = 42.3 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 77/230 (33%), Gaps = 52/230 (22%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSC 57
            GL I   G  G GK T      R+L     DV       TREP          +V +S 
Sbjct: 18  RGLLIVVTGASGVGKGTLRE---RWL--AGQDVFYSTSWTTREPRPGEVNGR-DYVFVSP 71

Query: 58  GVDEFGAEAEAIVFAAARL-DHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                 A+    +  A  + +H    I P   AL  G+ ++ +  ++   A Q +    +
Sbjct: 72  AEFLAKAQQNGFLEHAQFVGNHYGTPIEPIEAALERGQDVVLE--IEVEGAMQVKDRMGE 129

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
                                I  +P    L  ++ R + R +   +  E++      + 
Sbjct: 130 QAI---------------LVFI--MPP--SLTELRRRLTGRATETPERIEKR----LTRA 166

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           R    +I      R  IV+          N+   V EL+  + +  +++K
Sbjct: 167 RD---EIQAAHDFRYVIVN---------DNLDRAVSELLAVQQAERAAQK 204


>gi|228475285|ref|ZP_04060010.1| deoxypurine kinase [Staphylococcus hominis SK119]
 gi|314937115|ref|ZP_07844462.1| deoxynucleoside kinase family protein [Staphylococcus hominis
           subsp. hominis C80]
 gi|228270750|gb|EEK12159.1| deoxypurine kinase [Staphylococcus hominis SK119]
 gi|313655734|gb|EFS19479.1| deoxynucleoside kinase family protein [Staphylococcus hominis
           subsp. hominis C80]
          Length = 220

 Score = 42.3 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 48/164 (29%), Gaps = 28/164 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L   L  +      + E           +  L    ++F   +
Sbjct: 12  ITIAGTVGVGKSTLTQALADKLNFR-----TSFENVD-------HNPYLDKFYNDFERWS 59

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117
             +   F A R        +     G   + DR +      +A     QG          
Sbjct: 60  FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMSKEDFKTY 115

Query: 118 DSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
             L E   ++     PD  I LD   D  + R+  R    E   
Sbjct: 116 SELFEAMVMTPYFPKPDVLIYLDCDYDEVIDRIHQRGRDMEMNT 159


>gi|312143919|ref|YP_003995365.1| guanylate kinase [Halanaerobium sp. 'sapolanicus']
 gi|311904570|gb|ADQ15011.1| guanylate kinase [Halanaerobium sp. 'sapolanicus']
          Length = 192

 Score = 42.3 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 57/178 (32%), Gaps = 28/178 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           MN G+     G  G GK T +  L +     +Y V   TRE             +     
Sbjct: 1   MNKGILFVLSGPSGVGKNTVLDELFKEFDGVSYSVSATTREARNGEIEGEDYFFISEDKF 60

Query: 60  DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
            E  A+    + +A    H     +  +   L EG+ ++ +  +D+  A Q         
Sbjct: 61  KEISAD-NGFIESALVHGHYYGTPKKFVDKKLSEGEDIILE--IDTQGAKQ--------- 108

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                    V+E  PD   I  LP   +    R+  R S    A     E     + E
Sbjct: 109 ---------VREKYPDAVYIFLLPPSLEELEHRLDKRGSENNKAKNIRLENARKELKE 157


>gi|256544527|ref|ZP_05471900.1| adenylate kinase [Anaerococcus vaginalis ATCC 51170]
 gi|256399852|gb|EEU13456.1| adenylate kinase [Anaerococcus vaginalis ATCC 51170]
          Length = 214

 Score = 42.3 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 54/235 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   G  GAGK T    L + L        D+  T     TP    A+   ++ G     
Sbjct: 3   IILLGPPGAGKGTQAEKLIKELDAVQISTGDIFRTNIKNNTPLGAKAKE-YMNKGQLVPD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                +V      D ++ V      +GK +L D F  +    Q E         D   +I
Sbjct: 62  ELTIDLV-----WDALDKV-----EDGKSILLDGFPRNIT--QAEALDEGMQKRD--NKI 107

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY------------------SLRESACLDYFERK 165
                  D  I +++P D+ ++R+  R                      +    +   ++
Sbjct: 108 -------DKVININVPEDVIIERISGRRVNVSTGKVYHIKFNPPKVEGIDDETGEKLIQR 160

Query: 166 DVMIHEKRRQIFLDIARNQ----------PDRCHIVDSAHSFQSVATNILNIVWE 210
           +       ++  LD+                    +D A + + V   I+  + +
Sbjct: 161 EDDTEAAVKER-LDVYNKHTSVLIDYYNKKGILVTIDGAKTPEEVFDQIIKSLEK 214


>gi|219849866|ref|YP_002464299.1| nucleoside-triphosphate--adenylate kinase [Chloroflexus aggregans
           DSM 9485]
 gi|219544125|gb|ACL25863.1| Nucleoside-triphosphate--adenylate kinase [Chloroflexus aggregans
           DSM 9485]
          Length = 222

 Score = 42.3 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 39/158 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L                     + +  R  L         A++    
Sbjct: 8   GPPGAGKGTQAKTLADR-----------TGLTHVASGDLFRAALREGTELGMLAKS---- 52

Query: 71  FAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               R + V          E + +P    G  ++ D F  +    Q +  + +       
Sbjct: 53  -YMDRGELVPDEVVIRMILERIRQPDCASG--VIFDGFPRT----QDQARALE------- 98

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           + ++      D  + L +P ++ L+R+  R + R    
Sbjct: 99  EALAKDGARIDAVLFLAVPQEVLLRRIAGRQTCRTCGA 136


>gi|319953645|ref|YP_004164912.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Cellulophaga algicola DSM 14237]
 gi|319422305|gb|ADV49414.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Cellulophaga algicola DSM 14237]
          Length = 381

 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 60/191 (31%), Gaps = 22/191 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKTT  S +      K         P      E             F  E
Sbjct: 180 FIAIEGNIGAGKTTLASRISDDFNAKLILERFADNPFLPKFYE-------DQARYAFPLE 232

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124
                F A R     +      +    ++ D  +  S  +       +   L   +    
Sbjct: 233 MS---FLAERYQQFTDDTSQFDLFKSFMVSDYDIFKSLIFAKVTLQEEEFKLYRKVFNFM 289

Query: 125 VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
            +EV  P   + L    +  L+ ++ R    E     DY E        K  + +LD  +
Sbjct: 290 HKEVKKPGLYVYLYQNTERLLENIKKRDRDYEQNIPPDYLE--------KINRGYLDFIK 341

Query: 183 NQPD-RCHIVD 192
           + PD    IVD
Sbjct: 342 SAPDHNTLIVD 352


>gi|257865737|ref|ZP_05645390.1| adenylylsulfate kinase [Enterococcus casseliflavus EC30]
 gi|257872072|ref|ZP_05651725.1| adenylylsulfate kinase [Enterococcus casseliflavus EC10]
 gi|257799671|gb|EEV28723.1| adenylylsulfate kinase [Enterococcus casseliflavus EC30]
 gi|257806236|gb|EEV35058.1| adenylylsulfate kinase [Enterococcus casseliflavus EC10]
          Length = 178

 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 67/213 (31%), Gaps = 50/213 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGV 59
           M  G  I   G+  +GKTT +  L R        +          P+A +  + L     
Sbjct: 1   MKKGKVIVVSGVTASGKTTLVRELSRL--ADGIVISFDDYSIDALPSAPSFDYFLQDPRA 58

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                +   ++    R   +  +I              F+D  + Y       +H  L  
Sbjct: 59  AINQYDISLLLKDLKRAMLLYPII--------------FVDFPFGY-------EHQDLRQ 97

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFE---RKDVMIHE 171
           L          D  I L  P+DI   R   R    ES  +     D +    R+  ++HE
Sbjct: 98  LI---------DTVIYLKTPLDIAFARQIKRDYTNESKEVILTWADTYLSYARELFVLHE 148

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204
           +       IA       +++D A     +A  +
Sbjct: 149 QI------IAETAD---YVLDGARPADQLAEQV 172


>gi|239626790|ref|ZP_04669821.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516936|gb|EEQ56802.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 614

 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 14/98 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-------NYDVH-VTREPGGTPAAEAARH 52
           +++G  I+  G  GAGKTT + LL RF +          +++   TR    +      + 
Sbjct: 397 IHAGQTIAIVGPTGAGKTTVVKLLMRFYELNSGSIFIDGHNILDFTRNGLRSVFGMVLQE 456

Query: 53  VLLSCGVDEFG------AEAEAIVFAAARLDHVENVIR 84
             L               + +  V AAAR  H +  IR
Sbjct: 457 TWLYSASIMDNIRYGNFDKTDEEVMAAARTAHCDEFIR 494


>gi|222109202|ref|YP_002551467.1| sulfate adenylate transferase subunit 1 [Agrobacterium vitis S4]
 gi|221738476|gb|ACM39341.1| sulfate adenylate transferase subunit 1 [Agrobacterium vitis S4]
          Length = 636

 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +LL++ L  +                      LL       G   + 
Sbjct: 459 FTGLSGAGKSTIANLLEKRLHARGQH-----------------SYLLDGDNLRHGLNYDL 501

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILL 94
              AA R++++  V   A      G I++
Sbjct: 502 GFKAADRVENIRRVTEVARLMADAGLIVI 530


>gi|288919267|ref|ZP_06413603.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f]
 gi|288349362|gb|EFC83603.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f]
          Length = 640

 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 34/144 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  + +  +                 LL       G   + 
Sbjct: 466 FTGLSGAGKSTIANLVEKRLHDQGFHTY-----------------LLDGDNVRHGLNKDL 508

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +  +  G I+L      S  +            L + + I  
Sbjct: 509 GFTDADRVENIRRVAEVAKLMVDAGTIVLA-----SFISPFRAERQMARELLGAGEFIE- 562

Query: 126 QEVMPDCTIILDLPVDIGLKRVQN 149
                   I +D P+ +   R + 
Sbjct: 563 --------IFVDTPLSVAESRDRK 578


>gi|229823515|ref|ZP_04449584.1| hypothetical protein GCWU000282_00813 [Catonella morbi ATCC 51271]
 gi|229786959|gb|EEP23073.1| hypothetical protein GCWU000282_00813 [Catonella morbi ATCC 51271]
          Length = 230

 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 72/239 (30%), Gaps = 62/239 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    L      K+Y +            +  R  + +       A+A    
Sbjct: 18  GLPGAGKGTQSERLV-----KDYQIVHI------ATGDIFRAAIQNETPLGLQAKAYTDN 66

Query: 71  FAAARLDHVENVIRPALMEGKI----LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                 +    ++R  L +  +     + D +  +S   Q +      + L+S       
Sbjct: 67  GNLVPDEVTNAIVRERLAQDDVKAQGFMLDGYPRTSA--QAQALDQNLVELNS------- 117

Query: 127 EVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL--------------------DYFERK 165
              P    I +D+  ++   R+  R   R                         D+++R+
Sbjct: 118 ---PIHAVIYIDVDPEVLKDRLSGRIICRNCGATYHKLYNPPKVEGVCDNCGASDFYQRE 174

Query: 166 DVMIHEKRRQIFLDIARNQPDR-----------CHIVDSAHSFQSVATNILNIVWELVQ 213
           D    EK    +    + +  R            + VD   +   V  +I  I+  + Q
Sbjct: 175 D-DKPEKV--AYRINLQMESIRPILDYYEERGLLYRVDGQQAIDKVYEDIRQILSSVAQ 230


>gi|148726390|emb|CAN88185.1| cytidylate kinase [Danio rerio]
          Length = 220

 Score = 42.3 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190
            +  D   ++ + R   R         +    E++     +  R I +++   Q  +   
Sbjct: 141 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 198

Query: 191 VDSAHSFQSVATNILNIVWE 210
           +D++ S   V  ++ NI+ +
Sbjct: 199 IDASRSVDEVFADVKNILEK 218


>gi|331664599|ref|ZP_08365505.1| hypothetical ATP-binding protein YghR [Escherichia coli TA143]
 gi|331058530|gb|EGI30511.1| hypothetical ATP-binding protein YghR [Escherichia coli TA143]
          Length = 252

 Score = 42.3 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLVIDIDTAISR 193


>gi|163847944|ref|YP_001635988.1| adenylate kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222525824|ref|YP_002570295.1| adenylate kinase [Chloroflexus sp. Y-400-fl]
 gi|163669233|gb|ABY35599.1| Adenylate kinase [Chloroflexus aurantiacus J-10-fl]
 gi|222449703|gb|ACM53969.1| Adenylate kinase [Chloroflexus sp. Y-400-fl]
          Length = 222

 Score = 42.3 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 48/159 (30%), Gaps = 39/159 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L                     + +  R  L         A++    
Sbjct: 8   GPPGAGKGTQAKTLADR-----------TGLTHVASGDLFRAALREGTELGMLAKS---- 52

Query: 71  FAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               R + V          E + +P    G  ++ D F  +    Q +  + +    D  
Sbjct: 53  -YMDRGELVPDEVVIRMILERIQQPDCASG--VIFDGFPRT----QEQARALEVALADHN 105

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
             I       D  + L +P D+ L+R+  R + R    +
Sbjct: 106 ARI-------DAVLFLAVPQDVLLRRIAGRQTCRTCGAI 137


>gi|330798684|ref|XP_003287381.1| hypothetical protein DICPUDRAFT_32350 [Dictyostelium purpureum]
 gi|325082648|gb|EGC36124.1| hypothetical protein DICPUDRAFT_32350 [Dictyostelium purpureum]
          Length = 273

 Score = 42.3 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 36/148 (24%), Gaps = 43/148 (29%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   GI  +GK+     L     +    V +  E            +L++       + 
Sbjct: 3   LIVLSGIPSSGKSQRAKDLYDHFTQMGKKVVIISEET----------LLINKNEGYKDSL 52

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGERDSSQHLFL 117
            E           ++  I   L +  +++ D        R+     A             
Sbjct: 53  TE-----KMTRGSLKAAIERNLNKETVVISDSLNYIKGYRYELFCIARAAGTRL------ 101

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLK 145
                           I  D P D+  +
Sbjct: 102 --------------LVIYCDTPRDVSKQ 115


>gi|322830507|gb|EFZ33506.1| adenylate kinase, putative [Trypanosoma cruzi]
          Length = 260

 Score = 42.3 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 74/242 (30%), Gaps = 75/242 (30%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T    +          V          + +  R  +      E G  A
Sbjct: 52  IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--------D 118
           E  +       H   ++       KI++      +      + D  +  +L        D
Sbjct: 99  ETFI-------HNGEMV-----PNKIVIS-----AVRKRLEQDDVKERGWLLDGFPRSQD 141

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYF 162
             + +    ++P   ++L++P  I ++R++NR +   +  +                +  
Sbjct: 142 QAEALESSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERL 201

Query: 163 ERKDVM-----------IHEK---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            ++D              HEK    R+ +  +          ++   S  +V   +L +V
Sbjct: 202 IQRDDDHRETVEARLRIYHEKLHGLREHYGTLVE-------TINGDQSIHAVTEGVLAVV 254

Query: 209 WE 210
             
Sbjct: 255 ER 256


>gi|317056473|ref|YP_004104940.1| guanylate kinase [Ruminococcus albus 7]
 gi|315448742|gb|ADU22306.1| guanylate kinase [Ruminococcus albus 7]
          Length = 216

 Score = 42.3 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 78/225 (34%), Gaps = 45/225 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I      G GK T +       +        TREP        + H + +   ++  A
Sbjct: 10  KLIIVSAPSGCGKGTIMEKAFDRDEVFYSVSCTTREPRPGEIDGKSYHFITTEEFEKMIA 69

Query: 65  EAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           E   + +A     +    +  +   L  GK ++ +  +++  A+Q               
Sbjct: 70  EDSFLEYAKYNQTYYGTPKKPVEENLAAGKDVILE--IETQGAFQ--------------- 112

Query: 122 EISVQEVMPDC-TIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              V+++ PD  T+ + LP  +    +R+  R + +E             I  +  Q   
Sbjct: 113 ---VKKIRPDANTLFI-LPPSVAELDRRLHKRATEKEE-----------TIKRRVSQAAG 157

Query: 179 DIARNQPDRCHI----VDSA-HSFQSVATNILNIVWELVQKRVSP 218
           +IA+       I    +D+A   F++V   I  +    V  R SP
Sbjct: 158 EIAKADKYDYVIMNDDLDAAIDDFKAVIDGIRGVKEPAV--RFSP 200


>gi|194381996|dbj|BAG64367.1| unnamed protein product [Homo sapiens]
          Length = 188

 Score = 42.3 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 14/131 (10%)

Query: 93  LLCDRFLDSSYAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRV 147
           +  DR++ +S  Y+ E  +     +     D +     Q +  D  I L    +  L R+
Sbjct: 58  VYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRI 117

Query: 148 QNRYSLRESA-CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201
             R    E    L+Y E+     +  ++H   +  F D  +  P     +D    F+   
Sbjct: 118 YLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKY 174

Query: 202 TNILNIVWELV 212
            +++  V E +
Sbjct: 175 ESLVEKVKEFL 185


>gi|62185147|ref|YP_219932.1| adenylate kinase [Chlamydophila abortus S26/3]
 gi|81312689|sp|Q5L5W0|KAD_CHLAB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|62148214|emb|CAH63972.1| adenylate kinase [Chlamydophila abortus S26/3]
          Length = 213

 Score = 42.3 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 50/158 (31%), Gaps = 36/158 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHV 53
           M + +F    G  G+GK T    L   L+               +  P G  AAE     
Sbjct: 1   MLNKIFYIIMGPPGSGKGTQSQRLAHQLKLPHMSSGELFRSAIDSASPLGIKAAEYINQG 60

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           LL      +G   EA+              +P    G I+             G   +  
Sbjct: 61  LLVPDAIVWGMVQEALN-------------QPECQSGCII------------DGFPRTLD 95

Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQNR 150
              L  L +  +Q    D   I LD+  +  ++R+ +R
Sbjct: 96  QAIL--LNDFFMQSYA-DYRVIQLDVSNEEIIRRIHSR 130


>gi|315187138|gb|EFU20895.1| cytidylate kinase [Spirochaeta thermophila DSM 6578]
          Length = 172

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 58/217 (26%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           + ++  G  G G +T   ++   L  +  NY      +  G P  +  +    S   D +
Sbjct: 1   MIVAISGKSGCGNSTVSRMVAERLGLRWINYTFRNISQEQGVPFEQILKEAQESPRWDLY 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                           ++   +  L EG  +L  R                 ++L   + 
Sbjct: 61  ----------------LDERQKNLLQEGTCVLGSR---------------LAIWLAPPEA 89

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ---IFLD 179
                      + L  P+++  +R+Q R           FE       E+ R+    +L 
Sbjct: 90  FK---------VYLYAPLEVRARRIQKREGG-------RFEEILEETRERDRRDAGRYLA 133

Query: 180 IARNQPDRC-----HIVDSA-HSFQSVATNILNIVWE 210
           +     DR       ++D+   + + +   I+  V +
Sbjct: 134 LYGIDIDRYEEVADLVIDTTELTPEEITERIVAGVQK 170


>gi|218961740|ref|YP_001741515.1| Adenylate kinase (ATP-AMP transphosphorylase) [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730397|emb|CAO81309.1| Adenylate kinase (ATP-AMP transphosphorylase) [Candidatus
           Cloacamonas acidaminovorans]
          Length = 210

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 53/230 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI+G+GK T   LL      ++ ++      G     E  +   L   V    A+ 
Sbjct: 5   IVFLGIQGSGKGTQAELLAERTGFQHINI------GDLFREEVHKQTELGKKVQAIIAKG 58

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E +     + + V  ++  +L             +   + G   +        L+  +V+
Sbjct: 59  ELV-----QDELVFEIVNASLTAD---------CAGVVFDGFPRTLAQAE-YLLKNYNVR 103

Query: 127 EVMPDCTIILDLPVDIGLKRVQNR--------------YSLRESACLD--------YFER 164
                    L+L  +  + R++ R                 ++    D          + 
Sbjct: 104 -----RVYYLELNEEEAIARIEARRLCSSCGETYNILSKKPKQEGICDKCGSPLVQRTDD 158

Query: 165 KDVMIHEKRRQIFLDIAR-----NQPDRCHIVDSAHSFQSVATNILNIVW 209
               I E+ +  +           +      + +  S + +   I+N + 
Sbjct: 159 SGEAIRERVKAFYEQTFALKEYFAEKGLLKEISARKSIEEIQQEIINDLK 208


>gi|149641865|ref|XP_001511374.1| PREDICTED: similar to NADH dehydrogenase, partial [Ornithorhynchus
           anatinus]
          Length = 365

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 59/167 (35%), Gaps = 18/167 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-----------LL 55
           I+ +G   +GK+     L   L  +++          +      +++             
Sbjct: 79  ITVDGNLCSGKSKLAKGLAEKLGLRHFPEADVYYLDRSVGDGTIKNLDYGASSSLEVFYD 138

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109
           +    +  +         +RL    + +   L  G+ ++ +R + S + +      QG  
Sbjct: 139 NPRSSDGNSYRLQSWLYTSRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMFNQGYI 198

Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                   + ++ I++ E + P   I +D+PV    K++Q +    E
Sbjct: 199 RKQCVEHYNEVKRITICEYLPPHVAIYIDMPVPEVQKKIQEKGDPHE 245


>gi|290995188|ref|XP_002680197.1| predicted protein [Naegleria gruberi]
 gi|284093817|gb|EFC47453.1| predicted protein [Naegleria gruberi]
          Length = 202

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 63/208 (30%), Gaps = 38/208 (18%)

Query: 18  TTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLD 77
           TT    L   +      VH       +  A+          +  +    +  +       
Sbjct: 1   TTLAKALAEKI---GVGVHYEPVIDNSYLAD------FYSDMKTYSFRLQVYLLNKRFEQ 51

Query: 78  HVENVIRPALMEGKILLCDR--FLDSSYA-------YQGERDSSQHLFL-DSLQEISVQE 127
           H + +       G   + DR  + D+ +A          +RD   ++ L  ++ +     
Sbjct: 52  HQKIIWG---SNGG--VQDRTIYEDAIFAKVLMDTGMMEKRDYETYVSLFRNMSKFMKHN 106

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            M    I LD+  +  ++R++ R    ES          +   +K    + +        
Sbjct: 107 TM---IIHLDVSPETSMERIKMRGRECESGI-------TLEYLQKLHSGYEEWLTKISKI 156

Query: 188 CHIVDSA----HSFQSVATNILNIVWEL 211
             ++        S ++V   ++    ++
Sbjct: 157 IPVIKVNWSQFRSLENVLEEVMKAYNQI 184


>gi|291383983|ref|XP_002708584.1| PREDICTED: dynein, cytoplasmic 2, heavy chain 1 isoform 1
            [Oryctolagus cuniculus]
          Length = 4313

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  GAGK+T   +L+  L +    V   ++    P A     +L   G  +     
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALSKIGKVV---KQYTMNPKAMPKHQLL---GHIDMDTRE 2028

Query: 67   EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2029 WSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|146090934|ref|XP_001466398.1| dynein heavy chain [Leishmania infantum JPCM5]
 gi|134070760|emb|CAM69117.1| putative dynein heavy chain [Leishmania infantum JPCM5]
          Length = 4455

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G+GK+T +++L++ LQ    +V +       P A   R +L   G  +     
Sbjct: 2122 VVLVGPSGSGKSTLLNILRKALQTMQIEVPMHVM---NPKAMTRRRLL---GYMDADTRE 2175

Query: 67   EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++ AAAR     +V++        +LCD                   +++SL  +
Sbjct: 2176 WYDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2216


>gi|78044025|ref|YP_360320.1| guanylate kinase [Carboxydothermus hydrogenoformans Z-2901]
 gi|119371199|sp|Q3AC14|KGUA_CARHZ RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|77996140|gb|ABB15039.1| guanylate kinase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 204

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 28/169 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G+ +   G  GAGK T    +++      Y +   TRE           + +     
Sbjct: 1   MHKGMLVVVSGPSGAGKGTICQEIRKRNPNLFYSISATTREKRVGEIDGVHYYFIDRQQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           ++  A  E  +  A    +     +  +  AL  G+ ++                     
Sbjct: 61  EKMIANDE-FLEWADVYGNYYGTPKKPVFEALARGQDVIL---------------EIDIK 104

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYF 162
               +++   +        +  LP  I +  +R++ R + +E   +   
Sbjct: 105 GARQVKKTYPEG-----VFVFILPPSISILEERLRKRGTDKEEIIVKRM 148


>gi|73980035|ref|XP_532914.2| PREDICTED: similar to XPA binding protein 1 isoform 1 [Canis
           familiaris]
          Length = 288

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|73980010|ref|XP_850503.1| PREDICTED: similar to XPA binding protein 1 isoform 1 [Canis
           familiaris]
          Length = 374

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|73980018|ref|XP_861696.1| PREDICTED: similar to XPA binding protein 1 isoform 6 [Canis
           familiaris]
          Length = 288

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|73980027|ref|XP_850597.1| PREDICTED: similar to XPA binding protein 1 isoform 2 [Canis
           familiaris]
          Length = 374

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|18977417|ref|NP_578774.1| adenylate kinase [Pyrococcus furiosus DSM 3638]
 gi|22653803|sp|Q8U207|KAD_PYRFU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|18893108|gb|AAL81169.1| adenylate kinase (adk) [Pyrococcus furiosus DSM 3638]
          Length = 220

 Score = 42.3 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 71/226 (31%), Gaps = 50/226 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK+T    +                     + +  R  +        G E +A +
Sbjct: 7   GPPGSGKSTQARRIVER-----------YGLTYISSGDLIRKEI--AEGTPLGREMQAYL 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
              AR D + + I        +++   R +   +   G   +     +     +    + 
Sbjct: 54  ---ARGDLIPDTIV-----NTLIISKLRRVRKDFIMDGYPRT-PEQVIALENYLYDHGIK 104

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------------RKDV--M 168
            D  I + + ++  ++RV  R    +   + + E                   R+D    
Sbjct: 105 IDVAIDIYVSLEESIRRVSGRRICPKCGAVYHVEFNPPKIPGRCDVCGAELVQREDDRPE 164

Query: 169 IHEKRRQIFLDIAR-----NQPDRCHI-VDSAHSFQSVATNILNIV 208
           + EKR +I++          Q  R ++ ++   +   V   I  ++
Sbjct: 165 VVEKRYRIYMKNMEPIIKFYQKQRIYVKINGHGNIDEVWERIRPLL 210


>gi|282882033|ref|ZP_06290674.1| guanylate kinase [Peptoniphilus lacrimalis 315-B]
 gi|281298063|gb|EFA90518.1| guanylate kinase [Peptoniphilus lacrimalis 315-B]
          Length = 205

 Score = 42.3 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 71/231 (30%), Gaps = 43/231 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G  +   G  G+GK T    + +  +   +     TR P            +     
Sbjct: 1   MSGGFLLVLSGPSGSGKGTVSQAIMKENKEIIFSTSVTTRTPRPGEVNGENYFFVSKTKF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++   + E +  A    ++    +  +   + +G+I+L +  +D   A Q ++   +   
Sbjct: 61  EQMVEKDELLEHAFVHTNYYGTPKQFVFDQIEKGEIVLLE--IDVQGALQIKKKYKEA-- 116

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                             I  +P   +    R+  R +  E      F        E   
Sbjct: 117 ----------------VFIFLIPPTMEELRNRLVKRDTESEEEINTRF---KNAFRE--- 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
              LD          +++       V+  +++ +  ++      +   KDI
Sbjct: 155 ---LDFVGEYD--YFVIN-----DKVSQAVID-IENIIAAEKLRVKRHKDI 194


>gi|291383985|ref|XP_002708585.1| PREDICTED: dynein, cytoplasmic 2, heavy chain 1 isoform 2
            [Oryctolagus cuniculus]
          Length = 4306

 Score = 42.3 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  GAGK+T   +L+  L +    V   ++    P A     +L   G  +     
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALSKIGKVV---KQYTMNPKAMPKHQLL---GHIDMDTRE 2028

Query: 67   EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2029 WSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|209915597|ref|NP_001129612.1| UMP-CMP kinase isoform b [Homo sapiens]
          Length = 179

 Score = 42.3 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------NQPD 186
            +  D   +I ++R   R      +  +    + +   EKR Q +L   +       +  
Sbjct: 100 VLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKPIIDLYEEMG 153

Query: 187 RCHIVDSAHSFQSVATNILNI 207
           +   +D++ S   V   ++ I
Sbjct: 154 KVKKIDASKSVDEVFDEVVQI 174


>gi|320537739|ref|ZP_08037664.1| ribosomal protein S1 [Treponema phagedenis F0421]
 gi|320145418|gb|EFW37109.1| ribosomal protein S1 [Treponema phagedenis F0421]
          Length = 803

 Score = 42.3 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 89/248 (35%), Gaps = 64/248 (25%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + + ++ +G  G+GK+T   LL   L       H+T    G+     +  VL S G  
Sbjct: 1   MKN-IIVAIDGPAGSGKSTIAKLLAEEL-------HLTFMNTGSFYRALSLAVLRSLGGS 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             G+        AA  D  E        E   L   R+ + S  Y G  +    L  D++
Sbjct: 53  ADGS-------GAAPPDLSEEERWTEFAEHTDL---RYSNGS-VYLGNENVEAFLRSDAV 101

Query: 121 QEI--SVQEVMP-----------------------DCT----------IILDLPVDIGLK 145
           ++I  ++  ++P                       D T            LD  V+   K
Sbjct: 102 EKIVAALSAIIPIRHCINKKIRDAARSLDIICEGRDMTTVVFPDADFKFYLDASVEARAK 161

Query: 146 RVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVA 201
           R  N+ + +   E    +  ER  +  ++K  +  L IA++       +D++  + + V 
Sbjct: 162 RRFNQGTSKLSLEEITANIEERDQIDKNKK--EGSLKIAKDAAY----LDTSRLTIKEVC 215

Query: 202 TNILNIVW 209
             I N + 
Sbjct: 216 EIIKNKIH 223


>gi|323966515|gb|EGB61948.1| ATP-binding protein YghR [Escherichia coli M863]
 gi|327251768|gb|EGE63454.1| hypothetical protein ECSTEC7V_3620 [Escherichia coli STEC_7v]
          Length = 252

 Score = 42.3 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGIERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|322500244|emb|CBZ35322.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 4455

 Score = 42.3 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G+GK+T +++L++ LQ    +V +       P A   R +L   G  +     
Sbjct: 2122 VVLVGPSGSGKSTLLNILRKALQTMQIEVPMHVM---NPKAMTRRRLL---GYMDADTRE 2175

Query: 67   EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++ AAAR     +V++        +LCD                   +++SL  +
Sbjct: 2176 WYDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2216


>gi|163753063|ref|ZP_02160187.1| Deoxynucleoside kinase subfamily, putative [Kordia algicida OT-1]
 gi|161326795|gb|EDP98120.1| Deoxynucleoside kinase subfamily, putative [Kordia algicida OT-1]
          Length = 204

 Score = 42.3 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 30/188 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   LL +         H   EP      +   +  L     +   E  +     
Sbjct: 10  GAGKTTLTKLLAK---------HYKWEP---HFEDVVDNPYLDDFYTQM--ERWSFNLQI 55

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEISVQ 126
             L+     +      GK ++ DR  + D+     +    G   +  +    SL E+  +
Sbjct: 56  YFLNSRFRQVLQIRESGKKIIQDRTIYEDAHIFAPNLHAMGLMTNRDYENYQSLFELMQK 115

Query: 127 EV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IARNQ 184
            V  PD  I L   +   + ++  R    E++         +    +  + +   I++  
Sbjct: 116 LVDAPDLLIYLRADISTLVAQIHKRGRDYENSI-------SIDYLSRLNERYEAWISKYD 168

Query: 185 PDRCHIVD 192
             +  ++D
Sbjct: 169 QGKLLVID 176


>gi|126465250|ref|YP_001040359.1| adenylylsulfate kinase [Staphylothermus marinus F1]
 gi|126014073|gb|ABN69451.1| adenylylsulfate kinase [Staphylothermus marinus F1]
          Length = 181

 Score = 42.3 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 16/96 (16%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59
          +N G  + F G+ G+GKTT    + + L+ K Y V V          + AR  + L  G 
Sbjct: 4  LNKGFVVWFTGLPGSGKTTLAKNVAKILRDKGYRVEVI-------DGDWARKTISLGAGY 56

Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                          L  V  V R     G I+LC
Sbjct: 57 TREERRI--------HLHRVAWVARLLARNGVIVLC 84


>gi|29436460|gb|AAH49446.1| Cytidylate kinase [Danio rerio]
          Length = 219

 Score = 42.3 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190
            +  D   ++ + R   R         +    E++     +  R I +++   Q  +   
Sbjct: 140 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 197

Query: 191 VDSAHSFQSVATNILNIVWE 210
           +D++ S   V  ++ NI+ +
Sbjct: 198 IDASRSVDEVFADVKNILEK 217


>gi|75907697|ref|YP_321993.1| guanylate kinase [Anabaena variabilis ATCC 29413]
 gi|119371171|sp|Q3MD38|KGUA_ANAVT RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|75701422|gb|ABA21098.1| guanylate kinase [Anabaena variabilis ATCC 29413]
          Length = 199

 Score = 41.9 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           +SG  I   G  G GK T +  L +      Y V   TR P        + + +     +
Sbjct: 18  SSGKLIVLTGPSGVGKGTLMRSLLQRHPELYYSVSATTRAPRPGEVNGESYYFISRNKFE 77

Query: 61  EFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           E  A+ E +    FA          +   +  GK+++ +                +  F 
Sbjct: 78  ELLAQGEFLESAEFAGNYYGTPREAVLNQIQSGKLVVLE-------IELAGARQIRASFP 130

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           ++L              IL    +   KR++ R    E A     +R    I 
Sbjct: 131 EALS-----------IFILPPSFEELEKRIRGRGQDSEEAIARRLQRATEEIQ 172


>gi|307103587|gb|EFN51846.1| hypothetical protein CHLNCDRAFT_59789 [Chlorella variabilis]
          Length = 282

 Score = 41.9 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164
           +  + I  + + PD  +++++P ++ + RV  R S   +  +                 +
Sbjct: 165 EQAEAIEKEGIRPDIFLLINVPDELLIDRVVGRRSDPATGEIYHLTFKPPPPEIVSRLVQ 224

Query: 165 KDVMIHEKRRQIFLDIARN-------QPDRCHIVDSAHSFQSVATNILNIV 208
           +     EK R        N         +    +D   S   V  +I+  +
Sbjct: 225 RSDDTEEKARNRLRTYHANVDAVVGYYKNEVVEIDGTASMDMVFEDIVAAI 275


>gi|303276619|ref|XP_003057603.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460260|gb|EEH57554.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 265

 Score = 41.9 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 62/235 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G   +GK T   L+                     A +  R  +         A+A
Sbjct: 63  VVIAGAPASGKGTQCELIVEKF-----------GLVHISAGDLLRAAVAEGTPAGLEAKA 111

Query: 67  EAIVFAAARLDHVEN-----VIRPAL-----MEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   R D V +     +++ AL      E    L D +  S  A Q +        
Sbjct: 112 -----YMDRGDLVPDEVVVTMVKDALDCEEAEENGW-LLDGYPRS--ASQADA------- 156

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFE 163
                 I  + + PD  ++L++P ++ ++RV  R    E+  +             D   
Sbjct: 157 ------IEKEGITPDVFLLLNVPDEMLIERVVGRRLDPETGAIYHVKFFPPPEDVVDRLT 210

Query: 164 RKDVMIHEKRRQIF-------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +     EK +            +      +   +D   +   V   I +I+ E+
Sbjct: 211 IRSDDTEEKAKNRLAVHHSNVEAVVGRYEGKIREIDGDRAKTEVFAEIASILDEM 265


>gi|145224339|ref|YP_001135017.1| shikimate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315444671|ref|YP_004077550.1| shikimate kinase [Mycobacterium sp. Spyr1]
 gi|145216825|gb|ABP46229.1| shikimate kinase [Mycobacterium gilvum PYR-GCK]
 gi|315262974|gb|ADT99715.1| shikimate kinase [Mycobacterium sp. Spyr1]
          Length = 220

 Score = 41.9 bits (98), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 34/163 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L + L      +  T              +  + G  EF        
Sbjct: 9   GLPGSGKSTIGRRLAKSL---GVPLLDTDNAIEETTGRTIADIFATDGESEF-------- 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R++  E VIR AL     +L            G    +     ++L   +      
Sbjct: 58  ---RRIE--EQVIRDALATHDGVLS----------LGGGAVTTEGVREALAGHT------ 96

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              I L++    G++R          A  D  E+   ++ E+ 
Sbjct: 97  --VIYLEISAAEGVRRTGGSTVRPLLAGPDRGEKFKALMAERV 137


>gi|261889376|gb|ACY06272.1| deoxyadenosine kinase [Streptomyces flaveolus]
          Length = 219

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 64/221 (28%), Gaps = 40/221 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKT+   L+ + L                P       +  + G +E  A+    +   
Sbjct: 9   GIGKTSVAELIAKELGSM----VFYESVEDNPILP----LFYTAGPEEIAAKRYPFLLQL 60

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM---- 129
             L      I+ A  +   +L DR +   + +           + SL+    + ++    
Sbjct: 61  YFLQTRFAAIKEAYKQDDNVL-DRSIYEDWYFAKVNHDLGR--ISSLEMQVYEGLLAEMM 117

Query: 130 -----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                      PD  + L    +  L+R+  R    E       ++  V  +      + 
Sbjct: 118 REIDGLPYRKAPDLMVYLRADFETVLRRIGLRGRDFEQ------DQSLVEYYRTLWAGYD 171

Query: 179 DIARNQ--PDRCHIVDSAH-----SFQSVATNILNIVWELV 212
           D            ++D        S    A  ++  V + +
Sbjct: 172 DWVHEHYSASDVLVIDMNRTDVVNSPDD-AKRVVREVADAL 211


>gi|297570607|ref|YP_003691951.1| cytidylate kinase [Desulfurivibrio alkaliphilus AHT2]
 gi|296926522|gb|ADH87332.1| cytidylate kinase [Desulfurivibrio alkaliphilus AHT2]
          Length = 231

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 69/225 (30%), Gaps = 46/225 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE- 65
           ++ +G  GAGK+T    L   L           +          R V L        AE 
Sbjct: 9   VTIDGPSGAGKSTISRRLAARL-----------DYTYLDTGAMYRAVGLHVRRRAVDAED 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ------HLFLDS 119
           AEA+    A L+ +   + PA  +  ++L +    S      E                 
Sbjct: 58  AEAL---EACLEELAIELLPAGDDDVLVLLNGEDVSGIVRSAEMGLVASQISAYPQVRRK 114

Query: 120 LQEI-----SVQEVM-----------PDCT--IILDLPVDIGLKRV--QNRYSLRESACL 159
           L E+     +   ++           PD      LD   +   +R   Q R         
Sbjct: 115 LTELQRRLAATGGLVAEGRDMGTVVFPDALHKFYLDAAPEERARRRCEQLRQRGENPEPK 174

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVDSAH-SFQSVAT 202
           +  E+     H+        +A  +P D   IVDS+    ++V  
Sbjct: 175 EILEQIIKRDHD---DASRALAPLRPADDAVIVDSSQMPLEAVVE 216


>gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM
           3638]
 gi|23822176|sp|Q8U070|SRP54_PYRFU RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling
           The Ribonucleic Core Of The Signal Recognition Particle
           From The Archaeon Pyrococcus Furiosus.
 gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling
           The Ribonucleic Core Of The Signal Recognition Particle
           From The Archaeon Pyrococcus Furiosus.
 gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM
           3638]
          Length = 443

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT ++ L R+ Q++ Y V V       P A    R +L    ++ FG   E  
Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 +   +  +     +G  I++ D            R       ++ +++I
Sbjct: 165 ---KDAIKLAKEGVDYFKSKGVDIIIVD---------TAGRHKEDKALIEEMKQI 207


>gi|331674539|ref|ZP_08375299.1| hypothetical ATP-binding protein YghR [Escherichia coli TA280]
 gi|331068633|gb|EGI40028.1| hypothetical ATP-binding protein YghR [Escherichia coli TA280]
          Length = 252

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAVVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|257877202|ref|ZP_05656855.1| deoxynucleoside kinase [Enterococcus casseliflavus EC20]
 gi|257811368|gb|EEV40188.1| deoxynucleoside kinase [Enterococcus casseliflavus EC20]
          Length = 220

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 70/236 (29%), Gaps = 56/236 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++  +L+                      ++A    +    V       
Sbjct: 10  IVLAGTIGAGKSSLTALIANHF-----------------GSQAFYESIDDNEVLPLFYAD 52

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS--------- 112
               A +     L+     I+ A+ +   +L DR  + DS   +                
Sbjct: 53  PNKYAFLLQIYFLNKRFESIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVKVY 111

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             L  + L+E+  +  +  PD  + + +  +  L+R++ R            E + +   
Sbjct: 112 DELLANMLEELPYAAHKKHPDLLVHIRVSFETMLERIEKRGR----------EYEQLTFD 161

Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH----SFQSVATNILNIVWELVQK 214
                 + ++ +                +D            A  +L +V + ++ 
Sbjct: 162 PSLYDYYKELNKRYDQWYEEYNESPKIQIDGDQFNFVEDSQAAQAVLTMVEDALKD 217


>gi|225024312|ref|ZP_03713504.1| hypothetical protein EIKCOROL_01187 [Eikenella corrodens ATCC
           23834]
 gi|224942897|gb|EEG24106.1| hypothetical protein EIKCOROL_01187 [Eikenella corrodens ATCC
           23834]
          Length = 219

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 32/182 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +I  EG  G+GK+     L            ++ +P   P  E      L+       A
Sbjct: 6   RYIVVEGPIGSGKSPLSRKLAEHF----GCTLISEQPEKNPFLE---QFYLNAANHGLAA 58

Query: 65  -------EAEAIVFAAARLD------HVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
                    E +   AA  +       ++ V+   L+E   +    F+ +          
Sbjct: 59  ELYFLLRRTETLNLIAAADEIGNANHSMQRVVSDFLLEKDQI----FVPTIL------RE 108

Query: 112 SQHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMI 169
            +      L++ I  +  +PD  I L         ++++R     +     Y ++     
Sbjct: 109 DEQALYWQLKQKIMPEIPVPDLVIYLQTSAGAAEAQLRSRGDNHINLFPPGYLQQVHEEY 168

Query: 170 HE 171
           H 
Sbjct: 169 HR 170


>gi|148726391|emb|CAN88186.1| cytidylate kinase [Danio rerio]
          Length = 225

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190
            +  D   ++ + R   R         +    E++     +  R I +++   Q  +   
Sbjct: 146 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 203

Query: 191 VDSAHSFQSVATNILNIVWE 210
           +D++ S   V  ++ NI+ +
Sbjct: 204 IDASRSVDEVFADVKNILEK 223


>gi|160898632|ref|YP_001564214.1| adenylyl-sulfate kinase [Delftia acidovorans SPH-1]
 gi|160364216|gb|ABX35829.1| Adenylyl-sulfate kinase [Delftia acidovorans SPH-1]
          Length = 228

 Score = 41.9 bits (98), Expect = 0.057,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 41/160 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L+  L                      R  +L           +   
Sbjct: 39  GLSGSGKSTIANALQAHLHAAGR-----------------RTYVLDGDNIRSRLNRDLGF 81

Query: 71  FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R +    V  V R  +  G I++         A+     S +             +
Sbjct: 82  SEEDRAENIRRVSEVARLFVDAGTIVIA--------AFISPFRSERDTARAL---FDKGD 130

Query: 128 VMPDCTIILDLPVDIGLK-------RVQNRYSLRESACLD 160
                 + +D+P+ +  +       R   R  LR+   +D
Sbjct: 131 F---LEVFVDVPLSVAERRDPKGLYRKARRGELRQFTGID 167


>gi|301755924|ref|XP_002913850.1| PREDICTED: GPN-loop GTPase 1-like [Ailuropoda melanoleuca]
          Length = 421

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 73  GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 132

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 133 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 169


>gi|296395267|ref|YP_003660151.1| adenylate kinase [Segniliparus rotundus DSM 44985]
 gi|296182414|gb|ADG99320.1| adenylate kinase [Segniliparus rotundus DSM 44985]
          Length = 182

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 45/205 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVDEFGAEAE 67
           GAGK T  +LL + L         T +         TP  + A+   L  G     +   
Sbjct: 11  GAGKGTQSALLSKAL---GVPHVSTGDLFRANIGENTPLGQEAKK-YLDAGNLVPSSVTN 66

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           A      RL       +P   +G   + D +          R   Q   L ++  ++   
Sbjct: 67  A--MVKDRLA------QPDAKDGF--VLDGY---------PRTLDQAEALTAI--LAELG 105

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RRQIFLDIARN 183
              D  +  ++P ++ ++R++ R    ++   D   +  + IH K      Q +  +   
Sbjct: 106 QQLDTVLSFEIPEEVVVERMRARGRQDDT---DEIIKARLEIHRKETEPLLQYYESL--- 159

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
                  +++  +   V    L  +
Sbjct: 160 ----VVAINAVGTVDEVQARALKAL 180


>gi|281344939|gb|EFB20523.1| hypothetical protein PANDA_001638 [Ailuropoda melanoleuca]
          Length = 382

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122


>gi|266619842|ref|ZP_06112777.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288868551|gb|EFD00850.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 319

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 6/130 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I+  G  G+GKTT    L   L  K  +V +      TP        ++SC  +
Sbjct: 9   MVQNKIIAVMGSPGSGKTTASIKLAAELAEKKKNVILVFCDPFTPVIPF----VVSCPEE 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +          +  +   +++ I P    G I LL  R  DS  AY          FL  
Sbjct: 65  QVSVGTLLTTPSLTQKMILDSCI-PIKENGYISLLGYRLGDSLMAYPQITRDRAVDFLVC 123

Query: 120 LQEISVQEVM 129
           L+ ++   +M
Sbjct: 124 LRYLADFIIM 133


>gi|218701759|ref|YP_002409388.1| hypothetical protein ECIAI39_3479 [Escherichia coli IAI39]
 gi|301019934|ref|ZP_07184069.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301325672|ref|ZP_07219133.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|331648775|ref|ZP_08349863.1| hypothetical ATP-binding protein YghR [Escherichia coli M605]
 gi|218371745|emb|CAR19596.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli IAI39]
 gi|299882032|gb|EFI90243.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300847527|gb|EFK75287.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|330909043|gb|EGH37557.1| conserved protein YghR, with nucleoside triphosphate hydrolase
           domain [Escherichia coli AA86]
 gi|331042522|gb|EGI14664.1| hypothetical ATP-binding protein YghR [Escherichia coli M605]
          Length = 252

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|253988710|ref|YP_003040066.1| deoxynucleoside kinase family protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211637965|emb|CAR66593.1| deoxynucleoside kinase family protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780160|emb|CAQ83321.1| deoxynucleoside kinase family protein [Photorhabdus asymbiotica]
          Length = 254

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 74/221 (33%), Gaps = 26/221 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
               +I   G  G GK+T +  +   L   +       E       +A  H  L     +
Sbjct: 25  RKPKYICLTGNSGVGKSTLLKSIGSALYNLDNYTIAIDE-------KAIHHPFLQSLFSD 77

Query: 62  FGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDR-----FLDSSYAYQ-GERDSSQ 113
                    I F   R       I+  +  G  L+ +R     ++   + Y+ G   +  
Sbjct: 78  TRRYGYLIQINFMIQRALL----IKAWIDAGYNLVMERSHLEDYIFIEFMYEKGYISNDD 133

Query: 114 HLFLDSLQ-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--- 169
           H     +  EI      PD  + +D PV+  L  +  R  +      ++ + +   I   
Sbjct: 134 HDAYLVIWDEIKNHLPEPDVIVFMDFPVEFSLDNL-ARDEILGIRPREFPDEETKKIWIS 192

Query: 170 --HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              ++  + F  +   + ++  + + + +   +   ++N +
Sbjct: 193 GWFKQYNEFFAKLTEKEREKVIVFEPSLTCTEITDTVINKL 233


>gi|21668336|emb|CAC84481.1| thymidine kinase [Heliothis virescens ascovirus 3c]
          Length = 217

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 62/219 (28%), Gaps = 33/219 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           ++S EG  G+GK++ +  + +        +    EP            LL          
Sbjct: 12  YVSVEGNIGSGKSSVMRSVAKHFDD---CILFCEEPVNDWG-------LL--EYMYRDPT 59

Query: 66  AEAIVFAAARLDHVENVIRPALME-----GKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             A  F    L    +    AL E      +I++ +R   S+Y         +       
Sbjct: 60  KYAFAFEVQVLTSKYHKWINALDECRRTQKRIVVMERSPLSAYKVFTRMMRERGTISSQQ 119

Query: 121 QEISVQ---EVMPDC-TII----LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             I  Q   E  P   TI     +D        R   R    E       E   +     
Sbjct: 120 YHIYTQMFAEFQPQLKTIDHIVHIDTRASTCQVRAGERNRKAE-------EALSLEYLLD 172

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             + + +         + +D   S + VA  +   +  L
Sbjct: 173 V-ESYTNNYVRDHSSVYTIDGDRSREHVAGELTAFLSSL 210


>gi|327400978|ref|YP_004341817.1| adenylate kinase [Archaeoglobus veneficus SNP6]
 gi|327316486|gb|AEA47102.1| Adenylate kinase [Archaeoglobus veneficus SNP6]
          Length = 217

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 58/234 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T   L+     +       T         +  R  +      E G +A+  +
Sbjct: 7   GPPGSGKGTQAKLIVE---KYGIPQIST--------GDMLREAV--AKGTELGKKAKEYM 53

Query: 71  FAAARLDHVEN-----VIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDSLQEIS 124
               +   V +     +++  L +     CD+ F+   +     +  +    L+ L    
Sbjct: 54  ---DKGQLVPDEVVIGIVKERLKQPD---CDKGFILDGFPRTIAQAEALDKMLEEL---- 103

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----------ERKDVMIHEK- 172
                 D  I + +P +  +KR+ NR S R    + +            ++    ++++ 
Sbjct: 104 --GKKIDAVINIQVPEEEVVKRIVNRRSCRNCGAVYHLIYKPPKEEGKCDKCGGELYQRD 161

Query: 173 ------RRQIFLDIARN-QP--DRCHI------VDSAHSFQSVATNILNIVWEL 211
                  R  +       +P  D          +D   S   V  +I  I+ ++
Sbjct: 162 DDKEDTVRARYQVYREQTEPLIDYYQKKGLLYNIDGTKSIDDVFKDIEAILEKI 215


>gi|313151219|ref|NP_998274.2| UMP-CMP kinase [Danio rerio]
 gi|148726392|emb|CAN88187.1| cytidylate kinase [Danio rerio]
          Length = 219

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190
            +  D   ++ + R   R         +    E++     +  R I +++   Q  +   
Sbjct: 140 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 197

Query: 191 VDSAHSFQSVATNILNIVWE 210
           +D++ S   V  ++ NI+ +
Sbjct: 198 IDASRSVDEVFADVKNILEK 217


>gi|42768711|gb|AAS45572.1| predicted kinase [Aeromonas hydrophila]
          Length = 224

 Score = 41.9 bits (98), Expect = 0.058,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 19/92 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I F G+ G+GK+T    L R L      +            +A R        +E G 
Sbjct: 57  MLIIFSGLPGSGKSTIARALARRLGAVYLRI--------DTIEQAIRAA--EQADNEMGP 106

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               + +  AR           L  G I++ D
Sbjct: 107 AGYFVAYGLAR---------ENLALGSIVITD 129


>gi|315586699|gb|ADU41080.1| adenylate kinase [Helicobacter pylori 35A]
          Length = 191

 Score = 41.9 bits (98), Expect = 0.059,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTDRGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189


>gi|294661488|ref|YP_003579941.1| PseT 3' phosphatase and 5' polynucleotide kinase [Klebsiella phage
           KP15]
 gi|292660649|gb|ADE34897.1| PseT 3' phosphatase and 5' polynucleotide kinase [Klebsiella phage
           KP15]
          Length = 294

 Score = 41.9 bits (98), Expect = 0.059,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 40/209 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN  LF++  G+ G+GKTT         +     V ++R+   +    A +      G  
Sbjct: 1   MN--LFMTI-GVPGSGKTT---WAHEKARELGNTVTISRDDLRSSLYNAGKGA---GGYK 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-S 119
              A+ E     A   DHV   +   L +GK ++    + ++      ++S ++ + + +
Sbjct: 52  YTKAKEE---MIAEMQDHV---VISTLKDGKNVI----IHNT----HLKESDKNHWREIA 97

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           L+  +   +        D+ +   L+R   + R +L  S   + F +     + K R  F
Sbjct: 98  LEHKADFHIE-----YFDVSIVELLRRNHKRGRDALPVSRVWEMFNQ-----YRKIR-GF 146

Query: 178 ---LDIARNQPDRCHIVDSAHSFQSVATN 203
              ++I      +C I D   +   V   
Sbjct: 147 VPAMEIVNTHNQKCVIFDVDGTLTKVGQR 175


>gi|157370642|ref|YP_001478631.1| ABC transporter-like protein [Serratia proteamaculans 568]
 gi|157322406|gb|ABV41503.1| ABC transporter-related protein [Serratia proteamaculans 568]
          Length = 584

 Score = 41.9 bits (98), Expect = 0.059,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G FI+  G  G+GK+T   LL   L+ ++ D+ +
Sbjct: 367 KGHFITLTGSSGSGKSTLAKLLASELKPESGDILL 401


>gi|71895153|ref|NP_001026418.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial [Gallus gallus]
 gi|53135033|emb|CAG32388.1| hypothetical protein RCJMB04_24e8 [Gallus gallus]
          Length = 361

 Score = 41.9 bits (98), Expect = 0.059,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSS 112
            D      +A +F   R+    + +   L  G+ ++ +R   S + +      QG     
Sbjct: 130 PDGHSYRLQAWLF-GNRILQYSDALEHLLTTGQGVVLERSPYSDFVFLDAMFKQGYIHKR 188

Query: 113 QHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
                  ++ IS+ + + P   I LD+PV    KR+Q +    E 
Sbjct: 189 CVDHYKEIKGISICEFLPPHLVIYLDVPVPDVQKRLQEKGEPYEK 233


>gi|300813264|ref|ZP_07093623.1| guanylate kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512625|gb|EFK39766.1| guanylate kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 205

 Score = 41.9 bits (98), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 70/231 (30%), Gaps = 43/231 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G  +   G  G+GK T    + +  +   +     TR P            +     
Sbjct: 1   MSGGFLLVLSGPSGSGKGTVSQAIMKENKEIVFSTSVTTRTPRPGEVNGENYFFVSKTKF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++   + E +  A    ++    +  +   +  G+I+L +  +D   A Q ++   +   
Sbjct: 61  EQMVEKDELLEHAFVHTNYYGTPKQFVFDQIENGEIVLLE--IDVQGALQIKKKYKEA-- 116

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                             I  +P   +    R+  R +  E      F        E   
Sbjct: 117 ----------------VFIFLIPPTMEELRNRLVKRDTESEEEINTRF---KNAFRE--- 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
              LD          +++       V+  +++ +  ++      +   KDI
Sbjct: 155 ---LDFVGEYD--YFVIN-----DKVSQAVID-IENIIAAEKLRVKRHKDI 194


>gi|2462109|emb|CAA72104.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
          Length = 598

 Score = 41.9 bits (98), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 34/138 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI F G  G GKTT   L+ ++L+   Y              E  R  L++  V 
Sbjct: 324 MN---FI-FTGNPGTGKTTIARLVAKYLKALGY-------LSSGHLVEVDRARLVAQYVG 372

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + G + +A++ +A               +G +L  D       AY   R        +++
Sbjct: 373 QTGPKTQAVIDSA---------------KGGVLFID------EAYSLARGGENDFGKEAI 411

Query: 121 QEISVQ--EVMPDCTIIL 136
             +     ++  D  +IL
Sbjct: 412 DTLVKGMEDLREDLVVIL 429


>gi|20095048|ref|NP_614895.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
 gi|23822175|sp|Q8TUY9|SRP54_METKA RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|19888324|gb|AAM02825.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
          Length = 447

 Score = 41.9 bits (98), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 18/136 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT  + L R+LQRK Y V +   +P    A E  R +       +     E  
Sbjct: 108 GLYGMGKTTTAAKLARYLQRKGYRVGLVGADPYRPAAGEQLRQL---AEEVDVPVHVED- 163

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 ++     +     E  +++ D            RD      +D L+E++ + + 
Sbjct: 164 --VDDAVEMAVKGVEALKDECDVVIVD---------TAGRDRLSEDLIDELREMA-ERIE 211

Query: 130 PDCTIILDLPVDIGLK 145
           P   ++L L   +G K
Sbjct: 212 PH-EVLLVLDATVGQK 226


>gi|269794616|ref|YP_003314071.1| hypothetical protein Sked_12960 [Sanguibacter keddieii DSM 10542]
 gi|269096801|gb|ACZ21237.1| hypothetical protein Sked_12960 [Sanguibacter keddieii DSM 10542]
          Length = 167

 Score = 41.9 bits (98), Expect = 0.060,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 59/199 (29%), Gaps = 46/199 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG+ G GKT     +   LQR+ +        G    A     V     VD        
Sbjct: 8   VEGVSGTGKT----AVCDELQRRGFHAVH----GDRELAYRGDPVTGDPTVDGGHEHH-- 57

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           +    A    + +  RP                   Y      +   F+  L        
Sbjct: 58  LWDVDAVRALIADQTRP-----------------VTYLCGGSRNFAQFVADL-------- 92

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
             D   +LD+ V+  ++R+  R         +  ER+ V+     R+       + P   
Sbjct: 93  --DAVFVLDVDVETLVQRLDQRPMDEWGHRPE--ERQLVLRLHATRE-------DVPRDG 141

Query: 189 HIVDSAHSFQSVATNILNI 207
            ++D+      V   IL +
Sbjct: 142 IVIDATGPLADVVDTILRL 160


>gi|297526828|ref|YP_003668852.1| hypothetical protein Shell_0841 [Staphylothermus hellenicus DSM
          12710]
 gi|297255744|gb|ADI31953.1| hypothetical protein Shell_0841 [Staphylothermus hellenicus DSM
          12710]
          Length = 210

 Score = 41.9 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          GL I   G +G+GKT+    L ++L+ + ++  +    G    A     +L
Sbjct: 2  GLLICLFGADGSGKTSIARYLAKYLRSQGWNTSIAWLRGSHTLASILARLL 52


>gi|224009265|ref|XP_002293591.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970991|gb|EED89327.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 285

 Score = 41.9 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 21/100 (21%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESAC--------------LDYFERKDVMIHEKR--R-QI 176
           I L++P ++ ++RV  R +  E+                L   E++     EK   R + 
Sbjct: 185 IFLNVPDEVLVERVVGRRTDPETGKIYHMTFSPPEDEEILARLEQRSDDTEEKVVVRLEQ 244

Query: 177 FLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWELV 212
           F                 VD     + V+  I+  + E++
Sbjct: 245 FHANVEAVKGSYTDIAVEVDGTQKPEEVSGVIMQAIDEVL 284


>gi|328717561|ref|XP_001947826.2| PREDICTED: hypothetical protein LOC100162187 [Acyrthosiphon pisum]
          Length = 505

 Score = 41.9 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 2/121 (1%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT  S L  F +   + V+   E      +   +   LS   D+     
Sbjct: 11  IVLTGGPCGGKTTGQSRLCTFFENLGWKVYRVPETANVLLSGGIKFSELS--DDQVHTFQ 68

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E ++    +L+     +  +  +  +++CDR    + AY      ++ +  + L  + ++
Sbjct: 69  ENLLRCMLQLEDTYFELGKSCDQNCLIICDRGAMDAAAYISSDKWNKIMKKNGLNMVDLR 128

Query: 127 E 127
           +
Sbjct: 129 D 129


>gi|195059758|ref|XP_001995695.1| GH17893 [Drosophila grimshawi]
 gi|193896481|gb|EDV95347.1| GH17893 [Drosophila grimshawi]
          Length = 300

 Score = 41.9 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 25/142 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G+  +GK+T    L  +L  K   VH+  E    P A   ++   +    E    +
Sbjct: 4   VIITGLPASGKSTRARQLHDYLAGKGKRVHIISENEAVPKALYEKNAFFNSSQSEKVVRS 63

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCD--------RF---LDSSYAYQGERDSSQHL 115
           + +   A+R           L +  +++ D        R+     +      +      +
Sbjct: 64  D-LKSEASR----------HLNKDDVVILDAGNYIKGFRYELHCMTKAVRTTQCTLFTCI 112

Query: 116 FLDSLQEISVQEVMPDCTIILD 137
            L+     +++   PD    LD
Sbjct: 113 PLEQAWTFNIERNEPDK---LD 131


>gi|304398915|ref|ZP_07380785.1| kinase [Pantoea sp. aB]
 gi|304353619|gb|EFM17996.1| kinase [Pantoea sp. aB]
          Length = 167

 Score = 41.9 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 36/151 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62
           +   F G+ G GK+T   +L   L+     V            +    VL +      E 
Sbjct: 1   MLYIFSGLPGCGKSTVAKMLSEKLKAVYLRV------------DTIEQVLRNESAAFREM 48

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G E   I++A AR           L  G  ++ D              +  +L  DS ++
Sbjct: 49  GPEGYFILYALAR---------ENLRLGLPVVTD------------SVNDLNLVRDSFRD 87

Query: 123 ISVQEVMPDCTI-ILDLPVDIGLKRVQNRYS 152
           I++   +P   I IL    +    RV+NR S
Sbjct: 88  IALSSGVPFLEIEILCSDPEQHRARVENRIS 118


>gi|254519247|ref|ZP_05131303.1| guanylate kinase [Clostridium sp. 7_2_43FAA]
 gi|226912996|gb|EEH98197.1| guanylate kinase [Clostridium sp. 7_2_43FAA]
          Length = 212

 Score = 41.9 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 52/168 (30%), Gaps = 28/168 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          V   TR P      +   +  L+    
Sbjct: 4   NRGVLIVISGPSGAGKGTICKELLDKHNNIYISVSATTRSPRAGEV-DGINYYFLTKESF 62

Query: 61  EFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E        +  A    +        +   L EGK ++ +  +D   A Q + + S+   
Sbjct: 63  EEKVSQNGFLEYANVHGNFYGTPKVNVEKMLEEGKDVILE--IDIQGALQVKENFSEG-- 118

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                             I  LP   +   +R+  R S  E + +  F
Sbjct: 119 ----------------VFIFILPPSMEELKQRIIKRGSETEESLMTRF 150


>gi|217967600|ref|YP_002353106.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM
           6724]
 gi|217336699|gb|ACK42492.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM
           6724]
          Length = 529

 Score = 41.9 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 19/101 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I+ +G  G+GKTT    +   L+    D           +    R V L         
Sbjct: 315 KIITIDGTAGSGKTTIAKFIAEKLKFDYID-----------SGALYRAVGLITKEKNLST 363

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSY 103
           E E I F        +N I+    +   ++ + DR + S  
Sbjct: 364 EEEIIGF------LYQNPIKFNFEDKIFRVYISDREITSMI 398


>gi|194768713|ref|XP_001966456.1| GF22188 [Drosophila ananassae]
 gi|190617220|gb|EDV32744.1| GF22188 [Drosophila ananassae]
          Length = 300

 Score = 41.9 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 11/90 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          +   G+  +GK+T    L+   + K   VH+  E    P        L         ++ 
Sbjct: 4  VVITGLPASGKSTRARQLREHFEEKGKRVHLISENEAVP------KALFEKNSHAGDSQK 57

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96
          E +V    R D      R  L +  +++ D
Sbjct: 58 EKVV----RSDLKSEASR-NLNKDDLVILD 82


>gi|169834710|ref|YP_001693273.1| putative guanylate kinase [Clostridium botulinum B1 str. Okra]
 gi|169834980|ref|YP_001715812.1| putative guanylate kinase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169123258|gb|ACA47093.1| putative guanylate kinase [Clostridium botulinum B1 str. Okra]
 gi|169409087|gb|ACA57497.1| putative guanylate kinase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 197

 Score = 41.9 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 51/214 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEFG------- 63
           G+GK+T    +   L+++ Y+      TR+P      E   H+ L+   D          
Sbjct: 17  GSGKST----IAELLEKEGYNYIESYTTRKPRYK--GERG-HIFLNSINDRNDIDILDDG 69

Query: 64  --AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +   I +A  + +H          +G          S Y  + +  +     +D  +
Sbjct: 70  YYPKENVIAYACYKDEHYYATKEQYKNKGT---------SIYIVEVKGVNELRSEIDDAK 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                       + L     I   R+  RY             K+ +I E++ Q   +  
Sbjct: 121 I---------LVLYLRADEQIRRGRMIKRYIDVNGNT-----SKNYLIAERKAQ---ERI 163

Query: 182 RNQPDRC------HIVDSAHSFQSVATNILNIVW 209
            +  +        +++D+      V  +I  I+ 
Sbjct: 164 IHDKENFQIIPCDYVIDTNMPITEVLKSIKTIIE 197


>gi|17547348|ref|NP_520750.1| putative deoxyguanosine kinase (DGUO kinase) (DGK) protein
           [Ralstonia solanacearum GMI1000]
 gi|17429651|emb|CAD16336.1| putative deoxyguanosine kinase (dguo kinase) (dgk) protein
           [Ralstonia solanacearum GMI1000]
          Length = 214

 Score = 41.9 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 22/177 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  GAGKT     L   L+       +   P   P                   + 
Sbjct: 9   IVVEGPIGAGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQE-I 123
             ++  A RL       + A + G+ ++ D FL  D  +A Q    + +    D++ + +
Sbjct: 62  RFLLQRAQRLAA----WQKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMAQAL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     D  + L    +  L R+  R    E+         D    E+    + ++
Sbjct: 117 ALPPQRIDLVVCLQARAEDLLPRIARRAVPYEAGI-------DAEYLERICAAYGEL 166


>gi|302545985|ref|ZP_07298327.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302463603|gb|EFL26696.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 240

 Score = 41.9 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 45/228 (19%)

Query: 7   ISFE--GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I+ E  G   +GK++ I  +  F +R  + V    E       E  R             
Sbjct: 33  IAVEFAGSPKSGKSSTIDTIVHFFKRMGFRVFAPTEGASKRTPEQLRK-----------D 81

Query: 65  EAEAIVFAAARLDHVENVIRPAL------MEGKILLCDRFLDSSYAY---QGERDSSQHL 115
            A      A  +  V   I   L          +++ DR    S A+   Q ++D     
Sbjct: 82  RA------AFNVWTVNYAISQLLSAYYDDSRSDLIILDRGCFDSVAWNELQRKKDVMGEN 135

Query: 116 FLDSLQEISVQ----EVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIH 170
               +++ ++       +     +     ++ L+R      +  E   ++    + +   
Sbjct: 136 EAKVIRDFALHPMWAGFISKL-YLFTCEPEVSLERETAATLTTLEGRTMNR---ETLSEL 191

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHS--FQS----VATNILNIVWELV 212
            +  +   D     P    ++D+      Q     VA +I+ I  E +
Sbjct: 192 LREYRELRDSLNTYP--LMVIDTTAPGTPQESGYKVAEDIVQIWEEKL 237


>gi|195440943|ref|XP_002068294.1| GK13248 [Drosophila willistoni]
 gi|194164379|gb|EDW79280.1| GK13248 [Drosophila willistoni]
          Length = 219

 Score = 41.9 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 68/206 (33%), Gaps = 24/206 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GK T  + +     +  +            + +  R  + S      G + +AI+
Sbjct: 32  GGPGCGKGTQCAKIVE---KYGF--------THLSSGDLLREEVASDSDK--GRQLQAIM 78

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEISVQEVM 129
            + A    V N    +L+ G I    R   SS  +  +     +   +   ++I+     
Sbjct: 79  TSGA---LVPNEEVLSLLNGAI---TRAKGSSKGFLIDGYPREKGQGIAFEEQIAPA--- 129

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
            D  +      +    R+  R +       D  E   +   +  +     I     ++  
Sbjct: 130 -DLVLYFQCAEETMKDRILARANAAAVKRADDNEATILARLKTFKDNTNAILEQYVEKTL 188

Query: 190 IVDSAHSFQSVATNILNIVWELVQKR 215
            +++      +  +++  +  +++K+
Sbjct: 189 TINANRPVDEIFLDVVQAIDCVLKKK 214


>gi|87201265|ref|YP_498522.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136946|gb|ABD27688.1| adenylylsulfate kinase [Novosphingobium aromaticivorans DSM 12444]
          Length = 644

 Score = 41.9 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L+++ L                         LL       G   + 
Sbjct: 476 FTGLSGSGKSTIANLVEKRLHAVGKHTF-----------------LLDGDNVRHGLNKDL 518

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +     G I+L         A+     + +   + SL  ++ 
Sbjct: 519 GFTEADRIENIRRVGEVAKLMTDAGLIVLT--------AFISPFRAER-EMVRSL--MAD 567

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E      + +D P+++   R
Sbjct: 568 GEF---IEVFIDTPLEVAESR 585


>gi|55978401|ref|YP_145457.1| ABC transporter, ATP-binding protein [Thermus thermophilus HB8]
 gi|55773574|dbj|BAD72014.1| ABC transporter, ATP-binding protein [Thermus thermophilus HB8]
          Length = 258

 Score = 41.9 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61
           G F++  G  G+GKTT + LL   L+    +V +  EP     P A A +  +LS   + 
Sbjct: 27  GEFLAVLGPNGSGKTTLLRLLAGELRPTEGEVFLLGEPLAVYGPQALARQRAVLSQVREM 86

Query: 62  FGAEAEAIVFAAARLDHVENVIRP 85
                   V    RL H+    RP
Sbjct: 87  AFPYTAYEVAFLGRLPHLVGRERP 110


>gi|332172318|gb|AEE21572.1| uridine kinase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 207

 Score = 41.9 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 18/167 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCG 58
           M++ L I+  G  G+GK+     L +        V + RE     A +         +  
Sbjct: 1   MSAPLVIAISGASGSGKSLFTENLLKEFSEDGKHVQILREDHYYRAQDHLPMEEREKNNY 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHL 115
                 E E +      ++H+      AL   + +    +   +    A   +  S+  +
Sbjct: 61  DHPKAFEHELL------VEHLH-----ALKNWQSVDYPHYCYKTHTRLAQTEKLMSAPVI 109

Query: 116 FLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            ++ +  ++ QE+ P  D  I +D P+DI L R   R        ++
Sbjct: 110 IIEGIMLLANQELQPLFDIKIFVDTPLDICLLRRMKRDIAERGRTIE 156


>gi|51894189|ref|YP_076880.1| adenylate kinase [Symbiobacterium thermophilum IAM 14863]
 gi|68568763|sp|Q67JW4|KAD_SYMTH RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|51857878|dbj|BAD42036.1| Adenylate kinase [Symbiobacterium thermophilum IAM 14863]
          Length = 216

 Score = 41.9 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 71/236 (30%), Gaps = 58/236 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT------REPGGTPAAEAARHVLLSCGVD 60
           I   G  GAGK T   LL     ++      T          GTP  + A+  +   G  
Sbjct: 3   IILMGPPGAGKGTQAVLLA---GQEGIPHISTGDIFRAHMSQGTPLGKLAKEYV-DAGKY 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                  A+V         + + +P   +G   + D +          R   Q   LD  
Sbjct: 59  VPDDVTNAMV--------RDRLAQPDCKKGF--VLDGY---------PRTPEQARALD-- 97

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY----F 162
           + ++   +  D  I +D+P ++ ++R   R                 RE+   D      
Sbjct: 98  EMLAELGLALDAVINIDVPDELLVERAVGRRVCRSCGATYHVRFNPPREAGRCDRCGGEL 157

Query: 163 ERKDVMIHEKRR---QIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209
            ++     EK      ++      + +   +R     V        V  +I   V 
Sbjct: 158 YQRSDDQEEKVAVRLNLYHSQTAPLLQFYKERGLVRTVRGDQPMDQVTADIKEAVR 213


>gi|293416429|ref|ZP_06659068.1| ATP-binding protein yghR [Escherichia coli B185]
 gi|291431785|gb|EFF04768.1| ATP-binding protein yghR [Escherichia coli B185]
          Length = 252

 Score = 41.9 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|227484999|ref|ZP_03915315.1| guanylate kinase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236996|gb|EEI87011.1| guanylate kinase [Anaerococcus lactolyticus ATCC 51172]
          Length = 199

 Score = 41.9 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M  G  +   G  G GK T +  L        Y V   TR+         +   L     
Sbjct: 1  MKKGFLLVISGPSGVGKGTVLHDLMNTQTNLVYSVSATTRKKRDGEIEGVSYFYLNHDEF 60

Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94
          ++   E + + +A    ++    +  +   + EGKI++
Sbjct: 61 EKMIEEDKFLEYAHVHNNYYGTPKEFVEKKINEGKIVI 98


>gi|158318128|ref|YP_001510636.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Frankia sp. EAN1pec]
 gi|158113533|gb|ABW15730.1| sulfate adenylyltransferase, large subunit [Frankia sp. EAN1pec]
          Length = 640

 Score = 41.9 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 34/144 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  + +  +                 LL       G   + 
Sbjct: 466 FTGLSGAGKSTIANLVEKRLHEQGFHTY-----------------LLDGDNVRHGLNKDL 508

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++  V   A   +  G I+L      S  +            L+  + I +
Sbjct: 509 GFTDADRVENIRRVTEVARLMVDAGVIVLA-----SFISPFRAERQLARDLLEPGEFIEI 563

Query: 126 QEVMPDCTIILDLPVDIGLKRVQN 149
                     +D P+D+   R + 
Sbjct: 564 H---------VDTPLDVAESRDRK 578


>gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101]
 gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101]
          Length = 184

 Score = 41.9 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 37/154 (24%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   LL + L    Y    T       A ++   +      +   A  E      
Sbjct: 21  GAGKTTVGHLLAQHL---GYSFLDTDNLITQAAGKSINEIF---ATEGEAAFRELETNIL 74

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
           + +   +N+       G I++  RF  S   +                            
Sbjct: 75  SEISSYKNL--TIATGGGIVIS-RFNWSYLRHG-------------------------IV 106

Query: 134 IILDLPVDIGLKRVQN---RYSLRESACLDYFER 164
           + LD+PV++   R+Q    R  ++ S  L   + 
Sbjct: 107 VWLDVPVEVLYSRLQGDQTRPLIQNSNPLARLQA 140


>gi|260892733|ref|YP_003238830.1| guanylate kinase [Ammonifex degensii KC4]
 gi|260864874|gb|ACX51980.1| guanylate kinase [Ammonifex degensii KC4]
          Length = 202

 Score = 41.9 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 56/190 (29%), Gaps = 48/190 (25%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M +GL +   G  G GK T    L          V   TR P      E         G 
Sbjct: 1   MKTGLLLVISGPSGVGKGTVCRALLEKDPSIYLSVSVTTRPP---RVGEK-------DGQ 50

Query: 60  DEFGAEAEAIVFAAARLDHVEN-------------VIRPALMEGKILLCDRFLDSSYAYQ 106
           D F    E  +   AR + +E               +  AL  G+ +L            
Sbjct: 51  DYFFVSEERFLEMVARGELLEWARVYSFYYGTPKAPVFEALAAGRDVLL----------- 99

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE- 163
            E D      +    +        DC +I  LP   +    R+  R +    A       
Sbjct: 100 -EIDVQGGFKVRENYK--------DCVLIFLLPPSWEELEARLVRRGTEDAQARQFRLNW 150

Query: 164 -RKDVMIHEK 172
            ++++ ++ +
Sbjct: 151 AKQELSLYHR 160


>gi|312211922|emb|CBX92006.1| similar to guanylate kinase [Leptosphaeria maculans]
          Length = 203

 Score = 41.9 bits (98), Expect = 0.065,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 38/211 (18%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  GAGK+T +S L   +  +  + + H TR P GT       + +      +   
Sbjct: 17  IVISGPSGAGKSTILSRLFAEYPDKFGFSISHTTRAPRGTEKNGVEYYFVTKEEFQQLVD 76

Query: 65  E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +    E   F           +     +G++ + D                  + ++ ++
Sbjct: 77  KKGFVEHAQFGGNCYGTSIQAVNDIAEKGRVCILD------------------IEMEGVK 118

Query: 122 EISVQ--EVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +++       P    +   P   ++  KR+++R + +E A +    +       +    F
Sbjct: 119 QVANHPTFPRPR--FLFLSPPSMEVLEKRLRSRATDKEEAIVKRLNQA------RVEMEF 170

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                   D+  +             +   V
Sbjct: 171 AHSGEAPHDKIVV---NDDLDKAYEEVKKFV 198


>gi|269123503|ref|YP_003306080.1| deoxynucleoside kinase [Streptobacillus moniliformis DSM 12112]
 gi|268314829|gb|ACZ01203.1| deoxynucleoside kinase [Streptobacillus moniliformis DSM 12112]
          Length = 227

 Score = 41.9 bits (98), Expect = 0.065,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 74/223 (33%), Gaps = 42/223 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  +G+ G GK++   +L        YD  +  EP          + +L     +    +
Sbjct: 24  ICVDGVVGVGKSSLGKILAEK-----YDSVLYEEP-------VIDNPILDKYYYDRKRWS 71

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----------QGERDSSQ 113
             +   F   R       I+ A   GK +  DR +     +           Q E D  +
Sbjct: 72  FPLQIFFLNKRFQA----IKNASRIGKCV-MDRSIYGDVIFSKMLVEDGDMTQEEFDLYE 126

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            L  + L+ +      P   I L+  VD  L +++ R    E      +  + +  H   
Sbjct: 127 ELLFNMLEHVE----KPALMIYLETSVDSALAKIKKRGRDYEQIVP-RYYWESLDRH--Y 179

Query: 174 RQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           R+ F      +I     D    V++    + +   I   + EL
Sbjct: 180 REYFKNYNISEIITINVDEIDFVNNEKDKEYILKLIDEKLSEL 222


>gi|212697275|ref|ZP_03305403.1| hypothetical protein ANHYDRO_01843 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848776|ref|ZP_08170286.1| adenylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212675724|gb|EEB35331.1| hypothetical protein ANHYDRO_01843 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480420|gb|EGC83482.1| adenylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 214

 Score = 41.9 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 69/233 (29%), Gaps = 54/233 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   G  GAGK T    L + L        D+  T     TP    A+  + + G     
Sbjct: 3   IILLGPPGAGKGTQAERLIKELDAVQISTGDIFRTNIKNNTPLGTKAKEYI-NKGQLVPD 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                +V      D ++ V      +GK +L D F  +    Q E         D   +I
Sbjct: 62  ELTIDLV-----WDALDKV-----EDGKTILLDGFPRNIT--QAEALDEGMQKRD--NKI 107

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY------------------SLRESACLDYFERK 165
                  D  I +++P D+ ++R+  R                      +    +   ++
Sbjct: 108 -------DKVININVPEDVIIERISGRRVNVSTGKVYHIKFNPPKVEGIDDETGEKLIQR 160

Query: 166 DVMIHEKRRQIFLDIARNQ----------PDRCHIVDSAHSFQSVATNILNIV 208
           +       ++  LD+                    +D A +   V   I   +
Sbjct: 161 EDDTEAAVKER-LDVYNKHTSVLIDYYNKKGILVTIDGAKTPDEVFDQIKKSL 212


>gi|182418720|ref|ZP_02949993.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237669753|ref|ZP_04529730.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182377414|gb|EDT74970.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237654827|gb|EEP52390.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 162

 Score = 41.9 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 49/158 (31%), Gaps = 36/158 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L++ L     +V +  +       +  R  +L    D    
Sbjct: 3   KLIIIRGNSGSGKTTIAKALQQKL---GNNVMLISQ-------DVIRREILHV-HDGIDT 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +A  +         ++ +I        I++                     +  +L E++
Sbjct: 52  KALPL---------IKELILYGKDNCDIVI-------------LEGILNSDWYHTLFELT 89

Query: 125 VQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLD 160
             +   D       D+P +  + R   + +  +    D
Sbjct: 90  KFKFE-DKIFAYYYDIPFEETILRHYTKSNCNDFGEND 126


>gi|311088601|gb|ADP68587.1| glycosyltransferase [Streptomyces sp. SCSIO 01934]
          Length = 417

 Score = 41.9 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 25/166 (15%)

Query: 28  LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDH-VENVIRPA 86
           L    ++VHV   P  T + ++    L +  V +     E +      L++ + +   P 
Sbjct: 24  LAAAGHEVHVASNPALTASIKSTG--LTAVPVGKDHNLHEMLTENRDSLENPLSDWSTPE 81

Query: 87  LMEGKI--LLCDRFLDS-SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG 143
           L       +L   F  S  +AYQ   D   H  +D  +        PD  I  D PV   
Sbjct: 82  LDRHSWEQVLMK-FKVSVMFAYQTYNDCMVHELVDYARHW-----QPDLVIW-D-PVTYA 133

Query: 144 ---LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                RV      R   C+D        I+ K R++FL     QP+
Sbjct: 134 GPVAARVVGAAHARLLWCID--------IYAKMREVFLARLAEQPE 171


>gi|299740360|ref|XP_001838852.2| hypothetical protein CC1G_09229 [Coprinopsis cinerea okayama7#130]
 gi|298404207|gb|EAU82967.2| hypothetical protein CC1G_09229 [Coprinopsis cinerea okayama7#130]
          Length = 209

 Score = 41.9 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 24/133 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   ++I   G    GKTT   +L + L                   E AR V+   G  
Sbjct: 15  MTRTIYIV--GPSSTGKTTLCEVLAKRLGLSG----------SAYITEVARQVMKEKGYT 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----------QGER 109
                    +     ++H++        E +I+LCDR       Y           Q  R
Sbjct: 63  R-EDVGNIQMQMDIMIEHLKREEAGLSDEHRIVLCDRSAIDPVVYARLTAQSSGEDQSGR 121

Query: 110 DSSQHLFLDSLQE 122
            +    F  +L+ 
Sbjct: 122 LTDSQAFRAALER 134


>gi|257452904|ref|ZP_05618203.1| guanylate kinase [Fusobacterium sp. 3_1_5R]
 gi|257466715|ref|ZP_05631026.1| guanylate kinase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917867|ref|ZP_07914107.1| guanylate kinase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059446|ref|ZP_07923931.1| guanylate kinase [Fusobacterium sp. 3_1_5R]
 gi|313685122|gb|EFS21957.1| guanylate kinase [Fusobacterium sp. 3_1_5R]
 gi|313691742|gb|EFS28577.1| guanylate kinase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 187

 Score = 41.9 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 38/215 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G      G  GAGK+T    +++ L         TREP          + L     +
Sbjct: 1   MPKGNLYVVSGPSGAGKSTICRKVRKMLGINLATSATTREPRTGEVHGVDYYFLSHAEFE 60

Query: 61  EFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +   E   + +A    ++   +++ +   + +G+ ++             E D    L +
Sbjct: 61  KKIQEGAFLEYAKVHNNYYGTLKSEVENRVNQGEKVIL------------EIDVQGGLQV 108

Query: 118 DSLQEISVQEVMPDC-TIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +L         PD   I    P ++    R++ R +  E             I  + + 
Sbjct: 109 KALY--------PDAHLIFFKTPNLEQLEARLRGRKTDSEE-----------TIQLRLKN 149

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              ++   +     IV+  H+ +    +++ I+ E
Sbjct: 150 SIEELKCEEKYDICIVN--HTVEQACNDLIQIIEE 182


>gi|229015237|ref|ZP_04172272.1| hypothetical protein bmyco0001_55830 [Bacillus mycoides DSM 2048]
 gi|228746039|gb|EEL96007.1| hypothetical protein bmyco0001_55830 [Bacillus mycoides DSM 2048]
          Length = 283

 Score = 41.9 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T  +LL   L  KN DV +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTANLLYDILIEKNIDVELFLE 39


>gi|238854772|ref|ZP_04645102.1| cell division protein FtsY [Lactobacillus jensenii 269-3]
 gi|260664004|ref|ZP_05864857.1| signal recognition particle-docking protein FtsY [Lactobacillus
           jensenii SJ-7A-US]
 gi|282933850|ref|ZP_06339198.1| FtsY-like protein [Lactobacillus jensenii 208-1]
 gi|238832562|gb|EEQ24869.1| cell division protein FtsY [Lactobacillus jensenii 269-3]
 gi|260561890|gb|EEX27859.1| signal recognition particle-docking protein FtsY [Lactobacillus
           jensenii SJ-7A-US]
 gi|281301939|gb|EFA94193.1| FtsY-like protein [Lactobacillus jensenii 208-1]
          Length = 437

 Score = 41.9 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 24/128 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  +++   V +      T  A A   +       E+G   E  V
Sbjct: 240 GVNGAGKTTTIGKLAQRFKQEGKKVVLVA--ADTFRAGAVEQL------KEWGKRTETEV 291

Query: 71  FA----AARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123
                 A     V + ++  L E    +L D            R  ++   +  L++I  
Sbjct: 292 VTGPVQADPASVVYDGVKHGLEEDADYVLVD---------TAGRLQNKQNLMKELEKIER 342

Query: 124 SVQEVMPD 131
           ++++++PD
Sbjct: 343 TIKKLVPD 350


>gi|296504157|ref|YP_003665857.1| ATP-binding protein [Bacillus thuringiensis BMB171]
 gi|296325209|gb|ADH08137.1| ATP-binding protein [Bacillus thuringiensis BMB171]
          Length = 213

 Score = 41.9 bits (98), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 25/164 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+R  + V     P   P  E  + + L     E     
Sbjct: 26  ISLQGPMASGKTTL----AKRLERCGFSVIY-ENP--YPIVEKRKRLKLDMNSKEG---- 74

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F A +   +E  I+     +G +++ DR       +        G+    ++   D
Sbjct: 75  ----FIANQKMFIEAKIKDFQNAKGSVVIFDRGPEDIEFYTLFYPMVIGKEWDIENELKD 130

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L ++  +E   D    LD+       R  N  +   S   + F
Sbjct: 131 ELYKL--RECRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 172


>gi|290961593|ref|YP_003492775.1| ABC transporter ATP-binding protein [Streptomyces scabiei 87.22]
 gi|260651119|emb|CBG74240.1| putative ABC-transporter ATP-binding subunit [Streptomyces scabiei
           87.22]
          Length = 322

 Score = 41.9 bits (98), Expect = 0.067,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 72/200 (36%), Gaps = 37/200 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G+     G  GAGKTT + LL   L+      +     + REPG    A        S  
Sbjct: 36  GML----GPNGAGKTTAVRLLTTLLRPDAGSARIAGHDLVREPGAVRRAIGVTGQYASVD 91

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA------YQGERDSS 112
            D         +F  ARL  V +   PA   G ++  DRF  +  A      Y G     
Sbjct: 92  GD-LTGRQNLRLF--ARLHRVRD---PAGRAGDLI--DRFGLTEAADRPVSTYSGGMRRR 143

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             L    ++  +         + LD     GL  V +R  +R++      E   V++  +
Sbjct: 144 LDLAASLIRRPA--------VLFLD-EPTTGLDPV-SRNRIRDAVRDLREEGTTVLLTTQ 193

Query: 173 RRQIFLDIARNQPDRCHIVD 192
               +L+ A    DR  ++D
Sbjct: 194 ----YLEEADQLADRIVLMD 209


>gi|67467928|ref|XP_650037.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|56466587|gb|EAL44651.1| hypothetical protein EHI_001780 [Entamoeba histolytica HM-1:IMSS]
          Length = 215

 Score = 41.9 bits (98), Expect = 0.067,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 14/110 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI   G  G GK+T I  LKR L +K       +E      +   +  +L   +   G+ 
Sbjct: 6   FIVITGGVGVGKSTLIHNLKRSLPKKER--IFIKEYIDFKPSTGKK--MLEETLKGKGSM 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGER 109
            E  +F    +D  +  +  A    K ++ +R      F+ S+ AY   R
Sbjct: 62  YELQLFI---IDCFKEQLERAKQM-KYVIMERSPIDSIFIFSNEAYFQGR 107


>gi|326790870|ref|YP_004308691.1| guanylate kinase [Clostridium lentocellum DSM 5427]
 gi|326541634|gb|ADZ83493.1| guanylate kinase [Clostridium lentocellum DSM 5427]
          Length = 200

 Score = 41.9 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 25/168 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I   G  G+GK T +  L +  Q        TR+P                  +
Sbjct: 1   MKEGLKIVLSGPSGSGKGTIVKELIKNEQFLLSISVTTRQPRQGEEEGVHYFFKTKEAFE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  A+ E + +A                      CD +  +  A+  E        +  +
Sbjct: 61  KMIAQDELLEYACF--------------------CDNYYGTPKAFIEESVKKGKDVILEI 100

Query: 121 Q---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           +      ++E+ PD   I  +P    L  +++R   R +   +  +++
Sbjct: 101 EVQGAQQIKEIYPDAIFIFVIPP--SLAELESRLVGRGTEERNIIDQR 146


>gi|58584579|ref|YP_198152.1| adenylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311651|sp|Q5GSW4|KAD_WOLTR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|58418895|gb|AAW70910.1| Adenylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 216

 Score = 41.9 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 73/232 (31%), Gaps = 49/232 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTRE--PGGTPAAEAARHVLLSCGVDE 61
           + I+  G  G+GK T  SLL      K   V  + R     G+   +  +  + S  + +
Sbjct: 1   MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQ 60

Query: 62  FGAEAEAI---VFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLF 116
            G   E +   +         +   R       +  +L +R+                + 
Sbjct: 61  DGVICELLYDQLALMDDNFLFDGFPRNLNQAHFLTQILRERY----------NRDVDIVI 110

Query: 117 LDSLQE-ISVQEVMPDCTIILD----------------LPVDIGLKRVQNRYSLRESACL 159
              L + +++  +  +  + LD                +       R++ R    + + +
Sbjct: 111 ELQLNDKVAIDRLK-NRLVCLDCKSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAI 169

Query: 160 DYFERKDVMIHEKR---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           D    +    H +    R+ +        D+  ++D+  +   V   I + +
Sbjct: 170 DR---RIGEYHVQVKSLREYYR-------DKLLMIDANLNVDQVKQEIESKI 211


>gi|326204210|ref|ZP_08194070.1| Shikimate kinase [Clostridium papyrosolvens DSM 2782]
 gi|325985721|gb|EGD46557.1| Shikimate kinase [Clostridium papyrosolvens DSM 2782]
          Length = 167

 Score = 41.9 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 51/211 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S   I   G+ G+GKTT    L   L    Y    T         +  R ++   G++
Sbjct: 2   MESPKNIVLIGMPGSGKTTVGKALSERL---GYTFIDTDHLICEMTGKTPRQLVEEDGLE 58

Query: 61  E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                + EA++               ++ +   ++            G       + ++ 
Sbjct: 59  YFMKVQDEAVL---------------SINDSTCVIST----------GGGLIHSEISMNY 93

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           L+ I          I L+   DI  +R+  +R   R +  L       + ++ KR  ++ 
Sbjct: 94  LKSIGF-------VIYLNTKYDIIRERMDTSRKLARTAGTL-------LELYNKRVPLYQ 139

Query: 179 DIARNQPDRCHIVDS-AHSFQSVATNILNIV 208
             A         +D  +    +V+  IL ++
Sbjct: 140 KYADAA------IDCDSADPDAVSGTILGVI 164


>gi|198458405|ref|XP_002138536.1| GA24827 [Drosophila pseudoobscura pseudoobscura]
 gi|198136333|gb|EDY69094.1| GA24827 [Drosophila pseudoobscura pseudoobscura]
          Length = 670

 Score = 41.9 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          MN+G  I+  G  GAGKTT ++ + + L+
Sbjct: 55 MNTGDLIAILGGSGAGKTTLLAAISQRLR 83


>gi|229543863|ref|ZP_04432922.1| Shikimate kinase [Bacillus coagulans 36D1]
 gi|229325002|gb|EEN90678.1| Shikimate kinase [Bacillus coagulans 36D1]
          Length = 185

 Score = 41.9 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 65/199 (32%), Gaps = 47/199 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           GAGKTT    L   L  +  D+     E  G P A      + +   + +    E  +  
Sbjct: 12  GAGKTTVGHALASLLGSRATDLDRWIEEEEGMPPA-----AIFAVKGEAYFRRKETEML- 65

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD- 131
             R   +  VI                       G     +   +  L+         D 
Sbjct: 66  -KRATSLAGVIMT---------------------GGGIVMREENVCLLKR--------DG 95

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T+ LD   +I + R+QN  S   +A     + + + +++KRR  +L  A        ++
Sbjct: 96  VTVFLDCDPEILVSRIQNDPSRPVAAG--RTKEEIISLYKKRRPFYLSCAD------LVI 147

Query: 192 DSA-HSFQSVATNILNIVW 209
           D+   S   +   I   + 
Sbjct: 148 DTTGKSVAEIVAEISGRIK 166


>gi|15604484|ref|NP_221002.1| adenylate kinase [Rickettsia prowazekii str. Madrid E]
 gi|6225578|sp|Q9ZCS6|KAD_RICPR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|3861178|emb|CAA15078.1| ADENYLATE KINASE (adk) [Rickettsia prowazekii]
 gi|292572266|gb|ADE30181.1| Adenylate kinase [Rickettsia prowazekii Rp22]
          Length = 213

 Score = 41.9 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 79/237 (33%), Gaps = 58/237 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +   +  V            +  R ++ +   +    
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKIDLPHIAV-----------GDIFRTIIKTSTSE---- 45

Query: 65  EAEAIVFAAARLDHVENVIR-PALMEGKIL--LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                       + + N ++  AL+  +I+  +   FL SS    G         L+  +
Sbjct: 46  -----------AELINNYVKQGALIPNEIVNQVIKVFLLSSKYKNGYILDGYPRNLEQAK 94

Query: 122 EISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACL--------------------- 159
                   P    I  D+  ++ +KRV  RYS +    +                     
Sbjct: 95  FFEAFIQKPQIKIIYFDVADELLIKRVLGRYSCKNCGKIYNIHFLQPKIEHVCDVCSSSV 154

Query: 160 -DYFERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
            DY +  +  + +KR +++      +          +IV++  + Q +  +I  I+ 
Sbjct: 155 FDYRKDDNKEVIKKRIKVYKTETYPLIDYYKNSGNFYIVNANKNEQEIENDIQKILK 211


>gi|226227095|ref|YP_002761201.1| guanylate kinase [Gemmatimonas aurantiaca T-27]
 gi|226090286|dbj|BAH38731.1| guanylate kinase [Gemmatimonas aurantiaca T-27]
          Length = 215

 Score = 41.9 bits (98), Expect = 0.069,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 68/221 (30%), Gaps = 46/221 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPA-AEAARHV-----LLSCGVDEFGAEA 66
           G GKTT    L        Y V   TR P          R +     L +    EF   A
Sbjct: 13  GGGKTTIARRLLERRSDLGYSVSCTTRAPRDGEVDGRDYRFLTSDAFLTARDAGEFAEWA 72

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E     +   R +     +   L  G+ +L D  +D   A Q                  
Sbjct: 73  EVHGNFYGTLRSE-----VERVLASGQHVLMD--IDVQGARQ------------------ 107

Query: 125 VQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                PD  +I  LP   ++   R+  R S      L         + E  R  ++ +  
Sbjct: 108 FHAAFPDTVLIFVLPPSGEVLKTRLSARKSESRERLLVRLRNARSELGEVGRYHYV-VVN 166

Query: 183 NQPDRCH-----IVDSAH----SFQSVATNILNIVWELVQK 214
           +  DR       I+D+         +V   +  ++ +L Q+
Sbjct: 167 DNLDRAVDQVSAIIDAEGLRHDRVHAVEAQVEALIAQLEQE 207


>gi|119587447|gb|EAW67043.1| hCG2032408, isoform CRA_e [Homo sapiens]
          Length = 4275

 Score = 41.9 bits (98), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1957 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2014

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2015 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2051


>gi|2344858|emb|CAB11460.1| adenylate kinase [Mycobacterium leprae]
          Length = 181

 Score = 41.9 bits (98), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 61/206 (29%), Gaps = 33/206 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK T    L   L         T         E  R  +      + G EA
Sbjct: 3   VVLLGPPGAGKGTQAQRLAEKL---GIPQIST--------GELFRRNI--EKDTKLGHEA 49

Query: 67  EAIVFAAAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  + A      D    ++   L +   +  D F+   Y    E+  + H  L+      
Sbjct: 50  KKYLDAGDLVPADLTNQLVDDRLNKSDTV--DGFILDGYPRSLEQAKALHEMLER----- 102

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLDIAR 182
            +    D  +   +   + L+R++ R    ++    ++             R     +  
Sbjct: 103 -RGTDIDAVLEFRVSQAVVLERLKGRGRADDTDDVVINRM--------NIYRDETRSLLE 153

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
                   +D+  +   V    L+ +
Sbjct: 154 YYSSELKTIDAIGTMDEVFARALHAL 179


>gi|313222107|emb|CBY39111.1| unnamed protein product [Oikopleura dioica]
          Length = 305

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 89/257 (34%), Gaps = 57/257 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHV--------LL 55
           IS EG    GK+T I +L+     +++++  T EP  T      +    +        LL
Sbjct: 15  ISIEGNIATGKSTFIKILEEAAGTEDWEI--TPEPVSTWTQIEGKNPVSLEGSSSGGNLL 72

Query: 56  SCGVDEFGAEAEAIVFAA--ARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERD 110
               D+    +      A  +R+       +P   A +  + +  DR++   +A      
Sbjct: 73  KLFYDDAKRWSYTFQSFALLSRMRLQRAPFKPRTVARLSERSIHSDRYI---FARNCFET 129

Query: 111 SSQHL------------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157
                             L+SL ++ +        I L     +  KR+  R    E   
Sbjct: 130 GLMTETEWSIYKDWSTYLLESLGDLQLDGF-----IYLRCDPKVCDKRMAKRGRPEEQGV 184

Query: 158 CLDYF----ERKDVMIHEKRRQIFL--DIARNQPDRCHIVDSAHSF---QSVA----TNI 204
            L+Y     E+ +  +H +    F   DI ++ P     +D    F   + +       +
Sbjct: 185 TLEYLSQLHEKHEKWLHNR---EFHDEDIMQDIP--ILEIDCNEEFHDDEEIKSKMLQQV 239

Query: 205 LNIVWELVQKRVSPLSS 221
              V ++ +KR   LSS
Sbjct: 240 REFVRQVQEKRQEKLSS 256


>gi|195154481|ref|XP_002018150.1| GL17554 [Drosophila persimilis]
 gi|194113946|gb|EDW35989.1| GL17554 [Drosophila persimilis]
          Length = 671

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          MN+G  I+  G  GAGKTT ++ + + L+
Sbjct: 56 MNTGDLIAILGGSGAGKTTLLAAISQRLR 84


>gi|166788546|dbj|BAG06721.1| DYNC2H1 variant protein [Homo sapiens]
 gi|208967773|dbj|BAG72532.1| dynein, cytoplasmic 2, heavy chain 1 [synthetic construct]
          Length = 4307

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|283806679|ref|NP_001368.2| cytoplasmic dynein 2 heavy chain 1 isoform 1 [Homo sapiens]
 gi|311033479|sp|Q8NCM8|DYHC2_HUMAN RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName:
            Full=Cytoplasmic dynein 2 heavy chain; AltName:
            Full=Dynein cytoplasmic heavy chain 2; AltName:
            Full=Dynein heavy chain 11; Short=hDHC11; AltName:
            Full=Dynein heavy chain isotype 1B
          Length = 4307

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|122937398|ref|NP_001073932.1| cytoplasmic dynein 2 heavy chain 1 isoform 2 [Homo sapiens]
          Length = 4314

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|326326027|ref|YP_004250836.1| hypothetical protein VIBNI_0087 [Vibrio nigripulchritudo]
 gi|323669078|emb|CBJ93122.1| Protein of unknown function [Vibrio nigripulchritudo]
          Length = 290

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 41/135 (30%), Gaps = 47/135 (34%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA------ARHVLLSC--- 57
           I+F G++G GK+T    L   L    YDV V         +E        R + +     
Sbjct: 8   IAFLGMDGIGKSTLCRKLSDILTDFGYDVEVVSWTKYCNESEKSYNRDTLRELYVGTFKM 67

Query: 58  --------------------------------GVDEFGAEAEAIVFAAARLDHVEN---- 81
                                                 + +E  +  AA ++   N    
Sbjct: 68  MYGSATTDTGPFTSFFPNGIDQFFDEQTSETLNNRSVHSNSEFSMLGAALVELAGNFALR 127

Query: 82  --VIRPALMEGKILL 94
             VI PAL EGK ++
Sbjct: 128 QHVISPALDEGKFVI 142


>gi|317181931|dbj|BAJ59715.1| adenylate kinase [Helicobacter pylori F57]
          Length = 191

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSMEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V +     + R   R     D     +V+ H + R +FL
Sbjct: 105 AQNEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189


>gi|288818037|ref|YP_003432384.1| adenylate kinase [Hydrogenobacter thermophilus TK-6]
 gi|288787436|dbj|BAI69183.1| adenylate kinase [Hydrogenobacter thermophilus TK-6]
 gi|308751638|gb|ADO45121.1| adenylate kinase [Hydrogenobacter thermophilus TK-6]
          Length = 213

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 59/238 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T   +L   L    +    T         +  R  + +       A
Sbjct: 1   MILVFLGPPGAGKGTQAKMLSEEL---GFKHIST--------GDMLREAVKNATPLGLKA 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI-----LLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +         R D V + I  A++E  +     ++ D F          R  +Q   LDS
Sbjct: 50  KE-----YMDRGDLVPDDIVIAMVEQVVLKEKKVILDGF---------PRTIAQATSLDS 95

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY---- 161
           +  +          I+ ++  ++ + R+  R                 +E    D     
Sbjct: 96  M--LKKHGREVSKVILFEIDDEVIVDRLTGRRICPNCGAVYHLKFSPPKEDQICDICGTK 153

Query: 162 -FERKDV--MIHEKRRQIFLDIARNQPDRCHI------VDSAHSFQSVATNILNIVWE 210
             +R+D    +  +R +++        D          +D+  S + +  ++   V +
Sbjct: 154 LIQRQDDTEEVIRRRLEVYRRQTAELIDFYKRQNKLISLDAQKSIEELYKDLKKAVED 211


>gi|163790063|ref|ZP_02184498.1| deoxynucleoside kinase family protein [Carnobacterium sp. AT7]
 gi|159874763|gb|EDP68832.1| deoxynucleoside kinase family protein [Carnobacterium sp. AT7]
          Length = 221

 Score = 41.9 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 72/229 (31%), Gaps = 42/229 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKT+   LL + L  +                     +  +   +E   +    +   
Sbjct: 11  GAGKTSVAELLGKSLNSE----VFYENVDDNEILP----LFYTASEEEQHLKRYPFLLQL 62

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--------------FLDS 119
             L      I+ AL     +L DR +   + +         +               ++ 
Sbjct: 63  DFLSSRFKSIKEALHNKNNVL-DRSIYEDWYFAKVNTELGRISASEFSIYEKLLNNMMEE 121

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQE+  +   PD  + L    +  L R+  R    E       ++  +  ++   Q + +
Sbjct: 122 LQELPKKA--PDLMVYLQGSFETILYRIGLRGRDFEQ------DQGLMDYYKALWQGYDN 173

Query: 180 IARN----------QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
              +            DR  +V+++     V   +   + E ++ R++ 
Sbjct: 174 WVTDHYKASDVLVINIDRIDVVNNSEDADFVVKLVKEKLAE-MESRINE 221


>gi|302670497|ref|YP_003830457.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus
           B316]
 gi|302394970|gb|ADL33875.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus
           B316]
          Length = 692

 Score = 41.9 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 41/160 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I ++   L   + DV  +++      A+       +  +D      E +V
Sbjct: 50  GINGAGKTTLIKIIIGELSADDGDVTFSKDITWGYLAQ-------NQNIDSENTIYEELV 102

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLD--------SSYAYQ--------- 106
                +  +EN IR A    K +       L DR+          S YA++         
Sbjct: 103 EVKKDVIDLENNIRLAEENMKHVQGAELEALMDRYTRMQDEFQRKSGYAWKSEVTGVAKG 162

Query: 107 -GERDSSQHLFLDSLQ-----EISVQEV---MPDCTIILD 137
            G  D      + +L       +++ ++    PD  IILD
Sbjct: 163 LGFLDEELDKRISTLSGGQKTRVALGKLLLQKPDL-IILD 201


>gi|170077666|ref|YP_001734304.1| adenylate kinase [Synechococcus sp. PCC 7002]
 gi|169885335|gb|ACA99048.1| adenylate kinase [Synechococcus sp. PCC 7002]
          Length = 187

 Score = 41.9 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 73/223 (32%), Gaps = 53/223 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ + F G  GAGK T   +L             T         E  R  +      
Sbjct: 1   MAQGVRLIFLGPPGAGKGTQAQVLAE---SCGIPHIST--------GEILRAAI--ANQT 47

Query: 61  EFGAEAEAIVFAAARLDHVE-----NVIRPALMEGK----ILLCDRFLDSSYAYQGERDS 111
           E G +A+  V    R + V      N+IR  L E       +L D F  +    Q E  +
Sbjct: 48  ELGQQAQGFV---DRGELVPDSLILNLIRERLQEQDAQQGWIL-DGFPRN--VSQAEFLN 101

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKD--- 166
           +    L    ++++   +PD T+     V+  L R +   +          E  R+    
Sbjct: 102 TLLTELKQQCDVALNLEVPDATL-----VERLLSRGRKDDNQETIRR--RLEVYREQTAP 154

Query: 167 -VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  ++K  Q  L            VD   S + V   +   +
Sbjct: 155 VIDFYQK--QGSL----------KSVDGDRSLEEVTAALEQAI 185


>gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843]
 gi|238687539|sp|B0JFW8|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK
 gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843]
          Length = 190

 Score = 41.9 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 42/202 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-EAEAIVFA 72
           G+GK+T   LL R LQ + +D  +  E     A +  R + +  G   F   E + +   
Sbjct: 22  GSGKSTLGELLSRRLQYRFFDTDILIE---RVAGKKIREIFVDEGEATFRELETQVLAEL 78

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           ++                K ++                      ++         +M   
Sbjct: 79  SSLT--------------KTVI------------ATGGGMVLKPMNW--SYLRHGLM--- 107

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            I LD+P++I +KR++   S       D  + K  ++ E+RR ++         R  + D
Sbjct: 108 -IWLDVPLEILVKRLKQDTSRPLLQSTD-LDSKLELLLEQRRGLY----AEADLRIVVSD 161

Query: 193 SAHSFQSVATNILNIVWELVQK 214
              +   +   IL  +  +++ 
Sbjct: 162 -LDTPTDIVEKILTAIPTVIKD 182


>gi|150402658|ref|YP_001329952.1| chromatin associated protein KTI12 [Methanococcus maripaludis C7]
 gi|150033688|gb|ABR65801.1| Chromatin associated protein KTI12 [Methanococcus maripaludis C7]
          Length = 257

 Score = 41.9 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 42/220 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+   GK+T    + + +  KN D  +               ++         +
Sbjct: 1   MLIILTGLPSVGKSTFSKAISKKMAEKNIDNII-----------LGTDLVRESFPVWKES 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E I       D    +I+ AL     ++ D   D++Y Y  +R    ++  +      
Sbjct: 50  YEEFI------RDSNSYLIKNALENNFSVIVD---DTNY-YNSKRRDLMNIAKECDNNYV 99

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLDIARN 183
                   TI L  P+D+ LKR   R     +  + + +E+ D              A +
Sbjct: 100 --------TIYLKAPLDLLLKRNIERGQKIPNEVIKNMYEKFDTPGT--------KYAWD 143

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
            PD    VD+          IL+ + ++ + + S +   K
Sbjct: 144 LPD--ITVDTTEKID--HNEILSKILKIAENKSSKIEEDK 179


>gi|42780219|ref|NP_977466.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
 gi|42736138|gb|AAS40074.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
          Length = 1930

 Score = 41.9 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 34/138 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI F G  G GKTT   L+ ++L+   Y              E  R  L++  V 
Sbjct: 624 MN---FI-FTGNPGTGKTTIARLVAKYLKALGY-------LSSGHLVEVDRARLVAQYVG 672

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + G + +A++ +A               +G +L  D       AY   R        +++
Sbjct: 673 QTGPKTQAVIDSA---------------KGGVLFID------EAYSLARGGENDFGKEAI 711

Query: 121 QEISVQ--EVMPDCTIIL 136
             +     ++  D  +IL
Sbjct: 712 DTLVKGMEDLREDLVVIL 729


>gi|45185856|ref|NP_983572.1| ACR170Cp [Ashbya gossypii ATCC 10895]
 gi|44981646|gb|AAS51396.1| ACR170Cp [Ashbya gossypii ATCC 10895]
          Length = 289

 Score = 41.9 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 52/210 (24%), Gaps = 36/210 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  S L   +Q  +                    ++     +      E  V
Sbjct: 105 GGPGSGKGTQCSRLVERMQFVHVGAGDLLRDEQNRPGSQYGELIKHHIKEGLIVPQEVTV 164

Query: 71  FAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
               R   +H     R  L++G                         F  + ++  V   
Sbjct: 165 ALLRRAIEEHYRAGRRKFLVDG-----------------FPRKMDQAF--TFEKTVVPSK 205

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR------QIFLDIAR 182
                +  D P  + L+R+  R         D  E                 + F     
Sbjct: 206 F---VLFFDCPERVMLERLLTRGQT-SGRSDDNIESIKKRFRTYVETSMPVVEHF----- 256

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            Q D+   +      + V   +   V E +
Sbjct: 257 AQQDKVVRLSCDQPVEEVYKQVEAAVKERL 286


>gi|293412362|ref|ZP_06655085.1| ATP-binding protein yghR [Escherichia coli B354]
 gi|291469133|gb|EFF11624.1| ATP-binding protein yghR [Escherichia coli B354]
          Length = 239

 Score = 41.9 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 10  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 69

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 70  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 128

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 129 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 180


>gi|242080247|ref|XP_002444892.1| hypothetical protein SORBIDRAFT_07g000980 [Sorghum bicolor]
 gi|241941242|gb|EES14387.1| hypothetical protein SORBIDRAFT_07g000980 [Sorghum bicolor]
          Length = 285

 Score = 41.9 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 63/244 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
             G   +GK T   L+K                    A +  R  + +   +   A+   
Sbjct: 73  ISGAPASGKGTQCELIKTKF-----------GLVHISAGDLLRAEIAAGSDNGKAAKD-- 119

Query: 69  IVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 +   V          E +++P   E    L D +  S          SQ + L+
Sbjct: 120 ---FMEKGQLVPDEIVVNMVKERLLQPDAQENGW-LLDGYPRSY---------SQAMALE 166

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164
           +L+      + PD  I+LD+P ++ ++RV  R                           +
Sbjct: 167 TLE------IRPDTFILLDVPEELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 220

Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +     EK         Q    +     +    V    +   V   I  ++   + K+  
Sbjct: 221 RFDDTEEKVKLRLQTYYQNIESLLSTYEEIIVKVKGDRTVGDVFAEIEKLLASSLNKKTE 280

Query: 218 PLSS 221
            +SS
Sbjct: 281 MVSS 284


>gi|296216057|ref|XP_002754438.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Callithrix
            jacchus]
          Length = 4299

 Score = 41.9 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1968 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2025

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2026 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2062


>gi|156937855|ref|YP_001435651.1| hypothetical protein Igni_1066 [Ignicoccus hospitalis KIN4/I]
 gi|221272211|sp|A8ABE2|NTPTH_IGNH4 RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase
          THEP1; AltName: Full=Nucleoside triphosphate
          phosphohydrolase
 gi|156566839|gb|ABU82244.1| protein of unknown function DUF265 [Ignicoccus hospitalis KIN4/I]
          Length = 171

 Score = 41.9 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 18/52 (34%)

Query: 8  SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          +  G  GAGK+T    +   L++    V  T  P           +++    
Sbjct: 5  AITGPPGAGKSTLARKVVEELKKAGLKVCGTSCPDVREGGRRVGFLIVDVED 56


>gi|323178695|gb|EFZ64271.1| hypothetical protein ECOK1180_2427 [Escherichia coli 1180]
          Length = 209

 Score = 41.9 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 31/157 (19%)

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQ 126
             AR       +      G I+L DR+       AY G     +     F+  L     +
Sbjct: 68  FVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERK 127

Query: 127 EV------MPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    PD  I L++ +++   R     R SL     +       +           
Sbjct: 128 AFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGA 177

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +          +D+    + V  +    + + +  R
Sbjct: 178 QLVD--------IDANQPLEQVLVDAEKAIMDFMTAR 206


>gi|302348006|ref|YP_003815644.1| Adenylate kinase [Acidilobus saccharovorans 345-15]
 gi|302328418|gb|ADL18613.1| Adenylate kinase [Acidilobus saccharovorans 345-15]
          Length = 209

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 10/150 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G+ G GKTT +SLL+   + +   + V             + ++ +     + +
Sbjct: 13  KVIVVTGVPGVGKTTVLSLLQEKAKERGLRLRVLNFGDFMLDNAVRKGLIKNRDQIRYLS 72

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E +         +       L EG  L+ D               +   +L  L    
Sbjct: 73  FREQLELQDIAASSIIEEAGSDLKEGDYLIVD---------THAIIKTPLGYLPGLPSNV 123

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           +  + PD  ++++      + R Q R + R
Sbjct: 124 INSLRPDMIVVIEADPKEIVAR-QQRDATR 152


>gi|260778896|ref|ZP_05887788.1| hypothetical protein VIC_004303 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605060|gb|EEX31355.1| hypothetical protein VIC_004303 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 179

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 54/178 (30%), Gaps = 33/178 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI F G  G+GKT+ I      LQ   Y            A E  R V+         A
Sbjct: 3   RFIVFTGGPGSGKTSVI----EHLQNLGYK----------TADEIGRRVIQQQVESGGNA 48

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDS-L 120
                   A R   V   +      G   + +  DR +  SY Y    D +    L    
Sbjct: 49  LPWLDK-TAFRDAMVSEEVDKYRRIGVGEEFVFFDRSIVDSYGYSLLEDLALTESLTQHC 107

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            ++    +      +   P        +  +S       D+   + V  +EK R+ + 
Sbjct: 108 NQL-RHNLQ---VFVF--PPW------KEIFSNDAERKQDF--AEAVATYEKMREAYQ 151


>gi|13508300|ref|NP_110250.1| uridine kinase [Mycoplasma pneumoniae M129]
 gi|2499091|sp|P75217|URK_MYCPN RecName: Full=Uridine kinase; AltName: Full=Cytidine
           monophosphokinase; AltName: Full=Uridine
           monophosphokinase
 gi|1673952|gb|AAB95929.1| uridine kinase [Mycoplasma pneumoniae M129]
 gi|301633281|gb|ADK86835.1| uridine kinase [Mycoplasma pneumoniae FH]
          Length = 213

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 30/170 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ ++  G   +GKTT   ++ + L++K     + ++    P    +     +   D 
Sbjct: 4   KKGILVAIGGGSCSGKTTIADMIYQLLRKKLKVAILPQDNYYKPYKNKSMAQRKAINFDH 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A    ++       H++N++      GK +         Y Y       + + +  L 
Sbjct: 64  PDAFDWKLL-----WSHLDNLLM-----GKTV-----AVPMYDYVNYTRKKETIEIGPLN 108

Query: 122 EISVQEVMPDCTIILD----------LPVD-IGLKRVQNRYSLRESACLD 160
            + ++ +MP      D          + V+  G +R+  R         D
Sbjct: 109 VVILEGLMP----WFDERIAKLCKLKIFVEATGEERLIRRIERDWERGRD 154


>gi|307204436|gb|EFN83143.1| Probable adenylate kinase isoenzyme F38B2.4 [Harpegnathos saltator]
          Length = 189

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 10/86 (11%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIARNQPD 186
           D  +  D+  +   KR+  R ++ + A  +          +KR +IF     +I  +  D
Sbjct: 109 DLILFFDVANETLKKRLLGRAAVSQRADDN------EETIKKRIEIFNSKNNEIVEHYKD 162

Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212
           +   +++  +   + T +   +  L+
Sbjct: 163 KVVRINAEGTVDEIFTKVTKALDTLL 188


>gi|238019384|ref|ZP_04599810.1| hypothetical protein VEIDISOL_01248 [Veillonella dispar ATCC 17748]
 gi|237864083|gb|EEP65373.1| hypothetical protein VEIDISOL_01248 [Veillonella dispar ATCC 17748]
          Length = 209

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 17/119 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I   G  GAGK T  + +++ +    Y V   TR P      E   +   S    E
Sbjct: 4   RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAPRVGEV-EGVNYFFRSKEEFE 62

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105
                +A +  A   D+     +  +   L EGK +L            +RF D+ + Y
Sbjct: 63  SLLSEDAFLEYAKVYDNYYGTPKQHVMDLLDEGKSVLLEIDIQGAMQVKERFSDAVFIY 121


>gi|212637863|ref|YP_002314383.1| Deoxyadenosine/deoxycytidine kinase [Anoxybacillus flavithermus
           WK1]
 gi|212559343|gb|ACJ32398.1| Deoxyadenosine/deoxycytidine kinase [Anoxybacillus flavithermus
           WK1]
          Length = 222

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 74/221 (33%), Gaps = 36/221 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L   LQ +      + E   T          L     +F   +
Sbjct: 15  ITIAGTVGVGKSTMTKALADALQFR-----TSFEKVDTNP-------YLDKFYADFKRWS 62

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQ-GERDSSQHLFL 117
             +   F A R    + +       G   + DR +       +   Y+ G      +   
Sbjct: 63  FHLQIYFLAERFKEQKRIFEY----GGGFVQDRSIYEDTGIFAKMHYEKGTMSKVDYETY 118

Query: 118 DSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            SL E   ++     PD  I L+   +  +KR++ R    E      + ++    +E+  
Sbjct: 119 TSLFEAMVMTPYFPHPDLLIYLEGSFEEIIKRIRERGRPMEQQTPIEYWKEMYERYERWI 178

Query: 175 QIF-----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             F     L I  N+ D     D+  S + +   I  ++ +
Sbjct: 179 NSFNACPVLRININEYDIIR--DA-QSIEPIVAKIGYMIEQ 216


>gi|163784173|ref|ZP_02179109.1| guanylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880558|gb|EDP74126.1| guanylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 206

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 55/175 (31%), Gaps = 28/175 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M   LFI      G GKTT  +LL + +      +   TR P            L     
Sbjct: 1   MKGELFI-LSAPAGGGKTTITNLLLKEIPNLTRVITCTTRNPREGEVNGKDYIFLSKEEF 59

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++   E + + +A    ++    +  +   L EGK ++                      
Sbjct: 60  EQGIKEGKFLEYAVVHGNYYGTPKEEVEKLLNEGKDVIL---------------VIDVQG 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +  ++     ++ P  TI L +P   +  + R++ R    E       E      
Sbjct: 105 MRQIK----GKIRPLTTIFL-IPPSIEELVNRMKKRGDSPEEIQK-RLETAKKEF 153


>gi|47209487|emb|CAF89603.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 442

 Score = 41.5 bits (97), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 12/102 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAA--RHVL 54
            I   G+ G+GKTT +  L   L            +  VH    P      +    + V+
Sbjct: 41  LIVL-GMAGSGKTTFVQRLTAHLHSIEAPPYVINLDPAVHQVPFPANIDIRDTVNYKEVM 99

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G+   G    ++   A R D V   I       + +L D
Sbjct: 100 KQFGLGPNGGIVTSLNLFATRFDQVMQFIEKKQQNHRFVLID 141


>gi|303232356|ref|ZP_07319049.1| guanylate kinase [Atopobium vaginae PB189-T1-4]
 gi|302481540|gb|EFL44607.1| guanylate kinase [Atopobium vaginae PB189-T1-4]
          Length = 191

 Score = 41.5 bits (97), Expect = 0.074,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 28/173 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
                 G  GAGK T ++ ++  +      V   TR+P        + + L      E  
Sbjct: 6   RLFVISGPSGAGKGTIVARIRELMPNLALTVSATTRKPRDGEVDGESYYFLSDKAFSEKV 65

Query: 64  AEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            + +A +  A    H    +++ +   +  G+ ++                      +D 
Sbjct: 66  VQ-DAFLEWAHVHGHCYGTLKSEVERHINTGRSVI--------------------FEIDP 104

Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
               +V+ + PD  +I  +P    +  +R+++R S  E +           + 
Sbjct: 105 QGAFNVKAIYPDAVLIFIMPPSLQVLKERLEHRGSEDEQSLALRLHNAAQEMQ 157


>gi|71030694|ref|XP_764989.1| signal recognition particle receptor subunit alpha [Theileria parva
           strain Muguga]
 gi|68351945|gb|EAN32706.1| signal recognition particle receptor alpha subunit, putative
           [Theileria parva]
          Length = 579

 Score = 41.5 bits (97), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 2   NSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           N G++ I F G+ G GK+T ++ +   L+   + V V      T  + A     L     
Sbjct: 374 NGGIYSIVFLGVNGVGKSTSLAKVAYLLKSNGFKVLVVA--CDTFRSGAVEQ--LKTHTT 429

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96
             G       +        +  I+ A+     ++L D
Sbjct: 430 NLGLHLFERGYGKDPAQIAKEGIKHAVNNQFDVVLID 466


>gi|307544979|ref|YP_003897458.1| sulfate adenylyltransferase, large subunit [Halomonas elongata DSM
           2581]
 gi|307217003|emb|CBV42273.1| sulfate adenylyltransferase, large subunit [Halomonas elongata DSM
           2581]
          Length = 637

 Score = 41.5 bits (97), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G  I F G  G+GK+T  + L+  L R+ Y                   +LL      
Sbjct: 469 HAGKCIWFTGYSGSGKSTLANALEVELNRRGYHT-----------------MLLDGDNIR 511

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +  +  A R +++     V R     G I++ 
Sbjct: 512 HGLCKDLGMDEADRAENIRRVGEVARLFAEAGVIVIT 548


>gi|238650951|ref|YP_002916807.1| adenylate kinase [Rickettsia peacockii str. Rustic]
 gi|259494017|sp|C4K2F8|KAD_RICPU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|238625049|gb|ACR47755.1| adenylate kinase [Rickettsia peacockii str. Rustic]
          Length = 212

 Score = 41.5 bits (97), Expect = 0.076,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +           +       +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  +L  +    + Y   G   + +       +   
Sbjct: 45  EAELINNYVRQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KR+  RYS +    +                      DY 
Sbjct: 101 KEKIK---IIYFDVSGELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +  + +KR +++      +          +IV+ + + Q +  +I  I+ 
Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210


>gi|159186305|ref|NP_355916.2| putative fructose transport system kinase [Agrobacterium
           tumefaciens str. C58]
 gi|159141439|gb|AAK88701.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 220

 Score = 41.5 bits (97), Expect = 0.076,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 30/160 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDEFG 63
           I+  G  G+GK+T    +   L  +     +    G        EA         +D F 
Sbjct: 29  IAIAGAPGSGKSTLAERVVDALAGEGVSAALFPMDGFHYDDAVLEAMNRRAFKGAIDTFD 88

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLC----DRFLDSSYAYQGERDSSQHLFLDS 119
           A              + +++         ++     DR ++   A  G R   Q + +  
Sbjct: 89  AHG------------LRHMLERLKANQDDVVAVPVFDRAIE--IARAGGRLIPQSVDIIV 134

Query: 120 LQ-------EISVQEVMP--DCTIILDLPVDIGLKRVQNR 150
            +       E     + P  D T+ +D+  D    R+++R
Sbjct: 135 CEGNYLLARETPWDRLKPIFDLTVFVDVDEDDLRARLRDR 174


>gi|323143399|ref|ZP_08078084.1| guanylate kinase [Succinatimonas hippei YIT 12066]
 gi|322416804|gb|EFY07453.1| guanylate kinase [Succinatimonas hippei YIT 12066]
          Length = 213

 Score = 41.5 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 28/173 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ---RKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           LFI      GAGK++ I+ L +           V H TREP        + H + +   +
Sbjct: 8   LFIV-SAPSGAGKSSLIAALMQRFNLDDSLRLSVSHTTREPRPGETNHVSYHFVSNEEFE 66

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              A   A    A   DH     + ++   + +GK +  D        +QG R   +   
Sbjct: 67  ALIAR-NAFYEYAKVFDHYYGTSKEIVEEWINDGKDVFLD------IDWQGARLIREQSP 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  S+  + P          +    R++ R    +       E+    I
Sbjct: 120 YAK----SIFILPPSL--------EELQNRLKKRGQDSDEVIKKRMEKAKREI 160


>gi|313203673|ref|YP_004042330.1| uridine kinase [Paludibacter propionicigenes WB4]
 gi|312442989|gb|ADQ79345.1| uridine kinase [Paludibacter propionicigenes WB4]
          Length = 206

 Score = 41.5 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 23/169 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GK+T +  +   L  +   V + ++     ++       L    D   +
Sbjct: 2   LIIGIAGGTGSGKSTVVRKILERLP-QGEVVILPQDSYYRDSSHLPLEERLEINFDHPDS 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLF 116
               ++     + H++      L  GK +         C R  ++   +       + + 
Sbjct: 61  IEFELL-----VQHLKE-----LKNGKAIEQPIYSYLTCTRATETITIHPCHVIIVEGIL 110

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FER 164
           +  L    ++++M D  + +D   D  L RV NR  +     ++   ER
Sbjct: 111 V--LTNPELRDMM-DLKVFVDADADDRLIRVINRDIVERGRSVNKVMER 156


>gi|218245345|ref|YP_002370716.1| hypothetical protein PCC8801_0464 [Cyanothece sp. PCC 8801]
 gi|257058382|ref|YP_003136270.1| hypothetical protein Cyan8802_0478 [Cyanothece sp. PCC 8802]
 gi|218165823|gb|ACK64560.1| hypothetical protein PCC8801_0464 [Cyanothece sp. PCC 8801]
 gi|256588548|gb|ACU99434.1| hypothetical protein Cyan8802_0478 [Cyanothece sp. PCC 8802]
          Length = 231

 Score = 41.5 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 36/182 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62
           L ++  GI+GAGK    + L + L        +             R    +   + +  
Sbjct: 31  LLVALSGIDGAGKGHLANQLSKSLNSLGMKTIIVHGDDWLNL-PHIRFNAKNPAENFYRN 89

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--------DSSYAYQGERDSSQH 114
           G   EA+          +++I P   +       RF+        ++S  Y       + 
Sbjct: 90  GFRFEAMF---------KDLILPLKKQ-------RFIQLEANILKETSTHYLPYFYDYED 133

Query: 115 LFLDSLQEISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
           + +  L+ I +  + P      D    +D      L+R   R      +  D  E    +
Sbjct: 134 IDIIILEAIYL--IQPTFINDYDLAFWVDCSFKTALERALLRGQ-EGLSKQDTIEAYKTL 190

Query: 169 IH 170
             
Sbjct: 191 YF 192


>gi|119587443|gb|EAW67039.1| hCG2032408, isoform CRA_a [Homo sapiens]
          Length = 3663

 Score = 41.5 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1957 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2014

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2015 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2051


>gi|104782309|ref|YP_608807.1| kinase [Pseudomonas entomophila L48]
 gi|95111296|emb|CAK16016.1| putative kinase [Pseudomonas entomophila L48]
          Length = 185

 Score = 41.5 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 40/151 (26%), Gaps = 47/151 (31%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK+T    +   L      V                 +    G +E   E 
Sbjct: 4   IVILGNAGSGKSTLARAIGARL---GLPVVH------------LDRLFWEPGWEEADDEV 48

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                           +  AL  G  +      D +Y+ +       H            
Sbjct: 49  ------------FRERVVQALAGGSWV-----TDGNYSRRTFDLRLPHA----------- 80

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
               D  I LD P    L+RV  R  L+ + 
Sbjct: 81  ----DLVIWLDTPRLTCLRRVIQRSLLKPAR 107


>gi|300724648|ref|YP_003713973.1| adenosine 5'-phosphosulfate kinase [Xenorhabdus nematophila ATCC
           19061]
 gi|297631190|emb|CBJ91885.1| adenosine 5'-phosphosulfate kinase [Xenorhabdus nematophila ATCC
           19061]
          Length = 215

 Score = 41.5 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 45/196 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G+GK+T    L++ L  +    +                 LL       G   
Sbjct: 45  IWFTGLSGSGKSTLAGALEQSLFSQGVKTY-----------------LLDGDNLRHGLCR 87

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     A R +++     V +  +  G ++L         A+       +    + +Q  
Sbjct: 88  DLGFSEADRRENIRRVGEVSKLMVDAGLVVLT--------AFISPNREERQKVRELMQ-- 137

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + Q +     + +D P+D+   R   +   +++   +      +       +     A  
Sbjct: 138 AGQFIE----VYVDTPLDVCESR-DPKGLYKKARAGELLNFTGID---AVYE-----APE 184

Query: 184 QPDRCHIVDSAHSFQS 199
            PD    +D +   ++
Sbjct: 185 HPDIY--LDGSQPVEA 198


>gi|189425428|ref|YP_001952605.1| dethiobiotin synthase [Geobacter lovleyi SZ]
 gi|189421687|gb|ACD96085.1| dethiobiotin synthase [Geobacter lovleyi SZ]
          Length = 264

 Score = 41.5 bits (97), Expect = 0.077,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 12/74 (16%)

Query: 1  MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          M++GLFI+  G + G GKT   + L R L+ +  +V V +                    
Sbjct: 1  MSNGLFIT--GTDTGVGKTIVAATLARILRLRGVNVGVMKPVTSGCV---------ERNG 49

Query: 60 DEFGAEAEAIVFAA 73
          +    +AE + +AA
Sbjct: 50 ELISEDAELLAWAA 63


>gi|297528531|ref|YP_003669806.1| uridine kinase [Geobacillus sp. C56-T3]
 gi|297251783|gb|ADI25229.1| uridine kinase [Geobacillus sp. C56-T3]
          Length = 199

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 15/159 (9%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           GI+G   +GKTT  + L + L+ +   V V          E A+      G +E+    E
Sbjct: 24  GIDGLSRSGKTTLANQLSQTLREQGISVCVFHM--DDHIVERAKRY--HTGNEEW---FE 76

Query: 68  AIVFAAARLDHVENVIRPALMEGKILL--CDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                         + R      ++ L   D   D+          S  + ++ +  +  
Sbjct: 77  YYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVF-LQR 135

Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +E  P  D  + LD P +I   R  ++        ++ +
Sbjct: 136 KEWRPFFDFVVYLDCPREIRFARENDQAKQNIQKFINRY 174


>gi|219683951|ref|YP_002470334.1| hypothetical protein BLA_1476 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|219621601|gb|ACL29758.1| conserved hypothetical protein [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|289178732|gb|ADC85978.1| Hypothetical cytosolic protein [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 280

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M +   I  EG+  +GK+T  +++   L+ +  +V    E
Sbjct: 68  MRT-RLIIVEGLPDSGKSTTAAMVAAELEARGRNVVCVEE 106


>gi|150390550|ref|YP_001320599.1| guanylate kinase [Alkaliphilus metalliredigens QYMF]
 gi|149950412|gb|ABR48940.1| Guanylate kinase [Alkaliphilus metalliredigens QYMF]
          Length = 200

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 49/168 (29%), Gaps = 28/168 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  GAGK T    L          V   TR P    A       L      
Sbjct: 3   KQGLLIVVSGPSGAGKGTICKRLLEKNPEIKISVSATTRLPRKGEADGVNYQFLDKRKFQ 62

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   + E  +  A   D+     +  +   L +G  +L             E D +  L 
Sbjct: 63  EMLEKEE-FLEYAQVYDNYYGTPKEYVFENLEKGYDVLL------------EIDIAGALQ 109

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           +   +E S          +  LP   +    R+ +R +  +      F
Sbjct: 110 IK--EEFSQG------VFVFILPPSLEELKSRIISRGTESKEDIEKRF 149


>gi|307824536|ref|ZP_07654761.1| signal recognition particle-docking protein FtsY [Methylobacter
           tundripaludum SV96]
 gi|307734520|gb|EFO05372.1| signal recognition particle-docking protein FtsY [Methylobacter
           tundripaludum SV96]
          Length = 664

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ + + V +    G T  A A   +      +     A+   
Sbjct: 468 GVNGAGKTTTIGKLAKRLQAQGHSVMLAA--GDTFRAAAVEQLQTWGERNNIHVVAQH-- 523

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A  +G  +L+ D
Sbjct: 524 TGADSASVIYDGVQSAQAKGIDVLIAD 550


>gi|301117886|ref|XP_002906671.1| signal recognition particle receptor subunit alpha [Phytophthora
           infestans T30-4]
 gi|262108020|gb|EEY66072.1| signal recognition particle receptor subunit alpha [Phytophthora
           infestans T30-4]
          Length = 549

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 61/183 (33%), Gaps = 35/183 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GK+T +S +  +L+ K  +V +      T  + A     L+        E 
Sbjct: 346 IVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAA--CDTFRSGAVEQ--LNQHAKVLDVEL 401

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               +A       +  I+     G   +L D            R  +    + +L ++  
Sbjct: 402 FQKGYAKDPASVAKEAIKYGTENGYDCVLID---------TAGRMQNNEPLMRALAKLVS 452

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
               PD  +       +G   V N          D  ++  + + ++    + D  R +P
Sbjct: 453 NN-EPDLVLF------VGEALVGN----------DGIDQ--LSMFDRALADYSD--RREP 491

Query: 186 DRC 188
            R 
Sbjct: 492 HRI 494


>gi|225714490|gb|ACO13091.1| Adenylate kinase isoenzyme 1 [Lepeophtheirus salmonis]
 gi|290462527|gb|ADD24311.1| Adenylate kinase isoenzyme 1 [Lepeophtheirus salmonis]
          Length = 197

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 60/207 (28%), Gaps = 40/207 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    + R             +     + +  R  ++S            + 
Sbjct: 24  GGPGSGKGTQSEKVVRHF-----------DYTHISSGDILRAEVMSNSNRGLQ-----LY 67

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SLQEISVQEV 128
              A  D V N I   L+   ++        + A   +        ++    ++   Q  
Sbjct: 68  KLMANGDPVPNPIVNDLIAEVMV--------AKASSSKGFLVDGYPIEEKQAEDFENQIA 119

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR----NQ 184
                + LD   +I   R+  R +         F+  +  I  +  + +    +      
Sbjct: 120 PASLVLFLDCSDEILRDRLLKRGN---------FDDTEDAIKNRI-ETYNSRTKPILTKY 169

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211
            +    V++         ++  I+ EL
Sbjct: 170 INNVKKVNADQDKDQTYEDVKKIISEL 196


>gi|70727435|ref|YP_254351.1| hypothetical protein SH2436 [Staphylococcus haemolyticus JCSC1435]
 gi|68448161|dbj|BAE05745.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 220

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 35/190 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L   L     +   + E           +  L    D+F   +
Sbjct: 12  ITIAGTVGVGKSTLTQALADKL-----NFKTSFENVD-------HNPYLDKFYDDFERWS 59

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117
             +   F A R        +     G   + DR +      +A     QG  +       
Sbjct: 60  FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMNEDDFKTY 115

Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             L   + +      PD  I L+   +  ++R++ R    E          D    +K  
Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECDYNEVIERIKARGRDMEINT-------DPEYWQKLF 168

Query: 175 QIFLDIARNQ 184
           + + D   N 
Sbjct: 169 KRYEDWINNF 178


>gi|94313684|ref|YP_586893.1| hypothetical protein Rmet_4762 [Cupriavidus metallidurans CH34]
 gi|93357536|gb|ABF11624.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 383

 Score = 41.5 bits (97), Expect = 0.078,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P  T  ++                  
Sbjct: 172 IVFEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPTDTERSQW----------------- 214

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 215 ----YFQRYIQHLP-------AAGEIVLFDRSWY 237


>gi|312868904|ref|ZP_07729089.1| deoxyguanosine kinase [Lactobacillus oris PB013-T2-3]
 gi|311095578|gb|EFQ53837.1| deoxyguanosine kinase [Lactobacillus oris PB013-T2-3]
          Length = 213

 Score = 41.5 bits (97), Expect = 0.079,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 30/223 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY-------DVHVTREPGGTPAAEAARHVLLSCGV 59
           I+  G  GAGKT+   LL   L  K +        +               +   L+  +
Sbjct: 2   IALAGTIGAGKTSLTQLLADHLNSKAFYESVDDNKILPLFYKNPKKYGFLLQIYFLNKRI 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           DE     +  +    R    E+ +   L            D   A Q E D    L  + 
Sbjct: 62  DEIKDSYDNDLNVLDRSI-FEDALLFKLNA----------DMGRATQTESDIYSSLLANM 110

Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++E+  Q     PD  I + +  +  LKR++ R    E    D         ++     +
Sbjct: 111 MEELPEQPHQKAPDLLITIQVSFETMLKRIEKRGRSYEQIANDP---SLYSYYQNLNNRY 167

Query: 178 LDIARNQPDRCH-IVDSAH-----SFQSVATNILNIVWELVQK 214
            D      +    ++D           + A  +L +V   + +
Sbjct: 168 RDWYAQYDESPKMLIDGDKYDFVEDPTA-AQEVLKMVDRKLAE 209


>gi|317008830|gb|ADU79410.1| shikimate kinase [Helicobacter pylori India7]
          Length = 162

 Score = 41.5 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVVHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKIDFETLIKRLNQKEREKRPLLNDLIQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|300172988|ref|YP_003772154.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887367|emb|CBL91335.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811]
          Length = 210

 Score = 41.5 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 41/195 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT   L+               EP G                     +    +   
Sbjct: 10  GVGKTTLTGLIAEHF---GTKAFY--EPVGDNPVLPL---------YYSDPKQYGFLLQI 55

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
             L+   ++I+ AL +   +L DR  + D+ +  +  +D               +  +  
Sbjct: 56  YFLNRRFDMIKKALADDNNVL-DRSIYEDALFTSENHKDGNITDAEMSVYTQLLNNMMAE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++  +   PD  +  +   +  L R++ R    E      FE  D +     RQ +  
Sbjct: 115 LQKLPKKA--PDLLVYAETDFETILYRIKKRGRDYEQ-----FENNDAL-----RQYYFR 162

Query: 180 IARNQPDRCHIVDSA 194
           +     D     D++
Sbjct: 163 MWSAYRDWFDAYDAS 177


>gi|294615071|ref|ZP_06694957.1| deoxyguanosIne kinase [Enterococcus faecium E1636]
 gi|291592013|gb|EFF23636.1| deoxyguanosIne kinase [Enterococcus faecium E1636]
          Length = 219

 Score = 41.5 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 46/236 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++   ++      +                 A    +    V       
Sbjct: 4   IVLAGTIGAGKSSLTEMMAEHFDSQ-----------------AFYESIDDNEVLPLFYAN 46

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112
            E  A +     L+     I+ A+ +   +L DR  + DS           A + E    
Sbjct: 47  PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 105

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +
Sbjct: 106 DELLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYY 162

Query: 171 EKRRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
           ++  + +        +   I +D           + + V   I   + E+ Q +VS
Sbjct: 163 KELNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVS 218


>gi|123969278|ref|YP_001010136.1| adenylate kinase [Prochlorococcus marinus str. AS9601]
 gi|166980350|sp|A2BTB8|KAD_PROMS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|123199388|gb|ABM71029.1| Adenylate kinase [Prochlorococcus marinus str. AS9601]
          Length = 182

 Score = 41.5 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 47/216 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55
           M   L   F G  GAGK T   LL +           T         E  R  +     L
Sbjct: 1   MKKHLL--FLGAPGAGKGTQAELLSQ-----------TTSYLHLSTGELLRKEIEMNTNL 47

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
              V +     E +       + V  ++R  L++  I          +   G   +    
Sbjct: 48  GIQVKDIMNRGELV-----SDELVLKIVRQNLVKDNI---------GWILDGYPRNLSQA 93

Query: 116 FLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR- 173
             DSL E+  +   P +    LD+P ++ ++R+  R    ++          V I++K  
Sbjct: 94  --DSLNEVLSEINQPLEVVFYLDIPEEVLIERLLLRGRKDDTEETIR---TRVDIYKKTT 148

Query: 174 ---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
               Q F D++  +      +++    ++++++I  
Sbjct: 149 EPLIQYFKDLSLLEY-----INADRDLKTISSDIKQ 179


>gi|58338191|ref|YP_194776.1| deoxyguanosine kinase [Lactobacillus acidophilus NCFM]
 gi|227902622|ref|ZP_04020427.1| deoxyguanosine kinase [Lactobacillus acidophilus ATCC 4796]
 gi|108936025|sp|P0C1G0|DGK2_LACAC RecName: Full=Deoxyguanosine kinase; Short=DGK; Short=DGUO kinase;
           AltName: Full=Deoxynucleoside kinase complex I
           F-component
 gi|58255508|gb|AAV43745.1| deoxyguanosine kinase [Lactobacillus acidophilus NCFM]
 gi|227869615|gb|EEJ77036.1| deoxyguanosine kinase [Lactobacillus acidophilus ATCC 4796]
          Length = 228

 Score = 41.5 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 49/231 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121
           +  A +     L+   + I+ AL +   +L DR +   +  +Q   D  +     +D+  
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKNALTQDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106

Query: 122 EISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           E+ +  +M          PD  + +++  D  +KR++ R    E    D         ++
Sbjct: 107 EL-LHNMMGELDRMPKKNPDLLVHINVSYDTMIKRIKKRGRPYEQLSYD---STLEDYYK 162

Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211
           +  + +          P    ++D             + V   I++ + E+
Sbjct: 163 RLLRYYKPWYEKYDYSPK--MVIDGDKYDFMSSEADREIVLDQIVDKLKEV 211


>gi|297269074|ref|XP_002799822.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Macaca mulatta]
          Length = 4079

 Score = 41.5 bits (97), Expect = 0.081,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1824 VVIVGPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 1881

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 1882 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 1918


>gi|269797902|ref|YP_003311802.1| guanylate kinase [Veillonella parvula DSM 2008]
 gi|269094531|gb|ACZ24522.1| guanylate kinase [Veillonella parvula DSM 2008]
          Length = 209

 Score = 41.5 bits (97), Expect = 0.081,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 17/119 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I   G  GAGK T  + +++ +    Y V   TR P      E   +   S    E
Sbjct: 4   RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAPRVGER-EGINYFFRSKEEFE 62

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105
                +A +  A   D+     +  +   L +GK +L            +RF D+ + Y
Sbjct: 63  SLLSEDAFLEYAKVYDNYYGTPKQHVMDLLDDGKSVLLEIDIQGAMQVKERFSDAVFIY 121


>gi|302756751|ref|XP_002961799.1| hypothetical protein SELMODRAFT_77790 [Selaginella moellendorffii]
 gi|300170458|gb|EFJ37059.1| hypothetical protein SELMODRAFT_77790 [Selaginella moellendorffii]
          Length = 279

 Score = 41.5 bits (97), Expect = 0.082,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 49/229 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG---AE 65
             G   +GK T   L+     +         +      A    + + +      G     
Sbjct: 65  ISGAPASGKGTQCELITD---KYGLVHIAAGDLLRAEVAAGTENGIKAQEYMNKGQLVPN 121

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              +     RL+  +   +  L++G                  R  SQ   L++L     
Sbjct: 122 EIVVSMVKRRLEEQDAQEKGWLLDGY----------------PRSVSQAEALEALN---- 161

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171
             + P   I+L +P DI ++RV  R     +  +                  ++     E
Sbjct: 162 --IRPHVFILLQVPEDILVERVVGRRLDPVTGKIYHLTYAPPETPEIEARLTQRSDDTEE 219

Query: 172 KR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +        RQ   D+     D    VD       V ++I +I+ E+VQ
Sbjct: 220 RVKLRLKTHRQNVEDVLSIYSDVIVPVDGNRPKTEVFSSIDSILNEMVQ 268


>gi|254383408|ref|ZP_04998760.1| shikimate kinase [Streptomyces sp. Mg1]
 gi|194342305|gb|EDX23271.1| shikimate kinase [Streptomyces sp. Mg1]
          Length = 177

 Score = 41.5 bits (97), Expect = 0.082,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 41/190 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GK+T  +LL   L         T +        +   ++   G  
Sbjct: 1   MNRGPLIVLVGPMGVGKSTVGALLAERL---GVPFLDTDQDVVHRTGRSVAEIVTEDGEP 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    E    A AR                            A      +     +   
Sbjct: 58  RFR---ELEHEAVARA--------------------------VAGFPGVLALGGGAVGHG 88

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              ++   +P   I LD+ +   ++R+ +  + R     D  ER+   + ++RR ++L++
Sbjct: 89  GSRALLAGLP--VIFLDVDLAEAMRRIGS-DTGRPLLAADP-ERRWQELQDERRALYLEV 144

Query: 181 ARNQPDRCHI 190
           A     R  +
Sbjct: 145 A-----RFVV 149


>gi|110668668|ref|YP_658479.1| adenylate kinase [Haloquadratum walsbyi DSM 16790]
 gi|109626415|emb|CAJ52875.1| adenylate kinase [Haloquadratum walsbyi DSM 16790]
          Length = 222

 Score = 41.5 bits (97), Expect = 0.082,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 69/234 (29%), Gaps = 60/234 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    L         +   T         +A R       + E   E 
Sbjct: 15  ILLLGPPGAGKGTQSKRLAEEF---GLEHVTT--------GDALRGN-KQMDISEMDTEY 62

Query: 67  EAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +         +      V  ++  AL        D ++   Y     R+  Q   L S+ 
Sbjct: 63  DTPGAYMDAGELVPDAVVNKIVEEALSS-----ADGYVLDGY----PRNIEQAEVLSSIT 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------------------ 163
           E+       D  I+L +  +  + R+  R    E     + E                  
Sbjct: 114 EL-------DVAILLSVSEEELVDRLTGRRVCPECGASYHIEFEPPAETGVCDECGATLT 166

Query: 164 RKDVMIHEKRRQI---FLD----IARNQPDR--CHIVDSAHSFQSVATNILNIV 208
           ++D    E  R     + +    +  +  DR     V+   +   V  +I++++
Sbjct: 167 QRDDDTEETVRDRLRVYEENTEPVVEHYRDRDKLVTVNGETTPGDVFDSIVDVI 220


>gi|256545499|ref|ZP_05472861.1| signal recognition particle protein [Anaerococcus vaginalis ATCC
           51170]
 gi|256398895|gb|EEU12510.1| signal recognition particle protein [Anaerococcus vaginalis ATCC
           51170]
          Length = 445

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 23/139 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTTH   L R L+++  +  +       PAA     V+        G +AE  V
Sbjct: 108 GLQGSGKTTHSGKLVRKLKKEGRNPLLVALDVYRPAAIEQLKVV--------GKQAEVEV 159

Query: 71  FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           F   + D V+               +++ D            R       +D L+ I  +
Sbjct: 160 FEKGKQDPVQTANEAKEYARRNNNDVVIMD---------TAGRLQIDEDLMDELKNI-KK 209

Query: 127 EVMPDCTIILDLPVDIGLK 145
            V PD  I+L +   +G +
Sbjct: 210 AVKPD-EILLVVDAMVGQE 227


>gi|229118555|ref|ZP_04247908.1| hypothetical protein bcere0017_48210 [Bacillus cereus Rock1-3]
 gi|228664936|gb|EEL20425.1| hypothetical protein bcere0017_48210 [Bacillus cereus Rock1-3]
          Length = 283

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T  +LL   L  KN DV +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTANLLYDILIEKNIDVDLFLE 39


>gi|308182778|ref|YP_003926905.1| adenylate kinase [Helicobacter pylori PeCan4]
 gi|308064963|gb|ADO06855.1| adenylate kinase [Helicobacter pylori PeCan4]
          Length = 191

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALDKELSAQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------VEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189


>gi|290994098|ref|XP_002679669.1| adenylate kinase [Naegleria gruberi]
 gi|284093287|gb|EFC46925.1| adenylate kinase [Naegleria gruberi]
          Length = 178

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 62/207 (29%), Gaps = 42/207 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GK T  + L    +  ++     +  E              +  G    G    A
Sbjct: 2   GGPGSGKGTQCARLVEKYKFAHFSAGDLLRAETSKDTEEGKMISSYIKEGKIVPGEVTIA 61

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           ++         +  I        + L D F                  +D  ++I   + 
Sbjct: 62  LL---------KKAIMNHEDPNTVFLIDGFP-----------REMKQAVDFERQICFCQF 101

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP--- 185
                +  D P ++  KR+  R         D  E       +KR Q +++  +  P   
Sbjct: 102 ----VLFFDCPEEVLEKRLLERGKT-SGRSDDNLES-----IQKRFQTYIN--QTMPVVT 149

Query: 186 -----DRCHIVDSAHSFQSVATNILNI 207
                ++   +DS+ S   V  ++  +
Sbjct: 150 YFRAYNKVRTIDSSKSVDLVFEDVCKL 176


>gi|282860152|ref|ZP_06269227.1| deoxynucleoside kinase [Prevotella bivia JCVIHMP010]
 gi|282587041|gb|EFB92271.1| deoxynucleoside kinase [Prevotella bivia JCVIHMP010]
          Length = 204

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 30/195 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT  ++L +             EP                 +  +    
Sbjct: 3   IAIAGNIGSGKTTLTTMLAKR---------YDWEPRFESVDYNPYLDDYYKDLKRWSFPM 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118
           E         D +E         GK ++ DR +         ++YA           +++
Sbjct: 54  EVFFLKERFKDLLE-----INQCGKPVVQDRSIYEGVYVFTENNYAMGNLDTRDYETYME 108

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             ++++    +PD  I L   V   +  ++ R    E        +  +   E   + + 
Sbjct: 109 LFEDLTDIVKLPDLMIYLRSSVSHLVANIEKRGRSYEQ-------KMPLGYLENINKRYE 161

Query: 179 D-IARNQPDRCHIVD 192
           D I      R  IVD
Sbjct: 162 DFILNKYKGRVLIVD 176


>gi|253747872|gb|EET02346.1| Adenylate kinase [Giardia intestinalis ATCC 50581]
          Length = 193

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 50/220 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I F G+ GAGK+T ++ L   L+   + +  T         +  R  +        G 
Sbjct: 2   RIIHFLGVPGAGKSTVVNRLC--LE---HPLCTT-----LYIGQIVREEI--QKQTPLGR 49

Query: 65  EAEAIVFAAAR--LDHVENVIRPALMEGK-----ILLCD---RFLDSSYAYQGERDSSQH 114
           E + ++  A     D +  + +  +   +     ILL D   R  D + AY         
Sbjct: 50  ELQLMLSQANVLPADAIVPLFQQEIKRHEAARTSILLVDGFPRSADQARAY--------- 100

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                LQ        P  T+ L    ++    +  R   R+ +     +  + +IH++  
Sbjct: 101 -----LQHFGH----PSLTLCLTASTEV----ITERLMARQQSATSRLDDTEEIIHQRIA 147

Query: 175 QIF------LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +      LD+      +   +DS+  F  V  ++  ++
Sbjct: 148 KAWEHVQPGLDVYIENNCKVETIDSSGCFDEVYASVTGVL 187


>gi|125583882|gb|EAZ24813.1| hypothetical protein OsJ_08592 [Oryza sativa Japonica Group]
          Length = 141

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 8/87 (9%)

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180
           +V ++ P   +  D   +   +R+  R   R    ++   ++  +  E      + +   
Sbjct: 43  NVTKITPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYY--- 99

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
             N  D+   +D+A     V  ++  I
Sbjct: 100 --NAKDKVKKIDAAKPIPEVFEDVKAI 124


>gi|52078509|ref|YP_077300.1| deoxyadenosine/deoxycytidine kinase [Bacillus licheniformis ATCC
           14580]
 gi|52783872|ref|YP_089701.1| deoxyadenosine/deoxycytidine kinase [Bacillus licheniformis ATCC
           14580]
 gi|319648537|ref|ZP_08002752.1| dck protein [Bacillus sp. BT1B_CT2]
 gi|52001720|gb|AAU21662.1| deoxyadenosine/deoxycytidine kinase [Bacillus licheniformis ATCC
           14580]
 gi|52346374|gb|AAU39008.1| Dck [Bacillus licheniformis ATCC 14580]
 gi|317389385|gb|EFV70197.1| dck protein [Bacillus sp. BT1B_CT2]
          Length = 213

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 52/161 (32%), Gaps = 28/161 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    +          T   E   +  L     +F   +
Sbjct: 12  ITVAGTVGVGKSTLTKELAKRL---GFK---------TSLEEVVNNPYLEAFYQDFERWS 59

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFL 117
             +   F A R        +     G   + DR +          +A +G      +   
Sbjct: 60  FHLQIFFLAERF----KEQKYIYESGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTY 115

Query: 118 DSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
            SL E   ++     PD  + L+  ++  L R+Q R    E
Sbjct: 116 TSLFEAMVMTPYFPRPDVLVYLEGDLETILDRIQKRGREME 156


>gi|28210904|ref|NP_781848.1| guanylate kinase [Clostridium tetani E88]
 gi|32171437|sp|Q895Q5|KGUA_CLOTE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|28203343|gb|AAO35785.1| guanylate kinase [Clostridium tetani E88]
          Length = 208

 Score = 41.5 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 47/215 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSC 57
           M  GL I   G  G GK T     K  L+  N+       TR+P        + + +   
Sbjct: 1   MEKGLLIVISGPSGTGKGTVC---KELLRNNNFWFSVSSTTRDPREGEIQGKSYYFMSKE 57

Query: 58  GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             ++   E + + +A    ++    ++ +   L +GK ++ +  +D   A Q + +  + 
Sbjct: 58  EFEDKIKENDFLEYAKVYGNYYGTPKSKVIEMLDKGKDVILE--IDIQGALQVKENYKEG 115

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +F+                 IL  P   +    R+  R +  E + +  F+         
Sbjct: 116 IFI----------------FIL--PPSMEELKNRIIKRGTETEESLMTRFKS-------- 149

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
               + +I         +V+       V   +  I
Sbjct: 150 ---AYKEINYVSKYNYAVVN-----DKVHDAVEKI 176


>gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
 gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739]
          Length = 453

 Score = 41.5 bits (97), Expect = 0.084,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 15/127 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT ++ L R+ Q+  Y V V       P A +  + ++   G++ FG   E  
Sbjct: 112 GIQGSGKTTSVAKLSRYFQKHGYKVGVVCSDTWRPGAYQQLKQLIEPYGIEVFGNPEE-- 169

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 +   +  +     +G  ++    +DS       R   +   ++ +++I    + 
Sbjct: 170 ---KNAIKLAKEGVEYFKKKGVDVII---VDS-----AGRHKEEKGLIEEMRQI-SNTIN 217

Query: 130 PDCTIIL 136
           P   I++
Sbjct: 218 PHEVILI 224


>gi|240850814|ref|YP_002972214.1| adenylate kinase [Bartonella grahamii as4aup]
 gi|240267937|gb|ACS51525.1| adenylate kinase [Bartonella grahamii as4aup]
          Length = 192

 Score = 41.5 bits (97), Expect = 0.084,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 39/211 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   +L                       +  R V+      E G +A+AI+
Sbjct: 7   GPPGAGKGTQAKMLTEE-----------YNIPHLSTGDMLREVI--AKETEIGKKAKAII 53

Query: 71  FAAARL-DHVENVIRPALMEGKILLCDRFLDS----SYAYQGERDSSQHLFLDSLQEISV 125
            + A + D++ N I          + DR  ++     +   G   +      ++LQ+I  
Sbjct: 54  SSGALVPDNIVNQI----------VSDRIDETDCVNGFVLDGYPRTVGQA--EALQQILQ 101

Query: 126 -QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
            + +  D  I L +  D+ ++R++ R      +      +   V   ++  + + +    
Sbjct: 102 SKNMRLDAVIELCVDEDVLIERMKKRVEETIAAGGQVRLDDNPVAFAKRLVE-YREKTAP 160

Query: 180 IARNQPDR--CHIVDSAHSFQSVATNILNIV 208
           +++   +R    ++D       V   I   +
Sbjct: 161 LSKFYSERGMLKVIDGMIGITEVTRMIRGFL 191


>gi|225463006|ref|XP_002264815.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 518

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 51/242 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   ++ +     +    D+  +    G+     A+  +          +
Sbjct: 2   ISGAPASGKGTQCEMIVQKFGLVHISTGDLLRSEVSSGSEIGNKAKEYM---DTGRLVPD 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              I+   AR+   +   +  L++G                  R  +Q   L+ L+    
Sbjct: 59  EVVIMMVTARISQEDAKEKGWLLDGF----------------PRTFAQAQSLEKLK---- 98

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDYF--ERKDV---------MIHE 171
             + PD  I+LD+P  I + R   R     +     L +F  E +++            E
Sbjct: 99  --IRPDVYIVLDVPDQILIDRCVGRRVDPVTGKIYHLKFFPSENEEIKARLVTRSDDTEE 156

Query: 172 KRRQIFLDIARNQPDRCH--------IVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           K +   L+I +   +            VD  HS   V   I +++ ++ Q + + +  +K
Sbjct: 157 KVKSR-LEIYKKNAEAILSTYSTIMNKVDGNHSKDEVFKPIDSLLSKMQQDKENMMKLEK 215

Query: 224 DI 225
            I
Sbjct: 216 SI 217


>gi|225389116|ref|ZP_03758840.1| hypothetical protein CLOSTASPAR_02862 [Clostridium asparagiforme
           DSM 15981]
 gi|225044823|gb|EEG55069.1| hypothetical protein CLOSTASPAR_02862 [Clostridium asparagiforme
           DSM 15981]
          Length = 499

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 14/102 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH-VTREPGGTPAAEAARHVLLSCG 58
           I+  G  G GKTT I+LL RF       +Q   +DV  VTR+   T      +   L  G
Sbjct: 376 IAIVGPTGCGKTTVINLLMRFYDVDSGSIQVDGHDVRNVTRKSLRTNFGMVLQETWLKSG 435

Query: 59  VDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILL 94
                         E  +  AAR  H  + I+        ++
Sbjct: 436 TIRENIAYGKPDATEEEIVQAAREAHAYSFIKRMPQGYDTVI 477


>gi|149727798|ref|XP_001490951.1| PREDICTED: similar to deoxyguanosine kinase [Equus caballus]
          Length = 276

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 74/234 (31%), Gaps = 51/234 (21%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQR-----------KNYDVHVTREPGGTPAAEAARHVLLS 56
           S EG    GK+T + LL +               +N     T++   T +      ++  
Sbjct: 42  SIEGNIAVGKSTFVKLLMKTYPEWHIATEPVATWQNIQAVGTQKACTTQSLGNLLDMM-Y 100

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGER 109
                +    +   F +     +E +    L  GK +         DR++ +    +   
Sbjct: 101 QEPARWSYMFQTFSFMSRLKIQLEPLPEKLLQAGKAVQIFERSVYSDRYIFA----KNLF 156

Query: 110 DSSQHLFLDS----------LQEIS----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           ++     ++           LQE +    +        I L     + LKR+  R    E
Sbjct: 157 ENGSLSDIEWHIYQEWHSFLLQEFASRLRLHGF-----IYLRATPQVCLKRLHQRAREEE 211

Query: 156 SA-CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
               L Y E+     +  ++H   +  F  +  N P    ++D  + F  V   
Sbjct: 212 RGIELTYLEQLHDQHEAWLVHRTTKLHFETLV-NIP--VLVLDVNNDFSEVTKQ 262


>gi|20093462|ref|NP_613309.1| cytidylate kinase [Methanopyrus kandleri AV19]
 gi|22001657|sp|Q8TZB3|KCY_METKA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|19886285|gb|AAM01239.1| Cytidylate kinase [Methanopyrus kandleri AV19]
          Length = 193

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 39/215 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G+ G+G TT    L               +     A E    +     V E   + 
Sbjct: 8   ITIGGLPGSGTTTMARRLAEHY---GLKHVYAGKIFREMAEERGMDLEEFSKVAEDNPDI 64

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +  +    R        R A  EG ++L  R   +++   GE D  +   L +L+     
Sbjct: 65  DLEI---DRRQ------REAAEEGDVILEGR--LAAFVAAGELDHVKGPDLATLK----- 108

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF------LDI 180
                  I L  P+++  +RV  R  +         + ++    ++ ++I+      L +
Sbjct: 109 -------IWLKAPLEVRAERVAKREGIDVEEARRRIQEREKSELKRYKEIYGVDPTDLSL 161

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQK 214
                    ++D++  S     + +   +  L+++
Sbjct: 162 YD------LVLDTSRWSEDETFSILKAAIDPLLER 190


>gi|307106381|gb|EFN54627.1| hypothetical protein CHLNCDRAFT_11683 [Chlorella variabilis]
          Length = 155

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 25/132 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G+  +GK+T  + L    +++  +V V  E   +   +           ++    
Sbjct: 3   LIVISGLPCSGKSTAAAALAEVCRQRGQEVQVVDE--DSVHLQRNISYAADAASEKVARG 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGERDSSQ---H 114
              ++ A  R           L   +I++ D        R+     A Q           
Sbjct: 61  T--LLSAMDR----------CLTRSRIVIFDTHNNIKGYRYQLWCIARQAATRYCLVHVD 108

Query: 115 LFLDSLQEISVQ 126
              D+ ++ + Q
Sbjct: 109 TPPDTCRQWNQQ 120


>gi|294795095|ref|ZP_06760230.1| putative conjugative relaxase domain protein [Veillonella sp.
           3_1_44]
 gi|294454457|gb|EFG22831.1| putative conjugative relaxase domain protein [Veillonella sp.
           3_1_44]
          Length = 861

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 2   NSGLFISFEGIEGAGKTT---HISLLKRFLQRKNYDVHVTREPG 42
           +S  +I+ EGI G+GKTT      LL      +  +V      G
Sbjct: 442 SSNKYIAVEGIAGSGKTTMLEQAKLLYE---SQGVNVIGMAFTG 482


>gi|269797507|ref|YP_003311407.1| TrwC relaxase [Veillonella parvula DSM 2008]
 gi|269094136|gb|ACZ24127.1| TrwC relaxase [Veillonella parvula DSM 2008]
          Length = 861

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 2   NSGLFISFEGIEGAGKTT---HISLLKRFLQRKNYDVHVTREPG 42
           +S  +I+ EGI G+GKTT      LL      +  +V      G
Sbjct: 442 SSNKYIAVEGIAGSGKTTMLEQAKLLYE---SQGVNVIGMAFTG 482


>gi|158320596|ref|YP_001513103.1| cytidylate kinase [Alkaliphilus oremlandii OhILAs]
 gi|226723073|sp|A8MFE4|KCY_ALKOO RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|158140795|gb|ABW19107.1| cytidylate kinase [Alkaliphilus oremlandii OhILAs]
          Length = 217

 Score = 41.5 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 85/231 (36%), Gaps = 49/231 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFG 63
           I+ +G  GAGK+T    +   L                      R +   +L+  +D   
Sbjct: 6   IAIDGPAGAGKSTIAKRIAERL-----------NITYIDTGAMYRALTYKVLANNIDITN 54

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRF--LDSSYAYQGERDSSQHLFLD 118
            +    +   + +  ++  I    ++GK++   +  R   ++   ++  +    + + +D
Sbjct: 55  EKTIIELAQNSNIQFLQENI---YLDGKMINEEI--RSIEINKKVSHVAKIKEVREILVD 109

Query: 119 SLQEISVQ------------EVMPDCT--IILDLPV-DIGLKRVQNRYSLRESACLDYFE 163
           + ++I++              V+P+ T  I L   V +  L+R            +D  E
Sbjct: 110 AQRKIALGQDVIMDGRDIGTHVLPNATLKIFLTASVQERALRRYLELKKKGIEVDIDELE 169

Query: 164 RKDVMIHEK----RRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVW 209
           +    I  +     ++ F  + + Q     I+D+   + + V   I+N++ 
Sbjct: 170 K---DIMNRDNIDSQRAFAPLVKAQDA--IIIDTTGLTIEDVVERIINLLK 215


>gi|308506977|ref|XP_003115671.1| hypothetical protein CRE_18504 [Caenorhabditis remanei]
 gi|308256206|gb|EFP00159.1| hypothetical protein CRE_18504 [Caenorhabditis remanei]
          Length = 473

 Score = 41.5 bits (97), Expect = 0.086,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 33/110 (30%), Gaps = 3/110 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L  F +   + V    E          +   L           
Sbjct: 80  IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDAQQSYIFQR- 138

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             ++    ++++   N          +++CDR      AY    D SQ L
Sbjct: 139 -DLLATMHQIENTFFNQASAIKDRNVLVICDRGCMDPSAYSSPEDWSQML 187


>gi|212695490|ref|ZP_03303618.1| hypothetical protein ANHYDRO_00006 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846141|ref|ZP_08169235.1| signal recognition particle protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|212677490|gb|EEB37097.1| hypothetical protein ANHYDRO_00006 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481734|gb|EGC84769.1| signal recognition particle protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 445

 Score = 41.5 bits (97), Expect = 0.086,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 23/139 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTTH   L R L+++  +  +       PAA     V+        G +AE  V
Sbjct: 108 GLQGSGKTTHSGKLVRKLKKEGRNPLLVALDVYRPAAIEQLKVV--------GGQAEVEV 159

Query: 71  FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           F   + D V+               +++ D            R       +D L+ I  +
Sbjct: 160 FEKGKQDPVKTANEAKEYARRNNNDVVIMD---------TAGRLQIDEDLMDELKNI-KK 209

Query: 127 EVMPDCTIILDLPVDIGLK 145
            V PD  I+L +   +G +
Sbjct: 210 AVKPD-EILLVVDAMVGQE 227


>gi|194365198|ref|YP_002027808.1| hypothetical protein Smal_1420 [Stenotrophomonas maltophilia
           R551-3]
 gi|194348002|gb|ACF51125.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 170

 Score = 41.5 bits (97), Expect = 0.086,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 36/179 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T    L + L  +   V ++ +             L +   D+  + A+ +  AA
Sbjct: 21  GAGKST----LSQQLAAQPRSVLISED-----------AWLAALYPDQIHSIADYLQCAA 65

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-SLQEISVQEVMPDC 132
           A  D +   +R  L  G  ++ D   ++  + +  R+      +   L            
Sbjct: 66  ALRDVLTQHVRAILKAGVSVVLDFPFNTPASREWGRELFDSAGVAHQLH----------- 114

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
              LD+P  I   R++ R +  E      F+  D    +  R     +A    +   ++
Sbjct: 115 --FLDVPDPICKARLRARNARGEHP----FQASDEAFEQITRHF---VAPAATEGFVVI 164


>gi|18976856|ref|NP_578213.1| GTPase [Pyrococcus furiosus DSM 3638]
 gi|18892461|gb|AAL80608.1| GTP binding protein [Pyrococcus furiosus DSM 3638]
          Length = 248

 Score = 41.5 bits (97), Expect = 0.086,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 11/102 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK----------NYDVHVTREPGGTPAAEAARHVL 54
           + I+F G  G+GKTT      R+L+              +    +           R ++
Sbjct: 1   MIIAFLGTAGSGKTTLTGAFGRYLEENYRVAYVNLDTGVENLPYKPDIDVRDFITVRDLM 60

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    GA  E+      R++H  N I         +L D
Sbjct: 61  KE-GYGPNGAIVESYDRLLTRVEHYINKILELEKSNDYVLID 101


>gi|330828337|ref|YP_004391289.1| sulfate adenylyltransferase, large subunit [Aeromonas veronii B565]
 gi|328803473|gb|AEB48672.1| Sulfate adenylyltransferase, large subunit [Aeromonas veronii B565]
          Length = 196

 Score = 41.5 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 44/207 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T    L++ L  +    +                 LL       G   
Sbjct: 27  IWFTGLSGAGKSTLAGALEQALAAQGKHTY-----------------LLDGDNVRHGLCG 69

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     AAR +++     V +  +  G I+L         A+     + + L    L E 
Sbjct: 70  DLGFDDAARQENIRRVGEVAKLMVDAGLIVLT--------AFISPFRAERALVRSLLGE- 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              E +    + +D P+ I  +R       +  A        ++         +   A  
Sbjct: 121 --GEFVE---VFVDAPLAICEERDPKGLYKKARAG-------EITNFTGIDSAYE--APE 166

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210
           QP+  H++++     ++   +L  + +
Sbjct: 167 QPE-IHLLNAGKPLDTLVEELLTALRQ 192


>gi|296332945|ref|ZP_06875403.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|296149909|gb|EFG90800.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
          Length = 221

 Score = 41.5 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    +   +  E    P  E   H       + +    
Sbjct: 12  ITVAGTVGVGKSTLTKALAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119
           +   F A R        +     G   + DR  + D+       A +G      +    S
Sbjct: 63  QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKIDYKTYTS 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175
           L E   ++     PD  I L+  ++  L R++ R    E      Y+E     +H +   
Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEERGREMELQTSRSYWE----EMHTRYEN 173

Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               F    + + + +   +++   S +++   I +++ E
Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDESSIENIVDQIASVIHE 213


>gi|281202878|gb|EFA77080.1| signal recognition particle receptor alpha subunit [Polysphondylium
           pallidum PN500]
          Length = 669

 Score = 41.5 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GK+T+++ +  +L    Y V +      T  + A     L    +    E 
Sbjct: 464 IVFSGVNGVGKSTNLAKICYWLTAHGYKVMMAA--CDTFRSGAIEQ--LKTHAERLNVEV 519

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               +           I  A      ++L D            R  +    + +L ++  
Sbjct: 520 FERGYGKDAASIAGEAIDYARATNHDVVLID---------TTGRMQNNEPLMRALSKLVN 570

Query: 126 QEVMPDCTII 135
           Q  + D  + 
Sbjct: 571 QNTI-DLVLF 579


>gi|253687392|ref|YP_003016582.1| Shikimate kinase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259585306|sp|C6DB04|AROL_PECCP RecName: Full=Shikimate kinase 2; Short=SK 2
 gi|251753970|gb|ACT12046.1| Shikimate kinase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 173

 Score = 41.5 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 44/211 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  G GKTT    L + L    YD   T              V+   G  
Sbjct: 1   MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F                       AL +   +  +R + ++    G            +
Sbjct: 56  GFRQRESL-----------------ALQQ---VTSNRCIIAT----GGGMVLAEANRRFM 91

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178
            +           I L    ++  +R++      +   L      +++      R+  + 
Sbjct: 92  HDKGT-------VIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +A       H++D++ + +++  ++L  + 
Sbjct: 145 GVAH------HVIDASQAPEAIVASVLKALR 169


>gi|119587444|gb|EAW67040.1| hCG2032408, isoform CRA_b [Homo sapiens]
          Length = 2231

 Score = 41.5 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1644 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 1701

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 1702 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 1738


>gi|113869037|ref|YP_727526.1| deoxynucleoside kinase [Ralstonia eutropha H16]
 gi|113527813|emb|CAJ94158.1| deoxynucleoside kinase [Ralstonia eutropha H16]
          Length = 213

 Score = 41.5 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 26/176 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G+GKT+    L R LQ +         P     +                 + 
Sbjct: 8   IVVEGPVGSGKTSLAQRLARTLQAQ-------ELPDSARRSPFLEPFYRDPARHALALQL 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEIS 124
             +     R   ++      L   +++      +   A        +     L     I+
Sbjct: 61  WCL---TQRAVQLQQWQAGVLAGQRMV-----TNFLMAKDRLHAALTLSDDELALYDAIA 112

Query: 125 VQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHE 171
            +  +P    D  I+L     +  +R+  R    E+   +++ ++       + H 
Sbjct: 113 ARLDLPPQRADLVIVLQATPSLLRERIVRRGEPGEAGIDEHYLQRLAGAYGELFHR 168


>gi|170764158|ref|ZP_02633280.2| guanylate kinase [Clostridium perfringens E str. JGS1987]
 gi|170661352|gb|EDT14035.1| guanylate kinase [Clostridium perfringens E str. JGS1987]
          Length = 215

 Score = 41.5 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 61/217 (28%), Gaps = 56/217 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          V   TR+P          H L      
Sbjct: 8   NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRKPRVGEVDGVNYHFLTKEEFK 67

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +  AE + +       +H E          + +   L EGK ++                
Sbjct: 68  QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 105

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
                    ++E +          I  LP   +   +R+  R S    + +  F+     
Sbjct: 106 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 156

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200
                   + +I         +V     D+    +++
Sbjct: 157 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 186


>gi|260775896|ref|ZP_05884792.1| type IV secretory pathway VirD4 component [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608312|gb|EEX34481.1| type IV secretory pathway VirD4 component [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 604

 Score = 41.5 bits (97), Expect = 0.088,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 7/104 (6%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR---HVLLSC-GVDEFGA 64
            EG  G+GK+  I     +++ +     V  + G +      R    VLL+         
Sbjct: 186 IEGTTGSGKSVLIREFLAWIRARGDRAVV-YDKGCSFVGTFYRPETDVLLNPYDARSVNW 244

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQ 106
           +  A    AA  +H  + + PA  +G        R + +S A Q
Sbjct: 245 DLWADATDAADFEHQASALIPASPQGDPFWNESARSVFASVARQ 288


>gi|261207167|ref|ZP_05921856.1| deoxynucleoside kinase [Enterococcus faecium TC 6]
 gi|289565288|ref|ZP_06445739.1| deoxyguanosine kinase [Enterococcus faecium D344SRF]
 gi|260078795|gb|EEW66497.1| deoxynucleoside kinase [Enterococcus faecium TC 6]
 gi|289162944|gb|EFD10793.1| deoxyguanosine kinase [Enterococcus faecium D344SRF]
          Length = 217

 Score = 41.5 bits (97), Expect = 0.088,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 78/234 (33%), Gaps = 42/234 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++   ++      +  Y+     E      A                 E
Sbjct: 2   IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114
             A +     L+     I+ A+ +   +L DR  + DS           A + E      
Sbjct: 47  QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +++
Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162

Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
             + +        +   I +D           + + V   I   + E+ Q +VS
Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVS 216


>gi|312879952|ref|ZP_07739752.1| guanylate kinase [Aminomonas paucivorans DSM 12260]
 gi|310783243|gb|EFQ23641.1| guanylate kinase [Aminomonas paucivorans DSM 12260]
          Length = 194

 Score = 41.5 bits (97), Expect = 0.089,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 71/222 (31%), Gaps = 39/222 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G+     G  GAGK T   LL + L    Y V   TR+P          H +     
Sbjct: 1   MSRGILFVLSGPSGAGKGTLRRLLFQRLPGLAYSVSCTTRQPRPGETEGVEYHFVSEEAF 60

Query: 60  DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
            E  A+    +  A   DH      + +R  L  G  ++ +  +D   A Q ++   +  
Sbjct: 61  REMIAQGR-FLEWAKVHDHFYGTRASDVREVLERGLDVVLE--IDVQGALQVKKAIPEA- 116

Query: 116 FLDSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                            T+ +D P V+   +R+  R +                      
Sbjct: 117 ----------------VTLFIDPPSVEELERRLSCRGTEAPEERRLRLMNAKAE------ 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
              ++ AR+   R          +    ++ ++V     KR+
Sbjct: 155 ---MEQARSYDHRVV----NDHLEEALEDLAHLVEFYRGKRM 189


>gi|116334119|ref|YP_795646.1| deoxynucleoside kinase [Lactobacillus brevis ATCC 367]
 gi|116099466|gb|ABJ64615.1| Deoxynucleoside kinase [Lactobacillus brevis ATCC 367]
          Length = 215

 Score = 41.5 bits (97), Expect = 0.089,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 33/158 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           G GKTT    +   L           EP G  P                   +    +  
Sbjct: 10  GVGKTTLTGKIASHL---GTQAFF--EPVGDNPVLPLYYR----------DPKQYGFLLQ 54

Query: 73  AARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLD 118
              L+   ++I+ AL +   +L DR  + D+ +  +   +                  ++
Sbjct: 55  IYFLNKRFSMIKRALADDNNVL-DRSIYEDALFTRENNAEGNITDTELEVYLNLLDNMMN 113

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
            L E+  +   PD  +  D   D  L R++ R    E 
Sbjct: 114 ELNELPKKA--PDLLVYADADFDTILHRIKKRGRDYEQ 149


>gi|158320456|ref|YP_001512963.1| guanylate kinase [Alkaliphilus oremlandii OhILAs]
 gi|158140655|gb|ABW18967.1| Guanylate kinase [Alkaliphilus oremlandii OhILAs]
          Length = 200

 Score = 41.5 bits (97), Expect = 0.089,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 28/169 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           + GL I   G  GAGK T    L     +    +   TR+P      +   +  +     
Sbjct: 3   SKGLLIVVSGPSGAGKGTICKELLNQNPQIKVSISATTRQPRNGEI-KGINYFFIDKNKF 61

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   + +  +  A   D+     +  +   L +G  +L                    L 
Sbjct: 62  ELMIKNDDFLEYATVYDNYYGTPKEYVMKNLEDGNDVL--------------------LE 101

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           +D +  + +++   D   I  LP    L+ ++NR   R +  L   E++
Sbjct: 102 IDIVGALQIKDRFKDAVFIFILPP--SLEELKNRIVGRGTESLADIEKR 148


>gi|197337770|ref|YP_002158247.1| hypothetical protein VFMJ11_A0698 [Vibrio fischeri MJ11]
 gi|197315022|gb|ACH64471.1| conserved hypothetical protein [Vibrio fischeri MJ11]
          Length = 181

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKNYDVHVTR 39
          M    FI F G  G+GKTT I+ LK       +     V  T+
Sbjct: 1  MYKDNFIVFTGGPGSGKTTVINELKARDFFCSEEAGRKVIQTQ 43


>gi|194391182|dbj|BAG60709.1| unnamed protein product [Homo sapiens]
          Length = 179

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------NQPD 186
            +  D   +I ++R   R      +  +    + +   EKR Q +L   +       +  
Sbjct: 100 VLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKPIIDLYEEMG 153

Query: 187 RCHIVDSAHSFQSVATNILNI 207
           +   +D++ S   V   ++ I
Sbjct: 154 KVKKIDASKSVDEVFDEVVQI 174


>gi|260903784|ref|ZP_05912106.1| Dephospho-CoA kinase [Brevibacterium linens BL2]
          Length = 386

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 75/223 (33%), Gaps = 44/223 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           GI GAGK+T   +L               +V    EP     A+     +++       A
Sbjct: 9   GI-GAGKSTVSEILADHGAAIIDADKIAREVVAPGEPLLAQLAQRFGEDVIADDGGLDRA 67

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +    + AAA  D        ALM     + DR    + A+     +   + +  +  + 
Sbjct: 68  Q----LAAAAFGDEESTAALNALMHPA--IRDR----TIAHF-AEHADAEVVVHDVPLLV 116

Query: 125 VQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              + P     +++D+P ++ L+R+ +   +  +                          
Sbjct: 117 ENGMTPSYHLNLLVDVPAELRLQRLMSARGMDRADAESRI----------------ARQA 160

Query: 183 NQPDRC----HIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
               R      I+D+A       ++  + V  LV+ R+ P ++
Sbjct: 161 TDEQRYAVCDVIIDNAGEV----SDTRDTVARLVEDRIFPFAA 199


>gi|58584837|ref|YP_198410.1| guanylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|75497743|sp|Q5GS56|KGUA_WOLTR RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|58419153|gb|AAW71168.1| Guanylate kinase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 195

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 37/219 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ +      GAGKTT +  L          V   TR+P            +      
Sbjct: 5   NEGVLLVLSSPSGAGKTTILERLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTKKEFH 64

Query: 61  EFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   EA  ++  A   ++   +    I   L  G  +L       S  +QG     + + 
Sbjct: 65  ELC-EAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLL------SIDWQGAFHLFELMR 117

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              +              IL  P    ++ ++ R   R S      E        +  + 
Sbjct: 118 EKVIS-----------VFIL--PP--SMEELRLRLQKRNSDSASEIE-------HRLAEA 155

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV-WELVQK 214
             ++++       +++           I +I+  E +++
Sbjct: 156 QKEMSKRDKYDYVVIN--DDIDKSVEEISSILDKERLKR 192


>gi|194335555|ref|YP_002017349.1| Guanylate kinase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308032|gb|ACF42732.1| Guanylate kinase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 194

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 61/216 (28%), Gaps = 36/216 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F    G GK+T  +++   +    + V  T         E   +  L+    E
Sbjct: 7   HKGKLIVFSAPSGTGKSTIATMVLERIPNIQFSVSATTRTKRAGEQEGVNYYFLTREEFE 66

Query: 62  FGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                    E   F       + +     +  G  +L D             D    + +
Sbjct: 67  EKIRNGGFIEHEFFFGNHYGTLLDKTEQIIDRGTHMLLD------------LDVKGAMNV 114

Query: 118 DSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             L   +         + L  P +++  +R++ R S  E +     ER  + +       
Sbjct: 115 RQLFPGNS------LLLFLKPPSIEVLEERLKGRESEDEESLKARLERARLEL------G 162

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +   A    +                 +  IV + +
Sbjct: 163 Y---ADRFDEVIV----NDHLDDAVEAVTAIVSKFL 191


>gi|327269108|ref|XP_003219337.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Anolis
            carolinensis]
          Length = 4302

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  GAGK+T   +L+  L +    V   ++    P A   R +L   G  +     
Sbjct: 1972 VVIVGPSGAGKSTLWRMLRAALGKIGKVV---KQYTMNPKAMPRRQLL---GHIDMDTRE 2025

Query: 67   EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +  ++  +AR   V  +  P +     ++CD                   +++SL  +
Sbjct: 2026 WSDGVLTNSAR-QVVREL--PDVTS--WIICD-------------GDIDPEWIESLNSV 2066


>gi|300690553|ref|YP_003751548.1| deoxyadenosine kinase [Ralstonia solanacearum PSI07]
 gi|299077613|emb|CBJ50248.1| putative Deoxyadenosine kinase [Ralstonia solanacearum PSI07]
          Length = 214

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 22/177 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT     L   L+       +   P   P                   + 
Sbjct: 9   IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQE-I 123
             ++  A RL         A   G+ ++ D FL  D  +A Q    + +    D++ + +
Sbjct: 62  RFLLQRAQRLAA----WHKATQAGERIVADSFLPRDRLFA-QLTLPADELALYDAMAQAL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ +   D  + L    +  L R+  R    ES         D    E+    + ++
Sbjct: 117 ALPQQRIDLVVCLQARAEDLLPRIAKRAVPYESGI-------DAEYLERICAAYGEL 166


>gi|262341071|ref|YP_003283926.1| guanylate kinase [Blattabacterium sp. (Blattella germanica) str.
          Bge]
 gi|262272408|gb|ACY40316.1| guanylate kinase [Blattabacterium sp. (Blattella germanica) str.
          Bge]
          Length = 191

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 14/38 (36%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M  G  I   G  G+GKTT    L        + V  T
Sbjct: 1  MKKGKMIILSGPSGSGKTTISHCLLSKFPDLKFSVSCT 38


>gi|241762575|ref|ZP_04760649.1| kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241372836|gb|EER62533.1| kinase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 172

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I F G+ G GKTT   LL + L      V
Sbjct: 1  MLIVFTGLPGCGKTTIAQLLSKKLSAVYIRV 31


>gi|227550903|ref|ZP_03980952.1| deoxyguanosine kinase [Enterococcus faecium TX1330]
 gi|293379315|ref|ZP_06625461.1| deoxynucleoside kinase [Enterococcus faecium PC4.1]
 gi|227180001|gb|EEI60973.1| deoxyguanosine kinase [Enterococcus faecium TX1330]
 gi|292642111|gb|EFF60275.1| deoxynucleoside kinase [Enterococcus faecium PC4.1]
          Length = 219

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 36/231 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++   ++      +  Y+     E      A                 E
Sbjct: 4   IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 48

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114
             A +     L+     I+ A+ +   +L DR  + DS           A + E      
Sbjct: 49  QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 107

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
           L  + ++E+  +  +  PD  + + +  D  L+R++ R    E    D         ++ 
Sbjct: 108 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLSFDPSLYDYYKELNR 167

Query: 172 KRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +  Q + +       +   DR + V+ + + + V   I   + E+ Q  ++
Sbjct: 168 RYDQWYEEYKESPKIQIDGDRYNFVEDSQAKEEVLKMIEEKLAEIRQTELA 218


>gi|148224441|ref|NP_001089007.1| deoxycytidine kinase, gene 1 [Xenopus laevis]
 gi|37780367|gb|AAO64436.1| deoxycytidine kinase 1 [Xenopus laevis]
 gi|133737001|gb|AAI33782.1| DCK1 protein [Xenopus laevis]
          Length = 265

 Score = 41.5 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 41/242 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54
           IS EG    GK+T +++L +    ++++V    + R        +    +         L
Sbjct: 26  ISIEGNIATGKSTFVNILTKA--SEDWEVVPEPIARWCNIQSCKDEFEELTNSQKSGGNL 83

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104
           L    ++    +      A     R         ++    P L   + +  DR++ +S  
Sbjct: 84  LQMMYEKPERWSFTFQSYACLSRIRAQLKALGGKLKESENPVLFFERSVYSDRYIFASNL 143

Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
           Y+ E  +     +     D +      ++  D  I L    +  L R+  R    E    
Sbjct: 144 YETECMNETEWTVYQDWHDWMNSQFGADLELDGIIYLRAIPEKCLNRIHCRGRDEEQGIP 203

Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV---ATNILNIVWE 210
           ++Y E+     +  + H   R  F  + +  P     +D    F+       +++  V E
Sbjct: 204 MEYLEKLHYKHESWLHHRTMRTDFAYL-QEIP--ILTLDVNEDFKDNKPKQESLIEKVKE 260

Query: 211 LV 212
            +
Sbjct: 261 FL 262


>gi|291279809|ref|YP_003496644.1| guanylate kinase [Deferribacter desulfuricans SSM1]
 gi|290754511|dbj|BAI80888.1| guanylate kinase [Deferribacter desulfuricans SSM1]
          Length = 203

 Score = 41.5 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 27/167 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M            GAGKT+  + L    + +  Y + + TREP            +    
Sbjct: 1   MYKTKLFVVSAPSGAGKTSLCNKLINKYKDRLKYSISYTTREPRIGEIDGQDYFFIDEKK 60

Query: 59  VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             E     E + +A    ++    + +I   L EG  ++ D  +D   A Q         
Sbjct: 61  FKEMIENNEFLEWAVVHGNYYGTSKKIIDKYLAEGYDVVLD--IDPQGARQ--------- 109

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
                    ++E  PD   I  +     +K ++ R   R +  ++  
Sbjct: 110 ---------IKEKYPDAVFIFIVAP--SMKELRTRLINRRTESMEKI 145


>gi|229587385|ref|YP_002860423.1| putative guanylate kinase [Clostridium botulinum Ba4 str. 657]
 gi|229260212|gb|ACQ51249.1| putative guanylate kinase [Clostridium botulinum Ba4 str. 657]
          Length = 197

 Score = 41.5 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 45/211 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVH---VTREP------GGTPAAEAARHVLLSCGVDEFGA 64
           G+GK+T    +   L+++ Y+      TR+P      G            +    D +  
Sbjct: 17  GSGKST----IAELLEKEGYNYIKSYTTRKPRYKGERGHIFLNSINDRNDIDILDDGYYL 72

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   I +A  + +H          +G          S Y  + +  +     +D ++   
Sbjct: 73  KENVIAYACYKDEHYYATKEQYRNKGT---------SIYIVEVKGVNELRSEIDDVEI-- 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                    + L     I   R+  RY              D      +R+   +   + 
Sbjct: 122 -------LVLYLKADEKIRRGRMIKRYIDVNGHS-------DSNYLMAQREA-QERIIHD 166

Query: 185 PDRC------HIVDSAHSFQSVATNILNIVW 209
            ++       +++D+      V  +I  I+ 
Sbjct: 167 KEKFQIIPCDYVIDANMQISEVLKSIKTIIE 197


>gi|260814394|ref|XP_002601900.1| hypothetical protein BRAFLDRAFT_124584 [Branchiostoma floridae]
 gi|229287203|gb|EEN57912.1| hypothetical protein BRAFLDRAFT_124584 [Branchiostoma floridae]
          Length = 255

 Score = 41.5 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 30/186 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEF- 62
           ++ EG    GK+T ISLL+   +  ++ +    ++R       +E    + LS       
Sbjct: 16  VAVEGNIAVGKSTFISLLEE--ESSDWAIVGEPLSRWQNVQCHSEKEEEITLSQKHGGNL 73

Query: 63  ------GAEAEAIVFAA------ARLD------HVENVIRPALMEGKILLCDRFLDSSYA 104
                      A  F +       R        H+E    P +   + +  DR+   +  
Sbjct: 74  LDMFYSDPRRWAFTFQSYVCLSRMRHQLKPAPGHLETAAEPVVFYERSVYSDRYWADAKV 133

Query: 105 YQGERDSSQHLF---LDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158
                   +  +    D    +  ++ E+  D  I L    ++ L+R++ R    E    
Sbjct: 134 RFLWVIGYRSGWNIYCDWHSTMMAAMGELKLDGIIYLRAEPEVCLERLKLRGRPEERPVS 193

Query: 159 LDYFER 164
           L+Y ++
Sbjct: 194 LEYLDQ 199


>gi|15827979|ref|NP_302242.1| adenylate kinase [Mycobacterium leprae TN]
 gi|221230456|ref|YP_002503872.1| adenylate kinase [Mycobacterium leprae Br4923]
 gi|13431601|sp|O33007|KAD_MYCLE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|254806998|sp|B8ZS96|KAD_MYCLB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|13093532|emb|CAC30786.1| probable adenylate kinase [Mycobacterium leprae]
 gi|219933563|emb|CAR71928.1| probable adenylate kinase [Mycobacterium leprae Br4923]
          Length = 181

 Score = 41.5 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 63/210 (30%), Gaps = 41/210 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK T    L   L         T         E  R  +      + G EA
Sbjct: 3   VVLLGPPGAGKGTQAQRLAEKL---GIPQIST--------GELFRRNI--EKDTKLGHEA 49

Query: 67  EAIVFAAAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  + A      D    ++   L +   +  D F+   Y    E+  + H  L+      
Sbjct: 50  KKYLDAGDLVPADLTNQLVDDRLNKSDTV--DGFILDGYPRSLEQAKALHEMLER----- 102

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLD--- 179
            +    D  +   +   + L+R++ R    ++    ++               I+ D   
Sbjct: 103 -RGTDIDAVLEFRVSQAVVLERLKGRGRADDTDDVVINRM------------NIYRDETA 149

Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +          +D+  +   V    L+ +
Sbjct: 150 SLLEYYSSELKTIDAIGTMDEVFARALHAL 179


>gi|257893355|ref|ZP_05673008.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408]
 gi|257829734|gb|EEV56341.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408]
          Length = 217

 Score = 41.5 bits (97), Expect = 0.092,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 80/233 (34%), Gaps = 40/233 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++   ++                      ++A    +    V       
Sbjct: 2   IVLAGTIGAGKSSLTEMMAEHF-----------------GSQAFYESIDDNEVLPLFYAN 44

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112
            E  A +     L+     I+ A+ +   +L DR  + DS           A + E    
Sbjct: 45  PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 103

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMI 169
             L  + ++E+  +  +  PD  + + +  D  L+R++ R    E    D         +
Sbjct: 104 DELLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLSFDPSLYDYYKEL 163

Query: 170 HEKRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           + +  Q + +       +   DR + V+ + + + V   I   + E+ Q  ++
Sbjct: 164 NRRYDQWYEEYKESPKIQIDGDRYNFVEDSQAKEEVLKMIEEKLAEIRQTELA 216


>gi|254167167|ref|ZP_04874020.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469]
 gi|197624023|gb|EDY36585.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469]
          Length = 316

 Score = 41.5 bits (97), Expect = 0.092,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 6/55 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----HVTREP--GGTPAAEAAR 51
            G  I F G  G GK+T I  +   L  +   V       R P  GG+   +  R
Sbjct: 46  KGRIICFTGPPGVGKSTLIDHVISILTERGKKVGVILVDPRSPYTGGSLLGDRIR 100


>gi|14591457|ref|NP_143537.1| signal recognition particle protein Srp54 [Pyrococcus horikoshii
           OT3]
 gi|3258124|dbj|BAA30807.1| 445aa long hypothetical signal recognition particle protein
           [Pyrococcus horikoshii OT3]
          Length = 445

 Score = 41.5 bits (97), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G++G+GKTT ++ L R+ Q++ Y V V       P A      LL     E 
Sbjct: 109 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEV 160


>gi|313893402|ref|ZP_07826974.1| guanylate kinase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442043|gb|EFR60463.1| guanylate kinase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 209

 Score = 41.5 bits (97), Expect = 0.093,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 15/118 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            GL I   G  GAGK T  + +++ +    Y V +T         E   +   S    E 
Sbjct: 4   RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAARVGEEEGVNYFFRSKEEFEI 63

Query: 63  GAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105
               +A +  A   D+     +  +   L +GK +L            +RF D+ + Y
Sbjct: 64  LLSEDAFLEYAKVYDNYYGTPKQHVMDLLDDGKSVLLEIDIQGAMQVKERFSDAVFIY 121


>gi|217077882|ref|YP_002335600.1| cytidylate kinase [Thermosipho africanus TCF52B]
 gi|226723093|sp|B7IE32|KCY_THEAB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|217037737|gb|ACJ76259.1| cmk cytidylate kinase [Thermosipho africanus TCF52B]
          Length = 222

 Score = 41.5 bits (97), Expect = 0.093,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 83/234 (35%), Gaps = 39/234 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  G+GKTT   +L   L               T A      + L     E  ++ 
Sbjct: 5   IAIDGPAGSGKTTVAKILADKL---GI------YYLDTGAMYRIIGLYLDKKGVENDSDI 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL----------LC-DRFLDSSYAYQGERDSSQHL 115
           E  +        +E +     + GK +          +C  ++   +   +      Q  
Sbjct: 56  ERELSTIK----LEFINGDFYINGKRVGDEIRTPYAGICASKYAKKAIVREFLTRIQQK- 110

Query: 116 FLDSLQEISVQEVMPDC--TIILDLPVDI-----GLKRVQNRYS--LRESACLDYFERKD 166
            +   + I V+    D    +I D  V I       +R + RY   L +   + Y E  +
Sbjct: 111 -ISKNENIVVEGR--DIGTVVIPDAEVKIFLVASAEERAKRRYKELLDKGVKVSYEEVLN 167

Query: 167 VMIHEKRRQIFLDIA-RNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSP 218
            +I   ++    +IA   QPD   ++DS   + + V   IL +V E  + ++  
Sbjct: 168 EIILRDKQDTEREIAPLRQPDDAVLIDSTKYTIEEVINKILEVVLEKCKLKLQK 221


>gi|126344211|ref|XP_001380179.1| PREDICTED: similar to Adenylate kinase 5 [Monodelphis domestica]
          Length = 209

 Score = 41.5 bits (97), Expect = 0.093,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 60/204 (29%), Gaps = 39/204 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G  G+GK T    L    ++  +      E      A  + R +LL              
Sbjct: 41  GGPGSGKGTQCEKLV---RKYGFAHVCVAELLRDELASGSPRSLLLGAAPP--------- 88

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             AA  LD ++  +      G               +G    +    L    +   +   
Sbjct: 89  --AADVLDLLKEALLARWAPG--------------LRGFLMEASPQELKQAHDFEPRVGP 132

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR-- 187
           P   + ++   D   +R+  R      A             +   +  L +A +  +   
Sbjct: 133 PQLVMCMECSADTMSRRLLQRDGESPEAVARRL--------QTYYRASLAVAAHYEETAP 184

Query: 188 CHIVDSAHSFQSVATNILNIVWEL 211
            H +++  S + V  ++ + V  +
Sbjct: 185 FHKINAEGSPEEVFLHVCSAVDAI 208


>gi|2370245|emb|CAA73635.1| thymidine kinase [Saimiriine herpesvirus 2]
 gi|30348524|emb|CAC84316.1| thymidine kinase [Saimiriine herpesvirus 2]
          Length = 527

 Score = 41.5 bits (97), Expect = 0.093,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 55/175 (31%), Gaps = 27/175 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58
            FI  EG  G GKTT +  +   L     +V    EP          + E    + L   
Sbjct: 210 FFIFLEGSIGVGKTTLLKSMNGIL--GGKNVLAFHEPIAYWTDVFSNSLEEVYKLTLPAK 267

Query: 59  VDEFGAEAEA----------IVFAAARLDHVENVIRPALMEGKILLCDRFLDS------S 102
           V      A+           ++      D + +     L     ++ DR   S       
Sbjct: 268 VGRTSNSAKLLACQLKFASPLLALKTATDRLSSHKNSLLSSDMWVMFDRHPLSATVVFPY 327

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
             +Q    S  HL        + Q    D  I+L+L     LKRV+ R    E +
Sbjct: 328 MHFQNGFLSFSHLIQLWSSFKASQG---DNIILLNLNSQENLKRVRKRNRKEEKS 379


>gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus]
          Length = 443

 Score = 41.5 bits (97), Expect = 0.093,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT ++ L R+ Q++ Y V V       P A    R VL    ++ FG   E  
Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQVLDRYHIEVFGNPQE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 +   +  +     +G  I++ D            R       ++ +++I
Sbjct: 165 ---KDAIKLAKEGVDYFKSKGVDIIIVD---------TAGRHKEDKALIEEMKQI 207


>gi|12230630|sp|O59307|SRP54_PYRHO RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
          Length = 443

 Score = 41.5 bits (97), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G++G+GKTT ++ L R+ Q++ Y V V       P A      LL     E 
Sbjct: 107 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEV 158


>gi|257456491|ref|ZP_05621687.1| cytidylate kinase/ribosomal protein S1 [Treponema vincentii ATCC
          35580]
 gi|257446151|gb|EEV21198.1| cytidylate kinase/ribosomal protein S1 [Treponema vincentii ATCC
          35580]
          Length = 801

 Score = 41.5 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          + I+ +G  G+GK+T   +L   L         T    G+     A  VL S G DE GA
Sbjct: 1  MIIAIDGPAGSGKSTVAKMLAADL-------GFTFMNTGSFYRAMALAVLRSLGGDESGA 53

Query: 65 EAE 67
           AE
Sbjct: 54 GAE 56


>gi|224049009|ref|XP_002188737.1| PREDICTED: XPA binding protein 1, GTPase [Taeniopygia guttata]
          Length = 371

 Score = 41.5 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 21  GMAGSGKTTFVQRLAAHLHGQRCPPYVINLDPAVHSLPFPANIDIRDTVKYKEVMKQYGL 80

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I       K ++ D
Sbjct: 81  GPNGGIVTSLNLFATRFDQVMKFIEKRQNASKYVIID 117


>gi|217076198|ref|YP_002333914.1| ffh signal recognition particle protein [Thermosipho africanus
           TCF52B]
 gi|217036051|gb|ACJ74573.1| ffh signal recognition particle protein [Thermosipho africanus
           TCF52B]
          Length = 435

 Score = 41.5 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 22/125 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L   L++K     +       PAA     ++        G + +  V
Sbjct: 105 GLQGSGKTTSAAKLANLLKKKGKKTFLVAADTYRPAA--IDQLI------TLGKKIDVPV 156

Query: 71  FAAARLD---HVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           F   R D    V   I+     G  +++ D            R       ++ L+EI   
Sbjct: 157 FYGDRKDPVKIVREAIKEVKDSGYNVVIFD---------TAGRLHVDDEMMNELEEI-KD 206

Query: 127 EVMPD 131
            + PD
Sbjct: 207 ILNPD 211


>gi|115391067|ref|XP_001213038.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114193962|gb|EAU35662.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 217

 Score = 41.2 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 70/214 (32%), Gaps = 43/214 (20%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTRE----PGGTPAAEAARHVLLSCGVD 60
              G  G GK+T    L   L     +  D H          G P  +A R        D
Sbjct: 35  VVTGPAGCGKSTVGKGLANELHYPFLEGDDFHSASNKQKMGSGIPLTDADR-------WD 87

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  EA    A R              G ++ C      S   Q  RD  +   + + 
Sbjct: 88  WLIALREA----ATRALSPSQANNFHPPAGVVVAC------SALKQKYRDVMR---IATY 134

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
              SVQ       + L L  ++ L+RV  R +            K VM+  + R   L+ 
Sbjct: 135 NSPSVQIHF----VYLKLDEEVLLRRVAQRQAHY---------MKSVMVQSQLRD--LEE 179

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            + + D    +D+      V T +L +V E + +
Sbjct: 180 PKGEWD-ALTIDANAPPAQVQTEVLKLVKEKMAE 212


>gi|67920602|ref|ZP_00514122.1| Guanylate kinase [Crocosphaera watsonii WH 8501]
 gi|67858086|gb|EAM53325.1| Guanylate kinase [Crocosphaera watsonii WH 8501]
          Length = 184

 Score = 41.2 bits (96), Expect = 0.095,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 59/186 (31%), Gaps = 28/186 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M SG  I   G  G GK T +  L          V   TR P          + L     
Sbjct: 1   MASGKLIVLTGPSGVGKGTLVRSLLVRHPELYLSVSATTRSPREGEIEGKDYYFLNKSAF 60

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +    + + +    +A          +   + +G I+L                    L 
Sbjct: 61  ETMIEQNQLLEWAEYAGNYYGTPRTKVEEKIDQGLIVL--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           ++ +   S+++  PD   I  LP   +    R+++R +  E A L   ER    +  K  
Sbjct: 101 IEVVGANSIKDSFPDALRIFILPPSLEELEHRLRSRKTDTEEAILRRLERAKEEL--KVS 158

Query: 175 QIFLDI 180
           + F   
Sbjct: 159 EEFDQR 164


>gi|34581390|ref|ZP_00142870.1| adenylate kinase [Rickettsia sibirica 246]
 gi|28262775|gb|EAA26279.1| adenylate kinase [Rickettsia sibirica 246]
          Length = 212

 Score = 41.2 bits (96), Expect = 0.096,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +   +               +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKIDLLHI-----------AIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  +L  +    + Y   G   + +       +   
Sbjct: 45  EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KR+  RYS +    +                      DY 
Sbjct: 101 KEKIK---IIYFDVSDELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +  +  + +KR +++      +          +IV+ + + Q +  +I  I+ 
Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210


>gi|302392206|ref|YP_003828026.1| guanylate kinase [Acetohalobium arabaticum DSM 5501]
 gi|302204283|gb|ADL12961.1| guanylate kinase [Acetohalobium arabaticum DSM 5501]
          Length = 192

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 61/218 (27%), Gaps = 42/218 (19%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I   G    GK T I+ L    Q  +Y V   TR+P            +      E 
Sbjct: 7   GKLIILSGPSAVGKGTVITALMDEYQDISYSVSVTTRQPRVDEEDGVDYFFVSETEFKEM 66

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               E I +A    ++    +  +   L  G+ ++                         
Sbjct: 67  IDNDEFIEWAKVHENYYGTPKKCVEDTLASGQDVIL---------------EIDIQGAAQ 111

Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +++   Q        I   P   +    R+Q R +  + A     E              
Sbjct: 112 VKKSYQQG-----VFIFLAPPSLEELEARIQKRGTDSQKAIEVRMENATEE--------- 157

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           ++ A N      +V+       V   +  +   ++ +R
Sbjct: 158 MERAENYD--YIVVN-----DEVEEAVEKVKSVIIAER 188


>gi|282850131|ref|ZP_06259510.1| guanylate kinase [Veillonella parvula ATCC 17745]
 gi|294791785|ref|ZP_06756933.1| guanylate kinase [Veillonella sp. 6_1_27]
 gi|294793646|ref|ZP_06758783.1| guanylate kinase [Veillonella sp. 3_1_44]
 gi|282579624|gb|EFB85028.1| guanylate kinase [Veillonella parvula ATCC 17745]
 gi|294455216|gb|EFG23588.1| guanylate kinase [Veillonella sp. 3_1_44]
 gi|294457015|gb|EFG25377.1| guanylate kinase [Veillonella sp. 6_1_27]
          Length = 209

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 17/119 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I   G  GAGK T  + +++ +    Y V   TR P      E   +   S    E
Sbjct: 4   RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAPRVGE-KEGINYFFRSKEEFE 62

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105
                +A +  A   D+     +  +   L +GK +L            +RF D+ + Y
Sbjct: 63  SLLSEDAFLEYAKVYDNYYGTPKQHVMDLLDDGKSVLLEIDIQGAMQVKERFSDAVFIY 121


>gi|229442335|gb|AAI72913.1| dynein, cytoplasmic 2, heavy chain 1 [synthetic construct]
          Length = 2167

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK+T   +L+  L +    V   T  P   P  +   H+       E+   
Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069


>gi|229060224|ref|ZP_04197593.1| uridine kinase [Bacillus cereus AH603]
 gi|228719106|gb|EEL70718.1| uridine kinase [Bacillus cereus AH603]
          Length = 186

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 21/90 (23%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIA-- 181
           D TI +D P+DI + R   R         D+ E     IH          R+ +L+    
Sbjct: 101 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 151

Query: 182 -RNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            ++  D   ++D + S   +   I+  +  
Sbjct: 152 VKSNSD--IVLDGSLSISEIIDQIMEELNR 179


>gi|15791234|ref|NP_281058.1| signal recognition particle receptor [Halobacterium sp. NRC-1]
 gi|169236990|ref|YP_001690190.1| signal recognition particle receptor SRalpha [Halobacterium
           salinarum R1]
 gi|10581862|gb|AAG20538.1| signal recognition particle receptor [Halobacterium sp. NRC-1]
 gi|167728056|emb|CAP14844.1| signal recognition particle receptor SRalpha [Halobacterium
           salinarum R1]
          Length = 373

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 18/156 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ L R+L+ + +   +    G T  A A + +      +  G + 
Sbjct: 177 IVFTGVNGVGKTTTIAKLARYLESEGFSSVLA--NGDTYRAGANQQI--EEHAEALGVKC 232

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       V + +  A      ++L D            R  +    +  L+++  
Sbjct: 233 ITHEQGGDPTAVVYDAVEYADANDVDVVLGD---------TAGRLHTSDDLMSQLEKLD- 282

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160
           + V PD T+   +   +  +   NR     E++ +D
Sbjct: 283 RVVDPDVTVF--VDEAVAGQDAVNRAREFDEASAVD 316


>gi|54024423|ref|YP_118665.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Nocardia farcinica IFM 10152]
 gi|54015931|dbj|BAD57301.1| putative sulfate adenylyltransferase subunit 1 [Nocardia farcinica
           IFM 10152]
          Length = 612

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 17/72 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L+R L  +                      LL       G  A+   
Sbjct: 447 GLSGSGKSTVAVELERRLVAEGRPAF-----------------LLDGDNLRHGLNADLSF 489

Query: 71  FAAARLDHVENV 82
            AA R ++V  V
Sbjct: 490 SAADRAENVRRV 501


>gi|316970965|gb|EFV54816.1| adenylate kinase isoenzyme 1 [Trichinella spiralis]
          Length = 199

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 64/209 (30%), Gaps = 43/209 (20%)

Query: 14  GAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G+GK T  + +        L     D+       G+      + ++ S   +    E   
Sbjct: 21  GSGKGTQCAKIVDKYNLTHLSSG--DLLRAEVNSGSERGGQLKDIMASG--ELVALEIVL 76

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
            +   A L+ ++   R  L++G                  RD  Q    ++       E+
Sbjct: 77  DLVKEAMLEAIKKGSRGFLIDGY----------------PRDVRQGEIFEA-------EI 113

Query: 129 MP-DCTIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEK---RRQIFLDIAR 182
           MP +  I  D+  +  ++R+  R         +     ++    H++       +     
Sbjct: 114 MPCELVIFFDVSDETMIQRLLGRGQTSGRVDDNRETITKRLDTFHKQTQPVIDYY----- 168

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              ++   + +      +   +   + +L
Sbjct: 169 KAKNKLVQIHAEGKVDDIFAEVDKALQKL 197


>gi|116201719|ref|XP_001226671.1| hypothetical protein CHGG_08744 [Chaetomium globosum CBS 148.51]
 gi|88177262|gb|EAQ84730.1| hypothetical protein CHGG_08744 [Chaetomium globosum CBS 148.51]
          Length = 1112

 Score = 41.2 bits (96), Expect = 0.097,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           +G   +  G  G+GK+T + LL+R+ +       +     R    T      R + L   
Sbjct: 372 AGKVTAIAGPSGSGKSTIVGLLERWYEIESPDSGHKSLSWRNGSITIGGRPLREIDLKWW 431

Query: 59  VDEFGA-EAEAIVFA 72
            ++ G  + E  +F 
Sbjct: 432 RNQIGLVQQEPCLFN 446


>gi|294085099|ref|YP_003551859.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664674|gb|ADE39775.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 627

 Score = 41.2 bits (96), Expect = 0.098,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +    I F G+ G+GK+T  + L+  L  +                   R  +L      
Sbjct: 457 HKSKVIWFTGLSGSGKSTIANALEVELHSRG-----------------IRTYILDGDNIR 499

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +     A R++++     V +  +  G +++ 
Sbjct: 500 HGLNNDLGFTDADRVENIRRISEVAKLMVDAGIVVIT 536


>gi|18314019|ref|NP_560686.1| signal recognition particle [Pyrobaculum aerophilum str. IM2]
 gi|28380154|sp|Q8ZT95|SRP54_PYRAE RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|18161596|gb|AAL64868.1| signal recognition particle (srp54 family), putative [Pyrobaculum
           aerophilum str. IM2]
          Length = 433

 Score = 41.2 bits (96), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53
           G+EG+GKTT  + L ++L ++ Y V +       PAA +  R +
Sbjct: 106 GVEGSGKTTTAAKLAKYLAKRGYKVGLVETDTIRPAAFDQLRQL 149


>gi|308187361|ref|YP_003931492.1| adenylate kinase [Pantoea vagans C9-1]
 gi|308057871|gb|ADO10043.1| Putative adenylate kinase [Pantoea vagans C9-1]
          Length = 167

 Score = 41.2 bits (96), Expect = 0.099,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 36/151 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62
           +   F G+ G GK+T   LL   L+     V            +     L +      + 
Sbjct: 1   MLYIFSGLPGCGKSTIAKLLSEKLKAVYLRV------------DTIEQALRNGSAASGDI 48

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G E   I++  AR           L  G  ++ D              +  +L  DS ++
Sbjct: 49  GPEGYFILYELAR---------DNLKLGLPVVTD------------SVNDLNLVRDSFRD 87

Query: 123 ISVQEVMPDCTI-ILDLPVDIGLKRVQNRYS 152
           I++   +P   I IL    +    RV++R S
Sbjct: 88  IAISSCVPFLEIEILCSDPEQHRARVESRIS 118


>gi|297625809|ref|YP_003687572.1| Adenylate kinase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921574|emb|CBL56128.1| Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 191

 Score = 41.2 bits (96), Expect = 0.099,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 67/217 (30%), Gaps = 45/217 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTRE------PGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T    +             T +        GTP  +    ++ +     F  
Sbjct: 7   GAPGAGKGTQAVGIATHY---GVPAISTGDMFRDNVKNGTPLGKQVDAIMKAGD---FVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123
           +       A RLD      +P    G   L D F  +   +Q          +D+L + +
Sbjct: 61  DELTEQIVADRLD------QPDAQGGF--LLDGFPRTM--HQ----------VDALDDYL 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
                  D  I LD+  +  + R+  R  L   A     + ++ + H    +++      
Sbjct: 101 DKHGHSLDAVISLDVDPEDLIARLLKRAELEGRAD----DNEETIRHRM--EVYTSSTAP 154

Query: 180 IARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214
           +      R     VD   +   V   I   V   V +
Sbjct: 155 LLDAYKSRGLLVAVDGNGTVDEVGARIAAAVDAKVGR 191


>gi|183601510|ref|ZP_02962880.1| hypothetical protein BIFLAC_02612 [Bifidobacterium animalis
          subsp. lactis HN019]
 gi|183219116|gb|EDT89757.1| hypothetical protein BIFLAC_02612 [Bifidobacterium animalis
          subsp. lactis HN019]
          Length = 213

 Score = 41.2 bits (96), Expect = 0.099,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          M +   I  EG+  +GK+T  +++   L+ +  +V    E
Sbjct: 1  MRT-RLIIVEGLPDSGKSTTAAMVAAELEARGRNVVCVEE 39


>gi|169775499|ref|XP_001822217.1| uridylate kinase [Aspergillus oryzae RIB40]
 gi|238495841|ref|XP_002379156.1| uridylate kinase Ura6 [Aspergillus flavus NRRL3357]
 gi|83770080|dbj|BAE60215.1| unnamed protein product [Aspergillus oryzae]
 gi|220694036|gb|EED50380.1| uridylate kinase Ura6 [Aspergillus flavus NRRL3357]
          Length = 215

 Score = 41.2 bits (96), Expect = 0.099,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 65/212 (30%), Gaps = 45/212 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T  + L R      L   +       RE  G+   E  +  +    +     
Sbjct: 23  GGPGSGKGTQSANLVRDYGFVHLSAGDLLRAEQIRE--GSQYGELIKTYIREGKIVPM-- 78

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E    + + A  D ++N    +  EGK     RFL       G                 
Sbjct: 79  EITVALLSNAMADALKNG--ASAGEGKKA---RFLVD-----GFPRKLDQAI------FF 122

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI--- 180
              V P + T+ LD P ++  KR+  R              +D    E  R+ F      
Sbjct: 123 EDTVCPSELTLFLDCPEEVMEKRLLKRGETSG---------RDDDNAESIRKRFRTFIDT 173

Query: 181 ------ARNQPDRCHIVDSAHSFQSVATNILN 206
                 A  + ++   V +  S + V   I  
Sbjct: 174 SMPVVDAFKKQNKVVSVPATGSVEEVYALIQE 205


>gi|56418714|ref|YP_146032.1| uridine kinase [Geobacillus kaustophilus HTA426]
 gi|56378556|dbj|BAD74464.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 201

 Score = 41.2 bits (96), Expect = 0.099,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 15/159 (9%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           GI+G   +GKTT  + L + L+ +   V V          E A+      G +E+    E
Sbjct: 26  GIDGLSRSGKTTLANQLSQTLREQGISVCVFHM--DDHIVERAKRY--HTGNEEW---FE 78

Query: 68  AIVFAAARLDHVENVIRPALMEGKILL--CDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                         + R      ++ L   D   D+          S  + ++ +  +  
Sbjct: 79  YYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVF-LQR 137

Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +E  P  D  + LD P +I   R  ++        ++ +
Sbjct: 138 KEWRPFFDFVVYLDCPREIRFARENDQVKQNIQKFINRY 176


>gi|134096275|ref|YP_001101350.1| bifunctional 3-dehydroquinate synthase/shikimate kinase
           [Herminiimonas arsenicoxydans]
 gi|133740178|emb|CAL63229.1| bifunctional protein [Includes: 3-dehydroquinate synthase ;
           shikimate kinase] [Herminiimonas arsenicoxydans]
          Length = 554

 Score = 41.2 bits (96), Expect = 0.100,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 61/201 (30%), Gaps = 52/201 (25%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G+ GAGKTT    L + L ++  D                        ++
Sbjct: 1   MGGNIFLV--GLMGAGKTTVGRALAKRLNKQFIDS--------------------DHEIE 38

Query: 61  EFGAEAEAIVF----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                A  ++F     A+       VIR    +  I+L            G         
Sbjct: 39  ARTGAAIPLIFEIEGEASFRQREAEVIRDLTAQQDIVLAT----------GGGAVLNAEN 88

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ- 175
              L+            I L   V+  L+R  +  +       D   RK +    + R+ 
Sbjct: 89  RAYLKSRGT-------VIYLRASVNNLLQRTSHDKNRPLLQTGDP--RKTLEELSRIREP 139

Query: 176 IFLDIARNQPDRCHIVDSAHS 196
           ++ +IA        ++D+   
Sbjct: 140 LYNEIAD------IVIDTGRP 154


>gi|308270371|emb|CBX26983.1| Cytidylate kinase [uncultured Desulfobacterium sp.]
          Length = 227

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 6/41 (14%)

Query: 1  MNSG---LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          MN     L I+ +G  GAGKTT   +L   L    Y    T
Sbjct: 1  MNKNTKLLLITIDGPAGAGKTTVSKILAERL---GYKYIDT 38


>gi|257415688|ref|ZP_05592682.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|257157516|gb|EEU87476.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
          Length = 177

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L R L+ +              + +  R  +L    DE G 
Sbjct: 17  KLIILRGNSGSGKTTIAKALHRCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    ++ L E +
Sbjct: 66  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEMNHLFEGN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140


>gi|256085939|ref|XP_002579166.1| hypothetical protein [Schistosoma mansoni]
 gi|238664580|emb|CAZ35405.1| expressed protein [Schistosoma mansoni]
          Length = 4140

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T +++L+  L +    +      P         R  LL     +    
Sbjct: 1842 VVLVGPCGSGKSTVLNILRLALNKMGISIRSHIFNP-----KSMLRVQLLGQIEADTREW 1896

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  +AR      V++  + +   ++ D                   +++SL  +
Sbjct: 1897 TDGVLTHSARC-----VVKECIDQKCWIISD-------------GDIDPEWIESLNSV 1936


>gi|229258558|gb|ACQ45584.1| cell division protein FtsY [Ectenagena extenta gill symbiont]
          Length = 194

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L ++ Q +   V +    G T  A A   + +    +     A+ + 
Sbjct: 45  GVNGAGKTTLIGKLAKYFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVVAKTL- 101

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +  + A  +   ILL D
Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILLAD 127


>gi|229191154|ref|ZP_04318143.1| Uridine kinase [Bacillus cereus ATCC 10876]
 gi|228592304|gb|EEK50134.1| Uridine kinase [Bacillus cereus ATCC 10876]
          Length = 223

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 21/174 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV--------HVTREPGGTPAAEAARHVLLSCGVDEF 62
           GI  +GKTT  + L   ++++   V        H  R    T   E+AR        D  
Sbjct: 29  GITASGKTTFANELAEKIKKRGLPVTRASIDDFHNPRVIRYTKGKESARGYY-EDAHDYT 87

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +   ++      +     I   L+    +      +   A Q         FL  L++
Sbjct: 88  AFKERLLMPLGPNGNLQYETISHNLITDMPV----HNEPLLATQNMILIVDGTFL--LKK 141

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                   D  I +D   +I  KR   R    E+     +E  + M   +    
Sbjct: 142 DVTHLF--DYKIFVDTDFEIARKRGAKR----ETEAFGSYEEAEKMFLNRYHAA 189


>gi|154246424|ref|YP_001417382.1| hypothetical protein Xaut_2483 [Xanthobacter autotrophicus Py2]
 gi|154160509|gb|ABS67725.1| protein of unknown function DUF344 [Xanthobacter autotrophicus Py2]
          Length = 496

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
            SGL I+FEG + AGK++ I  L+R L  + + VH    P     A
Sbjct: 298 RSGLVIAFEGSDAAGKSSTIMRLRRALDPRRFRVHPIAAPTDEERA 343


>gi|322822754|gb|EFZ28723.1| dynein heavy chain, putative [Trypanosoma cruzi]
          Length = 3061

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+R LQR    V      P   P     R  LL    ++    
Sbjct: 1944 VVLVGPGGSGKSTLLRVLRRALQRLGVSVPLYVMNPKAMP-----RTQLLGHMDNDTREW 1998

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++  AA     + V++        ++CD                   +++SL  +
Sbjct: 1999 FDGVLTEAA-----KKVVKEENDVRSWIVCD-------------GDIDPEWIESLNSV 2038


>gi|109947389|ref|YP_664617.1| adenylate kinase [Helicobacter acinonychis str. Sheeba]
 gi|109714610|emb|CAJ99618.1| adenylate kinase [Helicobacter acinonychis str. Sheeba]
          Length = 191

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +           T +     +A+     LL   ++
Sbjct: 1   MKRLFLII--GAPGSGKTTDAELIAKN-NSATIAHFSTGDLLRAESAKKTDRGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   E  I+L D +  S      E+ ++    L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSEKGIILIDGYPRS-----VEQMNALDKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++  K  + R   R     D     +++ H +   +FL
Sbjct: 105 AQNEVVLKSV---------IEVEVSEKTAKERVLGRSRGADD----NEIVFHNRMH-VFL 150

Query: 179 D--IARNQ----PDRCHIVDSAHSFQSVATNILNIVWEL 211
           D  IA             ++   S + +   +   +   
Sbjct: 151 DPLIAIQNFYKAKKVYKTINGERSIEEIVHEMQEYILSF 189


>gi|296109588|ref|YP_003616537.1| Adenylate kinase [Methanocaldococcus infernus ME]
 gi|295434402|gb|ADG13573.1| Adenylate kinase [Methanocaldococcus infernus ME]
          Length = 169

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 60/206 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GKTT   +L   L    + V            +    V  +    E+  E 
Sbjct: 3   IAITGTPGVGKTTVSKILGERL---GFKVI-----------DITDFVKKNKLYKEYVEEM 48

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           ++ +            ++ AL +   ++ D                    +  L ++   
Sbjct: 49  DSFLIDF-------EKLKKALEKEDNVIFDGH------------------ISHLLDV--- 80

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-P 185
               D TI+L     I  KR++ R    +             I E  +   LD+   +  
Sbjct: 81  ----DYTIVLRCDPKIIEKRLKERGYSEKK------------ILENVQAEILDVCLCESK 124

Query: 186 DRCHIVDSA-HSFQSVATNILNIVWE 210
            + + +D+     + +   I++ + E
Sbjct: 125 GKVYEIDTTNKKPEEIVEEIISAIKE 150


>gi|241889553|ref|ZP_04776851.1| bacitracin export ATP-binding protein BceA [Gemella haemolysans
           ATCC 10379]
 gi|241863175|gb|EER67559.1| bacitracin export ATP-binding protein BceA [Gemella haemolysans
           ATCC 10379]
          Length = 247

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G FI   G  G+GK+T + ++   L+  +  V +  +   +   E      L      F
Sbjct: 26  KGEFIVIMGKSGSGKSTLLKIIAGLLKLDSGKVVIDNKNITSLNNEKLAEYRLKNIGIVF 85

Query: 63  GAEAEAIVFAAARLDHVENVIRPA 86
                  +F A      EN+I PA
Sbjct: 86  QDYQLLDIFTA-----YENIIFPA 104


>gi|119947283|ref|YP_944963.1| ABC phosphonate transporter ATP-binding protein [Psychromonas
           ingrahamii 37]
 gi|119865887|gb|ABM05364.1| ABC phosphonate transporter ATP-binding protein [Psychromonas
           ingrahamii 37]
          Length = 245

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G   +  G  GAGK+T +  + R +L      +  T +   T  A+A  H +L    DE 
Sbjct: 38  GRLTALTGPTGAGKSTVLKGIYRTYLPTSGRIIFTTEQGQQTDLAKADEHQILELRKDEI 97

Query: 63  GAEAEAIVFAAARLDHVENVI-RPALMEG 90
           G   +  +    R    E+V+  P + +G
Sbjct: 98  GFVTQ-FLHTLPR-QSTEDVVAMPLIKKG 124


>gi|305672712|ref|YP_003864383.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|305410955|gb|ADM36073.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 217

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    +   +  E    P  E   H       + +    
Sbjct: 12  ITVAGTVGVGKSTLTKALAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119
           +   F A R        +     G   + DR  + D+       A +G      +    S
Sbjct: 63  QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKIDYKTYTS 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175
           L E   ++     PD  I L+  ++  L R++ R    E      Y+E     +H +   
Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEERGREMELQTSRSYWE----EMHTRYEN 173

Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               F    + + + +   +++   S +++   I +++ E
Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDESSIENIVDQIASVIHE 213


>gi|156974500|ref|YP_001445407.1| hypothetical protein VIBHAR_02217 [Vibrio harveyi ATCC BAA-1116]
 gi|156526094|gb|ABU71180.1| hypothetical protein VIBHAR_02217 [Vibrio harveyi ATCC BAA-1116]
          Length = 129

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M +   I   G+ G+GKTT    L + L+ K+++  +  E 
Sbjct: 1  MPNAKLILIRGLPGSGKTTLAKKLSKQLKAKHFEADMYFEN 41


>gi|154331347|ref|XP_001561492.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134058809|emb|CAM36479.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1362

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 52/209 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GI   GKTT    L   L+              +T + G     E  R V      D   
Sbjct: 307 GIPAVGKTTLGRELVNSLKTDGMGWAFFSGADFLTEQQGKRSVWETTRDVF-----DALS 361

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  + ++       H    I+       +++             +++      +  L   
Sbjct: 362 SRLDELL----ERQHQARNIK------GLVI-------------DKNCKGIEDIYYLNA- 397

Query: 124 SVQEVMPDCTIIL--DLPVD--IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                     ++L  D+P    +GL+   +   ++     DY  R+ +  H       + 
Sbjct: 398 ----------LLLSKDIPFVGIVGLECADDDVLVKRMGGDDYL-REKLKFHRVIHARIVS 446

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A++       VD+  S   V   +  +V
Sbjct: 447 LAKSA-GMYRYVDATKSKDEVIQLLRTMV 474


>gi|303228530|ref|ZP_07315358.1| guanylate kinase [Veillonella atypica ACS-134-V-Col7a]
 gi|303232137|ref|ZP_07318840.1| guanylate kinase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513243|gb|EFL55282.1| guanylate kinase [Veillonella atypica ACS-049-V-Sch6]
 gi|302516777|gb|EFL58691.1| guanylate kinase [Veillonella atypica ACS-134-V-Col7a]
          Length = 209

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 17/119 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I   G  GAGK T  S ++  +    Y V   TREP      E   +   +    E
Sbjct: 4   RGLLIVISGPSGAGKGTICSNIRGEMPNLVYSVSMTTREPRVGE-KEGINYFFRTKEEFE 62

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105
                +A +  A   D+     +  +   L EGK +L            +RF D+ + Y
Sbjct: 63  SLLSEDAFLEYAKVYDNYYGTPKQHVMNLLDEGKSVLLEIDIQGAMQVKERFSDAVFIY 121


>gi|195455298|ref|XP_002074656.1| GK23049 [Drosophila willistoni]
 gi|194170741|gb|EDW85642.1| GK23049 [Drosophila willistoni]
          Length = 673

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 54 MKTGDLIAILGGSGAGKTTLLAAISQRLR 82


>gi|167919768|ref|ZP_02506859.1| adenylylsulfate kinase [Burkholderia pseudomallei BCC215]
          Length = 206

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRTGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|11499583|ref|NP_070825.1| hypothetical protein AF2001 [Archaeoglobus fulgidus DSM 4304]
 gi|3123135|sp|O28278|KAD6_ARCFU RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
           transphosphorylase
 gi|2648537|gb|AAB89254.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 178

 Score = 41.2 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 60/206 (29%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G GK++    +   L+ + Y V    E             ++     E   
Sbjct: 1   MLIALTGTPGTGKSS----VAERLRERGYKVATVVELAEKHGC------IIDEEDGEIVI 50

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           + E++   AAR+D  E ++   L                                     
Sbjct: 51  DVESL---AARID-FEGIVEGHLS------------------------------------ 70

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              + PD  I+L     +  +R++ R    E   L+  E + + +        L  A   
Sbjct: 71  -HLLKPDVAIVLRCNPAVLRERLKGRNWSEEK-LLENLEAEMLDVI-------LVEALEH 121

Query: 185 PDRCHIVDSAH-SFQSVATNILNIVW 209
               + +D+   S + V   +  I+ 
Sbjct: 122 ASEVYEIDTTEMSLEEVIEAVEAIIR 147


>gi|262038193|ref|ZP_06011587.1| guanylate kinase [Leptotrichia goodfellowii F0264]
 gi|261747774|gb|EEY35219.1| guanylate kinase [Leptotrichia goodfellowii F0264]
          Length = 181

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 23/175 (13%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I   G  G+GK+T   ++K  L         TR+P          + L        
Sbjct: 2   KGKLIIVSGPSGSGKSTVTKIVKDRLNIPLSISATTRKPREGEVEGIDYYFLSEDEFKRK 61

Query: 63  GAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +  E   +A    ++   ++  +   L +G  ++ +         QG   +        
Sbjct: 62  ISNDEFYEYANVHGNYYGTLKKTVEENLEKGLNVILE------IDVQGALIAKDKKKDAV 115

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIHEK 172
           L     ++              I  +R++ R +  E       E   K++    K
Sbjct: 116 LVFFKTKDTK------------ILEERLRGRKTDSEEVIKKRLENALKELEFENK 158


>gi|238026304|ref|YP_002910535.1| Deoxynucleoside kinase family protein [Burkholderia glumae BGR1]
 gi|237875498|gb|ACR27831.1| Deoxynucleoside kinase family protein [Burkholderia glumae BGR1]
          Length = 227

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 48/169 (28%), Gaps = 31/169 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKT+  +LL         D    R P   P  E               A
Sbjct: 18  RYLAIEGPIGVGKTSLATLLAERW---GMDTLFER-PQDNPFLE---RFYREGARYALPA 70

Query: 65  EAEAIVFAAARLDHVENVIRPAL-----------MEGKILLCDRFLDSSYAYQGERDSSQ 113
           +   + FA  R      +                 + +I          +A     D   
Sbjct: 71  Q---LAFALQRARQTGGIAAAQAAGAALVADFMPQKSEI----------FARLTLADDEW 117

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L+    + I      PD  + L    ++   R+Q R    E    D +
Sbjct: 118 QLYRTLAERIDAPAPAPDLVVYLQASPEVLYARIQKRGIAAELQIGDAY 166


>gi|313125653|ref|YP_004035923.1| cytidylate kinase, putative [Halogeometricum borinquense DSM 11551]
 gi|312292018|gb|ADQ66478.1| cytidylate kinase, putative [Halogeometricum borinquense DSM 11551]
          Length = 204

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 55/169 (32%), Gaps = 42/169 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+  G  G G TT    L R L+            G     +  R +           
Sbjct: 16  LFITVSGPPGCGATTLCKGLSRSLEC-----------GYVSGGDIFREL----------- 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAYQGERDSSQHLFLDSLQ 121
                  A  R   +  +I  A    +I   DR LD    + A Q    +   +    L 
Sbjct: 54  -------AEERGMSLSQLIAKADESDEI---DRALDRRLRTVAEQWGASNKPFVLESRLA 103

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSL------RESACLDYFER 164
              +     D  I LD P ++ ++R ++R  L      RE +    +E 
Sbjct: 104 GW-LAGNRADLRIWLDAPEEVRVERTRDREELEAEMRVREVSEAGRYES 151


>gi|194755092|ref|XP_001959826.1| GF11841 [Drosophila ananassae]
 gi|190621124|gb|EDV36648.1| GF11841 [Drosophila ananassae]
          Length = 673

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 58 MKTGDLIAILGGSGAGKTTLLAAISQRLR 86


>gi|47226455|emb|CAG08471.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 259

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 38/197 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR-----------KNYDVHVTREPGGTP--AAEAARHV 53
           +S EG    GK+T   LL+                +N     +++P G P   +   + +
Sbjct: 41  VSIEGNIAVGKSTFGRLLQSACPDWEVMTEPVSMWQNIGTGSSKDPHGPPQTVSNLLQMM 100

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-------KILLCDRFLDSSYAYQ 106
                   +  +  A + +  +             EG       + +  DR++ +   ++
Sbjct: 101 YQDPQRWSYTFQTYACM-SRVKTQLQPPPAHLLASEGSPVQVYERSVYSDRYIFALNMFE 159

Query: 107 GERDSSQHLFL--DSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
                     +  D            + ++ +     I L  P +  L+R++ R    E 
Sbjct: 160 LGCIGPTEWAIYQDWHSLLVEEFGHRLELEGI-----IYLRAPPETCLQRLRQRGRAEEE 214

Query: 157 A-CLDYFERKDVMIHEK 172
              LDY E   +  HE+
Sbjct: 215 GVKLDYLETLHLQ-HER 230


>gi|327440535|dbj|BAK16900.1| ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase
          component [Solibacillus silvestris StLB046]
          Length = 261

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHV 53
          G FI   G  G+GK+T + +L R L++ +  V    +E       + AR +
Sbjct: 27 GKFIGIIGPNGSGKSTMLKILYRHLKQSSGKVTLHEQEVWDISPKKLARQM 77


>gi|294496578|ref|YP_003543071.1| ATPase, PilT family [Methanohalophilus mahii DSM 5219]
 gi|292667577|gb|ADE37426.1| ATPase, PilT family [Methanohalophilus mahii DSM 5219]
          Length = 608

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
           M  G+ IS  G  GAGK+T  + L  +L  + Y V     P  
Sbjct: 264 MQRGVLIS--GPPGAGKSTFAAGLAIYLHERGYVVKTMESPRD 304


>gi|257885794|ref|ZP_05665447.1| deoxynucleoside kinase [Enterococcus faecium 1,231,501]
 gi|257821650|gb|EEV48780.1| deoxynucleoside kinase [Enterococcus faecium 1,231,501]
          Length = 219

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 46/236 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++   ++      +                 A    +    V       
Sbjct: 4   IVLAGTIGAGKSSLTEMMAEHFDSQ-----------------AFYESIDDNEVLPLFYAN 46

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112
            E  A +     L+     I+ A+ +   +L DR  + DS           A + E    
Sbjct: 47  PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 105

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +
Sbjct: 106 DELLKNMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYY 162

Query: 171 EKRRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
           ++  + +        +   I +D           + + V   I   + E+ Q +V+
Sbjct: 163 KELNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVA 218


>gi|154496746|ref|ZP_02035442.1| hypothetical protein BACCAP_01039 [Bacteroides capillosus ATCC
           29799]
 gi|150273998|gb|EDN01098.1| hypothetical protein BACCAP_01039 [Bacteroides capillosus ATCC
           29799]
          Length = 205

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 75/220 (34%), Gaps = 24/220 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+ + I   G  G+GKTT    L          V+        P         L+    
Sbjct: 1   MNT-MVIGIAGGTGSGKTTLTRHLVESFGGNISVVYHDNYYKAHPNMTYEERAALNYDHP 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +           A   D +   +R  L  GK + C  +  + +    +    +   +  +
Sbjct: 60  D-----------AFDTDLMVEDLR-TLCAGKTIHCPVYDYTIHNRSNDTVEVKPTKVVIV 107

Query: 121 QEI------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + I      +++++M D  I +D   D+ + R   R        LD    + +   +   
Sbjct: 108 EGILIFENKALRDLM-DIKIFVDTDADVRILRRILRDVKERGRSLDSVIDQYLTTVKPMH 166

Query: 175 QIFLDIARNQPDRCHIVDSAHS---FQSVATNILNIVWEL 211
           + F+  +R   D   ++D  H+    + +   I + V E 
Sbjct: 167 EQFVQPSRQYAD-IVVLDGGHNLVALEMITQRIKSHVEEA 205


>gi|257869525|ref|ZP_05649178.1| ABC transporter [Enterococcus gallinarum EG2]
 gi|9294729|gb|AAF86640.1|AF162694_1 ABC transporter [Enterococcus gallinarum]
 gi|257803689|gb|EEV32511.1| ABC transporter [Enterococcus gallinarum EG2]
          Length = 269

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 19/127 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MNSG FI+  G  GAGK+T ++ +   +   +   V   +E         ++ +      
Sbjct: 33  MNSGDFITIIGGNGAGKSTLLNSIAGTIPTEQGKIVLGDKEITRHSVTRRSKEISRVFQD 92

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              G         A RL  VE  +  A   G++    R   S     G +   +  F + 
Sbjct: 93  PRMG--------TAVRL-TVEENLALAYKRGQV----RGFSS-----GVKGKHRAFFKEK 134

Query: 120 LQEISVQ 126
           L  +++ 
Sbjct: 135 LARLNLG 141


>gi|258542048|ref|YP_003187481.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633126|dbj|BAH99101.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636183|dbj|BAI02152.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639238|dbj|BAI05200.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642292|dbj|BAI08247.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645347|dbj|BAI11295.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648402|dbj|BAI14343.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651455|dbj|BAI17389.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654446|dbj|BAI20373.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-12]
          Length = 222

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 73/233 (31%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I F G  GAGK T   LL+     +Q    D+       G+   + A+ ++      +  
Sbjct: 3   IIFLGPPGAGKGTQSKLLEERYGLIQISTGDMLRAEVAKGSETGKQAKALM---DAGKLV 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   I    +R      + +     G   + D F          R  +Q   LDS+  +
Sbjct: 60  PDELIIAMLKSR------IAQADCQNGF--ILDGF---------PRTLAQAEELDSM--L 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------D-----YFER 164
           S      D  + LD+  +I   R+  R++                     D      F+R
Sbjct: 101 SSDGKKIDTVLFLDVDEEILADRISGRFTCGNCGKTYNEVSNPPKVEGVCDSCGSHEFKR 160

Query: 165 KDVMIHEKRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208
           +     E   +    +  +         +  R H ++   S   V   I + +
Sbjct: 161 RADDKRETVVERLKEYRKLTAPILPFYEKTGRLHKINGMLSASEVTGEIEDAL 213


>gi|91088283|ref|XP_968462.1| PREDICTED: similar to KTI12 protein, putative [Tribolium
          castaneum]
          Length = 275

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 11/91 (12%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G+  +GKTT  + LK+F +    +VHV  E      A   ++   S    E    
Sbjct: 3  LIVVTGVPCSGKTTRSTELKQFFESHGKEVHVVSEFDQIIKANFEKNAFFSDAAAEKHIR 62

Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
          +            +++ +   + +  +++ D
Sbjct: 63 S-----------LLKSEVLKLITQKNVVILD 82


>gi|325973233|ref|YP_004250297.1| iron(III) dicitrate ABC transporter ATP-binding protein [Mycoplasma
           suis str. Illinois]
 gi|323651835|gb|ADX97917.1| iron(III) dicitrate ABC transporter, ATP-binding protein
           [Mycoplasma suis str. Illinois]
          Length = 367

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV 53
           +NSG FI   G  G+GK+T   ++   L      V    +E         AR+V
Sbjct: 167 LNSGKFIVVVGSNGSGKSTIAKIIVHLLSNYEGKVLWAGKELKDISIKSFARNV 220


>gi|302671210|ref|YP_003831170.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio
           proteoclasticus B316]
 gi|302395683|gb|ADL34588.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio
           proteoclasticus B316]
          Length = 510

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 45/206 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G+GKTT   +L   L   + ++  T          +   +  + G + F    
Sbjct: 341 IILEGFMGSGKTTVSEILADKL---DLELLDTDAAIVEAEGRSISDIFETDGEESFRDME 397

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            A++  A+  +H   +          ++            G     +    + LQE+   
Sbjct: 398 TALLETAS-SEHFREM----------VIS----------LGGGLVLRKENRELLQELG-- 434

Query: 127 EVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                  + L    +   +RV+   +R  L+ +  L    +         R    ++A +
Sbjct: 435 -----KVVYLRTKPETVYERVRYDDSRPLLKTADPLSTIRKMQSD-----RGSIYELAAD 484

Query: 184 QPDRCHIVDS-AHSFQSVATNILNIV 208
                 I+D+   +   +A  I+  +
Sbjct: 485 F-----IIDTDDLTPSEIADRIIEEL 505


>gi|291243692|ref|XP_002741735.1| PREDICTED: thymidine kinase-like [Saccoglossus kowalevskii]
          Length = 258

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 24/163 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I  EG  G+GKTT +     +        V    EP  +       +V    G+    A 
Sbjct: 38  IVVEGNIGSGKTTFL----EYFNNMPGIQVV--EEPIDSWRNVKGHNVF---GLMYQDAT 88

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQH-------- 114
             ++ F    +      +R         L +R + S+   +     R             
Sbjct: 89  RWSLTFQTY-VQLTMVQMRTRKQTHPTRLMERSIYSAKYCFVENLYRSGKMPDCEYAVLT 147

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            + D L   ++   M D  + L    +  LKR++ R+   E+ 
Sbjct: 148 EWFDWLIS-NIDLKM-DLMVYLRTSPENCLKRIKERHRSEETG 188


>gi|71006610|ref|XP_757971.1| hypothetical protein UM01824.1 [Ustilago maydis 521]
 gi|46097472|gb|EAK82705.1| hypothetical protein UM01824.1 [Ustilago maydis 521]
          Length = 307

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 8/72 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--------LLS 56
           LF++ +G +G+GKTT    L + L+     V V          E  R V        LLS
Sbjct: 41  LFVAMQGPQGSGKTTVTRSLVQHLESIGLTVGVLSTDDLYHTHENLRRVAEESAANPLLS 100

Query: 57  CGVDEFGAEAEA 68
                   + E 
Sbjct: 101 GRGQPGTHDIEL 112


>gi|323344278|ref|ZP_08084504.1| hypothetical protein HMPREF0663_11040 [Prevotella oralis ATCC
           33269]
 gi|323095007|gb|EFZ37582.1| hypothetical protein HMPREF0663_11040 [Prevotella oralis ATCC
           33269]
          Length = 393

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 8/100 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+   I   G   AGKTT +  +        + V    E     +     ++  + G  
Sbjct: 31  MNNIKKIVLTGGPCAGKTTALVKVIEHFSSLGFKVFTIPEVPTLFSQSGMDYLTTNKGFF 90

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK---ILLCDR 97
             G +A   +  A     +E+       E K   I++CDR
Sbjct: 91  YEGEKATLEIQMA-----LEDKFMRMASECKEPTIIVCDR 125


>gi|257878886|ref|ZP_05658539.1| deoxynucleoside kinase [Enterococcus faecium 1,230,933]
 gi|257881522|ref|ZP_05661175.1| deoxynucleoside kinase [Enterococcus faecium 1,231,502]
 gi|257890744|ref|ZP_05670397.1| deoxynucleoside kinase [Enterococcus faecium 1,231,410]
 gi|258615042|ref|ZP_05712812.1| deoxynucleoside kinase [Enterococcus faecium DO]
 gi|293556926|ref|ZP_06675487.1| deoxyguanosIne kinase [Enterococcus faecium E1039]
 gi|293560307|ref|ZP_06676804.1| deoxyguanosIne kinase [Enterococcus faecium E1162]
 gi|293567759|ref|ZP_06679100.1| deoxyguanosine kinase [Enterococcus faecium E1071]
 gi|294620920|ref|ZP_06700121.1| deoxyguanosIne kinase [Enterococcus faecium U0317]
 gi|314938979|ref|ZP_07846244.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04]
 gi|314943470|ref|ZP_07850237.1| deoxynucleoside kinase [Enterococcus faecium TX0133C]
 gi|314948237|ref|ZP_07851631.1| deoxynucleoside kinase [Enterococcus faecium TX0082]
 gi|314951597|ref|ZP_07854643.1| deoxynucleoside kinase [Enterococcus faecium TX0133A]
 gi|314991540|ref|ZP_07857016.1| deoxynucleoside kinase [Enterococcus faecium TX0133B]
 gi|314994873|ref|ZP_07860000.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01]
 gi|257813114|gb|EEV41872.1| deoxynucleoside kinase [Enterococcus faecium 1,230,933]
 gi|257817180|gb|EEV44508.1| deoxynucleoside kinase [Enterococcus faecium 1,231,502]
 gi|257827104|gb|EEV53730.1| deoxynucleoside kinase [Enterococcus faecium 1,231,410]
 gi|291589344|gb|EFF21151.1| deoxyguanosine kinase [Enterococcus faecium E1071]
 gi|291599531|gb|EFF30547.1| deoxyguanosIne kinase [Enterococcus faecium U0317]
 gi|291601010|gb|EFF31301.1| deoxyguanosIne kinase [Enterococcus faecium E1039]
 gi|291605757|gb|EFF35194.1| deoxyguanosIne kinase [Enterococcus faecium E1162]
 gi|313590855|gb|EFR69700.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01]
 gi|313593824|gb|EFR72669.1| deoxynucleoside kinase [Enterococcus faecium TX0133B]
 gi|313596291|gb|EFR75136.1| deoxynucleoside kinase [Enterococcus faecium TX0133A]
 gi|313597842|gb|EFR76687.1| deoxynucleoside kinase [Enterococcus faecium TX0133C]
 gi|313641688|gb|EFS06268.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04]
 gi|313645370|gb|EFS09950.1| deoxynucleoside kinase [Enterococcus faecium TX0082]
          Length = 219

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 46/236 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I   G  GAGK++   ++      +                 A    +    V       
Sbjct: 4   IVLAGTIGAGKSSLTEMMAEHFDSQ-----------------AFYESIDDNEVLPLFYAN 46

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112
            E  A +     L+     I+ A+ +   +L DR  + DS           A + E    
Sbjct: 47  PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 105

Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +
Sbjct: 106 DELLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYY 162

Query: 171 EKRRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
           ++  + +        +   I +D           + + V   I   + E+ Q +V+
Sbjct: 163 KELNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVA 218


>gi|87199291|ref|YP_496548.1| adenylate kinase [Novosphingobium aromaticivorans DSM 12444]
 gi|123489944|sp|Q2G8V9|KAD_NOVAD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|87134972|gb|ABD25714.1| Adenylate kinase [Novosphingobium aromaticivorans DSM 12444]
          Length = 216

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 74/236 (31%), Gaps = 59/236 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    L     R       T         +  R  +        G +A
Sbjct: 3   IILLGPPGAGKGTQAQRLVE---RHGMKQLST--------GDMLRAAVK--AETPVGLKA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSL 120
           +A++ A      V + I  AL      + D  LD+  A QG       R + Q   LD++
Sbjct: 50  KAVMEA---GQLVSDEIVSAL------IGDE-LDAMPAGQGAIFDGYPRTAPQAESLDAI 99

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER----------KDVM 168
             +  +    D  I LD+  D  ++R+  RY+         D FE+              
Sbjct: 100 --LESRGRKLDHVIELDVNEDALVERITGRYTCATCGKGYHDKFEKPAVEGTCDKCGGHE 157

Query: 169 IHEK-------RRQIFLD-IARNQP------DRCHI--VDSAHSFQSVATNILNIV 208
              +        R    +  A+  P       R  +  VD       V   I  I+
Sbjct: 158 FKRRPDDNEETVRTRMAEYRAKTAPILPIYESRGIVSRVDGMADMDDVTAAIEAIL 213


>gi|73544471|ref|XP_848130.1| dynein heavy chain [Leishmania major strain Friedlin]
 gi|321438483|emb|CBZ12242.1| putative dynein heavy chain [Leishmania major strain Friedlin]
          Length = 4454

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G+GK+T +++L++ LQ    +V +       P A   R +L   G  +     
Sbjct: 2121 VVLVGPSGSGKSTLLNILRKALQTMQIEVPMHVM---NPKAMTRRRLL---GYMDADTRE 2174

Query: 67   EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                ++  AAR     +V++        +LCD                   +++SL  +
Sbjct: 2175 WYDGVLTVAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2215


>gi|325989675|ref|YP_004249374.1| ferrichrome ABC transporter ATP-binding [Mycoplasma suis KI3806]
 gi|323574760|emb|CBZ40416.1| ferrichrome ABC transporter, ATP-binding [Mycoplasma suis]
          Length = 367

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV 53
           +NSG FI   G  G+GK+T   ++   L      V    +E         AR+V
Sbjct: 167 LNSGKFIVVVGSNGSGKSTIAKIIVHLLSNYEGKVLWAGKELKDISIKSFARNV 220


>gi|238028038|ref|YP_002912269.1| adenylylsulfate kinase [Burkholderia glumae BGR1]
 gi|237877232|gb|ACR29565.1| Adenylylsulfate kinase [Burkholderia glumae BGR1]
          Length = 173

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 66/212 (31%), Gaps = 56/212 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L   L+ +                   R ++L       G  ++   
Sbjct: 6   GLPGAGKSTIAKALHEALKARG-----------------VRTIILDGDTLRGGLCSDLGF 48

Query: 71  FAAARLDHVENVIRPAL---MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            AA R +++      A     E  +++    + +    Q  RD ++ +  +   E  +  
Sbjct: 49  SAADRNENIRRFAHVAALFRQESYVVI----VATISPLQAHRDLARGIVGEGFVETFIAT 104

Query: 128 VMPDCTIILDL----PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                   LD+           +       + +   D +E+                   
Sbjct: 105 P-------LDICRERDPKGMYAKAMQGKLAQFTGVSDTYEQPGAAD-------------- 143

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                  VD++   + VA ++  I  +L ++R
Sbjct: 144 -----VTVDTSQ--EEVAASVERIAGQLRRQR 168


>gi|182420523|ref|ZP_02643397.2| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens NCTC 8239]
 gi|182380180|gb|EDT77659.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens NCTC 8239]
          Length = 228

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74
           K+T +++L          +    EP          + +L     +    +  +   F   
Sbjct: 37  KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 83

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127
           R  H++      L+E    + DR +     +         + ++        L+ +    
Sbjct: 84  RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 138

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186
             P   + L++ VD  +KR+Q R    E       ER+     EK    + +   N    
Sbjct: 139 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 191

Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223
               ++     F++V  +    V  L+ K++S L + K
Sbjct: 192 PILRINVDELDFENVPED-REYVLNLIDKKLSKLENNK 228


>gi|196043179|ref|ZP_03110417.1| hypothetical protein BC03BB108_2483 [Bacillus cereus 03BB108]
 gi|225864535|ref|YP_002749913.1| hypothetical protein BCA_2640 [Bacillus cereus 03BB102]
 gi|229184783|ref|ZP_04311976.1| uridine kinase [Bacillus cereus BGSC 6E1]
 gi|196025488|gb|EDX64157.1| hypothetical protein BC03BB108_2483 [Bacillus cereus 03BB108]
 gi|225788178|gb|ACO28395.1| hypothetical protein BCA_2640 [Bacillus cereus 03BB102]
 gi|228598687|gb|EEK56314.1| uridine kinase [Bacillus cereus BGSC 6E1]
          Length = 186

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 72/220 (32%), Gaps = 55/220 (25%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           MN     I+   + G GKTT    L + L   +   +D +  +    T   +        
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTENLTQKLTNSKALYFDSYHFKN-CPTDICKWI------ 53

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              +    +   +      + H+   I  A ++  I+      D  +AY           
Sbjct: 54  --DEGANYDEWVLTPLIHDIQHL---IGEANVDYIIV------DYPFAY------LNSEM 96

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173
            + +          D TI +D P+DI + R   R         D+ E     IH      
Sbjct: 97  REFI----------DVTIFIDTPLDIAMARRILR---------DFKEDTIDEIHNDLKHY 137

Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208
               R+ +L+     +P+   I+D + S   +  + +  +
Sbjct: 138 MTFARKAYLEAIHTVKPNSDIILDGSLSVSEIMNHAVEEL 177


>gi|325680323|ref|ZP_08159883.1| guanylate kinase [Ruminococcus albus 8]
 gi|324108032|gb|EGC02288.1| guanylate kinase [Ruminococcus albus 8]
          Length = 215

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 79/225 (35%), Gaps = 36/225 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I      G GK T +  +    +        TR P     A    + L     ++  A
Sbjct: 9   KLIIVSAPSGCGKGTIMHKVFNDDEVFYSVSCTTRPPRPEDIAGVTYNFLTVGEFEKMIA 68

Query: 65  EAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           E   +  A    ++    I+P    L  GK ++ +  ++++ A+Q               
Sbjct: 69  EDGFLEHAFYSGNYYGTPIKPVEDNLAAGKDVILE--IETNGAFQ--------------- 111

Query: 122 EISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL- 178
              V+E+ PD + +  LP  +    +R+  R +  E        +    I +  R  ++ 
Sbjct: 112 ---VKELRPDASSLFILPPSVAELDRRLHKRATEDEETIQKRVAQAAGEIEKSDRYDYVI 168

Query: 179 ---DIARNQPDRCHIVDSAHSFQSVA-------TNILNIVWELVQ 213
              D+ +   D C ++D     +  A        +I  ++ E+++
Sbjct: 169 MNDDLDKAVEDFCAVIDGIRGVKEAAVRFSPENEDIKKMIREVLE 213


>gi|239830910|ref|ZP_04679239.1| Pantothenate kinase [Ochrobactrum intermedium LMG 3301]
 gi|239823177|gb|EEQ94745.1| Pantothenate kinase [Ochrobactrum intermedium LMG 3301]
          Length = 213

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 21/159 (13%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
           G  I    G  GAGK+T    L   + +      + V  +      A   R  LLS    
Sbjct: 22  GRLIVAVAGPPGAGKSTMSDYLLHAINKGGDAPSIVVPMDGFHLDDAILDRRGLLSRKG- 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAYQGERDSSQHLFLD 118
                       A  L  ++        +G++ +   DR L+ S A          + L 
Sbjct: 81  --SPPTFDCAGFAVLLQRLKQ------ADGEVFIPVFDRSLELSRAAASVVGPEHRVLLV 132

Query: 119 SLQEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
               + + +     + P  D T+ LD+P D   +R+ +R
Sbjct: 133 EGNYLLLDQQPWAQLAPFFDLTVYLDVPFDELERRLTDR 171


>gi|195489185|ref|XP_002092630.1| GE11560 [Drosophila yakuba]
 gi|194178731|gb|EDW92342.1| GE11560 [Drosophila yakuba]
          Length = 678

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 59 MKTGDLIAILGGSGAGKTTLLAAISQRLR 87


>gi|182413680|ref|YP_001818746.1| adenylate kinase [Opitutus terrae PB90-1]
 gi|177840894|gb|ACB75146.1| adenylate kinase [Opitutus terrae PB90-1]
          Length = 389

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 41/221 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK T    L +                     +  R  +   G  + G EA
Sbjct: 4   IALFGPPGAGKGTQSEFLIKR-----------YNLFYISTGDLLRKEM--AGKTKLGLEA 50

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           ++I+ A      V + I   ++E  I       D++                 +Q   ++
Sbjct: 51  QSIIAAGG---LVSDEIIVQIIEKTI------TDNT---GCNGFLFDGFPRTYIQAYILE 98

Query: 127 EVMPDC------TIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQ 175
            +M          I L +P +  ++R+  R   S R          +    ++K     Q
Sbjct: 99  GLMLKLHTSLSCLISLKVPEEESVRRLLKRGATSGRSDDNESVIRNRLREYNQKTLPVLQ 158

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            +          C  VD   S   V   I  +V   + KR+
Sbjct: 159 FY-----RDKGICTEVDGTRSIDEVTAQITELVSAELSKRL 194


>gi|225437290|ref|XP_002262984.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297743850|emb|CBI36820.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 69/219 (31%), Gaps = 46/219 (21%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVH---------VTREPGGTP--AAEAARHVLLS 56
           G+ G   +GK+T  +L     +     V          + +  GG     A     +LL 
Sbjct: 5   GLTGGIASGKSTVSNL----FKVHGIPVVDADLVARDVLKKGSGGWRKVVAAFGNEILLD 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G  +     + +     +   +  ++ P +  G              ++      + + 
Sbjct: 61  NGEVDRAKLGQIVFSDPGKRQLLNRLLAPFISSGIF---------WEVFKLWMKGFKVIV 111

Query: 117 LDS--LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEK 172
           LD   L E  +     P   +   +  +  L+R+  R    E    +    +  +     
Sbjct: 112 LDVPLLFEAKMDGWTKPIIVVW--VDPETQLQRLLARDRASEEDARNRINAQMSLD---- 165

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                L  ++       ++D+  S + +     N+++++
Sbjct: 166 -----LKRSKAD----IVIDNTGSLEDLNEQFQNVLFQV 195


>gi|116249496|ref|YP_765334.1| hypothetical protein pRL90039 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254144|emb|CAK03748.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 528

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 34/210 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ++  G+ G+GKTT   +L   +             G  P A       +   +    
Sbjct: 339 GRLVAVGGLSGSGKTTLAEVLAPRI-------------GLAPGARIIESDRIRKAMHGVP 385

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           AE   +  AA R +    V +  +   +++L +    S+ A   +    + +    ++E 
Sbjct: 386 AETR-LPQAAYRPEVSAKVYQEMVWRARLILAEG--GSAVA---DAVFDKPVNRRMIEEA 439

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + +   P     L+    +  +RV  R      A +D      ++ H+        +A  
Sbjct: 440 AEEGHHPFSAFWLEADPALLWQRVAARVGSPSDATVD------ILAHQ--------LAHE 485

Query: 184 QPDR-CHIVDSAHSFQSVATNILNIVWELV 212
                   +D+      +A  I+  + E V
Sbjct: 486 TGAVAWPRLDATQRAARLADEIMRRIEEKV 515


>gi|300712048|ref|YP_003737862.1| ATPase [Halalkalicoccus jeotgali B3]
 gi|299125731|gb|ADJ16070.1| ATPase [Halalkalicoccus jeotgali B3]
          Length = 616

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 2/49 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
             G+ IS  G  GAGK+T    +  FL    Y V    +P         
Sbjct: 263 QRGILIS--GSPGAGKSTFAQAVAEFLNDSGYSVKTMEKPRDLQVGPEI 309


>gi|257887847|ref|ZP_05667500.1| deoxynucleoside kinase [Enterococcus faecium 1,141,733]
 gi|257896535|ref|ZP_05676188.1| deoxynucleoside kinase [Enterococcus faecium Com12]
 gi|257823901|gb|EEV50833.1| deoxynucleoside kinase [Enterococcus faecium 1,141,733]
 gi|257833100|gb|EEV59521.1| deoxynucleoside kinase [Enterococcus faecium Com12]
          Length = 217

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 36/231 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++   ++      +  Y+     E      A                 E
Sbjct: 2   IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114
             A +     L+     I+ A+ +   +L DR  + DS           A + E      
Sbjct: 47  QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171
           L  + ++E+  +  +  PD  + + +  D  L+R++ R    E    D         ++ 
Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLSFDPSLYDYYKELNR 165

Query: 172 KRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +  Q + +       +   DR + V+ + + + V   I   + E+ Q  ++
Sbjct: 166 RYDQWYEEYKESPKIQIDGDRYNFVEDSQAKEEVLKMIEEKLAEIRQTELA 216


>gi|226357367|ref|YP_002787107.1| guanylate kinase [Deinococcus deserti VCD115]
          Length = 242

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 46/212 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTRE--PGGTPAAEAARHVLLSC 57
            GL I   G  G GK T   L   +L+ ++        TRE  PG     +     + + 
Sbjct: 21  RGLLIVMTGASGVGKGTLREL---WLRDQDVFYSTSWTTREARPGEVDGVDYI--FVSAD 75

Query: 58  GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             ++   +   +  A+   +H       I  AL  G+ ++ +  ++   A Q        
Sbjct: 76  AFEQKVQQGGFLEHASFVGNHYGTPVEPIEAALSRGQDVILE--IEVEGAMQVRDRMGDE 133

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                               I  +P    L  ++ R   R +   +  E++      + R
Sbjct: 134 AI---------------LVFI--MPP--SLTELRRRLEGRATETPERIEKR----LARAR 170

Query: 175 QIFLDIARNQPDRCHIVD-----SAHSFQSVA 201
           +   +I      R  IV+     +    ++V 
Sbjct: 171 E---EIMHAHAFRYVIVNDDLNRAVQELEAVQ 199


>gi|297379817|gb|ADI34704.1| Adenylate kinase isoenzyme 1 [Helicobacter pylori v225d]
          Length = 200

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEHILSF 189


>gi|260558445|ref|ZP_05830641.1| deoxynucleoside kinase [Enterococcus faecium C68]
 gi|260075619|gb|EEW63925.1| deoxynucleoside kinase [Enterococcus faecium C68]
          Length = 217

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 42/234 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++   ++      +  Y+     E      A                 E
Sbjct: 2   IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114
             A +     L+     I+ A+ +   +L DR  + DS           A + E      
Sbjct: 47  QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +++
Sbjct: 106 LLKNMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162

Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
             + +        +   I +D           + + V   I   + E+ Q +V+
Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVA 216


>gi|254718281|ref|ZP_05180092.1| putative fructose transport system kinase [Brucella sp. 83/13]
          Length = 232

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 41  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLELSRAAASVVRPEHRILLVEG 153

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190


>gi|150400486|ref|YP_001324252.1| signal recognition particle-docking protein FtsY [Methanococcus
           aeolicus Nankai-3]
 gi|150013189|gb|ABR55640.1| signal recognition particle-docking protein FtsY [Methanococcus
           aeolicus Nankai-3]
          Length = 383

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   GI G GKTT IS L   L    Y V +    G T  A A     L       GA+ 
Sbjct: 173 IVVVGINGTGKTTTISKLAYKLMNNGYSVVLAA--GDTFRAGAIEQ--LEEHAKNIGAKV 228

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 +     + + I  A   G  ++L D            R ++    +  ++++  
Sbjct: 229 IKHQKGSDGAAVIYDAINHAKARGISVVLAD---------TAGRQTTNINLMAEIKKVVR 279

Query: 126 QEVMPDCTII 135
               PD  + 
Sbjct: 280 VS-NPDLVVF 288


>gi|326434839|gb|EGD80409.1| hypothetical protein PTSG_11054 [Salpingoeca sp. ATCC 50818]
          Length = 211

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 20/102 (19%)

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--------------LDYFERKDVMIHEK 172
             +P   + LD P  + L R+  R +   +                LD  ++     H+ 
Sbjct: 103 GFVPGLAVFLDAPAQVCLDRLTLRRTDPITGKRYHLATNPPPSQDVLDRLKQHPDDEHDV 162

Query: 173 RR------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                   Q FL   ++   +   +DSA     V  ++ + +
Sbjct: 163 VHRRMMDAQAFLKELKDFYKKGVTIDSARPIGDVLASVESHL 204


>gi|317051779|ref|YP_004112895.1| ABC transporter-like protein [Desulfurispirillum indicum S5]
 gi|316946863|gb|ADU66339.1| ABC transporter related protein [Desulfurispirillum indicum S5]
          Length = 265

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 65/212 (30%), Gaps = 33/212 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-----LL 55
           ++ G  +S  G  G GK+T + LL+  L+ +   V      G  P A   R +     ++
Sbjct: 24  ISQGEIVSILGPNGCGKSTLLKLLRGVLKPQQGTV---SWQGQPPHAIKRREMACRCAVV 80

Query: 56  SCGVDEFGAEAEAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAY 105
           S             + + AR   +             I  AL    I+        S   
Sbjct: 81  SQSEQPLFGYTVEEMVSMARFARLGLTGTMGASDRQAIEEALQATDIV---HLRHKSIMR 137

Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
               +  +     +L + +         ++LD         +   +    +  L +  R+
Sbjct: 138 ISGGERQRVYLARALAQQAT-------VLLLD----EATSSLDLDHRWDTARLLQHMNRQ 186

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF 197
                 +     LD+A     R  ++++    
Sbjct: 187 QSTTIVQVSHD-LDLAAATSHRIILLNATGQI 217


>gi|265983242|ref|ZP_06095977.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306838893|ref|ZP_07471721.1| fructose transport system kinase [Brucella sp. NF 2653]
 gi|264661834|gb|EEZ32095.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306406009|gb|EFM62260.1| fructose transport system kinase [Brucella sp. NF 2653]
          Length = 218

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 27  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 87  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLELSRAAASVVRPEHRILLVEG 139

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176


>gi|188527534|ref|YP_001910221.1| adenylate kinase [Helicobacter pylori Shi470]
 gi|238691925|sp|B2UTK9|KAD_HELPS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|188143774|gb|ACD48191.1| adenylate kinase [Helicobacter pylori Shi470]
          Length = 191

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V++     + R   R     D     +++ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEMVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189


>gi|115533312|ref|NP_001041178.1| hypothetical protein W08A12.1 [Caenorhabditis elegans]
 gi|310774946|gb|ADP21891.1| Hypothetical protein W08A12.1d [Caenorhabditis elegans]
          Length = 485

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L  F +   + V    E          +   L           
Sbjct: 92  IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 150

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             ++    ++++   N          +++CDR      AY    D  +   L  L 
Sbjct: 151 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 203


>gi|25148997|ref|NP_504030.2| hypothetical protein W08A12.1 [Caenorhabditis elegans]
 gi|18250263|gb|AAL65797.1|U97010_1 Hypothetical protein W08A12.1a [Caenorhabditis elegans]
          Length = 501

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L  F +   + V    E          +   L           
Sbjct: 108 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 166

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             ++    ++++   N          +++CDR      AY    D  +   L  L 
Sbjct: 167 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 219


>gi|17565178|ref|NP_504029.1| hypothetical protein W08A12.1 [Caenorhabditis elegans]
 gi|14916384|gb|AAK73903.1|U97010_2 Hypothetical protein W08A12.1b [Caenorhabditis elegans]
          Length = 444

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L  F +   + V    E          +   L           
Sbjct: 51  IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 109

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             ++    ++++   N          +++CDR      AY    D  +   L  L 
Sbjct: 110 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 162


>gi|25149005|ref|NP_741519.1| hypothetical protein W08A12.1 [Caenorhabditis elegans]
 gi|18250264|gb|AAL65798.1|U97010_3 Hypothetical protein W08A12.1c [Caenorhabditis elegans]
          Length = 438

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L  F +   + V    E          +   L           
Sbjct: 45  IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 103

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             ++    ++++   N          +++CDR      AY    D  +   L  L 
Sbjct: 104 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 156


>gi|402298|gb|AAC37214.1| brown protein [Drosophila melanogaster]
 gi|745455|prf||2016284A brown gene
          Length = 675

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84


>gi|57168971|ref|ZP_00368100.1| adenylylsulfate kinase [Campylobacter coli RM2228]
 gi|57019637|gb|EAL56326.1| adenylylsulfate kinase [Campylobacter coli RM2228]
          Length = 193

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 38/143 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + +++ L  + +  +                 LL       G  ++ 
Sbjct: 30  FTGLSGSGKSTLANAVEKKLFEQGFHTY-----------------LLDGDNVRHGLNSDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A+R++++     + +  +  G I+LC        A+    +  + L  D L+E   
Sbjct: 73  GFDEASRVENIRRIGELCKLFMDAGMIVLC--------AFISPFEKDRKLVKDLLEE--- 121

Query: 126 QEVMPD--CTIILDLPVDIGLKR 146
                D    I +D  +++  KR
Sbjct: 122 -----DEYIEIFVDTSLEVCEKR 139


>gi|95928720|ref|ZP_01311466.1| Uncharacterised P-loop ATPase protein UPF0042 [Desulfuromonas
           acetoxidans DSM 684]
 gi|95135065|gb|EAT16718.1| Uncharacterised P-loop ATPase protein UPF0042 [Desulfuromonas
           acetoxidans DSM 684]
          Length = 287

 Score = 41.2 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 45/136 (33%), Gaps = 19/136 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------VTREPGGTPAAEAARHVL 54
            FI   G+ G+GK+T   +    L+ + + V              + GG         ++
Sbjct: 2   RFIVITGLSGSGKSTAAKV----LEDEGFYVIDNFPLTLLPTFFEQGGGNVVDSVGVAIV 57

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL--LCD---RFLDSSYAYQGER 109
           +      F    E I  A  +  H   +      + +++        R   S+Y+     
Sbjct: 58  MDVRNPHFVTGYEQIFAAVRQAGHEPEIFFFDAADDELIRRFSTTRRRHPLSNYSTVSAA 117

Query: 110 DSSQHLFLDSLQEISV 125
              +   L  L++I+ 
Sbjct: 118 ICQERSLLQPLRDIAT 133


>gi|312139572|ref|YP_004006908.1| guanylate kinase gmk [Rhodococcus equi 103S]
 gi|311888911|emb|CBH48224.1| guanylate kinase GmK [Rhodococcus equi 103S]
          Length = 188

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 6/100 (6%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G  +   G    GK++ + LL+       + V   TR+P          H +     
Sbjct: 1   MRRGRLVVLAGPSAVGKSSVVRLLRERFPEVVFSVSATTRDPRPGEVDGQDYHFVTRDEF 60

Query: 60  DEFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILL 94
           D   A  + + +A       R       +R AL EGK +L
Sbjct: 61  DRMIAAGDLLEWAEIHGGLQRSGTPAEPVRRALSEGKPVL 100


>gi|237813093|ref|YP_002897544.1| adenylyl-sulfate kinase [Burkholderia pseudomallei MSHR346]
 gi|237505307|gb|ACQ97625.1| adenylyl-sulfate kinase [Burkholderia pseudomallei MSHR346]
          Length = 206

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRTGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|145349676|ref|XP_001419254.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579485|gb|ABO97547.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 229

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 65/242 (26%), Gaps = 76/242 (31%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   +GK T   ++ +                   A +  R  + +       A+ 
Sbjct: 27  IVIAGAPASGKGTQCEMIVKKF-----------GLTHISAGDLLRAAVAAGTDAGKKAKE 75

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLC---DRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                   R D V N         ++++    DR      A     D       +  + +
Sbjct: 76  -----YMDRGDLVPN---------EVVVTMVKDRLAQPDCAKGWLLDGYPRSE-EQAEAL 120

Query: 124 SVQEVMPDCTIILDLP------------------------------VDIGLKRVQNRYSL 153
               + PD  ++LD+P                               +I   R+  R   
Sbjct: 121 IESGIDPDLFLLLDVPDEILIDRVVGRRLDPVDGTIYHMTFFPPPTPEIA-ARLTQRSDD 179

Query: 154 RESACLDYFERKDVMIHEKRRQI----FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            E    +      + +H K        +  I +N       VD   + Q V  +I  ++ 
Sbjct: 180 TEEKAANR-----LAVHHKNVDAVVGKYESIMKN-------VDGNRAKQDVFKDIERLIK 227

Query: 210 EL 211
            +
Sbjct: 228 AM 229


>gi|55742547|ref|NP_001007057.1| deoxycytidine kinase [Danio rerio]
 gi|54035394|gb|AAH83277.1| Deoxycytidine kinase [Danio rerio]
 gi|182891024|gb|AAI64599.1| Dck protein [Danio rerio]
          Length = 263

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 40/191 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------AAEAARH 52
           IS EG   AGK+T + LL+     + ++V    EP                   ++ +  
Sbjct: 24  ISIEGNIAAGKSTFVRLLEEH--DREWEVVP--EPIARWCNVQTQHDDHEELTTSQKSGG 79

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI-------------LLCDRFL 99
            +L    ++    A      A     + + I+     GK+             +  DR++
Sbjct: 80  NVLQMMYEKPERWAYTFQSYACMS-RIRSQIKS--TNGKLREAENPVQFFERSVYSDRYI 136

Query: 100 DSSYAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
            +S  Y+ E  +     +       L +   + +  D  I L    +  L+R+  R    
Sbjct: 137 FASNLYESECVNETEWAIYQDWHSWLHKQFGKHIELDGIIYLRAKPERCLERLHLRGREE 196

Query: 155 ESA-CLDYFER 164
           E    L+Y E+
Sbjct: 197 EQGIPLEYLEK 207


>gi|50237513|gb|AAT71846.1| deoxyribonucleoside kinase [Rock bream iridovirus]
 gi|62421223|gb|AAX82343.1| deoxyribonucleoside kinase [Orange-spotted grouper iridovirus]
          Length = 210

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 61/202 (30%), Gaps = 30/202 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK++ +  L         +V +  EP  T                +    A A     
Sbjct: 31  GVGKSSLLRSLAN--THHGINVVL--EPTDTW------EPFFQLYCKDPARWAAAFQMM- 79

Query: 74  ARLDHVENVIRPALMEGKI-LLCDRF---LDSSYAYQGERDSSQHLFLDSLQ-EISVQEV 128
             + H    I  A  +  +  + +R      +  A+         +  D++   ++    
Sbjct: 80  --VIHSYRNIYSANKDNPLPTIIERSPQCCRAFVAWLYATGQLDTVSHDTINTHLAAVPW 137

Query: 129 MPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
             + T + L     +   R   R +   S   DY          K+ +     AR  PD 
Sbjct: 138 FSNVTQVYLRCSPTVAAARALARPNELNSCPPDYM-----AFLHKQWE-----ARVTPDT 187

Query: 188 CHIVDSAHSFQSVATNILNIVW 209
             I+D+     +V    + ++ 
Sbjct: 188 I-IIDAEQDMDTVRRQFIELLH 208


>gi|167825043|ref|ZP_02456514.1| adenylylsulfate kinase [Burkholderia pseudomallei 9]
 gi|167911766|ref|ZP_02498857.1| adenylylsulfate kinase [Burkholderia pseudomallei 112]
 gi|226199908|ref|ZP_03795458.1| adenylyl-sulfate kinase [Burkholderia pseudomallei Pakistan 9]
 gi|254191332|ref|ZP_04897836.1| adenylylsulfate kinase [Burkholderia pseudomallei Pasteur 52237]
 gi|157939004|gb|EDO94674.1| adenylylsulfate kinase [Burkholderia pseudomallei Pasteur 52237]
 gi|225927964|gb|EEH24001.1| adenylyl-sulfate kinase [Burkholderia pseudomallei Pakistan 9]
          Length = 206

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|291446616|ref|ZP_06586006.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291349563|gb|EFE76467.1| predicted protein [Streptomyces roseosporus NRRL 15998]
          Length = 318

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          I+F G++G GK+T    L+R L ++   V
Sbjct: 19 IAFLGMDGVGKSTLAQELERRLTQRGRPV 47


>gi|281203063|gb|EFA77264.1| adenylate kinase [Polysphondylium pallidum PN500]
          Length = 302

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 28/155 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++  G  G+GK T  + L+   +        T         +  R    S    E G + 
Sbjct: 43  VAIVGAPGSGKGTQSAKLE---RDYGLKPIST--------GQILRQA--SQEDSELGKDI 89

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++ + A   L  + +  V++  L +    L D +  ++   Q   D         L +  
Sbjct: 90  KSKLDAGQLLSDEFMFKVVKEYLSKINTYLLDGYPRTT---QQAED---------LDKWL 137

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESAC 158
             +  P D  + LD+P ++ ++R+Q+R+    S  
Sbjct: 138 ADKQTPLDFVLYLDVPEEVLIERIQDRWIHPSSGR 172


>gi|218675476|ref|ZP_03525145.1| hypothetical protein RetlG_30981 [Rhizobium etli GR56]
          Length = 169

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 41/201 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G GKT+    +   L+R+ + V                 VL   G  E G   E 
Sbjct: 8   IEGSSGTGKTS----VATELERRGFHVVH------------GDRVLAYVGDPETGVALEG 51

Query: 69  IVFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 R+  +  + I P + + + +  D        +      + H FLD         
Sbjct: 52  PPQGVDRVVWNYAHWIWP-VEKVRAITAD--TTHPATFFCGGSRNFHKFLDVF------- 101

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
              D   +LD+ V+   +R+  R         D  ER  V+ H +        +++ P  
Sbjct: 102 ---DKVFVLDIDVETLNRRLDGRPD-EPGFAPD--ERAVVLRHHRS-------SKHFPAG 148

Query: 188 CHIVDSAHSFQSVATNILNIV 208
              +D+  +  SV  +IL  +
Sbjct: 149 IG-IDTTGTIPSVVDDILAQL 168


>gi|328868080|gb|EGG16460.1| hypothetical protein DFA_08998 [Dictyostelium fasciculatum]
          Length = 272

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 40/140 (28%), Gaps = 29/140 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G   +GKTT  + + +        V +  E             L++       + 
Sbjct: 3   LIVMSGPPSSGKTTRANDIAKHFLEMGKKVIIINEESC----------LINKNQGYKDSV 52

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGERDSSQ---H 114
           +E           ++  +  +L +  +++ D        R+     A             
Sbjct: 53  SE-----KMTRGTLKAAVERSLAKDTVVISDSLNYIKGYRYELYCIARAAGTRLLLVYCD 107

Query: 115 LFLDSLQEISVQEVMPDCTI 134
              D  ++ + +    D TI
Sbjct: 108 TPRDQAKQWNTER---DATI 124


>gi|313624077|gb|EFR94159.1| conserved hypothetical protein [Listeria innocua FSL J1-023]
          Length = 176

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 70/213 (32%)

Query: 14  GAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+GKTT    + ++LQ   ++   +   RE      +++ +  LL+              
Sbjct: 10  GSGKTTLAKKVSKWLQIDFFETDRIVWKREETEVRRSDSEKAALLNT------------- 56

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                           L     ++             E    +    +S+ +        
Sbjct: 57  ---------------ILQNDNWII-------------EGVHLEAWTEESISQA------- 81

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK---------------DVMIHEKRRQ 175
           D  I LDLP     K+++++   R+   L   E+                D +  ++ + 
Sbjct: 82  DIIIYLDLP----KKQIRSQLIKRQFKQLLRIEKAHYVVRFSMLKKMFYWDDLFDQRTKP 137

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +  +  +  P +  I+     FQ +   IL I+
Sbjct: 138 LVNEKIKQHPAKWLIIKENMPFQKIQQKILQII 170


>gi|288931478|ref|YP_003435538.1| adenylate kinase [Ferroglobus placidus DSM 10642]
 gi|288893726|gb|ADC65263.1| adenylate kinase [Ferroglobus placidus DSM 10642]
          Length = 218

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 66/238 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   ++     +       T         +  R  +      E G +A+  +
Sbjct: 7   GPPGAGKGTQAKMIVE---KYGIPQIST--------GDILREAV--AKGTELGRKAKEYM 53

Query: 71  FAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               R + V          E + +P   +G   + D F  +    Q E        +   
Sbjct: 54  ---DRGELVPDEVVIGIVRERLSQPDCEKGF--ILDGFPRT--VRQAEALDEMLDEM--- 103

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY----F 162
                     D  I +++P +  +KR+  R   ++   +              D      
Sbjct: 104 ------GRKIDAVISIEVPEEEIVKRIVYRRICKQCGAVYNLIYNPPKVDGKCDKCGGEL 157

Query: 163 ERKDVMIHEKRRQIFLDIARN-QP--DRCHI------VDSAHSFQSVATNILNIVWEL 211
            ++D    E  R+ +       +P  +          VD   S + V   I +I+ ++
Sbjct: 158 YQRDDDKEEVVRERYRVYKEQTEPLKEYYRRTGVLYEVDGTKSIEEVFNEIDSILQKI 215


>gi|239943140|ref|ZP_04695077.1| hypothetical protein SrosN15_19256 [Streptomyces roseosporus NRRL
          15998]
 gi|239989598|ref|ZP_04710262.1| hypothetical protein SrosN1_20016 [Streptomyces roseosporus NRRL
          11379]
          Length = 311

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          I+F G++G GK+T    L+R L ++   V
Sbjct: 12 IAFLGMDGVGKSTLAQELERRLTQRGRPV 40


>gi|194885339|ref|XP_001976420.1| GG20023 [Drosophila erecta]
 gi|190659607|gb|EDV56820.1| GG20023 [Drosophila erecta]
          Length = 677

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 58 MKTGDLIAILGGSGAGKTTLLAAISQRLR 86


>gi|157016|gb|AAA28398.1| brown protein [Drosophila melanogaster]
          Length = 675

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84


>gi|328463310|gb|EGF35001.1| deoxynucleoside kinase [Lactobacillus rhamnosus MTCC 5462]
          Length = 185

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 14/101 (13%)

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-PDR 187
           +PD  + L +  D  L  +Q+R    E       + + V  + +    + D A+      
Sbjct: 73  LPDLAVYLKIDPDHELDEIQSRGRDMEDI---RQKPELVAYYRRVNAAYQDWAKGYTRSS 129

Query: 188 CHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220
              +D        SA    +V   I + + +L   ++SP +
Sbjct: 130 MITIDRDRYDFMHSAADRATVLDQIESKLVDL--GKLSPQT 168


>gi|309363328|emb|CAP26940.2| hypothetical protein CBG_06663 [Caenorhabditis briggsae AF16]
          Length = 474

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 3/110 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L  F +   + V    E          +   L           
Sbjct: 81  IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDAEQSYIFQR- 139

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             ++    ++++   N          +++CDR      AY  + D  + L
Sbjct: 140 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSQEDWQRML 188


>gi|318066025|ref|NP_001187564.1| guanylate kinase [Ictalurus punctatus]
 gi|308323375|gb|ADO28824.1| guanylate kinase [Ictalurus punctatus]
          Length = 197

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 33/179 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDV-HVTREP-----GGTPAAEAARHV 53
           M+    +   G  GAGK+T +  L +  +    + V H TR P      G       R  
Sbjct: 1   MSGPRPVVLSGPSGAGKSTLLKRLMQEYEGVFGFSVSHTTRNPRPGEENGKDYHFTTREK 60

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           +     +  G   E  VF+       ++ I     +  I + D                 
Sbjct: 61  MQEGIDN--GDFIENAVFSGNMYGTSKSAIEDVQAQNLICILD----------------- 101

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMI 169
            + L  ++ I   ++ P   I + +     +I  +R+++R +  E +     E   + +
Sbjct: 102 -VDLQGVKNIKQTDLNP---IYISIQPPSMEILEQRLRDRQTETEESLQKRLEAARIDM 156


>gi|308063593|gb|ADO05480.1| adenylate kinase [Helicobacter pylori Sat464]
          Length = 191

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189


>gi|294617091|ref|ZP_06696758.1| deoxyguanosIne kinase [Enterococcus faecium E1679]
 gi|291596649|gb|EFF27875.1| deoxyguanosIne kinase [Enterococcus faecium E1679]
          Length = 217

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 42/234 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++   ++      +  Y+     E      A                 E
Sbjct: 2   IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS---------QH 114
             A +     L+     I+ A+ +   +L DR  + DS   +                  
Sbjct: 47  QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVCVYDE 105

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +++
Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162

Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
             + +        +   I +D           + + V   I   + E+ Q +VS
Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVS 216


>gi|301096852|ref|XP_002897522.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262106982|gb|EEY65034.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 261

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 15/117 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++ EG  G GKT     L    + + YD+           A   + +L         +  
Sbjct: 10  VALEGCHGCGKT----ALCEEFEAQGYDILDEAFMDMPAYALHPQSLL--METSWVCSWF 63

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           E ++  A R       ++P     ++ + DR   S+  Y       + +  + ++E+
Sbjct: 64  ERVLRLADR-------VKP--GRKQVFIADRSPFSAVLYSANGHLLEPVIREQMREV 111


>gi|258541006|ref|YP_003175505.1| kinase [Lactobacillus rhamnosus Lc 705]
 gi|257152682|emb|CAR91654.1| Kinase [Lactobacillus rhamnosus Lc 705]
          Length = 173

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 63/211 (29%), Gaps = 50/211 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT    L++ L                 + +  R  +L+    
Sbjct: 2   MKQ--LIILRGNSGSGKTTTAKALRKHLTN-----------SLLISQDVVRRDMLAEKDK 48

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I   A          R      +I++ +  + S+  Y           L +L
Sbjct: 49  PNSPNIELIDLIA----------RFGFSHQQIVIVE-GILSAARY--------GQMLKAL 89

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLD 179
              + Q          DL  D  L+R  +R                  +H   R   +L 
Sbjct: 90  MNTADQS----LVYYFDLSFDETLRRHAHRPKAAAFGAE--------AMHRWFRPHDYLG 137

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +        H++ +  S  +V + IL  + +
Sbjct: 138 VPNE-----HLIQADQSQDTVVSRILADLNK 163


>gi|253741359|gb|EES98231.1| Deoxynucleoside kinase [Giardia intestinalis ATCC 50581]
          Length = 141

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 16/123 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +FIS  G+ GAGKTT    L    +   + V+   EP                    F  
Sbjct: 31  MFISISGLIGAGKTTLAEELA---KXMGFPVYY--EPVEDNI--YLEDFYKDMKTYGFPM 83

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
           +   +     R    + +I      G   + DR  + D+ +A    +  +       L +
Sbjct: 84  QVYLLN---RRYQQHQQIIW----SGDGAVQDRSIYEDAVFARILVKQGTCRSVTTRLIQ 136

Query: 123 ISV 125
           I  
Sbjct: 137 IYT 139


>gi|239982432|ref|ZP_04704956.1| ATP/GTP-binding protein [Streptomyces albus J1074]
          Length = 240

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 53/159 (33%), Gaps = 43/159 (27%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  +   G+ G+GK+T I    R  +  + D   TRE                      
Sbjct: 71  QGDLVVVSGLPGSGKSTLIRRTVRAARADSQD---TRE---------------QWEARLP 112

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCD----RFLDSSYAYQGERDSSQHLFL 117
            A   A+    ARL H    +R  L  G+ +++ D    R++    A +  R        
Sbjct: 113 AALPYALYRPLARLAHYA-ALRRLLRAGRSVVVHDCGTQRWVRHWLAREARRRG------ 165

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR 154
            +L             + LD+  D  L  +R + R   R
Sbjct: 166 RTLHM-----------VFLDVDPDTALDGQRARGRGVSR 193


>gi|126651267|ref|XP_001388358.1| ABC transporter protein [Cryptosporidium parvum Iowa II]
 gi|126117452|gb|EAZ51552.1| putative ABC transporter protein [Cryptosporidium parvum Iowa II]
          Length = 782

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 17/158 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
           + G  I   G  G+GK+T ++ L   L+ + Y++                  R V+    
Sbjct: 134 SPGQLIGIMGPSGSGKSTLLNALSGRLKGREYNIKGSVAINGFTDIDLGYLTRMVVQDDY 193

Query: 59  VDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQ 113
           +  +    E + + A  RL H     R    E  I + D    R +  +Y     +    
Sbjct: 194 LLPYLTIKETMDIVAGLRLPHYSKKDR---EEKIIEILDIMGLRHVQDTYVGGISKKGIS 250

Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149
              +  L  I+++ +   P   + LD     GL   + 
Sbjct: 251 GGEMKRLS-IALELIQNPP--ILFLD-EPTTGLDAARA 284


>gi|32399106|emb|CAD98346.1| putative ABC transporter protein, possible [Cryptosporidium parvum]
          Length = 774

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 17/158 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
           + G  I   G  G+GK+T ++ L   L+ + Y++                  R V+    
Sbjct: 126 SPGQLIGIMGPSGSGKSTLLNALSGRLKGREYNIKGSVAINGFTDIDLGYLTRMVVQDDY 185

Query: 59  VDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQ 113
           +  +    E + + A  RL H     R    E  I + D    R +  +Y     +    
Sbjct: 186 LLPYLTIKETMDIVAGLRLPHYSKKDR---EEKIIEILDIMGLRHVQDTYVGGISKKGIS 242

Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149
              +  L  I+++ +   P   + LD     GL   + 
Sbjct: 243 GGEMKRLS-IALELIQNPP--ILFLD-EPTTGLDAARA 276


>gi|257066455|ref|YP_003152711.1| guanylate kinase [Anaerococcus prevotii DSM 20548]
 gi|256798335|gb|ACV28990.1| guanylate kinase [Anaerococcus prevotii DSM 20548]
          Length = 202

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M  G  +   G  G GK T +  L        Y V   TR+         +   +     
Sbjct: 1  MKKGFLLVISGPSGVGKGTVLHDLMNTQTNLVYSVSATTRKKRDGEIEGVSYFYISHEEF 60

Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94
          ++   E + + +A    ++    ++ +   + EGKI++
Sbjct: 61 EKMIEEDKFLEYAHVHNNYYGTPKDFVENKINEGKIVI 98


>gi|194747145|ref|XP_001956013.1| GF24995 [Drosophila ananassae]
 gi|190623295|gb|EDV38819.1| GF24995 [Drosophila ananassae]
          Length = 223

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 14/99 (14%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL-------DIARN 183
           D  +  D   +  LKR+  R +       D  E+         RQ          DI   
Sbjct: 131 DLALYFDCSEETMLKRIMARAAAAAVQRADDNEKT-------IRQRLKTFKNNTNDILEL 183

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
             ++   +++      +   +   +  +++K+   ++++
Sbjct: 184 YNEKTLTINAERDVDDIFLEVCQAIDCVLKKKAKQVAAQ 222


>gi|85859092|ref|YP_461294.1| cytidylate kinase [Syntrophus aciditrophicus SB]
 gi|85722183|gb|ABC77126.1| cytidylate kinase [Syntrophus aciditrophicus SB]
          Length = 256

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   L I+ +G  G+GK+T    L R L
Sbjct: 33 MIKKLLITIDGPAGSGKSTASKALAREL 60


>gi|313672979|ref|YP_004051090.1| guanylate kinase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939735|gb|ADR18927.1| guanylate kinase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 203

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 4/99 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G         GAGKTT  + L +      Y V + TR P            +      
Sbjct: 3   KKGKLFVVSAPSGAGKTTLCNKLLQAYDDLIYSVSYTTRPPRFDEIDGKDYFFITVGKFK 62

Query: 61  EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD 96
           E     E I +A    ++       I   L +GK ++ D
Sbjct: 63  EMVDNDEFIEWAEVHGNYYGTSRTFIEENLKKGKNIILD 101


>gi|301070269|gb|ADK55561.1| GPN-loop GTPase 1 [Zonotrichia albicollis]
          Length = 351

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 11/94 (11%)

Query: 14 GAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGVDEF 62
          G+GKTT +  L   L  +            VH    P      +    + V+   G+   
Sbjct: 3  GSGKTTFVQRLAAHLHGQRCPPYVINLDPAVHSLPFPANIDIRDTVKYKEVMKQYGLGPN 62

Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
          G    ++   A R D V   I       K ++ D
Sbjct: 63 GGIVTSLNLFATRFDQVMKFIEKRQNASKYVIID 96


>gi|291301009|ref|YP_003512287.1| NB-ARC domain-containing protein [Stackebrandtia nassauensis DSM
           44728]
 gi|290570229|gb|ADD43194.1| NB-ARC domain protein [Stackebrandtia nassauensis DSM 44728]
          Length = 827

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 17/100 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTR--------EPGGTPAAEAARHVLLS 56
           I+ EG+ G GKTT    + + L+     YD  ++         EPG  P A   R  L+ 
Sbjct: 151 ITIEGMAGVGKTTLAQRVCQELESLGDGYDTRLSVDLRGYDPTEPGADPDA-VIRGFLVH 209

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            G      +    +  + R +H   ++        ++L D
Sbjct: 210 LG---MSPQHIDGLSPSERREHYARLL---AERRALILLD 243


>gi|120434670|ref|YP_860359.1| deoxyadenosine kinase [Gramella forsetii KT0803]
 gi|117576820|emb|CAL65289.1| deoxyadenosine kinase [Gramella forsetii KT0803]
          Length = 204

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 34/190 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   LL +         H   EP      E          ++ +    +     +
Sbjct: 10  GAGKTTLTRLLAK---------HYKWEPQFEDVLENPYLEDFYNKMERWSFNLQIYFLNS 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSS--------YAYQGERDSSQHLFLDSLQEI 123
                    I      GK ++ DR  + D+               RD   +  L  L E 
Sbjct: 61  RFRQ-----ILQIRESGKKIIQDRTIYEDAYIFAPNLHAMGLMTNRDFENYKSLFDLMES 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            VQ   PD  I L   +   + ++ +R    E++         +    +  + +     +
Sbjct: 116 VVQG--PDLLIYLRSSIPNLVAQIHSRGREYENSI-------SIDYLSRLNERYEAWVHD 166

Query: 184 Q-PDRCHIVD 192
                  I+D
Sbjct: 167 YSKGNLVIID 176


>gi|17647219|ref|NP_523824.1| brown, isoform A [Drosophila melanogaster]
 gi|115140|sp|P12428|BROWN_DROME RecName: Full=Protein brown
 gi|157014|gb|AAA28397.1| brown protein [Drosophila melanogaster]
 gi|21626629|gb|AAF47020.3| brown, isoform A [Drosophila melanogaster]
          Length = 675

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84


>gi|253575772|ref|ZP_04853107.1| guanylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844815|gb|EES72828.1| guanylate kinase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 196

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41
          M+ GL I   G  G GK T  + L++ +    Y V   TR+P
Sbjct: 5  MSKGLLIVLSGPSGVGKGTVCTELRKRMPELVYSVSATTRQP 46


>gi|229551236|ref|ZP_04439961.1| conserved hypothetical protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315399|gb|EEN81372.1| conserved hypothetical protein [Lactobacillus rhamnosus LMS2-1]
          Length = 172

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 63/211 (29%), Gaps = 50/211 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT    L++ L                 + +  R  +L+    
Sbjct: 1   MKQ--LIILRGNSGSGKTTTAKALRKHLTN-----------SLLISQDVVRRDMLAEKDK 47

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I   A          R      +I++ +  + S+  Y           L +L
Sbjct: 48  PNSPNIELIDLIA----------RFGFSHQQIVIVE-GILSAARY--------GQMLKAL 88

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLD 179
              + Q          DL  D  L+R  +R                  +H   R   +L 
Sbjct: 89  MNTADQS----LVYYFDLSFDETLRRHAHRPKAAAFGAE--------AMHRWFRPHDYLG 136

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +        H++ +  S  +V + IL  + +
Sbjct: 137 VPNE-----HLIQADQSQDTVVSRILADLNK 162


>gi|168047025|ref|XP_001775972.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672630|gb|EDQ59164.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 246

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 63/212 (29%), Gaps = 41/212 (19%)

Query: 11  GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK T  + +        L     D+       G       ++++    +      
Sbjct: 42  GGPGSGKGTQCAKIVDTYGFEHLSAG--DLLRAEINSGNENGTMIQNMIKEGKIVP---- 95

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                      +    ++  A+ E      D+FL   +     R+       D +     
Sbjct: 96  ----------AEVTVKLLEKAMKESD---NDKFLIDGF----PRNLDNRRCFDEVT---- 134

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182
             + P   +  + P ++  KR+  R   R    ++   ++  +  E        + +   
Sbjct: 135 -GIEPQFILFFECPEEVMEKRLLGRNQGRVDDNIETIRKRFKVFIESSLPVVSHYEEC-- 191

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
               + H +D+  +   V   I  +     QK
Sbjct: 192 ---GKVHKIDATKNPDEVFETIKPLFQNFKQK 220


>gi|290975101|ref|XP_002670282.1| predicted protein [Naegleria gruberi]
 gi|284083839|gb|EFC37538.1| predicted protein [Naegleria gruberi]
          Length = 273

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 83/236 (35%), Gaps = 64/236 (27%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  G GK+T   ++++++ +                 E +  +LL    ++     
Sbjct: 51  IACDGNIGVGKSTLCKVMQQYIHK-----------------EFSSSILLCHIEEDVEKNI 93

Query: 67  EAIV-FAAARLDH--------VENVIRPAL------------MEGKILLCDRFLDS-SYA 104
           E    + + + ++        +++ I+  L             +  +++ DR L +  + 
Sbjct: 94  ELFKKYLSNQREYGLEFQKWIIKDKIQQFLDKVSIWEDENVEQDKIVVIMDRSLLADRFV 153

Query: 105 YQGERDSSQHLFLDSLQEIS-----------VQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           +       + +  + LQ+             V    PD  IIL+  +D+ ++R+  R  +
Sbjct: 154 FFRNLLEKKLMSQEQLQDYEQTFEKMSREYPVNLFYPDFHIILEASIDVAMERINRRNRV 213

Query: 154 RESACLDY-----FERKDVMIHEK--RRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202
            ES+  +       E   + +++    R+    I     +         S  ++  
Sbjct: 214 GESSVYNKNYLQMIEDFHLDMYKTLPVREG--AIVYRHDNSI-----NQSITNIEQ 262


>gi|323339590|ref|ZP_08079864.1| dephospho-CoA kinase [Lactobacillus ruminis ATCC 25644]
 gi|323092985|gb|EFZ35583.1| dephospho-CoA kinase [Lactobacillus ruminis ATCC 25644]
          Length = 196

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 68/226 (30%), Gaps = 62/226 (27%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHV----LLSC 57
           G+ G    GK+T  + LK F       V    E        G+   E    +    +L  
Sbjct: 6   GLTGGIACGKSTISAYLKEF----GLPVIDADECSRAVVEKGSIGLEKLTEIFGNKILEN 61

Query: 58  GVDE---------FGAEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAY 105
                        F    +  +  +     +   I   L +     +++ D         
Sbjct: 62  DGTLNRKALGQIVFSDSEQLSLLNSVMEPLIREEISRRLNQENNADLVVLD--------- 112

Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                    L ++   +     +M   TI  D+P  I L+R+  R  L E       E +
Sbjct: 113 -------APLLIEQHYDKICDFIM---TI--DVPKKIQLERLIERDKLSEDEAKSRIESQ 160

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +  + R  F D          ++DS+ + +     ++  +  +
Sbjct: 161 ---LSSRERNGFAD---------VVIDSSGTVEQTRKQVIKWLKTI 194


>gi|188585314|ref|YP_001916859.1| deoxynucleoside kinase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350001|gb|ACB84271.1| deoxynucleoside kinase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 208

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 28/159 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  +G+ G+GKTT ++ L   L  +     V  E    P     R    +  V       
Sbjct: 6   IVVDGMTGSGKTTLVNHLANELNLE-----VMPEEFRDPYNLLYR---FADDVKWCYPMQ 57

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS---------SYAYQGERDSSQHL-F 116
              +           +      E +  + DR + S         +  Y  E+    +L F
Sbjct: 58  LNFLMT-------RYIQYTVASEHENYILDRSIYSDPVYAKLYYNMGYLSEKQYDNYLNF 110

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
            DSL+E       P C IIL+   D  ++R+ +R    E
Sbjct: 111 YDSLEE---DIKEPKCMIILNCSFDEIMRRIVDRGRSDE 146


>gi|218961024|ref|YP_001740799.1| DNA repair protein radA homolog (DNA repair protein sms homolog);
           putative ATP-dependent protease, with nucleoside triP
           hydrolase and multiheme cytochrome domains [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729681|emb|CAO80593.1| DNA repair protein radA homolog (DNA repair protein sms homolog);
           putative ATP-dependent protease, with nucleoside triP
           hydrolase and multiheme cytochrome domains [Candidatus
           Cloacamonas acidaminovorans]
          Length = 444

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 11/95 (11%)

Query: 3   SGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G+ I   G E G GK+T +  L  ++ ++N          G  +AE  R   L     +
Sbjct: 83  KGMLILI-GGEPGIGKSTLMLQLSEWMGKQNKKTLYCS---GEESAEQIR---LRSKHLK 135

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
             +E   ++      +H+   I     +  + + D
Sbjct: 136 VTSENIYLL-CTNNAEHIIEAIED--NKPDLAIVD 167


>gi|187735980|ref|YP_001878092.1| Guanylate kinase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426032|gb|ACD05311.1| Guanylate kinase [Akkermansia muciniphila ATCC BAA-835]
          Length = 200

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 13/105 (12%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVL 54
           M    G  +   G  G+GKTT    L R        V+     TR+P          H L
Sbjct: 4   MKQPLGTLLVVSGPSGSGKTT----LCRRATENGLCVYSISCTTRQPRPGEVNGVDYHFL 59

Query: 55  LSCGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCD 96
                D      + + +A     R   ++  I   L +GK ++ D
Sbjct: 60  TPAEFDARVERGDFLEYAEVHGNRYGTLKADILTLLEQGKNVVMD 104


>gi|149727672|ref|XP_001502194.1| PREDICTED: similar to XPA binding protein 1 [Equus caballus]
          Length = 374

 Score = 41.2 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNISKYVLID 122


>gi|227529614|ref|ZP_03959663.1| ATPase [Lactobacillus vaginalis ATCC 49540]
 gi|227350404|gb|EEJ40695.1| ATPase [Lactobacillus vaginalis ATCC 49540]
          Length = 609

 Score = 40.8 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 15/104 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-------------- 52
           ++  G  GAGKTT I+LL+RF + K   +++  +   + + +  R               
Sbjct: 397 VAIVGPTGAGKTTIINLLERFYEVKGGKIYLDGQNTRSMSRDELRSHIAMVLQDTWLFTG 456

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            +           +   V+ AARL H +N IR  L +G   + D
Sbjct: 457 TIFDNIKYGREDASADEVYQAARLAHADNFIRE-LPDGYDTILD 499


>gi|190572493|ref|YP_001970338.1| putative transcriptional regulator NadR [Stenotrophomonas
           maltophilia K279a]
 gi|190010415|emb|CAQ44023.1| putative TRANSCRIPTIONAL REGULATORY PROTEIN NADR (PROBABLY
           ASNC-FAMILY) [Stenotrophomonas maltophilia K279a]
          Length = 357

 Score = 40.8 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 38/196 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI   G E +GKTT   ++   LQ          E G T         L      E   +
Sbjct: 185 FI---GGESSGKTTLARVMAERLQ-----TVWVPEYGRT---------LWEQQGGELTPD 227

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            + +  A A+  H +   R A    + L CD    +     G          ++L++ + 
Sbjct: 228 -DLLRIAMAQPQHEDETARHA---HRWLFCD---TTPMVTLGYSGWMSGTAPEALRQAA- 279

Query: 126 QEVMP-DCTIIL--DLPVDIGLKRVQNRYSLRESACLDY-FERKDVMI-------HEKRR 174
             + P D   +   D+P D    RV   +  ++ A      E + V           +  
Sbjct: 280 --LRPYDLLFLCAPDIPFDQDGTRVGEAFRAQQHAWYVRELEARGVDYVLLEGGLEARIA 337

Query: 175 QIFLDIARNQPDRCHI 190
           ++  ++A+   +R  +
Sbjct: 338 RVHGELAKRADNRFSV 353


>gi|46115874|ref|XP_383955.1| hypothetical protein FG03779.1 [Gibberella zeae PH-1]
          Length = 197

 Score = 40.8 bits (95), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 60/215 (27%), Gaps = 46/215 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK---NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           LF+S  G   +GK++    L   L  K     D H           E           D 
Sbjct: 21  LFVS--GPTASGKSSVAKYLADELNLKFVEGDDFHPKSNVDKMSRGEPL------TDQDR 72

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G             +H  +  +    +  ++ C     S+   Q           ++  
Sbjct: 73  LGWLQAL-------HEHAIHHPKGPGADHLVVTC-----SALKRQY--RDLLRQGSENAG 118

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           ++ V  +       LD P ++  +R   R      + L                 F  + 
Sbjct: 119 DLRVHFLH------LDAPEEVLRQRAAARKGHFAGSAL-------------VHSQFEALE 159

Query: 182 R-NQPDR-CHIVDSAHSFQSVATNILNIVWELVQK 214
           R    +R    +    + + V    L  V EL+ +
Sbjct: 160 RPANDERDVLTISVDQTVEEVQREALARVTELLDE 194


>gi|331702091|ref|YP_004399050.1| deoxyadenosine kinase [Lactobacillus buchneri NRRL B-30929]
 gi|329129434|gb|AEB73987.1| Deoxyadenosine kinase [Lactobacillus buchneri NRRL B-30929]
          Length = 212

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKT+   +L + L            P    + E  R +     +     +  A +   
Sbjct: 9   GAGKTSLTKMLSQHLGT----------PAYYESVEHNRIL----PLFYKDPKKYAFLLQI 54

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQEISVQEVM-- 129
             L+   + I+ A    + +L DR  F DS   +             ++ +  ++ +M  
Sbjct: 55  DFLNRRMDDIKKAWQNDESVL-DRSIFEDSLLFHLNADLGRATETEVTIYDSLLENMMQE 113

Query: 130 ---------PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                    PD  I +++  +  L+R+Q R    E    D
Sbjct: 114 MPQTDHSKNPDLLIHINISFETMLRRIQKRGRSYEQIDND 153


>gi|167895130|ref|ZP_02482532.1| adenylylsulfate kinase [Burkholderia pseudomallei 7894]
          Length = 198

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|167816638|ref|ZP_02448318.1| adenylylsulfate kinase [Burkholderia pseudomallei 91]
          Length = 196

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|295398084|ref|ZP_06808133.1| deoxyguanosine kinase [Aerococcus viridans ATCC 11563]
 gi|294973603|gb|EFG49381.1| deoxyguanosine kinase [Aerococcus viridans ATCC 11563]
          Length = 224

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 37/195 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G+ G GKTT  +L++  L                P  E+    ++     +   E 
Sbjct: 4   ITVGGMIGLGKTTVTNLIRDEL-------------DFKPFYESVEDNIMLPYFYKASPEE 50

Query: 67  EAI-----VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQHL 115
           + +     +     L+     I+ A  E K +L DR  F D  +A      G     +  
Sbjct: 51  QLLKRYPFLTQLDFLNSRFKTIKQASREDKTVL-DRSIFEDWYFARVNTDIGRISEEEFS 109

Query: 116 FLDSLQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
             ++L    ++E+       PD  + L    +  + R++NR    E         +    
Sbjct: 110 IYENLSRNMMEELAEIPRKHPDLMLYLHGSFETVMTRIENRGRDFEQGE------ELTNY 163

Query: 170 HEKRRQIFLDIARNQ 184
           + +    + D   N 
Sbjct: 164 YHRLWSGYDDWVENH 178


>gi|269121289|ref|YP_003309466.1| cytidylate kinase [Sebaldella termitidis ATCC 33386]
 gi|268615167|gb|ACZ09535.1| cytidylate kinase [Sebaldella termitidis ATCC 33386]
          Length = 218

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 31/229 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV---------HVTREPGGTPAAEAARHVLL 55
           + I+ +G  G+GK+T   ++   L     D           + +E       E    +L 
Sbjct: 1   MIIAVDGPAGSGKSTVSKMIADELGITYLDTGAMYRLFAYKLMKENIDFSDREKELKLLE 60

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQH 114
              +D         +      D +      +      ++ + R  +     Q E   S+ 
Sbjct: 61  DLNIDMKDNR--FYLDNEDVTDKIRTRETSSNASKISVVKEVR--EKMVELQREFSKSKD 116

Query: 115 LFLDSLQEISVQEVMP--DCTIILDLPVDI-GLKRVQNRYSLRESACLDYFERK-----D 166
           + LD  ++I    V P  D  + L+   +I   +R +   +  E+   +   R+      
Sbjct: 117 VILDG-RDIGT-VVFPNADLKVYLNADPEIRAERRCKELRNKGENVEYEEILREITKRDY 174

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQK 214
             +H K  +  L IA +      I+DS + S + +   I  +V E  +K
Sbjct: 175 NDMHRK--ESPLKIAEDA----VILDSTSLSAEEIKDKIKKLVEEKTKK 217


>gi|153832401|ref|ZP_01985068.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|148871430|gb|EDL70293.1| conserved hypothetical protein [Vibrio harveyi HY01]
          Length = 129

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M +   I   G+ G+GKTT    L + L+ K+++  +  E 
Sbjct: 1  MPNAKLILIRGLPGSGKTTLAKKLSKQLKAKHFEADMYFEN 41


>gi|134045133|ref|YP_001096619.1| seryl-tRNA(Sec) kinase [Methanococcus maripaludis C5]
 gi|132662758|gb|ABO34404.1| seryl-tRNA(Sec) kinase [Methanococcus maripaludis C5]
          Length = 255

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 30/163 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+   GK+T    + + +  KN D  +               ++         +
Sbjct: 1   MLIILTGLPSVGKSTFSKAISKKMAEKNIDNII-----------LGTDLIRESFPVWKES 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E I       D    +I+ AL     ++ D   D++Y Y  +R       ++   E  
Sbjct: 50  YEEFI------RDSNNYLIKEALGNNFSVIVD---DTNY-YNSKRR----DLMNIANEFD 95

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKD 166
              V    TI L  P+D+ LKR   R     +  + + +E+ D
Sbjct: 96  SNYV----TIYLKAPLDLLLKRNIERGQKIPNEVIKNMYEKFD 134


>gi|323143554|ref|ZP_08078231.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT
          12066]
 gi|322416617|gb|EFY07274.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT
          12066]
          Length = 587

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G  IS  G +G+GKTT + LL   L+
Sbjct: 32 GNLISITGPDGSGKTTLLKLLAGNLK 57


>gi|260833138|ref|XP_002611514.1| hypothetical protein BRAFLDRAFT_63851 [Branchiostoma floridae]
 gi|229296885|gb|EEN67524.1| hypothetical protein BRAFLDRAFT_63851 [Branchiostoma floridae]
          Length = 1503

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T   LL+  L + N  V   T  P   P     R  LL     +    
Sbjct: 1047 VVIVGPSGSGKSTLWRLLRSALSKMNKTVKQYTMNPKAMP-----RTQLLGYIDIDTREW 1101

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++ ++ARL     V++        ++CD                   +++SL  +
Sbjct: 1102 SDGVLTSSARL-----VVKEPQDIQSWIVCD-------------GDIDPEWIESLNSV 1141


>gi|254386364|ref|ZP_05001670.1| deoxynucleoside kinase protein [Streptomyces sp. Mg1]
 gi|194345215|gb|EDX26181.1| deoxynucleoside kinase protein [Streptomyces sp. Mg1]
          Length = 218

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 71/234 (30%), Gaps = 56/234 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKT+   L+ + L     +V         P       +  +   +E  A+    +   
Sbjct: 9   GIGKTSVAELIAKEL---GSEVFFES-VEDNPILP----LFYTASPEEIQAKRYPFLLQL 60

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGERDSSQHLFLD 118
             L      I+ A      +L DR +                SS   Q   +      + 
Sbjct: 61  YFLQTRFASIKDAYHRADNVL-DRSIYEDWYFAKVNHDLGRISSLEMQVY-EGLLGEMMR 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            ++ +  ++  PD  + L    +  + R+  R           FE+ + ++     + + 
Sbjct: 119 EIEGLPYRK-APDLMVYLKADFETVMYRIGLRGRD--------FEQDEALV-----EYYR 164

Query: 179 DIARNQPDRCH---------IVDSAHS-----FQS---VATNILNIVWELVQKR 215
            +     D  H         ++D   +      +    VA  + + +  +  +R
Sbjct: 165 TLWSGYDDWVHKHYSASDVLVIDMNRTDVVNNPEDAARVAQEVKDALAAVAARR 218


>gi|118478481|ref|YP_895632.1| uridine kinase [Bacillus thuringiensis str. Al Hakam]
 gi|196042741|ref|ZP_03109980.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB108]
 gi|225865124|ref|YP_002750502.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB102]
 gi|229185392|ref|ZP_04312575.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BGSC 6E1]
 gi|118417706|gb|ABK86125.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|196026225|gb|EDX64893.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB108]
 gi|225786994|gb|ACO27211.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB102]
 gi|228598125|gb|EEK55762.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BGSC 6E1]
          Length = 218

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 17/191 (8%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +   +   T     +        +  +   +   
Sbjct: 19  IVI-GISGHGAAGKTTFANRLVNLLNQNEINYINTDPYIVSSDIRKYAVIQYTYQNENHR 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  A   AA  L  +E  I+  +  G     D +   ++ Y      S    +  ++ +
Sbjct: 78  YKMTACHPAAHHLAALERDIQ-MVRAG----LDFYTIDTH-YMKSELISSKNKITIVEGM 131

Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S   + P   D  I      +  L R  +R      A ++Y  +     HE+RR  +   
Sbjct: 132 SAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGADINYLSQS----HEERRIQYEVF 187

Query: 181 ARNQPDRCHIV 191
             +   R  I+
Sbjct: 188 MHSYSQRFDII 198


>gi|307594532|ref|YP_003900849.1| thymidylate kinase-like protein [Vulcanisaeta distributa DSM
          14429]
 gi|307549733|gb|ADN49798.1| thymidylate kinase-like protein [Vulcanisaeta distributa DSM
          14429]
          Length = 205

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
          I   G +G+GK+T   LL ++L R +Y            A+  AR + L   +    
Sbjct: 6  ICLFGPDGSGKSTLARLLAQYLARGDYVRISWVRGSHMAASLLARFLALFPSMRGVD 62


>gi|222480323|ref|YP_002566560.1| adenylate kinase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453225|gb|ACM57490.1| adenylate kinase [Halorubrum lacusprofundi ATCC 49239]
          Length = 207

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 72/234 (30%), Gaps = 61/234 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + L        YDV            +A R        +     +
Sbjct: 5   ILLLGAPGAGKGTQSAKLADE-----YDVEHV------TTGDALRAN-KDMETEYGTPRS 52

Query: 67  EAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 A  L     V  +++ AL +      D F+   Y     R+  Q  +L  + ++
Sbjct: 53  ---FMEAGELVPDPVVNEIVKAALAD-----ADGFVLDGY----PRNLDQAEYLSEITDL 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDY---------------FERK 165
                  D  I LD+  ++ + R+  R    +      +D+                 ++
Sbjct: 101 -------DAVIFLDVDEEVLVDRLTGRRVCDDCGANFHVDFQPPEEAGVCDECGGELIQR 153

Query: 166 DVMIHEKRRQIFLDIARN-QP--DRC------HIVDSAHSFQSVATNILNIVWE 210
           D    E  R+       N +P  D          VD   +   V   I +++ E
Sbjct: 154 DDDTEETARERLEVFYENTEPVIDHFRDEGDLVEVDGEATPDEVFERIRDVLDE 207


>gi|20095049|ref|NP_614896.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
 gi|19888325|gb|AAM02826.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19]
          Length = 349

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 32/139 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARH------VLLSC 57
           +F+   G+ G+GKTT I+ + + L+   Y V +   +     A E          V L  
Sbjct: 154 MFV---GVNGSGKTTTIAKVAKLLKDHGYSVVIAAADTFRAAAIEQLEEHAERLGVTLIK 210

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLF 116
           G       A A            N ++ A  +GK ++L D            R  +    
Sbjct: 211 GERGDDPTAVAF-----------NAVQHAEAKGKDVVLVD---------TAGRAYTDVNL 250

Query: 117 LDSLQEISVQEVMPDCTII 135
           ++ L+++  + + PD  + 
Sbjct: 251 MEELKKM-KRVLEPDLVVF 268


>gi|255636174|gb|ACU18429.1| unknown [Glycine max]
          Length = 183

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 38/150 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  K                +  R         +
Sbjct: 28  QKGCVIWLTGLSGSGKSTIACALSRSLHSKGK-------LSYILDGDNIR----HGLNQD 76

Query: 62  FGAEAEAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119
               AE       R +++  +   A L     ++C   + S  + YQ +RD         
Sbjct: 77  LSFRAE------DRSENIRRIGEVAKLFADAGVIC---ITSLISPYQKDRD--------- 118

Query: 120 LQEISVQEVMP--DCT-IILDLPVDIGLKR 146
               + + +MP  D   + +D+P+ +   R
Sbjct: 119 ----ACRALMPKGDFIEVFIDVPLHVCEAR 144


>gi|239825599|ref|YP_002948223.1| deoxynucleoside kinase [Geobacillus sp. WCH70]
 gi|239805892|gb|ACS22957.1| deoxynucleoside kinase [Geobacillus sp. WCH70]
          Length = 222

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 67/226 (29%), Gaps = 46/226 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L  +      + E   T          L    D F   +
Sbjct: 15  ITIAGTVGVGKSTMTKALAKALNFR-----TSFEKVDTNP-------YLDKFYDNFERWS 62

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123
             +   F A R        +     G   + DR +    A+   +   ++  + ++  E 
Sbjct: 63  FHLQIYFLAERF----KEQKRMFEYGGGFVQDRSIYED-AHIFAKMHFENGTMTAVDYET 117

Query: 124 SVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
                           PD  I L+   +  +KR++ R    E        +  +   ++ 
Sbjct: 118 YTSLFQAMVMTPYFPHPDLLIYLEGSFEEVMKRIRERGRPMEQ-------KTPISYWKEM 170

Query: 174 RQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWE 210
            + +                 +   IV+   S + +      I+ E
Sbjct: 171 YERYEKWINEFNACPVLRVNINEYDIVEDEQSIEPIIKKASTIIHE 216


>gi|154151418|ref|YP_001405036.1| signal recognition particle-docking protein FtsY [Candidatus
           Methanoregula boonei 6A8]
 gi|153999970|gb|ABS56393.1| signal recognition particle-docking protein FtsY [Methanoregula
           boonei 6A8]
          Length = 344

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT ++ +  +L+++ + V +    G T  A A   +      +  G + 
Sbjct: 149 ILFTGVNGTGKTTTVAKIGAYLKKEGFSVVI--GAGDTFRAGAIEQI--GVHAERLGIKV 204

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + ++ A+     ++L D            R  ++   +  L++I  
Sbjct: 205 IEHQTGADPSAVLFDTVQYAIAHKTDVVLAD---------TAGRFHTKANLMSQLEKI-R 254

Query: 126 QEVMPDCTIILD 137
           + + PD  + +D
Sbjct: 255 RVMKPDLIVYVD 266


>gi|37595845|ref|NP_932224.1| putative conjugative transfer protein TraD [Vibrio vulnificus
           YJ016]
 gi|37201928|dbj|BAC97747.1| putative conjugative transfer protein TraD [Vibrio vulnificus
           YJ016]
          Length = 705

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 5/128 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-G 63
           I  +G  GAGK+  +  L R+++++     V  +     +   + ++ +LL+   +    
Sbjct: 205 ILIDGTTGAGKSVMLRKLLRWIRKRGDKAIVYDKGCTFTSKFFDPSQDILLNPFDERCAN 264

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            +       A   +++ N + P   EG    +   R + SS AY+  +D+        L 
Sbjct: 265 WDVWCDAKEAPDFENIANALIPQHGEGDPFWVDSARTIFSSTAYRMSQDNKPCSTARLLS 324

Query: 122 EISVQEVM 129
            I   E+ 
Sbjct: 325 LILTSELE 332


>gi|315271322|gb|ACO47353.2| putative guanylate kinase (GMP kinase) [Deinococcus deserti VCD115]
          Length = 237

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 46/212 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTRE--PGGTPAAEAARHVLLSC 57
            GL I   G  G GK T   L   +L+ ++        TRE  PG     +     + + 
Sbjct: 16  RGLLIVMTGASGVGKGTLREL---WLRDQDVFYSTSWTTREARPGEVDGVDYI--FVSAD 70

Query: 58  GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             ++   +   +  A+   +H       I  AL  G+ ++ +  ++   A Q        
Sbjct: 71  AFEQKVQQGGFLEHASFVGNHYGTPVEPIEAALSRGQDVILE--IEVEGAMQVRDRMGDE 128

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                               I  +P    L  ++ R   R +   +  E++      + R
Sbjct: 129 AI---------------LVFI--MPP--SLTELRRRLEGRATETPERIEKR----LARAR 165

Query: 175 QIFLDIARNQPDRCHIVD-----SAHSFQSVA 201
           +   +I      R  IV+     +    ++V 
Sbjct: 166 E---EIMHAHAFRYVIVNDDLNRAVQELEAVQ 194


>gi|295135565|ref|YP_003586241.1| HPPK and dNK domain-containing protein [Zunongwangia profunda
           SM-A87]
 gi|294983580|gb|ADF54045.1| HPPK and dNK domain-containing protein [Zunongwangia profunda
           SM-A87]
          Length = 375

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 12/154 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  +++ +    K         P      E             F  E
Sbjct: 181 YIAVEGNIGAGKTSFSTMISQDFNAKLILERFKDNPFLPKFYE-------DQERYAFSLE 233

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123
                F A R   + + +    +    ++ D  +  S  +           L       +
Sbjct: 234 MS---FLADRYQQLSDDLAQYDLFKDFVISDYDVFKSLIFAKITLEEDEYSLYQKLFHLM 290

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
             + V PD  I L    +  L+ ++ R    E  
Sbjct: 291 YKELVKPDLYIYLYQNTERLLQNIKKRGREYEQN 324


>gi|193652389|ref|XP_001951525.1| PREDICTED: hypothetical protein LOC100165836 [Acyrthosiphon pisum]
          Length = 420

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 2/99 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT  S L  F +   + V+   E      +   +   LS   DE     
Sbjct: 11  IVLTGGPCGGKTTGQSRLCTFFENLGWKVYRVPETANVLLSGGIKFSELS--DDEAHKFQ 68

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           E ++    ++++    +  +  +  +++CDR    + AY
Sbjct: 69  ENLLRCMLQIENTFFELGESCDQDCLIICDRGAMDAAAY 107


>gi|254296961|ref|ZP_04964414.1| adenylylsulfate kinase [Burkholderia pseudomallei 406e]
 gi|157807224|gb|EDO84394.1| adenylylsulfate kinase [Burkholderia pseudomallei 406e]
          Length = 204

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 18 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 60

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 61 SDADRMENIRRFAHVAKLFQREGYVVI 87


>gi|9625976|ref|NP_040223.1| thymidine kinase [Saimiriine herpesvirus 2]
 gi|125448|sp|P21293|KITH_SHV21 RecName: Full=Thymidine kinase
 gi|66706|pir||KIBEHS thymidine kinase (EC 2.7.1.21) - saimiriine herpesvirus 1  (strain
           11[Onc])
 gi|60341|emb|CAA45643.1| thymidine kinase [Saimiriine herpesvirus 2]
 gi|221856|dbj|BAA00432.1| thymidine kinase [Saimiriine herpesvirus 2]
          Length = 527

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 56/173 (32%), Gaps = 23/173 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58
            FI  EG  G GKTT +  +   L     +V    EP          + E    + L   
Sbjct: 210 FFIFLEGSIGVGKTTLLKSMNGIL--GGKNVLAFHEPIAYWTDVFSNSLEEVYKLTLPAK 267

Query: 59  VDEFGAEAEA----------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA---Y 105
           V      A+           ++      D + +     L     ++ DR   S+     Y
Sbjct: 268 VGRTSNSAKLLACQLKFASPLLALKTATDRLSSPKNSLLSSDMWVMFDRHPLSATVVFPY 327

Query: 106 QGERDS-SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
              ++       L  L   S +    D  I+L+L     LKRV+ R    E +
Sbjct: 328 MHFQNGFLSFSHLIQLWS-SFKASRGDNIILLNLNSQENLKRVKKRNRKEEKS 379


>gi|88854661|ref|ZP_01129327.1| adenylate kinase [marine actinobacterium PHSC20C1]
 gi|88815822|gb|EAR25678.1| adenylate kinase [marine actinobacterium PHSC20C1]
          Length = 199

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 77/218 (35%), Gaps = 38/218 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L I   G  GAGK T  + L             T         +  R  + +    
Sbjct: 1   MTRLLLI---GPPGAGKGTQAARLAEIY---GIPAIST--------GDIFRSNVKNG--T 44

Query: 61  EFGAEAEAIVFAAARL-DHVEN-VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           E G +A+A + A   + D + N +IR  L E      D FL   Y     R + Q   LD
Sbjct: 45  ELGTKAKAFMDAGDNVPDSLTNALIRDRLEEDDA--QDGFLLDGY----PRTTDQVRELD 98

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           S   ++      D  + L+   ++ + R++ R    E    D  + + V+ H    +++ 
Sbjct: 99  SF--LASHGAALDAVVELEADPEVVISRLRKR--ALEQGRSD--DTEAVVRHR--LEVYS 150

Query: 179 D----IARNQPDR--CHIVDSAHSFQSVATNILNIVWE 210
           +    +      R     +D+     +V   I   + E
Sbjct: 151 EQTAPLINVYASRDVLVTIDALGEIDAVTARITEALVE 188


>gi|116493175|ref|YP_804910.1| deoxynucleoside kinase [Pediococcus pentosaceus ATCC 25745]
 gi|116103325|gb|ABJ68468.1| Deoxynucleoside kinase [Pediococcus pentosaceus ATCC 25745]
          Length = 210

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 80/229 (34%), Gaps = 40/229 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I+  G  GAGKTT   LL                      ++A    +    +       
Sbjct: 2   IALSGPIGAGKTTLTELLTSH-----------------WESDAYYESVDDNKILPLFYKD 44

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFL 117
            +  A +     L+   + I+ A  + + +  DR  + DS      A  G   +++    
Sbjct: 45  PKRYAFLLQIYFLNKRMDSIKQANSDARSV-MDRSIYEDSLLFHLNADLGRATNTEVDIY 103

Query: 118 DSLQEISVQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           DSL +  +QE+        PD  + +D+  D  LKR++ R    E    D         +
Sbjct: 104 DSLLKNMMQELPRLSYKKNPDLLVHIDISFDTMLKRIKKRGRSFEQIENDP---SLYEYY 160

Query: 171 EKRRQIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVS 217
            +  + ++    N      I +D    +  V        V +L+ ++++
Sbjct: 161 HELNKRYVAWFDNYDQSAKIKIDGDK-YDFVENPEARQKVIQLIDEKIA 208


>gi|300214188|gb|ADJ78604.1| ATPases of the AAA+ class [Lactobacillus salivarius CECT 5713]
          Length = 535

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62
           FEG  G GKTT   ++ R            V  T+  E  G    +      LS  ++E 
Sbjct: 315 FEGPPGTGKTTVARIVARLFYALGILENTTVVETKRNELEGKWVGD------LSGKINEK 368

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
              A   V        + N   P   +GK ++
Sbjct: 369 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 399


>gi|268566533|ref|XP_002647576.1| Hypothetical protein CBG06663 [Caenorhabditis briggsae]
          Length = 446

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 3/110 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L  F +   + V    E          +   L           
Sbjct: 53  IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDAEQSYIFQR- 111

Query: 67  EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             ++    ++++   N          +++CDR      AY  + D  + L
Sbjct: 112 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSQEDWQRML 160


>gi|67640790|ref|ZP_00439584.1| adenylyl-sulfate kinase [Burkholderia mallei GB8 horse 4]
 gi|121600462|ref|YP_993681.1| adenylylsulfate kinase [Burkholderia mallei SAVP1]
 gi|124384195|ref|YP_001028858.1| adenylylsulfate kinase [Burkholderia mallei NCTC 10229]
 gi|126440385|ref|YP_001059700.1| adenylylsulfate kinase [Burkholderia pseudomallei 668]
 gi|126449439|ref|YP_001081231.1| adenylylsulfate kinase [Burkholderia mallei NCTC 10247]
 gi|126454924|ref|YP_001066984.1| adenylylsulfate kinase [Burkholderia pseudomallei 1106a]
 gi|134277327|ref|ZP_01764042.1| adenylylsulfate kinase [Burkholderia pseudomallei 305]
 gi|167003824|ref|ZP_02269604.1| adenylyl-sulfate kinase [Burkholderia mallei PRL-20]
 gi|167739435|ref|ZP_02412209.1| adenylylsulfate kinase [Burkholderia pseudomallei 14]
 gi|167846550|ref|ZP_02472058.1| adenylylsulfate kinase [Burkholderia pseudomallei B7210]
 gi|167903516|ref|ZP_02490721.1| adenylylsulfate kinase [Burkholderia pseudomallei NCTC 13177]
 gi|217421228|ref|ZP_03452733.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 576]
 gi|242314505|ref|ZP_04813521.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1106b]
 gi|254178701|ref|ZP_04885356.1| adenylylsulfate kinase [Burkholderia mallei ATCC 10399]
 gi|254184300|ref|ZP_04890890.1| adenylylsulfate kinase [Burkholderia pseudomallei 1655]
 gi|254195909|ref|ZP_04902335.1| adenylylsulfate kinase [Burkholderia pseudomallei S13]
 gi|254199319|ref|ZP_04905685.1| adenylylsulfate kinase [Burkholderia mallei FMH]
 gi|254205632|ref|ZP_04911984.1| adenylylsulfate kinase [Burkholderia mallei JHU]
 gi|254258274|ref|ZP_04949328.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1710a]
 gi|254357788|ref|ZP_04974061.1| adenylylsulfate kinase [Burkholderia mallei 2002721280]
 gi|121229272|gb|ABM51790.1| adenylylsulfate kinase [Burkholderia mallei SAVP1]
 gi|124292215|gb|ABN01484.1| adenylyl-sulfate kinase [Burkholderia mallei NCTC 10229]
 gi|126219878|gb|ABN83384.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 668]
 gi|126228566|gb|ABN92106.1| adenylylsulfate kinase [Burkholderia pseudomallei 1106a]
 gi|126242309|gb|ABO05402.1| adenylyl-sulfate kinase [Burkholderia mallei NCTC 10247]
 gi|134250977|gb|EBA51056.1| adenylylsulfate kinase [Burkholderia pseudomallei 305]
 gi|147748915|gb|EDK55989.1| adenylylsulfate kinase [Burkholderia mallei FMH]
 gi|147753075|gb|EDK60140.1| adenylylsulfate kinase [Burkholderia mallei JHU]
 gi|148026915|gb|EDK84936.1| adenylylsulfate kinase [Burkholderia mallei 2002721280]
 gi|160699740|gb|EDP89710.1| adenylylsulfate kinase [Burkholderia mallei ATCC 10399]
 gi|169652654|gb|EDS85347.1| adenylylsulfate kinase [Burkholderia pseudomallei S13]
 gi|184214831|gb|EDU11874.1| adenylylsulfate kinase [Burkholderia pseudomallei 1655]
 gi|217396640|gb|EEC36657.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 576]
 gi|238521577|gb|EEP85027.1| adenylyl-sulfate kinase [Burkholderia mallei GB8 horse 4]
 gi|242137744|gb|EES24146.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1106b]
 gi|243060689|gb|EES42875.1| adenylyl-sulfate kinase [Burkholderia mallei PRL-20]
 gi|254216963|gb|EET06347.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1710a]
          Length = 206

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|313157223|gb|EFR56653.1| deoxynucleoside kinase [Alistipes sp. HGB5]
          Length = 218

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 25/161 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+  G  G+GKTT   +L +    K+Y      E       +    +       +   
Sbjct: 15  MYIAIAGNIGSGKTTLTQILTKRYNAKSY----LEECNNPYIGDFYEDMNRWSFNLQM-- 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG--KILLCDR--FLDS-----SYAYQGERDSSQHL 115
                 F  +R+          L +G   ++  DR  + D+     +    G   +    
Sbjct: 69  -----YFLGSRIQQT----MDMLSDGGSGVIFQDRTVYEDAHIFAGNLHEMGLMPTRDIE 119

Query: 116 FLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRE 155
               +  +  + +  PD  I L   V   + +++ R    E
Sbjct: 120 TYMKIFRLVTELIPKPDLLIYLKASVPTLISQIRKRGREYE 160


>gi|288923975|ref|ZP_06418047.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f]
 gi|288344680|gb|EFC79137.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f]
          Length = 640

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 34/144 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  + +  +                 LL       G   + 
Sbjct: 468 FTGLSGAGKSTIANLVEKRLHDQGHHTY-----------------LLDGDNIRHGLNKDL 510

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++  +   A      G I+L      S  +            LD  + +  
Sbjct: 511 GFTDADRVENIRRIAEVARLMADAGLIVLT-----SFISPFRAERQLARDLLDDGEFVE- 564

Query: 126 QEVMPDCTIILDLPVDIGLKRVQN 149
                   + +D P+D+   R + 
Sbjct: 565 --------VFVDTPLDVAETRDRK 580


>gi|256843094|ref|ZP_05548582.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256850255|ref|ZP_05555684.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262046352|ref|ZP_06019314.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|312977279|ref|ZP_07789027.1| putative kinase [Lactobacillus crispatus CTV-05]
 gi|256614514|gb|EEU19715.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256712892|gb|EEU27884.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260573223|gb|EEX29781.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|310895710|gb|EFQ44776.1| putative kinase [Lactobacillus crispatus CTV-05]
          Length = 166

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 43/152 (28%), Gaps = 33/152 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S   I   G  G+GKTT    + R L      +     P  T   E     +      
Sbjct: 1   MTS-KLIIIRGNSGSGKTTLSKEIHRRLPHNTLLI-----PQDTVRREMLN--VKDGEKT 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++       H    I   ++  K             Y      SQ LF D +
Sbjct: 53  FALPLLENLLEYGYH--HCSYTILEGILNAKW------------YADLFKKSQQLFGDQI 98

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
                           D+P +  +KR + R+ 
Sbjct: 99  YAY-----------YFDIPFEETMKRHKTRHE 119


>gi|123433828|ref|XP_001308688.1| Dynein heavy chain family protein [Trichomonas vaginalis G3]
 gi|121890380|gb|EAX95758.1| Dynein heavy chain family protein [Trichomonas vaginalis G3]
          Length = 2829

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 26/118 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  G GKTT  +LL++ L +    V      P   P     R  LL     +    
Sbjct: 570 VVLTGPSGCGKTTLWTLLQKTLDKIGVKVDIEVMNPKSMP-----RQRLLGRVDYDTREW 624

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + ++  AAR          A      ++CD                   +++SL  +
Sbjct: 625 FDGVLTRAARRA-------VASSNRTWIVCD-------------GDIDPEWIESLNSV 662


>gi|323978940|gb|EGB74020.1| ATP-binding protein YghR [Escherichia coli TW10509]
          Length = 252

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRFPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMVNLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
            Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193


>gi|300726987|ref|ZP_07060407.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella
           bryantii B14]
 gi|299775710|gb|EFI72300.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella
           bryantii B14]
          Length = 209

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 44/187 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLS---CGVDEF 62
           I   G  G+GKTT   LL +               G TP  E+   +  LS     +  +
Sbjct: 3   IVIAGNIGSGKTTLTKLLAQH-------------YGWTPRFESVENNPYLSDYYKDIPRW 49

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD----------SSYAYQGERDSS 112
               E         D +           K ++ DR +               +  +RD  
Sbjct: 50  SFNMEIFFLKQRFRDLLA-----INRSDKTIVQDRSIYEGVHVFATTNKEMGHMSDRDFE 104

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------DYFER 164
            ++ L   + + +    PD  I L   V   +  ++ R    E A          D +E 
Sbjct: 105 TYIGL--FESMMMIAKQPDLMIYLRASVPHLVANIEKRGRDYEQAMPLEYLQNLNDRYE- 161

Query: 165 KDVMIHE 171
            D + H+
Sbjct: 162 -DFVFHK 167


>gi|301101074|ref|XP_002899626.1| dynein heavy chain [Phytophthora infestans T30-4]
 gi|262103934|gb|EEY61986.1| dynein heavy chain [Phytophthora infestans T30-4]
          Length = 4373

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 24/114 (21%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
            G  G+GK+T   +L++ L +    V      P   P     R  LL     +     + +
Sbjct: 2044 GPSGSGKSTVWLVLQQALIKCGQLVKTHVMNPKSMP-----RERLLGHMDLDTREWEDGV 2098

Query: 70   VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + AAAR      V++        ++CD                   +++SL  +
Sbjct: 2099 LTAAAR-----QVVKEPENVRSWIICD-------------GDVDPEWIESLNSV 2134


>gi|241895639|ref|ZP_04782935.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313]
 gi|241871217|gb|EER74968.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313]
          Length = 212

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 48/227 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT   L+ + L+ +        EP      E     L      ++G   +      
Sbjct: 10  GVGKTTLTDLIAKHLKTQ-----AFFEP----VGENPVLPLYYADPKQYGFLLQIYFLNK 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
                   +I+ AL +   +L DR  + D+ +  +  R+                  +D 
Sbjct: 61  RFA-----MIKKALSDDNNVL-DRSIYEDALFTQENHREGNISDAELNVYMTLLKNMMDE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +Q +      PD  +  D   D  L R++ R    E      FE    +     RQ +  
Sbjct: 115 IQTMKKG--RPDLMVFADADFDTILYRIKKRGRDYEQ-----FEDNADL-----RQYYFK 162

Query: 180 IARNQPDRCHIVDSA-------HSFQSVATNILNIVWELVQKRVSPL 219
           +           D++         +     +   IV + +  R+  L
Sbjct: 163 MWSAYQKWYADYDASPKMKIDLQKYDLENKDSQKIVLQQIDDRLKEL 209


>gi|167720441|ref|ZP_02403677.1| adenylylsulfate kinase [Burkholderia pseudomallei DM98]
          Length = 193

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|289741607|gb|ADD19551.1| guanylate kinase [Glossina morsitans morsitans]
          Length = 216

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 49/218 (22%)

Query: 11  GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GKTT ++ L K F     + V H TR+P          + +    + +  A  E 
Sbjct: 26  GPSGSGKTTLLNRLFKEFPNTFGFSVSHTTRKPRPAEQDGVHYNFVEKDVMKKMIANGEF 85

Query: 69  I---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           I    F+       +  +R     GK+ + D                +   ++ +++  +
Sbjct: 86  IESATFSGNMYGTSKEAVRKIQAAGKVCILD---------------IEPQGVEQIKKTDL 130

Query: 126 QEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             ++    I  + P   +   KR++ R +  E    +                 L  AR 
Sbjct: 131 NPIL----IY-NNPPSIEALEKRLRKRNTESEETLNNR----------------LAAARE 169

Query: 184 Q------PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +      P   H + +         +  + +   ++ +
Sbjct: 170 EIAYGLTPGNFHKIINNIDIDEAYEDFRSYLLAELKAQ 207


>gi|188584857|ref|YP_001916402.1| Adenylate kinase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229487586|sp|B2A4G2|KAD_NATTJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|179349544|gb|ACB83814.1| Adenylate kinase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 214

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 60/236 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    L + L     DV            +  R  +      E G EA
Sbjct: 3   IILMGPPGAGKGTQAEKLSKEL-----DV------PHIATGDIFRKAV--SEGTELGKEA 49

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++ + A   +  D V  ++   L +               ++G         +   +  +
Sbjct: 50  KSYMDAGQLVPDDVVIGIVEERLKKPD------------CHEGFILDGFPRTVTQAE--A 95

Query: 125 VQEVMPD--CT--IILDLPVDIGLKRVQNRYSLRESACLDYF------------ERKDVM 168
           + +V+ D   T  + +D+  D  + R+  R   R+     +             E +  +
Sbjct: 96  LDKVLSDNPLTAAVYIDVSKDELIDRLSGRRICRKCGKSYHIKFNPPQVRGVCDEDEGEL 155

Query: 169 IHE--------KRR-QIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209
                      K R +++L+    +     DR     +D   S + V  +IL  V 
Sbjct: 156 YQRDDDNEETAKERLEVYLENTQPLVEYYQDRGILKKIDGTKSPEEVFRDILKAVQ 211


>gi|57525607|ref|NP_001003633.1| GPN-loop GTPase 1 [Danio rerio]
 gi|50417230|gb|AAH78195.1| Zgc:100927 [Danio rerio]
          Length = 349

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 11/94 (11%)

Query: 14 GAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGVDEF 62
          G+GKTT +  L  +L  K            VH    P      +    + V+   G+   
Sbjct: 3  GSGKTTFVQRLTAYLHSKKTPPYVINLDPAVHEVPFPANIDIRDTVNYKEVMKQYGLGPN 62

Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
          G    ++   A R D V   I       + +L D
Sbjct: 63 GGIVTSLNLFATRFDQVMKFIEKKQSNHEYVLID 96


>gi|260060603|ref|YP_003193683.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Robiginitalea
           biformata HTCC2501]
 gi|88784733|gb|EAR15902.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Robiginitalea
           biformata HTCC2501]
          Length = 385

 Score = 40.8 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 60/190 (31%), Gaps = 20/190 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKTT    +       N  + + R        +  +         E    
Sbjct: 181 YIAIEGNIGAGKTTLAGKIAE---DMNAKLILERFADNPFLPKFYQDQARYAFPLEMS-- 235

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124
                F A R        R   +  + ++ D  +  S  +           L   L  + 
Sbjct: 236 -----FLAERYQQFTEDTRQLDLFKRFMVSDYDIYKSLIFARITLQEDEFLLYRKLFTLM 290

Query: 125 VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            QEV  P   + L    D  L+++ NR    E               EK  + + D  RN
Sbjct: 291 YQEVRKPRLYVYLYQHTDRLLRQIANRGRDYERGIP-------AEYLEKIHRGYFDFMRN 343

Query: 184 QPD-RCHIVD 192
            P+    ++D
Sbjct: 344 SPELNTLVID 353


>gi|313676872|ref|YP_004054868.1| deoxynucleoside kinase [Marivirga tractuosa DSM 4126]
 gi|312943570|gb|ADR22760.1| deoxynucleoside kinase [Marivirga tractuosa DSM 4126]
          Length = 211

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 60/202 (29%), Gaps = 38/202 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT  + L                   T       +  L     +    A
Sbjct: 7   IAIAGNIGAGKTTLANKLSHH------------YGWKTEFEAVEDNPYLVDFYKDMKQWA 54

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
             +   F  +RL  V+ +          ++ DR  + D     +   +S      D    
Sbjct: 55  FHLQVYFLNSRLQQVKRI----RESEHTVVQDRSIYEDCYVFAKNLHESGNMSDRDYHNY 110

Query: 123 ISVQEVM------PDCTIIL--DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + + + M      PD  I L  D+P  +G           E    DY E   +   +   
Sbjct: 111 LELFDSMAAVITPPDLLIYLRADIPKLVGQ---------IEKRGRDYEETIRIDYLKNLN 161

Query: 175 QIFLDIARNQP-DRCHIVDSAH 195
           + +    +     +  I+D   
Sbjct: 162 KHYEAWVKQYDIGKLIIIDVNQ 183


>gi|297568266|ref|YP_003689610.1| guanylate kinase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924181|gb|ADH84991.1| guanylate kinase [Desulfurivibrio alkaliphilus AHT2]
          Length = 203

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 54/180 (30%), Gaps = 31/180 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           MN G  +      GAGKTT +  +        + V H TR P          H +     
Sbjct: 1   MNKGCLLVVSAPSGAGKTTLLKRILADTPGIGFSVSHTTRAPRAGEENGVDYHFI---DR 57

Query: 60  DEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            EF    EA  F      H          ++ AL+ G+ +L D         QG R   +
Sbjct: 58  QEFTRRREADDFLEWAEVHGNFYGTSREAVQQALIRGEDILLD------IDVQGARQLKE 111

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              +++               +   P    +  +R+  R +          E     + E
Sbjct: 112 QTGVEA-------------VFLFIAPPSARVLAQRLHGRGTDSREVIELRLENARREMQE 158


>gi|227891816|ref|ZP_04009621.1| ATPase of the AAA+ class [Lactobacillus salivarius ATCC 11741]
 gi|227866381|gb|EEJ73802.1| ATPase of the AAA+ class [Lactobacillus salivarius ATCC 11741]
          Length = 535

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62
           FEG  G GKTT   ++ R            V  T+  E  G    +      LS  ++E 
Sbjct: 315 FEGPPGTGKTTVARIVARLFYALGILENTTVIETKRNELEGKWVGD------LSGKINEK 368

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
              A   V        + N   P   +GK ++
Sbjct: 369 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 399


>gi|118431358|ref|NP_147777.2| adenylyl-sulfate kinase [Aeropyrum pernix K1]
 gi|150421535|sp|Q9YCR6|CYSC_AERPE RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|116062682|dbj|BAA80181.2| adenylyl-sulfate kinase [Aeropyrum pernix K1]
          Length = 183

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ +   G+ G+GKTT  + L   LQ++ Y V V          + AR  +        
Sbjct: 9   KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVL-------DGDWARTTVSEGAGFT- 60

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSL 120
               E +      L  +  + R     G I++C     S Y  A    R   +   +  L
Sbjct: 61  --REERL----RHLKRIAWIARLLARNGVIVIC--SFVSPYKQARNMVRRIVEEEGIPFL 112

Query: 121 Q 121
           +
Sbjct: 113 E 113


>gi|109947541|ref|YP_664769.1| guanylate kinase [Helicobacter acinonychis str. Sheeba]
 gi|109714762|emb|CAJ99770.1| gmk [Helicobacter acinonychis str. Sheeba]
          Length = 200

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
          + I   G  GAGK+T    L+  +Q+  + +   TR+P      +   +  +S    + G
Sbjct: 1  MLI-LSGPSGAGKSTLTKYLQEKIQKTYFSLSTTTRKPREGEI-DGLHYNFVSEEEFKQG 58

Query: 64 AEAEAIVFAAARLDHV----ENVIRPALMEGKILLCD 96
           E    +  A   +H     + ++  AL EGKI++ D
Sbjct: 59 IEKGQFLEWAIVHNHYYGTSKALVEKALKEGKIVIFD 95


>gi|311993359|ref|YP_004010224.1| hypothetical protein Acj9p087 [Acinetobacter phage Acj9]
 gi|295917316|gb|ADG59987.1| conserved hypothetical phage protein [Acinetobacter phage Acj9]
          Length = 182

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 23/112 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  EG + +GKTT I  L            +   PG        R+            
Sbjct: 3   RLIVVEGPDNSGKTTFIQHL------------LNNFPGTEVIQFPKRNT--DKTRFNIIT 48

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +  +F           +   L + K+ + DR   S+  Y+  R  S+   
Sbjct: 49  RNDLAIF---------ETMLDYLPQDKVFILDRSYISNAVYERLRGDSKWPM 91


>gi|254467765|ref|ZP_05081172.1| Uma3 [Rhodobacterales bacterium Y4I]
 gi|206684202|gb|EDZ44688.1| Uma3 [Rhodobacterales bacterium Y4I]
          Length = 508

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 21/149 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             ++  G+ G GKTT  + +   L+     VH+         ++  R  LL     E   
Sbjct: 334 RLVAVGGLSGTGKTTVAARVAPLLRPAPGAVHL--------RSDVERKALLGAAPLERLP 385

Query: 65  EAEAIVFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            A       AR+   +      AL  G  ++ D                +  F D +Q +
Sbjct: 386 AAGYGPEVTARVYARLLERAEQALRAGHSVILD------------ATFLEAEFRDRVQAL 433

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           + +  +P   I L     +  +R+  R  
Sbjct: 434 ADRLRVPFAGIWLQGDPAVLEQRIAARRG 462


>gi|315230023|ref|YP_004070459.1| signal recognition particle [Thermococcus barophilus MP]
 gi|315183051|gb|ADT83236.1| signal recognition particle [Thermococcus barophilus MP]
          Length = 448

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 17/127 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           GI+G+GKTT ++ L R+ Q++ Y V +       P A    + ++    ++ FG   E  
Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGLVCSDTWRPGAYHQLKQLVEPYSIEVFGDPNE-- 164

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 +   +  +     +G  I++ D            R   +   ++ +++I    +
Sbjct: 165 ---KDAVRLAKEGVEYFKHKGVDIIIVD---------SAGRHKEEKSLIEEMKQI-SDAI 211

Query: 129 MPDCTII 135
            P   I+
Sbjct: 212 NPHEVIL 218


>gi|118587102|ref|ZP_01544532.1| ABC transporter, ATP-binding protein [Oenococcus oeni ATCC
           BAA-1163]
 gi|118432512|gb|EAV39248.1| ABC transporter, ATP-binding protein [Oenococcus oeni ATCC
           BAA-1163]
          Length = 295

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N+G  ++F G  GAGK+T I +L   L+     + V  E       +    V     +D+
Sbjct: 28  NAGSLVAFLGPNGAGKSTTIKMLTTILRPSGGKILVDGEESPEAIRKNIGIVFQESILDK 87

Query: 62  FGAEAEAIVFAAARLDHVENV 82
                E ++F +     +   
Sbjct: 88  ELTVRENLLFRSNLYQRLPKK 108


>gi|323339737|ref|ZP_08080007.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644]
 gi|323092816|gb|EFZ35418.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644]
          Length = 242

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 37/213 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60
           I+  GI G+GK++   +L R L    +      +  +     G   A   R        D
Sbjct: 2   ITLAGIIGSGKSSLTEILSRELGSIPFYEPVEDNPVLPLFYKGNELAAKKRQA---GEKD 58

Query: 61  EFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQG 107
                A  +   F   R   ++  ++         + DR  + D+ +         A Q 
Sbjct: 59  ATNPYAYLLQTFFLNRRFMMMKKALQSRNN-----ILDRSIYEDAMFMRMNTEMGNATQV 113

Query: 108 ERDSSQHLFLDSLQEISVQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           E    Q L  + L+E++   V+P    +  I++ +  D  + R++ R    E    D   
Sbjct: 114 EYSIYQELLTNILEELNH--VVPSNDYNLMILIKVSYDTMVSRIKKRGREYEQIEKDP-- 169

Query: 164 RKDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH 195
              +  + +  + + +   N       ++D   
Sbjct: 170 -SLIDYYGRLLKYYEEFEENYNQSEMLVIDGDK 201


>gi|161528039|ref|YP_001581865.1| GTP-binding signal recognition particle [Nitrosopumilus maritimus
           SCM1]
 gi|160339340|gb|ABX12427.1| GTP-binding signal recognition particle SRP54 G- domain
           [Nitrosopumilus maritimus SCM1]
          Length = 442

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           I   GI+G+GKTT  S L +FL  + Y V V       P A
Sbjct: 102 IILLGIQGSGKTTVASKLAKFLTGQGYKVGVVGADTYRPGA 142


>gi|15615947|ref|NP_244251.1| adenylylsulfate kinase [Bacillus halodurans C-125]
 gi|12230018|sp|Q9K7H6|CYSC2_BACHD RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|10176008|dbj|BAB07104.1| adenylylsulfate kinase [Bacillus halodurans C-125]
          Length = 208

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +    I F G+ G+GK+T  + ++  L ++   V+                 +L      
Sbjct: 29  HKSRMIWFTGLSGSGKSTIANAVQAELFKRGIQVY-----------------VLDGDNLR 71

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G  A+       R +++     V +  +  G ++L 
Sbjct: 72  HGLNADLSFSMEDRKENIRRTAEVGKLFVDAGLVVLA 108


>gi|67923558|ref|ZP_00517031.1| Adenylate kinase, subfamily [Crocosphaera watsonii WH 8501]
 gi|67854584|gb|EAM49870.1| Adenylate kinase, subfamily [Crocosphaera watsonii WH 8501]
          Length = 190

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 78/226 (34%), Gaps = 55/226 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55
           M++G  + F G  G+GK T    L + L   N     T         E  R  +     L
Sbjct: 1   MSTGKGLIFLGPPGSGKGTQAQELSKEL---NIPHIST--------GEMLRAAIAKQTSL 49

Query: 56  SCGVDEFGAEAEA----IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
                 +  + E     ++        +E  ++    E   +L D F          R+ 
Sbjct: 50  GQKAQVYMDKGELVPDELLLG-----LIEERLKEKDAENGWIL-DGF---------PRNV 94

Query: 112 SQHLFLDS-LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           +Q  FLD  L +++         I LD+P  + + R+  R   +E    D     +    
Sbjct: 95  AQAEFLDKLLHKLAKFSEQ---AINLDVPDPVIIDRLLLRGQ-KEGRKDD-----NEETI 145

Query: 171 EKRRQIFLDIARNQP--------DRCHIVDSAHSFQSVATNILNIV 208
            +R +++ +  + QP        DR   VD     Q V   +  +V
Sbjct: 146 RRRLEVYRE--KTQPVLDYYRQQDRLSSVDGNRELQEVTKTLKAVV 189


>gi|296087310|emb|CBI33684.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 28/145 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  +                +  R         +
Sbjct: 95  QKGCVIWITGLSGSGKSTLACALSRALHSRG-------NLTYVLDGDNVR----HGLNRD 143

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE       R +++  +   A +         F DS         S      D+ +
Sbjct: 144 LSFRAE------DRAENIRRIGEVAKL---------FSDSGIICIASLISPYRKDRDACR 188

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
            +  +       + +D+P+++  +R
Sbjct: 189 AMLSEGNF--IEVFMDIPLEVCEER 211


>gi|7330010|gb|AAF59999.1|AF210726_20 thymidine kinase [Rhesus monkey rhadinovirus H26-95]
          Length = 557

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLL 55
            +   I  EG+ G GKTT ++ +   + ++N  V    EP        +   +  R ++ 
Sbjct: 228 RNAFLIYLEGVMGVGKTTLLNSMTGMVPQEN--VLSCPEPMKFWTCVYSNCLKEQRSIVK 285

Query: 56  SCGVDEFGAEAEAI-------VFAAARLDHVENVIRPAL-MEGK-----ILLCDRFLDSS 102
                +    A          +   A    +   ++P L   G       ++ DR L S+
Sbjct: 286 QGTHGKSITSARVYACQSKFALPFRATAAGIGRNLQPWLVGNGSTKPANWIVFDRHLLSA 345

Query: 103 -----YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                  +      +       L   S  +   D  ++L L      +R+Q+R    E  
Sbjct: 346 TVVFPLVHVKYNRLTPDHLFQILSLFSAHDG--DVVVLLTLNSSEAHRRIQSRGRKEEKG 403

Query: 158 -CLDYFERKDVMIH 170
              +Y  +     H
Sbjct: 404 ITQNYLRQVAWAYH 417


>gi|46519363|gb|AAT00011.1| JM34 [Macaca fuscata rhadinovirus]
          Length = 556

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLL 55
            +   I  EG+ G GKTT ++ +   + ++N  V    EP        +   +  R ++ 
Sbjct: 227 RNAFLIYLEGVMGVGKTTLLNSMTGMVPQEN--VLSCPEPMKFWTCVYSNCLKEQRSIVK 284

Query: 56  SCGVDEFGAEAEAI-------VFAAARLDHVENVIRPAL-MEGK-----ILLCDRFLDSS 102
                +    A          +   A    +   ++P L   G       ++ DR L S+
Sbjct: 285 QGTHGKSITSARVYACQSKFALPFRATAAGIGRNLQPWLVGNGSTKPANWIVFDRHLLSA 344

Query: 103 -----YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
                  +      +       L   S  +   D  ++L L      +R+Q+R    E  
Sbjct: 345 TVVFPLVHVKYNRLTPDHLFQILSLFSAHDG--DVVVLLTLNSSEAHRRIQSRGRKEEKG 402

Query: 158 -CLDYFERKDVMIH 170
              +Y  +     H
Sbjct: 403 ITQNYLRQVAWAYH 416


>gi|116490777|ref|YP_810321.1| ABC-type multidrug transport system, ATPase component [Oenococcus
           oeni PSU-1]
 gi|290890207|ref|ZP_06553288.1| hypothetical protein AWRIB429_0678 [Oenococcus oeni AWRIB429]
 gi|116091502|gb|ABJ56656.1| ABC-type multidrug transport system, ATPase component [Oenococcus
           oeni PSU-1]
 gi|290480153|gb|EFD88796.1| hypothetical protein AWRIB429_0678 [Oenococcus oeni AWRIB429]
          Length = 295

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N+G  ++F G  GAGK+T I +L   L+     + V  E       +    V     +D+
Sbjct: 28  NAGSLVAFLGPNGAGKSTTIKMLTTILRPSGGKILVDGEESPEAIRKNIGIVFQESILDK 87

Query: 62  FGAEAEAIVFAAARLDHVENV 82
                E ++F +     +   
Sbjct: 88  ELTVRENLLFRSNLYQRLPKK 108


>gi|325474458|gb|EGC77645.1| cytidylate kinase/ribosomal protein S1 [Treponema denticola
          F0402]
          Length = 811

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G+GK+T   +L   L 
Sbjct: 1  MIIAIDGPAGSGKSTLAKMLAEHLN 25


>gi|311031369|ref|ZP_07709459.1| dephospho-CoA kinase [Bacillus sp. m3-13]
          Length = 200

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 56/224 (25%)

Query: 11  GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDE 61
           G+ G   +GK+T  ++L+     +   +       E G     E  +     +L+     
Sbjct: 6   GLTGGIASGKSTVANMLRDKNIPIVDADIVAREVVEIGTDTYKELVKEFGTEILNDDKTL 65

Query: 62  FGAEAEAIVFA-------AARLDH------VENVIRPALMEG-KILLCDRFLDSSYAYQG 107
              +  +I+F           + H      ++   +  L +G ++++ D           
Sbjct: 66  NRPKLGSIIFQDETKRQKLNNIMHPSIRTSMKEKTQKFLEDGHEVVVMD----------- 114

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  LF   L  +       D T+++ +     LKR+  R  L E    D   R  +
Sbjct: 115 ----IPLLFESKLTHLV------DKTLLVYVTEATQLKRLMERNDLSEKEATDRI-RSQM 163

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            + EK       ++        I+D+  S       +  I+ E 
Sbjct: 164 PLTEKV-----KLSHA------IIDNNGSVTKTEQQLNQILKEW 196


>gi|256545175|ref|ZP_05472541.1| guanylate kinase [Anaerococcus vaginalis ATCC 51170]
 gi|256399216|gb|EEU12827.1| guanylate kinase [Anaerococcus vaginalis ATCC 51170]
          Length = 198

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 4/98 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M  G  +   G  G GK T +  L    +   Y V   TR+         +         
Sbjct: 1  MKKGFLLVISGPSGVGKGTVLHDLMNTQKNLVYSVSVTTRKQRPGEIEGVSYFFKSHEEF 60

Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94
          ++   E + + +A    ++    ++ +   + EGKI++
Sbjct: 61 EKMIEEDKFLEYAKVHDNYYGTPKDFVEEKINEGKIVI 98


>gi|229116054|ref|ZP_04245447.1| uridine kinase [Bacillus cereus Rock1-3]
 gi|228667389|gb|EEL22838.1| uridine kinase [Bacillus cereus Rock1-3]
          Length = 196

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 35/212 (16%)

Query: 1   MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L      +           A+  + +      
Sbjct: 11  MNRKTIVITIAAVSGGGKTTITESLTHELTNS-KALFFDSYNFDNYPADICKWI-----D 64

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    +   +      + H+   IR + ++  I+      D  +AY              
Sbjct: 65  DGANYDEWVLTPLIHDIQHL---IRDSKLDYIIV------DYPFAY-------------- 101

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L     Q +  D TI +D P+DI + R   R    ++    + + K  M H   R+ +L+
Sbjct: 102 LNREMGQFI--DVTIFIDTPLDIAMARRILRDFKEDTMSEIHNDLKHYMAHA--RKAYLE 157

Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210
                +P+   ++D + S   +  +++  +  
Sbjct: 158 AIHTVKPNSDIVLDGSFSVSEIIDHVVEELDR 189


>gi|108798020|ref|YP_638217.1| adenylate kinase [Mycobacterium sp. MCS]
 gi|119867115|ref|YP_937067.1| adenylate kinase [Mycobacterium sp. KMS]
 gi|126433682|ref|YP_001069373.1| adenylate kinase [Mycobacterium sp. JLS]
 gi|123369667|sp|Q1BD73|KAD_MYCSS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|166980334|sp|A3PVF5|KAD_MYCSJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|166980335|sp|A1UBR9|KAD_MYCSK RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|108768439|gb|ABG07161.1| Adenylate kinase [Mycobacterium sp. MCS]
 gi|119693204|gb|ABL90277.1| Adenylate kinase [Mycobacterium sp. KMS]
 gi|126233482|gb|ABN96882.1| Adenylate kinase [Mycobacterium sp. JLS]
          Length = 181

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 65/215 (30%), Gaps = 51/215 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + L   L         T         +  R  +      E G EA
Sbjct: 3   IVLLGPPGAGKGTQAAKLADKL---GVPHIST--------GDLFRDNI--TNETELGVEA 49

Query: 67  EAIVFAAARL------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  + A   +        VE+ I     +   +L D +  S    Q E            
Sbjct: 50  KRYLDAGDLVPSSLTNALVEDRIDQDDAKNGFIL-DGYPRS--VEQAEALGDM------- 99

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYF-----ERKDVMIHEKR 173
             ++ + +  D  I   +  D  L R++ R    ++    L+       E   ++ H + 
Sbjct: 100 --LAARNLSLDAVIEFRVSEDELLSRLKGRGRADDTEEVILNRMKVYRDETAPLLDHYR- 156

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                ++          VD+  S   V    L  +
Sbjct: 157 ----AEL--------KTVDAVGSLDEVFARALQAL 179


>gi|114051493|ref|NP_001040302.1| guanylate kinase [Bombyx mori]
 gi|87248153|gb|ABD36129.1| guanylate kinase [Bombyx mori]
          Length = 207

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 43/214 (20%)

Query: 11  GIEGAGKTTHIS-LLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GK+T +  LLK F  +  + V H TR P    A E          +++     E 
Sbjct: 13  GPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAP---RAGEKNGVHYHFTNLNDMSTAIE- 68

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS----LQEIS 124
                         I  A+  G I     +  S  A    R + +   LD     +++I 
Sbjct: 69  ----------KGEFIETAIFSGNI-----YGTSKKAVDDVRRTGKICVLDIEMEGVKQIK 113

Query: 125 VQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDI 180
             ++ P    +  +P   D   +R++ R + +E +     E  R+++   +         
Sbjct: 114 RTDLDPLLVFV--MPPSIDELERRLRARNTEQEDSLKKRLETARREIKFGQ--------- 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              +P   +I+    +       + + + + ++ 
Sbjct: 163 ---EPGNFNIIILNDNLDKAYNELRDFITQNIED 193


>gi|42527583|ref|NP_972681.1| cytidylate kinase/ribosomal protein S1 [Treponema denticola ATCC
          35405]
 gi|41818168|gb|AAS12592.1| cytidylate kinase/ribosomal protein S1 [Treponema denticola ATCC
          35405]
          Length = 811

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G+GK+T   +L   L 
Sbjct: 1  MIIAIDGPAGSGKSTLAKMLAEHLN 25


>gi|304319969|ref|YP_003853612.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Parvularcula bermudensis HTCC2503]
 gi|303298872|gb|ADM08471.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Parvularcula bermudensis HTCC2503]
          Length = 637

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 34/149 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     + F G+ GAGK+T  +L+++ L  +    +                 +L     
Sbjct: 459 MQRPALLWFTGLSGAGKSTIANLVEKRLYDRGRHTY-----------------ILDGDNV 501

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             G   +     A R++++  V   A   +  G I+L         A+     + + +  
Sbjct: 502 RHGLNKDLGFTDADRVENIRRVAETAKLMVDAGLIVLS--------AFISPFRTERQMAR 553

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146
             L E    +      + +D P+++  +R
Sbjct: 554 SLLGE---GKF---IEVFIDTPLNVAEER 576


>gi|307354830|ref|YP_003895881.1| shikimate 5-dehydrogenase [Methanoplanus petrolearius DSM 11571]
 gi|307158063|gb|ADN37443.1| shikimate 5-dehydrogenase [Methanoplanus petrolearius DSM 11571]
          Length = 459

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 48/201 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GKTT   +L     R     + T E            +    G D      
Sbjct: 5   IILTGFRGSGKTTVGEMLSE---RTGLPFYDTDEMVEAECRMPIPEIFSKEGED------ 55

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                A  R +    VIR   +E  I+       S+    G         + +L+     
Sbjct: 56  -----AFRRAE--SKVIRELNLEPCIV-------ST----GGGLILNPENVMNLRR---- 93

Query: 127 EVMPD-CTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
               D    +L++  ++   R+    R SL   +  +  E   ++    RR  +  +A +
Sbjct: 94  ----DSLVFLLNVSPELAGMRISGSERPSLTGKSVGE--EAAGLI---SRRMPYYRMASD 144

Query: 184 QPDRCHIVDSAHSFQSVATNI 204
                  +D+  + + +   I
Sbjct: 145 F-----CIDAGLAPEEICDRI 160


>gi|194697436|gb|ACF82802.1| unknown [Zea mays]
 gi|195610014|gb|ACG26837.1| adenylate kinase [Zea mays]
          Length = 286

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 63/238 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
             G   +GK T   L+K   Q  +               +  R  + +   +   A+   
Sbjct: 74  ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 120

Query: 69  IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 +   V + I          +P   E    L D +  S          SQ + L+
Sbjct: 121 ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 167

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164
           +L+      + PD  I+LD+P ++ ++RV  R                           +
Sbjct: 168 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 221

Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +     EK         Q    +     +    V    +  +V   I  ++  +++K+
Sbjct: 222 RFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 279


>gi|170578794|ref|XP_001894548.1| hypothetical protein Bm1_15440 [Brugia malayi]
 gi|158598800|gb|EDP36612.1| hypothetical protein Bm1_15440 [Brugia malayi]
          Length = 379

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 3/121 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT    L+ F +   + V+   E          +   LS   ++     
Sbjct: 16  IVLTGGPCGGKTTGQERLRTFFEEIGWKVYTVPETANILLGGGVKFAELSK--EQCYRFQ 73

Query: 67  EAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + ++ A  R++ V  N    +  E  +++CDR      AY  ++  ++ L   +L + S+
Sbjct: 74  KDMLLALLRIEAVFFNQADVSNAERILIICDRGAMDPAAYIDKKSWNEMLKETNLDQFSL 133

Query: 126 Q 126
           +
Sbjct: 134 R 134


>gi|158431287|pdb|2YVU|A Chain A, Crystal Structure Of Ape1195
 gi|158431288|pdb|2YVU|B Chain B, Crystal Structure Of Ape1195
          Length = 186

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ +   G+ G+GKTT  + L   LQ++ Y V V          + AR  +        
Sbjct: 12  KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVL-------DGDWARTTVSEGAGFT- 63

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSL 120
               E +      L  +  + R     G I++C     S Y  A    R   +   +  L
Sbjct: 64  --REERL----RHLKRIAWIARLLARNGVIVIC--SFVSPYKQARNMVRRIVEEEGIPFL 115

Query: 121 Q 121
           +
Sbjct: 116 E 116


>gi|86147233|ref|ZP_01065548.1| adenylylsulfate kinase [Vibrio sp. MED222]
 gi|85834948|gb|EAQ53091.1| adenylylsulfate kinase [Vibrio sp. MED222]
          Length = 215

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++  L +                       LL       G   + 
Sbjct: 42  FTGLSGSGKSTVANAVESKLLQMGKH-----------------SYLLDGDNVRHGLNQDL 84

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               + R++++     V +  +  G I+L                S        ++E+  
Sbjct: 85  GFSDSDRIENIRRIGEVAKLFVDAGNIVLT------------AFISPFISDRQQVRELVT 132

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           +       + +D P+++   R
Sbjct: 133 EGEF--LEVFVDTPLEVCEAR 151


>gi|313888470|ref|ZP_07822137.1| guanylate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845499|gb|EFR32893.1| guanylate kinase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 206

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 46/216 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLL 55
           M+ G  +   G  G+GK T        L + N D+       TR P              
Sbjct: 1   MDGGFLLVLSGPSGSGKGTVS----EALMKNNDDIIFSTSVTTRTPRPGEVNGENYFFAT 56

Query: 56  SCGVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               +E   + E +  A    ++    +  +   + +G+I+L +  +D   A Q +    
Sbjct: 57  REEFEEMVEKDELLEHAFVHTNYYGTPKKFVFDEIEKGEIVLLE--IDVQGALQIKEKYK 114

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           +                     I  +P    +  +++R   R++   D  E        +
Sbjct: 115 EA------------------VFIFLIPP--TMDELRSRLVKRDTETEDEIE-------TR 147

Query: 173 RRQIFLDI-ARNQPDRCH---IVD-SAHSFQSVATN 203
            R  F ++    + D      ++D +    +++   
Sbjct: 148 YRNAFRELDFVGEYDYFVINDVIDNAVKDIETIIAA 183


>gi|312127911|ref|YP_003992785.1| guanylate kinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777930|gb|ADQ07416.1| guanylate kinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 199

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 50/227 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  GL I   G  G GK T +  L          +   TR+P            +     
Sbjct: 1   MREGLLIVISGPAGTGKGTVVGRLLEKNTNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E       + +A    ++    ++ +  AL +G  ++                    L 
Sbjct: 61  EEEIKNERFLEYAEYNNNYYGTPKDFVFEALEKGYDVI--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +++   + +++V  D  +I  LP   +   KR+  R +  E       E           
Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLVKRGTESEDEIRARLE----------- 149

Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215
                IA+N+    P+    +++   +    A  I  I+  E ++ R
Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189


>gi|237814536|ref|ZP_04593534.1| fructose transport system kinase [Brucella abortus str. 2308 A]
 gi|237789373|gb|EEP63583.1| fructose transport system kinase [Brucella abortus str. 2308 A]
          Length = 250

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 59  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 118

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 119 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 171

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 172 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 208


>gi|118780184|ref|XP_309986.3| AGAP009317-PA [Anopheles gambiae str. PEST]
 gi|116131160|gb|EAA05792.3| AGAP009317-PA [Anopheles gambiae str. PEST]
          Length = 197

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/85 (11%), Positives = 30/85 (35%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  +  +   +  + R+  R +   +   D  E          R+    I    P +   
Sbjct: 111 DIILYFECSNETLVARIMKRAAESSTVRADDNEETLKTRIATFRENTEKILVQYPTQLRR 170

Query: 191 VDSAHSFQSVATNILNIVWELVQKR 215
           +++  + + +  ++   + EL+  +
Sbjct: 171 INAERAPEEIFADVEKSIDELLAAK 195


>gi|229170585|ref|ZP_04298233.1| hypothetical protein bcere0007_55010 [Bacillus cereus AH621]
 gi|228612934|gb|EEK70111.1| hypothetical protein bcere0007_55010 [Bacillus cereus AH621]
          Length = 282

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTAAKLINEILSQNKIEVELFLE 39


>gi|121606619|ref|YP_983948.1| arsenite-activated ATPase subunit ArsA [Polaromonas
           naphthalenivorans CJ2]
 gi|120595588|gb|ABM39027.1| arsenite efflux ATP-binding protein ArsA [Polaromonas
           naphthalenivorans CJ2]
          Length = 600

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL +   G  G GKTT  S L   L ++ + VH+T        AE     L +  V 
Sbjct: 335 MGHGLIMVM-GKGGVGKTTIASALAVGLVQRGHSVHLTTTDPAAHVAETLNGSLPNLKVG 393

Query: 61  EFGAEAEAIVFAA 73
                AE   + A
Sbjct: 394 RIDPRAETEAYIA 406


>gi|13471644|ref|NP_103210.1| gluconokinase [Mesorhizobium loti MAFF303099]
 gi|14022387|dbj|BAB48996.1| gluconokinase [Mesorhizobium loti MAFF303099]
          Length = 160

 Score = 40.8 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 58/206 (28%)

Query: 11  GIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+ G GK+     L   L     +   +H         + E     L    +D  G    
Sbjct: 2   GVAGCGKSAVGIALAAALDAVFIEGDRLHPPENVARMASGEPLTDQLREGWLDAIGER-- 59

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                          I  ++ EG+ ++         A    + S +           ++ 
Sbjct: 60  ---------------IATSIGEGQGVVA--------ACSALKRSHRER---------LRG 87

Query: 128 VMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP- 185
             PD     L++      +RV +R      A L      D              A  +P 
Sbjct: 88  FCPDIVFLYLEIDPTTARRRVASRKGHFMPASL-----VDSQF-----------AILEPP 131

Query: 186 ---DRCHIVDSAHSFQSVATNILNIV 208
              +R   +D+         + + ++
Sbjct: 132 GSDERALTIDATRPVADAVADAMRLL 157


>gi|291514603|emb|CBK63813.1| Deoxynucleoside kinases [Alistipes shahii WAL 8301]
          Length = 204

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 29/163 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++I+  G  G+GKTT   +L +      YD     E    P         +    ++   
Sbjct: 1   MYIAIAGNIGSGKTTLTQILTKR-----YDAKCYLEECDNP--------YIGDFYEDMNR 47

Query: 65  EAEAIV--FAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSS 112
            A  +   F  +R+     +I     +  ++  DR  + D+               RD  
Sbjct: 48  WAFNLQISFLGSRIQQTMGMISDC--KSGVIFQDRTIYEDAHIFADNLHEMGLMATRDIE 105

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
            ++ +  L  ++     PD  I L   V   + +++ R    E
Sbjct: 106 TYMKIFRL--VTTLIPKPDLLIYLKASVPTLISQIRKRGREYE 146


>gi|296089470|emb|CBI39289.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 73/232 (31%), Gaps = 43/232 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   +GK T   L+ +     +              +E  R         +     
Sbjct: 145 IMISGAPASGKGTQCELITKKHDLVHIAAGDLLRAEVAAGSENGRRAKEFMEKGKLVPNE 204

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             ++    RL      ++P   E    L D +  S    Q +          +L+E    
Sbjct: 205 IVVMMVRDRL------LQPDSQEKGW-LLDGYPRS----QSQA--------TALKEF--- 242

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACL------------------DYFERKDVM 168
              PD  I+L++P +I ++RV  R     +  +                    F+  +  
Sbjct: 243 GFEPDLFILLEVPEEILVERVVGRRLDPVTGRIYHLKYSPPENEEIAARLTQRFDDTEEK 302

Query: 169 IHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           +  + R   Q    +     D    V+   S + V   I + + +LV+++ +
Sbjct: 303 VKLRLRTHHQNVEAVLSLYKDITIKVNGGVSKEEVFAQIDSALEKLVKQKKA 354


>gi|227508576|ref|ZP_03938625.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227191908|gb|EEI71975.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 295

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  GAGKTT ++L++  L   N+ +  +  +PG T   E    +             E I
Sbjct: 37  GPNGAGKTTLLNLIQGILSSHNHTITVLDSQPGSTIVKEKVATMFQDDLQINNVTVREFI 96

Query: 70  VFAAARLDHVEN 81
              AA+  H +N
Sbjct: 97  KLFAAQATHPKN 108


>gi|224044542|ref|XP_002194876.1| PREDICTED: putative guanylate kinase protein [Taeniopygia guttata]
          Length = 198

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 45/225 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M     +   G  GAGK+T +  L K +     + V H TR+P          H +    
Sbjct: 1   MQGPRPVVLSGPSGAGKSTLLKKLFKDYENVFGFSVSHTTRQPRPGEVNGKDYHFV---T 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E   E +A              I  A   G +     +  S  A Q  +  +Q   LD
Sbjct: 58  REEMQKEIDA-----------GEFIEHAEFSGNM-----YGTSKGAVQAVQAQNQICVLD 101

Query: 119 S----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                ++ I   E+ P   I + +     +I  KR+++R +  E +         V    
Sbjct: 102 VDIQGVKNIKKTELKP---IYISVQPPSIEILEKRLRDRKTETEESLQKRLTAARVD--- 155

Query: 172 KRRQIFLDIARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQK 214
                 L++++ +P      I++     +   + +  ++ E ++K
Sbjct: 156 ------LELSK-EPGLFDLVIIN--DDLEKAYSELKEVLLEEIKK 191


>gi|254420215|ref|ZP_05033939.1| ABC transporter, ATP-binding protein [Brevundimonas sp. BAL3]
 gi|196186392|gb|EDX81368.1| ABC transporter, ATP-binding protein [Brevundimonas sp. BAL3]
          Length = 536

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 48/151 (31%), Gaps = 30/151 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++  G  GAGKTT + L+   L           EP         R VLL         + 
Sbjct: 377 VAITGPNGAGKTTLLRLIHGAL-----------EPTTGRVERPCRAVLLDQEATILKPDE 425

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEIS 124
              +  A R  + E  +  A          RFL  + A   +    S       +L  + 
Sbjct: 426 T--LVEAWRRLNPEGSVNDAQAA-----LARFLFRNVAAHREVGALSGGERLRAALACVM 478

Query: 125 VQEVMPDCTII------LDLP----VDIGLK 145
                P   I+      LDL     V++ L+
Sbjct: 479 TGAAPPQLLILDEPTNHLDLDSVAAVEVALR 509


>gi|90961309|ref|YP_535225.1| ATPases of the AAA+ class [Lactobacillus salivarius UCC118]
 gi|90820503|gb|ABD99142.1| ATPases of the AAA+ class [Lactobacillus salivarius UCC118]
          Length = 535

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62
           FEG  G GKTT   ++ R            V  T+  E  G    +      LS  ++E 
Sbjct: 315 FEGPPGTGKTTVARIVARLFYALGILENTTVIETKRNELEGKWVGD------LSGKINEK 368

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
              A   V        + N   P   +GK ++
Sbjct: 369 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 399


>gi|46108272|ref|XP_381194.1| hypothetical protein FG01018.1 [Gibberella zeae PH-1]
          Length = 232

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 59/211 (27%), Gaps = 49/211 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKTT    L + L           E            +           E     
Sbjct: 59  GPAGCGKTTVAEYLAKSL---GMPYV---EGDAFHPTANIEKM---ANGIPLTDEDRWDW 109

Query: 71  FAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
             A R + +       L  G   ++L      S+      RD  +       + I +   
Sbjct: 110 LTALREESINR-----LNAGSCGVVL----TCSALKR-KYRDVIRVAGYYD-RRIQIHF- 157

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDVMIHEKRRQIFLDIARN 183
                + LD P ++ L RV  R +    A +     D  ER               +A  
Sbjct: 158 -----VFLDAPEELLLARVTQRQNHYMGANMVHSQFDILERP--------------LADE 198

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +      +D +   + V    L+ V E + K
Sbjct: 199 KD--VITIDVSRPIEVVEQEALSNVLETMAK 227


>gi|225626608|ref|ZP_03784647.1| fructose transport system kinase [Brucella ceti str. Cudo]
 gi|225618265|gb|EEH15308.1| fructose transport system kinase [Brucella ceti str. Cudo]
          Length = 250

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 59  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 118

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 119 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 171

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 172 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 208


>gi|53725668|ref|YP_102419.1| adenylylsulfate kinase [Burkholderia mallei ATCC 23344]
 gi|76809462|ref|YP_334183.1| adenylylsulfate kinase [Burkholderia pseudomallei 1710b]
 gi|52429091|gb|AAU49684.1| adenylylsulfate kinase [Burkholderia mallei ATCC 23344]
 gi|76578915|gb|ABA48390.1| adenylylsulfate kinase [Burkholderia pseudomallei 1710b]
          Length = 204

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  A+   
Sbjct: 18 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 60

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 61 SDADRMENIRRFAHVAKLFQREGYVVI 87


>gi|15645243|ref|NP_207413.1| adenylate kinase [Helicobacter pylori 26695]
 gi|2497478|sp|P56104|KAD_HELPY RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|2313740|gb|AAD07683.1| adenylate kinase (adk) [Helicobacter pylori 26695]
          Length = 191

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 76/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM-EGK-ILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   GK I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSGKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D    + V  H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               +D   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAIDGERSIEEIVGEMQEYILSF 189


>gi|326693305|ref|ZP_08230310.1| deoxyguanosine kinase [Leuconostoc argentinum KCTC 3773]
          Length = 210

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 52/225 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT  SL+               EP G                     +    +   
Sbjct: 10  GVGKTTLTSLIAEHF---GTKAFY--EPVGDNPVLPL---------YYSDPKQYGFLLQI 55

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
             L+   ++I+ AL +   +L DR  + D+ +  +  +D                  +  
Sbjct: 56  YFLNRRFDMIKQALADDNNVL-DRSIYEDALFTAENHKDGNITDAEMEVYTQLLDNMMAE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++  +   PD  +  +   +  L R++ R    E      F+  D +     RQ +  
Sbjct: 115 LQKLPKKA--PDLLVYAETDFETILYRIKKRGRDYEQ-----FDENDEL-----RQYYFR 162

Query: 180 IARNQPDRCHIVDSAH---------SFQSVATN--ILNIVWELVQ 213
           I     D     D++            +  A    IL+ + E ++
Sbjct: 163 IWSAYRDWFEAYDASPKIKIDLQTYDLEETANQQIILDQIDEALK 207


>gi|325475705|gb|EGC78881.1| bacteriocin ABC transporter [Treponema denticola F0402]
          Length = 721

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 59/227 (25%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G+ I+F G  G+GKTT + LL +F   ++ ++ +          E+ R ++      
Sbjct: 505 IKPGMKIAFVGASGSGKTTLVKLLMKFYNFQSGEILIDGLNIKDLETESYRKLIGYVPQ- 563

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++F+ +  +++          G       FL  +  Y   + S    F++ L
Sbjct: 564 ------EVLLFSGSIRENI------LWGNG-------FLPENALYYAAKVSRSDAFINKL 604

Query: 121 QEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    PD   TI            +  R +                  E++R    
Sbjct: 605 ---------PDRYETI------------IGERGATLSGG-------------ERQRIALA 630

Query: 179 DIARNQPDRCHIVD-SAHSFQSVAT-NILNIVWELVQKRVSPLSSKK 223
            I   +P +  I+D +  S  ++    I+N + E+++ + + + + +
Sbjct: 631 RILLREP-KILILDEATASLDAITEKAIMNTIEEIIENKTTIIVAHR 676


>gi|77461731|ref|YP_351238.1| adenylylsulfate kinase [Pseudomonas fluorescens Pf0-1]
 gi|77385734|gb|ABA77247.1| putative adenylylsulfate kinase [Pseudomonas fluorescens Pf0-1]
          Length = 182

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 9/89 (10%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I   G+ GAGK+T    L   L+ +   V +          +  R V  +          
Sbjct: 10 IWITGLSGAGKSTLAGDLVDRLRSRGESVVML-------DGDELREVFGATAASSQNHGR 62

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLC 95
          E  +  A +  H+  +I  A     +++ 
Sbjct: 63 EGRLALAMQYAHLCRMI--AAQGHTVVIA 89


>gi|325286834|ref|YP_004262624.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Cellulophaga lytica DSM 7489]
 gi|324322288|gb|ADY29753.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Cellulophaga lytica DSM 7489]
          Length = 381

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 66/203 (32%), Gaps = 25/203 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F++ EG  GAGKTT  + +      K         P      E             F  E
Sbjct: 181 FLAIEGNIGAGKTTLANKISEDYNAKLIVERFADNPFLPKFYE-------DQTRYAFPLE 233

Query: 66  AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123
                F A R     ++  +  L    ++  D  +  S  +           L   L ++
Sbjct: 234 MS---FLADRYQQYSDDTSQLDLFRSFMV-SDYDIFKSLIFAKVTLHQDEFKLYRKLFDL 289

Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181
             ++V  PD  + L    +  +  ++ R    E     DY E        K  + +LD  
Sbjct: 290 MYKDVKKPDVFVYLYQNTERLIANIKKRGREYEQDIQTDYLE--------KINKGYLDFI 341

Query: 182 RNQP-DRCHIVDSAHSFQSVATN 203
           ++ P     I+D +     VA +
Sbjct: 342 KSYPQQNTFIIDVS-DLDFVAND 363


>gi|313665416|ref|YP_004047287.1| hypothetical protein MSB_A0545 [Mycoplasma leachii PG50]
 gi|312950042|gb|ADR24638.1| conserved domain protein [Mycoplasma leachii PG50]
          Length = 112

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 11/100 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT +  LK+ L +K   V+ T      P    A         D      
Sbjct: 3   IAIFGTTGAGKTTLLENLKKLLDKKYVFVNETS--LDCPYFNKAYD---DSNSDVQDYNY 57

Query: 67  EA-IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           +  +     R   ++  I+      + ++ DR +  S  +
Sbjct: 58  KLDLWMLTDR---MKTFIK--YKNHQNVIYDRSILDSMVF 92


>gi|299535184|ref|ZP_07048508.1| hypothetical protein BFZC1_04158 [Lysinibacillus fusiformis ZC1]
 gi|298729305|gb|EFI69856.1| hypothetical protein BFZC1_04158 [Lysinibacillus fusiformis ZC1]
          Length = 274

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 33/155 (21%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL + FEG++ AGK   I  L   +  + Y VH    P   P A   R+  L     +  
Sbjct: 43  GLILVFEGMDAAGKGGAIKRLIERVDPRGYVVH----PISAPQAHELRYNYLQRFWRKLP 98

Query: 64  AEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              +  +F   R  +   +   I     + +          S AY           +++ 
Sbjct: 99  QHGQIAIF--DRSWYGRVLVERIEGFATKDEW---------SRAY---------EEINNF 138

Query: 121 QEISVQEVMPDCTI---ILDLPVDIGLKRVQNRYS 152
           ++I       D  I    L +  +  LKR + R  
Sbjct: 139 EKILTAG---DYIIIKFWLHVSDEEQLKRFKEREQ 170


>gi|159040898|ref|YP_001540150.1| hypothetical protein Cmaq_0312 [Caldivirga maquilingensis IC-167]
 gi|221272209|sp|A8MB70|NTPTH_CALMQ RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase
          THEP1; AltName: Full=Nucleoside triphosphate
          phosphohydrolase
 gi|157919733|gb|ABW01160.1| protein of unknown function DUF265 [Caldivirga maquilingensis
          IC-167]
          Length = 173

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          M  G+F++  G  G GKTT I  +   L+ +   + 
Sbjct: 1  MVQGVFVT--GPPGVGKTTLIVKVTSRLKERGIRIV 34


>gi|158320252|ref|YP_001512759.1| ATPase [Alkaliphilus oremlandii OhILAs]
 gi|158140451|gb|ABW18763.1| ATPase [Alkaliphilus oremlandii OhILAs]
          Length = 364

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
             I  EG +G GK+T +  L      K YDV V  EP
Sbjct: 219 KIIYIEGEDGTGKSTLLERLMNTAVTKGYDVEVYHEP 255


>gi|331700720|ref|YP_004397679.1| phosphonate-transporting ATPase [Lactobacillus buchneri NRRL
          B-30929]
 gi|329128063|gb|AEB72616.1| Phosphonate-transporting ATPase., Heme-transporting ATPase
          [Lactobacillus buchneri NRRL B-30929]
          Length = 553

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          +N G FI   G  G+GKTT I+  K+ L    + 
Sbjct: 29 INRGEFIVIAGATGSGKTTLINHFKKELLPNGHR 62


>gi|291530254|emb|CBK95839.1| Uridine kinase [Eubacterium siraeum 70/3]
          Length = 176

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 128 VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
           + P  DC I +D P+DI + R   R      A  D    +     +  R  ++ + +N  
Sbjct: 92  IKPYLDCCIFIDTPLDIAMARRILR--DMREATSDEICNEMDTYLKYARTAYIQMVKNHL 149

Query: 186 DRC-HIVDSAHSFQSVATNILNIVWEL 211
             C +++D A   +S+    + I+  +
Sbjct: 150 ATCDYVIDGAKELESIINETVEIISRI 176


>gi|196034111|ref|ZP_03101521.1| conserved hypothetical protein [Bacillus cereus W]
 gi|195993185|gb|EDX57143.1| conserved hypothetical protein [Bacillus cereus W]
          Length = 141

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 16/92 (17%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          IS +G   +GKTT    L + L+     V     P   P  E  + + L     E     
Sbjct: 5  ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53

Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR 97
              F A +   +E  I+     +G +++ DR
Sbjct: 54 ----FIANQKMFIEAKIKEFQNAKGSVVIFDR 81


>gi|53711420|ref|YP_097412.1| hypothetical protein BF0129 [Bacteroides fragilis YCH46]
 gi|154490881|ref|ZP_02030822.1| hypothetical protein PARMER_00798 [Parabacteroides merdae ATCC
           43184]
 gi|167762735|ref|ZP_02434862.1| hypothetical protein BACSTE_01093 [Bacteroides stercoris ATCC
           43183]
 gi|189461194|ref|ZP_03009979.1| hypothetical protein BACCOP_01841 [Bacteroides coprocola DSM 17136]
 gi|189464465|ref|ZP_03013250.1| hypothetical protein BACINT_00807 [Bacteroides intestinalis DSM
           17393]
 gi|198277343|ref|ZP_03209874.1| hypothetical protein BACPLE_03555 [Bacteroides plebeius DSM 17135]
 gi|212692144|ref|ZP_03300272.1| hypothetical protein BACDOR_01639 [Bacteroides dorei DSM 17855]
 gi|218131454|ref|ZP_03460258.1| hypothetical protein BACEGG_03072 [Bacteroides eggerthii DSM 20697]
 gi|218261263|ref|ZP_03476135.1| hypothetical protein PRABACTJOHN_01799 [Parabacteroides johnsonii
           DSM 18315]
 gi|237709571|ref|ZP_04540052.1| TraA [Bacteroides sp. 9_1_42FAA]
 gi|237717853|ref|ZP_04548334.1| TraA [Bacteroides sp. 2_2_4]
 gi|255012125|ref|ZP_05284251.1| hypothetical protein Bfra3_23497 [Bacteroides fragilis 3_1_12]
 gi|265766694|ref|ZP_06094523.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|294644213|ref|ZP_06721985.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294807393|ref|ZP_06766199.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298377041|ref|ZP_06986995.1| conjugative transposon protein TraA [Bacteroides sp. 3_1_19]
 gi|298483562|ref|ZP_07001738.1| conjugative transposon protein TraA [Bacteroides sp. D22]
 gi|301309277|ref|ZP_07215220.1| putative conjugative transposon protein TraA [Bacteroides sp. 20_3]
 gi|52214285|dbj|BAD46878.1| TraA [Bacteroides fragilis YCH46]
 gi|154088629|gb|EDN87673.1| hypothetical protein PARMER_00798 [Parabacteroides merdae ATCC
           43184]
 gi|167699075|gb|EDS15654.1| hypothetical protein BACSTE_01093 [Bacteroides stercoris ATCC
           43183]
 gi|189432108|gb|EDV01093.1| hypothetical protein BACCOP_01841 [Bacteroides coprocola DSM 17136]
 gi|189438255|gb|EDV07240.1| hypothetical protein BACINT_00807 [Bacteroides intestinalis DSM
           17393]
 gi|198269841|gb|EDY94111.1| hypothetical protein BACPLE_03555 [Bacteroides plebeius DSM 17135]
 gi|212665265|gb|EEB25837.1| hypothetical protein BACDOR_01639 [Bacteroides dorei DSM 17855]
 gi|217986386|gb|EEC52723.1| hypothetical protein BACEGG_03072 [Bacteroides eggerthii DSM 20697]
 gi|218224142|gb|EEC96792.1| hypothetical protein PRABACTJOHN_01799 [Parabacteroides johnsonii
           DSM 18315]
 gi|229452793|gb|EEO58584.1| TraA [Bacteroides sp. 2_2_4]
 gi|229456207|gb|EEO61928.1| TraA [Bacteroides sp. 9_1_42FAA]
 gi|263253071|gb|EEZ24547.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|292640445|gb|EFF58691.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294445413|gb|EFG14074.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|298266025|gb|EFI07684.1| conjugative transposon protein TraA [Bacteroides sp. 3_1_19]
 gi|298270319|gb|EFI11904.1| conjugative transposon protein TraA [Bacteroides sp. D22]
 gi|300832722|gb|EFK63349.1| putative conjugative transposon protein TraA [Bacteroides sp. 20_3]
          Length = 349

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 97  MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 150

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 151 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 189

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 190 DDAERMIATEDVKPD-VVFFDMP 211


>gi|323188583|gb|EFZ73868.1| hypothetical protein ECRN5871_3002 [Escherichia coli RN587/1]
          Length = 154

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 31/157 (19%)

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQ 126
             AR       +      G I+L DR+       AY G     +     F+  L     +
Sbjct: 13  FVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERK 72

Query: 127 EV------MPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    PD  I L++ +++   R     R SL     +       +           
Sbjct: 73  AFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGA 122

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +          +D+    + V  +    + + +  R
Sbjct: 123 QLVD--------IDANQPLEKVLVDAEKAITDFMTAR 151


>gi|315426764|dbj|BAJ48387.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 271

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 15/83 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA---ARHVLLSCGVDEFGAEAEAIV 70
           GAGK+T   +L + L+ K +   V R P      E     R   L        +  E   
Sbjct: 100 GAGKSTVSRMLVKLLREKGHRPVVVRHPMPYGVLEKQVVQRFASLDDLDRYRCSIEE--- 156

Query: 71  FAAARLDHVENVIRPALMEGKIL 93
                         P L EG I+
Sbjct: 157 ---------REEFEPHLREGTIV 170


>gi|258564536|ref|XP_002583013.1| uridylate kinase [Uncinocarpus reesii 1704]
 gi|237908520|gb|EEP82921.1| uridylate kinase [Uncinocarpus reesii 1704]
          Length = 246

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 63/214 (29%), Gaps = 40/214 (18%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK T  + L R      L      +   +   G+   E  RH +    +      
Sbjct: 48  GGPGSGKGTQSANLVRDYGFSHLSA-GDLLRAEQNREGSKYGELIRHYIREGLIVPM-EI 105

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++  A      E   +  L  G        + S +   G             +E  V
Sbjct: 106 TVALLSNAMADILEERRAQNTLRAG--------VPSRFLIDGFPRKMDQAVF--FEETVV 155

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR----------Q 175
             V    T+ L  P ++ L R+  R         D  E     IH++ R          +
Sbjct: 156 PSV---ATLFLSCPEEVMLNRLLKRGET-SGRADDNIES----IHKRFRVFIDQSMPVVE 207

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +      +  +   V S  +   V + +   + 
Sbjct: 208 HY-----EKEGKVMTVSSVGTIDEVYSGVKKEIE 236


>gi|227878413|ref|ZP_03996353.1| deoxyguanosine kinase [Lactobacillus crispatus JV-V01]
 gi|256849566|ref|ZP_05554998.1| deoxyguanosine kinase [Lactobacillus crispatus MV-1A-US]
 gi|262046234|ref|ZP_06019197.1| deoxyguanosine kinase [Lactobacillus crispatus MV-3A-US]
 gi|293381342|ref|ZP_06627344.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1]
 gi|227861942|gb|EEJ69521.1| deoxyguanosine kinase [Lactobacillus crispatus JV-V01]
 gi|256713682|gb|EEU28671.1| deoxyguanosine kinase [Lactobacillus crispatus MV-1A-US]
 gi|260573564|gb|EEX30121.1| deoxyguanosine kinase [Lactobacillus crispatus MV-3A-US]
 gi|290922089|gb|EFD99089.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1]
          Length = 228

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 79/228 (34%), Gaps = 43/228 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121
           +  A +     L+   + I+ AL E   +L DR +   +  +Q   D  +     +D+  
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106

Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           E+    + E+       PD  + +++  D  +KR+Q R    E    D         +++
Sbjct: 107 ELLHNMMGELERMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD---STLEDYYKR 163

Query: 173 RRQIFLDIARNQPDRCHI-VDSAH--------SFQSVATNILNIVWEL 211
             + +     N      + +D             + V   I   + E+
Sbjct: 164 LLRYYKPWYENYDYSPKMEIDGDKLDFMANPDDKEKVLDQITAKLKEM 211


>gi|225717932|gb|ACO14812.1| Adenylate kinase isoenzyme 1 [Caligus clemensi]
          Length = 192

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 69/213 (32%), Gaps = 48/213 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK TH   +   L +  +    T +        G+        ++ +        
Sbjct: 18  GGPGSGKGTHCESI---LAKYGFTHLSTGDLLRIEVMSGSDRGLKLYKIMSNGDKAPNDM 74

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E +         VE +I  A      L+ D +                + +   +   
Sbjct: 75  VDEIL---------VEAMIAKASESKGFLI-DGY---------------PINIAQAECFI 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180
                P+C ++L+   ++   R++ R +         F+  D  I ++    F D    I
Sbjct: 110 KDIREPNCLLVLEANNEVLRGRLKARGN---------FDDTDESIKKRI-ATFNDETRPI 159

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                    IV++    + V  ++  I+ EL+Q
Sbjct: 160 LSKFSKITKIVNAERKPEQVWEDVNKIILELIQ 192


>gi|30263602|ref|NP_845979.1| hypothetical protein BA_3716 [Bacillus anthracis str. Ames]
 gi|47778199|ref|YP_022652.1| hypothetical protein GBAA_3716 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|30258237|gb|AAP27465.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47551904|gb|AAT35386.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
          Length = 166

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 36/162 (22%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GKTT      + L+     V     P   P  E  + + L     E         F A 
Sbjct: 3   SGKTTL----AKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG--------FIAN 47

Query: 75  RLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHLFLDSLQEI 123
           +   +E  I+     +G +++ DR          F  ++   + + ++     L  L+E 
Sbjct: 48  QKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKDELYKLRE- 106

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLD 160
                  D    LD+       R      +NR +  E   +D
Sbjct: 107 ----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQFYVD 144


>gi|67594051|ref|XP_665771.1| ABC transporter protein [Cryptosporidium hominis TU502]
 gi|54656597|gb|EAL35540.1| ABC transporter protein [Cryptosporidium hominis]
          Length = 699

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 17/158 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
           + G  I   G  G+GK+T ++ L   L+ + Y++                  R V+    
Sbjct: 51  SPGQLIGIMGPSGSGKSTLLNALSGRLKGREYNIKGSVAINGFTDIDLGYLTRMVVQDDY 110

Query: 59  VDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQ 113
           +  +    E + + A  RL H     R    E  I + D    R +  +Y     +    
Sbjct: 111 LLPYLTIKETMDIVAGLRLPHYSKKDR---EEKIIEILDIMGLRHVQDTYVGGISKKGIS 167

Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149
              +  L  I+++ +   P   + LD     GL   + 
Sbjct: 168 GGEMKRLS-IALELIQNPP--ILFLD-EPTTGLDAARA 201


>gi|291482384|dbj|BAI83459.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 217

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 34/220 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    +   +  E    P  E   H       + +    
Sbjct: 12  ITVAGTVGVGKSTLTKTLAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119
           +   F A R        +     G   + DR  + D+       A +G      +    S
Sbjct: 63  QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTS 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175
           L E   ++     PD  I L+  ++  L R++ R    E      Y+E     +H +   
Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWE----EMHTRYEN 173

Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               F    + + + +   +++  +S +++   I +++ +
Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHD 213


>gi|242082794|ref|XP_002441822.1| hypothetical protein SORBIDRAFT_08g002900 [Sorghum bicolor]
 gi|241942515|gb|EES15660.1| hypothetical protein SORBIDRAFT_08g002900 [Sorghum bicolor]
          Length = 927

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 27/91 (29%), Gaps = 11/91 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA---RHVLLSCGVDEFGAEA- 66
           G  G GKTT +  L   L      V    E  G   +          +            
Sbjct: 32  GPPGCGKTTLLKALAGKLNATGLKVTGEVEYNGVELSSFVPEKTAAYIDQYDLHVPEMTV 91

Query: 67  -EAIVFAA------ARLDHVENVIRPALMEG 90
            E I F+A       R + ++ VIR     G
Sbjct: 92  RETIDFSARFQGVGNRAEIMKEVIRKEKEAG 122


>gi|294934198|ref|XP_002781028.1| Guanylate kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239891199|gb|EER12823.1| Guanylate kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 219

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 44/188 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  GAGK+T I  L +       + V H TR   G    E             F +    
Sbjct: 33  GPSGAGKSTLIKRLLKEFPGHFGFSVSHTTR---GMRTGEV------DGKSYHFTSRPTM 83

Query: 69  IVFAAA--RLDHVENV----------IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               A    ++H E            +R  L  G+I + D                    
Sbjct: 84  EAAMADGEFIEHAEVHGNLYGTSKASVREVLSHGEICILD---------------IDVQG 128

Query: 117 LDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           ++SL+  +     P       +      +  KR+++R +  E+A     E     +  + 
Sbjct: 129 VESLKASTDLGFYPTYVF---ISPPSMQVLEKRLRDRKTETEAAIEKRLETARKEMTYRD 185

Query: 174 RQIFLDIA 181
              F D+ 
Sbjct: 186 IPGFWDLV 193


>gi|146076472|ref|XP_001462935.1| adenylate kinase [Leishmania infantum JPCM5]
 gi|134067016|emb|CAM65121.1| putative adenylate kinase [Leishmania infantum JPCM5]
 gi|322496363|emb|CBZ31434.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 209

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 59/233 (25%), Gaps = 65/233 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI   G  G+GK T+ + L                     A E  R    S   +    
Sbjct: 19  FFIL--GGPGSGKGTNCARLVE-----------DFGYTHFSAGELLREAARSGTGNLA-- 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL------------LCDRFLDSSYAYQGERDSS 112
                             I   +  G I+            + D      Y   G     
Sbjct: 64  -----------------KIGDIIRSGNIVPSEITVELLRQAIADHPNSVGYVIDGFPRKE 106

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               +            P   +  D       +R+ +R +          E++D    E 
Sbjct: 107 DQARM-----FEEGIAKPTGILYYDCSEATMEERLLSRGANSG-------EKRDDDAAET 154

Query: 173 RRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
            R  F    +             RCH++D+     +V  +   +  E+ +K +
Sbjct: 155 IRHRFRVNVQECMPVVEAYKANGRCHVIDANRDRDTVYADTKKVFLEMGEKPL 207


>gi|320587626|gb|EFX00101.1| thymidylate kinase [Grosmannia clavigera kw1407]
          Length = 415

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 35/107 (32%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA--------- 181
           D  + LDL  +   KR             D    +   +  + + +F  ++         
Sbjct: 303 DLVLFLDLDEEQAKKR---------GGWGDEL-YEKAEMQRRVKDLFWGLSFGRIDVKGA 352

Query: 182 ----------------RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                           R + +   +VD++ S   VA  I  IV   +
Sbjct: 353 VKAGEDHADFAVGLTFRQEEEDLSVVDASASAHDVADAIWKIVHPRI 399


>gi|108563024|ref|YP_627340.1| adenylate kinase [Helicobacter pylori HPAG1]
 gi|123373786|sp|Q1CTQ6|KAD_HELPH RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|107836797|gb|ABF84666.1| adenylate kinase [Helicobacter pylori HPAG1]
          Length = 191

 Score = 40.8 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELI----SKNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+     +I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKRIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D    + V  H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +A             +++   S + +   +   +   
Sbjct: 151 DPLAEIQNFYKAKHLHKVINGERSIEEIVHEMQEYILSF 189


>gi|316973853|gb|EFV57402.1| conserved hypothetical protein [Trichinella spiralis]
          Length = 385

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 32/181 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62
             I  EG  G+GK      L   L           +          RH   LL      F
Sbjct: 71  RLIVVEGNIGSGKGKFSRELAELLGFHYIPAVNLDDIFVDSYGIDRRHYYHLLPESCRFF 130

Query: 63  GAEAEA------------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105
            A+                +   +++++  N +   +  G+ ++ +R   S + +     
Sbjct: 131 DAKLFYENPKHKNVANFQYMMFYSKVENYLNSLAHLMNTGQGVVTERIAHSDFVFVKAMH 190

Query: 106 -QGERDSSQHLFLDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            QG      + +   L++  ++   + P   I LD PV              E   LD +
Sbjct: 191 EQGFLSDDFYDYYFKLKKHILATIPLFPHLVIYLDCPV----------VEDIEKVDLDTY 240

Query: 163 E 163
           E
Sbjct: 241 E 241


>gi|225374445|ref|ZP_03751666.1| hypothetical protein ROSEINA2194_00060 [Roseburia inulinivorans DSM
           16841]
 gi|225213683|gb|EEG96037.1| hypothetical protein ROSEINA2194_00060 [Roseburia inulinivorans DSM
           16841]
          Length = 450

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 22/122 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-----E 61
           I  EG++GAGKTT  + L    + K   V +T      P A     + ++          
Sbjct: 105 IMMEGLQGAGKTTTAAKLAGKFKLKGKKVLLTACDIYRPGA--IEQLQINGEKQGVEVFS 162

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G + + +  A A ++H          E  I++ D            R       +  LQ
Sbjct: 163 MGDKIKPVNIAKAAIEHAAK------NEFNIVILD---------TAGRLHIDDDMMAELQ 207

Query: 122 EI 123
           EI
Sbjct: 208 EI 209


>gi|149633267|ref|XP_001509757.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2
            [Ornithorhynchus anatinus]
          Length = 4391

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 30/125 (24%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60
             +G+ I   G  G GK+T   +L+  L +    V   T  P   P     RH LL  G  
Sbjct: 2063 RTGVVIV--GPSGTGKSTLWRMLRAALCKVGKTVKQYTMNPKAMP-----RHQLL--GYI 2113

Query: 61   EFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +      +  ++  +AR      V+R        ++CD                   +++
Sbjct: 2114 DMDTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIE 2155

Query: 119  SLQEI 123
            SL  +
Sbjct: 2156 SLNSV 2160


>gi|124008196|ref|ZP_01692893.1| adenylate kinase [Microscilla marina ATCC 23134]
 gi|123986295|gb|EAY26117.1| adenylate kinase [Microscilla marina ATCC 23134]
          Length = 191

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 42/182 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   +GK T    LK            T         +  R        +      
Sbjct: 4   IIITGPPYSGKGTQCQFLKD-----------TFNLAHVSTGDRIRE-----EKENKTEVG 47

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI--------LLCDRFLDSSYAYQGERDSSQHLFLD 118
           + +   A R + V + +   L    I        ++ D +  +               +D
Sbjct: 48  KLMSEYADRGELVPDEVMKNLFGNVIDENLNKAGIILDGYPRT------------KPQVD 95

Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +L E++ ++  P    + +++P +  LKR + R     +A  D  + K+   H KR ++F
Sbjct: 96  TLLELASEKNTPITHVLNIEVPTEELLKRAKKR-----AATSDREDDKNEQTHLKRIKVF 150

Query: 178 LD 179
            +
Sbjct: 151 EE 152


>gi|74967379|sp|Q27802|DYHC2_TRIGR RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName:
            Full=Dynein heavy chain isotype 1B
 gi|17019507|gb|AAA63583.2| dynein heavy chain isotype 1B [Tripneustes gratilla]
          Length = 4318

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 24/114 (21%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
            G  G+GK+T   +L+  L      V   T  P   P  +   H+       E+      +
Sbjct: 1989 GPSGSGKSTTWQILRAALNNTGQVVKQYTMNPKAMPRTQLLGHI--DMDTREWSDG--VL 2044

Query: 70   VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             ++A        V+R        ++CD                   +++SL  +
Sbjct: 2045 TYSA------RQVVREPQEIHSWIICD-------------GDIDPEWIESLNSV 2079


>gi|78222085|ref|YP_383832.1| cytidylate kinase [Geobacter metallireducens GS-15]
 gi|78193340|gb|ABB31107.1| cytidylate kinase [Geobacter metallireducens GS-15]
          Length = 232

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            GL I+ +G  GAGK+T    L   L
Sbjct: 3  RRGLIIAIDGPSGAGKSTITKRLADRL 29


>gi|21673086|ref|NP_661151.1| guanylate kinase [Chlorobium tepidum TLS]
 gi|45477147|sp|Q8KFS5|KGUA_CHLTE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|21646157|gb|AAM71493.1| guanylate kinase [Chlorobium tepidum TLS]
          Length = 195

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 68/218 (31%), Gaps = 38/218 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           ++ G  I F    G GK+T   L+   L    + V   TR+           H L     
Sbjct: 7   LDQGRLIVFSAPSGTGKSTVAKLVMERLGSLEFSVSATTRQMRAGERDGVDYHFLSREEF 66

Query: 60  DEFGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++  AE    E   F       + +    A+  G  LL D  LD   A   +R       
Sbjct: 67  EKKIAENGFIEHEFFFGNFYGTLLDKTIDAIKAGHNLLFD--LDVKGALNLKRIFGDQAL 124

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           L  L+                 P   +   +R+Q R S    A     ER ++       
Sbjct: 125 LVFLK-----------------PPSMEELARRLQARDSESAEALKSRLERAEME------ 161

Query: 175 QIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWE 210
              L  A        +V  D   +  +VAT I   + +
Sbjct: 162 ---LSHAGEFD--FVVVNDDLGRTVDAVATRIAEFLPQ 194


>gi|312082413|ref|XP_003143434.1| dephospho-CoA kinase [Loa loa]
 gi|307761403|gb|EFO20637.1| dephospho-CoA kinase [Loa loa]
          Length = 234

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 12/79 (15%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D P DI LKR+Q R ++ E A       +  M  ++RR              H+VD
Sbjct: 130 VVLVDCPEDIQLKRLQQRDNIDEEAAQKRINAQHPMSDKRRRAT------------HVVD 177

Query: 193 SAHSFQSVATNILNIVWEL 211
           ++ + +     +LN++ E 
Sbjct: 178 NSGTMEETRAQVLNLIREF 196


>gi|227487085|ref|ZP_03917401.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227541751|ref|ZP_03971800.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227093159|gb|EEI28471.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227182457|gb|EEI63429.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 181

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 68/208 (32%), Gaps = 37/208 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60
           I   G  GAGK T  +LLK  L         T +        GT   + A+  + +  + 
Sbjct: 3   IVLLGPPGAGKGTQAALLKDKL---GIPHISTGDLFRANIGEGTELGKEAKSYMDAGNLV 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  +     RL H          +G   L D F          R   Q   L   
Sbjct: 60  PTDVTARMLW---DRLSH------EDAKDGY--LLDGF---------PRTVEQAELLRD- 98

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             ++      D  +  ++  D+ ++R+  R    ++        +  + HE+ +     +
Sbjct: 99  -HLAENGEEIDAVLSFEVSDDVVVERMLARGRDDDNEATIR--NRLKVYHEETQ----PV 151

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           A    D+   VD+  S + +    +  +
Sbjct: 152 ADFYGDKLLPVDAEGSVEEINERAMKAL 179


>gi|42525941|ref|NP_971039.1| bacteriocin ABC transporter, ATP-binding/permease, putative
           [Treponema denticola ATCC 35405]
 gi|41815991|gb|AAS10920.1| bacteriocin ABC transporter, ATP-binding/permease, putative
           [Treponema denticola ATCC 35405]
          Length = 721

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 59/227 (25%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G+ I+F G  G+GKTT + LL +F   ++ ++ +          E+ R ++      
Sbjct: 505 IKPGMKIAFVGASGSGKTTLVKLLMKFYNFQSGEILIDGLNIKDLETESYRKLIGYVPQ- 563

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++F+ +  +++          G       FL  +  Y   + S    F++ L
Sbjct: 564 ------EVLLFSGSIRENI------LWGNG-------FLPENALYYAAKVSRSDAFINKL 604

Query: 121 QEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    PD   TI            +  R +                  E++R    
Sbjct: 605 ---------PDRYETI------------IGERGATLSGG-------------ERQRIALA 630

Query: 179 DIARNQPDRCHIVD-SAHSFQSVAT-NILNIVWELVQKRVSPLSSKK 223
            I   +P +  I+D +  S  ++    I+N + E+++ + + + + +
Sbjct: 631 RILLREP-KILILDEATASLDAITEKAIMNTIEEIIENKTTIIVAHR 676


>gi|41408697|ref|NP_961533.1| hypothetical protein MAP2599c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118465717|ref|YP_880570.1| adenylylsulfate kinase [Mycobacterium avium 104]
 gi|254774201|ref|ZP_05215717.1| adenylylsulfate kinase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|41397055|gb|AAS04916.1| hypothetical protein MAP_2599c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118167004|gb|ABK67901.1| adenylylsulfate kinase [Mycobacterium avium 104]
          Length = 230

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 17/148 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  +++++ L  +    ++           A   +L      E
Sbjct: 23  HKGCVIWFTGLSGSGKSTVANVVEQKLYERGIRSYLLDGDNVRYGLNAGPDLLEERHGPE 82

Query: 62  FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           F         A  R +++  +    +     G I L         A+       +     
Sbjct: 83  FAQRFGLGFSAQDREENIRRIGAVAKLFCEAGIIALT--------AFISPYVRDRDAIRA 134

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +L +   QE      I +D P++I  KR
Sbjct: 135 TLDDGDFQE------IFIDTPIEICEKR 156


>gi|315426755|dbj|BAJ48379.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 403

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 15/83 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA---ARHVLLSCGVDEFGAEAEAIV 70
           GAGK+T   +L + L+ K +   V R P      E     R   L        +  E   
Sbjct: 100 GAGKSTVSRMLVKLLREKGHRPVVVRHPMPYGVLEKQVVQRFASLDDLDRYRCSIEE--- 156

Query: 71  FAAARLDHVENVIRPALMEGKIL 93
                         P L EG I+
Sbjct: 157 ---------REEFEPHLREGTIV 170


>gi|119364603|sp|Q8XJK8|KGUA_CLOPE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
          Length = 216

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 56/217 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          +   TR P          H L      
Sbjct: 9   NRGVLIVISGPSGAGKGTICKALLEKHDDIFISISATTRNPRVGEVDGVNYHFLTKEEFK 68

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +  AE + +       +H E          + +   L EGK ++                
Sbjct: 69  QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 106

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
                    ++E +          I  LP   +   +R+  R S    + +  F+     
Sbjct: 107 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 157

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200
                   + +I         +V     D+    +++
Sbjct: 158 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 187


>gi|18310730|ref|NP_562664.1| guanylate kinase [Clostridium perfringens str. 13]
 gi|18145411|dbj|BAB81454.1| guanylate kinase [Clostridium perfringens str. 13]
          Length = 219

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 56/217 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          +   TR P          H L      
Sbjct: 12  NRGVLIVISGPSGAGKGTICKALLEKHDDIFISISATTRNPRVGEVDGVNYHFLTKEEFK 71

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +  AE + +       +H E          + +   L EGK ++                
Sbjct: 72  QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 109

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
                    ++E +          I  LP   +   +R+  R S    + +  F+     
Sbjct: 110 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 160

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200
                   + +I         +V     D+    +++
Sbjct: 161 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 190


>gi|313159246|gb|EFR58615.1| adenylate kinase [Alistipes sp. HGB5]
          Length = 190

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 65/214 (30%), Gaps = 36/214 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSCGVDEFG 63
           I   G  G GK T    LK        +   T E          E  R +       +  
Sbjct: 4   IVLFGAPGCGKGTQAQRLKAHY---GIEHVSTGEVIRDEIRRGTELGRSMESYIKAGKLA 60

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   I   A        V      +G   + D F  ++          Q    D +  +
Sbjct: 61  PDQIVIGMIAN------YVAEHKHAKGC--IFDGFPRTTV---------QAEEFDKI--L 101

Query: 124 SVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEK----RRQIF 177
           +   +  D  I + +P +  ++R+  + + S R     +   R  + ++ +        +
Sbjct: 102 AGHGLQVDIMIDIHVPEEELIQRILLRGKDSGRADDASEEVIRGRLDVYRQQTAVVSDYY 161

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              A     +   V+   +   V   I +++ +L
Sbjct: 162 ---AAQ--GKYASVNGTGTMDDVFARITDVIAQL 190


>gi|312198201|ref|YP_004018262.1| sulfate adenylyltransferase large subunit [Frankia sp. EuI1c]
 gi|311229537|gb|ADP82392.1| sulfate adenylyltransferase, large subunit [Frankia sp. EuI1c]
          Length = 642

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 69/210 (32%), Gaps = 47/210 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T  +L+++ L  + +  +                 LL       G   
Sbjct: 466 IWFTGLSGAGKSTIANLVEKKLHDEGFHTY-----------------LLDGDNVRHGLNK 508

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     A R++++     V +     G I+L      S  +            LD+ + I
Sbjct: 509 DLGFTEADRVENIRRIAEVAKLMADAGLIVLT-----SFISPFRAERQLARDLLDNGEFI 563

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V          +D P+ +   R +     +           ++         +   A +
Sbjct: 564 EVH---------VDTPLHVAEARDRKGLYAKARRG-------ELANFTGIDSPYE--APH 605

Query: 184 QPDRCHIVDSAHSF--QSVATNILNIVWEL 211
            P+    +D++ +   +  A  ++  + + 
Sbjct: 606 NPE--IHLDASGTIPAEQGAEQVVTYLRDA 633


>gi|238917058|ref|YP_002930575.1| guanylate kinase [Eubacterium eligens ATCC 27750]
 gi|238872418|gb|ACR72128.1| guanylate kinase [Eubacterium eligens ATCC 27750]
          Length = 209

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 31/179 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL +   G  GAGK T +  L       +  +   TR+P         R        
Sbjct: 1   MSKGLLLVISGFSGAGKGTVMKRLLELHDEYSLSISATTRKP---------REGEADGRE 51

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLF 116
             F    E     A        +I  A   G       +  +  AY   Q ++ ++  L 
Sbjct: 52  YFFKTVEEFEKMIAEDA-----LIEHAQYVGN------YYGTPKAYVEEQLDKGNNVILE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIG--LKRVQNRYSLRESACLDYF-----ERKDVM 168
           ++    ++++ + PD  ++   P       KR++ R +  E+           E + V 
Sbjct: 101 IEIQGAMNIKRMFPDAVLMFITPPSAAELEKRLRGRGTEDEATIKARLSRAAEEAEGVE 159


>gi|299143967|ref|ZP_07037047.1| guanylate kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518452|gb|EFI42191.1| guanylate kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 205

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 39/215 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M++G  +   G  G+GK T    L     + ++     TR P                  
Sbjct: 1   MSAGFLLVLSGPSGSGKGTVSQALMSRNNKISFSTSVTTRTPRPNEVNGENYFFTTIEEF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++     E + +A    ++    +  +   + +G+I+L +  +D   A Q +    +   
Sbjct: 61  EDMVKNDELLEYAFVHTNYYGTPKKFVFSEIEKGEIVLLE--IDVQGALQVKEKYKEA-- 116

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                             I  LP   D    R+  R +  E      F        E   
Sbjct: 117 ----------------VFIFLLPPTMDELKSRLIKRDTETEEEINTRF---KNAFRE--- 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
              LD      D   +    ++ +    +I NI+ 
Sbjct: 155 ---LDFVGEY-DYFVV---NNTVEQAVIDIENIIE 182


>gi|294786432|ref|ZP_06751686.1| adenylate kinase (ATP-AMP transphosphorylase) [Parascardovia
           denticolens F0305]
 gi|315225994|ref|ZP_07867782.1| adenylate kinase [Parascardovia denticolens DSM 10105]
 gi|294485265|gb|EFG32899.1| adenylate kinase (ATP-AMP transphosphorylase) [Parascardovia
           denticolens F0305]
 gi|315120126|gb|EFT83258.1| adenylate kinase [Parascardovia denticolens DSM 10105]
          Length = 189

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 80/206 (38%), Gaps = 29/206 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G +G GK T  +LL +           T         +  R+ L +    E G +A+A +
Sbjct: 7   GPQGVGKGTQAALLAQHY---GIPAIST--------GDIFRYNLKNQ--TELGKQAQAFM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               + + V + +  A+++ ++ +     D+   +  +        +++L  I      P
Sbjct: 54  ---DKGELVPDQLTNAIVKDRLAM----DDAKQGWILDGYPRNAAQVEALDSILTDLCTP 106

Query: 131 -DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDIARNQPDR 187
            D  + L    D+ ++R+  R  + E    D  E   K + ++ K  +  L I     +R
Sbjct: 107 LDRVVALHADHDVLMERMTKRAEI-EGRADDTPEVIAKRLDVYAKETEPLLAI---YKER 162

Query: 188 CHI--VDSAHSFQSVATNILNIVWEL 211
             +  VD       ++  I++ + ++
Sbjct: 163 GLLLSVDGVGRIDEISRTIISQLDQV 188


>gi|270158016|ref|ZP_06186673.1| cell division protein FtsY [Legionella longbeachae D-4968]
 gi|289163717|ref|YP_003453855.1| Cell division protein FtsY homolog [Legionella longbeachae NSW150]
 gi|269990041|gb|EEZ96295.1| cell division protein FtsY [Legionella longbeachae D-4968]
 gi|288856890|emb|CBJ10701.1| Cell division protein FtsY homolog [Legionella longbeachae NSW150]
          Length = 350

 Score = 40.8 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 22/127 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  Q++   V +    G T  A A   +L+    ++    A    
Sbjct: 153 GVNGAGKTTTIGKLAKQFQQQGKKVMLAA--GDTFRAAAVEQLLVWGERNDIPVIA---- 206

Query: 71  FAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--S 124
                  H      +VI  AL   K     R +D   A    R  +Q   ++ L+++   
Sbjct: 207 ------QHTGADSASVIFDALQAAKA----RKMDVLIADTAGRLHTQSNLMEELKKVKRV 256

Query: 125 VQEVMPD 131
           +Q++ PD
Sbjct: 257 LQKLSPD 263


>gi|330995569|ref|ZP_08319471.1| hypothetical protein HMPREF9442_00532 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329575297|gb|EGG56844.1| hypothetical protein HMPREF9442_00532 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 343

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 91  MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 144

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 145 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 183

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 184 DDAERMIATEDVKPD-VVFFDMP 205


>gi|295135481|ref|YP_003586157.1| deoxyadenosine kinase [Zunongwangia profunda SM-A87]
 gi|294983496|gb|ADF53961.1| deoxyadenosine kinase [Zunongwangia profunda SM-A87]
          Length = 243

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 34/190 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   LL +         H   EP      E          ++ +    +     +
Sbjct: 49  GAGKTTLTRLLAK---------HYKWEPHYEDVLENPYLEDFYNKMERWSFNLQIYFLNS 99

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSS--------YAYQGERDSSQHLFLDSLQEI 123
                    I      GK ++ DR  + D+               RD   +  L  L E 
Sbjct: 100 RFRQ-----ILQIRESGKKIIQDRTIYEDAYIFAPNLHAMGLMTNRDFENYRSLFELMES 154

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V+   PD  I L   +   + ++Q R    E++         +    +  + +     +
Sbjct: 155 VVKG--PDLLIYLRSSIPNLVAQIQKRGRDYENSI-------SIDYLSRLNERYEAWVHD 205

Query: 184 -QPDRCHIVD 192
                  IVD
Sbjct: 206 YDKGNLLIVD 215


>gi|170764265|ref|ZP_02639850.2| guanylate kinase [Clostridium perfringens CPE str. F4969]
 gi|170714271|gb|EDT26453.1| guanylate kinase [Clostridium perfringens CPE str. F4969]
          Length = 215

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ I   G  GAGK T    L          V   TR P          H L      
Sbjct: 8   NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRSPRVGEVDGVNYHFLTKEEFK 67

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +  AE + +       +H E          + +   L EGK ++                
Sbjct: 68  QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 105

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
                    ++E +          I  LP   +   +R+  R S    + +  F+     
Sbjct: 106 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 156

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200
                   + +I         +V     D+    +++
Sbjct: 157 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 186


>gi|156085753|ref|XP_001610286.1| UMP-CMP kinase [Babesia bovis T2Bo]
 gi|154797538|gb|EDO06718.1| UMP-CMP kinase, putative [Babesia bovis]
          Length = 204

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 75/220 (34%), Gaps = 44/220 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAE---AARHVLLSCGVD 60
             I+  G  G+GK+T    + R    K+       RE    P ++     R  + +  V 
Sbjct: 7   KIITVAGPPGSGKSTMSERMVRAFGFKHISAGECLREEMANPNSKNQQLIRSYIDAGKVI 66

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E ++            +       +I++ D F           D+ +   L   
Sbjct: 67  PVEITIELLL----------KKMESYGWGREIVIIDGFP-------RNADNVKGWALRMA 109

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--- 177
               +  +     +  D P+++  +R+  R +  E A  D        I  + +  +   
Sbjct: 110 HNTELVHM-----LSFDCPMEVCRERIIARIN--ECARTD---NATAAIENRMKVYYDDT 159

Query: 178 ------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                 L +A     +C ++++A + ++V   I+ ++  L
Sbjct: 160 MPIIHSLIMA----GKCTVLNAAGTKEAVWDEIVKVLANL 195


>gi|18312804|ref|NP_559471.1| adenylate kinase [Pyrobaculum aerophilum str. IM2]
 gi|23821789|sp|Q8ZWP7|KADA_PYRAE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|18160289|gb|AAL63653.1| adenylate kinase [Pyrobaculum aerophilum str. IM2]
          Length = 197

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 84/221 (38%), Gaps = 40/221 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I    + G+GKTT ++ +K+ L     DV +     G    E A+        DE   + 
Sbjct: 3   IVIVALPGSGKTTILNFVKQKLP----DVKIVNY--GDVMLEIAKKRFGIQHRDEMRKKI 56

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +   + +  E +   A + G +++       ++A             D +    + 
Sbjct: 57  PVDEYRKVQEEAAEYI---ASLTGDVII------DTHASIKIGGGYYPGLPDRI----IS 103

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE----RKDVMIHEKRRQIFLDIAR 182
           ++ PD  ++L+    + L+R +           D F      +++ +H++  + +   A 
Sbjct: 104 KLKPDVILLLEYDPKVILERRKK--------DPDRFRDLESEEEIEMHQQANRYYAFAAA 155

Query: 183 NQPDR-CHIVD-----SAHSFQ--SVATN-ILNIVWELVQK 214
           N  +   H+++      +  F+   VA   I+N++    QK
Sbjct: 156 NAGESTVHVLNFRGKPESRPFEHAEVAAEYIVNLILRTRQK 196


>gi|306836207|ref|ZP_07469191.1| shikimate kinase [Corynebacterium accolens ATCC 49726]
 gi|304567928|gb|EFM43509.1| shikimate kinase [Corynebacterium accolens ATCC 49726]
          Length = 179

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 72/209 (34%), Gaps = 49/209 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G  GAGK+T    L   L     D  ++     G P  E     + S   +    E
Sbjct: 16  VVLIGPPGAGKSTIGRRLSHALNCDLVDSDYLIEMAEGKPCGE-----VFSEKGEPAFRE 70

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA        +HV      AL +G ++       S     G          + L+  + 
Sbjct: 71  LEA--------EHVA----AALQKGGVV-------SL----GGGAVMTASTRELLERHT- 106

Query: 126 QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                   + LD+  + G +R    +NR  L     ++++      I E RR  +L++A 
Sbjct: 107 -------VVFLDISAEEGARRTAGDRNRPVLAADNPVEHY----RSIVETRRPFYLEVAD 155

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               R    D   S Q V  +IL  +  L
Sbjct: 156 ---FRVRT-D-TRSPQQVVGDILGFLETL 179


>gi|83859868|ref|ZP_00953388.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852227|gb|EAP90081.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Oceanicaulis alexandrii HTCC2633]
          Length = 632

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L++R L       +                  L       G   + 
Sbjct: 464 FTGLSGAGKSTIANLVERKLAEAGRHTYS-----------------LDGDNVRHGLNKDL 506

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +  +  G I+ C     S  +            +D  + I  
Sbjct: 507 GFTDVDRVENIRRIGEVAKLFVDAGLIVTC-----SFISPFRSERQMVRELVDEAEFIE- 560

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P+++ ++R
Sbjct: 561 --------IFVDAPLEVCMQR 573


>gi|34556623|ref|NP_906438.1| hypothetical protein WS0175 [Wolinella succinogenes DSM 1740]
 gi|34482337|emb|CAE09338.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 288

 Score = 40.4 bits (94), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 64/200 (32%), Gaps = 33/200 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
             + I  EG +GAGK   I  L   L  +   V   ++P                 ++E 
Sbjct: 52  KKIIIILEGRDGAGKGGTIKALTEHLNPRGARVVALQKPSDVEKT----QWYFQRYINEL 107

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E + F   R  +    +   +       C       + YQ          + +L++
Sbjct: 108 PVGGEIVFF--DRSWYNRAGVEKVMG-----FCTNEQYKEFIYQ----------VPNLEQ 150

Query: 123 ISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLD 179
           + +            LD+  +  LKR++ R +       L   + K + + ++  + F  
Sbjct: 151 MLLGSGF--LVFKYFLDVGQEEQLKRIERRKTDPLRMWKLSPIDEKSLGLWDEYTEAFQK 208

Query: 180 IARN-----QPDRCHIVDSA 194
           +         P    ++DS 
Sbjct: 209 MFARTHTPYAP--WVVIDSN 226


>gi|328463759|gb|EGF35326.1| hypothetical protein AAULH_12151 [Lactobacillus helveticus MTCC
           5463]
          Length = 183

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 14/109 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCG 58
           M+ G  I  +GI  +GKTT  + L + L    Y +     R        E   ++L    
Sbjct: 1   MSRGKIILIDGISNSGKTTLCNNLSKQL---GYKIVPESIRYL-ENRLNEKGDNILYVPK 56

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPAL---MEGKILLCDRFLDSSYA 104
             +     + I+F     D   +    A      G+ ++ D+   S  A
Sbjct: 57  NIQEELRNQEILF-----DLEFDKWFDANYFADHGQNVVIDKSPYSIVA 100


>gi|290958713|ref|YP_003489895.1| hypothetical protein SCAB_42791 [Streptomyces scabiei 87.22]
 gi|260648239|emb|CBG71348.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 189

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 44/146 (30%), Gaps = 26/146 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK+T   LL   L      VH+  +              L    ++     
Sbjct: 2   IVLTGPPGAGKSTVAQLLADHLT---PSVHLHSDDFWRSIKRGWIAPYLPEAHEQNQVVL 58

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           + +V AA                G  ++CD                   F+D  +  + +
Sbjct: 59  QVLVSAAF----------GYAEGGYQVICD-------------GIVGPWFIDFFRVTARE 95

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYS 152
             +P   +IL       L+R  +R  
Sbjct: 96  RALPLSYVILRPDKHTTLERATSRAG 121


>gi|229161457|ref|ZP_04289438.1| uridine kinase [Bacillus cereus R309803]
 gi|228621994|gb|EEK78839.1| uridine kinase [Bacillus cereus R309803]
          Length = 186

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 42/220 (19%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN     I+   + G GKTT    L   L      ++          A+  + +      
Sbjct: 1   MNKNTKIITIAAVSGGGKTTVTESLTHKLTNS-KALYFDSYYFDNCPADICKWI-----D 54

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D    +   +      + H+   IR + ++  I+      D  +AY              
Sbjct: 55  DGANYDEWVLTPLIHDIQHL---IRDSNIDYIIV------DYPFAY-------------- 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L     Q +  D TI +D P+DI + R   R        +D             R+ +L+
Sbjct: 92  LNSEMRQFI--DVTIFIDTPLDIAMARRILR--DFNEGTIDEIHNDLKHYMTFARKAYLE 147

Query: 180 IA---RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                ++  D   ++D + S + +   I   + EL +++V
Sbjct: 148 AIHTVKSNSD--IVLDGSLSVKEI---IDRTLEELNRRKV 182


>gi|57526531|ref|NP_001002743.1| thymidine kinase 2, mitochondrial [Danio rerio]
 gi|49901472|gb|AAH76441.1| Thymidine kinase 2, mitochondrial [Danio rerio]
          Length = 228

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 40/189 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--------GGTPAAEAARHVLLSCG 58
           I  EG   +GKTT +    +     + +V    EP        G  P       +     
Sbjct: 22  ICLEGNIASGKTTCLEYFSKT---SDIEVLT--EPVSKWRNVQGCNPLGL----MYQDPT 72

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDS 111
                 +    +    R  HV  +  P      I + +R + S       +    G+   
Sbjct: 73  RWGLTLQTYVQLTMLDR--HVSPMSAP------IRMMERSIYSAKYIFVENLYKSGKMPE 124

Query: 112 SQHLFL-DSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER---- 164
                L +  + I     +P D  + L        +R++ R    E    L+Y E     
Sbjct: 125 VDFAVLSEWFEWIIKNISLPVDLIVYLQTSPQTCYERLKQRCREEEKVIPLEYLESIHNL 184

Query: 165 -KDVMIHEK 172
            +D +IH+K
Sbjct: 185 YEDWLIHQK 193


>gi|118389916|ref|XP_001028003.1| hypothetical protein TTHERM_00498150 [Tetrahymena thermophila]
 gi|89309773|gb|EAS07761.1| hypothetical protein TTHERM_00498150 [Tetrahymena thermophila
           SB210]
          Length = 547

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 2/100 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEFGAE 65
           I   G   AGKT+ + LL   L+ + ++V    E     A       +       +   +
Sbjct: 115 ICITGGPCAGKTSGLVLLSEKLRDEGFNVFTVPEAATMIANGGGMIDMSHYDDTQQINFQ 174

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
              +       D    + + +     ++LCDR L    AY
Sbjct: 175 KALMKTQVQLEDSFHGIAKLS-NRKSVILCDRGLMDGSAY 213


>gi|297661751|ref|XP_002809387.1| PREDICTED: guanylate kinase-like isoform 2 [Pongo abelii]
          Length = 263

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 71/223 (31%), Gaps = 41/223 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M+    +   G  GAGK+T +  L +       + V H TR P                G
Sbjct: 67  MSGPRPVVLSGPSGAGKSTLLKRLFQEHSGIFGFSVSHTTRNPRPGE----------ENG 116

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D +    E +     R     + I  A   G +     +  S  A Q  +  ++   LD
Sbjct: 117 KDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRICVLD 167

Query: 119 S----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                ++ I   ++ P   I + + P    +  +R++ R +  E +           +  
Sbjct: 168 VDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRRRNTETEESLAKRLAAAQADME- 223

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                    +  +P    +V    S       +   + E ++K
Sbjct: 224 ---------SSKEPGLFDVVIVNDSLDQAYAELKEALSEEIKK 257


>gi|256811468|ref|YP_003128837.1| PilT protein domain protein [Methanocaldococcus fervens AG86]
 gi|256794668|gb|ACV25337.1| PilT protein domain protein [Methanocaldococcus fervens AG86]
          Length = 637

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           M  G+F+S  G  G+GK+T ++ L  F + +   V     P     ++  
Sbjct: 278 MAEGIFVS--GPPGSGKSTFVAALAEFYKSQGKIVKTMESPRDLQVSKEI 325


>gi|302533837|ref|ZP_07286179.1| dephospho-CoA kinase [Streptomyces sp. C]
 gi|302442732|gb|EFL14548.1| dephospho-CoA kinase [Streptomyces sp. C]
          Length = 200

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 74/217 (34%), Gaps = 34/217 (15%)

Query: 11  GIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           GI GAGK+    LL  +        R   +V     PG     EA    +L+        
Sbjct: 9   GI-GAGKSEVSRLLAGYGAVVVDADRIAREVVEPGTPGLAAVVEAFGDSVLTADGRLDRP 67

Query: 65  EAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              A+VF+  A+L  +  ++ P             + +  A   E      + +  +  +
Sbjct: 68  RLGAVVFSDPAKLQTLNAIVHPL------------VGARSAELEEAAGPDAIVVHDVPLL 115

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   + P  D  +++D   D  L R+  R  + E               +  R+  L +A
Sbjct: 116 TENGLAPLYDLVVVVDAAPDTQLARLTARRGMTEDEARARMAA------QATREQRLAVA 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
                   ++D+    +++   +  +  EL  +  + 
Sbjct: 170 T------LVIDNDGPLEALEPQVRKVWAELTARAAAE 200


>gi|302683622|ref|XP_003031492.1| hypothetical protein SCHCODRAFT_68690 [Schizophyllum commune H4-8]
 gi|300105184|gb|EFI96589.1| hypothetical protein SCHCODRAFT_68690 [Schizophyllum commune H4-8]
          Length = 1223

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 13/89 (14%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA- 66
           +  G  G+GKTT +++L R ++  N  V    E  G+P   +  +  ++           
Sbjct: 39  AILGSSGSGKTTLLNILSRRMRSSNLTVAGLVEFNGSPKLSSISNAYVTQMDLLLPTLTV 98

Query: 67  -EAIVFAAA-----------RLDHVENVI 83
            E +++AAA           R   VE +I
Sbjct: 99  RETLLYAAALRLPASTNAEKRKQLVEEII 127


>gi|225868142|ref|YP_002744090.1| dephospho-CoA kinase [Streptococcus equi subsp. zooepidemicus]
 gi|225701418|emb|CAW98515.1| dephospho-CoA kinase [Streptococcus equi subsp. zooepidemicus]
          Length = 197

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 80/215 (37%), Gaps = 39/215 (18%)

Query: 11  GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60
           GI G   +GK+T ++L+++    +   +  VH  ++ GG             +LL  G  
Sbjct: 6   GITGGIASGKSTAVALIRQAGYQVIDADQVVHELQKKGGKLYQVLLETFGQDILLPSGQL 65

Query: 61  EFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +    AE +       A        +IR AL + K  L           Q E      L 
Sbjct: 66  DRPKLAELLFAHSENMAKSSQQQNAIIREALAKQKEELS----------QTEAIFFMDLP 115

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L  L E+  Q+   D   +L +  +  LKR+  R  L E A       +  M  ++    
Sbjct: 116 L--LVELGYQDWF-DAIWLLYVDEETQLKRLMKRNQLTELAARRRIASQLPMSQKR---A 169

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + D+         ++D+    Q++ T I   + +L
Sbjct: 170 YADL---------VIDNTGDLQALETQISKALHDL 195


>gi|117619153|ref|YP_854661.1| putative kinase [Aeromonas hydrophila subsp. hydrophila ATCC
          7966]
 gi|117560560|gb|ABK37508.1| putative kinase [Aeromonas hydrophila subsp. hydrophila ATCC
          7966]
          Length = 168

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 19/92 (20%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          + I F G+ G+GK+T    L + L      +            +A R        +E G 
Sbjct: 1  MLIIFSGLPGSGKSTIARALAQRLGAVYLRI--------DTIEQAIRDA--ERTAEEMGP 50

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              + +  AR           L  G  ++ D
Sbjct: 51 AGYFVAYGLAR---------ENLKLGSTVITD 73


>gi|312199338|ref|YP_004019399.1| sulfate adenylyltransferase large subunit [Frankia sp. EuI1c]
 gi|311230674|gb|ADP83529.1| sulfate adenylyltransferase, large subunit [Frankia sp. EuI1c]
          Length = 644

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 34/146 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T  +L+++ L  + +  +                 LL       G   
Sbjct: 466 IWFTGLSGAGKSTIANLVEKKLHDEGFHTY-----------------LLDGDNVRHGLNK 508

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     A R++++     V +     G I+L      S  +            LD+ + I
Sbjct: 509 DLGFTEADRVENIRRIAEVAKLMADAGLIVLT-----SFISPFRAERQLARDLLDNGEFI 563

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN 149
            V          +D P+ +   R + 
Sbjct: 564 EVH---------VDTPLHVAEARDRK 580


>gi|212696361|ref|ZP_03304489.1| hypothetical protein ANHYDRO_00898 [Anaerococcus hydrogenalis DSM
          7454]
 gi|212676639|gb|EEB36246.1| hypothetical protein ANHYDRO_00898 [Anaerococcus hydrogenalis DSM
          7454]
          Length = 140

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT ++L+  FL+  + ++++
Sbjct: 50 KGKFYTLLGPSGCGKTTILNLIAGFLEANSGEIYI 84


>gi|126506320|ref|NP_001075436.1| sperm adenylate kinase [Strongylocentrotus purpuratus]
 gi|90902165|gb|ABE01882.1| sperm adenylate kinase [Strongylocentrotus purpuratus]
          Length = 920

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 65/218 (29%), Gaps = 48/218 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  G+GK T  + +    Q              V    E       ++   ++ + G+ +
Sbjct: 120 GGPGSGKGTQCAKIAERYQGYIHLSLGTALRRKVAKFLEDDSW---KSVADLIKTGGLVK 176

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E +        H    I   L +           ++    G         +   +
Sbjct: 177 DDDTYEIL-------QH---KIEKKLKK---------YPTTL---GFIIEGFPRTMSQAK 214

Query: 122 EISVQEVMPDCTIILDLPVDIGLK-RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
               +   PD  I LD   ++ LK R++ R    E       + K+  +  +R + F + 
Sbjct: 215 LFQDKYGTPDLVISLDCD-EVRLKYRLEKRKDTSERE-----DDKEEDVVARRLEAFREQ 268

Query: 181 -------ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                     +      V++      V  ++ N++  L
Sbjct: 269 TLPVVTHYNAKDGLLRGVNADRDEDEVFFDVANMIDSL 306


>gi|313903131|ref|ZP_07836525.1| Adenylate kinase [Thermaerobacter subterraneus DSM 13965]
 gi|313466633|gb|EFR62153.1| Adenylate kinase [Thermaerobacter subterraneus DSM 13965]
          Length = 216

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 69/232 (29%), Gaps = 58/232 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE--A 66
           F G  GAGK T  + L +   R       T         +  R  +         A+   
Sbjct: 5   FLGPPGAGKGTQAARLAQ---RAGVPQIAT--------GDMFRAAVREGTPLGLEAKRYM 53

Query: 67  EAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           EA      ++      E + +P   +G   L D F          R   Q   L+ +  +
Sbjct: 54  EAGQLVPDQVTLGLVRERLAQPDCRKGF--LLDGF---------PRTVPQAEGLNEV--L 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFE----------------RK 165
           +      D  +  D+P  + ++R+  R             FE                ++
Sbjct: 101 AGLGARLDGVLYFDVPDAVVVERLSGRRVCPACGATYHVRFEPPQVEGRCDRCGAELVQR 160

Query: 166 DVMIHEKRRQIFLDIARNQPD---RC-------HIVDSAHSFQSVATNILNI 207
                E  RQ  L + R Q +   R        H VD+     +V   I  I
Sbjct: 161 SDDREETVRQR-LAVYRQQTEPLVRYYREAGLLHTVDAGRPIDAVEAEIARI 211


>gi|195611658|gb|ACG27659.1| adenylate kinase [Zea mays]
          Length = 284

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 63/238 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
             G   +GK T   L+K   Q  +               +  R  + +   +   A+   
Sbjct: 72  ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 118

Query: 69  IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 +   V + I          +P   E    L D +  S          SQ + L+
Sbjct: 119 ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 165

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164
           +L+      + PD  I+LD+P ++ ++RV  R                           +
Sbjct: 166 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 219

Query: 165 KDVMIHEKRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +     EK +   + + +    +     +    V    +  +V   I  ++  +++K+
Sbjct: 220 RFDDTEEKVKLRLETYYENIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 277


>gi|312196661|ref|YP_004016722.1| sulfate adenylyltransferase large subunit [Frankia sp. EuI1c]
 gi|311227997|gb|ADP80852.1| sulfate adenylyltransferase, large subunit [Frankia sp. EuI1c]
          Length = 642

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 34/146 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T  +L+++ L  + +  +                 LL       G   
Sbjct: 466 IWFTGLSGAGKSTIANLVEKKLHDEGFHTY-----------------LLDGDNVRHGLNK 508

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     A R++++     V +     G I+L      S  +            LD+ + I
Sbjct: 509 DLGFTEADRVENIRRIAEVAKLMADAGLIVLT-----SFISPFRAERQLARDLLDNGEFI 563

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN 149
            V          +D P+ +   R + 
Sbjct: 564 EVH---------VDTPLHVAEARDRK 580


>gi|164687807|ref|ZP_02211835.1| hypothetical protein CLOBAR_01451 [Clostridium bartlettii DSM
           16795]
 gi|164603082|gb|EDQ96547.1| hypothetical protein CLOBAR_01451 [Clostridium bartlettii DSM
           16795]
          Length = 207

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 52/167 (31%), Gaps = 26/167 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL +   G  GAGK T    L +        V   TR P        + + L     +
Sbjct: 4   KKGLLLVISGPSGAGKGTVCKELLKRNPDFKLSVSATTRAPREGEVDGESYYFLTKEKFN 63

Query: 61  EF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           E    G   E     +      +  +   L EGK ++ +         QG R        
Sbjct: 64  EMIGQGGFLEYAQIYSNFYGTPKGPVMKYLEEGKDVILE------IEMQGARQ------- 110

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                  V+E+ P+  +I  LP   +    R+  R +  +    +  
Sbjct: 111 -------VKEMYPEAVLIFVLPPSLEELRNRLTTRGTETQEQVNERL 150


>gi|16077082|ref|NP_387895.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221307823|ref|ZP_03589670.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312145|ref|ZP_03593950.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317078|ref|ZP_03598372.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321341|ref|ZP_03602635.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|586859|sp|P37529|DCK_BACSU RecName: Full=Deoxyadenosine/deoxycytidine kinase; Short=dAK/dCK
 gi|467404|dbj|BAA05250.1| unknown [Bacillus subtilis]
 gi|2632281|emb|CAB11790.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 217

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 34/220 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    +   +  E    P  E   H       + +    
Sbjct: 12  ITVAGTVGVGKSTLTKTLAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119
           +   F A R        +     G   + DR  + D+       A +G      +    S
Sbjct: 63  QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTS 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175
           L E   ++     PD  I L+  ++  L R++ R    E      Y+E     +H +   
Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWE----EMHTRYEN 173

Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               F    + + + +   +++  +S +++   I +++ +
Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHD 213


>gi|293373500|ref|ZP_06619855.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
 gi|292631638|gb|EFF50261.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
          Length = 349

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 97  MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 150

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 151 ---HEMGLINSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 189

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 190 DDAERMIATEDVKPD-VVFFDMP 211


>gi|148977003|ref|ZP_01813649.1| Type IV secretory pathway, VirD4 component [Vibrionales bacterium
           SWAT-3]
 gi|145963663|gb|EDK28924.1| Type IV secretory pathway, VirD4 component [Vibrionales bacterium
           SWAT-3]
          Length = 498

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 5/120 (4%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEFGA-E 65
            +G  GAGK+  I  L R+++ +     +  +     +   E  + V+L+   +   A +
Sbjct: 2   IDGTTGAGKSVAIRKLLRWIRARGDKAIIYDKGCDFVSKFYEPHKDVILNPFDERCAAWD 61

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +    A   + +   + P   EG    +   R + ++  YQ   D      +++L  I
Sbjct: 62  IWSDAKEAPDFESLAAALIPQHGEGDPFWVDSARTIFAATTYQMMIDDKHECTIENLLHI 121


>gi|91792146|ref|YP_561797.1| hemin importer ATP-binding subunit [Shewanella denitrificans OS217]
 gi|123357090|sp|Q12R52|HMUV_SHEDO RecName: Full=Hemin import ATP-binding protein HmuV
 gi|91714148|gb|ABE54074.1| ABC transporter related [Shewanella denitrificans OS217]
          Length = 254

 Score = 40.4 bits (94), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 48/225 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  GAGK++ +  L + L+ ++ ++   ++P G  P AE AR +           ++ ++
Sbjct: 34  GPNGAGKSSLLKALCQSLKTESGEISFYQQPLGQWPKAELARCL-------AVLPQSSSL 86

Query: 70  VFAAARLDHVENVIRP---ALMEGKILLCD---RFLDSSYAYQGE-----RDSSQHLFLD 118
            F     + V   + P   +   GK L+     R   S  A Q        +  +     
Sbjct: 87  SFGFTVEEVVALGLYPLTISQQAGKALVASQLARLDLSPLANQAYPSLSGGEKQRVHLAR 146

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177
            L +++     P   ++LD      L   Q    L  +  L          H    Q + 
Sbjct: 147 VLTQLAQAPRAP--LLLLD-EPTSALDLAQQHKVLTLAREL---------AHS---QGYG 191

Query: 178 -------LDIARNQPDRCHIVDSA-----HSFQSV-ATNILNIVW 209
                  L+ A    D   ++++       S Q V   + L+ VW
Sbjct: 192 VIVVLHDLNQAARYADNIVVINNGEIVKQGSPQQVLTKDTLSQVW 236


>gi|327396888|dbj|BAK14254.1| putative thymidine kinase [Red sea bream iridovirus]
          Length = 210

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 30/202 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK++ +  L         +V +  EP  T                +    A A     
Sbjct: 31  GVGKSSLLRSLAN--THHGINVVL--EPTDTW------EPFFQLYCKDPARWAAAFQMM- 79

Query: 74  ARLDHVENVIRPALMEGKI-LLCDRF---LDSSYAYQGERDSSQHLFLDSLQ-EISVQEV 128
             + H    I  A  +  +  + +R      +  A+         +  D++   ++    
Sbjct: 80  --VIHSYRNIYSANKDNPLPTIIERSPQCCRAFVAWLYATGQLDTVSHDTINTHLAAVPW 137

Query: 129 MPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
             + T + L     +   R   R +   S   DY          K+ +     AR  PD 
Sbjct: 138 FSNVTQVYLRCSPTVAAARALARPNELNSCPPDYM-----AFLHKQWE-----ARVTPDT 187

Query: 188 CHIVDSAHSFQSVATNILNIVW 209
             I+D+  +  +V    + ++ 
Sbjct: 188 I-IIDAEQNMDTVRRQFIELLH 208


>gi|226226300|ref|YP_002760406.1| adenylate kinase [Gemmatimonas aurantiaca T-27]
 gi|259494004|sp|C1A6S6|KAD_GEMAT RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|226089491|dbj|BAH37936.1| adenylate kinase [Gemmatimonas aurantiaca T-27]
          Length = 214

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 69/240 (28%), Gaps = 63/240 (26%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  GAGK T    L   L     DV            +  R  +         A
Sbjct: 1   MIIVLLGPPGAGKGTQGERLAARL-----DV------PKIATGDVLRAAVKEGTPLGLEA 49

Query: 65  EAEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---- 119
           +A     A  R D V + VI   + E           +  A    + +     + +    
Sbjct: 50  KA-----AMDRGDLVPDAVIMGIMKE-----------ALAAPSAAKGAILDGVVRTTPQA 93

Query: 120 --LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL----------------- 159
             L ++ V    P D  ++ ++  D  ++R+  R +                        
Sbjct: 94  AGLNDMLVALGRPLDAVLLFEVDEDELVRRLSGRTTCEACQRPFFGRQPGETCTEGGVSG 153

Query: 160 ---DYFERKDVMIHEKRRQIFLD-------IARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                 + +   I ++  +++ +                  VD+  + + V   +L+ + 
Sbjct: 154 TLVRRKDDEPEAIRKRM-EVYREQTSPVIHWYEKSGANLVRVDAIGTLEEVEGRVLSALR 212


>gi|301299480|ref|ZP_07205754.1| ATPase, AAA family [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852914|gb|EFK80524.1| ATPase, AAA family [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 246

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62
           FEG  G GKTT   ++ R            V  T+  E  G    +      LS  ++E 
Sbjct: 59  FEGPPGTGKTTVARIVARLFYALGILENTTVVETKRNELEGKWVGD------LSGKINEK 112

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
              A   V        + N   P   +GK ++
Sbjct: 113 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 143


>gi|284165526|ref|YP_003403805.1| adenylate kinase [Haloterrigena turkmenica DSM 5511]
 gi|284015181|gb|ADB61132.1| adenylate kinase [Haloterrigena turkmenica DSM 5511]
          Length = 215

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 52/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + +       + D   T         +A R       + +   E 
Sbjct: 6   ILILGAPGAGKGTQSARITEEF---DVDHITT--------GDALRGN-KDMDISDMDTEY 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +       R + V + +  A++E  +   D F+   Y     R+  Q   L+ + ++   
Sbjct: 54  DTPREYMDRGELVPDAVVNAIVEEALSQADGFVLDGY----PRNLEQAEELEGMTDL--- 106

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------------------RKDVM 168
               D  ++LD+  +  + R+  R    E     + E                  ++D  
Sbjct: 107 ----DLALMLDVSQEELVDRLTGRRVCSECGTNYHVEYDQPEEEGVCDECGGELIQRDDD 162

Query: 169 IHEKRRQIFLDIARNQPDRCH----------IVDSAHSFQSVATNILNIVWEL 211
             E  R+  L++ R   +              VD   +   V  ++   + + 
Sbjct: 163 TEETVRER-LEVYRENTEPVIEHYEEQGDLERVDGERAPDEVWADVKATIEDA 214


>gi|260101902|ref|ZP_05752139.1| deoxyguanosine kinase [Lactobacillus helveticus DSM 20075]
 gi|260084291|gb|EEW68411.1| deoxyguanosine kinase [Lactobacillus helveticus DSM 20075]
 gi|328464069|gb|EGF35556.1| deoxyguanosine kinase [Lactobacillus helveticus MTCC 5463]
          Length = 228

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++  S+L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113
           +  A +     L+   + I+ AL E   +L DR +   +  +Q   D  +          
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106

Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
              H  ++ L+ +  +   PD  + +++  D  +KR++ R    E    D
Sbjct: 107 ELLHNMMNELERMPKKN--PDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 154


>gi|157164741|ref|YP_001467182.1| adenylate kinase [Campylobacter concisus 13826]
 gi|171855065|sp|A7ZEH4|KAD_CAMC1 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|112801355|gb|EAT98699.1| adenylate kinase (ATP-AMP transphosphorylase) [Campylobacter
           concisus 13826]
          Length = 189

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 43/222 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56
           M +   I   G  G+GKTT  SL+ +  ++  +    D+       G+   +     +  
Sbjct: 1   MKNLFLII--GAPGSGKTTDASLIAQHDEKFAHFSTGDLLRAEVASGSELGKLIDGFISK 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +        AIV A          I+ +      ++ D +  S      E+ +     
Sbjct: 59  GNLVPLDVVVNAIVSA----------IKSSNKSN--IIIDGYPRS-----VEQMTELDKV 101

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L    EIS++       I +D+  D+   RV  R    +             +   R ++
Sbjct: 102 LSEQDEISLKG-----VIEVDVSEDVARARVLGRARGADDNN---------EVFNNRMKV 147

Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +LD  +      ++ +  H+V+       +  +I N++ +L+
Sbjct: 148 YLDPIKPIRKFYSEKELLHVVNGERGIDEIVADIKNLLAKLI 189


>gi|45552805|ref|NP_995928.1| brown, isoform B [Drosophila melanogaster]
 gi|21428876|gb|AAM50157.1| GH12107p [Drosophila melanogaster]
 gi|45445379|gb|AAS64761.1| brown, isoform B [Drosophila melanogaster]
          Length = 328

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M +G  I+  G  GAGKTT ++ + + L+
Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84


>gi|15607112|ref|NP_214494.1| shikimate kinase [Aquifex aeolicus VF5]
 gi|7673950|sp|O67925|AROK_AQUAE RecName: Full=Shikimate kinase; Short=SK
 gi|2984356|gb|AAC07875.1| shikimate kinase [Aquifex aeolicus VF5]
          Length = 168

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 49/194 (25%)

Query: 15  AGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71
           +GK+T  SLL R L    YDV      RE    P        +     + +  + E    
Sbjct: 11  SGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQ-------IFEKKGEAYFRKLEF--- 60

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131
                     V++    +  +++                       ++L  +  +     
Sbjct: 61  ---------EVLKDLSEKENVVIST-------------GGGLGANEEALNFMKSRGT--- 95

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T+ +D+P ++ L+R +     +E   L     +   + E+RR+I+   ++        V
Sbjct: 96  -TVFIDIPFEVFLERCK---DSKERPLLKRPLDEIKNLFEERRKIY---SKAD----IKV 144

Query: 192 DSAHSFQSVATNIL 205
                 + V   IL
Sbjct: 145 KGEKPPEEVVKEIL 158


>gi|319948205|ref|ZP_08022364.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Dietzia cinnamea P4]
 gi|319438140|gb|EFV93101.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Dietzia cinnamea P4]
          Length = 636

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  S ++R L    +  +                 +L       G  A+   
Sbjct: 472 GLSGSGKSTIASEVERLLIESGHPAY-----------------ILDGDNLRHGLNADLGF 514

Query: 71  FAAARLDHVENVIRPA---LMEGKILLC 95
            A  R +++      A      G +++C
Sbjct: 515 SAEDRAENIRRTAEVAALFADAGVVVIC 542


>gi|313633101|gb|EFS00001.1| dephospho-CoA kinase [Listeria seeligeri FSL N1-067]
          Length = 209

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 30/213 (14%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60
           G+ G+   GK+T   ++++    L   +       E G    AE      + +LL+ G  
Sbjct: 15  GLTGSVATGKSTVSKMIQKAGIPLVDADIAARKVVERGTVGLAEIVAYFGKEILLADGSL 74

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A+ I     +   +  +  P + +   +L +R    +   +        LF   L
Sbjct: 75  NRAKLADIIFKNEDKRQKLNKITHPRVKD--YMLEERKRYFAMGEKVVFFDIPLLFESHL 132

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  Q V     +   +  +  LKR+  R +L++ A LD    + + I EK        
Sbjct: 133 ESLVDQIV----VVW--VTPETELKRLMERNNLKKEAALDRINSQ-MGIDEK-------- 177

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           A+       ++++  S +     +   +   V 
Sbjct: 178 AKKAD---FVINNNESLEKTEKQVSAFIDRFVN 207


>gi|270011806|gb|EFA08254.1| hypothetical protein TcasGA2_TC005882 [Tribolium castaneum]
          Length = 394

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 11/91 (12%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G+  +GKTT  + LK+F +    +VHV  E      A   ++   S    E    
Sbjct: 3  LIVVTGVPCSGKTTRSTELKQFFESHGKEVHVVSEFDQIIKANFEKNAFFSDAAAEKHIR 62

Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
          +            +++ +   + +  +++ D
Sbjct: 63 S-----------LLKSEVLKLITQKNVVILD 82


>gi|251790615|ref|YP_003005336.1| adenylate kinase [Dickeya zeae Ech1591]
 gi|247539236|gb|ACT07857.1| adenylate kinase [Dickeya zeae Ech1591]
          Length = 214

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 64/234 (27%), Gaps = 55/234 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +   +++       T         +  R  + +       A+ 
Sbjct: 3   IILLGAPGAGKGTQAQFI---MEKYGIPQIST--------GDMLRAAVKAGSELGKQAKE 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                     + V  +++  + +                 G         +     +   
Sbjct: 52  IMDAGKLVTDELVIALVKERIAQDD------------CRNGFLLDGFPRTIPQADAMKDA 99

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-----------------------------SLRESA 157
            +  D  I  D+P ++ ++R+  R                              ++R+  
Sbjct: 100 GITVDHVIEFDVPDELIIERIIGRRVHAASGRVYHVTFNPPKVEGKDDVTGDDLTIRKDD 159

Query: 158 CLDYFERKDVMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
             D   ++ V  H++       +   A     R H +D       V++ +  I+
Sbjct: 160 QEDTVRKRLVEYHQQTAPLVNYYQQEAAANHTRYHKIDGTRPVNEVSSELARIL 213


>gi|37727511|gb|AAO13019.1| adenylate kinase [Trypanosoma cruzi]
          Length = 260

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 61/235 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T    +          V          + +  R  +      E G  A
Sbjct: 52  IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--------D 118
           E  +       H   ++       KI++      +      + D  +  +L        D
Sbjct: 99  ETFI-------HNGEMV-----PNKIVIS-----AVRKRLEQDDVKERGWLLDGFPRSQD 141

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYF 162
             + +    ++P   ++L++P  I ++R++NR +   +  +                +  
Sbjct: 142 QAEALESSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERL 201

Query: 163 ERKDVMIHEKRRQ---IFLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWE 210
            ++D    E       I+ +      +        ++   S  +V   +L +V  
Sbjct: 202 IQRDDDHRETVEARLRIYHEKLHGLKEHYGTLVETINGDQSIHAVTEGVLAVVER 256


>gi|312194571|ref|YP_004014632.1| adenylate kinase [Frankia sp. EuI1c]
 gi|311225907|gb|ADP78762.1| adenylate kinase [Frankia sp. EuI1c]
          Length = 217

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 63/235 (26%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDEFGA 64
              G++G+GK T   LL   L   + +V  + R      T      R  + S  + +   
Sbjct: 5   VIMGVQGSGKGTQARLLAADLDLVHINVGDIFRWNVQNHTKIGAQVRRAVDSGHLVDD-- 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                       + VE V+R  L            +  +   G   +++      L+   
Sbjct: 63  ------------ELVERVVRERLTNHDW-------NYGFVVDGFPRNARQAEF-FLESYD 102

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-----------------------Y 161
           +        I LDL  D  ++RV  R        LD                        
Sbjct: 103 IDG-----VIYLDLTDDEVVRRVLARRLCSRCG-LDYNLIASRPKVPDVCDVCGGALVAR 156

Query: 162 FERKDVMIHEKRRQIF-------LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +     +  + R+ +       L+I +   +   +VD++    +V   I   + 
Sbjct: 157 PDDNPEALAVRLRE-YHGKTRPVLEIFQR-KEYVAVVDASQPVPAVNAEIRERLR 209


>gi|168049134|ref|XP_001777019.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671584|gb|EDQ58133.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 222

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 74/228 (32%), Gaps = 48/228 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   +GK T   L+ +                     +  R  + +   +   A+ 
Sbjct: 4   IMISGAPASGKGTQCELIVQQ-----------YNLTHISTGDLLRAEVAAGTENGKLAQE 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                   R + V N +  A++E K+        + +   G   S      ++L+ ++  
Sbjct: 53  -----YMQRGELVPNDVVVAMVEKKLA----SATNGWLLDGYPRSLSQA--EALENMN-- 99

Query: 127 EVMPDCTIILD--LPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIH 170
            + P   I+L+  +P +I + RV  R     +  +                  ++     
Sbjct: 100 -IRPHLFILLEASVPDEILVGRVVGRRLDPVTGKIYHLMYSPPETPEIAARLIQRGDDTE 158

Query: 171 EKRR---QIFLDIARNQPDRCH----IVDSAHSFQSVATNILNIVWEL 211
           EK +   + +    ++  D       +VD       V  +I N++ EL
Sbjct: 159 EKVKLRLETYYSNVQSVLDVYKPVTKVVDGNRPKTEVFADIQNLITEL 206


>gi|170580372|ref|XP_001895235.1| signal recognition particle receptor alpha subunit  [Brugia malayi]
 gi|158597920|gb|EDP35937.1| signal recognition particle receptor alpha subunit , putative
           [Brugia malayi]
          Length = 669

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-D 60
                I F G+ G GK+T+++ +  +L    + V +      T  A A   +       +
Sbjct: 454 KRPYIIVFCGVNGVGKSTNLAKITFWLNENGHKVLIAA--ADTFRAGAVEQLRTHTKHLN 511

Query: 61  EFGAEAEAIV---FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLF 116
                +  +    +           I  A+  G  ++L D            R       
Sbjct: 512 ALHPNSVQLYEQGYGKDPAGLAAAAISIAVERGTDVVLVD---------TAGRMQDNEPL 562

Query: 117 LDSLQEISVQEVMPDCTII 135
           + SL ++ +Q   PD  + 
Sbjct: 563 MRSLAKL-IQVNQPDLVLF 580


>gi|89100393|ref|ZP_01173257.1| hypothetical protein B14911_07518 [Bacillus sp. NRRL B-14911]
 gi|89084912|gb|EAR64049.1| hypothetical protein B14911_07518 [Bacillus sp. NRRL B-14911]
          Length = 198

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 79/223 (35%), Gaps = 59/223 (26%)

Query: 15  AGKTTHISLLKRF--------LQRK--------NYDVHVTREPGG--TPAAEAARH---- 52
           +GK+T  S+L           L+ +         Y+  V+R   G   P  E  R     
Sbjct: 7   SGKSTVSSMLMEKGVTVIDADLEARLAVEKGEEAYNGIVSRFGTGILQPDGEIDRAKLGA 66

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDS 111
           ++     +     A  IV  A R   +E     A+ +G+ +++ D               
Sbjct: 67  IIFHNEEERLALNA--IVHPAVRKRMLEKK-EQAIQKGEQLVVLD--------------- 108

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              LF   L+ ++      D T+++    +  L+R+ NR SL E         + + + E
Sbjct: 109 IPLLFESKLEHLA------DKTLLVYTDGETQLRRLMNRNSLSEKEAEARINSQ-MPLTE 161

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           K R     +A        ++++  + +     +  ++   + +
Sbjct: 162 KVR-----LADA------VINNNGTIEETKEQLSGLLDLWLPE 193


>gi|300726890|ref|ZP_07060318.1| hypothetical protein PBR_1411 [Prevotella bryantii B14]
 gi|299775837|gb|EFI72419.1| hypothetical protein PBR_1411 [Prevotella bryantii B14]
          Length = 366

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 2/100 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   AGKTT +  +        + V    E           ++  +      G +A
Sbjct: 7   IVLTGGPCAGKTTALVKVIEHFSNLGWKVFTIPEVPTIFTQSGMDYLTTNKEFFYEGEKA 66

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
              +  +  L+     +  A  +  I++CDR      AY 
Sbjct: 67  TMEMQLS--LEDKFMKMAEAYGDKSIIICDRGALDISAYM 104


>gi|161508201|ref|YP_001578172.1| deoxyguanosine kinase [Lactobacillus helveticus DPC 4571]
 gi|160349190|gb|ABX27864.1| Deoxyguanosine kinase [Lactobacillus helveticus DPC 4571]
          Length = 228

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++  S+L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTSILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113
           +  A +     L+   + I+ AL E   +L DR +   +  +Q   D  +          
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106

Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
              H  ++ L+ +  +   PD  + +++  D  +KR++ R    E    D
Sbjct: 107 ELLHNMMNELERMPKKN--PDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 154


>gi|171185970|ref|YP_001794889.1| GTP-binding signal recognition particle [Thermoproteus neutrophilus
           V24Sta]
 gi|226734219|sp|B1Y9L4|SRP54_THENV RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|170935182|gb|ACB40443.1| GTP-binding signal recognition particle SRP54 G- domain
           [Thermoproteus neutrophilus V24Sta]
          Length = 433

 Score = 40.4 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53
           G+EG+GKTT  + L + L ++ Y V +       PAA +  R +
Sbjct: 106 GVEGSGKTTTAAKLAKLLVKRGYKVGLVETDTVRPAAFDQLRQL 149


>gi|328352201|emb|CCA38600.1| Signal recognition particle receptor subunit alpha [Pichia pastoris
           CBS 7435]
          Length = 558

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 21/137 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEF 62
           IS  G+ G GK+T++S L  +L    Y V +T     T  + A   + +         E 
Sbjct: 351 ISVVGVNGVGKSTNLSKLAFWLLSNKYRVLITA--CDTFRSGAVEQLRVHVNNLKKLTED 408

Query: 63  GAEAEAIVFAAARLDHVENVIRPAL---MEGK--ILLCDRFLDSSYAYQGERDSSQHLFL 117
            +  E         D V  + + A+    E K  I+L D            R  +    +
Sbjct: 409 ESHVELFQGGYGGADLVSKIAKGAIQYAEENKFDIVLLD---------TAGRRHNDAQLM 459

Query: 118 DSLQEISVQEVMPDCTI 134
             LQ        PD  I
Sbjct: 460 APLQGFVKAA-KPDKII 475


>gi|313158563|gb|EFR57957.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 361

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 109 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 162

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 163 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 201

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 202 DDAERMIATEDVKPD-VVFFDMP 223


>gi|302349262|ref|YP_003816900.1| Archaeal flagellar like-protein H [Acidilobus saccharovorans
          345-15]
 gi|302329674|gb|ADL19869.1| Archaeal flagellar like-protein H [Acidilobus saccharovorans
          345-15]
          Length = 229

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
           I+ EG  G+GKT+   LL +   R    V      GG+ 
Sbjct: 23 LIAVEGDNGSGKTSIALLLAQTYLRAGLSVVYFTNEGGSY 62


>gi|294851467|ref|ZP_06792140.1| fructose transport system kinase [Brucella sp. NVSL 07-0026]
 gi|294820056|gb|EFG37055.1| fructose transport system kinase [Brucella sp. NVSL 07-0026]
          Length = 242

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 51  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 110

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 111 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 163

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 164 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 200


>gi|281602377|gb|ADA75361.1| putative ATP-binding protein yghT [Shigella flexneri 2002017]
          Length = 131

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 31/141 (21%)

Query: 88  MEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQEV------MPDCTIIL 136
             G I+L DR+       AY G     +     F+  L     +         PD  I L
Sbjct: 6   RRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKL 65

Query: 137 DLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
           ++ +++   R     R SL     +       +            +          +D+ 
Sbjct: 66  NVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGAQLVD--------IDAN 107

Query: 195 HSFQSVATNILNIVWELVQKR 215
              + V  +    + + +  R
Sbjct: 108 QPLEQVLVDAEKAITDFMTAR 128


>gi|254568342|ref|XP_002491281.1| Signal recognition particle (SRP) receptor-alpha subunit [Pichia
           pastoris GS115]
 gi|238031078|emb|CAY69001.1| Signal recognition particle (SRP) receptor-alpha subunit [Pichia
           pastoris GS115]
          Length = 558

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 21/137 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEF 62
           IS  G+ G GK+T++S L  +L    Y V +T     T  + A   + +         E 
Sbjct: 351 ISVVGVNGVGKSTNLSKLAFWLLSNKYRVLITA--CDTFRSGAVEQLRVHVNNLKKLTED 408

Query: 63  GAEAEAIVFAAARLDHVENVIRPAL---MEGK--ILLCDRFLDSSYAYQGERDSSQHLFL 117
            +  E         D V  + + A+    E K  I+L D            R  +    +
Sbjct: 409 ESHVELFQGGYGGADLVSKIAKGAIQYAEENKFDIVLLD---------TAGRRHNDAQLM 459

Query: 118 DSLQEISVQEVMPDCTI 134
             LQ        PD  I
Sbjct: 460 APLQGFVKAA-KPDKII 475


>gi|227887691|ref|ZP_04005496.1| lipoprotein [Escherichia coli 83972]
 gi|227835087|gb|EEJ45553.1| lipoprotein [Escherichia coli 83972]
 gi|307555079|gb|ADN47854.1| conserved hypothetical protein [Escherichia coli ABU 83972]
          Length = 257

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 37/177 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +G GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV-------------------FAAARLDHVENVIRPALMEGKILLCDRF--- 98
              ++ +++                    F+  R+ ++  V R A   G +++ DRF   
Sbjct: 83  AKSSKTQSMKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQA 141

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146
             S + Y G     +         ++ +E           P+  I L + +D  + R
Sbjct: 142 EISGFYYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 198


>gi|126460331|ref|YP_001056609.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
           calidifontis JCM 11548]
 gi|171855105|sp|A3MWX6|SRP54_PYRCJ RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|126250052|gb|ABO09143.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
           calidifontis JCM 11548]
          Length = 431

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
           G+EG+GKTT  + L ++L ++ Y V +  
Sbjct: 105 GVEGSGKTTTAAKLAKYLAKRGYKVGLVE 133


>gi|269962723|ref|ZP_06177066.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832525|gb|EEZ86641.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 129

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 19/94 (20%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M++   +   G+ G+GKTT    L + L+ K+++  +  E       E            
Sbjct: 1  MSNAKLLLIRGLPGSGKTTLAKKLSKQLKAKHFEADMYFE---NEIGEY------HFDGT 51

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
          +     E                R  L +GK ++
Sbjct: 52 KLADAHEWCF----------QQTRKWLSKGKTVI 75


>gi|15964232|ref|NP_384585.1| putative fructose transport system kinase [Sinorhizobium meliloti
          1021]
 gi|307301378|ref|ZP_07581140.1| putative fructose transport system kinase [Sinorhizobium meliloti
          BL225C]
 gi|11066210|gb|AAG28501.1|AF196574_4 FrcK [Sinorhizobium meliloti]
 gi|15073408|emb|CAC41916.1| Putative fructose transport system kinase [Sinorhizobium meliloti
          1021]
 gi|306903834|gb|EFN34421.1| putative fructose transport system kinase [Sinorhizobium meliloti
          BL225C]
          Length = 206

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 2  NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSC 57
          NSG FI    G  GAGK+T    L   + +      V    G        E    +    
Sbjct: 16 NSGRFIVAIAGPPGAGKSTLSETLAEAITQAGEKAAVLPMDGFHMDNAVLEEKGLLARKG 75

Query: 58 GVDEFGAEAEAIVFAAARLD 77
            + F   +     AA R D
Sbjct: 76 APETFDVRSFLATLAAVRAD 95


>gi|302039024|ref|YP_003799346.1| lipid A export ATP-binding/permease protein MsbA [Candidatus
           Nitrospira defluvii]
 gi|300607088|emb|CBK43421.1| Lipid A export ATP-binding/permease protein MsbA [Candidatus
           Nitrospira defluvii]
          Length = 576

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 22/100 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR-------FLQRKNYDVHVTR----------EPGGT 44
             G  I+  G  G+GKTT ++LL R        L    +DV   R           P  T
Sbjct: 359 KPGELIAIVGPTGSGKTTIMNLLHRFYDPTAGRLTVDGHDVKDVRLDSLYRQIALVPQDT 418

Query: 45  PA-AEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVI 83
                  R  +     D     +E  + AA++  H    I
Sbjct: 419 ILFGGPIRDNIRYGREDA----SEEEMIAASKAAHAHEFI 454


>gi|18543259|ref|NP_569965.1| CG3587 [Drosophila melanogaster]
 gi|2832763|emb|CAA15685.1| EG:39E1.2 [Drosophila melanogaster]
 gi|7290238|gb|AAF45700.1| CG3587 [Drosophila melanogaster]
 gi|16768888|gb|AAL28663.1| LD09945p [Drosophila melanogaster]
 gi|220942828|gb|ACL83957.1| CG3587-PA [synthetic construct]
 gi|220953024|gb|ACL89055.1| CG3587-PA [synthetic construct]
          Length = 299

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           +   G+  +GK+T    L+     +   VH+  E    P A   ++
Sbjct: 3  LVVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN 49


>gi|120537175|ref|YP_957232.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming)
           PhnN [Marinobacter aquaeolei VT8]
 gi|120553166|ref|YP_957517.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming)
           PhnN [Marinobacter aquaeolei VT8]
 gi|120323015|gb|ABM17330.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming)
           PhnN [Marinobacter aquaeolei VT8]
 gi|120327010|gb|ABM21317.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming)
           PhnN [Marinobacter aquaeolei VT8]
          Length = 189

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 78/216 (36%), Gaps = 44/216 (20%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I   G  G+GK T I L ++ L + +      R      +A    HV L+   +EF
Sbjct: 2   AGTLIYLIGPSGSGKDTLIDLARQQLGQDSGVCFAHRYITRPASAGGENHVALT--EEEF 59

Query: 63  GAEAEAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            A   A +FA +   H     +   I   L +G  ++            G R   +    
Sbjct: 60  LARQRAGLFAMSWASHGCHYGIGIEINQWLAKGLTVVM----------NGSRGYLKTAL- 108

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS---LRESACLDYFERKDVMIHEKRR 174
                 +  E+ P   +++++  ++  +R+  R           L+   + D+       
Sbjct: 109 -----QNYPELCP---VLIEVSPEVLKERLARRGRETLQDIELRLNRNSQFDLD------ 154

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
                    +   C  VD+ HS ++ +  +L I+ +
Sbjct: 155 --------AEKG-CLRVDNTHSPEAASQRLLAIINQ 181


>gi|328865257|gb|EGG13643.1| signal recognition particle receptor alpha subunit [Dictyostelium
           fasciculatum]
          Length = 607

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 19/31 (61%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I F G+ G GK+T+++ +  +L+   + V +
Sbjct: 402 IVFSGVNGVGKSTNLAKVCYWLKANGHRVML 432


>gi|237753089|ref|ZP_04583569.1| adenylylsulfate kinase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375356|gb|EEO25447.1| adenylylsulfate kinase [Helicobacter winghamensis ATCC BAA-430]
          Length = 329

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 15/94 (15%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M+SG+ I   G+ G+GKTT  S L   L+++   V +          +  R++      +
Sbjct: 1  MSSGVVIWICGLSGSGKTTLASALVDKLKQQFSSVVLL-------DGDYLRNI-----YN 48

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
          +F    E  +    R   +  ++   +  G I++
Sbjct: 49 DFNYSKENRLNLVYRSQKLCAML---VESGCIVV 79


>gi|225870910|ref|YP_002746857.1| dephospho-CoA kinase [Streptococcus equi subsp. equi 4047]
 gi|225700314|emb|CAW94600.1| dephospho-CoA kinase [Streptococcus equi subsp. equi 4047]
          Length = 201

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 39/215 (18%)

Query: 11  GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60
           GI G   +GK+T ++L+++    +   +  VH  ++ GG             +LL  G  
Sbjct: 10  GITGGIASGKSTAVALIRQAGYQVIDADQVVHELQKKGGKLYQVLLETFGQDILLPSGQL 69

Query: 61  EFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +    AE +       A        +IR AL + K  L           Q E      L 
Sbjct: 70  DRPKLAELLFAHSENMAKSSQQQNAIIREALAKQKEELS----------QTEAIFFMDLP 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L  L E+  Q+   D   +L +  +  LKR+  R  L E A       +  M  ++    
Sbjct: 120 L--LVELGYQDWF-DAIWLLYVDEETQLKRLMKRNQLTELAARQRIASQLPMSQKR---A 173

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + D+         ++D+   FQ++ T I   + +L
Sbjct: 174 YADL---------VIDNTGDFQALETQISKALHDL 199


>gi|157371785|ref|YP_001479774.1| kinase [Serratia proteamaculans 568]
 gi|157323549|gb|ABV42646.1| kinase [Serratia proteamaculans 568]
          Length = 169

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
          + I F G+ G+GKTT    L   L  
Sbjct: 1  MLIVFSGLPGSGKTTLARALASALPA 26


>gi|2772967|gb|AAC08878.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772969|gb|AAC08879.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772971|gb|AAC08880.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772973|gb|AAC08881.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772975|gb|AAC08882.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772977|gb|AAC08883.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772979|gb|AAC08884.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772981|gb|AAC08885.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772983|gb|AAC08886.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772985|gb|AAC08887.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772987|gb|AAC08888.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772989|gb|AAC08889.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772991|gb|AAC08890.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772993|gb|AAC08891.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772995|gb|AAC08892.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772997|gb|AAC08893.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2772999|gb|AAC08894.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773001|gb|AAC08895.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773003|gb|AAC08896.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773005|gb|AAC08897.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773007|gb|AAC08898.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773009|gb|AAC08899.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773011|gb|AAC08900.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773013|gb|AAC08901.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773015|gb|AAC08902.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773017|gb|AAC08903.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773019|gb|AAC08904.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773021|gb|AAC08905.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773025|gb|AAC08907.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773027|gb|AAC08908.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773029|gb|AAC08909.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773031|gb|AAC08910.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773033|gb|AAC08911.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773035|gb|AAC08912.1| regulatory protein PilA [Neisseria meningitidis]
 gi|2773037|gb|AAC08913.1| regulatory protein PilA [Neisseria meningitidis]
          Length = 144

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 22  GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 76

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 77  TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 127

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 128 AMPDAPHEIIVVLD 141


>gi|332045149|gb|EGI81342.1| guanylate kinase [Lacinutrix algicola 5H-3-7-4]
          Length = 195

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 36/150 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I F    G+GKTT +  L   L++K  ++           +  +R         
Sbjct: 1   MKQGKLIVFSAPSGSGKTTIVRHL---LKQKELNLAF-------SISATSRE----KRGT 46

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  AE    + A     H++        E               Y+     +    ++ L
Sbjct: 47  EVHAEDYYFMSAKEFKQHIKEDNFLEWEE--------------VYRDNFYGTLKTEVERL 92

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
             +          +I D+ V  GL R++ +
Sbjct: 93  WALGKN-------VIFDIDVSGGL-RIKRK 114


>gi|313149964|ref|ZP_07812157.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138731|gb|EFR56091.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 308

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 56  MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 109

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 110 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 148

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 149 DDAERMIATEDVKPD-VVFFDMP 170


>gi|310641514|ref|YP_003946272.1| signal recognition (srp) component [Paenibacillus polymyxa SC2]
 gi|309246464|gb|ADO56031.1| Signal recognition (SRP) component [Paenibacillus polymyxa SC2]
          Length = 458

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L + LQ++N+   +       PAA     +L   ++  V   G +  
Sbjct: 108 GLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQILGEQINAPVFTLGDQTS 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            +  A   L H ++           ++ D            R       ++ L++I    
Sbjct: 168 PVEIAKQGLQHAKD------NGNDYVIID---------TAGRLHVDEELMEELRQIHTN- 211

Query: 128 VMPDCTII 135
           V PD  ++
Sbjct: 212 VKPDEVLL 219


>gi|295706990|ref|YP_003600065.1| adenylylsulfate kinase [Bacillus megaterium DSM 319]
 gi|294804649|gb|ADF41715.1| adenylylsulfate kinase [Bacillus megaterium DSM 319]
          Length = 199

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L  KN                  R+ +L      FG     
Sbjct: 32  FTGLSGSGKSTVANAVAKALFDKN-----------------IRNYVLDGDNVRFGLNKNL 74

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              A  R +++     V +  +  G+++L 
Sbjct: 75  GFSAEDRTENIRRIGEVSKLFVDSGQVVLT 104


>gi|255942655|ref|XP_002562096.1| Pc18g02530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586829|emb|CAP94477.1| Pc18g02530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1344

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 14/66 (21%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSC 57
            + SG FI+F G  G GK+T ISLL+RF            EP            R + LS 
Sbjct: 1084 IQSGQFIAFVGPSGCGKSTIISLLERF-----------YEPTHGAILFGGRDIRSIELSS 1132

Query: 58   GVDEFG 63
                  
Sbjct: 1133 YRRALS 1138


>gi|114571000|ref|YP_757680.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Maricaulis maris MCS10]
 gi|114341462|gb|ABI66742.1| adenylylsulfate kinase [Maricaulis maris MCS10]
          Length = 631

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 28/138 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L++R L +  +          +   +  R         + G   E 
Sbjct: 463 FTGLSGAGKSTVANLVERKLSQAGHH-------TYSLDGDNIR----HGLNRDLGFTDE- 510

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 R+++V  +       GK+     F+DS         S        ++E+     
Sbjct: 511 -----DRVENVRRI----GEVGKL-----FVDSGLIVTCSFISPFRSERQMVRELVDDGE 556

Query: 129 MPDCTIILDLPVDIGLKR 146
                + +D P+++ ++R
Sbjct: 557 F--IEVFIDAPLEVCIER 572


>gi|103487011|ref|YP_616572.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Sphingopyxis alaskensis RB2256]
 gi|98977088|gb|ABF53239.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Sphingopyxis alaskensis RB2256]
          Length = 633

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L+++ L R N                     LL       G   + 
Sbjct: 470 FTGLSGSGKSTIANLVEKKLHRMNRH-----------------SFLLDGDNVRHGLNKDL 512

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +     G I++         A+     + + +    L     
Sbjct: 513 GFTEADRIENIRRVGEVAKLMTDAGLIVIT--------AFISPFRAEREMVRSML--PEG 562

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           + +     I +D P++   +R
Sbjct: 563 EFIE----IFIDTPLEEAERR 579


>gi|307318050|ref|ZP_07597487.1| putative fructose transport system kinase [Sinorhizobium meliloti
          AK83]
 gi|306896452|gb|EFN27201.1| putative fructose transport system kinase [Sinorhizobium meliloti
          AK83]
          Length = 206

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 4/80 (5%)

Query: 2  NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSC 57
          NSG FI    G  GAGK+T    L   + +      V    G        E    +    
Sbjct: 16 NSGRFIVAIAGPPGAGKSTLSETLAEAITQAGEKAAVLPMDGFHMDNAVLEEKGLLARKG 75

Query: 58 GVDEFGAEAEAIVFAAARLD 77
            + F   +     AA R D
Sbjct: 76 APETFDVRSFLATLAAVRAD 95


>gi|323342157|ref|ZP_08082390.1| guanylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464582|gb|EFY09775.1| guanylate kinase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 193

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 27/176 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  GL I F G  G GK T   L   +  L         TR+P          + +    
Sbjct: 4   MRRGLLIIFSGPSGVGKGTVRKLFFDREELNLAFSISMTTRKPRNGEVDGQDYYFVTQER 63

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E     E +  A    +H   +    L E      DR           RD  +++ L+
Sbjct: 64  FNEALQNNELLEHAEFVGNHYGTL----LAE-----VDR----------LRDLGKNVLLE 104

Query: 119 SLQEISVQEV--MPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
              + ++Q +  +PD  +I L +P   +   +R++ R +  +    +  E+    +
Sbjct: 105 IEVQGALQVIDRVPDSLSIFL-VPPSMEELKRRIEGRQTESQDVINERLEKAAKEM 159


>gi|315500465|ref|YP_004089268.1| aminoglycoside phosphotransferase [Asticcacaulis excentricus CB 48]
 gi|315418477|gb|ADU15117.1| aminoglycoside phosphotransferase [Asticcacaulis excentricus CB 48]
          Length = 482

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 21/161 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M     ++  G+ G+GK+TH   +     +     V          + E  + +      
Sbjct: 321 MKPAELLAVGGLSGSGKSTHSRHIAPETGRAPGALVL--------RSDEMRKRLWACPEF 372

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +    EA      A    H+ ++ R AL  G+ ++ D    +++  Q    + +   L  
Sbjct: 373 ETLPKEAYTPEENARVYTHLFDLARTALQSGQAVILD----ATFRNQ--DRAREAKALAQ 426

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            Q ++ +       + +D+  D  L+RV  R +    A  D
Sbjct: 427 GQGVAFRA------LWMDVTADERLRRVLQRRNDVSDATPD 461


>gi|225026568|ref|ZP_03715760.1| hypothetical protein EUBHAL_00818 [Eubacterium hallii DSM 3353]
 gi|224956117|gb|EEG37326.1| hypothetical protein EUBHAL_00818 [Eubacterium hallii DSM 3353]
          Length = 609

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L++ L                        +LL       G       
Sbjct: 445 GLSGSGKSTLANELEKHLAALGKHT-----------------MLLDGDNVRMGLNKNLGF 487

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
             A R++++     V +     G I++ 
Sbjct: 488 KEADRIENIRRIAEVAKLMNDAGLIVIT 515


>gi|88604250|ref|YP_504428.1| signal recognition particle-docking protein FtsY [Methanospirillum
           hungatei JF-1]
 gi|88189712|gb|ABD42709.1| signal recognition particle-docking protein FtsY [Methanospirillum
           hungatei JF-1]
          Length = 353

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 27/138 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------V 59
           I F G+ G GKTT I+ + RFLQ+  + V +    G T  A A   + +           
Sbjct: 159 ILFTGVNGTGKTTSIAKVTRFLQKNGFSVVL--GAGDTFRAGAIEQIDVHGERLGVKVIQ 216

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            + G++  A++F          +         ++L D            R  ++   ++ 
Sbjct: 217 HQEGSDPTAVLFDTVEYARAHKI--------DVVLGD---------TAGRFHNRANLMNQ 259

Query: 120 LQEISVQEVMPDCTIILD 137
           L +I  + + PD  + +D
Sbjct: 260 LAKI-RRVINPDLIVYVD 276


>gi|21228096|ref|NP_634018.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
 gi|20906535|gb|AAM31690.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
          Length = 255

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 40/211 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGK+T + +L   L+          YD+    +   +  +   + + +     +  
Sbjct: 33  GPNGAGKSTTVMMLTTLLRPSSGTAKVCGYDIVKDSKKVRSKISYVPQDMAVD---RKLT 89

Query: 64  AEAEAIVFAA-----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                +++A       R   V+ VI          L DR  D    Y G       L   
Sbjct: 90  GRENVMLYAKLYGIQNRNSKVDEVIEMMG------LSDRAGDLVAKYSGGMRRRLELSQA 143

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + E           + LD    +GL  V  R  + E   +   + + + I       +L
Sbjct: 144 LVHEPE--------VLFLD-EPTLGLD-VSGRKKIWEHIRM--LKAEGMTIFMTTH--YL 189

Query: 179 DIARNQPDRCHIVD-----SAHSFQSVATNI 204
           + A    +R  I+D     +  S + +  +I
Sbjct: 190 EEAEKYCNRVAIIDKGRIAAVGSPEKLVNSI 220


>gi|310816898|ref|YP_003964862.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Ketogulonicigenium vulgare Y25]
 gi|308755633|gb|ADO43562.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Ketogulonicigenium vulgare Y25]
          Length = 636

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 40/148 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             + F G+ G+GK+T  +++++ L                         LL       G 
Sbjct: 469 KLVWFTGLSGSGKSTIANMVEKKLFALGKH-----------------SFLLDGDNVRHGL 511

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +     A R++++     V +  +  G I+L         A+     + + +  D L 
Sbjct: 512 NRDLGFSDADRVENIRRVGEVGKLMVESGLIVLT--------AFISPFRNERQMVRDML- 562

Query: 122 EISVQEVMPDCTI---ILDLPVDIGLKR 146
                   P  T     +D P+ +   R
Sbjct: 563 --------PAGTFIEVFIDTPLAVAESR 582


>gi|291454278|ref|ZP_06593668.1| ATP/GTP-binding protein [Streptomyces albus J1074]
 gi|291357227|gb|EFE84129.1| ATP/GTP-binding protein [Streptomyces albus J1074]
          Length = 223

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 53/159 (33%), Gaps = 43/159 (27%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  +   G+ G+GK+T I    R  +  + D   TRE                      
Sbjct: 54  QGDLVVVSGLPGSGKSTLIRRTVRAARADSQD---TRE---------------QWEARLP 95

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCD----RFLDSSYAYQGERDSSQHLFL 117
            A   A+    ARL H    +R  L  G+ +++ D    R++    A +  R        
Sbjct: 96  AALPYALYRPLARLAHYA-ALRRLLRAGRSVVVHDCGTQRWVRHWLAREARRRG------ 148

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR 154
            +L             + LD+  D  L  +R + R   R
Sbjct: 149 RTLHM-----------VFLDVDPDTALDGQRARGRGVSR 176


>gi|229030235|ref|ZP_04186292.1| uridine kinase [Bacillus cereus AH1271]
 gi|228731079|gb|EEL82004.1| uridine kinase [Bacillus cereus AH1271]
          Length = 186

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 59/222 (26%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           MN     I+   + G GKTT    L + L   +   +D +  +    T   +        
Sbjct: 1   MNKKTKIITIAAVSGGGKTTVTENLTQKLTNSKALYFDSYHFKN-CPTDICKWIDE---G 56

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQH 114
              DE+                + + I+  + E K+  ++ D +    +AY         
Sbjct: 57  ANYDEWVLTP------------LIHDIQHLIREDKVDYIILD-Y---PFAY------LNS 94

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR- 173
              + +          D TI +D P+DI + R   R         D+ E     IH    
Sbjct: 95  EMREFI----------DATIFIDTPLDIAMARRILR---------DFKEDTIDEIHNDLK 135

Query: 174 ------RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208
                 R+ +L+     +P+   ++D + S   +  + +  +
Sbjct: 136 HYMTFARKAYLEAIHTVKPNSDIVLDGSLSVSEIMNHAVEEL 177


>gi|227509919|ref|ZP_03939968.1| deoxyguanosine kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227512853|ref|ZP_03942902.1| deoxyguanosine kinase [Lactobacillus buchneri ATCC 11577]
 gi|227522980|ref|ZP_03953029.1| deoxyguanosine kinase [Lactobacillus hilgardii ATCC 8290]
 gi|227083853|gb|EEI19165.1| deoxyguanosine kinase [Lactobacillus buchneri ATCC 11577]
 gi|227089798|gb|EEI25110.1| deoxyguanosine kinase [Lactobacillus hilgardii ATCC 8290]
 gi|227190639|gb|EEI70706.1| deoxyguanosine kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 212

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 44/227 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKT+   +L + L             G     E+  H  +     +   +  A +   
Sbjct: 9   GAGKTSLTHMLSKHL-------------GTPAYYESVDHNQILPLFYK-DPKKYAFLLQI 54

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQEISVQEVM-- 129
             L+     I+ A    + +L DR  F DS   +             ++ +  +Q +M  
Sbjct: 55  DFLNRRMADIKKAWKNEESVL-DRSIFEDSLLFHLNADLGRATETEVNIYDSLLQNMMQE 113

Query: 130 ---------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM-----IHEKRRQ 175
                    PD  I +++  +  L R++ R           FE+ D        ++   Q
Sbjct: 114 LPHTSHSKNPDLLIHINISFETMLARIKKRGRP--------FEQIDNDPSLYQYYKDLNQ 165

Query: 176 IFLDIARNQPDRCHI-VDSAHSFQSVATNI-LNIVWELVQKRVSPLS 220
            +     N      I ++    F  V  +   + V++L+ ++++ L+
Sbjct: 166 RYQQWYENYDKSAKIQINGDR-FDFVEKDTDRHAVFDLIDQKINQLA 211


>gi|56963637|ref|YP_175368.1| cytidylate kinase [Bacillus clausii KSM-K16]
 gi|56909880|dbj|BAD64407.1| cytidylate kinase [Bacillus clausii KSM-K16]
          Length = 250

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 33/232 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59
           M  G  ++ +G  GAGK+T        L     D     R       AE     L     
Sbjct: 26  MAKGFNVAIDGPAGAGKSTVAKKTAEKLGFLYIDTGAMYRAITFAALAEGID--LHDGKA 83

Query: 60  -DEFGAEAEAIVFAAARLDHVEN---VIRPALMEGKI------LLCDRFLDSSY-AYQGE 108
             +   ++E  + ++     V      I  A+   ++      +   R +     A Q E
Sbjct: 84  LGKLLEKSELRLESSNEGTAVFWNGADITAAIRTNEVNSNVSLVASHREVREGMTAMQQE 143

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNRY-SLRESACLDYFERK 165
              S++  LD  ++I    V+PD    + L   V+   +R + R+    E      FE+ 
Sbjct: 144 LAKSKNAVLDG-RDIGTH-VLPDANVKVFLTASVE---ERARRRHLEQLEKGLPSDFEQL 198

Query: 166 DVMIHEK-----RRQIF-LDIARNQPDRCHIVD-SAHSFQSVATNILNIVWE 210
              I ++      R I  L  A +      +VD ++     V   IL++V E
Sbjct: 199 KKDIAKRDELDSTRAIAPLKQAADA----QVVDTTSMGIDEVVETILDLVKE 246


>gi|150016810|ref|YP_001309064.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052]
 gi|149903275|gb|ABR34108.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052]
          Length = 277

 Score = 40.4 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 8/59 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +  G FIS  G  G GKTT + ++   LQ  +  V V          ++ R + L    
Sbjct: 54  IKEGEFISLLGPSGCGKTTLLRIIADLLQPSSGKVIV--------RGQSPREIRLQKKY 104


>gi|313681370|ref|YP_004059108.1| guanylate kinase [Sulfuricurvum kujiense DSM 16994]
 gi|313154230|gb|ADR32908.1| guanylate kinase [Sulfuricurvum kujiense DSM 16994]
          Length = 206

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 29/180 (16%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           MN   G  +   G  GAGK++ I  +K  +    + +  T  P      +   +  +   
Sbjct: 1   MNRQSGAILVLSGPSGAGKSSLIQKIKDQIGPIYFSISTTTRPIREGEVDGVHYYFVGVE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             +   E E  +  A    +        ++ AL EGK+++ D         QG       
Sbjct: 61  EFKRDIEDEMFLEYAVVHGNYYGTSLGPVKKALKEGKLVIFD------IDVQGHD----- 109

Query: 115 LFLDSLQEISVQEVMPDCT--IILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                    +VQ  + D T  + +  P ++   +R+ NR +  E   L   E     +  
Sbjct: 110 ---------AVQNRLSDITTSVFITTPSLEELKRRLYNRSTDSEEVILGRIEMAKREVQR 160


>gi|308159250|gb|EFO61792.1| Hypothetical protein GLP15_2179 [Giardia lamblia P15]
          Length = 352

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
            I  +G  GAGKTT I  L+  L +    V V  E
Sbjct: 98  LIVIDGPIGAGKTTFIEHLRDELVQSGARVRVIDE 132


>gi|312071485|ref|XP_003138630.1| srpr protein [Loa loa]
 gi|307766205|gb|EFO25439.1| srpr protein [Loa loa]
          Length = 662

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVD 60
                I F G+ G GK+T+++ +  +L    + V +      T  A A   +      ++
Sbjct: 447 KRPYIIVFCGVNGVGKSTNLAKITFWLNENGHKVLIAA--ADTFRAGAVEQLRTHTMHLN 504

Query: 61  EFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                +  +    +           I  A+  G  ++    +D+       R       +
Sbjct: 505 ALHPNSVQLYEQGYGKDPAGLTAAAISIAMERGTDVVM---VDT-----AGRMQDNEPLM 556

Query: 118 DSLQEISVQEVMPDCTII 135
            SL ++ +Q   PD  + 
Sbjct: 557 RSLAKL-IQLNKPDLVLF 573


>gi|296221401|ref|XP_002756726.1| PREDICTED: L-seryl-tRNA(Sec) kinase-like [Callithrix jacchus]
          Length = 342

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 30/160 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAA--------------EAARHVLL 55
           G+ GAGK+T    L   L+  + + V V       P A              +  R  LL
Sbjct: 25  GLPGAGKSTFARALAHRLRQEQGWAVGVVAYDDVMPDAFLAGASALPAPSQWKLLRQELL 84

Query: 56  SCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                   A       +A   R + +       L +  ++          A+  E  S  
Sbjct: 85  KYLEYFLMAVINGCQMSAPPDRTEAMWEDFTTCLKDQDLIFS-------AAF--EARSCY 135

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
            L   ++   S+        + LD P++  L+R   R   
Sbjct: 136 LLTKTAVSRHSLGFCQ----LFLDCPLETCLQRNGQRPRA 171


>gi|284039605|ref|YP_003389535.1| signal recognition particle protein [Spirosoma linguale DSM 74]
 gi|283818898|gb|ADB40736.1| signal recognition particle protein [Spirosoma linguale DSM 74]
          Length = 439

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G+GKTT    L  +L+++  +V +       PAA     VL     ++ G E 
Sbjct: 102 ILIAGLQGSGKTTFSGKLASYLKKQGRNVLLVAADIYRPAAIDQLKVL----GEQVGVEV 157

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
            A       +   +N I  A   G KI++ D
Sbjct: 158 YAEPENKNAVQIAQNAIALARKTGKKIVIVD 188


>gi|210134821|ref|YP_002301260.1| adenylate kinase [Helicobacter pylori P12]
 gi|210132789|gb|ACJ07780.1| adenylate kinase [Helicobacter pylori P12]
          Length = 191

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D    + V  H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +              I++   S + +   +   +   
Sbjct: 151 DPLVAIQNFYKAKHLHKIINGERSIEEIVNEMQKYILSF 189


>gi|254818764|ref|ZP_05223765.1| adenylylsulfate kinase [Mycobacterium intracellulare ATCC 13950]
          Length = 231

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 17/148 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  +++++ L  +    ++           A   +L      E
Sbjct: 23  HQGCVIWFTGLSGSGKSTVANIVEQKLYERGIRSYLLDGDNVRYGLNAGPELLEERHGPE 82

Query: 62  FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           F         A  R +++  +    +     G I L         A+       +     
Sbjct: 83  FAKRFGLGFSAEDREENIRRIGAVAKLFCEAGVIALT--------AFISPYVRDRDAIRA 134

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +L +   QE      I +D P+++  +R
Sbjct: 135 TLGDGDFQE------IFIDTPIEVCEQR 156


>gi|288940858|ref|YP_003443098.1| adenylylsulfate kinase [Allochromatium vinosum DSM 180]
 gi|288896230|gb|ADC62066.1| adenylylsulfate kinase [Allochromatium vinosum DSM 180]
          Length = 228

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 77/222 (34%), Gaps = 34/222 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G+ G+GK+T  ++L   L  +     V           A+  +L     +E
Sbjct: 25  HRGCVIWLTGLSGSGKSTLANVLDHRLSERGIKTAVLDGDNVRHGLNASTGMLRETHGEE 84

Query: 62  FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           F         A  R +++  +    +     G I L         A+       +    +
Sbjct: 85  FAQRFGLGFTAIDREENIRRIGAVAQLFCEAGLIALT--------AFISPYRIDRRRVRN 136

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           S++E    +      + +D P+++  +R  +  Y    +  L +F   D           
Sbjct: 137 SMRE---GDF---IEVFVDTPLEVCEQRDPKGLYKKARAGELKHFTGIDDPYE------- 183

Query: 178 LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218
              A   P+   +V +   + + +A  ++     L+ +R+ P
Sbjct: 184 ---APEAPE--LVVQAGERTPEELADEVIAY---LIDRRILP 217


>gi|77919480|ref|YP_357295.1| cytidylate kinase [Pelobacter carbinolicus DSM 2380]
 gi|123573951|sp|Q3A3D2|KCY_PELCD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|77545563|gb|ABA89125.1| cytidylate kinase [Pelobacter carbinolicus DSM 2380]
          Length = 235

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          MN  L I+ +G  G GK+T    L + L+  N D
Sbjct: 1  MNRQLIIAIDGPSGVGKSTLSRRLAQQLRYVNID 34


>gi|328867697|gb|EGG16079.1| adenylate kinase [Dictyostelium fasciculatum]
          Length = 574

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 33/154 (21%)

Query: 79  VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ------EISVQEVMP-- 130
           +E + RP    G  ++ D F  ++   Q E  +  +  + SL+      ++S     P  
Sbjct: 257 LEELRRPEYRSG--VVVDGFPRTNT--QVECLTLLYEKMKSLRKNYFTTQLSSCFPRPVF 312

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACL-----------DYFERKDVMIHEKRRQIFLD 179
             T++  +     L R   R  + +   L           + +      I  KR +IF D
Sbjct: 313 RVTVLF-IEEKESLDRQIRRGQITKETNLRLRAQDLPLLEERYTDTSEEIARKRYKIFRD 371

Query: 180 -------IARNQPDRCHIVDSAHSFQSVATNILN 206
                  + ++ P    I+D++ S   V  +I+ 
Sbjct: 372 HYSTLTALKKHFP--FSIIDASKSINEVQQSIIK 403


>gi|288923197|ref|ZP_06417340.1| adenylate kinase [Frankia sp. EUN1f]
 gi|288345458|gb|EFC79844.1| adenylate kinase [Frankia sp. EUN1f]
          Length = 199

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 65/220 (29%), Gaps = 40/220 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64
              G  GAGK T  + +     R       T +      +      R         E   
Sbjct: 4   VLLGPPGAGKGTQAARISA---RHGVPAISTGQLFDQQISAGTSLGRRAERYVRAGELVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   +   A RL    +     L++G                  R   Q   LD + + S
Sbjct: 61  DEIVLDIVADRLTTGADCGAGFLLDGF----------------PRTLPQAEALDRMLDAS 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
              +  D  + L +     L R+ +R +L E    D           +R ++F   A   
Sbjct: 105 CGPL--DVVMDLKVDQAEVLARI-SRRALSEGRVDD-----TAETARRRMEVFT--AETA 154

Query: 185 PDR--------CHIVDSAHSFQSVATNILNIVWELVQKRV 216
           P R           +D + +   VA  I   +  ++  ++
Sbjct: 155 PLRSHYGEQGLLRTIDGSGTPDDVAARIEEALTAVLHPQL 194


>gi|187929932|ref|YP_001900419.1| putative deoxyguanosine kinase [Ralstonia pickettii 12J]
 gi|187726822|gb|ACD27987.1| putative deoxyguanosine kinase (dGuo kinase) (DGK) protein
           [Ralstonia pickettii 12J]
          Length = 214

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 22/177 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT     L   L+        T        +  AR             + 
Sbjct: 9   IVVEGPIGVGKTALAQRLADHLRAS------TLFETPAENSFIAR-FYEDPARYALPVQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSL-QEI 123
             ++  A RL         A + G+ ++ D FL  D  +A Q    + +    D++   +
Sbjct: 62  RFLLQRAERL----KAWHKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMANAL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ +   D  I L    +  L RV  R    E+         D    E+    + ++
Sbjct: 117 ALPQQRIDLVICLQARAEDLLPRVTRRAVPYETGI-------DAEYLERICAAYGEL 166


>gi|48425494|pdb|1RZ3|A Chain A, Structure Of A Possible Uridine Kinase From Bacillus
           Stearothermophilus
          Length = 201

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 15/159 (9%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           GI+G   +GKTT  + L + L+ +   V V          E A+      G +E+    E
Sbjct: 26  GIDGLSRSGKTTLANQLSQTLREQGISVCVFH--XDDHIVERAKRY--HTGNEEW---FE 78

Query: 68  AIVFAAARLDHVENVIRPALMEGKILL--CDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                         + R      ++ L   D   D+          S  + ++ +  +  
Sbjct: 79  YYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDXIXIEGVF-LQR 137

Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +E  P  D  + LD P +I   R  ++        ++ +
Sbjct: 138 KEWRPFFDFVVYLDCPREIRFARENDQVKQNIQKFINRY 176


>gi|326693445|ref|ZP_08230450.1| deoxyguanosine kinase [Leuconostoc argentinum KCTC 3773]
          Length = 214

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 76/240 (31%), Gaps = 51/240 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+   +L   L  K             P        L      ++G   
Sbjct: 2   IVLSGTIGAGKTSLTEMLADHLGSK----AFYESVDDNPILP-----LFYENPKKYGFLL 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHL 115
           +               I+ A   G   + DR  + D+           A Q E D  + L
Sbjct: 53  QIYFLNKRLAQ-----IKEARATGVRNILDRSIYEDALLFQLTADLDRATQTEVDIYKSL 107

Query: 116 FLDSLQEIS-VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHE 171
             + + EI+ V++V  PD  I + +  D  L R++ R    E      D           
Sbjct: 108 VDNMMAEIAGVEDVKNPDLLIHVRVSFDTMLARIKKRGRSFEQIDDNPD----------- 156

Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVA-TNILNIVWELVQKRVSPLSSK 222
                + ++ +   D            +D    F  V+  +    V E++  +++ +  K
Sbjct: 157 -LYDYYKELNKRYDDWFDAYDRSPKVQIDGDR-FDFVSDADARAKVLEMIDSKLAEVQDK 214


>gi|325105453|ref|YP_004275107.1| guanylate kinase [Pedobacter saltans DSM 12145]
 gi|324974301|gb|ADY53285.1| guanylate kinase [Pedobacter saltans DSM 12145]
          Length = 189

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 26/174 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCG 58
           M  G  I F    GAGKTT +  L      K        TR   G        + + +  
Sbjct: 1   MKQGKLIIFSAPSGAGKTTIVHHLLNKFPDKISFSISATTRSARGQEVDGKDYYFISNED 60

Query: 59  VDEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                A+ E +    V+       +++ I+    EGK ++ D  +D            + 
Sbjct: 61  FLHKVAKHEFVEFEEVYTGTFYGTLKSEIQRIWDEGKHVIFD--ID-------VEGGLRL 111

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF---ERK 165
                   +++    P          D+  +R+  R +  E    + F   E++
Sbjct: 112 KKKYGENALAIFVQPPSL--------DVLKQRLAGRGTDSEEKLKERFAKAEKE 157


>gi|225851604|ref|YP_002731837.1| putative fructose transport system kinase [Brucella melitensis ATCC
           23457]
 gi|256045851|ref|ZP_05448726.1| putative fructose transport system kinase [Brucella melitensis bv.
           1 str. Rev.1]
 gi|256112565|ref|ZP_05453486.1| putative fructose transport system kinase [Brucella melitensis bv.
           3 str. Ether]
 gi|225639969|gb|ACN99882.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
          Length = 232

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 41  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190


>gi|170084059|ref|XP_001873253.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650805|gb|EDR15045.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 176

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 46/169 (27%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR--FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G  I   G  G GK+TH  LL     L  ++ +V            E  +   L   
Sbjct: 1   MAKGPVIVITGTPGTGKSTHAQLLVEEAALPLRHINV-----------GEWVKEKEL--- 46

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +EF  E E+      R   + + + P + EG ++                       LD
Sbjct: 47  YEEFDQEWESYTVDEDR---LLDELEPIIAEGGVI-----------------------LD 80

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY----SLRESACLDYFE 163
                   E  PD  ++L         R++ R      ++E+   +  E
Sbjct: 81  WHTCEMFPERWPDLVVVLRCDHSTIWDRLEKRGYSLKKIQENNEAEIME 129


>gi|145479919|ref|XP_001425982.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393054|emb|CAK58584.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1384

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 72/226 (31%), Gaps = 59/226 (26%)

Query: 6    FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            F    G  GAGK T  + +      + + VH+        A +  R         E   +
Sbjct: 1199 FFVL-GGPGAGKGTQSAKMVE----RYHFVHL-------SAGDLLRE--------ERSKK 1238

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLFLDSL-- 120
             +         + +E +I+     G+I+     +  S    A Q  +   +   +D    
Sbjct: 1239 TQ-------NAELIEEIIK----SGQIVPS--HITISLLESAMQ-AKGLDKMFLIDGFPR 1284

Query: 121  QEISVQ---EVMPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMI 169
             + +     ++M D          +   +    R++ R         D  E   ++    
Sbjct: 1285 NQENFDVWIKLMGDKVEFKKLFYFECDEETLKNRIKIRAQ-ESGRSDDNDETLVKRLKTY 1343

Query: 170  HEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +E  R   Q F  +++     C  + +    + V   I   + E++
Sbjct: 1344 NESTRPIIQHFDSLSQ-----CIHIKADKPIEEVFQEITKKLDEIL 1384


>gi|156231006|ref|NP_001093554.1| adenylate kinase isoenzyme 5 [Danio rerio]
 gi|148725385|emb|CAN88475.1| novel protein similar to vertebrate adenylate cyclase family [Danio
           rerio]
 gi|148725426|emb|CAN88397.1| novel protein similar to vertebrate adenylate cyclase family [Danio
           rerio]
 gi|148725808|emb|CAN88062.1| novel protein similar to vertebrate adenylate cyclase family [Danio
           rerio]
          Length = 563

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 59/209 (28%), Gaps = 43/209 (20%)

Query: 11  GIEGAGKTTHISLLKRF--LQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  G+GK      ++    L+R      +  E    +      R +L     ++   +  
Sbjct: 384 GGPGSGKALQSEKIEERYSLKRLCPGDILCSELQSHSERGRFLRDLL--ERGEQLPEDTL 441

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SLQEISV 125
             +   A                           S   QG+         +    QE   
Sbjct: 442 LDLLCEAMA-------------------------STVRQGKGFLVTGFPKNEKQAQEYEA 476

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182
           +   PD  ++L+   DI  +R+Q R +    +              +R   F  +     
Sbjct: 477 KMGQPDIVLLLECSADIMSRRLQQRATCSLHSKE-----ARDRDTRRRVDGFCSLINPVV 531

Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIV 208
                 +  H +D+    + V  +I  ++
Sbjct: 532 AHYQHREFFHKIDAEQPPEDVFEHICVVL 560


>gi|82698985|ref|YP_413559.1| putative fructose transport system kinase [Brucella melitensis
           biovar Abortus 2308]
 gi|189023322|ref|YP_001934090.1| Uridine kinase [Brucella abortus S19]
 gi|254690372|ref|ZP_05153626.1| putative fructose transport system kinase [Brucella abortus bv. 6
           str. 870]
 gi|254694860|ref|ZP_05156688.1| putative fructose transport system kinase [Brucella abortus bv. 3
           str. Tulya]
 gi|254696489|ref|ZP_05158317.1| putative fructose transport system kinase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254731402|ref|ZP_05189980.1| putative fructose transport system kinase [Brucella abortus bv. 4
           str. 292]
 gi|256258626|ref|ZP_05464162.1| putative fructose transport system kinase [Brucella abortus bv. 9
           str. C68]
 gi|297247464|ref|ZP_06931182.1| fructose transport system kinase [Brucella abortus bv. 5 str.
           B3196]
 gi|82615086|emb|CAJ10015.1| Uridine kinase:ATP/GTP-binding site motif A (P-loop) [Brucella
           melitensis biovar Abortus 2308]
 gi|189018894|gb|ACD71616.1| Uridine kinase [Brucella abortus S19]
 gi|297174633|gb|EFH33980.1| fructose transport system kinase [Brucella abortus bv. 5 str.
           B3196]
          Length = 232

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 41  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190


>gi|329923749|ref|ZP_08279144.1| ferrichrome ABC transporter, ATP-binding protein FhuC
          [Paenibacillus sp. HGF5]
 gi|328941115|gb|EGG37417.1| ferrichrome ABC transporter, ATP-binding protein FhuC
          [Paenibacillus sp. HGF5]
          Length = 261

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 9/56 (16%)

Query: 7  ISFE--------GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHV 53
          ISFE        G  G GK+T +  L R L+     V +  +P       + AR +
Sbjct: 24 ISFEKGSVYSIIGPNGCGKSTLLKALARQLKPAGGQVLLDSKPLSDLNGKDVARQL 79


>gi|312622717|ref|YP_004024330.1| guanylate kinase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203184|gb|ADQ46511.1| guanylate kinase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 199

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 74/227 (32%), Gaps = 50/227 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  GL I   G  G GK T +  L          +   TR+P            +     
Sbjct: 1   MKEGLLIVISGPAGTGKGTVVGRLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E       + +A    ++    ++ +  AL +G  ++                    L 
Sbjct: 61  EEEIKNERFLEYAEYNNNYYGTPKDFVFEALGKGYDVI--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +++   + +++V  D  +I  LP   +   KR+  R +  E       E           
Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLIKRGTESEDEIRARLE----------- 149

Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215
                IA+++    P+    +++   +    A  I  I+  E ++ R
Sbjct: 150 -----IAKSEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189


>gi|294501642|ref|YP_003565342.1| adenylylsulfate kinase [Bacillus megaterium QM B1551]
 gi|294351579|gb|ADE71908.1| adenylylsulfate kinase [Bacillus megaterium QM B1551]
          Length = 199

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L  KN                  R+ +L      FG     
Sbjct: 32  FTGLSGSGKSTVANAVAKALFDKN-----------------IRNYVLDGDNVRFGLNKNL 74

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              A  R +++     V +  +  G+++L 
Sbjct: 75  GFSAEDRTENIRRIGEVSKLFVDSGQVVLT 104


>gi|226499152|ref|NP_001147633.1| adenylate kinase1 [Zea mays]
 gi|195612740|gb|ACG28200.1| adenylate kinase [Zea mays]
          Length = 284

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 63/238 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
             G   +GK T   L+K   Q  +               +  R  + +   +   A+   
Sbjct: 72  ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 118

Query: 69  IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 +   V + I          +P   E    L D +  S          SQ + L+
Sbjct: 119 ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 165

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164
           +L+      + PD  I+LD+P ++ ++RV  R                           +
Sbjct: 166 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 219

Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +     EK         Q    +     +    V    +  +V   I  ++  +++K+
Sbjct: 220 RFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 277


>gi|197294243|ref|YP_001798784.1| guanylate kinase [Candidatus Phytoplasma australiense]
 gi|171853570|emb|CAM11440.1| Guanylate kinase [Candidatus Phytoplasma australiense]
          Length = 212

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 34/179 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLS 56
             GL I   G  G GK T    L    + KN++        TR+P      E   +  L+
Sbjct: 5   QKGLLIVLSGPSGVGKATVRKAL---FEMKNHNFVYSISSTTRKPRLGEQ-EGKDYYFLT 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               E G +    +  A  +D+        +   L EGK +                   
Sbjct: 61  KEEFELGIKNNKFLEWAKFIDNYYGTSRKQVEDYLKEGKEVFL----------------- 103

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMI 169
             + ++   ++  ++   +   I  +P +  +  +R++ R +           + D   
Sbjct: 104 -EIEVEGATQLRKKKFR-NAVFIFLVPPEKKVLYERLKKRGTESADKIQQRIMKADKEF 160


>gi|150020866|ref|YP_001306220.1| adenylate kinase [Thermosipho melanesiensis BI429]
 gi|166220003|sp|A6LLN4|KAD_THEM4 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|149793387|gb|ABR30835.1| Adenylate kinase [Thermosipho melanesiensis BI429]
          Length = 214

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 48/232 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  GAGK T+   LK  L         T   G     E +    L   V++     
Sbjct: 3   IVFLGPPGAGKGTYAKELKEIL---GIPHIST---GDMFREEISAKSELGRKVEDILKRG 56

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E +      +   E + +P   +G   + D +   + A     D         L + +  
Sbjct: 57  ELVPDDLTNVIVKERLSKPDCKKGF--ILDGYPR-TVAQAKALDEILKKLGREL-KFA-- 110

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFERKDV 167
                  I  ++  D+ +KR+ NR   +    +                   + ++R+D 
Sbjct: 111 -------IYFEVSEDVVVKRISNRRICKNCGKIYNLITLPPKINGKCDVCGGELYQRED- 162

Query: 168 MIHEKRRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILNIVWE 210
              E  R+ +               + ++   VD +    SV   +LNI+  
Sbjct: 163 DREEVVRRRYKVYMDNTYPVIEYYRKSNKLFTVDGSMDVDSVIKEVLNIIRR 214


>gi|160880209|ref|YP_001559177.1| hypothetical protein Cphy_2070 [Clostridium phytofermentans ISDg]
 gi|160428875|gb|ABX42438.1| hypothetical protein Cphy_2070 [Clostridium phytofermentans ISDg]
          Length = 262

 Score = 40.4 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          M + +FI  EG+ G GK+T +  L   L+   Y V 
Sbjct: 1  MKNIIFI--EGVSGVGKSTTVHKLSDKLRSLGYSVK 34


>gi|310288003|ref|YP_003939262.1| Adenylate kinase [Bifidobacterium bifidum S17]
 gi|311064876|ref|YP_003971602.1| adenylate kinase [Bifidobacterium bifidum PRL2010]
 gi|309251940|gb|ADO53688.1| Adenylate kinase [Bifidobacterium bifidum S17]
 gi|310867196|gb|ADP36565.1| Adk Adenylate kinase [Bifidobacterium bifidum PRL2010]
          Length = 187

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 41/211 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G +G GK T  +LL             T   G            L     ++  + E + 
Sbjct: 7   GPQGVGKGTQAALLAEHY---GIPAIST---GDIFRYNIKNKTELGLEALKYTDKGELVP 60

Query: 71  FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEISV 125
                 +    +++  L     +   +L D +          R++SQ   LD+ L+E+  
Sbjct: 61  -----DELTNKIVKDRLAMDDAKNGWIL-DGY---------PRNASQVKALDAMLEELGT 105

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181
                D  + LD   D+ ++R+  R    +    D  E        KR   +      + 
Sbjct: 106 PL---DKVVALDADHDVLMQRIAKRAQ-EQGRSDDTPEA-----IAKRLATYAKETAPLL 156

Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWE 210
                R     +D      ++  NI+  + +
Sbjct: 157 DTYKSRGQLVAIDGVGDIDAIQANIVAALSD 187


>gi|300724327|ref|YP_003713645.1| putative bifunctional sulfate adenylyltransferase/adenylyl-sulfate
           kinase [Xenorhabdus nematophila ATCC 19061]
 gi|297630862|emb|CBJ91533.1| putative bifunctional enzyme: sulfate adenylyltransferase and
           Adenylyl-sulfate kinase [Xenorhabdus nematophila ATCC
           19061]
          Length = 642

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 20/95 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I F G+ G+GK+T  + L++ L  +    +                 +L      
Sbjct: 467 HRGKVIWFTGLPGSGKSTLANALEQELYNQGKSTY-----------------VLDGDNIR 509

Query: 62  FGAEAEAIVFAAARLD---HVENVIRPALMEGKIL 93
            G   +     A R++    V  V R  +  G I+
Sbjct: 510 QGINKDLGFTDADRVENIRRVAEVARLMMDAGLIV 544


>gi|66818279|ref|XP_642799.1| signal recognition particle receptor alpha subunit [Dictyostelium
           discoideum AX4]
 gi|74856964|sp|Q54ZR7|SRPR_DICDI RecName: Full=Signal recognition particle receptor subunit alpha;
           Short=SR-alpha; Short=Signal recognition particle
           receptor; AltName: Full=Docking protein alpha;
           Short=DP-alpha
 gi|60470903|gb|EAL68875.1| signal recognition particle receptor alpha subunit [Dictyostelium
           discoideum AX4]
          Length = 615

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 13/129 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GK+T+++ +  +L    Y   +      T  + A     L    D      
Sbjct: 410 IVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAA--CDTFRSGAIEQ--LKTHADRLNVHL 465

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               ++       ++ I  A   G  ++    +D++      R  +    + +L ++  Q
Sbjct: 466 FERGYSKDAASVAQDAIAFAKDTGYDVVL---IDTT-----GRMQNNEPLMKALSKLVNQ 517

Query: 127 EVMPDCTII 135
             + D  + 
Sbjct: 518 NNV-DLVLF 525


>gi|320166184|gb|EFW43083.1| adenylate kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 229

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 62/218 (28%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    + +      + VH++              +L +          E   
Sbjct: 48  GGPGSGKGTQCERIVQEF---GF-VHLSAG-----------DLLRAERAKPASKNGEL-- 90

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125
                       I   + EGKI+   +      +  A     + ++   +D     + +V
Sbjct: 91  ------------IDKYIREGKIVPVQI----TCTLLAEAMALNPTKSFLIDGFPRNQDNV 134

Query: 126 QE----VMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                 V P    D  +  D P    ++R   R  L      D  E      H      +
Sbjct: 135 AGWDAVVGPSVNLDFVLFFDCPEATCVQRALQRG-LTSGRTDDNKESLTKRFH-----TY 188

Query: 178 LDIARNQP-----DR---CHIVDSAHSFQSVATNILNI 207
              +   P     DR      +DS  S   V  ++  +
Sbjct: 189 E--SETMPIVNYFDRKGLVRKIDSTRSVDEVFADVKKV 224


>gi|319956651|ref|YP_004167914.1| adenylate kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419055|gb|ADV46165.1| Adenylate kinase [Nitratifractor salsuginis DSM 16511]
          Length = 199

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 80/223 (35%), Gaps = 42/223 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LF+   G  G+GKTT   ++      +N D  V          E  R  + S    
Sbjct: 1   MAKKLFLII-GAPGSGKTTDAEIIAE----RNPDSVV-----HYSTGEMLRQEVASGS-- 48

Query: 61  EFGAEAEAIVFAAAR--LDHVENVIRPALME--GKILLCD---RFLDSSYAYQGERDSSQ 113
           E G E E+ +   A   LD V N I  A+     +I+L D   R ++   A         
Sbjct: 49  ELGKEIESYISRGALVPLDIVINTIVNAVKNAPKEIILIDGFPRSVEQMKALDEILSKDP 108

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            + L ++ E+              +   +  +R+  R    E    D  + ++V   ++ 
Sbjct: 109 EIELKAVIEV-------------RVSEAVARERILGRAEEAEVKRSD--DNEEV-FKQRM 152

Query: 174 RQIFL----DIAR--NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +I+L    +I +   +     ++D     + +   +   + E
Sbjct: 153 -KIYLDPLPEIEKFYEEKGLLKVIDGERPIEPIVEEMEAFIKE 194


>gi|148909626|gb|ABR17904.1| unknown [Picea sitchensis]
          Length = 338

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 36/149 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  +     +T               +L      
Sbjct: 159 QKGCVIWITGLSGSGKSTLACALSRVLHSRGR---LTY--------------ILDGDNVR 201

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
            G        A  R +++     V R  +  G  ++C   + S  + YQ +RD+ + L  
Sbjct: 202 HGLNKNLSFSAEDRAENIRRIGEVARLFVDAG--VIC---ITSLISPYQRDRDACRALL- 255

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146
                   + +     I +D P++I  +R
Sbjct: 256 -----PVGEFIE----IFMDFPLEICEQR 275


>gi|149277912|ref|ZP_01884052.1| adenylyl-sulfate kinase [Pedobacter sp. BAL39]
 gi|149231600|gb|EDM36979.1| adenylyl-sulfate kinase [Pedobacter sp. BAL39]
          Length = 182

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 38/164 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L+  L      +   R  G           L        G       
Sbjct: 17  GLSGAGKSTIAVALEAMLTEN--QLFCVRLDGDG---------LRDGVNKGLG------F 59

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A R ++V     + R       I++C                S    L+  +EI+   
Sbjct: 60  THADRAENVRRTSEIARLLCNNNVIVIC----------------SLITPLNEHREIARSI 103

Query: 128 VMPDCT-IILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMI 169
           +  D   + +D P+++  +R V+  Y    +  ++ F       
Sbjct: 104 LKEDLLEVFVDCPLEVCEQRDVKGLYRKARNHQINKFSGVSSEF 147


>gi|126736680|ref|ZP_01752419.1| putative fructose transport system kinase [Roseobacter sp. CCS2]
 gi|126713795|gb|EBA10667.1| putative fructose transport system kinase [Roseobacter sp. CCS2]
          Length = 213

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          + ++  G  G GK+T  S L R L  +     V    G
Sbjct: 23 MLVAITGAPGCGKSTLASELARRLNAQGRKAIVVPMDG 60


>gi|289449964|ref|YP_003475731.1| guanylate kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184511|gb|ADC90936.1| guanylate kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 206

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 6/100 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  G GK T I+  K   +   + V   TR P        + +       +
Sbjct: 7   QQGLLICVSGPSGVGKGTVIAAAKELCRNLVHSVSVTTRAPRLGEIEGVSYYFRSKTNFE 66

Query: 61  EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
           +  A+ E +       +H        I   +  G  ++ D
Sbjct: 67  QMLADGEILEHDCY-CEHYYGTPLRPIEEKMRAGIDVIMD 105


>gi|260563141|ref|ZP_05833627.1| uridine kinase [Brucella melitensis bv. 1 str. 16M]
 gi|265992267|ref|ZP_06104824.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994007|ref|ZP_06106564.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265999689|ref|ZP_05467420.2| uridine kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|260153157|gb|EEW88249.1| uridine kinase [Brucella melitensis bv. 1 str. 16M]
 gi|262764988|gb|EEZ10909.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003333|gb|EEZ15626.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263095342|gb|EEZ18969.1| uridine kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408074|gb|ADZ65139.1| putative fructose transport system kinase [Brucella melitensis M28]
 gi|326537790|gb|ADZ86005.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 218

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 27  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 87  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176


>gi|119715340|ref|YP_922305.1| exonuclease V subunit alpha [Nocardioides sp. JS614]
 gi|119536001|gb|ABL80618.1| ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase
           superfamily I member-like protein [Nocardioides sp.
           JS614]
          Length = 872

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G  +  EG  GAGKTT +   +  L R  + + V 
Sbjct: 452 GQLVVVEGAAGAGKTTALRATRELLARHGHRLVVV 486


>gi|62289048|ref|YP_220841.1| putative fructose transport system kinase [Brucella abortus bv. 1
           str. 9-941]
 gi|260546341|ref|ZP_05822081.1| uridine kinase [Brucella abortus NCTC 8038]
 gi|260755918|ref|ZP_05868266.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260759142|ref|ZP_05871490.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260760866|ref|ZP_05873209.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884941|ref|ZP_05896555.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261215193|ref|ZP_05929474.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|62195180|gb|AAX73480.1| kinase-related protein [Brucella abortus bv. 1 str. 9-941]
 gi|260096448|gb|EEW80324.1| uridine kinase [Brucella abortus NCTC 8038]
 gi|260669460|gb|EEX56400.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671298|gb|EEX58119.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676026|gb|EEX62847.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260874469|gb|EEX81538.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260916800|gb|EEX83661.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 218

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 27  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 87  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176


>gi|23500977|ref|NP_697104.1| putative fructose transport system kinase [Brucella suis 1330]
 gi|161618051|ref|YP_001591938.1| putative fructose transport system kinase [Brucella canis ATCC
           23365]
 gi|163842338|ref|YP_001626742.1| putative fructose transport system kinase [Brucella suis ATCC
           23445]
 gi|254700875|ref|ZP_05162703.1| putative fructose transport system kinase [Brucella suis bv. 5 str.
           513]
 gi|254705241|ref|ZP_05167069.1| putative fructose transport system kinase [Brucella suis bv. 3 str.
           686]
 gi|254707240|ref|ZP_05169068.1| putative fructose transport system kinase [Brucella pinnipedialis
           M163/99/10]
 gi|254709218|ref|ZP_05171029.1| putative fructose transport system kinase [Brucella pinnipedialis
           B2/94]
 gi|254713360|ref|ZP_05175171.1| putative fructose transport system kinase [Brucella ceti M644/93/1]
 gi|254716285|ref|ZP_05178096.1| putative fructose transport system kinase [Brucella ceti M13/05/1]
 gi|256030741|ref|ZP_05444355.1| putative fructose transport system kinase [Brucella pinnipedialis
           M292/94/1]
 gi|256158755|ref|ZP_05456625.1| putative fructose transport system kinase [Brucella ceti M490/95/1]
 gi|256254147|ref|ZP_05459683.1| putative fructose transport system kinase [Brucella ceti B1/94]
 gi|260169645|ref|ZP_05756456.1| putative fructose transport system kinase [Brucella sp. F5/99]
 gi|23346835|gb|AAN29019.1| kinase-related protein [Brucella suis 1330]
 gi|161334862|gb|ABX61167.1| Hypothetical protein BCAN_A0063 [Brucella canis ATCC 23365]
 gi|163673061|gb|ABY37172.1| Hypothetical protein BSUIS_A0065 [Brucella suis ATCC 23445]
          Length = 232

 Score = 40.4 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 41  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190


>gi|294461870|gb|ADE76492.1| unknown [Picea sitchensis]
          Length = 188

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 18/127 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
           G  G+GK+T+   L++  +     VH+       E      A   R ++ L   +DE   
Sbjct: 9   GPAGSGKSTYCYNLQQHCESIGRSVHIVNLDPAAEDFKYSVAIDIRELISLEDVMDELNL 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-------HLFL 117
                +     ++H+E  +   L E    L D   D    +                 F+
Sbjct: 69  GPNGGLIYC--MEHLEENLEDWLAEQ---LEDYLDDDYLVFDCPGQIELYSHIPVFRTFV 123

Query: 118 DSLQEIS 124
           D L+  +
Sbjct: 124 DQLRRWN 130


>gi|227893866|ref|ZP_04011671.1| deoxyguanosine kinase [Lactobacillus ultunensis DSM 16047]
 gi|227864355|gb|EEJ71776.1| deoxyguanosine kinase [Lactobacillus ultunensis DSM 16047]
          Length = 228

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 31/168 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121
           +  A +     L+   + I+ AL +   +L DR +   +  +Q   D  +     +D+  
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTQDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106

Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           E+    + E+       PD  + +++  D  +KR++ R    E    D
Sbjct: 107 ELLHNMMGELKRMPKKNPDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 154


>gi|224827259|ref|ZP_03700353.1| signal recognition particle-docking protein FtsY [Lutiella
           nitroferrum 2002]
 gi|224600548|gb|EEG06737.1| signal recognition particle-docking protein FtsY [Lutiella
           nitroferrum 2002]
          Length = 358

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L ++ Q +   V +    G T  A A   ++     +     A+   
Sbjct: 165 GVNGAGKTTSIGKLAKYFQSQGKSVLLAA--GDTFRAAAREQLIAWGERNNVTVIAQQ-- 220

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            +        + I+ A   G  I+L D
Sbjct: 221 -SGDSAAVCFDAIKAAQARGIDIVLAD 246


>gi|118474779|ref|YP_892249.1| PvdS [Campylobacter fetus subsp. fetus 82-40]
 gi|118414005|gb|ABK82425.1| PvdS [Campylobacter fetus subsp. fetus 82-40]
          Length = 276

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 26/95 (27%), Gaps = 28/95 (29%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG + +GK   I  L   L  +   V    +P      +                 
Sbjct: 46  LIIIEGRDASGKGGVIKRLTEHLNPRGCRVVALEKPSDVERTQW---------------- 89

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                +     DH+          G+I++ DR   
Sbjct: 90  -----YFQRYSDHLP-------SAGEIVIFDRSWY 112


>gi|86609333|ref|YP_478095.1| CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
          [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557875|gb|ABD02832.1| CobQ/CobB/MinD/ParA nucleotide binding domain [Synechococcus sp.
          JA-2-3B'a(2-13)]
          Length = 266

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
          G+GKTT    L   L      + V  +P G          +    + E    AE I+  A
Sbjct: 17 GSGKTTAALNLAIMLAEHGKTLAVDFDPQGN-----LSQWMGWTDLSESATIAETILPGA 71

Query: 74 ARLDHVENVIRPALMEGK 91
           R+ H+  +IRP L E +
Sbjct: 72 DRV-HIREIIRPPLNEDR 88


>gi|321472925|gb|EFX83894.1| hypothetical protein DAPPUDRAFT_47611 [Daphnia pulex]
          Length = 212

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 76/220 (34%), Gaps = 37/220 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++GL I      GAGKTT    L    +R    +  T  P      E   +  LS    
Sbjct: 1   MSNGLLIILSSPSGAGKTTVCRRLLAEDERLMLSISATTGPPRAAEKEGMDYFFLSPEAF 60

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                  A +  A  LD+        ++    EGK +L D  +D    +QG R  SQ + 
Sbjct: 61  HAWILEGAFLEYAPVLDNWYGTPREAVQARFAEGKDILFD--VD----WQGGRAISQKI- 113

Query: 117 LDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                        P+ T+ I  LP    LK ++ R   R     +           +  Q
Sbjct: 114 -------------PERTVRIFILPP--SLKELERRLKGRNQDPEEII-------QRRMAQ 151

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQK 214
              +I+        +V+          N+ +I+  E ++K
Sbjct: 152 AQQEISHWAEYDYVLVN--EDLDETVHNVKSIIQAERLKK 189


>gi|315178771|gb|ADT85685.1| signal recognition particle GTPase [Vibrio furnissii NCTC 11218]
          Length = 403

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 206 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQIWGERNNVPVIAQH-- 261

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 262 TGADSASVIYDAIEAAKARGVDVVIAD 288


>gi|78212579|ref|YP_381358.1| hypothetical protein Syncc9605_1045 [Synechococcus sp. CC9605]
 gi|78197038|gb|ABB34803.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 179

 Score = 40.0 bits (93), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 20/86 (23%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G  G+GK+T  ++L   L     +V  T         +A R   L    +     +E   
Sbjct: 13 GPPGSGKSTLAAILAPLLSA---EVIST---------DALRE-QLWGDANVQSPWSELEP 59

Query: 71 FAAARLDHVENVIRPALMEGKILLCD 96
                 H+   I  A+ +G  +L D
Sbjct: 60 -------HLHGAIDRAIADGDNVLVD 78


>gi|261218064|ref|ZP_05932345.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261221292|ref|ZP_05935573.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261314721|ref|ZP_05953918.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261316721|ref|ZP_05955918.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261321088|ref|ZP_05960285.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261751387|ref|ZP_05995096.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261755951|ref|ZP_05999660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261759177|ref|ZP_06002886.1| uridine kinase [Brucella sp. F5/99]
 gi|265987792|ref|ZP_06100349.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265997253|ref|ZP_06109810.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|260919876|gb|EEX86529.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|260923153|gb|EEX89721.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261293778|gb|EEX97274.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261295944|gb|EEX99440.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261303747|gb|EEY07244.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261739161|gb|EEY27157.1| uridine kinase [Brucella sp. F5/99]
 gi|261741140|gb|EEY29066.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261745704|gb|EEY33630.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|262551721|gb|EEZ07711.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264659989|gb|EEZ30250.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
          Length = 218

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 27  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 87  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176


>gi|163846277|ref|YP_001634321.1| adenylylsulfate kinase [Chloroflexus aurantiacus J-10-fl]
 gi|163667566|gb|ABY33932.1| Adenylyl-sulfate kinase [Chloroflexus aurantiacus J-10-fl]
          Length = 188

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           SGL + F G+ GAGKTT    L   LQ   Y V
Sbjct: 10 RSGLVVWFTGLSGAGKTTLARALATLLQEAGYPV 43


>gi|256395670|ref|YP_003117234.1| uridine kinase [Catenulispora acidiphila DSM 44928]
 gi|256361896|gb|ACU75393.1| uridine kinase [Catenulispora acidiphila DSM 44928]
          Length = 248

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 25/159 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           ++ +G   +GKTT    L   L+ +  DV   T +    P AE  R    S         
Sbjct: 48  VAIDGAPASGKTTLADELATVLRAQGRDVIRATIDDFLFPRAERYRRGQYS--------- 98

Query: 66  AEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           AE+  F A     +  V+   L  G     +  + DR  D+  +       +  + L   
Sbjct: 99  AESCYFDAHDRAALCRVLLDPLGPGGDRKFQTSVYDRDTDTPLSLPAAAAPTDAVLLFD- 157

Query: 121 QEISVQEVMPDCT------IILDLPVDIGLKRVQNRYSL 153
               V  + P+        I + LP++  + R ++R + 
Sbjct: 158 ---GVFLLRPELIDRWDLRIFVSLPLEQTIDRARSRGTA 193


>gi|222524033|ref|YP_002568503.1| adenylylsulfate kinase [Chloroflexus sp. Y-400-fl]
 gi|254766499|sp|B9LKC1|CYSC_CHLSY RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
          AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|222447912|gb|ACM52178.1| Adenylyl-sulfate kinase [Chloroflexus sp. Y-400-fl]
          Length = 186

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           SGL + F G+ GAGKTT    L   LQ   Y V
Sbjct: 8  RSGLVVWFTGLSGAGKTTLARALATLLQEAGYPV 41


>gi|34499658|ref|NP_903873.1| cell division protein FtsY [Chromobacterium violaceum ATCC 12472]
 gi|34105508|gb|AAQ61863.1| cell division protein FtsY [Chromobacterium violaceum ATCC 12472]
          Length = 375

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L ++ Q +   V +    G T  A A   ++     +     A+   
Sbjct: 182 GVNGAGKTTSIGKLAKYYQSQGKSVLLAA--GDTFRAAAREQLIAWGERNNVTVIAQQ-- 237

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + I+ A+  G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 238 -GGDSAAVCYDAIQAAIARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVIQK 287

Query: 128 VMPD----CTIILD 137
            +PD      ++LD
Sbjct: 288 ALPDAPHEVVLVLD 301


>gi|89898640|ref|YP_515750.1| cytidylate kinase [Chlamydophila felis Fe/C-56]
 gi|123482865|sp|Q253D3|KCY_CHLFF RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|89332012|dbj|BAE81605.1| cytidylate kinase [Chlamydophila felis Fe/C-56]
          Length = 216

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + L+
Sbjct: 1  MIITIDGPSGTGKSTVAKALAQRLK 25


>gi|118579776|ref|YP_901026.1| cytidylate kinase [Pelobacter propionicus DSM 2379]
 gi|118502486|gb|ABK98968.1| cytidylate kinase [Pelobacter propionicus DSM 2379]
          Length = 233

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL 28
           GL I+ +G  GAGK+T   LL + L
Sbjct: 6  RGLVIAIDGPSGAGKSTIARLLAKRL 31


>gi|256077332|ref|XP_002574960.1| thymidine kinase [Schistosoma mansoni]
 gi|238660179|emb|CAZ31193.1| thymidine kinase, putative [Schistosoma mansoni]
          Length = 945

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 19/201 (9%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-EAE 67
            EG  G GK+T +   ++ L  KN  +H                ++           +A+
Sbjct: 2   VEGNIGCGKSTFLRYFQQ-LSPKNEVMHEPLYLWKDARGYDLFELMYHDQRRWSVPFQAQ 60

Query: 68  AIVFAAARLDHVENVIRP--ALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLDSLQEIS 124
            +V    R    +   +P   L         R+  + +    G    + +  L  + +  
Sbjct: 61  VLVTLLDR--QSKPPTKPVRLLERSIH--SSRYCFTENMHNNGSISDADYEELLKIFQWI 116

Query: 125 VQEV-MP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL--D 179
           ++   +P D  + L     +  +R++ R    E    L Y E     +HE   + +L   
Sbjct: 117 LKNKSVPVDLIVYLRASPTVCFERLRARNRSGEEDIPLKYLE----DLHE-LHEAWLIER 171

Query: 180 IARNQPDRCHIVDSAHSFQSV 200
                P    + D       +
Sbjct: 172 RFGQLPAPILVFDCNAPLPEL 192


>gi|320451077|ref|YP_004203173.1| cytidylate kinase [Thermus scotoductus SA-01]
 gi|320151246|gb|ADW22624.1| cytidylate kinase [Thermus scotoductus SA-01]
          Length = 212

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 36/224 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL----QRKNY----DVHVTREPGGTPAAEAARHVLLSCG 58
           ++ +G   +GK++    +   L               ++ R  G  P  E     LL   
Sbjct: 5   VTIDGPSASGKSSVAKKVAEALGVPYLSSGLLYRAAAYLARRVGVDPGDEPGILALLETY 64

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 E +     A +   +E++  P L   ++   DR + S  A      +  +  L 
Sbjct: 65  RVRLLPEVQGNRVVAEKASTLEDL-TPYLHTPEV---DR-VVSQVARHPGVRAWVNERLR 119

Query: 119 SL----------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +             +V    P     L    ++   R + R   R     DY E    +
Sbjct: 120 EVPPPFVAEGRDMGTAVFPQAPHK-FYLTATPEV---RARRRTLERPQ---DYQE----V 168

Query: 169 IHEKRRQIFLDIARNQPD-RCHIVDSAH-SFQSVATNILNIVWE 210
           + E  R+  LD A++ P     ++D++  + + V   +L+ + +
Sbjct: 169 LQELIRRDELDRAQSAPAPEAIVIDTSGMTLEEVVARVLSHIQD 212


>gi|184200282|ref|YP_001854489.1| adenylate kinase [Kocuria rhizophila DC2201]
 gi|259494008|sp|B2GJ13|KAD_KOCRD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|183580512|dbj|BAG28983.1| adenylate kinase [Kocuria rhizophila DC2201]
          Length = 188

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 65/219 (29%), Gaps = 40/219 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSC 57
           M   + I   G  GAGK T  + +   L         T +          E  R      
Sbjct: 1   MTR-MLII--GPPGAGKGTQAARISERL---GVPAISTGDIFRANIKDQTELGREAQRYT 54

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                  ++        RL H E+V    L++G                  R  +Q   L
Sbjct: 55  DAGNLVPDSVTNEMVRDRLSH-EDVSGGFLLDGY----------------PRTVAQVEEL 97

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D + E +   +  D  ++L    D  + R+  R   +E    D  + +DV+ H     ++
Sbjct: 98  DRILEANGVGL--DVVLLLTADNDELVSRLLGR--AQEQGRTD--DTEDVIRHR--LDVY 149

Query: 178 LDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWE 210
            +                 VD   S   V   I+  +  
Sbjct: 150 DEQTAPVVGVYEDRGIVVRVDGLGSIDHVTERIMAALER 188


>gi|156387610|ref|XP_001634296.1| predicted protein [Nematostella vectensis]
 gi|156221377|gb|EDO42233.1| predicted protein [Nematostella vectensis]
          Length = 191

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 5/95 (5%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  G+GK+T +  L K +     + V H TR+P          +      +++   
Sbjct: 6   IVIHGPSGSGKSTLVKRLMKEYPDTFGFSVSHTTRQPRPGEINGKDYNFTERGIMEKAIE 65

Query: 65  EAEAIVFAAARLDHV---ENVIRPALMEGKILLCD 96
             E + FA    +     +  ++  +  GK+ + D
Sbjct: 66  NGEFLEFAEYNQNLYGTSKKAVQDVIHVGKVCILD 100


>gi|148263531|ref|YP_001230237.1| cytidylate kinase [Geobacter uraniireducens Rf4]
 gi|146397031|gb|ABQ25664.1| cytidylate kinase [Geobacter uraniireducens Rf4]
          Length = 240

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
           +GL ++ +G  GAGK+T   LL   L
Sbjct: 10 KNGLIVAIDGPSGAGKSTITKLLAERL 36


>gi|260767577|ref|ZP_05876513.1| signal recognition particle receptor protein FtsY [Vibrio furnissii
           CIP 102972]
 gi|260617477|gb|EEX42660.1| signal recognition particle receptor protein FtsY [Vibrio furnissii
           CIP 102972]
          Length = 405

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 208 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQIWGERNNVPVIAQH-- 263

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 264 TGADSASVIYDAIEAAKARGVDVVIAD 290


>gi|158333400|ref|YP_001514572.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158303641|gb|ABW25258.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1191

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I+  G+ G GKT+    L + LQ + YD  + R     PA E+    LLS  +     
Sbjct: 129 RLITILGMGGVGKTSLAVKLAQELQDQ-YDTVIFRSLRNAPAVES----LLSQLIQVLSH 183

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
             E  VF +   D +  +++       +L+ D
Sbjct: 184 HQETRVFESI-ADLLSRLVQHLQERRCLLILD 214


>gi|4504221|ref|NP_000849.1| guanylate kinase isoform b [Homo sapiens]
 gi|226874833|ref|NP_001152863.1| guanylate kinase isoform b [Homo sapiens]
 gi|2497498|sp|Q16774|KGUA_HUMAN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|1196436|gb|AAC37598.1| guanylate kinase [Homo sapiens]
 gi|1513315|gb|AAC50659.1| guanylate kinase [Homo sapiens]
 gi|13623297|gb|AAH06249.1| Guanylate kinase 1 [Homo sapiens]
 gi|14602820|gb|AAH09914.1| Guanylate kinase 1 [Homo sapiens]
 gi|48145789|emb|CAG33117.1| GUK1 [Homo sapiens]
 gi|49456965|emb|CAG46803.1| GUK1 [Homo sapiens]
 gi|55959196|emb|CAI15066.1| guanylate kinase 1 [Homo sapiens]
 gi|60551637|gb|AAH91480.1| GUK1 protein [Homo sapiens]
 gi|119590257|gb|EAW69851.1| guanylate kinase 1, isoform CRA_a [Homo sapiens]
 gi|119590264|gb|EAW69858.1| guanylate kinase 1, isoform CRA_a [Homo sapiens]
          Length = 197

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 47/226 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 1   MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 44

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G +              R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 45  -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +         
Sbjct: 99  VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 155

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +           +  +P    +V    S       +   + E ++K
Sbjct: 156 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 191


>gi|302872129|ref|YP_003840765.1| guanylate kinase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574988|gb|ADL42779.1| guanylate kinase [Caldicellulosiruptor obsidiansis OB47]
          Length = 199

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 73/227 (32%), Gaps = 50/227 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M +GL I   G  G GK T +  L          +   TR+P            +     
Sbjct: 1   MRNGLLIVISGPAGTGKGTVVGKLLEKNPNIKLSISKTTRKPRPGEKEGMNYFFVSREQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E       + +A    ++    ++ +   L +G  ++                    L 
Sbjct: 61  EEEIKNERFLEYAEYNNNYYGTPKDFVFETLEKGFDVI--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +++   + +++V  D  +I  LP   +   KR+  R +  E       E           
Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLVKRGTESEDEIKARLE----------- 149

Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215
                IA+N+    P+    +++   +       I  I+  E ++ R
Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDATEKIQKIIEVEKLKSR 189


>gi|237710836|ref|ZP_04541317.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|317474069|ref|ZP_07933348.1| hypothetical protein HMPREF1016_00327 [Bacteroides eggerthii
           1_2_48FAA]
 gi|229455558|gb|EEO61279.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|316909911|gb|EFV31586.1| hypothetical protein HMPREF1016_00327 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 181

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 41/221 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S++ +     +  VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGSPGTGKTTIASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL+  
Sbjct: 60  QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  ++    C I+L    +  +KR   R      + LD   + +V + E   + F ++
Sbjct: 97  RALVREDYEVHC-IVLRASKEETMKRAVER------SKLDR--KTNVELVETMWEQFCNL 147

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220
              + +   ++D+   S        ++ V E +  R + LS
Sbjct: 148 GIYESN---VIDTTTYSI----QETVSAVQEKIASRAALLS 181


>gi|254167582|ref|ZP_04874433.1| ArgK protein [Aciduliprofundum boonei T469]
 gi|197623391|gb|EDY35955.1| ArgK protein [Aciduliprofundum boonei T469]
          Length = 267

 Score = 40.0 bits (93), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----HVTREP--GGTPAAEAAR 51
            G  I F G  G GK+T I  +   L      V       R P  GG+   +  R
Sbjct: 46  KGRIICFTGPPGVGKSTLIDHVISILTEGGKKVGVILVDPRSPYTGGSLLGDRIR 100


>gi|326436687|gb|EGD82257.1| cytidylate kinase [Salpingoeca sp. ATCC 50818]
          Length = 228

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 46/156 (29%), Gaps = 35/156 (22%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCG 58
           FI F  G  G+GK T  + +        +    T +         +P AE  + ++    
Sbjct: 43  FIVFVLGGPGSGKGTQCAKIAEEF---GFKHVSTGDLFRDEVKKDSPRAEKVKEIMKEGK 99

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +       E +   A  ++ +       +     +L D F                  + 
Sbjct: 100 LIPTELTLEIL---ADAMESLVAASGSDIK----VLLDGF---------------PREIS 137

Query: 119 SLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYS 152
            + +   +    DC      D+P ++   R   R  
Sbjct: 138 QVHDFKKKFER-DCNFALYFDVPAEVMKDRCLKRGQ 172


>gi|323340395|ref|ZP_08080652.1| adenylate kinase [Lactobacillus ruminis ATCC 25644]
 gi|323092171|gb|EFZ34786.1| adenylate kinase [Lactobacillus ruminis ATCC 25644]
          Length = 219

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 73/250 (29%), Gaps = 89/250 (35%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T    +    +        T         +  R  + +      G EA+  +
Sbjct: 9   GLPGAGKGTQAEKIVDEYK---IPHIST--------GDIFRAAMKNG--TPMGLEAKKFI 55

Query: 71  FAAARLDHVEN-----VIRPALMEGKILLCDRFLDS----SYAYQGERDSSQHLFLDSLQ 121
               + + V +     +++  L +    + D ++      + A     D        SL 
Sbjct: 56  ---DKGELVPDEVTNGIVKERLAKDD--VNDGYMLDGFPRNMAQAEALDEFGKELGKSLN 110

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------------DY 161
                     C I + +  +  ++R+  RY  R+                        ++
Sbjct: 111 ----------CVINIHVDPESLMERLTGRYICRDCGATYHKVFNPTKVEGTCDRCGGHEF 160

Query: 162 FERKD--------------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201
           F+R+D                    +  ++K  Q  L          H V+       V 
Sbjct: 161 FQREDDKPETVKNRLDVNIKMNTPLLDFYKK--QGLL----------HEVNGNQDIDKVF 208

Query: 202 TNILNIVWEL 211
            +I  I+ ++
Sbjct: 209 ADIKEILDQI 218


>gi|17567503|ref|NP_509884.1| hypothetical protein F38B2.4 [Caenorhabditis elegans]
 gi|20455034|sp|Q20140|KAD1_CAEEL RecName: Full=Probable adenylate kinase isoenzyme F38B2.4;
           Short=AK; AltName: Full=ATP-AMP transphosphorylase
 gi|12276048|gb|AAG50236.1|AF304123_1 adenylate kinase 1 [Caenorhabditis elegans]
 gi|3876832|emb|CAA90364.1| C. elegans protein F38B2.4a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 210

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 41/219 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
            FI   G  G+GK T               +          + +  R  + S      + 
Sbjct: 23  FFIV--GGPGSGKGTQCD-----------KIVAKYGLTHLSSGDLLRDEVKSGSPRGAQL 69

Query: 63  GAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            A  E  A+V     LD V+  +  A+ +G       FL   Y  +  +       +   
Sbjct: 70  TAIMESGALVPLEVVLDLVKEAMLKAIEKG----SKGFLIDGYPREVAQGQQFESEIQEA 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQ 175
           +            +  D+  +  +KR+ +R   S R     D  +++             
Sbjct: 126 K----------LVLFFDVAEETLVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVVD 175

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +         +   +++  S   +   ++  + +   K
Sbjct: 176 YY-----ESKGKLVRINAEGSVDDIFAVVVANLDKATSK 209


>gi|14590947|ref|NP_143021.1| adenylate kinase [Pyrococcus horikoshii OT3]
 gi|9972408|sp|O58844|KAD_PYRHO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|3257533|dbj|BAA30216.1| 220aa long hypothetical adenylate kinase [Pyrococcus horikoshii
           OT3]
          Length = 220

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 50/226 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK+T    +                     + +  R  +        G E E  +
Sbjct: 7   GPPGSGKSTQARRITER-----------YGLTYISSGDIIRAEI--SSRTPLGLEMEKYL 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
              +R D + + I        +++   R +  ++   G   +     +     +    + 
Sbjct: 54  ---SRGDLIPDTIV-----NTLIISKLRRVRENFIMDGYPRT-PEQVIALENYLYDHGIK 104

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFERKDV--M 168
            D  I + +  +  ++R+  R    +   +                   D  +R D    
Sbjct: 105 IDVAIDIFITKEESVRRISGRRICSKCGAVYHIEFNPPKIPGKCDICGGDLIQRPDDRPE 164

Query: 169 IHEKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208
           I EKR  I++           +      +D   S   V   I  ++
Sbjct: 165 IVEKRYDIYMRNMEPIIKFYQKQGIYVKIDGHGSINEVWERIRPLL 210


>gi|71667254|ref|XP_820578.1| adenylate kinase [Trypanosoma cruzi strain CL Brener]
 gi|70885928|gb|EAN98727.1| adenylate kinase, putative [Trypanosoma cruzi]
          Length = 260

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 57/233 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T    +          V          + +  R  +      E G  A
Sbjct: 52  IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E  +     +    V N +R  L +  +     L D F  S                D  
Sbjct: 99  ETFIHNGEMVPNKIVINAVRKRLEQDDVKERGWLLDGFPRS---------------RDQA 143

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYFER 164
           + +    ++P   ++L++P  I ++R++NR +   +  +                +   +
Sbjct: 144 EALESSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERLIQ 203

Query: 165 KDVMIHEKRRQ---IFLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWE 210
           +D    E       I+ +      +        ++   S  +V   +L +V  
Sbjct: 204 RDDDHRETVEARLRIYHEKLHGLKEHYGTLVETINGDQSIHAVTEGVLAVVER 256


>gi|319940527|ref|ZP_08014871.1| hypothetical protein HMPREF9464_00090 [Sutterella wadsworthensis
           3_1_45B]
 gi|319806055|gb|EFW02809.1| hypothetical protein HMPREF9464_00090 [Sutterella wadsworthensis
           3_1_45B]
          Length = 570

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 28/134 (20%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  G GK+T + +L       +  L  +     + ++P   P  E    +      +   
Sbjct: 397 GPSGIGKSTLLKVLSGFAGNYEGKLSERGSIFWMPQQP-YLPKGELIAALTYPQSPETIT 455

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +A   + +AA LDH++  +      G             A     +  +   L +L   
Sbjct: 456 EQAAQELLSAAHLDHLKEKL---YDSGDW----------SALLSGGEQQRLSLLRAL--- 499

Query: 124 SVQEVMPDCTIILD 137
               V PD  ++LD
Sbjct: 500 ---IVKPDI-LLLD 509


>gi|218440642|ref|YP_002378971.1| adenylate kinase [Cyanothece sp. PCC 7424]
 gi|218173370|gb|ACK72103.1| adenylate kinase [Cyanothece sp. PCC 7424]
          Length = 187

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 76/216 (35%), Gaps = 39/216 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55
           M   + + F G  G+GK T   +L + LQ        T         +  R  +     L
Sbjct: 1   MTKPIGLIFLGPPGSGKGTQAQVLSQSLQ---IPHIST--------GDILRQAITDSTPL 49

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                 +  + E +            + +P   +G  +L D F          R  +Q  
Sbjct: 50  GIKAQSYMDKGELVPDDLLLDLIKNRLSQPDAQQG-WIL-DGF---------PRTVAQAC 98

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--- 172
           FL++L  ++  ++  +C + L++P D+ ++R+  R    +        R+  + HE+   
Sbjct: 99  FLENL--LAQLDLFSECVVNLEVPEDVLIERLLGRGRQDDHETTIR--RRLQVYHEQTAP 154

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
               +             ++     + V+ ++  I+
Sbjct: 155 VIDYYRQRGNLNS-----LNGNRPPEQVSHSLKEII 185


>gi|169335418|ref|ZP_02862611.1| hypothetical protein ANASTE_01830 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258156|gb|EDS72122.1| hypothetical protein ANASTE_01830 [Anaerofustis stercorihominis DSM
           17244]
          Length = 182

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 25/176 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G      G  G+GK+T    L++  +     +  T  P      E   +  LS    + 
Sbjct: 2   RGKLFVISGPSGSGKSTICKELEKE-ENIKISISATTRPMRKGEEEGVNYYFLSNEEFQK 60

Query: 63  GAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             + +A    A+  +H    ++  +   L  G  ++ +  +D   A Q +R + + + + 
Sbjct: 61  RIKKKAFYEFASVFNHYYGTLKEKVDEMLDGGYNVILE--IDVQGAMQIKRQNDKAILI- 117

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEK 172
                    +MP          +  ++R+ NR +  +          +++++   K
Sbjct: 118 --------FIMPP-------SEEELIERLTNRKTESDEQLKLRIATAKEEILFKNK 158


>gi|50745115|ref|XP_419990.1| PREDICTED: similar to XPA binding protein 1 [Gallus gallus]
          Length = 369

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 18  GMAGSGKTTFVQCLAAHLHGQRCPPYVINLDPAVHELPFPANIDIRDTVKYKEVMKQYGL 77

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I       K ++ D
Sbjct: 78  GPNGGIVTSLNLFATRFDQVMKFIEKRQNASKYVIID 114


>gi|163937882|ref|YP_001642768.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4]
 gi|163865737|gb|ABY46793.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4]
          Length = 215

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 47/160 (29%), Gaps = 23/160 (14%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
             +G+ G GKTT   +L++ L     D+ +  E G                   +G   +
Sbjct: 9   VIDGVVGCGKTTLAKILEKEL-----DMPLYEEIGSQDTINLLDRFY--AKRTRWGFTLQ 61

Query: 68  AIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFLDS--- 119
                          I+     G     + +  DR      A   E       + +    
Sbjct: 62  IHFLNTRFRQ-----IKDIHANGGGMLDRSIFGDRLFAEMMAEDLEDGGEGMTWEEFRTY 116

Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
              L  +    + P   + L+  VD  + R+  R    ES
Sbjct: 117 STLLDSMLEHSIPPTLLVYLECDVDTAIGRISKRDRGLES 156


>gi|229527114|ref|ZP_04416508.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           12129(1)]
 gi|229335345|gb|EEO00828.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           12129(1)]
          Length = 344

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 200 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 256 TGADSASVIYDAIEAAKARGIDVVIAD 282


>gi|238021574|ref|ZP_04602000.1| hypothetical protein GCWU000324_01474 [Kingella oralis ATCC 51147]
 gi|237866188|gb|EEP67230.1| hypothetical protein GCWU000324_01474 [Kingella oralis ATCC 51147]
          Length = 542

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L   G 
Sbjct: 349 GINGAGKTTSIGKLAKYFQAQGKSVILA---AGDTFRAAAREQLQEWGE 394


>gi|169642562|gb|AAI60767.1| Deoxyribonucleoside kinase-like [Xenopus laevis]
          Length = 278

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 36/214 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63
           I  EG   +GKT+ +        L+     V   R   G  P       +          
Sbjct: 73  ICVEGNIASGKTSCLDYFSNTPDLEVFKEPVAKWRNVCGHNPLGL----MYQDPNKWGLT 128

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY------AYQ-GERDSSQHLF 116
            +    +       H +  I P      + + +R + S+        YQ G+  +  +  
Sbjct: 129 LQTYVQLTMLD--IHTKPSISP------VKMMERSIYSAKYIFVENLYQSGKMPAVDYAI 180

Query: 117 L-DSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           L +  + I    +   D  + L    +I  +R++ R    ES          +       
Sbjct: 181 LTEWFKWIVKNTDTSVDLIVYLQTSPEICYQRLKKRCREEESVIP-------LEYLCAIH 233

Query: 175 QIFLD-IARNQ----PDRCHIVDSAHSFQSVATN 203
            ++ D + +      P    ++D     + +  +
Sbjct: 234 NLYEDWLVKQTSFSVPAPVLVIDGNKELEELTQH 267


>gi|147901640|ref|NP_001082184.1| thymidine kinase 2, mitochondrial [Xenopus laevis]
 gi|18026944|gb|AAL55705.1|AF250861_1 putative deoxyribonucleoside kinase [Xenopus laevis]
          Length = 278

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 36/214 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63
           I  EG   +GKT+ +        L+     V   R   G  P       +          
Sbjct: 73  ICVEGNIASGKTSCLDYFSNTPDLEVFKEPVAKWRNVCGHNPLGL----MYQDPNKWGLT 128

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY------AYQ-GERDSSQHLF 116
            +    +       H +  I P      + + +R + S+        YQ G+  +  +  
Sbjct: 129 LQTYVQLTMLD--IHTKPSISP------VKMMERSIYSAKYIFVENLYQSGKMPAVDYAI 180

Query: 117 L-DSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           L +  + I    +   D  + L    +I  +R++ R    ES          +       
Sbjct: 181 LTEWFKWIVKNTDTSVDLIVYLQTSPEICYQRLKKRCREEESVIP-------LEYLCAIH 233

Query: 175 QIFLD-IARNQ----PDRCHIVDSAHSFQSVATN 203
            ++ D + +      P    ++D     + +  +
Sbjct: 234 NLYEDWLVKQTSFSVPAPVLVIDGNKELEELTQH 267


>gi|67528044|ref|XP_661862.1| hypothetical protein AN4258.2 [Aspergillus nidulans FGSC A4]
 gi|40739736|gb|EAA58926.1| hypothetical protein AN4258.2 [Aspergillus nidulans FGSC A4]
 gi|259481128|tpe|CBF74375.1| TPA: uridylate kinase Ura6 (AFU_orthologue; AFUA_7G03990)
           [Aspergillus nidulans FGSC A4]
          Length = 215

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 53/216 (24%)

Query: 11  GIEGAGKTTHISLLK-----------RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           G  G+GK T  + L              L+ +            +      ++ +    +
Sbjct: 22  GGPGSGKGTQSANLVRDYGFVHLSAGDLLRAEQIR-------PESEYGALIKNYITEGKI 74

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                   A++  A   +   N  + A  +       RFL       G            
Sbjct: 75  VPM-EITVALLSNAMAAELDANKDKYASAKP------RFLID-----GFPRKLDQAVF-- 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +E        + T+ LD P ++  KR+  R              +D    E  R+ F  
Sbjct: 121 FEETVCPS---EFTLFLDCPEEVMEKRLLKRGETSG---------RDDDNAESIRKRFRT 168

Query: 180 IAR---------NQPDRCHIVDSAHSFQSVATNILN 206
                        + D+   V +  + + V   I  
Sbjct: 169 FVETSMPVVTEFEKQDKVISVAATGTVEEVYERIQA 204


>gi|260771642|ref|ZP_05880562.1| signal recognition particle receptor protein FtsY [Vibrio
           metschnikovii CIP 69.14]
 gi|260613419|gb|EEX38618.1| signal recognition particle receptor protein FtsY [Vibrio
           metschnikovii CIP 69.14]
          Length = 388

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 191 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNHVPVIAQH-- 246

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 247 TGADSASVIYDAIEAAKARGIDVVIAD 273


>gi|256390278|ref|YP_003111842.1| phosphotransferase (aminonucleoside antibiotic resistance)
           [Catenulispora acidiphila DSM 44928]
 gi|256356504|gb|ACU70001.1| phosphotransferase (aminonucleoside antibiotic resistance)
           [Catenulispora acidiphila DSM 44928]
          Length = 192

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 35/164 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63
             I   GI  +GK+T  ++L +    +   V            +  R +++S  VD    
Sbjct: 3   RLIVVTGIPASGKSTVAAVLAQRC-ARGVIV----------DGDTIRAMVVSGCVDMSRE 51

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AEA+     R      V    L  G  ++               D+     LD L   
Sbjct: 52  PSAEALWQLRLRYQASLAVAGVYLQAGFDVV-------------FNDNVLGPLLDEL--- 95

Query: 124 SVQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
               ++P       + L+   ++   R + R     +A    F+
Sbjct: 96  --PGLVPCDRFHLVV-LNPSPEVIRDRDRQRAKTAYTAENGKFD 136


>gi|290893964|ref|ZP_06556940.1| dephospho-CoA kinase [Listeria monocytogenes FSL J2-071]
 gi|290556502|gb|EFD90040.1| dephospho-CoA kinase [Listeria monocytogenes FSL J2-071]
          Length = 200

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 77/216 (35%), Gaps = 32/216 (14%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60
           G+ G+   GK+T  +++++    L   +       EPG     E        +LL+ G  
Sbjct: 6   GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVEPGTEGLKEIVAYFGEEILLADGTL 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I     + + +  +  P + +  +   +RF  +    +        LF   L
Sbjct: 66  NRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFRAGE--ELVFFDIPLLFESHL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179
           + +  Q V     +      +  LKR+  R +L +   L   E + + I EK R+  F  
Sbjct: 124 ESLVDQIV----VVW--TTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                     ++D+  S +     +   +   V+ +
Sbjct: 175 ----------VIDNNESLEKTQKQVYTFIERFVKNK 200


>gi|3184188|dbj|BAA28693.1| UMP-CMP kinase [Lentinula edodes]
          Length = 227

 Score = 40.0 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 43/218 (19%)

Query: 11  GIEGAGKTTHISLLKR-----------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           G  GAGK T  + L              L+ + +     RE  G+   +  +  +    +
Sbjct: 32  GGPGAGKGTQCARLVEDFSFSHLSAGDLLRAEQH-----RE--GSEYGQLIQTCIKEGSI 84

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                    ++  A      E        +G+     RFL   +             +D 
Sbjct: 85  VPM-EVTVKLLENAMTATLAERRSGEGWTDGQG----RFLIDGF----------PRKMDQ 129

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RR 174
            ++           +      ++ L R+  R   S RE   ++  +++     E+     
Sbjct: 130 AEKFEHDVGKATAVLFFSTTQEVMLDRLLERGKTSGREDDNVESIKKRFNTYKEQTMPVI 189

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + +  +      +   +DS+ S + V     + V +L+
Sbjct: 190 EHYEKL-----GKVIEIDSSVSIEEVHQKTRSAVAKLL 222


>gi|298369773|ref|ZP_06981090.1| signal recognition particle-docking protein FtsY [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282330|gb|EFI23818.1| signal recognition particle-docking protein FtsY [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 410

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 217 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 271

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 272 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 322

Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159
            MPD      ++LD   +IG   V    +  E+  L
Sbjct: 323 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 356


>gi|294054376|ref|YP_003548034.1| adenylylsulfate kinase [Coraliomargarita akajimensis DSM 45221]
 gi|293613709|gb|ADE53864.1| adenylylsulfate kinase [Coraliomargarita akajimensis DSM 45221]
          Length = 205

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 40/206 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L+R L  +     VT+              +L       G  ++   
Sbjct: 35  GLSGSGKSTLANALERKLVEQG---IVTK--------------ILDGDNIRSGLNSDLGF 77

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ-EVM 129
               R +++  +   A +         FLDS         + +       +EI    +  
Sbjct: 78  SDEDRKENIRRIAEVARL---------FLDSGVVVFTSFITPKRELRQQAREIVGDVDFT 128

Query: 130 PDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
           P   + ++   +   +R V+  Y+   +  + +F  KD              A    D  
Sbjct: 129 P---VYVEASFETCAERDVKGLYAKAAAGGVKHFTGKDSSF--------EAPAEGDTDWV 177

Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214
              D   + +     +L  V  L+++
Sbjct: 178 IHTD-NQTEEESLNQLLEQVLPLIRQ 202


>gi|225551732|ref|ZP_03772675.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia sp. SV1]
 gi|225371527|gb|EEH00954.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia sp. SV1]
          Length = 347

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          FI+  G  G GKTT I +L  FL +KN +++   
Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLNQKNGEIYFFS 68


>gi|171915234|ref|ZP_02930704.1| guanylate kinase [Verrucomicrobium spinosum DSM 4136]
          Length = 205

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 27/198 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ +   G  G+GKTT    +    +  +     TR+P                  +E  
Sbjct: 13  GVLLIVSGPSGSGKTTLCRQIADLGEAVHSVSATTRKPRPGEMHGKDYFFFSEEEFEEKI 72

Query: 64  AEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           A  E    A    +    ++  ++  L  G  ++ D             D      + + 
Sbjct: 73  ARGEFFEHARVHGNLYGTLKTYVKENLERGVDVVMD------------IDVQGATLVRAC 120

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            +  VQ+ + D   IL   VD   +R+  R +  +         + + +  + R    +I
Sbjct: 121 DDELVQQCLAD-VFILPASVDALKERLAGRGTEDD---------ESLEL--RLRNALTEI 168

Query: 181 ARNQPDRCHIVDSAHSFQ 198
           A     R  +V  +    
Sbjct: 169 AHWHKYRYALVSGSREAD 186


>gi|134287211|ref|YP_001110907.1| thymidine kinase [Heliothis virescens ascovirus 3e]
 gi|133722119|gb|ABO37241.1| thymidine kinase [Heliothis virescens ascovirus 3e]
          Length = 217

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 62/219 (28%), Gaps = 33/219 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           ++S EG  G+GK++ +  + +        +    EP            LL          
Sbjct: 12  YVSVEGNIGSGKSSVMRSVAKHFDD---CILFCEEPVNDWG-------LL--EYMYRDPT 59

Query: 66  AEAIVFAAARLDHVENVIRPALME-----GKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             A  F    L    +    AL E      +I++ +R   S+Y         +       
Sbjct: 60  KYAFAFEVQVLTSKYHKWINALDECRRTQKRIVVMERSPLSAYKVFTRMMRERGTISSHQ 119

Query: 121 QEISVQ---EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             I  Q   E  P     D  + +D        R   R    E       E   +     
Sbjct: 120 YHIYTQIFAEFQPQLKSIDHIVHIDTRASTCQVRAGERNRKAE-------EALSLEYLLD 172

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             + + +         + +D   S + VA  +   +  L
Sbjct: 173 V-ESYTNNYVRDHSSVYTIDGDRSREHVAGELTAFLSSL 210


>gi|67923512|ref|ZP_00516987.1| Carbohydrate kinase, thermoresistant glucokinase [Crocosphaera
           watsonii WH 8501]
 gi|67854654|gb|EAM49938.1| Carbohydrate kinase, thermoresistant glucokinase [Crocosphaera
           watsonii WH 8501]
          Length = 169

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 52/214 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT    L +      YD      P      + ++ + L+         A  +V
Sbjct: 7   GVSGSGKTTIGQALSQEFGCAFYDADDFHPPEN--ITKMSQGIPLNDSDRLPWLNAIKLV 64

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                  H E        +  ++ C               + +  + D L+E +   +  
Sbjct: 65  IN----QHQEE------NKNAVITC--------------SALKQSYRDLLEENTTDIIW- 99

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
              I L    +  L R+Q R          +F +++++I +     F  +   +P+   I
Sbjct: 100 ---IYLKGNHETILNRLQQRSK--------HFMKENMLISQ-----FKTL--EEPENAVI 141

Query: 191 VDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           +D   S + +   I       +++  + + S KD
Sbjct: 142 IDVNLSVKEILQEI-------IEQTYAKIESNKD 168


>gi|325286564|ref|YP_004262354.1| Guanylate kinase [Cellulophaga lytica DSM 7489]
 gi|324322018|gb|ADY29483.1| Guanylate kinase [Cellulophaga lytica DSM 7489]
          Length = 197

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 8/103 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS 56
           M  G  I F    G+GKTT +  L  K+ L    + V  T  P  G     E    + LS
Sbjct: 1   MKGGKLIIFSAPSGSGKTTIVRHLLGKKHLNLA-FSVSATSRPKRGKEKNGEHYYFLSLS 59

Query: 57  ---CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                +          V+       ++  +     EGK ++ D
Sbjct: 60  EFKNHIKNDDFLEWEEVYRDNFYGTLKTEVERLWAEGKNVIFD 102


>gi|225011856|ref|ZP_03702294.1| conserved hypothetical protein [Flavobacteria bacterium MS024-2A]
 gi|225004359|gb|EEG42331.1| conserved hypothetical protein [Flavobacteria bacterium MS024-2A]
          Length = 184

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 18/133 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+ I +    L    Y+V    E       E  +               
Sbjct: 6   IVISGSPGAGKTSVIEV----LSANGYNV---FEEFSRTIIEEGKA--KGKANFFLSDPH 56

Query: 67  EAI--VFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           E    +F   R +  E      +   K  +  DR +  +YAY      +   +    +E+
Sbjct: 57  EFSERLFL-GRKEQFETANTLKVEPTKPYVFFDRGIHDTYAYLNALGEASTYW----EEL 111

Query: 124 SVQEVMPDCTIIL 136
                  D   +L
Sbjct: 112 V-GAFKYDLVFLL 123


>gi|167461882|ref|ZP_02326971.1| ABC-type MDR transport system, ATPase component [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383307|ref|ZP_08057107.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321152427|gb|EFX45226.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 315

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 70/219 (31%), Gaps = 34/219 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--- 59
            G  + F G  GAGKTT I++L   L      +H   EP     +   R + +       
Sbjct: 32  QGEILCFLGPNGAGKTTTINILSTTLHGDQGKIHYCGEPVNRHTSRYKRELGIIPQDLAV 91

Query: 60  -DEFGAEAEAIVFAAARLDHVENVIRPALMEGK------ILLCDRFLDSSYAYQGERDSS 112
            ++  AEA    FA+     +  +    L +G       + L DR  D    + G     
Sbjct: 92  YEDISAEANVRFFAS-----LYGLKGKELEQGTNDALEFVGLADRRKDKPKTFSGGMK-- 144

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                  L         P   II+D    +G   +  +        +     +   I   
Sbjct: 145 -----RRLNMACAIAHRPKL-IIMD-EPTVG---IDPQSRNHILGSIRRLRDEGATIIYT 194

Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILN 206
               +++       R  I+D     ++ + + +   + +
Sbjct: 195 TH--YMEEVEEISTRILIIDHGEVIASGTKEELKERLAD 231


>gi|91227501|ref|ZP_01261838.1| cell division protein FtsY [Vibrio alginolyticus 12G01]
 gi|91188525|gb|EAS74817.1| cell division protein FtsY [Vibrio alginolyticus 12G01]
          Length = 403

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 203 GVNGVGKTTTIGKLAKQFQTQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 258

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I  A   G  +++ D            R  ++   ++ L++I 
Sbjct: 259 TGADSASVIYDAIEAAKARGVDVVIAD---------TAGRLQNKANLMEELRKIV 304


>gi|319783341|ref|YP_004142817.1| adenylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169229|gb|ADV12767.1| adenylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 198

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 67/217 (30%), Gaps = 41/217 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA---- 66
           G  GAGK T    L     +       T         +  R  + +       A+A    
Sbjct: 7   GPPGAGKGTQAQRLVE---KHGIPQLST--------GDMLRAAVQAGTEVGKRAKAVMDA 55

Query: 67  -EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E +  A       E + +P   +G   + D +          R   Q   ++ +     
Sbjct: 56  GELVSDAIVNAIVAERIDQPDCAKGF--ILDGY---------PRTLVQADAVEQMLSDRS 104

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLD----- 179
           Q +  D  I L +     + R+  R    ++A L    +    +  E+ R+ +       
Sbjct: 105 QGL--DAVIELVVDDKALVGRIVKRADEAQAAGLPVRKDDNPTVFEERLREYYKKTSPLI 162

Query: 180 ---IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
               A+    +   VD      +V   I  ++ + V+
Sbjct: 163 GYYYAK---GKLRSVDGMADIDAVTEQIEAVLKDAVR 196


>gi|304440684|ref|ZP_07400568.1| guanylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304370871|gb|EFM24493.1| guanylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 210

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 56/177 (31%), Gaps = 28/177 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G  +   G  G+GK T  + L +  +   +     TR P            +     
Sbjct: 1   MSKGFLMVLSGPSGSGKGTVSAALMKKNKEIVFSTSVTTRTPRPGEVNGENYFFVSVDEF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +        + +A    ++    +  +   + +G+I+L +  +D   A Q ++   +   
Sbjct: 61  ENMVQNDGLLEYAFVHTNYYGTPKEFVFNEIEKGEIVLLE--IDVQGALQIKKRYKEA-- 116

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER--KDVMI 169
                             I  LP       +R+ NR +  E      F    K++  
Sbjct: 117 ----------------VFIFLLPPSMSELKQRLINRDTETEEEINTRFSNAYKELDF 157


>gi|296224230|ref|XP_002757971.1| PREDICTED: GPN-loop GTPase 1-like [Callithrix jacchus]
          Length = 423

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  +            VH    P      +    + V+   G+
Sbjct: 75  GMAGSGKTTFVQRLTGHLHTEGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 134

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    K +L D
Sbjct: 135 GPNGGIVTSLNLFATRFDQVMQFIEKAQNVSKYVLID 171


>gi|288556071|ref|YP_003428006.1| cytidylate kinase [Bacillus pseudofirmus OF4]
 gi|288547231|gb|ADC51114.1| cytidylate kinase [Bacillus pseudofirmus OF4]
          Length = 224

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          MN+ + I+ +G  GAGK+T   L+   L     D
Sbjct: 1  MNNLMNIAIDGPAGAGKSTVAKLVAERLSYLYID 34


>gi|258515532|ref|YP_003191754.1| guanylate kinase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779237|gb|ACV63131.1| guanylate kinase [Desulfotomaculum acetoxidans DSM 771]
          Length = 198

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 28/168 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL +   G  GAGK T    L +  Q     V   TR+P      +   +   +    E
Sbjct: 4   KGLLLVISGPSGAGKGTVCQALLKKKQNMYLSVSATTRQPRSGEI-QGVNYWFKTKEEFE 62

Query: 62  FGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                +  +  A   D+        +  AL  GK ++ +  +D   A Q           
Sbjct: 63  HLLVEDQFLEYARVYDNYYGTPRLEVEKALETGKDVILE--IDIQGALQ----------- 109

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                  V+E MP+  ++  +P    L  ++ R   R +      E++
Sbjct: 110 -------VKEKMPNSVLVFIVPP--SLTELKTRLVNRGTDSAAEIEKR 148


>gi|227511562|ref|ZP_03941611.1| multidrug ABC superfamily ATP binding cassette transporter, ABC
           protein [Lactobacillus buchneri ATCC 11577]
 gi|227523761|ref|ZP_03953810.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227085207|gb|EEI20519.1| multidrug ABC superfamily ATP binding cassette transporter, ABC
           protein [Lactobacillus buchneri ATCC 11577]
 gi|227089076|gb|EEI24388.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 295

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  GAGKTT ++L++  L   N+ +  +  +PG T   E    +             E I
Sbjct: 37  GPNGAGKTTLLNLIQGILSSHNHAITVLDSQPGSTIVKEKVATMFQDDLQINNVKVNEFI 96

Query: 70  VFAAARLDHVEN 81
              AA+  H +N
Sbjct: 97  KLFAAQATHPKN 108


>gi|55959197|emb|CAI15067.1| guanylate kinase 1 [Homo sapiens]
          Length = 199

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 35/221 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+    +   G  GAGK+T   LLKR LQ             G   +  +R ++     +
Sbjct: 1   MSGPRPVVLSGPSGAGKST---LLKRLLQEH-------SGIFGFSVSRESRALVEGYHEE 50

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS- 119
                 E       R     + I  A   G +     +  S  A Q  +  ++   LD  
Sbjct: 51  PEARRGERQREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRICVLDVD 105

Query: 120 ---LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              ++ I   ++ P   I + +      +  +R++ R +  E + +         +    
Sbjct: 106 LQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQADME--- 159

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                  +  +P    +V    S       +   + E ++K
Sbjct: 160 -------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 193


>gi|124027273|ref|YP_001012593.1| ABC transporter ATP-binding protein [Hyperthermus butylicus DSM
          5456]
 gi|123977967|gb|ABM80248.1| ABC (ATP-binding cassette) transporter domain [Hyperthermus
          butylicus DSM 5456]
          Length = 230

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F+   G  G+GKTT + ++   L+    +V++
Sbjct: 31 GKFVVIVGPNGSGKTTLLKIIVGLLEPAKGEVYI 64


>gi|118593263|ref|ZP_01550648.1| ABC transporter related protein [Stappia aggregata IAM 12614]
 gi|118434154|gb|EAV40810.1| ABC transporter related protein [Stappia aggregata IAM 12614]
          Length = 280

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHV-LLSCGVDE 61
           G  I+F G  G+GK+T + +++   +     V    R  G     + AR V +LS   D 
Sbjct: 31  GRIIAFCGPNGSGKSTALKVMRGLHRPDGGTVEIAGRMLGDWTQKDLARQVAMLSQSPDA 90

Query: 62  FGAEAEAIVFAAARLDH 78
               +   +    R  H
Sbjct: 91  PSDLSVGDLVLMGRFAH 107


>gi|56693115|ref|YP_164702.1| hypothetical protein LP65_gp067 [Lactobacillus phage LP65]
 gi|54633616|gb|AAV35887.1| orf67 [Lactobacillus phage LP65]
          Length = 246

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 60/242 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G+ G+GK+T  +LL   L     +V+                 L       +  
Sbjct: 1   MVITLSGVIGSGKSTLATLLGDQL---GTNVYYESVEDNPML------PLFYKDPQRYSF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY------QGERDSSQHLF 116
           E +   F + RLD     I  AL E   +L DR  + DS + +      +          
Sbjct: 52  ELQIY-FLSKRLDS----IMSALEENNSVL-DRSIYEDSLFFHTNAKLGRVAGGVEDSKV 105

Query: 117 L----DSLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
           L    D L E  ++++       PD  I + +  +  + R+  R    E    D      
Sbjct: 106 LVNIYDDLLEHMLRKIHGMPKMAPDLMIGIHVSYETMVNRISKRGRPYEQVQND------ 159

Query: 167 VMIHEKRRQIFLDIARNQPD---------RCHIVDSAH--------SFQSVATNILNIVW 209
                  +  + ++ +               +++D             + V  +IL+ + 
Sbjct: 160 ----AGLKSYYKELLKAYDKFFNGGYNESPIYVIDGDKYDFVGNKHDREIVMGDILDTLE 215

Query: 210 EL 211
            L
Sbjct: 216 SL 217


>gi|312880744|ref|ZP_07740544.1| protein of unknown function DUF344 [Aminomonas paucivorans DSM
           12260]
 gi|310784035|gb|EFQ24433.1| protein of unknown function DUF344 [Aminomonas paucivorans DSM
           12260]
          Length = 492

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           ++FEG + AGK   I  L + L  + Y V  T  P     A
Sbjct: 298 VAFEGPDAAGKGGCIKRLTQELDPRGYQVVPTSAPNDWERA 338



 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          + FEG +GAGK T ++ L   L  + + VH    P 
Sbjct: 43 VVFEGWDGAGKGTLMNELILALDPRGFQVHNVGGPT 78


>gi|289597034|ref|YP_003483730.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469]
 gi|289534821|gb|ADD09168.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469]
          Length = 316

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----HVTREP--GGTPAAEAAR 51
            G  I F G  G GK+T I  +   L      V       R P  GG+   +  R
Sbjct: 46  KGRIICFTGPPGVGKSTLIDHVISILTEGGKKVGVILVDPRSPYTGGSLLGDRIR 100


>gi|255065474|ref|ZP_05317329.1| signal recognition particle-docking protein FtsY [Neisseria sicca
           ATCC 29256]
 gi|255050299|gb|EET45763.1| signal recognition particle-docking protein FtsY [Neisseria sicca
           ATCC 29256]
          Length = 480

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 287 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 341

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 342 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 392

Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159
            MPD      ++LD   +IG   V    +  E+  L
Sbjct: 393 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 426


>gi|2773023|gb|AAC08906.1| regulatory protein PilA [Neisseria meningitidis]
          Length = 144

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q     V +     G     AAR  L + G  E         
Sbjct: 22  GINGAGKTTSIGKLAKYFQAHGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 76

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 77  TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 127

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 128 AMPDAPHEIIVVLD 141


>gi|33303843|gb|AAQ02435.1| guanylate kinase 1 [synthetic construct]
 gi|54696768|gb|AAV38756.1| guanylate kinase 1 [synthetic construct]
 gi|54696770|gb|AAV38757.1| guanylate kinase 1 [synthetic construct]
 gi|61366518|gb|AAX42870.1| guanylate kinase 1 [synthetic construct]
 gi|61366526|gb|AAX42871.1| guanylate kinase 1 [synthetic construct]
          Length = 198

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 47/226 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 1   MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 44

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G +              R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 45  -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +         
Sbjct: 99  VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 155

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +           +  +P    +V    S       +   + E ++K
Sbjct: 156 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 191


>gi|323360052|ref|YP_004226448.1| peptide arylation enzyme [Microbacterium testaceum StLB037]
 gi|323276423|dbj|BAJ76568.1| peptide arylation enzyme [Microbacterium testaceum StLB037]
          Length = 559

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF--QSVATNILNIVWELVQ 213
           +   D +  + +         F   A   P+R  +V+   S     V   +      L++
Sbjct: 12  TEVADRYRAEGLWQGRTLGDAFAAAASRHPERIALVNGDLSLTYAEVHDRVEACAARLIE 71

Query: 214 KRVSP 218
           + ++P
Sbjct: 72  RGLAP 76


>gi|294677384|ref|YP_003577999.1| guanylate kinase [Rhodobacter capsulatus SB 1003]
 gi|294476204|gb|ADE85592.1| guanylate kinase [Rhodobacter capsulatus SB 1003]
          Length = 214

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 18/106 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I      GAGK+T    L  +    ++ V   TR P   P  E  R         
Sbjct: 6   RRGLLIILSSPSGAGKSTLARRLMAWDASLSFSVSATTRNP--RPGEEDGREYYFRSR-- 61

Query: 61  EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCD 96
               E EA+V A   L+H E            +   L EG+ ++ D
Sbjct: 62  ---PEFEAMVAAGEMLEHAEVFGNLYGTPSAPVEARLAEGRDVILD 104


>gi|242277657|ref|YP_002989786.1| cytidylate kinase [Desulfovibrio salexigens DSM 2638]
 gi|259494035|sp|C6BVN3|KCY_DESAD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|242120551|gb|ACS78247.1| cytidylate kinase [Desulfovibrio salexigens DSM 2638]
          Length = 223

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 16/48 (33%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48
          M++   I+ +G  G GK+T    L    +    D             E
Sbjct: 1  MDTPFIITLDGPAGVGKSTLAKRLADRFEIAYLDTGAMFRGTAWKLGE 48


>gi|121610088|ref|YP_997895.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121554728|gb|ABM58877.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 266

 Score = 40.0 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 26/198 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---REPGGTPAAEAARHVLLSCGVDEF 62
           FIS  G  G GK+T + L+    +     +H +   + P G       +   L      F
Sbjct: 42  FISLLGPSGCGKSTALRLMAGLARSSGGTMHWSGAEQTPSGRELGFVFQEPTLMPWAKVF 101

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 +  A  R D    V+R AL    ++   RF D    Y  E      + +   + 
Sbjct: 102 DNVRLPLKLAGMRRDAAAPVVRQALE---MVGLSRFAD---VYPRELSGGMKMRVSIARA 155

Query: 123 ISVQEVMPDCTIILDLPVDIG--LKRVQNRYSLRESACLDYFERKDVMI--HEKRRQIFL 178
           +      P   +++D P      + R++    L        F    V+   H     ++L
Sbjct: 156 LVT---RPRL-LLMDEPFAALDEMTRIKLNNDLLAIWREHRF---SVVFVTHSVYESVYL 208

Query: 179 D----IARNQPDRCHIVD 192
                +   +P R  ++D
Sbjct: 209 SNRIVVMAARPGR--VID 224


>gi|326387140|ref|ZP_08208750.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208321|gb|EGD59128.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 657

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 38/143 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L+++                           LL       G   + 
Sbjct: 488 FTGLSGSGKSTIANLVEKKFHALGKHTF-----------------LLDGDNVRHGLNKDL 530

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QEI 123
               A R++++     V +     G I++         A+     + + +    L   E 
Sbjct: 531 GFTEADRIENIRRVGEVAKLMTDAGLIVIT--------AFISPFRAEREMVRAMLPEGEF 582

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
                     + +D P++   +R
Sbjct: 583 VE--------VFIDTPLEEAERR 597


>gi|317180388|dbj|BAJ58174.1| adenylate kinase [Helicobacter pylori F32]
          Length = 191

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   + +I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKRIILIDGYPRSVEQMQALDKELGTQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V +     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189


>gi|239993200|ref|ZP_04713724.1| adenylylsulfate kinase [Alteromonas macleodii ATCC 27126]
          Length = 198

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 52/148 (35%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +LL++ L  +N   +                 LL       G   +   
Sbjct: 33  GLSGSGKSTLANLLEKKLHEQNKHTY-----------------LLDGDNVRHGLCGDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILL--------CDR-FLDSSYAYQGERDSSQHLFLD 118
               R++++     V +  +  G I+L         DR +  S              F++
Sbjct: 76  SDKDRVENIRRISEVAKLFVDAGTIVLTAFISPFKADRDYCRSLM--------EDGEFVE 127

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
                          + +D P+++  KR
Sbjct: 128 ---------------VFIDTPLEVCEKR 140


>gi|310658923|ref|YP_003936644.1| hypothetical protein CLOST_1619 [Clostridium sticklandii DSM 519]
 gi|308825701|emb|CBH21739.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 492

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            + FEG + +GK T I+ L + L  + Y V V  E       E  R   L     +   +
Sbjct: 42  LVIFEGWDASGKGTLINELIQELDPRGYKVEVFHESTE----EEKRKPFLWRFWQKIPRK 97

Query: 66  AEAIVF 71
            E ++F
Sbjct: 98  GEIMIF 103


>gi|195564678|ref|XP_002105941.1| GD16579 [Drosophila simulans]
 gi|194203306|gb|EDX16882.1| GD16579 [Drosophila simulans]
          Length = 299

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          +   G+  +GK+T    L+     +   VH+  E    P A   ++            + 
Sbjct: 4  VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN-----SHTGDSQKE 58

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96
          + +     R D      R  L +  +++ D
Sbjct: 59 KVV-----RSDLKSEASRH-LNQDDLVILD 82


>gi|195347775|ref|XP_002040427.1| GM19183 [Drosophila sechellia]
 gi|194121855|gb|EDW43898.1| GM19183 [Drosophila sechellia]
          Length = 299

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 11/90 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          +   G+  +GK+T    L+     +   VH+  E    P A   ++            + 
Sbjct: 4  VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN-----SHTGDSQKE 58

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96
          + +     R D      R  L +  +++ D
Sbjct: 59 KVV-----RSDLKSEASRH-LNQDDLVILD 82


>gi|111024091|ref|YP_707063.1| shikimate kinase [Rhodococcus jostii RHA1]
 gi|123045355|sp|Q0S0N1|AROK_RHOSR RecName: Full=Shikimate kinase; Short=SK
 gi|110823621|gb|ABG98905.1| shikimate kinase [Rhodococcus jostii RHA1]
          Length = 168

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 64/200 (32%), Gaps = 40/200 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T    L + L    +D  V  E     A      + +  G   F A  E   
Sbjct: 9   GPPGAGKSTIGRRLAQALDLPLFDTDVAVE---EEAGRTIAEIFVQEGEPAFRALEE--- 62

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                      ++R A+   + ++            G          + L+  +      
Sbjct: 63  ----------EIVRKAIESHEGIVS----------LGGGSILSERTRELLKGHT------ 96

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
              I L++ V  GLKR     +    A  D   +K   +  KRR ++  +A     R   
Sbjct: 97  --VIYLEISVAEGLKRTGTNTARPLLAGGDP-RQKYTELMRKRRPLYRQVASI---RIRT 150

Query: 191 VDSAHSFQSVATNILNIVWE 210
            D   S   V   ++  + E
Sbjct: 151 -DG-RSPARVVQQLVAKLAE 168


>gi|15669754|ref|NP_248567.1| putative NTPase [Methanocaldococcus jannaschii DSM 2661]
 gi|1500452|gb|AAB99578.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 188

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 28/109 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTRE--PGGTPAAEAARHVLLSCGVDE 61
           FI+  G+ G GKTT    +   L+   Y V   +T+E   GG         + L    + 
Sbjct: 22  FIT--GMPGVGKTTLALKIAEKLKELGYKVGGFITKEIRDGGKRVGFKI--ITLDTNEET 77

Query: 62  FGAEAEAIVF----------AAARLDHVENV----IRPALMEGKILLCD 96
                  + +           A  +++++NV    I+ AL +  I++ D
Sbjct: 78  I------LAYVGDGKIKVGKYAVFIENLDNVGVEAIKRALKDADIIIID 120


>gi|229546245|ref|ZP_04434970.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
 gi|256852726|ref|ZP_05558096.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|307291059|ref|ZP_07570944.1| hypothetical protein HMPREF9509_01364 [Enterococcus faecalis
           TX0411]
 gi|229308769|gb|EEN74756.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
 gi|256711185|gb|EEU26223.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|306497713|gb|EFM67245.1| hypothetical protein HMPREF9509_01364 [Enterococcus faecalis
           TX0411]
 gi|315030758|gb|EFT42690.1| conserved hypothetical protein [Enterococcus faecalis TX4000]
          Length = 164

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L R L+ +              + +  R  +L    D+ G 
Sbjct: 4   KLIILRGNSGSGKTTIAKALHRCLKEQ----------SLLISQDVVRREMLRVK-DKTGN 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    ++ L E +
Sbjct: 53  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEMNHLFEGN 97

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 98  VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 127


>gi|222529027|ref|YP_002572909.1| guanylate kinase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455874|gb|ACM60136.1| guanylate kinase [Caldicellulosiruptor bescii DSM 6725]
          Length = 199

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 50/227 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  GL I   G  G GK T +  L          +   TR+P            +     
Sbjct: 1   MREGLLIVISGPAGTGKGTVVGRLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E       + +A    ++    ++ +  AL +G  ++                    L 
Sbjct: 61  EEEIKNERFLEYAEYNNNYYGTPKDFVFEALGKGYDVI--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           +++   + +++V  D  +I  LP   +   KR+  R +  E       E           
Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLVKRGTESEDEIRARLE----------- 149

Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215
                IA+N+    P+    +++   +    A  I  I+  E ++ R
Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189


>gi|260822581|ref|XP_002606680.1| hypothetical protein BRAFLDRAFT_209525 [Branchiostoma floridae]
 gi|229292024|gb|EEN62690.1| hypothetical protein BRAFLDRAFT_209525 [Branchiostoma floridae]
          Length = 671

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 73/234 (31%), Gaps = 57/234 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCG 58
           M  G  I   G  GAGKTT   +L R L +   D+         G P AE    +     
Sbjct: 1   MQKGNNIILMGSPGAGKTTVGRILARMLDKPVVDIDNDHLESYWGIPVAEQLSRL---GP 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                AE EA++   A                  ++                 S  +   
Sbjct: 58  DSFLQAEGEALLNFTAE---------------DCVIS-------------LSGSNPMHQR 89

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +++ I+         + LD+P    L R++     R        +  D++   + RQ F 
Sbjct: 90  AMEHITTLGT----VVFLDVPSADILHRLEVMKVNRIVGQGPETDMADIL---RYRQQFY 142

Query: 179 DIARNQPDR--CHIVDSAHSFQSVATNILNIVWELV------QKRVSPLSSKKD 224
           +       R    ++         A +I   V E++       K +S   S K+
Sbjct: 143 E------GRYDIRVLCGN---NESAEDIARKVQEVLTWHKNSNKHISTRQSTKE 187


>gi|60832495|gb|AAX37013.1| guanylate kinase 1 [synthetic construct]
          Length = 198

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 47/226 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 1   MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 44

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G +              R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 45  -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +         
Sbjct: 99  VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 155

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +           +  +P    +V    S       +   + E ++K
Sbjct: 156 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 191


>gi|305665197|ref|YP_003861484.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Maribacter sp.
           HTCC2170]
 gi|88709949|gb|EAR02181.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Maribacter sp.
           HTCC2170]
          Length = 381

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 22/191 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+ EG  GAGKTT  + + +    K         P      E         G   F  E
Sbjct: 180 FIAIEGNIGAGKTTLANKIAQDYNGKLVLERFADNPFLPKFYE-------DQGRYAFPLE 232

Query: 66  AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122
                F A R     ++  +  L +  ++  D  +  S  +           L       
Sbjct: 233 MS---FLADRYQQFTDDTSQFDLFKNFMV-SDYDIYKSLIFAQVTLQKDEFNLYRKLFNL 288

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   P   + L    D  L+ ++NR  + E +        + +  +K  + + D  +
Sbjct: 289 MYKEVKKPRIYVYLYQSTDRLLENIKNRGRVYEQSI-------EPIYLDKINKGYFDFFK 341

Query: 183 NQPD-RCHIVD 192
           + P+    I+D
Sbjct: 342 SYPEQNTLIID 352


>gi|325522620|gb|EGD01149.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Burkholderia sp. TJI49]
          Length = 638

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 20/87 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +L+++ L       +                 LL       G   +   
Sbjct: 473 GLSGAGKSTIANLVEKRLHALGKHTY-----------------LLDGDNVRHGLNRDLGF 515

Query: 71  FAAARLD---HVENVIRPALMEGKILL 94
             A R++    V  V R  L  G I+L
Sbjct: 516 TEADRVENIRRVAEVARLMLDAGLIVL 542


>gi|306846364|ref|ZP_07478915.1| fructose transport system kinase [Brucella sp. BO1]
 gi|306273207|gb|EFM55098.1| fructose transport system kinase [Brucella sp. BO1]
          Length = 218

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +    +  LL     
Sbjct: 27  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILDQRGLLDRKGS 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 87  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLELSRAAASVVGPEHRILLVEG 139

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176


>gi|217969819|ref|YP_002355053.1| sulfate adenylyltransferase, large subunit [Thauera sp. MZ1T]
 gi|217507146|gb|ACK54157.1| sulfate adenylyltransferase, large subunit [Thauera sp. MZ1T]
          Length = 639

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK++  +L+++ L    +  +                 LL       G   + 
Sbjct: 466 FTGLSGAGKSSIANLVEKKLHALGHHTY-----------------LLDGDNVRHGLNKDL 508

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +  +  G I+L         A+     S + +    ++E   
Sbjct: 509 GFTDADRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRSERRMARGLVEEGEF 560

Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
            E      + +D P+++   R          R  L+    +D
Sbjct: 561 VE------VFVDTPLEVAEARDPKGLYKKARRGELKNFTGID 596


>gi|88658097|ref|YP_507247.1| adenylate kinase [Ehrlichia chaffeensis str. Arkansas]
 gi|88599554|gb|ABD45023.1| adenylate kinase [Ehrlichia chaffeensis str. Arkansas]
          Length = 221

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 78/236 (33%), Gaps = 61/236 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T   +L +        V  T +         T      R V+ S   D    
Sbjct: 11  GPPGSGKGTQCHILSKIYST--ISVISTGDLLRSEAKLDTDDGRKIRQVIESG--DLVSD 66

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123
           +    +FA +    +  V    L++G                  R+ SQ  FL + L+E 
Sbjct: 67  DIVCKMFAKS----ISRVKSGFLLDGF----------------PRNLSQAEFLTEILEEY 106

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDYFERKDVMI----------- 169
           + +    D  I L L ++    R+  R   +       L++F+R    I           
Sbjct: 107 NSRI---DIVIQLQLDLETIKNRLYGRIVCKNCGQVSNLNFFDRAIDEIVCKFCKSSQLD 163

Query: 170 ----------HEKRRQIFLDIARNQP---DRCHIVDSAHSFQSVATNILNIVWELV 212
                      ++  Q   +I + +    D+   +D+    + V  +I + +  L+
Sbjct: 164 YRYDDKVEVIIKRVNQYDREIKKLENYYRDKIVCIDAGKPIEEVTCDIKDKIAHLI 219


>gi|17988166|ref|NP_540800.1| putative fructose transport system kinase [Brucella melitensis bv.
           1 str. 16M]
 gi|17983925|gb|AAL53064.1| pantothenate kinase [Brucella melitensis bv. 1 str. 16M]
          Length = 213

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 22  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 81

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 82  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 134

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 135 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 171


>gi|308178484|ref|YP_003917890.1| hypothetical protein AARI_27080 [Arthrobacter arilaitensis Re117]
 gi|307745947|emb|CBT76919.1| conserved hypothetical secreted protein [Arthrobacter arilaitensis
           Re117]
          Length = 183

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 51/209 (24%), Gaps = 58/209 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+G TT    +       + D          P     R                   
Sbjct: 13  GASGSGTTTLARAVADAWSVPHADSDDYFWIPTDPPYSKQRA------------------ 54

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             A R   +  V  P       +L            G         L  +          
Sbjct: 55  -PADRSRLMNEVFVP---RKAWVLS-----------GSIQGWGDDVLAHVDAF------- 92

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------RKDVMIHEKRRQIF 177
              + L L  ++ ++R+  R +LR S   DY E               D     + R   
Sbjct: 93  ---VFLTLDPEVRMRRLAERETLRLSR--DYLEPGAMGEFMVWAGGYDDPEFSGRSRAGH 147

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILN 206
               + +      +DSA     +   I++
Sbjct: 148 EKWLKTEERPVLRLDSAQPVAQMCQAIVD 176


>gi|288922954|ref|ZP_06417113.1| Polynucleotide 5'-hydroxyl-kinase [Frankia sp. EUN1f]
 gi|288345714|gb|EFC80084.1| Polynucleotide 5'-hydroxyl-kinase [Frankia sp. EUN1f]
          Length = 314

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 28/148 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G+ G+GK+T     +  L+   +  V V+R+P         R  L   G+       E  
Sbjct: 12  GLPGSGKSTAARRRRDQLRAAGHRAVVVSRDP--------LRDQL---GLTYGDTAGEKH 60

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
           V A          +   L  G  ++ D   + + A Q  R   +     +L+  ++  V+
Sbjct: 61  VTAVRDAQ-----VNTLLRAGVNVIVD---EMNLAAQYVRHWMET----ALRAGALFSVL 108

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESA 157
            D T   D+ V++ ++R   R      A
Sbjct: 109 -DLT---DVDVELCVRRDTLRPEPMPGA 132


>gi|225548831|ref|ZP_03769808.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 94a]
 gi|225370434|gb|EEG99870.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 94a]
          Length = 347

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          FI+  G  G GKTT I +L  FL +KN +++   
Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFS 68


>gi|20089787|ref|NP_615862.1| ATPase [Methanosarcina acetivorans C2A]
 gi|19914728|gb|AAM04342.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 640

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T  + + R+L      V     P              S    +
Sbjct: 269 QRGILIA--GPPGAGKSTFAAGVARYLNDHGQVVKTMESPRDLQVPPEITQY--SPLNGK 324

Query: 62  FGAEAEAIVF 71
               A+ ++ 
Sbjct: 325 MEDTADLLLL 334


>gi|83748970|ref|ZP_00945979.1| Deoxyguanosine kinase [Ralstonia solanacearum UW551]
 gi|207744199|ref|YP_002260591.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia
           solanacearum IPO1609]
 gi|83724393|gb|EAP71562.1| Deoxyguanosine kinase [Ralstonia solanacearum UW551]
 gi|206595604|emb|CAQ62531.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia
           solanacearum IPO1609]
          Length = 214

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 26/179 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT     L   L+       +   P   P                   + 
Sbjct: 9   IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPLQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             ++  A RL         A + G+ ++ D FL     +      +  L    L +   Q
Sbjct: 62  RFLLQRAQRLAA----WHKATLAGERIVADSFLPRDRLFAQLTLPADELV---LYDAMAQ 114

Query: 127 EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + P     D  + L    +  L R+  R    E+         DV   E+    + ++
Sbjct: 115 ALAPPPQRIDLVVCLQARAEDLLPRIARRAVPFEAGI-------DVEYLERICAAYGEL 166


>gi|70983199|ref|XP_747127.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|66844752|gb|EAL85089.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|159124011|gb|EDP49130.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
          Length = 932

 Score = 40.0 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 5/55 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAA----EAARHVLLS 56
           I  EG EG GK+T   +    L      DV   RE  G   A    E  +H++  
Sbjct: 112 IVLEGNEGTGKSTVARVYANVLFSTGITDVLTFREISGAALAAQGCEGLKHLISD 166


>gi|323453480|gb|EGB09351.1| hypothetical protein AURANDRAFT_36905 [Aureococcus anophagefferens]
          Length = 577

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           I F GI G GK+T +S +  +L+    DV +T
Sbjct: 375 IVFVGINGVGKSTSLSKVAYYLKEHGVDVMIT 406


>gi|323142200|ref|ZP_08077034.1| guanylate kinase [Phascolarctobacterium sp. YIT 12067]
 gi|322413263|gb|EFY04148.1| guanylate kinase [Phascolarctobacterium sp. YIT 12067]
          Length = 211

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 6/119 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G+ +   G  GAGK T   +L+  L    Y +   TR P        +        V +
Sbjct: 11  KGVLLVVSGPSGAGKGTICQMLRDQLPDLGYSISVTTRAPRTGEVDGESYFFKTIPDVKQ 70

Query: 62  FGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              + E + +A    ++       +   L  G+ +L +  +D   A Q ++   + +F+
Sbjct: 71  MIEKGELLEYAEVYGNYYGTPRKYVEEQLESGRDVLLE--IDIQGALQIKKRFPEGVFV 127


>gi|319652891|ref|ZP_08006997.1| adenylyl-sulfate kinase [Bacillus sp. 2_A_57_CT2]
 gi|317395468|gb|EFV76200.1| adenylyl-sulfate kinase [Bacillus sp. 2_A_57_CT2]
          Length = 199

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 41/162 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + +   L R+  +                   +L       G   + 
Sbjct: 32  FTGLSGSGKSTIANAVSHELFRQGIN-----------------EYVLDGDNVRHGLNKDL 74

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R +++     V +  +  GKI+        + A+     S +       +E   
Sbjct: 75  GFSEADRNENIRRIGEVAKLFVDSGKIV--------TTAFISPFRSDRETVRALFEE--- 123

Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
            E      + +D P++   +R          R  ++    +D
Sbjct: 124 GEF---IEVFIDCPLEECERRDPKKLYAKARRGEIKNFTGID 162


>gi|310659164|ref|YP_003936885.1| guanylate kinase [Clostridium sticklandii DSM 519]
 gi|308825942|emb|CBH21980.1| guanylate kinase [Clostridium sticklandii]
          Length = 204

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 36/173 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL +   G  GAGK T         ++    +   TR P          + +     +
Sbjct: 3   KKGLLVVVSGPSGAGKGTICKNFMELNKQMLLSISSTTRNPRENEIDGVNYNFITKQDFE 62

Query: 61  EFGAEAEAIVFAAARLDHV--------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           +       + +      HV        +  +   + +GK +L                  
Sbjct: 63  DLIGTDSLLEYV-----HVFGNYYGTPKKWVLECIEKGKDVL------------------ 99

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
             L ++ +  + V+E  PD  ++  LP    LK ++NR   R +  ++  E +
Sbjct: 100 --LEIEIVGAMKVKEKYPDAILVFVLPP--SLKELKNRIVTRGTETIEQIENR 148


>gi|256368528|ref|YP_003106034.1| uridine kinase [Brucella microti CCM 4915]
 gi|255998686|gb|ACU47085.1| uridine kinase [Brucella microti CCM 4915]
          Length = 213

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 22  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 81

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 82  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 134

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 135 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 171


>gi|154336847|ref|XP_001564659.1| dynein heavy chain [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061694|emb|CAM38725.1| putative dynein heavy chain [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 4242

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T + +L+  LQR    V      P   P     R  LL         +
Sbjct: 1943 VVLVGPSGSGKSTLVKVLRHALQRLGKMVPLYIVNPKALP-----RDQLLG----HMDPD 1993

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 F     D  + V++        + CD                   +++SL  +
Sbjct: 1994 TR-EWFDGVLTDAAKKVVKEETSVQSWIFCD-------------GDIDPEWVESLNSV 2037


>gi|124028360|ref|YP_001013680.1| ABC transporter [Hyperthermus butylicus DSM 5456]
 gi|123979054|gb|ABM81335.1| predicted ABC transporter [Hyperthermus butylicus DSM 5456]
          Length = 216

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--VDE 61
           G  +   G  G+GKTT + +L   L+    +V V   P  +  A+  R V++      DE
Sbjct: 30  GELVVIVGPNGSGKTTLLRILAGLLRPSRGEVRVCGHPPWSLEAKRCRGVVMHHSFLYDE 89

Query: 62  FGAEAEAIVFA 72
                   ++A
Sbjct: 90  LTVAENIELYA 100


>gi|146299242|ref|YP_001193833.1| deoxynucleoside kinase [Flavobacterium johnsoniae UW101]
 gi|146153660|gb|ABQ04514.1| deoxynucleoside kinase [Flavobacterium johnsoniae UW101]
          Length = 204

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 38/199 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL +  +          EP      +   +  L     +    +
Sbjct: 3   IAIAGNIGAGKTTLTKLLAKHFK---------WEP---HYEDVVDNPYLDDFYHQMERWS 50

Query: 67  EAI-VFAAARLDHVENVIRPALMEGKILLCDR--------FLDSSYAYQGERDSSQHLFL 117
             + ++           IR     GK ++ DR        F  + YA  G   S      
Sbjct: 51  FNLQIYFLNSRFRQVQQIR---ESGKKIIQDRTIYEDAYIFAPNLYA-MGLMTSRDFENY 106

Query: 118 DSLQEISVQEVM-PDCTIILD--LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            SL E+    V  PD  I L   +P  +G   +  R    E++         +    +  
Sbjct: 107 TSLFELMESLVKAPDLLIYLRSTIPNLVGQ--IHKRGREYENSI-------SIDYLSRLN 157

Query: 175 QIFLDIARNQ-PDRCHIVD 192
           + +    +     +  I+D
Sbjct: 158 ERYEAWIQTYTKGKLLIID 176


>gi|325967750|ref|YP_004243942.1| GTPase [Vulcanisaeta moutnovskia 768-28]
 gi|323706953|gb|ADY00440.1| GTPase [Vulcanisaeta moutnovskia 768-28]
          Length = 272

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 15/102 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEA-----ARHVL 54
           FI   G  G+GKTT +S    +L+   YDV +             P  +      AR ++
Sbjct: 21  FIV--GTAGSGKTTLVSTFAEWLENNQYDVAIVNLDPAVEYVPYVPDIDIRDVISARELM 78

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   G+   AI   A R   ++N +         +L D
Sbjct: 79  RKYKLGPNGSIIAAIDMLAVRAQEIKNQVMDIGAN--YVLID 118


>gi|298250206|ref|ZP_06974010.1| adenylylsulfate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297548210|gb|EFH82077.1| adenylylsulfate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 187

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          N+G  I F G+ GAGK+T    L++ L++   +V
Sbjct: 3  NTGFTIWFTGLSGAGKSTLSDALEKRLRQHGRNV 36


>gi|111115475|ref|YP_710093.1| spermidine/putrescine ABC transporter, ATP- binding protein
          [Borrelia afzelii PKo]
 gi|216263662|ref|ZP_03435657.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia afzelii ACA-1]
 gi|123145659|sp|Q0SML1|POTA_BORAP RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|110890749|gb|ABH01917.1| spermidine/putrescine ABC transporter, ATP- binding protein
          [Borrelia afzelii PKo]
 gi|215980506|gb|EEC21327.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia afzelii ACA-1]
          Length = 347

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FI+  G  G GKTT I +L  FL +KN +++ 
Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYF 66


>gi|288917127|ref|ZP_06411497.1| adenylylsulfate kinase [Frankia sp. EUN1f]
 gi|288351496|gb|EFC85703.1| adenylylsulfate kinase [Frankia sp. EUN1f]
          Length = 613

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
             GL I F G+ GAGK+T   LL   L  +   V +
Sbjct: 426 RRGLTILFTGLSGAGKSTLAGLLACRLLERGRRVTL 461


>gi|163733625|ref|ZP_02141068.1| hypothetical protein RLO149_18278 [Roseobacter litoralis Och 149]
 gi|161393413|gb|EDQ17739.1| hypothetical protein RLO149_18278 [Roseobacter litoralis Och 149]
          Length = 208

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 25/189 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60
           N    I+  G   +GK+T    L   L             G        R   L++    
Sbjct: 21  NKRRLIALAGPPASGKSTLAHALADHLPNS----CALPMDGFHLDNRILRERGLIARKGA 76

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-------- 112
               +   +     RL + ++V+ P        L DR LD + A  G  ++S        
Sbjct: 77  PETFDVAGLQHLLQRLQNEDDVVYP--------LFDRHLDCAVAGAGIAEASATTVIVEG 128

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD---YFERKDVMI 169
            +L LD+     ++ +  D  + + +  D+   R+  R+     +  D     E+ D+  
Sbjct: 129 NYLLLDAPYWRDLRALW-DFAVYVSVSPDVLRDRLLTRWHDHGFSREDAQAKVEQNDMPN 187

Query: 170 HEKRRQIFL 178
            E  R   L
Sbjct: 188 AETTRNALL 196


>gi|73670632|ref|YP_306647.1| shikimate kinase [Methanosarcina barkeri str. Fusaro]
 gi|72397794|gb|AAZ72067.1| shikimate kinase [Methanosarcina barkeri str. Fusaro]
          Length = 169

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 74/206 (35%), Gaps = 44/206 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I+  G+ GAGK+T    L + L     DV H+ RE  G P                   E
Sbjct: 3   ITLIGMAGAGKSTIGRALAKRLGYTFIDVDHLIRENTGMPLQTLIDK---EGDSAFIRFE 59

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-SLQEIS 124
            EAI+        +E + R  +  G  ++      S  A    +  S+ +FLD + + I+
Sbjct: 60  EEAIL-------SLEQIDRSVISPGGSVI-----YSEKAMNHLKKISKIIFLDTAFRSIA 107

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +                   R +    LR+ +  + FE +    ++K    + D +   
Sbjct: 108 RRLPN---------------ARKRGIVGLRDRSLKELFE-ERKGFYQK----YADFSIKL 147

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210
             R        + Q +A  I+ I +E
Sbjct: 148 KGR-------ENIQDIAEMIVEICFE 166


>gi|15594987|ref|NP_212776.1| spermidine/putrescine ABC transporter, ATP-binding protein (potA)
          [Borrelia burgdorferi B31]
 gi|195941462|ref|ZP_03086844.1| spermidine/putrescine ABC transporter, ATP-binding protein (potA)
          [Borrelia burgdorferi 80a]
 gi|216264359|ref|ZP_03436351.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 156a]
 gi|218249244|ref|YP_002375143.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi ZS7]
 gi|221217859|ref|ZP_03589326.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 72a]
 gi|223889366|ref|ZP_03623952.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 64b]
 gi|224532967|ref|ZP_03673575.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi WI91-23]
 gi|224533360|ref|ZP_03673954.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi CA-11.2a]
 gi|225550006|ref|ZP_03770967.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 118a]
 gi|226320359|ref|ZP_03795928.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 29805]
 gi|226321340|ref|ZP_03796867.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi Bol26]
 gi|81816027|sp|O51587|POTA_BORBU RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|2688562|gb|AAB91525.1| spermidine/putrescine ABC transporter, ATP-binding protein (potA)
          [Borrelia burgdorferi B31]
 gi|215980832|gb|EEC21639.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 156a]
 gi|218164432|gb|ACK74493.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi ZS7]
 gi|221192165|gb|EEE18385.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 72a]
 gi|223885052|gb|EEF56156.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 64b]
 gi|224512084|gb|EEF82477.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi WI91-23]
 gi|224513525|gb|EEF83882.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi CA-11.2a]
 gi|225369465|gb|EEG98917.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 118a]
 gi|226233136|gb|EEH31888.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi Bol26]
 gi|226234222|gb|EEH32934.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi 29805]
 gi|312148336|gb|ADQ30995.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi JD1]
 gi|312149432|gb|ADQ29503.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia burgdorferi N40]
          Length = 347

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          FI+  G  G GKTT I +L  FL +KN +++   
Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFS 68


>gi|288923619|ref|ZP_06417727.1| ABC transporter related protein [Frankia sp. EUN1f]
 gi|288345034|gb|EFC79455.1| ABC transporter related protein [Frankia sp. EUN1f]
          Length = 625

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 43/172 (25%)

Query: 4   GLFISFEGIEGAGKTTHISLLKR--------------FLQRKNYDVHVTREPGGTPAAEA 49
           G FI+  G  G+GK+T   LL R               L+  +    +TR          
Sbjct: 361 GEFIAVTGPTGSGKSTLARLLCRIEDPTEGTISYGGVELRAASRTEVLTR-----IGLVP 415

Query: 50  ARHVLLSC---GVDEFGAEAE-AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
            R ++L+         G E E A + AA     ++  I     +   ++ +R        
Sbjct: 416 QRPLVLTGTIADNLRLGREIELADLRAACHAAALDEFIMSLPDQYDTVVGER-------- 467

Query: 106 QGERDSSQHLFLDSLQEISVQEV-MPDCTII------LDLPVDIG-LKRVQN 149
            G     Q   L     ++   +  P   ++      LD+  +   L+R+++
Sbjct: 468 GGTLSGGQGQRLA----LARGLLGRPAVLVLDDVTSALDVETEAAVLRRLRD 515


>gi|254671832|emb|CBA03981.1| cell division protein [Neisseria meningitidis alpha275]
          Length = 350

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 157 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 211

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 212 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 262

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 263 AMPDAPHEIIVVLD 276


>gi|199597679|ref|ZP_03211107.1| hypothetical protein LRH_11999 [Lactobacillus rhamnosus HN001]
 gi|258509824|ref|YP_003172575.1| kinase [Lactobacillus rhamnosus GG]
 gi|199591486|gb|EDY99564.1| hypothetical protein LRH_11999 [Lactobacillus rhamnosus HN001]
 gi|257149751|emb|CAR88724.1| Kinase [Lactobacillus rhamnosus GG]
 gi|259651085|dbj|BAI43247.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 172

 Score = 40.0 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 63/211 (29%), Gaps = 50/211 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT    L++ L                 + +  R  +L+    
Sbjct: 1   MKQ--LIILRGNSGSGKTTTAKALRKHLAN-----------SLLISQDVVRRDMLAEKDK 47

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I   A          R      +I++ +  + S+  Y           L +L
Sbjct: 48  PNSPNIELIDLIA----------RFGFSHQQIVIVE-GILSAARY--------GQMLKAL 88

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLD 179
              + Q          DL  D  L+R  +R                  +H   R   +L 
Sbjct: 89  MTTADQS----LVYYFDLSFDETLRRHAHRPQAAAFGAE--------AMHRWFRPHDYLG 136

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +        H++ +  S  +V + IL  + +
Sbjct: 137 VPNE-----HLIQADQSQDTVVSRILADLNK 162


>gi|310791932|gb|EFQ27459.1| thermoresistant glucokinase family carbohydrate kinase [Glomerella
           graminicola M1.001]
          Length = 182

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 65/217 (29%), Gaps = 51/217 (23%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I F  G  G+GKTT    L   L     +  D H           EA          D +
Sbjct: 8   IVFLTGPTGSGKTTIAKYLTESLHMNFIEGDDYHPKENVEKMHRGEAL------TDDDRW 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSL 120
           G           R + +  +    L  G ++ C     S+   AY+     + H   D  
Sbjct: 62  GWLDSL------RDEALRELESDGL-RGVVVAC-----SALKRAYRDVLRGASHPEKDIF 109

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                          L  P D+  +RV+NR+     A L                 F  +
Sbjct: 110 VNFVT----------LHAPEDVLFERVKNRHGHFAGANL-------------VHSQFQSL 146

Query: 181 ---ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                ++ D    +D     + V  + L  + EL+ +
Sbjct: 147 DPPQEDEAD-VVGIDVQPPMEEVERDALERLEELLSR 182


>gi|171186018|ref|YP_001794937.1| GTPase [Thermoproteus neutrophilus V24Sta]
 gi|170935230|gb|ACB40491.1| protein of unknown function ATP binding [Thermoproteus
          neutrophilus V24Sta]
          Length = 250

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M +  FI   G  G+GK+T +S L  +L+ + +DV
Sbjct: 2  MYTVFFI---GTAGSGKSTLVSALSNWLEDQGFDV 33


>gi|55959192|emb|CAI15062.1| guanylate kinase 1 [Homo sapiens]
          Length = 217

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 71/226 (31%), Gaps = 47/226 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 22  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 65

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G +              R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 66  -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119

Query: 116 FLDS----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVM 168
            LD     ++ I   ++ P   I + +      +  +R++ R +  E + +         
Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 176

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +           +  +P    +V    S       +   + E ++K
Sbjct: 177 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 212


>gi|326798926|ref|YP_004316745.1| Guanylate kinase [Sphingobacterium sp. 21]
 gi|326549690|gb|ADZ78075.1| Guanylate kinase [Sphingobacterium sp. 21]
          Length = 188

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 27/174 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDE 61
           G  I F    GAGKTT +  L      K        TREP          + +       
Sbjct: 3   GKLIIFSAPSGAGKTTIVKWLLEKFNDKIAFSISASTREPRDGEVNGKDYYFITKEEFLH 62

Query: 62  FGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             A+ E +    V++      +   I    MEGK ++ D          G     +    
Sbjct: 63  RIAKKEFVEFEEVYSGTFYGTLRAEIERIWMEGKAVIFD------IDVIGGLHLKKKFGE 116

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           ++L                  P   D+ ++R++ R +  E    +  E+    +
Sbjct: 117 NALAIFVQ-------------PPSLDVLVERLRGRGTDTEEKLKERIEKAGKEL 157


>gi|312903602|ref|ZP_07762778.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
 gi|310632955|gb|EFQ16238.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
 gi|315577212|gb|EFU89403.1| conserved hypothetical protein [Enterococcus faecalis TX0630]
          Length = 188

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    DE G 
Sbjct: 28  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 77  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151


>gi|209549571|ref|YP_002281488.1| hypothetical protein Rleg2_1977 [Rhizobium leguminosarum bv.
          trifolii WSM2304]
 gi|209535327|gb|ACI55262.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          trifolii WSM2304]
          Length = 173

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          + I F G+ G+GKTT    L + L      V    +       + AR V
Sbjct: 1  MLIIFGGLPGSGKTTVARALAKRLGAVYVRVDTIEQAIRASGGDPARDV 49


>gi|124027623|ref|YP_001012943.1| hypothetical protein Hbut_0744 [Hyperthermus butylicus DSM 5456]
 gi|123978317|gb|ABM80598.1| conserved crenarchaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 340

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 11/92 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRK------NYDVHVTREPGGTPAA-EAARHVLLS-CGVDEF 62
           G EG GKT  +  L   L+          D    R+PG   A  +  R ++L        
Sbjct: 31  GPEGCGKTRLLRELVARLREHSSYLVAYIDALEERDPGRAVAGSDELRRLILDAVRSAGG 90

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
           G     +V+A AR   V   I   L+EG+ ++
Sbjct: 91  GPLGVILVYAVAR---VLASIERRLVEGRHVV 119


>gi|226874831|ref|NP_001152862.1| guanylate kinase isoform a [Homo sapiens]
 gi|119590262|gb|EAW69856.1| guanylate kinase 1, isoform CRA_e [Homo sapiens]
 gi|194383634|dbj|BAG64788.1| unnamed protein product [Homo sapiens]
          Length = 218

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 71/226 (31%), Gaps = 47/226 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 22  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 65

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G +              R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 66  -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119

Query: 116 FLDS----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVM 168
            LD     ++ I   ++ P   I + +      +  +R++ R +  E + +         
Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 176

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +           +  +P    +V    S       +   + E ++K
Sbjct: 177 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 212


>gi|157826042|ref|YP_001493762.1| adenylate kinase [Rickettsia akari str. Hartford]
 gi|166219996|sp|A8GPC9|KAD_RICAH RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|157800000|gb|ABV75254.1| adenylate kinase [Rickettsia akari str. Hartford]
          Length = 212

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 82/237 (34%), Gaps = 59/237 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +           +       +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIALGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDS---L 120
           EAE I     + + V N I   +++        FL SS AY  G         L+     
Sbjct: 45  EAELINNYVKQGELVPNAIVNQVIKN-------FLLSS-AYKNGYILDGYPRNLEQAKFF 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------------- 159
           +    +++     I  D+  ++ +KRV  RYS +    +                     
Sbjct: 97  ESFIKEKIK---IIYFDVSDELLIKRVLGRYSCKNCRKIYNSYFLQPKTDNVCDVCGSST 153

Query: 160 -DYFERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
            DY +  +  + +KR +++      +          ++V+ + + Q +  +I  I+ 
Sbjct: 154 FDYRKDDNEEVVKKRIEVYKTETYPLIDYYKNSGNFYLVNGSKNEQEIEIDIQKILK 210


>gi|307721117|ref|YP_003892257.1| adenylate kinase [Sulfurimonas autotrophica DSM 16294]
 gi|306979210|gb|ADN09245.1| Adenylate kinase [Sulfurimonas autotrophica DSM 16294]
          Length = 216

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 68/237 (28%), Gaps = 56/237 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    L +                     +  R  + +    E G  A
Sbjct: 3   IILLGAPGAGKGTQAQFLTKK-----------YNIPQISTGDMLRAAIKAG--TEMGKMA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +A   A      V + I   L++ +I   D    + Y   G   +           ++  
Sbjct: 50  KA---AMDAGQLVTDDIIIGLVKDRIAQDD--CKNGYLLDGFPRTLPQAD-----AVTNA 99

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHE-------- 171
            +  D  I +D+  +  +KR+  R +   S             E KD    E        
Sbjct: 100 GIEIDAVIEIDVADEEIVKRMSGRRAHLASGRTYHVIYNPSKIEGKDDETGEDLVQRDDD 159

Query: 172 ---------KRRQ--------IFLDIARNQPD-RCHIVDSAHSFQSVATNILNIVWE 210
                    K            +  +A+  P+ +   VD       V   I++ + E
Sbjct: 160 KEAVVLDRLKVYHEQTEPLIGYYKALAKKNPNLKYITVDGTADIADVEKAIVSELGE 216


>gi|283786698|ref|YP_003366563.1| adenosine 5-phosphosulfate kinase [Citrobacter rodentium ICC168]
 gi|282950152|emb|CBG89788.1| adenosine 5-phosphosulfate kinase [Citrobacter rodentium ICC168]
          Length = 201

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 34/148 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ + F G+ G+GK+T    L+  L +     +                 LL      
Sbjct: 26  HRGVVVWFTGLSGSGKSTIAGALEEALHKLGLSTY-----------------LLDGDNLR 68

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G  ++     A R +++     V R  L  G ++L         A+   R + +    +
Sbjct: 69  HGLCSDLGFSDADREENIRRVGEVARLMLDAGLVVLT--------AFISPRRAERQWVRE 120

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + E   + +     + +D P++I   R
Sbjct: 121 RVGE--GRFIE----VFVDTPLEICEAR 142


>gi|238791725|ref|ZP_04635362.1| LAO/AO transport system kinase [Yersinia intermedia ATCC 29909]
 gi|238728829|gb|EEQ20346.1| LAO/AO transport system kinase [Yersinia intermedia ATCC 29909]
          Length = 325

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK+T +  L   L  + + V  +  +P     GG+   +  R + LS     F  
Sbjct: 55  GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPISGGSILGDKTRMLNLSRAEHAFVR 114

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILL 94
              +             +I      G  ++
Sbjct: 115 PVPSGGHLGGISQSTRELILLCEAAGYDVI 144


>gi|227539234|ref|ZP_03969283.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240916|gb|EEI90931.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 170

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 31/170 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  I F    GAGKTT +  L      K        TREP G        + +      
Sbjct: 2   KGKLIIFSAPSGAGKTTIVRHLLNKYPDKIEFSISASTREPRGEEVDGKDYYFISKEEFL 61

Query: 61  EFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              A+ E I    V++      + + +     +GK ++ D                    
Sbjct: 62  HKIAKQEFIEFEEVYSGTFYGTLRSEVERIWEKGKHVIFD-------------------- 101

Query: 117 LDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           +D +  + ++   PD   +I +  P   ++   R++ R +  E    + F
Sbjct: 102 IDVVGGLRLRSKFPDQALSIFVQ-PPSLEVLKDRLRGRGTDSEDKLKERF 150


>gi|183222060|ref|YP_001840056.1| NadR family transcriptional regulator [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912126|ref|YP_001963681.1| NAD metabolism ATPase/kinase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776802|gb|ABZ95103.1| ATPase/kinase involved in NAD metabolism [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167780482|gb|ABZ98780.1| Putative transcriptional regulator, NadR family [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 347

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 63/181 (34%), Gaps = 40/181 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G E  GKTT    L    Q                  E AR  L      +    A
Sbjct: 157 IVLTGSESVGKTTLAKKLADHFQ-------------TNWIPEYARDYL----EKKSTPMA 199

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E+     A+  H+ + +  A     IL  D  L ++  Y       Q   +  L E ++ 
Sbjct: 200 ESDFLPIAKG-HLLSEVEAAKSSHGILFLDTDLLTTKVY--LERYYQRE-IPWLTERALG 255

Query: 127 EVMPDCTIILDLPV--------DIGLKR--VQNRY-SLRESACLDYF-------ERKDVM 168
               D ++ LD+ +        D+G +R  ++ R+    E A  D+F       ER+ + 
Sbjct: 256 LQY-DTSLFLDIDIPWEKDKLRDLGEEREGMKTRFLEAMEEAKRDFFWVKGNFMERERLA 314

Query: 169 I 169
           I
Sbjct: 315 I 315


>gi|186472046|ref|YP_001859388.1| ABC transporter related [Burkholderia phymatum STM815]
 gi|184194378|gb|ACC72342.1| ABC transporter related [Burkholderia phymatum STM815]
          Length = 254

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48
          SG FI+  G  G GK+T + +L   L+R +  V V   P   P  E
Sbjct: 31 SGEFITVVGPSGCGKSTLLKILAGILRRSSGKVAVAGRPIDGPNRE 76


>gi|78189187|ref|YP_379525.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
 gi|115312143|sp|Q3AR93|AROK_CHLCH RecName: Full=Shikimate kinase; Short=SK
 gi|78171386|gb|ABB28482.1| shikimate kinase [Chlorobium chlorochromatii CaD3]
          Length = 190

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 43/211 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  G+GK+T   LL   L    Y+             ++   +    G       
Sbjct: 7   LIFLTGFSGSGKSTIGPLLANSL---GYEFVDLDALIERECGKSINQIFAEAGE------ 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                  AA   H E  +   LM  K ++            G     Q    + +++   
Sbjct: 58  -------AAFRQHEEQTLETLLMRRKTVVS----------LGGGVLEQPRAFELVRQAGT 100

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARN 183
                   + L  PV    +R+ N+      +    +   ++++   +K  ++   +AR 
Sbjct: 101 -------VVYLKSPVKTLARRLSNKTDRPLLKGEQGEKLSQEEIE--QKIAEL---LARR 148

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           +P R     +  + ++ A  I + V EL +K
Sbjct: 149 EP-RYEC--ADITVETDAKRIGSTVEELTRK 176


>gi|315497199|ref|YP_004086003.1| dephospho-CoA kinase [Asticcacaulis excentricus CB 48]
 gi|315415211|gb|ADU11852.1| dephospho-CoA kinase [Asticcacaulis excentricus CB 48]
          Length = 196

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 40/215 (18%)

Query: 11  GIEGA---GKTTHISLLKRFLQRKNYDV----------HVTREPGGTPAAEAARHVLLSC 57
           G+ G+   GK+T   +       +   V          + T EP      EA   VL   
Sbjct: 5   GLTGSIGMGKSTIARMFAD----EGLPVWDADETVHRLYATSEPLKAALVEAFGEVLTDG 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-F 116
            VD     A+  +   A+ D    +   AL+    +  DR  ++   +     +   L  
Sbjct: 61  SVD----RAKLSLNLKAKPDGFARLN--ALVHPATV-ADR--EAFLVHHAAAGTRLTLCD 111

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L E   Q    D  +++  P ++   RV  R  +      D   R+     ++RR  
Sbjct: 112 IPLLFETGAQTSF-DKVVVVSAPPEVQAARVLARPGMTAEKFADILARQMPDAEKRRRAD 170

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           F            ++D++ + Q+    +  I+ +L
Sbjct: 171 F------------VIDTSQTLQANRQQVREIIRDL 193


>gi|224532153|ref|ZP_03672785.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia valaisiana VS116]
 gi|224511618|gb|EEF82024.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia valaisiana VS116]
          Length = 347

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          FI+  G  G GKTT I +L  FL +KN +++   
Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLNQKNGEIYFFS 68


>gi|293572988|ref|ZP_06683930.1| deoxyguanosIne kinase [Enterococcus faecium E980]
 gi|291606890|gb|EFF36270.1| deoxyguanosIne kinase [Enterococcus faecium E980]
          Length = 219

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 42/234 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++   ++      +  Y+     E      A                 E
Sbjct: 4   IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 48

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114
             A +     L+     I+ A+ +   +L DR  + DS           A + E      
Sbjct: 49  QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 107

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +++
Sbjct: 108 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 164

Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
             + +        +   I +D           + + V   I   + E+ Q  ++
Sbjct: 165 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTELA 218


>gi|254421825|ref|ZP_05035543.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335]
 gi|196189314|gb|EDX84278.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335]
          Length = 951

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 86/234 (36%), Gaps = 41/234 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCG 58
           + G FI+  G  G+GK+T + LL  F   ++  V+   +        A R    V+L  G
Sbjct: 741 HPGEFIALVGPSGSGKSTVLRLLLGFESPQSGTVYYDNQDVAGLDVAAVRRQLGVVLQNG 800

Query: 59  VDEFGAEAE-----AIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
               G+  E     A++       AA +      IR   ME   ++ +          G 
Sbjct: 801 RINAGSLFENISGGALISLEDAWRAAEMAGFAEDIRSFPMEMHTVISEG--------GGN 852

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
               Q   L   + +++    P+  ++LD         + NR     S  LD      ++
Sbjct: 853 LSGGQRQRLMIARALALN---PNI-LLLD----EATSALDNRTQAIVSQSLDRLNVTRIV 904

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAH-----SFQSVATNILNIVWELVQKRVS 217
           +  +   I         DR +++ S       SF  +A     +  +L++++++
Sbjct: 905 VAHRLSTI------RHADRIYVIKSGRVVQQGSFDQLAQE-EGVFKQLIKRQMA 951


>gi|150024370|ref|YP_001295196.1| deoxynucleoside kinase [Flavobacterium psychrophilum JIP02/86]
 gi|149770911|emb|CAL42376.1| Probable deoxynucleoside kinase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 204

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 30/195 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL +             EP      +   +  L     +   E 
Sbjct: 3   IAIAGNIGAGKTTLTKLLAKHFN---------WEP---HFEDVVDNPYLDDFYHQM--ER 48

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDS 119
            +       L+     +      GK ++ DR  + D+     +    G   +       S
Sbjct: 49  WSFNLQIYFLNSRFRQVLQIRESGKKIIQDRTIYEDAHIFAPNLHAMGLMTNRDFQNYSS 108

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           L E+    V  PD  I L          + N          DY     +    +  + + 
Sbjct: 109 LFELMEGLVGPPDLLIYL-------RSSIPNLVGQIHKRGRDYENSISIDYLSRLNERYE 161

Query: 179 DIARN-QPDRCHIVD 192
             A +    +  I+D
Sbjct: 162 AWAESYNKGKLLIID 176


>gi|221135324|ref|ZP_03561627.1| adenylylsulfate kinase [Glaciecola sp. HTCC2999]
          Length = 197

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +LL++ L  +    +                 LL       G   +   
Sbjct: 32  GLSGSGKSTIANLLEQKLVAQGKHTY-----------------LLDGDNVRHGLCGDLGF 74

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R++++     V +  +  G +++         A+     + +    + L E   + 
Sbjct: 75  SDKDRVENIRRISEVAKLFVDSGTLVIT--------AFISPFKADRDYCREILDE--SEF 124

Query: 128 VMPDCTIILDLPVDIGLKR 146
           V     I +D P+++   R
Sbjct: 125 VE----IFIDTPLEVCEAR 139


>gi|37678296|ref|NP_932905.1| signal recognition particle GTPase [Vibrio vulnificus YJ016]
 gi|37197035|dbj|BAC92876.1| signal recognition particle GTPase [Vibrio vulnificus YJ016]
          Length = 437

 Score = 40.0 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 240 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 295

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 296 TGADSASVIYDAIEAAKARGVDVVIAD 322


>gi|255656568|ref|ZP_05401977.1| guanylate kinase [Clostridium difficile QCD-23m63]
 gi|296449980|ref|ZP_06891744.1| guanylate kinase [Clostridium difficile NAP08]
 gi|296878361|ref|ZP_06902369.1| guanylate kinase [Clostridium difficile NAP07]
 gi|296261250|gb|EFH08081.1| guanylate kinase [Clostridium difficile NAP08]
 gi|296430659|gb|EFH16498.1| guanylate kinase [Clostridium difficile NAP07]
          Length = 205

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 53/167 (31%), Gaps = 26/167 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL +   G  GAGK T    L +        V   TR+P            +     +
Sbjct: 4   KKGLLLVVSGPSGAGKGTICKELLKENDTIKLSVSATTRKPRTGEVDGVNYFFISKEKFE 63

Query: 61  EFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           E   + E + +A          ++ I   L +G+ +L +         QG +        
Sbjct: 64  EMIEKGEFLEYAQIYDNFYGTPKSAIMECLEKGQDVLLE------IEMQGAK-------- 109

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
             ++E+  +        I  LP   +    R+  R +  E+     F
Sbjct: 110 -QIKEVCPEG-----VFIFVLPPSLEELKNRIVGRGTETEAEIEKRF 150


>gi|170078077|ref|YP_001734715.1| excinuclease ABC subunit A [Synechococcus sp. PCC 7002]
 gi|169885746|gb|ACA99459.1| excinuclease ABC, A subunit [Synechococcus sp. PCC 7002]
          Length = 941

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL 54
           G  +S  G+ G+GK+T +  LL   LQ   N +V   +E GG    ++   V+
Sbjct: 632 GKLVSVTGVSGSGKSTLMNELLYPALQHSLNRNVPFPKELGGVKGLKSIDKVI 684


>gi|150024453|ref|YP_001295279.1| guanylate kinase [Flavobacterium psychrophilum JIP02/86]
 gi|149770994|emb|CAL42461.1| Guanylate kinase [Flavobacterium psychrophilum JIP02/86]
          Length = 191

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVL---- 54
           MN G  + F    G+GKTT +  L  +  L  +      TRE  G    E   + +    
Sbjct: 1   MNKGKLLVFSAPSGSGKTTIVRHLLNQEDLNLEFSVSCTTREARGEETNEKDYYFISLED 60

Query: 55  --LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                  +EF    E   +       +++ +     +GK ++ D
Sbjct: 61  FKKHIKAEEFVEWEEV--YRDNFYGTLKSEVERIWAKGKNVIFD 102


>gi|187923748|ref|YP_001895390.1| adenylyl-sulfate kinase [Burkholderia phytofirmans PsJN]
 gi|259586086|sp|B2T3K5|CYSC_BURPP RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
          AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|187714942|gb|ACD16166.1| Adenylyl-sulfate kinase [Burkholderia phytofirmans PsJN]
          Length = 179

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 14/85 (16%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGK+T  + L + L    +   V          +  R  L +          E + 
Sbjct: 13 GLSGAGKSTLANALHQRLMEAGHAAIVL-------DGDVLRRGLNADLGFTPEDRTENL- 64

Query: 71 FAAARLDHVENVIRPALMEGKILLC 95
              R+ HV  +    + +G +++ 
Sbjct: 65 ---RRIAHVAAL---FMQQGFVVIA 83


>gi|76363792|ref|XP_888607.1| adenylate kinase  [Leishmania major strain Friedlin]
 gi|12311822|emb|CAC22640.1| putative adenylate kinase [Leishmania major strain Friedlin]
          Length = 211

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 62/223 (27%), Gaps = 45/223 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
            FI   G  G+GK T+ + L                     A E  R    S   +  + 
Sbjct: 21  FFIL--GGPGSGKGTNCARLVE-----------DFGYTHFSAGELLREAARSGTGNLAKI 67

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G    +          V + I   L+   I+  D      Y   G         +     
Sbjct: 68  GDIIRSGNI-------VPSEITVELLRQAIV--DHPNSVGYVIDGFPRKEDQARM----- 113

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  P   +  D       +R+ +R +          E++D    E  R  F    +
Sbjct: 114 FEEGIAKPAGILYYDCSEATMEERLLSRGTNST-------EKRDDDAAETIRHRFRVNVQ 166

Query: 183 N---------QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                        RCH++D+     +V      +  E+ +K +
Sbjct: 167 ECMPVVEAYKANGRCHVIDANRDRDTVYAETKKVFLEMGEKPL 209


>gi|315150358|gb|EFT94374.1| conserved hypothetical protein [Enterococcus faecalis TX0012]
          Length = 188

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    DE G 
Sbjct: 28  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 77  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151


>gi|313619918|gb|EFR91475.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          innocua FSL S4-378]
          Length = 95

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|313609966|gb|EFR85346.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          monocytogenes FSL F2-208]
          Length = 94

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|172036900|ref|YP_001803401.1| carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp.
           ATCC 51142]
 gi|171698354|gb|ACB51335.1| carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp.
           ATCC 51142]
          Length = 184

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 45/196 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT  + L + L    YD      P      E    +     +++       + 
Sbjct: 18  GVSGSGKTTIGTALNQQLGYAFYDADDFHPP------ENIAKMSQGIPLNDSDRLPWLL- 70

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                   +++VI     E K  +    +  S   Q  RD  +    D +          
Sbjct: 71  -------AIKSVINENQKEDKNAV----ITCSALKQAYRDLLEQNTTDIIW--------- 110

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
              I L    +  LKR+Q+R         ++F ++++++ +     F  +   +P+    
Sbjct: 111 ---IYLKGSYETFLKRLQHRS--------EHFMKENMLMSQ-----FQIL--EEPENAMT 152

Query: 191 VDSAHSFQSVATNILN 206
           +D   S + +   I+N
Sbjct: 153 IDVNLSVEEIVQTIIN 168


>gi|172035088|ref|YP_001801589.1| hypothetical protein cce_0171 [Cyanothece sp. ATCC 51142]
 gi|171696542|gb|ACB49523.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 509

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 38/180 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G+ G+GKTT    L +     + +  + R       ++A R      G   
Sbjct: 337 HQGKIIMMSGLSGSGKTTMAKYLAQ-----DINAILIR-------SDAVRK---HRGNIP 381

Query: 62  FGAEAEAIVFAAARLD-HVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                +  +++AA      + +I+       EG  ++ D                +H + 
Sbjct: 382 LDETGDNELYSAAMNQETYKTLIQLGEMMAKEGFNVILD------------AKFDRHQWR 429

Query: 118 DSLQEISVQ-EVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDV---MIHEK 172
           +++ EI+ +  +    TI     P+ I   R+  R      A  +  +++       +EK
Sbjct: 430 ETVIEIAKKYNIS--LTILYCYAPLKILSDRLSKRQGDISDATPNLLKQQQNNAQDFNEK 487


>gi|116749548|ref|YP_846235.1| cytidylate kinase [Syntrophobacter fumaroxidans MPOB]
 gi|166199009|sp|A0LK48|KCY_SYNFM RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|116698612|gb|ABK17800.1| cytidylate kinase [Syntrophobacter fumaroxidans MPOB]
          Length = 225

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          MN+   I+ +G  GAGK+T   LL + L
Sbjct: 1  MNNATIIAIDGPAGAGKSTVSRLLAKEL 28


>gi|189499384|ref|YP_001958854.1| guanylate kinase [Chlorobium phaeobacteroides BS1]
 gi|189494825|gb|ACE03373.1| Guanylate kinase [Chlorobium phaeobacteroides BS1]
          Length = 191

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 68/219 (31%), Gaps = 36/219 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  I F    G GK+T    +   ++   + V   TR            + L     +
Sbjct: 4   RQGKLIVFSAPSGTGKSTVARKVLERVEGLEFSVSATTRSRREGEVDGKNYYYLTKKAFE 63

Query: 61  EFGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           E        E   F       + +    A+  GK +L D                    L
Sbjct: 64  EIIDSDGFIEYEHFFGNFYGTLLDKTEAAVASGKHMLFD--------------------L 103

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQI 176
           D    +++++  P+ T++L L     L+ ++ R   RES   D   ER      E     
Sbjct: 104 DVKGALNLKKHFPENTLLLFLKP-PSLQELKKRLDGRESEDEDALNERLKRAEFE----- 157

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            L  A          + + +   V      ++ + + K+
Sbjct: 158 -LSFAHQFDHEVVNDNLSRAVDEVTA----LITDFLSKQ 191


>gi|328771433|gb|EGF81473.1| hypothetical protein BATDEDRAFT_19206 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 199

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 9/97 (9%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTR------EPGGTPAAEAARHVLLSCGV 59
           I   G  G+GK+T +  L K F ++  + +  T       E  G     + R VL +   
Sbjct: 11  IVLCGPSGSGKSTLLKRLFKEFPEQFGFSISHTSRKPRPGETDGVDYHFSEREVLKTKIS 70

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           +  G   E+  F+          ++  L +GK ++ D
Sbjct: 71  E--GKFVESAEFSGNIYGTSYQAVQSVLEQGKNVILD 105


>gi|307271249|ref|ZP_07552528.1| hypothetical protein HMPREF9514_00003 [Enterococcus faecalis
           TX0855]
 gi|306511998|gb|EFM80989.1| hypothetical protein HMPREF9514_00003 [Enterococcus faecalis
           TX0855]
          Length = 188

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + L + L+ +              + +  R  +L    DE G 
Sbjct: 28  KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 77  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151


>gi|295107241|emb|CBL04784.1| Predicted glutamine amidotransferase [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 723

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 10/79 (12%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
           GKTT  +LL   L+     V   R   G          LL     ++G      VF    
Sbjct: 62  GKTTVTNLLADALETAGQRVVCNR--TGANLDSGVATALLHAREADWG------VFECDE 113

Query: 76  LDHVENVIRPALMEGKILL 94
           L   +  I P L    ++L
Sbjct: 114 LWLAK--ILPHLQANYVVL 130


>gi|295425799|ref|ZP_06818480.1| deoxyguanosine kinase [Lactobacillus amylolyticus DSM 11664]
 gi|295064492|gb|EFG55419.1| deoxyguanosine kinase [Lactobacillus amylolyticus DSM 11664]
          Length = 228

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 76/228 (33%), Gaps = 43/228 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQ 121
           +  A +     L+   + I+ AL     +L DR +   +  +Q   D  +     +D+  
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKEALTADNNVL-DRSIYEDALFFQMNADIGRATQEEVDTYY 106

Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           E+    + E+       PD  + +++  D  +KR+Q R    E    D         +++
Sbjct: 107 ELLNNMMGELKRMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD---STLEDYYKR 163

Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWEL 211
               +            + +D             + V   I+  +  +
Sbjct: 164 LLSYYKPWYEKYDHSPKMEIDGDKFDFMASEKDREIVLDQIVAKLKSI 211


>gi|300088160|ref|YP_003758682.1| aminoglycoside phosphotransferase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527893|gb|ADJ26361.1| aminoglycoside phosphotransferase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 526

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 76/218 (34%), Gaps = 48/218 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAARHVLLSCG 58
           LFI+  G  G GK+T    L R L  ++    +TR      EPG TPA+ A    L S  
Sbjct: 341 LFIT-SGPTGCGKSTLAGTLTRHLGLRHISSDITRKKLAGIEPG-TPASAAYTEGLYSP- 397

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQH 114
             E            A LD  E V    L  G  ++ D    +  D   A    +  S  
Sbjct: 398 --EMTQRT-----YVAMLDSAEKV----LAGGGSVILDATFLKKTDRDRALGLAKRYSAR 446

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             +   +                L      +R++ R +   +     +      +++++R
Sbjct: 447 PVIIECR----------------LDEAEARQRLERRATEPGNVSDGCW-----AVYQRQR 485

Query: 175 QIFLDIARNQPD--RCHIVDSAHSFQSVATNILNIVWE 210
               +     P+     I+D+ H  +    +I+ I+ E
Sbjct: 486 DS-AEPVEELPEGRNHVIIDTRHDPEEAIRDIIAILIE 522


>gi|241760701|ref|ZP_04758793.1| cell division protein FtsY [Neisseria flavescens SK114]
 gi|241318882|gb|EER55408.1| cell division protein FtsY [Neisseria flavescens SK114]
          Length = 510

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 317 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 371

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 372 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 422

Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159
            MPD      ++LD   +IG   V    +  E+  L
Sbjct: 423 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 456


>gi|228933844|ref|ZP_04096689.1| uridine kinase [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228825800|gb|EEM71588.1| uridine kinase [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
          Length = 157

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 17/88 (19%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183
           D TI +D P+DI + R   R         D+ E     IH          R+ +L+    
Sbjct: 72  DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHYINYARKAYLEALHT 122

Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210
            +P+   ++D A S   +   I   ++ 
Sbjct: 123 VKPNSDIVLDGALSVDQIINQIEEELYR 150


>gi|126460335|ref|YP_001056613.1| GTPase [Pyrobaculum calidifontis JCM 11548]
 gi|126250056|gb|ABO09147.1| protein of unknown function, ATP binding [Pyrobaculum
          calidifontis JCM 11548]
          Length = 249

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M +  FI   G  G+GK+T +S L  +L  + YDV
Sbjct: 1  MYTVFFI---GTAGSGKSTLVSALYNWLDDQGYDV 32


>gi|46907794|ref|YP_014183.1| dephospho-CoA kinase [Listeria monocytogenes str. 4b F2365]
 gi|47093100|ref|ZP_00230877.1| dephospho-CoA kinase [Listeria monocytogenes str. 4b H7858]
 gi|226224164|ref|YP_002758271.1| hypothetical protein Lm4b_01574 [Listeria monocytogenes Clip81459]
 gi|254824378|ref|ZP_05229379.1| dephospho-CoA kinase [Listeria monocytogenes FSL J1-194]
 gi|254931503|ref|ZP_05264862.1| dephospho-CoA kinase [Listeria monocytogenes HPB2262]
 gi|254994375|ref|ZP_05276565.1| hypothetical protein LmonocytoFSL_16390 [Listeria monocytogenes FSL
           J2-064]
 gi|255520155|ref|ZP_05387392.1| hypothetical protein LmonocFSL_02787 [Listeria monocytogenes FSL
           J1-175]
 gi|51315886|sp|Q71ZA4|COAE_LISMF RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|46881063|gb|AAT04360.1| dephospho-CoA kinase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018540|gb|EAL09296.1| dephospho-CoA kinase [Listeria monocytogenes str. 4b H7858]
 gi|225876626|emb|CAS05335.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|293583055|gb|EFF95087.1| dephospho-CoA kinase [Listeria monocytogenes HPB2262]
 gi|293593613|gb|EFG01374.1| dephospho-CoA kinase [Listeria monocytogenes FSL J1-194]
 gi|328465598|gb|EGF36827.1| dephospho-CoA kinase [Listeria monocytogenes 1816]
 gi|328474916|gb|EGF45716.1| dephospho-CoA kinase [Listeria monocytogenes 220]
          Length = 200

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 80/216 (37%), Gaps = 32/216 (14%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60
           G+ G+   GK+T  +++++    L   +       E G     E        +LL+ G  
Sbjct: 6   GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVERGTEGLKEIVAYFGEEILLADGTL 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I     + + +  +  P + +  +   +RF +         +      +  L
Sbjct: 66  NRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFE-------AGEELVFFDIPLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179
            E  ++ ++ D  +++    +  LKR+  R +L +   L   E + + I EK R+  F  
Sbjct: 119 FESHLESLV-DKIVVVWTTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                     ++D+  S +     +L  +   V+ +
Sbjct: 175 ----------VIDNNESLEKTQKQVLTFIKRFVKNK 200


>gi|269961511|ref|ZP_06175874.1| signal recognition particle-docking protein FtsY [Vibrio harveyi
           1DA3]
 gi|269833740|gb|EEZ87836.1| signal recognition particle-docking protein FtsY [Vibrio harveyi
           1DA3]
          Length = 416

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 219 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 274

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 275 TGADSASVIYDAIEAAKARGVDVVIAD 301


>gi|159123809|gb|EDP48928.1| cell cycle checkpoint protein Rad17, putative [Aspergillus
           fumigatus A1163]
          Length = 722

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
             +   G  G+GKTT +SLL   L    +DV   R P G+  A
Sbjct: 133 KLLVLRGPAGSGKTTTLSLLSDKL---GFDVLEWRNPSGSEFA 172


>gi|70982795|ref|XP_746925.1| cell cycle checkpoint protein Rad17 [Aspergillus fumigatus Af293]
 gi|66844550|gb|EAL84887.1| cell cycle checkpoint protein Rad17, putative [Aspergillus
           fumigatus Af293]
          Length = 722

 Score = 39.6 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
             +   G  G+GKTT +SLL   L    +DV   R P G+  A
Sbjct: 133 KLLVLRGPAGSGKTTTLSLLSDKL---GFDVLEWRNPSGSEFA 172


>gi|308068626|ref|YP_003870231.1| Signal recognition particle protein [Paenibacillus polymyxa E681]
 gi|305857905|gb|ADM69693.1| Signal recognition particle protein [Paenibacillus polymyxa E681]
          Length = 458

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L + LQ++N+   +       PAA     VL   ++  V   G +  
Sbjct: 108 GLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQVLGEQINTPVFTLGDQTS 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            +  A   L H ++           ++ D            R       ++ L++I    
Sbjct: 168 PVEIAKQGLQHAKD------NGNDYVIID---------TAGRLHVDEELMEELRQIHTN- 211

Query: 128 VMPDCTII 135
           V PD  ++
Sbjct: 212 VKPDEVLL 219


>gi|302809793|ref|XP_002986589.1| hypothetical protein SELMODRAFT_235054 [Selaginella moellendorffii]
 gi|300145772|gb|EFJ12446.1| hypothetical protein SELMODRAFT_235054 [Selaginella moellendorffii]
          Length = 221

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 70/211 (33%), Gaps = 45/211 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        + VH+        A +  R  + S   +          
Sbjct: 34  GGPGSGKGTQCAKIVEKF---GF-VHL-------SAGDLLRAEINSGSANG--------- 73

Query: 71  FAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQG-ERDSSQHLFLDSLQEISVQ 126
                      +I+  + EGKI+  +   + L  + A  G ++        +     + +
Sbjct: 74  ----------TMIQNMIQEGKIVPSEVTVKLLQKAMAESGKDKFLIDGFPRNQENRAAFE 123

Query: 127 ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180
               + P+  +  D P +    R+  R   R    ++   ++  +  E        +   
Sbjct: 124 AVTGIEPEFILFFDCPQEEMEVRLLGRNQGRSDDNIETIRKRFKVFVESSLPVVDHY--- 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             ++  +   V++A + + V  +I  +  + 
Sbjct: 181 --DKKGKVRKVNAAKTKEEVFESIETLFQKF 209


>gi|262163696|ref|ZP_06031437.1| signal recognition particle receptor protein FtsY [Vibrio mimicus
           VM223]
 gi|262027912|gb|EEY46576.1| signal recognition particle receptor protein FtsY [Vibrio mimicus
           VM223]
          Length = 390

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 193 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 248

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 249 TGADSASVIYDAIEAAKARGIDVVIAD 275


>gi|261210150|ref|ZP_05924447.1| signal recognition particle receptor protein FtsY [Vibrio sp.
           RC341]
 gi|260840690|gb|EEX67239.1| signal recognition particle receptor protein FtsY [Vibrio sp.
           RC341]
          Length = 388

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 191 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 246

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 247 TGADSASVIYDAIEAAKARGIDVVIAD 273


>gi|110643224|ref|YP_670954.1| ATP-binding protein YghS [Escherichia coli 536]
 gi|110344816|gb|ABG71053.1| hypothetical ATP-binding protein YghS [Escherichia coli 536]
          Length = 232

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++     +G +L+ DR+
Sbjct: 72  KAAHVHDKPSTPPGNITALVIYLLSCWRAYKFHKMLCKN-QQGYLLITDRY 121


>gi|21537248|gb|AAM61589.1| adenylylsulfate kinase-like protein [Arabidopsis thaliana]
          Length = 305

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 40/151 (26%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G+ G+GK++    L R L  +                      +L      
Sbjct: 102 HKGCVIWITGLSGSGKSSLACALSRALHNRGK-----------------LSYILDGDNVR 144

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G  ++    A  R +++     V +     G I +    L S Y               
Sbjct: 145 HGLNSDLSFEADDRAENIRRVGEVAKLFADSGIICIA--SLISPY--------------- 187

Query: 119 SLQEISVQEVMP--DCT-IILDLPVDIGLKR 146
            ++  + + ++P  D   + +D+P+ +   R
Sbjct: 188 RIERAACRALLPQGDFIEVFMDVPLHVCEAR 218


>gi|84489410|ref|YP_447642.1| hypothetical protein Msp_0601 [Methanosphaera stadtmanae DSM 3091]
 gi|84372729|gb|ABC56999.1| partially conserved hypothetical protein, predicted GTPase
           [Methanosphaera stadtmanae DSM 3091]
          Length = 550

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 16/131 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+   GI G GKTT I+ +  +L++  Y          T  A A     L    +    
Sbjct: 354 MFV---GINGTGKTTTIAKIATYLEKHGYSSVF--GASDTFRAGAIEQ--LEHHANNLNL 406

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +       +       + +  A   GK ++    +D+S      R  +    +D +++I 
Sbjct: 407 KIIKHERNSDPAAVAFDAVEHAKASGKDVVL---IDTS-----GRMQTNANLMDEMKKI- 457

Query: 125 VQEVMPDCTII 135
            +   PD  I 
Sbjct: 458 KRVSQPDIVIY 468


>gi|107021861|ref|YP_620188.1| adenylylsulfate kinase [Burkholderia cenocepacia AU 1054]
 gi|116688809|ref|YP_834432.1| adenylyl-sulfate kinase [Burkholderia cenocepacia HI2424]
 gi|105892050|gb|ABF75215.1| adenylylsulfate kinase [Burkholderia cenocepacia AU 1054]
 gi|116646898|gb|ABK07539.1| adenylylsulfate kinase [Burkholderia cenocepacia HI2424]
          Length = 187

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 21/93 (22%)

Query: 6  FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          F+    G+ GAGK+T  +LLK  L  +                   R  LL   +   G 
Sbjct: 18 FVVWLTGVSGAGKSTLSNLLKDQLDARG-----------------LRTFLLDGDLLREGL 60

Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILL 94
            +     A R +++     V R  +  G +++
Sbjct: 61 NQDLGFSDADRHENIRRTAEVARLMVEAGLVVI 93


>gi|195012061|ref|XP_001983455.1| GH15906 [Drosophila grimshawi]
 gi|193896937|gb|EDV95803.1| GH15906 [Drosophila grimshawi]
          Length = 229

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 38/197 (19%)

Query: 11  GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVL------LSCGVDEF 62
           G  G+GK+T +  L   F +   + V H TR P          + +      L+   DEF
Sbjct: 40  GPSGSGKSTLLKRLFAEFPEMFGFSVSHTTRRPRDGEEHGIHYYFVSRPDMELAIANDEF 99

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE   F+       +  +R    +G++ + D           E+   + +    L  
Sbjct: 100 IETAE---FSGNMYGTSKEAVRDIQSKGRVCILD----------IEQKGVEQIRRTDLNP 146

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM---------IHEKR 173
           I +    P         ++   +R++ R +  E +         +           H+  
Sbjct: 147 ILIYNNPP--------SIEELEQRLRKRGTETEESLRKRLNAAKMEIDYGLMPGNFHKIV 198

Query: 174 RQIFLDIARNQPDRCHI 190
               +D+A  +     +
Sbjct: 199 HNEDIDVAYEEFRNFVV 215


>gi|167628918|ref|YP_001679417.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase
           [Heliobacterium modesticaldum Ice1]
 gi|167591658|gb|ABZ83406.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase
           [Heliobacterium modesticaldum Ice1]
          Length = 624

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +LL++ L  +    +                 +L       G   + 
Sbjct: 462 FTGLSGSGKSTLANLLEKRLFAEGKHTY-----------------ILDGDNVRHGLNRDL 504

Query: 69  IVFAAARLD---HVENVIRPALMEGKILL 94
               A R++    V  V +  +  G I+L
Sbjct: 505 GFTEADRVENIRRVAEVAKLMVDAGLIVL 533


>gi|154316853|ref|XP_001557747.1| hypothetical protein BC1G_03844 [Botryotinia fuckeliana B05.10]
 gi|150845456|gb|EDN20649.1| hypothetical protein BC1G_03844 [Botryotinia fuckeliana B05.10]
          Length = 216

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 29/175 (16%)

Query: 7   ISFEGIEGAGKTTH-ISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62
           I   G  G GK T    LL          + H TR P      +   + +     +    
Sbjct: 11  IIISGPSGVGKGTLYSRLLANHPSLFTTSISHTTRAPRPGEQRDVDYYYVSMEEFEAMIA 70

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   E   F   R      +I     EGKI++ D                +   +  + 
Sbjct: 71  AGDFVEHAKFGGNRYGTSRKMIEQKRGEGKIVVLD---------------IEMEGVKQIH 115

Query: 122 EISVQEVMPDCTIIL------DLPV-DIGLKRVQNRYSLRESACLDYFERKDVMI 169
            +S     P   + +      DL    +  KR++ R + +E +     E+  + +
Sbjct: 116 SLS--PPFPARYVFISPPSTADLSPYQVLEKRLRGRGTEKEESIQKRLEQAKLEL 168


>gi|51598897|ref|YP_073085.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia garinii PBi]
 gi|219684382|ref|ZP_03539326.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia garinii PBr]
 gi|219685717|ref|ZP_03540530.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia garinii Far04]
 gi|81825619|sp|Q660M8|POTA_BORGA RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|51573468|gb|AAU07493.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia garinii PBi]
 gi|219672371|gb|EED29424.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia garinii PBr]
 gi|219672767|gb|EED29793.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia garinii Far04]
          Length = 347

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          FI+  G  G GKTT I +L  FL +KN +++   
Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFS 68


>gi|78484939|ref|YP_390864.1| dephospho-CoA kinase [Thiomicrospira crunogena XCL-2]
 gi|109825034|sp|Q31I33|COAE_THICR RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|78363225|gb|ABB41190.1| Dephospho-CoA kinase [Thiomicrospira crunogena XCL-2]
          Length = 197

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 41/212 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKN----------YDVHVTREPGGTPAAEAARHVLLSCGVD 60
           GI G+GKTT    +++  + +            +V    +PG            L+ G  
Sbjct: 9   GI-GSGKTT----VRQLFEDEGVPTLDADQIAREVVAKNQPGLAEIERTFGSDYLTNGEL 63

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I   A+    +E ++ P + +           +    Q  +       +  +
Sbjct: 64  NRAKLRELIFNDASAKQALEAILHPLIRQ----------RTEQLIQQLKKQHPPAIVVEI 113

Query: 121 QEISVQEVMPDCT---IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             +  +   P+     I+LDL  +  LKR   R  L           + ++  +  R   
Sbjct: 114 -PLLTETGKPNYVDEVIVLDLAPETQLKRAITRDQLPAEDI------QKIIQQQATRAER 166

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           L +A        I+++    +++  +I +++ 
Sbjct: 167 LAVAD------IILNTEQPLETLRKDIQSLLH 192


>gi|125983166|ref|XP_001355348.1| GA17539 [Drosophila pseudoobscura pseudoobscura]
 gi|195169459|ref|XP_002025539.1| GL15252 [Drosophila persimilis]
 gi|54643662|gb|EAL32405.1| GA17539 [Drosophila pseudoobscura pseudoobscura]
 gi|194109018|gb|EDW31061.1| GL15252 [Drosophila persimilis]
          Length = 299

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 11/90 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          +   G+  +GK+T    L+  L      V++  E    P A   ++        E     
Sbjct: 4  VVITGLPASGKSTRARQLQEHLAGLGKKVYLISENEAVPKALFEKNSFFGDSQKEK---- 59

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96
                  R D     +R  L +  +++ D
Sbjct: 60 ------VVRSDLKSEALRH-LNKEDVVILD 82


>gi|323340086|ref|ZP_08080351.1| multidrug ABC superfamily ATP binding cassette transporter, ABC
           protein [Lactobacillus ruminis ATCC 25644]
 gi|323092463|gb|EFZ35070.1| multidrug ABC superfamily ATP binding cassette transporter, ABC
           protein [Lactobacillus ruminis ATCC 25644]
          Length = 618

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/31 (48%), Positives = 20/31 (64%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
           N G  ++  G  GAGKTT I+LL+RF + K 
Sbjct: 393 NPGKMVAIVGPTGAGKTTLINLLERFYEIKG 423


>gi|126732967|ref|ZP_01748728.1| hypothetical protein SSE37_17750 [Sagittula stellata E-37]
 gi|126706584|gb|EBA05660.1| hypothetical protein SSE37_17750 [Sagittula stellata E-37]
          Length = 500

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 20/109 (18%)

Query: 125 VQEVMPD--CTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK------RRQ 175
                PD     ++ D+  +I L R          + LD F+   V +  +         
Sbjct: 343 TGRPHPDGAVAFLIEDISAEISLTRRFRSELEMTQSVLDRFDDA-VAVFSRLGVLTFTNA 401

Query: 176 IFLDIARNQPDR----CHIVDSAHS------FQSVATNILNIVWELVQK 214
            + +     PD       IVD+            + + I   V  L ++
Sbjct: 402 AYRERWNCDPDSAFAEITIVDATKDWSSGCLPSPIWSEIREFVLTLRER 450


>gi|329114197|ref|ZP_08242959.1| Adenylate kinase [Acetobacter pomorum DM001]
 gi|326696273|gb|EGE47952.1| Adenylate kinase [Acetobacter pomorum DM001]
          Length = 222

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 53/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I F G  GAGK T   LL+     +Q    D+       G+   + A+ ++      +  
Sbjct: 3   IIFLGPPGAGKGTQSKLLEERYGLIQISTGDMLRAEVAKGSETGKQAKALM---DAGKLV 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   I    +R      + +     G   + D F          R  +Q   LD +  +
Sbjct: 60  PDELIIAMLKSR------IAQADCQNGF--ILDGF---------PRTLAQAEELDGM--L 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----------CLD---------YFER 164
           S      D  + LD+  +I   R+  R++                +D          F+R
Sbjct: 101 SSDGKKIDTVLFLDVDEEILADRISGRFTCGNCGKTYNEVSNPPKVDGVCDSCGSHEFKR 160

Query: 165 KDVMIHEKRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208
           +     E   +    +  +         +  R H ++   S   V   I + +
Sbjct: 161 RADDKRETVVERLKEYRKLTAPILPFYEKTGRLHKINGMLSAPEVTGEIEDAL 213


>gi|320582191|gb|EFW96409.1| Signal recognition particle (SRP) receptor-alpha subunit [Pichia
           angusta DL-1]
          Length = 550

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 21/137 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65
           IS  G+ G GK+T++S L  +L + NY V +T     T  + A   +        +   +
Sbjct: 343 ISVVGVNGVGKSTNLSKLAYWLLQNNYRVLITA--CDTFRSGAVEQLRTHVNNLTKLSPD 400

Query: 66  A-EAIVFAAAR--LDHVENV----IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFL 117
             +  +F       D V  +    I+ A      I+L D            R  +    +
Sbjct: 401 QKQIELFEGGYGGADLVAKIATGAIKYAKQNNFDIVLLD---------TAGRRHNDTQLM 451

Query: 118 DSLQEISVQEVMPDCTI 134
             L   +     PD  I
Sbjct: 452 APLASFAKAA-NPDKII 467


>gi|148974243|ref|ZP_01811776.1| hypothetical protein VSWAT3_13987 [Vibrionales bacterium SWAT-3]
 gi|145965940|gb|EDK31188.1| hypothetical protein VSWAT3_13987 [Vibrionales bacterium SWAT-3]
          Length = 180

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 35/181 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+     F G  G+GKT+ I      L+ + Y              E  R V+      
Sbjct: 1   MNN--LTVFTGGPGSGKTSVI----DALKSQGYRCAP----------EVGRKVIQHQVSQ 44

Query: 61  EFGAEAEAIVFAAARLDHVENVI---RPALMEGKILLCDRFLDSSYAYQGERDS-SQHLF 116
           +  A        A R + V   +   +      +++  DR +  SY Y            
Sbjct: 45  QGSALPWLDK-VAFRDEMVREELANYQAFEASEQLVFFDRSIVDSYGYSLLETLPIPECL 103

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L+S  E++          I   P           +   +    D FE + +  +EK  + 
Sbjct: 104 LNSCNELAYNA----KVFIF--PPWE------EIFINDQERKQD-FE-EALATYEKMVEA 149

Query: 177 F 177
           +
Sbjct: 150 Y 150


>gi|15611628|ref|NP_223279.1| adenylate kinase [Helicobacter pylori J99]
 gi|8134509|sp|Q9ZLL8|KAD_HELPJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|4155112|gb|AAD06144.1| ADENYLATE KINASE [Helicobacter pylori J99]
          Length = 191

 Score = 39.6 bits (92), Expect = 0.29,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D     + + H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +              I++   S + +   +   +   
Sbjct: 151 DPLVEIQNFYKAKHLHKIINGERSIEEIVNEMQKYILSF 189


>gi|295100412|emb|CBK97957.1| cobalamin biosynthesis protein CbiD [Faecalibacterium prausnitzii
           L2-6]
          Length = 645

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 1/73 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE 61
            G  ++  G  GAGK+T +  L   L  +   V +  ++       E AR + L      
Sbjct: 32  KGTILTLIGPNGAGKSTLLKTLAAQLAPQGGAVLLDGKDLADCSGTERARKMALMVPHTR 91

Query: 62  FGAEAEAIVFAAA 74
                     A+A
Sbjct: 92  RTELTTCFEMASA 104


>gi|285019058|ref|YP_003376769.1| sulfate adenylyltransferase, ATP sulfurylase [Xanthomonas
           albilineans GPE PC73]
 gi|283474276|emb|CBA16777.1| putative sulfate adenylyltransferase, atp sulfurylase protein
           [Xanthomonas albilineans]
          Length = 638

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  +                      LL       G   + 
Sbjct: 473 FTGLSGAGKSTIANLVEKRLHAQGRHTF-----------------LLDGDNVRHGLNRDL 515

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R  +  G I+L         ++     + + +        + 
Sbjct: 516 GFTDEDRVENIRRVAEVARLMIDAGLIVL--------VSFISPFRAEREMARA---RFAP 564

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E +    + +D+P+ +   R
Sbjct: 565 GEFVE---VFVDVPLQVAEAR 582


>gi|300770707|ref|ZP_07080586.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300763183|gb|EFK60000.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 190

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 31/170 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  I F    GAGKTT +  L      K        TREP G        + +      
Sbjct: 2   KGKLIIFSAPSGAGKTTIVRHLLNKYPDKIEFSISASTREPRGEEVDGKDYYFISKDEFL 61

Query: 61  EFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              A+ E I    V++      + + +     +GK ++ D                    
Sbjct: 62  HKIAKQEFIEFEEVYSGTFYGTLRSEVERIWEKGKHVIFD-------------------- 101

Query: 117 LDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           +D +  + ++   PD   +I +  P   ++   R++ R +  E    + F
Sbjct: 102 IDVVGGLRLRSKFPDQALSIFVQ-PPSLEVLKDRLRGRGTDSEDKLKERF 150


>gi|255070079|ref|XP_002507121.1| deoxynucleoside kinase family [Micromonas sp. RCC299]
 gi|226522396|gb|ACO68379.1| deoxynucleoside kinase family [Micromonas sp. RCC299]
          Length = 446

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 39/177 (22%)

Query: 9   FEGIEGAGKTTHISLLKR---FLQRKNYDVHV--------TREPGGTPAAEAARHVL--- 54
            EG  GAGK+T +S + +    L+     + +         R  G   +A  A ++L   
Sbjct: 148 VEGNIGAGKSTFLSSIIKGSTLLEDLGTSIVLEPVEKWQQVRNRGEQVSAFEAHNILNEF 207

Query: 55  -LSCGVDEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ 106
             +     +  +        ++ A  R   V  + R        +L DR  F++S Y   
Sbjct: 208 YKNPTRFAYTFQHHVFMTRLLLEAETRSGSVRIMERS-------ILSDRMIFVESVY--- 257

Query: 107 GERDSSQHLFLDSLQEI------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            E+     L                  ++PD  I L    ++ LKR++ R    E+ 
Sbjct: 258 -EKGWLSDLEFSLFNSWYEPVVKVSPHLIPDAFIYLRTTPEVCLKRLKRRARGEETE 313


>gi|1170606|sp|P43188|KADC_MAIZE RecName: Full=Adenylate kinase, chloroplastic; Short=AK; AltName:
           Full=ATP-AMP transphosphorylase
 gi|3114421|pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor
           P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
 gi|3114422|pdb|1ZAK|B Chain B, Adenylate Kinase From Maize In Complex With The Inhibitor
           P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
          Length = 222

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 63/238 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
             G   +GK T   L+K   Q  +               +  R  + +   +   A+   
Sbjct: 10  ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 56

Query: 69  IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 +   V + I          +P   E    L D +  S          SQ + L+
Sbjct: 57  ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 103

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164
           +L+      + PD  I+LD+P ++ ++RV  R                           +
Sbjct: 104 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 157

Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           +     EK         Q    +     +    V    +  +V   I  ++  +++K+
Sbjct: 158 RFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 215


>gi|315282486|ref|ZP_07870890.1| dephospho-CoA kinase [Listeria marthii FSL S4-120]
 gi|313613870|gb|EFR87610.1| dephospho-CoA kinase [Listeria marthii FSL S4-120]
          Length = 200

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 81/216 (37%), Gaps = 32/216 (14%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60
           G+ G+   GK+T  +++++    L   +       EPG    AE        +LL+ G  
Sbjct: 6   GLTGSVATGKSTVSNMIQQAGIPLVDADVAARKVVEPGTDGLAEIVAYFGEEILLADGTL 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                A  I    A+ + +  +  P + +   +L +R       Y    +      +  L
Sbjct: 66  NRPKLAGIIFKDKAKREKLNEITHPRVKD--YMLSER-----ERYFEAGEEIVFFDIPLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179
            E  ++ ++ D  +++    +  L R+  R  L +   L     + + I EK R+  F  
Sbjct: 119 FESHLESLV-DQIVVVWTTPETELNRLMERNDLTKEDALARINSQ-MGIDEKARKADF-- 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                     ++D+  S ++    +L  +   V+ +
Sbjct: 175 ----------VIDNNTSLENTQKQVLTFIERFVKNK 200


>gi|298250431|ref|ZP_06974235.1| ABC transporter related protein [Ktedonobacter racemifer DSM
          44963]
 gi|297548435|gb|EFH82302.1| ABC transporter related protein [Ktedonobacter racemifer DSM
          44963]
          Length = 458

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
          + +G FI+  G  G+GK+T + +L   L   + +V     P   P
Sbjct: 43 IRAGEFIALLGPSGSGKSTLLRILAGLLNPSSGEVLFKGVPQYGP 87


>gi|261839555|gb|ACX99320.1| adenylate kinase [Helicobacter pylori 52]
          Length = 191

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+  +  LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTKRGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   +  I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSTQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V +     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189


>gi|282599235|ref|YP_003358547.1| hypothetical protein [Shigella phage phiSboM-AG3]
 gi|226973541|gb|ACO94294.1| conserved hypothetical phage protein [Shigella phage phiSboM-AG3]
          Length = 220

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 37/173 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK+T  S L     +         + +T  P              S GVD     
Sbjct: 37  GSNGSGKSTVPSQLAERDPQAYVVTHDGKIMLTVCPSFNVVCIGKYDKSKSKGVDSLKD- 95

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++FA +  D  E  +   + EG I        S+                 L     
Sbjct: 96  TEQMLFALSIADLPEYQVYDVIFEGII-------PSTL----------------LSSWIP 132

Query: 126 QEVMP--DCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +   P  +  ++  D P++  + RV++R     +   D+ E   V   E+ + 
Sbjct: 133 RLTRPPRELVVLFMDTPLETCIARVKSR-----NGGADFNESLVVEKWERVQD 180


>gi|55959191|emb|CAI15061.1| guanylate kinase 1 [Homo sapiens]
          Length = 218

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 22  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 68

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G D +    E +     R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 69  ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYF 162
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +   
Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRL 170


>gi|55959194|emb|CAI15064.1| guanylate kinase 1 [Homo sapiens]
          Length = 253

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 67  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 113

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G D +    E +     R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 114 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 164

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYF 162
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +   
Sbjct: 165 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRL 215


>gi|156972913|ref|YP_001443820.1| ATPase [Vibrio harveyi ATCC BAA-1116]
 gi|156524507|gb|ABU69593.1| hypothetical protein VIBHAR_00591 [Vibrio harveyi ATCC BAA-1116]
          Length = 196

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 23/109 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDE 61
           I   G  GAGKTT ++ L               E G    AE +R ++     L  GV  
Sbjct: 16  IVITGGPGAGKTTLLNALG--------------ELGYATFAEGSRTLIEQQSQLDNGVLP 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +    E   FA   L+ +    + AL   +++  DR +    AY     
Sbjct: 62  WTNLPE---FANLCLELMGKQKQDAL-SHEVVFVDRAIPDIVAYLKVGG 106


>gi|52142234|ref|YP_084595.1| cobalt ABC transporter ATP-binding protein [Bacillus cereus E33L]
 gi|51975703|gb|AAU17253.1| ABC transporter, ATP-binding protein; possible cobalt transport
           ATP-binding protein [Bacillus cereus E33L]
          Length = 553

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 12/89 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGV 59
           +  G FI+  G  G+GKTT +   K+ L            P GT + E     VLL    
Sbjct: 31  IQKGEFITLAGGSGSGKTTLLKHFKKELL-----------PIGTRSGEIFYDDVLLEEVP 79

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALM 88
           D   A+   +VF       V + +   L 
Sbjct: 80  DLLSAQEIGMVFQNPENQLVMDTVIQELA 108


>gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301]
 gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942]
 gi|81596488|sp|Q5N4D3|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK
 gi|116257513|sp|Q31PU5|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK
 gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301]
 gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942]
          Length = 190

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 48/212 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LF+   G+ G+GKTT   LL   L    Y    T          +   +  S G      
Sbjct: 12  LFLV--GLMGSGKTTIGKLLAESL---GYTYVDTDSLIENVTGRSIPEIFASDGE----- 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                   A        V+       ++++            G     +      LQ+  
Sbjct: 62  --------AGFRQIETQVLEEVASYRRLVVAT----------GGGIVIRPENWSYLQQG- 102

Query: 125 VQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                    I LD+P+   L+R+   QNR  L+  A     +     + E+RR  +    
Sbjct: 103 -------LVIWLDVPIPELLRRLEGDQNRPLLQTEAPATTLQ----ALWEQRRDRY---- 147

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
                R   ++++   +     IL ++  +++
Sbjct: 148 AQADLRIA-IEASEDPEVTMQRILEVIPSVLK 178


>gi|327483045|gb|AEA77452.1| Signal recognition particle receptor protein FtsY [Vibrio cholerae
           LMA3894-4]
          Length = 390

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 193 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 248

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 249 TGADSASVIYDAIEAAKARGIDVVIAD 275


>gi|303241509|ref|ZP_07328010.1| signal recognition particle protein [Acetivibrio cellulolyticus
           CD2]
 gi|302590927|gb|EFL60674.1| signal recognition particle protein [Acetivibrio cellulolyticus
           CD2]
          Length = 450

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 20/153 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++G+GKTT    L   L+++  +  +       PAA     V+   L   V   G +  
Sbjct: 108 GLQGSGKTTTSGKLANLLRKQGKNPLLVACDVYRPAAIKQLQVVGGQLGVDVFSMGDQTN 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            +  A A ++H +      + +  +++ D            R       +D L+ I    
Sbjct: 168 PVDIAKAAVEHAK------IKQYDLVIID---------TAGRLHIDEKLMDELKNI-KDT 211

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           V P   I+L +    G   V    +  E   +D
Sbjct: 212 VRPH-EILLVVDSMTGQDAVNVSETFNEKLGVD 243


>gi|262172903|ref|ZP_06040581.1| signal recognition particle receptor protein FtsY [Vibrio mimicus
           MB-451]
 gi|261893979|gb|EEY39965.1| signal recognition particle receptor protein FtsY [Vibrio mimicus
           MB-451]
          Length = 392

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 195 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 250

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 251 TGADSASVIYDAIEAAKARGIDVVIAD 277


>gi|258625089|ref|ZP_05720008.1| signal recognition particle-docking protein FtsY [Vibrio mimicus
           VM603]
 gi|258582640|gb|EEW07470.1| signal recognition particle-docking protein FtsY [Vibrio mimicus
           VM603]
          Length = 400

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 203 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 258

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 259 TGADSASVIYDAIEAAKARGIDVVIAD 285


>gi|210622384|ref|ZP_03293137.1| hypothetical protein CLOHIR_01085 [Clostridium hiranonis DSM 13275]
 gi|210154266|gb|EEA85272.1| hypothetical protein CLOHIR_01085 [Clostridium hiranonis DSM 13275]
          Length = 207

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 42/216 (19%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           MN  G+     G  GAGK T    L +  +     V   TR P      E   +   +  
Sbjct: 1   MNRKGILTVVSGPSGAGKGTICKELLKNNENIKLSVSATTRAPREGE-KEGVNYYYKTHE 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             +   E   +   A R  +        I   L +G+ +L                    
Sbjct: 60  EFKKMIEEGDLFEYAERYGNFYGTPKAAIMENLEKGQDVL-------------------- 99

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L ++ +  ++V+++ PD  +I  LP   +   +R+  R +  E      F          
Sbjct: 100 LEIEMIGALNVKKMCPDSVLIFVLPPSLEELKRRLVGRGTETEEQIEKRFSM-------- 151

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
               + +I   +     I++     ++ A +I +I+
Sbjct: 152 ---AYEEIQTLKEYDYFIIN--EDVETAAKDIESII 182


>gi|171184673|ref|YP_001793592.1| ABC transporter related [Thermoproteus neutrophilus V24Sta]
 gi|170933885|gb|ACB39146.1| ABC transporter related [Thermoproteus neutrophilus V24Sta]
          Length = 244

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G F++  G  G GK+T + +L   L+R +  V   R   G P  E  R + L       
Sbjct: 28 KGEFVALLGPSGCGKSTLLRMLAG-LERPDAGVVKFR---GEPIREPRREIALMFQFPNL 83

Query: 63 GAEAEAI 69
               A+
Sbjct: 84 LPWKTAL 90


>gi|153824163|ref|ZP_01976830.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           B33]
 gi|126518315|gb|EAZ75540.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           B33]
          Length = 303

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 106 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 161

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 162 TGADSASVIYDAIEAAKARGIDVVIAD 188


>gi|254226613|ref|ZP_04920194.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           V51]
 gi|125620885|gb|EAZ49238.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           V51]
          Length = 393

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 196 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 251

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 252 TGADSASVIYDAIEAAKARGMDVVIAD 278


>gi|317500461|ref|ZP_07958685.1| guanylate kinase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089438|ref|ZP_08338337.1| guanylate kinase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898216|gb|EFV20263.1| guanylate kinase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330404806|gb|EGG84344.1| guanylate kinase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 211

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 28/171 (16%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSC 57
           MN  G+ I   G  G+GK T +  L               TR+P            +   
Sbjct: 1   MNRKGILIVVSGFSGSGKGTLMKELLSRYPDTYALSVSATTRQPRDGEQDGREYFFISKD 60

Query: 58  GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             ++  A+ E I +A    ++    +  +R  L  GK ++ +         QG     + 
Sbjct: 61  EFEKMIAKDELIEYARYVKNYYGTPKEYVRKQLDAGKDVILE------IEIQGALKVKEE 114

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                          PD  ++   P   G   ++ R   R +  +D  E +
Sbjct: 115 F--------------PDTLLLFVTPPSAGE--LKKRLVGRGTETMDVIESR 149


>gi|258622824|ref|ZP_05717841.1| signal recognition particle-docking protein FtsY [Vibrio mimicus
           VM573]
 gi|258584885|gb|EEW09617.1| signal recognition particle-docking protein FtsY [Vibrio mimicus
           VM573]
          Length = 398

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 201 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 256

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 257 TGADSASVIYDAIEAAKARGIDVVIAD 283


>gi|119484048|ref|XP_001261927.1| cell cycle checkpoint protein rad17 [Neosartorya fischeri NRRL 181]
 gi|119410083|gb|EAW20030.1| cell cycle checkpoint protein rad17 [Neosartorya fischeri NRRL 181]
          Length = 858

 Score = 39.6 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
             +   G  G+GKTT +SLL   L    +DV   R P G+  A
Sbjct: 271 KLLVLRGPAGSGKTTTLSLLSDKL---GFDVLEWRNPSGSEFA 310


>gi|315646173|ref|ZP_07899293.1| guanylate kinase [Paenibacillus vortex V453]
 gi|315278372|gb|EFU41688.1| guanylate kinase [Paenibacillus vortex V453]
          Length = 190

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M+ GL I   G  G GK T  + L+  +    Y V  T
Sbjct: 1  MSKGLLIVLSGPSGVGKGTVCTALRSRVPELVYSVSAT 38


>gi|302385376|ref|YP_003821198.1| protein of unknown function DUF344 [Clostridium saccharolyticum
          WM1]
 gi|302196004|gb|ADL03575.1| protein of unknown function DUF344 [Clostridium saccharolyticum
          WM1]
          Length = 499

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          I FEG+  +GK T I+ L + L  + +DV+
Sbjct: 43 IVFEGMGASGKGTQINRLIQALDPRGFDVY 72



 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
           FEG + AGK   I  L   L  + Y V+ T  P  
Sbjct: 303 FEGWDAAGKGGAIKRLTSHLDPRGYKVYPTSAPND 337


>gi|295402716|ref|ZP_06812658.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294975247|gb|EFG50883.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 222

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 67/226 (29%), Gaps = 46/226 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L  +            T   +   +  L     +F   +
Sbjct: 15  ITIAGTVGVGKSTMTKALAKALNFR------------TSLEKVDTNPYLDKFYADFERWS 62

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123
             +   F A R        +     G   + DR +    A+   +   ++  + ++  E 
Sbjct: 63  FHLQIYFLAERF----KEQKRMFEYGGGFVQDRSIYED-AHIFAKMHFENGTMTAVDYET 117

Query: 124 SVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
                           PD  I L+   +  +KR++ R    E        +  V   ++ 
Sbjct: 118 YTSLFQAMVMTPYFPHPDLLIYLEGSFEEVIKRIRERGRPMEQ-------KTPVSYWKEM 170

Query: 174 RQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWE 210
            + +                 +   I++   S + +      I+ E
Sbjct: 171 YERYEKWINEFNACPVLRVNINEYDIIEDEQSIEPIIKKAATIIHE 216


>gi|262404882|ref|ZP_06081436.1| signal recognition particle receptor protein FtsY [Vibrio sp.
           RC586]
 gi|262348966|gb|EEY98105.1| signal recognition particle receptor protein FtsY [Vibrio sp.
           RC586]
          Length = 399

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 202 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 257

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 258 TGADSASVIYDAIEAAKARGIDVVIAD 284


>gi|229515823|ref|ZP_04405281.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           TMA 21]
 gi|229347086|gb|EEO12047.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           TMA 21]
          Length = 391

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 194 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 249

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 250 TGADSASVIYDAIEAAKARGIDVVIAD 276


>gi|229520064|ref|ZP_04409492.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           TM 11079-80]
 gi|229342852|gb|EEO07842.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           TM 11079-80]
          Length = 395

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 198 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 253

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 254 TGADSASVIYDAIEAAKARGIDVVIAD 280


>gi|229525040|ref|ZP_04414445.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           bv. albensis VL426]
 gi|229338621|gb|EEO03638.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           bv. albensis VL426]
          Length = 401

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 204 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 259

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 260 TGADSASVIYDAIEAAKARGIDVVIAD 286


>gi|261405794|ref|YP_003242035.1| guanylate kinase [Paenibacillus sp. Y412MC10]
 gi|329926588|ref|ZP_08281001.1| guanylate kinase [Paenibacillus sp. HGF5]
 gi|261282257|gb|ACX64228.1| guanylate kinase [Paenibacillus sp. Y412MC10]
 gi|328939129|gb|EGG35492.1| guanylate kinase [Paenibacillus sp. HGF5]
          Length = 190

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 17/38 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M+ GL I   G  G GK T  + L+  +    Y V  T
Sbjct: 1  MSKGLLIVLSGPSGVGKGTVCTALRSRVPELVYSVSAT 38


>gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424]
 gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424]
          Length = 184

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 48/219 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVD 60
            GL I   G+ G GKTT    L   L  + +D  V + +        +  + +  + G D
Sbjct: 6   KGLSIFLVGLPGTGKTTVGQGLAEQLDYRFFDSDVVIKK-----VTGQTIKEIFATQGED 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F              +    V+R             +  S  A      +   + L  +
Sbjct: 61  FF-------------RELESQVLRELCA---------YTRSVIA------TGGGIILKQI 92

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFE-RKDVMIHEKRR 174
               ++       I LD PVD+ ++R+ +  +  +         D  E R+ +     +R
Sbjct: 93  NWSYLRHG---LIIWLDAPVDLLIQRLADDSNRDDPNRPLLQVDDLDELRQKLEFLLSQR 149

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           Q    +      R   + S  +   + + I+  +  ++ 
Sbjct: 150 Q---SLYAEADLRIA-ITSEQTPDDIVSQIVTQIPTVLN 184


>gi|169158656|emb|CAQ14201.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Danio
           rerio]
          Length = 340

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 71/250 (28%), Gaps = 47/250 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------------ 52
             IS +G   +GK      L   L      +    EP      +  +             
Sbjct: 58  KIISIDGNLASGKGVLAQELAEKL-----GMLYMPEPDTHYVDKMTKEKVPLDQAFNGNC 112

Query: 53  ----VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105
                 L     +  +          RL    + +   L  G+ ++ +R   S   +   
Sbjct: 113 SLEKFYLEPKASDGNSYRLQAWMYLMRLLQYSDAVEHLLTTGQGVILERSPFSDVVFLEA 172

Query: 106 QGERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
             +    +   ++   EI      + + P   I +D P +   K+++            Y
Sbjct: 173 MFKEGYIRKQCVNHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKASGKP-------Y 225

Query: 162 FERKDVMIHEKRRQIFLDI----ARNQPD--RCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +   +   +     +          + +      V++    + V  +I     E ++ +
Sbjct: 226 LQNVPLSYLKSIETAYKKTFLPKISEEAEVLTYGAVEA-QDVEKVVEDI-----ECLKFQ 279

Query: 216 VSPLSSKKDI 225
             P  ++ D+
Sbjct: 280 KGPWVNQNDV 289


>gi|153803614|ref|ZP_01958200.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           MZO-3]
 gi|124120853|gb|EAY39596.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           MZO-3]
          Length = 391

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 194 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 249

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 250 TGADSASVIYDAIEAAKARGIDVVIAD 276


>gi|48734808|gb|AAH71334.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Danio
           rerio]
          Length = 355

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 71/250 (28%), Gaps = 47/250 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------------ 52
             IS +G   +GK      L   L      +    EP      +  +             
Sbjct: 58  KIISIDGNLASGKGVLAQELAEKL-----GMLYMPEPDTHYVDKMTKEKVPLDQAFNGNC 112

Query: 53  ----VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105
                 L     +  +          RL    + +   L  G+ ++ +R   S   +   
Sbjct: 113 SLEKFYLEPKASDGNSYRLQAWMYLMRLLQYSDAVEHLLTTGQGVILERSPFSDVVFLEA 172

Query: 106 QGERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
             +    +   ++   EI      + + P   I +D P +   K+++            Y
Sbjct: 173 MFKEGYIRKQCVNHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKASGKP-------Y 225

Query: 162 FERKDVMIHEKRRQIFLDI----ARNQPD--RCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +   +   +     +          + +      V++    + V  +I     E ++ +
Sbjct: 226 LQNVPLSYLKSIETAYKKTFLPKISEEAEVLTYGAVEA-QDVEKVVEDI-----ECLKFQ 279

Query: 216 VSPLSSKKDI 225
             P  ++ D+
Sbjct: 280 KGPWVNQNDV 289


>gi|41152448|ref|NP_955872.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
           mitochondrial [Danio rerio]
 gi|37589758|gb|AAH59660.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Danio
           rerio]
          Length = 355

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 71/250 (28%), Gaps = 47/250 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------------ 52
             IS +G   +GK      L   L      +    EP      +  +             
Sbjct: 58  KIISIDGNLASGKGVLAQELAEKL-----GMLYMPEPDTHYVDKMTKEKVPLDQAFNGNC 112

Query: 53  ----VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105
                 L     +  +          RL    + +   L  G+ ++ +R   S   +   
Sbjct: 113 SLEKFYLEPKASDGNSYRLQAWMYLMRLLQYSDAVEHLLTTGQGVILERSPFSDVVFLEA 172

Query: 106 QGERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
             +    +   ++   EI      + + P   I +D P +   K+++            Y
Sbjct: 173 MFKEGYIRKQCVNHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKASGKP-------Y 225

Query: 162 FERKDVMIHEKRRQIFLDI----ARNQPD--RCHIVDSAHSFQSVATNILNIVWELVQKR 215
            +   +   +     +          + +      V++    + V  +I     E ++ +
Sbjct: 226 LQNVPLSYLKSIETAYKKTFLPKISEEAEVLTYGAVEA-QDVEKVVEDI-----ECLKFQ 279

Query: 216 VSPLSSKKDI 225
             P  ++ D+
Sbjct: 280 KGPWVNQNDV 289


>gi|330508423|ref|YP_004384851.1| signal recognition particle-docking protein FtsY [Methanosaeta
           concilii GP-6]
 gi|328929231|gb|AEB69033.1| signal recognition particle-docking protein FtsY [Methanosaeta
           concilii GP-6]
          Length = 388

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 15/132 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ + ++L  ++Y V +    G T  A A     L    +  G + 
Sbjct: 192 ILFVGVNGTGKTTSIAKVAKYLMDQSYSVVLAA--GDTFRAGAIEQ--LEVHGNNLGLKV 247

Query: 67  EAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + + I  A    K ++L D            R  +    +D +++I  
Sbjct: 248 VKHKTGGDPAAVIFDAIEYARAHNKDVVLAD---------TAGRLHTNINLMDQMRKIV- 297

Query: 126 QEVMPDCTIILD 137
           +   PD  I +D
Sbjct: 298 RVTTPDLLIFVD 309


>gi|327441088|dbj|BAK17453.1| signal recognition particle GTPase [Solibacillus silvestris
           StLB046]
          Length = 414

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    D  G E 
Sbjct: 204 ILFVGVNGVGKTTTIGKLAHRLKSEGKSVMLAA--GDTFRAGAIEQ--LQVWGDRVGVEV 259

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
            A    +     + + IR A   G  IL+CD
Sbjct: 260 IAQSEGSDPAAVMYDAIRAAKNRGVDILICD 290


>gi|307318707|ref|ZP_07598140.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|306895734|gb|EFN26487.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
          Length = 169

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 72/204 (35%), Gaps = 47/204 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64
            EG  G GKT+    +   L+R+ Y V     V    G     +A     L+   +    
Sbjct: 8   IEGGSGTGKTS----VATELERRGYHVVHGDRVLAYVGDPETGQA-----LAGPPEGADR 58

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                     R+D V      A+             +++   G R+  + L L       
Sbjct: 59  IVWGYAHWIWRVDKVR-----AIAADTT------HPATFFCGGSRNFHKFLDLF------ 101

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                 D   +LD+ V+   +R+  R +          ER  V+ + + R+ +L      
Sbjct: 102 ------DKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRYHRTRE-YL------ 145

Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208
           P   + +D+A++  SV  +IL  +
Sbjct: 146 PAGIN-IDTAYTVPSVVDDILAKL 168


>gi|190571084|ref|YP_001975442.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus
           Pel]
 gi|213019604|ref|ZP_03335410.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus
           JHB]
 gi|190357356|emb|CAQ54787.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus
           Pel]
 gi|212995026|gb|EEB55668.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus
           JHB]
          Length = 202

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 76/230 (33%), Gaps = 38/230 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N G+ +      GAGKTT    L          V   TR+P            +      
Sbjct: 5   NEGILLILSSPSGAGKTTISEKLLEQSTDLVMSVSMTTRKPRPGEVNGKDYFFVTEEKFH 64

Query: 61  EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           E     + + +A    +     ++ I   L  G  +L       +  +QG          
Sbjct: 65  ELCKAGQMLEYAKVFENFYGIPKDFIEQNLSSGISVLL------NIDWQGAFH-----LF 113

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           + L+E  V         IL  P   +    R+Q R S  E           + I  +  +
Sbjct: 114 EILREKVVS------VFIL--PPSMEELRLRLQRRNSDDE-----------IEIERRLAE 154

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
              +I+++      I++   +       I +I+ + + K++   SS KD+
Sbjct: 155 AQKEISKSNKYDYVIIN--DNLDKSVEEIKSILSKGMLKKLEEKSSLKDL 202


>gi|58221319|gb|AAW68302.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 140

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++A  
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQA-- 107

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|6093523|sp|O07309|NODQ_RHISB RecName: Full=Bifunctional enzyme nodQ; AltName: Full=Nodulation
           protein Q; Includes: RecName: Full=Sulfate
           adenylyltransferase subunit 1; AltName:
           Full=ATP-sulfurylase large subunit; AltName:
           Full=Sulfate adenylate transferase; Short=SAT; Includes:
           RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase
 gi|2148989|gb|AAB95249.1| NodQ [Rhizobium sp. BR816]
          Length = 633

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L R L  +    +                 +L       G   + 
Sbjct: 465 FTGLSGSGKSTIANALDRLLHARGKHTY-----------------MLDGDNVRHGLNRDL 507

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +     G I+L      S  +            ++  + I  
Sbjct: 508 GFTEADRVENIRRVAEVAKLMADAGLIVLV-----SFISPFRGERRMARELMEEGEFIE- 561

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P++   +R
Sbjct: 562 --------IFVDTPLEECARR 574


>gi|86141859|ref|ZP_01060383.1| deoxyguanosine kinase/deoxyadenosine kinase subunit
           [Leeuwenhoekiella blandensis MED217]
 gi|85831422|gb|EAQ49878.1| deoxyguanosine kinase/deoxyadenosine kinase subunit
           [Leeuwenhoekiella blandensis MED217]
          Length = 204

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 40/200 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63
           I+  G  GAGKTT   LL +                     +   +  L      ++ + 
Sbjct: 3   IAIAGNIGAGKTTLTKLLAKH------------YNWQPQFEDVVDNPYLDDFYNEMERWS 50

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQ 113
              +     +     +E         GK ++ DR  + D+        +      RD   
Sbjct: 51  FNLQVYFLNSRFRQLLE-----IQESGKDIIQDRTIYEDAHIFAPNLHAMGLLTNRDFHN 105

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +  L  L E  VQ   PD  I L   +   + ++  R    E++         +    + 
Sbjct: 106 YASLFELMESVVQG--PDLLIYLRSSIPNLVAQIHKRGREYENSI-------SIDYLSRL 156

Query: 174 RQIFLDIARN-QPDRCHIVD 192
            + +     +       I+D
Sbjct: 157 NERYEAWIHDYNKGNLLIID 176


>gi|302829715|ref|XP_002946424.1| adenylate kinase [Volvox carteri f. nagariensis]
 gi|300268170|gb|EFJ52351.1| adenylate kinase [Volvox carteri f. nagariensis]
          Length = 205

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 66/224 (29%), Gaps = 55/224 (24%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGV 59
           F+   G  G+GK T   L+    +        T +        G P  +  + ++L   +
Sbjct: 21  FVV--GGPGSGKGTQCDLIS---RDFGVPFFSTGDLIRSLIASGCPEGKQLQDIILQGQI 75

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHLF 116
                    ++  A            A      +L D   R  ++   +Q +        
Sbjct: 76  IP-SEVTVGLLQKAM-----------ASATSDTVLIDGFPRNTENRTVWQSQVGYDCE-- 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---R 173
                            ++ D P ++ ++R++ R   R     +  +++      +    
Sbjct: 122 ---------------LVLLFDCPEEVMVERLRRRAEGRADDNEETIKKRVQNFKSQMAPV 166

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
              +  I      +   + +         +I + +  L ++R +
Sbjct: 167 LDYYRAI-----GKVTTISTDRPVD----DIYSELSSLWRQRFA 201


>gi|295696036|ref|YP_003589274.1| guanylate kinase [Bacillus tusciae DSM 2912]
 gi|295411638|gb|ADG06130.1| guanylate kinase [Bacillus tusciae DSM 2912]
          Length = 227

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41
          GL +   G  GAGK T  + L+  L    Y V   TR P
Sbjct: 12 GLLVVLSGPSGAGKGTVCTALREHLPAMKYSVSVTTRLP 50


>gi|169825243|ref|YP_001692854.1| hypothetical protein FMG_1546 [Finegoldia magna ATCC 29328]
 gi|167832048|dbj|BAG08964.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
          Length = 287

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 85/235 (36%), Gaps = 35/235 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ +  + ++ AGK + +  +   L      V   ++P      E   H  L      
Sbjct: 56  KKGILVVLQAMDAAGKDSLVKKVFTALNPAGCKVTSFKQPST----EELDHDYLWRITKA 111

Query: 62  FGAEAEAIVFAAARLD-----HVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHL 115
             A  E  +F  +  +      V N++     +      D RF D + A++   D++   
Sbjct: 112 TPAYGEVGIFNRSHYEDVLVTRVHNLVNKKNDDDFW---DKRFEDIN-AFEKYLDNNGIK 167

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHE 171
            +                  L +  D   +R+ +R +L E     A  D  ER++   + 
Sbjct: 168 VVK---------------FFLHVSKDEQKERLLDRINLEEKHWKFAASDILERENWDDYH 212

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQS--VATNILNIVWELVQKRVSPLSSKKD 224
           +  +  L+         ++V + + + +  V + ++  +++ +      LS K++
Sbjct: 213 RAYEDMLEHTSTDYAPWYVVPADNKWYTRLVVSEVMLDLFKQLDPHTPKLSEKEE 267


>gi|157364479|ref|YP_001471246.1| guanylate kinase [Thermotoga lettingae TMO]
 gi|157315083|gb|ABV34182.1| Guanylate kinase [Thermotoga lettingae TMO]
          Length = 208

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 52/175 (29%), Gaps = 28/175 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G+     G  G GKT+ I L  + ++   + V   TR              +      +
Sbjct: 2   KGVLYVVSGPSGVGKTSIIELTLKKVKNIVFSVSCTTRPKRPGEIDGKDYFFVSEPSFMK 61

Query: 62  FGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                E + +A     +   ++  +   L  GK +L D         QG     +     
Sbjct: 62  MVENGEFLEWAVVHSYYYGTLKKFVEEQLENGKNVLLD------IDVQGAMTVMKKAG-- 113

Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE--RKDVMI 169
                       D   I   P   +   +R+  R +  ++      E  ++++  
Sbjct: 114 ------------DAVYIFIAPPSFEELKQRLVKRGTEDKTNLERRLEDAKRELSF 156


>gi|153214853|ref|ZP_01949661.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           1587]
 gi|124115096|gb|EAY33916.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           1587]
          Length = 383

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 186 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 241

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 242 TGADSASVIYDAIEAAKARGIDVVIAD 268


>gi|256762084|ref|ZP_05502664.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256683335|gb|EEU23030.1| conserved hypothetical protein [Enterococcus faecalis T3]
          Length = 176

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    DE G 
Sbjct: 16  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 65  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 110 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 139


>gi|212638162|ref|YP_002314682.1| adenylylsulfate kinase [Anoxybacillus flavithermus WK1]
 gi|212559642|gb|ACJ32697.1| Adenylylsulfate kinase [Anoxybacillus flavithermus WK1]
          Length = 196

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 28/117 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L  +N   +                 +L       G  ++ 
Sbjct: 29  FTGLSGSGKSTLANAVAKTLFEQNVQCY-----------------VLDGDNIRHGLNSDL 71

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A  R +++     V +  +  G+I+L         A+       + L  + L +
Sbjct: 72  GFSAEDRTENIRRIGEVAKLFVDSGQIVLT--------AFISPFRQDRQLVRNKLAQ 120


>gi|124028179|ref|YP_001013499.1| adenylate kinase [Hyperthermus butylicus DSM 5456]
 gi|123978873|gb|ABM81154.1| Adenylate kinase [Hyperthermus butylicus DSM 5456]
          Length = 205

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 81/220 (36%), Gaps = 34/220 (15%)

Query: 6   FISF--EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           FI+    G+ G GKTT +  +   L+ K     +           +A  ++         
Sbjct: 7   FITVIVTGVPGVGKTTVLGRVAEKLRSKGVRFEIVNFGDYMFREASAAGLVRHRDEMRHL 66

Query: 64  A--EAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                  +  +AAR      +I  A  +  G  +L    +D+    +        L  + 
Sbjct: 67  PLRRQLELQESAARA-----IIADASSKLGGDGVLL---VDTHAVIRTSTGFWPGLPENV 118

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           ++E     + PD  ++++ P +I + R Q R   R         R DV   E  R+  L+
Sbjct: 119 VRE-----LKPDSIVLIEAPPEIIVAR-QQRDKSRV--------RSDVASVETVRE-LLE 163

Query: 180 IARNQP-DRCHIVDSAH-SFQSVATN---ILNIVWELVQK 214
           +AR        +V ++    ++V  N       + EL++K
Sbjct: 164 MARKAAMASAVLVAASVYPVENVEGNPDIAAEKIVELIEK 203


>gi|12044892|ref|NP_072702.1| spermidine/putrescine ABC transporter, ATP-binding protein,
          putative [Mycoplasma genitalium G37]
 gi|2506105|sp|P47288|POTA_MYCGE RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|3844651|gb|AAC71258.1| spermidine/putrescine ABC transporter, ATP-binding protein,
          putative [Mycoplasma genitalium G37]
 gi|166079041|gb|ABY79659.1| spermidine/putrescine ABC transporter, ATP-binding protein,
          putative [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 559

 Score = 39.6 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI+  G  G GKTT + LL 
Sbjct: 30 IKKGEFITILGPSGCGKTTLLRLLA 54


>gi|315173166|gb|EFU17183.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
          Length = 188

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    DE G 
Sbjct: 28  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 77  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          DL  +  LKR   R   +E   ++
Sbjct: 122 VQ------VYYFDLSFEETLKRHSQRNKNQEFGVVE 151


>gi|312884400|ref|ZP_07744105.1| cell division protein FtxY [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367922|gb|EFP95469.1| cell division protein FtxY [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 397

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 200 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A  +G  +++ D
Sbjct: 256 TGADSASVIYDAIESAKAKGVDVVIAD 282


>gi|300718288|ref|YP_003743091.1| putative lipoprotein [Erwinia billingiae Eb661]
 gi|299064124|emb|CAX61244.1| putative lipoprotein [Erwinia billingiae Eb661]
          Length = 244

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 66/227 (29%), Gaps = 52/227 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE---- 61
            I+  G +G+GK+T    L   +++    V V           A   + L     E    
Sbjct: 8   LIAVIGSDGSGKSTVCEHLIVHVKKYGPAVRVHLGKQAGNVGRAVSQLPLMGKSFERAIE 67

Query: 62  ------------FGAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSY--AYQ 106
                        G     ++        +      A   +G ++L DRF  +    AY 
Sbjct: 68  RNTKKVKTKKTKLGLLPSVVIMTFVVRRLLRFRRMLAYRRQGLMVLTDRFPQAQIPGAYD 127

Query: 107 GER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSL 153
           G     D+  +  +  +        + ++     PD  I L++ +D+   R     R  L
Sbjct: 128 GTVFPPDTKGNGLVKWMAGRERSAFRWMAAH--KPDLVIKLNVDLDVACARKPDHRREQL 185

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
            +           ++  E        +          +D+      V
Sbjct: 186 SKKVA-----ATPLLTFEG-----AQLVD--------IDANKPVDQV 214


>gi|229097091|ref|ZP_04228057.1| uridine kinase [Bacillus cereus Rock3-29]
 gi|229103152|ref|ZP_04233838.1| uridine kinase [Bacillus cereus Rock3-28]
 gi|228680257|gb|EEL34448.1| uridine kinase [Bacillus cereus Rock3-28]
 gi|228686320|gb|EEL40232.1| uridine kinase [Bacillus cereus Rock3-29]
          Length = 196

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189
           D TI +D P+DI + R   R    ++    + + K  M H   R+ +L+     +P+   
Sbjct: 111 DVTIFIDTPLDIAMARRILRDFKEDTMSEIHNDLKHYMAHA--RKAYLEAIHTVKPNSDI 168

Query: 190 IVDSAHSFQSVATNILNIVWE 210
           ++D + S   +  +++  +  
Sbjct: 169 VLDGSFSVSEIIDHVVEELDR 189


>gi|163940328|ref|YP_001645212.1| hypothetical protein BcerKBAB4_2369 [Bacillus weihenstephanensis
           KBAB4]
 gi|163862525|gb|ABY43584.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
          Length = 187

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189
           D TI +D P+DI + R   R    +     + + K  + H   R+ +L+     +P+   
Sbjct: 104 DITIFIDTPLDIAMARRILRDFTEDKISEIHNDLKHYITHA--RKAYLEAINTVKPNSDI 161

Query: 190 IVDSAHSFQSVATNILNIVWELVQKRV 216
           ++D +     +   ++ IV E  ++ V
Sbjct: 162 VLDGSLCVNEI---VVQIVEEFSRRNV 185


>gi|257093888|ref|YP_003167529.1| hypothetical protein CAP2UW1_2309 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046412|gb|ACV35600.1| protein of unknown function DUF344 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 422

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 194 IIFEGRDAAGKGGAIKRFTEHLNPRGGRVVALEKPSELERGQW----------------- 236

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                      + +  ++     G+I+ CDR   
Sbjct: 237 -----------YFQRYVKHLPTAGEIVFCDRSWY 259


>gi|255326864|ref|ZP_05367940.1| adenylate kinase [Rothia mucilaginosa ATCC 25296]
 gi|283457570|ref|YP_003362153.1| adenylate kinase [Rothia mucilaginosa DY-18]
 gi|255296081|gb|EET75422.1| adenylate kinase [Rothia mucilaginosa ATCC 25296]
 gi|283133568|dbj|BAI64333.1| adenylate kinase [Rothia mucilaginosa DY-18]
          Length = 187

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 83/218 (38%), Gaps = 40/218 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN  L I   G  GAGK T    +   L+        T         +  R  +      
Sbjct: 1   MNR-LLIV--GPPGAGKGTQAVKIAEALK---IPAIST--------GDIFRKNIK--EET 44

Query: 61  EFGAEAEAIVFAAARL-DHV-ENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHL 115
           E G EA++ + +   + D V  N++R  L E  ++   L D +          R++SQ  
Sbjct: 45  ELGKEAKSYIDSGNLVPDSVTNNMVRARLEESDVVNGFLLDGY---------PRNTSQVH 95

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE-KRR 174
            LDS+  +  +    D  ++L    D  ++R+ NR +  E    D  + ++V+ H  K  
Sbjct: 96  ELDSI--LEAKGEKIDRVLLLVADNDELVERLLNRAA--EQGRTD--DNEEVIRHRLKVY 149

Query: 175 QIFLD-IARNQPDRCHI--VDSAHSFQSVATNILNIVW 209
           +     +     +R  +  V+       V   IL+ + 
Sbjct: 150 EEETAPLIAIYRERGIVKEVNGLGEIAEVTERILDALK 187


>gi|228908277|ref|ZP_04072122.1| uridine kinase [Bacillus thuringiensis IBL 200]
 gi|228851318|gb|EEM96127.1| uridine kinase [Bacillus thuringiensis IBL 200]
          Length = 186

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188
           D TI +D P+DI + R   R    +   +D     D+  +    R+ +L+     +P+  
Sbjct: 101 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 157

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216
            I+D + S   +   I + V EL ++ V
Sbjct: 158 IILDGSLSVSEI---INHAVEELGRREV 182


>gi|229074987|ref|ZP_04207989.1| uridine kinase [Bacillus cereus Rock4-18]
 gi|228708044|gb|EEL60215.1| uridine kinase [Bacillus cereus Rock4-18]
          Length = 196

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189
           D TI +D P+DI + R   R    ++    + + K  M H   R+ +L+     +P+   
Sbjct: 111 DVTIFIDTPLDIAMARRILRDFKEDTMSEIHNDLKHYMAHA--RKAYLEAIHTVKPNSDI 168

Query: 190 IVDSAHSFQSVATNILNIVWELVQKR 215
           ++D + S     + I+N V E + +R
Sbjct: 169 VLDGSFSV----SEIINHVVEELDRR 190


>gi|219882752|ref|YP_002477916.1| type II secretion system protein E [Arthrobacter chlorophenolicus
           A6]
 gi|219861758|gb|ACL42099.1| type II secretion system protein E [Arthrobacter chlorophenolicus
           A6]
          Length = 409

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 17/45 (37%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
            I  EG  G+GKTT I+ L + + R         E       E  
Sbjct: 170 LIILEGPTGSGKTTAIAALIKMVNRHYNKHIYMVEDPTEFVHEEI 214


>gi|160947095|ref|ZP_02094262.1| hypothetical protein PEPMIC_01027 [Parvimonas micra ATCC 33270]
 gi|158446229|gb|EDP23224.1| hypothetical protein PEPMIC_01027 [Parvimonas micra ATCC 33270]
          Length = 198

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 63/177 (35%), Gaps = 28/177 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59
           M  G  +   G  G GK T   +L R  +   Y +  T R              + +   
Sbjct: 9   MKKGFLMVVSGPSGVGKGTICDILLRDNKDIKYSISATSRNKRPNEEHGKNYFFVSNDEF 68

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++  A+ + + +A    ++    ++ +  ++ +G +++ +  +D   A Q +++      
Sbjct: 69  EKMIADKKLLEYARVHGNYYGTPKDFVLNSINQGDVVILE--IDVQGALQVKKNY----- 121

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE--RKDVMI 169
                        PD  ++  LP   +   +R+  R +  E          +K+V  
Sbjct: 122 -------------PDAVLVFVLPPDFEELKRRLVERGTEDEETVNLRMNNAKKEVEF 165


>gi|254291953|ref|ZP_04962734.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           AM-19226]
 gi|150422163|gb|EDN14129.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           AM-19226]
          Length = 389

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 192 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 247

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 248 TGADSASVIYDAIEAAKARGIDVVIAD 274


>gi|153826285|ref|ZP_01978952.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           MZO-2]
 gi|149739953|gb|EDM54132.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           MZO-2]
          Length = 395

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 198 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 253

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 254 TGADSASVIYDAIEAAKARGIDVVIAD 280


>gi|153830010|ref|ZP_01982677.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           623-39]
 gi|148874495|gb|EDL72630.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           623-39]
          Length = 385

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 188 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 243

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 244 TGADSASVIYDAIEAAKARGIDVVIAD 270


>gi|312109165|ref|YP_003987481.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1]
 gi|311214266|gb|ADP72870.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1]
          Length = 222

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 67/226 (29%), Gaps = 46/226 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L  +            T   +   +  L     +F   +
Sbjct: 15  ITIAGTVGVGKSTMTKALAKALNFR------------TSLEKVDTNPYLDKFYADFERWS 62

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123
             +   F A R        +     G   + DR +    A+   +   ++  + ++  E 
Sbjct: 63  FHLQIYFLAERF----KEQKRMFEYGGGFVQDRSIYED-AHIFAKMHFENGTMTAVDYET 117

Query: 124 SVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
                           PD  I L+   +  +KR++ R    E        +  V   ++ 
Sbjct: 118 YTSLFQAMVMTPYFPHPDLLIYLEGSFEEVIKRIRERGRPMEQ-------KTPVSYWKEM 170

Query: 174 RQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWE 210
            + +                 +   I++   S + +      I+ E
Sbjct: 171 YERYEKWINEFNACPVLRVNINEYDIIEDEQSIEPIIKKAATIIHE 216


>gi|309364916|emb|CAP23520.2| CBR-DNA-2 protein [Caenorhabditis briggsae AF16]
          Length = 1123

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
            EG+ G+GKTT IS+L + L   N  V +T  
Sbjct: 691 VEGLPGSGKTTLISVLIQCLVATNKKVLLTAF 722


>gi|294790846|ref|ZP_06756004.1| ABC transporter, ATP-binding protein [Scardovia inopinata F0304]
 gi|294458743|gb|EFG27096.1| ABC transporter, ATP-binding protein [Scardovia inopinata F0304]
          Length = 645

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 17/106 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ-RKN---YDVHVTREPG-------------GTPAAEA 49
           ++  G  GAGKTT ++LL RF +  +     D   TRE                T   + 
Sbjct: 429 VAIVGPTGAGKTTLVNLLMRFYEVDQGEITIDGIKTREITRQNLRSHFGMVLQDTWLFDG 488

Query: 50  ARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                L  GV +     +  +  AAR  HV+  +R      + +L 
Sbjct: 489 TIRDNLFYGVHDPSLRTDDRLLEAARATHVDEFVRKLPQGYETVLT 534


>gi|257082963|ref|ZP_05577324.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256990993|gb|EEU78295.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
          Length = 177

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    DE G 
Sbjct: 17  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 66  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140


>gi|229508897|ref|ZP_04398387.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           B33]
 gi|229606695|ref|YP_002877343.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           MJ-1236]
 gi|227011852|gb|ACP08062.1| cell division protein FtsY [Vibrio cholerae O395]
 gi|229354014|gb|EEO18947.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           B33]
 gi|229369350|gb|ACQ59773.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           MJ-1236]
          Length = 389

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 192 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 247

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 248 TGADSASVIYDAIEAAKARGIDVVIAD 274


>gi|223985884|ref|ZP_03635922.1| hypothetical protein HOLDEFILI_03228 [Holdemania filiformis DSM
           12042]
 gi|223962150|gb|EEF66624.1| hypothetical protein HOLDEFILI_03228 [Holdemania filiformis DSM
           12042]
          Length = 206

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 53/183 (28%), Gaps = 41/183 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR--FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  GL I   G  G GK T +        L         TR+           + +    
Sbjct: 20  MKKGLLIVLSGPSGVGKGTILKEFVNDPELNLAYSVSMTTRKMRPGEIEGVNYNFVDRPA 79

Query: 59  VDEFGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
            ++   + E + +A    ++       +     EGK +L                     
Sbjct: 80  FEQAIRDGELLEYAEFVGNYYGTPLKNVEKLRAEGKNVLL-------------------- 119

Query: 116 FLDSLQEISVQEVM------PD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKD 166
                 EI VQ         PD  TI + +P   +   KR++ R +  E        + +
Sbjct: 120 ------EIEVQGCQQVMEKCPDALTIFI-IPPSMEELEKRIRGRGTEPEEIVQQRLSKAN 172

Query: 167 VMI 169
             +
Sbjct: 173 REM 175


>gi|121587716|ref|ZP_01677477.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           2740-80]
 gi|121548015|gb|EAX58093.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           2740-80]
          Length = 395

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 198 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 253

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 254 TGADSASVIYDAIEAAKARGIDVVIAD 280


>gi|15640178|ref|NP_229805.1| cell division protein FtsY [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|229517011|ref|ZP_04406457.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           RC9]
 gi|255743904|ref|ZP_05417859.1| signal recognition particle receptor protein FtsY [Vibrio cholera
           CIRS 101]
 gi|9654548|gb|AAF93324.1| cell division protein FtsY [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|229346074|gb|EEO11046.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           RC9]
 gi|255738387|gb|EET93777.1| signal recognition particle receptor protein FtsY [Vibrio cholera
           CIRS 101]
          Length = 391

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 194 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 249

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 250 TGADSASVIYDAIEAAKARGIDVVIAD 276


>gi|59797991|sp|Q5WGU8|KCY_BACSK RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
          Length = 225

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  ++ +G  GAGK+T        L     D           A      +     + 
Sbjct: 1   MAKGFNVAIDGPAGAGKSTVAKKTAEKLGFLYIDTGAMYRAITFAALAEGIDLHDGKALG 60

Query: 61  EFGAEAEAIVFAAARLDHVEN---VIRPALMEGKI------LLCDRFLDSSY-AYQGERD 110
           +   ++E  + ++     V      I  A+   ++      +   R +     A Q E  
Sbjct: 61  KLLEKSELRLESSNEGTAVFWNGADITAAIRTNEVNSNVSLVASHREVREGMTAMQQELA 120

Query: 111 SSQHLFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNRY-SLRESACLDYFERKDV 167
            S++  LD  ++I    V+PD    + L   V+   +R + R+    E      FE+   
Sbjct: 121 KSKNAVLDG-RDIGTH-VLPDANVKVFLTASVE---ERARRRHLEQLEKGLPSDFEQLKK 175

Query: 168 MIHEK-----RRQIF-LDIARNQPDRCHIVD-SAHSFQSVATNILNIVWE 210
            I ++      R I  L  A +      +VD ++     V   IL++V E
Sbjct: 176 DIAKRDELDSTRAIAPLKQAADA----QVVDTTSMGIDEVVETILDLVKE 221


>gi|268532354|ref|XP_002631305.1| C. briggsae CBR-DNA-2 protein [Caenorhabditis briggsae]
          Length = 1071

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
            EG+ G+GKTT IS+L + L   N  V +T  
Sbjct: 674 VEGLPGSGKTTLISVLIQCLVATNKKVLLTAF 705


>gi|227080382|ref|YP_002808933.1| cell division protein FtsY [Vibrio cholerae M66-2]
 gi|254851533|ref|ZP_05240883.1| cell division protein FtsY [Vibrio cholerae MO10]
 gi|262151142|ref|ZP_06028281.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           INDRE 91/1]
 gi|262167011|ref|ZP_06034728.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           RC27]
 gi|298501091|ref|ZP_07010891.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           MAK 757]
 gi|227008270|gb|ACP04482.1| cell division protein FtsY [Vibrio cholerae M66-2]
 gi|254847238|gb|EET25652.1| cell division protein FtsY [Vibrio cholerae MO10]
 gi|262024529|gb|EEY43213.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           RC27]
 gi|262031036|gb|EEY49661.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           INDRE 91/1]
 gi|297540125|gb|EFH76186.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           MAK 757]
          Length = 393

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 196 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 251

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 252 TGADSASVIYDAIEAAKARGIDVVIAD 278


>gi|147673157|ref|YP_001218274.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           O395]
 gi|229508422|ref|ZP_04397926.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           BX 330286]
 gi|146315040|gb|ABQ19579.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           O395]
 gi|229354695|gb|EEO19617.1| signal recognition particle receptor protein FtsY [Vibrio cholerae
           BX 330286]
          Length = 387

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 190 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 245

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 246 TGADSASVIYDAIEAAKARGIDVVIAD 272


>gi|121728299|ref|ZP_01681330.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           V52]
 gi|121629429|gb|EAX61858.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           V52]
          Length = 397

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 200 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 256 TGADSASVIYDAIEAAKARGIDVVIAD 282


>gi|71019167|ref|XP_759814.1| hypothetical protein UM03667.1 [Ustilago maydis 521]
 gi|46099612|gb|EAK84845.1| hypothetical protein UM03667.1 [Ustilago maydis 521]
          Length = 566

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 10/94 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G GKTT   LL +         R+    H   E   T +       +L   +     
Sbjct: 67  GPPGTGKTTLARLLAKSASSTDSTCRQGPPPHRFVEISATNSGANDVKKILDEALHRLEL 126

Query: 65  EAEAIVFAAARLDHV----ENVIRPALMEGKILL 94
            A+  +     +       ++V+ PA+ +G+I+L
Sbjct: 127 TAQRTLLFIDEIQRFNRAQQDVLLPAVEKGQIVL 160


>gi|315425933|dbj|BAJ47583.1| signal recognition particle receptor [Candidatus Caldiarchaeum
           subterraneum]
          Length = 302

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
           I F G  G+GKTT +  L  +L+++ Y V +  
Sbjct: 109 ILFVGPNGSGKTTTVVKLAHYLRKRGYSVILAS 141


>gi|288924655|ref|ZP_06418592.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|315607660|ref|ZP_07882655.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|288338442|gb|EFC76791.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|315250843|gb|EFU30837.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 361

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 6/102 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   AGKTT +  +        Y V    E     A     ++  + G+   G +A
Sbjct: 7   IVLTGGPCAGKTTALIKVIEHFNSLGYQVFTIPEVPTMFAQAGMNYLTKNQGLFYQGEKA 66

Query: 67  --EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             E  +    +   +         +  +++CDR      AY 
Sbjct: 67  TLEIQLGLEDKFMRMAKE----CDKPTLIVCDRGAMDISAYM 104


>gi|268316793|ref|YP_003290512.1| adenylate kinase [Rhodothermus marinus DSM 4252]
 gi|262334327|gb|ACY48124.1| adenylate kinase [Rhodothermus marinus DSM 4252]
          Length = 215

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 74/233 (31%), Gaps = 55/233 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  GAGK T    L             T         +  R  +        G +A
Sbjct: 3   IVFMGPPGAGKGTQARRLAA---AYGLRHIST--------GDLIRAAIQEG--TPLGKKA 49

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122
           +  +     +  + V  + + AL E      D F+   +     R   Q  +LD+L E  
Sbjct: 50  QPYIEKGQLVPDELVWELAKAALAENHY---DHFVLDGF----PRTIRQAEWLDALLEQQ 102

Query: 123 -----ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-----------FERKD 166
                I +  ++PD     DL V+  L R +      E+  LD+             ++ 
Sbjct: 103 GRPLQIVLNLIVPD-----DLIVER-LSRRRVHKLTGENYHLDFNPPPPDVDPSLIIQRP 156

Query: 167 VMIHEKRR---QIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVWE 210
               E  R   +++      + +    R  +  VD   S   V   I  ++  
Sbjct: 157 DDRPEAIRRRLEVYRTTHEPLEQYYRQRGLLVDVDGVGSMDEVFARIQEVLRR 209


>gi|118469224|ref|YP_889229.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium smegmatis str. MC2 155]
 gi|118170511|gb|ABK71407.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase
           [Mycobacterium smegmatis str. MC2 155]
          Length = 617

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 20/97 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  + F G+ G+GK++   L+++ L  K    +                 +L     
Sbjct: 443 LTRGRTVWFTGLSGSGKSSVAMLVEQKLLGKGVPAY-----------------VLDGDNL 485

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILL 94
             G  A+     A R +++  +   A      G+I+L
Sbjct: 486 RHGLNADLGFSMADRAENLRRLAHVASLLADSGQIVL 522


>gi|46396074|sp|O61069|KAD_TRYBR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|2967695|gb|AAC28787.1| adenylate kinase [Trypanosoma brucei rhodesiense]
          Length = 209

 Score = 39.6 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 36/159 (22%)

Query: 1   MNSGL----FISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARH 52
           M  G+    FI+  G  G+GK T    +   L            +TR            H
Sbjct: 44  MRRGIPLQIFIA--GPAGSGKRTQCKNIADRLGVVLISSGQ--VLTRGVESGSETSQLAH 99

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
             +S G      +    +    RL   +   +  L+EG                  R++ 
Sbjct: 100 SYVSRGERV--PDTLVSMIMKDRLSQSDACEKGWLVEGY----------------PRNAQ 141

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           Q   ++         V+P   I+LDLP D+  +R+++R 
Sbjct: 142 QAQAVEEC------GVIPQVFILLDLPEDLSFRRLEHRR 174


>gi|322515294|ref|ZP_08068291.1| adenylate kinase [Actinobacillus ureae ATCC 25976]
 gi|322118670|gb|EFX90882.1| adenylate kinase [Actinobacillus ureae ATCC 25976]
          Length = 241

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 72/234 (30%), Gaps = 55/234 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +             T         +  R  +      E G +A
Sbjct: 30  IILLGAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 76

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +A++        V + +  AL++ +I   D    + +   G   +      D+L+E    
Sbjct: 77  KALM---DEGKLVPDKLTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKE---A 126

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166
            V  D  +  D+  ++ ++R+  R                       +    D   R+D 
Sbjct: 127 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNQPKVEGKDDVTGEDLIIRQDD 186

Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                     + H++ +     +   A     R   +D     + V+  +  I+
Sbjct: 187 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 240


>gi|296282603|ref|ZP_06860601.1| adenylate kinase [Citromicrobium bathyomarinum JL354]
          Length = 215

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 49/232 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    L             T         +  R  + +      G +A
Sbjct: 3   IILLGPPGAGKGTQAHRLVDH---HGMRQLST--------GDMLRAAVKAG--TPVGKQA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEISV 125
           +AI+      + V + I  AL++ +  L     D+   + G   + +Q   LD+L  ++ 
Sbjct: 50  KAIM---DAGELVSDDIVSALIDDE--LASMSADTGAIFDGYPRTRAQAEQLDAL--LAK 102

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDY-----------------FERKD 166
                D  I L +  +  + R+  R++         D                  F+R+ 
Sbjct: 103 HGRKLDRVIELQVDEEALVDRITGRFTCAACGEGYHDRHKLPQIEGVCDKCGSTEFKRRP 162

Query: 167 VMIHEKRR---QIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVW 209
               E  R   +++            +      VD   S + V+++I  ++ 
Sbjct: 163 DDNEETVRHRMEVYRSETAPILPYYEEQGLVARVDGMGSIEEVSSSIDALLE 214


>gi|257899516|ref|ZP_05679169.1| deoxynucleoside kinase [Enterococcus faecium Com15]
 gi|257837428|gb|EEV62502.1| deoxynucleoside kinase [Enterococcus faecium Com15]
          Length = 217

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 42/234 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++   ++      +  Y+     E      A                 E
Sbjct: 2   IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114
             A +     L+     I+ A+ +   +L DR  + DS           A + E      
Sbjct: 47  QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L  + ++E+  +  +  PD  + + +  D  L+R++ R    E      F+      +++
Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162

Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217
             + +        +   I +D           + + V   I   + E+ Q  ++
Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTELA 216


>gi|55959193|emb|CAI15063.1| guanylate kinase 1 [Homo sapiens]
          Length = 241

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 37/187 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 22  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 68

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G D +    E +     R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 69  ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +         
Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 176

Query: 169 IHEKRRQ 175
           +  + ++
Sbjct: 177 MESRNQE 183


>gi|123443391|ref|YP_001007365.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|166988291|sp|A1JNV2|AROL_YERE8 RecName: Full=Shikimate kinase 2; Short=SK 2
 gi|122090352|emb|CAL13220.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica
           8081]
          Length = 174

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 44/212 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  GAGKTT    L + L    Y    T          +   ++   G D
Sbjct: 1   MTQTIFMV--GARGAGKTTIGKALAQAL---GYRFIDTDLFMQQTLQSSVAEIVAREGWD 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F       +        V          G  +L     + ++  Q              
Sbjct: 56  GFRLRESMAL------QTVTAPKTVVATGGGAVLS--HDNRTFMRQHG------------ 95

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFL 178
                        I L    ++  +R+       +   L       + + +   R  ++ 
Sbjct: 96  -----------MVIYLRASANVLAERLAEDPEDAQRPSLTGKPIVEEMLDVLASREPLYQ 144

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           ++A       H++D+    + V   IL+I+ +
Sbjct: 145 EVAH------HVLDATQPPEEVVEQILHILAD 170


>gi|253578851|ref|ZP_04856122.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849794|gb|EES77753.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 207

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 30/176 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           MN G+ +   G  GAGK T +  L          V   TR+P   P  E  R        
Sbjct: 1   MNKGILVVVSGFSGAGKGTVMKRLMEKYDGYALSVSATTRKP--RPGEEDGREYFFRTRD 58

Query: 60  DEFGAEAE-AIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +      E A++  A  +++      + +   L  G+ ++ +         QG     + 
Sbjct: 59  EFEKLIEEDALLEYAQYVENYYGTPRSYVEEQLQAGRNVILE------IEIQGAMKIKEK 112

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168
           +              P+  ++   P   +   +R+  R +       D   R    
Sbjct: 113 I--------------PEALLVFVTPPTVEELERRLTGRGTETAQVIADRLARAGEE 154


>gi|209546952|ref|YP_002278870.1| hypothetical protein Rleg2_4895 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538196|gb|ACI58130.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 169

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 41/201 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G GKT+    +   L+R+ Y V    +       +    + L+   +        
Sbjct: 8   IEGGSGTGKTS----VATELERRGYHVVH-GDRVLAYVGDPETGLALAGPPEG------- 55

Query: 69  IVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               A R      + I P + + + +  D    +++   G R+  + L L          
Sbjct: 56  ----ADRIAWGYAHWIWP-VDKVRAIAADTTHPATFFCGGSRNFHKFLDLF--------- 101

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
              D   +LD+ V+   +R+  R +          ER  V+ + + R+    +       
Sbjct: 102 ---DKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRYHRSRE---HLPAGNN-- 150

Query: 188 CHIVDSAHSFQSVATNILNIV 208
              +D+A++  SV  +IL  +
Sbjct: 151 ---IDTANTIPSVVDDILAKL 168


>gi|116334546|ref|YP_796073.1| cobalt ABC transporter ATPase [Lactobacillus brevis ATCC 367]
 gi|116099893|gb|ABJ65042.1| ABC-type cobalt transport system, ATPase component (duplicated
           domains) [Lactobacillus brevis ATCC 367]
          Length = 550

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +++G FI+  G  G+GKTT +  LK  L                  A +        G  
Sbjct: 29  IHAGEFITLVGATGSGKTTLLKQLKHELWPAGERTGSLTFQDTAIQALSPVESAQQIGYV 88

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK--ILLCDR------FLDSSYAYQGERDSS 112
               + + I+        +E +  P    G     + DR      +LD ++  Q   ++ 
Sbjct: 89  AQDPQVQPIM-----ATVMEELAFPLENLGYPTATINDRIAEIANYLDLNHLLQRAIETL 143

Query: 113 QHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLK 145
               L  +   SV  + P   I+LD     L      K
Sbjct: 144 SGGQLQLVNLASVLALKPQ-VILLDEPTAQLDPTTAQK 180


>gi|88703537|ref|ZP_01101253.1| Uridine kinase [Congregibacter litoralis KT71]
 gi|88702251|gb|EAQ99354.1| Uridine kinase [Congregibacter litoralis KT71]
          Length = 218

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 27/187 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGG----TPAAEAARHVLLSCGVD 60
           I+  G  G+GK+     L   L+R     DV + +E       +  +  AR  +     D
Sbjct: 6   IAIAGPSGSGKSLFAETLCEELRRDAPLLDVVLIKEDAYYRDQSHMSLEARETV---NYD 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117
              A  + ++       H+E     AL  G+ +   + D  + S  A       +  + +
Sbjct: 63  HPDAIEQDLL-----ASHLE-----ALSAGQAVEVPIYDYTVHSRTAETISVSPAPVIIV 112

Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           + +  ++ + +         +D P+DI L R   R        LD          E  R 
Sbjct: 113 EGILLLTHRALREACHIKFYMDTPLDICLLRRMARDIKERGRSLD---SVTAQYRESVRP 169

Query: 176 IFLDIAR 182
           ++ +  R
Sbjct: 170 MYHEFIR 176


>gi|325954014|ref|YP_004237674.1| guanylate kinase [Weeksella virosa DSM 16922]
 gi|323436632|gb|ADX67096.1| Guanylate kinase [Weeksella virosa DSM 16922]
          Length = 188

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M  G  I F    GAGKTT +      L   ++ V  T
Sbjct: 1  MQKGKLIVFSAPSGAGKTTLVKHALEKLDNLSFSVSCT 38


>gi|323484697|ref|ZP_08090056.1| hypothetical protein HMPREF9474_01807 [Clostridium symbiosum
          WAL-14163]
 gi|323691764|ref|ZP_08106021.1| hypothetical protein HMPREF9475_00883 [Clostridium symbiosum
          WAL-14673]
 gi|323401934|gb|EGA94273.1| hypothetical protein HMPREF9474_01807 [Clostridium symbiosum
          WAL-14163]
 gi|323504130|gb|EGB19935.1| hypothetical protein HMPREF9475_00883 [Clostridium symbiosum
          WAL-14673]
          Length = 503

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          I FEG+  AGK   I+ L + L  + +DV+ +R PG
Sbjct: 43 IVFEGLGAAGKGVQINRLIQPLDPRGFDVYASRRPG 78


>gi|309379872|emb|CBX21648.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 487

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 294 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 348

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 349 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 399

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 400 AMPDAPHEIIVVLD 413


>gi|297293177|ref|XP_001085840.2| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1 isoform 4 [Macaca mulatta]
          Length = 680

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 115 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 160

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 161 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 208

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 209 FFEVFVDAPLHVCEQR 224


>gi|237802351|ref|ZP_04590812.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331025208|gb|EGI05264.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 514

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 315 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 370

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 371 TGADSASVIFDAVQAAKARGIDVLIAD 397


>gi|146387610|pdb|2OFX|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1 In
           Complex With Adpmg And Paps
 gi|146387611|pdb|2OFX|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1 In
           Complex With Adpmg And Paps
          Length = 207

 Score = 39.6 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 39  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 84

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 85  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 132

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 133 FFEVFVDAPLHVCEQR 148


>gi|299065811|emb|CBJ36989.1| putative Deoxyadenosine kinase [Ralstonia solanacearum CMR15]
          Length = 214

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 58/177 (32%), Gaps = 22/177 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  GAGKT     L   L+       +   P   P                   + 
Sbjct: 9   IVVEGPIGAGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQ- 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQE-I 123
             + F   R   +    + A + G+ ++ D FL  D  +A Q    + +    D++ + +
Sbjct: 61  --LRFLQQRAQRLA-AWQKATLTGERIVADSFLPRDRLFA-QLTLPADELALYDAMAQAL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++     D  + L    +  L R+  R    E+         D    E+    + ++
Sbjct: 117 ALPPQRIDLVVCLQARAEDLLPRIAKRAVPYETGI-------DAEYLERICAAYGEL 166


>gi|160903317|ref|YP_001568898.1| ABC transporter related [Petrotoga mobilis SJ95]
 gi|160360961|gb|ABX32575.1| ABC transporter related [Petrotoga mobilis SJ95]
          Length = 249

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 73/232 (31%), Gaps = 43/232 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE--- 65
           F G  GAGKTT I +L   L+  +  + +  +       E  R + +     +       
Sbjct: 32  FLGPNGAGKTTTIKMLTGTLKPTSGQIFIMDKDYNNYELEIKREIGVVPDEPKMYENLKG 91

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDSLQEIS 124
           +E I F         N I     E    +CD F       Y G+        L  +  + 
Sbjct: 92  SEYIEFVMNVYKLNSNEIHSRFNE----ICDAFGIDYLNDYIGDYSHGMKQKL-MVASVL 146

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           +++      I LD    +GL     R +      L  ++ +   I        L+IA   
Sbjct: 147 MRKPK---VIFLD-EPTVGLD---ARAARILKELLQKYKSEGSAIFFTTH--ILEIAEKM 197

Query: 185 PDRCHIVD-------------------SAHSFQSVA------TNILNIVWEL 211
            DR  I+D                      S + +       + +  I+ EL
Sbjct: 198 CDRIGIIDHGRILAEGNLEELRSLSKLGNRSLEDIFLELTGGSEVKEIIDEL 249


>gi|145301094|ref|YP_001143935.1| kinase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142853866|gb|ABO92187.1| predicted kinase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 165

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 19/92 (20%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          + I F G+ G+GK+T    L + L      +            +A R        +E G 
Sbjct: 1  MLIIFSGLPGSGKSTIARALAQRLGAVYLRI--------DTIEQAIRDA--ERTGEEMGP 50

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              + +  AR           L  G  ++ D
Sbjct: 51 AGYFVAYGLAR---------ENLKLGSTVITD 73


>gi|119387101|ref|YP_918156.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Paracoccus denitrificans PD1222]
 gi|119377696|gb|ABL72460.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Paracoccus denitrificans PD1222]
          Length = 640

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +++++ L                         LL       G   + 
Sbjct: 474 FTGLSGSGKSTIANIVEKKLHALGKH-----------------SFLLDGDNIRHGLNRDL 516

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V R     G I+L         A+     S + +  D    ++ 
Sbjct: 517 GFTDADRVENIRRVGEVARLMTDAGLIVLT--------AFISPFRSERQMVRDL---MAP 565

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E +    + +D P+++   R
Sbjct: 566 GEFVE---VFVDTPLEVAEAR 583


>gi|46108894|ref|XP_381505.1| hypothetical protein FG01329.1 [Gibberella zeae PH-1]
          Length = 207

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 32/151 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T  + L++ L       +                  L      
Sbjct: 22  QRGLTIWLTGLSASGKSTVATALEQHLLHLGVAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERD--SSQHLFLD 118
           FG   +       R +++  +   A +         F DSS  A         +      
Sbjct: 65  FGLNKDLGFSEVDRNENIRRISEVAKL---------FADSSTIAITSFISPYRADRQVAR 115

Query: 119 SLQEISVQE---VMPDCTIILDLPVDIGLKR 146
            L E + Q     +P   + +D+P+++  +R
Sbjct: 116 QLHEQATQGGDAPIPFVEVYVDVPLEVAEQR 146


>gi|224541572|ref|ZP_03682111.1| hypothetical protein CATMIT_00742 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525484|gb|EEF94589.1| hypothetical protein CATMIT_00742 [Catenibacterium mitsuokai DSM
           15897]
          Length = 352

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 45/185 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY--------DVHVTREPGGTPAAEAARHVLLSCG 58
           I+ +G  G+GKTT  + LK +     +        +   T+E    P     R       
Sbjct: 185 IAIDGRCGSGKTTLANKLKAYFDCHIFHMDDFYLQEYQRTQERYNEPGGNVDRERFKKEV 244

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           ++                +H + + RP            F  S+ +   E     +  ++
Sbjct: 245 LEPL-------------KEHQDVLYRP------------FDCSTMS-ISEGALYSYKPIN 278

Query: 119 SLQEISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            ++        P      D TI LD+   +  KR++ R        L+ F +K + + EK
Sbjct: 279 IIE--GSYSCHPELIDDYDMTIFLDIDESLRYKRIEERNG---KEALNMFIKKWIPLEEK 333

Query: 173 RRQIF 177
               F
Sbjct: 334 YFSSF 338


>gi|209881658|ref|XP_002142267.1| UMP-CMP kinase [Cryptosporidium muris RN66]
 gi|209557873|gb|EEA07918.1| UMP-CMP kinase, putative [Cryptosporidium muris RN66]
          Length = 224

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 72/215 (33%), Gaps = 44/215 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    +        Y            A +  R   ++        +   ++
Sbjct: 33  GPPGSGKGTQCERIVEH-----YSFIHLS------AGDCLREAQIN------NDDTSKLI 75

Query: 71  FAAARLDHVE------NVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSL 120
               R   +        ++R  + E        L D F  +    +G  D+     ++ L
Sbjct: 76  DHYIREGLIVPVEITIKLLRKKMQEHGWYDNYFLIDGFPRNQNNMKGWFDNVSSDEVEVL 135

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIF 177
             + +    PD     D+ V+  LKR   + S R     +   ++  + HE+     + F
Sbjct: 136 GCLFLN--CPD-----DIVVERLLKR--GKTSGRTDDNKETIVKRLKVYHEETMPIVKYF 186

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +I     ++C  +D++     V   +   + E++
Sbjct: 187 KEI-----NKCFTIDASPPIDEVWKTVRTSIEEII 216


>gi|160902147|ref|YP_001567728.1| ABC transporter related [Petrotoga mobilis SJ95]
 gi|160359791|gb|ABX31405.1| ABC transporter related [Petrotoga mobilis SJ95]
          Length = 298

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA--EAARHVLLSCG 58
           M  G  I++ G  GAGKTT I L+   L+    +V V  E   +     +    VL   G
Sbjct: 24  MQEGDVIAYVGPNGAGKTTTIKLILGLLKPSTGEVKVFSENPYSSLNARKKIDFVLDHPG 83

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALME 89
           VD+     E + F +       N I   L +
Sbjct: 84  VDDDLTAYENLKFYSMLYHAKVNNIDNILKK 114


>gi|157960069|ref|YP_001500103.1| sporulation domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157845069|gb|ABV85568.1| Sporulation domain protein [Shewanella pealeana ATCC 700345]
          Length = 493

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDE 61
            +   G +GAGKTT  + L   L+  +  + +   P    +AE  R +L+        D+
Sbjct: 30  LMVLTGEDGAGKTTLATALVNELENHSSALVIC--PKHCDSAEIRRKILIQLLSDPVFDD 87

Query: 62  FGAEAEAIVFAAA 74
                E ++    
Sbjct: 88  EIPLPECLLSTLD 100


>gi|146298505|ref|YP_001193096.1| guanylate kinase [Flavobacterium johnsoniae UW101]
 gi|146152923|gb|ABQ03777.1| Guanylate kinase [Flavobacterium johnsoniae UW101]
          Length = 190

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          MN G  I F    G+GKTT +  L
Sbjct: 1  MNKGKLIVFSAPSGSGKTTIVKHL 24


>gi|328957025|ref|YP_004374411.1| manganese transport system ATP-binding protein MntB [Carnobacterium
           sp. 17-4]
 gi|328673349|gb|AEB29395.1| manganese transport system ATP-binding protein MntB [Carnobacterium
           sp. 17-4]
          Length = 256

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 4/91 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCG 58
            G   +  G  GAGK+T I  L   ++    +V  T E          ++++     +  
Sbjct: 36  KGTLTAIVGPNGAGKSTLIKSLINLIKPIAGEVDFTFEQTKDENYGKNKNLVAYVPQNGS 95

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALME 89
           VD         V    R  H+    RP   +
Sbjct: 96  VDWDFPTTVLDVVVMGRYGHLGWFKRPKKKD 126


>gi|319950538|ref|ZP_08024448.1| guanylate kinase [Dietzia cinnamea P4]
 gi|319435788|gb|EFV90998.1| guanylate kinase [Dietzia cinnamea P4]
          Length = 200

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 36/183 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPA---------AEAAR 51
             G  I   G    GK+T ++ L+  L    + V   TR+P               E  R
Sbjct: 15  KRGRLIVLAGPSAVGKSTVVARLRERLSDLYFSVSMTTRDPRPGEVDGRDYHFVTTEEFR 74

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
             +    + E+      +  +    +     +R AL EG+ +L                 
Sbjct: 75  DAVAGGRMLEWAEIHRGLQLSGTPAE----PVRRALDEGRPVLI---------------E 115

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
                +  ++E   +      T+ L  P   +    R++ R +          E   V +
Sbjct: 116 VDLAGVRQIRESLPEGT----TVFL-APPSWEELEVRLRGRGTEPHDVVARRLETAKVEM 170

Query: 170 HEK 172
             +
Sbjct: 171 EAR 173


>gi|254568692|ref|XP_002491456.1| Uridylate kinase, catalyzes the seventh enzymatic step in the de
           novo biosynthesis of pyrimidines [Pichia pastoris GS115]
 gi|238031253|emb|CAY69176.1| Uridylate kinase, catalyzes the seventh enzymatic step in the de
           novo biosynthesis of pyrimidines [Pichia pastoris GS115]
 gi|328352034|emb|CCA38433.1| cytidylate kinase [Pichia pastoris CBS 7435]
          Length = 278

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 65/211 (30%), Gaps = 42/211 (19%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T  + L        L   +       RE  G+   E     +    +     
Sbjct: 87  GGPGAGKGTQCAKLVSNYGFVHLSAGDLLRAEQKRE--GSKYGEMISQYIRDGLIVP-QE 143

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A++         E  ++    +GK     RFL   +             +D  +   
Sbjct: 144 VTIALL---------EQAMKENFEKGKT----RFLIDGF----------PRKMDQAKTFE 180

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLD 179
            +      T+  D P  + L+R+  R   S RE    +  +++     E        F  
Sbjct: 181 EKVAKSKVTLFFDCPESVLLERLLKRGQTSGREDDNAESIKKRFKTFVETSMPVVDYF-- 238

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               +  R   V   H    V + +++++ E
Sbjct: 239 ---GKQGRVLKVSCDHPVDQVYSQVVSVLKE 266


>gi|225711304|gb|ACO11498.1| Deoxynucleoside kinase [Caligus rogercresseyi]
          Length = 247

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 22/160 (13%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFGAEA 66
            EG  G+GK+T I + +        D+ V +EP  +        +  L+      +    
Sbjct: 34  VEGPTGSGKSTFIEMFRSR-----PDIFVVQEPLSSWMDVNGTDLFGLMYRDPQRWSGAF 88

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----------SYAYQGERDSSQHL 115
           +    + +RL  V     P      I + +R + S           +        +    
Sbjct: 89  QLH-TSLSRLRSVTEK-TPWGKR--IRILERSIYSERYTFLEHLIKTEVMAKAETALMDK 144

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           + D + +   +++ PD  I L    D+  +R+  R    E
Sbjct: 145 WFDFMVKRFERQMKPDLIIYLRGSNDVFKERILKRGRTEE 184


>gi|218231022|ref|YP_002367232.1| hypothetical protein BCB4264_A2521 [Bacillus cereus B4264]
 gi|218158979|gb|ACK58971.1| hypothetical protein BCB4264_A2521 [Bacillus cereus B4264]
          Length = 189

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 43/219 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59
           N    IS   + G GKTT    LK   +          T +       +         G 
Sbjct: 6   NKTKIISIAAVSGGGKTTITERLKHKFKNSKALYFDSYTFDNSPADICKWI-----DDGA 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +        ++        +E +I+   ++  I+      D  +AY              
Sbjct: 61  NYDEWVLTPLIHD------IEQLIQNNTLDYIIV------DYPFAY-------------- 94

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178
           L     + +  D TI +D P+DI + R   R    +   +D     D+  +    R+ +L
Sbjct: 95  LNSEMRKFI--DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYL 149

Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +     +P+   I+D + S   +   I + V EL ++ V
Sbjct: 150 EAIHTVKPNSDIILDGSLSVSEI---INHAVEELGRREV 185


>gi|229550433|ref|ZP_04439158.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
 gi|307274624|ref|ZP_07555804.1| hypothetical protein HMPREF9521_00251 [Enterococcus faecalis
           TX2134]
 gi|307278900|ref|ZP_07559961.1| hypothetical protein HMPREF9515_01217 [Enterococcus faecalis
           TX0860]
 gi|312952893|ref|ZP_07771753.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
 gi|229304461|gb|EEN70457.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
 gi|306504449|gb|EFM73658.1| hypothetical protein HMPREF9515_01217 [Enterococcus faecalis
           TX0860]
 gi|306508776|gb|EFM77866.1| hypothetical protein HMPREF9521_00251 [Enterococcus faecalis
           TX2134]
 gi|310629141|gb|EFQ12424.1| conserved hypothetical protein [Enterococcus faecalis TX0102]
 gi|315154352|gb|EFT98368.1| conserved hypothetical protein [Enterococcus faecalis TX0031]
 gi|315156586|gb|EFU00603.1| conserved hypothetical protein [Enterococcus faecalis TX0043]
 gi|315158328|gb|EFU02345.1| conserved hypothetical protein [Enterococcus faecalis TX0312]
 gi|315168342|gb|EFU12359.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
 gi|315172098|gb|EFU16115.1| conserved hypothetical protein [Enterococcus faecalis TX1342]
          Length = 188

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + L + L+ +              + +  R  +L    DE G 
Sbjct: 28  KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 77  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151


>gi|229065436|ref|ZP_04200687.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH603]
 gi|228715849|gb|EEL67618.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH603]
          Length = 218

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 17/191 (8%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +       T     +       ++  +   +   
Sbjct: 19  IVI-GISGHGAAGKTTFANKLINQLNQNKVSYINTDPYIVSSNVRKYTNIHYTYQNENHY 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  A   +A  L  +E  ++  +  G     D +   ++ Y      S    +  ++ +
Sbjct: 78  DKMTACHPSAHHLSALERDVQ-MVRAG----LDFYTMDTH-YIKSELISSENKVTIVEGM 131

Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           SV  + P   D  I      +  L R  +R  +   A ++Y  +     HE+RR  +   
Sbjct: 132 SVAFINPNLFDLKIYFYTDGETELMRRSSRDIIERGADINYLRKS----HEERRIQYEVF 187

Query: 181 ARNQPDRCHIV 191
                 R  I+
Sbjct: 188 MHQYSQRFDII 198


>gi|170700049|ref|ZP_02891073.1| KAP P-loop domain protein [Burkholderia ambifaria IOP40-10]
 gi|170135064|gb|EDT03368.1| KAP P-loop domain protein [Burkholderia ambifaria IOP40-10]
          Length = 727

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLL 55
          + G+ I  EG  G+GKTT +  +   L+R      + V   P     A+A    LL
Sbjct: 40 SPGIVIGIEGPWGSGKTTVVRYIVESLKRSAGEPPIVVEFNPWMLAGADALVEALL 95


>gi|118592492|ref|ZP_01549883.1| ABC transporter, nucleotide binding/ATPase protein
          (glycerol-3-phosphate) [Stappia aggregata IAM 12614]
 gi|118434839|gb|EAV41489.1| ABC transporter, nucleotide binding/ATPase protein
          (glycerol-3-phosphate) [Stappia aggregata IAM 12614]
          Length = 342

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M +G FI   G  G GK+T + L+ 
Sbjct: 27 MRAGEFIVIVGPSGCGKSTLLRLIA 51


>gi|89098341|ref|ZP_01171225.1| adenylylsulfate kinase [Bacillus sp. NRRL B-14911]
 gi|89086890|gb|EAR66007.1| adenylylsulfate kinase [Bacillus sp. NRRL B-14911]
          Length = 212

 Score = 39.6 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++  L ++    +                 LL       G     
Sbjct: 39  FTGLSGSGKSTIANAVQAMLFKRGIQAY-----------------LLDGDNLRHGINGNL 81

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R +++     + +     G ++L      S  +            +D  + I  
Sbjct: 82  SFSQEDRKENIRRTAEMAKLFSDAGFVVLA-----SLISPYKADRKMARELMDEGEFIE- 135

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D PV+   KR
Sbjct: 136 --------IYIDCPVEECEKR 148


>gi|296816587|ref|XP_002848630.1| adenylyl-sulfate kinase [Arthroderma otae CBS 113480]
 gi|238839083|gb|EEQ28745.1| adenylyl-sulfate kinase [Arthroderma otae CBS 113480]
          Length = 354

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 18/139 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F GI G+GK+T    L+  L  K                +  R  L            E 
Sbjct: 30  FTGISGSGKSTIAVALEHELVEKRKLAAF------RLDGDNIRAGLNKGLGFTPQDRTE- 82

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEISVQE 127
                  +  +  V +     G I +      S YA   +RD+++ L  L   ++ S + 
Sbjct: 83  ------NIRRIGEVAKLFADSGAIAIT--SFISPYA--ADRDAARKLHDLSPAEKESGET 132

Query: 128 VMPDCTIILDLPVDIGLKR 146
            +P   + +D+P+++ + R
Sbjct: 133 PLPFIEVYIDVPLEVAMDR 151


>gi|299820567|ref|ZP_07052457.1| deoxyguanosine kinase [Listeria grayi DSM 20601]
 gi|299818062|gb|EFI85296.1| deoxyguanosine kinase [Listeria grayi DSM 20601]
          Length = 207

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 27/162 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ GAGK+++  LL   L+ K                E   + LL    +    + 
Sbjct: 4   IVLAGMIGAGKSSYTELLASSLESK------------AFYEEIQDNALLEKFYE--DPKR 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-----SSYAYQGERDS--SQHLFLDS 119
            A       L+     I+ AL +   +L DR +      +   Y+    S      +LD 
Sbjct: 50  WAFALQIYFLNTRFRSIKAALTDKHNVL-DRSIYEDALFTQINYENGNMSKAEMATYLDL 108

Query: 120 LQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           L  +      + +  PD  I L   +D  L R++ R    E 
Sbjct: 109 LSNMMEELDGMPKKAPDLLIYLRGSLDTVLTRIKKRGRSYEQ 150


>gi|227819423|ref|YP_002823394.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase [Sinorhizobium fredii NGR234]
 gi|227338422|gb|ACP22641.1| NodQ bifunctional enzyme [Sinorhizobium fredii NGR234]
          Length = 633

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L R L  +    +                 +L       G   + 
Sbjct: 465 FTGLSGSGKSTIANALDRLLHARGKHTY-----------------MLDGDNVRHGLNRDL 507

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +     G I+L      S  +            ++  + I  
Sbjct: 508 GFTEADRVENIRRVAEVAKLMADAGLIVLV-----SFISPFRGERRMARELMEEGEFIE- 561

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P++   +R
Sbjct: 562 --------IFVDTPLEECARR 574


>gi|147836529|emb|CAN62091.1| hypothetical protein VITISV_013038 [Vitis vinifera]
          Length = 233

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 67/229 (29%), Gaps = 66/229 (28%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVH---------VTREPGGTP--AAEAARHVLLS 56
           G+ G   +GK+T  +L     +     V          + +  GG     A     +LL 
Sbjct: 5   GLTGGIASGKSTVSNL----FKVHGIPVVDADRVARDVLKKGSGGWRKVVAAFGNEILLD 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-------------KILLCDRFLDSSY 103
            G  +     + +     +   +   + P +  G             K+++ D       
Sbjct: 61  NGEVDRAKLGQIVFSDPGKRQLLNRPLAPFISSGIFWEVSKLWMKGFKVIVLD------- 113

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                      LF   +         P   +   +  +  L+R+  R    E    +   
Sbjct: 114 --------VPLLFEAKMNGW----TKPIIVVW--VDPETQLQRLLARDRTSEEDARNRIN 159

Query: 164 -RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +  +          L  ++       ++D+  S + +     N+++++
Sbjct: 160 AQMSLD---------LKRSKAD----IVIDNTGSLEDLNELFQNVLFQV 195


>gi|146387602|pdb|2OFW|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
 gi|146387603|pdb|2OFW|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
 gi|146387604|pdb|2OFW|C Chain C, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
 gi|146387605|pdb|2OFW|D Chain D, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
 gi|146387606|pdb|2OFW|E Chain E, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
 gi|146387607|pdb|2OFW|F Chain F, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
 gi|146387608|pdb|2OFW|G Chain G, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
 gi|146387609|pdb|2OFW|H Chain H, Crystal Structure Of The Apsk Domain Of Human Papss1
           Complexed With 2 Aps Molecules
          Length = 208

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 26/144 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I   G+ GAGKTT    L+ +L            P  T   +  R  L       F
Sbjct: 32  RGCTIWLTGLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGF 82

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             E         R ++V  +   A +         F D+         S      ++ ++
Sbjct: 83  SPE--------DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQ 125

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146
           I     +P   + +D P+ +  +R
Sbjct: 126 IHEGASLPFFEVFVDAPLHVCEQR 149


>gi|145591970|ref|YP_001153972.1| GTP-binding signal recognition particle [Pyrobaculum arsenaticum
           DSM 13514]
 gi|158514165|sp|A4WLQ3|SRP54_PYRAR RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|145283738|gb|ABP51320.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 433

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53
           G+EG+GKTT  + L R+L ++ Y V +       PAA +  R +
Sbjct: 106 GVEGSGKTTTSAKLARYLMKRGYKVGMVETDTIRPAAFDQLRQL 149


>gi|158319813|ref|YP_001512320.1| phosphotransferase (aminonucleoside antibiotic resistance)
          [Alkaliphilus oremlandii OhILAs]
 gi|158140012|gb|ABW18324.1| phosphotransferase (aminonucleoside antibiotic resistance)
          [Alkaliphilus oremlandii OhILAs]
          Length = 192

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 13/94 (13%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
          + G+FI   GI  +GK+T   LL      K   VH           +  R ++++   + 
Sbjct: 15 SKGIFI-ITGIMASGKSTVAQLLAERFP-KGVHVH----------GDIYRKMVVAGREEM 62

Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
                EA+     R     +        G  ++
Sbjct: 63 SPNPSEEALNQLDLRYKLAASTADAYFEAGFNVV 96


>gi|91202977|emb|CAJ72616.1| strongly similar to cytidylate kinase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 223

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 79/244 (32%), Gaps = 53/244 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ +G  G+GK+T    L + L         T            R +           
Sbjct: 1   MIIAIDGPAGSGKSTVAKTLAKHL---GIRYLDT--------GAMYRALTWKAMQHNVNL 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD-R---------FLDSSYAYQGERDSSQH 114
           + E    A  R+     +   +  +G  +  D R          + ++  +   +   + 
Sbjct: 50  DDE---NALCRIMEQTQIYFESEEKGLQVFVDGRNVTKEIRSPSVTNNTHHISGKPGVRA 106

Query: 115 LFLDSLQEISVQE--------------VMPDCTIILDLPVDI-GLKRVQNRYSLRESACL 159
           + ++  ++I+ +                  +    LD  ++I   +R + R +      L
Sbjct: 107 MLVNLQRKIASKGNTVAEGRDIGTVVFPQAEKKFFLDARIEIRAKRRFRERETPDNENSL 166

Query: 160 DYFERKDVMIHEK--RRQIFLDIARNQPDRC----HIVDSA-HSFQSVATNILNIVWELV 212
           D   R+  +  ++   R       ++ P +       +D+   +   V   I+  V  L+
Sbjct: 167 DSVIREIALRDQRDTTR-------KDSPLKISDDSIYIDTTNLTLNEVIHRIIKEVNPLI 219

Query: 213 QKRV 216
           + +V
Sbjct: 220 KNKV 223


>gi|296195827|ref|XP_002745557.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1 [Callithrix jacchus]
          Length = 624

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|295399492|ref|ZP_06809474.1| dephospho-CoA kinase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294978958|gb|EFG54554.1| dephospho-CoA kinase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 199

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 74/211 (35%), Gaps = 30/211 (14%)

Query: 11  GIEG---AGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVD 60
           G+ G   +GK+T   +++          +   DV    E       +A  + +L   G  
Sbjct: 6   GLTGGIASGKSTVTKMIRELGIPVIDADQIARDVVKMGEEAYNQIIQAFGQEILQEDGEI 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +       +         +  ++ PA+ +       R L    AY  +   +  L +  L
Sbjct: 66  DRAKLGAIVFHNEQERKKLNAIVHPAVRQ-------RMLAEKEAYVQKGAKTVVLDIPLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E  +  ++ D TI++ +  D+ L+R+  R    +   L    +  + + EK ++     
Sbjct: 119 FESELTHLV-DKTIVVYVDDDVQLERLMKRNGFSKEEALARI-QAQMPLREKVKK----- 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A        ++D+  + +     +  I    
Sbjct: 172 ADA------VIDNNGTIEETKQQLWQIFKRW 196


>gi|260899650|ref|ZP_05908045.1| cell division protein FtsY [Vibrio parahaemolyticus AQ4037]
 gi|308106736|gb|EFO44276.1| cell division protein FtsY [Vibrio parahaemolyticus AQ4037]
          Length = 411

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 214 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 269

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 270 TGADSASVIYDAIEAAKARGVDVVIAD 296


>gi|260361295|ref|ZP_05774400.1| cell division protein FtsY [Vibrio parahaemolyticus K5030]
 gi|308111830|gb|EFO49370.1| cell division protein FtsY [Vibrio parahaemolyticus K5030]
          Length = 407

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 210 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 265

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 266 TGADSASVIYDAIEAAKARGVDVVIAD 292


>gi|229136365|ref|ZP_04265100.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BDRD-ST196]
 gi|228647098|gb|EEL03198.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BDRD-ST196]
          Length = 218

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 17/191 (8%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +       T     +       ++  +   +   
Sbjct: 19  IVI-GISGHGAAGKTTFANKLINQLNQNKVSYINTDPYIVSSNVRKYTNIHYTYQNENHY 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  A   +A  L  +E  ++  +  G     D +   ++ Y      S    +  ++ +
Sbjct: 78  DKMTACHPSAHHLSALERDVQ-MVRAG----LDFYTMDTH-YIKSELISSKNKVTIVEGM 131

Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           SV  + P   D  I      +  L R  +R  +   A ++Y  +     HE+RR  +   
Sbjct: 132 SVAFINPNLFDLKIYFYTDGETELMRRSSRDIIERGADINYLRKS----HEERRIQYEVF 187

Query: 181 ARNQPDRCHIV 191
                 R  I+
Sbjct: 188 MHQYSQRFDII 198


>gi|225181320|ref|ZP_03734764.1| Guanylate kinase [Dethiobacter alkaliphilus AHT 1]
 gi|225167901|gb|EEG76708.1| Guanylate kinase [Dethiobacter alkaliphilus AHT 1]
          Length = 205

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 28/168 (16%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M   GL I   G  GAGK T    L          V   TR+P            +    
Sbjct: 1   MTRQGLLIVISGPSGAGKGTVCRALLEKCPELVLSVSKTTRQPRAGEEDGVNYFFVSRED 60

Query: 59  VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
            ++  A  + + +A     +     + +   L +G+ ++ +  +D+    QG        
Sbjct: 61  FEDSIANGDFLEYAYVYGQYYGTPRSTVENLLNDGRDVILE--IDT----QGA------- 107

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDY 161
            +  ++  S          I  +P   +    R+ NR +  E   L+ 
Sbjct: 108 -MKVMEAFSAG------IFIFLMPPSGEELRSRIINRGTESE-ESLNR 147


>gi|225025030|ref|ZP_03714222.1| hypothetical protein EIKCOROL_01919 [Eikenella corrodens ATCC
           23834]
 gi|224942260|gb|EEG23469.1| hypothetical protein EIKCOROL_01919 [Eikenella corrodens ATCC
           23834]
          Length = 480

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +      +     ++A  
Sbjct: 288 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLAEWGERNGVTVISQA-- 343

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
            +        + +  A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 344 -SGDSAAVCFDAVEAAKARGIDIVLAD---------TAGRLPTQTHLMEEIKKVKRVLQK 393

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 394 SMPDAPHEIVVVLD 407


>gi|162149007|ref|YP_001603468.1| putative sulfate adenylyltransferase subunit 1 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787584|emb|CAP57180.1| putative sulfate adenylyltransferase subunit 1 [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 635

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 24/116 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T     +  L  +  D+                  +L       G  A+   
Sbjct: 463 GLPGAGKSTIARAAESRLFAQGIDI-----------------SVLDGDTLRAGLCADLGF 505

Query: 71  FAAARLDHVEN---VIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDS 119
             A R ++V     V R     G+++    +  R  D   A Q   D  + +F+D+
Sbjct: 506 SEADRTENVRRAAAVARILAETGQVVLVALISPRTADRDLARQIVGDGFREIFIDA 561


>gi|156937759|ref|YP_001435555.1| adenylylsulfate kinase [Ignicoccus hospitalis KIN4/I]
 gi|156566743|gb|ABU82148.1| adenylylsulfate kinase [Ignicoccus hospitalis KIN4/I]
          Length = 179

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 19/86 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ G+GKTT    + + L    Y V V          +  R  +     D    + E   
Sbjct: 14 GLPGSGKTTLAKRVAKKLSEMGYRVEVL-------DGDWVRKTI---NPDAGFTKEE--- 60

Query: 71 FAAARLDHVENV--IRPALMEGKILL 94
              R  H++ V  I   L    +++
Sbjct: 61 ----RALHLKRVAWIARLLARNGVVV 82


>gi|153840071|ref|ZP_01992738.1| cell division protein FtsY [Vibrio parahaemolyticus AQ3810]
 gi|149746343|gb|EDM57398.1| cell division protein FtsY [Vibrio parahaemolyticus AQ3810]
          Length = 403

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 206 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 261

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 262 TGADSASVIYDAIEAAKARGVDVVIAD 288


>gi|116283813|gb|AAH32513.1| PAPSS1 protein [Homo sapiens]
          Length = 571

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|104641467|gb|ABF73024.1| plastid adenylate kinase protein precursor, C-terminal part
           [Karenia brevis]
          Length = 209

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 21/104 (20%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESA-------------CLDYFERKDVMIHE---KRR-QI 176
           I+ DLP DI + R   R +   +               +    R+D    E   + R ++
Sbjct: 39  ILFDLPEDISVSRAMGRLNDPVTGEIYHLKFKPPPADAIARLVRRDNDAKEEVVRTRLKV 98

Query: 177 FLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           + +    I     D+  ++D++   + +   +   + + +  ++
Sbjct: 99  YHEHLSGIIELYKDKLVVIDASCKIEEITATVAERLIQALVSKI 142


>gi|91217479|ref|ZP_01254438.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Psychroflexus
           torquis ATCC 700755]
 gi|91184364|gb|EAS70748.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Psychroflexus
           torquis ATCC 700755]
          Length = 381

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 55/191 (28%), Gaps = 22/191 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  G+GKT+   ++      K         P      E             F  E
Sbjct: 179 YLTIEGNIGSGKTSLAEMIAEDFNGKLILERFKDNPFLPKFYE-------DQARFAFPLE 231

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123
                F A R   + + I    +     + D   + S  +           L       +
Sbjct: 232 MS---FLADRHKQLMDDISQLDLFSDFAISDYNPNKSLIFSKVTLQEDEYALYKKIFNIM 288

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182
                 PD  + L    +  LK +Q R    E     DY          +  + +L+   
Sbjct: 289 YSDVPKPDVYVYLYQNTERLLKNIQKRGRDYEQNISPDYL--------RRIHEGYLNFFN 340

Query: 183 NQPDR-CHIVD 192
           +Q      I+D
Sbjct: 341 SQNKIDVKIID 351


>gi|22297728|ref|NP_680975.1| excinuclease ABC subunit A [Thermosynechococcus elongatus BP-1]
 gi|22293905|dbj|BAC07737.1| excinuclease ABC subunit A [Thermosynechococcus elongatus BP-1]
          Length = 949

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVL 54
           G  +   G+ G+GK+T +  +L   LQ    Y+V + +E G      A   V+
Sbjct: 635 GKLVCLTGVSGSGKSTLMHEVLYPALQHHLGYNVPLPKELGHIEGLNAIDKVI 687


>gi|28899730|ref|NP_799335.1| cell division protein FtsY [Vibrio parahaemolyticus RIMD 2210633]
 gi|260879107|ref|ZP_05891462.1| cell division protein FtsY [Vibrio parahaemolyticus AN-5034]
 gi|260897983|ref|ZP_05906479.1| cell division protein FtsY [Vibrio parahaemolyticus Peru-466]
 gi|28807982|dbj|BAC61219.1| cell division protein FtsY [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087163|gb|EFO36858.1| cell division protein FtsY [Vibrio parahaemolyticus Peru-466]
 gi|308089649|gb|EFO39344.1| cell division protein FtsY [Vibrio parahaemolyticus AN-5034]
          Length = 405

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 208 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 263

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 264 TGADSASVIYDAIEAAKARGVDVVIAD 290


>gi|323467489|gb|ADX71176.1| Deoxyguanosine kinase [Lactobacillus helveticus H10]
          Length = 229

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 35/170 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 5   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 48

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113
           +  A +     L+   + I+ AL E   +L DR +   +  +Q   D  +          
Sbjct: 49  KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 107

Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
              H  ++ L+ +  +   PD  + +++  D  +KR++ R    E    D
Sbjct: 108 ELLHNMMNELERMPKKN--PDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 155


>gi|321313682|ref|YP_004205969.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis BSn5]
 gi|320019956|gb|ADV94942.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis BSn5]
          Length = 217

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    +   +  E    P  E   H       + +    
Sbjct: 12  ITVAGTVGVGKSTLTKTLAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119
           +   F A R        +     G   + DR  + D+       A +G      +    S
Sbjct: 63  QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTS 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175
           L E   ++     PD  I L+  ++  L R++ R    E      Y+E     +H +   
Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWE----EMHTRYEN 173

Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
               F    + + + +   +++  +S + +   I +++ +
Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDENSIEHIVDQIASVIHD 213


>gi|291530581|emb|CBK96166.1| ABC-type multidrug transport system, ATPase and permease components
           [Eubacterium siraeum 70/3]
          Length = 583

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDV------HVTREPGGTPAAEAARHV 53
            SG  I+  G  G GKTT I+LL RF    +    V       VTR+          +  
Sbjct: 369 KSGQQIAIVGPTGCGKTTIINLLMRFYDTDKGGISVDGNNIKDVTRDSLRLSYGMVLQET 428

Query: 54  LLSCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            +  G              E  + AAA+  H  + I+        ++ D
Sbjct: 429 WIFDGTVRENIAYGKQDATEEEIVAAAKAAHCHSFIKRMKDGYDTIISD 477


>gi|260774826|ref|ZP_05883728.1| signal recognition particle receptor protein FtsY [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260609251|gb|EEX35406.1| signal recognition particle receptor protein FtsY [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 411

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 214 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVVAQH-- 269

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A  +G  +++ D
Sbjct: 270 TGADSASVIYDAIESAKAKGVDVVIAD 296


>gi|257085665|ref|ZP_05580026.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256993695|gb|EEU80997.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 176

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    DE G 
Sbjct: 16  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 65  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 110 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 139


>gi|237736970|ref|ZP_04567451.1| ATP-binding protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420832|gb|EEO35879.1| ATP-binding protein [Fusobacterium mortiferum ATCC 9817]
          Length = 285

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 11/103 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCG 58
          M+    +   G+ G+GKTT +++    L+   Y     +  E G    + +   + L   
Sbjct: 1  MSKKKIVIVTGLSGSGKTTALNV----LEDMGYYTVDNLPCEIGIPFISSSIEKIALGMD 56

Query: 59 VDEFGAEAEAIVFAAARL---DHVENVIRPALMEGKILLCDRF 98
          +  F    E   F        D + ++I   L   K ++ +R+
Sbjct: 57 IRSFKKIEEFTNFLKDLRGNPDVICSII--FLQASKEVILNRY 97


>gi|221632918|ref|YP_002522140.1| 3-dehydroquinate synthase [Thermomicrobium roseum DSM 5159]
 gi|221155440|gb|ACM04567.1| 3-dehydroquinate synthase [Thermomicrobium roseum DSM 5159]
          Length = 562

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 46/211 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G+ G+GK++   L+   L    + V  T              +    G   F A  
Sbjct: 5   IALIGLSGSGKSSIAPLVADLL---GWRVVDTDRLVEERFGLPIAEIFARYGESVFRAAE 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHLFLDSLQ 121
              +  A+  +HV          G I+L DR       +++  +   R       +D L 
Sbjct: 62  REALLQASLAEHVV-----IATGGGIVLDDRNWIPLRTETALVHLRARI---ETLVDRLH 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             S +E+ P  T+               R  L           K   + ++RR ++   A
Sbjct: 114 RQSERELQP--TV---------------RPLLAGDTA-----AKLQELWQRRRALYEQ-A 150

Query: 182 RNQPDRCHIVDSAHS-FQSVATNILNIVWEL 211
                   ++D+     + +A  I+  V EL
Sbjct: 151 D------VVIDTDDEAPEEIAQRIVEAVREL 175


>gi|74002091|ref|XP_863123.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthethase 1 (PAPS synthethase 1)
           (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 6
           [Canis familiaris]
          Length = 636

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 60  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 154 FFEVFVDAPLHVCEQR 169


>gi|13470572|ref|NP_102141.1| adenylate kinase [Mesorhizobium loti MAFF303099]
 gi|20138506|sp|Q98N36|KAD_RHILO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|14021314|dbj|BAB47927.1| adenylate kinase [Mesorhizobium loti MAFF303099]
          Length = 198

 Score = 39.6 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 31/214 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L     +       T         +  R  + +    E G  A+A++
Sbjct: 7   GPPGAGKGTQAQRLVE---KHGIPQLST--------GDMLRAAVQAGS--EVGKRAKAVM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE-ISVQE 127
                 + V + I  A      ++ +R   +  A     D      +  D+++  +S + 
Sbjct: 54  ---DAGELVSDAIVNA------IVAERIDQADCAKGFILDGYPRTLVQADAVESMLSERG 104

Query: 128 VMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN--- 183
           +  D  I L +     + R+  R    + +      +    +  E+ R+ +   A     
Sbjct: 105 IGLDTVIELVVDDRALVGRIVKRAEDAKAAGQPVRKDDNPAVFEERLREYYKKTAPLTGY 164

Query: 184 --QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                +   VD   S  +V   I  ++    + R
Sbjct: 165 YYAKGKLKTVDGLASIDAVTNEIEAVLTAAAEAR 198


>gi|325118399|emb|CBZ53950.1| MGC78790 protein, related [Neospora caninum Liverpool]
          Length = 1387

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 69/206 (33%), Gaps = 35/206 (16%)

Query: 15  AGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           +GK T    +         ++     +E     A       ++  G +   A  EA ++ 
Sbjct: 539 SGKQTLSKRIADETGFVALSFKDVAAKEIASKSALGQLLEPIVRVG-EMPPASVEARLWK 597

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           +A L+H  N         ++++      S  + +  +   + L             +P  
Sbjct: 598 SAFLEHSGN--------NRVVI----TSSRLSLERAKSLDREL-----------GGVPAL 634

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            + +  P ++ + R     +L     +D    + +      ++ +  +      +  +VD
Sbjct: 635 VVFIGCPRELLVSRAAKAGALAHVEQID----ESLQHLADVKEYYQRL-----GKVFVVD 685

Query: 193 SAHSFQSVATNILNIVWELVQKRVSP 218
            A S   +   + ++   +V   ++P
Sbjct: 686 GALSAAEMFQQVRHLFLPVVTYLLAP 711


>gi|330845405|ref|XP_003294578.1| hypothetical protein DICPUDRAFT_159601 [Dictyostelium purpureum]
 gi|325074940|gb|EGC28901.1| hypothetical protein DICPUDRAFT_159601 [Dictyostelium purpureum]
          Length = 470

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 33/154 (21%)

Query: 79  VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE------ISVQEVMP-- 130
           +E + +P    G  ++ D F  ++   Q E  +S +  +  +++      I+     P  
Sbjct: 180 LEELRKPEYRSG--VVVDGFPRTTI--QVELANSLYEKMKEMRKAFFNTPIAHGFPRPIF 235

Query: 131 DCTIILDLPVDIGLKRVQNRYSLR-------ESACLDYFERKDVMIHE----KRRQIFLD 179
             T++  +     + R   R  +        +   L   E +D  + E    KR +IF D
Sbjct: 236 RVTVLF-VEEKESIDRQLRRGEITRDTNKKLKEQGLPLLEERDTDLSEEAARKRYKIFRD 294

Query: 180 -------IARNQPDRCHIVDSAHSFQSVATNILN 206
                  + ++ P    I+D++ +   V   IL 
Sbjct: 295 HYSTLQTLKKHFP--FSIIDASKTLDKVQQAILK 326


>gi|307595888|ref|YP_003902205.1| hypothetical protein Vdis_1780 [Vulcanisaeta distributa DSM 14429]
 gi|307551089|gb|ADN51154.1| protein of unknown function ATP binding protein [Vulcanisaeta
           distributa DSM 14429]
          Length = 256

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 15/102 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----------RHVL 54
           FI   G  G+GKTT +S    +L+   YDV +                        R ++
Sbjct: 5   FIV--GTAGSGKTTLVSTFAEWLENNQYDVAIVNLDPAVEYVPYIPDIDIRDVVSARELM 62

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   G+   AI   A R   +++ I         +L D
Sbjct: 63  RKYKLGPNGSIIAAIDMLAVRAQEIKSQIMDIGAN--YVLID 102


>gi|302853892|ref|XP_002958458.1| hypothetical protein VOLCADRAFT_33236 [Volvox carteri f.
           nagariensis]
 gi|300256186|gb|EFJ40458.1| hypothetical protein VOLCADRAFT_33236 [Volvox carteri f.
           nagariensis]
          Length = 183

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 21/185 (11%)

Query: 8   SFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPG--GTPAAEAARHVL----LSCGVD 60
           S EG   AGK+T +S+L R L   K +     +EP         ++ ++L          
Sbjct: 2   SVEGNISAGKSTFLSILNRHLLTDKGFS--FVKEPIEKWQSVGGSSVNLLDLFYRDPARM 59

Query: 61  EFGAEAEAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +  +    +       +   N  +  L+E + +  DR +     +     +   L +  
Sbjct: 60  AYTFQNFVFLTRVLQERETYGNASKARLLE-RSVFSDRMVFVRAVHASLDLADHELAIYD 118

Query: 120 LQEISVQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESA-CLDYF-----ERKDVMI 169
                +   +P       I L    +  + R++ R    E    LDY        +D ++
Sbjct: 119 AWFGPILASLPTLVPNGLIYLRASPNTCMARLRKRARSEEGGIPLDYLKVLHNNHEDWLL 178

Query: 170 HEKRR 174
           H   R
Sbjct: 179 HAATR 183


>gi|291000372|ref|XP_002682753.1| predicted protein [Naegleria gruberi]
 gi|284096381|gb|EFC50009.1| predicted protein [Naegleria gruberi]
          Length = 506

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 11/203 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G   AGK++ ++ L+  LQ   + V +  E         A+    S   D    E+
Sbjct: 144 VVLTGGPCAGKSSAMTKLRERLQNLGFQVFIIPEAATLLMTGGAKVTDNSSVEDVLAFES 203

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             I    A  D+ + + R +  +  ILLCDR      AY  +      + ++      ++
Sbjct: 204 SLIKTQMAIEDNFQEIARVS-KKPTILLCDRGTLDPKAYMADDLWQALMDMNGWSIPMLR 262

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIARNQP 185
           +   DC I L +   IG    +  Y+L  +    +  E+   + H + R  ++       
Sbjct: 263 DKRYDCVIHL-VTTAIG---AEKFYTLENNTVRTETIEQARELDH-RLRASYI----GHS 313

Query: 186 DRCHIVDSAHSFQSVATNILNIV 208
               + ++ +SF      + NI+
Sbjct: 314 QLYIVDNAVNSFDEKLQKVYNIL 336


>gi|156972628|ref|YP_001443535.1| signal recognition particle GTPase [Vibrio harveyi ATCC BAA-1116]
 gi|156524222|gb|ABU69308.1| hypothetical protein VIBHAR_00280 [Vibrio harveyi ATCC BAA-1116]
          Length = 408

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 211 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 266

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 267 TGADSASVIYDAIEAAKARGVDVVIAD 293


>gi|319937180|ref|ZP_08011587.1| guanylate kinase [Coprobacillus sp. 29_1]
 gi|319807546|gb|EFW04139.1| guanylate kinase [Coprobacillus sp. 29_1]
          Length = 190

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 54/179 (30%), Gaps = 29/179 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             GL I   G  G GK T    L     L         TR+P            +     
Sbjct: 6   KKGLLIILSGPSGVGKGTVRQELFKDESLNLAYSISMTTRKPRPAETDGVDYFFVSEEEF 65

Query: 60  DEFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            +     E + +A    ++       +   L EGK ++ +  ++   A Q          
Sbjct: 66  KQRIENNELLEYAQFVGNYYGTPKFYVEKLLDEGKNVVLE--IEVQGALQVMARC----- 118

Query: 117 LDSLQEISVQEVMPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                        PD  TI L +P   +   +R++ R +  E    +  ++    I  K
Sbjct: 119 -------------PDALTIFL-VPPSFEELERRIRGRRTEAEDVVRERLDKASKEIATK 163


>gi|312212380|emb|CBX92463.1| similar to adenylylsulfate kinase [Leptosphaeria maculans]
          Length = 207

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 46/151 (30%), Gaps = 33/151 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I F G+  +GK+T  + L++ L    Y  +                  L      
Sbjct: 22  QKGFTIWFTGLSASGKSTIATALEQHLLHLGYAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERD--SSQHLFLD 118
           FG   +       R +++  +   A +         F DSS  A                
Sbjct: 65  FGLNKDLGFTEKDRNENIRRIAEVAKL---------FADSSTIAITSFISPYKKDRATAR 115

Query: 119 SLQEISVQEVMPDCTI---ILDLPVDIGLKR 146
            L  I+  +  P        +DLP+++   R
Sbjct: 116 ELHAITTGDDEP-LAFVEVFVDLPLEVAEAR 145


>gi|301763136|ref|XP_002916986.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1-like [Ailuropoda melanoleuca]
          Length = 624

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|256618654|ref|ZP_05475500.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|257089484|ref|ZP_05583845.1| predicted protein [Enterococcus faecalis CH188]
 gi|256598181|gb|EEU17357.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256998296|gb|EEU84816.1| predicted protein [Enterococcus faecalis CH188]
          Length = 177

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    DE G 
Sbjct: 17  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 66  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140


>gi|256075822|ref|XP_002574215.1| hypothetical protein [Schistosoma mansoni]
 gi|238659414|emb|CAZ30448.1| hypothetical protein Smp_027740 [Schistosoma mansoni]
          Length = 116

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 80  ENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEISVQEVMPDCTIILDL 138
           ++ I  AL  G  ++ DR+  S  A    +            + +    + PD   I  L
Sbjct: 35  QDEISSALKAGISVVVDRYSYSGIANTAAKFHPLSEFDWKWCRSMEYGLLQPD--FIFCL 92

Query: 139 PVD 141
             +
Sbjct: 93  APE 95


>gi|74002087|ref|XP_863076.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthethase 1 (PAPS synthethase 1)
           (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 4
           [Canis familiaris]
          Length = 636

 Score = 39.6 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 60  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 154 FFEVFVDAPLHVCEQR 169


>gi|325294335|ref|YP_004280849.1| signal recognition particle protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064783|gb|ADY72790.1| signal recognition particle protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 448

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 13/125 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L  +L+++   V +T      PAA     + L    D+ G      V
Sbjct: 106 GLQGSGKTTTAAKLANYLKKQGKRVLLTSVDVYRPAA----MLQLKKLGDQIG----IPV 157

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           F   +      + + AL++ K    D   D        R       L+  ++I  +EV+P
Sbjct: 158 FLEEKEKDAVKIAKDALLKAK----DESYDVLVVDTAGRLHIDEELLEEARKI-KEEVVP 212

Query: 131 DCTII 135
           D T+ 
Sbjct: 213 DETLF 217


>gi|260438012|ref|ZP_05791828.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM
           2876]
 gi|292809492|gb|EFF68697.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM
           2876]
          Length = 451

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 15/107 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-----AEAARHV---- 53
            G FI   G+ G+GKTT +  LK + +     V   + P           E A ++    
Sbjct: 11  KGNFILVCGMTGSGKTTLLKKLKEYFKDNAMMV--MQNPDNQIIMDSVYGELAVNLSGKG 68

Query: 54  LLSCGVDEFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCD 96
           L    +    AE  +          R D +    +  L    ++ CD
Sbjct: 69  LKDDFIKRRIAETASFFSLSHMFDKRTDSLSGGEKQILNLASVIACD 115


>gi|134082621|emb|CAK42515.1| hypothetical protein An15g05620 [Aspergillus niger]
          Length = 292

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 16/124 (12%)

Query: 14  GAGKTTHISLL--KRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GAGK+T   L+     L            +   T  ++    ++ + G +    + E  +
Sbjct: 33  GAGKSTLTELITGAEGLSNGGIHSSTDLCQIFDTTISKEEYFIVDTPGFEP-NNKGEIFL 91

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                L  +    +P  + G       +L ++Y  Q   D      +  L     Q   P
Sbjct: 92  QVTEMLQQL----QPNSIFGIW-----YLVNNYTRQ---DGFDREMVAWLTSFCGQSFCP 139

Query: 131 DCTI 134
           D TI
Sbjct: 140 DVTI 143


>gi|114765344|ref|ZP_01444461.1| guanylate kinase [Pelagibaca bermudensis HTCC2601]
 gi|114542324|gb|EAU45353.1| guanylate kinase [Roseovarius sp. HTCC2601]
          Length = 213

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 60/172 (34%), Gaps = 34/172 (19%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           MN  GL I      GAGK+T    L+ +     + V   TR P          H +    
Sbjct: 1   MNRRGLLIILSSPSGAGKSTLAKRLREWDPSVIFSVSATTRAPRTGEVDGEDYHFMTEAA 60

Query: 59  VDEFGAEAEAIVFAAARLDHV--------ENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
             +  A  E +  A     HV        +  +R A+++GK +L D        +QG + 
Sbjct: 61  FKKAVANGEMLEHA-----HVFGNFYGSPKGPVRDAIIDGKDVLFD------IDWQGAQQ 109

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDY 161
            +         E+++       +I L LP  I  LKR            +D 
Sbjct: 110 MTN-------SELALHT----LSIFL-LPPSIAELKRRLESRGQDGPEVIDR 149


>gi|320335405|ref|YP_004172116.1| Deoxyadenosine kinase [Deinococcus maricopensis DSM 21211]
 gi|319756694|gb|ADV68451.1| Deoxyadenosine kinase [Deinococcus maricopensis DSM 21211]
          Length = 207

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 30/170 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDE 61
           ++++  G  G+GK+T   +L     +   +         P         R       V  
Sbjct: 1   MYLAVSGNIGSGKSTLTGMLAE---KYGLNAVYEPFEENPYLQDFYGDMRRFAFHSQVFF 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSS-YAY--QGERDSSQHL 115
                E          H+  V       G   ++ DR  F D++ +A             
Sbjct: 58  LSKRLE---------QHLRVV------NGAPHVIQDRTVFEDANIFARNLHAGGHMDDRD 102

Query: 116 FLDSLQEIS--VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +   L      +  +  PD  + +D  +     R+  R    E A  D +
Sbjct: 103 WRTYLGLFEGILPALRTPDLLVHIDASLPTLRARIGRRGRTYEQAIPDAY 152


>gi|258542257|ref|YP_003187690.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633335|dbj|BAH99310.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636394|dbj|BAI02363.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639447|dbj|BAI05409.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642503|dbj|BAI08458.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645558|dbj|BAI11506.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648611|dbj|BAI14552.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651664|dbj|BAI17598.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654655|dbj|BAI20582.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO
           3283-12]
          Length = 626

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 32/120 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T     +  L     DV                  +L       G   +   
Sbjct: 454 GLSGSGKSTLARAAETRLFADGVDVT-----------------VLDGDTLRAGLCKDLGF 496

Query: 71  FAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQHLFLDS 119
             A R ++V     V R     G++++         DR      A Q   D  + +F+D+
Sbjct: 497 SEADRTENVRRAAEVARLLRDAGQVVIVALISPLRSDR----DLARQIIGDGFEEVFVDA 552


>gi|255535670|ref|YP_003096041.1| Deoxyadenosine kinase [Flavobacteriaceae bacterium 3519-10]
 gi|255341866|gb|ACU07979.1| Deoxyadenosine kinase [Flavobacteriaceae bacterium 3519-10]
          Length = 204

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 28/145 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT  ++L +                     +   +  L     +    +
Sbjct: 3   IAVTGNIGAGKTTLTTMLAKH------------YGWDAQFEDVDHNPYLGDFYADMSKWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
            A+   F  +R   V+ +       GK ++ DR  + D+    +   D S     D    
Sbjct: 51  FALQIYFLGSRFRQVKEI----RDSGKNIVQDRTIYEDAHIFAENLNDMSLMTDRDFNNY 106

Query: 123 ISVQEVM------PDCTIIL--DLP 139
            +V  +M      PD  I L  D+P
Sbjct: 107 SAVFGLMKSFVSAPDLLIYLKSDVP 131


>gi|228921849|ref|ZP_04085164.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837854|gb|EEM83180.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 219

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 27/196 (13%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L + L +   +   T       +++  +H ++        
Sbjct: 20  IVI-GISGHGAAGKTTFTNRLVKLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76

Query: 64  AEAEAIVFAAAR--LDHVENVIRPALMEGKILL---CDRFLDSSYAYQGERDSSQHLFLD 118
              +     A      H+      AL     ++    D +   ++ Y   +  S    + 
Sbjct: 77  HRYK---MTACHPAAHHLA-----ALERDIHMVRAGLDFYTIDTH-YMKSKLISSENKVT 127

Query: 119 SLQEISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ +S   + P   D  I      +  L R  +R      A ++Y  +     HE+RR 
Sbjct: 128 IVEGMSAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGADINYLRQS----HEERRI 183

Query: 176 IFLDIARNQPDRCHIV 191
            +     +   R  I+
Sbjct: 184 QYEVFMHSYSQRFDII 199


>gi|254384225|ref|ZP_04999569.1| dephospho-CoA kinase [Streptomyces sp. Mg1]
 gi|194343114|gb|EDX24080.1| dephospho-CoA kinase [Streptomyces sp. Mg1]
          Length = 204

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 34/210 (16%)

Query: 11  GIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           GI GAGK+    LL  +        R   +V     PG      A    +L+        
Sbjct: 9   GI-GAGKSEVSRLLAGYGAVVVDADRIAREVVEPGTPGLAAVVAAFGESVLTPEGRLDRP 67

Query: 65  EAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  ++VFA  A+L  + +++ P             + +  A       +  + +  +  +
Sbjct: 68  KLGSLVFADPAKLQTLNSIVHPL------------VGARSAELEAAAGADAIVVHDVPLL 115

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   + P  D  +++D      L R+     + E               +  R+  L +A
Sbjct: 116 AENGLAPLYDLVVVVDAAPGTQLARLTALRGMAEEEARARMAA------QATREQRLAVA 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                   ++D+    +++   +  +  EL
Sbjct: 170 T------LVIDNDGPLEALEPQVRKVWEEL 193


>gi|184200294|ref|YP_001854501.1| polyphosphate kinase 2 [Kocuria rhizophila DC2201]
 gi|183580524|dbj|BAG28995.1| polyphosphate kinase 2 [Kocuria rhizophila DC2201]
          Length = 363

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 34/125 (27%), Gaps = 31/125 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I FEG + AGK   I      L  +   V    +P      +                
Sbjct: 131 LLIIFEGRDAAGKGGAIKRFTEHLNPRGARVVALEKPTDIEQTQW--------------- 175

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                 +    + H+ +        G+I+L DR   S Y   G      +       E  
Sbjct: 176 ------YFQRYVQHLPSG-------GEIVLMDR---SWYNRAGVERVMGYCTSQQYYEFM 219

Query: 125 VQEVM 129
            Q   
Sbjct: 220 RQAPE 224


>gi|4102823|gb|AAD09325.1| ATP sulfurylase/APS kinase [Homo sapiens]
          Length = 624

 Score = 39.2 bits (91), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|329113424|ref|ZP_08242205.1| Bifunctional enzyme NodQ [Acetobacter pomorum DM001]
 gi|326697249|gb|EGE48909.1| Bifunctional enzyme NodQ [Acetobacter pomorum DM001]
          Length = 626

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 32/120 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T     +  L     DV                  +L       G   +   
Sbjct: 454 GLSGSGKSTLARAAETRLFADGVDVT-----------------VLDGDTLRAGLCKDLGF 496

Query: 71  FAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQHLFLDS 119
             A R ++V     V R     G++++         DR      A Q   D  + +F+D+
Sbjct: 497 SEADRTENVRRAAEVARLLRDAGQVVIVALISPLRSDR----DLARQIIGDGFEEVFVDA 552


>gi|295693853|ref|YP_003602463.1| deoxyguanosine kinase [Lactobacillus crispatus ST1]
 gi|295031959|emb|CBL51438.1| Deoxyguanosine kinase [Lactobacillus crispatus ST1]
          Length = 228

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 31/168 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDS-- 119
           +  A +     L+   + I+ AL E   +L DR +   +  +Q   D  +     +D+  
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106

Query: 120 --LQEISVQEVM-----PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             L  +  +        PD  + +++  D  +KR+Q R    E    D
Sbjct: 107 ELLHNMMSELKRMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD 154


>gi|170582971|ref|XP_001896373.1| adenylate kinase isoenzyme 1 [Brugia malayi]
 gi|158596432|gb|EDP34773.1| adenylate kinase isoenzyme 1, putative [Brugia malayi]
          Length = 347

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 43/215 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                       +  R+      V+  GA A+++ 
Sbjct: 162 GAPGAGKGTQCAKMVEK-----------YGLTHLSTGDLLRN-----EVESCGARADSLK 205

Query: 71  FAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISVQ 126
                 + V   ++   L E           S     G R      +   +   ++   +
Sbjct: 206 KMMQNGELVPARIVLDLLKE---------AMSRATINGSRGFLIDGYPREIIQGEQFEHE 256

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
              PD  I       +  +R  NR  +        F+     I ++  + + +IA     
Sbjct: 257 VQSPDLVIYFKADKKVLYERCMNRQKISG-----RFDDSSETIQKRL-KTY-EIASTPVV 309

Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
              NQ  +   + S  + Q V   +   + +++ K
Sbjct: 310 DYYNQKGKLLQITSEGTVQDVFAIVETHLDKVISK 344


>gi|189424591|ref|YP_001951768.1| sulfate adenylyltransferase, large subunit [Geobacter lovleyi SZ]
 gi|189420850|gb|ACD95248.1| sulfate adenylyltransferase, large subunit [Geobacter lovleyi SZ]
          Length = 647

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L++ L +                      +LL       G   +   
Sbjct: 484 GLSGSGKSTIANALEQRLVQLGRHT-----------------MLLDGDNIRHGLNKDLGF 526

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
             A R++++     V +     G +++ 
Sbjct: 527 TEADRIENIRRIGEVAKLMTEAGLVVIT 554


>gi|29827190|ref|NP_821824.1| phosphotransferase (aminonucleoside antibiotic resistance)
          [Streptomyces avermitilis MA-4680]
 gi|29604288|dbj|BAC68359.1| putative phosphotransferase [Streptomyces avermitilis MA-4680]
          Length = 206

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 14/91 (15%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FGA 64
           I+  GI  AGK+T   +L   L +    VHV          +  R ++++   +     
Sbjct: 17 LIT--GIPAAGKSTVAQMLAERLPQ---SVHV--------RGDQFRRMVINGRAEMTADP 63

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLC 95
            EA+     R      VI      G  ++ 
Sbjct: 64 SDEALRQLRLRHSLTAKVIDQYFEAGFTVVA 94


>gi|83592322|ref|YP_426074.1| hypothetical protein Rru_A0986 [Rhodospirillum rubrum ATCC 11170]
 gi|83575236|gb|ABC21787.1| hypothetical protein Rru_A0986 [Rhodospirillum rubrum ATCC 11170]
          Length = 197

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 48/151 (31%), Gaps = 16/151 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G   +GKT  I  L     R    V V  E  G   A      L     D      
Sbjct: 8   IVFTGAPCSGKTEIIGRLAA---RHGGRVVVVPEVAGLAFAMN----LADGRADGRKIFF 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           EAI     RL+ V       L    ++L DR      AY           +D+L  +   
Sbjct: 61  EAIAALQVRLEEVAEACANRLDRP-VMLLDRGFFDVVAYAEAYG---ATEVDALGALGPG 116

Query: 127 EVMP--DCTIILDLP---VDIGLKRVQNRYS 152
            V+P  D    L      VD   +R  NR  
Sbjct: 117 GVVPRYDLVFNLGTAFGVVDEATRRANNRGE 147


>gi|15903245|ref|NP_358795.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae R6]
 gi|15458836|gb|AAL00006.1| ABC transporter ATP-binding protein - unknown substrate
          [Streptococcus pneumoniae R6]
          Length = 252

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + G FIS  GI G+GK+T +  +   L+  + +V +
Sbjct: 41 SRGEFISILGISGSGKSTLLKCISSLLEPTSGEVIL 76


>gi|21228122|ref|NP_634044.1| ATPase [Methanosarcina mazei Go1]
 gi|20906565|gb|AAM31716.1| twitching mobility (PilT) related protein [Methanosarcina mazei
           Go1]
          Length = 639

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T  + + R+L      V     P              S     
Sbjct: 269 QRGILIA--GPPGAGKSTFAAGVARYLNDHGQVVKTMESPRDLQVPAEITQY--SPLNGR 324

Query: 62  FGAEAEAIVF 71
               A+ ++ 
Sbjct: 325 MEDTADLLLL 334


>gi|114567820|ref|YP_754974.1| adenylate kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317303|sp|Q0AUK1|KAD_SYNWW RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|114338755|gb|ABI69603.1| Adenylate kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 215

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 23/151 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK T   LLK             R P       +  R  +      E G E
Sbjct: 3   IILMGPPGAGKGTQAELLKA------------RFPIPHISTGDIFRDAV--NQGSELGQE 48

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-LFLDSLQEIS 124
           A+  + +      V + I  A+++ +I   D   DS +   G   ++     LD    ++
Sbjct: 49  AQKYMSS---GQLVPDEITTAIVKERITQAD--CDSGFLLDGFPRTTDQAQALDQ--SLA 101

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 D  I +D+P  + ++R+  R S RE
Sbjct: 102 ELGKKVDLAINIDVPTQLLIERLSGRISCRE 132


>gi|262275341|ref|ZP_06053151.1| maltose/maltodextrin transport ATP-binding protein MalK [Grimontia
           hollisae CIP 101886]
 gi|262220586|gb|EEY71901.1| maltose/maltodextrin transport ATP-binding protein MalK [Grimontia
           hollisae CIP 101886]
          Length = 377

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 42/216 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHV 53
           +N G F+ F G  G GK+T + L+          L+     V     P         +  
Sbjct: 26  INKGDFVVFVGPSGCGKSTLLRLIAGLEDITSGDLKIDG-KVCNDLPPPERGIGMVFQSY 84

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            L   +  +   A  +  A A    V+  +R      ++       D+  A + +  S  
Sbjct: 85  ALYPHMTVYDNMAFGLKLAKAEAKTVDEKVREVAAALQL-------DTLLARKPKALSGG 137

Query: 114 HLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
                ++    V+E       + D     L   +   RVQ R  +         ER    
Sbjct: 138 QRQRVAIGRAIVREPK---VFLFDEPLSNLDASL---RVQMRMEIARLH-----ERLGAT 186

Query: 169 I----HEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
           +    H++     + +A        ++D+    + V
Sbjct: 187 MIYVTHDQVEA--MTLATK----IVVLDAGR-VEQV 215


>gi|253575930|ref|ZP_04853264.1| deoxynucleoside kinase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844724|gb|EES72738.1| deoxynucleoside kinase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 217

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 67/223 (30%), Gaps = 41/223 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G GK+T  + L   L  +        +    P  E           + +   
Sbjct: 12  LITVAGTVGVGKSTLTTALAARLGFR----TSMEKVDNNPYLEKFYQ-----DFERWSFH 62

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFLD 118
            +   F A R        +  +  G   + DR +          +A QG    + +    
Sbjct: 63  LQIY-FLAERF----KEQKAIVEAGGGFVQDRSIYEDTGIFAKMHADQGTMSKTDYETYT 117

Query: 119 SLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           SL E   ++     PD  I L+  +   L R++ R    E        + DV   E   +
Sbjct: 118 SLFEAMVMTPYFPHPDVLIYLEGNLSSILNRIRLRGREMEI-------QTDVSYWEHMHE 170

Query: 176 IFLDIARNQPDRCHIV-------DSA--HSFQSVATNILNIVW 209
            +        D C ++       D+    S   +      I+ 
Sbjct: 171 RYAKWIEEF-DACPVLRLNIDEYDATDEASLDEIIRQAAEIIH 212


>gi|225847932|ref|YP_002728095.1| cytidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643147|gb|ACN98197.1| cytidylate kinase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 214

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
          + I+ +G  G+GK+T   LL + L     D            A    ++ L    +E
Sbjct: 1  MIIAIDGPAGSGKSTIAKLLAKKLGFTYIDTGAM----YRALALKVINLSLDPNNEE 53


>gi|225389887|ref|ZP_03759611.1| hypothetical protein CLOSTASPAR_03636 [Clostridium asparagiforme
           DSM 15981]
 gi|225044080|gb|EEG54326.1| hypothetical protein CLOSTASPAR_03636 [Clostridium asparagiforme
           DSM 15981]
          Length = 460

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 45/198 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKT+      R+       V  T +     A    + +  S G +          F A
Sbjct: 302 GAGKTSVAD---RYAADYGLTVVDTDQRIEEMAGMPIKDIFASRGEEA---------FRA 349

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
              + +  + +        ++            G     +    + L+++          
Sbjct: 350 LETEMLRELFKENEPR---VIS----------VGGGLPLRAENRELLKQLGT-------V 389

Query: 134 IILDLPVDIGLKRV----QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
           ++LD+ VD  L+R+     +R  LR        E + +     RR ++ +       R  
Sbjct: 390 VLLDVSVDTVLERLGGDVSSRPMLRGDDVRGRVE-ELMAF---RRPVYRETC----HRTV 441

Query: 190 IVDSAHSFQSVATNILNI 207
            V+   + + +A  I  I
Sbjct: 442 DVNG-RTVEEIAAEIHKI 458


>gi|169825889|ref|YP_001696047.1| hypothetical protein Bsph_0288 [Lysinibacillus sphaericus C3-41]
 gi|168990377|gb|ACA37917.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 269

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 39/158 (24%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL + FEG++ AGK   I  L   +  + Y VH    P                      
Sbjct: 43  GLILVFEGMDAAGKGGAIKRLIERVDPRGYVVHPISAPQPHEL----------------- 85

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
                      R ++++   R     G+I + DR        +  E  +++  +  + +E
Sbjct: 86  -----------RYNYLQRFWRKLPQHGQIAVFDRSWYGRVLVERIEGFATKEEWSRAYEE 134

Query: 123 ISVQEVMPDCT--------IILDLPVDIGLKRVQNRYS 152
           I+  E +   T          L +  +  LKR + R  
Sbjct: 135 INNFEKI--LTEGDYIIIKFWLHVSDEEQLKRFKEREQ 170


>gi|168210537|ref|ZP_02636162.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213977|ref|ZP_02639602.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens CPE str. F4969]
 gi|170711399|gb|EDT23581.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens B str. ATCC 3626]
 gi|170714516|gb|EDT26698.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens CPE str. F4969]
          Length = 227

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74
           K+T +++L          +    EP          + +L     +    +  +   F   
Sbjct: 36  KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 82

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127
           R  H++      L+E    + DR +     +         + ++        L+ +    
Sbjct: 83  RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 137

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186
             P   + L++ VD  +KR+Q R    E       ER+     EK    + +   N    
Sbjct: 138 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 190

Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223
               ++     F++V  +    V  L+ +++S L + K
Sbjct: 191 PILRINVDELDFENVPED-REYVLNLIDEKLSELENNK 227


>gi|167750843|ref|ZP_02422970.1| hypothetical protein EUBSIR_01826 [Eubacterium siraeum DSM 15702]
 gi|167656278|gb|EDS00408.1| hypothetical protein EUBSIR_01826 [Eubacterium siraeum DSM 15702]
          Length = 583

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDV------HVTREPGGTPAAEAARHV 53
            SG  I+  G  G GKTT I+LL RF    +    V       VTR+          +  
Sbjct: 369 KSGQQIAIVGPTGCGKTTIINLLMRFYDTDKGGISVDGNNIKDVTRDSLRLSYGMVLQET 428

Query: 54  LLSCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            +  G              E  + AAA+  H  + I+        ++ D
Sbjct: 429 WIFEGTVRENIAYGKQDATEEEIVAAAKAAHCHSFIKRMKDGYDTIISD 477


>gi|55959198|emb|CAI15068.1| guanylate kinase 1 [Homo sapiens]
          Length = 242

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 45/221 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 1   MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 47

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G D +    E +     R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 48  ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            LD     ++ I   ++ P   I + + P  + + R++ R +  E + +         + 
Sbjct: 99  VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLRLRQRNTETEESLVKRLAAAQADME 155

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                     +  +P    +V    S       +   + E+
Sbjct: 156 ----------SSKEPGLFDVVIINDSLDQAYAELKEALSEV 186


>gi|118575617|ref|YP_875360.1| signal recognition particle GTPase [Cenarchaeum symbiosum A]
 gi|118194138|gb|ABK77056.1| signal recognition particle GTPase [Cenarchaeum symbiosum A]
          Length = 397

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGVDEFGAEAEAI 69
           GI+G+GK+T  + L + L R+ Y   V       P A    R +     V+ +G E E+ 
Sbjct: 64  GIQGSGKSTITAKLAKLLTRQGYKTGVVGADTYRPGALVQLRTMCERSNVEVYGEEGES- 122

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                    V   +R       ++L D            R   +   LD ++ I  +   
Sbjct: 123 ----DAPAVVRRGLRHFGDSCDVILVD---------TAGRHKEEGELLDEMKRIG-KAAE 168

Query: 130 PDCTII 135
           PD  ++
Sbjct: 169 PDLALL 174


>gi|328472443|gb|EGF43309.1| signal recognition particle-docking protein FtsY [Vibrio
           parahaemolyticus 10329]
          Length = 403

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 206 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 261

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 262 TGADSASVIYDAIEAAKARGVDVVIAD 288


>gi|298243947|ref|ZP_06967754.1| adenylate kinase [Ktedonobacter racemifer DSM 44963]
 gi|297557001|gb|EFH90865.1| adenylate kinase [Ktedonobacter racemifer DSM 44963]
          Length = 219

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 63/231 (27%), Gaps = 46/231 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G +G+GK T    L + L  ++           +   E                + 
Sbjct: 3   IILIGAQGSGKGTQAEKLSQSLDIRHVASGDLFRSAISQQTELGLKAKKYMDDGHLVPDD 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             I     RL        P    G  ++ D F  +    Q       ++           
Sbjct: 63  LTIAMVLDRLQA------PDCANG--VILDGFPRTIAQSQALDKGLANV----------- 103

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----------KDVMIHEKRRQ 175
               D  + L++P    LKR+  RY  +    +   E                ++++   
Sbjct: 104 GKRVDYALYLEVPRAELLKRLSGRYICKAHQHVYNIETNPPQIAGICDIDGSELYQRSDD 163

Query: 176 IFLDIARN----QPDRCHIVD------------SAHSFQSVATNILNIVWE 210
               I +       D  H++D               S   V   ++N++ E
Sbjct: 164 RGEAIQKRLDIFFNDTIHLIDYYDGQQKLIRVNGNQSIDRVQQELVNVISE 214


>gi|295096061|emb|CBK85151.1| amino acid ABC transporter ATP-binding protein, PAAT family (TC
          3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
          9394]
          Length = 271

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P G  +    R +
Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLSGGEILIDHKPTGQLSGSRLRQL 98


>gi|289522950|ref|ZP_06439804.1| guanylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503493|gb|EFD24657.1| guanylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 201

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 28/167 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G      G  GAGK T    L + L    Y +   TR+P      +   +  +     E
Sbjct: 13  KGYLFVISGPSGAGKGTIRRELFKRLSDLVYSISCTTRQPREGEQ-DGVDYYFVEGEEFE 71

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              ++   +  A    +     +  +   L EGK ++                    L +
Sbjct: 72  KRKKSGDFLEWAFVHGNYYGTPKKEVLKNLEEGKDVI--------------------LEI 111

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           D    ++V++V P+  +I  LP   ++  +R+ +R +  E +     
Sbjct: 112 DVQGALNVKKVFPEAVLIFILPPSEEVLRERLISRGTENEESLRTRL 158


>gi|229178876|ref|ZP_04306236.1| uridine kinase [Bacillus cereus 172560W]
 gi|228604641|gb|EEK62102.1| uridine kinase [Bacillus cereus 172560W]
          Length = 189

 Score = 39.2 bits (91), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188
           D TI +D P+DI + R   R    +   +D     D+  +    R+ +L+     +P+  
Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160

Query: 189 HIVDSAHSFQSVATNILNIVWEL 211
            I+D + S   +   I + V EL
Sbjct: 161 IILDGSLSVSEI---INHAVEEL 180


>gi|332044499|gb|EGI80693.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
           [Lacinutrix algicola 5H-3-7-4]
          Length = 375

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 20/190 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  + +       N  + + R        +  +         E    
Sbjct: 180 YIAIEGNIGAGKTSLATKMA---NDYNAKLILERFADNPFLPKFYKDAQRYAFTLEMS-- 234

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124
                F A R   + + +    +    ++ D  +  S  +           L   L  + 
Sbjct: 235 -----FLADRYQQINDDLSQLDLFKDFIVSDYDIFKSLIFSKITLHQDEFKLYRKLFYLM 289

Query: 125 VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +++  P+  + L        + ++ R    E          D    EK    +L+  +N
Sbjct: 290 YKDIAKPELYVYLYQNTKRLKENIKKRGRKYEQDI-------DNEYLEKINAGYLNFLKN 342

Query: 184 QPD-RCHIVD 192
           Q D    I+D
Sbjct: 343 QTDLNVKIID 352


>gi|265756823|ref|ZP_06090811.1| guanylate kinase [Bacteroides sp. 3_1_33FAA]
 gi|263233609|gb|EEZ19229.1| guanylate kinase [Bacteroides sp. 3_1_33FAA]
          Length = 189

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 5/101 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           M +G  I F    G+GK+T I+ L       ++ +  T  P          +  LS    
Sbjct: 1   MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF 60

Query: 60  DEFGAEAEAIVF---AAARLD-HVENVIRPALMEGKILLCD 96
            +  A  E + +      RL   ++  +   L  G+ ++ D
Sbjct: 61  KQRIANDEFLEYEEVYENRLYGTLKAQVEKQLEAGQNVIFD 101


>gi|228965487|ref|ZP_04126573.1| uridine kinase [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228794217|gb|EEM41735.1| uridine kinase [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 189

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188
           D TI +D P+DI + R   R    +   +D     D+  +    R+ +L+     +P+  
Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216
            I+D + S   +   I + V EL ++ V
Sbjct: 161 IILDGSLSVSEI---INHAVEELGRREV 185


>gi|261379617|ref|ZP_05984190.1| signal recognition particle-docking protein FtsY [Neisseria
           subflava NJ9703]
 gi|284798099|gb|EFC53446.1| signal recognition particle-docking protein FtsY [Neisseria
           subflava NJ9703]
          Length = 510

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 317 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 371

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 372 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 422

Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159
            MPD      ++LD   +IG   V    +  E+  L
Sbjct: 423 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 456


>gi|317509243|ref|ZP_07966864.1| adenylate kinase [Segniliparus rugosus ATCC BAA-974]
 gi|316252453|gb|EFV11902.1| adenylate kinase [Segniliparus rugosus ATCC BAA-974]
          Length = 182

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 25/200 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T  +LL + L   +     T +       E+     L     ++    + + 
Sbjct: 8   GLPGAGKGTQSALLAKSL---DVPHVSTGDLFRANIGESTP---LGQEAKKYLDAGQLVP 61

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            +       + + +P   +G   + D +          R   Q   L  +  ++      
Sbjct: 62  SSVTNAMVKDRLSQPDARKGY--ILDGY---------PRTVDQAEALSDI--LAELGEKI 108

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  +   LP ++ ++R+  R    ++       +  + IH+   +  LD  R   D    
Sbjct: 109 DVVLSFVLPEEVVVERMLARGRADDTEE---IIKGRLQIHKNETEPLLDFYR---DLVVS 162

Query: 191 VDSAHSFQSVATNILNIVWE 210
           +D+  S + V    L  + +
Sbjct: 163 IDAVGSVEEVQERALAALDK 182


>gi|228952883|ref|ZP_04114951.1| uridine kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228806793|gb|EEM53344.1| uridine kinase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 186

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188
           D TI +D P+DI + R   R    +   +D     D+  +    R+ +L+     +P+  
Sbjct: 101 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 157

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216
            I+D + S   +   I + V EL ++ V
Sbjct: 158 IILDGSLSVSEI---INHAVEELGRREV 182


>gi|241664042|ref|YP_002982402.1| deoxynucleoside kinase [Ralstonia pickettii 12D]
 gi|240866069|gb|ACS63730.1| deoxynucleoside kinase [Ralstonia pickettii 12D]
          Length = 214

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 22/177 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT     L   L+        T        A  AR             + 
Sbjct: 9   IVVEGPIGVGKTALAQRLADHLRAS------TLFETPAENAFIAR-FYEDPARYALPVQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSL-QEI 123
             ++  A RL         A + G+ ++ D FL  D  +A Q    + +    D++   +
Sbjct: 62  RFLLQRAERL----KAWHKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMANAL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ +   D  + L    +  L RV  R    E+         D    E+    + ++
Sbjct: 117 ALPQQRIDLVVCLQARAEDLLPRVTRRAVPYETGI-------DAEYLERICAAYGEL 166


>gi|138894297|ref|YP_001124750.1| spermidine/putrescine ABC transporter ATP-binding protein
          [Geobacillus thermodenitrificans NG80-2]
 gi|134265810|gb|ABO66005.1| Spermidine/putrescine ABC transporter ATP-binding protein
          [Geobacillus thermodenitrificans NG80-2]
          Length = 374

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          M  G F +  G  G GKTT + L+  F++  +  V+ 
Sbjct: 40 MERGKFYTLLGPSGCGKTTILRLIAGFIEPTDGTVYF 76


>gi|114556435|ref|XP_513390.2| PREDICTED: cytidylate kinase isoform 3 [Pan troglodytes]
          Length = 211

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 51/176 (28%), Gaps = 45/176 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  + +                     A E  R    +              
Sbjct: 42  GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79

Query: 71  FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119
                      +I   + EGKI+       L  R +D + A   +R+           D+
Sbjct: 80  -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQRNKFLIDGFPRNQDN 132

Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIH 170
           LQ  +   +   D    +  D   +I ++R   R      +  +    E++ + + 
Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRYLAVF 188


>gi|62738384|pdb|1X6V|B Chain B, The Crystal Structure Of Human 3'-Phosphoadenosine-5'-
           Phosphosulfate Synthetase 1
 gi|62738385|pdb|1X6V|A Chain A, The Crystal Structure Of Human 3'-Phosphoadenosine-5'-
           Phosphosulfate Synthetase 1
 gi|75765501|pdb|1XJQ|B Chain B, Adp Complex Of Human Paps Synthetase 1
 gi|75765502|pdb|1XJQ|A Chain A, Adp Complex Of Human Paps Synthetase 1
 gi|75765503|pdb|1XNJ|B Chain B, Aps Complex Of Human Paps Synthetase 1
 gi|75765504|pdb|1XNJ|A Chain A, Aps Complex Of Human Paps Synthetase 1
          Length = 630

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|89092565|ref|ZP_01165518.1| hypothetical protein MED92_14703 [Oceanospirillum sp. MED92]
 gi|89083077|gb|EAR62296.1| hypothetical protein MED92_14703 [Oceanospirillum sp. MED92]
          Length = 160

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 32/163 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+   FI F G  GAGKTT    L         +  +  E             L S    
Sbjct: 1   MDKSRFIFFCGKMGAGKTTLSRKLAAQ-----RNAVLLSED----------EWLASLYPG 45

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +  +  + I ++      ++++++  L  G  ++ D                Q  +  S+
Sbjct: 46  QISSLQDYIHYSGLLRPQIKSLVQSILRSGTDVVMD---------FPANTPKQRAWFRSI 96

Query: 121 --QEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160
             +  +  E+     I +DLP ++ L+++  R     E A  D
Sbjct: 97  FSETGAEHEL-----IYIDLPDEVCLQQIAKRSAEQPERAATD 134


>gi|320154974|ref|YP_004187353.1| signal recognition particle receptor protein FtsY subunit alpha
           [Vibrio vulnificus MO6-24/O]
 gi|319930286|gb|ADV85150.1| signal recognition particle receptor protein FtsY (alpha subunit)
           [Vibrio vulnificus MO6-24/O]
          Length = 395

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 198 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 253

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 254 TGADSASVIYDAIEAAKARGVDVVIAD 280


>gi|296533362|ref|ZP_06895962.1| plasmid partitioning protein RepA [Roseomonas cervicalis ATCC
           49957]
 gi|296266317|gb|EFH12342.1| plasmid partitioning protein RepA [Roseomonas cervicalis ATCC
           49957]
          Length = 399

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 13/86 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           G+GKTT  + L ++L  + + V  +  +P  + +A       L  G +E        ++A
Sbjct: 123 GSGKTTTAAHLAQYLAFQGHRVLALDLDPQASLSALFGYQPELDIGENET-------LYA 175

Query: 73  AARLDH----VENVIRPALMEG-KIL 93
           A R D     +  VIRP+ + G  I+
Sbjct: 176 ALRYDRQRKPLREVIRPSYIAGLDIV 201


>gi|229145137|ref|ZP_04273529.1| uridine kinase [Bacillus cereus BDRD-ST24]
 gi|229150750|ref|ZP_04278964.1| uridine kinase [Bacillus cereus m1550]
 gi|228632837|gb|EEK89452.1| uridine kinase [Bacillus cereus m1550]
 gi|228638335|gb|EEK94773.1| uridine kinase [Bacillus cereus BDRD-ST24]
          Length = 186

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 43/219 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59
           N    IS   + G GKTT    LK   +          T +       +         G 
Sbjct: 3   NKTKIISIAAVSGGGKTTITERLKHKFKNSKALYFDSYTFDNSPADICKWI-----DDGA 57

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +        ++        +E +I+   ++  I+      D  +AY              
Sbjct: 58  NYDEWVLTPLIHD------IEQLIQNNTLDYIIV------DYPFAY-------------- 91

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178
           L     + +  D TI +D P+DI + R   R    +   +D     D+  +    R+ +L
Sbjct: 92  LNSEMRKFI--DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYL 146

Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +     +P+   I+D + S   +   I + V EL ++ V
Sbjct: 147 EAIHTVKPNSDIILDGSLSVSEI---INHAVEELGRREV 182


>gi|196248102|ref|ZP_03146804.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus
          sp. G11MC16]
 gi|196212886|gb|EDY07643.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus
          sp. G11MC16]
          Length = 371

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          M  G F +  G  G GKTT + L+  F++  +  V+ 
Sbjct: 37 MERGKFYTLLGPSGCGKTTILRLIAGFIEPTDGTVYF 73


>gi|157364500|ref|YP_001471267.1| cytidylate kinase [Thermotoga lettingae TMO]
 gi|166987624|sp|A8F7R9|KCY_THELT RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|157315104|gb|ABV34203.1| cytidylate kinase [Thermotoga lettingae TMO]
          Length = 223

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 72/245 (29%), Gaps = 60/245 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR------------------FLQRKNYDVH------ 36
           MN    I+ +G  G+GK++   L+ +                  +L  K           
Sbjct: 1   MNR-FLIAIDGPAGSGKSSVAKLVAQKMNMNYLDTGAMYRAVALYLHSKGLSAKDDLKKH 59

Query: 37  ---VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
              +  E          + V       E G  A       A  + +  + R     GK +
Sbjct: 60  LAEIDIEYIDGELYLNKKKVSDEIRSSEAGKLASDFATIPAVRERLTQIQRHICQNGKFV 119

Query: 94  LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
           +             E      + L             D  I L        +RV+ R+  
Sbjct: 120 V-------------EGRDIGTVVL----------PEADVKIFLTASFK---ERVRRRFEE 153

Query: 154 RESACLDYFERKDVMIHEKRRQIF---LDIARNQP-DRCHIVD-SAHSFQSVATNILNIV 208
            ++  ++    +D+    K R        IA  +P +   ++D ++     VA  I  I 
Sbjct: 154 LKAKNMN-LTMEDIADQIKIRDRQDSSRSIAPLKPAEDAIVIDTTSKDINEVADEICQIA 212

Query: 209 WELVQ 213
           +  ++
Sbjct: 213 FRRIK 217


>gi|115376949|ref|ZP_01464169.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|310820586|ref|YP_003952944.1| deoxynucleoside kinase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366060|gb|EAU65075.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|309393658|gb|ADO71117.1| Deoxynucleoside kinase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 254

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 27/169 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F++  G  GAGKTT   L+ +      ++  +  EP          +  L     +   
Sbjct: 51  RFVALAGNIGAGKTTAAKLISQCF---GFE--LFDEP-------VIDNRFLKDYYADMRR 98

Query: 65  EAEAIV--FAAARLDHVENVIRPALMEGKILLCDR--FLDSSY--AYQGERDSSQHLFLD 118
            +  +   F   R++H   +I          + DR  + D      Y        +  LD
Sbjct: 99  WSFTLQLEFLIRRVEH-HELIHSVRKS---CVQDRTLYEDPEIFAKYLHGLGHLTNAELD 154

Query: 119 ----SLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYF 162
                 Q +S   + PD  I  ++  VD+ L+R++ R    E    D F
Sbjct: 155 LYYEYFQRLSRSILPPDKVICFEVGTVDVLLERIRTRGRAEEKGIQDQF 203


>gi|74002089|ref|XP_863102.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthethase 1 (PAPS synthethase 1)
           (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 5
           [Canis familiaris]
          Length = 637

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 60  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 154 FFEVFVDAPLHVCEQR 169


>gi|46094058|ref|NP_005434.4| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo
           sapiens]
 gi|23831324|sp|O43252|PAPS1_HUMAN RecName: Full=Bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1; Short=PAPS synthase 1; Short=PAPSS 1;
           AltName: Full=Sulfurylase kinase 1; Short=SK 1;
           Short=SK1; Includes: RecName: Full=Sulfate
           adenylyltransferase; AltName: Full=ATP-sulfurylase;
           AltName: Full=Sulfate adenylate transferase; Short=SAT;
           Includes: RecName: Full=Adenylyl-sulfate kinase;
           AltName: Full=3'-phosphoadenosine-5'-phosphosulfate
           synthase; AltName: Full=APS kinase; AltName:
           Full=Adenosine-5'-phosphosulfate 3'-phosphotransferase;
           AltName: Full=Adenylylsulfate 3'-phosphotransferase
 gi|3378101|gb|AAC28429.1| bifunctional ATP sulfurylase/adenosine 5'-phosphosulfate kinase
           [Homo sapiens]
 gi|7211186|gb|AAF40235.1| 3'-phosphoadenosine 5'-phosphosulfate synthetase [Homo sapiens]
 gi|30047099|gb|AAH50627.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo sapiens]
 gi|48146173|emb|CAG33309.1| PAPSS1 [Homo sapiens]
 gi|119626615|gb|EAX06210.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo sapiens]
 gi|158259009|dbj|BAF85463.1| unnamed protein product [Homo sapiens]
          Length = 624

 Score = 39.2 bits (91), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|326423803|ref|NP_760099.2| signal recognition particle-docking protein FtsY [Vibrio vulnificus
           CMCP6]
 gi|319999171|gb|AAO09626.2| signal recognition particle-docking protein FtsY [Vibrio vulnificus
           CMCP6]
          Length = 395

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 198 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 253

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 254 TGADSASVIYDAIEAAKARGVDVVIAD 280


>gi|317475400|ref|ZP_07934664.1| hypothetical protein HMPREF1016_01646 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316908428|gb|EFV30118.1| hypothetical protein HMPREF1016_01646 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 348

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 97  MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 150

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 151 ---HEMGLIDSSTYFRALACDHFRRIKKN------------------AYTIVKSNAVNAL 189

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 190 DDAERIIATEDVKPD-VVFFDMP 211


>gi|296435980|gb|ADH18154.1| cytidylate kinase [Chlamydia trachomatis G/9768]
 gi|297140341|gb|ADH97099.1| cytidylate kinase [Chlamydia trachomatis G/9301]
          Length = 216

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|228958786|ref|ZP_04120497.1| uridine kinase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229044250|ref|ZP_04191923.1| uridine kinase [Bacillus cereus AH676]
 gi|229109959|ref|ZP_04239539.1| uridine kinase [Bacillus cereus Rock1-15]
 gi|296503085|ref|YP_003664785.1| uridine kinase [Bacillus thuringiensis BMB171]
 gi|228673480|gb|EEL28744.1| uridine kinase [Bacillus cereus Rock1-15]
 gi|228725075|gb|EEL76359.1| uridine kinase [Bacillus cereus AH676]
 gi|228800883|gb|EEM47789.1| uridine kinase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|296324137|gb|ADH07065.1| uridine kinase [Bacillus thuringiensis BMB171]
          Length = 189

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 43/219 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59
           N    IS   + G GKTT    LK   +          T +       +         G 
Sbjct: 6   NKTKIISIAAVSGGGKTTITERLKHKFKNSKALYFDSYTFDNSPADICKWI-----DDGA 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +        ++        +E +I+   ++  I+      D  +AY              
Sbjct: 61  NYDEWVLTPLIHD------IEQLIQNNTLDYIIV------DYPFAY-------------- 94

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178
           L     + +  D TI +D P+DI + R   R    +   +D     D+  +    R+ +L
Sbjct: 95  LNSEMRKFI--DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYL 149

Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
           +     +P+   I+D + S   +   I + V EL ++ V
Sbjct: 150 EAIHTVKPNSDIILDGSLSVSEI---INHAVEELGRREV 185


>gi|212690783|ref|ZP_03298911.1| hypothetical protein BACDOR_00270 [Bacteroides dorei DSM 17855]
 gi|237708168|ref|ZP_04538649.1| guanylate kinase [Bacteroides sp. 9_1_42FAA]
 gi|237723701|ref|ZP_04554182.1| guanylate kinase [Bacteroides sp. D4]
 gi|212666660|gb|EEB27232.1| hypothetical protein BACDOR_00270 [Bacteroides dorei DSM 17855]
 gi|229437912|gb|EEO47989.1| guanylate kinase [Bacteroides dorei 5_1_36/D4]
 gi|229457721|gb|EEO63442.1| guanylate kinase [Bacteroides sp. 9_1_42FAA]
          Length = 189

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           M +G  I F    G+GK+T I+ L       ++ +  T  P          +  LS    
Sbjct: 1   MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF 60

Query: 60  DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96
            +  A  E +    V+       ++  +   L  G+ ++ D
Sbjct: 61  KQRIANDEFLEYEEVYENRFYGTLKAQVEKQLEAGQNVIFD 101


>gi|196042219|ref|ZP_03109500.1| hypothetical protein BC059799_2905 [Bacillus cereus NVH0597-99]
 gi|229091945|ref|ZP_04223133.1| hypothetical protein bcere0021_27400 [Bacillus cereus Rock3-42]
 gi|196026937|gb|EDX65563.1| hypothetical protein BC059799_2905 [Bacillus cereus NVH0597-99]
 gi|228691426|gb|EEL45186.1| hypothetical protein bcere0021_27400 [Bacillus cereus Rock3-42]
          Length = 282

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIIEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|170288554|ref|YP_001738792.1| ABC transporter related [Thermotoga sp. RQ2]
 gi|170176057|gb|ACB09109.1| ABC transporter related [Thermotoga sp. RQ2]
          Length = 258

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
            G  I   G  GAGK+T +  +   L+ +  ++ 
Sbjct: 25 QKGELIVILGPNGAGKSTLLKCIAGILKCQGVEIF 59


>gi|153835089|ref|ZP_01987756.1| cell division protein FtsY [Vibrio harveyi HY01]
 gi|148868439|gb|EDL67547.1| cell division protein FtsY [Vibrio harveyi HY01]
          Length = 410

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 213 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 268

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 269 TGADSASVIYDAIEAAKARGVDVVIAD 295


>gi|74002093|ref|XP_863147.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthethase 1 (PAPS synthethase 1)
           (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 7
           [Canis familiaris]
          Length = 627

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 60  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 154 FFEVFVDAPLHVCEQR 169


>gi|17227602|ref|NP_484150.1| guanylate kinase [Nostoc sp. PCC 7120]
 gi|20532108|sp|Q8Z0I7|KGUA_ANASP RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|17135084|dbj|BAB77630.1| guanylate kinase [Nostoc sp. PCC 7120]
          Length = 199

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 28/175 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
           SG  I   G  G GK T +  L +      Y V   TR P        + + +     +E
Sbjct: 19  SGKLIILTGPSGVGKGTLMRSLLQRHPELYYSVSATTRPPRPGEVNGESYYFVSRSKFEE 78

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             A+ E  + +A    +        +   +  GK+++                    + L
Sbjct: 79  LIAQGE-FLESAEFAGNYYGTPREAVLNQVQSGKLVVL------------------EIEL 119

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              ++I         +I + LP   +    R++ R    E A     +R    I 
Sbjct: 120 AGARQIRTSFPE-ALSIFI-LPPSFEELENRIRGRGQDSEEAIARRLQRAKEEIQ 172


>gi|325299639|ref|YP_004259556.1| hypothetical protein Bacsa_2546 [Bacteroides salanitronis DSM
           18170]
 gi|324319192|gb|ADY37083.1| hypothetical protein Bacsa_2546 [Bacteroides salanitronis DSM
           18170]
          Length = 253

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 1   MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 54

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 55  ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 93

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 94  DDAERMIATEDVKPD-VVFFDMP 115


>gi|297674114|ref|XP_002815085.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1-like [Pongo abelii]
          Length = 624

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|291557827|emb|CBL34944.1| ABC-type multidrug transport system, ATPase and permease components
           [Eubacterium siraeum V10Sc8a]
          Length = 583

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 14/109 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDV------HVTREPGGTPAAEAARHV 53
            SG  I+  G  G GKTT I+LL RF    +    V       VTR+          +  
Sbjct: 369 KSGQQIAIVGPTGCGKTTIINLLMRFYDTDKGGISVDGNNIKDVTRDSLRLSYGMVLQET 428

Query: 54  LLSCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            +  G              E  + AAA+  H  + I+        ++ D
Sbjct: 429 WIFEGTVRENIAYGKQDATEEEIVAAAKAAHCHSFIKRMKDGYDTIISD 477


>gi|156101594|ref|XP_001616490.1| XPA binding protein 1 [Plasmodium vivax SaI-1]
 gi|148805364|gb|EDL46763.1| XPA binding protein 1, putative [Plasmodium vivax]
          Length = 479

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 13/102 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54
           I   G+ G+GKTT++  L  +L+ +             V   + P      ++ +   ++
Sbjct: 189 IVI-GMAGSGKTTYVGSLYNYLKVEKKKKVYTMNLDPAVKYVQYPVNIDIRDSIKYHEIM 247

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   GA    +   A R D V  ++     +   ++ D
Sbjct: 248 KEYKLGPNGAIMTCLNLFATRFDKVIEILEKRKNKLHYIIVD 289


>gi|118591327|ref|ZP_01548725.1| GTP-binding signal recognition particle (SRP54)
           G-domain:ATP/GTP-binding site motif A (P-loop):AAA
           [Stappia aggregata IAM 12614]
 gi|118435999|gb|EAV42642.1| GTP-binding signal recognition particle (SRP54)
           G-domain:ATP/GTP-binding site motif A (P-loop):AAA
           [Stappia aggregata IAM 12614]
          Length = 474

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 16/139 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + L+ +   V +    G T  A A     L    +  GAE  A  
Sbjct: 278 GVNGTGKTTTIGKLSQKLRSEGKTVMLAA--GDTFRAAAVEQ--LKIWGERTGAEVIARD 333

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE----ISVQ 126
             A       + ++ A  +G  +L    +D+       R  ++   +D L++    I   
Sbjct: 334 TGADAAGLAYDAMKEAKAKGVDVLL---VDT-----AGRLQNKAELMDELEKVIRVIKKH 385

Query: 127 EVMPDCTIILDLPVDIGLK 145
           +     T++L L    G  
Sbjct: 386 DPEAPHTVLLTLDATTGQN 404


>gi|58221327|gb|AAW68306.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|193735106|gb|ACF20062.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 140

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 108 -AGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|2673862|emb|CAA71413.1| PAPS sunthetase [Homo sapiens]
          Length = 624

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|15901195|ref|NP_345799.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          TIGR4]
 gi|116516042|ref|YP_816643.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          D39]
 gi|148985709|ref|ZP_01818863.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP3-BS71]
 gi|148989456|ref|ZP_01820815.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP6-BS73]
 gi|148993104|ref|ZP_01822698.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP9-BS68]
 gi|148997608|ref|ZP_01825213.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP11-BS70]
 gi|149002705|ref|ZP_01827637.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP14-BS69]
 gi|149007003|ref|ZP_01830672.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP18-BS74]
 gi|149011575|ref|ZP_01832771.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP19-BS75]
 gi|168484610|ref|ZP_02709562.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          CDC1873-00]
 gi|168490375|ref|ZP_02714574.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP195]
 gi|168493248|ref|ZP_02717391.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          CDC3059-06]
 gi|168575800|ref|ZP_02721715.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          MLV-016]
 gi|169833157|ref|YP_001694783.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          Hungary19A-6]
 gi|221232013|ref|YP_002511165.1| putative ABC transport system ATP-binding protein [Streptococcus
          pneumoniae ATCC 700669]
 gi|225859109|ref|YP_002740619.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          70585]
 gi|237822293|ref|ZP_04598138.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae
          CCRI 1974M2]
 gi|307067994|ref|YP_003876960.1| antimicrobial peptide ABC transporter ATPase [Streptococcus
          pneumoniae AP200]
 gi|14972824|gb|AAK75439.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          TIGR4]
 gi|116076618|gb|ABJ54338.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          D39]
 gi|147756663|gb|EDK63704.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP11-BS70]
 gi|147759316|gb|EDK66309.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP14-BS69]
 gi|147761307|gb|EDK68273.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP18-BS74]
 gi|147764006|gb|EDK70938.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP19-BS75]
 gi|147922190|gb|EDK73312.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP3-BS71]
 gi|147924999|gb|EDK76080.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP6-BS73]
 gi|147928305|gb|EDK79322.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP9-BS68]
 gi|168995659|gb|ACA36271.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          Hungary19A-6]
 gi|172042179|gb|EDT50225.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          CDC1873-00]
 gi|183571304|gb|EDT91832.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          SP195]
 gi|183576785|gb|EDT97313.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          CDC3059-06]
 gi|183578296|gb|EDT98824.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          MLV-016]
 gi|220674473|emb|CAR69033.1| putative ABC transport system ATP-binding protein [Streptococcus
          pneumoniae ATCC 700669]
 gi|225721565|gb|ACO17419.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
          70585]
 gi|301794388|emb|CBW36820.1| putative ABC transport system ATP-binding protein [Streptococcus
          pneumoniae INV104]
 gi|301800217|emb|CBW32832.1| putative ABC transport system ATP-binding protein [Streptococcus
          pneumoniae OXC141]
 gi|306409531|gb|ADM84958.1| ABC-type antimicrobial peptide transport system, ATPase component
          [Streptococcus pneumoniae AP200]
 gi|332074672|gb|EGI85146.1| ABC transporter family protein [Streptococcus pneumoniae GA17545]
 gi|332074922|gb|EGI85394.1| ABC transporter family protein [Streptococcus pneumoniae GA41301]
          Length = 246

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + G FIS  GI G+GK+T +  +   L+  + +V +
Sbjct: 35 SRGEFISILGISGSGKSTLLKCISSLLEPTSGEVIL 70


>gi|4895138|gb|AAD32745.1| MmcU [Streptomyces lavendulae]
          Length = 160

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 7/44 (15%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          G  GAGKTT    L   L+ +   V V          +A R +L
Sbjct: 19 GPPGAGKTTIARALAERLRERGRRVEVL-------DGDATRALL 55


>gi|326385089|ref|ZP_08206759.1| daunorubicin resistance ABC transporter ATPase subunit [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196174|gb|EGD53378.1| daunorubicin resistance ABC transporter ATPase subunit [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 521

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 37/204 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58
            G   +  G  GAGKTT +++L   L+       V        AA   R ++L+      
Sbjct: 226 KGKIFALLGPNGAGKTTVVNMLCTLLRPDGGSASVNGHDVVEDAAGVRRSIMLTGQFAAL 285

Query: 59  VDEFGAEAEAIVF----------AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
            +        ++F          A  R + +           K +             G+
Sbjct: 286 DESLTGRENLVLFGRLLGLAKSAAKMRAEELLETFSLVAAADKKV-------------GQ 332

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
                   +D    I+   V     + LD     GL     R      + ++      V 
Sbjct: 333 YSGGMRRRID----IACGLVTEPKVVFLD-EPTTGLD---PRSRQDVWSLVEKLREDGVT 384

Query: 169 IHEKRRQIFLDIARNQPDRCHIVD 192
           +    +  +L+ A    D   ++D
Sbjct: 385 VLLTTQ--YLEEADMLSDHIVVID 406


>gi|323188585|gb|EFZ73870.1| hypothetical protein ECRN5871_3004 [Escherichia coli RN587/1]
          Length = 232

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNKLASRMPTEHIYLGQSSGRIGEWILQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++     +G +L+ DR+         
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225

Query: 207 IVWELV 212
            +   +
Sbjct: 226 AIHAAL 231


>gi|296436907|gb|ADH19077.1| cytidylate kinase [Chlamydia trachomatis G/11222]
          Length = 216

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|288932506|ref|YP_003436566.1| hypothetical protein Ferp_2160 [Ferroglobus placidus DSM 10642]
 gi|288894754|gb|ADC66291.1| protein of unknown function ATP binding protein [Ferroglobus
           placidus DSM 10642]
          Length = 233

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 71/234 (30%), Gaps = 52/234 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR-EPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  G+GK+T       +L+   YDV V   +P   P  EA R++      +E   + +  
Sbjct: 7   GPAGSGKSTFAKEFSTYLREGGYDVKVVNLDPATDPIYEADRNLRDFIKTEEVMKKFKLG 66

Query: 70  VFAAA--RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           +  A    ++    ++   ++EG+ ++ D             D      ++ L   +   
Sbjct: 67  INGALIKSMEMSLEILDEVIVEGEYVIYD--TPGQMELFLYTD-FGEKLVEKLNGFTTGL 123

Query: 128 VM----------------------------PDCTIIL--DLPVDIGLKRVQNRYSLRESA 157
            +                            P  TI    DL   + LK V+ R S  E  
Sbjct: 124 FLIDSCLATSHEKFAACVAQAVVVTLRFSIPFVTIFTKSDLCEALSLKDVKKRISESEGM 183

Query: 158 CLDYFERKDVMIHEKRRQIFLDIAR--NQPDRCHIVDS--AHSFQSVATNILNI 207
             +  E             FL        P R   + S     F  V   I  I
Sbjct: 184 VAEVLEN------------FLRFVDVTTLPQRIVRISSKDRRGFDEVFGVIHEI 225


>gi|225711370|gb|ACO11531.1| Deoxynucleoside kinase [Caligus rogercresseyi]
          Length = 247

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 22/160 (13%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFGAEA 66
            EG  G+GK+T I + +        D+ V +EP  +        +  L+      +    
Sbjct: 34  VEGPTGSGKSTFIEMFRSR-----PDIFVVQEPLSSWMDVNGTDLFGLMYRDPQRWSGAF 88

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----------SYAYQGERDSSQHL 115
           +    + +RL  V     P      I + +R + S           +        +    
Sbjct: 89  QLHA-SLSRLRSVTEK-TPWGKR--IRILERSIYSQRYTFLEHLIKTEVMAKAETALMDK 144

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           + D + +   +++ PD  I L    D+  +R+  R    E
Sbjct: 145 WFDFMVKRFERQMKPDLIIYLRGSNDVFKERILKRGRTEE 184


>gi|240120142|ref|NP_001155275.1| radial spoke protein AK58 [Ciona intestinalis]
 gi|237769619|dbj|BAH59278.1| radial spoke protein AK58 [Ciona intestinalis]
          Length = 485

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 68/243 (27%), Gaps = 61/243 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTRE--PGGTPAAEAARHVLLSCGVDE 61
           I   G  G+GK+     L    + K  DV    + +E     T   EA R  +       
Sbjct: 271 IVLIGATGSGKSCIAQRLAT--KYKIVDVSCGTLLKEQVANNTKMGEALREFVSGGERVP 328

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                +     A RL  ++   R  ++ G                        L  D  +
Sbjct: 329 NSLVTKV---VADRLMQLDASSRGWVLHGY----------------------PLTRDQAE 363

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYFERKDV 167
            +    + P+     D+P D  ++R+  R +               R +       +   
Sbjct: 364 GLFDAGLQPNRIYFFDIPDDCVIERLCYRITDPISGERYHTLYNPPRSNDVKQRCLQNYK 423

Query: 168 MIHEKRRQ---IFLDIARNQPDRC-----HIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
                 RQ    +   A    D         +++    Q+V   + + +       V+PL
Sbjct: 424 DSQNNVRQLLNEYHSYAEELTDYYSEEGALRINADQDPQTVFEYVESTL-------VNPL 476

Query: 220 SSK 222
              
Sbjct: 477 PGH 479


>gi|190573662|ref|YP_001971507.1| hypothetical protein Smlt1677 [Stenotrophomonas maltophilia K279a]
 gi|190011584|emb|CAQ45203.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 187

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 32/171 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T    L                P     +E A    L  G  E  + A+ +  AA
Sbjct: 36  GAGKSTLSQQLAA-------------NPRHVLISEDAWLATLHPG--EIHSVADYLQRAA 80

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
                + + +R  L  G  ++ D F  ++ A +G         + +  ++          
Sbjct: 81  TLRSVLTDHLRTLLRAGVSVVLD-FPFNTPATRGWAREV-FSPVGAAHQLH--------- 129

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             LD+  ++   R++ R +  E      F+  D    +  R  F+  A  +
Sbjct: 130 -FLDIADEVCKARLRARNACGEHP----FQASDEEFEQITRH-FVAPAAEE 174


>gi|2853267|gb|AAC39894.1| PAPS synthase [Homo sapiens]
          Length = 623

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|76789188|ref|YP_328274.1| cytidylate kinase [Chlamydia trachomatis A/HAR-13]
 gi|123606859|sp|Q3KLP6|KCY_CHLTA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|76167718|gb|AAX50726.1| cytidylate kinase [Chlamydia trachomatis A/HAR-13]
          Length = 216

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|74002083|ref|XP_851070.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthethase 1 (PAPS synthethase 1)
           (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 2
           [Canis familiaris]
          Length = 625

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 60  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 154 FFEVFVDAPLHVCEQR 169


>gi|15618168|ref|NP_224453.1| adenylate kinase [Chlamydophila pneumoniae CWL029]
 gi|15835779|ref|NP_300303.1| adenylate kinase [Chlamydophila pneumoniae J138]
 gi|16752794|ref|NP_445062.1| adenylate kinase [Chlamydophila pneumoniae AR39]
 gi|33241586|ref|NP_876527.1| adenylate kinase [Chlamydophila pneumoniae TW-183]
 gi|6647540|sp|Q9Z8U0|KAD_CHLPN RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|4376519|gb|AAD18397.1| Adenylate Kinase [Chlamydophila pneumoniae CWL029]
 gi|4760698|dbj|BAA77386.1| adenylate kinase [Chlamydophila pneumoniae]
 gi|7189434|gb|AAF38344.1| adenylate kinase [Chlamydophila pneumoniae AR39]
 gi|8978617|dbj|BAA98454.1| adenylate kinase [Chlamydophila pneumoniae J138]
 gi|33236094|gb|AAP98184.1| adenylate kinase [Chlamydophila pneumoniae TW-183]
          Length = 213

 Score = 39.2 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 28/154 (18%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G +FI   G  G+GK T    L   +         T         +  R ++     
Sbjct: 1   MTKGSVFIIM-GPPGSGKGTQSQYLANRI---GLPHIST--------GDLLRAIIREGTP 48

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLF 116
           +   A+A     A    D V  +++  L      K  + D F  +      +        
Sbjct: 49  NGLKAKAYLDKGAFVPSDFVWEILKEKLQSQACSKGCIIDGFPRTL----DQAHLLDSFL 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +D     +         I L++  D  LKRV +R
Sbjct: 105 MDVHSNYT--------VIFLEISEDEILKRVCSR 130


>gi|313667376|ref|YP_004047660.1| regulatory protein PilA [Neisseria lactamica ST-640]
 gi|313004838|emb|CBN86263.1| regulatory protein PilA [Neisseria lactamica 020-06]
          Length = 502

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 309 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 363

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 364 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 414

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 415 AMPDAPHEIIVVLD 428


>gi|315054905|ref|XP_003176827.1| multidrug resistance protein 1 [Arthroderma gypseum CBS 118893]
 gi|311338673|gb|EFQ97875.1| multidrug resistance protein 1 [Arthroderma gypseum CBS 118893]
          Length = 1269

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRF 27
            G FI+F G  G GK+T I+LL RF
Sbjct: 1048 GKFIAFVGPSGCGKSTMINLLCRF 1071


>gi|255322547|ref|ZP_05363692.1| adenylate kinase [Campylobacter showae RM3277]
 gi|255300455|gb|EET79727.1| adenylate kinase [Campylobacter showae RM3277]
          Length = 188

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56
           M     I   G  G+GKTT  SL+ +   +  +    D+       G+   +     +  
Sbjct: 1   MKKLFLII--GAPGSGKTTDASLIAQEDAKFAHFSTGDLLRAEVASGSELGKLIDGFISK 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +        AIV A          I+ +      ++ D +  S      E+ +     
Sbjct: 59  GNLVPLDVVVNAIVSA----------IKSSEKSN--VIIDGYPRS-----VEQMTELDKV 101

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKR 173
           L +  EI+++       I +D+   +  +RV  R    +       +   +  +   E  
Sbjct: 102 LAAQNEIALKG-----VIEVDVSEAVARERVLGRARGADDNNEVFNNRM-KVYLEPIEAI 155

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           R+ +      +    H+V+   + + +  ++  +V  L
Sbjct: 156 RKFY-----KEKGLLHVVNGERAIEPIVADVKALVNSL 188


>gi|227497288|ref|ZP_03927520.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Actinomyces urogenitalis DSM 15434]
 gi|226833159|gb|EEH65542.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Actinomyces urogenitalis DSM 15434]
          Length = 180

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++ EG  GAGK+T +++L 
Sbjct: 29 IRQGDFVAIEGPSGAGKSTLLNVLA 53


>gi|225619758|ref|YP_002721015.1| cytidylate kinase [Brachyspira hyodysenteriae WA1]
 gi|225214577|gb|ACN83311.1| cytidylate kinase [Brachyspira hyodysenteriae WA1]
          Length = 223

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          I+ +G  GAGK+T   LL + L  K  D
Sbjct: 8  ITLDGPSGAGKSTIAKLLAKKLSFKYLD 35


>gi|209545242|ref|YP_002277471.1| Sulfate adenylyltransferase., Adenylyl-sulfate kinase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532919|gb|ACI52856.1| Sulfate adenylyltransferase., Adenylyl-sulfate kinase
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 626

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 24/116 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T     +  L  +  D+                  +L       G  A+   
Sbjct: 454 GLPGAGKSTIARAAESRLFAQGIDI-----------------SVLDGDTLRAGLCADLGF 496

Query: 71  FAAARLDHVEN---VIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDS 119
             A R ++V     V R     G+++    +  R  D   A Q   D  + +F+D+
Sbjct: 497 SEADRTENVRRAAAVARILAETGQVVLVALISPRTADRDLARQIVGDGFREIFIDA 552


>gi|152991239|ref|YP_001356961.1| guanylate kinase [Nitratiruptor sp. SB155-2]
 gi|151423100|dbj|BAF70604.1| guanylate kinase [Nitratiruptor sp. SB155-2]
          Length = 207

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 8/101 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G  GAGK+T I  +   +    + +  T  P      E           +E
Sbjct: 3   QKGALLVISGPSGAGKSTLIKTIVEHIPDVYFSISTTTRP--KRPGEVDGKDYYFVSKEE 60

Query: 62  FGAEAEAIVFA--AARLDHVE----NVIRPALMEGKILLCD 96
           F  E EA +F   A    +        ++ A+ EGK++L D
Sbjct: 61  FEKEIEAGMFLEWANVHGNYYGTSLRPVKQAVEEGKLVLFD 101


>gi|119719602|ref|YP_920097.1| hypothetical protein Tpen_0692 [Thermofilum pendens Hrk 5]
 gi|119524722|gb|ABL78094.1| conserved hypothetical protein [Thermofilum pendens Hrk 5]
          Length = 452

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T    + R L+       V R P   P  +     LL   V  F +  +   +  
Sbjct: 135 GAGKSTVSRRVARVLRELGVRFVVVRHP--MPYGD-----LLKSAVQRFASLEDLERYNC 187

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV---MP 130
              +       P +  G ++       +   Y+     ++      L +    +     P
Sbjct: 188 TIEE--REEYEPHIESGNVV------YAGVDYEAILRRAEEEADLVLWDGGNNDWPFYKP 239

Query: 131 DCTI 134
           D  I
Sbjct: 240 DLYI 243


>gi|77919469|ref|YP_357284.1| hypothetical protein Pcar_1873 [Pelobacter carbinolicus DSM 2380]
 gi|77545552|gb|ABA89114.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 521

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 42/205 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR-EPGGTPAAEAARHVLLSCGVDEFGAEA--E 67
           G+ G GK+T    L   L  +       R E  G P  E            +   +A  +
Sbjct: 346 GLMGVGKSTIARELATPLGAELLSSDALRKELAGIPQQERHHEAFGEGIYSQSSRQATYD 405

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           A++  A             L  G+ ++    +D+S+A                   + + 
Sbjct: 406 ALLTGA----------LATLETGRPVI----VDASFA--------DEKERKRFHAAANRA 443

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN---- 183
             P  T+++    +I L+R+ +R +  + A                R ++   ARN    
Sbjct: 444 GYPVWTVLVTCDREIALQRLDDRQAKGKDASDGR------------RALYDQQARNFDPV 491

Query: 184 -QPDRCHIVDSAHSFQSVATNILNI 207
            +  R   VD      SV   +LN 
Sbjct: 492 KEATRVLRVDGNADTASVIDELLNA 516


>gi|27573159|gb|AAO19979.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 311

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++A  
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQA-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|7211188|gb|AAF40236.1|AF105227_1 3'-phosphoadenosine 5'-phosphosulfate synthetase [Homo sapiens]
          Length = 624

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|319644344|ref|ZP_07998817.1| TraA protein [Bacteroides sp. 3_1_40A]
 gi|317384141|gb|EFV65115.1| TraA protein [Bacteroides sp. 3_1_40A]
          Length = 253

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 36/145 (24%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDV--HVTREPGGTPAAEAARHVL 54
           M++ +F++F   +G  G GK+T  +L   +L   K Y+V      +P  +      R   
Sbjct: 1   MSNEIFVAFATQKG--GIGKSTVTALAANYLHNVKGYNVAVIDCDDPQHSIHGLRERETK 58

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           L           E++ F A   DH   V +                   AY   + +SQ 
Sbjct: 59  LID---------ESLYFKALACDHFRKVRKN------------------AYPVIKSNSQD 91

Query: 115 LFLDSLQEISVQEVMPDCTIILDLP 139
              D+ + +  +EV PD     D+P
Sbjct: 92  ALDDADRMLVSEEVKPDIVF-FDMP 115


>gi|283784204|ref|YP_003364069.1| shikimate kinase II [Citrobacter rodentium ICC168]
 gi|282947658|emb|CBG87213.1| shikimate kinase II [Citrobacter rodentium ICC168]
          Length = 162

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 133 TIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
            I L  PV I + R+      +LR +        +   + ++R  ++ + A        I
Sbjct: 78  VIYLRAPVSILVNRLAASPEEALRPALTGKPLSEEVAEVLQQRDALYREAAH------FI 131

Query: 191 VDSAHSFQSVATNILNIVWELVQKR 215
           VD+  S   V + I + + + VQ++
Sbjct: 132 VDATGSPDQVISEIRHALAQTVQRK 156


>gi|260567292|ref|ZP_05837762.1| uridine kinase [Brucella suis bv. 4 str. 40]
 gi|260156810|gb|EEW91890.1| uridine kinase [Brucella suis bv. 4 str. 40]
          Length = 218

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 27  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGL 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 87  PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176


>gi|212223400|ref|YP_002306636.1| ABC-type iron(III)-siderophore transport system, ATPase component
          [Thermococcus onnurineus NA1]
 gi|212008357|gb|ACJ15739.1| ABC-type iron(III)-siderophore transport system, ATPase component
          [Thermococcus onnurineus NA1]
          Length = 258

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G FI   G  GAGK+T +  +   L  +  +V + R     P  E AR +
Sbjct: 29 GEFIVILGPNGAGKSTLLRCIAGILHCEGVEV-LERPIESYPRNELARVL 77


>gi|170077164|ref|YP_001733802.1| putative kinase [Synechococcus sp. PCC 7002]
 gi|169884833|gb|ACA98546.1| putative kinase [Synechococcus sp. PCC 7002]
          Length = 174

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 39/174 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGAEAEAI 69
           G  G+GK+T    L++ + +               + +A R  +    G+   G   EAI
Sbjct: 14  GAPGSGKSTFAQWLRQTMPQA-----------CLISTDAIRVQLYGDPGIQGDGPTIEAI 62

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--SQHLFLDSLQEISVQE 127
                    V   +  A+ +GK ++     D++  +Q  R     +   LD L       
Sbjct: 63  ---------VLWRLHQAIAQGKPVI----YDATNCHQPWRLDFLKKCPPLDWLAW----- 104

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                   L  P+ I L R Q R        ++   R       + ++ FL+I 
Sbjct: 105 -------YLACPLGICLARNQRRSRQVPPEIIEKMIRDLEAAPPQAQEGFLEII 151


>gi|153971636|ref|YP_001393154.1| putative conjugative transfer protein TraD [Vibrio vulnificus]
 gi|152955137|emb|CAL25488.1| putative conjugative transfer protein TraD [Vibrio vulnificus]
          Length = 699

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-GAE 65
            +G  G+GK+  +  L R+++++     V  +     +   + ++ +LL+   +     +
Sbjct: 203 IDGTTGSGKSVMLRKLLRWIRKRGDKAIVYDKGCTFTSKFFDPSQDILLNPFDERCANWD 262

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                  A   +++ N + P   EG    +   R + SS AY+  +D+        L  I
Sbjct: 263 VWCDAKEAPDFENIANALIPQHGEGDPFWVDSARTIFSSAAYRMSQDNKPCSTARLLSLI 322

Query: 124 SVQEVM 129
              E+ 
Sbjct: 323 LTSEIE 328


>gi|90419546|ref|ZP_01227456.1| adenylylsulfate kinase apsK [Aurantimonas manganoxydans SI85-9A1]
 gi|90336483|gb|EAS50224.1| adenylylsulfate kinase apsK [Aurantimonas manganoxydans SI85-9A1]
          Length = 208

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 50/151 (33%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T  +L+++ L  +    +                 LL       G   
Sbjct: 35  IWFTGLSGAGKSTIANLVEKSLFARGRHTY-----------------LLDGDNLRHGLNR 77

Query: 67  EAIVFAAARLDHVENVIRPA---LMEGKILL--------CDRFLDSSYAYQGERDSSQHL 115
           +     A R++++  V   A   +  G I+L         DR                  
Sbjct: 78  DLGFSEADRVENIRRVAEAARLFVDAGLIVLASFISPYRSDR-------RMARSLFEDGE 130

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           F++               + +D P++I  +R
Sbjct: 131 FIE---------------VFVDTPLEIAEQR 146


>gi|29375334|ref|NP_814488.1| deoxynucleoside kinase [Enterococcus faecalis V583]
 gi|227517704|ref|ZP_03947753.1| deoxyguanosine kinase [Enterococcus faecalis TX0104]
 gi|227554855|ref|ZP_03984902.1| deoxyguanosine kinase [Enterococcus faecalis HH22]
 gi|229546576|ref|ZP_04435301.1| deoxyguanosine kinase [Enterococcus faecalis TX1322]
 gi|229548685|ref|ZP_04437410.1| deoxyguanosine kinase [Enterococcus faecalis ATCC 29200]
 gi|255971198|ref|ZP_05421784.1| deoxynucleoside kinase [Enterococcus faecalis T1]
 gi|255973821|ref|ZP_05424407.1| deoxynucleoside kinase [Enterococcus faecalis T2]
 gi|256617625|ref|ZP_05474471.1| deoxynucleoside kinase [Enterococcus faecalis ATCC 4200]
 gi|256761508|ref|ZP_05502088.1| deoxynucleoside kinase [Enterococcus faecalis T3]
 gi|256854394|ref|ZP_05559758.1| deoxynucleoside kinase [Enterococcus faecalis T8]
 gi|256957392|ref|ZP_05561563.1| deoxynucleoside kinase [Enterococcus faecalis DS5]
 gi|256959872|ref|ZP_05564043.1| deoxynucleoside kinase [Enterococcus faecalis Merz96]
 gi|256964425|ref|ZP_05568596.1| deoxynucleoside kinase [Enterococcus faecalis HIP11704]
 gi|257077611|ref|ZP_05571972.1| deoxynucleoside kinase [Enterococcus faecalis JH1]
 gi|257081003|ref|ZP_05575364.1| deoxynucleoside kinase [Enterococcus faecalis E1Sol]
 gi|257083665|ref|ZP_05578026.1| deoxynucleoside kinase [Enterococcus faecalis Fly1]
 gi|257086098|ref|ZP_05580459.1| deoxynucleoside kinase [Enterococcus faecalis D6]
 gi|257089165|ref|ZP_05583526.1| deoxynucleoside kinase [Enterococcus faecalis CH188]
 gi|257415308|ref|ZP_05592302.1| deoxynucleoside kinase [Enterococcus faecalis AR01/DG]
 gi|257418348|ref|ZP_05595342.1| deoxynucleoside kinase [Enterococcus faecalis T11]
 gi|257420998|ref|ZP_05597988.1| deoxynucleoside kinase [Enterococcus faecalis X98]
 gi|293385063|ref|ZP_06630897.1| deoxynucleoside kinase [Enterococcus faecalis R712]
 gi|293389334|ref|ZP_06633795.1| deoxynucleoside kinase [Enterococcus faecalis S613]
 gi|294779944|ref|ZP_06745325.1| deoxynucleoside kinase [Enterococcus faecalis PC1.1]
 gi|300862029|ref|ZP_07108109.1| deoxyguanosine kinase [Enterococcus faecalis TUSoD Ef11]
 gi|307269793|ref|ZP_07551123.1| deoxynucleoside kinase [Enterococcus faecalis TX4248]
 gi|307272552|ref|ZP_07553805.1| deoxynucleoside kinase [Enterococcus faecalis TX0855]
 gi|307274673|ref|ZP_07555845.1| deoxynucleoside kinase [Enterococcus faecalis TX2134]
 gi|307284499|ref|ZP_07564661.1| deoxynucleoside kinase [Enterococcus faecalis TX0860]
 gi|307289568|ref|ZP_07569512.1| deoxynucleoside kinase [Enterococcus faecalis TX0109]
 gi|307296370|ref|ZP_07576195.1| deoxynucleoside kinase [Enterococcus faecalis TX0411]
 gi|312900334|ref|ZP_07759645.1| deoxynucleoside kinase [Enterococcus faecalis TX0470]
 gi|312904242|ref|ZP_07763404.1| deoxynucleoside kinase [Enterococcus faecalis TX0635]
 gi|312906052|ref|ZP_07765065.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 512]
 gi|312909398|ref|ZP_07768254.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 516]
 gi|312953124|ref|ZP_07771973.1| deoxynucleoside kinase [Enterococcus faecalis TX0102]
 gi|29342794|gb|AAO80558.1| deoxynucleoside kinase [Enterococcus faecalis V583]
 gi|227074859|gb|EEI12822.1| deoxyguanosine kinase [Enterococcus faecalis TX0104]
 gi|227176024|gb|EEI56996.1| deoxyguanosine kinase [Enterococcus faecalis HH22]
 gi|229306201|gb|EEN72197.1| deoxyguanosine kinase [Enterococcus faecalis ATCC 29200]
 gi|229308321|gb|EEN74308.1| deoxyguanosine kinase [Enterococcus faecalis TX1322]
 gi|255962216|gb|EET94692.1| deoxynucleoside kinase [Enterococcus faecalis T1]
 gi|255966693|gb|EET97315.1| deoxynucleoside kinase [Enterococcus faecalis T2]
 gi|256597152|gb|EEU16328.1| deoxynucleoside kinase [Enterococcus faecalis ATCC 4200]
 gi|256682759|gb|EEU22454.1| deoxynucleoside kinase [Enterococcus faecalis T3]
 gi|256709954|gb|EEU24998.1| deoxynucleoside kinase [Enterococcus faecalis T8]
 gi|256947888|gb|EEU64520.1| deoxynucleoside kinase [Enterococcus faecalis DS5]
 gi|256950368|gb|EEU67000.1| deoxynucleoside kinase [Enterococcus faecalis Merz96]
 gi|256954921|gb|EEU71553.1| deoxynucleoside kinase [Enterococcus faecalis HIP11704]
 gi|256985641|gb|EEU72943.1| deoxynucleoside kinase [Enterococcus faecalis JH1]
 gi|256989033|gb|EEU76335.1| deoxynucleoside kinase [Enterococcus faecalis E1Sol]
 gi|256991695|gb|EEU78997.1| deoxynucleoside kinase [Enterococcus faecalis Fly1]
 gi|256994128|gb|EEU81430.1| deoxynucleoside kinase [Enterococcus faecalis D6]
 gi|256997977|gb|EEU84497.1| deoxynucleoside kinase [Enterococcus faecalis CH188]
 gi|257157136|gb|EEU87096.1| deoxynucleoside kinase [Enterococcus faecalis ARO1/DG]
 gi|257160176|gb|EEU90136.1| deoxynucleoside kinase [Enterococcus faecalis T11]
 gi|257162822|gb|EEU92782.1| deoxynucleoside kinase [Enterococcus faecalis X98]
 gi|291077741|gb|EFE15105.1| deoxynucleoside kinase [Enterococcus faecalis R712]
 gi|291081356|gb|EFE18319.1| deoxynucleoside kinase [Enterococcus faecalis S613]
 gi|294452993|gb|EFG21414.1| deoxynucleoside kinase [Enterococcus faecalis PC1.1]
 gi|295114040|emb|CBL32677.1| Deoxynucleoside kinases [Enterococcus sp. 7L76]
 gi|300848554|gb|EFK76311.1| deoxyguanosine kinase [Enterococcus faecalis TUSoD Ef11]
 gi|306496054|gb|EFM65638.1| deoxynucleoside kinase [Enterococcus faecalis TX0411]
 gi|306499382|gb|EFM68755.1| deoxynucleoside kinase [Enterococcus faecalis TX0109]
 gi|306503176|gb|EFM72430.1| deoxynucleoside kinase [Enterococcus faecalis TX0860]
 gi|306508602|gb|EFM77700.1| deoxynucleoside kinase [Enterococcus faecalis TX2134]
 gi|306510837|gb|EFM79854.1| deoxynucleoside kinase [Enterococcus faecalis TX0855]
 gi|306513903|gb|EFM82505.1| deoxynucleoside kinase [Enterococcus faecalis TX4248]
 gi|310628047|gb|EFQ11330.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 512]
 gi|310628958|gb|EFQ12241.1| deoxynucleoside kinase [Enterococcus faecalis TX0102]
 gi|310632338|gb|EFQ15621.1| deoxynucleoside kinase [Enterococcus faecalis TX0635]
 gi|311290422|gb|EFQ68978.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 516]
 gi|311292522|gb|EFQ71078.1| deoxynucleoside kinase [Enterococcus faecalis TX0470]
 gi|315025763|gb|EFT37695.1| deoxynucleoside kinase [Enterococcus faecalis TX2137]
 gi|315029086|gb|EFT41018.1| deoxynucleoside kinase [Enterococcus faecalis TX4000]
 gi|315031434|gb|EFT43366.1| deoxynucleoside kinase [Enterococcus faecalis TX0017]
 gi|315036118|gb|EFT48050.1| deoxynucleoside kinase [Enterococcus faecalis TX0027]
 gi|315145242|gb|EFT89258.1| deoxynucleoside kinase [Enterococcus faecalis TX2141]
 gi|315146945|gb|EFT90961.1| deoxynucleoside kinase [Enterococcus faecalis TX4244]
 gi|315151560|gb|EFT95576.1| deoxynucleoside kinase [Enterococcus faecalis TX0012]
 gi|315153966|gb|EFT97982.1| deoxynucleoside kinase [Enterococcus faecalis TX0031]
 gi|315156759|gb|EFU00776.1| deoxynucleoside kinase [Enterococcus faecalis TX0043]
 gi|315157716|gb|EFU01733.1| deoxynucleoside kinase [Enterococcus faecalis TX0312]
 gi|315161940|gb|EFU05957.1| deoxynucleoside kinase [Enterococcus faecalis TX0645]
 gi|315164567|gb|EFU08584.1| deoxynucleoside kinase [Enterococcus faecalis TX1302]
 gi|315166910|gb|EFU10927.1| deoxynucleoside kinase [Enterococcus faecalis TX1341]
 gi|315170695|gb|EFU14712.1| deoxynucleoside kinase [Enterococcus faecalis TX1342]
 gi|315172176|gb|EFU16193.1| deoxynucleoside kinase [Enterococcus faecalis TX1346]
 gi|315575367|gb|EFU87558.1| deoxynucleoside kinase [Enterococcus faecalis TX0309B]
 gi|315577972|gb|EFU90163.1| deoxynucleoside kinase [Enterococcus faecalis TX0630]
 gi|315581397|gb|EFU93588.1| deoxynucleoside kinase [Enterococcus faecalis TX0309A]
 gi|323479935|gb|ADX79374.1| deoxyguanosine kinase [Enterococcus faecalis 62]
 gi|327534328|gb|AEA93162.1| deoxynucleoside kinase [Enterococcus faecalis OG1RF]
 gi|329573531|gb|EGG55136.1| deoxyguanosine kinase [Enterococcus faecalis TX1467]
          Length = 214

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 36/229 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++  +L+   L     Y+     E      AE                E
Sbjct: 4   IVLAGTIGAGKSSLTALIANRLGSEAFYESVDDNEVLPLFYAE---------------PE 48

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS---------QH 114
             A +     L+   + I+ AL     +L DR  + DS   +                  
Sbjct: 49  KYAFLLQIYFLNKRFDSIKQALTHENNVL-DRSIYEDSLLFHLNADLGRANETEVKVYDD 107

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L  + LQE+  +  +  PD  + + +     L+R++ R    E    D         ++ 
Sbjct: 108 LLQNMLQELPYAAHKKRPDLLVHIRISFPKMLERIKKRGRPYEQIETDP---TLYDYYQM 164

Query: 173 RRQIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
             + +     +  +   I +D    +  V        V  L++K++  L
Sbjct: 165 LNERYDQWYEDYDESPKIQIDGDK-YDFVEDPEACQYVLALIEKKIEEL 212


>gi|9757873|dbj|BAB08460.1| adenylylsulfate kinase-like protein [Arabidopsis thaliana]
          Length = 290

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 40/151 (26%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK++    L R L  +                      +L      
Sbjct: 102 QKGCVIWITGLSGSGKSSLACALSRALHNRGK-----------------LSYILDGDNVR 144

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G  ++    A  R +++     V +     G I +    L S Y               
Sbjct: 145 HGLNSDLSFEADDRAENIRRVGEVAKLFADSGIICIA--SLISPY--------------- 187

Query: 119 SLQEISVQEVMP--DCT-IILDLPVDIGLKR 146
            ++  + + ++P  D   + +D+P+ +   R
Sbjct: 188 RIERAACRALLPQGDFIEVFMDVPLHVCEAR 218


>gi|163938882|ref|YP_001643766.1| phosphoribulokinase/uridine kinase [Bacillus weihenstephanensis
           KBAB4]
 gi|163861079|gb|ABY42138.1| phosphoribulokinase/uridine kinase [Bacillus weihenstephanensis
           KBAB4]
          Length = 218

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 17/191 (8%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +       T     +       ++  +   +   
Sbjct: 19  IVI-GISGHGAAGKTTFANKLINQLNQNKVSYINTDPYIVSSNVRKYTNIHYTYQNENHY 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  A   +A  L  +E  ++  +  G     D +   ++ Y      S    +  ++ +
Sbjct: 78  DKMTACHPSAHHLSALERDVQ-MVRAG----LDFYTMDTH-YIKSELISSKNKVTIVEGM 131

Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           SV  + P   D  I      +  L R  +R  +   A ++Y  +     HE+RR  +   
Sbjct: 132 SVAFINPNLFDLKIYFYTDGETELMRRSSRDIIERGADINYLRKS----HEERRIQYEVF 187

Query: 181 ARNQPDRCHIV 191
                 R  I+
Sbjct: 188 MHQYSQRFDII 198


>gi|325848922|ref|ZP_08170432.1| polyamine ABC transporter, ATP-binding protein [Anaerococcus
          hydrogenalis ACS-025-V-Sch4]
 gi|325480566|gb|EGC83628.1| polyamine ABC transporter, ATP-binding protein [Anaerococcus
          hydrogenalis ACS-025-V-Sch4]
          Length = 368

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT ++L+  FL+  + ++++
Sbjct: 32 KGKFYTLLGPSGCGKTTILNLIAGFLEANSGEIYI 66


>gi|323492926|ref|ZP_08098066.1| signal recognition particle-docking protein FtsY [Vibrio
           brasiliensis LMG 20546]
 gi|323312819|gb|EGA65943.1| signal recognition particle-docking protein FtsY [Vibrio
           brasiliensis LMG 20546]
          Length = 404

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 207 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 262

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A  +G  +++ D
Sbjct: 263 TGADSASVIYDAIESAKAKGVDVVIAD 289


>gi|307252933|ref|ZP_07534821.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306859571|gb|EFM91596.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 241

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 55/234 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +             T         +  R  +      E G +A
Sbjct: 30  IILLGAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 76

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +A++        V + +  AL++ +I   D    + +   G   +      D+L++    
Sbjct: 77  KALM---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---S 126

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166
            V  D  +  D+  ++ ++R+  R                       +    D   R+D 
Sbjct: 127 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDD 186

Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                     + H++ +     +   A     R   +D     + V+  +  I+
Sbjct: 187 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 240


>gi|227552855|ref|ZP_03982904.1| conserved hypothetical protein [Enterococcus faecalis HH22]
 gi|256965527|ref|ZP_05569698.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257418906|ref|ZP_05595900.1| predicted protein [Enterococcus faecalis T11]
 gi|227177986|gb|EEI58958.1| conserved hypothetical protein [Enterococcus faecalis HH22]
 gi|256956023|gb|EEU72655.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257160734|gb|EEU90694.1| predicted protein [Enterococcus faecalis T11]
 gi|315573666|gb|EFU85857.1| conserved hypothetical protein [Enterococcus faecalis TX0309B]
 gi|315582719|gb|EFU94910.1| conserved hypothetical protein [Enterococcus faecalis TX0309A]
          Length = 177

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + L + L+ +              + +  R  +L    DE G 
Sbjct: 17  KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 66  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140


>gi|209882658|ref|XP_002142765.1| ABC-2 type transporter family protein [Cryptosporidium muris RN66]
 gi|209558371|gb|EEA08416.1| ABC-2 type transporter family protein [Cryptosporidium muris RN66]
          Length = 790

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 21/160 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
             G FI   GI G+GK+T ++ L   L+  N+ V    +         +   R VL    
Sbjct: 144 TPGQFIGIMGISGSGKSTLLNALSGRLKASNFIVTGSILVNGYSDIDLSYLTRLVLQKDF 203

Query: 59  VDEFGAEAEAIVFAAA-RLDH-----VENVIRPALMEGKIL-LCDRFLDSSYAYQGERDS 111
           +  +    E +  AA  RL H         I   L    IL L D  + S+         
Sbjct: 204 MLPYLTVRETMDIAAGLRLPHHSKKERNEKIEEIL---DILGLLD--IQSTLVGGISSKG 258

Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149
                +  L  I+++ +   P   + LD     GL   + 
Sbjct: 259 LSGGEIKRLS-IAIELLQGPP--VLFLD-EPTTGLDAARA 294


>gi|195477878|ref|XP_002100332.1| GE16225 [Drosophila yakuba]
 gi|194187856|gb|EDX01440.1| GE16225 [Drosophila yakuba]
          Length = 299

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          +   G+  +GK+T    L+     +   VH+  E    P A   ++
Sbjct: 4  VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN 49


>gi|194912820|ref|XP_001982574.1| GG12894 [Drosophila erecta]
 gi|190648250|gb|EDV45543.1| GG12894 [Drosophila erecta]
          Length = 299

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 19/46 (41%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          +   G+  +GK+T    L+     +   VH+  E    P A   ++
Sbjct: 4  VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN 49


>gi|152993786|ref|YP_001359507.1| guanylate kinase [Sulfurovum sp. NBC37-1]
 gi|151425647|dbj|BAF73150.1| guanylate kinase [Sulfurovum sp. NBC37-1]
          Length = 203

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 4/100 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G  +   G  GAGK+T I+     +    + +   TR+P            +     
Sbjct: 1   MHKGAILVLSGPSGAGKSTIINAASDEIGEYYFSISTTTRDPRMGEQDGVDYFFVSKEEF 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCD 96
           +E       + +A    ++    ++P   AL +GK+++ D
Sbjct: 61  EEDIKAGNFLEYAQVHGNYYGTSLKPVNKALEQGKLVIFD 100


>gi|118578512|ref|YP_899762.1| sulfate adenylyltransferase, large subunit [Pelobacter propionicus
           DSM 2379]
 gi|118501222|gb|ABK97704.1| adenylylsulfate kinase [Pelobacter propionicus DSM 2379]
          Length = 638

 Score = 39.2 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L+R L                        +LL       G   +   
Sbjct: 474 GLSGSGKSTIANCLERRLHAMGRHT-----------------ILLDGDNVRHGLNRDLGF 516

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
             A R++++     V +     G I++ 
Sbjct: 517 TEADRIENIRRIGEVAKLMTDAGLIVIS 544


>gi|297526472|ref|YP_003668496.1| adenylylsulfate kinase [Staphylothermus hellenicus DSM 12710]
 gi|297255388|gb|ADI31597.1| adenylylsulfate kinase [Staphylothermus hellenicus DSM 12710]
          Length = 181

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 16/96 (16%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59
          ++ G  + F G+ G+GKTT    +   L+ K Y V V          + AR  + L  G 
Sbjct: 4  LDKGFVVWFTGLPGSGKTTLAYKVAEILRDKGYRVEVI-------DGDWARKTISLGAGY 56

Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                          L  +  V R     G I+LC
Sbjct: 57 TREERRI--------HLHRIAWVARLLARNGVIVLC 84


>gi|260889029|ref|ZP_05900292.1| cytidylate kinase [Leptotrichia hofstadii F0254]
 gi|260861089|gb|EEX75589.1| cytidylate kinase [Leptotrichia hofstadii F0254]
          Length = 220

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 46/233 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-----HVTREPGGTPAAEAARHVLLSCGV 59
           + I+ +G  G+GK+T   L+   L+    D       VT +            ++     
Sbjct: 1   MIIAIDGPAGSGKSTIAKLIAEDLELVYLDTGAMYRLVTLKALNDGILGNLDKIIKMLDN 60

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYA-YQGERDSSQH 114
                +     F    +D  E + +P + E    + D    R +       Q +   S++
Sbjct: 61  LNIDIKENG--FYLDDIDVSEEIRKPVVSEN---VSDIAAIREVRKKMVDLQRKFSESKN 115

Query: 115 LFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           + LD  ++I    V P  D  I L   V    +R   RY    +   +           +
Sbjct: 116 VILDG-RDIGT-VVFPNADVKIFL---VADAKERANRRYKELVAKGEN----------VR 160

Query: 173 RRQIFLDIARNQ-------------PDRCHIVD-SAHSFQSVATNILNIVWEL 211
             +I+ +I +                D    VD ++ + + V   ILNI+ ++
Sbjct: 161 IEEIYENILKRDEIDSTRKESPLKKADNAIEVDTTSKNIEEVKNEILNIIRKI 213


>gi|224049079|ref|XP_002194377.1| PREDICTED: deoxycytidine kinase [Taeniopygia guttata]
          Length = 257

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 66/213 (30%), Gaps = 52/213 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--------------------GGTPA 46
           ++ EG   AGK+T +++LK+       +  V  EP                         
Sbjct: 17  VAVEGNIAAGKSTFVNILKQ----AGEEWEVVPEPVARWCNVQQSSGDDCEELSTSQRSG 72

Query: 47  AEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL------CDRFLD 100
               R +        F  +  A + +  R        +    +  ++        DR++ 
Sbjct: 73  GNVLRMMYEKPERWAFTFQTYACL-SRIRAQLGALERKRGDAQNPVVFFERSVYSDRYIF 131

Query: 101 SSYAYQGERDSSQHLFL-----DSLQ-----EISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           ++  Y+ +  +     +     D +       +++  +     I L    +  L R+  R
Sbjct: 132 AANLYESDCMNETEWTIYQDWHDWMNKQFGSRLALDGI-----IYLRATPEKCLNRIYLR 186

Query: 151 YSLRESA-CLDYFER-----KDVMIHEKRRQIF 177
               E    ++Y E+     +  + H   R  F
Sbjct: 187 GRDEEQEIPIEYLEKLHYKHESWLQHRTLRTNF 219


>gi|145300395|ref|YP_001143236.1| adenylylsulfate kinase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|229484852|sp|A4SRG6|CYSC_AERS4 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|142853167|gb|ABO91488.1| adenylylsulfate kinase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 196

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 62/216 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T    L++ L  +    +                 LL       G   
Sbjct: 27  IWFTGLSGAGKSTLAGALEQALAVEGKHTY-----------------LLDGDNVRHGLCG 69

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--Q 121
           +     AAR +++     V +  +  G I+L         A+     + + L  + L   
Sbjct: 70  DLGFDDAARQENIRRVGEVAKLMVDAGLIVLT--------AFISPFRAERELVRNLLGAD 121

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLDYFERKDVMIHEKRR 174
           E           + +D P+ +  +R             +R    +D              
Sbjct: 122 EFVE--------VFVDAPLAVCEERDPKGLYKKARAGEIRNFTGID-------------- 159

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             +   A  QP+  H++++     ++   +L  + +
Sbjct: 160 SAYE--APKQPE-IHLLNAGKPVAALVDELLTALRQ 192


>gi|70729070|ref|YP_258806.1| cytochrome c biogenesis protein CcmA [Pseudomonas fluorescens Pf-5]
 gi|122063273|sp|Q4KG27|CCMA_PSEF5 RecName: Full=Cytochrome c biogenesis ATP-binding export protein
           CcmA; AltName: Full=Heme exporter protein A
 gi|68343369|gb|AAY90975.1| heme exporter protein CcmA [Pseudomonas fluorescens Pf-5]
          Length = 211

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 4/85 (4%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEFGA 64
             G  G+GKT+ + LL   +Q  +  V +  +P     AE AR++L         +    
Sbjct: 36  ISGPNGSGKTSLLRLLAGLMQPTSGQVLLNGQPLHAQRAELARNLLWIGHAAGIKELLSP 95

Query: 65  EAEAIVFAAARLDHVENVIRPALME 89
           E       A         I  AL  
Sbjct: 96  EENLSWLCALHQPARREAIWQALAA 120


>gi|18309042|ref|NP_560976.1| deoxyguanosine kinase [Clostridium perfringens str. 13]
 gi|18143717|dbj|BAB79766.1| probable deoxyguanosine kinase [Clostridium perfringens str. 13]
          Length = 228

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74
           K+T +++L          +    EP          + +L     +    +  +   F   
Sbjct: 37  KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 83

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127
           R  H++      L+E    + DR +     +         + ++        L+ +    
Sbjct: 84  RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 138

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186
             P   + L++ VD  +KR+Q R    E       ER+     EK    + +   N    
Sbjct: 139 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 191

Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223
               ++     F++V  +    V  L+ +++S L + K
Sbjct: 192 PILRINVDELDFENVPED-REYVLNLIDEKLSELENNK 228


>gi|228901542|ref|ZP_04065724.1| hypothetical protein bthur0014_27320 [Bacillus thuringiensis IBL
          4222]
 gi|228858106|gb|EEN02584.1| hypothetical protein bthur0014_27320 [Bacillus thuringiensis IBL
          4222]
          Length = 282

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|169343408|ref|ZP_02864412.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens C str. JGS1495]
 gi|169298494|gb|EDS80580.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens C str. JGS1495]
          Length = 227

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74
           K+T +++L          +    EP          + +L     +    +  +   F   
Sbjct: 36  KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 82

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127
           R  H++      L+E    + DR +     +         + ++        L+ +    
Sbjct: 83  RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 137

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186
             P   + L++ VD  +KR+Q R    E       ER+     EK    + +   N    
Sbjct: 138 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 190

Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223
               ++     F++V  +    V  L+ +++S L + K
Sbjct: 191 PILRINVDELDFENVPED-REYVLNLIDEKLSQLENNK 227


>gi|50551793|ref|XP_503371.1| YALI0E00418p [Yarrowia lipolytica]
 gi|49649240|emb|CAG78950.1| YALI0E00418p [Yarrowia lipolytica]
          Length = 198

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 26/138 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++FL +                        L      FG   + 
Sbjct: 29  FTGLSASGKSTIATALEQFLLQN-----------------KINSYRLDGDNVRFGLNKDL 71

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
               A R +++  +   A +         F DS+        S       S +E+     
Sbjct: 72  GFSEADRNENIRRISEVAKL---------FTDSTCVTLTSFISPYKKDRQSARELHEASN 122

Query: 129 MPDCTIILDLPVDIGLKR 146
           +P   + +D+P+++  +R
Sbjct: 123 LPFVEVYVDVPIEVAEQR 140


>gi|70987262|ref|XP_749109.1| uridylate kinase Ura6 [Aspergillus fumigatus Af293]
 gi|66846739|gb|EAL87071.1| uridylate kinase Ura6 [Aspergillus fumigatus Af293]
 gi|159123118|gb|EDP48238.1| uridylate kinase Ura6 [Aspergillus fumigatus A1163]
          Length = 235

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 65/213 (30%), Gaps = 36/213 (16%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T  + L R      L   +       RE  G+   +  R  +    +     
Sbjct: 40  GGPGSGKGTQSANLVRDYGFIHLSAGDLLRAEQVRE--GSQYGDLIRTYIKEGKIVPMEI 97

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               +  A A              + K     RFL       G                 
Sbjct: 98  TVALLSNAMAEALAAGAGATAEGGKKKA----RFLID-----GFPRKLDQAV------FF 142

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
              V P + T+ LD P ++  KR+  R    E++  D    + +    KR ++F++    
Sbjct: 143 EDTVCPSEMTLFLDCPEEVMEKRLLKRG---ETSGRDDDNAESI---RKRFRVFVETSMP 196

Query: 180 --IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              A  +  +   V +  +   V   I   + +
Sbjct: 197 VVRAFEEQQKVLSVSATGTVDEVYARIREGLEK 229


>gi|99080117|ref|YP_612271.1| adenylate kinase [Ruegeria sp. TM1040]
 gi|99036397|gb|ABF63009.1| Adenylate kinase [Ruegeria sp. TM1040]
          Length = 193

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 38/216 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  S L +           TR        +  R         E G + 
Sbjct: 4   IILLGPPGAGKGTQASHLVK-----------TRNMTQLSTGDMLRAA--QSSGSEMGKKV 50

Query: 67  EAIVFA--AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            AI+          V  +IR  L EG         +  + + G   +      D+L+++ 
Sbjct: 51  AAIMAEGKLVTDQIVIGLIRERLQEGS--------EGGFIFDGFPRTLAQA--DALEKLL 100

Query: 125 VQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            +  +  D  I + +  ++ +KR+ NR     +A     E +     +  R   ++  + 
Sbjct: 101 TEMGLKLDAVIEMQVDDEVLVKRIVNRAEEARAAGK---EARADDNEDSVRIRLMEYYKK 157

Query: 184 ---------QPDRCHIVDSAHSFQSVATNILNIVWE 210
                           +D   S   V  +I  I+ +
Sbjct: 158 TSPLIGYYWAKGNLQRLDGMASIDEVQKSIAWILGD 193


>gi|325915272|ref|ZP_08177592.1| Adenylate kinase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538465|gb|EGD10141.1| Adenylate kinase [Xanthomonas vesicatoria ATCC 35937]
          Length = 187

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 55/219 (25%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T E       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                 AR D V + I          +P + +G   + D +          R+ +Q   L
Sbjct: 52  ----VMARGDLVSDDILLGMLESRLGQPDVAKGF--ILDGY---------PRNVAQANAL 96

Query: 118 DSLQEISVQEV-MP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           DSL    + ++  P D  + LD+  ++ ++R+  R    E    D  E        KR Q
Sbjct: 97  DSL----LGKIGQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQ 146

Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208
           ++ D          Q  +   VD   S   V   I   +
Sbjct: 147 VYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERISKAL 185


>gi|319638771|ref|ZP_07993530.1| cell division protein FtsY [Neisseria mucosa C102]
 gi|317400012|gb|EFV80674.1| cell division protein FtsY [Neisseria mucosa C102]
          Length = 510

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 317 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 371

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 372 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 422

Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159
            MPD      ++LD   +IG   V    +  E+  L
Sbjct: 423 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 456


>gi|291276604|ref|YP_003516376.1| putative ATP /GTP binding protein [Helicobacter mustelae 12198]
 gi|290963798|emb|CBG39634.1| putative ATP /GTP binding protein [Helicobacter mustelae 12198]
          Length = 335

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 14/89 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKR---FLQRKNYDV------HVTREPGGTPAAEAARHVLLS 56
           FI+  G  G GK+  +  LK     L+   +          T+E G  P+ +   +++  
Sbjct: 135 FITLSGPTGCGKSEILEALKEQCIHLESLAHHYGSSFGDIATKELGPQPSQKMFENLIAH 194

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRP 85
               +        +F  A    + N+I P
Sbjct: 195 EIHTKPQP-----LFIEAESKRLGNLIVP 218


>gi|259415828|ref|ZP_05739748.1| adenylate kinase (ATP-AMP transphosphorylase) [Silicibacter sp.
           TrichCH4B]
 gi|259347267|gb|EEW59044.1| adenylate kinase (ATP-AMP transphosphorylase) [Silicibacter sp.
           TrichCH4B]
          Length = 193

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 38/216 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  S L             +R        +  R         E G + 
Sbjct: 4   IILLGPPGAGKGTQASHLVE-----------SRNMTQLSTGDMLRAA--QSSGSEMGKKV 50

Query: 67  EAIVFA--AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123
            AI+          V  +IR  L EG         +  + + G   +      D+L++ +
Sbjct: 51  AAIMAEGKLVTDQIVIGLIRERLQEGS--------EGGFIFDGFPRTLAQA--DALEKLL 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +  ++  D  I + +  ++ +KR+ NR     +A     E +     E  R   ++  + 
Sbjct: 101 AEMDLKLDAVIEMQVDDEVLVKRIVNRAEEARAAGK---EARADDNEESVRIRLMEYYKK 157

Query: 184 ---------QPDRCHIVDSAHSFQSVATNILNIVWE 210
                           +D   S   V  +I  I+ E
Sbjct: 158 TSPLIGYYWAKGNLQRLDGMASIDEVQKSIAWILGE 193


>gi|222834682|gb|EEE73145.1| predicted protein [Populus trichocarpa]
          Length = 250

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGVDEFGAEAEAI 69
           GI+G+GK+T  + L + L R+ Y   V       P A    R +     V+ +G E E+ 
Sbjct: 106 GIQGSGKSTITAKLAKLLTRQGYKTGVVGADTYRPGALVQLRTMCERSNVEVYGEEGES- 164

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                    V   +R       ++L D            R   +   LD ++ I  +   
Sbjct: 165 ----DAPAVVRRGLRHFGDSCDVILVD---------TAGRHKEEGELLDEMKRIG-KAAE 210

Query: 130 PDCTII 135
           PD  ++
Sbjct: 211 PDLALL 216


>gi|149921143|ref|ZP_01909601.1| hypothetical protein PPSIR1_24934 [Plesiocystis pacifica SIR-1]
 gi|149818030|gb|EDM77489.1| hypothetical protein PPSIR1_24934 [Plesiocystis pacifica SIR-1]
          Length = 186

 Score = 39.2 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 28/164 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI   G  G GKTT    L   L+ ++Y +            E AR   LS   D   A 
Sbjct: 8   FI---GTHGVGKTTLCYGLAARLKAQDYVL--------DIVHEVARRCPLSINEDTNVAA 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----QGERDSSQHLFLDSLQ 121
              I+      + +      A     ++LCDR +  +Y Y     G  D+   L    L+
Sbjct: 57  QSWILHTQIADELL------AAARHPVVLCDRSVLDNYVYLLVAGGRDDALDTLVASWLR 110

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                    D  I + +  ++    +++  +  + A  D   R+
Sbjct: 111 TY-------DLLIYVPVVAELKPDGMRSTDAAFQQAIDDRLLRE 147


>gi|325287015|ref|YP_004262805.1| Adenylate kinase [Cellulophaga lytica DSM 7489]
 gi|324322469|gb|ADY29934.1| Adenylate kinase [Cellulophaga lytica DSM 7489]
          Length = 368

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 42/210 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GAGK T  + LK     K+    DV       GT     A+  +   G          ++
Sbjct: 189 GAGKGTQANFLKEQYNLKHISTGDVFRYNIKNGTELGTLAKSFI-DKGELVPDEVTINML 247

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                    E V +     G   + D F  ++         +Q   LD    +S +++  
Sbjct: 248 --------KEEVEKNPDASGF--IFDGFPRTT---------AQAEALD--NFLSTKDMKI 286

Query: 131 DCTIILDLPVDIGLKRVQNRY-------SLRESACLDYFERKDVMIHEKRR--QIFLDIA 181
           D TI LD   ++ ++R+  R           ES   + FE      ++K    Q +    
Sbjct: 287 DATIALDANDEVLIQRLLERGKVSGRSDDQDESKIRNRFE----EYNQKTAPLQAYY--- 339

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            N+  + H V+     + + T +  ++  L
Sbjct: 340 -NKQGKFHTVNGIGEIKEITTRLSKVIDTL 368


>gi|310658249|ref|YP_003935970.1| membrane ATPase/protein kinase [Clostridium sticklandii DSM 519]
 gi|308825027|emb|CBH21065.1| membrane ATPase/protein kinase [Clostridium sticklandii]
          Length = 310

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPG-----GTPAAEAARHVLLSCGVD 60
           I   G  GAGK+T    L + L+ K   V  +  +P      G    +  R V LS   D
Sbjct: 46  IGITGPPGAGKSTLTDKLIKKLREKGKKVGVIAIDPTSPFTKGAILGDRIRMVDLSVDKD 105


>gi|309794098|ref|ZP_07688523.1| conserved domain protein [Escherichia coli MS 145-7]
 gi|308122505|gb|EFO59767.1| conserved domain protein [Escherichia coli MS 145-7]
          Length = 131

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 31/141 (21%)

Query: 88  MEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQEV------MPDCTIIL 136
             G I+L DR+       AY G     +     F+  L     +         PD  I L
Sbjct: 6   RRGLIVLTDRYPQDQIPGAYDGTVFPPNIEGGRFVSWLASQERKAFHWMASHKPDLVIKL 65

Query: 137 DLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
           ++ +++   R     R SL     +       +            +          +D+ 
Sbjct: 66  NVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGAQLVD--------IDAN 107

Query: 195 HSFQSVATNILNIVWELVQKR 215
              + V  +    + + +  R
Sbjct: 108 RPLEQVLVDAEKAITDFMTAR 128


>gi|295688956|ref|YP_003592649.1| sulfate adenylyltransferase large subunit [Caulobacter segnis ATCC
           21756]
 gi|295430859|gb|ADG10031.1| sulfate adenylyltransferase, large subunit [Caulobacter segnis ATCC
           21756]
          Length = 635

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +L+++ L       +                 LL       G   +   
Sbjct: 467 GLSGAGKSTIANLVEKRLHALGRHTY-----------------LLDGDNVRHGLNKDLGF 509

Query: 71  FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R++    V  V +  +  G I+L         A+     + + L  D LQ     E
Sbjct: 510 TEEDRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRAERQLARDILQ---PGE 558

Query: 128 VMPDCTIILDLPVDIGLKR 146
                 + +D P+ +   R
Sbjct: 559 F---IEVFIDTPLAVAEAR 574


>gi|261401832|ref|ZP_05987957.1| signal recognition particle-docking protein FtsY [Neisseria
           lactamica ATCC 23970]
 gi|269208010|gb|EEZ74465.1| signal recognition particle-docking protein FtsY [Neisseria
           lactamica ATCC 23970]
          Length = 409

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 216 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 270

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 271 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 321

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 322 AMPDAPHEIIVVLD 335


>gi|225718626|gb|ACO15159.1| Guanylate kinase [Caligus clemensi]
          Length = 199

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 70/182 (38%), Gaps = 35/182 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M+S   +   G  G+GK+T I  L K F     + V H TR P       +A H +    
Sbjct: 1   MSSKTLVVC-GPSGSGKSTLIKRLFKEFPSAFGFSVSHTTRSPRPGEVPGSAYHFVERAE 59

Query: 59  VDEFGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +++  +  + I        ++  +    VE+V+       K+ + D  +D+    QG R 
Sbjct: 60  MEKMISNGDFIENAEFSGNLYGTS-FQAVESVV---ADSSKVCILD--IDA----QGVRQ 109

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFE--RKDV 167
                            + P   + + +P +++  +R++ R +  E +        ++++
Sbjct: 110 VKNKEE----------PLQP-LYVFIKVPSLEVLEERLRGRKTESEESLSKRLSMAKEEL 158

Query: 168 MI 169
             
Sbjct: 159 EY 160


>gi|218710918|ref|YP_002418539.1| cell division protein FtxY [Vibrio splendidus LGP32]
 gi|218323937|emb|CAV20299.1| Cell division protein ftsY [Vibrio splendidus LGP32]
          Length = 422

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 225 GVNGVGKTTTIGKLAKQFQSEGKKVMLAA--GDTFRAAAVEQLQVWGQRNDVPVIAQH-- 280

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 281 TGADSASVIYDAIEAAKARGVDVVIAD 307


>gi|323450023|gb|EGB05907.1| hypothetical protein AURANDRAFT_66102 [Aureococcus anophagefferens]
          Length = 227

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 23/148 (15%)

Query: 15  AGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV--F 71
            GK+T ++ L+        + V    EP            +    +     +  A+   +
Sbjct: 4   VGKSTLLAKLRDA--YAGVEGVVFVDEPVAAWEQAGLLSAMYDGRLHAAVFQMMALSTRY 61

Query: 72  AAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           AA R          AL  G ++++ +R L S                    +++   ++ 
Sbjct: 62  AALRR---------ALTSGARLVVSERSLWSDRCVFAATHLKGCD--KDAYDLAHDSMLA 110

Query: 131 DC------TIILDLPVDIGLKRVQNRYS 152
                   TI+LD PV   L RV  R  
Sbjct: 111 SLPATARATILLDAPVATLLARVAARGR 138


>gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans
           HB-1]
 gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans
           HB-1]
          Length = 448

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
           G++G+GKTT  + L  +L+++   V +T 
Sbjct: 106 GLQGSGKTTTAAKLANYLKKQGKKVLLTS 134


>gi|307321480|ref|ZP_07600876.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|306892865|gb|EFN23655.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
          Length = 169

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 63/206 (30%), Gaps = 51/206 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64
            EG  G GKT+    +   L+R+ Y V     V    G     +A     L+      G 
Sbjct: 8   IEGGSGTGKTS----VATELERRGYHVIHGDRVLAYVGDLETGQA-----LAGPPKGAGR 58

Query: 65  EAEAIVFAAARLDHVENVIRP--ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            A        R  H    +    A+             S +                L  
Sbjct: 59  VAW-------RYAHWIWPVDKVRAIAADTT-----HPASFFC------GGSRNSRKFLHL 100

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                   D   +LD+ V+   +R+  R +          ER  V+   + R+ +L    
Sbjct: 101 F-------DKVFVLDIDVETLNRRLDERPNDFGFKPA---ERALVLRCHRTRE-YL---- 145

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208
             P     +D+A++   V  +IL  +
Sbjct: 146 --PAGI-TIDTANTVARVVDDILAHL 168


>gi|259502493|ref|ZP_05745395.1| deoxynucleoside kinase [Lactobacillus antri DSM 16041]
 gi|259169519|gb|EEW54014.1| deoxynucleoside kinase [Lactobacillus antri DSM 16041]
          Length = 213

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 53/163 (32%), Gaps = 20/163 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           I+  G  GAGKT+   LL   L          +  +               +   L+  +
Sbjct: 2   IALAGTIGAGKTSLTQLLADHLNSTAFYESVDDNKILPLFYKNPKKYGFLLQIYFLNKRI 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           DE     +  +    R    E+ +   L            D   A Q E D    L  + 
Sbjct: 62  DEIKDSYDNDLNVLDRSI-FEDALLFKLNA----------DMGRATQTESDIYSSLLANM 110

Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           ++E+  Q     PD  I + +  +  LKR++ R    E    D
Sbjct: 111 MEELPEQPHQKAPDLLITIQVSFETMLKRIEKRGRAYEQIAND 153


>gi|242012113|ref|XP_002426785.1| dynein beta chain, ciliary, putative [Pediculus humanus corporis]
 gi|212510967|gb|EEB14047.1| dynein beta chain, ciliary, putative [Pediculus humanus corporis]
          Length = 4206

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTP 45
            M   + ++  G  G GKTT + LLK  LQ+  Y V   T  P   P
Sbjct: 1924 MQQRMGVALVGPSGTGKTTILKLLKSALQKLGYTVKRYTVNPKSMP 1969


>gi|194246475|ref|YP_002004114.1| Signal recognition particle-docking protein [Candidatus Phytoplasma
           mali]
 gi|193806832|emb|CAP18261.1| Signal recognition particle-docking protein [Candidatus Phytoplasma
           mali]
          Length = 324

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 13/91 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  + +  + K   V +    G T  + A   +        +G   ++ V
Sbjct: 127 GVNGVGKTTTIGKIAQQFKNKQKKVLLIA--GDTFRSGAIEQL------KIWGQRTQSTV 178

Query: 71  FAAARLDHVENVIRPAL-----MEGKILLCD 96
           F   +     NVI   L         ++LCD
Sbjct: 179 FFKEQAKSPSNVIFEGLQLAKKENYDVVLCD 209


>gi|189011600|ref|NP_001121044.1| hypothetical protein LOC688393 [Rattus norvegicus]
 gi|149050734|gb|EDM02907.1| rCG61644 [Rattus norvegicus]
 gi|171847403|gb|AAI61949.1| LOC688393 protein [Rattus norvegicus]
          Length = 373

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  K            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    + +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNTFRYVLID 122


>gi|58221335|gb|AAW68310.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|193735094|gb|ACF20056.1| regulatory protein [Neisseria gonorrhoeae]
 gi|193735098|gb|ACF20058.1| regulatory protein [Neisseria gonorrhoeae]
 gi|193735102|gb|ACF20060.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 140

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 108 -AGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|19526970|ref|NP_598517.1| GPN-loop GTPase 1 [Mus musculus]
 gi|34925345|sp|Q8VCE2|GPN1_MOUSE RecName: Full=GPN-loop GTPase 1; AltName: Full=MBD2-interacting
           protein; Short=MBDin; AltName: Full=XPA-binding protein
           1
 gi|18044064|gb|AAH20174.1| GPN-loop GTPase 1 [Mus musculus]
 gi|26346551|dbj|BAC36923.1| unnamed protein product [Mus musculus]
 gi|66792514|gb|AAH96466.1| GPN-loop GTPase 1 [Mus musculus]
 gi|74144765|dbj|BAE27360.1| unnamed protein product [Mus musculus]
 gi|74219305|dbj|BAE26784.1| unnamed protein product [Mus musculus]
 gi|148705422|gb|EDL37369.1| XPA binding protein 1 [Mus musculus]
          Length = 372

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L   L  K            VH    P      +    + V+   G+
Sbjct: 26  GMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  A    + +L D
Sbjct: 86  GPNGGIVTSLNLFATRFDQVMKFIEKAQNTFRYVLID 122


>gi|86148197|ref|ZP_01066495.1| cell division protein FtsY [Vibrio sp. MED222]
 gi|85834044|gb|EAQ52204.1| cell division protein FtsY [Vibrio sp. MED222]
          Length = 422

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 225 GVNGVGKTTTIGKLAKQFQSEGKKVMLAA--GDTFRAAAVEQLQVWGQRNDVPVIAQH-- 280

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 281 TGADSASVIYDAIEAAKARGVDVVIAD 307


>gi|302835766|ref|XP_002949444.1| hypothetical protein VOLCADRAFT_74239 [Volvox carteri f.
           nagariensis]
 gi|300265271|gb|EFJ49463.1| hypothetical protein VOLCADRAFT_74239 [Volvox carteri f.
           nagariensis]
          Length = 642

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GK+T+++ +  +L      V +      T  A A   +   C         
Sbjct: 414 IVFCGVNGVGKSTNLAKIAYWLGGHGIKVMIAA--CDTFRAGAVEQLKTHCARLRVPLYE 471

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISV 125
               +           IR A  +G+ ++    +D+       R       + +L   I+V
Sbjct: 472 RG--YEKDPAKVAYEAIRQAERDGQHVVL---VDT-----AGRMQDNQPLMRALSNLIAV 521

Query: 126 QEVMPDCTII 135
               P+  + 
Sbjct: 522 NN--PNLVLF 529


>gi|226304858|ref|YP_002764816.1| hypothetical protein RER_13690 [Rhodococcus erythropolis PR4]
 gi|226183973|dbj|BAH32077.1| hypothetical protein RER_13690 [Rhodococcus erythropolis PR4]
          Length = 203

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 19/151 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++ +G++G+GKTT    L   L  +   V    +    P     R              
Sbjct: 22  LVAIDGVDGSGKTTFAKSLTAQLNARTAIVIHVDDFLNPPEIRHRR--------GRQSP- 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRF----LDSSYAYQGERDSSQHLFLDSLQ 121
            E     +   D +E  +   L  G      R+        Y +  +        L  L 
Sbjct: 73  -EGFWLDSYDYDALERHVLDPLGPGG---SRRYRQRRDSDPYLHAADGAIVLVEGL-FLH 127

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
              + E   D ++ LD P +   +R+  R  
Sbjct: 128 RDELAERW-DYSVFLDAPFEETARRMNLRDG 157


>gi|156332002|ref|XP_001619228.1| hypothetical protein NEMVEDRAFT_v1g152021 [Nematostella vectensis]
 gi|156202011|gb|EDO27128.1| predicted protein [Nematostella vectensis]
          Length = 204

 Score = 39.2 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 59/199 (29%), Gaps = 38/199 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I+  G  GAGKTT   LL +    +    DV         P  +   H      ++ +  
Sbjct: 3   IAVAGNIGAGKTTLTKLLAKHFKWEAHYEDVV------DNPYLDDFYH-----QMERWSF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114
             +     +         +      GK  + DR  + DS        +     ERD   +
Sbjct: 52  NLQIYFLNSRFRQ-----VLQIRQSGKTTIQDRTIYEDSHIFAPNLYTMRLMSERDFKNY 106

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + L  L E  V    PD  I L          + N  +       DY     +    +  
Sbjct: 107 ISLFELMEGLVGS--PDLLIYL-------RSSIPNLVNQIHKRGRDYENTISIDYLSRLN 157

Query: 175 QIFLDIARN-QPDRCHIVD 192
           + +          +  I+D
Sbjct: 158 ERYEAWIETYDKGKLVIID 176


>gi|330813910|ref|YP_004358149.1| guanylate kinase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487005|gb|AEA81410.1| guanylate kinase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 209

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 27/161 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G+ I      GAGKTT    L          V   TR+P      +   H + S    
Sbjct: 15  KRGVLIVISSPSGAGKTTIAKKLVSKKLNIELSVSLTTRKPRSNEINKVDYHFV-SKKFF 73

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +   + +  +  A   D+     +  I   L +GK +L D        +QG R   +   
Sbjct: 74  QTKIKQKHFLEHAKVFDNFYGTSQKEITNKLSKGKNILLD------IDWQGARQVRKKKA 127

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            D++             I + LP    LK ++ R   RES+
Sbjct: 128 TDTVS------------IFI-LPP--SLKVLKQRLMKRESS 153


>gi|325207096|gb|ADZ02548.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis NZ-05/33]
          Length = 421

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|312233708|gb|ADQ53974.1| putative conjugative transfer protein [Vibrio harveyi]
          Length = 699

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-GAE 65
            +G  GAGK+  +  L R+++++     V  +     +   + ++ +LL+   +     +
Sbjct: 203 IDGTTGAGKSVMLRKLLRWIRKRGDKAIVYDKGCTFTSKFFDPSQDILLNPFDERCANWD 262

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                  A   +++ N + P   EG    +   R + SS AY+  +D+        L  I
Sbjct: 263 VWCDAKEAPDFENIANALIPQHGEGDPFWVDSARTIFSSAAYRMSQDNKPCSTARLLSLI 322

Query: 124 SVQEVM 129
              E+ 
Sbjct: 323 LTSELE 328


>gi|297831946|ref|XP_002883855.1| hypothetical protein ARALYDRAFT_480365 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329695|gb|EFH60114.1| hypothetical protein ARALYDRAFT_480365 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 277

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 42/152 (27%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L + L +K    +                 +L      
Sbjct: 99  QKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCY-----------------ILDGDNVR 141

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
            G   +    A  R +++     V +     G I +      S  + Y+ +RD       
Sbjct: 142 HGLNRDLSFKAEDRAENIRRVGEVAKLFADAGIICIA-----SLISPYRTDRD------- 189

Query: 118 DSLQEISVQEVMP--DCT-IILDLPVDIGLKR 146
                 + + ++P  D   + +D+P+++   R
Sbjct: 190 ------ACRNLLPEGDFVEVFMDVPLEVCEAR 215


>gi|296437841|gb|ADH20002.1| cytidylate kinase [Chlamydia trachomatis G/11074]
          Length = 216

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|294661294|ref|YP_003573170.1| hypothetical protein Aasi_1773 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336445|gb|ACP21042.1| hypothetical protein Aasi_1773 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 442

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L  +L+R+N  V +       PAA       L     +   E  + V
Sbjct: 106 GLQGSGKTTFSAKLANYLKRQNKSVLLVACDIYRPAAAEQ----LHVLGQQIDVEVFSKV 161

Query: 71  FAAARLDHVENVIRPALMEGK-ILLCD 96
                +   +  I  A    K +++ D
Sbjct: 162 DHKDAIQIAQEGIEYAKNTHKQVVIID 188


>gi|226306495|ref|YP_002766455.1| guanylate kinase [Rhodococcus erythropolis PR4]
 gi|226185612|dbj|BAH33716.1| guanylate kinase [Rhodococcus erythropolis PR4]
          Length = 199

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 44/219 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  +   G    GK++ +  L+  L    + V   TR+P                   
Sbjct: 15  RRGRLVVLAGPSAVGKSSVVRELRTRLPELVFSVSATTRDPRPGEVDGKDYRFTSREEFQ 74

Query: 61  EFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                 E + +A       R       I  AL  GK +L                    +
Sbjct: 75  RMIDSGELLEWAEIHGGLQRSGTPAAPIEEALEAGKPVL--------------------V 114

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            +D     +V++ MP+  ++   P   D+ ++R+  R +  E       E        + 
Sbjct: 115 EVDLAGARAVRKAMPEALLVFMAPPSWDVLVQRLTGRGTETEDVVARRLETA------RV 168

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                ++A        IV+     + V+     +V  LV
Sbjct: 169 -----ELAAQDEFDTVIVN-----EDVSRACDELVSLLV 197


>gi|261379167|ref|ZP_05983740.1| signal recognition particle-docking protein FtsY [Neisseria cinerea
           ATCC 14685]
 gi|269144353|gb|EEZ70771.1| signal recognition particle-docking protein FtsY [Neisseria cinerea
           ATCC 14685]
          Length = 347

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 154 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 208

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 209 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 259

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 260 AMPDAPHEIIVVLD 273


>gi|225076774|ref|ZP_03719973.1| hypothetical protein NEIFLAOT_01825 [Neisseria flavescens
           NRL30031/H210]
 gi|224951872|gb|EEG33081.1| hypothetical protein NEIFLAOT_01825 [Neisseria flavescens
           NRL30031/H210]
          Length = 419

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 226 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 280

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 281 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 331

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 332 AMPDAPHEIIVVLD 345


>gi|126662408|ref|ZP_01733407.1| Deoxynucleoside kinase subfamily, putative [Flavobacteria bacterium
           BAL38]
 gi|126625787|gb|EAZ96476.1| Deoxynucleoside kinase subfamily, putative [Flavobacteria bacterium
           BAL38]
          Length = 204

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 60/197 (30%), Gaps = 34/197 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL +  +          EP      +   +  L     +   E 
Sbjct: 3   IAVAGNIGAGKTTLTKLLAKHFK---------WEP---HFEDVVDNPYLDDFYHQM--ER 48

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQHLF 116
            +       L+     +      GK ++ DR  + D+        +      RD + +  
Sbjct: 49  WSFNLQIYFLNSRFRQVLQIRESGKNIIQDRTIYEDAHIFAPNLHAMGLMSNRDYTNYTS 108

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L  L E  V    PD  I L          + N  S       DY     +    +  + 
Sbjct: 109 LFELMESLVGA--PDLLIYL-------RSSIPNLVSQIHKRGRDYENSISIEYLSRLNER 159

Query: 177 FLDIARN-QPDRCHIVD 192
           +    +     +  I+D
Sbjct: 160 YEAWIQTYDKGKLVIID 176


>gi|94988039|ref|YP_596140.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS9429]
 gi|94541547|gb|ABF31596.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS9429]
          Length = 226

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 73/229 (31%), Gaps = 44/229 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52
              + I   G   +GK+T + ++    ++  Y       V    +  G    EA R    
Sbjct: 27  KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 82

Query: 53  --VLLSCGVDEFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +L + G  +    +E +       A        +I+  L   +    D        + 
Sbjct: 83  NQILKADGELDRTKLSEMLFSNPNNMATSSAIQNQIIKEELAAKR----D--------HL 130

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            +  +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         + 
Sbjct: 131 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 188

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                      L I   +P    ++D+    +++   + + +  L   R
Sbjct: 189 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 226


>gi|21244053|ref|NP_643635.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109675|gb|AAM38171.1| ATP sulfurylase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 658

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + I  
Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFIE- 589

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 590 --------VFVDVPLAVAEAR 602


>gi|15605179|ref|NP_219965.1| cytidylate kinase [Chlamydia trachomatis D/UW-3/CX]
 gi|9910743|sp|O84458|KCY_CHLTR RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|3328885|gb|AAC68052.1| CMP Kinase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748583|gb|ADI51129.1| Cytidylate kinase [Chlamydia trachomatis D-EC]
 gi|297749463|gb|ADI52141.1| Cytidylate kinase [Chlamydia trachomatis D-LC]
          Length = 216

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|284030673|ref|YP_003380604.1| adenylylsulfate kinase [Kribbella flavida DSM 17836]
 gi|283809966|gb|ADB31805.1| adenylylsulfate kinase [Kribbella flavida DSM 17836]
          Length = 493

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
            GL + F G+ G+GK+T    L   L      V +          +  R +L S 
Sbjct: 283 RGLVVFFTGLSGSGKSTLAKGLAEQLAGAGRSVTLL-------DGDVVRRMLSSG 330


>gi|281341158|gb|EFB16742.1| hypothetical protein PANDA_005138 [Ailuropoda melanoleuca]
          Length = 604

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 39  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 84

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 85  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 132

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 133 FFEVFVDAPLHVCEQR 148


>gi|217964290|ref|YP_002349968.1| dephospho-CoA kinase [Listeria monocytogenes HCC23]
 gi|217333560|gb|ACK39354.1| dephospho-CoA kinase [Listeria monocytogenes HCC23]
          Length = 200

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 78/216 (36%), Gaps = 32/216 (14%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60
           G+ G+   GK+T  +++++    L   +       EPG     E        +LL+ G  
Sbjct: 6   GLTGSVATGKSTVSNMIQQAGIPLVDADVAARKVVEPGTEGLKEIVAYFGGEILLADGTL 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E I     + + +  +  P + +  +   +RF  +    +        LF   L
Sbjct: 66  DRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFRAGE--ELVFFDIPLLFESHL 123

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179
           + +  Q V     +      +  LKR+  R +L +   L   E + + I EK R+  F  
Sbjct: 124 ESLVDQIV----VVW--TTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                     ++D+  S +     +   +   V+ +
Sbjct: 175 ----------VIDNNESLEKTQKQVYTFIERFVKNK 200


>gi|160941491|ref|ZP_02088825.1| hypothetical protein CLOBOL_06381 [Clostridium bolteae ATCC
          BAA-613]
 gi|158435575|gb|EDP13342.1| hypothetical protein CLOBOL_06381 [Clostridium bolteae ATCC
          BAA-613]
          Length = 260

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M SG FIS  G  G GK+T + L+ 
Sbjct: 36 MKSGEFISLVGPSGCGKSTILRLVA 60


>gi|110799126|ref|YP_694533.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens ATCC 13124]
 gi|170764105|ref|ZP_02632153.2| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens E str. JGS1987]
 gi|87312655|gb|ABD37693.1| deoxyadenosine kinase [Clostridium perfringens]
 gi|110673773|gb|ABG82760.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens ATCC 13124]
 gi|170662358|gb|EDT15041.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens E str. JGS1987]
          Length = 203

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74
           K+T +++L          +    EP          + +L     +    +  +   F   
Sbjct: 12  KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 58

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127
           R  H++      L+E    + DR +     +         + ++        L+ +    
Sbjct: 59  RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 113

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186
             P   + L++ VD  +KR+Q R    E       ER+     EK    + +   N    
Sbjct: 114 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 166

Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223
               ++     F++V  +    V  L+ +++S L + K
Sbjct: 167 PILRINVDELDFENVPED-REYVLNLIDEKLSELENNK 203


>gi|302385090|ref|YP_003820912.1| ABC transporter [Clostridium saccharolyticum WM1]
 gi|302195718|gb|ADL03289.1| ABC transporter related protein [Clostridium saccharolyticum WM1]
          Length = 234

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 8/50 (16%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAE 48
          +N G FI   G  G+GK+T +++L         +     T    GTP + 
Sbjct: 31 INRGEFIVILGPSGSGKSTLLNIL------GGIETVTGGTVYYDGTPLSW 74


>gi|300175321|emb|CBK20632.2| Arginine/ornithine transport system ATPase [Blastocystis hominis]
          Length = 388

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK+T    L   L  + + V  +  +P     GG+   +  R + L+   + F  
Sbjct: 115 GPPGAGKSTFCEALGTLLTSQGHRVAVLAIDPSSTRSGGSLLGDKTRMLKLAYDPNAFVR 174

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94
            + +        +H  +++      G  I++
Sbjct: 175 PSPSNCSLGGVAEHTSDLVMLCEAAGYDIVI 205


>gi|269303122|gb|ACZ33222.1| adenylate kinase [Chlamydophila pneumoniae LPCoLN]
          Length = 213

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 28/154 (18%)

Query: 1   MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G +FI   G  G+GK T    L   +         T         +  R ++     
Sbjct: 1   MTKGSVFIIM-GPPGSGKGTQSQYLANRI---GLPHIST--------GDLLRAIIQEGTP 48

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLF 116
           +   A+A     A    D V  +++  L      K  + D F  +      +        
Sbjct: 49  NGLKAKAYLDKGAFVPSDFVWEILKEKLQSQACSKGCIIDGFPRTL----DQAHLLDSFL 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
           +D     +         I L++  D  LKRV +R
Sbjct: 105 MDVHSNYT--------VIFLEISEDEILKRVCSR 130


>gi|299821484|ref|ZP_07053372.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Listeria grayi DSM 20601]
 gi|299817149|gb|EFI84385.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Listeria grayi DSM 20601]
          Length = 364

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT + L+  FL+  +  +H+
Sbjct: 31 RGKFYTLLGPSGCGKTTILRLIAGFLEATDGKIHL 65


>gi|205373693|ref|ZP_03226496.1| hypothetical protein Bcoam_10710 [Bacillus coahuilensis m4-4]
          Length = 255

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          N G  + FEG + AGK   I  L   L  +  +VH T  P 
Sbjct: 53 NKGCILVFEGWDAAGKGGTIKRLTEGLDPRGIEVHATAAPT 93


>gi|254448895|ref|ZP_05062350.1| guanylate kinase [gamma proteobacterium HTCC5015]
 gi|198261432|gb|EDY85722.1| guanylate kinase [gamma proteobacterium HTCC5015]
          Length = 203

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 47/171 (27%), Gaps = 32/171 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G   +     GAGKT+ +  L   ++     V H TRE             +     
Sbjct: 1   MAKGTLYTISAPSGAGKTSLVKALLDSVEGIGVSVSHTTREKRPGEEHGVDYFFVSHEAF 60

Query: 60  DEF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                  A  E       R    +  +   L  G+ ++                      
Sbjct: 61  IAMVEDSAFLEHAQVFRNRYGTSQKAVEETLQSGRDVIL---------------EIDWQG 105

Query: 117 LDSLQEISVQEVMPDCT---IILDLPVDIGL--KRVQNRYSLRESACLDYF 162
           +  +++     + PDC    I   +P  +     R++ R S  +       
Sbjct: 106 MQQVKK-----LRPDCVAVSI---VPPSLAALEARLRGRESDSDEEIAHRM 148


>gi|149698484|ref|XP_001503628.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthetase 1 (PAPS synthetase 1) (PAPSS
           1) (Sulfurylase kinase 1) (SK1) (SK 1) [Equus caballus]
          Length = 603

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 38  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 84  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 132 FFEVFVDAPLHVCEQR 147


>gi|118443732|ref|YP_877898.1| ABC-type multidrug/protein/lipid transport system, ATPase
           [Clostridium novyi NT]
 gi|118134188|gb|ABK61232.1| ABC-type multidrug/protein/lipid transport system, ATPase
           [Clostridium novyi NT]
          Length = 619

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-------- 53
             G  I+  G  GAGKTT I+LL RF +  +  + +  E       E  R +        
Sbjct: 397 KKGETIAIVGPTGAGKTTLINLLMRFYEINSGTITIDGEDIRNLKRENLRSIFGMVLQDT 456

Query: 54  -LLSCGVDEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            L +  + E  A       E  +  AA+  H ++ IR  L  G   + D
Sbjct: 457 WLFNGTIRENIAYGVENATEEDIINAAKAAHADHFIR-TLEHGYDTVLD 504


>gi|126700208|ref|YP_001089105.1| guanylate kinase [Clostridium difficile 630]
 gi|254976180|ref|ZP_05272652.1| guanylate kinase [Clostridium difficile QCD-66c26]
 gi|255093569|ref|ZP_05323047.1| guanylate kinase [Clostridium difficile CIP 107932]
 gi|255101753|ref|ZP_05330730.1| guanylate kinase [Clostridium difficile QCD-63q42]
 gi|255307621|ref|ZP_05351792.1| guanylate kinase [Clostridium difficile ATCC 43255]
 gi|255315314|ref|ZP_05356897.1| guanylate kinase [Clostridium difficile QCD-76w55]
 gi|255517981|ref|ZP_05385657.1| guanylate kinase [Clostridium difficile QCD-97b34]
 gi|255651097|ref|ZP_05397999.1| guanylate kinase [Clostridium difficile QCD-37x79]
 gi|260684162|ref|YP_003215447.1| guanylate kinase [Clostridium difficile CD196]
 gi|260687821|ref|YP_003218955.1| guanylate kinase [Clostridium difficile R20291]
 gi|306520948|ref|ZP_07407295.1| guanylate kinase [Clostridium difficile QCD-32g58]
 gi|119371204|sp|Q182S8|KGUA_CLOD6 RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|115251645|emb|CAJ69478.1| Guanylate kinase (GMP kinase) [Clostridium difficile]
 gi|260210325|emb|CBA64654.1| guanylate kinase [Clostridium difficile CD196]
 gi|260213838|emb|CBE05828.1| guanylate kinase [Clostridium difficile R20291]
          Length = 205

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL +   G  GAGK T    L +        V   TR+P            +     +
Sbjct: 4   KKGLLLVVSGPSGAGKGTICKELLKENDTIKLSVSATTRKPRTGEVDGVNYFFISKEKFE 63

Query: 61  EFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           E   + E + +A          +  I   L +G+ +L +         QG +        
Sbjct: 64  EMIEKGEFLEYAQIYDNFYGTPKAAIMECLEKGQDVLLE------IEMQGAK-------- 109

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
             ++E+  +        I  LP   +    R+  R +  E+     F
Sbjct: 110 -QIKEVCPEG-----VFIFVLPPSLEELKNRIVGRGTETEAEIEKRF 150


>gi|6754982|ref|NP_035993.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Mus
           musculus]
 gi|6647719|sp|Q60967|PAPS1_MOUSE RecName: Full=Bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1; Short=PAPS synthase 1; Short=PAPSS 1;
           AltName: Full=Sulfurylase kinase 1; Short=SK 1;
           Short=SK1; Includes: RecName: Full=Sulfate
           adenylyltransferase; AltName: Full=ATP-sulfurylase;
           AltName: Full=Sulfate adenylate transferase; Short=SAT;
           Includes: RecName: Full=Adenylyl-sulfate kinase;
           AltName: Full=3'-phosphoadenosine-5'-phosphosulfate
           synthase; AltName: Full=APS kinase; AltName:
           Full=Adenosine-5'-phosphosulfate 3'-phosphotransferase;
           AltName: Full=Adenylylsulfate 3'-phosphotransferase
 gi|1109676|gb|AAC52328.1| ATP sulfurylase/APS kinase [Mus musculus]
 gi|74138830|dbj|BAE27221.1| unnamed protein product [Mus musculus]
 gi|74139533|dbj|BAE40904.1| unnamed protein product [Mus musculus]
 gi|74142227|dbj|BAE31878.1| unnamed protein product [Mus musculus]
 gi|74223304|dbj|BAE40782.1| unnamed protein product [Mus musculus]
 gi|148680251|gb|EDL12198.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1, isoform CRA_b
           [Mus musculus]
 gi|1586680|prf||2204316A ATP sulfurylase-adenosine phosphosulfate kinase
          Length = 624

 Score = 39.2 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|312109950|ref|YP_003988266.1| dephospho-CoA kinase [Geobacillus sp. Y4.1MC1]
 gi|311215051|gb|ADP73655.1| dephospho-CoA kinase [Geobacillus sp. Y4.1MC1]
          Length = 199

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 30/211 (14%)

Query: 11  GIEG---AGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G+ G   +GK+T   +++          +   DV    E       +A    +L    + 
Sbjct: 6   GLTGGIASGKSTVTKMIRELGIPVIDADQIARDVVKMGEEAYNQIIQAFGQKILQEDGEI 65

Query: 62  FGAEAEAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             A+  AIVF        +  ++ PA+         R L    AY  +   +  L +  L
Sbjct: 66  DRAKLGAIVFHNEQERKKLNAIVHPAVRR-------RMLAEKEAYVQKGAKTVVLDIPLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E  +  ++ D TI++ +  D+ L+R+  R    +   L    +  + + EK ++     
Sbjct: 119 FESELTHLV-DKTIVVYVDDDVQLERLMKRNGFSKEEALARI-QAQMPLREKVKK----- 171

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           A        ++D+  + +     +  I    
Sbjct: 172 ADA------VIDNNGTIEETKQQLWQIFKRW 196


>gi|148906335|gb|ABR16323.1| unknown [Picea sitchensis]
          Length = 269

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 18/127 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
           G  G+GK+T+   L++  +     VH+       E      A   R ++ L   +DE   
Sbjct: 9   GPAGSGKSTYCYNLQQHCESIGRSVHIVNLDPAAEDFKYSVAIDIRELISLEDVMDELNL 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-------HLFL 117
                +     ++H+E  +   L E    L D   D    +                 F+
Sbjct: 69  GPNGGLIYC--MEHLEENLEDWLAEQ---LEDYLDDDYLVFDCPGQIELYSHIPVFRTFV 123

Query: 118 DSLQEIS 124
           D L+  +
Sbjct: 124 DQLRRWN 130


>gi|239617173|ref|YP_002940495.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1]
 gi|239617190|ref|YP_002940512.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1]
 gi|239506004|gb|ACR79491.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1]
 gi|239506021|gb|ACR79508.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1]
          Length = 209

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG-- 58
             G F+  +G+ G+GK+T + +L   +     +V    +EP   P       +++     
Sbjct: 28  KKGEFVYIKGLNGSGKSTLLKILCGLIPPTTGNVSVFGKEPHRNPEILKRLGIVIDGMGL 87

Query: 59  VDEFGAEAEAIVFA 72
             E       ++FA
Sbjct: 88  YRELSLRENILLFA 101


>gi|218898082|ref|YP_002446493.1| hypothetical protein BCG9842_B2224 [Bacillus cereus G9842]
 gi|218544280|gb|ACK96674.1| hypothetical protein BCG9842_B2224 [Bacillus cereus G9842]
          Length = 282

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|126649539|ref|ZP_01721780.1| UDP-galactose-lipid carrier transferase [Bacillus sp. B14905]
 gi|126593864|gb|EAZ87787.1| UDP-galactose-lipid carrier transferase [Bacillus sp. B14905]
          Length = 269

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 39/158 (24%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL + FEG++ AGK   I  L   +  + Y VH    P                      
Sbjct: 43  GLILVFEGMDAAGKGGAIKRLIERVDPRGYVVHPISAPQPHEL----------------- 85

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122
                      R ++++   R     G+I + DR        +  E  +++  +  + +E
Sbjct: 86  -----------RYNYLQRFWRKLPQHGQIAVFDRSWYGRVLVERIEGFATKDEWSRAYEE 134

Query: 123 ISVQEVMPDCT--------IILDLPVDIGLKRVQNRYS 152
           I+  E +   T          L +  +  LKR + R  
Sbjct: 135 INNFEKI--LTAGDYIIIKFWLHVSDEEQLKRFKEREQ 170


>gi|74002085|ref|XP_863048.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthethase 1 (PAPS synthethase 1)
           (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 3
           [Canis familiaris]
          Length = 600

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 60  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 154 FFEVFVDAPLHVCEQR 169


>gi|20090290|ref|NP_616365.1| hypothetical protein MA1430 [Methanosarcina acetivorans C2A]
 gi|19915289|gb|AAM04845.1| hypothetical protein MA_1430 [Methanosarcina acetivorans C2A]
          Length = 237

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCG- 58
           +  G F    G  GAGKTT + L+   L+     V V+         +  + V +LS   
Sbjct: 27  LKKGEFAVIFGPNGAGKTTLLKLISTLLEPTGGSVFVSGFNVSEEPEKVRKEVGMLSHDS 86

Query: 59  --VDEFGAEAEAIVF 71
               E  A      F
Sbjct: 87  YLYGELTARENLHFF 101


>gi|222823354|ref|YP_002574928.1| adenylylsulfate kinase [Campylobacter lari RM2100]
 gi|222538576|gb|ACM63677.1| adenylylsulfate kinase [Campylobacter lari RM2100]
          Length = 168

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M     I   G+ G+GK+T    L   L+R+  ++            +  R +L   G D
Sbjct: 1  MKKPYVIWLTGLAGSGKSTIGRALYEKLKRECENIIYL-------DGDELRELLGHYGYD 53

Query: 61 EFGAEAEAI 69
          + G    A+
Sbjct: 54 KQGRIDVAL 62


>gi|328772508|gb|EGF82546.1| hypothetical protein BATDEDRAFT_4816 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 259

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 33/145 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAAR-------HVLL 55
           LF++  G +G+GKTT +  L + L ++     V ++ +      AE          + LL
Sbjct: 2   LFVALSGPQGSGKTTLVKELVKELDQRVGLKAVALSADDLYLTHAEQVILANTHKSNTLL 61

Query: 56  S----CGVDEFGAEAEAIVFAAARLDHVENVI-RPALMEGKILLCDRFLDSSYAYQGERD 110
                 G        + +   A + +H+ N +  P              D S  YQG  D
Sbjct: 62  QYRGLPGTHGISLGVQVLSHLARQNEHINNSVSIPC------------YDKSL-YQGRGD 108

Query: 111 SSQHLFLDSLQEISVQEVMPDCTII 135
                 +D L   +V   + D  + 
Sbjct: 109 R-----MDELHWKTVTGPV-DIVLF 127


>gi|326789654|ref|YP_004307475.1| Taurine-transporting ATPase [Clostridium lentocellum DSM 5427]
 gi|326540418|gb|ADZ82277.1| Taurine-transporting ATPase [Clostridium lentocellum DSM 5427]
          Length = 277

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 8/59 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +N G FIS  G  G GKTT + ++   LQ          E   T   E  R + L    
Sbjct: 54  INQGEFISLLGPSGCGKTTLLRIIADLLQ--------PTEGSITVRGETPRSIRLQKKY 104


>gi|289551638|ref|YP_003472542.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus
           lugdunensis HKU09-01]
 gi|289181169|gb|ADC88414.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus
           lugdunensis HKU09-01]
          Length = 224

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 50/168 (29%), Gaps = 29/168 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L   L     +   + E              L    D+F   +
Sbjct: 12  ITIAGTVGVGKSTLTRALADKL-----NFKTSFENVDQNP-------YLDKFYDDFERWS 59

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117
             +   F A R        +     G   + DR +      +A     QG          
Sbjct: 60  FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHQEQGTMSPEDFQTY 115

Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDY 161
             L   + +      PD  I L+   D  ++R++ R    E     DY
Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECNYDEVIERIKQRGRDMEINTEPDY 163


>gi|227499521|ref|ZP_03929628.1| guanylate kinase [Anaerococcus tetradius ATCC 35098]
 gi|227218400|gb|EEI83651.1| guanylate kinase [Anaerococcus tetradius ATCC 35098]
          Length = 202

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 4/98 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M  G  +   G  G GK T +  L        Y V   TR+         +         
Sbjct: 1  MKKGFLLVISGPSGVGKGTVLHDLMNTQSNLVYSVSATTRKKRDGEIEGVSYFYKSHEEF 60

Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94
          ++   E + + +A    ++    +  +   + EGKI++
Sbjct: 61 EKMIEEDKFLEYAHVHNNYYGTPKEFVENKINEGKIVI 98


>gi|222479157|ref|YP_002565394.1| PilT protein domain protein [Halorubrum lacusprofundi ATCC 49239]
 gi|222452059|gb|ACM56324.1| PilT protein domain protein [Halorubrum lacusprofundi ATCC 49239]
          Length = 633

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
             G+ IS  G  GAGK+T    +  FL   +Y V    +P         
Sbjct: 261 KRGVLIS--GSPGAGKSTFAQAVAEFLNDNDYAVKTMEKPRDLQVGPEI 307


>gi|148643420|ref|YP_001273933.1| signal recognition particle protein Srp54 [Methanobrevibacter
           smithii ATCC 35061]
 gi|222445662|ref|ZP_03608177.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii
           DSM 2375]
 gi|288869608|ref|ZP_05975207.2| signal recognition particle protein [Methanobrevibacter smithii DSM
           2374]
 gi|148552437|gb|ABQ87565.1| signal recognition particle GTPase SRP54 [Methanobrevibacter
           smithii ATCC 35061]
 gi|222435227|gb|EEE42392.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860574|gb|EFC92872.1| signal recognition particle protein [Methanobrevibacter smithii DSM
           2374]
          Length = 447

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53
           I F G++G+GKTT I  L R+LQ+K ++  V       PAA E  R +
Sbjct: 104 ILFLGLQGSGKTTTIGKLCRYLQKKGFNPAVVCTDTWRPAAYEQLRQL 151


>gi|108763441|ref|YP_631530.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622]
 gi|108467321|gb|ABF92506.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622]
          Length = 204

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 62/186 (33%), Gaps = 22/186 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    FI+  G  GAGKT   S L R      Y +  + EP             L+    
Sbjct: 1   MARKKFIAIAGNIGAGKTELTSFLCRK-----YGLTPSFEPNDQNP-------YLADFYK 48

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQ 113
           +   +  A       L H   + R        +L DR  + D+     +   Q   D   
Sbjct: 49  DM--KTWAFRSQLFFLTHKFRLHRELERTSGTVLQDRTLYEDAEIFAKNLHRQRLIDKRD 106

Query: 114 HLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                 L E   + + P D  I L  PV    +R++ R    E      + ++   ++E+
Sbjct: 107 WKTYCELYETISESLRPPDLMIYLRCPVQTIRERIRIRGRAMERDIPTRYLQRLNALYEE 166

Query: 173 RRQIFL 178
             + + 
Sbjct: 167 WFEGYR 172


>gi|147902487|ref|NP_001086938.1| deoxycytidine kinase, gene 2 [Xenopus laevis]
 gi|37780365|gb|AAO64435.1| deoxycytidine kinase 2 [Xenopus laevis]
 gi|50417985|gb|AAH77796.1| Dck-prov protein [Xenopus laevis]
          Length = 264

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 62/186 (33%), Gaps = 32/186 (17%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQR---------KNYDVHVTR-EPGGTPAAEAARHVLLSC 57
           S EG   AGK+T + +L++             K  +V  T  E      ++ +   LL  
Sbjct: 26  SIEGNIAAGKSTFVRILEKASDEWEVVPEPIAKWCNVQTTENENEELSTSQKSGGNLLQM 85

Query: 58  GVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI--------LLCDRFLD--SSY 103
             D+    A      A     R         P L+E +         +  DR++   S +
Sbjct: 86  LYDKPTRWAYTFQTYACLSRVRAQL--KTPSPKLLEAEHPVQFFERSVYSDRYIFASSLF 143

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDC----TIILDLPVDIGLKRVQNRYSLRESA-C 158
            +Q   ++   ++ D      + +   D      I L    +  + R+  R    E    
Sbjct: 144 EFQNINETEWAIYQDW-HTWFLNQFESDIDLDGIIYLRATPEKCMDRLHTRGREEEQGIQ 202

Query: 159 LDYFER 164
           L+Y E 
Sbjct: 203 LEYLES 208


>gi|58616346|ref|YP_195476.1| transposition helper protein [Azoarcus sp. EbN1]
 gi|56315808|emb|CAI10452.1| transposition helper protein [Aromatoleum aromaticum EbN1]
          Length = 265

 Score = 39.2 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKT  I+ L   L  + Y V  TR        +AAR  L            + ++
Sbjct: 110 GPPGVGKTHLIASLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELAKLDRFDLLI 169

Query: 71  ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
              F+  R D  E  +   L      + +R+   S A
Sbjct: 170 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 200


>gi|319946146|ref|ZP_08020389.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus australis ATCC 700641]
 gi|319747675|gb|EFV99925.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus australis ATCC 700641]
          Length = 252

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 29/164 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLSCGVDE 61
           FI+  G  GAGK+T  + L   L   +  V +  E     G    A+    V     +  
Sbjct: 37  FITILGGNGAGKSTLFNTLAGTLPLTSGQVLIKGEDVTHYGPEKRAKYLSRVFQDPKMGT 96

Query: 62  FGAEA--EAIVFAAARLD---HVENVIRPALMEGKILLC------DRFLDSSYAY-QGER 109
                  E ++ A  R +    V   +     E K +L       +R +D+S  +  G +
Sbjct: 97  APRMTVAENLLIAKFRGEKRGLVPRRLAQYKDEFKEVLSQIGNGLERHVDTSVEFLSGGQ 156

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQ 148
             +  L + +L+        P+  ++LD     L        ++
Sbjct: 157 RQALSLLMATLK-------RPEL-LLLDEHTAALDPKTSQALME 192


>gi|256843874|ref|ZP_05549361.1| deoxyguanosine kinase [Lactobacillus crispatus 125-2-CHN]
 gi|256613779|gb|EEU18981.1| deoxyguanosine kinase [Lactobacillus crispatus 125-2-CHN]
          Length = 228

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 31/168 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121
           +  A +     L+   + I+ AL E   +L DR +   +  +Q   D  +     +D+  
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106

Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           E+    + E+       PD  + +++  D  +KR+Q R    E    D
Sbjct: 107 ELLHNMMGELERMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD 154


>gi|242082796|ref|XP_002441823.1| hypothetical protein SORBIDRAFT_08g002910 [Sorghum bicolor]
 gi|241942516|gb|EES15661.1| hypothetical protein SORBIDRAFT_08g002910 [Sorghum bicolor]
          Length = 1122

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 27/91 (29%), Gaps = 11/91 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA---RHVLLSCGVDEFGAEA- 66
           G  G GKTT +  L   L      V    E  G   +          +            
Sbjct: 159 GPPGCGKTTLLKALAGKLSTSGLKVTGEVEYNGVELSGFVPEKTAAYIDQYDLHVPEMTV 218

Query: 67  -EAIVFAA------ARLDHVENVIRPALMEG 90
            E I F+A       R + ++ VIR     G
Sbjct: 219 RETIDFSARFQGVGNRAEIMKEVIRREKEAG 249


>gi|172048109|sp|A5UMY7|SRP54_METS3 RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
          Length = 445

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53
           I F G++G+GKTT I  L R+LQ+K ++  V       PAA E  R +
Sbjct: 102 ILFLGLQGSGKTTTIGKLCRYLQKKGFNPAVVCTDTWRPAAYEQLRQL 149


>gi|78777990|ref|YP_394305.1| guanylate kinase [Sulfurimonas denitrificans DSM 1251]
 gi|119371317|sp|Q30PL1|KGUA_SULDN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|78498530|gb|ABB45070.1| guanylate kinase [Sulfurimonas denitrificans DSM 1251]
          Length = 206

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 42/200 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G  +   G  GAGK++ I  +   +    + +  T  P      +   +  +S    +
Sbjct: 4   KTGAILVLSGPSGAGKSSLIKEVIDDIGECYFSISTTTRPIREGEVDGVHYHFVSESEFK 63

Query: 62  FGAEAEAIV-FAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
              E E  + +A    ++    I+P   AL  GK+++ D                    +
Sbjct: 64  KDIEDEFFLEYAVVHSNYYGTSIKPVKKALKSGKLVIFD-----------IDVQGNATII 112

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + L +I+             +     L  ++ R   R +   D  ER+            
Sbjct: 113 NRLGDITTSVF---------ISPPT-LSELKKRLEARSTDTKDVIERR------------ 150

Query: 178 LDIARNQPDR-----CHIVD 192
           +++A+ +  R       IV+
Sbjct: 151 IEMAKREMQRVSEYDFLIVN 170


>gi|78780067|ref|YP_398179.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus str. MIT 9312]
 gi|108860874|sp|Q318F2|PANCY_PROM9 RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|78713566|gb|ABB50743.1| cytidylate kinase [Prochlorococcus marinus str. MIT 9312]
          Length = 510

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 9/65 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---------HVTREPGGTPAAEAAR 51
           M     I+ +G  G+GK+T   L+ + L+    D           + +E       +  +
Sbjct: 279 MKRSPIIAIDGPAGSGKSTVTQLIAKKLKLLYLDTGAMYRALSWLLIKENIDYKEEKKLQ 338

Query: 52  HVLLS 56
           ++L  
Sbjct: 339 NILKD 343


>gi|325197349|gb|ADY92805.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis G2136]
 gi|325203177|gb|ADY98630.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis M01-240355]
          Length = 421

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|301168437|emb|CBW28027.1| putative adenylate kinase (ATP-AMP transphosphorylase)
           [Bacteriovorax marinus SJ]
          Length = 212

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 58/231 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GK T    +   L    Y    T         +  R+ +      E G + + I+
Sbjct: 9   GAPGTGKGTQAKKIVENL---GYSHVST--------GDLLRNEI--AKDSELGKKVKGII 55

Query: 71  FAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
               R D V + V+   L     +      +S+Y + G   + +   L  L+E  ++   
Sbjct: 56  ---DRGDLVNDQVVLELLNANCDI-----ENSAYIFDGFPRNIEQAQL--LEEHVLKGA- 104

Query: 130 PD-CTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFERKDVMI 169
            D   I  ++ +++ ++R+ NR    +S  +                   D   RKD   
Sbjct: 105 -DSKAIYFNIDLEVLVERISNRRIAPKSGEIYNLLSRPPKVEGKCDVSGEDLIHRKDDNA 163

Query: 170 HEKRRQIFLDIARN---------QPDRCHI-VDSAHSFQSVATNILNIVWE 210
            E  R   L++ +N         +     + +D++ S   V   ++  V +
Sbjct: 164 -ETVRNR-LEVFKNTIAPILDYYESKGVLVSIDASRSADEVYGLVVEAVNK 212


>gi|284928958|ref|YP_003421480.1| Excinuclease ABC subunit A [cyanobacterium UCYN-A]
 gi|284809417|gb|ADB95122.1| Excinuclease ABC subunit A [cyanobacterium UCYN-A]
          Length = 951

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL 55
           G  ++  G+ G+GK+T I  LL   LQ      +   +        E    V++
Sbjct: 644 GKLVTITGVSGSGKSTLIKRLLYPALQNHLTKKIPFPKYLSEVKGLELIDKVII 697


>gi|256424173|ref|YP_003124826.1| ABC transporter [Chitinophaga pinensis DSM 2588]
 gi|256039081|gb|ACU62625.1| ABC transporter related [Chitinophaga pinensis DSM 2588]
          Length = 549

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           FI   G  G GKTT I+LL    + +   V +  E
Sbjct: 363 FIV--GGNGCGKTTFINLLTALCRAQGGKVFIDEE 395


>gi|28211497|ref|NP_782441.1| dithiobiotin synthetase [Clostridium tetani E88]
 gi|75542099|sp|Q893G4|BIOD_CLOTE RecName: Full=Dethiobiotin synthetase; AltName: Full=DTB
          synthetase; Short=DTBS; AltName: Full=Dethiobiotin
          synthase
 gi|28203938|gb|AAO36378.1| dethiobiotin synthetase [Clostridium tetani E88]
          Length = 227

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M+ G+FI+  G +  GKT   +LL + L+++  + 
Sbjct: 1  MSKGVFITATGTD-VGKTYISALLVKKLKQQGINA 34


>gi|27526436|emb|CAC80070.1| phosphoribulokinase [Galdieria sulphuraria]
          Length = 448

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 33/177 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAE----A 68
           G GK+T +  +          V        TP  E    + L      +    AE    A
Sbjct: 123 GCGKSTFLRRVNEIF---GTKVSQ----SHTPQGELVTVICLDDFHTLDRKGRAEKKVTA 175

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           +   A   + +   I  AL EG  +     +   Y +Q          +     I ++ +
Sbjct: 176 LNPEANNFELMYQQI-AALKEGYDI-----MKPIYNHQ-TGLIDPPELIQPNHIIVIEGL 228

Query: 129 MP----------DCTIILDLPVDI----GLKRVQNRYSLRESACLDYFERKDVMIHE 171
            P          D T+ LD+  ++     ++R       +    L   E +     +
Sbjct: 229 HPWYDARMKQLLDFTVYLDISDEVKVAWKIQRDMAERGHKLENILASIESRKPDFQQ 285


>gi|304388845|ref|ZP_07370899.1| cell division protein FtsY [Neisseria meningitidis ATCC 13091]
 gi|304337211|gb|EFM03391.1| cell division protein FtsY [Neisseria meningitidis ATCC 13091]
 gi|325137247|gb|EGC59841.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis M0579]
 gi|325143381|gb|EGC65711.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis 961-5945]
 gi|325201235|gb|ADY96689.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis M01-240149]
 gi|325205143|gb|ADZ00596.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis M04-240196]
          Length = 421

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|289662109|ref|ZP_06483690.1| adenylate kinase [Xanthomonas campestris pv. vasculorum NCPPB702]
 gi|289668053|ref|ZP_06489128.1| adenylate kinase [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 187

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 69/208 (33%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T E       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  + + +   G   +      ++L  +  + 
Sbjct: 52  ----VMARGDLVSDDILLGMLEARLGQAD--VANGFILDGYPRNVAQA--NALDALLSEI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLARVDGVGSLDEVLERIRKAL 185


>gi|266623569|ref|ZP_06116504.1| polyphosphate:AMP phosphotransferase [Clostridium hathewayi DSM
          13479]
 gi|288864639|gb|EFC96937.1| polyphosphate:AMP phosphotransferase [Clostridium hathewayi DSM
          13479]
          Length = 498

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 18/30 (60%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          I FEG+  AGK T I+ L + L  + ++V 
Sbjct: 43 IVFEGMGAAGKGTQINRLIQALDPRGFEVF 72


>gi|260102016|ref|ZP_05752253.1| cobalt ABC superfamily ATP binding cassette transporter, ABC
          protein [Lactobacillus helveticus DSM 20075]
 gi|260084179|gb|EEW68299.1| cobalt ABC superfamily ATP binding cassette transporter, ABC
          protein [Lactobacillus helveticus DSM 20075]
          Length = 554

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREP 41
          G FI   G  G+GKTT ++ LK+ L  K     DV +T  P
Sbjct: 32 GDFIVIAGNTGSGKTTLLNHLKKELMPKGARTGDVQITETP 72


>gi|302876829|ref|YP_003845462.1| ABC transporter related [Clostridium cellulovorans 743B]
 gi|307687513|ref|ZP_07629959.1| ABC transporter, ATP-binding protein [Clostridium cellulovorans
          743B]
 gi|302579686|gb|ADL53698.1| ABC transporter related [Clostridium cellulovorans 743B]
          Length = 264

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTRE 40
            G FI+  G +GAGK+T ++++   +   +   V   RE
Sbjct: 30 KPGEFITIIGSDGAGKSTLLNIIAGAISPDQGEIVINKRE 69


>gi|254508809|ref|ZP_05120920.1| cell division protein FtsY [Vibrio parahaemolyticus 16]
 gi|219548266|gb|EED25280.1| cell division protein FtsY [Vibrio parahaemolyticus 16]
          Length = 412

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 215 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 270

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A  +G  +++ D
Sbjct: 271 TGADSASVIYDAIESAKAKGVDVVIAD 297


>gi|194880365|ref|XP_001974420.1| GG21726 [Drosophila erecta]
 gi|190657607|gb|EDV54820.1| GG21726 [Drosophila erecta]
          Length = 4023

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 28/119 (23%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G GK+T ++LLK+ L      VH       +      R   L     ++    
Sbjct: 1907 VVLVGPPGCGKSTIMALLKQALSGTQLKVHTISPKSMSRIQLLGR---LDADTRQWQDGV 1963

Query: 67   EAIVFAAARLD--HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                  A   +  HV             ++CD              S    ++++L  +
Sbjct: 1964 LTHTAVAVNQEPSHV----------HSWIVCD-------------GSIDPEWIEALNSV 1999


>gi|153836505|ref|ZP_01989172.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|149750103|gb|EDM60848.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
          Length = 129

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 19/94 (20%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M+    I   G+ G+GKTT    L +    K+++  +  E                 G  
Sbjct: 1  MSLAKLILIRGLPGSGKTTLAKRLVKDFDAKHFEADMYFEN--------------EKGEY 46

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
           F     +++  A          R  L +GKI++
Sbjct: 47 HFNP---SLLPQAHEW--CFEQTRKWLNKGKIVI 75


>gi|119872111|ref|YP_930118.1| GTP-binding signal recognition particle [Pyrobaculum islandicum DSM
           4184]
 gi|158512993|sp|A1RS43|SRP54_PYRIL RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|119673519|gb|ABL87775.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum
           islandicum DSM 4184]
          Length = 433

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
                +   G+EG+GKTT  + L R+L ++ Y V +  
Sbjct: 97  KKPYLVLLLGVEGSGKTTTAAKLARYLVKRGYRVGLVE 134


>gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|3334341|sp|O27376|SRP54_METTH RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 442

 Score = 39.2 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           I F G++G+GKTT I  L R+L++K + V V       PAA
Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142


>gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter
           marburgensis str. Marburg]
 gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter
           marburgensis str. Marburg]
          Length = 442

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           I F G++G+GKTT I  L R+L++K + V V       PAA
Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142


>gi|312140897|ref|YP_004008233.1| adenylate kinase [Rhodococcus equi 103S]
 gi|325675465|ref|ZP_08155149.1| adenylate kinase [Rhodococcus equi ATCC 33707]
 gi|311890236|emb|CBH49554.1| adenylate kinase [Rhodococcus equi 103S]
 gi|325553436|gb|EGD23114.1| adenylate kinase [Rhodococcus equi ATCC 33707]
          Length = 181

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 62/214 (28%), Gaps = 51/214 (23%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG------TPAAEAARHVLLSCGVDE 61
              G  GAGK T  ++L   L         T +         TP    A+  L      +
Sbjct: 4   VLLGPPGAGKGTQAAILSEKL---GVPHISTGDLFRANIGQETPLGLEAKKYL---DAGD 57

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHLFLD 118
                       AR      V  P    G   L D   R +D + A +G  +        
Sbjct: 58  LVPSEITNNMVKAR------VAEPDAANGF--LLDGFPRTVDQAKALEGILEGLGAKL-- 107

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                       D  +  D+  ++ ++R+  R    ++  +            + R ++ 
Sbjct: 108 ------------DGVLAFDVDDEVVVERMLARGRADDTEDVIR---------NRMR-VYR 145

Query: 179 D----IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +    +      +   VD+  + + V    L  +
Sbjct: 146 EETAPLLDYYAGQIVTVDAVGAVEEVNARALAAL 179


>gi|317129263|ref|YP_004095545.1| guanylate kinase [Bacillus cellulosilyticus DSM 2522]
 gi|315474211|gb|ADU30814.1| guanylate kinase [Bacillus cellulosilyticus DSM 2522]
          Length = 203

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 26/167 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I   G  G GK T    L++      Y V   TR P                    
Sbjct: 5   KGLLIVLSGPSGVGKGTVCGALRKHDTHIRYSVSATTRNPRTGEV---------DGVNYF 55

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F  + +         +H+    +       +   D +  +   Y  E  +S H  +  ++
Sbjct: 56  FKTKEQF--------EHMIENNQLLEWAKYV---DNYYGTPRTYVEETIASGHDVILEIE 104

Query: 122 ---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
               + V+E  P+   I  +P    LK ++NR   R +   D  + +
Sbjct: 105 VQGALQVKETFPEGVFIFLMPP--SLKELRNRIEGRGTETKDLIDSR 149


>gi|255973253|ref|ZP_05423839.1| predicted protein [Enterococcus faecalis T1]
 gi|255976247|ref|ZP_05426833.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|255964271|gb|EET96747.1| predicted protein [Enterococcus faecalis T1]
 gi|255969119|gb|EET99741.1| conserved hypothetical protein [Enterococcus faecalis T2]
          Length = 176

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + L + L+ +              + +  R  +L    DE G 
Sbjct: 16  KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 65  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 110 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 139


>gi|294939695|ref|XP_002782548.1| hypothetical protein Pmar_PMAR025641 [Perkinsus marinus ATCC
          50983]
 gi|239894255|gb|EER14343.1| hypothetical protein Pmar_PMAR025641 [Perkinsus marinus ATCC
          50983]
          Length = 114

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  G+GK+    +L   L         T+      +    R + L     +     
Sbjct: 24 ITIDGPAGSGKSVVAEMLADSLSG------FTK----LDSGALYRSIALFVNEGDIKGGI 73

Query: 67 EAIVFAAARLDHVENVI 83
          E++ + A R   +E VI
Sbjct: 74 ESLAYEAFRA-LLEQVI 89


>gi|217979345|ref|YP_002363492.1| signal recognition particle-docking protein FtsY [Methylocella
           silvestris BL2]
 gi|217504721|gb|ACK52130.1| signal recognition particle-docking protein FtsY [Methylocella
           silvestris BL2]
          Length = 483

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 34/144 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------VDEFG 63
           G+ G+GKTT I  L     ++   V +    G T  A A   + L              G
Sbjct: 280 GVNGSGKTTTIGKLAAQFSQEGRKVLLAA--GDTFRAAAIEQLRLWGDRLNCAVIAGNQG 337

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           ++A A+ F A R          A   G  IL+ D            R  ++   +  L++
Sbjct: 338 SDASALAFDAIRA---------ARESGADILIMD---------TAGRLQNRAELMAELEK 379

Query: 123 IS-----VQEVMPDCTII-LDLPV 140
           I      V+   P   ++ LD  V
Sbjct: 380 IVRVMKKVEPAAPHAVLLVLDATV 403


>gi|149190691|ref|ZP_01868958.1| Cell division protein ZipA [Vibrio shilonii AK1]
 gi|148835457|gb|EDL52427.1| Cell division protein ZipA [Vibrio shilonii AK1]
          Length = 161

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 31/188 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I F G  GAGKTT   L+            +  E             L +    +  
Sbjct: 5   GKLIFFCGKMGAGKTTQSKLIAAK-----QRAVLISED----------EWLAAHYPSQIQ 49

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  + I F+      +++ ++  L  G  ++ D    ++   Q    SS    +    E+
Sbjct: 50  SFEDYIKFSTLIKPFIKSHVQSLLTVGVDVVMD--FPANTVRQRLWFSSLCSEVQCAHEL 107

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                       L++P ++ L ++  R   +      +F+ +DV  H    Q F +   N
Sbjct: 108 Y----------YLNVPDEVCLVQIGKRRVEQPERA--HFDTEDV-FHH-VTQYFEEPTDN 153

Query: 184 QPDRCHIV 191
           +      V
Sbjct: 154 EGLNIVKV 161


>gi|148978744|ref|ZP_01815124.1| cell division protein FtsY [Vibrionales bacterium SWAT-3]
 gi|145962165|gb|EDK27449.1| cell division protein FtsY [Vibrionales bacterium SWAT-3]
          Length = 411

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 214 GVNGVGKTTTIGKLAKQFQNEGKKVMLAA--GDTFRAAAVEQLQVWGQRNDVPVIAQH-- 269

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 270 TGADSASVIYDAIEAAKARGVDVVIAD 296


>gi|123967010|ref|YP_001012091.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus str. MIT 9515]
 gi|123201376|gb|ABM72984.1| putative bifunctional enzyme; pantothenate synthetase/cytidylate
           kinase [Prochlorococcus marinus str. MIT 9515]
          Length = 509

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
           M     I+ +G  G+GK+T   L+ + L+
Sbjct: 278 MKRNPIIAIDGPAGSGKSTITKLIAKKLK 306


>gi|251779324|ref|ZP_04822244.1| lipid A export ATP-binding/permease protein MsbA [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083639|gb|EES49529.1| lipid A export ATP-binding/permease protein MsbA [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 593

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           + SG  ++  G  GAGKTT I+LL RF + +   + +          E  R +L
Sbjct: 374 IKSGQMVAIVGPTGAGKTTLINLLMRFYEIQGGSIKIDGVDSRDMKREDLRAIL 427


>gi|166154666|ref|YP_001654784.1| cytidylate kinase [Chlamydia trachomatis 434/Bu]
 gi|166155541|ref|YP_001653796.1| cytidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335936|ref|ZP_07224180.1| cytidylate kinase [Chlamydia trachomatis L2tet1]
 gi|226761647|sp|B0B825|KCY_CHLT2 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|238687483|sp|B0BC90|KCY_CHLTB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|165930654|emb|CAP04151.1| cytidylate kinase [Chlamydia trachomatis 434/Bu]
 gi|165931529|emb|CAP07105.1| cytidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 216

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|328880493|emb|CCA53732.1| hypothetical protein SVEN_0445 [Streptomyces venezuelae ATCC
          10712]
          Length = 627

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          L ++  G +GAGK++ +  L   L  +   V 
Sbjct: 8  LLVAVSGPDGAGKSSLVGRLSALLAERGLTVV 39


>gi|325180322|emb|CCA14725.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 1232

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 44/123 (35%), Gaps = 4/123 (3%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G   AGKTT +  L  F + + + V++   P  +   +    +++     +      
Sbjct: 864 VLTGGPCAGKTTSLERLSTFFRDRGFRVYIV--PEASTLLQTGGALVVDLKEKDILNFQW 921

Query: 68  AIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            ++    +  D   ++         ++LCDR      AY       +  +   L  ++++
Sbjct: 922 QLLKLQMSLEDSFYSLAMDT-KSPCVILCDRGAMDGSAYMSTDQWEELKYEHDLDTVTLR 980

Query: 127 EVM 129
           +  
Sbjct: 981 DTR 983


>gi|254569556|ref|XP_002491888.1| Plasma membrane ATP binding cassette (ABC) transporter [Pichia
           pastoris GS115]
 gi|238031685|emb|CAY69608.1| Plasma membrane ATP binding cassette (ABC) transporter [Pichia
           pastoris GS115]
 gi|328351612|emb|CCA38011.1| Pleiotropic ABC efflux transporter of multiple drugs [Pichia
           pastoris CBS 7435]
          Length = 1484

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 24/141 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-------LLSCGVDEFG 63
           G+ GAGKTT + +L   +    Y V      G        R          +        
Sbjct: 863 GVSGAGKTTLLDVLADRIS---YGVIT----GDFFVNGQVRDASFQRSTGYVQQQDLHLD 915

Query: 64  AEA--EAIVFAAARLDHVENVIRPALMEGKIL--LCDRFLDSSYAYQGERDSSQHLFLDS 119
                EA++F+A         I P   +   +  + D      YA        + L ++ 
Sbjct: 916 TSTVREALLFSACLRQ--SESI-PYKEKADYVEEIIDLLEMRLYADAVVGVPGEGLNVEQ 972

Query: 120 LQEISVQ---EVMPDCTIILD 137
            + +++       PD  + LD
Sbjct: 973 RKRLTIGVELVAKPDLLLFLD 993


>gi|261855873|ref|YP_003263156.1| adenylate kinase [Halothiobacillus neapolitanus c2]
 gi|261836342|gb|ACX96109.1| adenylate kinase [Halothiobacillus neapolitanus c2]
          Length = 217

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 52/226 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T    L        Y V            +  R  + +       A+A
Sbjct: 3   IVLLGAPGSGKGTQAKKLVDH-----YGVVQIS------TGDLLRAAVSAGTALGLTAKA 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCD--R-FLDSSYAYQGERDSSQHLFLDSLQEI 123
                A      V + I  A+++ ++   D  R ++   +     +  +  + L  + + 
Sbjct: 52  -----AMDAGQLVSDDIVLAMIKERLDQADTKRGYILDGFPRNIAQAQALDVLLGEVNQP 106

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFER 164
                     I+LD+P +  ++R+  R + ++   +                   +  +R
Sbjct: 107 LQAA------IVLDVPFEDLMQRLTGRQTCKQCGAVFNIYTHPSAQPGICDVCGGELIQR 160

Query: 165 KDV--MIHEKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVAT 202
            D      EKR ++F +          + ++   +D       +  
Sbjct: 161 SDDNEATVEKRLKVFEEQTAPLIAFYEKQNKLARIDGTQPIDDITE 206


>gi|15030252|gb|AAH11392.1| PAPSS1 protein [Homo sapiens]
 gi|123980280|gb|ABM81969.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [synthetic
           construct]
 gi|123995093|gb|ABM85148.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [synthetic
           construct]
          Length = 603

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 38  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 84  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 132 FFEVFVDAPLHVCEQR 147


>gi|74002095|ref|XP_535683.2| PREDICTED: similar to Bifunctional 3-phosphoadenosine
           5-phosphosulfate synthethase 1 (PAPS synthethase 1)
           (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 1
           [Canis familiaris]
          Length = 608

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 43  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 88

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 89  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 136

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 137 FFEVFVDAPLHVCEQR 152


>gi|127512354|ref|YP_001093551.1| adenylyl-sulfate kinase [Shewanella loihica PV-4]
 gi|126637649|gb|ABO23292.1| adenylylsulfate kinase [Shewanella loihica PV-4]
          Length = 209

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + R L  +  + +                 +L       G   + 
Sbjct: 41  FTGLSGSGKSTVANAVDRLLHDRGCNTY-----------------VLDGDNVRHGLNGDL 83

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +  +  G ++        S A+    ++ + L  D L   + 
Sbjct: 84  GFSDEDRVENIRRIGEVAKLFVDAGTLV--------STAFISPFNADRKLVRDLLA--AH 133

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           Q +     + +D P+++  +R
Sbjct: 134 QFIE----VFIDTPLEVCEQR 150


>gi|94311848|ref|YP_585058.1| deoxynucleoside kinase [Cupriavidus metallidurans CH34]
 gi|93355700|gb|ABF09789.1| deoxynucleoside kinase [Cupriavidus metallidurans CH34]
          Length = 213

 Score = 39.2 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 29/196 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G+GK      L R LQ           P G                      A
Sbjct: 8   IVIEGPVGSGKAALAQRLARHLQAA-------ELPDGARNNPFLERFYREPQRYAL---A 57

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQHLFLDSL 120
             +     R+  ++     A++ G+ ++       DR + +S   + +  +        L
Sbjct: 58  MQLACLNQRVTQLQQ-WHSAMLAGQRMIGNFLFARDR-VYASLTLEADELALYDALAARL 115

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q  + +    D  I+L     +  +R+  R    ES         D    ++    + ++
Sbjct: 116 QAPAQRV---DLVIMLQATPSLLRERIARRGLPGESGI-------DEQYLQRLTDAYGEL 165

Query: 181 ARNQPD-RCHIVDSAH 195
                +    IVD+AH
Sbjct: 166 FHRYDEAPVLIVDTAH 181


>gi|330954981|gb|EGH55241.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae Cit 7]
          Length = 442

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 302 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 357

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 358 TGADSASVIFDAVQAAKARGIDVLIAD 384


>gi|305663029|ref|YP_003859317.1| ABC transporter related [Ignisphaera aggregans DSM 17230]
 gi|304377598|gb|ADM27437.1| ABC transporter related [Ignisphaera aggregans DSM 17230]
          Length = 258

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 70/251 (27%)

Query: 7   ISFE----------GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--- 53
           I+ E          G  GAGKTT + ++ R L+     V++    G        R +   
Sbjct: 21  ITLEVGEGENLYIIGPNGAGKTTLLKVIARVLEPLKGVVYI---DGKDYRLYNPRELAKM 77

Query: 54  --LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
              +   VD             AR  H +++      E  ++  DR      A     D 
Sbjct: 78  ISYVDPHVDRSIPSTVYHFLLTARYPHQKSLQIVE-SEDDVVAIDR-----VAKAFGIDH 131

Query: 112 SQHLFLDSLQEISVQEV--------MPDCTI------ILDLPVDIGLKRVQNRYSLRESA 157
                LD L    +Q V         P+  +       LD+           RY +    
Sbjct: 132 LLDRRLDQLSSGELQRVVIARAFVQEPEIVLLDEPSAFLDI-----------RYRMEVLE 180

Query: 158 CLDYFERKD-----VMIHEKRRQIFLDIARNQPDRCHI-----VDSAHSFQSVA-----T 202
            +  F         V IH+      L +A    DR  +     + +  + + V       
Sbjct: 181 YVKRFISSSNRVAIVAIHD------LYLASLYADRIAVLSNGRIVAVGTPEEVFSSRVIE 234

Query: 203 NILNIVWELVQ 213
           ++  +  EL+Q
Sbjct: 235 DVYGVKIELIQ 245


>gi|229829152|ref|ZP_04455221.1| hypothetical protein GCWU000342_01237 [Shuttleworthia satelles DSM
           14600]
 gi|229792315|gb|EEP28429.1| hypothetical protein GCWU000342_01237 [Shuttleworthia satelles DSM
           14600]
          Length = 222

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 73/242 (30%), Gaps = 59/242 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFG 63
           I+ +G  GAGK+T    + + L    Y    T            R +   LL  GVD   
Sbjct: 5   IAIDGPAGAGKSTIARRVAKEL---GYLYVDT--------GAMYRAIALFLLRSGVDLSD 53

Query: 64  AEAEAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLF 116
            +A +       +        +  L+ G+ +       S               S     
Sbjct: 54  EDAVSKQVKDCHVSLRYREGQQEVLLNGEDV-------SGLIRTEEVGNAASASSIYPKV 106

Query: 117 LDSL----------QEISVQE------VMPD--CTIILDLPVDI-GLKRV-----QNRYS 152
            D L          + + +        V+P     I L        L+R      Q +  
Sbjct: 107 RDQLTCLQRELAAQENLVMDGRDIGTTVLPHASLKIYLTASAKTRALRRAKEYEAQGKAF 166

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
             E    D  ER D  +H K       +A+ +      +DS+  S   V   IL +  E 
Sbjct: 167 DLEQIQRDIEERDDRDMHRKIS----PLAQAKDA--VRIDSSQMSIDQVVERILQLAEEE 220

Query: 212 VQ 213
           ++
Sbjct: 221 IK 222


>gi|229079725|ref|ZP_04212258.1| uridine kinase [Bacillus cereus Rock4-2]
 gi|229190638|ref|ZP_04317634.1| uridine kinase [Bacillus cereus ATCC 10876]
 gi|228592771|gb|EEK50594.1| uridine kinase [Bacillus cereus ATCC 10876]
 gi|228703565|gb|EEL56018.1| uridine kinase [Bacillus cereus Rock4-2]
          Length = 189

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188
           D TI +D P+DI + R   R    +   +D     D+  +    R+ +L+     +P+  
Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216
            I+D + S   +   I + V EL ++ V
Sbjct: 161 IILDGSLSVSEI---INHAVEELGRREV 185


>gi|229070030|ref|ZP_04203305.1| uridine kinase [Bacillus cereus F65185]
 gi|228713092|gb|EEL64992.1| uridine kinase [Bacillus cereus F65185]
          Length = 186

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188
           D TI +D P+DI + R   R    +   +D     D+  +    R+ +L+     +P+  
Sbjct: 101 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 157

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216
            I+D + S   +   I + V EL ++ V
Sbjct: 158 IILDGSLSVSEI---INHAVEELGRREV 182


>gi|225630124|ref|YP_002726915.1| guanylate kinase [Wolbachia sp. wRi]
 gi|225592105|gb|ACN95124.1| guanylate kinase [Wolbachia sp. wRi]
          Length = 201

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 61/209 (29%), Gaps = 34/209 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+ +      GAGKTT  + L          V   TR+P            +      E 
Sbjct: 7   GVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHEL 66

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + + +A    +      N I   L  G  +L       S  +QG     + +    
Sbjct: 67  CKAGQMLEYAKVFENFYGIPRNFIEQNLSNGISVLL------SIDWQGAFHLFKLMRKKV 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +              IL  P    ++ ++ R   R S      ER       +  +   +
Sbjct: 121 VS-----------VFIL--PP--SMEELRLRLQKRNSDDASEIER-------RLAEAQKE 158

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           I++       I++           I +I+
Sbjct: 159 ISKRDKYDYVIIN--DDIDKSVEEISSIL 185


>gi|218200847|gb|EEC83274.1| hypothetical protein OsI_28627 [Oryza sativa Indica Group]
          Length = 681

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 75/243 (30%), Gaps = 55/243 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEF 62
             G   +GK T   ++     +       T +        GT   + A+  + +  +   
Sbjct: 95  ISGAPASGKGTQCRMIVE---KYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPD 151

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               + +         V  + +P + E    L D +  S                   Q 
Sbjct: 152 QVVTDMV---------VSRLSQPDVRERGW-LLDGYPRSY---------------AQAQS 186

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVM 168
           +   ++ PD  I+L++P DI + R   R    E+  +                   +   
Sbjct: 187 LESMKIRPDIFIVLEVPDDILIDRCVGRRLDPETGKIYHIKNFPPENDEVSARLVTRSDD 246

Query: 169 IHEKRR---QIFLDIARN----QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
             EK +   + +   +        D  + +D     + V   I +++ ++ +   S + +
Sbjct: 247 TFEKVKSRLETYKQNSEAVIPTYSDLLNQIDGNRQVEVVFNEIDSLLQKICENASSNMLA 306

Query: 222 KKD 224
           K +
Sbjct: 307 KTN 309


>gi|169823949|ref|YP_001691560.1| sugar ABC transportor ATP-binding protein [Finegoldia magna ATCC
          29328]
 gi|167830754|dbj|BAG07670.1| sugar ABC transportor ATP-binding protein [Finegoldia magna ATCC
          29328]
          Length = 352

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          MN G FI F G  G GKTT + ++ 
Sbjct: 29 MNDGEFIVFVGPSGCGKTTTLRMIA 53


>gi|152980422|ref|YP_001354829.1| signal recognition particle receptor [Janthinobacterium sp.
           Marseille]
 gi|151280499|gb|ABR88909.1| signal recognition particle receptor [Janthinobacterium sp.
           Marseille]
          Length = 419

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + I+  G+ GAGKTT I  L + LQ  N  V +
Sbjct: 222 MMIT--GVNGAGKTTTIGKLAKHLQAHNQSVLL 252


>gi|153807906|ref|ZP_01960574.1| hypothetical protein BACCAC_02192 [Bacteroides caccae ATCC 43185]
 gi|149129515|gb|EDM20729.1| hypothetical protein BACCAC_02192 [Bacteroides caccae ATCC 43185]
          Length = 217

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 16  LIIGIAGGTGSGKTTVVRKIVESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 74

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
              +++       HV       L EGK +    +   +   Q E    +   +  ++ I 
Sbjct: 75  FEWSLL-----SKHVM-----MLKEGKSIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 124

Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 ++ +M D  I +D   D  L RV  R  +      +
Sbjct: 125 ALCDKKLRNIM-DLKIFVDADPDERLIRVIQRDVIERGRTAE 165


>gi|154253198|ref|YP_001414022.1| adenylate kinase [Parvibaculum lavamentivorans DS-1]
 gi|171769643|sp|A7HWT2|KAD_PARL1 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|154157148|gb|ABS64365.1| adenylate kinase [Parvibaculum lavamentivorans DS-1]
          Length = 205

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 72/233 (30%), Gaps = 49/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  GAGK T    L+            T         +  R  +      E G 
Sbjct: 2   KLILL-GPPGAGKGTQAKRLEE---AHGLVQLST--------GDMLRAAVAQGS--EVGK 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR---------FLDSSYAYQGERDSSQHL 115
            AE I+   AR + V + +         ++ DR         ++   +     R+ +Q  
Sbjct: 48  VAEGIM---ARGELVPDDVVVG------IIADRIEQPDAVNGYILDGF----PRNVAQAE 94

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            LD +  ++ +    D  + L +   I LKR++ R +            + +    K   
Sbjct: 95  ALDKM--LAGKGTTLDAVVELGVDDSILLKRIETRAAETAGGPRADDNAEALAKRLKV-- 150

Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            + +             +   VD   S   V   I  ++   + KR     S+
Sbjct: 151 -YHEQTAPLIAYYKAKGKLRTVDGMKSMDEVTGQIETVLG--ISKRKGSWLSR 200


>gi|114573056|ref|XP_001142469.1| PREDICTED: similar to guanylate kinase 1 [Pan troglodytes]
          Length = 475

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 67  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 113

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G D +    E +     R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 114 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 164

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYF 162
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E + +   
Sbjct: 165 VLDVDLQGVRNIKATDLQP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRL 215


>gi|81428300|ref|YP_395300.1| guanylate kinase [Lactobacillus sakei subsp. sakei 23K]
 gi|119371233|sp|Q38XU0|KGUA_LACSS RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|78609942|emb|CAI54989.1| Guanylate kinase [Lactobacillus sakei subsp. sakei 23K]
          Length = 203

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 57/175 (32%), Gaps = 27/175 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           N G+ I   G  G GK T    +L+   +  +Y V   TR+P      E           
Sbjct: 3   NRGMLIVLSGPSGVGKGTVRQAMLEDEFRDFHYSVSMTTRKP---RPGEQ------DGVD 53

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             F ++ E     A             L   + +  D +  +   Y  +   S    L  
Sbjct: 54  YYFVSKEEFEQEIAND---------GMLEYAQYV--DNYYGTPMKYVNQTLESGRDVLLE 102

Query: 120 LQ---EISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMI 169
           ++    + V+E  PD   I   P D      R+Q R +  ++      ++    I
Sbjct: 103 IEVQGAMQVREKCPDGVFIFLTPPDLLELRNRIQKRGTDDQATIDKRMQKAADEI 157


>gi|84393534|ref|ZP_00992288.1| Signal recognition particle GTPase [Vibrio splendidus 12B01]
 gi|84375813|gb|EAP92706.1| Signal recognition particle GTPase [Vibrio splendidus 12B01]
          Length = 417

 Score = 39.2 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 220 GVNGVGKTTTIGKLAKQFQSEGKKVMLAA--GDTFRAAAVEQLQVWGQRNNVPVIAQH-- 275

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 276 TGADSASVIYDAIEAAKARGVDVVIAD 302


>gi|330444192|ref|YP_004377178.1| Cytidylate kinase [Chlamydophila pecorum E58]
 gi|328807302|gb|AEB41475.1| Cytidylate kinase [Chlamydophila pecorum E58]
          Length = 216

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L   L 
Sbjct: 1  MIITIDGPSGTGKSTIAKALADRLN 25


>gi|258513962|ref|YP_003190184.1| hypothetical protein Dtox_0642 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777667|gb|ACV61561.1| hypothetical protein Dtox_0642 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 264

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 9/97 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG+ G GK+T    L   L  +        E       +     L  C        
Sbjct: 4   LIFIEGVSGVGKSTTAKKLCEALNVRGDSADCYLEGNVDNPVD-----LFCCACLSKPEF 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102
              +       +H+   ++ ++ E   +L  R+ D++
Sbjct: 59  TALLQNYPNEAEHL---LKNSIQESDYVLV-RYADTN 91


>gi|251773397|gb|EES53946.1| Shikimate kinase [Leptospirillum ferrodiazotrophum]
          Length = 180

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 71/210 (33%), Gaps = 43/210 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F+ F G  G+GKTT    L R L    YD     E     A E    +    G +    
Sbjct: 3   RFVVFVGPRGSGKTTLGHALGRVLDAPVYDTDRMVE---DLAGEPLSRLWEREGEEA--- 56

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                 F A     +E ++   L  G  ++            G     +     +L+ + 
Sbjct: 57  ------FRAVESRALETLLT--LSPG--VVST----------GGGIVLRQENRQNLRRLG 96

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---IA 181
                    I L +P +  L R+ +    R         R+ V + E+ RQ+ L+   + 
Sbjct: 97  Y-------VIYLHVPEEQLLSRLASGSERRPRL------RQGVSLEEEVRQVILERDPLY 143

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           R   DR   V    S  +    IL+++  L
Sbjct: 144 REVADRVLSV-GGASIATTLEEILSVLRPL 172


>gi|237802880|ref|YP_002888074.1| cytidylate kinase [Chlamydia trachomatis B/Jali20/OT]
 gi|237804802|ref|YP_002888956.1| cytidylate kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255311264|ref|ZP_05353834.1| cytidylate kinase [Chlamydia trachomatis 6276]
 gi|255317566|ref|ZP_05358812.1| cytidylate kinase [Chlamydia trachomatis 6276s]
 gi|231273102|emb|CAX10015.1| cytidylate kinase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274114|emb|CAX10908.1| cytidylate kinase [Chlamydia trachomatis B/Jali20/OT]
          Length = 216

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|187469049|gb|AAI66793.1| Papss1 protein [Rattus norvegicus]
          Length = 624

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|149243095|pdb|2PEY|A Chain A, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain
           Of Human Paps-Synthetase 1
 gi|149243096|pdb|2PEY|B Chain B, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain
           Of Human Paps-Synthetase 1
 gi|149243097|pdb|2PEZ|A Chain A, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain
           Of Human Paps-Synthetase 1 In Complex With Cyclic Paps
           And Dadp
 gi|149243098|pdb|2PEZ|B Chain B, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain
           Of Human Paps-Synthetase 1 In Complex With Cyclic Paps
           And Dadp
          Length = 179

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 12  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 58  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 105

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 106 FFEVFVDAPLHVCEQR 121


>gi|118587696|ref|ZP_01545106.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Stappia aggregata IAM 12614]
 gi|118439318|gb|EAV45949.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Stappia aggregata IAM 12614]
          Length = 644

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 38/202 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  S++++ L       +                  L       G   + 
Sbjct: 467 FTGLSGSGKSTIASIVEKKLHIDGRHTYT-----------------LDGDNVRHGLNKDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
               A R++++  V   A      L  D  L +  ++     S + +  D L++    E 
Sbjct: 510 GFTDADRVENIRRVGEVAK-----LFADAGLITLVSFISPFRSERQMARDLLED---GEF 561

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
                + +D P++      + R      A  D  E K+    +   +     A   P+  
Sbjct: 562 ---IEVFVDTPIEE----CRKRDPKGLYAKADRGEIKNFTGIDSPYE-----APENPE-L 608

Query: 189 HIVDSAHSFQSVATNILNIVWE 210
           HI +     + VA  I+  + E
Sbjct: 609 HIRNVGRDPEEVAEEIIEYLRE 630


>gi|91212399|ref|YP_542385.1| ATP-binding protein YghS [Escherichia coli UTI89]
 gi|117625291|ref|YP_854463.1| putative ATP-binding protein YghS [Escherichia coli APEC O1]
 gi|218560060|ref|YP_002392973.1| hypothetical protein ECS88_3367 [Escherichia coli S88]
 gi|237706268|ref|ZP_04536749.1| ATP-binding protein YghS [Escherichia sp. 3_2_53FAA]
 gi|91073973|gb|ABE08854.1| hypothetical ATP-binding protein YghS [Escherichia coli UTI89]
 gi|115514415|gb|ABJ02490.1| putative ATP-binding protein YghS [Escherichia coli APEC O1]
 gi|218366829|emb|CAR04599.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli S88]
 gi|226899308|gb|EEH85567.1| ATP-binding protein YghS [Escherichia sp. 3_2_53FAA]
 gi|281180026|dbj|BAI56356.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294491461|gb|ADE90217.1| putative lipoprotein [Escherichia coli IHE3034]
 gi|312947546|gb|ADR28373.1| hypothetical protein NRG857_14815 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|323951492|gb|EGB47367.1| yghS protein [Escherichia coli H252]
 gi|323957864|gb|EGB53578.1| yghS protein [Escherichia coli H263]
          Length = 237

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++     +G +L+ DR+         
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 135

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 136 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 186

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 187 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 230

Query: 207 IVWELV 212
            +   +
Sbjct: 231 AIHAAL 236


>gi|33303835|gb|AAQ02431.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [synthetic
           construct]
          Length = 604

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 38  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 84  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 132 FFEVFVDAPLHVCEQR 147


>gi|30021051|ref|NP_832682.1| hypothetical protein BC2934 [Bacillus cereus ATCC 14579]
 gi|229128279|ref|ZP_04257260.1| hypothetical protein bcere0015_27240 [Bacillus cereus BDRD-Cer4]
 gi|29896604|gb|AAP09883.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
 gi|228655138|gb|EEL10995.1| hypothetical protein bcere0015_27240 [Bacillus cereus BDRD-Cer4]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|332110851|gb|EGJ11028.1| sulfate adenylyltransferase, large subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 634

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L                         LL       G   + 
Sbjct: 466 FTGLSGAGKSTIANLVEKRLHALGRH-----------------SYLLDGDNVRHGLNKDL 508

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R+++V     V R  +  G I+L 
Sbjct: 509 GFTEADRVENVRRVGEVARLMVDAGLIVLT 538


>gi|301165831|emb|CBW25404.1| guanylate kinase [Bacteriovorax marinus SJ]
          Length = 188

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 31/181 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ G  I      G GK+T I  +K         V + TR          A + +     
Sbjct: 1   MSIGKIIVICAPSGTGKSTLIKKVKAEFTELIESVSYTTRPIREGEQNGVAYNFIDEKTF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQ 113
            E   + E + +A    ++    ++ +   L +GK LL D   +  DS  AY G++    
Sbjct: 61  LEMKDDNEFLEWAKVHSNYYGTSKSFVESELEKGKNLLFDLDVQGADSFKAYFGDKAQ-- 118

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDI--GLKRVQNRYSLRESACLDYFERKDVMIHE 171
                               II   P  I    KR++ R +          E     +  
Sbjct: 119 --------------------IIFIAPPSIVELEKRLRGRGTDSTGVIQIRLENAKREVLR 158

Query: 172 K 172
           K
Sbjct: 159 K 159


>gi|212696090|ref|ZP_03304218.1| hypothetical protein ANHYDRO_00626 [Anaerococcus hydrogenalis DSM
          7454]
 gi|212676719|gb|EEB36326.1| hypothetical protein ANHYDRO_00626 [Anaerococcus hydrogenalis DSM
          7454]
          Length = 216

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          MN+   I+ +G  G+GK+T  +LL + L+
Sbjct: 1  MNN-FIIALDGPSGSGKSTIANLLAKKLK 28


>gi|188036033|pdb|2PT5|A Chain A, Crystal Structure Of Shikimate Kinase (Aq_2177) From
           Aquifex Aeolicus Vf5
 gi|188036034|pdb|2PT5|B Chain B, Crystal Structure Of Shikimate Kinase (Aq_2177) From
           Aquifex Aeolicus Vf5
 gi|188036035|pdb|2PT5|C Chain C, Crystal Structure Of Shikimate Kinase (Aq_2177) From
           Aquifex Aeolicus Vf5
 gi|188036036|pdb|2PT5|D Chain D, Crystal Structure Of Shikimate Kinase (Aq_2177) From
           Aquifex Aeolicus Vf5
          Length = 168

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 49/194 (25%)

Query: 15  AGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71
           +GK+T  SLL R L    YDV      RE    P        +     + +  + E    
Sbjct: 11  SGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQ-------IFEKKGEAYFRKLEF--- 60

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131
                     V++    +  +++                       ++L     +     
Sbjct: 61  ---------EVLKDLSEKENVVIST-------------GGGLGANEEALNFXKSRGT--- 95

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T+ +D+P ++ L+R +     +E   L     +   + E+RR+I+   ++        V
Sbjct: 96  -TVFIDIPFEVFLERCK---DSKERPLLKRPLDEIKNLFEERRKIY---SKAD----IKV 144

Query: 192 DSAHSFQSVATNIL 205
                 + V   IL
Sbjct: 145 KGEKPPEEVVKEIL 158


>gi|84490317|ref|YP_448549.1| signal recognition particle protein Srp54 [Methanosphaera
           stadtmanae DSM 3091]
 gi|121731822|sp|Q2NE47|SRP54_METST RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|84373636|gb|ABC57906.1| signal recognition particle, 54 kDa protein [Methanosphaera
           stadtmanae DSM 3091]
          Length = 444

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT  + L + L++K +   +       PAA E  R +      +         
Sbjct: 106 GLQGSGKTTTTAKLVKHLKKKGHTSAIVCTDTWRPAAYEQLRQL-----TEPLDVPVFGD 160

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 +D  +  +     +  ++L D            R   +   LD + E+  Q V 
Sbjct: 161 PENKDAIDLAKKGLEKCGSKYDVILVD---------TAGRHKEEKDLLDEMAEL-SQIVQ 210

Query: 130 PDCTII 135
           PD  I+
Sbjct: 211 PDEVIL 216


>gi|42782045|ref|NP_979292.1| hypothetical protein BCE_2989 [Bacillus cereus ATCC 10987]
 gi|42737969|gb|AAS41900.1| hypothetical protein BCE_2989 [Bacillus cereus ATCC 10987]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILNQNKIEVELFLE 39


>gi|58616284|ref|YP_195413.1| transposition helper protein [Azoarcus sp. EbN1]
 gi|56315745|emb|CAI10389.1| transposition helper protein [Aromatoleum aromaticum EbN1]
          Length = 255

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKT  I+ L   L  + Y V  TR        +AAR  L            + ++
Sbjct: 100 GPPGVGKTHLIASLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELAKLDRFDLLI 159

Query: 71  ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
              F+  R D  E  +   L      + +R+   S A
Sbjct: 160 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 190


>gi|74096077|ref|NP_001027723.1| ATP sulfurylase/APS kinase [Ciona intestinalis]
 gi|9229920|dbj|BAB00629.1| ATP sulfurylase/APS kinase [Ciona intestinalis]
          Length = 618

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 11/58 (18%)

Query: 1  MNSGLF----ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          M  G F    + F G+ GAGK+T    L+ +L  K         P  +   +  RH L
Sbjct: 38 MGKGAFRGCTVWFTGLSGAGKSTLSMKLEEYLCSKGI-------PAYSLDGDNIRHGL 88


>gi|16329922|ref|NP_440650.1| adenylate kinase [Synechocystis sp. PCC 6803]
 gi|1652408|dbj|BAA17330.1| adenylate kinase [Synechocystis sp. PCC 6803]
          Length = 187

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 55/224 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55
           M  GL   F G  G+GK T    L   L         T         +  R  +     L
Sbjct: 3   MAKGLI--FLGAPGSGKGTQAVGLAETL---GIPHIST--------GDMLRQAIADGTEL 49

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDS 111
                 +  + E +         +  +I   L     +   +L D F          R+ 
Sbjct: 50  GNQAKGYMDKGELVP-----DQLILGLIEERLGHKDAKAGWIL-DGF---------PRNV 94

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYF----ERK 165
           +Q +FLD L  +          I L +P ++ ++R   + R    E+   +      E+ 
Sbjct: 95  NQAIFLDEL--LVNIGHRTHWVINLKVPDEVIVERLLARGRADDNETTIRNRLLVYTEQT 152

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
             ++       + +  +        +D     +++ATN+  +V 
Sbjct: 153 APLM-----AYYQEQGKLYS-----LDGNQPVEAIATNLEKLVK 186


>gi|330957085|gb|EGH57345.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 506

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 307 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 362

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 363 TGADSASVIFDAVQAAKARGIDVLIAD 389


>gi|324326911|gb|ADY22171.1| hypothetical protein YBT020_14705 [Bacillus thuringiensis serovar
          finitimus YBT-020]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILNQNKIEVELFLE 39


>gi|326804561|ref|YP_004327432.1| putative uncharacterised protein [Salmonella phage Vi01]
 gi|301795211|emb|CBW37929.1| putative uncharacterised protein [Salmonella phage Vi01]
          Length = 220

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 37/173 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK+T  S L       ++   N  + +T  P              S GVD     
Sbjct: 37  GSNGSGKSTVPSYLAENDPQAYVVTYNGKIMLTVCPSYNIICIGKYDKSKSKGVDSLKD- 95

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            E ++FA +  D  E +    L EG I        S+                 L     
Sbjct: 96  TEQMLFALSIADQPEYLKYDVLFEGII-------PSTL----------------LSSWIP 132

Query: 126 QEVMP--DCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +   P  +  ++  D P++  + RV++R     +   D+ E   V   E+   
Sbjct: 133 RLTRPPRELVVLFMDTPLETCVSRVKSR-----NGGADFNESLVVEKWERVHD 180


>gi|295098606|emb|CBK87696.1| dephospho-CoA kinase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 206

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 38/82 (46%), Gaps = 12/82 (14%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D T+++D+  +  ++R   R ++           + ++  +  R+  L IA +      +
Sbjct: 125 DRTLVIDVSRETQIQRTMARDNVSREHA------EQILAAQATREARLAIADD------V 172

Query: 191 VDSAHSFQSVATNILNIVWELV 212
           +D+  +  ++A+++  +  + +
Sbjct: 173 IDNNGAPDAIASDVARLHAQYL 194


>gi|156542428|ref|XP_001601528.1| PREDICTED: similar to guanylate kinase [Nasonia vitripennis]
          Length = 233

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
          I F G  G+GK+T I LL      K  + V H TR P
Sbjct: 31 IVFCGPSGSGKSTLIKLLFNEFPDKFGFSVSHTTRNP 67


>gi|329963983|ref|ZP_08301237.1| conserved domain protein [Bacteroides fluxus YIT 12057]
 gi|328526406|gb|EGF53420.1| conserved domain protein [Bacteroides fluxus YIT 12057]
          Length = 441

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR 30
             G  I+  G +G+GK+T I+ +  +L +
Sbjct: 225 KPGYVIAVLGTDGSGKSTIINAITPWLNQ 253


>gi|325846626|ref|ZP_08169541.1| cytidylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481384|gb|EGC84425.1| cytidylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 216

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          MN+   I+ +G  G+GK+T  +LL + L+
Sbjct: 1  MNN-FIIALDGPSGSGKSTIANLLAKKLK 28


>gi|325129220|gb|EGC52060.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis OX99.30304]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|317491951|ref|ZP_07950385.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920072|gb|EFV41397.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 273

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 31/222 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAAR-HVLLSCG 58
           + SG  ++  G  GAGK+T + LL  FL   + +     R        + AR   ++   
Sbjct: 36  LQSGEMVAIIGPNGAGKSTLMRLLTGFLPPSEGHCELQQRPLDEWSPRQLARTRAVMRQH 95

Query: 59  VDEFGAEAEAIVFAAARL---------DHVENVIRPALME-GKILLCDRFLDSSYAYQGE 108
            D   A +   V A  R          +H    +   + + G  +L DR      A  G 
Sbjct: 96  SDLAFAFSVREVVAMGRSPYPNQGRGGEHNLRAVEHVMAQTGCDILADR---DYRALSG- 151

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
            +  +      L ++   E  P   + LD      L     + +LR    L   E   V 
Sbjct: 152 GEQQRVQLARVLAQLWQPEPQP-RWLFLD-EPTSALDLYHQQQTLRLLKSLTRSEPLGVC 209

Query: 169 --IHEKRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATN 203
             +H+      L++A    DR  ++      +  + Q V ++
Sbjct: 210 CILHD------LNLAALYADRILLLHQGQLVAQGTPQEVLSD 245


>gi|295132214|ref|YP_003582890.1| guanylate kinase [Zunongwangia profunda SM-A87]
 gi|294980229|gb|ADF50694.1| guanylate kinase [Zunongwangia profunda SM-A87]
          Length = 190

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 77/221 (34%), Gaps = 38/221 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G  I F    G+GKTT +  L  +  L+        +R P          + L    
Sbjct: 1   MKEGKLIVFSAPSGSGKTTIVRHLLKQDDLKLDFSISATSRAPRPNEIDGKDYYFLSLED 60

Query: 59  VDEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             +     E +    V+       ++  +     +GK ++ D                  
Sbjct: 61  FKKKIKNDEFLEWEEVYRDNFYGTLKAEVERIWEKGKHVIFD------------------ 102

Query: 115 LFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             +D +  + ++++ P+ T+ +   P    ++ ++ R   R++  +D           + 
Sbjct: 103 --IDVVGGLDIKKIYPEKTLAVFVKPP--SIEELKIRLKKRKTESMDKIN-------MRV 151

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +  +++A   P    I++  +  +       ++V + ++K
Sbjct: 152 AKASIELATA-PQFDFIIE-NNDLEVALKEAHDLVADFIKK 190


>gi|270291146|ref|ZP_06197369.1| deoxyguanosine kinase [Pediococcus acidilactici 7_4]
 gi|304385428|ref|ZP_07367773.1| deoxynucleoside kinase [Pediococcus acidilactici DSM 20284]
 gi|270280542|gb|EFA26377.1| deoxyguanosine kinase [Pediococcus acidilactici 7_4]
 gi|304328635|gb|EFL95856.1| deoxynucleoside kinase [Pediococcus acidilactici DSM 20284]
          Length = 210

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 40/229 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKT+   LL +               G     E+     +     +     
Sbjct: 2   IALSGPIGAGKTSLTELLTQH-------------WGSDAYYESVDDNKILPLFYKDPKRY 48

Query: 67  EAIV---FAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLDS--- 119
             ++   F   RLD ++        +G   + DR +   S  +    D  +    +    
Sbjct: 49  AFLLQIYFLNKRLDSIKQA-----NDGFRSVMDRSIYEDSLLFHLNADLGRATETEVKIY 103

Query: 120 ---LQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              L  +  +         PD  I +D+  D  LKR++ R    E    D         +
Sbjct: 104 DSLLSNMMQELPRLSYKKNPDLLIHIDISFDTMLKRIKKRGRSYEQIENDP---SLYDYY 160

Query: 171 EKRRQIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVS 217
           ++  + ++    N      I +D    +  V   +    V +LV++++S
Sbjct: 161 KELNRRYVSWFENYDQSPKIRIDGDK-YDFVEEPSARQQVIQLVEEKIS 208


>gi|256958569|ref|ZP_05562740.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|257078123|ref|ZP_05572484.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|257086428|ref|ZP_05580789.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|307268815|ref|ZP_07550183.1| hypothetical protein HMPREF9498_00948 [Enterococcus faecalis
           TX4248]
 gi|307286917|ref|ZP_07566995.1| hypothetical protein HMPREF9505_00440 [Enterococcus faecalis
           TX0109]
 gi|256949065|gb|EEU65697.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256986153|gb|EEU73455.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256994458|gb|EEU81760.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|306501975|gb|EFM71263.1| hypothetical protein HMPREF9505_00440 [Enterococcus faecalis
           TX0109]
 gi|306514943|gb|EFM83490.1| hypothetical protein HMPREF9498_00948 [Enterococcus faecalis
           TX4248]
 gi|315028029|gb|EFT39961.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
 gi|315031636|gb|EFT43568.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
 gi|315034921|gb|EFT46853.1| conserved hypothetical protein [Enterococcus faecalis TX0027]
 gi|315144587|gb|EFT88603.1| conserved hypothetical protein [Enterococcus faecalis TX2141]
 gi|315160983|gb|EFU05000.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
 gi|315165568|gb|EFU09585.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
 gi|327534706|gb|AEA93540.1| hypothetical protein OG1RF_10853 [Enterococcus faecalis OG1RF]
 gi|329578202|gb|EGG59607.1| hypothetical protein HMPREF9520_00025 [Enterococcus faecalis
           TX1467]
          Length = 177

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + L + L+ +              + +  R  +L    DE G 
Sbjct: 17  KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 66  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140


>gi|206971431|ref|ZP_03232381.1| hypothetical protein BCAH1134_2559 [Bacillus cereus AH1134]
 gi|206733416|gb|EDZ50588.1| hypothetical protein BCAH1134_2559 [Bacillus cereus AH1134]
          Length = 189

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188
           D TI +D P+DI + R   R    +   +D     D+  +    R+ +L+     +P+  
Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160

Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216
            I+D + S   +   I + V EL ++ V
Sbjct: 161 IILDGSLSVSEI---INHAVEELGRREV 185


>gi|168021975|ref|XP_001763516.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685309|gb|EDQ71705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 190

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 39/212 (18%)

Query: 11  GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK+T  + +        L     D+    +  GT      + ++    +      
Sbjct: 3   GGPGSGKSTQCAKIVENFGFEHLSAG--DLLRAEQNSGTEIGNMIKDLIKEGKLVP---- 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                      +    +I  A+ E      D+FL   +     R+       D +     
Sbjct: 57  ----------SEVTVKLILKAISEST---NDKFLIDGF----PRNEENREVWDRVT---- 95

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
             + P+  + +    +   +RV +R   R+   ++    +  + +E      L + +   
Sbjct: 96  -GLKPEFILFITGSEEEMERRVLSRTGGRDDDNVETIRNRFKVFNEST----LPVIKRYE 150

Query: 186 DR--CHIVDSAHSFQSVATNILNIVWELVQKR 215
                H V+  HS   V  +I  +   +VQ R
Sbjct: 151 TNTTVHKVNGLHSADEVFASIRPLFELIVQVR 182


>gi|148658619|ref|YP_001278824.1| shikimate kinase [Roseiflexus sp. RS-1]
 gi|148570729|gb|ABQ92874.1| shikimate kinase [Roseiflexus sp. RS-1]
          Length = 176

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 64/216 (29%), Gaps = 62/216 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G+ G+GK+T   LL   L              G    +          V++    +
Sbjct: 8   IALVGLSGSGKSTVARLLAGRL--------------GWHMCDT------DAMVEQMTGRS 47

Query: 67  EAIVFA----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              +FA    AA  +     +  AL    +++            G     +      L++
Sbjct: 48  IPALFAEEGEAAFRECESAALAAALARTPVVIAT----------GGGIVVRESNRVLLKD 97

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFE---RKDVMIHEKRRQ 175
            +         + LD P  + + R++     R     D      E      +  + +   
Sbjct: 98  QA-------LVVWLDAPTAVLIARLRTHEEERPLLAGDDPAVRLEALRAARLPFYRQVAH 150

Query: 176 IFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWE 210
                         I+D++  S   VA  I+ +V  
Sbjct: 151 -------------LILDTSQMSPLQVAERIIAVVTR 173


>gi|150388982|ref|YP_001319031.1| phosphonate ABC transporter, ATPase subunit [Alkaliphilus
          metalliredigens QYMF]
 gi|149948844|gb|ABR47372.1| phosphonate ABC transporter, ATPase subunit [Alkaliphilus
          metalliredigens QYMF]
          Length = 247

 Score = 38.9 bits (90), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            G F+S  G  GAGK+T I  + R ++     +    +       +  R +
Sbjct: 30 KKGEFVSIIGPSGAGKSTLIRCINRLVEPSGGKIIFKEKDIVKARGKELRMI 81


>gi|325139507|gb|EGC62047.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis CU385]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|325135260|gb|EGC57883.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis M13399]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|318605916|emb|CBY27414.1| putative periplasmic protein kinase ArgK and related GTPases of G3E
           family [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 331

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK+T +  L   L  + + V  +  +P     GG+   +  R + LS     F  
Sbjct: 61  GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 120

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94
              +             +I      G  I++
Sbjct: 121 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 151


>gi|313205640|ref|YP_004044817.1| deoxynucleoside kinase [Riemerella anatipestifer DSM 15868]
 gi|312444956|gb|ADQ81311.1| deoxynucleoside kinase [Riemerella anatipestifer DSM 15868]
 gi|315022629|gb|EFT35654.1| Deoxyadenosine kinase [Riemerella anatipestifer RA-YM]
 gi|325334932|gb|ADZ11206.1| Deoxynucleoside kinase [Riemerella anatipestifer RA-GD]
          Length = 204

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 33/190 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   +L +                     +   +  L     +    +
Sbjct: 3   IAVTGNIGAGKTTLTKMLAKH------------YGWEAQFEDVDDNPYLDDFYHDMSKWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
            A+   F  +R   V+ +       GK ++ DR  + D+    +   +       D    
Sbjct: 51  FALQIYFLGSRFRQVKEI----RESGKNIIQDRTIYEDAHIFAENLNEMQLLSDRDYKNY 106

Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            S+ E+M      PD  I L   V   + ++  R    E+          +    K    
Sbjct: 107 TSLFELMKTFVSAPDLLIYLRASVPKLVGQIAKRGRDYEAEI-------SIDYLSKLNNK 159

Query: 177 FLDIARNQPD 186
           +    +N  +
Sbjct: 160 YESWIQNYKE 169


>gi|261391594|emb|CAX49032.1| cell division protein FtsY [Neisseria meningitidis 8013]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|260438043|ref|ZP_05791859.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM
          2876]
 gi|292809522|gb|EFF68727.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM
          2876]
          Length = 251

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            G FIS  G  G GK+T +S++   ++  + +V V     G P  +  R++
Sbjct: 31 KKGQFISIVGPSGCGKSTLLSIICGLIEPTSGEVIV----NGRPVKDEMRNI 78


>gi|255348825|ref|ZP_05380832.1| cytidylate kinase [Chlamydia trachomatis 70]
 gi|255503365|ref|ZP_05381755.1| cytidylate kinase [Chlamydia trachomatis 70s]
 gi|255507043|ref|ZP_05382682.1| cytidylate kinase [Chlamydia trachomatis D(s)2923]
 gi|289525497|emb|CBJ14974.1| cytidylate kinase [Chlamydia trachomatis Sweden2]
 gi|296435053|gb|ADH17231.1| cytidylate kinase [Chlamydia trachomatis E/150]
 gi|296438773|gb|ADH20926.1| cytidylate kinase [Chlamydia trachomatis E/11023]
          Length = 216

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPSGTGKSTLAKALAQTLQ 25


>gi|225873340|ref|YP_002754799.1| putative uridine kinase [Acidobacterium capsulatum ATCC 51196]
 gi|225791224|gb|ACO31314.1| putative uridine kinase [Acidobacterium capsulatum ATCC 51196]
          Length = 204

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 59/213 (27%), Gaps = 36/213 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT    L R L  K     +                +     D   A    ++
Sbjct: 11  GCSGSGKTTLARELAREL--KGVPFLLDHYYRDLSHLSYEERCV--QNFDHPDAIETCLL 66

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV-- 128
                ++ +E      L     +   R+  ++      R +     ++    I V  +  
Sbjct: 67  -----IEQLEQ-----LAASHTIAQPRYDFAT----HTRRAGVEERMEPAACIVVDGIFA 112

Query: 129 --MP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR---QIF 177
              P      D ++ +D P  +  +R   R            E          R   + +
Sbjct: 113 LYYPGLRRLYDLSVYVDAPDAVCYERRLARDIRERGRTP---ESVAGHYAATVRPMAERY 169

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           +  +    D   IV    S       ++  + E
Sbjct: 170 VRPSSQYAD--LIVQGTESLDWSVERVMAEIGE 200


>gi|162456225|ref|YP_001618592.1| adenylate kinase [Sorangium cellulosum 'So ce 56']
 gi|189028367|sp|A9FGE0|KAD_SORC5 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|161166807|emb|CAN98112.1| Adenylate kinase [Sorangium cellulosum 'So ce 56']
          Length = 215

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 61/225 (27%), Gaps = 39/225 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + +   G  GAGK T   LL             T    G    EA R   L     +   
Sbjct: 1   MILVLVGPPGAGKGTQAKLLCARF---GIPQIST----GDMLREAKRSGTLEKRYLDIMD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEI 123
               +   A         + P    G   L D F          R   Q   LD  L   
Sbjct: 54  SGGLLPDEAVIGLIARRTVEPDCSNGF--LLDGF---------PRTVPQADALDELLASA 102

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----------DYFERKDVMIHEK 172
           +      D  I LD+   +  +R+ +R + + S  +              E +     E 
Sbjct: 103 NQGGKRIDAVIQLDVARPLLEERLIHRRTDKRSGQIYHLVYNPPPPGAELEHRADDRPEA 162

Query: 173 RR---QIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208
                  +  +         Q    H VD     + V   +L+ +
Sbjct: 163 VAKRLDAYEAMTAALLPFYEQKKLLHRVDGVGKPEEVTHRVLSAI 207


>gi|26541558|gb|AAN85545.1|AF484556_67 antibiotic resistance protein [Streptomyces atroolivaceus]
          Length = 539

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 9/73 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLSC 57
           + I+  G  GAGKTT + +L   L        R+    ++ +EPG     E+        
Sbjct: 373 MLIT--GPNGAGKTTLLRVLADELAPDTGSVTRRGRIGYLPQEPGPGRPGESLLAAFARG 430

Query: 58  GVDEFGAEAEAIV 70
              +     E ++
Sbjct: 431 RSGQTAEHRERLL 443


>gi|18425199|ref|NP_569050.1| adenylylsulfate kinase, putative [Arabidopsis thaliana]
 gi|28393175|gb|AAO42019.1| putative adenylylsulfate kinase [Arabidopsis thaliana]
 gi|28827764|gb|AAO50726.1| putative adenylylsulfate kinase [Arabidopsis thaliana]
 gi|332010972|gb|AED98355.1| adenylylsulfate kinase [Arabidopsis thaliana]
          Length = 310

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 40/151 (26%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK++    L R L  +                      +L      
Sbjct: 107 QKGCVIWITGLSGSGKSSLACALSRALHNRGK-----------------LSYILDGDNVR 149

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G  ++    A  R +++     V +     G I +    L S Y               
Sbjct: 150 HGLNSDLSFEADDRAENIRRVGEVAKLFADSGIICIA--SLISPY--------------- 192

Query: 119 SLQEISVQEVMP--DCT-IILDLPVDIGLKR 146
            ++  + + ++P  D   + +D+P+ +   R
Sbjct: 193 RIERAACRALLPQGDFIEVFMDVPLHVCEAR 223


>gi|50120042|ref|YP_049209.1| shikimate kinase II [Pectobacterium atrosepticum SCRI1043]
 gi|81645895|sp|Q6D872|AROL_ERWCT RecName: Full=Shikimate kinase 2; Short=SK 2
 gi|49610568|emb|CAG74013.1| shikimate kinase [Pectobacterium atrosepticum SCRI1043]
          Length = 173

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 64/210 (30%), Gaps = 42/210 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  G GKTT    L + L    YD   T              V+   G  
Sbjct: 1   MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F                       AL +   +  +R + ++            +  ++ 
Sbjct: 56  GFRQRESL-----------------ALQQ---VASNRCIVAT--------GGGMVLAEAN 87

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179
           +     +      I L    ++  +R++      +   L      +++      R+    
Sbjct: 88  RRFMHDKG---IVIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            A +     H++D++ +  ++  ++L  + 
Sbjct: 145 GAAH-----HVIDASQTPDAIVVSVLKALR 169


>gi|302539762|ref|ZP_07292104.1| polyphosphate kinase 2 [Streptomyces hygroscopicus ATCC 53653]
 gi|302457380|gb|EFL20473.1| polyphosphate kinase 2 [Streptomyces himastatinicus ATCC 53653]
          Length = 304

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 34/123 (27%), Gaps = 31/123 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 78  IVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPTERERGQW----------------- 120

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +    ++H+          G+I+L DR   S Y   G          D  +    Q
Sbjct: 121 ----YFQRYVEHLPT-------AGEIVLFDR---SWYNRAGVERVMGFCSEDEYRRFMRQ 166

Query: 127 EVM 129
             M
Sbjct: 167 APM 169


>gi|301105439|ref|XP_002901803.1| guanylate kinase [Phytophthora infestans T30-4]
 gi|262099141|gb|EEY57193.1| guanylate kinase [Phytophthora infestans T30-4]
          Length = 270

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 55/221 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  G GK T I+LL         + V H TR P        A H       D+   
Sbjct: 82  IVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHF---TAKDKVLK 138

Query: 65  EAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           E EA +F    L+H E            ++    +GKI + D                  
Sbjct: 139 EIEAGLF----LEHAEVHGNVYGTSKRAVQDVQEKGKICILD------------------ 176

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + +  +Q++    + P   + +  P    ++ ++ R   R +   D           + +
Sbjct: 177 IDIQGVQQVKKSGI-PAKYLFI-APP--SMEELEKRLRGRATETEDKI-------QLRVK 225

Query: 175 QIFLDIA-RNQPDRCHIVDS---AHSFQSVATNILNIVWEL 211
               ++A   QP      D+             ++  + + 
Sbjct: 226 NAAGELAYGQQPGVF---DAILVNQVVDDSFRELVETLKQW 263


>gi|288941370|ref|YP_003443610.1| cytidylate kinase [Allochromatium vinosum DSM 180]
 gi|288896742|gb|ADC62578.1| cytidylate kinase [Allochromatium vinosum DSM 180]
          Length = 225

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 72/232 (31%), Gaps = 37/232 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           + +G  G GK T +  L   L    +    +          A R  L     +     A 
Sbjct: 6   TIDGPSGTGKGTLMQRLAERL---GWHALDSGALYRVLGLAAGRQGLDLDDPEALTPLAA 62

Query: 68  AIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQEI 123
           A+   F A R+      +  A+         R  ++  A          +   LD  +  
Sbjct: 63  ALPVEFQAGRVLLSGEDVSDAI---------RTEEAGMAASRVAAHPGVRAALLDWQRRF 113

Query: 124 S-VQEVMPD-------------CTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVM 168
           +    ++ D               I LD   +I   R + RY   +   +D    +    
Sbjct: 114 ARAPGLVADGRDMGTVVFPQARLKIFLDASPEI---RAERRYKQLKEKGVDANLPQLVAD 170

Query: 169 IHEK-RRQIFLDIARNQP-DRCHIVDSAH-SFQSVATNILNIVWELVQKRVS 217
           I E+  R     +A   P +   +VDS   S   V   +L  V  +  + ++
Sbjct: 171 IRERDARDRSRPVAPLCPAEDAVLVDSTQMSIAEVLDRVLEEVRRVFPEAIA 222


>gi|229145531|ref|ZP_04273915.1| hypothetical protein bcere0012_26840 [Bacillus cereus BDRD-ST24]
 gi|296503473|ref|YP_003665173.1| hypothetical protein BMB171_C2641 [Bacillus thuringiensis BMB171]
 gi|228637984|gb|EEK94430.1| hypothetical protein bcere0012_26840 [Bacillus cereus BDRD-ST24]
 gi|296324525|gb|ADH07453.1| hypothetical protein BMB171_C2641 [Bacillus thuringiensis BMB171]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|154502792|ref|ZP_02039852.1| hypothetical protein RUMGNA_00606 [Ruminococcus gnavus ATCC 29149]
 gi|153796675|gb|EDN79095.1| hypothetical protein RUMGNA_00606 [Ruminococcus gnavus ATCC 29149]
          Length = 543

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
           M   + I FEG + AGK   I  L + L  + ++V   +E  
Sbjct: 69  MGLPIMIVFEGFDAAGKGMQIGKLIQSLDPRGFEVFTVKEET 110


>gi|116582905|gb|ABK00075.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 140

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 106

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 107 TAGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|89096302|ref|ZP_01169195.1| probable permease protein of ABC transporter system [Bacillus sp.
           NRRL B-14911]
 gi|89089156|gb|EAR68264.1| probable permease protein of ABC transporter system [Bacillus sp.
           NRRL B-14911]
          Length = 609

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            SG  ++  G  GAGKTT I+LL RF +    ++ +   P    + E  R +
Sbjct: 394 KSGQKVAIVGPTGAGKTTIINLLMRFYEVSGGEILIDGVPTKELSREKLRSL 445


>gi|58698484|ref|ZP_00373390.1| guanylate kinase [Wolbachia endosymbiont of Drosophila ananassae]
 gi|58534999|gb|EAL59092.1| guanylate kinase [Wolbachia endosymbiont of Drosophila ananassae]
          Length = 205

 Score = 38.9 bits (90), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 61/209 (29%), Gaps = 34/209 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+ +      GAGKTT  + L          V   TR+P            +      E 
Sbjct: 11  GVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHEL 70

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + + +A    +      N I   L  G  +L       S  +QG     + +    
Sbjct: 71  CKAGQMLEYAKVFENFYGIPRNFIEQNLSNGISVLL------SIDWQGAFHLFKLMRKKV 124

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +              IL  P    ++ ++ R   R S      ER       +  +   +
Sbjct: 125 VS-----------VFIL--PP--SMEELRLRLQKRNSDDASEIER-------RLAEAQKE 162

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           I++       I++           I +I+
Sbjct: 163 ISKRDKYDYVIIN--DDIDKSVEEISSIL 189


>gi|219118618|ref|XP_002180078.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408335|gb|EEC48269.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 179

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 74/199 (37%), Gaps = 29/199 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK     LL + L+++ + VH++   G    +E A+   L   V +     E +V
Sbjct: 5   GGPGSGK----GLLSKRLEKECHVVHLSS--GELLRSEVAQDTALGRQVRDIMDRGE-LV 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            +A  +  ++  +R     GK +L D F  S               L++  ++      P
Sbjct: 58  SSAIMVALMKKRMRDH--PGKRVLLDGFPRS---------------LENAHDLVTLCGRP 100

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE-KRRQIFLD----IARNQP 185
           +  + L+    I L+R+  R +          +     +   +    F +      R Q 
Sbjct: 101 ELALHLECDDTILLERILQRGADSAPEERRADDNFQTALQRLRTYHAFHNSTIHWLREQH 160

Query: 186 DRCHIVDSAHSFQSVATNI 204
                +D + + +SV   +
Sbjct: 161 VPVVNLDCSGTAESVWQQL 179


>gi|220936146|ref|YP_002515045.1| signal recognition particle-docking protein FtsY [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219997456|gb|ACL74058.1| signal recognition particle-docking protein FtsY [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 329

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L + LQ +   V +    G T  A A   + +    +      +   
Sbjct: 131 GINGAGKTTTIGKLAKRLQNEGRSVMLAA--GDTFRAAAVEQLQVWGERNRIPVITQGK- 187

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 188 -GADSASVIYDAVQAAKARGVDVLIAD 213


>gi|124376186|gb|AAI32822.1| CMPK2 protein [Homo sapiens]
 gi|219519051|gb|AAI44203.1| CMPK2 protein [Homo sapiens]
          Length = 366

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 6/45 (13%)

Query: 1   MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
           +  G F  ++ EG++  GKTT    +   L+     V +   P  
Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC 287


>gi|330970953|gb|EGH71019.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 499

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 300 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 355

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 356 TGADSASVIFDAVQAAKARGIDVLIAD 382


>gi|329118182|ref|ZP_08246892.1| cell division protein FtsY [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465603|gb|EGF11878.1| cell division protein FtsY [Neisseria bacilliformis ATCC BAA-1200]
          Length = 470

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L ++ Q++   V +
Sbjct: 276 GINGAGKTTSIGKLAKYFQQQGKTVIL 302


>gi|332160700|ref|YP_004297277.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325664930|gb|ADZ41574.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330862479|emb|CBX72636.1| shikimate kinase 2 [Yersinia enterocolitica W22703]
          Length = 174

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 46/213 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M   +F+   G  GAGKTT    L + L+ +  D     ++   +  AE    ++   G 
Sbjct: 1   MTQTIFMV--GARGAGKTTIGKALAQALEYRFIDTDLFMQQTLQSSVAE----IVAREGW 54

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D F       +        V          G  +L     + ++  Q             
Sbjct: 55  DGFRLRESMAL------QTVTAPKTVVATGGGAVLS--HDNRTFMRQHG----------- 95

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIF 177
                         I L    ++  +R+       +   L       + + +   R  ++
Sbjct: 96  ------------VVIYLRASANVLAERLAEDPEDAQRPSLTGKPIVEEMLDVLASREPLY 143

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            ++A       H++D+    + V   IL+I+ +
Sbjct: 144 QEVAH------HVLDATQPPEEVVEQILHILAD 170


>gi|254294008|ref|YP_003060031.1| ABC transporter [Hirschia baltica ATCC 49814]
 gi|254042539|gb|ACT59334.1| ABC transporter related [Hirschia baltica ATCC 49814]
          Length = 744

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           + +G FI+  G  G+GK+T + +L          V+    P  T    + R  +
Sbjct: 510 IQAGEFIALTGPSGSGKSTLLRVLMGLYPSTGGQVYFDGLPLSTWGPSSIRAQI 563


>gi|222149181|ref|YP_002550138.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium
          vitis S4]
 gi|221736166|gb|ACM37129.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium
          vitis S4]
          Length = 352

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
          N G FISF G  G GKTT + ++ 
Sbjct: 27 NKGEFISFLGPSGCGKTTVLRMVA 50


>gi|3334298|sp|O30391|FTSY_NEIMC RecName: Full=Cell division protein ftsY homolog
 gi|2580590|gb|AAB97510.1| putative transcriptional regulator [Neisseria meningitidis]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|322698616|gb|EFY90385.1| guanylate kinase [Metarhizium acridum CQMa 102]
          Length = 194

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 35/174 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVD 60
           I   G  G GK T    L   L  ++ D       H TR P    A     H +     +
Sbjct: 11  IVISGPSGVGKGT----LYNRLFAQHPDTFCLSVSHTTRSPRPGEANGVDYHYVSMGDFE 66

Query: 61  EFGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +  A+    E   F   R    +  I     +GK++L D                +   +
Sbjct: 67  DLIAKDGFVEHAQFGGNRYGTSKMTIEEQTKKGKVVLLD---------------IEMEGV 111

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
             +++ S+        I +  P   +I   R++ R +  E++  +   + ++ +
Sbjct: 112 KQIKQSSIAARY----IFI-APPSLEILEARLRGRGTENEASIQNRLNQANIEL 160


>gi|302187229|ref|ZP_07263902.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. syringae 642]
          Length = 502

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 303 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 358

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 359 TGADSASVIFDAVQAAKARGIDVLIAD 385


>gi|282851457|ref|ZP_06260822.1| putative excinuclease ABC subunit A [Lactobacillus gasseri 224-1]
 gi|282557425|gb|EFB63022.1| putative excinuclease ABC subunit A [Lactobacillus gasseri 224-1]
          Length = 503

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T ++L LKR L +K
Sbjct: 179 GKFIVVTGVSGSGKSTLVNLILKRALAQK 207


>gi|269115117|ref|YP_003302880.1| Excinuclease ABC subunit A [Mycoplasma hominis]
 gi|268322742|emb|CAX37477.1| Excinuclease ABC subunit A [Mycoplasma hominis ATCC 23114]
          Length = 942

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHIS-----LLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G FI+  G+ G+GK+T I+      L ++L  + YD+    +  G    +    +
Sbjct: 636 GKFIAITGVSGSGKSTLINDELVGSLNKYLLDQYYDIQRDNKLIGQTNIDKLIQI 690


>gi|257482993|ref|ZP_05637034.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|331011768|gb|EGH91824.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 496

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 297 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 352

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 353 TGADSASVIFDAVQAAKARGIDVLIAD 379


>gi|261364318|ref|ZP_05977201.1| signal recognition particle-docking protein FtsY [Neisseria mucosa
           ATCC 25996]
 gi|288567574|gb|EFC89134.1| signal recognition particle-docking protein FtsY [Neisseria mucosa
           ATCC 25996]
          Length = 483

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 290 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 344

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +++
Sbjct: 345 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLKK 395

Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159
            MPD      ++LD   +IG   V    +  E+  L
Sbjct: 396 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 429


>gi|196250272|ref|ZP_03148965.1| Adenylyl-sulfate kinase [Geobacillus sp. G11MC16]
 gi|196210161|gb|EDY04927.1| Adenylyl-sulfate kinase [Geobacillus sp. G11MC16]
          Length = 203

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + R L                      ++ +L       G   + 
Sbjct: 30  FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              AA R +++     V +  +  G+ +L      S +A   E  +     ++  + I  
Sbjct: 73  GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126

Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
                   I ++ P++   KR          R  +RE   +D
Sbjct: 127 --------IYVNCPLEECEKRDPKGLYKKARRGEIREFTGID 160


>gi|119482584|ref|XP_001261320.1| uridylate kinase Ura6 [Neosartorya fischeri NRRL 181]
 gi|119409475|gb|EAW19423.1| uridylate kinase Ura6 [Neosartorya fischeri NRRL 181]
          Length = 235

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 65/213 (30%), Gaps = 36/213 (16%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T  + L R      L   +       RE  G+   +  R  +    +     
Sbjct: 40  GGPGSGKGTQSANLVRDYGFIHLSAGDLLRAEQVRE--GSQYGDLIRTYIKEGKIVPMEI 97

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               +  A A              + K     RFL       G                 
Sbjct: 98  TVALLSNAMAEALAAGAGATADGGKKKA----RFLID-----GFPRKLDQAV------FF 142

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
              V P + T+ LD P ++  KR+  R    E++  D    + +    KR ++F++    
Sbjct: 143 EDTVCPSEMTLFLDCPEEVMEKRLLKRG---ETSGRDDDNAESI---RKRFRVFVETSMP 196

Query: 180 --IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
              A  +  +   V +  +   V   I   + +
Sbjct: 197 VVRAFEEQHKVLSVSATGTVDEVYARIREGLEK 229


>gi|71903063|ref|YP_279866.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS6180]
 gi|71802158|gb|AAX71511.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS6180]
          Length = 226

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52
              + I   G   +GK+T + ++    ++  Y       V    +  G    EA R    
Sbjct: 27  KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 82

Query: 53  --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +L + G  +    +E +      +         +I+  L   +             + 
Sbjct: 83  NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 130

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            +  +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         + 
Sbjct: 131 AQSQAIFFMDIPILMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 188

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                      L I   +P    ++D++    ++   + + +  L   R
Sbjct: 189 -----------LPIEEKKPYASLVIDNSGDIAALIKQVQSALLSLANPR 226


>gi|6647539|sp|P73302|KAD1_SYNY3 RecName: Full=Adenylate kinase 1; Short=AK 1; AltName: Full=ATP-AMP
           transphosphorylase 1
          Length = 185

 Score = 38.9 bits (90), Expect = 0.50,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 55/224 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55
           M  GL   F G  G+GK T    L   L         T         +  R  +     L
Sbjct: 1   MAKGLI--FLGAPGSGKGTQAVGLAETL---GIPHIST--------GDMLRQAIADGTEL 47

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDS 111
                 +  + E +         +  +I   L     +   +L D F          R+ 
Sbjct: 48  GNQAKGYMDKGELVP-----DQLILGLIEERLGHKDAKAGWIL-DGF---------PRNV 92

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYF----ERK 165
           +Q +FLD L  +          I L +P ++ ++R   + R    E+   +      E+ 
Sbjct: 93  NQAIFLDEL--LVNIGHRTHWVINLKVPDEVIVERLLARGRADDNETTIRNRLLVYTEQT 150

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
             ++       + +  +        +D     +++ATN+  +V 
Sbjct: 151 APLM-----AYYQEQGKLYS-----LDGNQPVEAIATNLEKLVK 184


>gi|330985908|gb|EGH84011.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 502

 Score = 38.9 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 303 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 358

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 359 TGADSASVIFDAVQAAKARGIDVLIAD 385


>gi|289648495|ref|ZP_06479838.1| cell division transporter substrate-binding protein FtsY
           [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 494

 Score = 38.9 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 295 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 350

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 351 TGADSASVIFDAVQAAKARGIDVLIAD 377


>gi|289624656|ref|ZP_06457610.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|298485261|ref|ZP_07003354.1| signal recognition particle docking protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298160249|gb|EFI01277.1| signal recognition particle docking protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|330871132|gb|EGH05841.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 496

 Score = 38.9 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 297 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 352

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 353 TGADSASVIFDAVQAAKARGIDVLIAD 379


>gi|226365994|ref|YP_002783777.1| signal recognition particle protein [Rhodococcus opacus B4]
 gi|226244484|dbj|BAH54832.1| signal recognition particle protein [Rhodococcus opacus B4]
          Length = 535

 Score = 38.9 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 22/157 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60
           G++G+GKTT    L ++L+ + +   +       P A     ++             G  
Sbjct: 114 GLQGSGKTTLAGKLAKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTS 173

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             G + E  + AA  ++     +  A  +   +++ D            R       +  
Sbjct: 174 IGGGDNELGITAADPVEVARAGVEEARNKQFDVVIVD---------TAGRLGIDADLMAQ 224

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
              I    V PD TI + L   IG   V    + RE 
Sbjct: 225 AAGI-RDAVNPDETIFV-LDAMIGQDAVSTAEAFREG 259


>gi|269968645|ref|ZP_06182642.1| signal recognition particle-docking protein FtsY [Vibrio
           alginolyticus 40B]
 gi|269826732|gb|EEZ81069.1| signal recognition particle-docking protein FtsY [Vibrio
           alginolyticus 40B]
          Length = 408

 Score = 38.9 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 211 GVNGVGKTTTIGKLAKQFQTQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 266

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 267 TGADSASVIYDAIEAAKARGVDVVIAD 293


>gi|288931995|ref|YP_003436055.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Ferroglobus placidus DSM 10642]
 gi|288894243|gb|ADC65780.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Ferroglobus placidus DSM 10642]
          Length = 431

 Score = 38.9 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 18/153 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT  + + ++ + K     V       PAA E  + +    G+  FG + E  
Sbjct: 99  GLQGSGKTTTAAKIAKYFKDKGMKAAVIAGDTHRPAAYEQLKQLAEQAGLGFFGKKEE-- 156

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 +  V+  +  AL +  +++ D            R + +   ++ ++ I+ +   
Sbjct: 157 ---KDAVKIVKEGLE-ALKDYDVIVID---------TAGRHALEEELIEEMKRIA-EVSK 202

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           PD   ++ L   IG    +   +  E+  +D  
Sbjct: 203 PDYKFLV-LDASIGQLASKQAEAFNEAVGIDAI 234


>gi|119897057|ref|YP_932270.1| signal recognition particle-docing protein FtsY [Azoarcus sp. BH72]
 gi|119669470|emb|CAL93383.1| probable signal recognition particle-docing protein FtsY [Azoarcus
           sp. BH72]
          Length = 377

 Score = 38.9 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +    I   G+ G+GKTT I  L ++ Q +   V +    G T  A A   ++     + 
Sbjct: 161 HKPYIIMIAGVNGSGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLMTWGERNN 218

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96
               A+           + + I  A   G  I+L D
Sbjct: 219 VTVIAQD---GGDAAAVIFDAINAARARGIDIVLAD 251


>gi|220909488|ref|YP_002484799.1| Guanylate kinase [Cyanothece sp. PCC 7425]
 gi|219866099|gb|ACL46438.1| Guanylate kinase [Cyanothece sp. PCC 7425]
          Length = 233

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 22/171 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G  +   G  G GK T +  L +      + +   TR P          + +     ++
Sbjct: 21  RGQLVVITGPSGVGKGTLLRSLLQHHPELFFSISATTRAPRPGEVQGQHYYFVSHEKFEQ 80

Query: 62  FGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             AE E +    FA          +   + +GK ++                  +     
Sbjct: 81  MLAEGELLESAQFAGNSYGTPRQPVENQIRQGKQVIL---------------EIELEGAR 125

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            ++    Q +      IL   +++  +R++ R    E+A      R    I
Sbjct: 126 QVRHSYPQALQ---VFILPPSLEVLEERIRGRGQDSEAAIAKRLARAQEEI 173


>gi|161869063|ref|YP_001598229.1| signal recognition particle protein [Neisseria meningitidis 053442]
 gi|161594616|gb|ABX72276.1| signal recognition particle protein [Neisseria meningitidis 053442]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|41946992|gb|AAH66055.1| Papss1 protein [Mus musculus]
 gi|74139519|dbj|BAE40897.1| unnamed protein product [Mus musculus]
 gi|74141810|dbj|BAE40977.1| unnamed protein product [Mus musculus]
 gi|148680250|gb|EDL12197.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1, isoform CRA_a
           [Mus musculus]
          Length = 603

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 38  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 84  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 132 FFEVFVDAPLHVCEQR 147


>gi|27573157|gb|AAO19978.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|36939131|gb|AAQ86944.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|36939151|gb|AAQ86948.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|37623910|gb|AAQ95587.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|71736424|ref|YP_276881.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71556977|gb|AAZ36188.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 500

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 301 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 356

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 357 TGADSASVIFDAVQAAKARGIDVLIAD 383


>gi|87308020|ref|ZP_01090162.1| cell division protein FtsY [Blastopirellula marina DSM 3645]
 gi|87289102|gb|EAQ80994.1| cell division protein FtsY [Blastopirellula marina DSM 3645]
          Length = 328

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ G+GKTT I+ L  +L+ +   V +
Sbjct: 131 GVNGSGKTTSIAKLASYLKSQGKSVVL 157


>gi|158318908|ref|YP_001511416.1| hypothetical protein Franean1_7191 [Frankia sp. EAN1pec]
 gi|158114313|gb|ABW16510.1| conserved hypothetical protein [Frankia sp. EAN1pec]
          Length = 334

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          I+F G  G+GKTT  +LL R L  + + V 
Sbjct: 3  IAFVGKGGSGKTTLSALLCRHLAARGHPVL 32


>gi|94985946|ref|YP_605310.1| adenylate kinases [Deinococcus geothermalis DSM 11300]
 gi|166980316|sp|Q1IX93|KAD_DEIGD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|94556227|gb|ABF46141.1| adenylate kinase [Deinococcus geothermalis DSM 11300]
          Length = 197

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 67/230 (29%), Gaps = 58/230 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +    + F G  GAGK T    L R            +        +  R          
Sbjct: 4   SKNKVVIFLGPPGAGKGTQAERLARE-----------QNLAKISTGDILRD--------- 43

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKIL--------LCDRF--------LDSSYAY 105
                       AR   +   ++P L  G+++        + DR         +   +  
Sbjct: 44  ----------HVARGTALGQRVKPILDAGQLVPDDILIALIRDRLAGMEPVRVIFDGFPR 93

Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
              +  +  + L+ L              +L++P +  ++R+  R               
Sbjct: 94  TCAQAEALDMLLEELGAPVSAVP------LLEVPDETLIERIVERGRQAALRGEPVRSDD 147

Query: 166 DVMIHEKRRQIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVW 209
              +  +R+Q++ +    +      R H+  V+   +   V   IL +V 
Sbjct: 148 TEEVARRRQQVYREQTQPLIDYYAARGHLQHVNGVGTPDEVYNRILQVVR 197


>gi|332179475|gb|AEE15164.1| Fe(3+)-transporting ATPase [Thermodesulfobium narugense DSM
          14796]
          Length = 298

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          ++ G  ++  G +G+GKTT I ++   L+
Sbjct: 24 LDKGKILTILGPDGSGKTTLIKIIIGLLR 52


>gi|329764770|ref|ZP_08256364.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329138734|gb|EGG42976.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 441

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV 35
           GI+G+GKTT  + L +FL ++ Y V
Sbjct: 106 GIQGSGKTTVTAKLAKFLTKQGYSV 130


>gi|332161597|ref|YP_004298174.1| arginine/ornithine transport system ATPase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325665827|gb|ADZ42471.1| arginine/ornithine transport system ATPase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330861519|emb|CBX71730.1| laO/AO transport system kinase [Yersinia enterocolitica W22703]
          Length = 331

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK+T +  L   L  + + V  +  +P     GG+   +  R + LS     F  
Sbjct: 61  GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 120

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94
              +             +I      G  I++
Sbjct: 121 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 151


>gi|222529174|ref|YP_002573056.1| ABC transporter-like protein [Caldicellulosiruptor bescii DSM
          6725]
 gi|222456021|gb|ACM60283.1| ABC transporter related [Caldicellulosiruptor bescii DSM 6725]
          Length = 279

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 12/70 (17%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI   G  G GK+T ++++   L++          P         R  +LS G D 
Sbjct: 30 QKGKFICILGPSGCGKSTLLNIIAG-LEK----------PSEGKVFLNGRE-VLSPGPDR 77

Query: 62 FGAEAEAIVF 71
               E+ +F
Sbjct: 78 VVMFQESALF 87


>gi|254473567|ref|ZP_05086963.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211957279|gb|EEA92483.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 522

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 34/198 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEAEAI 69
           G+ G GKTT    L   L R    VH+          +  R  +L     D+   +    
Sbjct: 351 GLSGTGKTTLAQGLAPKLGRMPGAVHL--------RTDVIRKEMLEIGEADKASKDTYTP 402

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
            F+A     +       L  G  ++ D                +    DS++ ++ +   
Sbjct: 403 EFSAKVYAELLRRAEMVLAAGHSVIID------------GVYGKPTERDSVERLAKKTNA 450

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
               I L+  V+  + RV  R+     A              + +Q + D+         
Sbjct: 451 EFIGIWLEADVETLINRVDARHGDASDAD---------AAVVRLQQTY-DLGEIH---WA 497

Query: 190 IVDSAHSFQSVATNILNI 207
           ++DS+ S + V     N+
Sbjct: 498 MLDSSKSKEDVLEQACNV 515


>gi|162149013|ref|YP_001603474.1| putative tetraacyldisaccharide 4'-kinase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545237|ref|YP_002277466.1| tetraacyldisaccharide 4'-kinase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|226740811|sp|A9H0Y0|LPXK_GLUDA RecName: Full=Tetraacyldisaccharide 4'-kinase; AltName: Full=Lipid
           A 4'-kinase
 gi|161787590|emb|CAP57186.1| putative tetraacyldisaccharide 4'-kinase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532914|gb|ACI52851.1| tetraacyldisaccharide 4'-kinase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 327

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           GAGKTT    L   L  +   VH +TR  GG                +      EA++ A
Sbjct: 55  GAGKTTVALDLAARLVARGRHVHILTRGYGGRARGPLLVDPARHSAAEVGD---EALLLA 111


>gi|147898604|ref|NP_001088321.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa
           [Xenopus laevis]
 gi|54038695|gb|AAH84366.1| Ndufa10a protein [Xenopus laevis]
          Length = 351

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 78/244 (31%), Gaps = 35/244 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEA-------ARHV 53
             I+ +G   +GK      L   L  + +    + ++ +  G      +           
Sbjct: 54  KIITVDGNLASGKGQIAKKLADRLGMRYFPEADEHYLDKTTGDGSILPSKFSGNCSLDKF 113

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERD 110
                  +  +        + RL    + +   L  G+  + +R   S + +     +  
Sbjct: 114 YDDPKCPDGNSYRLQSWMYSVRLMQYSDALEHLLSTGQGAVLERSPFSDFVFLEAMYKNG 173

Query: 111 SSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERK 165
             +   +D   EI      + + P   I +D+P     K++  R    E    L Y +  
Sbjct: 174 YIRKQCIDHYNEIKGNSIDEFLPPHLVIYVDVPAAEVHKKILERGHTSEKKVALPYLQSI 233

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIV----DSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           +       ++ FL       +   I+    + A   + V  +I     E ++   SP + 
Sbjct: 234 ENTY----KESFLPQISENSE---ILKYTGNEAQDVEKVVEDI-----EYLKFDKSPWTE 281

Query: 222 KKDI 225
           + D+
Sbjct: 282 QNDV 285


>gi|66047975|ref|YP_237816.1| cell division transporter substrate-binding protein FtsY
           [Pseudomonas syringae pv. syringae B728a]
 gi|63258682|gb|AAY39778.1| Cell division transporter substrate-binding protein FtsY
           [Pseudomonas syringae pv. syringae B728a]
          Length = 505

 Score = 38.9 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 306 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 361

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 362 TGADSASVIFDAVQAAKARGIDVLIAD 388


>gi|308061448|gb|ADO03336.1| shikimate kinase [Helicobacter pylori Cuz20]
          Length = 162

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKNP------HVIST--------------GGGIVMHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|229070469|ref|ZP_04203712.1| hypothetical protein bcere0025_26550 [Bacillus cereus F65185]
 gi|229080176|ref|ZP_04212703.1| hypothetical protein bcere0023_28240 [Bacillus cereus Rock4-2]
 gi|228703071|gb|EEL55530.1| hypothetical protein bcere0023_28240 [Bacillus cereus Rock4-2]
 gi|228712675|gb|EEL64607.1| hypothetical protein bcere0025_26550 [Bacillus cereus F65185]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|229110392|ref|ZP_04239964.1| hypothetical protein bcere0018_26450 [Bacillus cereus Rock1-15]
 gi|228673132|gb|EEL28404.1| hypothetical protein bcere0018_26450 [Bacillus cereus Rock1-15]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|229185153|ref|ZP_04312340.1| hypothetical protein bcere0004_27080 [Bacillus cereus BGSC 6E1]
 gi|228598323|gb|EEK55956.1| hypothetical protein bcere0004_27080 [Bacillus cereus BGSC 6E1]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|218296954|ref|ZP_03497640.1| ABC transporter related [Thermus aquaticus Y51MC23]
 gi|218242657|gb|EED09193.1| ABC transporter related [Thermus aquaticus Y51MC23]
          Length = 261

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61
           G F++  G  G+GKTT + +L   L     +V +  +P    +P A A R  +LS     
Sbjct: 27  GEFLAVLGPNGSGKTTLLRILAGELSPSEGEVRLWGKPLTAYSPKALARRRAVLSQNRQI 86

Query: 62  FGAEAEAIVFAAARLDHVE 80
                   V    RL H+ 
Sbjct: 87  AFPLTAYEVAFLGRLPHIR 105


>gi|169334024|ref|ZP_02861217.1| hypothetical protein ANASTE_00417 [Anaerofustis stercorihominis
          DSM 17244]
 gi|169258741|gb|EDS72707.1| hypothetical protein ANASTE_00417 [Anaerofustis stercorihominis
          DSM 17244]
          Length = 305

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 24/52 (46%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            G   SF G  GAGK+T I +L   L + + DV +     G    E  +H+
Sbjct: 29 KKGQLFSFLGPNGAGKSTTIKILCTLLDKNDGDVFIDGFKLGNDDNEIRKHI 80


>gi|256851298|ref|ZP_05556687.1| signal recognition particle-docking protein FtsY [Lactobacillus
           jensenii 27-2-CHN]
 gi|260660722|ref|ZP_05861637.1| signal recognition particle-docking protein FtsY [Lactobacillus
           jensenii 115-3-CHN]
 gi|282933257|ref|ZP_06338644.1| FtsY-like protein [Lactobacillus jensenii 208-1]
 gi|297206167|ref|ZP_06923562.1| cell division protein FtsY [Lactobacillus jensenii JV-V16]
 gi|256616360|gb|EEU21548.1| signal recognition particle-docking protein FtsY [Lactobacillus
           jensenii 27-2-CHN]
 gi|260548444|gb|EEX24419.1| signal recognition particle-docking protein FtsY [Lactobacillus
           jensenii 115-3-CHN]
 gi|281302761|gb|EFA94976.1| FtsY-like protein [Lactobacillus jensenii 208-1]
 gi|297149293|gb|EFH29591.1| cell division protein FtsY [Lactobacillus jensenii JV-V16]
          Length = 434

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 13/91 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  + +   V +      T  A A   +       E+G   E  V
Sbjct: 237 GVNGAGKTTTIGKLAQRFKNQGKKVVLVA--ADTFRAGAVEQL------KEWGRRTETEV 288

Query: 71  FA----AARLDHVENVIRPALMEG-KILLCD 96
                 A     V + ++  L E    +L D
Sbjct: 289 VTGPVQADPASVVYDGVKHGLEEKADYVLVD 319


>gi|210615661|ref|ZP_03290707.1| hypothetical protein CLONEX_02925 [Clostridium nexile DSM 1787]
 gi|210150204|gb|EEA81213.1| hypothetical protein CLONEX_02925 [Clostridium nexile DSM 1787]
          Length = 232

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 7/87 (8%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  GAGK+T    + + L    Y    T   G    A A   +    G D+    A
Sbjct: 19 IAIDGPAGAGKSTIAKRVAKEL---GYVYVDT---GAMYRALAIYFLNQGLGTDDTEKIA 72

Query: 67 EAIVFAAARLDHVENVIRPALMEGKIL 93
          EA   A   L   EN ++   + G+ +
Sbjct: 73 EACKHAEVTLQ-YENGVQQVYLNGENV 98


>gi|75908277|ref|YP_322573.1| hypothetical protein Ava_2056 [Anabaena variabilis ATCC 29413]
 gi|75702002|gb|ABA21678.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 510

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 29/167 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
             G  I   G+ G+GK+T    L R L          R+  GG    E     L +    
Sbjct: 340 KQGKLILMSGLSGSGKSTTAKYLARQLDAIQIRSDAVRKHLGGISLWERGGDDLYTP--- 396

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118
           E   +  A +     +            +G  ++ D   D     Q     ++  HL L 
Sbjct: 397 EMTQKTYARLLNLGTI---------LANQGYTVILDAKYDKQNLRQEAIAQAEKHHLPLQ 447

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            +   +              P+++  +R+  R      A +D    +
Sbjct: 448 IIHCTA--------------PIEVIQERLIKRTGDIADATVDLLSSQ 480


>gi|325129203|gb|EGC52048.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis N1568]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|308388268|gb|ADO30588.1| probable signal recognition particle protein [Neisseria
           meningitidis alpha710]
 gi|319409567|emb|CBY89858.1| cell division protein FtsY [Neisseria meningitidis WUE 2594]
 gi|325133204|gb|EGC55874.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis M6190]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|302386600|ref|YP_003822422.1| ABC transporter [Clostridium saccharolyticum WM1]
 gi|302197228|gb|ADL04799.1| ABC transporter related protein [Clostridium saccharolyticum WM1]
          Length = 581

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 14/103 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-------LQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           I+  G  G GK+T I+LL RF       +Q    DV H+TR+   T      +   L  G
Sbjct: 372 IAIVGPTGCGKSTVINLLMRFYDVTCGSIQVDGTDVRHMTRQSLRTNYGMVLQETWLKSG 431

Query: 59  VDEF-----GAEA-EAIVFAAARLDHVENVIRPALMEGKILLC 95
                      EA E  +  AA+  H    IR        ++ 
Sbjct: 432 TIRENIAYGNPEASEEEIILAAKEAHAHGFIRRMPQGYDTVIS 474


>gi|254423746|ref|ZP_05037464.1| Phosphoribulokinase / Uridine kinase family [Synechococcus sp. PCC
           7335]
 gi|196191235|gb|EDX86199.1| Phosphoribulokinase / Uridine kinase family [Synechococcus sp. PCC
           7335]
          Length = 335

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 54/195 (27%), Gaps = 38/195 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GK+T +  L      +   V               R       V     +     
Sbjct: 15  GDSGCGKSTFLRRLADLFGEEFMTVI-----CLDDYHSLDRKQRKEKKVTALNPK----- 64

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             A   D +   I+ AL EG  +      D         +      ++  + I ++ + P
Sbjct: 65  --ANNFDLMYEQIK-ALKEGNTI------DKPIYNHETGELDPPEKVEPNKIIVIEGLHP 115

Query: 131 ----------DCTIILDLPVDI----GLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                     D ++ LD+  ++     ++R            L     +         + 
Sbjct: 116 LYDERVRNLLDFSVYLDISDEVKINWKIQRDMAERGHTYEDVLAAINARKPDF-----EA 170

Query: 177 FLDIARNQPDRCHIV 191
           ++D+ +   D    +
Sbjct: 171 YIDVQKQYADVVIQI 185


>gi|157964785|ref|YP_001499609.1| adenylate kinase [Rickettsia massiliae MTU5]
 gi|157844561|gb|ABV85062.1| Adenylate kinase [Rickettsia massiliae MTU5]
          Length = 213

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 81/234 (34%), Gaps = 52/234 (22%)

Query: 5   LFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I  F G  GAGK T    + + +           +       +  R ++ +       
Sbjct: 1   MVIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----T 44

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +EAE I     +   + N I   +++  +L  +    + Y   G   + +       +  
Sbjct: 45  SEAELINNYVKQGKLIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQT--KFFEAF 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DY 161
             +++     I LD+  ++ +KR+  RYS +    +                      DY
Sbjct: 101 IKEKIK---IIYLDVSDELLIKRILGRYSCKNCGKIYNSYFLQPKTDNVCDVCGSSTFDY 157

Query: 162 FERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
            +  +  + +KR +++      +          +IV+ + + Q +  +I  I+ 
Sbjct: 158 RKDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 211


>gi|118478276|ref|YP_895427.1| hypothetical protein BALH_2637 [Bacillus thuringiensis str. Al
          Hakam]
 gi|118417501|gb|ABK85920.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
          Hakam]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|297581816|ref|ZP_06943737.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           RC385]
 gi|297533910|gb|EFH72750.1| signal recognition particle-docking protein FtsY [Vibrio cholerae
           RC385]
          Length = 397

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 200 GVNGVGKTTTIGKLAKQFQAQGEKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 256 TGADSASVIYDAIEAAKARGIDVVIAD 282


>gi|15675985|ref|NP_273111.1| signal recognition particle protein [Neisseria meningitidis MC58]
 gi|9910689|sp|P57011|FTSY_NEIMB RecName: Full=Cell division protein ftsY homolog
 gi|7225266|gb|AAF40516.1| signal recognition particle protein [Neisseria meningitidis MC58]
 gi|316983616|gb|EFV62598.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis H44/76]
 gi|325199276|gb|ADY94731.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis H44/76]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|320528387|ref|ZP_08029549.1| signal recognition particle-docking protein FtsY [Solobacterium
           moorei F0204]
 gi|320131301|gb|EFW23869.1| signal recognition particle-docking protein FtsY [Solobacterium
           moorei F0204]
          Length = 323

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
            EG+ G+GKTT  + L R    +   V  T
Sbjct: 121 LEGVNGSGKTTTSAKLARMFLDQGKSVAFT 150


>gi|325111145|ref|YP_004272213.1| adenylylsulfate kinase [Planctomyces brasiliensis DSM 5305]
 gi|324971413|gb|ADY62191.1| adenylylsulfate kinase [Planctomyces brasiliensis DSM 5305]
          Length = 203

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 60/214 (28%), Gaps = 62/214 (28%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  + +   L +K                      +L       G     
Sbjct: 34  FTGLSGAGKSTVANTVDHLLHQKGIHTF-----------------VLDGDNVRMGLNKNL 76

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              A  R +++     V +     G  +L         A+     + +      L++   
Sbjct: 77  GFSAEDRAENIRRIGEVAKLFANSGIFVLT--------AFISPYRADRDQVRSILED--- 125

Query: 126 QEVMPDCTIILDLPVDIGLKR------VQNRYSLRES--ACLDYFERKDVMIHEKRRQIF 177
            E      +++D  ++    R       + R    +      D +E              
Sbjct: 126 GEF---IEVLVDASLETCEARDPKGLYKKARAGEIKGFTGIDDPYE-------------- 168

Query: 178 LDIARNQPDRCHIVDS-AHSFQSVATNILNIVWE 210
              A   P+    +D    S   +A  ++  + +
Sbjct: 169 ---APENPE--ITLDGDTKSIDELAAEVVQYLSD 197


>gi|159039699|ref|YP_001538952.1| adenylylsulfate kinase [Salinispora arenicola CNS-205]
 gi|157918534|gb|ABV99961.1| adenylylsulfate kinase [Salinispora arenicola CNS-205]
          Length = 508

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + GL I   G+ G+GK+T    L   L+ +      
Sbjct: 324 HRGLVIFLTGLSGSGKSTIARGLADALREQGERTIT 359


>gi|36939139|gb|AAQ86946.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|36939135|gb|AAQ86945.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|36939145|gb|AAQ86947.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|85373608|ref|YP_457670.1| signal recognition particle GTPase [Erythrobacter litoralis
           HTCC2594]
 gi|84786691|gb|ABC62873.1| signal recognition particle GTPase [Erythrobacter litoralis
           HTCC2594]
          Length = 304

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 36/142 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT I+ L  +L  ++Y+V                  +L+ G     A  E + 
Sbjct: 108 GVNGSGKTTTIAKLAHWLVEEDYEV------------------MLAAGDTFRAAAIEQLA 149

Query: 71  FAAARLDHVENVIRPALMEGK---ILL------CDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A R   V   I      G    I+        DR  D+       R  ++   +D L 
Sbjct: 150 TWADR---VGVPIVKGPQGGDPASIVFDGVKAGTDRGTDALVVDTAGRLQNKRELMDELA 206

Query: 122 EI--SVQEVMP----DCTIILD 137
           +I   +  + P    D  ++LD
Sbjct: 207 KIRKVLGRLNPEAPHDVILVLD 228


>gi|39997699|ref|NP_953650.1| cytidylate kinase [Geobacter sulfurreducens PCA]
 gi|59798057|sp|Q749Y7|KCY_GEOSL RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|39984591|gb|AAR35977.1| cytidylate kinase [Geobacter sulfurreducens PCA]
 gi|298506632|gb|ADI85355.1| cytidylate kinase [Geobacter sulfurreducens KN400]
          Length = 233

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            GL ++ +G  GAGK+T   LL   L
Sbjct: 6  RRGLIVAIDGPSGAGKSTITKLLADRL 32


>gi|218767303|ref|YP_002341815.1| probable signal recognition particle protein [Neisseria
           meningitidis Z2491]
 gi|9910688|sp|P57010|FTSY_NEIMA RecName: Full=Cell division protein ftsY homolog
 gi|121051311|emb|CAM07596.1| probable signal recognition particle protein [Neisseria
           meningitidis Z2491]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|325969208|ref|YP_004245400.1| ABC transporter [Vulcanisaeta moutnovskia 768-28]
 gi|323708411|gb|ADY01898.1| ABC transporter related protein [Vulcanisaeta moutnovskia 768-28]
          Length = 289

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 27/191 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEA--- 66
           G  GAGKTT I +L   L     + +V         +E  R + ++              
Sbjct: 36  GPNGAGKTTLIRILTTELMPHGGEAYVAGFDVVRQVSEVRRRIAVIPQDARPISYMTPYE 95

Query: 67  ----EAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 ++   +R D      R +L E G   L      ++  YQ      + + + ++ 
Sbjct: 96  FVYSYLLLRGLSRSD-AREATRNSLDELGLWEL-----RNTPVYQLSGGMMRRVLVAAVL 149

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             + +       + LD    +GL     R        L  +      I       +++ A
Sbjct: 150 ASNAE------VVFLD-EPTVGLDAASRR---IVWNSLRRYSNGGASIFLTTH--YIEEA 197

Query: 182 RNQPDRCHIVD 192
               D   ++D
Sbjct: 198 EQISDIVLLID 208


>gi|282856393|ref|ZP_06265672.1| twitching mobility protein [Pyramidobacter piscolens W5455]
 gi|282585764|gb|EFB91053.1| twitching mobility protein [Pyramidobacter piscolens W5455]
          Length = 361

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  G+GK+T ++ L  +L        VT E       E  R +L    +        A
Sbjct: 134 FTGPSGSGKSTALASLVDWLNETCRIHIVTLEDPIEFVHEGKRALLHQRQIGRDCPSFAA 193

Query: 69  IVFAAARLD 77
            +  A R D
Sbjct: 194 GLRDALRQD 202


>gi|237725685|ref|ZP_04556166.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|323141315|ref|ZP_08076210.1| hypothetical protein HMPREF9443_00982 [Phascolarctobacterium sp.
           YIT 12067]
 gi|229435493|gb|EEO45570.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|322414202|gb|EFY05026.1| hypothetical protein HMPREF9443_00982 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 181

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 41/221 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S++ +     +  VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGSPGTGKTTIASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL+  
Sbjct: 60  QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  ++      I+L    +  +KR   R      + LD   + +V + E   + F ++
Sbjct: 97  RALVREDYEVHY-IVLRASKEETMKRAVER------SKLDR--KTNVELVETMWEQFCNL 147

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220
              + +   ++D+   S        ++ V E +  R + LS
Sbjct: 148 GIYESN---VIDTTTYSI----QETVSAVQEKIASRAALLS 181


>gi|225181866|ref|ZP_03735302.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
 gi|225167450|gb|EEG76265.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
          Length = 422

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHV 53
          +  G  I+  G  GAGK+T +  + + L+  +  V    RE     + E AR +
Sbjct: 27 IQGGEMIALLGPNGAGKSTLMRCISKALEPSSGTVLFNDREIRSLSSGEIARQL 80


>gi|138894060|ref|YP_001124513.1| adenylylsulfate kinase [Geobacillus thermodenitrificans NG80-2]
 gi|134265573|gb|ABO65768.1| Adenylylsulfate kinase [Geobacillus thermodenitrificans NG80-2]
          Length = 203

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + R L                      ++ +L       G   + 
Sbjct: 30  FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              AA R +++     V +  +  G+ +L      S +A   E  +     ++  + I  
Sbjct: 73  GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126

Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
                   I ++ P++   KR          R  +RE   +D
Sbjct: 127 --------IYVNCPLEECEKRDPKGLYKKARRGEIREFTGID 160


>gi|170732108|ref|YP_001764055.1| adenylyl-sulfate kinase [Burkholderia cenocepacia MC0-3]
 gi|169815350|gb|ACA89933.1| Adenylyl-sulfate kinase [Burkholderia cenocepacia MC0-3]
          Length = 187

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGK+T  +LLK  L  +                   R  +L   +   G   +   
Sbjct: 24 GVSGAGKSTLSNLLKEQLDARG-----------------LRTFVLDGDLLREGLNQDLGF 66

Query: 71 FAAARLDHVE---NVIRPALMEGKILL 94
            A R +++     V R  +  G +++
Sbjct: 67 SDADRHENIRRTAEVARLMVDAGLVVI 93


>gi|154246521|ref|YP_001417479.1| spermidine/putrescine ABC transporter ATPase subunit
          [Xanthobacter autotrophicus Py2]
 gi|154160606|gb|ABS67822.1| spermidine/putrescine ABC transporter ATPase subunit
          [Xanthobacter autotrophicus Py2]
          Length = 372

 Score = 38.9 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G F++  G  G GKTT ++L+  FL+    ++ V+
Sbjct: 41 QGEFMTLLGPSGCGKTTLLNLIAGFLEADGGEIFVS 76


>gi|306820822|ref|ZP_07454446.1| cell division protein FtsY [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551140|gb|EFM39107.1| cell division protein FtsY [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 395

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 17/158 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GKTT I  L    + +   V +        AAE    +  +    +     
Sbjct: 197 IVIVGVNGVGKTTTIGKLASKFKNEGKSVLLAAGDTFRAAAEEQLEIWSTRAGVDIVRHN 256

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS- 124
           E+    A     + + I+ A  +   IL+CD            R  ++   ++ L +I  
Sbjct: 257 ES---GADPSAVIYDAIQRAKSKNTDILICD---------TAGRLHNKVNLMNELSKIMR 304

Query: 125 -VQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACL 159
            + +  PD    ++L +    G   +    +  E+  L
Sbjct: 305 IIGKQYPDAKKEVLLVIDATTGQNALNQVKTFNEAVEL 342


>gi|225849714|ref|YP_002729948.1| cytidylate kinase [Persephonella marina EX-H1]
 gi|225646087|gb|ACO04273.1| cytidylate kinase [Persephonella marina EX-H1]
          Length = 218

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 71/242 (29%), Gaps = 60/242 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ +G  G+GK+T    L R L    Y    T            R V      +    
Sbjct: 1   MIIAIDGPAGSGKSTVAKKLSRIL---GYTYIDT--------GAMYRAVAYKVKEEGIDP 49

Query: 65  EAEAIVFAAARLDHVENVIRPAL------MEGKILLCDRFLDSS-------------YAY 105
                       D V N+++           G  +  D    SS              A 
Sbjct: 50  ---------DNPDAVVNIMKRINIKLEPSDNGVKVFLDGEDVSSKIRTEEIGKIASKIAR 100

Query: 106 QGERDSS----QHLFLDSLQEISVQE------VMP--DCTIILDLPVDIGLKRVQNRYSL 153
             E        Q       +   ++       + P  D  I +    ++   R + R+  
Sbjct: 101 HPEVRKILVQKQREMGKKAKNAVIEGRDTGTVIFPDADLKIFMTASPEV---RARRRWEE 157

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDR----CHIVDSA-HSFQSVATNILNIV 208
            ++  LD  +   ++   K R       ++ P R      I+D+   S   V   IL +V
Sbjct: 158 LKNKGLD-IDYNRILKEVKERDHLDQTRKDSPLRPAKDAIIIDTTNKSIDEVINQILELV 216

Query: 209 WE 210
            +
Sbjct: 217 RK 218


>gi|217032012|ref|ZP_03437513.1| hypothetical protein HPB128_187g39 [Helicobacter pylori B128]
 gi|298736311|ref|YP_003728837.1| adenylate kinase [Helicobacter pylori B8]
 gi|216946322|gb|EEC24928.1| hypothetical protein HPB128_187g39 [Helicobacter pylori B128]
 gi|298355501|emb|CBI66373.1| adenylate kinase [Helicobacter pylori B8]
          Length = 191

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+   E  I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILAAIKSSEKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V +     + R   R     D    + V  H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVKVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +              +++   S + +   +   +   
Sbjct: 151 DPLVAIQNFYKAKHLHKVINGERSIEEIVNEMQKYILSF 189


>gi|217960385|ref|YP_002338945.1| hypothetical protein BCAH187_A2995 [Bacillus cereus AH187]
 gi|222096439|ref|YP_002530496.1| hypothetical protein BCQ_2779 [Bacillus cereus Q1]
 gi|229139579|ref|ZP_04268150.1| hypothetical protein bcere0013_26890 [Bacillus cereus BDRD-ST26]
 gi|217064039|gb|ACJ78289.1| hypothetical protein BCAH187_A2995 [Bacillus cereus AH187]
 gi|221240497|gb|ACM13207.1| hypothetical Cytosolic Protein [Bacillus cereus Q1]
 gi|228644126|gb|EEL00387.1| hypothetical protein bcere0013_26890 [Bacillus cereus BDRD-ST26]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|170743473|ref|YP_001772128.1| plasmid partitioning protein RepA [Methylobacterium sp. 4-46]
 gi|168197747|gb|ACA19694.1| plasmid partitioning protein RepA [Methylobacterium sp. 4-46]
          Length = 405

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  K Y V                   L     EF  EA   ++AA
Sbjct: 133 GSGKTTTAAHLAQYLALKGYRVLAVDLDPQASLTA------LHGYQPEFDVEANQTLYAA 186

Query: 74  ARLD 77
            R D
Sbjct: 187 IRYD 190


>gi|121633921|ref|YP_974166.1| signal recognition particle protein [Neisseria meningitidis FAM18]
 gi|120865627|emb|CAM09347.1| probable signal recognition particle protein [Neisseria
           meningitidis FAM18]
 gi|325139277|gb|EGC61821.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis ES14902]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|121703808|ref|XP_001270168.1| signal sequence receptor alpha subunit, putative [Aspergillus
           clavatus NRRL 1]
 gi|119398312|gb|EAW08742.1| signal sequence receptor alpha subunit, putative [Aspergillus
           clavatus NRRL 1]
          Length = 654

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 21/137 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65
           IS  G+ G GK+T++S +  FL + NY V +      T  + A   + +      E  A 
Sbjct: 447 ISIVGVNGVGKSTNLSKICYFLLQNNYRVLIAA--CDTFRSGAVEQLRVHARNLKELSAR 504

Query: 66  A---EAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFL 117
               E  ++         NV + A+  G      ++L D            R  +    +
Sbjct: 505 ETAGEVELYEKGYGKDAANVAKDAVEYGAANDFDVVLID---------TAGRRHNDQRLM 555

Query: 118 DSLQEISVQEVMPDCTI 134
            SL++ +     PD   
Sbjct: 556 SSLEKFAKFA-KPDKIF 571


>gi|58221317|gb|AAW68301.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 140

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGCNNVTVISQT-- 107

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|15889431|ref|NP_355112.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157291|gb|AAK87897.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
          Length = 352

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 26/165 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH------VTREPGGTPAAEAARHVLLS 56
            G F+SF G  G GKTT + ++  F       +        T  P         +   L 
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFEIPTGGSIVINGKDQTTLRPNQRNIGMVFQAYALF 87

Query: 57  CGVDEFGAEAEAIVFA----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
             ++ +   A  +  A    A     V+ +++   +E    L DR+      YQ      
Sbjct: 88  PNMNVYENVAFGLKVAGKPKAEIDARVKEMLQLIHLEH---LADRYP-----YQMSGGQQ 139

Query: 113 QHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRE 155
           Q + L            P+  ++LD  L       RV  R  +R+
Sbjct: 140 QRVALAR-----ALAPKPE-VLLLDEPLSALDAKIRVSLREEIRQ 178


>gi|148550186|ref|YP_001270288.1| signal recognition particle-docking protein FtsY [Pseudomonas
           putida F1]
 gi|148514244|gb|ABQ81104.1| signal recognition particle-docking protein FtsY [Pseudomonas
           putida F1]
          Length = 497

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 300 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 355

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 356 TGADSASVIFDAVQAAKARGVDVLIAD 382


>gi|330965439|gb|EGH65699.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 514

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 315 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 370

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 371 TGADSASVIFDAVQAAKARGIDVLIAD 397


>gi|319760308|ref|YP_004124246.1| adenylylsulfate kinase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039022|gb|ADV33572.1| adenylylsulfate kinase [Candidatus Blochmannia vafer str. BVAF]
          Length = 205

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 69/218 (31%)

Query: 7   IS--FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   F G+ G+GKTT  S L+  L  +    +                 +L      +G 
Sbjct: 35  IVLWFTGLSGSGKTTLASFLEERLYHEGISTY-----------------VLDGDNIRYGL 77

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            +        R +++     V       G ++L         A+     S + +      
Sbjct: 78  CSNLSFSHQDRYENIRRAGEVAWLMFDAGLVVL--------VAFISPCSSDRKMVR---N 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI----- 176
                       I +D P+++   R                + K++  +++ ++      
Sbjct: 127 MFFKNCF---LEIYIDTPIEVCKSR----------------DSKNL--YKQVQEGKIKNF 165

Query: 177 ------FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                 +   +   PD    +D   + Q +   + + V
Sbjct: 166 TGIDSPYE--SPENPDIY--LDGTKTIQELINQLFDAV 199


>gi|291563833|emb|CBL42649.1| Polyphosphate:AMP phosphotransferase [butyrate-producing
          bacterium SS3/4]
          Length = 493

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +I+F+G +GAGK   I  L + L  + +DV+ 
Sbjct: 34 YITFDGYDGAGKGVQIGRLMQALDPRGFDVYT 65


>gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter
           ruminantium M1]
 gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter
           ruminantium M1]
          Length = 444

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 14/117 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G++G+GKTT I  L R+LQRK +   V       PAA       L    +E   + 
Sbjct: 102 ILFLGLQGSGKTTTIGKLCRYLQRKGFSPAVVCTDTWRPAAYEQ----LKQLTEEMQIQL 157

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                    LD  E  ++      KI++ D            R  ++   ++ + ++
Sbjct: 158 YGDPDNKDALDLAEKGLKHF-KNQKIIIFD---------TAGRHKNEEDLIEEMNKL 204


>gi|238755111|ref|ZP_04616458.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473]
 gi|238706671|gb|EEP99041.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473]
          Length = 195

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 68/219 (31%), Gaps = 54/219 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  GAGKTT  + L + L    Y    T       +      ++   G  
Sbjct: 22  MTQTIFMV--GARGAGKTTIGNALAQAL---GYRFIDTDSFMQQTSLLTVAEIVAREGWS 76

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F       +        V +        G  +L       + A+               
Sbjct: 77  GFRRRESLAL------QTVTSPETVVATGGGAVLS----ADNRAFMRRHG---------- 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ------NRYSLRESACLDYFERKDVMIHEKRR 174
                        I L    DI  +R+        R SL     ++  E +DV+     R
Sbjct: 117 -----------LVIYLRASADILAERLAEEPEDAQRPSLTGKPIVE--EMQDVL---AVR 160

Query: 175 QI-FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           +  + D+A       +++D++   Q V   I +++ + +
Sbjct: 161 ETMYQDVAH------YVIDASRDPQWVVEQIQSLLLDAI 193


>gi|256394650|ref|YP_003116214.1| metallophosphoesterase [Catenulispora acidiphila DSM 44928]
 gi|256360876|gb|ACU74373.1| metallophosphoesterase [Catenulispora acidiphila DSM 44928]
          Length = 870

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 74/205 (36%), Gaps = 50/205 (24%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FGA 64
            +   G  G+GK+T      +  +           P    +++A R ++     D+    
Sbjct: 25  LVVLIGSSGSGKSTFAR---KHFR-----------PTAIVSSDACRGIVSDDENDQSATP 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EA A++       H+  V    L  G + + D              + Q    ++L +++
Sbjct: 71  EAFALLH------HIAGV---RLRRGLLTVVD------------ATNVQTKAREALVKLA 109

Query: 125 V-QEVMPDCTIILDLPVDIGLKRVQNRYSLRE--SACLDYFERKDVMIHEKRRQIFLDIA 181
              +V+P   I+LD+P  + + R   R    +  +  +    R+        R    ++A
Sbjct: 110 REHDVLP-IAIVLDIPERVCVDRNAERADRADLPARVISRQRRE-------LRSGLRNLA 161

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
           R    + H++    S + V   ++ 
Sbjct: 162 REGFRKVHVL---KSVEEVDQAVIA 183


>gi|159905567|ref|YP_001549229.1| chromatin associated protein KTI12 [Methanococcus maripaludis C6]
 gi|159887060|gb|ABX01997.1| Chromatin associated protein KTI12 [Methanococcus maripaludis C6]
          Length = 264

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 72/208 (34%), Gaps = 42/208 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+   GK+T    + + +  KN D  +          +  R          +  
Sbjct: 10  MLIILTGLPSVGKSTFSKAISKKMAEKNIDNIIL-------GTDLIRE-----SFPVWNE 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E  +      D    +I+ AL     ++ D   D++Y Y  +R       ++  +E +
Sbjct: 58  SYEEFI-----RDSNNYLIKEALRNKFSVIVD---DTNY-YNSKRR----DLINIAKECN 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLDIARN 183
              V     I L  P+D+ LKR   R     +  + + +E+ D              A +
Sbjct: 105 TNYVK----IYLKAPLDLLLKRNIERGQKIPNEVIKNMYEKFDTPGT--------KYAWD 152

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
            PD    VD+          ILN + E+
Sbjct: 153 LPD--ITVDTTEKID--HNEILNEILEI 176


>gi|153007417|ref|YP_001368632.1| putative fructose transport system kinase [Ochrobactrum anthropi
           ATCC 49188]
 gi|151559305|gb|ABS12803.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 213

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 51/155 (32%), Gaps = 16/155 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           L ++  G  GAGK+T    L   + +      + V  +          +  LLS      
Sbjct: 24  LIVAIAGPPGAGKSTISDYLLHAINKGGETPSIVVPMDGFHLDDGILDQRGLLSRKGSPP 83

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +         RL   E  I        I + DR L+ S A          + L     
Sbjct: 84  TFDCAGFAVLLQRLKQAEGEI-------FIPVFDRSLELSRAAASVVGPEHRVLLVEGNY 136

Query: 123 ISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
           + + +     + P  D T+ LD+P     +R+  R
Sbjct: 137 LLLDQQPWTQLAPFFDMTLYLDVPFAELERRLIER 171


>gi|27452784|gb|AAO12291.1| thymidine kinase [Porcine lymphotropic herpesvirus 2]
          Length = 578

 Score = 38.9 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 37/197 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCGVDEF 62
           FEG    GK+T I+ L++ ++     +    EP            +    +     V + 
Sbjct: 261 FEGAMAVGKSTMITHLQQVIEED--SIITFPEPMYYWTKVYNNVLKQIYKLNKYYRVGKE 318

Query: 63  GAEAEAI-------------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE- 108
            A AE +                  R  H ++   P     K ++ DR   S+       
Sbjct: 319 SASAELLACQVKFMTPLKTMWSYKQRCMHPDSPSAPVTPFDKWVIFDRHPLSATVVFPLI 378

Query: 109 ----RDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                  S + F++ L    +      D  +++ L +++  KR++ R+   E        
Sbjct: 379 LLKKGMLSFNDFINLLNTFTAANG---DTIVLMSLDIEVNYKRLKRRFRKYEGFV----- 430

Query: 164 RKDVMIHEKRRQIFLDI 180
             D+   ++ +  F  +
Sbjct: 431 --DIAHLKEVKAAFHAL 445


>gi|322693736|gb|EFY85586.1| signal sequence receptor alpha subunit [Metarhizium acridum CQMa
           102]
          Length = 654

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 20/136 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DE 61
           IS  G+ G GK+T++S +  FL +  Y V +    G T  + A   + +           
Sbjct: 446 ISIVGVNGVGKSTNLSKICFFLLQNKYKVLIAA--GDTFRSGAVEQLAVHVRNLKELTAR 503

Query: 62  FGAEAEAIV--FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   E     +        ++ +  A  EG  ++L D            R  +    + 
Sbjct: 504 EGGRVELYQKGYGKDAATVAKDAVSHAAQEGFDVVLID---------TAGRRHNDQRLMS 554

Query: 119 SLQEISVQEVMPDCTI 134
           SL++ +     PD  +
Sbjct: 555 SLEKFAKFA-QPDKIL 569


>gi|312891412|ref|ZP_07750929.1| deoxynucleoside kinase [Mucilaginibacter paludis DSM 18603]
 gi|311296106|gb|EFQ73258.1| deoxynucleoside kinase [Mucilaginibacter paludis DSM 18603]
          Length = 204

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 29/177 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I+  G  GAGKTT   LL +               G  P  EA   +  L     +    
Sbjct: 3   IAIVGNIGAGKTTLTELLAK-------------NYGWDPLYEAVDNNPYLEDFYSDMKRW 49

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLF 116
           +  +   F  +R   +  + +        ++ DR  + D+     +    G   +     
Sbjct: 50  SFNLQIYFLNSRFQQIIEIQKGQRQ----IIQDRTIYEDAFIFAENLHDMGLMTTRDFEN 105

Query: 117 LDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171
             S+ +   + +  PD  I L   V   +  +Q R    ES   LDY  + +    +
Sbjct: 106 YRSIFDNITEFIKPPDLLIYLKASVPTLVSNIQRRGREYESGIRLDYLSKLNDKYQK 162


>gi|302389883|ref|YP_003825704.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani
           DSM 16646]
 gi|302200511|gb|ADL08081.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani
           DSM 16646]
          Length = 346

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 42/210 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I   G  G+GKT+   +L   L         T E            +    G +
Sbjct: 1   MKNKTNIVLIGFMGSGKTSIGKMLAEKL---GKRFLDTDELIRQECGMEISEIFHKFGEE 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F  +              +  +  A      ++            G         ++ L
Sbjct: 58  YFRNKE-------------KETVERAAAREGTVIAT----------GGGVVLNPENMEKL 94

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +            + L    +  L+R+            +  E + + I+ KR  ++   
Sbjct: 95  RRSG-------IIVWLRASEEEILQRIS--GDASRPLASNKSESEILEIYSKRLNLYATY 145

Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIVW 209
           A        I++++    +++A  I+  + 
Sbjct: 146 AD------IIIETSGKDKEAIAIEIIKHLK 169


>gi|270295259|ref|ZP_06201460.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|282877641|ref|ZP_06286456.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|270274506|gb|EFA20367.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|281300213|gb|EFA92567.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 253

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 1   MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 54

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 55  ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 93

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ +++ PD  +  D+P
Sbjct: 94  DDAERMIATEDMKPD-VVFFDMP 115


>gi|227505036|ref|ZP_03935085.1| dephospho-CoA kinase [Corynebacterium striatum ATCC 6940]
 gi|227198400|gb|EEI78448.1| dephospho-CoA kinase [Corynebacterium striatum ATCC 6940]
          Length = 199

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 31/220 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEA-ARHVLLSC 57
             I   G  G+GK+T   LLK          +   D+    EP  T  AEA    ++   
Sbjct: 2   KLIGLTGGIGSGKSTVARLLKEQGWTVVDADQIARDIVEPGEPALTELAEAFGADIIRED 61

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G    G  A      AA    + ++  P +            ++   +   R + +   +
Sbjct: 62  GSLNRGLLATRAFGDAASTQRLNDITHPRIEA----------ETQRRFDAARSAGEEFVV 111

Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             +  +  + +    D TI++D+ V   ++R+     L E+        +          
Sbjct: 112 YDMPLLVDKGLHTGMDYTIVVDVDVATRVQRLVEFRGLDETDARRRIAAQISD------D 165

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
             L +A        ++D+  + + +   +  +V E+  K+
Sbjct: 166 ARLAVAD------FVIDNNGALEELPGQVERVVPEIAAKK 199


>gi|36939157|gb|AAQ86949.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 278

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 279 TAGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|56964654|ref|YP_176385.1| deoxypurine kinase [Bacillus clausii KSM-K16]
 gi|56910897|dbj|BAD65424.1| deoxypurine kinase [Bacillus clausii KSM-K16]
          Length = 209

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 51/183 (27%), Gaps = 35/183 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GKTT    L   L  K            T   +   +  L     +F   +
Sbjct: 10  ITVAGTVGVGKTTLTHALADELNFK------------TSFEKVDNNPYLDKFYRDFERWS 57

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             +   F A R        +  + EG   + DR +        +  + +     +  +  
Sbjct: 58  FHLQIYFLAERF----KEQKRMVEEGGGYIQDRSIYEDTGIFAKMHADKGTMTQTDYQTY 113

Query: 125 V----------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                          PD  I L    D  L R+Q R    E        +  +   E+  
Sbjct: 114 TSLFEAMVMTPYFPRPDVLIYLHGDFDSILDRIQARGREMEK-------QTPLSYWEEMY 166

Query: 175 QIF 177
             +
Sbjct: 167 NRY 169


>gi|309785182|ref|ZP_07679813.1| uncharacterized ATP-binding protein yghT [Shigella dysenteriae
           1617]
 gi|308926302|gb|EFP71778.1| uncharacterized ATP-binding protein yghT [Shigella dysenteriae
           1617]
          Length = 209

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 35/159 (22%)

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSL------ 120
             AR       +      G I+L DR+       AY G     +     F+  L      
Sbjct: 68  FVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQQRK 127

Query: 121 --QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQI 176
               ++     PD  I L++ +++   R     R SL     +       +         
Sbjct: 128 AFHWMASH--KPDLVIKLNVDLEVACMRKPDHKRQSLARKIAI----TPQLTF------G 175

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +          +D+    + V  +    + + +  R
Sbjct: 176 GAQLVD--------IDANRPLEQVLIDAEKAITDFMTAR 206


>gi|294501602|ref|YP_003565302.1| putative ABC transporter ATP-binding protein [Bacillus megaterium
           QM B1551]
 gi|294351539|gb|ADE71868.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium
           QM B1551]
          Length = 259

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 21/141 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G F+SF G  G GKTT +S++   ++  +  V +  E  GT        +          
Sbjct: 36  GEFVSFLGPSGCGKTTLLSIIAGLIEPSSGSVTIDGENIGTSVPNIGYMLQQDYLFPWKT 95

Query: 64  AEAEAIVFAAARLDHVENVIRPAL-------MEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            +   ++    R    +   + AL       ++G        +DS Y +Q      Q + 
Sbjct: 96  IKENILLGLEIRGQLTDETEKKALLLLKEIGLQG--------VDSLYPHQLSGGMRQRVA 147

Query: 117 LDSLQEISVQEVMPDCTIILD 137
           L  ++ +++    P   ++LD
Sbjct: 148 L--VRTLAID---PAI-LLLD 162


>gi|269123263|ref|YP_003305840.1| guanylate kinase [Streptobacillus moniliformis DSM 12112]
 gi|268314589|gb|ACZ00963.1| guanylate kinase [Streptobacillus moniliformis DSM 12112]
          Length = 181

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 24/168 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LFI   G  G+GK+T   L++  L         TR+           + +     +
Sbjct: 1   MKGKLFIV-SGPSGSGKSTVTKLVRDMLNIPLAISVTTRQIRTGEVDGKDYYFITKEEFE 59

Query: 61  EFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +   E     +A    ++   + + I   L  G+ ++ +         QG   +      
Sbjct: 60  KKINENGLFEYANVHGNYYGTLNSEIEKHLENGQNVILE------IDVQGGVIAKNKRND 113

Query: 118 DSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFER 164
             L             I    P ++   KR++ R +  E       E 
Sbjct: 114 SIL-------------IFFKAPSLEELEKRLRGRNTDSEKVIKKRLEN 148


>gi|222034708|emb|CAP77450.1| Uncharacterized ATP-binding protein yghS [Escherichia coli LF82]
 gi|307625411|gb|ADN69715.1| hypothetical protein UM146_01430 [Escherichia coli UM146]
          Length = 232

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++     +G +L+ DR+         
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225

Query: 207 IVWELV 212
            +   +
Sbjct: 226 AIHAAL 231


>gi|222081279|ref|YP_002540642.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family,
           permease/ATP-binding protein CydC [Agrobacterium
           radiobacter K84]
 gi|221725958|gb|ACM29047.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family,
           permease/ATP-binding protein CydC [Agrobacterium
           radiobacter K84]
          Length = 562

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 22/183 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T  ++L   L  ++  V        T   E  +  L            + ++
Sbjct: 376 GPSGAGKSTLFAILASELAAESGTVETVMASTLTQRTELFQDSLRDNLRLAASEANDDML 435

Query: 71  FAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
           ++A A    + +V   AL +G        +D+     G   S       +L  + ++   
Sbjct: 436 YSALADAGLLADVQ--ALPKG--------IDTRLGEGGLGLSGGQSRRLALARLFLRGTK 485

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
                +LD     GL R   R  +R  A         +  H + R+   +IA    DR  
Sbjct: 486 ---LWLLD-EPTEGLDRETGRDVMRRLASRSRGRSLVIATHIR-REA--EIA----DRIV 534

Query: 190 IVD 192
           ++D
Sbjct: 535 VLD 537


>gi|118090064|ref|XP_420493.2| PREDICTED: similar to bifunctional ATP sulfurylase/adenosine
           5-phosphosulfate kinase [Gallus gallus]
          Length = 800

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 235 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 280

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ + I     +P
Sbjct: 281 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 328

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 329 FFEVFVDAPLHVCEQR 344


>gi|150015820|ref|YP_001308074.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052]
 gi|149902285|gb|ABR33118.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052]
          Length = 255

 Score = 38.9 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          G FIS  G  G GK+T ++++   L+  N  V    E
Sbjct: 33 GKFISILGPSGCGKSTLLNIMSGLLEPSNGSVLYKGE 69


>gi|331697307|ref|YP_004333546.1| Guanylate kinase [Pseudonocardia dioxanivorans CB1190]
 gi|326951996|gb|AEA25693.1| Guanylate kinase [Pseudonocardia dioxanivorans CB1190]
          Length = 220

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 30/176 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I   G  G GK++ ++ L+  L   ++ V   TR P            +     D 
Sbjct: 16  RGRLIVLAGPSGVGKSSVVAQLRERLPELHFSVSATTRAPRVGEVDGRDYRFVSPAEFDG 75

Query: 62  FGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                E + +A       R       +  A  EG+ +L +  +D     QG R       
Sbjct: 76  LIERGELLEWAEIHGGLQRSGTPAAEVERARAEGRPVLVE--VD----LQGAR------- 122

Query: 117 LDSLQEISVQEVMPD-CTIILDLP-VDIGLKRVQNRYSLRESACLDYFE--RKDVM 168
                  +V++ +P+  T+ LD P  D   +R+ +R +   +      E  R+++ 
Sbjct: 123 -------AVKKAVPEAVTVFLDPPSFDELARRLGSRGTESAAQLARRLETAREELA 171


>gi|317122951|ref|YP_004102954.1| daunorubicin resistance ABC transporter ATPase [Thermaerobacter
           marianensis DSM 12885]
 gi|315592931|gb|ADU52227.1| daunorubicin resistance ABC transporter ATPase subunit
           [Thermaerobacter marianensis DSM 12885]
          Length = 389

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 76/232 (32%), Gaps = 45/232 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKN-----------YDVHVTREPGGTPAAEAARHVLLSCGV 59
           G  GAGKTT I +L   L+               + H  R+  G    E A   LL+   
Sbjct: 48  GPNGAGKTTTIKVLLSLLRPSGGTARVLGVDVAQEPHRVRQLIGWVPQETAVDPLLTGRE 107

Query: 60  DEFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +         +    AA R+D +  ++  A    +++           Y G       L 
Sbjct: 108 NLLLVAGLYHLPPGEAARRVDELLALVELAGAADRVV---------REYSGGMRKRLDLA 158

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  +   +         + LD    +GL  +Q R  L +      F      I       
Sbjct: 159 MGLVHRPA--------VLFLD-EPTLGLD-IQTRRRLWQYIRA--FRELGTTILLTTH-- 204

Query: 177 FLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           +L+ A    DR  I+D     +  +   +         E +Q R++P   ++
Sbjct: 205 YLEEADQLCDRVAIIDRGRIRALGTPDELKARYAA---ESLQLRLAPGQDRR 253


>gi|227820699|ref|YP_002824669.1| putative fructose transport system kinase [Sinorhizobium fredii
          NGR234]
 gi|227339698|gb|ACP23916.1| conserved hypothetical protein contains uridine kinase related
          domain [Sinorhizobium fredii NGR234]
          Length = 206

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 4/78 (5%)

Query: 3  SGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLL--SCG 58
          +G FI    G  GAGK+T    L   +     +V  +  +      A      LL     
Sbjct: 17 AGRFIVAIAGPPGAGKSTLSEALAAAIAETGENVAVLPMDGFHMDNAVLVEKGLLQRKGA 76

Query: 59 VDEFGAEAEAIVFAAARL 76
           + F   A     AA R 
Sbjct: 77 PETFDVRAFLSTLAAVRA 94


>gi|123442175|ref|YP_001006156.1| arginine/ornithine transport system ATPase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089136|emb|CAL11975.1| putative GTPase/ATPase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 331

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK+T +  L   L  + + V  +  +P     GG+   +  R + LS     F  
Sbjct: 61  GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 120

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94
              +             +I      G  I++
Sbjct: 121 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 151


>gi|160880461|ref|YP_001559429.1| deoxyadenosine kinase [Clostridium phytofermentans ISDg]
 gi|160429127|gb|ABX42690.1| Deoxyadenosine kinase [Clostridium phytofermentans ISDg]
          Length = 220

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 78/229 (34%), Gaps = 33/229 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+ G GKT++ ++L    Q    +V        +        +  +   +E   
Sbjct: 1   MVIVVGGMIGLGKTSYATMLGEHFQT---EVFY-----ESVEGNKILPLFYTSSEEEIQK 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLD 118
           +    +     LD     I+ A      +L DR +   + +       G     +    +
Sbjct: 53  KRYPFLLQLWFLDTRFRSIKQAFTNQNNIL-DRSIYEDWYFAKKNMELGRISDLEMEIYE 111

Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            L    ++E+       PD  I L    +  +KR+Q R    E       +   +  +  
Sbjct: 112 KLLHNMMEELKGLPKKSPDLMIYLKGSFETVIKRIQLRGREFE------IDNSLMDYYRF 165

Query: 173 RRQIFLDIARN--QPDRCHIVDSAHS----FQSVATNILNIVWELVQKR 215
             + + D  +N        I+D+ H+     +     ++  V E ++++
Sbjct: 166 LWEGYDDWVQNYYNASDILIIDTDHTDIVNKEEDRLRVIREVEEKLKRQ 214


>gi|77735371|ref|NP_001029382.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Bos
           taurus]
 gi|74268037|gb|AAI02373.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Bos taurus]
 gi|296486752|gb|DAA28865.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Bos
           taurus]
          Length = 624

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ + I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARRIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|54042814|sp|Q58954|NTPTH_METJA RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase THEP1;
           AltName: Full=Nucleoside triphosphate phosphohydrolase
          Length = 170

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 28/109 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTRE--PGGTPAAEAARHVLLSCGVDE 61
           FI+  G+ G GKTT    +   L+   Y V   +T+E   GG         + L    + 
Sbjct: 4   FIT--GMPGVGKTTLALKIAEKLKELGYKVGGFITKEIRDGGKRVGFKI--ITLDTNEET 59

Query: 62  FGAEAEAIVF----------AAARLDHVENV----IRPALMEGKILLCD 96
                  + +           A  +++++NV    I+ AL +  I++ D
Sbjct: 60  I------LAYVGDGKIKVGKYAVFIENLDNVGVEAIKRALKDADIIIID 102


>gi|83032925|ref|XP_729252.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23486518|gb|EAA20817.1| Arabidopsis thaliana At4g21800/F17L22_260 [Plasmodium yoelii
           yoelii]
          Length = 473

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 13/102 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54
           I+  G+ G+GKTT+I  L  +L+ +             V   + P      ++ +   V+
Sbjct: 183 IAI-GMAGSGKTTYIGALYNYLKIQKKKKVYTINLDPAVKHLQYPTNIDIRDSIKYHEVM 241

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   GA    +   A R D V  ++     +   ++ D
Sbjct: 242 KEYKLGPNGAIMTCLNLFATRFDKVIELLEKRKHKLNYIIVD 283


>gi|325293512|ref|YP_004279376.1| spermidine/putrescine ABC transporter ATP-binding protein
           [Agrobacterium sp. H13-3]
 gi|325061365|gb|ADY65056.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Agrobacterium sp. H13-3]
          Length = 352

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 26/165 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH------VTREPGGTPAAEAARHVLLS 56
            G F+SF G  G GKTT + ++  F       +        T  P         +   L 
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFEIPTGGSIVINGKDQTTLRPNQRNIGMVFQAYALF 87

Query: 57  CGVDEFGAEAEAIVFA----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
             ++ +   A  +  A    A     V+ +++   +E    L DR+      YQ      
Sbjct: 88  PNMNVYENVAFGLKVAGKPKAEIDARVKEMLQLIHLEH---LADRYP-----YQMSGGQQ 139

Query: 113 QHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRE 155
           Q + L            P+  ++LD  L       RV  R  +R+
Sbjct: 140 QRVALAR-----ALAPKPE-VLLLDEPLSALDAKIRVSLREEIRQ 178


>gi|319745950|gb|EFV98233.1| hypothetical protein HMPREF9171_0229 [Streptococcus agalactiae ATCC
           13813]
          Length = 195

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 80/221 (36%), Gaps = 42/221 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ +G    GKTT + ++      K Y          +P  +      L    ++   
Sbjct: 1   MIIAIQGGMAVGKTTALKII-----EKVYPKIAISFEDISPVVDKINKHQLD--NNKLDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114
             E        + H  +     + + +I+L D          ++      Y     S+  
Sbjct: 54  YCEIQQLF---IQHERDRYE-LVRDNEIVLMDYGAEEIAFYTQYFPKVAGYSWTLPSNLL 109

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH---E 171
           L ++ L+E        D  I LD    +  +R +N ++ R      +F  K    H    
Sbjct: 110 LEVNRLKECFA-----DYIIFLDADETVLYQRQKNDFNRRRH----FF--KWYTYHLLPA 158

Query: 172 KRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
           K  + +LD      +  H +++ H + + VA  I++I+ +L
Sbjct: 159 K--KHYLD---TFSNVIH-INTNHLNAEEVAEKIIDIIRKL 193


>gi|126657500|ref|ZP_01728656.1| guanylate kinase [Cyanothece sp. CCY0110]
 gi|126621204|gb|EAZ91917.1| guanylate kinase [Cyanothece sp. CCY0110]
          Length = 184

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 26/175 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M SG  I   G  G GK T +  L     +    +   TR P          + L     
Sbjct: 1   MASGKLIVLTGPSGVGKGTLVRALLNRHPQLYLSISATTRSPRQGEVEGNDYYFLSKSAF 60

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +    + + +    +A          +   + +G ++L                    L 
Sbjct: 61  ESMIEQDQLLEWAEYAGNYYGTPRAKVEEKINQGLLVL--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           ++ +   +++   PD   I  LP   +    R+++R +  E+A L   +R    +
Sbjct: 101 IEVIGAKAIKNSFPDALRIFILPPSIEELEYRLRSRKTDSEAAILRRLDRAKEEL 155


>gi|60101682|gb|AAX13965.1| chloroplast phosphoribulokinase [Chondrus crispus]
          Length = 377

 Score = 38.9 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 25/175 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAEAEAIVFA 72
           G GK+T +  +         +V  T  P G   +        L   +    A   A+  A
Sbjct: 52  GCGKSTFLRRVTGIF---GTEVSKTHTPVGNFISVICLDDYHLHDRMGRREARVTALDEA 108

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP-- 130
           A   + + + I+ AL EGK       +          +  +   ++    I ++ + P  
Sbjct: 109 ANNFELMASQIQ-ALREGK------SIMKPIYNHETGEIDECELVEPNHIIVIEGLHPMY 161

Query: 131 --------DCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKR 173
                   D ++ LDL  ++ +     R        L+      E +     +  
Sbjct: 162 DTRVKKSLDFSVYLDLADEVKIAWKIQRDMAERGHSLENILASIESRKPDFAQFV 216


>gi|330874697|gb|EGH08846.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 516

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 317 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 372

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 373 TGADSASVIFDAVQAAKARGIDVLIAD 399


>gi|321315326|ref|YP_004207613.1| adenylyl-sulfate kinase [Bacillus subtilis BSn5]
 gi|320021600|gb|ADV96586.1| adenylyl-sulfate kinase [Bacillus subtilis BSn5]
          Length = 197

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                 ++L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R +++     V +  + +G I++         A+       +    + ++     E
Sbjct: 76  SDEDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRQQVRELVEAGEFNE 127

Query: 128 VMPDCTIILDLPVDIGLKR 146
                 + +   +DI  +R
Sbjct: 128 ------VYIKCDLDICEQR 140


>gi|281203994|gb|EFA78190.1| UMP-CMP kinase [Polysphondylium pallidum PN500]
          Length = 194

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 78/206 (37%), Gaps = 39/206 (18%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK T  + + R      L     D+    +  G+   E    ++ +  +      
Sbjct: 13  GGPGSGKGTQCANIVRDFGYVHLSAG--DLLRAEQASGSEYGEMIATMIKNGEI------ 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEI 123
                        V +++   L++ K +L D     +Y   G   + +  + ++D+++++
Sbjct: 65  -------------VPSIVTVNLLK-KAILSD--TTKNYLVDGFPRNEENNNSWVDTMKDL 108

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE-KRRQIF-LDIA 181
              +      +  D P ++  +R+  R  L      D  E      +    +  F +D+ 
Sbjct: 109 VDTKF----VLFFDCPEEVMTERLLGRG-LSSGRTDDNLESIKKRFNTFNTQTKFVVDLY 163

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207
             + ++  IV+S  +   V T++ +I
Sbjct: 164 SKE-NKVKIVNSNRAVDLVYTDVKSI 188


>gi|253574584|ref|ZP_04851925.1| ABC transporter ATP-binding protein [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251846289|gb|EES74296.1| ABC transporter ATP-binding protein [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 310

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  ++  G  G+GK+T +  +++ L+    D    R  G + + E    +    G    
Sbjct: 30  KGYIVALVGPNGSGKSTMMQFIQQTLR---PDAGEIRWFGQSFSGELPLELRQQIGYVPE 86

Query: 63  GAEAEAIVFAAARLDHVENVIRPALME 89
             E E     A R     +   P   E
Sbjct: 87  APEPEENYMTAERAAEFRSQWYPTWDE 113


>gi|227821776|ref|YP_002825746.1| adenylate kinase [Sinorhizobium fredii NGR234]
 gi|227340775|gb|ACP24993.1| adenylate kinase [Sinorhizobium fredii NGR234]
          Length = 192

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 41/214 (19%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T   LL     R       T         +  R  +      E G  A+A
Sbjct: 5   FLGPPGAGKGTQAKLLTE---RYGIPQLST--------GDMLRAAV--AQATEVGKRAKA 51

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISV 125
           ++        V + I         ++ DR      A     D        ++   + +  
Sbjct: 52  VM---DAGQLVSDEIVNE------IVSDRIDAQDCAKGFILDGYPRTVPQAIALDRMLDS 102

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEKRR--- 174
           + +  D  + L +     ++R++NR         ++R     + F+R+     EK     
Sbjct: 103 KGLKLDAVVELKVDEAALVRRMENRVAETVAAGGTVRSDDNPEAFKRRLTEYREKTAPLS 162

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           + +      Q  +   VD     ++V   I  I+
Sbjct: 163 EHY-----AQTGQLKTVDGMADVEAVTAEIDKIL 191


>gi|225628587|ref|ZP_03786621.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti str.
           Cudo]
 gi|260166957|ref|ZP_05753768.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella sp. F5/99]
 gi|261756342|ref|ZP_06000051.1| spermidine/putrescine ABC transporter [Brucella sp. F5/99]
 gi|225616433|gb|EEH13481.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti str.
           Cudo]
 gi|261736326|gb|EEY24322.1| spermidine/putrescine ABC transporter [Brucella sp. F5/99]
          Length = 353

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|224369570|ref|YP_002603734.1| Cmk1 [Desulfobacterium autotrophicum HRM2]
 gi|223692287|gb|ACN15570.1| Cmk1 [Desulfobacterium autotrophicum HRM2]
          Length = 231

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL 28
              I+ +G  G+GKTT   L+ R L
Sbjct: 2  KPKIITIDGPAGSGKTTVSKLVARQL 27


>gi|254525852|ref|ZP_05137904.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9202]
 gi|221537276|gb|EEE39729.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9202]
          Length = 211

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          + G+ I F G+ G+GK+T  + L   L       H+ R        +  RH L
Sbjct: 33 HKGMVIWFTGLSGSGKSTLANALNEVL-------HLERFSTYVLDGDNIRHGL 78


>gi|16078624|ref|NP_389443.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309435|ref|ZP_03591282.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221313760|ref|ZP_03595565.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221318684|ref|ZP_03599978.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221322955|ref|ZP_03604249.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|7387596|sp|O34577|CYSC1_BACSU RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|2462959|emb|CAA04412.1| putative adenosine 5-phosphosulfate kinase [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|2633933|emb|CAB13434.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. 168]
 gi|291484112|dbj|BAI85187.1| adenylylsulfate kinase [Bacillus subtilis subsp. natto BEST195]
          Length = 197

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                 ++L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNRDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R +++     V +  + +G I++         A+       +    + ++     E
Sbjct: 76  SDEDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRQQVRELVEAGEFNE 127

Query: 128 VMPDCTIILDLPVDIGLKR 146
                 + +   +DI  +R
Sbjct: 128 ------VYIKCDLDICEQR 140


>gi|13541363|ref|NP_111051.1| Signal recognition particle GTPase [Thermoplasma volcanium GSS1]
 gi|14324747|dbj|BAB59674.1| signal recognition particle protein dpa [Thermoplasma volcanium
           GSS1]
          Length = 287

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 34/169 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---------EAARH 52
                I F GI G GKTT I  + ++L+ K   V ++        A         E    
Sbjct: 85  KKPFVIMFLGINGTGKTTTIGKVAKYLKSKGKSVVLSASDTFRAGAIEQLSMIGKEIGVE 144

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDS 111
           V+      +  + A              + I+ A       +L D            R +
Sbjct: 145 VIKHEKGSDPSSVAF-------------DAIQHAKARNIDYVLVD---------TAGRMN 182

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +    +D +++I  +   PD T+++ L    G   +    +  E+   D
Sbjct: 183 TNKNLMDEMKKI-KRVSNPDITLLV-LDAVAGQDSINQARTFHENVGFD 229


>gi|327183206|gb|AEA31653.1| excinuclease ABC subunit A [Lactobacillus amylovorus GRL 1118]
          Length = 946

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|253572795|ref|ZP_04850195.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
 gi|251837695|gb|EES65786.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
          Length = 265

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 13  MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 66

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 67  ---HEMGLIDSSTYFKALACDHFRRMKKN------------------AYTIVKSNAVNAL 105

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 106 DDAERMIATEDVKPD-VVFFDMP 127


>gi|220903660|ref|YP_002478972.1| Cobyrinic acid ac-diamide synthase [Desulfovibrio desulfuricans
          subsp. desulfuricans str. ATCC 27774]
 gi|219867959|gb|ACL48294.1| Cobyrinic acid ac-diamide synthase [Desulfovibrio desulfuricans
          subsp. desulfuricans str. ATCC 27774]
          Length = 275

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 11/88 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+  G  G GKTT  +    +L R  + V +          +A      S    +    A
Sbjct: 3  IAVSGKGGVGKTTITAWFGDYLARMGHQVWLVDADTALSLGQA------SGLDAQAMPVA 56

Query: 67 EAIVFAAARLDHVENVIRPALMEGKILL 94
                A R + V   IRPA   G ++L
Sbjct: 57 -----LAQRPELVRERIRPAGQGGMMVL 79


>gi|116250914|ref|YP_766752.1| hypothetical protein RL1144 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255562|emb|CAK06641.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 169

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 64/218 (29%), Gaps = 75/218 (34%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G GKT+    +   L+R+ Y V            +     +      +  A    
Sbjct: 8   IEGGSGTGKTS----VATELERRGYHVVH---------GDRVLAYVGDPETGQAFA---- 50

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                           P     +I+         + Y           +D ++ I+    
Sbjct: 51  ---------------GPPAGADRIV---------WGYAHW-----IWRVDKVRAIAADTT 81

Query: 129 MP------------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            P                  D   +LD+ V+   +R+  R +          ER  V+ +
Sbjct: 82  HPATFFCGGSRNFHKFLDLFDKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRY 138

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              R+ +L I  N       +D+  +  SV  +IL  +
Sbjct: 139 HHTRE-YLPIGIN-------IDTTGTVPSVVDDILAQL 168


>gi|104779581|ref|YP_606079.1| cell division protein FtsY [Pseudomonas entomophila L48]
 gi|95108568|emb|CAK13262.1| cell division protein FtsY [Pseudomonas entomophila L48]
          Length = 524

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 325 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 380

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 381 TGADSASVIFDAVQAAKARGVDVLIAD 407


>gi|28867657|ref|NP_790276.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28850892|gb|AAO53971.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|331014970|gb|EGH95026.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 513

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 314 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 369

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 370 TGADSASVIFDAVQAAKARGIDVLIAD 396


>gi|72161466|ref|YP_289123.1| guanylate kinase [Thermobifida fusca YX]
 gi|119371314|sp|Q47R17|KGUA_THEFY RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|71915198|gb|AAZ55100.1| guanylate kinase [Thermobifida fusca YX]
          Length = 196

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 43/209 (20%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
              G  G GK+T +  L+R        V   TR P          + +     D   AE 
Sbjct: 17  VLSGPSGVGKSTVVKELRRRRPEVWLSVSVTTRPPRPGETDGVEYYFVDDAEFDRLVAEN 76

Query: 67  EAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           E +    FA  R       +   L  G+ +L +  +D + A Q   +             
Sbjct: 77  ELLEWAEFAGNRYGTPREPVLKRLAAGQPVLLE--IDLNGARQVRAN------------- 121

Query: 124 SVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                MPD     +   P   +  ++R+  R +          E   +           +
Sbjct: 122 -----MPDAFLVFL--APPSWEELVRRLTGRGTESPEVIQRRLETARI-----------E 163

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +A  +     +V++  S   V   +L ++
Sbjct: 164 LAAEKEFDVTLVNT--SVHEVCDELLALI 190


>gi|26991787|ref|NP_747212.1| signal recognition particle-docking protein FtsY [Pseudomonas
           putida KT2440]
 gi|24986898|gb|AAN70676.1|AE016711_4 signal recognition particle receptor FtsY [Pseudomonas putida
           KT2440]
          Length = 494

 Score = 38.9 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 297 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 352

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 353 TGADSASVIFDAVQAAKARGVDVLIAD 379


>gi|325956387|ref|YP_004291799.1| excinuclease ABC subunit A [Lactobacillus acidophilus 30SC]
 gi|325332952|gb|ADZ06860.1| excinuclease ABC subunit A [Lactobacillus acidophilus 30SC]
          Length = 946

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|320180982|gb|EFW55903.1| hypothetical protein SGB_01805 [Shigella boydii ATCC 9905]
          Length = 151

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 27/124 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL--------L 55
            I+  G +G+GK+T    L   +++      VH+     G  A    R V+        L
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHL-----GKQAGNVGRAVVKQPLMGKSL 62

Query: 56  SCGVDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY-- 103
           +  ++    +          A+V  A  AR       +      G I+L DR+       
Sbjct: 63  NKSIERNKVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPG 122

Query: 104 AYQG 107
           AY G
Sbjct: 123 AYDG 126


>gi|296087318|emb|CBI33692.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 28/145 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  +                +  R         +
Sbjct: 505 QKGCVIWITGLSGSGKSTLACALSRALHFRG-------NLTYVLDGDNVR----HGLNRD 553

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE       R +++  +   A +         F DS         S      D+ +
Sbjct: 554 LSFRAE------DRAENIRRIGEVAKL---------FSDSGIICIASLISPYRKDRDACR 598

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
            +  +       + +D+P+++  +R
Sbjct: 599 AMLSEGNF--IEVFMDIPLEVCEER 621


>gi|261856138|ref|YP_003263421.1| signal recognition particle-docking protein FtsY [Halothiobacillus
           neapolitanus c2]
 gi|261836607|gb|ACX96374.1| signal recognition particle-docking protein FtsY [Halothiobacillus
           neapolitanus c2]
          Length = 391

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   GI GAGKTT I  L    ++  + V +    G T  A A   ++     ++     
Sbjct: 189 IVVCGINGAGKTTTIGKLAHHYKQSGHKVMLAA--GDTFRAAAVEQLITWGERNQIPVIG 246

Query: 67  E 67
           E
Sbjct: 247 E 247


>gi|193213426|ref|YP_001999379.1| guanylate kinase [Chlorobaculum parvum NCIB 8327]
 gi|193086903|gb|ACF12179.1| Guanylate kinase [Chlorobaculum parvum NCIB 8327]
          Length = 197

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 66/220 (30%), Gaps = 44/220 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAARHVLL 55
             G  I F    G GK+T   L+   L    + V  T       E  G       R    
Sbjct: 10  RQGRLIVFSAPSGTGKSTVAKLVMERLGCLEFSVSATTRAMRAGEEDGVDYHFLTRERF- 68

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
              + E G   E   F       +    R A+  G+ LL D             D    L
Sbjct: 69  -EQLIEEGGFIEHEFFFGNYYGTLLGKTREAVDAGRNLLFD------------LDVKGAL 115

Query: 116 FLDSLQ-EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            L  +  E +         + L  P   ++  +R+Q+R S    A     ER ++     
Sbjct: 116 NLKKIFGEWA-------LLVFLK-PPSMEVLAQRLQSRKSEAPEALAMRLERAEME---- 163

Query: 173 RRQIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWE 210
                L  A        +V  D   +   VA+ I   + +
Sbjct: 164 -----LACADQFD--FVVVNDDLERTVDLVASKIAQFLPQ 196


>gi|171741871|ref|ZP_02917678.1| hypothetical protein BIFDEN_00967 [Bifidobacterium dentium ATCC
           27678]
 gi|283456934|ref|YP_003361498.1| ABC transporter ATP-binding protein/permease [Bifidobacterium
           dentium Bd1]
 gi|306824179|ref|ZP_07457550.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium dentium ATCC 27679]
 gi|309801035|ref|ZP_07695165.1| ABC transporter, ATP-binding protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171277485|gb|EDT45146.1| hypothetical protein BIFDEN_00967 [Bifidobacterium dentium ATCC
           27678]
 gi|283103568|gb|ADB10674.1| ATP-binding and permease protein of ABC transporter system
           [Bifidobacterium dentium Bd1]
 gi|304552567|gb|EFM40483.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium dentium ATCC 27679]
 gi|308222261|gb|EFO78543.1| ABC transporter, ATP-binding protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 595

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 39/116 (33%), Gaps = 30/116 (25%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+  G  GAGKTT I+LL RF     YDV    E   T      R V L     + G
Sbjct: 380 GRTIALVGPTGAGKTTIINLLSRF-----YDV---AEGSVTIDGYDVRDVTLESLRRQMG 431

Query: 64  ----------------------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
                                    +A + AAAR  H    I         ++ +R
Sbjct: 432 VMLQDTFIFSGNVRDNIRYGKLDATDAEIEAAARAVHAHEFIMDLPDGYDTVVEER 487


>gi|29375651|ref|NP_814805.1| hypothetical protein EF1073 [Enterococcus faecalis V583]
 gi|29343112|gb|AAO80875.1| conserved hypothetical protein [Enterococcus faecalis V583]
          Length = 164

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + L + L+ +              + +  R  +L    DE G 
Sbjct: 4   KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 53  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 97

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 98  VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 127


>gi|254230125|ref|ZP_04923521.1| signal recognition particle-docking protein FtsY, putative [Vibrio
           sp. Ex25]
 gi|262392912|ref|YP_003284766.1| signal recognition particle receptor protein FtsY [Vibrio sp. Ex25]
 gi|151937370|gb|EDN56232.1| signal recognition particle-docking protein FtsY, putative [Vibrio
           sp. Ex25]
 gi|262336506|gb|ACY50301.1| signal recognition particle receptor protein FtsY [Vibrio sp. Ex25]
          Length = 407

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 210 GVNGVGKTTTIGKLAKQFQTQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 265

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 266 TGADSASVIYDAIEAAKARGVDVVIAD 292


>gi|315659098|ref|ZP_07911963.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590]
 gi|315495822|gb|EFU84152.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590]
          Length = 221

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 29/168 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L   L     +   + E              L    D+F   +
Sbjct: 12  ITIAGTVGVGKSTLTRALADKL-----NFKTSFENVDQNP-------YLDKFYDDFERWS 59

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117
             +   F A R        +     G   + DR +      +A     QG          
Sbjct: 60  FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHQEQGTMSPEDFQTY 115

Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDY 161
             L   + +      PD  I L+   D  ++R++ R    E +   DY
Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECNYDEVIERIKQRGRDMEINTEPDY 163


>gi|312793222|ref|YP_004026145.1| guanylate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180362|gb|ADQ40532.1| guanylate kinase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 199

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 50/227 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  GL I   G  G GK T +  L          +   TR+P            +     
Sbjct: 1   MREGLLIVISGPAGTGKGTVVGKLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E       + +A    ++    ++ +  AL +G  ++ +         QG     +   
Sbjct: 61  EEEIKNERFLEYAEYNNNYYGTPKDFVFEALEKGFDVILE------IETQGALKIKKAFS 114

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                         D  +I  LP   +   +R+  R +  E       E           
Sbjct: 115 --------------DAVLIFLLPPSIEELYRRLVKRGTESEDEIKARLE----------- 149

Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215
                IA+N+    P+    +++   +    A  I  I+  E ++ R
Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189


>gi|301017320|ref|ZP_07182084.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300400293|gb|EFJ83831.1| conserved hypothetical protein [Escherichia coli MS 69-1]
          Length = 232

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 67/246 (27%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFSR------ 181

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEIMQASLR 225

Query: 207 IVWELV 212
            +   +
Sbjct: 226 AIHAAL 231


>gi|298674029|ref|YP_003725779.1| PilT protein domain-containing protein [Methanohalobium evestigatum
           Z-7303]
 gi|298287017|gb|ADI72983.1| PilT protein domain protein [Methanohalobium evestigatum Z-7303]
          Length = 613

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T  + +  +L+ K++ V     P      +       S   ++
Sbjct: 267 QRGILIA--GPPGAGKSTFAAGIAVYLKEKDFVVKTMESPRDLQVPKEITQY--SPLDED 322

Query: 62  FGAEAEAIVF 71
               A+ ++ 
Sbjct: 323 MANTADLLLL 332


>gi|188996471|ref|YP_001930722.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|254806783|sp|B2V895|AROK_SULSY RecName: Full=Shikimate kinase; Short=SK
 gi|188931538|gb|ACD66168.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 166

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 57/198 (28%), Gaps = 44/198 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK+T   +L   L  K  D+    E          + +    G   F           
Sbjct: 11  GSGKSTVGKILAEKLNMKFVDIDKLIE---EKEGMKIKDIFEQKGESYF----------- 56

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
              +     I   + +  +++                      L+++  +       D  
Sbjct: 57  --RELERKQIEAIVNQEGLVVST-------------GGGLGANLNNMNLMKKNG---D-V 97

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           + LD+ ++  L R++N             E+   +  E  R+    +A         +++
Sbjct: 98  VWLDVSLNTVLDRLKNDQDRPLLKQP--IEKIKQLFEE--RKNVYRLAN------IRINA 147

Query: 194 A-HSFQSVATNILNIVWE 210
              +   +   IL  +  
Sbjct: 148 DKKTPSQIVEEILTKIKR 165


>gi|34535132|dbj|BAC87217.1| unnamed protein product [Homo sapiens]
          Length = 303

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 1   MNSGLF--ISFEGIEGAGKTTHISLLKRFLQR 30
           +  G F  ++ EG++  GKTT    +   L+ 
Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA 278


>gi|121605261|ref|YP_982590.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2]
 gi|120594230|gb|ABM37669.1| ABC transporter related protein [Polaromonas naphthalenivorans CJ2]
          Length = 255

 Score = 38.9 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 3/106 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEAI 69
           G  GAGK+T +  L   L        + +        + AR +  L              
Sbjct: 38  GPNGAGKSTLLKALAGLLPHSGTVALLGQPMAKMRGRDRARQLSWLGQNESSADDLTAYD 97

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           V    RL H   +  P+  +   +  +R L ++ A+         L
Sbjct: 98  VAMLGRLPHQAWLAPPSAADHAAV--ERALRATQAWDWRGRPLGQL 141


>gi|325145480|gb|EGC67754.1| signal recognition particle-docking protein FtsY [Neisseria
           meningitidis M01-240013]
          Length = 421

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q     V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAHGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|330841418|ref|XP_003292695.1| hypothetical protein DICPUDRAFT_40956 [Dictyostelium purpureum]
 gi|325077039|gb|EGC30779.1| hypothetical protein DICPUDRAFT_40956 [Dictyostelium purpureum]
          Length = 230

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 28/158 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL ++  G  G+GK T    LK      +Y+V            +  R V  S    E G
Sbjct: 14  GLRLTIIGAPGSGKGTQSEKLK-----NDYNV------QPISTGQILREV--SQEDSELG 60

Query: 64  AEAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               + + A   +  D + N+I  AL +           S++   G   + +    + L 
Sbjct: 61  RSISSKLAAGELISNDIMLNIIEKALDDK----------SNWLLDGYPRNPEQA--EHLD 108

Query: 122 EISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESAC 158
               ++ +P    + LD+P D+  +RVQ+R+    S  
Sbjct: 109 RFLTKKNIPLSLVLYLDVPEDVLAERVQDRWVHPGSGR 146


>gi|315037914|ref|YP_004031482.1| excinuclease ABC, A subunit [Lactobacillus amylovorus GRL 1112]
 gi|312276047|gb|ADQ58687.1| excinuclease ABC, A subunit [Lactobacillus amylovorus GRL 1112]
          Length = 946

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|229197123|ref|ZP_04323859.1| hypothetical protein bcere0001_26740 [Bacillus cereus m1293]
 gi|228586348|gb|EEK44430.1| hypothetical protein bcere0001_26740 [Bacillus cereus m1293]
          Length = 282

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNA-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|219118280|ref|XP_002179918.1| kinase adenylate kinase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408971|gb|EEC48904.1| kinase adenylate kinase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 316

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 21/105 (20%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHEKRR---QI 176
           I L++P  + ++RV  R +  ++  +                  ++     +K +   + 
Sbjct: 211 IFLNVPDSVLVERVVGRRTDPDTGKIYHMTFSPPEDEEIKARLVQRSDDTEQKVKVRLEQ 270

Query: 177 FLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWELVQKRVS 217
           F D      D+       VD   +   V+  IL  + E V  +V 
Sbjct: 271 FHDNVDAVKDKYTNIMVTVDGNQAPTQVSKEILEAIEEKVGSKVG 315


>gi|157412523|ref|YP_001483389.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9215]
 gi|157387098|gb|ABV49803.1| Adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9215]
          Length = 212

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          + G+ I F G+ G+GK+T  + L   L       H+ R        +  RH L
Sbjct: 34 HKGMVIWFTGLSGSGKSTLANALNEVL-------HLERFSTYVLDGDNIRHGL 79


>gi|24114293|ref|NP_708803.1| hypothetical protein SF3032 [Shigella flexneri 2a str. 301]
 gi|30064340|ref|NP_838511.1| hypothetical protein S3233 [Shigella flexneri 2a str. 2457T]
 gi|24053449|gb|AAN44510.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30042597|gb|AAP18321.1| hypothetical protein S3233 [Shigella flexneri 2a str. 2457T]
 gi|281602376|gb|ADA75360.1| putative ATP-binding protein yghS [Shigella flexneri 2002017]
          Length = 237

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGCYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +    +   G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126


>gi|305665164|ref|YP_003861451.1| adenylate kinase [Maribacter sp. HTCC2170]
 gi|88709916|gb|EAR02148.1| adenylate kinase [Maribacter sp. HTCC2170]
          Length = 368

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 40/209 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK T    LK     K+               +  R+ + +       A++       
Sbjct: 189 GAGKGTQAEFLKDKYNLKHI-----------STGDVFRYNIKNGTELGVLAKS-----YM 232

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLDSLQEI-SVQEVMPD 131
            + D V + +   +++ ++   ++  D S + + G   +      ++L      +E+  D
Sbjct: 233 DQGDLVPDEVTIKMLQDEV---EKNPDASGFIFDGFPRTVAQA--EALDRFLVSKEMKID 287

Query: 132 CTIILDLPVDIGLKRVQNRY-------SLRESACLDYFERKDVMIHEKRR--QIFLDIAR 182
            T+ LD   ++ ++R+  R           ES   + FE      ++K    Q++ +   
Sbjct: 288 ATLALDADDEVLIQRLLERGKVSGRSDDQDESKIRNRFE----EYNQKTAPLQVYYEAQ- 342

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               + H V+   + + +   +  ++ EL
Sbjct: 343 ---GKYHAVNGIGAIEDITRRLGKVIEEL 368


>gi|324500315|gb|ADY40152.1| Replication factor C subunit 2 [Ascaris suum]
          Length = 364

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 10/96 (10%)

Query: 4   GLF--------ISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G+F        I   G  G GKTT I  L    L  +  +  +          +  R+ +
Sbjct: 71  GMFAKQGNLPNIVISGPPGCGKTTSIWALARELLGTQIREACLELNASDDRGIDVVRNKI 130

Query: 55  LSCGVDEFG-AEAEAIVFAAARLDHVENVIRPALME 89
            S    +    E    +      D +    + AL  
Sbjct: 131 KSFAQTKVSLPEGRHKIIILDEADSMTEGAQQALRR 166


>gi|256811076|ref|YP_003128445.1| daunorubicin resistance ABC transporter ATPase subunit
           [Methanocaldococcus fervens AG86]
 gi|256794276|gb|ACV24945.1| daunorubicin resistance ABC transporter ATPase subunit
           [Methanocaldococcus fervens AG86]
          Length = 328

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 47/229 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVL 54
             G   +F G  GAGK+T I+++   L+          YDV               +   
Sbjct: 28  KKGEIFAFLGPNGAGKSTTINMITTLLKPTSGTIKVAGYDVVKNPNEVRKRIGIVFQDTT 87

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM-------EGKILLCDRFLDSSYAYQG 107
           L   +  +            R + ++  I   L          +I+           Y  
Sbjct: 88  LDRELTAYENLYIHGKIYGYRGEELKKRIEEMLEFVELKEHAHRIV----------KYFS 137

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK---RVQNRYSLRESACLDYFER 164
                +     +L         P+  + LD    +GL    R      ++E       E 
Sbjct: 138 GGMVRRLEIARALIH------KPEI-LFLD-EPTVGLDPQTRAHIWDYIKEMK-----EE 184

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILNIV 208
            ++ I       +++ A +  DR  I+D     +  +   + + I + +
Sbjct: 185 YNMTIFLTTH--YMEEAESLADRIAIIDNGKIIAMGTVDELKSIIGDDI 231


>gi|229258556|gb|ACQ45583.1| cell division protein FtsY [Vesicomya gigas gill symbiont]
          Length = 194

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  Q +   V +    G T  A A   + +    +     A+ + 
Sbjct: 45  GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVIAKTL- 101

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +  + A  +   ILL D
Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILLAD 127


>gi|170738682|ref|YP_001767337.1| adenylate kinase [Methylobacterium sp. 4-46]
 gi|168192956|gb|ACA14903.1| adenylate kinase [Methylobacterium sp. 4-46]
          Length = 199

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 33/215 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   G  GAGK T  + +       Q    D+       GTP    A+ ++ S G     
Sbjct: 3   IILLGPPGAGKGTQSARIVERFGIPQLSTGDMLRAAVAAGTPVGLQAKSIMESGG---LV 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   I     R++       P   +G   + D F          R  +Q   LD+L  +
Sbjct: 60  PDEVVIGIVGDRIE------EPDARKGF--ILDGF---------PRTVAQAKALDAL--L 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLDIAR 182
           + + +  D  I   +     + R+ NR +       +   +    +   +    +  +  
Sbjct: 101 AGKGLRLDAVIEFKVDEAALVGRIANRAAETLARGEVVRKDDTPEVFKTRL-DAYRSLTA 159

Query: 183 NQPDRC------HIVDSAHSFQSVATNILNIVWEL 211
              +          +D       V+  I  ++  L
Sbjct: 160 PLSEYYAGTGLLRPIDGMAPIDQVSREIEALLGGL 194


>gi|83814525|ref|YP_444724.1| sulfate adenylyltransferase large subunit [Salinibacter ruber DSM
           13855]
 gi|83755919|gb|ABC44032.1| sulfate adenylyltransferase, large subunit subfamily, putative
           [Salinibacter ruber DSM 13855]
          Length = 639

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 43/203 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    ++  L   +                    ++L       G   +   
Sbjct: 471 GLSGAGKSTIAKAVEERLFDADVQT-----------------MMLDGDNVRHGLSGDLGF 513

Query: 71  FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A R +    V  V R    +G + LC     S   YQ +RD ++ L  + +++  ++ 
Sbjct: 514 TPADRTENIRRVSEVARLFFEQGNVTLC--SFVSP--YQEDRDRARELLPEDVRDRFLEV 569

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            +       D P+++  +R             +  E  ++         +   A   PD 
Sbjct: 570 HV-------DCPLEVCKER-------DTKGLYEKAEAGEITNFTGVSAPYE--APEDPD- 612

Query: 188 CHIVDSAH-SFQSVATNILNIVW 209
             +V++     ++ A  I+  + 
Sbjct: 613 -VVVNTDEMGVEACADQIVEALE 634


>gi|70733142|ref|YP_262915.1| signal recognition particle-docking protein FtsY [Pseudomonas
           fluorescens Pf-5]
 gi|68347441|gb|AAY95047.1| signal recognition particle-docking protein FtsY [Pseudomonas
           fluorescens Pf-5]
          Length = 497

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 298 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 353

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 354 TGADSASVIFDAVQAAKARGIDVLIAD 380


>gi|50292329|ref|XP_448597.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527909|emb|CAG61560.1| unnamed protein product [Candida glabrata]
          Length = 315

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 11/82 (13%)

Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
          +GK+T    L  +L+ K  +V V  +          R    +    E     E  + +A 
Sbjct: 12 SGKSTVARELAGYLREKGANVVVHSDETLGHKGRETREEDYNDTHAERKLRNE--IMSAV 69

Query: 75 RLDHVENVIRPALMEGKILLCD 96
          R D         L    I++ D
Sbjct: 70 RRD---------LSRSTIVIVD 82


>gi|260062570|ref|YP_003195650.1| adenylylsulfate kinase [Robiginitalea biformata HTCC2501]
 gi|88784137|gb|EAR15307.1| adenylylsulfate kinase [Robiginitalea biformata HTCC2501]
          Length = 198

 Score = 38.9 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 22/36 (61%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          ++ L I F G+ G+GK+T  + L++ L  + Y  +V
Sbjct: 23 HNSLLIFFTGLSGSGKSTLANGLEQRLFEEGYKTYV 58


>gi|326388218|ref|ZP_08209821.1| adenylate kinase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207384|gb|EGD58198.1| adenylate kinase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 214

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 69/238 (28%), Gaps = 63/238 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    L     R       T         +  R  + +       A+A
Sbjct: 3   IILLGPPGAGKGTQSQRLVE---RHGLKQLST--------GDMLRAAVKAGTPVGLKAKA 51

Query: 67  EAIVFAAARLDHVENVIRPAL--------MEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                     + V + I  AL          G+  + D +          R ++Q   LD
Sbjct: 52  -----VMDAGELVSDEIVSALIGDELDVMGPGQGAIFDGY---------PRTAAQAESLD 97

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER----------KD 166
            +  ++ +    D  I LD+  D  ++R+  RY+         D FE+            
Sbjct: 98  GI--LASRGRKLDHVIELDVDEDALVERITGRYTCATCGKGYHDTFEKPAVEGTCDKCGG 155

Query: 167 VMIHEK-------RRQIFLD-IARNQP------DRCHI--VDSAHSFQSVATNILNIV 208
                +        R    +  A+  P       R  +  VD       V   I  ++
Sbjct: 156 HEFKRRPDDNEETVRTRMAEYRAKTAPILPIYEARGIVAHVDGMAQMDDVTAAIEAVI 213


>gi|225705042|gb|ACO08367.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial
           precursor [Oncorhynchus mykiss]
          Length = 351

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 69/223 (30%), Gaps = 28/223 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAE----AARHV 53
             IS +G   +GK      L   L          +Y   +T E    P A     +    
Sbjct: 58  KIISIDGNLASGKGALAKSLADKLGMLYMPEPNTHYLDKMTAEKEPLPIAFNGNCSLEKF 117

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QG 107
                  +  +          RL    + +   L  G+ ++ +R   S   +      QG
Sbjct: 118 YADPKAADGNSYRLQAWMYLMRLLQWSDAMEHLLTTGQGVILERSPYSDMVFVEAMFKQG 177

Query: 108 ERDSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                     + ++ IS+ + + P   I +D P +   K+++          L   E   
Sbjct: 178 YIRRQCVDHYNEIKGISICEFLPPHLVIYVDKPAEEVQKKLKASGKDVPLPYLKSIE--- 234

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSA--HSFQSVATNILNI 207
              ++K    +L       +     D+      + +A +I ++
Sbjct: 235 -DAYKKT---YLPKISENAE-LLAYDATQAQDMERIAEDIEDL 272


>gi|213402547|ref|XP_002172046.1| uridylate kinase [Schizosaccharomyces japonicus yFS275]
 gi|212000093|gb|EEB05753.1| uridylate kinase [Schizosaccharomyces japonicus yFS275]
          Length = 208

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 46/215 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T  S L +  +  +           +RE  G+   +  R  +    +     
Sbjct: 25  GGPGAGKGTQCSRLVKKYKLAHISAGDCLREEQSRE--GSKYGDLIRTYIKEGQIVPKEI 82

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             + +          E  ++    EG    L D F      YQ              +E+
Sbjct: 83  TIKLL----------EQKMKDYSAEGIDTFLIDGFPRKLDQYQAF------------EEM 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI--- 180
               +    T+      +  L R+ NR            E  +    +KR   +++    
Sbjct: 121 VCPALT---TLFFQCGQETMLARLLNRGKTSGR------EDDNTESIKKRFVTYVETSMP 171

Query: 181 ---ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              A  +  RC  +++ +   +V  +    + + +
Sbjct: 172 VIDAMKERGRCVTINAENDPDTVFEDTCAAMNKAL 206


>gi|158521993|ref|YP_001529863.1| cytidylate kinase [Desulfococcus oleovorans Hxd3]
 gi|158510819|gb|ABW67786.1| cytidylate kinase [Desulfococcus oleovorans Hxd3]
          Length = 222

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 50/215 (23%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
             L I+ +G  GAGKTT    L R L    Y    T            R V L+      
Sbjct: 2   KPLLITIDGPAGAGKTTVSKALARCL---GYRYVDT--------GALYRGVALAAKEKGV 50

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119
             E +        L+ +   +R            RF+   D S  + G+RD S  +    
Sbjct: 51  APEDD------DGLERLCTGLRL-----------RFVVNEDGSRLFDGDRDISGLIRTSE 93

Query: 120 LQEISVQ-EVMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHE 171
           +  ++      P      + DL   +G +     +  R+   + + E +     D  + E
Sbjct: 94  ISMLASAVSARP-VVRKFLFDLQRRLGEE-KNAVFEGRDMGTVVFPEAEVKFFLDASVEE 151

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
           + R+ + + + ++           + + +A  I  
Sbjct: 152 RARRRYDERSADE---------TRTLEQIAEEIRT 177


>gi|109111807|ref|XP_001099319.1| PREDICTED: nicotinamide riboside kinase 1 isoform 3 [Macaca
           mulatta]
 gi|109111809|ref|XP_001099414.1| PREDICTED: nicotinamide riboside kinase 1 isoform 4 [Macaca
           mulatta]
          Length = 199

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 75/231 (32%), Gaps = 55/231 (23%)

Query: 1   MNSGLFISFEGIEGA---GKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARH 52
           M +  FI   GI G    GKTT    L++ L       ++       E            
Sbjct: 1   MKT--FIV--GISGVTNGGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 56

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           VL +  +++  +     + +A R                ++  DR            +S+
Sbjct: 57  VLEALNMEKMMSTISCWMESARRS---------------VVSTDR------------ESA 89

Query: 113 QHLFLDSLQEISVQEVMP-DCTII-----LDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
           + + +  ++   +    P D TI      L +P +   +R   R          YF+   
Sbjct: 90  EEIPILIIEGFLLFNYKPLD-TIWNRSYFLTIPYEECKRRRSTRV-YEPPDSPGYFDGHV 147

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWELVQKR 215
             ++ K RQ   DI         +V  D   S + +   +   + + + K+
Sbjct: 148 WPMYLKHRQEMQDI------TWEVVYLDGTKSEEDLFLQVYEDLIQELAKQ 192


>gi|33865951|ref|NP_897510.1| ABC transporter, nitrate-like, ATP binding component
          [Synechococcus sp. WH 8102]
 gi|33633121|emb|CAE07932.1| ABC transporter, nitrate-like, ATP binding component
          [Synechococcus sp. WH 8102]
          Length = 251

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M SG FI+F G  G GK+T + L+ 
Sbjct: 25 MQSGEFITFVGSSGCGKSTLLRLIA 49


>gi|229258554|gb|ACQ45582.1| cell division protein FtsY [Calyptogena kilmeri gill symbiont]
          Length = 194

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  Q +   V +    G T  A A   + +    +     A+ + 
Sbjct: 45  GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVVAKTL- 101

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +  + A  +   ILL D
Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILLAD 127


>gi|170289124|ref|YP_001739362.1| cytidylate kinase [Thermotoga sp. RQ2]
 gi|281412787|ref|YP_003346866.1| cytidylate kinase [Thermotoga naphthophila RKU-10]
 gi|238688850|sp|B1LBI1|KCY_THESQ RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|170176627|gb|ACB09679.1| cytidylate kinase [Thermotoga sp. RQ2]
 gi|281373890|gb|ADA67452.1| cytidylate kinase [Thermotoga naphthophila RKU-10]
          Length = 220

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 58/240 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAA--EAARHVLLS 56
           I+ +G   +GK+T   LL   L   + +             E G +P++  E   + L +
Sbjct: 5   IAIDGPAASGKSTVARLLAEKLGFDHLNTGATYRAVAVYLHEKGLSPSSAEEEIENALKN 64

Query: 57  CGVDEF----------------GAEAEAIVFAAARLD----HVENVIRPALMEGKILLCD 96
             +D                    EA  +    ARL+    H+  + R    +  I++  
Sbjct: 65  LKIDYVNGRVYINGKDYTEKIQSPEAGVLASNFARLEVVRRHLVRIQREICDDKNIVV-- 122

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE- 155
                      E      + L +              I L   ++  ++R    Y  R  
Sbjct: 123 -----------EGRDIGTVVLPNAH----------LKIFLTASLEARVERKLKEYQKRGL 161

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVDS-AHSFQSVATNILNIVWELVQ 213
               +  ER+ +   E+  +   ++A  +P +   I+D+ + S + V   IL +V E + 
Sbjct: 162 KVTKEEVERELISRDEQDSK--RNVAPLKPAEDAVIIDTTSMSVEEVLDRILKLVRERMN 219


>gi|158316927|ref|YP_001509435.1| adenylylsulfate kinase [Frankia sp. EAN1pec]
 gi|158112332|gb|ABW14529.1| adenylylsulfate kinase [Frankia sp. EAN1pec]
          Length = 606

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
             GL I F G+ G+GK+T   LL   L  +   V +
Sbjct: 424 QRGLTILFTGLSGSGKSTLAGLLVCRLLERGRRVTL 459


>gi|120405375|ref|YP_955204.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium vanbaalenii PYR-1]
 gi|119958193|gb|ABM15198.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Mycobacterium vanbaalenii PYR-1]
          Length = 618

 Score = 38.9 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  + F G+ G+GK++   L+++ L  K    +                 +L     
Sbjct: 443 LTKGRTVWFTGLSGSGKSSVAMLVEQKLLEKGIPAY-----------------VLDGDNL 485

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILL 94
             G  ++     A R ++   +   A      G+++L
Sbjct: 486 RHGLNSDLGFSMADRAENQRRLAYVASILADSGQVVL 522


>gi|307330504|ref|ZP_07609646.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306883839|gb|EFN14883.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 333

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 62/208 (29%), Gaps = 32/208 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + +L   +           +DV  + E          +   L    D   
Sbjct: 51  GPNGAGKTTTVRILSTLIAADGGQAQVAGHDVATSPEGVRAAIGVTGQFAALD---DLLT 107

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--QGERDSSQHLFLDSLQ 121
           AE   ++      D +    R      K  L +RF  +  A+             LD L 
Sbjct: 108 AEENVLLM----ADLLRLGKREGRRRAKE-LLERFDIADVAHKRAAFFSGGMRRRLD-LA 161

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
              V +      I LD     GL     R        L       V +    +  +L+ A
Sbjct: 162 MTLVGDPQ---VIFLD-EPTTGLDPRSRRTMWETVRSL---VASGVTVFLTTQ--YLEEA 212

Query: 182 RNQPDRCHIVD-----SAHSFQSVATNI 204
               DR  ++D     +  +   +   I
Sbjct: 213 DQLADRIAVLDGGRIVAEGTADELKAQI 240


>gi|317054761|ref|YP_004103228.1| uridine kinase [Ruminococcus albus 7]
 gi|315447030|gb|ADU20594.1| uridine kinase [Ruminococcus albus 7]
          Length = 177

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IARNQPDRCH 189
           DC I +D P+DI + R   R    + A  D    +        R  ++  +    P+  +
Sbjct: 98  DCCIFIDTPLDIAMARRVLR--DMKEASADEIRNEMNTYLNAARVCYVQMLTEILPNSDY 155

Query: 190 IVDSAHSFQSVATNILNIVWE 210
           ++D A+  +++    + I+  
Sbjct: 156 VIDGANDLETIINEAMEIILR 176


>gi|218701760|ref|YP_002409389.1| hypothetical protein ECIAI39_3480 [Escherichia coli IAI39]
 gi|301019935|ref|ZP_07184070.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|218371746|emb|CAR19597.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli IAI39]
 gi|299882033|gb|EFI90244.1| conserved hypothetical protein [Escherichia coli MS 196-1]
          Length = 237

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L       H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 77  KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 135

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 136 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 186

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 187 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 230

Query: 207 IVWELV 212
            +   +
Sbjct: 231 AIHAAL 236


>gi|213967799|ref|ZP_03395946.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tomato T1]
 gi|301382436|ref|ZP_07230854.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061172|ref|ZP_07252713.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tomato K40]
 gi|302132035|ref|ZP_07258025.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213927575|gb|EEB61123.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. tomato T1]
          Length = 513

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 314 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 369

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 370 TGADSASVIFDAVQAAKARGIDVLIAD 396


>gi|229918063|ref|YP_002886709.1| uridine kinase [Exiguobacterium sp. AT1b]
 gi|229469492|gb|ACQ71264.1| uridine kinase [Exiguobacterium sp. AT1b]
          Length = 196

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 31/174 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N    ++ +G+ GAGKTT +S L                   +         ++      
Sbjct: 17  NRPFVVAIDGLSGAGKTTLVSYL---------------NNDPSIYVLHIDDYIVERDRRY 61

Query: 62  FGAEAEAIVFAAARLD--HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              + E+  + A + D   +E  +   L  G  +L        Y Y+ +  + + + +  
Sbjct: 62  QTGQLESTEYYALQWDVSRLERELFRPLRNGITVL----TLPRYVYERDVIAEEIVDISC 117

Query: 120 LQEISVQEV---MP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
              + V+ +    P      D  I LD P  +  +RV NR +          E+
Sbjct: 118 AHTVVVEGIFLQRPEWRSYFDYVIYLDCPRKVRYERVLNRDTYLGDPTA-RLEK 170


>gi|118475352|ref|YP_891968.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter fetus subsp. fetus 82-40]
 gi|118414578|gb|ABK82998.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter fetus subsp. fetus 82-40]
          Length = 183

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTR-EPGG 43
          G+GKTT I+ +   L  + Y V +T+ +PG 
Sbjct: 8  GSGKTTLIAKIASKLIEQGYKVAITKHDPGD 38


>gi|76800754|ref|YP_325762.1| ATPase [Natronomonas pharaonis DSM 2160]
 gi|76556619|emb|CAI48190.1| predicted ATPase [Natronomonas pharaonis DSM 2160]
          Length = 617

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 2/49 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
             G+ IS  G  GAGK+T    +  FL    + V    +P         
Sbjct: 258 QRGVLIS--GAPGAGKSTFAQAVAEFLDDSGFAVKTMEKPRDLQVGPEI 304


>gi|332088358|gb|EGI93477.1| hypothetical protein SD15574_3332 [Shigella dysenteriae 155-74]
          Length = 151

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 27/124 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL--------L 55
            I+  G +G+GK+T    L   +++      VH+     G  A    R V+        L
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHL-----GKQAGNVGRAVVKLPLMGKSL 62

Query: 56  SCGVDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY-- 103
           +  ++    +          A+V  A  AR       +      G I+L DR+       
Sbjct: 63  NKSIERNKVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPG 122

Query: 104 AYQG 107
           AY G
Sbjct: 123 AYDG 126


>gi|330898961|gb|EGH30380.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 494

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 295 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 350

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 351 TGADSASVIFDAVQAAKARGIDVLIAD 377


>gi|322712148|gb|EFZ03721.1| signal sequence receptor alpha subunit [Metarhizium anisopliae
           ARSEF 23]
          Length = 655

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 20/136 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65
           IS  G+ G GK+T++S +  FL +  Y V +    G T  + A   + +      E  A 
Sbjct: 446 ISIVGVNGVGKSTNLSKICFFLLQNKYKVLIAA--GDTFRSGAVEQLAVHVRNLKELTAR 503

Query: 66  A----EAIV--FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD 118
                E     +        ++ +  A  EG  ++L D            R  +    + 
Sbjct: 504 EGGQVELYQKGYGKDAATVAKDAVSHAAQEGFDVVLID---------TAGRRHNDQRLMS 554

Query: 119 SLQEISVQEVMPDCTI 134
           SL++ +     PD  +
Sbjct: 555 SLEKFAKFA-QPDKIL 569


>gi|308183954|ref|YP_003928087.1| shikimate kinase [Helicobacter pylori SJM180]
 gi|308059874|gb|ADO01770.1| shikimate kinase [Helicobacter pylori SJM180]
          Length = 162

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  ++L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHENLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKIDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|255654518|ref|ZP_05399927.1| putative lantibiotic ABC transporter,ATP-binding protein
          [Clostridium difficile QCD-23m63]
 gi|296449244|ref|ZP_06891030.1| mutacin ABC superfamily ATP binding cassette transporter, ABC
          protein [Clostridium difficile NAP08]
 gi|296880781|ref|ZP_06904730.1| ABC superfamily ATP binding cassette transporter,ABC protein
          [Clostridium difficile NAP07]
 gi|296261913|gb|EFH08722.1| mutacin ABC superfamily ATP binding cassette transporter, ABC
          protein [Clostridium difficile NAP08]
 gi|296428228|gb|EFH14126.1| ABC superfamily ATP binding cassette transporter,ABC protein
          [Clostridium difficile NAP07]
          Length = 234

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G  GAGK+T + +L   L+  +  +   R+P    + E    ++ S  +       E ++
Sbjct: 38 GPNGAGKSTTLKMLVGLLRPTDGRIIFDRKPWKRESLEKIGSLIESPALYGNLTAEENLL 97


>gi|222480225|ref|YP_002566462.1| cytidylate kinase [Halorubrum lacusprofundi ATCC 49239]
 gi|254807702|sp|B9LPV4|KCY_HALLT RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|222453127|gb|ACM57392.1| cytidylate kinase [Halorubrum lacusprofundi ATCC 49239]
          Length = 192

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 60/207 (28%), Gaps = 52/207 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G  G+GK+T+ + L   L     D             +  R             
Sbjct: 1   MLITVSGPPGSGKSTNAAGLADRL---GLDHV--------SGGDIFRE------------ 37

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                  AA R          A  + +I   DR LD    ++        +    L    
Sbjct: 38  ------MAAERDMTPVEFNEFAEEDPQI---DRDLDRRL-HEIATTRDDLVLESRLAGWL 87

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF------L 178
             +   D     D PV    +R+  R            ER++    ++ R+ +      L
Sbjct: 88  SADHA-DFRFWFDAPVSTRAERIAEREEKPVDRAKAETERREASEKKRYREYYDIDIGDL 146

Query: 179 DI-------ARNQPDRCH-----IVDS 193
            I       AR  P+R        +D+
Sbjct: 147 SIYDAAYNTARWGPERFIDVLVATIDA 173


>gi|219851207|ref|YP_002465639.1| signal recognition particle-docking protein FtsY [Methanosphaerula
           palustris E1-9c]
 gi|219545466|gb|ACL15916.1| signal recognition particle-docking protein FtsY [Methanosphaerula
           palustris E1-9c]
          Length = 409

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 27/138 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------V 59
           I F G+ G GKTT ++ +  FL +  + V +    G T  A A   + +           
Sbjct: 214 ILFTGVNGTGKTTTVAKVGAFLLKNGFSVVI--GAGDTFRAGAIEQIDIHAERLGIKVIQ 271

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            + G +  A++F     D V+  I   +    ++L D            R  ++   ++ 
Sbjct: 272 HQQGGDPSAVLF-----DTVQYAISHQI---DVVLAD---------TAGRFHNRANLMNQ 314

Query: 120 LQEISVQEVMPDCTIILD 137
           L +   + + PD  + +D
Sbjct: 315 LAK-VKRVMKPDLVVYVD 331


>gi|52424867|ref|YP_088004.1| putrescine/spermidine ABC transporter ATPase protein [Mannheimia
          succiniciproducens MBEL55E]
 gi|81825558|sp|Q65UE1|POTA_MANSM RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|52306919|gb|AAU37419.1| MalK protein [Mannheimia succiniciproducens MBEL55E]
          Length = 373

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          +N+G F++  G  G GKTT + L+  F +     + +  E
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLIAGFEEANGGQIILDGE 72


>gi|1709326|sp|P52978|NODQ_RHITR RecName: Full=Bifunctional enzyme nodQ; AltName: Full=Nodulation
           protein Q; Includes: RecName: Full=Sulfate
           adenylyltransferase subunit 1; AltName:
           Full=ATP-sulfurylase large subunit; AltName:
           Full=Sulfate adenylate transferase; Short=SAT; Includes:
           RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase
 gi|1107853|emb|CAA60914.1| NodQ protein [Rhizobium tropici CIAT 899]
 gi|1280529|gb|AAB08984.1| NodQ [Rhizobium tropici]
          Length = 632

 Score = 38.5 bits (89), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L+  L       +                 LL       G   +   
Sbjct: 466 GLSGSGKSTIANALEALLHTCGKHTY-----------------LLDGDNVRHGLNRDLGF 508

Query: 71  FAAARLD---HVENVIRPALMEGKILLC 95
            A  R++    V  V +     G I++C
Sbjct: 509 TAVDRVENIRRVAEVAKLMADAGLIVIC 536


>gi|325275629|ref|ZP_08141529.1| signal recognition particle-docking protein FtsY [Pseudomonas sp.
           TJI-51]
 gi|324099236|gb|EGB97182.1| signal recognition particle-docking protein FtsY [Pseudomonas sp.
           TJI-51]
          Length = 329

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ++   V +    G T  A A   + +    ++    A+   
Sbjct: 132 GVNGAGKTTTIGKLAKKLQQEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 187

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 188 TGADSASVIFDAVQAAKARGVDVLIAD 214


>gi|302035805|ref|YP_003796127.1| cytidylate kinase [Candidatus Nitrospira defluvii]
 gi|300603869|emb|CBK40201.1| Cytidylate kinase [Candidatus Nitrospira defluvii]
          Length = 232

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            GL I+ +G  G GK+T   LL   L
Sbjct: 11 KRGLIIAIDGPAGVGKSTVARLLALRL 37


>gi|254519749|ref|ZP_05131805.1| deoxyadenosine kinase [Clostridium sp. 7_2_43FAA]
 gi|226913498|gb|EEH98699.1| deoxyadenosine kinase [Clostridium sp. 7_2_43FAA]
          Length = 220

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 31/234 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GK++   +L    +               P       +  S   +E   + 
Sbjct: 2   IVVGGMIGLGKSSVAEILGEHFKSD----VFYESVDDNPILP----LFYSESEEEIQKKR 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYA--YQGERDSSQHLF------ 116
              +     L+     I+ AL+    +L DR  + D  +A         +          
Sbjct: 54  YPFLLQLYFLNTRFKSIKEALVHNNNVL-DRSIYEDWYFAKKNMELGRINDLEMKIYEDL 112

Query: 117 ----LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               L+ L+E+  +   PD  + L    +  L R+  R    E   +D   ++      K
Sbjct: 113 LHNMLEELEELPKKA--PDVMVYLKGSFETVLSRIALRGREFE---IDESLKEYYHFLWK 167

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNI-LNIVWELVQKRVSPLSSKKDI 225
               +++      +   I+D   +   V        + ELV++++  + + ++I
Sbjct: 168 DYDAWVENCYKASE-VLIID-MDNMDVVNNEADKEKLIELVEEKLREVRAIEEI 219


>gi|7387810|sp|Q12657|KAPS_PENCH RecName: Full=Adenylyl-sulfate kinase; AltName: Full=ATP
           adenosine-5'-phosphosulfate 3'-phosphotransferase;
           AltName: Full=Adenosine-5'-phosphosulfate kinase;
           Short=APS kinase
 gi|7245663|pdb|1D6J|A Chain A, Crystal Structure Of Adenosine 5'-Phosphosulfate (Aps)
           Kinase From Penicillium Chrysogenum
 gi|7245664|pdb|1D6J|B Chain B, Crystal Structure Of Adenosine 5'-Phosphosulfate (Aps)
           Kinase From Penicillium Chrysogenum
 gi|27065600|pdb|1M7G|A Chain A, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Ternary Structure With Adp And Aps
 gi|27065601|pdb|1M7G|B Chain B, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Ternary Structure With Adp And Aps
 gi|27065602|pdb|1M7G|C Chain C, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Ternary Structure With Adp And Aps
 gi|27065603|pdb|1M7G|D Chain D, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Ternary Structure With Adp And Aps
 gi|27065605|pdb|1M7H|A Chain A, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Structure With Aps Soaked Out Of One Dimer
 gi|27065606|pdb|1M7H|B Chain B, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Structure With Aps Soaked Out Of One Dimer
 gi|27065607|pdb|1M7H|C Chain C, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Structure With Aps Soaked Out Of One Dimer
 gi|27065608|pdb|1M7H|D Chain D, Crystal Structure Of Aps Kinase From Penicillium
           Chrysogenum: Structure With Aps Soaked Out Of One Dimer
 gi|1066330|gb|AAA81521.1| adenosine-5'phosphosulfate kinase [Penicillium chrysogenum]
          Length = 211

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 31/151 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T    L+  L  ++  VH  R               L      
Sbjct: 23  QRGLTIWLTGLSASGKSTLAVELEHQLV-RDRRVHAYR---------------LDGDNIR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118
           FG   +     A R +++  +   A +         F DS S A                
Sbjct: 67  FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNSIAITSFISPYRKDRDTAR 117

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKR 146
            L E++       +P   + +D+PV++  +R
Sbjct: 118 QLHEVATPGEETGLPFVEVYVDVPVEVAEQR 148


>gi|255525657|ref|ZP_05392590.1| Guanylate kinase [Clostridium carboxidivorans P7]
 gi|296185417|ref|ZP_06853827.1| guanylate kinase [Clostridium carboxidivorans P7]
 gi|255510643|gb|EET86950.1| Guanylate kinase [Clostridium carboxidivorans P7]
 gi|296050251|gb|EFG89675.1| guanylate kinase [Clostridium carboxidivorans P7]
          Length = 209

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 77/225 (34%), Gaps = 50/225 (22%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLS 56
           M   GL +   G  GAGK T    L   L++ ++       TR P      +   +  LS
Sbjct: 1   MKEKGLLVVISGPSGAGKGTICKAL---LEKNDFWLSVSATTRNPRVGEV-DGTNYYFLS 56

Query: 57  CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               +   ++E  +  A    +     ++ +  A+  GK ++ +  +D   A Q      
Sbjct: 57  KEEFQNRIKSEGFLEYAEVYGNYYGTPKDSVLSAVDSGKDVVLE--IDIQGALQ------ 108

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                       V+E  P+   I  LP       +R+ NR S  E + +  F        
Sbjct: 109 ------------VKETYPEGVFIFILPPSMKELRQRIINRGSETEESLMTRF-------- 148

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
              +  + +I         +V+      +V   +  I   ++ +R
Sbjct: 149 ---KAAYKEINYVSKYNYAVVN-----DTVVEAVKKIESIVIAER 185


>gi|182434098|ref|YP_001821817.1| putative phosphotransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462614|dbj|BAG17134.1| putative phosphotransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 202

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 28/114 (24%)

Query: 1   MNSGL-----FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
           M +GL      I+  G+  AGK+T   LL   L R    VHV          +  R +++
Sbjct: 14  MGTGLGPCVVLIT--GVMAAGKSTVAQLLAERLPRA---VHV--------RGDLFRRMIV 60

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI-------LLCD---RFL 99
           S   D    EAE           +   +  A  +          +L D   R++
Sbjct: 61  SGRADMAPDEAEEARSQLDLRQRLSAQVADAYADDGWTAVVQDIVLGDDLPRYV 114


>gi|167580694|ref|ZP_02373568.1| deoxynucleoside kinase family protein [Burkholderia thailandensis
           TXDOH]
 gi|167618798|ref|ZP_02387429.1| deoxynucleoside kinase family protein [Burkholderia thailandensis
           Bt4]
 gi|257138028|ref|ZP_05586290.1| deoxynucleoside kinase family protein [Burkholderia thailandensis
           E264]
          Length = 227

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 47/179 (26%), Gaps = 51/179 (28%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 18  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +    +  A + +     I  A      ++ D                   F+    EI 
Sbjct: 71  Q----LAFALQRERQAGEIAAAYEANMPIVAD-------------------FMPQKNEIF 107

Query: 125 VQEVMPD---------------------CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +  +PD                       + L    ++   R+Q R    E    D +
Sbjct: 108 ARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 166


>gi|162449010|ref|YP_001611377.1| sulfate adenylyltransferase [Sorangium cellulosum 'So ce 56']
 gi|190360260|sp|A9ENT2|SATC1_SORC5 RecName: Full=Probable bifunctional SAT/APS kinase 1; Includes:
          RecName: Full=Adenylyl-sulfate kinase; AltName:
          Full=APS kinase; AltName: Full=ATP
          adenosine-5'-phosphosulfate 3'-phosphotransferase;
          AltName: Full=Adenosine-5'-phosphosulfate kinase;
          Includes: RecName: Full=Sulfate adenylyltransferase;
          AltName: Full=ATP-sulfurylase; AltName: Full=Sulfate
          adenylate transferase; Short=SAT
 gi|161159592|emb|CAN90897.1| sulfate adenylyltransferase [Sorangium cellulosum 'So ce 56']
          Length = 578

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 1  MNSGL-FIS-FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M SG  F+  F G+ G+GK+T  ++L   L R+   V
Sbjct: 1  MASGEGFVVWFTGLSGSGKSTLAAMLAAELPRRGVHV 37


>gi|144900974|emb|CAM77838.1| Tetraacyldisaccharide 4'-kinase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 322

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           GAGKT     + R LQ +    H  TR  GGT A       L            EA++ A
Sbjct: 54  GAGKTPVCLAVARHLQERGRQPHFLTRGYGGTEAGPRLVDPLRHPASRVGD---EALLLA 110

Query: 73  A 73
           A
Sbjct: 111 A 111


>gi|157804014|ref|YP_001492563.1| adenylate kinase [Rickettsia canadensis str. McKiel]
 gi|166219997|sp|A8EZJ5|KAD_RICCK RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|157785277|gb|ABV73778.1| adenylate kinase [Rickettsia canadensis str. McKiel]
          Length = 212

 Score = 38.5 bits (89), Expect = 0.63,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 51/233 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T    + + +                   +  R ++ +       +
Sbjct: 1   MIVIFLGPPGAGKGTQGKKIAKKI-----------NVPHIAIGDIFRTIIKTS-----TS 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EAE I     + + + N I   +++  +L  +    + Y   G   + +       +   
Sbjct: 45  EAELINNYVRQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--QFFESFI 100

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162
            +++     I  D+  ++ +KRV  RYS +    +                      DY 
Sbjct: 101 TEKIK---IIYFDILDELLIKRVLGRYSCKNCGKIYNSYFLQPKTDSVCDVCGSSTFDYR 157

Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209
           +     + +KR +++      +          +IV+ + + Q +  +I  I+ 
Sbjct: 158 KDDTEEVIKKRIKVYKTETYPLIDYYKNSGHFYIVNGSKNEQEIEIDIQKILK 210


>gi|325968597|ref|YP_004244789.1| hypothetical protein VMUT_1081 [Vulcanisaeta moutnovskia 768-28]
 gi|323707800|gb|ADY01287.1| hypothetical protein VMUT_1081 [Vulcanisaeta moutnovskia 768-28]
          Length = 234

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          I   G +G+GKTT   LL   L+ + + 
Sbjct: 2  IVLIGPQGSGKTTLAKLLVEKLRAQGFR 29


>gi|293380198|ref|ZP_06626280.1| excinuclease ABC subunit A [Lactobacillus crispatus 214-1]
 gi|290923242|gb|EFE00163.1| excinuclease ABC subunit A [Lactobacillus crispatus 214-1]
          Length = 946

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|240126587|ref|ZP_04739473.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268685164|ref|ZP_06152026.1| signal recognition particle protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268625448|gb|EEZ57848.1| signal recognition particle protein [Neisseria gonorrhoeae
           SK-92-679]
          Length = 417

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            A        + ++ A   G  I+L D
Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|218663095|ref|ZP_03519025.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Rhizobium etli IE4771]
          Length = 254

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L R L  +    +                 +L       G   + 
Sbjct: 84  FTGLSGSGKSTIANALDRLLHARGKHTY-----------------VLDGDNVRHGLNRDL 126

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +     G I+L      S  +   +        ++  + I  
Sbjct: 127 GFTEADRVENIRRVAEVAKLMADAGLIVLV-----SLISPFRDERRMARELMEEDEFIE- 180

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P+D   +R
Sbjct: 181 --------IFVDTPLDECARR 193


>gi|158335564|ref|YP_001516736.1| adenylate kinase [Acaryochloris marina MBIC11017]
 gi|158305805|gb|ABW27422.1| adenylate kinase [Acaryochloris marina MBIC11017]
          Length = 187

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 68/218 (31%), Gaps = 49/218 (22%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64
            F G  G+GK+T         Q        T +      A   +  +         E   
Sbjct: 4   VFLGPPGSGKSTQAQAGAARWQ---IPSISTGDLLRDAIATQSDLGKQAQTHVEAGELVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +    +      +   +   PA   G  +L D F          R+ +Q   LD+L +I 
Sbjct: 61  DT---LMVGLMRESFGS---PATQNG-WIL-DGF---------PRNLAQTQALDTLLQIM 103

Query: 125 VQEVMPDC---TIILDLPVDIGLKRVQNRYSLRESACLDYFERK-------DVMIHEKRR 174
            Q          +  + P D+ ++R+  R    +S  L     +        ++   +RR
Sbjct: 104 GQ-----LYGQVVYFETPEDLLIERMLKRGRQDDSEDLIRQRLQIYNDQTTPLIDFYRRR 158

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           Q  ++           +D +     +   I + +  LV
Sbjct: 159 QCLIE-----------IDGSRPESEITDEIASALQPLV 185


>gi|156848898|ref|XP_001647330.1| hypothetical protein Kpol_1002p122 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118015|gb|EDO19472.1| hypothetical protein Kpol_1002p122 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 503

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 13/91 (14%)

Query: 91  KILLC-DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQ 148
           K +L  DR+  +  A +  +D S    L  ++E       PD  TI          + + 
Sbjct: 416 KAVLSEDRYAHAEMADEEAKDVSNLDDLVEIEEHVFNNFEPDYRTI---------EELIN 466

Query: 149 NRYSLRESACLDYFERKDVMIHEKRR--QIF 177
           N      S   D+ ++     H+KRR  + +
Sbjct: 467 NNSDGFNSTSNDFDDKSGRDSHKKRRFDEGY 497


>gi|268581261|ref|XP_002645613.1| Hypothetical protein CBG05336 [Caenorhabditis briggsae]
 gi|187035157|emb|CAP25831.1| hypothetical protein CBG_05336 [Caenorhabditis briggsae AF16]
          Length = 191

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 47/214 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARHVLLSCGVDEF 62
           G  G+GK T  S ++  L    Y VH++        RE  G+         + +  +   
Sbjct: 9   GPPGSGKGTICSKIQENL---GY-VHLSAGDLLRAERERAGSQFGALIESHIKNGSIVPV 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--SSYAYQGERDSSQHLFLDSL 120
                 +  A      +       L++G      R  D  S ++ Q      +       
Sbjct: 65  EITCSLLENAMN----LHKTANGFLVDGFP----RNADNLSGWSKQMSGKVHEQF----- 111

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR---QIF 177
                        + L  PVDI + R  NR   R    +D  +++    + +     + F
Sbjct: 112 ------------VLFLSCPVDICINRCLNRGEGRTDDNVDSLKKRVETYNNQTFPIIEHF 159

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +     +    VDS    + V  +++ +    
Sbjct: 160 GKL-----NMVRKVDSERPVEEVYEDVVKVFEAA 188


>gi|47568762|ref|ZP_00239457.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
 gi|228986042|ref|ZP_04146187.1| hypothetical protein bthur0001_27300 [Bacillus thuringiensis
          serovar tochigiensis BGSC 4Y1]
 gi|229156530|ref|ZP_04284620.1| hypothetical protein bcere0010_27150 [Bacillus cereus ATCC 4342]
 gi|47554542|gb|EAL12898.1| hypothetical protein cytosolic protein [Bacillus cereus G9241]
 gi|228626924|gb|EEK83661.1| hypothetical protein bcere0010_27150 [Bacillus cereus ATCC 4342]
 gi|228773754|gb|EEM22175.1| hypothetical protein bthur0001_27300 [Bacillus thuringiensis
          serovar tochigiensis BGSC 4Y1]
          Length = 282

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNA-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|319940241|ref|ZP_08014593.1| deoxyguanosine kinase [Streptococcus anginosus 1_2_62CV]
 gi|319810543|gb|EFW06879.1| deoxyguanosine kinase [Streptococcus anginosus 1_2_62CV]
          Length = 212

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 42/235 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G+ G GKTT+   L   L             G  P  E      +L    ++    
Sbjct: 2   IILAGMIGVGKTTYTYRLAEEL-------------GTQPFFEPVEENPILDKYYEDPDKY 48

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS--------SQH 114
             A+ ++   +      +I+ A  +   +L DR  + D+ + Y                 
Sbjct: 49  GFALQIYFLNKR---FKMIKAAYHDDNNIL-DRSIYEDALFTYINTLKGSISEQEYNIYL 104

Query: 115 LFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             LD++ E         PD  I LD   D  +  ++ R    E       E      ++ 
Sbjct: 105 ELLDNMMEEIQGLPKKAPDLLIYLDGSFDHIMNNIKKRGRDYEQPNE---ENGLADYYQL 161

Query: 173 RRQIFLDIARNQ----PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
             + + +   +       R     +         N  N V++ +Q+++  +  +K
Sbjct: 162 LYKHYQNWYEDYNYSPKMRI----ATDDLDIANPNDWNHVYQQIQQKMKTIGLEK 212


>gi|313648103|gb|EFS12549.1| uncharacterized ATP-binding protein yghS [Shigella flexneri 2a str.
           2457T]
          Length = 232

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGCYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +    +   G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 121


>gi|312898708|ref|ZP_07758097.1| guanylate kinase [Megasphaera micronuciformis F0359]
 gi|310620139|gb|EFQ03710.1| guanylate kinase [Megasphaera micronuciformis F0359]
          Length = 206

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 28/170 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G+ +   G  GAGK T    L+R     +Y V   TR P      +   +        
Sbjct: 3   TKGMLLVVSGPSGAGKGTICDALRRHFPHMDYSVSMTTRAPREGE-KDGVNYFFTDNDRF 61

Query: 61  EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E   E +A +  A   DH     ++ +   +  G  ++ +  +D   A Q ++  S  + 
Sbjct: 62  EELLEKDAFLEYAKVYDHYYGTPKDYVFNRMDAGHHVMLE--IDIQGAMQIKKAYSDAVC 119

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER 164
           +                    +P   +I  +R++NR +  +       ++
Sbjct: 120 IYV------------------VPPSLEILSQRLRNRRTDSDEVIRKRLDK 151


>gi|284990000|ref|YP_003408554.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160]
 gi|284063245|gb|ADB74183.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160]
          Length = 1223

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
            I  EG  GAGKTT ++  ++ L+ +   + V 
Sbjct: 461 LIVLEGAAGAGKTTTLAAARQLLEARGRRLLVV 493


>gi|296110129|ref|YP_003617078.1| adenylylsulfate kinase [Methanocaldococcus infernus ME]
 gi|295434943|gb|ADG14114.1| adenylylsulfate kinase [Methanocaldococcus infernus ME]
          Length = 177

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          N G  I   G  G GK+T    LK  L  + Y V
Sbjct: 5  NKGFTIWLTGPSGVGKSTLAQALKEKLLSQGYCV 38


>gi|261418739|ref|YP_003252421.1| adenylylsulfate kinase [Geobacillus sp. Y412MC61]
 gi|297531294|ref|YP_003672569.1| adenylylsulfate kinase [Geobacillus sp. C56-T3]
 gi|319765554|ref|YP_004131055.1| adenylylsulfate kinase [Geobacillus sp. Y412MC52]
 gi|261375196|gb|ACX77939.1| adenylylsulfate kinase [Geobacillus sp. Y412MC61]
 gi|297254546|gb|ADI27992.1| adenylylsulfate kinase [Geobacillus sp. C56-T3]
 gi|317110420|gb|ADU92912.1| adenylylsulfate kinase [Geobacillus sp. Y412MC52]
          Length = 203

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + R L                      ++ +L       G   + 
Sbjct: 30  FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              AA R +++     V +  +  G+ +L      S +A   E  +     ++  + I  
Sbjct: 73  GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126

Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
                   I ++ P++   KR          R  +RE   +D
Sbjct: 127 --------IYVNCPLEECEKRDPKGLYQKARRGEIREFTGID 160


>gi|206974003|ref|ZP_03234921.1| hypothetical protein BCH308197_2915 [Bacillus cereus H3081.97]
 gi|206748159|gb|EDZ59548.1| hypothetical protein BCH308197_2915 [Bacillus cereus H3081.97]
          Length = 282

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNA-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39


>gi|153011547|ref|YP_001372761.1| spermidine/putrescine ABC transporter ATPase subunit [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563435|gb|ABS16932.1| spermidine/putrescine ABC transporter ATPase subunit [Ochrobactrum
           anthropi ATCC 49188]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 55/178 (30%), Gaps = 52/178 (29%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVL 54
             G F+SF G  G GKTT + ++  F       ++    DV   + P         +   
Sbjct: 27  KKGEFVSFLGPSGCGKTTVLRMIAGFEAPDNGAIEIDGKDVVDLK-PNQRNIGMVFQAYA 85

Query: 55  LSCGVD-----------EFGAEAEA-----IVFAAARLDHVENVIRPALMEGKILLCDRF 98
           L   +                +AE       +    RLDH               L DR+
Sbjct: 86  LFPNMTVAQNVSFGLRVAGKPKAEIDATVQEMLGLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|85372983|ref|YP_457045.1| TrwC protein [Erythrobacter litoralis HTCC2594]
 gi|84786066|gb|ABC62248.1| TrwC protein [Erythrobacter litoralis HTCC2594]
          Length = 970

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
           I+ +GI GAGK++ +  +   L+ + + V 
Sbjct: 474 IAIQGIAGAGKSSVLKPVAEVLRDEGHPVI 503


>gi|145219829|ref|YP_001130538.1| hypothetical protein Cvib_1022 [Prosthecochloris vibrioformis DSM
           265]
 gi|145205993|gb|ABP37036.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
          Length = 519

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 32/198 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I  EG+ G+GKTTH + L              R           R +  S    E   
Sbjct: 334 MLIITEGLSGSGKTTHAAALSEM-----IGAVSVRSDIERKRLAGLRPLQRSSRETEPSI 388

Query: 65  EAEA---IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             EA     ++A     +       L     ++    +D+++  Q    S +  F+D  +
Sbjct: 389 YTEAKTGETYSALLAIALTT-----LQANLPII----VDATFLRQ----SDRQKFMDLAE 435

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +          +    P+++  +RV+ R      A        +   H +       ++
Sbjct: 436 SVGCGF----MIMSFHAPLELLKERVEKREQEASDASEAGIGVLEAQYHNR-----EALS 486

Query: 182 RNQPDRCHI-VDSAHSFQ 198
            ++ +R  I ++++    
Sbjct: 487 ASE-ERVAIHINTSEPVD 503


>gi|119356214|ref|YP_910858.1| guanylate kinase [Chlorobium phaeobacteroides DSM 266]
 gi|119353563|gb|ABL64434.1| guanylate kinase [Chlorobium phaeobacteroides DSM 266]
          Length = 194

 Score = 38.5 bits (89), Expect = 0.64,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 21/171 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61
           +G  + F    G GK+T   ++   +    + V  T  P      E   +  L     E 
Sbjct: 8   TGKLVVFSAPSGTGKSTIAKIVLERIPSLAFSVSATTRPMRAGEEEGVHYYFLDKKKFEE 67

Query: 62  ---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               G   E   F       + +    A+  G  LL D  LD        + +     L 
Sbjct: 68  KIRDGGFIEHEYFFNNYYGTLLDKTVDAVNSGHHLLFD--LD-------VKGALNLKTLF 118

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            L  + +    PD             +R+  R S    A     ER ++ +
Sbjct: 119 PLNSLLIFIRPPDM--------ATLRERLLKRESEDADALNVRLERAELEL 161


>gi|294853135|ref|ZP_06793807.1| iron(III) transport system ATP-binding protein [Brucella sp. NVSL
           07-0026]
 gi|294818790|gb|EFG35790.1| iron(III) transport system ATP-binding protein [Brucella sp. NVSL
           07-0026]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|254711378|ref|ZP_05173189.1| polyamine ABC transporter, ATP-binding protein [Brucella
           pinnipedialis B2/94]
 gi|254711978|ref|ZP_05173789.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti
           M644/93/1]
 gi|254715048|ref|ZP_05176859.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti
           M13/05/1]
 gi|256029992|ref|ZP_05443606.1| polyamine ABC transporter, ATP-binding protein [Brucella
           pinnipedialis M292/94/1]
 gi|256158156|ref|ZP_05456072.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti
           M490/95/1]
 gi|256252893|ref|ZP_05458429.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti
           B1/94]
 gi|261216752|ref|ZP_05931033.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           M13/05/1]
 gi|261219981|ref|ZP_05934262.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           B1/94]
 gi|261318983|ref|ZP_05958180.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           pinnipedialis B2/94]
 gi|261319619|ref|ZP_05958816.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           M644/93/1]
 gi|265987013|ref|ZP_06099570.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           pinnipedialis M292/94/1]
 gi|265996674|ref|ZP_06109231.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           M490/95/1]
 gi|260918565|gb|EEX85218.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           B1/94]
 gi|260921841|gb|EEX88409.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           M13/05/1]
 gi|261292309|gb|EEX95805.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           M644/93/1]
 gi|261298206|gb|EEY01703.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           pinnipedialis B2/94]
 gi|262550971|gb|EEZ07132.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti
           M490/95/1]
 gi|264659210|gb|EEZ29471.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           pinnipedialis M292/94/1]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|148560170|ref|YP_001258107.1| putative fructose transport system kinase [Brucella ovis ATCC
           25840]
 gi|148371427|gb|ABQ61406.1| kinase-related protein [Brucella ovis ATCC 25840]
          Length = 232

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%)

Query: 4   GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60
           G  I    G  GAGK+T    L   + +      +     G    +       LL     
Sbjct: 41  GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +         RL   E  I        I + DR L+ S A          + L   
Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150
             + +       + P  D T+ LD+P  +  +R+ +R
Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVPERRLTDR 190


>gi|56418949|ref|YP_146267.1| adenylylsulfate kinase [Geobacillus kaustophilus HTA426]
 gi|56378791|dbj|BAD74699.1| adenylylsulfate kinase [Geobacillus kaustophilus HTA426]
          Length = 203

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + R L                      ++ +L       G   + 
Sbjct: 30  FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              AA R +++     V +  +  G+ +L      S +A   E  +     ++  + I  
Sbjct: 73  GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126

Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
                   I ++ P++   KR          R  +RE   +D
Sbjct: 127 --------IYVNCPLEECEKRDPKGLYQKARRGEIREFTGID 160


>gi|332142571|ref|YP_004428309.1| UDP-galactose-lipid carrier transferase MED92 [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327552593|gb|AEA99311.1| UDP-galactose-lipid carrier transferase MED92 [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 279

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 70/228 (30%), Gaps = 42/228 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG + +GK   I  L   L  +   V    +P  +   +      L          
Sbjct: 54  LIVFEGWDASGKGGAIRRLTEKLDPRGVSVFPVAKPAQSDQEKH----FLYRFWKHIPPP 109

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLFLDSLQE 122
               +F   R  H              +L +R ++S      +Q            +L +
Sbjct: 110 GSLHIF--DRS-HYGR-----------VLVER-VNSLIERPIWQRSYREINEFE-QTLSD 153

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH-EKRRQIFLDIA 181
             V+ V     + + +      +R + R           ++  +  +H  + R  ++  A
Sbjct: 154 NGVRIVK----LFMHISSKEQRERFEERLH----NPFKRWKLTEEDLHNRRMRNEYIAAA 205

Query: 182 RNQPDR-------CHIVDSA---HSFQSVATNILNIVWELVQKRVSPL 219
                R        HI++      +   V   I+N + E V+    PL
Sbjct: 206 NEMFKRTHTSYAPWHIINGEYKWQARIDVLETIVNALSEGVEVAPPPL 253


>gi|76787120|ref|YP_330522.1| hypothetical protein SAK_1928 [Streptococcus agalactiae A909]
 gi|77405075|ref|ZP_00782175.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
 gi|76562177|gb|ABA44761.1| conserved hypothetical protein [Streptococcus agalactiae A909]
 gi|77176369|gb|EAO79138.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
          Length = 186

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 26/161 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ +G    GKTT + ++      K Y          +P  +      L    ++   
Sbjct: 1   MIIAIQGGMAVGKTTALKII-----EKVYPKIAISFEDISPVVDKINKHQLD--NNKLDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114
             E        + H  +     + + +I+L D          ++      Y     S+  
Sbjct: 54  YCEIQQLF---IQHERDRYE-LVRDNEIVLMDYGAEEIAFYTQYFPKVAGYSWTLPSNLL 109

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           L ++ L+E        D  I LD    +  +R +N ++ R 
Sbjct: 110 LEVNRLKECFA-----DYIIFLDADKTVLYQRQKNDFNRRR 145


>gi|332044064|gb|EGI80259.1| ATPase-like protein [Lacinutrix algicola 5H-3-7-4]
          Length = 180

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 71/220 (32%), Gaps = 49/220 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+   I   G  G+GKT+ I+ L           H T         E +R + L    D
Sbjct: 1   MNT-KTIVITGGPGSGKTSVINELTNR--------HFTCFE------EISRQITLKARED 45

Query: 61  EF------GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                        + +    R+      I       + +  DR +    AY    D    
Sbjct: 46  GIEQLFLTNPLQFSELLLDGRIKQYNEAIE---SNNEFVFLDRGIPDIPAYM---DFKGD 99

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--VMIHEK 172
            + D   +  ++    +   IL              +    ++  + +E  D  + IHEK
Sbjct: 100 EYPDVFNDACLKNKY-NAVFIL------------APWQEIFTSDSERYENFDQAIEIHEK 146

Query: 173 RRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211
             + + +          ++D    S ++   +I+NIV  L
Sbjct: 147 LVETYTNC------GYDLIDVPFGSIEARTEHIINIVKAL 180


>gi|238787075|ref|ZP_04630875.1| LAO/AO transport system kinase [Yersinia frederiksenii ATCC 33641]
 gi|238724863|gb|EEQ16503.1| LAO/AO transport system kinase [Yersinia frederiksenii ATCC 33641]
          Length = 318

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK+T +  L   L  + + V  +  +P     GG+   +  R + LS     F  
Sbjct: 48  GTPGAGKSTFLEALGEELLSQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 107

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94
              +             +I      G  I++
Sbjct: 108 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 138


>gi|262200458|ref|YP_003271666.1| hypothetical protein Gbro_0439 [Gordonia bronchialis DSM 43247]
 gi|262083805|gb|ACY19773.1| hypothetical protein Gbro_0439 [Gordonia bronchialis DSM 43247]
          Length = 188

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M +G+ ++ +G  GAGK+T    L   L        + R
Sbjct: 24 MTTGI-VAIDGPSGAGKSTLADALMATLAANGTGAVLVR 61


>gi|20453809|gb|AAM22121.1|AF478169_14 thymidine kinase [porcine lymphotropic herpesvirus 1]
          Length = 580

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCGVDEF 62
           FEG    GK+T I+ L++ ++     +    EP            +    +     V + 
Sbjct: 261 FEGAMAVGKSTMITHLQQVIEED--SIITFPEPMYYWTKVYNNVLKQIYKLNKYYRVGKE 318

Query: 63  GAEAEAI-------------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--- 106
            A AE +                  R  H ++   P     K ++ DR   S+       
Sbjct: 319 SASAELLACQVKFMTPLKTMWSFKQRCMHPDSPSAPVTPFDKWVIFDRHPLSATVVFPLI 378

Query: 107 --GERDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYF 162
                  S + F++ L    +      D  +++ L +++  KR++ R+   E    L + 
Sbjct: 379 LLKRGMLSFNDFINLLNTFTAANG---DTIVLMSLDIEVNYKRLKRRFRKYEGFVDLAHL 435

Query: 163 ERKDVMIH 170
           +      H
Sbjct: 436 KEVKAAFH 443


>gi|23499877|ref|NP_699317.1| spermidine/putrescine ABC transporter ATP-binding protein [Brucella
           suis 1330]
 gi|161620200|ref|YP_001594086.1| polyamine ABC transporter, ATP-binding protein [Brucella canis ATCC
           23365]
 gi|163844308|ref|YP_001621963.1| polyamine ABC transporter, ATP-binding protein [Brucella suis ATCC
           23445]
 gi|254702543|ref|ZP_05164371.1| polyamine ABC transporter, ATP-binding protein [Brucella suis bv. 3
           str. 686]
 gi|260568552|ref|ZP_05839021.1| spermidine/putrescine ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261753116|ref|ZP_05996825.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis
           bv. 3 str. 686]
 gi|23463451|gb|AAN33322.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella suis 1330]
 gi|161337011|gb|ABX63315.1| polyamine ABC transporter, ATP-binding protein [Brucella canis ATCC
           23365]
 gi|163675031|gb|ABY39141.1| polyamine ABC transporter, ATP-binding protein [Brucella suis ATCC
           23445]
 gi|260155217|gb|EEW90298.1| spermidine/putrescine ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261742869|gb|EEY30795.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis
           bv. 3 str. 686]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|28377820|ref|NP_784712.1| deoxyguanosine kinase [Lactobacillus plantarum WCFS1]
 gi|254556004|ref|YP_003062421.1| deoxyguanosine kinase [Lactobacillus plantarum JDM1]
 gi|300767806|ref|ZP_07077716.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308179998|ref|YP_003924126.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|28270653|emb|CAD63559.1| deoxyguanosine kinase [Lactobacillus plantarum WCFS1]
 gi|254044931|gb|ACT61724.1| deoxyguanosine kinase [Lactobacillus plantarum JDM1]
 gi|300494791|gb|EFK29949.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308045489|gb|ADN98032.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 211

 Score = 38.5 bits (89), Expect = 0.65,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 76/223 (34%), Gaps = 36/223 (16%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKT+   L+      K             P                   +  A +   
Sbjct: 9   GAGKTSLTQLVANHFGSK----AFYESVDDNPILPLFYK----------DPKKYAFLLQI 54

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLDSLQEISVQE 127
             L+   + I+ A      +L DR  F DS   +     G   +++    DSL +  +QE
Sbjct: 55  YFLNKRLDSIKSAFANDLDVL-DRSIFEDSLLFHLNGDLGRATNTEVDIYDSLLDNMMQE 113

Query: 128 VM-------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLD 179
           +        PD  I +++  D  LKR+Q R    E    D     D+   ++   + + D
Sbjct: 114 LPEASHQKSPDLLIHINISFDTMLKRIQKRGRSYEQIDQDP----DLYKYYQTLNERYDD 169

Query: 180 IARNQPDRCHI-VDSAHSFQSVA-TNILNIVWELVQKRVSPLS 220
              N      + +D       VA  +    V  L+ ++V+ L 
Sbjct: 170 WYANYDHSPKMQIDGDQ-LDFVADADARKEVIRLIDEKVASLG 211


>gi|332174368|gb|AEE23622.1| adenylylsulfate kinase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 198

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +LL++ L       +                 LL       G   +   
Sbjct: 32  GLSGSGKSTIANLLEKKLADNGKHTY-----------------LLDGDNVRHGLNGDLTF 74

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
               R++++     + +  +  G I++ 
Sbjct: 75  SDKDRVENIRRISELAKLFVDSGLIVIT 102


>gi|315039252|ref|YP_004032820.1| deoxyguanosine kinase [Lactobacillus amylovorus GRL 1112]
 gi|312277385|gb|ADQ60025.1| deoxyguanosine kinase [Lactobacillus amylovorus GRL 1112]
          Length = 228

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 47/230 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113
           +  A +     L+   + I+ AL +   +L DR +   +  +Q   D  +          
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTQDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYY 106

Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
              H  +D L  +  +   PD  + +++  D  +KR+Q R    E    D         +
Sbjct: 107 ELLHNMMDELDRMPKKN--PDLLVHINVSYDTMIKRIQKRGRPYEQLSYD---STLEDYY 161

Query: 171 EKRRQIFLDIARNQPDRCHI-VDSAH--------SFQSVATNILNIVWEL 211
           ++  + +            + +D             + V   I++ + E+
Sbjct: 162 KRLLRYYKPWYEKYDYSPKMEIDGDKYDFMSSEEDREIVLDQIVDKLKEV 211


>gi|308184402|ref|YP_003928535.1| adenylate kinase [Helicobacter pylori SJM180]
 gi|308060322|gb|ADO02218.1| adenylate kinase [Helicobacter pylori SJM180]
          Length = 191

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+     +I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILAAIKSSSKRIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V +     + R   R     D     +V+ H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +              I++   S + +   +   +   
Sbjct: 151 DPLVAIQNFYKAKHLHKIINGERSIEEIVNEMQEYILSF 189


>gi|302347928|ref|YP_003815566.1| cytidylate kinase, putative [Acidilobus saccharovorans 345-15]
 gi|302328340|gb|ADL18535.1| cytidylate kinase, putative [Acidilobus saccharovorans 345-15]
          Length = 185

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 66/217 (30%), Gaps = 56/217 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I   G  G+GK+T+   L   L  +            E  G    E  R       +D  
Sbjct: 12  IVVSGQPGSGKSTYARRLAAELGLRYYTTGQAFRSLAERMGVSLMELNRLAERDPSID-- 69

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                     A   + +          G +++     DS  A            L  L  
Sbjct: 70  ---------LAIDAESLNEA-----RRGCVVI-----DSHLA---------GWLLRDLA- 100

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIF--- 177
                   D TI +   +    +R+  R S  ES  L  FE  ++++   E+  + +   
Sbjct: 101 --------DVTIYVKASLPERTRRIALRDSKPESEAL--FEASQREISHWERFAKYYGID 150

Query: 178 -LDIARNQPDRCHIVDSAH-SFQSVATNILNIVWELV 212
             D++        +VD+     +     IL  V + +
Sbjct: 151 LRDLSSYD----LVVDTTRMGIEETYQVILTFVKKAL 183


>gi|298244572|ref|ZP_06968378.1| aminoglycoside phosphotransferase [Ktedonobacter racemifer DSM
           44963]
 gi|297552053|gb|EFH85918.1| aminoglycoside phosphotransferase [Ktedonobacter racemifer DSM
           44963]
          Length = 578

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 27/142 (19%)

Query: 15  AGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           +GK+T    L++ L    +  DV   +    +PA   A H         +  +       
Sbjct: 386 SGKSTLAHTLQQHLSFPLFSSDVIRKQLTRQSPAMHQAEHYGKGNYTPSWNRKT-----Y 440

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           AA   H      P L +G+ ++ D                +   L     +++       
Sbjct: 441 AALAQHA----LPYLEQGRSVILD---------ASFSRREERQVLAR-AAVALGA----K 482

Query: 133 TIILD--LPVDIGLKRVQNRYS 152
            + ++   P ++ L R+  R+ 
Sbjct: 483 VVFIECVCPPEVALARLHGRWQ 504


>gi|291284369|ref|YP_003501187.1| hypothetical protein G2583_3712 [Escherichia coli O55:H7 str.
           CB9615]
 gi|290764242|gb|ADD58203.1| Uncharacterized ATP-binding protein yghT [Escherichia coli O55:H7
           str. CB9615]
          Length = 144

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50
            I+  G +G+GK+T    L   +++      VH+           T+ P  G +      
Sbjct: 8   LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67

Query: 51  RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG 107
           R+ + +         A  I    AR       +      G I+L DR+       AY G
Sbjct: 68  RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDG 126


>gi|256842753|ref|ZP_05548241.1| excinuclease ABC, A subunit [Lactobacillus crispatus 125-2-CHN]
 gi|262045720|ref|ZP_06018684.1| excinuclease ABC, A subunit [Lactobacillus crispatus MV-3A-US]
 gi|256614173|gb|EEU19374.1| excinuclease ABC, A subunit [Lactobacillus crispatus 125-2-CHN]
 gi|260573679|gb|EEX30235.1| excinuclease ABC, A subunit [Lactobacillus crispatus MV-3A-US]
          Length = 946

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|251780114|ref|ZP_04823034.1| deoxyguanosIne kinase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084429|gb|EES50319.1| deoxyguanosIne kinase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 217

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 25/165 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+   + GAGK++   ++         DV         P       +  +   DE   
Sbjct: 1   MLITVGAMIGAGKSSLAKIIGEHF---GTDVFYES-VDDNPILP----LFYTASDDEIQK 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--------- 115
           +    +     L+     I+ AL+    +L DR +   + +         +         
Sbjct: 53  KRYPFLLQLWFLNTRFKSIKKALVNDNNVL-DRSIYEDWYFAKVNRDLGRISDLEFNIYE 111

Query: 116 -----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 L+ L E+  +   PD  I L    +  L R++ R    E
Sbjct: 112 ELLNNMLEELDELPKKA--PDLMIYLSGRFETILDRIRKRGRGYE 154


>gi|238853235|ref|ZP_04643620.1| excinuclease ABC subunit A [Lactobacillus gasseri 202-4]
 gi|238834119|gb|EEQ26371.1| excinuclease ABC subunit A [Lactobacillus gasseri 202-4]
          Length = 953

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T ++L LKR L +K
Sbjct: 629 GKFIVVTGVSGSGKSTLVNLILKRALAQK 657


>gi|157964240|ref|YP_001499064.1| Signal recognition particle protein [Rickettsia massiliae MTU5]
 gi|157844016|gb|ABV84517.1| Signal recognition particle protein [Rickettsia massiliae MTU5]
          Length = 452

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L+ +N  V +       PAA+    +L
Sbjct: 112 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 155


>gi|126330981|ref|XP_001366462.1| PREDICTED: similar to bifunctional ATP sulfurylase/adenosine
           5-phosphosulfate kinase [Monodelphis domestica]
          Length = 616

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 51  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 96

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 97  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 144

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 145 FFEVFVDAPLHVCEER 160


>gi|134294838|ref|YP_001118573.1| adenylylsulfate kinase [Burkholderia vietnamiensis G4]
 gi|134137995|gb|ABO53738.1| adenylylsulfate kinase [Burkholderia vietnamiensis G4]
          Length = 195

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 21/94 (22%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F+    G+ GAGK+T  SLLK  L    +                 R  LL       G 
Sbjct: 28  FVVWLTGVSGAGKSTLASLLKLQLDALGH-----------------RTYLLDGDTLREGL 70

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
             +     A R +++     V R     G I++ 
Sbjct: 71  NRDLGFSDADRRENIRRTAEVARLMTDAGFIVIA 104


>gi|116629945|ref|YP_815117.1| excinuclease ATPase subunit [Lactobacillus gasseri ATCC 33323]
 gi|311110422|ref|ZP_07711819.1| excinuclease ABC subunit A [Lactobacillus gasseri MV-22]
 gi|116095527|gb|ABJ60679.1| Excinuclease ABC subunit A [Lactobacillus gasseri ATCC 33323]
 gi|311065576|gb|EFQ45916.1| excinuclease ABC subunit A [Lactobacillus gasseri MV-22]
          Length = 953

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T ++L LKR L +K
Sbjct: 629 GKFIVVTGVSGSGKSTLVNLILKRALAQK 657


>gi|31242187|ref|XP_321524.1| AGAP001585-PA [Anopheles gambiae str. PEST]
 gi|28629060|gb|AAO49462.1|AF488801_1 multisubstrate deoxyribonucleoside kinase [Anopheles gambiae]
 gi|30173772|gb|EAA01224.2| AGAP001585-PA [Anopheles gambiae str. PEST]
          Length = 246

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 28/215 (13%)

Query: 3   SGL--FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----L 55
           SG   F  F EG  G+GKTT ++  ++F      D+ +  EP          ++L     
Sbjct: 12  SGKKPFTVFVEGNIGSGKTTFLNHFQKF-----NDICLLTEPVEKWRNCGGVNLLDLMYK 66

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYA----YQGER 109
                    +    +       H     +   +  + L   R  F++S  A    +QG  
Sbjct: 67  ESHRWAMPFQTYVTLTMLDM--HTCQTDKSVKLMERSLFSARNCFVESMLASGSLHQGMY 124

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +  Q  +      I +Q    D  + L    ++  +R++ R    ES     + ++   +
Sbjct: 125 NVLQEWYDFICCNIHIQA---DLIVYLQTSPEVVYERMKQRARSEESCVPLEYLKELHEL 181

Query: 170 HEK-RRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
           HE          A  +P    ++++     ++   
Sbjct: 182 HENWLIHG----ASPRPAPVLVLNADLDLNTIGAE 212


>gi|317010601|gb|ADU84348.1| guanylate kinase [Helicobacter pylori SouthAfrica7]
          Length = 206

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           L I   G  GAGK+T    L+  + +  + +   TR+P      +   +  +S    + G
Sbjct: 7   LLI-LSGPSGAGKSTLTKYLQEKIPKTYFSLSTTTRKPREGEI-DGLHYNFVSEEEFKQG 64

Query: 64  AEAEAIVFAAARLDHV----ENVIRPALMEGKILLCD 96
            E    +  A   +H     + ++  AL EGKI++ D
Sbjct: 65  IEKGQFLEWAIVHNHYYGTSKALVEKALKEGKIVIFD 101


>gi|329942884|ref|ZP_08291663.1| adenylate kinases family protein [Chlamydophila psittaci Cal10]
 gi|313848056|emb|CBY17054.1| adenylate kinase [Chlamydophila psittaci RD1]
 gi|328815144|gb|EGF85133.1| adenylate kinases family protein [Chlamydophila psittaci Cal10]
 gi|328914725|gb|AEB55558.1| Adenylate kinase [Chlamydophila psittaci 6BC]
          Length = 213

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 36/158 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHV 53
           M + +F    G  G+GK T    L   L+               +  P G  AAE     
Sbjct: 1   MLNNVFYIIMGPPGSGKGTQSQRLAHLLKLPHISSGELFRSAIESASPLGIKAAEYINQG 60

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            L      +G   EA+              +P    G I+             G   +  
Sbjct: 61  CLVPDEIVWGMVQEALN-------------QPECRSGCII------------DGFPRTLD 95

Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQNR 150
              L  L +  VQ    D   I LD+  +  ++R+ +R
Sbjct: 96  QAIL--LNDFFVQSHA-DYRVIQLDVSNEEIIRRIHSR 130


>gi|295692553|ref|YP_003601163.1| uvrABC system protein a [Lactobacillus crispatus ST1]
 gi|295030659|emb|CBL50138.1| UvrABC system protein A [Lactobacillus crispatus ST1]
          Length = 946

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|256848937|ref|ZP_05554371.1| excinuclease subunit A [Lactobacillus crispatus MV-1A-US]
 gi|312977727|ref|ZP_07789474.1| excinuclease ABC subunit A [Lactobacillus crispatus CTV-05]
 gi|256714476|gb|EEU29463.1| excinuclease subunit A [Lactobacillus crispatus MV-1A-US]
 gi|310895466|gb|EFQ44533.1| excinuclease ABC subunit A [Lactobacillus crispatus CTV-05]
          Length = 946

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|218457928|ref|ZP_03498019.1| ABC transporter ATP-binding protein [Rhizobium etli Kim 5]
          Length = 99

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLK 25
          MN   G FISF G  G GKTT + ++ 
Sbjct: 24 MNIEKGEFISFLGPSGCGKTTVLRMIA 50


>gi|187729898|ref|YP_001853792.1| putative conjugative transfer protein TraD [Vibrio tapetis]
 gi|182894457|gb|ACB99622.1| conjugative coupling factor TraD [Vibrio tapetis]
          Length = 701

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 5/125 (4%)

Query: 10  EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-GAEA 66
           +G  GAGK+  +  L  +++++     V  +     +   + ++  LL+   +     + 
Sbjct: 204 DGTTGAGKSVLLRKLLTWIRKRGDKAIVYDKGCTFTSKFFDPSQDTLLNPFDERCANWDV 263

Query: 67  EAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                 A   +++ N + P   EG    +   R + SS AYQ  +D         L  I 
Sbjct: 264 WCDAKDAPDFENIANALIPQHGEGDPFWVDSARTIFSSAAYQMSQDDKPCSTARLLSLIL 323

Query: 125 VQEVM 129
             E+ 
Sbjct: 324 TSELE 328


>gi|163783937|ref|ZP_02178907.1| Cytidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880788|gb|EDP74322.1| Cytidylate kinase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 167

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  GAGK+T   L+ + L 
Sbjct: 1  MIIAIDGPAGAGKSTIAKLIAQKLN 25


>gi|108799320|ref|YP_639517.1| shikimate kinase [Mycobacterium sp. MCS]
 gi|119868436|ref|YP_938388.1| shikimate kinase [Mycobacterium sp. KMS]
 gi|126434978|ref|YP_001070669.1| shikimate kinase [Mycobacterium sp. JLS]
 gi|108769739|gb|ABG08461.1| shikimate kinase [Mycobacterium sp. MCS]
 gi|119694525|gb|ABL91598.1| shikimate kinase [Mycobacterium sp. KMS]
 gi|126234778|gb|ABN98178.1| shikimate kinase [Mycobacterium sp. JLS]
          Length = 235

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 54/207 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L + L      +  T                    ++E      A +
Sbjct: 9   GLPGSGKSTIGRRLAKAL---GLTLLDT-----------------DAAIEETTGRTIADI 48

Query: 71  FAAA------RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           FA        R++  E VIR AL     +L            G    +     D+L   +
Sbjct: 49  FATDGEQEFRRIE--EEVIRSALQTHDGVLS----------LGGGAVTTPGVRDALAGHT 96

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
                    I L++    G++R          A  D  E+   ++  +   ++  +A   
Sbjct: 97  --------VIYLEISAAEGVRRTGGSTVRPLLAGPDRAEKYKALMDARVP-LYRRVATM- 146

Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWE 210
                 V++   +  +V  +I+  + +
Sbjct: 147 -----RVNTNRRNPGAVVRHIVARLEK 168


>gi|94984935|ref|YP_604299.1| dephospho-CoA kinase [Deinococcus geothermalis DSM 11300]
 gi|94555216|gb|ABF45130.1| dephospho-CoA kinase [Deinococcus geothermalis DSM 11300]
          Length = 219

 Score = 38.5 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 80/221 (36%), Gaps = 39/221 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVH--------VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           GAGK+T   L    L+ +   V         VTR+P      EAA   ++  GV +  A 
Sbjct: 19  GAGKSTVARL----LRARGLTVLDADEVAREVTRDPAVLAEIEAAFPGVVRGGVLDRAAL 74

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A A     ARL  +  +  P + +  + L           Q      +   +  +  +  
Sbjct: 75  AAAAFADPARLALLNAITHPRVRQKMLALE----------QAAAARGESWVVQDVPLLFE 124

Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             +    D  +++D P+D+ L RV  R  L     L    R+     +++R         
Sbjct: 125 GGLEAGMDAVLVVDAPLDLRLARVAARSGLTAEEVLARDARQMSAEEKRKRAT------- 177

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
                 ++D++    ++   +   +  L    V PL++ + 
Sbjct: 178 -----VVLDNSGDLANLERQVAAALDTL---GVWPLTASRS 210


>gi|319794879|ref|YP_004156519.1| hypothetical protein Varpa_4238 [Variovorax paradoxus EPS]
 gi|315597342|gb|ADU38408.1| hypothetical protein Varpa_4238 [Variovorax paradoxus EPS]
          Length = 161

 Score = 38.5 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 36/183 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T    L                P     +E A    L  G  E     + +  + 
Sbjct: 13  GAGKSTLTRRLADA-------------PATVLISEDAWLAALYPG--EIVDLPDYVRTST 57

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-SLQEISVQEVMPDC 132
                +   +   L  G  ++ D   +++ +    R   +   +   L            
Sbjct: 58  RLKQVMAEHVVALLAAGVSVVLDFPANTASSRAWARGIFEKAGVAHRLH----------- 106

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
              LD+P ++   R++ R +  E      FE  D       R     +A ++ +  H+V 
Sbjct: 107 --FLDVPDEVCKARLRARNASGEHP----FETTDAEFDLITRHF---VAPSEAEGFHVVH 157

Query: 193 SAH 195
           +A 
Sbjct: 158 AAQ 160


>gi|254699423|ref|ZP_05161251.1| polyamine ABC transporter, ATP-binding protein [Brucella suis bv. 5
           str. 513]
 gi|261749873|ref|ZP_05993582.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis
           bv. 5 str. 513]
 gi|261739626|gb|EEY27552.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis
           bv. 5 str. 513]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|227877199|ref|ZP_03995273.1| excision endonuclease subunit UvrA [Lactobacillus crispatus JV-V01]
 gi|227863253|gb|EEJ70698.1| excision endonuclease subunit UvrA [Lactobacillus crispatus JV-V01]
          Length = 962

 Score = 38.5 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 644 GKFIVVSGVSGSGKSTLVNMILKRALAQK 672


>gi|150026050|ref|YP_001296876.1| hypothetical protein FP2011 [Flavobacterium psychrophilum JIP02/86]
 gi|149772591|emb|CAL44074.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 177

 Score = 38.5 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 17/116 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64
           +   G  G GKTT I      L  K Y       P      E +R V+L    +      
Sbjct: 6   VVIIGGPGTGKTTII----DGLLSKGY----CCYP------EISREVILEAKKEGIEQLF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             + ++F+   L+  +     AL E   I+  DR +    AY      S   F D+
Sbjct: 52  LEKPLLFSELLLEGRKKQFENALAETHDIVFLDRGIPDILAYMHYIGDSYPSFFDA 107


>gi|90408036|ref|ZP_01216208.1| putative arsenical pump-driving ATPase(Arsenite-translocating
           ATPase) [Psychromonas sp. CNPT3]
 gi|90310880|gb|EAS38993.1| putative arsenical pump-driving ATPase(Arsenite-translocating
           ATPase) [Psychromonas sp. CNPT3]
          Length = 602

 Score = 38.5 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 9/67 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + L   L ++ ++VH+T        +      L +  V 
Sbjct: 348 MGKG---------GVGKTTIAAALACELAKRGHNVHLTTSDPAANLSATLHGTLENLEVT 398

Query: 61  EFGAEAE 67
               E E
Sbjct: 399 RIDPEIE 405


>gi|329117115|ref|ZP_08245832.1| excinuclease ABC, A subunit [Streptococcus parauberis NCFD 2020]
 gi|326907520|gb|EGE54434.1| excinuclease ABC, A subunit [Streptococcus parauberis NCFD 2020]
          Length = 943

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G FI+  G+ G+GK+T I       L + L R +      +   GT   E    +
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKALAQKLNRNSEKPGKYKSIEGTEHIERLIDI 688


>gi|318604573|emb|CBY26071.1| shikimate kinase III [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 174

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 66/213 (30%), Gaps = 46/213 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M   +F+   G  GAGKTT    L + L+ +  D     ++   +  AE    ++   G 
Sbjct: 1   MTQTIFMV--GARGAGKTTIGKALAQALEYRFIDTDLFMQQTLQSSVAE----IVAREGW 54

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           D F       +        V          G  +L     + ++  Q             
Sbjct: 55  DGFRLRESMAL------QTVTAPKTVVATGGGAVLS--HDNRTFMRQHG----------- 95

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIF 177
                         I L    ++  +R+       +   L       + + +   R   +
Sbjct: 96  ------------VVIYLRASANVLAERLAEDPEDAQRPSLTGKPIVEEMLDVLASREPFY 143

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            ++A       H++D+    + V   IL+I+ +
Sbjct: 144 QEVAH------HVLDATQPPEEVVEQILHILAD 170


>gi|307822906|ref|ZP_07653136.1| guanylate kinase [Methylobacter tundripaludum SV96]
 gi|307735681|gb|EFO06528.1| guanylate kinase [Methylobacter tundripaludum SV96]
          Length = 204

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 34/172 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTRE--PGGTPAAEAARHVLLSC 57
           MN G         GAGKT+ +  L   L      V H TR+  PG     +      +S 
Sbjct: 1   MNIGKLYIISAPSGAGKTSLVKQLVADLDDLTVSVSHTTRQMRPGEAHGQDY---YFVSV 57

Query: 58  GVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
              +   E +A +  A   D+     +  +   L +G  ++ +        +QG      
Sbjct: 58  ADFQAMQEQQAFLEHAQVFDNFYGTAQQTVEENLKQGLDVILE------IDWQGAEQ--- 108

Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                      +++++PD  +I + LP   ++ L+R++NR    E       
Sbjct: 109 -----------IKKLLPDSLSIFI-LPPSTEVLLQRLRNRGQDGEEIIARRM 148


>gi|307571144|emb|CAR84323.1| coaE [Listeria monocytogenes L99]
          Length = 219

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 78/216 (36%), Gaps = 32/216 (14%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60
           G+ G+   GK+T  +++++    L   +       EPG     E        +LL+ G  
Sbjct: 25  GLTGSVATGKSTVSNMIQQAGIPLVDADVAARKVVEPGTEGLKEIVAYFGGEILLADGTL 84

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E I     + + +  +  P + +  +   +RF  +    +        LF   L
Sbjct: 85  DRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFRAGE--ELVFFDIPLLFESHL 142

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179
           + +  Q V     +      +  LKR+  R +L +   L   E + + I EK R+  F  
Sbjct: 143 ESLVDQIV----VVW--TTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 193

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                     ++D+  S +     +   +   V+ +
Sbjct: 194 ----------VIDNNESLEKTQKQVYTFIERFVKNK 219


>gi|304392647|ref|ZP_07374587.1| cell division protein FtsY [Ahrensia sp. R2A130]
 gi|303295277|gb|EFL89637.1| cell division protein FtsY [Ahrensia sp. R2A130]
          Length = 585

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 20/156 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT I  L + L    +   +     G     AA   L   G       A   +
Sbjct: 384 GVNGSGKTTTIGKLSQKLYDAGFSTLLV---AGDTFRAAAIEQLKIWGDRTQSPVAFRDL 440

Query: 71  FAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQHLFLDSLQEIS----- 124
             A       +    AL EG+ + L D            R  ++   +D L++I      
Sbjct: 441 -GADSAGLAYDAYAKALDEGQDVMLMD---------TAGRLQNKTELMDELRKIIRVLKK 490

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                P  T++L L    G   +      +E A ++
Sbjct: 491 QDPTAPH-TVLLTLDATTGQNALSQVEIFKEVAGVN 525


>gi|258591367|emb|CBE67666.1| putative LAO/AO transport system ATPase, partial, 5' end [NC10
           bacterium 'Dutch sediment']
          Length = 287

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 10/96 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHV--LLSCG 58
           I   G  G+GK+T    L   L++++  V  V  +P     GG    +  R     L  G
Sbjct: 46  IGITGPPGSGKSTLADRLTEELRKRDKTVGIVAVDPTSPFTGGAILGDRIRMQSHSLDAG 105

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
           V          +   AR      ++      GK ++
Sbjct: 106 VFIRSMATRGHLGGLARA--TNEIVDVMDAAGKEVI 139


>gi|258653083|ref|YP_003202239.1| SARP family transcriptional regulator [Nakamurella multipartita DSM
           44233]
 gi|258556308|gb|ACV79250.1| transcriptional regulator, SARP family [Nakamurella multipartita
           DSM 44233]
          Length = 885

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 10/97 (10%)

Query: 8   SFEGIEGAGKTTHISL-LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
              G  G+GK++ +   L     R  + V +T  PG  P A      L +  +       
Sbjct: 295 VITGPSGSGKSSLVRAGLAARFARGGHPVVIT--PGADPLAAVGPEPLPAGELLVVDQAE 352

Query: 67  EAIVFAAA---RLDHVENVIRPALMEGKILL---CDR 97
           E          R   +  +IR     G +++    DR
Sbjct: 353 ELFTLTTDPDARSQFLARLIRHH-DRGPLVMVLRADR 388


>gi|149195097|ref|ZP_01872189.1| guanylate kinase [Caminibacter mediatlanticus TB-2]
 gi|149134810|gb|EDM23294.1| guanylate kinase [Caminibacter mediatlanticus TB-2]
          Length = 210

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 33/105 (31%), Gaps = 12/105 (11%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-----RE---PGGTPAAEAAR 51
           M   G  +   G  G+GKT+    +   L+   Y    T     RE    G      +  
Sbjct: 4   MKVKGSILVISGPSGSGKTSLAREVCNELKDLAYFSISTTTRSIREGERDGVDYFFVSKE 63

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
             L       F   AE            +  I  AL +GKI+  D
Sbjct: 64  EFLKDVEKGYFLEWAEVHGNFYGTS---KKQINEALNQGKIVFLD 105


>gi|126658515|ref|ZP_01729663.1| hypothetical protein CY0110_21360 [Cyanothece sp. CCY0110]
 gi|126620257|gb|EAZ90978.1| hypothetical protein CY0110_21360 [Cyanothece sp. CCY0110]
          Length = 510

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 29/154 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
           + G  I   G+ G+GKTT    L + +          R+  G  P  E     L S   +
Sbjct: 337 HQGKIILMSGLSGSGKTTIAKYLAQQINGILIRSDAVRKHIGNIPLDETGDSELYS---E 393

Query: 61  EFGAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           E   +  E +++       +  +I   + EG  ++ D                +H + ++
Sbjct: 394 EMNKKTYETLIY-------LGEII---VKEGFSVILD------------AKFDRHQWRET 431

Query: 120 LQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYS 152
           + EI+ +  +   TI     P++I   R+ NR  
Sbjct: 432 VIEIAKKNNI-SLTILYCHAPLEILSDRLSNRQG 464


>gi|148269869|ref|YP_001244329.1| ABC transporter related [Thermotoga petrophila RKU-1]
 gi|147735413|gb|ABQ46753.1| ABC transporter related [Thermotoga petrophila RKU-1]
          Length = 258

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
            G  I+  G  GAGK+T +  +   L+ +  ++ 
Sbjct: 25 RKGELIAILGPNGAGKSTLLKCVAGILKCQGVEIF 59


>gi|58221321|gb|AAW68303.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221323|gb|AAW68304.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221329|gb|AAW68307.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221331|gb|AAW68308.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221337|gb|AAW68311.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221341|gb|AAW68313.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|108937136|gb|ABG23380.1| putative signal recognition particle protein [Neisseria
           gonorrhoeae]
 gi|116582907|gb|ABK00076.1| regulatory protein [Neisseria gonorrhoeae]
 gi|116582909|gb|ABK00077.1| regulatory protein [Neisseria gonorrhoeae]
 gi|193735092|gb|ACF20055.1| regulatory protein [Neisseria gonorrhoeae]
 gi|193735100|gb|ACF20059.1| regulatory protein [Neisseria gonorrhoeae]
 gi|193735110|gb|ACF20064.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 140

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|326383219|ref|ZP_08204907.1| adenylate kinase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197969|gb|EGD55155.1| adenylate kinase [Gordonia neofelifaecis NRRL B-59395]
          Length = 182

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 63/218 (28%), Gaps = 53/218 (24%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVDE 61
              G  GAGK T   L+   L         T +        GTP    A+  L     + 
Sbjct: 4   VILGPPGAGKGTQAELMSEAL---GIPHISTGDLFRANISQGTPIGVEAKKYL--DAGNL 58

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHLFLD 118
              E    +         E V  P   +G   + D F  S+    A +G  D        
Sbjct: 59  VPPEITINMV-------RERVAEPDASKGF--ILDGFPRSTEQAVALEGILDDLSTKL-- 107

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-----FERKDVMIHEKR 173
                       D  +   +  D+ ++R+  R    ++  +       ++ +        
Sbjct: 108 ------------DGVLSFKVDTDVVVERMLARGRADDTEEVIRNRMAVYDAETAP----- 150

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                 +  +  D+   +D+  S   V   +L  + + 
Sbjct: 151 ------LLDHYADQVTEIDAVGSVDEVHQRVLRALGKA 182


>gi|269123700|ref|YP_003306277.1| cytidylate kinase [Streptobacillus moniliformis DSM 12112]
 gi|268315026|gb|ACZ01400.1| cytidylate kinase [Streptobacillus moniliformis DSM 12112]
          Length = 213

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  G+GK+T    + + L
Sbjct: 1  MIIAIDGPSGSGKSTVAKKIAQKL 24


>gi|261250005|ref|ZP_05942582.1| signal recognition particle receptor protein FtsY [Vibrio
           orientalis CIP 102891]
 gi|260939509|gb|EEX95494.1| signal recognition particle receptor protein FtsY [Vibrio
           orientalis CIP 102891]
          Length = 406

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 209 GVNGVGKTTTIGKLAKQFQAQGKSVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 264

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A  +G  +++ D
Sbjct: 265 TGADSASVIYDAIESAKAKGVDVVIAD 291


>gi|255319697|ref|ZP_05360905.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens
           SK82]
 gi|262380021|ref|ZP_06073176.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens
           SH164]
 gi|255303226|gb|EET82435.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens
           SK82]
 gi|262298215|gb|EEY86129.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens
           SH164]
          Length = 473

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 68/226 (30%), Gaps = 56/226 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG++ AGK   I  + + L  + Y ++    P         R   L    ++     
Sbjct: 283 IVFEGMDAAGKGGAIKRIVKKLDPREYTIYSIAAPEKYE----LRRPYLWRFWNKLDEHE 338

Query: 67  EAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           + ++F   R  +   +   I       +            AY            D +   
Sbjct: 339 DIMIF--DRSWYGRVLVERIEGFAKPAEW---------QRAY------------DEINRF 375

Query: 124 SVQEVMPDCT--------IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR- 174
                  D T          L +  D   KR Q R           F+  D     + + 
Sbjct: 376 EK-----DLTDSQTLVIKFWLAISKDEQAKRFQARADTPHK----RFKITDEDWRNREKW 426

Query: 175 QIFLDIARNQPDR-------CHIVDSAHSFQSVATNILNIVWELVQ 213
             +L  A +  +R         ++ + ++ ++    +L  + + +Q
Sbjct: 427 DEYLKAAADMFERTSPAWAPWQVI-ATNNKEAARIQVLEGILKKLQ 471


>gi|227821186|ref|YP_002825156.1| adenylate kinase [Sinorhizobium fredii NGR234]
 gi|227340185|gb|ACP24403.1| adenylate kinase [Sinorhizobium fredii NGR234]
          Length = 194

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 37/214 (17%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK T    L      ++YD+            +  R  + +       A+  
Sbjct: 5   VLLGPPGAGKGTQAERLV-----RDYDLLHIS------TGDLLRDAIKAQSPLGRKAK-- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDR-----FLDSSYAYQGERDSSQHLFLDSLQE 122
               A      V + +   L+E +  L D+     F+   +     +  +    L+S+Q 
Sbjct: 52  ---MAVDEGKLVPDEVVVGLVEER--LTDKEPGQGFILDGFPRTIAQAGALERLLESMQ- 105

Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 +P D  I+ D+P+ +  +R+  R     SA           + +KR + F    
Sbjct: 106 ------VPLDHVILFDIPIRLLEERIAKRAEQTRSAGAQPRTDDSPEVLKKRIEEFARAT 159

Query: 182 R------NQPDRCHIVDSAHSFQSVATNILNIVW 209
                   Q      VD++   + VAT I + + 
Sbjct: 160 AALSPFYEQNGLLRRVDASEDIERVATQIRDFLQ 193


>gi|221059752|ref|XP_002260521.1| XPA binding protein 1 [Plasmodium knowlesi strain H]
 gi|193810595|emb|CAQ42493.1| XPA binding protein 1, putative [Plasmodium knowlesi strain H]
          Length = 495

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 13/102 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54
           I   G+ G+GKTT++  L  +L+ +             V   + P      ++ +   ++
Sbjct: 205 IVI-GMAGSGKTTYVGSLYNYLKVEKKKKVYTMNLDPAVKYLQYPVNIDIRDSIKYHEIM 263

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   GA    +   A R D V  ++     +   ++ D
Sbjct: 264 KEYKLGPNGAIMTCLNLFATRFDKVIEILEKRKKKLHYIIVD 305


>gi|190150618|ref|YP_001969143.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|303250620|ref|ZP_07336817.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|307263964|ref|ZP_07545566.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|226741844|sp|B3H271|KAD_ACTP7 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|189915749|gb|ACE62001.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|302650608|gb|EFL80767.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306870698|gb|EFN02440.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 214

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 55/234 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +             T         +  R  +      E G +A
Sbjct: 3   IILLGAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +A++        V + +  AL++ +I   D    + +   G   +      D+L++    
Sbjct: 50  KALM---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---S 99

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166
            V  D  +  D+  ++ ++R+  R                       +    D   R+D 
Sbjct: 100 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDD 159

Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                     + H++ +     +   A     R   +D     + V+  +  I+
Sbjct: 160 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 213


>gi|184156011|ref|YP_001844351.1| deoxyguanosine kinase [Lactobacillus fermentum IFO 3956]
 gi|227515462|ref|ZP_03945511.1| deoxyguanosine kinase [Lactobacillus fermentum ATCC 14931]
 gi|260662733|ref|ZP_05863627.1| deoxyguanosine kinase [Lactobacillus fermentum 28-3-CHN]
 gi|183227355|dbj|BAG27871.1| deoxyguanosine kinase [Lactobacillus fermentum IFO 3956]
 gi|227086176|gb|EEI21488.1| deoxyguanosine kinase [Lactobacillus fermentum ATCC 14931]
 gi|260552814|gb|EEX25813.1| deoxyguanosine kinase [Lactobacillus fermentum 28-3-CHN]
          Length = 213

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 69/233 (29%), Gaps = 44/233 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+   +L   L  K         P      +     L      ++G   
Sbjct: 2   IVLAGTIGAGKTSLTQMLADHLGSK---------PFFESVDDNPILPLFYKDPQKYGFLL 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----------------AYQGE 108
           +   F   RLD +++     L      + DR  F D+                   Y   
Sbjct: 53  QIY-FLNRRLDEIKDSFDNDLN-----VLDRSIFEDALMFKMNADLGRATHTEADIYTSL 106

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
             +      D   + +     P+  I + +  +  L R++ R    E    D        
Sbjct: 107 LGNMMEELPDQAHQKA-----PNLLIHIRVSFETMLNRIKQRGRSFEQIENDP---SLYQ 158

Query: 169 IHEKRRQIFLDIARNQPDRCH-IVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219
            ++   Q +             ++D    +  VA      +V E +  ++S L
Sbjct: 159 YYKTLNQRYQSWYEAYDKSPKMMIDGDQ-YDFVADPQAAKVVLEQIDSKLSAL 210


>gi|166220145|sp|Q4A6Q8|KCY_MYCS5 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|144574978|gb|AAZ43563.2| cytidylate kinase [Mycoplasma synoviae 53]
          Length = 218

 Score = 38.5 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 80/226 (35%), Gaps = 37/226 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDEF 62
           I+ +G  G GK+T   L+ + L         T    G+     A HV+ +        + 
Sbjct: 7   IAIDGPSGVGKSTVSKLIAKKLN-------YTFINSGSIYRTIAYHVIKNDIDINNEKDV 59

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD---------R-FLDSSYAYQGER 109
            +  +++ F+ ++ + +      I   L   +I +           R F+ S    Q   
Sbjct: 60  ISSLDSLEFSLSKNEELFYKGENITLILRSEQISISTPVVSKIPEVREFVTSYI--QKMT 117

Query: 110 DSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDI-GLKRVQNRYSLRESACLDY--FER 164
              +   +D     +  +VMP  D  I L    +    +RV   + L  ++  D   +E 
Sbjct: 118 KGKKGFIIDG--RDTTFKVMPHADVKIFLWATAEERAQRRVDQNHQLGYNSNYDEVLYEI 175

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVW 209
           K     +  R+   D      D   ++D  +     V   I++++ 
Sbjct: 176 KKRDHQDMNRE--HDPLHKTEDSI-LIDCTNMKIDEVVNKIISLIK 218


>gi|195579814|ref|XP_002079754.1| GD21850 [Drosophila simulans]
 gi|194191763|gb|EDX05339.1| GD21850 [Drosophila simulans]
          Length = 4107

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 24/117 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G GK+T ISLLK+ L      VH       +      R   L     ++    
Sbjct: 1948 VVLVGPPGCGKSTIISLLKQALCGNQLKVHTISPKSMSRIQLLGR---LDADTRQWQDG- 2003

Query: 67   EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +   A     V     P+      ++CD              S    ++++L  +
Sbjct: 2004 -VLTHTA-----VAVNQEPS-QVHSWIVCD-------------GSIDPEWIEALNSV 2040


>gi|118355130|ref|XP_001010826.1| hypothetical protein TTHERM_00122300 [Tetrahymena thermophila]
 gi|89292593|gb|EAR90581.1| hypothetical protein TTHERM_00122300 [Tetrahymena thermophila
           SB210]
          Length = 352

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 3/102 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDEFG 63
           I+  G    GKT+ ++ L    ++  + V +T E     A   A     +L    V++F 
Sbjct: 7   IALTGGPCGGKTSAMNYLHSQFKKWGFTVFMTPEAFTVTAQGHAHELYGILKQQDVNDFC 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
                I       +     +     +  IL CDR +  + AY
Sbjct: 67  KLGAKITNLCYFFEEYFEDLAKLSKKPTILFCDRGICDTKAY 108


>gi|83720017|ref|YP_441859.1| deoxynucleoside kinase family protein [Burkholderia thailandensis
           E264]
 gi|83653842|gb|ABC37905.1| deoxynucleoside kinase family protein [Burkholderia thailandensis
           E264]
          Length = 241

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 47/179 (26%), Gaps = 51/179 (28%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +++ EG  G GKTT  +LL      +     +   P   P  E                
Sbjct: 32  RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 84

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +    +  A + +     I  A      ++ D                   F+    EI 
Sbjct: 85  Q----LAFALQRERQAGEIAAAYEANMPIVAD-------------------FMPQKNEIF 121

Query: 125 VQEVMPD---------------------CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            +  +PD                       + L    ++   R+Q R    E    D +
Sbjct: 122 ARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 180


>gi|89896557|ref|YP_520044.1| hypothetical protein DSY3811 [Desulfitobacterium hafniense Y51]
 gi|89336005|dbj|BAE85600.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 617

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           I+  G  GAGKTT I+LL RF +    ++ +     GTP ++  R 
Sbjct: 407 IAIVGPTGAGKTTIINLLMRFYELDGGEILI----DGTPISQVHRE 448


>gi|116754798|ref|YP_843916.1| adenylate kinases [Methanosaeta thermophila PT]
 gi|121693062|sp|A0B9A2|KAD_METTP RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|116666249|gb|ABK15276.1| Adenylate kinase [Methanosaeta thermophila PT]
          Length = 215

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 41/156 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T   ++      K+               +  R  + +    E G EA
Sbjct: 3   IVLLGPPGSGKGTQAKMIAEKFNVKHI-----------STGDILREHVRNG--TELGKEA 49

Query: 67  EAIVFAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  +        V +     +I+  L +  +          Y   G   +          
Sbjct: 50  KKYM---DAGQLVPDSILIGIIKDRLSKPDV-------AGGYMLDGYPRTIPQAE----- 94

Query: 122 EISVQEVMP------DCTIILDLPVDIGLKRVQNRY 151
             ++ +++P      D  + +D+P +  ++R+  R 
Sbjct: 95  --ALDKILPELKQKIDVVLNIDVPDEELVRRLSGRR 128


>gi|116754349|ref|YP_843467.1| adenylylsulfate kinase [Methanosaeta thermophila PT]
 gi|116665800|gb|ABK14827.1| adenylylsulfate kinase [Methanosaeta thermophila PT]
          Length = 178

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 30/144 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G GKTT     K  L R    V +          +  R V+       +  E   
Sbjct: 7   FTGLPGCGKTTIARRTKEHLSRMGVKVKILE-------LDEIRRVV--TPNPRYTDEERD 57

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           IV+A+     +  + +     G  ++ D            R   + L    ++  +    
Sbjct: 58  IVYAS-----LAYMAKLLCDAGVNVIID--------ATANRRRYRDLARKLVERFAE--- 101

Query: 129 MPDCTIILDLPVDIGLKRVQNRYS 152
                + +  P+D+ ++R   R +
Sbjct: 102 -----VYIKAPLDVCMEREALRKA 120


>gi|328464201|gb|EGF35655.1| cobalt transport ATP-binding protein [Lactobacillus helveticus
          MTCC 5463]
          Length = 554

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          G FI   G  G+GKTT ++ LK+ L  K 
Sbjct: 32 GDFIVIAGNTGSGKTTLLNHLKKELMPKG 60


>gi|324327229|gb|ADY22489.1| cobalt ABC transporter, ATP-binding protein [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 551

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 28/87 (32%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI   G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|309789896|ref|ZP_07684473.1| cytidylate kinase [Oscillochloris trichoides DG6]
 gi|308228028|gb|EFO81679.1| cytidylate kinase [Oscillochloris trichoides DG6]
          Length = 222

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   L I+ +G  GAGK+T  +LL   L
Sbjct: 1  MQQPLVITIDGPAGAGKSTLGALLAERL 28


>gi|298291459|ref|YP_003693398.1| adenylate kinase [Starkeya novella DSM 506]
 gi|296927970|gb|ADH88779.1| adenylate kinase [Starkeya novella DSM 506]
          Length = 194

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 65/212 (30%), Gaps = 39/212 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L     R       T         +  R  + +       A+A    
Sbjct: 7   GPPGAGKGTQAQRLVA---RHGIVQLST--------GDMLREAVRNGTPVGLRAKA---- 51

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI-SVQE 127
                   V + I         ++ DR    D S  +  +         ++L  I + + 
Sbjct: 52  -VMDAGQLVSDDIVIG------IISDRIDQPDCSKGFILDGFPRTVAQAEALDSILAEKG 104

Query: 128 VMPDCTIILDLP----VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179
           +  D  I L +     VD  L+R +   +  E    D     D ++ + R + +      
Sbjct: 105 LKLDAVIELKVDQAKLVDRILQRARETAARGEPVRKD----DDPVVFKTRLEAYNRDTAV 160

Query: 180 IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209
           +A    +R     +D       V   I +++ 
Sbjct: 161 VAPYYAERGLLVAIDGMRPIDEVTQAISDVLE 192


>gi|317052568|ref|YP_004113684.1| guanylate kinase [Desulfurispirillum indicum S5]
 gi|316947652|gb|ADU67128.1| guanylate kinase [Desulfurispirillum indicum S5]
          Length = 212

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 41/231 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
           SG  +      GAGKTT   +L +   +    + H TRE             +       
Sbjct: 6   SGNILVLTAPSGAGKTTLSRMLVQRYPQCQLSISHTTREARPGEVNGRDYFFVELDEFLS 65

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              E + + +A    ++       +  A+ +G  +L D        YQG           
Sbjct: 66  MIQEGKFLEYATVHGNYYGTSFQYLYQAMEQGMNVLLD------IDYQGA---------- 109

Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                 +++ MP+  ++  LP   +   +R+ +R    +       +  +  I +     
Sbjct: 110 ----FQLKKKMPEAILVFILPPSLEDLRERLTSRGRDDDEVVKLRLQNAEEEILQ--YSH 163

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKRVSPLSSKKDI 225
           F            +V+     +     + +I+   EL + R  PLS   DI
Sbjct: 164 FD---------YVVVN--EDLEQAYEQLASILTAEELRKNRRRPLSELADI 203


>gi|227524163|ref|ZP_03954212.1| ABC superfamily ATP binding cassette transporter ATPase
          [Lactobacillus hilgardii ATCC 8290]
 gi|227088671|gb|EEI23983.1| ABC superfamily ATP binding cassette transporter ATPase
          [Lactobacillus hilgardii ATCC 8290]
          Length = 554

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          G FI   G  G+GKTT ++ LKR L  K 
Sbjct: 32 GDFIVIAGNTGSGKTTLLNHLKRELMPKG 60


>gi|289581353|ref|YP_003479819.1| hypothetical protein Nmag_1681 [Natrialba magadii ATCC 43099]
 gi|289530906|gb|ADD05257.1| conserved hypothetical protein [Natrialba magadii ATCC 43099]
          Length = 166

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 43/208 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+    I + G+ G GK+         +  + Y              +  R  L      
Sbjct: 1   MSRATLIVYCGLPGVGKSAASGYTAEQIDAERYR------------TDQVRKQLF-PDPS 47

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E +      A  D +    + AL  G  ++ D        +Q      Q   +   
Sbjct: 48  YTPEETD------ATYDALLECAQSALESGSNVVLD------ATFQSRPHREQATAMADE 95

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  +       + +D  +D+  +R++ R      A    FE+     H + R+ F  I
Sbjct: 96  TGVDCEF------VYVDCNLDVVKERIEERTDTISDAQ---FEQ-----HLQLRETFDSI 141

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
            R+      +VD++ + +     I   V
Sbjct: 142 ERDH----VVVDNSGTLEETYRQIDEHV 165


>gi|229586415|ref|YP_002844916.1| Signal recognition particle protein [Rickettsia africae ESF-5]
 gi|228021465|gb|ACP53173.1| Signal recognition particle protein [Rickettsia africae ESF-5]
          Length = 449

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|147677112|ref|YP_001211327.1| ABC-type multidrug transport system, ATPase component
           [Pelotomaculum thermopropionicum SI]
 gi|146273209|dbj|BAF58958.1| ABC-type multidrug transport system, ATPase component
           [Pelotomaculum thermopropionicum SI]
          Length = 323

 Score = 38.5 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 31/203 (15%)

Query: 9   FEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           F G  GAGK+T I +L   L       +   YDV                 V     +D 
Sbjct: 34  FLGPNGAGKSTTIKILSTLLKPTSGKAELAGYDVVAHPNEVRRSIG----MVFQDPSLDN 89

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEG-KIL-LCDRFLDSSYAYQGERDSSQHLFLDS 119
                E ++F A   +   N+IRP + +  +I+ L DR    S          + L    
Sbjct: 90  RLTAEENLLFHAMLYNVPANLIRPRIDQVLEIVDLADR--RRSLVKTFSGGMKRRL---- 143

Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             EI+   +  P   + LD     GL   Q R ++ E       E   + +       ++
Sbjct: 144 --EIARGLLHRP-KVLFLD-EPTAGLD-PQTRNAIWEHVRKLRDE-TGITVFMTTH--YM 195

Query: 179 DIARNQPDRCHIVD--SAHSFQS 199
           D A N  DR  ++D  +  +  S
Sbjct: 196 DEAENC-DRIAVIDHGAIQAIDS 217


>gi|315647646|ref|ZP_07900748.1| phosphonates transport system [Paenibacillus vortex V453]
 gi|315277085|gb|EFU40426.1| phosphonates transport system [Paenibacillus vortex V453]
          Length = 208

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          +  G F+   G  GAGK+T +  L R ++  N  +    E       +  R +    G+
Sbjct: 27 IRPGEFVVVIGPSGAGKSTLLRSLNRMIEPTNGKIRFKGEETMGIKGKKLREMRRHMGM 85


>gi|307310380|ref|ZP_07590028.1| uncharacterized ATP-binding protein YghS [Escherichia coli W]
 gi|306909275|gb|EFN39770.1| uncharacterized ATP-binding protein YghS [Escherichia coli W]
 gi|315062304|gb|ADT76631.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli W]
 gi|323377111|gb|ADX49379.1| uncharacterized ATP-binding protein YghS [Escherichia coli KO11]
          Length = 232

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 67/246 (27%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225

Query: 207 IVWELV 212
            +   +
Sbjct: 226 AIHAAL 231


>gi|293383928|ref|ZP_06629829.1| putative kinase [Enterococcus faecalis R712]
 gi|293387444|ref|ZP_06631998.1| putative kinase [Enterococcus faecalis S613]
 gi|312908041|ref|ZP_07767023.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
 gi|312910799|ref|ZP_07769636.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
 gi|291078688|gb|EFE16052.1| putative kinase [Enterococcus faecalis R712]
 gi|291083166|gb|EFE20129.1| putative kinase [Enterococcus faecalis S613]
 gi|310625929|gb|EFQ09212.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
 gi|311288943|gb|EFQ67499.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
          Length = 188

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    +    
Sbjct: 28  KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVKDETGNI 77

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                          + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 78  SIALF----------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151


>gi|281412249|ref|YP_003346328.1| ABC transporter related protein [Thermotoga naphthophila RKU-10]
 gi|281373352|gb|ADA66914.1| ABC transporter related protein [Thermotoga naphthophila RKU-10]
          Length = 258

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
            G  I+  G  GAGK+T +  +   L+ +  ++ 
Sbjct: 25 RKGELIAILGPNGAGKSTLLKCVAGILKCQGVEIF 59


>gi|225010463|ref|ZP_03700934.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-3C]
 gi|225005292|gb|EEG43243.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-3C]
          Length = 204

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 30/188 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   LL +                     E   +  L    ++   E  +     
Sbjct: 10  GAGKTTLTQLLSKH------------YNWDAHFEEVEDNPYLDDFYNQM--ERWSFNLQI 55

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEISVQ 126
             L+     I      GK ++ DR  + D+     +    G   +        L E+  +
Sbjct: 56  FFLNSRYRQILEIRESGKNIIQDRTIYEDAFIFAPNLHAMGLMTNRDFNNYKQLFELMEK 115

Query: 127 EVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            V  P+  I L   V   + ++Q R    E+          +    +  + +   A    
Sbjct: 116 LVQPPELVIYLRSSVPNLVSQIQKRGREYENTI-------SIDYLSRLNERYEAWAHGYT 168

Query: 186 D-RCHIVD 192
           + +  ++D
Sbjct: 169 NSKLLVID 176


>gi|210134357|ref|YP_002300796.1| shikimate kinase [Helicobacter pylori P12]
 gi|238058101|sp|B6JPQ5|AROK_HELP2 RecName: Full=Shikimate kinase; Short=SK
 gi|210132325|gb|ACJ07316.1| shikimic acid kinase I [Helicobacter pylori P12]
          Length = 162

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|190409797|gb|EDV13062.1| uridylate kinase [Saccharomyces cerevisiae RM11-1a]
 gi|207343455|gb|EDZ70909.1| YKL024Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 204

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 61/215 (28%), Gaps = 46/215 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L +      L      +   +   G+   E  ++ +      +   +
Sbjct: 23  GGPGAGKGTQCEKLVKDYSFVHLSA-GDLLRAEQGRAGSQYGELIKNCIKEG---QIVPQ 78

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSS-YAYQGERDSSQHLFLDSLQEI 123
              +         + N I   +   K   L D F      A   ERD  +  F+      
Sbjct: 79  EITL-------ALLRNAISDNIKANKHKFLIDGFPRKMDQAISFERDIVESKFI------ 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH------EKRRQIF 177
                     +  D P DI L+R+  R         D  E      +          + F
Sbjct: 126 ----------LFFDCPEDIMLERLLERGKT-SGRSDDNIESIKKRFYTFKETSMPVIEYF 174

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                    +   V    S + V  ++ + + + +
Sbjct: 175 ET-----KSKVVRVRCDRSVEDVYKDVQDAIRDRL 204


>gi|170683870|ref|YP_001746672.1| D-gluconate kinase [Escherichia coli SMS-3-5]
 gi|170521588|gb|ACB19766.1| thermosensitive gluconokinase [Escherichia coli SMS-3-5]
          Length = 187

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQDRI 174


>gi|163783395|ref|ZP_02178387.1| putative ATP/GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881317|gb|EDP74829.1| putative ATP/GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1]
          Length = 1181

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I+  G  G+GK+T + LL + L  KN ++ +          +  R   L   +  
Sbjct: 48  KGGKAIALIGPWGSGKSTVVKLLDKEL-DKNKNITLFIFDAWGHHGDPLRRSFLKQLIRH 106

Query: 62  FGAEAEA 68
              +A  
Sbjct: 107 LKGKAWL 113


>gi|51518070|ref|YP_067998.1| BXLF1 [Macacine herpesvirus 4]
 gi|18025521|gb|AAK95465.1| BXLF1 [Macacine herpesvirus 4]
          Length = 607

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 63/194 (32%), Gaps = 32/194 (16%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC------GVD 60
            EG  G GKTT ++ LK           V  EP    T   E A   +         G +
Sbjct: 289 LEGAPGVGKTTMLNHLKAVF---GDLTIVVPEPMRYWTHVYENAIKAMHKNVTRARQGRE 345

Query: 61  EFGAEAEAIVF--------AAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQ--G 107
           +  AE  A            A+R   +   E+  RP       +L DR L S+       
Sbjct: 346 DTSAEVLACQMKFTTPFRVLASRKRSLLSTESGARPVAPLDCWILHDRHLLSASVVFPLM 405

Query: 108 ERDSSQHLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                   + D +Q ++     P D  + + L  +  L+R++ R    ES         D
Sbjct: 406 LLRGQLLSYSDFIQILATFTADPGDTIVWMKLNGEENLRRLKKRGRKHESGP-------D 458

Query: 167 VMIHEKRRQIFLDI 180
               +     +  +
Sbjct: 459 AGYLKSVNDAYHAV 472


>gi|327469234|gb|EGF14706.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Streptococcus sanguinis SK330]
          Length = 247

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          + G FIS  GI G+GKTT +  +   L+  +  V + R
Sbjct: 36 SRGEFISILGISGSGKTTLLKCISSLLKPTSGKVMLNR 73


>gi|296284886|ref|ZP_06862884.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Citromicrobium bathyomarinum JL354]
          Length = 642

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 38/143 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + +++ L   N                     LL       G   + 
Sbjct: 477 FTGLSGSGKSTIANAVEKKLALMNRHTF-----------------LLDGDNVRHGLNKDL 519

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QEI 123
               A R++++     V +     G I+L         A+     + + +  D L   E 
Sbjct: 520 GFTEADRIENIRRIGEVAKLMADAGLIVLT--------AFISPFRAERKMVRDMLPEGEF 571

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
                     I +D P+++  +R
Sbjct: 572 VE--------IFVDTPLEVAEER 586


>gi|295706525|ref|YP_003599600.1| LAO/AO transport system ATPase [Bacillus megaterium DSM 319]
 gi|294804184|gb|ADF41250.1| LAO/AO transport system ATPase [Bacillus megaterium DSM 319]
          Length = 331

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I F G+ GAGK+T I     +L +  + V  +  +P     GG+   +  R  LL+   +
Sbjct: 56  IGFTGVPGAGKSTLIDKFGSYLCKNGHSVAVLAVDPSSTLSGGSILGDKTRMELLTKQEN 115

Query: 61  EF 62
            F
Sbjct: 116 AF 117


>gi|294501178|ref|YP_003564878.1| LAO/AO transport system ATPase [Bacillus megaterium QM B1551]
 gi|294351115|gb|ADE71444.1| LAO/AO transport system ATPase [Bacillus megaterium QM B1551]
          Length = 331

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I F G+ GAGK+T I     +L +  + V  +  +P     GG+   +  R  LL+   +
Sbjct: 56  IGFTGVPGAGKSTLIDKFGSYLCKNGHSVAVLAVDPSSTLSGGSILGDKTRMELLTKQEN 115

Query: 61  EF 62
            F
Sbjct: 116 AF 117


>gi|317128560|ref|YP_004094842.1| cytidylate kinase [Bacillus cellulosilyticus DSM 2522]
 gi|315473508|gb|ADU30111.1| cytidylate kinase [Bacillus cellulosilyticus DSM 2522]
          Length = 228

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 9/75 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---------REPGGTPAAEAARHVLLSC 57
          I+ +G  GAGK+T   ++   L     D             +E       E    +L   
Sbjct: 7  IAIDGPAGAGKSTVAKMVAEKLSFIYIDTGAMYRALTYEALKENVEISNGEKLIDLLKKT 66

Query: 58 GVDEFGAEAEAIVFA 72
           ++      + ++  
Sbjct: 67 SIELINKSGKQLIML 81


>gi|269215385|ref|ZP_06159239.1| cytidylate kinase [Slackia exigua ATCC 700122]
 gi|269130872|gb|EEZ61947.1| cytidylate kinase [Slackia exigua ATCC 700122]
          Length = 226

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  GAGK+T    + + L
Sbjct: 1  MIIAIDGPSGAGKSTVAKAVAKRL 24


>gi|255646419|gb|ACU23688.1| unknown [Glycine max]
          Length = 296

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 38/150 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  K                +  R         +
Sbjct: 117 QKGCVIWLTGLSGSGKSTLACALSRSLHSKGK-------LTYILDGDNIR----HGLNRD 165

Query: 62  FGAEAEAIVFAAARLDHVENVIRP-ALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119
               AE       R +++  +     L+    ++C   + S  + Y+ +RD         
Sbjct: 166 LSFRAE------DRSENIRRIGEVSKLLADAGVIC---IASLISPYRKDRD--------- 207

Query: 120 LQEISVQEVMP--DCT-IILDLPVDIGLKR 146
               + + ++P  D   + +D+P+D+   R
Sbjct: 208 ----ACRALLPEGDFIEVFIDVPLDVCEAR 233


>gi|313127491|ref|YP_004037761.1| ATPase, pilt family [Halogeometricum borinquense DSM 11551]
 gi|312293856|gb|ADQ68316.1| ATPase, PilT family [Halogeometricum borinquense DSM 11551]
          Length = 615

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
             G+ IS  G  GAGK+T    +  FL   +Y V    +P         
Sbjct: 259 QRGVLIS--GSPGAGKSTFAQAVAEFLNESDYAVKTMEKPRDLQVGPEI 305


>gi|225466557|ref|XP_002271740.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 154

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 28/145 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  +                +  R         +
Sbjct: 23  QKGCVIWITGLSGSGKSTLACALSRALHSRG-------NLTYVLDGDNVR----HGLNRD 71

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               AE       R +++  +   A +         F DS         S      D+ +
Sbjct: 72  LSFRAE------DRAENIRRIGEVAKL---------FSDSGIICIASLISPYRKDRDACR 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
            +  +       + +D+P+++  +R
Sbjct: 117 AMLSEGNF--IEVFMDIPLEVCEER 139


>gi|71894166|ref|YP_278274.1| cytidylate kinase [Mycoplasma synoviae 53]
          Length = 220

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 80/226 (35%), Gaps = 37/226 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDEF 62
           I+ +G  G GK+T   L+ + L         T    G+     A HV+ +        + 
Sbjct: 9   IAIDGPSGVGKSTVSKLIAKKLN-------YTFINSGSIYRTIAYHVIKNDIDINNEKDV 61

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD---------R-FLDSSYAYQGER 109
            +  +++ F+ ++ + +      I   L   +I +           R F+ S    Q   
Sbjct: 62  ISSLDSLEFSLSKNEELFYKGENITLILRSEQISISTPVVSKIPEVREFVTSYI--QKMT 119

Query: 110 DSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDI-GLKRVQNRYSLRESACLDY--FER 164
              +   +D     +  +VMP  D  I L    +    +RV   + L  ++  D   +E 
Sbjct: 120 KGKKGFIIDG--RDTTFKVMPHADVKIFLWATAEERAQRRVDQNHQLGYNSNYDEVLYEI 177

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVW 209
           K     +  R+   D      D   ++D  +     V   I++++ 
Sbjct: 178 KKRDHQDMNRE--HDPLHKTEDSI-LIDCTNMKIDEVVNKIISLIK 220


>gi|77461558|ref|YP_351065.1| signal recognition particle-docking protein FtsY [Pseudomonas
           fluorescens Pf0-1]
 gi|77385561|gb|ABA77074.1| cell division protein [Pseudomonas fluorescens Pf0-1]
          Length = 515

 Score = 38.5 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 316 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 371

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 372 TGADSASVIFDAVQAAKARGIDVLIAD 398


>gi|330812382|ref|YP_004356844.1| putative signal recognition particle receptor [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380490|gb|AEA71840.1| putative signal recognition particle receptor [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 477

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 278 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 333

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 334 TGADSASVIFDAVQAAKARGIDVLIAD 360


>gi|257093467|ref|YP_003167108.1| hypothetical protein CAP2UW1_1882 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045991|gb|ACV35179.1| hypothetical protein CAP2UW1_1882 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 537

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 67/210 (31%), Gaps = 49/210 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCGVDEFGAEAEAIVF 71
           G+GK++ I  LK                  +  AE    R VLL         E      
Sbjct: 344 GSGKSSVIQHLKSL----------------STLAEWVDQRPVLLERPHTALSDE------ 381

Query: 72  AAARLD-------HVENVIRPALMEGKILL-CDRFLDSSYAYQGERDSSQH--LFLDSLQ 121
              R +                L    +LL CDR       +    D  +     L  LQ
Sbjct: 382 --DRREVDHWVSTQFRRKNFRLLTNKDLLLACDRTPLDPLVFAEVADVPRRAKEHLGVLQ 439

Query: 122 EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  E ++P   ++L    +  + R + R+   + A LDY  ++        ++ F+ +
Sbjct: 440 PNATGERLVPGHIVLLTASAEELMARAKERH---KGATLDYLRQQ--------QERFIQL 488

Query: 181 ARNQPDRCHIVD-SAHSFQSVATNILNIVW 209
               P     +  S+    SV   +  I+ 
Sbjct: 489 FGPDPKAITELSTSSRPLASVVRAVCKIIH 518


>gi|254805877|ref|YP_003084098.1| signal recognition particle protein [Neisseria meningitidis
           alpha14]
 gi|254669419|emb|CBA08634.1| signal recognition particle protein [Neisseria meningitidis
           alpha14]
          Length = 421

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 21/134 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q     V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAHGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
                     + ++ A   G  I+L D            R  +Q   ++ ++++   +Q+
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333

Query: 128 VMPD----CTIILD 137
            MPD      ++LD
Sbjct: 334 AMPDAPHEIIVVLD 347


>gi|207092252|ref|ZP_03240039.1| adenylate kinase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 191

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E+ ++ V         + V++     + R   R     D     + + H + R +FL
Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVGEMQKYILSF 189


>gi|188585955|ref|YP_001917500.1| guanylate kinase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350642|gb|ACB84912.1| guanylate kinase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 204

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 52/169 (30%), Gaps = 27/169 (15%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M   GL +   G  G GK T    L        Y +   TR P          + +    
Sbjct: 1   MKKEGLLVVLSGPSGVGKGTICDHLLDKYSDLEYSISMTTRSPRAGEIHGEDYYFVSKSE 60

Query: 59  VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             E  A+ E + +A    ++       +   L EGK ++ +  +D   A Q ++      
Sbjct: 61  FQEMIADDEFLEWAEVFGNYYGTPRKFVNSKLREGKSVVLE--IDIQGALQVKQRCPNG- 117

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                              I  LP   D   KR++ R + ++       
Sbjct: 118 -----------------VFIFLLPPSLDELHKRIRKRGTEQDKDMQTRL 149


>gi|167771709|ref|ZP_02443762.1| hypothetical protein ANACOL_03081 [Anaerotruncus colihominis DSM
           17241]
 gi|167666349|gb|EDS10479.1| hypothetical protein ANACOL_03081 [Anaerotruncus colihominis DSM
           17241]
          Length = 281

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 15/143 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV-LLSCG 58
           M  G F+   G  G GKTT +  +  FL  +    +   ++       E AR +  +   
Sbjct: 24  MEKGEFVCVLGANGCGKTTLLKSILAFLTPQHGQVLLYGKDIHQMDERERARKIAYIPQY 83

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL-------DSSYAYQGERDS 111
                      V    R  H+  + RP   + +  + D  +        ++ +Y      
Sbjct: 84  HTPPFPFTVRDVVLMGRTPHLSRICRPTEKDCR--IADESMERLGIAHYANKSYTALSGG 141

Query: 112 SQHLFLDSLQEISVQEVMPDCTI 134
            + + + + + ++ Q   PD  I
Sbjct: 142 QRQMVVIA-RALAQQ---PDLLI 160


>gi|161508121|ref|YP_001578089.1| cobalt transport ATP-binding protein [Lactobacillus helveticus
          DPC 4571]
 gi|160349110|gb|ABX27784.1| Cobalt transport ATP-binding protein [Lactobacillus helveticus
          DPC 4571]
          Length = 576

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          G FI   G  G+GKTT ++ LK+ L  K 
Sbjct: 54 GDFIVIAGNTGSGKTTLLNHLKKELMPKG 82


>gi|116251089|ref|YP_766927.1| hypothetical protein RL1320A [Rhizobium leguminosarum bv. viciae
          3841]
 gi|115255737|emb|CAK06818.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 169

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I F G+ G+GKTT    L   L   +  V
Sbjct: 1  MLIIFGGLPGSGKTTIARALAERLNAVHVRV 31


>gi|154174572|ref|YP_001407898.1| adenylate kinase [Campylobacter curvus 525.92]
 gi|166980308|sp|A7GXF6|KAD_CAMC5 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|112803401|gb|EAU00745.1| adenylate kinase (ATP-AMP transphosphorylase) [Campylobacter curvus
           525.92]
          Length = 188

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 74/222 (33%), Gaps = 45/222 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVL 54
           M     I   G  G+GKTT  SL+ +  +   Y    T +        G+   +     +
Sbjct: 1   MKKLFLII--GAPGSGKTTDASLIAK--EDDKYAHFSTGDLLRAEVASGSELGKKIDSFI 56

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSS 112
               +                 + V N I  A+   E   ++ D +  S      E+ + 
Sbjct: 57  SKGNLVPL--------------EVVVNAIISAIKGSEKSNIIIDGYPRS-----VEQMTE 97

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMI 169
               L +  EI+++       I +D+   I  +RV  R    +       +   +  +  
Sbjct: 98  LDKVLSAQNEINLRG-----VIEVDVSEAIARERVLGRARGADDNNEVFNNRM-KVYLDP 151

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            E  R+ +        +  H+V+   + + +  +I  ++  L
Sbjct: 152 IEAIRKFY-----KGKNLLHVVNGERTIEPIVADIKKLIENL 188


>gi|49479581|ref|YP_037014.1| hypothetical protein BT9727_2690 [Bacillus thuringiensis serovar
          konkukian str. 97-27]
 gi|49331137|gb|AAT61783.1| hypothetical protein BT9727_2690 [Bacillus thuringiensis serovar
          konkukian str. 97-27]
          Length = 282

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLISDILSQNKIEVELFLE 39


>gi|58337010|ref|YP_193595.1| excinuclease subunit A [Lactobacillus acidophilus NCFM]
 gi|227903572|ref|ZP_04021377.1| excinuclease subunit A [Lactobacillus acidophilus ATCC 4796]
 gi|58254327|gb|AAV42564.1| excinuclease subunit A [Lactobacillus acidophilus NCFM]
 gi|227868459|gb|EEJ75880.1| excinuclease subunit A [Lactobacillus acidophilus ATCC 4796]
          Length = 946

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656


>gi|15892137|ref|NP_359851.1| signal recognition particle protein [Rickettsia conorii str. Malish
           7]
 gi|28380155|sp|Q92J55|SRP54_RICCN RecName: Full=Signal recognition particle protein; AltName:
           Full=Fifty-four homolog
 gi|15619266|gb|AAL02752.1| signal recognition particle protein [Rickettsia conorii str. Malish
           7]
          Length = 449

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|34580832|ref|ZP_00142312.1| signal recognition particle protein [Rickettsia sibirica 246]
 gi|28262217|gb|EAA25721.1| signal recognition particle protein [Rickettsia sibirica 246]
          Length = 449

 Score = 38.5 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|325111184|ref|YP_004272252.1| sulfate-transporting ATPase [Planctomyces brasiliensis DSM 5305]
 gi|324971452|gb|ADY62230.1| Sulfate-transporting ATPase [Planctomyces brasiliensis DSM 5305]
          Length = 308

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 22/165 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVD 60
           FI   G  G+GKTT + ++   L     + +V  +   T  AE  R ++          D
Sbjct: 32  FI---GPNGSGKTTTMRMIATLLNPDYGEAYVCGKSIYT-HAEEIRRLVGFMPDFFGVYD 87

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDS 119
           +         FAA     +    R  + E K+ L D  F   +   Q  R  +Q + L  
Sbjct: 88  DMTVLEYLEFFAA--TYRINGPNRRKICEEKLELVDMSFKRDAMVSQLSRGQTQRIGLA- 144

Query: 120 LQEISVQEVMPDCTIILDLPVDIGL---KRVQNRYSLRESACLDY 161
              + + +      ++LD     GL    R++ R  L+    ++ 
Sbjct: 145 --RVMLHDPQ---VLLLD-EPASGLDPRARIEIRNLLKRLGAMNK 183


>gi|288930679|ref|YP_003434739.1| PilT protein domain protein [Ferroglobus placidus DSM 10642]
 gi|288892927|gb|ADC64464.1| PilT protein domain protein [Ferroglobus placidus DSM 10642]
          Length = 593

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T  + +  +L    Y V     P      +       +    +
Sbjct: 259 QRGILIA--GPPGAGKSTFAASIANYLMENGYMVKTMESPRDLMVRDEITQY--APLEGD 314

Query: 62  FGAEAEAIVF 71
               A+ ++ 
Sbjct: 315 MTLTADVLLL 324


>gi|254695255|ref|ZP_05157083.1| polyamine ABC transporter, ATP-binding protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|256014904|ref|YP_003104913.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella microti CCM 4915]
 gi|261215619|ref|ZP_05929900.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 3 str. Tulya]
 gi|255997564|gb|ACU49251.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella microti CCM 4915]
 gi|260917226|gb|EEX84087.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 3 str. Tulya]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|238507367|ref|XP_002384885.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357]
 gi|220689598|gb|EED45949.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357]
          Length = 1314

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1075 IKSGQFVAFVGPSGCGKTTVISLLERF 1101


>gi|209965468|ref|YP_002298383.1| Bifunctional enzyme cysN [Rhodospirillum centenum SW]
 gi|209958934|gb|ACI99570.1| Bifunctional enzyme cysN [Rhodospirillum centenum SW]
          Length = 655

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 41/162 (25%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L                         LL       G   + 
Sbjct: 477 FTGLSGAGKSTIANLVEKKLHADGRHTF-----------------LLDGDNLRHGLTRDL 519

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              AA R +    V  V +     G I+L      S  +            L        
Sbjct: 520 GFGAADRTENIRRVAEVAKLMADAGLIVLV-----SLISPFRADRRMARDLLPP------ 568

Query: 126 QEVMPDCTIILDLPVDI-------GLKRVQNRYSLRESACLD 160
                   + +D P+++       GL R   R  + +   +D
Sbjct: 569 GGF---LEVFVDTPLEVAEGRDVKGLYRRARRGEIAQFTGID 607


>gi|241203685|ref|YP_002974781.1| hypothetical protein Rleg_0946 [Rhizobium leguminosarum bv.
          trifolii WSM1325]
 gi|240857575|gb|ACS55242.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          trifolii WSM1325]
          Length = 169

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I F G+ G+GKTT    L   L   +  V
Sbjct: 1  MLIIFGGLPGSGKTTIARALAERLNAVHVRV 31


>gi|119953420|ref|YP_945629.1| spermidine/putrescine transport ATP-binding protein PotA
          [Borrelia turicatae 91E135]
 gi|119862191|gb|AAX17959.1| spermidine/putrescine transport ATP-binding protein PotA
          [Borrelia turicatae 91E135]
          Length = 347

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FI+  G  G GKTT I ++  FL +   ++H 
Sbjct: 35 FITLLGPSGCGKTTLIKIIGGFLNQNKGEIHF 66


>gi|150021190|ref|YP_001306544.1| ABC transporter related [Thermosipho melanesiensis BI429]
 gi|149793711|gb|ABR31159.1| ABC transporter related [Thermosipho melanesiensis BI429]
          Length = 254

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G FI   G  G+GK+T + L+ + L+ K+  + +
Sbjct: 28 KGKFIGIIGPNGSGKSTTLKLVTKLLKPKSGKILL 62


>gi|94263527|ref|ZP_01287338.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium
          MLMS-1]
 gi|94266474|ref|ZP_01290166.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium
          MLMS-1]
 gi|93452919|gb|EAT03427.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium
          MLMS-1]
 gi|93456060|gb|EAT06207.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium
          MLMS-1]
          Length = 253

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          I+  G  G GKTT ++LL R L+    +V V
Sbjct: 3  IAISGKGGVGKTTIMALLARRLKEMGREVLV 33


>gi|88799797|ref|ZP_01115371.1| Adenylylsulfate kinase and related kinase [Reinekea sp. MED297]
 gi|88777531|gb|EAR08732.1| Adenylylsulfate kinase and related kinase [Reinekea sp. MED297]
          Length = 200

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L    Y                    LL       G   + 
Sbjct: 30  FTGLSGAGKSTLANLVEQNLFAHGYH-----------------SFLLDGDNVRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +     G I+L         A+    +  + L  D     + 
Sbjct: 73  GFSDADRVENIRRIGEVAKLMTDSGLIVLS--------AFISPFERDRALVRDL---FAD 121

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E      + +D P+D+  +R
Sbjct: 122 HEF---LEVYVDAPLDVCERR 139


>gi|259047488|ref|ZP_05737889.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Granulicatella adiacens ATCC 49175]
 gi|259035679|gb|EEW36934.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Granulicatella adiacens ATCC 49175]
          Length = 294

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 12  IEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE---AEA 68
             G GK+T I +L   L+     V    +   +      +H++      E   E    E 
Sbjct: 35  PNGVGKSTLIQILSGHLRNNGISVSYQGKNYTSDTLFMRQHIVKMPDQSELYDELNGIEH 94

Query: 69  IVFAAARLD----HVENVIRPALMEGKI 92
           + F A+        V+ VI    MEG I
Sbjct: 95  LNFYASMWKVASGTVQTVIEQLKMEGYI 122


>gi|255629329|gb|ACU15009.1| unknown [Glycine max]
          Length = 207

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 32/145 (22%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I   G+ G+GK+T    L + L  K                +  R         +  
Sbjct: 30  GCVIWLTGLSGSGKSTIACALSQSLHSKGK-------LSYILDGDNIR----HGLNQDLS 78

Query: 64  AEAEAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDSLQ 121
             AE       R +++  +   A L     ++C   + S  + YQ +RD+ + L      
Sbjct: 79  FRAE------DRSENIRRIGEVAKLFADAGVIC---ITSLISPYQKDRDACRAL------ 123

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
            +S  +      + +D+P+ +   R
Sbjct: 124 -LSKGDF---IEVFIDVPLHVCEAR 144


>gi|239608289|gb|EEQ85276.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis ER-3]
          Length = 963

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 11/61 (18%)

Query: 10  EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           EG  G+GK+T ISLL + L    +++   + P G+  +        S G    GA+ E  
Sbjct: 319 EGPAGSGKSTTISLLSKAL---GFEIVEWKNPLGSEYS--------SQGYVSMGAQFEDF 367

Query: 70  V 70
           +
Sbjct: 368 L 368


>gi|188578476|ref|YP_001915405.1| adenylate kinase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522928|gb|ACD60873.1| adenylate kinase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 182

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 68/205 (33%), Gaps = 33/205 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + LK            T E       +  R  + +       A+     
Sbjct: 2   GPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE---- 46

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
              AR D V + I   ++E ++   D  +   +   G   +      ++L  +  +   P
Sbjct: 47  -VMARGDLVSDDILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALCALLSKIGQP 101

Query: 131 -DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------N 183
            D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D          
Sbjct: 102 LDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIGFYE 155

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           Q  +   VD   S   V   I   +
Sbjct: 156 QRGKLTRVDGVGSLDEVLERIRKAL 180


>gi|150402706|ref|YP_001330000.1| nucleotide kinase [Methanococcus maripaludis C7]
 gi|166218740|sp|A6VHC3|KAD6_METM7 RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP
          transphosphorylase
 gi|150033736|gb|ABR65849.1| nucleotide kinase [Methanococcus maripaludis C7]
          Length = 181

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I+  G  G GK+T  +LL   L+    D+
Sbjct: 1  MIIAITGTPGVGKSTVSNLLFEKLKSGGKDI 31


>gi|150004203|ref|YP_001298947.1| guanylate kinase [Bacteroides vulgatus ATCC 8482]
 gi|254884779|ref|ZP_05257489.1| guanylate kinase [Bacteroides sp. 4_3_47FAA]
 gi|294775234|ref|ZP_06740758.1| guanylate kinase [Bacteroides vulgatus PC510]
 gi|319644158|ref|ZP_07998683.1| guanylate kinase [Bacteroides sp. 3_1_40A]
 gi|149932627|gb|ABR39325.1| guanylate kinase [Bacteroides vulgatus ATCC 8482]
 gi|254837572|gb|EET17881.1| guanylate kinase [Bacteroides sp. 4_3_47FAA]
 gi|294450939|gb|EFG19415.1| guanylate kinase [Bacteroides vulgatus PC510]
 gi|317384280|gb|EFV65251.1| guanylate kinase [Bacteroides sp. 3_1_40A]
          Length = 189

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58
           M +G  I F    G+GK+T I+ L       ++ +  T  P          +  LS    
Sbjct: 1   MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF 60

Query: 59  -----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                 +EF    E   +       ++  +   L  G+ ++ D
Sbjct: 61  RQRIANNEFLEYEEV--YENRFYGTLKAQVEKQLEAGQNVIFD 101


>gi|92109430|ref|YP_571718.1| cobyrinic acid a,c-diamide synthase [Nitrobacter hamburgensis X14]
 gi|91802512|gb|ABE64886.1| Cobyrinic acid a,c-diamide synthase [Nitrobacter hamburgensis X14]
          Length = 407

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L + L  + Y V           +       L     EF  E    ++ A
Sbjct: 134 GSGKTTTAAHLAQHLTLQGYRVLAVDLDPQASLSA------LHGYQPEFDIEENGTLYGA 187

Query: 74  ARLD----HVENVIRPALMEGKILL 94
            R D     + ++IRP    G  ++
Sbjct: 188 IRYDDARRDLCDIIRPTYFSGLDII 212


>gi|74314747|ref|YP_313166.1| D-gluconate kinase [Shigella sonnei Ss046]
 gi|331656102|ref|ZP_08357090.1| shikimate kinase [Escherichia coli M718]
 gi|73858224|gb|AAZ90931.1| gluconate kinase [Shigella sonnei Ss046]
 gi|323166634|gb|EFZ52393.1| thermosensitive gluconokinase [Shigella sonnei 53G]
 gi|331046456|gb|EGI18546.1| shikimate kinase [Escherichia coli M718]
          Length = 187

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQDRI 174


>gi|94986383|ref|YP_605747.1| guanylate kinase [Deinococcus geothermalis DSM 11300]
 gi|119371213|sp|Q1IW06|KGUA_DEIGD RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|94556664|gb|ABF46578.1| Guanylate kinase [Deinococcus geothermalis DSM 11300]
          Length = 242

 Score = 38.5 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 56/220 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GL I   G  G GK T      R+L     DV  +       A    R      GVD 
Sbjct: 20  HRGLLIVMTGASGVGKGTLRE---RWL--AGQDVFYSTSWTTREARPGERD-----GVDY 69

Query: 62  FGAEAEAIV-------------FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
                E  +             F           I  AL  G+ ++ +  ++   A Q +
Sbjct: 70  VFVTPEVFLEKVRQNGFLEHAQFVGNHYGTPTEPIEAALARGQDVVLE--IEVEGAMQVK 127

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
               +                     I  +P    L  ++ R + R +   +  E++   
Sbjct: 128 ERMGEEAV---------------LVFI--MPP--SLTELRRRLTGRATETPERIEKR--- 165

Query: 169 IHEKRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATN 203
             ++ R    +I      R  IV+     +    Q+V   
Sbjct: 166 -LQRARD---EIMAAHAFRYVIVNDDLDRAVRELQAVQRA 201


>gi|306841084|ref|ZP_07473806.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO2]
 gi|306288894|gb|EFM60199.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO2]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDSGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|298712080|emb|CBJ26660.1| similar to 3-phosphoadenosine 5-phosphosulfate synthase 2 isoform 2
           [Ectocarpus siliculosus]
          Length = 1109

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 39/136 (28%), Gaps = 25/136 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L+  L  +                       L       G   +   
Sbjct: 220 GLSGSGKSTIAKALEEELVLRGGKHVYR----------------LDGDNIRTGLNRDLGF 263

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             A R + V  V   +      L  D    +  +       ++       ++  +     
Sbjct: 264 SEADRGESVRRVGETSC-----LFSDSGTITIVSLVSPYRDARDAVRKRHEDQGIPFFE- 317

Query: 131 DCTIILDLPVDIGLKR 146
              + LD+P++   +R
Sbjct: 318 ---VFLDVPLEEVQRR 330


>gi|293412363|ref|ZP_06655086.1| predicted protein [Escherichia coli B354]
 gi|291469134|gb|EFF11625.1| predicted protein [Escherichia coli B354]
          Length = 254

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK--------NYDVHVTREP------GGTPAAEAARH 52
           I+  G +G+GK+T  + L   L  +                E        G P     R 
Sbjct: 34  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 93

Query: 53  VLLSCGVDEFGA---EAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
                              +++  +  R      ++  +  +G +L+ DR+
Sbjct: 94  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 143


>gi|282890550|ref|ZP_06299073.1| hypothetical protein pah_c022o141 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499547|gb|EFB41843.1| hypothetical protein pah_c022o141 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 628

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +  G F++  G  GAGK+T + LL R    +  ++ +  +P       + R ++
Sbjct: 401 IRKGEFVAIVGPTGAGKSTIVQLLPRLYDPQKGEIRIDGQPLNAYTQRSLREMI 454


>gi|256059644|ref|ZP_05449841.1| polyamine ABC transporter, ATP-binding protein [Brucella neotomae
           5K33]
 gi|261323615|ref|ZP_05962812.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           neotomae 5K33]
 gi|261299595|gb|EEY03092.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           neotomae 5K33]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|254720644|ref|ZP_05182455.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. 83/13]
 gi|265985689|ref|ZP_06098424.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella sp.
           83/13]
 gi|306837370|ref|ZP_07470249.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. NF
           2653]
 gi|306846316|ref|ZP_07478877.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO1]
 gi|264664281|gb|EEZ34542.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella sp.
           83/13]
 gi|306273311|gb|EFM55180.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO1]
 gi|306407562|gb|EFM63762.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. NF
           2653]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|261203353|ref|XP_002628890.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis
           SLH14081]
 gi|239586675|gb|EEQ69318.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis
           SLH14081]
          Length = 959

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 11/61 (18%)

Query: 10  EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           EG  G+GK+T ISLL + L    +++   + P G+  +        S G    GA+ E  
Sbjct: 315 EGPAGSGKSTTISLLSKAL---GFEIVEWKNPLGSEYS--------SQGYVSMGAQFEDF 363

Query: 70  V 70
           +
Sbjct: 364 L 364


>gi|228934203|ref|ZP_04097042.1| hypothetical protein bthur0009_26620 [Bacillus thuringiensis
          serovar andalousiensis BGSC 4AW1]
 gi|228825371|gb|EEM71165.1| hypothetical protein bthur0009_26620 [Bacillus thuringiensis
          serovar andalousiensis BGSC 4AW1]
          Length = 282

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINEILSQNKIEVELFLE 39


>gi|209966972|ref|YP_002299887.1| maltose [Rhodospirillum centenum SW]
 gi|209960438|gb|ACJ01075.1| maltose [Rhodospirillum centenum SW]
          Length = 387

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLL 55
           SG FI F G  G GK+T + L+   L+           +V   R P     A   +   L
Sbjct: 28  SGEFIVFVGPSGCGKSTLLRLVAG-LEEPTGGEVMIGGEVVNDRPPSDRGIAMVFQSYAL 86

Query: 56  SCGVDEFGAEAEAIVFAAA 74
              +  +   A  +  A A
Sbjct: 87  YPHMTAYENLAFGLKLARA 105


>gi|220909793|ref|YP_002485104.1| uridine kinase [Cyanothece sp. PCC 7425]
 gi|219866404|gb|ACL46743.1| uridine kinase [Cyanothece sp. PCC 7425]
          Length = 209

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 26/159 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L ++  GI+G+GK      L   L ++  DVH                  L+     F  
Sbjct: 24  LLVAISGIDGSGKGYITEKLVAQLNQQ--DVHAIALNIDPW---------LTPPEQRFNP 72

Query: 65  E--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE     A   + +   +   L   + +    +L+++   Q     +Q      +  
Sbjct: 73  HHPAEHFYHHAFAFEQIFQQLIDPLRTNRSI----YLETTLTGQFGIPFTQIYDFQDVDI 128

Query: 123 ISVQEVMP---------DCTIILDLPVDIGLKRVQNRYS 152
           I ++ +           D    ++   +  L R   R  
Sbjct: 129 IVLEGIFLLKRSLRQNYDLAFWIECSFETALARALQRNQ 167


>gi|152998323|ref|YP_001343158.1| signal recognition particle-docking protein FtsY [Marinomonas sp.
           MWYL1]
 gi|150839247|gb|ABR73223.1| signal recognition particle-docking protein FtsY [Marinomonas sp.
           MWYL1]
          Length = 413

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 217 GVNGVGKTTTIGKLAKKYQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 272

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A  +G  I++ D
Sbjct: 273 TGADSASVIYDAIESAKAKGVDIVIAD 299


>gi|167645713|ref|YP_001683376.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Caulobacter sp. K31]
 gi|167348143|gb|ABZ70878.1| sulfate adenylyltransferase, large subunit [Caulobacter sp. K31]
          Length = 642

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 34/148 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G+ GAGK+T  +L+++ L       +                 LL      
Sbjct: 466 QRGRVVWLTGLSGAGKSTIANLVEKRLHALGRHTY-----------------LLDGDNVR 508

Query: 62  FGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G           R++    V  V +  +  G I+L         A+     + + L  +
Sbjct: 509 HGLNKNLGFTEEDRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRAERRLARE 560

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            L++    E      + +D P+ +  +R
Sbjct: 561 ILRDGEFVE------VFVDTPLAVAEQR 582


>gi|17989468|ref|NP_542101.1| iron(III)-transport ATP-binding protein sfuC [Brucella melitensis
           bv. 1 str. 16M]
 gi|225685974|ref|YP_002733946.1| polyamine ABC transporter ATP-binding protein [Brucella melitensis
           ATCC 23457]
 gi|256043034|ref|ZP_05445979.1| polyamine ABC transporter, ATP-binding protein [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256111979|ref|ZP_05452930.1| polyamine ABC transporter, ATP-binding protein [Brucella melitensis
           bv. 3 str. Ether]
 gi|256262902|ref|ZP_05465434.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 2
           str. 63/9]
 gi|260564267|ref|ZP_05834752.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 1
           str. 16M]
 gi|265989473|ref|ZP_06102030.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|265993428|ref|ZP_06105985.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           melitensis bv. 3 str. Ether]
 gi|17985348|gb|AAL54365.1| iron(iii)-transport ATP-binding protein sfuc [Brucella melitensis
           bv. 1 str. 16M]
 gi|225642079|gb|ACO01992.1| polyamine ABC transporter, ATP-binding protein [Brucella melitensis
           ATCC 23457]
 gi|260151910|gb|EEW87003.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 1
           str. 16M]
 gi|262764298|gb|EEZ10330.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           melitensis bv. 3 str. Ether]
 gi|263000142|gb|EEZ12832.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092739|gb|EEZ16948.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 2
           str. 63/9]
 gi|326410297|gb|ADZ67361.1| polyamine ABC transporter ATP-binding protein [Brucella melitensis
           M28]
 gi|326553591|gb|ADZ88230.1| polyamine ABC transporter ATP-binding protein [Brucella melitensis
           M5-90]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|49478170|ref|YP_037428.1| cobalt ABC transporter ATP-binding protein [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|56748688|sp|Q6HG98|Y3105_BACHK RecName: Full=Putative ABC transporter ATP-binding protein
           BT9727_3105
 gi|49329726|gb|AAT60372.1| cobalt ABC transporter, ATP-binding protein [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 551

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 10/88 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI   G  G+GKTT +   K+ L         T   G           LL    D
Sbjct: 29  IQKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPD 78

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM 88
              A+   +VF       V + +   L 
Sbjct: 79  LLSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|317012002|gb|ADU82610.1| shikimate kinase [Helicobacter pylori Lithuania75]
          Length = 162

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALR---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  ++L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHENLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKIDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|311280749|ref|YP_003942980.1| ABC transporter related protein [Enterobacter cloacae SCF1]
 gi|308749944|gb|ADO49696.1| ABC transporter related protein [Enterobacter cloacae SCF1]
          Length = 272

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 20/47 (42%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P         R +
Sbjct: 52 VTILGPSGSGKSTLIRLINQLETLSGGEILIDNQPTRALQGRKLRQL 98


>gi|307564668|ref|ZP_07627198.1| guanylate kinase [Prevotella amnii CRIS 21A-A]
 gi|307346596|gb|EFN91903.1| guanylate kinase [Prevotella amnii CRIS 21A-A]
          Length = 190

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 17/106 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-------TREPGGTPA-AEAARHVL 54
            G  I F    G+GK+T    + ++L +++ ++H+       TR+P G          + 
Sbjct: 2   QGKLIIFSAPSGSGKST----IVQWLMQEHPELHLAFSISCTTRQPRGKERNGVEYIFLS 57

Query: 55  LSCGVDEFGAEAEAIVF---AAARLD-HVENVIRPALMEGKILLCD 96
           L    ++     E + +      R    ++  I   L  G+ ++ D
Sbjct: 58  LDDFKNKIDNN-EFLEYEEVYKDRFYGTLKKQIESQLKAGQNVIFD 102


>gi|303235147|ref|ZP_07321767.1| polyphosphate:nucleotide phosphotransferase, PPK2 family
           [Finegoldia magna BVS033A4]
 gi|302493739|gb|EFL53525.1| polyphosphate:nucleotide phosphotransferase, PPK2 family
           [Finegoldia magna BVS033A4]
          Length = 286

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 31/202 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ +  + ++ AGK + +  +   L      V   ++P      E   H  L      
Sbjct: 56  KKGILVVLQAMDAAGKDSLVKKVFTALNPAGCKVTSFKQPST----EELDHDYLWRITKA 111

Query: 62  FGAEAEAIVFAAARLD-----HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             A  E  +F  +  +      V N++     +       RF D + A++   D++    
Sbjct: 112 TPAYGEVGIFNRSHYEDVLVTRVHNLVNKKNDDDFW--EKRFEDIN-AFEKYLDNNGIKV 168

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHEK 172
           +                  L +  D   +R+ +R +L E     A  D  ER++   + +
Sbjct: 169 VK---------------FFLHVSKDEQKERLLDRINLEEKHWKFAASDILERENWDDYHR 213

Query: 173 RRQIFLDIARNQPDRCHIVDSA 194
             +  L+         ++V + 
Sbjct: 214 AYEDMLEHTSTDYAPWYVVPAD 235


>gi|238485103|ref|XP_002373790.1| guanylate kinase [Aspergillus flavus NRRL3357]
 gi|317141020|ref|XP_003189320.1| guanylate kinase [Aspergillus oryzae RIB40]
 gi|220701840|gb|EED58178.1| guanylate kinase [Aspergillus flavus NRRL3357]
          Length = 230

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 27/163 (16%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  GAGK+T +  L   +     + V H TR P   P  +  R    +   D    
Sbjct: 42  VVVSGPSGAGKSTLLKRLFADYPDTFGFSVSHTTRAP--RPGEQHGREYYFTTKADFLDL 99

Query: 65  EA-----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     E   F           ++    +G+I + D           E +  + +    
Sbjct: 100 VSKNGFIEHAQFGGNHYGTSVQAVKDIAKKGRICILD----------IEMEGVKQVKRTD 149

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           L    +    P         V+   +R++ R +  E +     
Sbjct: 150 LNARFMFLAPP--------SVEELERRLRGRGTESEESLSKRL 184


>gi|218710617|ref|YP_002418238.1| cobyrinic acid A,C-diamide synthase [Vibrio splendidus LGP32]
 gi|218323636|emb|CAV19919.1| Cobyrinic acid A,C-diamide synthase [Vibrio splendidus LGP32]
          Length = 434

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
          G+GKTT ++ L R L ++   V V +   G    +      LS   D    + +  +   
Sbjct: 17 GSGKTTVVAALARALVQQGKKVRVFK--TGPDFIDPQ---FLSIASDTPTYQLDLWMCGE 71

Query: 74 ARLDHVENVIRPALMEGKILL 94
          A   H+  + + AL    IL+
Sbjct: 72 AECQHL--IYQAALEADVILI 90


>gi|239616584|ref|YP_002939906.1| dephospho-CoA kinase [Kosmotoga olearia TBF 19.5.1]
 gi|239505415|gb|ACR78902.1| dephospho-CoA kinase [Kosmotoga olearia TBF 19.5.1]
          Length = 193

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 75/208 (36%), Gaps = 43/208 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-------LLSCGVDEFGAE- 65
           G GK+    LL   L      V      G     E    +       +L     +   + 
Sbjct: 11  GCGKS----LLVSLLSGPETKVIDLDRLGHEVLKELKSQLVLTYGSGILDNSRKKIDRKK 66

Query: 66  -AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD--SLQ 121
             E +   + +L  + +++ P + E  K ++              +   +++ +D   + 
Sbjct: 67  LGEIVFKDSRKLKLLNSIVHPLIKEKVKKIIS-------------KTRKKYVLIDGALIH 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +I + ++  D  I +D P ++ +KR+ +R   RE   +     +  + + K    + DIA
Sbjct: 114 QIGLGKLC-DLIIWVDCPDEVAIKRLASRGIPRE-RAISILNSQKELENYKV---YSDIA 168

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209
                    +D+  S Q +   +  I+ 
Sbjct: 169 ---------IDNTGSPQELLIKVREILR 187


>gi|67459498|ref|YP_247122.1| Signal recognition particle protein [Rickettsia felis URRWXCal2]
 gi|67005031|gb|AAY61957.1| Signal recognition particle protein [Rickettsia felis URRWXCal2]
          Length = 487

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L+ +N  V +       PAA+    +L
Sbjct: 147 GLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 190


>gi|87311737|ref|ZP_01093852.1| Shikimate kinase II [Blastopirellula marina DSM 3645]
 gi|87285521|gb|EAQ77440.1| Shikimate kinase II [Blastopirellula marina DSM 3645]
          Length = 177

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 60/213 (28%), Gaps = 61/213 (28%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+    LL   L              G P  +A   +              A +FAA
Sbjct: 10  GVGKSHVARLLGERL--------------GWPVIDADVEL------QRRAQRTIAQIFAA 49

Query: 74  A----RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                  D    VI   + + + ++                      L +    ++Q   
Sbjct: 50  DGEPAFRDLETAVIADLMQQDQQVVA---------------LGGGAVLRAENRAAIQANS 94

Query: 130 PDCTIILDLPVDIGLKRVQN-------RYSLRESACLDYFERKDVMIHEKRRQI-FLDIA 181
              T  L    D  + R+         R  L E    +  E+       + R+  + + A
Sbjct: 95  --YTFWLTADADTIMARISADAATATQRPRLTEMTPREEIEQ-----LLQVRESLYRETA 147

Query: 182 RNQPDRCHIVDSAH-SFQSVATNILNIVWELVQ 213
                   IVD+   + + VA  I      L++
Sbjct: 148 D------VIVDAQQQTPEEVAREIYQFFAPLIE 174


>gi|86146403|ref|ZP_01064727.1| cobyrinic acid a,c-diamide synthase [Vibrio sp. MED222]
 gi|85835882|gb|EAQ54016.1| cobyrinic acid a,c-diamide synthase [Vibrio sp. MED222]
          Length = 434

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
          G+GKTT ++ L R L ++   V V +   G    +      LS   D    + +  +   
Sbjct: 17 GSGKTTVVAALARALVQQGKKVRVFK--TGPDFIDPQ---FLSIASDTPTYQLDLWMCGE 71

Query: 74 ARLDHVENVIRPALMEGKILL 94
          A   H+  + + AL    IL+
Sbjct: 72 AECQHL--IYQAALEADVILI 90


>gi|108804310|ref|YP_644247.1| guanylate kinase [Rubrobacter xylanophilus DSM 9941]
 gi|119371282|sp|Q1AVZ3|KGUA_RUBXD RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|108765553|gb|ABG04435.1| guanylate kinase [Rubrobacter xylanophilus DSM 9941]
          Length = 191

 Score = 38.5 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M  G  I   G  GAGK+T I      + +  Y V  T
Sbjct: 1  MRRGRLIVVSGPSGAGKSTLIRAALDAVPQLAYSVSAT 38


>gi|330507923|ref|YP_004384351.1| adenylate kinase [Methanosaeta concilii GP-6]
 gi|328928731|gb|AEB68533.1| adenylate kinase [Methanosaeta concilii GP-6]
          Length = 215

 Score = 38.5 bits (89), Expect = 0.74,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 35/153 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T   ++        Y V            +  R  + S      G EA
Sbjct: 3   IILLGPPGSGKGTQAKMIADK-----YKV------THVSTGDILRENVRSG--TPLGVEA 49

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +  + A   +    + ++I+  L +  +          +   G   +            +
Sbjct: 50  KKFMDAGKLVPDALLIDIIKDRLAKDDV-------KGGWMLDGFPRTMPQAE-------A 95

Query: 125 VQEVMP------DCTIILDLPVDIGLKRVQNRY 151
           + +++P      D  + +D+P +  +KRV  R 
Sbjct: 96  LDKILPTLGQKIDVVLNIDVPDEELVKRVTGRR 128


>gi|215778370|ref|YP_002261510.1| conjugative transfer protein TraD [Aliivibrio salmonicida LFI1238]
 gi|208011415|emb|CAQ81879.1| conjugative transfer protein TraD [Aliivibrio salmonicida LFI1238]
          Length = 692

 Score = 38.5 bits (89), Expect = 0.74,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR---HVLLSCGVDEF-GA 64
            +G  GAGK+  +  L R+++++     +  + G T   +        +L+   +     
Sbjct: 192 IDGTTGAGKSVALRKLVRWIRKRGDKAII-YDKGCTFVGKFYNPETDTILNPFDERCANW 250

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQ 113
           +       A   +++   + P   +G    +   R + SS A+Q  +D+  
Sbjct: 251 DIWCDAKEAPDFENMAAALIPQHGDGDPFWVDSARTIFSSTAFQMMKDNEP 301


>gi|148558001|ref|YP_001257178.1| spermidine/putrescine ABC transporter ATP-binding protein [Brucella
           ovis ATCC 25840]
 gi|148369286|gb|ABQ62158.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella ovis ATCC 25840]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.74,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|41408180|ref|NP_961016.1| hypothetical protein MAP2082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396535|gb|AAS04399.1| hypothetical protein MAP_2082 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 479

 Score = 38.5 bits (89), Expect = 0.74,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 60/205 (29%), Gaps = 38/205 (18%)

Query: 11  GIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G+  +GKTT    L     L   + DV   R  G  P    +                  
Sbjct: 301 GLPASGKTTLARALAGRLGLVHLSSDVARKRMAGIPPTRRGSDEFGSGLYDPAMTRNT-- 358

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
             +AA R D         L  G+ ++ D                       L++++ +  
Sbjct: 359 --YAALRRDAAR-----WLRRGRGVVVD------------ATFGNPGERAQLRQLAHRLG 399

Query: 129 MPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD- 186
           + D   ++ D   D  + R++ R + +        E     +  + R  F       PD 
Sbjct: 400 V-DLHVVLCDADDDTLIARLKRRATEQGVVSDARIE-----LWPQLRAAF-----TPPDE 448

Query: 187 --RCHIVDSAHSFQSVATNILNIVW 209
                 VD+    +      L ++ 
Sbjct: 449 QASVLRVDATRDTEETVEQALGLLR 473


>gi|11497904|ref|NP_069126.1| adenylylsulfate kinase [Archaeoglobus fulgidus DSM 4304]
 gi|7387595|sp|O29953|CYSC_ARCFU RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS
          kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|2650349|gb|AAB90945.1| adenylylsulfate 3-phosphotransferase (cysC) [Archaeoglobus
          fulgidus DSM 4304]
          Length = 155

 Score = 38.5 bits (89), Expect = 0.74,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          I   G  GAGKTT  + L + L+   Y V
Sbjct: 5  IWITGPSGAGKTTLANALYKKLESMGYRV 33


>gi|117928441|ref|YP_872992.1| cytidylate kinase [Acidothermus cellulolyticus 11B]
 gi|117648904|gb|ABK53006.1| cytidylate kinase [Acidothermus cellulolyticus 11B]
          Length = 255

 Score = 38.5 bits (89), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 13/84 (15%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          + I+ +G  GAGK+T    + R L  +  D                R V L    +    
Sbjct: 10 MVIAIDGPAGAGKSTVARAVARRLGLRYLD-----------TGAMYRAVTLWVLRNGVSL 58

Query: 65 EAEAIVFAAARLDHVENVIRPALM 88
            E  V AAAR  HV +++  AL 
Sbjct: 59 TDERAVSAAAR--HVVDILDLALA 80


>gi|291563523|emb|CBL42339.1| guanylate kinase [butyrate-producing bacterium SS3/4]
          Length = 208

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 66/216 (30%), Gaps = 46/216 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G+ +   G  GAGK T +  L          V   TR P            L     +
Sbjct: 3   TKGVLVVVSGFSGAGKGTVMKALLEKYDNYALSVSATTRSPRPGEENGREYFFLTESQFE 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     E I       +H   V             D +  +   Y  ++ +     +  +
Sbjct: 63  DMIRNDELI-------EHARYV-------------DHYYGTPRKYVEDKMAVGKDVILEI 102

Query: 121 Q---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +    +++++  PD  ++  +P     K ++ R   R +   +  E++            
Sbjct: 103 EIQGALNIKKKFPDTLLVFIVPP--TAKDLKKRLIGRGTESAEVIEKR------------ 148

Query: 178 LDIARNQPDRCHIVDSAHSFQ--SVATNILNIVWEL 211
           L  A  +       D   S+    V  ++   V +L
Sbjct: 149 LRRAAEES------DGMDSYDYIVVNDDVDTCVEDL 178


>gi|315500981|ref|YP_004079868.1| metallophosphoesterase [Micromonospora sp. L5]
 gi|315407600|gb|ADU05717.1| metallophosphoesterase [Micromonospora sp. L5]
          Length = 838

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 46/202 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++  G+ G+GK+T                H    P    +++  R ++     D+  A 
Sbjct: 11  LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDTFRGLVADDENDQ-SAS 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A+A       L HV  +    L  G + + D      +A  G    ++            
Sbjct: 56  ADAF----DALHHVAAI---RLRRGLLTVVDATNLQPHARAGLIRVARE----------- 97

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIARNQ 184
            +V+P   I+LD+P  +  +R + R         L+   R+D+      RQ +  +AR  
Sbjct: 98  HDVLP-VAIVLDVPEAVAWERTEARADRTHGRQVLNRM-RRDL------RQSYGRLAREG 149

Query: 185 PDRCHIVDSAHSFQSV-ATNIL 205
             + H++        + A  I 
Sbjct: 150 FRKVHVL---RGVDEIDAAEIR 168


>gi|268324658|emb|CBH38246.1| hypothetical protein BSM_17230 [uncultured archaeon]
          Length = 418

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 59/181 (32%), Gaps = 42/181 (23%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G+ I+  G  GAGK+T   +L   ++  +      TR+P         R   LS     
Sbjct: 4   TGIIIT--GTSGAGKSTIAGILCEKIRDLQVAQAVTTRKP---------REDDLSNMYQY 52

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119
            G E         +LD    ++  A+  G+      +      YQ          + +  
Sbjct: 53  MGKEE------FDKLDKDRELLIKAIYRGE------YY--GITYQALNIVLDNSRVPILV 98

Query: 120 LQEISVQEVMPD---------CTIILDLPVDIGLKRVQNRYS-----LRESACLDYFERK 165
           L   S + +  D           I LD P D+   R+  R       + +    D    K
Sbjct: 99  LTPESTKSLEEDTKERGEFKYFIIFLDAPDDVLNSRLVERGEQNNENVEKQRREDRIYAK 158

Query: 166 D 166
           D
Sbjct: 159 D 159


>gi|239946690|ref|ZP_04698443.1| signal recognition particle protein [Rickettsia endosymbiont of
           Ixodes scapularis]
 gi|239920966|gb|EER20990.1| signal recognition particle protein [Rickettsia endosymbiont of
           Ixodes scapularis]
          Length = 449

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|257423008|ref|ZP_05599998.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294780946|ref|ZP_06746298.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|300859910|ref|ZP_07105998.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|257164832|gb|EEU94792.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|294451892|gb|EFG20342.1| conserved hypothetical protein [Enterococcus faecalis PC1.1]
 gi|295112677|emb|CBL31314.1| Zeta toxin. [Enterococcus sp. 7L76]
 gi|300850728|gb|EFK78477.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11]
 gi|323480314|gb|ADX79753.1| conserved hypothetical protein [Enterococcus faecalis 62]
          Length = 164

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + L + L+ +              + +  R  +L    DE G 
Sbjct: 4   KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + A++         + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 53  LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 97

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 98  VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 127


>gi|229825426|ref|ZP_04451495.1| hypothetical protein GCWU000182_00785 [Abiotrophia defectiva ATCC
           49176]
 gi|229789989|gb|EEP26103.1| hypothetical protein GCWU000182_00785 [Abiotrophia defectiva ATCC
           49176]
          Length = 580

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 14/70 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSC 57
           + SG  I+  G  G+GK+T ++LL+R+            EPG        +  R   L  
Sbjct: 362 IKSGKIIALSGESGSGKSTIVNLLQRY-----------AEPGEGQILVNGKDIRSFTLES 410

Query: 58  GVDEFGAEAE 67
             +      +
Sbjct: 411 WRNAISVVTQ 420


>gi|218706612|ref|YP_002414131.1| hypothetical protein ECUMN_3469 [Escherichia coli UMN026]
 gi|293406602|ref|ZP_06650528.1| ATP-binding protein yghS [Escherichia coli FVEC1412]
 gi|298382341|ref|ZP_06991938.1| ATP-binding protein yghS [Escherichia coli FVEC1302]
 gi|331674540|ref|ZP_08375300.1| hypothetical ATP-binding protein YghS [Escherichia coli TA280]
 gi|218433709|emb|CAR14626.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli UMN026]
 gi|291426608|gb|EFE99640.1| ATP-binding protein yghS [Escherichia coli FVEC1412]
 gi|298277481|gb|EFI18997.1| ATP-binding protein yghS [Escherichia coli FVEC1302]
 gi|331068634|gb|EGI40029.1| hypothetical ATP-binding protein YghS [Escherichia coli TA280]
          Length = 237

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126


>gi|193735096|gb|ACF20057.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 140

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 106

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 107 TTGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|196042997|ref|ZP_03110236.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB108]
 gi|196026481|gb|EDX65149.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB108]
          Length = 551

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 10/88 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI   G  G+GKTT +   K+ L         T   G           LL    D
Sbjct: 29  IQKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPD 78

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM 88
              A+   +VF       V + +   L 
Sbjct: 79  LLSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|220922934|ref|YP_002498236.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060]
 gi|219947541|gb|ACL57933.1| ABC transporter related [Methylobacterium nodulans ORS 2060]
          Length = 271

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G FIS  G  G GK+T + +L   L   + + ++     GT  +   R +
Sbjct: 48 GEFISIVGPSGCGKSTLLKILAGLLPASDGEAYL----NGTRISGPRRDI 93


>gi|326382164|ref|ZP_08203856.1| guanylate kinase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198894|gb|EGD56076.1| guanylate kinase [Gordonia neofelifaecis NRRL B-59395]
          Length = 206

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 71/215 (33%), Gaps = 41/215 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  +   G    GK+T ++ L+  +    + V   TREP          H +     D
Sbjct: 8   RRGRLVVLVGPSAVGKSTVVARLRELVPDLWFSVSATTREPRPGEVDGHDYHFVSREKFD 67

Query: 61  EFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                AE + +A       R       +R AL  G  +L                    L
Sbjct: 68  SMIERAELLEWADIHGGLQRSGTPAAPVRAALDAGSPVL--------------------L 107

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            +D +   +V+E MP+   +   P   D+ ++R+  R +    A     E     +    
Sbjct: 108 EVDLVGSRNVREAMPEAVSVFLAPPSWDVLVERLTGRGTESREAIDRRLETARTEM---- 163

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  AR++ +   +        + A  ++N++
Sbjct: 164 ------AARDEFEHVVV---NDDVDAAAQQLVNLL 189


>gi|313213132|emb|CBY36991.1| unnamed protein product [Oikopleura dioica]
          Length = 606

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 17/74 (22%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
          F G+ GAGK+T    L+  L  K    +                 +L       G   + 
Sbjct: 38 FTGLSGAGKSTIAMKLEEHLIAKGVPAY-----------------VLDGDNVRHGLNKDL 80

Query: 69 IVFAAARLDHVENV 82
              A R +++  +
Sbjct: 81 GFSLADREENIRRI 94


>gi|301167144|emb|CBW26723.1| cytidylate kinase [Bacteriovorax marinus SJ]
          Length = 230

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          M+    I+ +G  G+GK+T    L   L     D
Sbjct: 1  MSLSKVIAIDGPSGSGKSTIAKKLAESLNVLYID 34


>gi|298674678|ref|YP_003726428.1| signal recognition particle-docking protein FtsY [Methanohalobium
           evestigatum Z-7303]
 gi|298287666|gb|ADI73632.1| signal recognition particle-docking protein FtsY [Methanohalobium
           evestigatum Z-7303]
          Length = 359

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 17/146 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ +   LQ  NY   +    G T  A A   +      ++   + 
Sbjct: 167 IVFVGVNGTGKTTTIAKMANLLQNDNYSTVIAA--GDTFRAGAIDQI--ESHANKINTKL 222

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       V + ++ A      ++L D            R  +    +  L++   
Sbjct: 223 IKHQEMGDPAAVVYDAVQYAKSRSIDVVLSD---------TAGRMHTNVNLMSQLEK-VC 272

Query: 126 QEVMPDCTIILD--LPVDIGLKRVQN 149
           +   PD  I +D  +  +  ++R Q 
Sbjct: 273 RVSSPDLIIFVDEAVAGNDAVERAQQ 298


>gi|296331964|ref|ZP_06874428.1| putative ABC transporter component, ATP-binding protein [Bacillus
          subtilis subsp. spizizenii ATCC 6633]
 gi|305675642|ref|YP_003867314.1| putative ABC transporter ATP-binding protein [Bacillus subtilis
          subsp. spizizenii str. W23]
 gi|296150735|gb|EFG91620.1| putative ABC transporter component, ATP-binding protein [Bacillus
          subtilis subsp. spizizenii ATCC 6633]
 gi|305413886|gb|ADM39005.1| putative ABC transporter component, ATP-binding protein [Bacillus
          subtilis subsp. spizizenii str. W23]
          Length = 260

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPG 42
           G FISF G  G GKTT +S++   ++  +   +   REP 
Sbjct: 32 KGDFISFLGPSGCGKTTLLSIIAGLIEPSEGRVLIEGREPN 72


>gi|291545208|emb|CBL18317.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus
           sp. 18P13]
          Length = 460

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 19/24 (79%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTTH + L ++L+R+ + 
Sbjct: 108 GLQGSGKTTHAAKLAKYLKREGHR 131


>gi|229173209|ref|ZP_04300758.1| uridine kinase [Bacillus cereus MM3]
 gi|228610293|gb|EEK67566.1| uridine kinase [Bacillus cereus MM3]
          Length = 187

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189
           D TI +D P+DI + R   R    +   +D             R+ +L+     +P+   
Sbjct: 100 DATIFIDTPLDIAMARRILR--DFKEGTIDEIHNDLKHYMTFARKAYLEAIHTVKPNSDI 157

Query: 190 IVDSAHSFQSVATNILNIV 208
           ++D + S   +    +  +
Sbjct: 158 VLDGSLSVSEIMKRAVEEL 176


>gi|255936451|ref|XP_002559252.1| adenylylsulfate kinase AAA81521-Penicillium chrysogenum
           [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583872|emb|CAP91896.1| adenylylsulfate kinase AAA81521-Penicillium chrysogenum
           [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 211

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 31/151 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T    L+  L  ++  VH  R               L      
Sbjct: 23  QRGLTIWLTGLSASGKSTLAVELEHQLV-RDRGVHAYR---------------LDGDNIR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118
           FG   +     A R +++  +   A +         F DS S A                
Sbjct: 67  FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNSIAITSFISPYRKDRDTAR 117

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKR 146
            L E++       +P   + +D+PV++  +R
Sbjct: 118 QLHEVATPGEETGLPFVEVYVDVPVEVAEQR 148


>gi|195344754|ref|XP_002038944.1| GM17107 [Drosophila sechellia]
 gi|194134074|gb|EDW55590.1| GM17107 [Drosophila sechellia]
          Length = 4019

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 24/117 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G GK+T ISLLK+ L      VH       +      R   L     ++    
Sbjct: 1907 VVLVGPPGCGKSTIISLLKQALCGNQLKVHTISPKSMSRIQLLGR---LDADTRQWQDG- 1962

Query: 67   EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +   A     V     P+      ++CD              S    ++++L  +
Sbjct: 1963 -VLTHTA-----VAVNQEPS-QVHSWIVCD-------------GSIDPEWIEALNSV 1999


>gi|189205443|ref|XP_001939056.1| adenylate kinase isoenzyme 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187975149|gb|EDU41775.1| adenylate kinase isoenzyme 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 308

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 57/218 (26%), Gaps = 56/218 (25%)

Query: 11  GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDEF 62
           G  GAGK T    L      + L   +    + RE     G+   E  +  +    +   
Sbjct: 121 GGPGAGKGTQCQKLVSDYGFKHLSAGD----LLREEQDRQGSEFGEMIKTYIKEGTIVPM 176

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                        +  +EN +R ++  G  + L D F                  LD   
Sbjct: 177 EV----------TVQLLENAMRNSIESGNNMFLIDGF---------------PRKLDQAH 211

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                      T+  D       KR+  R      A  +          E  R+ F    
Sbjct: 212 AFERSVCPSKFTLFFDCSEASMEKRLLQRGETSGRADDNP---------ESIRKRFRTFV 262

Query: 182 R---------NQPDRCHIVDSAHSFQSVATNILNIVWE 210
                         R   V++  S   V  ++   + E
Sbjct: 263 ETSMPVVTEFESQGRVIKVNAETSPDEVYKHVQEKLKE 300


>gi|118478604|ref|YP_895755.1| cobalt ABC transporter ATP-binding protein [Bacillus thuringiensis
           str. Al Hakam]
 gi|118417829|gb|ABK86248.1| cobalt ABC transporter, ATP-binding protein [Bacillus thuringiensis
           str. Al Hakam]
          Length = 553

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 10/88 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G FI   G  G+GKTT +   K+ L         T   G           LL    D
Sbjct: 31  IQKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPD 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM 88
              A+   +VF       V + +   L 
Sbjct: 81  LLSAQEIGMVFQNPENQLVMDTVIQELA 108


>gi|73668594|ref|YP_304609.1| cobalamin biosynthesis protein [Methanosarcina barkeri str.
          Fusaro]
 gi|72395756|gb|AAZ70029.1| cobalamin biosynthesis protein [Methanosarcina barkeri str.
          Fusaro]
          Length = 220

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G+GKTT I  L   L+++   V
Sbjct: 8  GSGKTTLIRKLVEHLEKQGQTV 29


>gi|57239316|ref|YP_180452.1| adenylate kinase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579282|ref|YP_197494.1| adenylate kinase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161395|emb|CAH58319.1| adenylate kinase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417908|emb|CAI27112.1| Adenylate kinase [Ehrlichia ruminantium str. Welgevonden]
          Length = 220

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 156 SACLD-YFERKDVMIHEKRRQIFLDIARNQ---PDRCHIVDSAHSFQSVATNILNIVWEL 211
              LD  ++ K  +I ++  Q + ++   +    D+   +D+  S   V  +I   +  L
Sbjct: 158 KGRLDYRYDDKIEVIVKRVNQYYEEMKDLELYYHDKIIQIDAGKSIDKVTQDIKERIEYL 217

Query: 212 V 212
           +
Sbjct: 218 I 218


>gi|49475773|ref|YP_033814.1| adenylate kinase [Bartonella henselae str. Houston-1]
 gi|68568771|sp|Q6G2Y6|KAD_BARHE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|49238580|emb|CAF27821.1| Adenylate kinase [Bartonella henselae str. Houston-1]
          Length = 192

 Score = 38.5 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 41/217 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T   +L         + H+ +   G    E  R         E G +A
Sbjct: 3   IVLLGPPGAGKGTQAKMLCE-------EYHIPQLSTGDMLREVIRR------ETEIGKKA 49

Query: 67  EAIVFAAARL-DHVENVIRPALMEGKILLCDRFLDS----SYAYQGERDSSQHLFLDS-- 119
           +A++ A   + D + N I          + DR  +S     +   G   +     +    
Sbjct: 50  KAMINAGTLVSDSIVNQI----------VSDRIDESDCINGFVLDGYPRTVGQAEVLQQV 99

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFL 178
           LQ  ++Q    D  I L +  D  L+R++ R      +      +   V   ++  + + 
Sbjct: 100 LQSKNMQL---DAVIELIVDEDALLERMKKRVQETIIAGGQVRSDDNPVAFAKRLVE-YR 155

Query: 179 D----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209
           +    ++     R    +VD       V+  I  ++ 
Sbjct: 156 EKTAPLSEFYLQRRLLKLVDGMIGVTEVSRKIREVLK 192


>gi|300900322|ref|ZP_07118501.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300931869|ref|ZP_07147166.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300356212|gb|EFJ72082.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300460292|gb|EFK23785.1| conserved hypothetical protein [Escherichia coli MS 187-1]
          Length = 232

 Score = 38.5 bits (89), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 121


>gi|301118468|ref|XP_002906962.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108311|gb|EEY66363.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 419

 Score = 38.5 bits (89), Expect = 0.76,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G   AGKTT +  L  F + + + V+V   P  +   +      L     +      
Sbjct: 42  VLTGGPCAGKTTSLDRLSTFFRDRGFRVYVV--PEASTLLQTGGAFFLDLQEKDILNFQW 99

Query: 68  AIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            I+     L+  ++    A   GK  ++LCDR +    AY       +      L  +++
Sbjct: 100 QILSLQISLE--DSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTL 157

Query: 126 QEVM 129
           ++  
Sbjct: 158 RDTR 161


>gi|229156771|ref|ZP_04284858.1| Phosphoribulokinase/uridine kinase [Bacillus cereus ATCC 4342]
 gi|228626691|gb|EEK83431.1| Phosphoribulokinase/uridine kinase [Bacillus cereus ATCC 4342]
          Length = 219

 Score = 38.5 bits (89), Expect = 0.76,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 62/191 (32%), Gaps = 17/191 (8%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +   +   T +P    +      V+     +E  
Sbjct: 20  IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT-DPYIVSSDIRKHAVIHYTYQNENH 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                    AA            +  G     D +   ++ Y   +  S    +  ++ +
Sbjct: 78  RYKMTACHPAAHHFAALERDIQMVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVEGM 132

Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S   + P   D  I      +  L R  +R      A ++Y  +     HE+RR  +   
Sbjct: 133 SAAFINPDLFDLKIYFYTDGETELMRRTSRDIAERGADINYLRQS----HEERRIQYEVF 188

Query: 181 ARNQPDRCHIV 191
             +   R  I+
Sbjct: 189 MHSYSQRFDII 199


>gi|225022376|ref|ZP_03711568.1| hypothetical protein CORMATOL_02415 [Corynebacterium matruchotii
          ATCC 33806]
 gi|224944889|gb|EEG26098.1| hypothetical protein CORMATOL_02415 [Corynebacterium matruchotii
          ATCC 33806]
          Length = 149

 Score = 38.5 bits (89), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
            I F G+ G GKTT   LL   L+ 
Sbjct: 3  RLIVFAGLPGVGKTTQARLLADALRA 28


>gi|255567152|ref|XP_002524557.1| XPA-binding protein, putative [Ricinus communis]
 gi|223536110|gb|EEF37765.1| XPA-binding protein, putative [Ricinus communis]
          Length = 267

 Score = 38.5 bits (89), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSSLYQHCETVGRSIHIVNLDPAAENFDYPVSMDIRELISLDDVMEELGL 68

Query: 65 EAE-AIVFAAARLD 77
              A+++    L+
Sbjct: 69 GPNGALMYCMDELE 82


>gi|58221325|gb|AAW68305.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221333|gb|AAW68309.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221339|gb|AAW68312.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221343|gb|AAW68314.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221345|gb|AAW68315.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221347|gb|AAW68316.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221349|gb|AAW68317.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221351|gb|AAW68318.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221353|gb|AAW68319.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|58221355|gb|AAW68320.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|193735104|gb|ACF20061.1| regulatory protein [Neisseria gonorrhoeae]
 gi|193735108|gb|ACF20063.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 140

 Score = 38.5 bits (89), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|48477738|ref|YP_023444.1| cytidylate kinase [Picrophilus torridus DSM 9790]
 gi|48430386|gb|AAT43251.1| cytidylate kinase [Picrophilus torridus DSM 9790]
          Length = 174

 Score = 38.5 bits (89), Expect = 0.76,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 45/205 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT   LL   L       H +   GG    + A     +  + EF   +
Sbjct: 3   ITISGKSGSGKTTVGRLLADKL-------HYSFISGGYFFRKKAEE--FNMNLLEFNKYS 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E+        D  + ++        I+L  R L S  AY                  +++
Sbjct: 54  ESHPEIDYEQD--KMLLNFLKNNDNIVLESR-LSSYIAYTN----------------NIE 94

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                  I L    DI  KR+  R         + +  + +         +++      +
Sbjct: 95  AFK----IYLYASDDIRYKRLMERDKTDILTLNERYRSEIL--------RYMEFYGIDYN 142

Query: 187 RC----HIVDSA-HSFQSVATNILN 206
                  I+D+   S   +  +I+ 
Sbjct: 143 NYIYYDIIIDTDKKSPDEIVNDIIE 167


>gi|320164849|gb|EFW41748.1| dephospho-CoA kinase [Capsaspora owczarzaki ATCC 30864]
          Length = 228

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 47/225 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAA----RHVLLS 56
           L I   G    GK+T   +L+  L+    D  +      EPG     +      R +LL 
Sbjct: 2   LLIGLTGGIATGKSTVSKMLQDELKIPVIDADLIARQVVEPGKPAYKQIVQIFGREILLP 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----- 111
                  A  + I   A +   +   + PA+          F      Y           
Sbjct: 62  DQTINRDALGKLIFNDADKRRQLNGAVHPAVFREM------FRQILKCYIRGERIAVLDV 115

Query: 112 ----SQHLFLDSLQEISVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDYFERKD 166
                    L  L+ +          +  D   +   L+R+  R S+ E+        + 
Sbjct: 116 PLLFEGGQLLRYLRRVV--------VVYCD---EQAELQRLMARNSMSEADARSRMNAQ- 163

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + I EKRR      A        ++D++ S ++    +  +  EL
Sbjct: 164 MSIEEKRR-----RAD------IVIDNSGSLEATRNQVRAVFAEL 197


>gi|306816672|ref|ZP_07450804.1| hypothetical protein ECNC101_08639 [Escherichia coli NC101]
 gi|305850237|gb|EFM50696.1| hypothetical protein ECNC101_08639 [Escherichia coli NC101]
          Length = 232

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 65/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L       H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++     +G +L+ DR+         
Sbjct: 72  KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225

Query: 207 IVWELV 212
            +   +
Sbjct: 226 AIHAAL 231


>gi|303236288|ref|ZP_07322881.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
 gi|302483500|gb|EFL46502.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
          Length = 253

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56
           M+  +F++F   +G  G GK+T  +L   +L   K Y+V V        +    R     
Sbjct: 1   MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 54

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E G    +  F A   DH   + +                   AY   + ++ +  
Sbjct: 55  ---HEMGLIDSSTYFKALACDHFRRMKKN------------------AYTIVKSNAVNAL 93

Query: 117 LDSLQEISVQEVMPDCTIILDLP 139
            D+ + I+ ++V PD  +  D+P
Sbjct: 94  DDAERMIATEDVKPD-VVFFDMP 115


>gi|256158549|ref|ZP_05456443.1| ABC transporter related protein [Brucella ceti M490/95/1]
 gi|265997065|ref|ZP_06109622.1| ABC transporter [Brucella ceti M490/95/1]
 gi|262551533|gb|EEZ07523.1| ABC transporter [Brucella ceti M490/95/1]
          Length = 184

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|254691447|ref|ZP_05154701.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella abortus bv. 6 str. 870]
 gi|256256632|ref|ZP_05462168.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella abortus bv. 9 str. C68]
 gi|260757067|ref|ZP_05869415.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 6 str. 870]
 gi|260882877|ref|ZP_05894491.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 9 str. C68]
 gi|297249988|ref|ZP_06933689.1| spermidine/putrescine transport system ATP-binding protein
           [Brucella abortus bv. 5 str. B3196]
 gi|260677175|gb|EEX63996.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 6 str. 870]
 gi|260872405|gb|EEX79474.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 9 str. C68]
 gi|297173857|gb|EFH33221.1| spermidine/putrescine transport system ATP-binding protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPDDGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|241894782|ref|ZP_04782078.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Weissella paramesenteroides ATCC 33313]
 gi|241871994|gb|EER75745.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Weissella paramesenteroides ATCC 33313]
          Length = 378

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +G F +  G  G+GKTT + L+  FL+  + D+  
Sbjct: 38 AGKFYTLLGPSGSGKTTILRLIAGFLEATSGDILF 72


>gi|227822695|ref|YP_002826667.1| putative ATP-binding component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227341696|gb|ACP25914.1| putative ATP-binding component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 26/165 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEAARHVLLS 56
            G F+SF G  G GKTT + ++  F    N  + +      T +P         +   L 
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETPSNGKIVIDGTDQGTLKPNQRNIGMVFQAYALF 87

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSS 112
             ++     A  +  A A    ++  ++  L    ++    L DRF      YQ      
Sbjct: 88  PNMNVQDNVAFGLKVAGASKADIDTRVKQML---GLIKLEHLADRFP-----YQLSGGQQ 139

Query: 113 QHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRE 155
           Q + L          V P   ++LD  L       R+  R  +R+
Sbjct: 140 QRVALAR-----ALAVKPQ-VLLLDEPLSALDAKIRISLREEIRQ 178


>gi|255086209|ref|XP_002509071.1| predicted protein [Micromonas sp. RCC299]
 gi|226524349|gb|ACO70329.1| predicted protein [Micromonas sp. RCC299]
          Length = 182

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 32/122 (26%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG  +   G+  +GK+T  + L   L+ K   V V  EP           + L       
Sbjct: 5   SGCLVIMCGVPCSGKSTAAAELASALREKGIRVTVVDEPS----------LHLHRNAGYA 54

Query: 63  GAEAE-----AIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGER 109
               E      +     R  H          +G +++ D        R+     A Q   
Sbjct: 55  NGHVEKNTRGLLKATVDRSLH---------RDGPVVIVDACNGIKGYRYELWCIARQVGA 105

Query: 110 DS 111
            S
Sbjct: 106 RS 107


>gi|46255248|ref|YP_006160.1| transporter [Thermus thermophilus HB27]
 gi|46198097|gb|AAS82507.1| transporter [Thermus thermophilus HB27]
          Length = 259

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDE 61
           G F++  G  G+GKTT + LL   L+    +V +  E      P A A +  +LS   + 
Sbjct: 27  GEFLAVLGPNGSGKTTLLRLLAGELRPTEGEVFLLGESLAVYGPQALARQRAVLSQVREM 86

Query: 62  FGAEAEAIVFAAARLDHVENVIRP 85
                   V    RL H+    RP
Sbjct: 87  AFPYTAYEVAFLGRLPHLVGRERP 110


>gi|40253763|dbj|BAD05702.1| putative RGH1A [Oryza sativa Japonica Group]
          Length = 978

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAEAEAI 69
           GI G GKTT +  +   L+   +D       G  P  +   R +++      +      +
Sbjct: 202 GIGGLGKTTLVKAVYEKLK-PGFDCGAFVPVGQNPDMKKVLRDIIIDLDKKTYTDFNITL 260

Query: 70  VFAAARLDHVENVIRPALMEGKILLCD 96
                    + N ++  L E +I++ D
Sbjct: 261 F---DERQLI-NKLQEILQEKRIVIDD 283


>gi|326516440|dbj|BAJ92375.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 203

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 36/156 (23%)

Query: 6   FISF-EGIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCG 58
           FI+F  G  G+GK T  S +        +       + R     GT   E    ++    
Sbjct: 60  FIAFVLGGPGSGKGTQCSRIASDF---GFSHVSAGDLLRNEISSGTDQGEWILEIIREGR 116

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +            +   ++ V   I                 SS A +   D       +
Sbjct: 117 IVP----------SEITVELVRKAIE----------------SSTAKRVLIDGFPRCEEN 150

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
            +    +    PD  +  D P D  +KR+ +R   R
Sbjct: 151 RIAFEKITGTEPDLVLFFDCPEDEMVKRLLSRNQGR 186


>gi|312865141|ref|ZP_07725369.1| ABC transporter, ATP-binding protein [Streptococcus downei F0415]
 gi|311099252|gb|EFQ57468.1| ABC transporter, ATP-binding protein [Streptococcus downei F0415]
          Length = 251

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          N G FI+  G  G+GKTT + ++ R L+
Sbjct: 25 NKGEFITILGTSGSGKTTTLKMINRLLE 52


>gi|257470027|ref|ZP_05634119.1| guanylate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|317064252|ref|ZP_07928737.1| guanylate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|313689928|gb|EFS26763.1| guanylate kinase [Fusobacterium ulcerans ATCC 49185]
          Length = 185

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M  G      G  GAGK+T   L+++ L         TREP
Sbjct: 1  MPKGNLYVVSGPSGAGKSTICRLVRKMLGINLATSATTREP 41


>gi|254774818|ref|ZP_05216334.1| hypothetical protein MaviaA2_09125 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 535

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 60/205 (29%), Gaps = 38/205 (18%)

Query: 11  GIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G+  +GKTT    L     L   + DV   R  G  P    +                  
Sbjct: 357 GLPASGKTTLARALAGRLGLVHLSSDVARKRMAGIPPTRRGSDEFGSGLYNPAMTRNT-- 414

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
             +AA R D         L  G  ++ D                       L++++ +  
Sbjct: 415 --YAALRRDAAR-----WLRRGHGVVVD------------ATFGNPGERAQLRQLAHRLG 455

Query: 129 MPDCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD- 186
           + D  ++L D   D  + R++ R + +        E     +  + R  F       PD 
Sbjct: 456 V-DLHLVLCDADDDTLIARLKRRATEQGVVSDARIE-----LWPQLRAAF-----TPPDE 504

Query: 187 --RCHIVDSAHSFQSVATNILNIVW 209
                 VD+    +      L ++ 
Sbjct: 505 QASVLRVDATRDTEETVEQALGLLR 529


>gi|148822503|ref|YP_001287257.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis F11]
 gi|148721030|gb|ABR05655.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase subunit 1
           + adenylylsulfate kinase [Mycobacterium tuberculosis
           F11]
          Length = 614

 Score = 38.5 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  + F G+ G+GK++   L++R L  K    +                 +L       
Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484

Query: 63  GAEAEAIVFAAARLDHVENV 82
           G  A+     A R +++  +
Sbjct: 485 GLNADLGFSMADRAENLRRL 504


>gi|326927397|ref|XP_003209879.1| PREDICTED: thymidine kinase 2, mitochondrial-like [Meleagris
           gallopavo]
          Length = 340

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 60/187 (32%), Gaps = 33/187 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFG 63
            I  EG   +GKTT +    +     + +V    EP          ++  L+      +G
Sbjct: 127 LICIEGNIASGKTTCLDYFAQT---TSIEVLT--EPVSKWRNVRGHNILGLMYQDASRWG 181

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDSSQH-- 114
              +  +       H + +I P      + + +R + S       +    G+     +  
Sbjct: 182 ITLQTYIQLTMLEQHTKPMISP------VRMMERSIHSAKYIFVENLYRSGKMPEVDYVV 235

Query: 115 --LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
              + D +Q  +    + D  + L     +  +R++ R    E           +   E 
Sbjct: 236 LSEWFDWIQN-NTDVSV-DLIVYLQTSPKVCYERLKRRCREEEKIIP-------LEYLEA 286

Query: 173 RRQIFLD 179
             Q++ +
Sbjct: 287 IHQLYEE 293


>gi|301629209|ref|XP_002943739.1| PREDICTED: alpha-glucoside transport ATP-binding protein
          AglK-like [Xenopus (Silurana) tropicalis]
          Length = 346

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + L+ 
Sbjct: 26 IKKGEFIVFVGPSGCGKSTLLRLIA 50


>gi|297661753|ref|XP_002809388.1| PREDICTED: guanylate kinase-like isoform 3 [Pongo abelii]
 gi|297661755|ref|XP_002809389.1| PREDICTED: guanylate kinase-like isoform 4 [Pongo abelii]
 gi|297661757|ref|XP_002809390.1| PREDICTED: guanylate kinase-like isoform 5 [Pongo abelii]
          Length = 197

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 68/223 (30%), Gaps = 41/223 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M+    +   G  GAGK+T +  L +       + V H TR P                G
Sbjct: 1   MSGPRPVVLSGPSGAGKSTLLKRLFQEHSGIFGFSVSHTTRNPR--------------PG 46

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +              R     + I  A   G +     +  S  A Q  +  ++   LD
Sbjct: 47  EENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRICVLD 101

Query: 119 S----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                ++ I   ++ P   I + + P    +  +R++ R +  E +           +  
Sbjct: 102 VDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRRRNTETEESLAKRLAAAQADME- 157

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                    +  +P    +V    S       +   + E ++K
Sbjct: 158 ---------SSKEPGLFDVVIVNDSLDQAYAELKEALSEEIKK 191


>gi|297203557|ref|ZP_06920954.1| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC
           29083]
 gi|297148441|gb|EDY58568.2| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC
           29083]
          Length = 540

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 11/76 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-------REPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + L+   L+     V V+       +  G        R +L+S       
Sbjct: 37  GPNGAGKTTLLRLISGELKPHGGTVTVSGGLGVMRQFVGSVRDETTVRDLLVSVAPPRIQ 96

Query: 64  AEAEAIVFAAARLDHV 79
             A+A+     R +H+
Sbjct: 97  EAAQAV----DRAEHL 108


>gi|296331136|ref|ZP_06873610.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674291|ref|YP_003865963.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151780|gb|EFG92655.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412535|gb|ADM37654.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 197

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                 ++L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
               R +++     V +  + +G I++ 
Sbjct: 76  SDEDRKENIRRIGEVAKLFVQQGTIVIT 103


>gi|294994843|ref|ZP_06800534.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis 210]
          Length = 614

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  + F G+ G+GK++   L++R L  K    +                 +L       
Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484

Query: 63  GAEAEAIVFAAARLDHVENV 82
           G  A+     A R +++  +
Sbjct: 485 GLNADLGFSMADRAENLRRL 504


>gi|284162041|ref|YP_003400664.1| hypothetical protein Arcpr_0930 [Archaeoglobus profundus DSM
          5631]
 gi|284012038|gb|ADB57991.1| protein of unknown function ATP binding protein [Archaeoglobus
          profundus DSM 5631]
          Length = 232

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 3/92 (3%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I   G  G+GK+T +     +L+  N  V    +P   P   A R +      ++   + 
Sbjct: 3  IVVVGPAGSGKSTFVKNFSEYLKEYNVKVVNL-DPASDPIYRADRDIREFVRTEDVMKKF 61

Query: 67 EAIVFAAAR--LDHVENVIRPALMEGKILLCD 96
          +  +  A    ++     I   ++EG  ++ D
Sbjct: 62 KLGINGALLKSIELSLEHIDELMLEGDYIIYD 93


>gi|222086488|ref|YP_002545022.1| ABC transporter [Agrobacterium radiobacter K84]
 gi|221723936|gb|ACM27092.1| ABC transporter [Agrobacterium radiobacter K84]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 30/169 (17%)

Query: 1   MN--SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAAR 51
           M+   G FISF G  G GKTT + ++  F       L     D    + P         +
Sbjct: 24  MHIEKGEFISFLGPSGCGKTTVLRMIAGFESPTAGTLTINGKDQRPLK-PNQRNIGMVFQ 82

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQG 107
              L   +      A  +  A      ++  ++  L    ++    L DR+      YQ 
Sbjct: 83  AYALFPNMTVHDNVAFGLKVAGMAKPDIDKRVKEML---GLIKLDHLADRYP-----YQM 134

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                Q + L   + I+   V P   ++LD  L       RV  R  +R
Sbjct: 135 SGGQQQRVALA--RAIA---VKPQ-VLLLDEPLSALDAKIRVSLREEIR 177


>gi|224004492|ref|XP_002295897.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209585929|gb|ACI64614.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 350

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 6/103 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GKTT ++ L  +L+ + ++V    E      +       L   VD   A  
Sbjct: 29  IVLTGGPCGGKTTSLARLSPYLRERGFEVITCPEAFSLLVSNGMAFDYL-GAVDGMSAVV 87

Query: 67  EAIVFAAARLDHVENVIRPAL-MEGK--ILLCDRFLDSSYAYQ 106
           +  V        +E+     L   GK  +LLCDR L    AY 
Sbjct: 88  QDTVM--DIQIGLEDGFERVLRARGKPAVLLCDRGLMDGSAYM 128


>gi|163840884|ref|YP_001625289.1| adenylate kinase [Renibacterium salmoninarum ATCC 33209]
 gi|259494014|sp|A9WST7|KAD_RENSM RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|162954360|gb|ABY23875.1| adenylate kinase [Renibacterium salmoninarum ATCC 33209]
          Length = 193

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 54/224 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE------PGGTPAAEAARHVL 54
           M   + I   G  G+GK T    +   L         T +       G TP    A+  +
Sbjct: 1   MTR-MLIV--GPPGSGKGTQAEWISDRL---GIVAISTGDIFRANVKGETPLGLEAKKYM 54

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 ++  ++        RL   E+V    L++G                  R S+Q 
Sbjct: 55  ---DAGDYVPDSVTNKMVRDRLQQ-EDVQHGFLLDGY----------------PRTSAQV 94

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             LD +  +S      D  + L    +  ++R+  R      +  D          EK  
Sbjct: 95  NELDDI--LSAGGEKLDVVLQLTADDEELVRRLLGRAKESGRSDDD----------EKVI 142

Query: 175 QIFLDIARNQPDRCHI----------VDSAHSFQSVATNILNIV 208
           +  L++   Q +   +          VD   +   V   I+  +
Sbjct: 143 RHRLNLYHTQTEAVVVRYQKLGLLAKVDGIGAIDEVTDRIMAAI 186


>gi|147733507|sp|Q4UKH4|SRP54_RICFE RecName: Full=Signal recognition particle protein; AltName:
           Full=Fifty-four homolog
          Length = 449

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|123473452|ref|XP_001319914.1| Adenylate kinase family protein [Trichomonas vaginalis G3]
 gi|121902708|gb|EAY07691.1| Adenylate kinase family protein [Trichomonas vaginalis G3]
          Length = 206

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 134 IILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + +D+P +   KR+ NR   S R     +  +++ V  H +   +         ++   V
Sbjct: 121 LFIDVPDEELKKRLLNRGLSSGRIDDNEESIKKRLVTYHNQTEAVIGKF--RSENKIISV 178

Query: 192 DSAHSFQSVATNI---LNIVWELVQKR 215
           D  H   +V  +I   L  +W  ++K+
Sbjct: 179 DGNHPIDAVHDDIVVQLKKLWTDLEKK 205


>gi|90414436|ref|ZP_01222412.1| adenylylsulfate kinase [Photobacterium profundum 3TCK]
 gi|90324441|gb|EAS41000.1| adenylylsulfate kinase [Photobacterium profundum 3TCK]
          Length = 208

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 40/144 (27%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G   + 
Sbjct: 39  FTGLSGAGKSTVAGALENRLVELGYHTY-----------------LLDGDNVRHGLCRDL 81

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              +  R +++     V +     G I+L         A+     + + L         V
Sbjct: 82  GFSSEDRRENIRRIGEVAKLMADAGLIVLS--------AFISPHRAERQL---------V 124

Query: 126 QEVMPD---CTIILDLPVDIGLKR 146
           ++++PD     + +D  +D+  KR
Sbjct: 125 KDLLPDGEFIEVFVDASLDVCEKR 148


>gi|15608426|ref|NP_215802.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis H37Rv]
 gi|15840734|ref|NP_335771.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis CDC1551]
 gi|121637214|ref|YP_977437.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661073|ref|YP_001282596.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis H37Ra]
 gi|167969610|ref|ZP_02551887.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis H37Ra]
 gi|215403125|ref|ZP_03415306.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis 02_1987]
 gi|215410922|ref|ZP_03419730.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis 94_M4241A]
 gi|215426605|ref|ZP_03424524.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis T92]
 gi|215430170|ref|ZP_03428089.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis EAS054]
 gi|215445462|ref|ZP_03432214.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis T85]
 gi|218752990|ref|ZP_03531786.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis GM 1503]
 gi|219557184|ref|ZP_03536260.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis T17]
 gi|224989689|ref|YP_002644376.1| sulfate adenylyltransferase subunit 1 [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253799669|ref|YP_003032670.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis KZN 1435]
 gi|254231543|ref|ZP_04924870.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit
           1) + adenylylsulfate kinase [Mycobacterium tuberculosis
           C]
 gi|254364182|ref|ZP_04980228.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit
           1) + adenylylsulfate kinase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254550292|ref|ZP_05140739.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186222|ref|ZP_05763696.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis CPHL_A]
 gi|260200336|ref|ZP_05767827.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis T46]
 gi|260204541|ref|ZP_05772032.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis K85]
 gi|289442724|ref|ZP_06432468.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis T46]
 gi|289446880|ref|ZP_06436624.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis CPHL_A]
 gi|289554925|ref|ZP_06444135.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis KZN 605]
 gi|289569295|ref|ZP_06449522.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis T17]
 gi|289573948|ref|ZP_06454175.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis K85]
 gi|289745031|ref|ZP_06504409.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis 02_1987]
 gi|289749838|ref|ZP_06509216.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis T92]
 gi|289753362|ref|ZP_06512740.1| sulfate adenylate transferase [Mycobacterium tuberculosis EAS054]
 gi|289757385|ref|ZP_06516763.1| sulfate adenylate transferase [Mycobacterium tuberculosis T85]
 gi|289761440|ref|ZP_06520818.1| sulfate adenyltransferase (subunit 1) [Mycobacterium tuberculosis
           GM 1503]
 gi|297633835|ref|ZP_06951615.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis KZN 4207]
 gi|297730822|ref|ZP_06959940.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis KZN R506]
 gi|298524789|ref|ZP_07012198.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775454|ref|ZP_07413791.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu001]
 gi|306781633|ref|ZP_07419970.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu002]
 gi|306784007|ref|ZP_07422329.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu003]
 gi|306788370|ref|ZP_07426692.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu004]
 gi|306792697|ref|ZP_07430999.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu005]
 gi|306797103|ref|ZP_07435405.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu006]
 gi|306802983|ref|ZP_07439651.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu008]
 gi|306971564|ref|ZP_07484225.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu010]
 gi|307079277|ref|ZP_07488447.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu011]
 gi|307083847|ref|ZP_07492960.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu012]
 gi|313658154|ref|ZP_07815034.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis KZN V2475]
 gi|1706274|sp|Q10600|CYSNC_MYCTU RecName: Full=Bifunctional enzyme CysN/CysC; Includes: RecName:
           Full=Sulfate adenylyltransferase subunit 1; AltName:
           Full=ATP-sulfurylase large subunit; AltName:
           Full=Sulfate adenylate transferase; Short=SAT; Includes:
           RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase
 gi|1322410|emb|CAA97752.1| PROBABLE BIFUNCTIONAL ENZYME CYSN/CYSC: SULFATE ADENYLTRANSFERASE
           (SUBUNIT 1) + ADENYLYLSULFATE KINASE [Mycobacterium
           tuberculosis H37Rv]
 gi|13880925|gb|AAK45585.1| sulfate adenylate transferase, subunit 1 [Mycobacterium
           tuberculosis CDC1551]
 gi|121492861|emb|CAL71332.1| Probable bifunctional enzyme cysN/cysC: sulfate adenyltransferase
           (subunit 1) + adenylylsulfate kinase [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|124600602|gb|EAY59612.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit
           1) + adenylylsulfate kinase [Mycobacterium tuberculosis
           C]
 gi|134149696|gb|EBA41741.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit
           1) + adenylylsulfate kinase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148505225|gb|ABQ73034.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium tuberculosis H37Ra]
 gi|224772802|dbj|BAH25608.1| sulfate adenylyltransferase subunit 1 [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253321172|gb|ACT25775.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis KZN 1435]
 gi|289415643|gb|EFD12883.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis T46]
 gi|289419838|gb|EFD17039.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis CPHL_A]
 gi|289439557|gb|EFD22050.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis KZN 605]
 gi|289538379|gb|EFD42957.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis K85]
 gi|289543049|gb|EFD46697.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis T17]
 gi|289685559|gb|EFD53047.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis 02_1987]
 gi|289690425|gb|EFD57854.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis T92]
 gi|289693949|gb|EFD61378.1| sulfate adenylate transferase [Mycobacterium tuberculosis EAS054]
 gi|289708946|gb|EFD72962.1| sulfate adenyltransferase (subunit 1) [Mycobacterium tuberculosis
           GM 1503]
 gi|289712949|gb|EFD76961.1| sulfate adenylate transferase [Mycobacterium tuberculosis T85]
 gi|298494583|gb|EFI29877.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216074|gb|EFO75473.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu001]
 gi|308325594|gb|EFP14445.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu002]
 gi|308331242|gb|EFP20093.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu003]
 gi|308335058|gb|EFP23909.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu004]
 gi|308338866|gb|EFP27717.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu005]
 gi|308342551|gb|EFP31402.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu006]
 gi|308350357|gb|EFP39208.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu008]
 gi|308358934|gb|EFP47785.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu010]
 gi|308362897|gb|EFP51748.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu011]
 gi|308366482|gb|EFP55333.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis SUMu012]
 gi|323720242|gb|EGB29341.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis CDC1551A]
 gi|326902907|gb|EGE49840.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis W-148]
 gi|328459415|gb|AEB04838.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase
           cysN/cysC [Mycobacterium tuberculosis KZN 4207]
          Length = 614

 Score = 38.5 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  + F G+ G+GK++   L++R L  K    +                 +L       
Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484

Query: 63  GAEAEAIVFAAARLDHVENV 82
           G  A+     A R +++  +
Sbjct: 485 GLNADLGFSMADRAENLRRL 504


>gi|332020743|gb|EGI61147.1| Putative adenylate kinase isoenzyme F38B2.4 [Acromyrmex echinatior]
          Length = 197

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 39/210 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE--- 67
           G  G GK T    +   +++  +            + +  R  + S        +A    
Sbjct: 8   GGPGCGKGTQCDRI---IEKYGF--------LHLSSGDLLRAEVASGSERGASLQALMSK 56

Query: 68  -AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
              V     L+ ++  +  A  EG          + +   G         L        +
Sbjct: 57  GLFVPTDIVLELIKEQMDKAREEGT-------TKTGFLIDGYPREKDQGILFE------E 103

Query: 127 EVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIA 181
           +V P D  I  D+  D   KR+  R ++ + A  +          +KR +IF     +I 
Sbjct: 104 KVCPVDLIIFFDVANDTLEKRLLGRAAMSQRADDN------EETIKKRIEIFNGKNNEIV 157

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               D+   +++  +   +   +      L
Sbjct: 158 EYYKDKVIRINAEGTVDEIFAEVTKAFDTL 187


>gi|323465307|gb|ADX77460.1| deoxyadenosIne kinase [Staphylococcus pseudintermedius ED99]
          Length = 221

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 28/176 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK++    +   L  +            T       +  L     +F   +
Sbjct: 12  ITIAGTVGVGKSSLTRAIAEKLNFR------------TSYENVEHNPYLDKFYHDFKRWS 59

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFLDS 119
             +       +  +   R     G  +  DR +          +  QG           +
Sbjct: 60  FHLQMY-FLAERFKEQKRMFEYGGGFV-QDRSIYEDVDIFAKMHVEQGTMTPEDFKTYSN 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHE 171
           L E   ++     PD  I L+   +  L+R+Q R    E     +Y+E   ++   
Sbjct: 118 LFEAMVLTPYFPKPDVLIYLESDYEAVLERIQARGRQMEIETNPEYWE---MLFQR 170


>gi|239999853|ref|ZP_04719777.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           35/02]
 gi|268595664|ref|ZP_06129831.1| signal recognition particle protein [Neisseria gonorrhoeae 35/02]
 gi|268549053|gb|EEZ44471.1| signal recognition particle protein [Neisseria gonorrhoeae 35/02]
          Length = 417

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNITVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|154685976|ref|YP_001421137.1| hypothetical protein RBAM_015430 [Bacillus amyloliquefaciens FZB42]
 gi|166221083|sp|A7Z4I0|CYSC_BACA2 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|154351827|gb|ABS73906.1| CysC [Bacillus amyloliquefaciens FZB42]
          Length = 197

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                 ++L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R +++     V +  + +G I++         A+       +    + + E    E
Sbjct: 76  SDDDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRDQVRELVAEGEFNE 127

Query: 128 VMPDCTIILDLPVDIGLKR 146
                 I +   +DI  KR
Sbjct: 128 ------IYVKCDLDICEKR 140


>gi|31792478|ref|NP_854971.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium bovis AF2122/97]
 gi|31618067|emb|CAD94178.1| PROBABLE BIFUNCTIONAL ENZYME CYSN/CYSC: SULFATE ADENYLTRANSFERASE
           (SUBUNIT 1) + ADENYLYLSULFATE KINASE [Mycobacterium
           bovis AF2122/97]
          Length = 614

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  + F G+ G+GK++   L++R L  K    +                 +L       
Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484

Query: 63  GAEAEAIVFAAARLDHVENV 82
           G  A+     A R +++  +
Sbjct: 485 GLNADLGFSMADRAENLRRL 504


>gi|258646934|ref|ZP_05734403.1| dethiobiotin synthase [Dialister invisus DSM 15470]
 gi|260404375|gb|EEW97922.1| dethiobiotin synthase [Dialister invisus DSM 15470]
          Length = 222

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 1  MNSGLFISFEGIEG-AGKTTHISLLKRFLQRKNYDV 35
          M  GLFI+  G +   GKT   +LL + L+   YDV
Sbjct: 1  MGRGLFIT--GTDTDVGKTYVTALLVKTLRSAGYDV 34


>gi|240169537|ref|ZP_04748196.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium kansasii ATCC 12478]
          Length = 616

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 19/88 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK++  + +++ L       +                 +L       G  A+ 
Sbjct: 450 FTGLSGAGKSSVATRVEQKLLESGVPAY-----------------VLDGDNLRHGLNADL 492

Query: 69  IVFAAARLDHVENVIRPA--LMEGKILL 94
               A R +++  +   A  L +   ++
Sbjct: 493 GFSMADRAENLRRLAHVAVLLADCGHVV 520


>gi|257065010|ref|YP_003144682.1| Adenylate kinase [Slackia heliotrinireducens DSM 20476]
 gi|256792663|gb|ACV23333.1| Adenylate kinase [Slackia heliotrinireducens DSM 20476]
          Length = 208

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 67/231 (29%), Gaps = 60/231 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLSCGVDEFGA 64
           I   G  GAGK T  + L               E G       +  R  +      E G 
Sbjct: 3   IVLLGAPGAGKGTQAAKLVA-------------EYGTAHISTGDILRAAVRDQ--TELGK 47

Query: 65  EAEAIVFAAAR------LDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +A+A + A         +D + E + +P    G   + D F  ++   Q     +    +
Sbjct: 48  QAKAFMDAGDLVPDSLIIDLMNERLQQPDCETGF--ILDGFPRTTA--QAVALDALLSEI 103

Query: 118 DSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA----CLDY--------FER 164
                       P D  +++D+  ++ +KR+  R   ++        D           +
Sbjct: 104 K----------RPLDAALLVDVDPEVIVKRLSARRCCKDCGNIGTAADASCPKCGGEMYQ 153

Query: 165 KDVMIHEKRRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILN 206
           +D       R      A+            D    VD       V  ++  
Sbjct: 154 RDDDNEATVRNRLDVYAKSTAPLVDYYRGKDLLISVDGDRPVDDVYADVKK 204


>gi|227887692|ref|ZP_04005497.1| lipoprotein [Escherichia coli 83972]
 gi|227835088|gb|EEJ45554.1| lipoprotein [Escherichia coli 83972]
          Length = 237

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L       H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 77  KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 135

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 136 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 186

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 187 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 230

Query: 207 IVWELV 212
            +   +
Sbjct: 231 AIQAAL 236


>gi|159122552|gb|EDP47673.1| ABC multidrug transporter, putative [Aspergillus fumigatus A1163]
          Length = 1216

 Score = 38.5 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F++F G  G GK+T I+LL RF      Y     R        +  R + L
Sbjct: 995  GKFVAFVGPSGCGKSTMINLLARFYDPTSGYIAVNDRPIHDLSPQDHRRRLAL 1047


>gi|313239246|emb|CBY14199.1| unnamed protein product [Oikopleura dioica]
          Length = 606

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 17/74 (22%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
          F G+ GAGK+T    L+  L  K    +                 +L       G   + 
Sbjct: 38 FTGLSGAGKSTIAMKLEEHLIAKGVPAY-----------------VLDGDNVRHGLNKDL 80

Query: 69 IVFAAARLDHVENV 82
              A R +++  +
Sbjct: 81 GFSLADREENIRRI 94


>gi|294667066|ref|ZP_06732292.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603158|gb|EFF46583.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 658

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 590 --------VFVDVPLAVAEAR 602


>gi|312111706|ref|YP_003990022.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           Y4.1MC1]
 gi|311216807|gb|ADP75411.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           Y4.1MC1]
          Length = 330

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    +  GAE 
Sbjct: 123 ILFVGVNGVGKTTTIGKLAHKLKSEGKTVMLAA--GDTFRAGAIEQ--LEVWGERVGAEV 178

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
                 +     + + I+ A   G  +LLCD
Sbjct: 179 IKQTAGSDPAAVIYDAIQAAKARGADVLLCD 209


>gi|291614826|ref|YP_003524983.1| signal recognition particle-docking protein FtsY [Sideroxydans
           lithotrophicus ES-1]
 gi|291584938|gb|ADE12596.1| signal recognition particle-docking protein FtsY [Sideroxydans
           lithotrophicus ES-1]
          Length = 315

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  Q +   V +     G     AAR  L+  G            
Sbjct: 119 GVNGAGKTTSIGKLAKHFQNQGKSVLLA---AGDTFRAAAREQLMEWG--RRNDVTVIAQ 173

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
            +      + + ++ A   G  ++L D
Sbjct: 174 QSGDAAAVIYDAVQAAQARGIDVVLAD 200


>gi|254700687|ref|ZP_05162515.1| ABC transporter related protein [Brucella suis bv. 5 str. 513]
          Length = 186

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|261856095|ref|YP_003263378.1| adenylylsulfate kinase [Halothiobacillus neapolitanus c2]
 gi|261836564|gb|ACX96331.1| adenylylsulfate kinase [Halothiobacillus neapolitanus c2]
          Length = 198

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L ++                   R  LL       G  ++ 
Sbjct: 29  FTGLSGSGKSTIAGALEHALFQQGQ-----------------RTYLLDGDNVRHGLNSDL 71

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R++++     V +  +  G I+L 
Sbjct: 72  GFSDADRVENIRRIGEVAKLMVDAGLIVLA 101


>gi|170291202|ref|YP_001738018.1| GTP-binding signal recognition particle [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170175282|gb|ACB08335.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 437

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 18/126 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GIEG+GKTT ++ L  +L ++   V +       PA++     L+   +  F  E++   
Sbjct: 108 GIEGSGKTTTVAKLAFWLSKRFGKVGIISADVMRPASKLQIEQLVGPDIPVFSKESK--- 164

Query: 71  FAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                ++ +   I          ++ D            R   +   +  L   + +E+ 
Sbjct: 165 ---DPVEIMREGIEFFKRERYNFVIID---------TAGRHKDESSLMSELD--AYREIG 210

Query: 130 PDCTII 135
           PD  I+
Sbjct: 211 PDLVIL 216


>gi|148244853|ref|YP_001219547.1| cell division transporter substrate-binding protein FtsY
           [Candidatus Vesicomyosocius okutanii HA]
 gi|146326680|dbj|BAF61823.1| cell division transporter substrate-binding protein FtsY
           [Candidatus Vesicomyosocius okutanii HA]
          Length = 319

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  Q +   V +    G T  A A   + +    +     A+ + 
Sbjct: 124 GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVVAKTL- 180

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +  + A  +   ILL D
Sbjct: 181 -GADTASVIFDAYQSAQAKNIDILLAD 206


>gi|62317068|ref|YP_222921.1| spermidine/putrescine ABC transporter ATP-binding protein [Brucella
           abortus bv. 1 str. 9-941]
 gi|83269061|ref|YP_418352.1| spermidine/putrescine ABC transporter ATPase [Brucella melitensis
           biovar Abortus 2308]
 gi|189022333|ref|YP_001932074.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella abortus S19]
 gi|237816628|ref|ZP_04595620.1| polyamine ABC transporter, ATP-binding protein [Brucella abortus
           str. 2308 A]
 gi|254698355|ref|ZP_05160183.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731799|ref|ZP_05190377.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella abortus bv. 4 str. 292]
 gi|260544304|ref|ZP_05820125.1| spermidine/putrescine ABC transporter [Brucella abortus NCTC 8038]
 gi|260759563|ref|ZP_05871911.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 4 str. 292]
 gi|260762808|ref|ZP_05875140.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|62197261|gb|AAX75560.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939335|emb|CAJ12276.1| Disease resistance protein:ATP/GTP-binding site motif A
           (P-loop):ABC transporter:AAA
           ATPase:Spermidine/putrescine ABC transpo [Brucella
           melitensis biovar Abortus 2308]
 gi|189020907|gb|ACD73628.1| spermidine/putrescine ABC transporter, ATP-binding protein
           [Brucella abortus S19]
 gi|237787441|gb|EEP61657.1| polyamine ABC transporter, ATP-binding protein [Brucella abortus
           str. 2308 A]
 gi|260097575|gb|EEW81449.1| spermidine/putrescine ABC transporter [Brucella abortus NCTC 8038]
 gi|260669881|gb|EEX56821.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 4 str. 292]
 gi|260673229|gb|EEX60050.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella
           abortus bv. 2 str. 86/8/59]
          Length = 353

 Score = 38.5 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   R P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFETSDDGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86

Query: 56  SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
              +                  E  A  + ++ +  RLDH               L DR+
Sbjct: 87  FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
                 YQ      Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|326385853|ref|ZP_08207480.1| hypothetical protein Y88_2909 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209642|gb|EGD60432.1| hypothetical protein Y88_2909 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 812

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 5/64 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA--EAARHVLLSCGVDEF 62
           + I   G  GAGKTT +  L    + +     V    G    A  E  R  +L+      
Sbjct: 243 MLI---GTTGAGKTTQLRKLVTEARERGQRCVVFDLTGAFVEAFYEEGRDHILNPMDQRC 299

Query: 63  GAEA 66
               
Sbjct: 300 PPWT 303


>gi|292491576|ref|YP_003527015.1| cytoplasmic protein [Nitrosococcus halophilus Nc4]
 gi|291580171|gb|ADE14628.1| putative cytoplasmic protein [Nitrosococcus halophilus Nc4]
          Length = 451

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 19/130 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     L + L++K   V V R P   P  + A+  +             A + AA
Sbjct: 136 GCGKSQTSRWLSQLLRKKGLQVAVIRHP--MPYGDLAQQAVQRFATP-------ADLEAA 186

Query: 74  ARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                      P L  G ++    +     +    Q E ++   L+     +     + P
Sbjct: 187 HCTIEEREEYEPHLAAGNVV----YAGIDYAQILAQAEGEADVILWDGGNNDF--PFIRP 240

Query: 131 DCTIILDLPV 140
           D  I+L +  
Sbjct: 241 DLHIVL-VDP 249


>gi|257440331|ref|ZP_05616086.1| cobalamin biosynthesis protein CbiD [Faecalibacterium prausnitzii
           A2-165]
 gi|257197177|gb|EEU95461.1| cobalamin biosynthesis protein CbiD [Faecalibacterium prausnitzii
           A2-165]
          Length = 638

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 1/65 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  GAGK+T +  L   L  +   V +  R          AR + L              
Sbjct: 37  GPNGAGKSTLLKTLAGQLAPQGGAVLLDGRSLTDYTGTARARKLALMLPHTRRTELTSCF 96

Query: 70  VFAAA 74
            FAAA
Sbjct: 97  EFAAA 101


>gi|226482300|emb|CAX73749.1| guanylate kinase [Schistosoma japonicum]
          Length = 107

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 8  SFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
           F G  GAGK+T + +L         + V H TR+P
Sbjct: 8  VFSGPSGAGKSTVLQMLMEKFPNNFGFSVSHTTRKP 43


>gi|163803406|ref|ZP_02197281.1| cell division protein FtsY [Vibrio sp. AND4]
 gi|159172810|gb|EDP57655.1| cell division protein FtsY [Vibrio sp. AND4]
          Length = 410

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 213 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 268

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 269 TGADSASVIFDAIEAAKARGVDVVIAD 295


>gi|158334995|ref|YP_001516167.1| hypothetical protein AM1_1833 [Acaryochloris marina MBIC11017]
 gi|158305236|gb|ABW26853.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 529

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 53/172 (30%), Gaps = 27/172 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L   L   +              ++A R  L    +DE
Sbjct: 343 RQGQIILMSGLSGSGKSTVAHRLAPHLNAIHIR------------SDAVRKHLAGISLDE 390

Query: 62  FGAEAEAIVFAA---ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            GA  ++I   A        +  +       G  ++ D        Y   +   Q L   
Sbjct: 391 SGAGPDSIYTPAMTQRTYQRLRELGISLAQMGWTVILD------AKYDRVQLREQVLTQA 444

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            L +I VQ       +    PV     R+QNR      A  D    +     
Sbjct: 445 ELAQIPVQ------ILFCTAPVAELRSRLQNRRGDISDATPDLLVHQKQTFQ 490


>gi|149237312|ref|XP_001524533.1| opaque-specific ABC transporter CDR3 [Lodderomyces elongisporus NRRL
            YB-4239]
 gi|146452068|gb|EDK46324.1| opaque-specific ABC transporter CDR3 [Lodderomyces elongisporus NRRL
            YB-4239]
          Length = 1573

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 15/137 (10%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEA-- 66
            G  GAGKTT ++ L   L      V    +R   G P     +  +      +   E   
Sbjct: 945  GASGAGKTTLLNALSERLT---VGVITSGSRMVNGGPLDNDFQRSIGYVQQQDLHLETST 1001

Query: 67   --EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE- 122
              EA+ F+A         +  +  +G +  + D    SSYA        + L ++  +  
Sbjct: 1002 VREALQFSAYLRQ--PKDVSKSEKDGYVEKIIDLMEMSSYANAIVGVPGEGLNVEQRKRL 1059

Query: 123  -ISVQEV-MPDCTIILD 137
             I+V+ V  P   + LD
Sbjct: 1060 TIAVELVARPKLLVFLD 1076


>gi|76162572|gb|AAX30497.2| SJCHGC04111 protein [Schistosoma japonicum]
          Length = 86

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 8  SFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
           F G  GAGK+T + +L         + V H TR+P
Sbjct: 8  VFSGPSGAGKSTVLQMLMEKFPNNFGFSVSHTTRKP 43


>gi|56475575|ref|YP_157164.1| transposition helper protein [Aromatoleum aromaticum EbN1]
 gi|56311618|emb|CAI06263.1| transposition helper protein [Aromatoleum aromaticum EbN1]
          Length = 265

 Score = 38.1 bits (88), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKT  I+ L   L  + Y V  TR        +AAR  L            + ++
Sbjct: 110 GPPGVGKTHLIAGLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELARLDRFDLLI 169

Query: 71  ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
              F+  R D  E  +   L      + +R+   S A
Sbjct: 170 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 200


>gi|327263985|ref|XP_003216797.1| PREDICTED: adenylate kinase isoenzyme 1-like [Anolis carolinensis]
          Length = 219

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 38/216 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPG--GTPAAEAARHVLLSCGVDEFGAEAE 67
           G  G GK +    + +     +  V  + RE     T  A+A R ++L+  +   G   +
Sbjct: 33  GGPGCGKGSQSMRMAQKYNFTHLAVGDLLREEAIRPTTRAKAIRDIMLNGALVPSGFIMD 92

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            ++    RL  VENV      +G I+            +          L   +E+    
Sbjct: 93  LLM---DRLQKVENV------KGFIV------------ESFPREINQAKL--FEELV--G 127

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSL-RESACLDYFERKDVMIH----EKRRQIFLDIAR 182
            +P+  I+ D   +  ++R+  R  + +     +   R+ +  H    E     +L    
Sbjct: 128 RLPNMVIVFDCSTETMIQRLLIRSQMGQRVDDHESIIRQRLETHYTQCEPIVAHYLQ--- 184

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
                   +        V     ++V ++++   S 
Sbjct: 185 --KGILRNIIGEEPPDIVFDKCCSVVDDVLKGATSK 218


>gi|316970514|gb|EFV54444.1| ATPase family protein [Trichinella spiralis]
          Length = 2858

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 36/125 (28%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I   G  G+GKTT  ++LK  L +    +   T  P         + +L    +   
Sbjct: 1615 GVIIV--GPSGSGKTTIWTVLKEALIKMGKQINTYTFNP---------KAMLKHRLLGYI 1663

Query: 63   GAEA----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              +     + ++    R    ENV          ++CD                   +++
Sbjct: 1664 DPDTREWCDGLLTHLCRKCVSENVW-------SWIVCD-------------GEIDPEWIE 1703

Query: 119  SLQEI 123
            S+  +
Sbjct: 1704 SMNSV 1708


>gi|302763679|ref|XP_002965261.1| hypothetical protein SELMODRAFT_270489 [Selaginella moellendorffii]
 gi|300167494|gb|EFJ34099.1| hypothetical protein SELMODRAFT_270489 [Selaginella moellendorffii]
          Length = 221

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 69/211 (32%), Gaps = 45/211 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +        + VH+        A +  R  + S   +          
Sbjct: 34  GGPGSGKGTQCAKIVEKF---GF-VHL-------SAGDLLRAEINSGSANG--------- 73

Query: 71  FAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQG-ERDSSQHLFLDSLQEISVQ 126
                      +I+  + EGKI+  +   + L  + A  G ++        +     + +
Sbjct: 74  ----------TMIQNMIQEGKIVPSEVTVKLLQKAMAESGKDKFLIDGFPRNQENRAAFE 123

Query: 127 ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180
               + P+  +  D P +    R+  R   R    ++   ++  +  E        +   
Sbjct: 124 AVTGIEPEFILFFDCPQEEMEVRLLGRNQGRSDDNIETIRKRFKVFVESSLPVVDHY--- 180

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             ++  +   V++  + + V  +I  +  + 
Sbjct: 181 --DKKGKVRKVNAVKTKEEVFESIETLFQKF 209


>gi|284163600|ref|YP_003401879.1| ABC transporter [Haloterrigena turkmenica DSM 5511]
 gi|284013255|gb|ADB59206.1| ABC transporter related protein [Haloterrigena turkmenica DSM 5511]
          Length = 283

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEA 68
           G  G+GK+T +  L   L+  +        E       E AR + +LS   D   +    
Sbjct: 59  GPNGSGKSTLLKSLSNHLEPERGTVRIHGEELDTFNRKELARELGVLSQENDSLSSITVE 118

Query: 69  IVFAAARLDH 78
            +    R  H
Sbjct: 119 DLIYHGRYPH 128


>gi|261839021|gb|ACX98786.1| shikimic acid kinase I [Helicobacter pylori 52]
 gi|315586160|gb|ADU40541.1| shikimate kinase [Helicobacter pylori 35A]
          Length = 162

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|256084214|ref|XP_002578326.1| adenylate kinase [Schistosoma mansoni]
 gi|238663695|emb|CAZ34564.1| adenylate kinase, putative [Schistosoma mansoni]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 36/208 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    L +         H         + +  R  + S        + + + 
Sbjct: 16  GGPGSGKGTQCEKLVQKF-------HF----NHLSSGDLLRAEVQSG-----SPKGKELK 59

Query: 71  FAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
               R + V   V+   L E  I L D   +  +   G             ++     + 
Sbjct: 60  AMMERGELVPLEVVLALLKEAMIKLVD--KNCHFLIDGYPRELDQGI--KFEKEVCPCL- 114

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------N 183
             C I  D+  ++  KR+  R     +   +  +  +  I ++ R  F ++ +       
Sbjct: 115 --CVINFDVSEEVMRKRLLKR-----AETSNRVDDNEETIVKRFR-TFNELTKPVIEHYK 166

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           Q ++   +D++ +  ++   + + + + 
Sbjct: 167 QQNKVITIDASGTVDAIFDKVNHELQKF 194


>gi|226366331|ref|YP_002784114.1| shikimate kinase [Rhodococcus opacus B4]
 gi|226244821|dbj|BAH55169.1| shikimate kinase [Rhodococcus opacus B4]
          Length = 169

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 63/200 (31%), Gaps = 40/200 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T    L + L    +D  V  E     A      + +  G   F A  E   
Sbjct: 10  GPPGAGKSTIGRRLAQALDLTLFDTDVAVE---EEAGRTIAEIFVEEGEPAFRALEE--- 63

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                      ++R A+   + ++            G          + L+  +      
Sbjct: 64  ----------EIVRKAIESHEGIVS----------LGGGSILSERTRELLKGHT------ 97

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
              I L++ V  GLKR     +    +  D   +    +  KRR ++  +A     R   
Sbjct: 98  --VIYLEISVAEGLKRTGTNTARPLLSGGDP-RQVYTELMRKRRPLYRQVASI---RIRT 151

Query: 191 VDSAHSFQSVATNILNIVWE 210
            D   S   V   ++  + E
Sbjct: 152 -DG-RSPARVVQQLVAKLAE 169


>gi|115781726|ref|XP_784965.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115939854|ref|XP_001180859.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 700

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 7/70 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLS-----CGV 59
           I+  G  G+GKT+ +++++   Q+      V V+R  G T  +    +V+LS     C  
Sbjct: 377 IAIHGPSGSGKTSIMAMVQENAQKHLGRPCVVVSRFLGTTSQSSTIINVILSIAQQICAA 436

Query: 60  DEFGAEAEAI 69
            +    +E I
Sbjct: 437 FQIHDNSELI 446


>gi|89256930|ref|YP_514292.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. holarctica LVS]
 gi|290953990|ref|ZP_06558611.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. holarctica URFT1]
 gi|295312609|ref|ZP_06803361.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. holarctica URFT1]
 gi|89144761|emb|CAJ80096.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. holarctica LVS]
          Length = 331

 Score = 38.1 bits (88), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R             + E  
Sbjct: 134 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 190

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + N I  A  +G  +++ D
Sbjct: 191 --GADSASVIYNAIGSAKSKGIDVVIAD 216


>gi|328869580|gb|EGG17957.1| deoxyguanosine kinase [Dictyostelium fasciculatum]
          Length = 305

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 14/109 (12%)

Query: 93  LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM-------PDCTIILDLPVDIGLK 145
           ++ DR + S + +         +  +   + S +          P  TI L +      +
Sbjct: 135 VILDRSVFSDWVFAENCRREGLISSEGFSKYSDKRKQLISTIEIPHTTIYLSVEPSECQR 194

Query: 146 RVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
           R+Q+  +    +S  L Y E  D        Q+FLD  + +  +  +VD
Sbjct: 195 RIQSLRKRECEQSIPLSYLEGLDSCY-----QVFLDEMKQRGSKVLVVD 238


>gi|329904219|ref|ZP_08273701.1| DNA helicase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548104|gb|EGF32826.1| DNA helicase [Oxalobacteraceae bacterium IMCC9480]
          Length = 1973

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 12/135 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G  +  EG  G GK+  I+ L   L      V    E     A E     L S G+  
Sbjct: 691 SAGKNLVIEGPPGTGKSQTITNLISHLLATGKTVLFVSE--KMAALEVVHRRLKSLGLGP 748

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F    E     A + + ++ +       G   + D      +  + ER +     L+ L 
Sbjct: 749 FCL--ELHSSKAKKSEVLKQLGMALETAGTRTVAD------WEREAERLAVLRQELNELA 800

Query: 122 EISVQEVMP-DCTII 135
             ++ +V P D TI 
Sbjct: 801 N-ALHKVYPNDLTIY 814


>gi|326918530|ref|XP_003205541.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1-like isoform 1 [Meleagris gallopavo]
          Length = 603

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 38  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ + I     +P
Sbjct: 84  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 132 FFEVFVDAPLHVCEQR 147


>gi|325957720|ref|YP_004293132.1| deoxyguanosine kinase [Lactobacillus acidophilus 30SC]
 gi|325334285|gb|ADZ08193.1| deoxyguanosine kinase [Lactobacillus acidophilus 30SC]
 gi|327184368|gb|AEA32815.1| deoxyguanosine kinase [Lactobacillus amylovorus GRL 1118]
          Length = 228

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 45/229 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64
           I   G  GAGK++   +L ++L             G  P  E+      +  +  F    
Sbjct: 4   IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQ 121
           +  A +     L+   + I+ AL +   +L DR +   +  +Q   D  +     +D+  
Sbjct: 48  KKYAFLLQVYFLNTRFHSIKDALTQDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYY 106

Query: 122 EISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           E+ +  +M          PD  + +++  D  +KR+Q R    E    D         ++
Sbjct: 107 EL-LHNMMGELDRMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSHD---STLEDYYK 162

Query: 172 KRRQIFLDIARNQPDRCHI-VDSAH--------SFQSVATNILNIVWEL 211
           +  + +            + +D             + V   I++ + E+
Sbjct: 163 RLLRYYKPWYDKYDYSPKMEIDGDKYDFMSSEEDREIVLDQIVDKLKEV 211


>gi|283833317|ref|ZP_06353058.1| glutamine ABC transporter, ATP-binding protein [Citrobacter
          youngae ATCC 29220]
 gi|291070955|gb|EFE09064.1| glutamine ABC transporter, ATP-binding protein [Citrobacter
          youngae ATCC 29220]
          Length = 272

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++++  +P G     A R +
Sbjct: 52 VTILGPSGSGKSTLIRLINQLESLSGGEIYIDDKPIGQLRGAALRQL 98


>gi|262371737|ref|ZP_06065016.1| adenylate kinase [Acinetobacter junii SH205]
 gi|262311762|gb|EEY92847.1| adenylate kinase [Acinetobacter junii SH205]
          Length = 179

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           FI+  G  G+GK+T    L   L+ +  +
Sbjct: 2  KFINIIGTTGSGKSTLARKLAEKLKIQYIE 31


>gi|221132496|ref|XP_002161775.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 4207

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 24/114 (21%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
            G  G+GKT   S+L+  L +    V   T  P   P     R  LL     +    ++ +
Sbjct: 1970 GPSGSGKTCLWSMLRLALGKVGQTVKQYTMNPKAMP-----RTQLLGQIDIDTREWSDGV 2024

Query: 70   VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  AAR      V++  L     ++CD                   +++SL  +
Sbjct: 2025 LTKAAR-----EVVKEPLEVQSWIICD-------------GDIDPEWVESLNSV 2060


>gi|196231600|ref|ZP_03130458.1| protein of unknown function DUF344 [Chthoniobacter flavus
          Ellin428]
 gi|196224453|gb|EDY18965.1| protein of unknown function DUF344 [Chthoniobacter flavus
          Ellin428]
          Length = 252

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          +  L + FEG + AGK   I  L   L  +   VH   +P 
Sbjct: 51 HRSLIVVFEGPDAAGKGGAIKRLAERLDPRLLRVHSVIKPT 91


>gi|251798563|ref|YP_003013294.1| hypothetical protein Pjdr2_4593 [Paenibacillus sp. JDR-2]
 gi|247546189|gb|ACT03208.1| hypothetical protein Pjdr2_4593 [Paenibacillus sp. JDR-2]
          Length = 103

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          ++   +  +GI G+GKTT  + L  +L      V    E
Sbjct: 12 STKRLLIIDGIPGSGKTTTATRLHNYLTALGVRVKCLLE 50


>gi|89895475|ref|YP_518962.1| hypothetical protein DSY2729 [Desulfitobacterium hafniense Y51]
 gi|119371215|sp|Q24TX4|KGUA_DESHY RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|89334923|dbj|BAE84518.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 200

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41
          N GL I   G  GAGK T    L R L +  Y V   TR+P
Sbjct: 4  NHGLLIVLSGPSGAGKGTLCQELLRQLPQVKYSVSATTRQP 44


>gi|16080113|ref|NP_390939.1| ABC transporter ATP-binding protein [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|221311000|ref|ZP_03592847.1| hypothetical protein Bsubs1_16656 [Bacillus subtilis subsp.
          subtilis str. 168]
 gi|221315326|ref|ZP_03597131.1| hypothetical protein BsubsN3_16567 [Bacillus subtilis subsp.
          subtilis str. NCIB 3610]
 gi|221320243|ref|ZP_03601537.1| hypothetical protein BsubsJ_16488 [Bacillus subtilis subsp.
          subtilis str. JH642]
 gi|221324526|ref|ZP_03605820.1| hypothetical protein BsubsS_16632 [Bacillus subtilis subsp.
          subtilis str. SMY]
 gi|321312597|ref|YP_004204884.1| putative ABC transporter ATP-binding protein [Bacillus subtilis
          BSn5]
 gi|81815677|sp|O34314|YTLC_BACSU RecName: Full=Uncharacterized ABC transporter ATP-binding protein
          YtlC
 gi|2293296|gb|AAC00374.1| putative transporter [Bacillus subtilis]
 gi|2635545|emb|CAB15039.1| putative ABC transporter component, ATP-binding [Bacillus
          subtilis subsp. subtilis str. 168]
 gi|291485498|dbj|BAI86573.1| hypothetical protein BSNT_04454 [Bacillus subtilis subsp. natto
          BEST195]
 gi|320018871|gb|ADV93857.1| putative ABC transporter component, ATP-binding protein [Bacillus
          subtilis BSn5]
          Length = 260

 Score = 38.1 bits (88), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPG 42
           G FISF G  G GKTT +S++   ++  +   +   REP 
Sbjct: 32 KGDFISFLGPSGCGKTTLLSIIAGLIEPSEGRVLIEGREPN 72


>gi|327310790|ref|YP_004337687.1| ABC transporter-like protein [Thermoproteus uzoniensis 768-20]
 gi|326947269|gb|AEA12375.1| ABC transporter related protein [Thermoproteus uzoniensis 768-20]
          Length = 252

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 32/148 (21%)

Query: 11  GIEGAGKTTHISLL---------KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  G+GKTT I+++         +        DV +T  P     AE          V +
Sbjct: 34  GPNGSGKTTLINVVTGVYKPEAGRVVFHDDGRDVDITGWPPHKVFAEGIVRTFQIPQVFQ 93

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKIL---------------------LCDRFLD 100
                E ++  A R   V   +  A+ EG  +                     + DR+  
Sbjct: 94  RMTVIENLLVVA-RGQ-VGEDVLKAVREGAWIRQERELAERAFKILDMVGLGDVWDRYAY 151

Query: 101 SSYAYQGERDSSQHLFLDSLQEISVQEV 128
           S  A Q +        +   + I + E 
Sbjct: 152 SLSAGQMKLLELARALMAGAKLIILDEP 179


>gi|320326373|gb|EFW82426.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 498

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ     V +    G T  A A   + +    +     A+   
Sbjct: 299 GVNGAGKTTTIGKLAKKLQLGGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 354

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 355 TGADSASVIFDAVQAAKARGIDVLIAD 381


>gi|238913377|ref|ZP_04657214.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Tennessee str. CDC07-0191]
          Length = 512

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|222624888|gb|EEE59020.1| hypothetical protein OsJ_10764 [Oryza sativa Japonica Group]
          Length = 248

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
           G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9   GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                +     ++H+E+ +   L E      D +LD  Y
Sbjct: 69  GPNGGLIYC--MEHLEDNLDDWLDEQ----LDGYLDDDY 101


>gi|218192785|gb|EEC75212.1| hypothetical protein OsI_11476 [Oryza sativa Indica Group]
          Length = 237

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
           G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9   GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                +     ++H+E+ +   L E      D +LD  Y
Sbjct: 69  GPNGGLIYC--MEHLEDNLDDWLDEQ----LDGYLDDDY 101


>gi|218904316|ref|YP_002452150.1| phosphoribulokinase/uridine kinase [Bacillus cereus AH820]
 gi|218534874|gb|ACK87272.1| phosphoribulokinase/uridine kinase [Bacillus cereus AH820]
          Length = 218

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDE 61
           I   GI G   AGKTT  + L   L +   +   T       +++  +H ++      + 
Sbjct: 19  IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 75

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +  A   AA  L  +E  I+  +  G     D +   ++ Y   +  S    +  ++
Sbjct: 76  HRYKMTACHPAAHHLAALERDIQ-MVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVE 129

Query: 122 EISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +S   + P   D  I      +  L R   R      A ++Y  +     HE+RR  + 
Sbjct: 130 GMSAAFINPDLFDLKIYFYTDSETELMRRSIRDIDERGADINYLRQS----HEERRIQYE 185

Query: 179 DIARNQPDRCHIV 191
               +   R  I+
Sbjct: 186 VFMHSYSQRFDII 198


>gi|27904538|ref|NP_777664.1| FtsY protei [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
 gi|31340085|sp|Q89B28|FTSY_BUCBP RecName: Full=Cell division protein ftsY homolog
 gi|27903935|gb|AAO26769.1| FtsY protei [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
          Length = 397

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G+ G GKTT I  L +  ++K   V +    G T  A A   + L   ++      
Sbjct: 198 GVNGVGKTTLIGKLAKNYKKKGKSVILAA--GDTFRAAAIDQLKLWGEINSVSVIT 251


>gi|71400048|ref|XP_802935.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70865352|gb|EAN81489.1| hypothetical protein Tc00.1047053503731.9 [Trypanosoma cruzi]
          Length = 763

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 2/99 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G   +GKT+ +S L+R  ++ N++V    E      +    +++LS   +    + 
Sbjct: 365 VVITGGPCSGKTSCLSYLRRVFEKLNFNVFCVPEVATLLHSGGV-NLILSTSEERITQQR 423

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             +       D    +         ++L DR      AY
Sbjct: 424 VILQMMMMLEDAFYELAS-MRSRPSLILYDRGTMDGSAY 461


>gi|186684491|ref|YP_001867687.1| adenylate kinase [Nostoc punctiforme PCC 73102]
 gi|186466943|gb|ACC82744.1| adenylate kinase [Nostoc punctiforme PCC 73102]
          Length = 183

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 43/210 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T    L   L   N     T         E  R  +         A+   
Sbjct: 6   FLGPPGAGKGTQAQSLAGHL---NIPHIST--------GEILRQAMKEQTHLGIKAQNYV 54

Query: 69  IVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                     V+++++  L     E   +L D F          R  +Q  FL+ L E  
Sbjct: 55  NSGELVPDQLVQDLVQERLNQPDAENGWIL-DGF---------PRKVTQAAFLEELLETI 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180
            Q       + LD P D+ ++R+  R    ++  +            +R +++      +
Sbjct: 105 HQSGE--RVVNLDAPDDVVVERLLARGRKDDTEEVIR----------RRLEVYRAETAPL 152

Query: 181 ARNQPDR--CHIVDSAHSFQSVATNILNIV 208
                DR     V+   S + V T +  ++
Sbjct: 153 IDYYRDRQKLLTVNGNQSQEEVTTELQKVI 182


>gi|325922161|ref|ZP_08183950.1| Adenylate kinase [Xanthomonas gardneri ATCC 19865]
 gi|325547363|gb|EGD18428.1| Adenylate kinase [Xanthomonas gardneri ATCC 19865]
          Length = 187

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 69/208 (33%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T E       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  +   +   G   +      ++L E+  + 
Sbjct: 52  ----VMARGDLVSDEILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALDELLGKI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLARVDGVGSLDEVLERISKAL 185


>gi|323466933|gb|ADX70620.1| Excision endonuclease subunit UvrA [Lactobacillus helveticus H10]
          Length = 975

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 657 GKFIVVSGVSGSGKSTLVNMILKRVLAQK 685


>gi|319900414|ref|YP_004160142.1| shikimate kinase [Bacteroides helcogenes P 36-108]
 gi|319415445|gb|ADV42556.1| shikimate kinase [Bacteroides helcogenes P 36-108]
          Length = 175

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 47/202 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT      R L   N               ++ R + +  G D F      ++   
Sbjct: 11  GAGKTTLGKAFAREL---NIPFIDLDWYIEERFHKSIRELFMERGEDSFRELERNMLHEV 67

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
           A  ++V             ++                     F D+++ ++        T
Sbjct: 68  AEFENV-------------VIST-------------GGGTPCFFDNMKRMNEYG----YT 97

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP----DRCH 189
           + LD+  D+  +R++     R         + D  +H    +    +A+  P     R H
Sbjct: 98  VFLDVHPDVLFRRLRIATQQRPVLQG----KTDEELHAFIVE---TLAKRAPFYEQARYH 150

Query: 190 IVDSAHSFQSVATNILNIVWEL 211
             D +H  +S    I   V +L
Sbjct: 151 F-DGSH-LES-HQQITESVQQL 169


>gi|298493051|ref|YP_003723228.1| guanylate kinase ['Nostoc azollae' 0708]
 gi|298234969|gb|ADI66105.1| guanylate kinase ['Nostoc azollae' 0708]
          Length = 198

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 1/67 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
          G  I   G  G GK T +  L +      Y V   TR P          + +     ++ 
Sbjct: 19 GKLIVLTGPSGVGKGTLMQKLLQRHPELYYSVSVTTRSPRTGEVNGKNYYFISCSKFEQL 78

Query: 63 GAEAEAI 69
           A+ E +
Sbjct: 79 VAQGEFL 85


>gi|257876535|ref|ZP_05656188.1| ABC transporter [Enterococcus casseliflavus EC20]
 gi|257810701|gb|EEV39521.1| ABC transporter [Enterococcus casseliflavus EC20]
          Length = 268

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          MN+G FI+  G  GAGK+T ++ + 
Sbjct: 32 MNTGDFITIIGGNGAGKSTLLNSIA 56


>gi|253581645|ref|ZP_04858869.1| guanylate kinase [Fusobacterium varium ATCC 27725]
 gi|251835994|gb|EES64531.1| guanylate kinase [Fusobacterium varium ATCC 27725]
          Length = 185

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M  G      G  GAGK+T   L+++ L         TREP
Sbjct: 1  MPKGNLYVVSGPSGAGKSTICRLVRKMLGINLATSATTREP 41


>gi|256371798|ref|YP_003109622.1| dephospho-CoA kinase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008382|gb|ACU53949.1| dephospho-CoA kinase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 204

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 33/213 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK+T  + L         D          P +E    ++ + G D    E 
Sbjct: 5   IVVCGPTGSGKSTLRARLVER-GAVGIDADEVARAVVEPGSEVLASLVAAFGDDICDNEG 63

Query: 67  EAIV-FAAARL-------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                  AAR          +  +  PA+           +++  A     D    +   
Sbjct: 64  RLRRDVLAARAFGSAETTALLGRLTHPAIRAE--------IEAQLA--SAGDGDVVVVEV 113

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L   +   + PD  + +    +    RV     + E+       R       +R +  L
Sbjct: 114 PLWRRADDWICPDLVVWVGASAERAGARVAEEGRMSEAELRQR--RARFDFEAQRHEADL 171

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                      ++D+    +++A    + VW L
Sbjct: 172 -----------VIDNDGGPEALAKA-ADRVWSL 192


>gi|225712688|gb|ACO12190.1| Guanylate kinase [Lepeophtheirus salmonis]
          Length = 199

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 16/162 (9%)

Query: 11  GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GK+T I  L   F     + V H TR P       +A H +    + +  ++ E 
Sbjct: 13  GPSGSGKSTLIKKLTAEFPTAFGFSVSHTTRSPRPGEVHGSAYHFVTRKVMKDMLSKGE- 71

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
            +  A    ++      A+     ++ D   DS               +  + ++  + +
Sbjct: 72  FIENAEFSGNMYGTSFAAVES---VVSD---DSKICI----LDIDAQGVRQV-KVKEEFL 120

Query: 129 MPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMI 169
            P   + +++P  ++  +R+++R +  E +           I
Sbjct: 121 QP-LYVFINIPSMEVLEERLKSRNTETEESLARRMSAAKAEI 161


>gi|219123108|ref|XP_002181873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406474|gb|EEC46413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 308

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 23/134 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  GI G GK+T ++ L  + ++      +    G T  + A   + +     +    +
Sbjct: 111 IAVVGINGVGKSTSLAKLAYYFKQNGCSPLLVA--GDTFRSGAVEQLKVHASCLDIPMYS 168

Query: 67  EAI-----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +       + A A + H             ++L D            R  +    + +L 
Sbjct: 169 QGYSKDPSIVAKAAIQHATE------ENHDVVLID---------TAGRMQNNVPLMKALG 213

Query: 122 EISVQEVMPDCTII 135
           ++  +   PD  I+
Sbjct: 214 KLVTEN-KPDFVIL 226


>gi|158298344|ref|XP_318518.4| AGAP010790-PA [Anopheles gambiae str. PEST]
 gi|157014356|gb|EAA13735.5| AGAP010790-PA [Anopheles gambiae str. PEST]
          Length = 4002

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 32/111 (28%), Gaps = 26/111 (23%)

Query: 15   AGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
            +GKTT I+LLK  L  +     +H       +      R   L     ++       +  
Sbjct: 1891 SGKTTIIALLKEALIAQGQIIRIHTISPKSMSRVQLLGR---LDPDTRQWTDGVLTSMAV 1947

Query: 73   AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            A   +               ++CD                   ++++L  +
Sbjct: 1948 AVNAESRNVT--------SWIICD-------------GDVDPEWIEALNSV 1977


>gi|121720030|ref|XP_001276713.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1]
 gi|119404925|gb|EAW15287.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1]
          Length = 1288

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46
            + SG F++F G  G GK+T ISLL+RF +      H T E GG   
Sbjct: 1059 IQSGQFVAFVGPSGCGKSTLISLLERFYE----PTHGTVEVGGQDI 1100


>gi|152996778|ref|YP_001341613.1| ABC transporter-like protein [Marinomonas sp. MWYL1]
 gi|150837702|gb|ABR71678.1| ABC transporter related [Marinomonas sp. MWYL1]
          Length = 373

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 10/93 (10%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK--------RFLQRKNYDVHVTREPGGTPAAEAARH 52
           +N G FI F G  G GK+T + +L           L      V    EP     A   + 
Sbjct: 27  INDGEFIVFLGPSGCGKSTTLRMLAGLEDISGGEILINN--KVVNELEPIERDIAMVFQS 84

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRP 85
             L   +  +   A A+  A      ++  +RP
Sbjct: 85  YALYPHMSVYQNIAFALKLAGMSKAEIDEKVRP 117


>gi|58616546|ref|YP_195676.1| transposion helper protein, ATP-binding protein [Azoarcus sp. EbN1]
 gi|56316009|emb|CAI10652.1| transposion helper protein, ATP-binding protein [Aromatoleum
           aromaticum EbN1]
          Length = 255

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKT  I+ L   L  + Y V  TR        +AAR  L            + ++
Sbjct: 100 GPPGVGKTHLIAGLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELARLDRFDLLI 159

Query: 71  ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
              F+  R D  E  +   L      + +R+   S A
Sbjct: 160 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 190


>gi|134299556|ref|YP_001113052.1| guanylate kinase [Desulfotomaculum reducens MI-1]
 gi|134052256|gb|ABO50227.1| guanylate kinase [Desulfotomaculum reducens MI-1]
          Length = 200

 Score = 38.1 bits (88), Expect = 0.83,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 29/170 (17%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M   GL I   G  GAGK T    L +  +     V   TR              +    
Sbjct: 1   MTRQGLLIVISGPSGAGKGTICQGLLKKNKDLCLSVSCTTRPVRPGEVDGVNYFFVSKEA 60

Query: 59  VDEFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
            ++  +E E ++  A   D+      N +   L  G+ ++ +  +D   A Q ++   + 
Sbjct: 61  FEKMISENE-LLEYARVYDNYYGTPLNFVEEKLSTGQDVILE--IDIQGALQIKQKYPKG 117

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYF 162
                              +I  +P  + L  +R+  R +    +     
Sbjct: 118 ------------------VLIFVVPPSLSLLQERLTKRGTDSAESINKRL 149


>gi|326918532|ref|XP_003205542.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1-like isoform 2 [Meleagris gallopavo]
          Length = 608

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 38  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ + I     +P
Sbjct: 84  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 132 FFEVFVDAPLHVCEQR 147


>gi|315641781|ref|ZP_07896785.1| deoxynucleoside kinase [Enterococcus italicus DSM 15952]
 gi|315482456|gb|EFU72995.1| deoxynucleoside kinase [Enterococcus italicus DSM 15952]
          Length = 212

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 63/202 (31%), Gaps = 40/202 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  GAGK++  ++L   L     Y+     E      AE                +
Sbjct: 2   IVLAGTIGAGKSSLTAMLSHHLGSVAFYESVEDNEVLPLFYAE---------------PQ 46

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS---------QH 114
             A +     L+   + I+ AL     +L DR  + DS   +                  
Sbjct: 47  KYAFLLQIYFLNKRFDSIKRALSHPDNVL-DRSIYEDSLLFHLNADLGRATKTEVKVYDE 105

Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L  + L+E+    Q+  PD  + + +  D  L+R+  R    E    D            
Sbjct: 106 LLANMLEELPDVSQKKHPDLLVHIRISFDTMLERIAKRGRPYEQIAHDP----------S 155

Query: 173 RRQIFLDIARNQPDRCHIVDSA 194
               + ++ +         D++
Sbjct: 156 LYDYYQELNKRYDQWYDAYDAS 177


>gi|317056352|ref|YP_004104819.1| dethiobiotin synthase [Ruminococcus albus 7]
 gi|315448621|gb|ADU22185.1| dethiobiotin synthase [Ruminococcus albus 7]
          Length = 232

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 32/131 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------ 54
           MN GLFI+  G +  GKT   +LL + L    YD    +        +    ++      
Sbjct: 1   MNKGLFITGTGTD-IGKTYVTALLVKKLHDSGYDTAYFKAAVSGNRRDDMGRLIPGDAAY 59

Query: 55  ------LSCGVDEFGA---EAEAIVFAAARLD-------HVENVIRPALMEGKILLCD-- 96
                 +S  +D       EA      A+R +        V+        + K ++C+  
Sbjct: 60  VKEISGISQPIDSMCPYVYEAAVSPHLASRTEGSPVEIATVKTQYEKLCKKYKYVICEGS 119

Query: 97  -------RFLD 100
                  R+ D
Sbjct: 120 GGIVCPIRYDD 130


>gi|255642045|gb|ACU21289.1| unknown [Glycine max]
          Length = 284

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 70/238 (29%), Gaps = 51/238 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             G   +GK T   L+             D+       G+   + A+  +      +   
Sbjct: 70  ISGAPASGKGTQCHLITNKYGLVHIAAG-DLLRAEIATGSDNGKRAKQYM---EKGQLVP 125

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   ++    RL      ++P   E    L D +          R  SQ   L++L    
Sbjct: 126 DEIVVMMVKERL------LKPDSKENGW-LLDGY---------PRSLSQATALEAL---- 165

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFERKDVMIH 170
                P   ++L++  D+ ++RV  R                           ++     
Sbjct: 166 --GFRPHIFLLLEVSEDVLVERVVGRRLDPVTGKIYHLKYSPPETQEIAARLTQRFDDTE 223

Query: 171 EKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
           EK         Q    +     D    ++   S + V   I + +  L+++R +   S
Sbjct: 224 EKVKLRLNTHHQNVESVLSMYKDITVKINGNVSKEEVFAQIDSALTSLIEERKAASGS 281


>gi|229191091|ref|ZP_04318081.1| hypothetical protein bcere0002_27550 [Bacillus cereus ATCC 10876]
 gi|228592489|gb|EEK50318.1| hypothetical protein bcere0002_27550 [Bacillus cereus ATCC 10876]
          Length = 282

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILIQNKIEVELFLE 39


>gi|222149582|ref|YP_002550539.1| adenylate sulfate kinase protein [Agrobacterium vitis S4]
 gi|221736564|gb|ACM37527.1| adenylate sulfate kinase protein [Agrobacterium vitis S4]
          Length = 209

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 20/87 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L+  L  + Y  +                 +L       G   +   
Sbjct: 44  GLSGSGKSTVANALESQLHGQGYHTY-----------------ILDGDNVRHGLNRDLGF 86

Query: 71  FAAARLD---HVENVIRPALMEGKILL 94
             A R++    V  V +     G I++
Sbjct: 87  SDADRVENIRRVAEVAKLMADAGLIVI 113


>gi|254391557|ref|ZP_05006757.1| dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064]
 gi|294812019|ref|ZP_06770662.1| Dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064]
 gi|197705244|gb|EDY51056.1| dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064]
 gi|294324618|gb|EFG06261.1| Dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064]
          Length = 199

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             + P  D  I++D   +  L+R+     + ES              +  R+    IA  
Sbjct: 118 NGLAPRYDLVIVVDAAPETQLERLVELRGMDESEARARMAA------QATREQRRAIAD- 170

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 ++D+  S + +A  + ++  EL ++
Sbjct: 171 -----VVIDNDGSREQLAAQVESVWAELARR 196


>gi|170741579|ref|YP_001770234.1| signal recognition particle-docking protein FtsY [Methylobacterium
           sp. 4-46]
 gi|168195853|gb|ACA17800.1| signal recognition particle-docking protein FtsY [Methylobacterium
           sp. 4-46]
          Length = 473

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 18/136 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  + +   V +    G T  A A     L    +  GA   +  
Sbjct: 274 GVNGAGKTTTIGKLAQKFRAQGRSVMLAA--GDTFRAAAIEQ--LKVWGERTGAPVLSRP 329

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS-----V 125
             A       + ++ A   G  +L    +D+       R  ++   +  L++I      +
Sbjct: 330 QGADAAGLAFDALQAAREAGTDVLM---IDT-----AGRLQNKAGLMAELEKIVRVIRKL 381

Query: 126 QEVMPDCTII-LDLPV 140
            E  P   ++ LD  V
Sbjct: 382 DETAPHAVLLVLDATV 397


>gi|169623702|ref|XP_001805258.1| hypothetical protein SNOG_15094 [Phaeosphaeria nodorum SN15]
 gi|160705032|gb|EAT77637.2| hypothetical protein SNOG_15094 [Phaeosphaeria nodorum SN15]
          Length = 1295

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRF 27
             G FI+  G  G GK+T I++L+RF
Sbjct: 1071 KGKFIALVGASGCGKSTIIAMLERF 1095


>gi|149191502|ref|ZP_01869751.1| cell division protein FtsY [Vibrio shilonii AK1]
 gi|148834690|gb|EDL51678.1| cell division protein FtsY [Vibrio shilonii AK1]
          Length = 414

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 217 GVNGVGKTTTIGKLAKQYQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNDVPVIAQH-- 272

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A   G  +++ D
Sbjct: 273 TGADSASVIYDAIEAAKARGVDVVIAD 299


>gi|148270481|ref|YP_001244941.1| cytidylate kinase [Thermotoga petrophila RKU-1]
 gi|166199011|sp|A5IME2|KCY_THEP1 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|147736025|gb|ABQ47365.1| cytidylate kinase [Thermotoga petrophila RKU-1]
          Length = 220

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 58/240 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAA--EAARHVLLS 56
           I+ +G   +GK+T   LL   L   + +             E G +P +  +   + L  
Sbjct: 5   IAIDGPAASGKSTVARLLAEKLGFDHLNTGATYRSVAVYLHERGFSPFSAEKEIENALKD 64

Query: 57  CGVDEF----------------GAEAEAIVFAAARLD----HVENVIRPALMEGKILLCD 96
             +D                    EA  +    ARL+    H+  + R    +  I++  
Sbjct: 65  LKIDYVNGRVYINGEDYTEKIQSPEAGVLASNFARLEVVRRHLVRIQREICDDKNIVV-- 122

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE- 155
                      E      + L +              I L   ++  ++R    Y  R  
Sbjct: 123 -----------EGRDIGTVVLPNAH----------LKIFLTASLEARVERKLKEYQKRGL 161

Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVDS-AHSFQSVATNILNIVWELVQ 213
               +  ER+ +   E+  +   ++A  +P +   I+D+ + S + V   IL +V E + 
Sbjct: 162 KVTKEEVERELISRDEQDSK--RNVAPLKPAEDAVIIDTTSMSVEEVLDRILKLVRERMN 219


>gi|76803087|ref|YP_331182.1| cytidylate kinase [Natronomonas pharaonis DSM 2160]
 gi|121695362|sp|Q3IMV8|KCY_NATPD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|76558952|emb|CAI50548.1| cytidylate kinase [Natronomonas pharaonis DSM 2160]
          Length = 192

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 38/175 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
           + I+  G  G+GK+T  + L   L    Y+             +  R +    G+   E 
Sbjct: 1   MLITISGPAGSGKSTVAAGLAESL---GYEHV--------SGGDIFRDLADDRGLTPLEL 49

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE        LD  +  I  A     I+L     +S  A     + +          
Sbjct: 50  NKRAEEDDQIDRDLDRKQRDI--AESRDDIVL-----ESRLAGWMAGEHADFR------- 95

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                      I LD P+ +  +R+ +R         +  + +      + R+ +
Sbjct: 96  -----------IWLDAPLSVRAERIADREDKSVELAHNETKERGKSEALRYREYY 139


>gi|109897971|ref|YP_661226.1| adenylylsulfate kinase [Pseudoalteromonas atlantica T6c]
 gi|109700252|gb|ABG40172.1| adenylylsulfate kinase [Pseudoalteromonas atlantica T6c]
          Length = 198

 Score = 38.1 bits (88), Expect = 0.84,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +LL++ L       +                 LL       G   +   
Sbjct: 32  GLSGSGKSTIANLLEKKLADNGKHTY-----------------LLDGDNVRHGLNGDLTF 74

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
               R++++     + +  +  G I++ 
Sbjct: 75  SDKDRVENIRRISELSKLFVDSGLIVIT 102


>gi|322823439|gb|EFZ29192.1| hypothetical protein TCSYLVIO_4560 [Trypanosoma cruzi]
          Length = 2811

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFG 63
           +   G   +GKTT I  L   L   + + D  V  E    T   E  R + LS   +   
Sbjct: 61  VVITGPPFSGKTTQIRRLVEKLNVSQLDLDAMVRAEAEFDTAEGELIRTI-LSEREENRT 119

Query: 64  AE 65
             
Sbjct: 120 PR 121


>gi|325110886|ref|YP_004271954.1| guanylate kinase [Planctomyces brasiliensis DSM 5305]
 gi|324971154|gb|ADY61932.1| guanylate kinase [Planctomyces brasiliensis DSM 5305]
          Length = 209

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 23/175 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  G+GKTT +S L+              TR P          + L     ++  A
Sbjct: 21  VVLSGPSGSGKTTIVSRLEAESPVPLVKSVSATTRAPRKHEVDGQDYYFLAPEEFEQRRA 80

Query: 65  EAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             E + +A   R       ++  L        DR      A +    +   + ++  Q +
Sbjct: 81  RGEFLEYAEVFRTGCWYGTLKSEL--------DR------ARKQSAWALLEIDVEGAQNV 126

Query: 124 SVQEVMPD-CTIILDLP-VDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRR 174
             Q   PD  TI L  P VD   +R++ R +  E       E  R+++    + +
Sbjct: 127 MQQ--YPDALTIFLTTPSVDEFERRLRARGTEEEHVIQRRLETARRELEFANRYQ 179


>gi|302348565|ref|YP_003816203.1| ATPase, PilT family [Acidilobus saccharovorans 345-15]
 gi|302328977|gb|ADL19172.1| ATPase, PilT family [Acidilobus saccharovorans 345-15]
          Length = 496

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ I+  G  GAGKTT    L  F   +   V     P     + +      S    +  
Sbjct: 246 GILIA--GSPGAGKTTFAQALAEFYASRGKVVKTIESPRDMRLSPSITQY--SKNYADMT 301

Query: 64  AEAEAIVFA 72
              + ++ +
Sbjct: 302 ELHDILLLS 310


>gi|295399782|ref|ZP_06809763.1| signal recognition particle-docking protein FtsY [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978185|gb|EFG53782.1| signal recognition particle-docking protein FtsY [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 330

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    +  GAE 
Sbjct: 123 ILFVGVNGVGKTTTIGKLAHKLKSEGKTVMLAA--GDTFRAGAIEQ--LEVWGERVGAEV 178

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
                 +     + + I+ A   G  +LLCD
Sbjct: 179 IKQTAGSDPAAVIYDAIQAAKARGADVLLCD 209


>gi|224534592|ref|ZP_03675168.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia spielmanii A14S]
 gi|224514269|gb|EEF84587.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia spielmanii A14S]
          Length = 347

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FI+  G  G GKTT I +L  FL +K  +++ 
Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKTGEIYF 66


>gi|218437648|ref|YP_002375977.1| excinuclease ABC subunit A [Cyanothece sp. PCC 7424]
 gi|218170376|gb|ACK69109.1| excinuclease ABC, A subunit [Cyanothece sp. PCC 7424]
          Length = 1002

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVL 54
           G  +S  G+ G+GK+T I  LL   LQ   +  V   ++ G     EA   V+
Sbjct: 687 GKLVSITGVSGSGKSTLINELLYPALQHHLSRHVPFPKQLGAIKGLEAIDKVI 739


>gi|161504017|ref|YP_001571129.1| hypothetical protein SARI_02110 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865364|gb|ABX21987.1| hypothetical protein SARI_02110 [Salmonella enterica subsp.
          arizonae serovar 62:z4,z23:--]
          Length = 578

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|115386444|ref|XP_001209763.1| hypothetical protein ATEG_07077 [Aspergillus terreus NIH2624]
 gi|114190761|gb|EAU32461.1| hypothetical protein ATEG_07077 [Aspergillus terreus NIH2624]
          Length = 645

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 21/137 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65
           IS  G+ G GK+T++  +  FL + NY V +      T  + A   + +      E  A 
Sbjct: 438 ISIVGVNGVGKSTNLGKICYFLLQNNYRVLIAA--CDTFRSGAVEQLRVHARNLKELSAR 495

Query: 66  A---EAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFL 117
               E  ++         NV + A+  G      ++L D            R  +    +
Sbjct: 496 ENVGEVELYEKGYGKDAANVAKDAVEYGAANKFDVVLID---------TAGRRHNDQRLM 546

Query: 118 DSLQEISVQEVMPDCTI 134
            SL++ +     PD   
Sbjct: 547 SSLEKFAKFA-KPDKIF 562


>gi|94991925|ref|YP_600024.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS2096]
 gi|94545433|gb|ABF35480.1| Dephospho-CoA kinase [Streptococcus pyogenes MGAS2096]
          Length = 206

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52
              + I   G   +GK+T + ++    ++  Y       V    +  G    EA R    
Sbjct: 7   KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 62

Query: 53  --VLLSCGVDEFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +L + G  +    +E +       A        +I+  L   +             + 
Sbjct: 63  NQILKADGELDRTKLSEMLFSNPNNMATSSAIQNQIIKEELAAKRD------------HL 110

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            +  +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         + 
Sbjct: 111 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 168

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                      L I   +P    ++D+    +++   + + +  L   R
Sbjct: 169 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 206


>gi|25144563|ref|NP_741216.1| NADH Ubiquinone Oxidoreductase family member (nuo-4)
          [Caenorhabditis elegans]
 gi|21450539|gb|AAM54175.1|U21320_6 Hypothetical protein K04G7.4b [Caenorhabditis elegans]
          Length = 188

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 11/24 (45%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
            I  EG  G+GKTT    L   L
Sbjct: 73 KLIVVEGNIGSGKTTLAKQLADQL 96


>gi|219669911|ref|YP_002460346.1| guanylate kinase [Desulfitobacterium hafniense DCB-2]
 gi|219540171|gb|ACL21910.1| Guanylate kinase [Desulfitobacterium hafniense DCB-2]
          Length = 200

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41
          N GL I   G  GAGK T    L R L +  Y V   TR+P
Sbjct: 4  NHGLLIVLSGPSGAGKGTLCQELLRQLPQVKYSVSATTRQP 44


>gi|307555080|gb|ADN47855.1| hypothetical ATP-binding protein YghS [Escherichia coli ABU 83972]
          Length = 232

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L       H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 72  KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225

Query: 207 IVWELV 212
            +   +
Sbjct: 226 AIQAAL 231


>gi|303232269|ref|ZP_07318968.1| cytidylate kinase [Atopobium vaginae PB189-T1-4]
 gi|302481679|gb|EFL44740.1| cytidylate kinase [Atopobium vaginae PB189-T1-4]
          Length = 520

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  G+GK+T    + R L
Sbjct: 1  MIIAIDGPSGSGKSTVARSIARRL 24


>gi|260655822|ref|ZP_05861291.1| ferrichrome transport ATP-binding protein FhuC [Jonquetella
          anthropi E3_33 E1]
 gi|260629438|gb|EEX47632.1| ferrichrome transport ATP-binding protein FhuC [Jonquetella
          anthropi E3_33 E1]
          Length = 250

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
           G FIS  GI GAGK+T +  L + L+
Sbjct: 27 RGTFISILGINGAGKSTLLKNLNKTLR 53


>gi|238749497|ref|ZP_04611002.1| LAO/AO transport system kinase [Yersinia rohdei ATCC 43380]
 gi|238712152|gb|EEQ04365.1| LAO/AO transport system kinase [Yersinia rohdei ATCC 43380]
          Length = 318

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I+  G  GAGK+T +++L   L  + + V  +  +P     GG+   +  R + LS    
Sbjct: 46  IT--GTPGAGKSTFLAVLGEELLSQGHKVAVIAIDPSSPVSGGSILGDKTRMLNLSRADH 103

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILL 94
            F     +             +I      G  I++
Sbjct: 104 AFVRPVPSRGHLGGASQRTRELILLCEAAGYDIVI 138


>gi|237799965|ref|ZP_04588426.1| hypothetical protein POR16_14105 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022820|gb|EGI02877.1| hypothetical protein POR16_14105 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 161

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 31/155 (20%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK+T    L        +   +  E                   D+  + A+ I  A  
Sbjct: 15  SGKSTLAKALSVE-----HSAILLSEDSWLSGLY----------PDDIKSVADYIRLARR 59

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTI 134
             D +  ++   L  G  ++ D F  ++ A               L+ ++    +P C  
Sbjct: 60  IRDVLGPLVVSILRSGVAVVLD-FPANTVA-----------DRKWLRSLADDAQVPHCLH 107

Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            LD+  D+ L R+  R    E      F   D   
Sbjct: 108 YLDVDDDVCLARLHARNEKAEHD----FSATDAEF 138


>gi|257066792|ref|YP_003153048.1| signal recognition particle protein [Anaerococcus prevotii DSM
           20548]
 gi|256798672|gb|ACV29327.1| signal recognition particle protein [Anaerococcus prevotii DSM
           20548]
          Length = 445

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTTH   L   L+++N +  +T      PAA     V+      E   + +   
Sbjct: 108 GLQGSGKTTHSGKLALKLKKENRNPMLTALDIYRPAAIEQLKVVGKTAGVEVFDKDKQDP 167

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
              AR    E      L    +++ D            R       +D L+ I  + V P
Sbjct: 168 VKTAR----EAKDYARLNNHDVVILD---------TAGRLQIDTDLMDELKNI-KEAVNP 213

Query: 131 DCTIILDLPVDIGLK 145
           D  I+L +    G +
Sbjct: 214 D-EILLVVDAMTGQE 227


>gi|257052419|ref|YP_003130252.1| daunorubicin resistance ABC transporter ATPase subunit [Halorhabdus
           utahensis DSM 12940]
 gi|256691182|gb|ACV11519.1| daunorubicin resistance ABC transporter ATPase subunit [Halorhabdus
           utahensis DSM 12940]
          Length = 411

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 73/226 (32%), Gaps = 38/226 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLL 55
            G F  F G  GAGKTT I +L   L+          +DV   R          A+   +
Sbjct: 68  QGEFFGFLGPNGAGKTTTIKVLATLLEPTSGTVEVNGFDVVRDRTAVRASIGYMAQETSI 127

Query: 56  SCGVDEFGAEAEAIVFAAAR----LDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERD 110
                E  A  E ++FA        D     I   L    ++ L D  +  + A  G   
Sbjct: 128 D---TELTAR-ENLMFACDAYGVPRDDRARRIADLLN---LVDLAD--VADTPA--GNFS 176

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 LD+   +      PD    LD     GL   Q R  L E             + 
Sbjct: 177 GGMKKRLDAATALVHD---PDLVF-LD-EPTTGLD-PQARNRLWEYFR--RINAGGTTVF 228

Query: 171 EKRRQIFLDIARNQPDRCHIV-D----SAHSFQSVATNILNIVWEL 211
              +  +L+ A +  DR  ++ D    +  +   +   +   + EL
Sbjct: 229 LTTQ--YLEEADHLCDRLAVIRDGRIVADGAPDELKRRVGGDILEL 272


>gi|225849324|ref|YP_002729488.1| dethiobiotin synthase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643194|gb|ACN98244.1| dethiobiotin synthase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 217

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 16/84 (19%)

Query: 1  MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPA----------- 46
          M + LFI+    + G GKTT  + + + L+ K  +V   +  E G  P            
Sbjct: 1  MLNSLFIT--ATDTGVGKTTVSAAICKLLKEKGVNVAYFKPAETGCQPIPQDAYTISKIT 58

Query: 47 AEAARHVLLSCGVDEFGAEAEAIV 70
           +    V++    +        ++
Sbjct: 59 GQPLEEVVIYTFENPVAPYTATVL 82


>gi|222147288|ref|YP_002548245.1| ABC transporter nucleotide binding/ATPase protein
          (sn-Glycerol-3-phosphate) [Agrobacterium vitis S4]
 gi|221734278|gb|ACM35241.1| ABC transporter nucleotide binding/ATPase protein
          (sn-Glycerol-3-phosphate) [Agrobacterium vitis S4]
          Length = 368

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 6/66 (9%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK------RFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          +N G FI   G  G GK+T + ++         + R    V  T EP     A   ++  
Sbjct: 27 INDGEFIVLVGPSGCGKSTLLRMVAGLESISEGVVRIGDRVVNTVEPADRDIAMVFQNYA 86

Query: 55 LSCGVD 60
          L   + 
Sbjct: 87 LYPHMT 92


>gi|88802667|ref|ZP_01118194.1| Deoxynucleoside kinase subfamily, putative [Polaribacter irgensii
           23-P]
 gi|88781525|gb|EAR12703.1| Deoxynucleoside kinase subfamily, putative [Polaribacter irgensii
           23-P]
          Length = 204

 Score = 38.1 bits (88), Expect = 0.85,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 32/189 (16%)

Query: 14  GAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           GAGKTT   LL +  + + +Y+             E AR          +    +     
Sbjct: 10  GAGKTTLTKLLAKHYKWKPHYESVDENPYLDDFYTEMAR----------WSFNLQVYFLN 59

Query: 73  AARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEISV 125
           +         I      G  ++ DR  + D+     +    G   +  +    SL ++  
Sbjct: 60  SRFRQ-----IVALRESGDNIIQDRTIYEDAHIFAPNLHAMGLMTNRDYSNYSSLFDLME 114

Query: 126 QEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             V  PD  I L   +   + ++  R    E++         +    +  + +     N 
Sbjct: 115 NLVRPPDLLIYLRADISTLVGQIHKRGREYENSI-------SIDYLSRLNERYEAWVSNY 167

Query: 185 -PDRCHIVD 192
              +  I+D
Sbjct: 168 SKGKLLIID 176


>gi|332159431|ref|YP_004424710.1| adenylate kinase [Pyrococcus sp. NA2]
 gi|331034894|gb|AEC52706.1| adenylate kinase [Pyrococcus sp. NA2]
          Length = 220

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 67/226 (29%), Gaps = 50/226 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK+T    +                     + +  R  +        G E E  +
Sbjct: 7   GPPGSGKSTQARKITER-----------YGLTYISSGDIIRAEIK--ARTPIGIEMEHYL 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
              +R D + + I        +++   R +  ++   G   +     +     +    + 
Sbjct: 54  ---SRGDLIPDTIV-----NTLIISKLRRVRENFIMDGYPRT-PEQVIALENYLYDHGIK 104

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------------RKDV--M 168
            D  I + +  +  ++R+  R    +   + + E                   R+D    
Sbjct: 105 IDVAIDIFITKEESIRRISGRRICSKCGAVYHVEFNPPKIPGKCDICGGELVQREDDRPE 164

Query: 169 IHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIV 208
           I  KR  I++     I +   +      +D   S   V   I  ++
Sbjct: 165 IVGKRYDIYIKNMSPIIKFYQKQGIYVKIDGHGSINEVWERIRPLL 210


>gi|325267267|ref|ZP_08133929.1| cell division protein FtsY [Kingella denitrificans ATCC 33394]
 gi|324981204|gb|EGC16854.1| cell division protein FtsY [Kingella denitrificans ATCC 33394]
          Length = 521

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L ++ Q++   V +
Sbjct: 323 GINGAGKTTSIGKLAKYFQKQGKSVML 349


>gi|308173522|ref|YP_003920227.1| adenylylsulfate kinase [Bacillus amyloliquefaciens DSM 7]
 gi|307606386|emb|CBI42757.1| adenylylsulfate kinase [Bacillus amyloliquefaciens DSM 7]
 gi|328553545|gb|AEB24037.1| adenylyl-sulfate kinase [Bacillus amyloliquefaciens TA208]
 gi|328911663|gb|AEB63259.1| adenylylsulfate kinase [Bacillus amyloliquefaciens LL3]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                 ++L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R +++     V +  + +G I++         A+       +    + + E    E
Sbjct: 76  SDDDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRDQVRELVAEGEFNE 127

Query: 128 VMPDCTIILDLPVDIGLKR 146
                 I +   +DI  KR
Sbjct: 128 ------IYVKCDLDICEKR 140


>gi|302871874|ref|YP_003840510.1| cytidylate kinase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574733|gb|ADL42524.1| cytidylate kinase [Caldicellulosiruptor obsidiansis OB47]
          Length = 226

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 69/250 (27%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL-----------QRKNYDVHVTREPGGTPAAEAARHVL- 54
           I+ +G  GAGK+T   LL   L           +     V   +       +     +L 
Sbjct: 6   IAIDGPAGAGKSTISKLLASQLGYIHIDTGAMYRAVGLKVL--KNNISPHDSRKIVEILN 63

Query: 55  ----------------LSCGV-DEFGAEAEAIVFAAAR---LDHVENVIR--PALMEGKI 92
                           L      E   + E  ++A+      +  E +++    L + K 
Sbjct: 64  STDIKIKLVDGKQLVFLDGEDVTEEIRQPEVSMYASDVSKIREVRERLVKMQQDLAKQKG 123

Query: 93  LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR-----V 147
           ++ D                    L + +            I L    +   KR      
Sbjct: 124 VIMD------------GRDIGTHVLPNAE----------LKIFLTATAEERAKRRFLELK 161

Query: 148 QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILN 206
           Q  Y +     LD  +++D     +     L IA +      ++DS + S + V   IL 
Sbjct: 162 QKGYDVDYYQLLDEIKKRDQNDMTREFAP-LRIAEDA----IVIDSTSLSIEEVLQKILE 216

Query: 207 IVWELVQKRV 216
           ++ ++++  V
Sbjct: 217 LINKVIKDEV 226


>gi|317132133|ref|YP_004091447.1| ABC transporter related protein [Ethanoligenens harbinense
          YUAN-3]
 gi|315470112|gb|ADU26716.1| ABC transporter related protein [Ethanoligenens harbinense
          YUAN-3]
          Length = 256

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 15/26 (57%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G FIS  G  G GKTT + L+   LQ
Sbjct: 36 GEFISLLGPSGCGKTTLLRLVADLLQ 61


>gi|226467456|emb|CAX69604.1| uridylate kinase [Schistosoma japonicum]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 70/210 (33%), Gaps = 36/210 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    +    +   + VH++     RE   +  +E A  + +          
Sbjct: 10  GGPGAGKGTVCQQIV---KEYGF-VHLSAGELLREARDSSDSEFASKIQMHMKNGTIVP- 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A      +   ++      K         +++   G   +  +  L   +++S 
Sbjct: 65  ------AKITCGLLYQAMKKNYENAK--------CTNFLVDGFPRNDDNR-LCWEEDLST 109

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182
             V+    I+L+ P D+ ++R   R+S R     +  + +     E+     Q +     
Sbjct: 110 STVL-KRVIVLECPDDVCVQRCLGRHSNRIDDNEETLKLRIKQFKEQCMPVIQFY----- 163

Query: 183 NQPDRCH-IVDSAHSFQSVATNILNIVWEL 211
            +       +D+  S   V   +  ++  L
Sbjct: 164 -EKQNLVTRIDANKSIPEVYEQVRQMMQTL 192


>gi|170719541|ref|YP_001747229.1| signal recognition particle-docking protein FtsY [Pseudomonas
           putida W619]
 gi|169757544|gb|ACA70860.1| signal recognition particle-docking protein FtsY [Pseudomonas
           putida W619]
          Length = 514

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 315 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 370

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 371 TGADSASVIFDAVQAAKARGVDVLIAD 397


>gi|111023492|ref|YP_706464.1| signal recognition particle protein [Rhodococcus jostii RHA1]
 gi|110823022|gb|ABG98306.1| signal recognition particle protein [Rhodococcus jostii RHA1]
          Length = 528

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 22/157 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60
           G++G+GKTT    L ++L+ + +   +       P A     ++             G  
Sbjct: 107 GLQGSGKTTLAGKLAKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTS 166

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             G + E  V AA  ++     +  A  +   +++ D            R       +  
Sbjct: 167 IGGGDNELGVTAADPVEVARAGVEEARNKQFDVVIVD---------TAGRLGIDADLMAQ 217

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
              I    V PD TI + L   IG   V    + RE 
Sbjct: 218 AAGI-RDAVNPDETIFV-LDAMIGQDAVSTAEAFREG 252


>gi|16802849|ref|NP_464334.1| hypothetical protein lmo0807 [Listeria monocytogenes EGD-e]
 gi|224501889|ref|ZP_03670196.1| hypothetical protein LmonFR_05152 [Listeria monocytogenes FSL
          R2-561]
 gi|16410196|emb|CAC98885.1| lmo0807 [Listeria monocytogenes EGD-e]
          Length = 364

 Score = 38.1 bits (88), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT + L+  FL+     +++
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYL 65


>gi|308476870|ref|XP_003100650.1| CRE-CHE-3 protein [Caenorhabditis remanei]
 gi|308264668|gb|EFP08621.1| CRE-CHE-3 protein [Caenorhabditis remanei]
          Length = 4175

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 23/113 (20%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
            G  G+GK+T   +L R L      + VT+           R+ LL     +     + I+
Sbjct: 1920 GAAGSGKSTIWKVLHRALILTKKPLRVTQFNPKA----VNRNKLLGNMDMDTREWTDGII 1975

Query: 71   FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              AAR    +  I         ++CD                   ++++L  +
Sbjct: 1976 TMAAREVQKDTTI------HHWIVCD-------------GDIDPEWVEALNSV 2009


>gi|295705077|ref|YP_003598152.1| putative metal ABC transporter ATP-binding protein [Bacillus
          megaterium DSM 319]
 gi|294802736|gb|ADF39802.1| putative metal ABC transporter, ATP-binding protein [Bacillus
          megaterium DSM 319]
          Length = 427

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F++  G  G+GKTT I L+   L  ++ +V V
Sbjct: 27 KGSFVALLGPNGSGKTTLIRLIMNVLTIQSGEVKV 61


>gi|294499689|ref|YP_003563389.1| putative metal ABC transporter ATP-binding protein [Bacillus
          megaterium QM B1551]
 gi|294349626|gb|ADE69955.1| putative metal ABC transporter, ATP-binding protein [Bacillus
          megaterium QM B1551]
          Length = 427

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F++  G  G+GKTT I L+   L  ++ +V V
Sbjct: 27 KGSFVALLGPNGSGKTTLIRLIMNVLTIQSGEVKV 61


>gi|294102040|ref|YP_003553898.1| signal recognition particle-docking protein FtsY [Aminobacterium
           colombiense DSM 12261]
 gi|293617020|gb|ADE57174.1| signal recognition particle-docking protein FtsY [Aminobacterium
           colombiense DSM 12261]
          Length = 310

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            S   I   G+ G+GKTT  + L     R+   V +
Sbjct: 101 KSPKVIVLVGVNGSGKTTTAAKLAEQFHRQGKKVIL 136


>gi|291278608|ref|YP_003495443.1| heme exporter ATP-binding protein [Deferribacter desulfuricans
          SSM1]
 gi|290753310|dbj|BAI79687.1| heme exporter ATP-binding protein [Deferribacter desulfuricans
          SSM1]
          Length = 238

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          N G FIS  G  GAGK+T + LL   ++  N D+  
Sbjct: 28 NQGDFISIFGPNGAGKSTLLKLLSTQIRPTNGDIFF 63


>gi|311748547|ref|ZP_07722332.1| guanylate kinase [Algoriphagus sp. PR1]
 gi|126577066|gb|EAZ81314.1| guanylate kinase [Algoriphagus sp. PR1]
          Length = 192

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLS--- 56
           M  G  I F    G+GKT+ +  L + +    + +   TR+  G        +  LS   
Sbjct: 1   MTHGKAIIFSAPSGSGKTSLVRHLIQKIPNLGFSISACTRDKRGRHEVHGKDYYFLSQEQ 60

Query: 57  --CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +D+        V+A      ++  I+     GK ++ D
Sbjct: 61  FKKHIDQDDFIEWEEVYAGNFYGTLKEEIQRIWDSGKAVIFD 102


>gi|116582914|gb|ABK00078.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 140

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 52  GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 106

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 107 TTGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|257076586|ref|ZP_05570947.1| cytidylate kinase [Ferroplasma acidarmanus fer1]
          Length = 180

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 58/214 (27%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           + I+  G  G+GKTT   LL   L  K     Y      E       + + +      +D
Sbjct: 1   MIITISGESGSGKTTVGKLLASSLNYKFFSGGYFFRKKAEEYNMDLIDFSNYAEHHPEID 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +                H +++I  + + G             AY               
Sbjct: 61  KEEDRMIVEFM-----QHNDDIILESRLSGY-----------MAY--------------- 89

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + ++  +     I L+  +   + R+ +R        +D        I  + R  FL  
Sbjct: 90  -KNNINAIK----IYLNTDIATRVDRLASRDK-----GVDR-----AGIMTRARSEFLRY 134

Query: 181 A-------RNQPDRCHIVDSAH-SFQSVATNILN 206
                   R   +  +I+D+ H S +++  +I++
Sbjct: 135 MIFYGIDYRVFTNYDYIIDTDHISPENIVNDIVD 168


>gi|254495201|ref|ZP_05108125.1| deoxynucleoside kinase [Polaribacter sp. MED152]
 gi|85819553|gb|EAQ40710.1| deoxynucleoside kinase [Polaribacter sp. MED152]
          Length = 204

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 36/191 (18%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   LL +  + K +   V   P                 ++ +    +     +
Sbjct: 10  GAGKTTLTKLLAKHYKWKPHFESVDENPYLDDFY---------GEMERWSFNLQVYFLNS 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQHLFLDSL-QE 122
                    I      GK ++ DR  + D+        +      RD S +  L  L + 
Sbjct: 61  RFRQ-----ILELRETGKNIIQDRTIYEDAHIFAPNLHAMGLMTNRDYSNYSSLFELMEN 115

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +      PD  I L   +   + ++  R    E++         +    +  + +     
Sbjct: 116 LVSP---PDLLIYLRADISTLVGQIHKRGREYENSI-------SIDYLSRLNERYEAWIS 165

Query: 183 NQ-PDRCHIVD 192
                +  ++D
Sbjct: 166 TYTKGKLLVID 176


>gi|329770337|ref|ZP_08261720.1| hypothetical protein HMPREF0433_01484 [Gemella sanguinis M325]
 gi|328836695|gb|EGF86351.1| hypothetical protein HMPREF0433_01484 [Gemella sanguinis M325]
          Length = 331

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 7/93 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I F G  G+GK+T +  L     +    V    +P      +   +++     ++ G  
Sbjct: 141 LILFSGPTGSGKSTSMYKLASRCAQLGKQVLTIEDP----VEKNINNLIQMQINEKAGIT 196

Query: 66  AEAIVFAAARLD---HVENVIRPALMEGKILLC 95
            E  + +  R D    V   +R     G+++  
Sbjct: 197 YENALKSMLRCDPDVLVVGEVRDYKTAGQVITS 229


>gi|326433541|gb|EGD79111.1| cytidylate kinase [Salpingoeca sp. ATCC 50818]
          Length = 196

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 43/212 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  GAGK T    +    + K+    D+       G+  AE     +    +       E
Sbjct: 13  GPPGAGKGTQCERIVDTYKFKHLSAGDLLRAERNSGSETAELINGYIKEGKIVPVAITIE 72

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             +   A   H          +G + L D F  ++  + G  +                 
Sbjct: 73  --LIHKAMEAH----------DGNLFLIDGFPRNADNFDGWAERMGDKVDARF------- 113

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-------I 180
                 + LD   +   +R   R +   S  +D     +V   +KR + + +       +
Sbjct: 114 -----VLFLDCDEETSTQRCLQRAAS--SGRVD----DNVESLKKRHRTYEESTMPVIDL 162

Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILNIVWEL 211
            R +  +R   VD++ S  +V   +  I  E 
Sbjct: 163 FRKEGMER--RVDASESIDAVWEKVKEIFAEA 192


>gi|320331637|gb|EFW87575.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330872359|gb|EGH06508.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 500

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ     V +    G T  A A   + +    +     A+   
Sbjct: 301 GVNGAGKTTTIGKLAKKLQLGGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 356

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 357 TGADSASVIFDAVQAAKARGIDVLIAD 383


>gi|309781366|ref|ZP_07676102.1| deoxynucleoside kinase family protein [Ralstonia sp. 5_7_47FAA]
 gi|308919779|gb|EFP65440.1| deoxynucleoside kinase family protein [Ralstonia sp. 5_7_47FAA]
          Length = 214

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 22/177 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT     L   L+        T        A    H            + 
Sbjct: 9   IVVEGPIGVGKTALAQRLADHLRAS------TLFETPAENA-FIAHFYEDPARYALPVQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSL-QEI 123
             ++  A RL         A + G+ ++ D FL  D  +A Q    + +    D++   +
Sbjct: 62  RFLLQRAERL----KAWHKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMANAL 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           ++ +   D  + L    +  L RV  R    E+         D    E+    + ++
Sbjct: 117 ALPQQRIDLVVCLQARAEDLLPRVTRRAVPYETGI-------DAEYLERICAAYGEL 166


>gi|309789647|ref|ZP_07684228.1| adenylate kinase [Oscillochloris trichoides DG6]
 gi|308228383|gb|EFO82030.1| adenylate kinase [Oscillochloris trichoides DG6]
          Length = 225

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 46/161 (28%), Gaps = 45/161 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L                     + +  R  L            E  +
Sbjct: 8   GPPGAGKGTQAKTLSERTS-----------LSHVASGDLFRAALSEG--------TELGL 48

Query: 71  FA---AARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            A     R + V          E + +P    G  ++ D F          R   Q   L
Sbjct: 49  LAKSYMDRGELVPDEVVIGMILERIAQPDCANG--VIFDGF---------PRTLEQATAL 97

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           +    ++      D  + L +P D+ L+R+  R + +    
Sbjct: 98  EQ--ALAKHGSTIDAVLYLFVPQDVLLRRIAGRQTCKTCGA 136


>gi|306819648|ref|ZP_07453311.1| guanylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
 gi|304552293|gb|EFM40221.1| guanylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715]
          Length = 213

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 28/175 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G  G GK T      +        V   TR P         R         
Sbjct: 3   KKGLLIVVSGPAGVGKGTLCKAYIKKFDDMKLSVSTTTRNP---------REGEKDGVE- 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIR-PALMEGKILLCDRFLDSSYAY---QGERDSSQHLF 116
                     +    +++ + +I    L+E   +  D +  +S  +   Q +  +   L 
Sbjct: 53  ----------YNFTTVENFKKMIESDDLLEYVNVF-DNYYGTSKKWVEEQIDAGNDIILE 101

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +D +  ++V++V  D  +I  LP   ++   R++NR +           R    I
Sbjct: 102 IDIVGAMNVKKVYSDAILIFLLPPSYEVLKSRLENRKTESADQIQKRLSRMTQEI 156


>gi|198277594|ref|ZP_03210125.1| hypothetical protein BACPLE_03816 [Bacteroides plebeius DSM 17135]
 gi|198270092|gb|EDY94362.1| hypothetical protein BACPLE_03816 [Bacteroides plebeius DSM 17135]
          Length = 188

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 37/218 (16%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G  I F    G+GK+T I+ LL + L         +R P GT         L      +
Sbjct: 2   AGKLIIFSAPSGSGKSTIINYLLTQNLNLAFSISATSRAPRGTEQNGVEYFFLTPEEFKQ 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLD 118
             A  E + +        E V +           DRF  +  A    Q     +    +D
Sbjct: 62  RIANDEFLEY--------EEVYK-----------DRFYGTLKAQVEKQLAAGQNVIFDVD 102

Query: 119 SLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            +   ++++   D   ++ +  P    L+ ++ R + R +   +  E        +  + 
Sbjct: 103 VVGGCNIKKFYGDRALSVFIQ-PP--SLEELRKRLTGRGTDAPEVIES-------RLAKA 152

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +++  +     IV+   + +      L  + + +Q+
Sbjct: 153 TFELSYAEKFDVVIVN--DNLEKAQEEALKTIRDFIQQ 188


>gi|170291122|ref|YP_001737938.1| nucleotide kinase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|221272212|sp|B1L726|NTPTH_KORCO RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase
          THEP1; AltName: Full=Nucleoside triphosphate
          phosphohydrolase
 gi|170175202|gb|ACB08255.1| Predicted nucleotide kinase [Candidatus Korarchaeum cryptofilum
          OPF8]
          Length = 195

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 1  MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
          M   G FI   G  G+GK+T I LL   L+     V   R P      
Sbjct: 1  MRKEGKFIII-GRPGSGKSTCIMLLLEKLRASGTKVGGIRTPELRERG 47


>gi|169656604|ref|YP_001428504.2| cytidylate kinase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|164551672|gb|ABU61548.2| cytidylate kinase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 234

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 68/249 (27%), Gaps = 71/249 (28%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF-------------------------LQRKNYDV 35
           MN+   I+ +G  G GK T    L ++                         L+ ++   
Sbjct: 14  MNNSKIITIDGPSGVGKGTLAKALAKYYDFKLLDSGAIYRLAALHCFKNNASLENEDDVC 73

Query: 36  HVTREPG-GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA--------RLDHVENVIRPA 86
              R         +      LS          E I   A+        R   +      A
Sbjct: 74  KTLRNLDISFKIEDDLVKAFLSNQDVTKDIRTEQIGMLASKVAAYPTVRAILLNKQREFA 133

Query: 87  LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
             +G  L+ D     +  +   +                          LD   +I  KR
Sbjct: 134 TEQG--LVADGRDMGTVVFPQAQYK----------------------FFLDASTEITAKR 169

Query: 147 VQNRYSLRESACLDYFER-----KDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH-SFQS 199
             +    +       FE+     K     ++ R     +A  +P     IVD++  S + 
Sbjct: 170 RYDELKTKGQKPN--FEKILADIKQRDFQDRNR----KVAPLRPANDAIIVDTSQLSIKE 223

Query: 200 VATNILNIV 208
           V  +++  +
Sbjct: 224 VFDSVIKKI 232


>gi|153874953|ref|ZP_02002963.1| signal recognition particle-docking protein FtsY [Beggiatoa sp. PS]
 gi|152068583|gb|EDN67037.1| signal recognition particle-docking protein FtsY [Beggiatoa sp. PS]
          Length = 328

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 12/113 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L +  Q + + V +    G T  A A   + +    +E    A+   
Sbjct: 133 GVNGAGKTTTIGKLAKRFQAQGHSVMLAA--GDTFRAAAVEQLKVWGERNEVPVIAQH-- 188

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               R D   +VI  AL         R +D   A    R  +Q   ++ L+++
Sbjct: 189 ---DRADS-ASVIFDALQAATA----RGIDVLIADTAGRLHTQSNLMEELKKV 233


>gi|58580586|ref|YP_199602.1| adenylate kinase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84622536|ref|YP_449908.1| adenylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|81311969|sp|Q5H4A4|KAD_XANOR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|123523026|sp|Q2P743|KAD_XANOM RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|58425180|gb|AAW74217.1| adenylate kinase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84366476|dbj|BAE67634.1| adenylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 187

 Score = 38.1 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 68/208 (32%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T E       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  +   +   G   +      ++L  +  + 
Sbjct: 52  ----VMARGDLVSDDILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALCALLSKI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLTRVDGVGSLDEVLERIRKAL 185


>gi|326387332|ref|ZP_08208942.1| hypothetical protein Y88_1382 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208513|gb|EGD59320.1| hypothetical protein Y88_1382 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 814

 Score = 38.1 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 5/64 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA--EAARHVLLSCGVDEF 62
           + I   G  GAGKTT +  L    + +     V    G    A  E  R  +L+      
Sbjct: 243 MLI---GTTGAGKTTQLRKLVTEARERGQRCVVFDLTGAFVEAFYEEGRDHILNPMDQRC 299

Query: 63  GAEA 66
               
Sbjct: 300 PPWT 303


>gi|321469998|gb|EFX80976.1| hypothetical protein DAPPUDRAFT_303689 [Daphnia pulex]
          Length = 421

 Score = 38.1 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 14/105 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV------D 60
           +   G    GKTT  S L  F +   + V    E   T  +   +   LS         +
Sbjct: 14  VVLTGGPCGGKTTGQSRLCTFFENLGWKVFRVPETASTLLSGGVKFADLSPEDAITFQEN 73

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
                 +      A  +H             I++CDR    + A+
Sbjct: 74  LLKTMIQMENTFFALAEHF--------NRDCIIICDRGTMDASAF 110


>gi|289522955|ref|ZP_06439809.1| cytidylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503498|gb|EFD24662.1| cytidylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 230

 Score = 38.1 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 1  MNSGL--FISFEGIEGAGKTTHISLLKRFL 28
          M SG    I+ +G  G+GK++    +   L
Sbjct: 1  MKSGKTIIITIDGPAGSGKSSVARRVAEEL 30


>gi|188590750|ref|YP_001921213.1| deoxyguanosIne kinase [Clostridium botulinum E3 str. Alaska E43]
 gi|188501031|gb|ACD54167.1| deoxyguanosIne kinase [Clostridium botulinum E3 str. Alaska E43]
          Length = 217

 Score = 38.1 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 25/165 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+   + GAGK++   ++         DV         P       +  +   DE   
Sbjct: 1   MLITVGAMIGAGKSSLAKIIGEHF---GTDVFYES-VDDNPILP----LFYTASDDEIQQ 52

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--------- 115
           +    +     L+     I+ AL+    +L DR +   + +         +         
Sbjct: 53  KRYPFLLQLWFLNTRFKSIKKALVNDNNVL-DRSIYEDWYFAKVNRDLGRISDLEFNIYE 111

Query: 116 -----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
                 L+ L E+  +   PD  I L    +  L R++ R    E
Sbjct: 112 ELLNNMLEELDELPKKA--PDLMIYLSGRFETILDRIRKRGRGYE 154


>gi|167036150|ref|YP_001671381.1| signal recognition particle-docking protein FtsY [Pseudomonas
           putida GB-1]
 gi|166862638|gb|ABZ01046.1| signal recognition particle-docking protein FtsY [Pseudomonas
           putida GB-1]
          Length = 510

 Score = 38.1 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ     V +    G T  A A   + +    ++    A+   
Sbjct: 313 GVNGAGKTTTIGKLAKKLQLDGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 368

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 369 TGADSASVIFDAVQAAKARGVDVLIAD 395


>gi|126303607|ref|XP_001380527.1| PREDICTED: similar to XPA binding protein 1 [Monodelphis domestica]
          Length = 383

 Score = 38.1 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59
           G+ G+GKTT +  L  +L               VH    P      +    + V+   G+
Sbjct: 34  GMAGSGKTTFVQRLTGYLHGLGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 93

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    ++   A R D V   I  +    + +L D
Sbjct: 94  GPNGGIVTSLNLFATRFDQVMKFIEKSQNMSQYVLID 130


>gi|125972918|ref|YP_001036828.1| ABC transporter related protein [Clostridium thermocellum ATCC
           27405]
 gi|125713143|gb|ABN51635.1| ABC transporter related protein [Clostridium thermocellum ATCC
           27405]
          Length = 586

 Score = 38.1 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 14/103 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH-VTREPGGTPAAEAARHVLLSCG 58
           ++  G  G+GKTT I+LL RF       ++ +  D+  +TR+          +   L  G
Sbjct: 377 VAIVGPTGSGKTTVINLLMRFYDVDSGSIKVEGIDIRNITRQSLRENYGMVLQDTWLKSG 436

Query: 59  VDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                         E  +  AA+  H  + I+        ++ 
Sbjct: 437 TIRENITMGKPDATEEEIITAAKAAHAHSFIKRLENGYDTVIS 479


>gi|328872982|gb|EGG21349.1| hypothetical protein DFA_01230 [Dictyostelium fasciculatum]
          Length = 246

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 50/153 (32%), Gaps = 17/153 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK+T  + L   L   ++      V V  +          +  LL         +
Sbjct: 51  GAPGAGKSTLSAALFTRLNDHHHHHQIKTVVVPMDGFHMDNGVLEKRGLLPRKGSPPTFD 110

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +       RL        P ++   I L DR LD S A  G  D    + L     + +
Sbjct: 111 CDGFYHLLNRLKKQTQQEEPEIL---IPLFDRKLDVSKAGAGIVDYQDEILLVEGNYLLL 167

Query: 126 QEVMP--------DCTIILDLPVDIGLKRVQNR 150
           ++  P        D TI L +       R+  R
Sbjct: 168 KDT-PWNRLANIFDFTIFLQVDRAELENRLIQR 199


>gi|325928579|ref|ZP_08189766.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate
           kinase RaxQ [Xanthomonas perforans 91-118]
 gi|325541055|gb|EGD12610.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate
           kinase RaxQ [Xanthomonas perforans 91-118]
          Length = 505

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 340 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 382

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 383 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 436

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 437 --------VFVDVPLAVAEAR 449


>gi|322828260|gb|EFZ32151.1| hypothetical protein TCSYLVIO_1516 [Trypanosoma cruzi]
          Length = 889

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 2/99 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G   +GKT+ +S L+R  ++ N++V    E      +    +++LS   +    + 
Sbjct: 365 VVITGGPCSGKTSCLSYLRRVFEKLNFNVFCVPEVATLLHSGGV-NLILSTSEERITQQR 423

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             +       D    +         ++L DR      AY
Sbjct: 424 VILQMMMMLEDAFYELAS-MRSRPSLILYDRGTMDGSAY 461


>gi|322631610|gb|EFY28366.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-1]
          Length = 419

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|319934763|ref|ZP_08009208.1| ABC transporter ATP-binding protein [Coprobacillus sp. 29_1]
 gi|319810140|gb|EFW06502.1| ABC transporter ATP-binding protein [Coprobacillus sp. 29_1]
          Length = 232

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G  I   G  G+GKTT I +L   L+     + +  +P G  + E   ++      +
Sbjct: 27  LSGGKIIGLLGPNGSGKTTLIKILNGLLKDYTGHITIDGQPIGVHSKELISYLPDEPYFE 86

Query: 61  EFGAEAEAIVFAAAR 75
            +    +A+      
Sbjct: 87  NWMTTTDALNLFNDM 101


>gi|283457582|ref|YP_003362165.1| hypothetical protein RMDY18_05130 [Rothia mucilaginosa DY-18]
 gi|283133580|dbj|BAI64345.1| uncharacterized conserved protein [Rothia mucilaginosa DY-18]
          Length = 355

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 42/159 (26%), Gaps = 45/159 (28%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG + AGK   I      L  +   V    +P      +                 
Sbjct: 127 LIIFEGRDAAGKGGSIKRFTEHLNPRGARVVALEKPTDIEQTQW---------------- 170

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + +  I+     G+I+L DR   S Y   G      +       E   
Sbjct: 171 ------------YFQRYIKHLPSGGEIVLMDR---SWYNRAGVERVMGYCTQAQYFEFMR 215

Query: 126 QEVMPDC------------TIILDLPVDIGLKRVQNRYS 152
           +  +PD                  +  +  L R  +R +
Sbjct: 216 E--VPDLERMLVNSGIHIIKFWFSVTREEQLARFTSRRT 252


>gi|265751728|ref|ZP_06087521.1| TraA protein [Bacteroides sp. 3_1_33FAA]
 gi|263236520|gb|EEZ21990.1| TraA protein [Bacteroides sp. 3_1_33FAA]
          Length = 349

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 36/145 (24%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVL 54
           M++ +F++F   +G  G GK+T  +L   +L   Q  N  V     P  +      R   
Sbjct: 97  MSNEIFVAFATQKG--GIGKSTVTALAASYLHNVQGHNVAVIDCDAPQHSIHGLRERETK 154

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           L           E++ F A   DH   + +                   AY      + +
Sbjct: 155 LID---------ESLYFKALACDHFRKIKKN------------------AYPVIASDALN 187

Query: 115 LFLDSLQEISVQEVMPDCTIILDLP 139
              D+ + ++ ++  PD     D+P
Sbjct: 188 ALDDAERMLAEEDAKPDIVF-FDMP 211


>gi|284031437|ref|YP_003381368.1| ABC transporter-like protein [Kribbella flavida DSM 17836]
 gi|283810730|gb|ADB32569.1| ABC transporter related protein [Kribbella flavida DSM 17836]
          Length = 317

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 61/213 (28%), Gaps = 32/213 (15%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---------SCGV 59
           F G  GAGKTT I LL   L   +    V   P   PA    R  +L           G 
Sbjct: 37  FLGPNGAGKTTAIRLLTTVLAADSGSFTVAGVPHTRPAQIRRRVGVLPESAGYPPAQSGE 96

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +     AE  +F   R D      R     G   L DR      AY         +    
Sbjct: 97  EWLRYHAE--LFGRDRADARGTARRLLSDVG---LADRGSALISAYSRGMRQRLGIARAL 151

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + +       PD  + LD    +GL  +     L     +       V++        L 
Sbjct: 152 VND-------PD-VVFLD-EPALGLDPMGQAQVLDLIGRIARDRGATVLLSTHV----LA 198

Query: 180 IARNQPDRCHIVD-----SAHSFQSVATNILNI 207
                 DR  I++     +  +   V       
Sbjct: 199 DVEQVCDRVVILNRGKVVAEGTVAEVVRKAAAA 231


>gi|193065946|ref|ZP_03047006.1| ABC transporter-related protein [Escherichia coli E22]
 gi|192926450|gb|EDV81084.1| ABC transporter-related protein [Escherichia coli E22]
          Length = 581

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL 28
            SG FI+  G  G+GK+T + +L R L
Sbjct: 361 RSGEFITITGKSGSGKSTLLKILARQL 387


>gi|161507209|ref|YP_001577163.1| excinuclease subunit A [Lactobacillus helveticus DPC 4571]
 gi|160348198|gb|ABX26872.1| Excinuclease subunit A [Lactobacillus helveticus DPC 4571]
          Length = 946

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRVLAQK 656


>gi|154334723|ref|XP_001563608.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060630|emb|CAM37642.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 214

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 53/206 (25%), Gaps = 57/206 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT  + L                             +   G     A+    +
Sbjct: 58  GPCGSGKTTLAAKLAAH-----------------YGIAHVSATVADVGDVAMPADMLGEL 100

Query: 71  FAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                        +    EGK  +L               D       D++ ++    + 
Sbjct: 101 -------------KGLQQEGKGWVL---------------DGFPQTRADAI-QLQTSGIS 131

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIARNQP 185
           P     L +P  + L+R                  +      K   ++     +I  +  
Sbjct: 132 PQLLFELQVPPAVALERATAHAGASSKHT------EAAAPIVKSYHLYDVRRTEIVTSYQ 185

Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211
                +D+  +   VA N++  +  L
Sbjct: 186 PFYRAIDATVTADEVAANVMKAIDTL 211


>gi|17228647|ref|NP_485195.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120]
 gi|8453093|gb|AAF75229.1|AF220507_2 cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120]
 gi|17130498|dbj|BAB73109.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120]
          Length = 293

 Score = 38.1 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 68/233 (29%), Gaps = 79/233 (33%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-----GAEAEAIV 70
           GK+  I  +  +L    ++    REP        +  + L     +          E  +
Sbjct: 11  GKSKAIKQIIEYLPESFHE---YREPF---VGGGSVFIYLKQKFPDLKIWINDLNTELFL 64

Query: 71  F----AAARLDHVENV--IRPALMEGKIL-----------LCD-----RFL--------- 99
           F     +     V+ +  I+    +GK+L           L D     RF          
Sbjct: 65  FWKIAQSDLSQLVKEIRRIKDKYQDGKLLFLELTTVDVISLSDLDRAVRFFVLNRITFSG 124

Query: 100 ------DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT----------------IILD 137
                  S  A+Q     S    L+ L+ I  +++    T                I LD
Sbjct: 125 TVESGGFSQQAFQKRFTHSSIERLEKLENILTEDIK--ITNLDYSQLLNNEQNDVFIFLD 182

Query: 138 LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
            P        ++R   ++      FE      H++    F  + +  P R  I
Sbjct: 183 -PPYYSA--TKSRLYGKDGELHTSFE------HQR----FAALLQQCPQRWLI 222


>gi|329929846|ref|ZP_08283522.1| cytidylate kinase [Paenibacillus sp. HGF5]
 gi|328935824|gb|EGG32285.1| cytidylate kinase [Paenibacillus sp. HGF5]
          Length = 226

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 73/227 (32%), Gaps = 45/227 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAARHVLLSCGVD 60
           I+ +G  GAGK+T   ++   LQ         Y            + E    VL      
Sbjct: 14  IAIDGPAGAGKSTVARMVASRLQYIYVDTGAMYRAVTWFMLNQGISPENPEKVLQHAQNM 73

Query: 61  EFGAEAEAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                 E  +      +      + P +   ++        S+   Q  R     + L  
Sbjct: 74  VI----ELKLHENGQMVWLNGEDVTPYIRSHQV--------SAVVSQYARIEGLRIKLVR 121

Query: 120 LQE-------ISVQEVMPDC--TIILDLPVDIGL-----KRVQNRYSLRESACLDYFERK 165
           LQ+       + +     D   T++ D  V I +     +R   R+       +   E+ 
Sbjct: 122 LQQQMALDKGVVMDGR--DIGTTVLPDAEVKIFMTASVKERALRRFHELSDEGI-TLEQL 178

Query: 166 DVMIHEKRRQIFLDIARN-QPDRC----HIVDSAH-SFQSVATNILN 206
           +  I E+ R   LD  R   P RC     I+D+ H     V   IL+
Sbjct: 179 ERDIAERDR---LDQEREVSPLRCAEDAIILDTTHMDINQVVEAILS 222


>gi|322695894|gb|EFY87695.1| BcatrD protein [Metarhizium acridum CQMa 102]
          Length = 1435

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 52/166 (31%), Gaps = 34/166 (20%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCG 58
            +  G      G  GAGKTT + +L  R L+ + +        P G       R   +   
Sbjct: 866  LKPGSLTVLMGATGAGKTTLLDVLAGRALRGEAHGTIFVDGRPRGATGDYQQRMGYVKQD 925

Query: 59   VDEFGAEA--EAIVFAAARLD---------------------------HVENVIRPALME 89
             +        EA+ F+A                                +  ++R     
Sbjct: 926  DNHLPTSTVREALQFSAQLRQPSTRSKSEKLAYAENEPTSGLDSQTAWSICTLLRKLADN 985

Query: 90   GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTII 135
            G  +LC     S+   Q      + L L S + +   ++ PD T++
Sbjct: 986  GHTILCTVHQPSA---QLFNQFDRLLLLRSGETVYFGDIGPDATVL 1028


>gi|260892198|ref|YP_003238295.1| ABC transporter related protein [Ammonifex degensii KC4]
 gi|260864339|gb|ACX51445.1| ABC transporter related protein [Ammonifex degensii KC4]
          Length = 393

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          + G  I F G  GAGK+T +  +   L      V++  E
Sbjct: 27 HKGELICFLGPNGAGKSTLLKTVAGLLAPLGGAVYLKGE 65


>gi|302921986|ref|XP_003053372.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734313|gb|EEU47659.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 207

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 32/151 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T  + L++ L       +                  L      
Sbjct: 22  QRGLTIWLTGLSASGKSTVATALEQHLLHLGVAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERD--SSQHLFLD 118
           FG   +     A R +++  +   A +         F D S+ A         +      
Sbjct: 65  FGLNKDLGFSEADRNENIRRISEVAKL---------FADASTIAITSFISPYKADRQVAR 115

Query: 119 SLQEISVQE---VMPDCTIILDLPVDIGLKR 146
            L   + Q     +P   + +D+P+++  +R
Sbjct: 116 ELHAQATQGGDEAIPFVEVYVDVPLEVAEQR 146


>gi|195151931|ref|XP_002016892.1| GL22014 [Drosophila persimilis]
 gi|194111949|gb|EDW33992.1| GL22014 [Drosophila persimilis]
          Length = 249

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 57/216 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  S +             T       A +  R      G +          
Sbjct: 66  GGPGAGKGTQCSKIVNRF-------LFT----HLSAGDLLREERSREGSE---------- 104

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125
                     ++I   +  GKI+   +      S      +        +D     + ++
Sbjct: 105 --------FGSLIEDYIRNGKIVPVEI----TCSLLENAMKNSGKSLFLIDGFPRNQDNL 152

Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                 M D       +  D   ++ +KR   R         D  E       +KR Q +
Sbjct: 153 DGWNRQMSDKVDVQFVLFFDCDEEVCVKRCLIRGQGGSGRSDDNLES-----LKKRIQTY 207

Query: 178 LD----IAR--NQPDRCHIVDSAHSFQSVATNILNI 207
            +    I +  +   +   +D++     V   +   
Sbjct: 208 NNDSMPIIKYFDDAGQVKRIDASPDADQVFREVERT 243


>gi|146325075|sp|Q8Y8T6|POTA_LISMO RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
          Length = 366

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT + L+  FL+     +++
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYL 67


>gi|91201958|emb|CAJ75018.1| strongly similar to guanylate kinase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 181

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 68/210 (32%), Gaps = 38/210 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  +   G  G+GKTT   +LK+    +      TR P        + H +      E  
Sbjct: 2   GKIVIISGPSGSGKTTVCKILKQQAHVEESISVTTRSPRNNEKDGESYHFVSKEKFMEMI 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E   +A     +    ++P     K                 +D    L +D    +
Sbjct: 62  KNGEFAEYAEYCGYNYGTPLKPLQEATK-----------------KDIFYLLEIDVQGAL 104

Query: 124 SVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYF---ERKDVMIHEKRRQIFL 178
            ++E  P+  +I  LP +     +R+ NR + +    ++     E++ +   +K      
Sbjct: 105 QIKEKFPEAILIFLLPPNNVTLSQRLINRNTDKAQDLVNRLKMAEKE-LEYKDKY----- 158

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                  D C +        +    I NI+
Sbjct: 159 -------DYCVV---NDDLDATVNAIRNIL 178


>gi|15642964|ref|NP_228006.1| iron(III) ABC transporter, ATP-binding protein, putative
          [Thermotoga maritima MSB8]
 gi|4980687|gb|AAD35283.1|AE001704_4 iron(III) ABC transporter, ATP-binding protein, putative
          [Thermotoga maritima MSB8]
          Length = 258

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
            G  I+  G  GAGK+T +  +   L+ +  ++ 
Sbjct: 25 QKGELIAILGPNGAGKSTLLKCIAGILKCQGVEIF 59


>gi|70984523|ref|XP_747768.1| ABC multidrug transporter [Aspergillus fumigatus Af293]
 gi|66845395|gb|EAL85730.1| ABC multidrug transporter, putative [Aspergillus fumigatus Af293]
          Length = 1287

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F++F G  G GK+T I+LL RF      Y     R        +  R + L
Sbjct: 1066 GKFVAFVGPSGCGKSTMINLLARFYDPTSGYIAVNDRPIHDLSPQDHRRRLAL 1118


>gi|23011698|ref|ZP_00051982.1| COG1102: Cytidylate kinase [Magnetospirillum magnetotacticum MS-1]
          Length = 212

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 77/239 (32%), Gaps = 49/239 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------VTREPGGTPAAEAARHV 53
           M++   ++  G  G+GKTT    L   L      V        +T  P    A    R  
Sbjct: 1   MSAPFVLAVAGPPGSGKTTLSRALAERL--GGAPVLSYDAYEEITGWPPERVAEWLRRGA 58

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
            L        AE  A +    R + V     P    G IL               R    
Sbjct: 59  ALDEVPVPGLAEDLARL---RRGEPV-----PDRERGGIL-----------RPSRRGGRP 99

Query: 114 HLFLDSLQEISVQEV--MPDCTIILDLPVDIGLKRV------QNRYS-----LRESACLD 160
            + LD+L   +        D  + LDLP+D+ L R       + R           A   
Sbjct: 100 VIVLDTLLGRAHPGTGAQIDHLVWLDLPLDVALARKLRSFTGEARQDPAAAPALLGALDA 159

Query: 161 YFERKDVMIHEKRRQIFLDIARNQP--DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
           Y  R D ++H       L  AR +P  DR     +A +       IL+ + + +  R +
Sbjct: 160 YLGRYDSLLHPTYA---LQRARIRPGADRIL---AAGTLAEYLAAILSDLPDALTPRTA 212


>gi|297181002|gb|ADI17203.1| hypothetical protein [uncultured delta proteobacterium
           HF0070_10I02]
          Length = 345

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT I  L      +   V +    G T  A A     L    +       A  
Sbjct: 143 GVNGSGKTTTIGKLAHQYTEQGKKVLLAA--GDTFRAGAIEQ--LQVWGERVNIPVIAHQ 198

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I+  +     +++CD
Sbjct: 199 EGADPAAVIYDGIQAGIARKMDVVICD 225


>gi|299139152|ref|ZP_07032328.1| adenylate kinase [Acidobacterium sp. MP5ACTX8]
 gi|298598832|gb|EFI54994.1| adenylate kinase [Acidobacterium sp. MP5ACTX8]
          Length = 235

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 63/230 (27%), Gaps = 51/230 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GK T   LL       N     T         +  R           G       
Sbjct: 20  GAPGVGKGTQAKLLMDEF---NIPQIST--------GDLLRE--HRRNHTPLG------- 59

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLD--SSYAYQGERDSSQHLFLDSLQEISVQEV 128
             A  L     ++   L+   + +  RF D  + + Y  +         + L    V  +
Sbjct: 60  MLADELMSQGKLVPDDLVNQMVAV--RFQDPDTQHGYILDGFPRTLNQAEWLDGQLVAYL 117

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLD-----------------YFERKDVM--- 168
           +P   + + +   + L+R+  R         +                   E++      
Sbjct: 118 LPVVAVNIVVDEKVLLERITGRRISPAGRIYNIYTTPPKVEGICDVDGSKLEQRADDTEE 177

Query: 169 -IHEKRR------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             HE+ +         ++  R+  +R   VD       V   I   + +L
Sbjct: 178 VFHERMKTFRVKTAAVIEYYRSHGNRFAEVDGDRPVDEVTKGIRAALLKL 227


>gi|297531066|ref|YP_003672341.1| spermidine/putrescine ABC transporter ATPase [Geobacillus sp.
          C56-T3]
 gi|297254318|gb|ADI27764.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus
          sp. C56-T3]
          Length = 353

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M  G F +  G  G GKTT + L+  F++
Sbjct: 29 MERGKFYTLLGPSGCGKTTILRLIAGFIE 57


>gi|292654598|ref|YP_003534495.1| P-loop ATPase of the PilT family [Haloferax volcanii DS2]
 gi|291370634|gb|ADE02861.1| P-loop ATPase of the PilT family [Haloferax volcanii DS2]
          Length = 626

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T    +  FL   +Y V    +P                G   
Sbjct: 260 QRGVLIA--GSPGAGKSTFAQAVAEFLNDSDYAVKTMEKPRDLQVGPDITQYTALGGDMA 317

Query: 62  FGAEAEAI 69
             A++  +
Sbjct: 318 KTADSLLL 325


>gi|260102500|ref|ZP_05752737.1| excision endonuclease subunit UvrA [Lactobacillus helveticus DSM
           20075]
 gi|260083705|gb|EEW67825.1| excision endonuclease subunit UvrA [Lactobacillus helveticus DSM
           20075]
          Length = 967

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 649 GKFIVVSGVSGSGKSTLVNMILKRVLAQK 677


>gi|255531917|ref|YP_003092289.1| ABC transporter-like protein [Pedobacter heparinus DSM 2366]
 gi|255344901|gb|ACU04227.1| ABC transporter related [Pedobacter heparinus DSM 2366]
          Length = 605

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 17/27 (62%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           M SG  I+  G+ GAGK+T I LL R 
Sbjct: 382 MPSGKIIAVVGMNGAGKSTLIKLLCRL 408


>gi|261418969|ref|YP_003252651.1| spermidine/putrescine ABC transporter ATPase [Geobacillus sp.
          Y412MC61]
 gi|319765786|ref|YP_004131287.1| spermidine/putrescine ABC transporter ATPase [Geobacillus sp.
          Y412MC52]
 gi|261375426|gb|ACX78169.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus
          sp. Y412MC61]
 gi|317110652|gb|ADU93144.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus
          sp. Y412MC52]
          Length = 353

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M  G F +  G  G GKTT + L+  F++
Sbjct: 29 MERGKFYTLLGPSGCGKTTILRLIAGFIE 57


>gi|126305561|ref|XP_001375190.1| PREDICTED: similar to Deoxyguanosine kinase [Monodelphis domestica]
          Length = 277

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 79/245 (32%), Gaps = 48/245 (19%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQR-----------KNYDVHVTREPGGTP---AAEAARHV 53
           + EG    GK+T + LL +               +N     T  P   P          +
Sbjct: 41  AVEGNIAVGKSTFVKLLVKTFPEWHIAAEPITTWQNIQAVGT--PTAGPPQSVGNLLDMM 98

Query: 54  LLSCGVDEFGAEAEAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
                   +  +  +++       A   + +    +P  +  + +  DR++ +   ++  
Sbjct: 99  YQQPSRWSYTFQTFSLLSRLKAQLAPSPERLWQAQQPMHVFERTVYSDRYIFAKNLFENR 158

Query: 109 RDSSQHLFLDS------LQEIS----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157
             +     +        LQE +    +        I L     I LKR+  R  + E   
Sbjct: 159 FLNDVEWAIYQNWHSFLLQEFTSHMLLDGF-----IYLQAAPQICLKRLHRRARVEEKGL 213

Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA---TNILNIVW 209
            L Y E+     +D  IH K  ++  +  +  P    ++D    F  VA     ++  V 
Sbjct: 214 ELGYLEQLHAQHEDWFIH-KVTELHFEHLKKTP--VLVLDVNEDFSEVAAKQEELMRKVN 270

Query: 210 ELVQK 214
             V+ 
Sbjct: 271 SFVKD 275


>gi|78044915|ref|YP_361478.1| adenylylsulfate kinase [Carboxydothermus hydrogenoformans Z-2901]
 gi|77997030|gb|ABB15929.1| adenylylsulfate kinase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 34/148 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I   G+ G+GK+T    L+  L R+    +                 +L      
Sbjct: 23  QKGVVIWLTGLSGSGKSTIARELEAVLYRQGKLAY-----------------VLDGDNIR 65

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +       R +++     V +  +  G I++         A+     + +     
Sbjct: 66  MGLNKDLGFSEKDRQENIRRIGEVAKLFVDAGIIVIT--------AFISPFRADRDKVRS 117

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            L   + + +     + +D P+++   R
Sbjct: 118 IL--PAGKFIE----VFVDCPLEVCEAR 139


>gi|56419258|ref|YP_146576.1| spermidine/putrescine ABC transporter ATP-binding protein
          [Geobacillus kaustophilus HTA426]
 gi|81347960|sp|Q5L222|POTA_GEOKA RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|56379100|dbj|BAD75008.1| spermidine/putrescine ABC transporter (ATP-binding protein)
          [Geobacillus kaustophilus HTA426]
          Length = 353

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M  G F +  G  G GKTT + L+  F++
Sbjct: 29 MERGKFYTLLGPSGCGKTTILRLIAGFIE 57


>gi|121999128|ref|YP_001003915.1| adenylyl-sulfate kinase [Halorhodospira halophila SL1]
 gi|121590533|gb|ABM63113.1| adenylylsulfate kinase [Halorhodospira halophila SL1]
          Length = 199

 Score = 38.1 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L+  L +  +                    LL       G   +  +
Sbjct: 34  GLSGSGKSTLANALEHALHQCGHH-----------------SFLLDGDNIRHGLNRDLDL 76

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
             A R +++     V R  L  G I++ 
Sbjct: 77  STAGRQENIRRIGEVTRLLLDAGLIVVT 104


>gi|326427992|gb|EGD73562.1| hypothetical protein PTSG_05269 [Salpingoeca sp. ATCC 50818]
          Length = 2003

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N GL I+  G  G GK++ ++     L  ++    V+   G  P +     +L+      
Sbjct: 604 NKGLLIT--GPAGVGKSSLVAKAAEQLNARDNVDVVSFFVGTNPESFDLLEMLIFLIHQL 661

Query: 62  FGAEAEAIVFAAARLDHV 79
               A    F   +L  +
Sbjct: 662 DKLRAVPFYFEKNKLQSI 679


>gi|325282661|ref|YP_004255202.1| Adenylate kinase [Deinococcus proteolyticus MRP]
 gi|324314470|gb|ADY25585.1| Adenylate kinase [Deinococcus proteolyticus MRP]
          Length = 200

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 66/210 (31%), Gaps = 30/210 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + F G  GAGK T    L                       +  R        +    + 
Sbjct: 9   VIFLGPPGAGKGTQAERLAAA-----------YGLTKVSTGDILRD---HVARETALGQQ 54

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCD--RFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A + AA     V + I  AL+  +I   +  R +   +     + ++  L L+ L    
Sbjct: 55  VAPILAAG--QLVPDDILVALIRDRICTMEPVRIIFDGFPRTQAQANALDLLLEELGAPV 112

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180
                    ++L++P +  + R+  R     +A           +  +R++++      +
Sbjct: 113 SAA------VLLEVPDEELIGRIVERGRQAAAAGEPVRSDDTEEVARRRQEVYRQETAPL 166

Query: 181 ARNQP--DRCHIVDSAHSFQSVATNILNIV 208
             +     R   VD   +   V   I  ++
Sbjct: 167 IEHYQRTGRLTEVDGTGTMDEVYARIEQVI 196


>gi|315927340|gb|EFV06684.1| polyphosphate kinase 2 domain protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 261

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 52  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123


>gi|256828204|ref|YP_003156932.1| signal recognition particle-docking protein FtsY [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577380|gb|ACU88516.1| signal recognition particle-docking protein FtsY [Desulfomicrobium
           baculatum DSM 4028]
          Length = 524

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 18/133 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I+ L    Q +   V V    G T  A A     L       GA   A  
Sbjct: 330 GVNGAGKTTTIAKLAHRAQMQGRKVLVAA--GDTFRAAAIEQ--LQVWSKRVGAGFYAKA 385

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS--VQEV 128
             +         +  A+ EG  L+   F+D+       R  ++H  ++ L++I+  + + 
Sbjct: 386 HGSDPAAVAFEAVEYAMKEGYDLV---FVDT-----AGRLQTKHNLMEELKKINRVLGKK 437

Query: 129 M---PDCTII-LD 137
           +   P  TI+ LD
Sbjct: 438 LEGAPHRTILVLD 450


>gi|224049523|ref|XP_002196843.1| PREDICTED: 3'-phosphoadenosine 5'-phosphosulfate synthase 1
           [Taeniopygia guttata]
          Length = 603

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 38  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ + I     +P
Sbjct: 84  ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 132 FFEVFVDAPLHVCEQR 147


>gi|223673939|pdb|3CR7|A Chain A, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
           From Penicillium Chrysogenum: Ternary Structure With Adp
           And Paps
 gi|223673940|pdb|3CR7|B Chain B, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
           From Penicillium Chrysogenum: Ternary Structure With Adp
           And Paps
 gi|223673941|pdb|3CR7|C Chain C, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
           From Penicillium Chrysogenum: Ternary Structure With Adp
           And Paps
 gi|223673942|pdb|3CR7|D Chain D, Crystal Structure Of N-Terminal Truncation Of Aps Kinase
           From Penicillium Chrysogenum: Ternary Structure With Adp
           And Paps
          Length = 197

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 31/151 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T    L+  L  ++  VH  R               L      
Sbjct: 1   QRGLTIWLTGLSASGKSTLAVELEHQLV-RDRRVHAYR---------------LDGDNIR 44

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118
           FG   +     A R +++  +   A +         F DS S A                
Sbjct: 45  FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNSIAITSFISPYRKDRDTAR 95

Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKR 146
            L E++       +P   + +D+PV++  +R
Sbjct: 96  QLHEVATPGEETGLPFVEVYVDVPVEVAEQR 126


>gi|254501089|ref|ZP_05113240.1| sulfate adenylyltransferase, large subunit subfamily, putative
           [Labrenzia alexandrii DFL-11]
 gi|222437160|gb|EEE43839.1| sulfate adenylyltransferase, large subunit subfamily, putative
           [Labrenzia alexandrii DFL-11]
          Length = 644

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 40/202 (19%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  SL+++ L  +    +                  L       G   + 
Sbjct: 467 FTGLSGSGKSTIASLVEKRLHAEGRHTYT-----------------LDGDNVRHGLNRDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
               A R++++  V   A      L+ D  L +  ++     S + +  D + E    E 
Sbjct: 510 GFTDADRVENIRRVGEVA-----TLMSDAGLITLVSFISPFRSERQMARDLMGE---GEF 561

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD-R 187
                + +D P++   KR                E  ++         +   A   P+ R
Sbjct: 562 ---IEVFVDTPIEECKKR-------DPKGLYAKAEAGEIKNFTGIDSPYE--APENPEIR 609

Query: 188 CHIVDSAHSFQSVATNILNIVW 209
            H V      + VA  I+  + 
Sbjct: 610 IHNV--GRPPEEVADEIVAYLR 629


>gi|257076819|ref|ZP_05571180.1| signal recognition particle receptor FtsY [Ferroplasma acidarmanus
           fer1]
          Length = 311

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 18/139 (12%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60
                I F GI G GKTT I  L  +L+  N  V ++     T  A A   + +L+  V 
Sbjct: 113 KKPFVILFLGINGTGKTTTIGKLAYYLKSNNKSVVLSA--SDTFRAGAIDQLNILAGNVG 170

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + +   F +       + I  A       +L D            R  +    LD 
Sbjct: 171 VEIIKHD---FRSDPASVAFDAIEHAKARKMDYVLID---------SAGRMQTNKNLLDE 218

Query: 120 LQEISVQEVMPDCTII-LD 137
           +++I  +   PD TI+ LD
Sbjct: 219 MKKI-KRVAKPDMTILVLD 236


>gi|86358496|ref|YP_470388.1| ABC transporter ATP-binding protein [Rhizobium etli CFN 42]
 gi|86282598|gb|ABC91661.1| probable ABC transporter, ATP-binding protein [Rhizobium etli CFN
          42]
          Length = 353

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLK 25
          MN   G FISF G  G GKTT + ++ 
Sbjct: 24 MNIEKGEFISFLGPSGCGKTTVLRMIA 50


>gi|78043241|ref|YP_359260.1| iron compound ABC transporter ATP-binding protein
          [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995356|gb|ABB14255.1| iron compound ABC transporter, ATP-binding protein
          [Carboxydothermus hydrogenoformans Z-2901]
          Length = 399

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + G F    G  GAGKTT + +L   L+ K   V
Sbjct: 25 HPGKFTVIIGPNGAGKTTLLKILAGLLKPKYGTV 58


>gi|50121814|ref|YP_050981.1| hypothetical protein ECA2890 [Pectobacterium atrosepticum
          SCRI1043]
 gi|49612340|emb|CAG75790.1| hypothetical protein ECA2890 [Pectobacterium atrosepticum
          SCRI1043]
          Length = 172

 Score = 38.1 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          FI  EG  G+GKTT  + L  +L  K  D
Sbjct: 25 FICIEGHTGSGKTTLGTSLSEYLNAKLID 53


>gi|330808248|ref|YP_004352710.1| Heme-transporting ATPase (cytochrome C biogenesis ATP-binding
          export protein) [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
 gi|327376356|gb|AEA67706.1| Heme-transporting ATPase (cytochrome C biogenesis ATP-binding
          export protein) [Pseudomonas brassicacearum subsp.
          brassicacearum NFM421]
          Length = 179

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 4/85 (4%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEFGA 64
            G  G+GKT+ + LL   +Q     V +  +P  +  +E AR++L         D    
Sbjct: 4  ISGPNGSGKTSLLRLLAGLMQPTAGQVLLNGQPLHSQRSELARNLLWIGHAAGIKDLLTP 63

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
          E       A         I  AL  
Sbjct: 64 EENLSWLCALHTPAGREAIWQALAA 88


>gi|320645358|gb|EFX14367.1| Thymidylate kinase [Escherichia coli O157:H- str. 493-89]
 gi|320650671|gb|EFX19128.1| Thymidylate kinase [Escherichia coli O157:H- str. H 2687]
          Length = 252

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +  GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDDTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPTLWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + ++  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193


>gi|319891526|ref|YP_004148401.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161222|gb|ADV04765.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 221

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 28/176 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK++    +   L  +            T       +  L     +F   +
Sbjct: 12  ITIAGTVGVGKSSLTRAIAEKLNFR------------TSYENVEHNPYLDKFYHDFKRWS 59

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFLDS 119
             +       +  +   R     G  +  DR +          +  QG           +
Sbjct: 60  FHLQMY-FLAERFKEQKRMFEYGGGFV-QDRSIYEDVDIFAKMHVEQGTMTPEDFKTYSN 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHE 171
           L E   ++     PD  I L+   +  L+R+Q R    E     +Y+E   ++   
Sbjct: 118 LFEAMVLTPYFPKPDVLIYLESDYEAVLERIQARGRQMEIETDPEYWE---MLFQR 170


>gi|291284367|ref|YP_003501185.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|290764240|gb|ADD58201.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|320656367|gb|EFX24274.1| Thymidylate kinase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661739|gb|EFX29147.1| Thymidylate kinase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666890|gb|EFX33866.1| Thymidylate kinase [Escherichia coli O157:H7 str. LSU-61]
          Length = 252

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 36/174 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            I+  G +  GK+T  + L + LQ      + Y   ++ E G          V L   + 
Sbjct: 23  LIAVVGCDDTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82

Query: 61  EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103
              ++ +++               F+  R+ ++  V R A   G +++ DRF     S +
Sbjct: 83  AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141

Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            Y G     +                  Q+++     P+  I L + ++  + R
Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193


>gi|290561667|gb|ADD38233.1| Deoxynucleoside kinase [Lepeophtheirus salmonis]
          Length = 236

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 15/170 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN----YDVHVTREPGGTPAAEAARHVL-- 54
           M +   +  EG   +GKTT + L    LQ           V  EP  +       ++L  
Sbjct: 1   MKNRFTVCVEGNIASGKTTFLKLFNSNLQFDKELPQVSCKVIEEPVPSWQNLCGHNILEM 60

Query: 55  LSCGVDEFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           +      +G   ++ V       H   ++  I+  LME  +L  +R   ++    G    
Sbjct: 61  MYKDPHRWGHLFQSYVTLTMTQAHTLQIKESIK--LMERSLLTAERCFAANLYCSGIMSK 118

Query: 112 SQHLFL-DSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
            ++L L +    ++      V  D  + L    +   KR  +R    ESA
Sbjct: 119 PEYLVLKEWYAYLNSHPKINVSADLIVYLRTTPETCFKRTISRSRTEESA 168


>gi|261402771|ref|YP_003246995.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus vulcanius M7]
 gi|261369764|gb|ACX72513.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus vulcanius M7]
          Length = 251

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 57/197 (28%), Gaps = 45/197 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61
           + I   G+   GK+T    L   L +   DV V         ++  R           + 
Sbjct: 1   MLIILTGLPSVGKSTFSKKLAEILNKLGIDVIVL-------GSDMLRESFPAWRESYEEF 53

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                  +             I  AL E   ++ D   D++Y Y   R    ++   + +
Sbjct: 54  IRKNTLYL-------------IENALKE-YWVIVD---DTNY-YNSMRRDLINIAKKNEK 95

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             ++        I L  P++  L+R   R     +  +    +K      K R       
Sbjct: 96  NYAI--------IYLRAPLNTLLQRNVKRGEKIPNEVIVEMYKKFDEPGRKYR------- 140

Query: 182 RNQPDRCHIVDSAHSFQ 198
               +    VD+     
Sbjct: 141 --WDEPFLTVDTTKEID 155


>gi|260942839|ref|XP_002615718.1| hypothetical protein CLUG_04599 [Clavispora lusitaniae ATCC
          42720]
 gi|238851008|gb|EEQ40472.1| hypothetical protein CLUG_04599 [Clavispora lusitaniae ATCC
          42720]
          Length = 215

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           I+  GI GAGK+T +  L + L +++    V  + G     E  
Sbjct: 26 LIAIAGIPGAGKSTLVERLAQELIQRDITCKVFPQDGYHYYREQL 70


>gi|224541971|ref|ZP_03682510.1| hypothetical protein CATMIT_01144 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525111|gb|EEF94216.1| hypothetical protein CATMIT_01144 [Catenibacterium mitsuokai DSM
           15897]
          Length = 940

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 6/51 (11%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G FI+  G+ G+GK+T ++ +L + L+ K   V+ +RE  G    +  R +
Sbjct: 634 GKFIAVTGVSGSGKSTLVNDILCKALRAK---VYRSRELPGKH--KEIRGI 679


>gi|154253504|ref|YP_001414328.1| sulfate adenylyltransferase large subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|154157454|gb|ABS64671.1| sulfate adenylyltransferase, large subunit [Parvibaculum
           lavamentivorans DS-1]
          Length = 639

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 17/74 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L++ L  K Y+V                  +L       G  A  
Sbjct: 473 FTGLSGAGKSTLAVALEKKLFEKGYNVF-----------------VLDGDNVRHGLNANL 515

Query: 69  IVFAAARLDHVENV 82
                 R +++  V
Sbjct: 516 SFSPEDRAENIRRV 529


>gi|50913781|ref|YP_059753.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS10394]
 gi|94993818|ref|YP_601916.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS10750]
 gi|50902855|gb|AAT86570.1| Dephospho-CoA kinase [Streptococcus pyogenes MGAS10394]
 gi|94547326|gb|ABF37372.1| Dephospho-CoA kinase [Streptococcus pyogenes MGAS10750]
          Length = 206

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 72/226 (31%), Gaps = 44/226 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH-----V 53
           + I   G   +GK+T + ++    ++  Y       V    +  G    EA R      +
Sbjct: 10  MIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFGNQI 65

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           L + G  +    +E +      +         +I+  L   +             +  + 
Sbjct: 66  LKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HLAQS 113

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         +    
Sbjct: 114 QAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ---- 168

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   L I   +P    ++D+    +++   + + +  L   R
Sbjct: 169 --------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 206


>gi|16125729|ref|NP_420293.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Caulobacter crescentus CB15]
 gi|221234486|ref|YP_002516922.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Caulobacter crescentus NA1000]
 gi|13422853|gb|AAK23461.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase
           [Caulobacter crescentus CB15]
 gi|220963658|gb|ACL95014.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Caulobacter crescentus NA1000]
          Length = 635

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +L+++ L       +                 LL       G   +   
Sbjct: 467 GLSGAGKSTIANLVEKRLHALGRHTY-----------------LLDGDNVRHGLNKDLGF 509

Query: 71  FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R++    V  V +  +  G I+L         A+     + + L  D L+     E
Sbjct: 510 TEEDRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRAERQLARDLLE---PGE 558

Query: 128 VMPDCTIILDLPVDIGLKR 146
                 + +D P+ +   R
Sbjct: 559 F---IEVFVDTPLAVAEAR 574


>gi|77411950|ref|ZP_00788280.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
 gi|77161976|gb|EAO72957.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
          Length = 195

 Score = 38.1 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 77/225 (34%), Gaps = 50/225 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ +G    GKTT + ++      K Y          +P  +      L    ++   
Sbjct: 1   MIIAIQGGMAVGKTTALKII-----EKVYPKIAISFEDISPVVDKINKHQLD--NNKLDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114
             E        + H  +     + + +I+L D          ++      Y     S+  
Sbjct: 54  YCEIQQLF---IQHERDRYE-LVRDNEIVLMDYGAEEIAFYTQYFPKVAGYSWTLPSNLL 109

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR- 173
           L ++ L+E        D  I LD    +  +R +N ++ R                +   
Sbjct: 110 LEVNRLKECFA-----DYIIFLDADKTVLYQRQKNDFNRRRH------------FFKWYT 152

Query: 174 ------RQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
                 ++ +LD      +  H +++ H + + VA  I++I+ +L
Sbjct: 153 HHLLPAKKHYLD---TFSNVIH-INTNHLNAEEVAEKIIDIIRKL 193


>gi|328949164|ref|YP_004366501.1| sugar ABC transporter ATPase [Treponema succinifaciens DSM 2489]
 gi|328449488|gb|AEB15204.1| Monosaccharide-transporting ATPase [Treponema succinifaciens DSM
          2489]
          Length = 705

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          + G +I+  G+ G+GK+T   L+  F +    +V 
Sbjct: 29 SQGEYIAILGLNGSGKSTLARLIAGFFEPLKGEVI 63



 Score = 35.0 bits (80), Expect = 7.6,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 16/41 (39%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           +  G  ++  G  G GK+T    L    + +   ++    P
Sbjct: 270 LKKGTLVALTGPSGCGKSTLFECLAGLKKNQGGKIYALSRP 310


>gi|325970043|ref|YP_004246234.1| polyamine-transporting ATPase [Spirochaeta sp. Buddy]
 gi|324025281|gb|ADY12040.1| Polyamine-transporting ATPase [Spirochaeta sp. Buddy]
          Length = 375

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G F++  G  G GK+T + ++  FL+    +V +  +P  T      R++
Sbjct: 42 GEFVTLIGPSGCGKSTTLRIIAGFLKPSGGEVLLEGKPI-THLGPQDRNI 90


>gi|323473907|gb|ADX84513.1| ABC transporter related protein [Sulfolobus islandicus REY15A]
 gi|323477060|gb|ADX82298.1| ABC transporter related protein [Sulfolobus islandicus HVE10/4]
          Length = 285

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVL 54
          FI   G  GAGKTT I +L   L++    V V  E P   P       V+
Sbjct: 33 FI---GPNGAGKTTTIKILAGLLRKDGGKVKVFGEDPWDNPKVIEMISVI 79


>gi|258546171|ref|ZP_05706405.1| signal recognition particle-docking protein FtsY [Cardiobacterium
           hominis ATCC 15826]
 gi|258518596|gb|EEV87455.1| signal recognition particle-docking protein FtsY [Cardiobacterium
           hominis ATCC 15826]
          Length = 428

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L R+ Q++   V +
Sbjct: 232 GINGAGKTTTIGKLARYFQQEGKKVML 258


>gi|255326876|ref|ZP_05367952.1| polyphosphate kinase 2 [Rothia mucilaginosa ATCC 25296]
 gi|255296093|gb|EET75434.1| polyphosphate kinase 2 [Rothia mucilaginosa ATCC 25296]
          Length = 355

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 42/159 (26%), Gaps = 45/159 (28%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG + AGK   I      L  +   V    +P      +                 
Sbjct: 127 LIIFEGRDAAGKGGSIKRFTEHLNPRGARVVALEKPTDIEQTQW---------------- 170

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + +  I+     G+I+L DR   S Y   G      +       E   
Sbjct: 171 ------------YFQRYIKHLPSGGEIVLMDR---SWYNRAGVERVMGYCTQAQYFEFMR 215

Query: 126 QEVMPDC------------TIILDLPVDIGLKRVQNRYS 152
           +  +PD                  +  +  L R  +R +
Sbjct: 216 E--VPDLERMLVNSGIHIIKFWFSVTREEQLARFTSRRT 252


>gi|254523215|ref|ZP_05135270.1| small GTP-binding domain protein [Stenotrophomonas sp. SKA14]
 gi|219720806|gb|EED39331.1| small GTP-binding domain protein [Stenotrophomonas sp. SKA14]
          Length = 173

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 9/107 (8%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T +  L      +   V            +    V +  G  +        +
Sbjct: 2   GPLGAGKSTLVQTLT-----RGKAVVTEARNTDPAVGKQYTTVAMDYGDIDLPGGDRLRL 56

Query: 71  FAA--ARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQ 113
           + +           I  A  EG I+L D    +DS+ A Q  R  + 
Sbjct: 57  YGSPGQERFSYIWPILLAGAEGAIVLIDGSAGVDSTLAGQHLRAIAD 103


>gi|217977354|ref|YP_002361501.1| protein of unknown function DUF344 [Methylocella silvestris BL2]
 gi|217502730|gb|ACK50139.1| protein of unknown function DUF344 [Methylocella silvestris BL2]
          Length = 278

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 45/155 (29%), Gaps = 43/155 (27%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG +GAGK   I  L   +  + + V     P     ++      L           
Sbjct: 56  IVFEGRDGAGKGGAIKALTERVSPRTFKVIALAAPTDREKSQMYIQRYL----------- 104

Query: 67  EAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                             P L   G++++ DR   S Y   G          +  ++   
Sbjct: 105 ------------------PHLPAAGEVVIFDR---SWYNRAGVERVMGFCSDEHAEQFLT 143

Query: 126 QEVMPDCTI----------ILDLPVDIGLKRVQNR 150
                +  I           L++  +   +R+ +R
Sbjct: 144 MTPAVEKAIIQSGVILLKYWLEVSPEEQTRRLSSR 178


>gi|182434720|ref|YP_001822439.1| putative ABC transporter ATP-binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326775237|ref|ZP_08234502.1| Taurine-transporting ATPase [Streptomyces cf. griseus XylebKG-1]
 gi|178463236|dbj|BAG17756.1| putative ABC transporter ATP-binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326655570|gb|EGE40416.1| Taurine-transporting ATPase [Streptomyces cf. griseus XylebKG-1]
          Length = 276

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 15/76 (19%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--------------- 48
           G FI+  G  G GK+T + L+   L   + +V +  E    P  +               
Sbjct: 53  GEFIAIVGPSGCGKSTLLKLVAGLLTASSGEVLLGGERVTGPRHDIGYVFQRAALLEWRS 112

Query: 49  AARHVLLSCGVDEFGA 64
           A R++LL   +     
Sbjct: 113 ALRNILLQAEIRRLEP 128


>gi|170291208|ref|YP_001738024.1| ATPase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175288|gb|ACB08341.1| AAA ATPase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 529

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+ I+  G  GAGKTT  S L  F + +   V     P         
Sbjct: 252 GILIA--GPPGAGKTTFASALAEFYKERGRIVKTLESPRDLQVGPEI 296


>gi|153954424|ref|YP_001395189.1| hypothetical protein CKL_1799 [Clostridium kluyveri DSM 555]
 gi|229484853|sp|A5N960|CYSC_CLOK5 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|146347305|gb|EDK33841.1| CysC [Clostridium kluyveri DSM 555]
          Length = 199

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 29/145 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G+ I F G+ G+GK+T  S L+  L       +                 LL      
Sbjct: 26  QNGILIWFTGLSGSGKSTIASELEMRLYNMGRLTY-----------------LLDGDNVR 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  +        R++++              +C  F+DS         S      D ++
Sbjct: 69  HGLNSNLGFTKEDRIENIRRTAE---------VCKLFVDSGIITISTFISPFKDDRDKVR 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
           ++  ++ +    + +D P+++   R
Sbjct: 120 KLLGKDFVE---VYVDCPLEVCESR 141


>gi|116629415|ref|YP_814587.1| guanylate kinase [Lactobacillus gasseri ATCC 33323]
 gi|311110935|ref|ZP_07712332.1| guanylate kinase [Lactobacillus gasseri MV-22]
 gi|116094997|gb|ABJ60149.1| guanylate kinase [Lactobacillus gasseri ATCC 33323]
 gi|311066089|gb|EFQ46429.1| guanylate kinase [Lactobacillus gasseri MV-22]
          Length = 204

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 36/213 (16%)

Query: 2   NSGLFISFEGIEGAGKTTH-ISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           + GL +   G  G GK T   +++K+      Y V   TR+P          + +     
Sbjct: 3   HQGLLLVLSGPSGVGKGTVKSAMVKQKAFSFEYSVSMTTRKPRPGEVDGKDYYFVSEDRF 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            E   + E + +     +H    + P    L EGK +L +  +D + A Q          
Sbjct: 63  QEAIKDNELLEYNEYVGNHYGTPLAPVQKMLKEGKDVLLE--IDVNGAKQ---------- 110

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                   V+++MPD   I   P D  L  +++R   R +         D +I  + +Q 
Sbjct: 111 --------VRKLMPDGVFIFLTPPD--LHELKHRIVNRGTDS-------DKVIAMRMKQA 153

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
             +I   +     +V+   +  +V  +I +IV 
Sbjct: 154 RKEILMMEDYDYAVVN--DTVANVVDHIKSIVE 184


>gi|308799549|ref|XP_003074555.1| UMPK_ARATH Uridylate kinase (ISS) [Ostreococcus tauri]
 gi|116000726|emb|CAL50406.1| UMPK_ARATH Uridylate kinase (ISS) [Ostreococcus tauri]
          Length = 161

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 8/76 (10%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQPDR 187
           D  +  D P D+   R+  R   R    ++  +++ V   E        +  +     ++
Sbjct: 82  DFVLFFDCPEDVMTTRLLGRNEGRSDDNIETIKKRFVTFRESSLPVINYYEKL-----NK 136

Query: 188 CHIVDSAHSFQSVATN 203
              V+S  S + V   
Sbjct: 137 VCTVNSDQSPEDVYAQ 152


>gi|88604155|ref|YP_504333.1| ATPase [Methanospirillum hungatei JF-1]
 gi|88189617|gb|ABD42614.1| ATPase, PilT family [Methanospirillum hungatei JF-1]
          Length = 655

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
             G+ I+  G  G GKTT    +  +L  +   +    +P
Sbjct: 260 KPGILIT--GPPGCGKTTLAQAIATYLCDEGVIIKTMEQP 297


>gi|33866618|ref|NP_898177.1| adenylate kinase [Synechococcus sp. WH 8102]
 gi|46396094|sp|Q7U4I1|KAD_SYNPX RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|33633396|emb|CAE08601.1| Adenylate kinase [Synechococcus sp. WH 8102]
          Length = 183

 Score = 38.1 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 44/217 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M S L   F G  GAGK T  + L             T   G    +E A    L    +
Sbjct: 1   MKSRLL--FLGPPGAGKGTQAARLC---NANGMSHLST---GDLLRSEVAAGTALGQEAE 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E  + + A +  +       L  G  LL            G   +      D+L
Sbjct: 53  AVMNRGE--LVSDALVLAIVESQLKGLSSGGWLL-----------DGFPRTVPQA--DAL 97

Query: 121 QEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL--DYFE--RKD----VMIHE 171
           + +  +   P +  ++L+L   + ++R+  R    ++  +  +  E  R+     +  + 
Sbjct: 98  EPLLDELKQPIEAVVLLELDDAVLIERLLARGRDDDNEAVIRNRLEVYREKTSPLISFYR 157

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                              V++  S + +   I  ++
Sbjct: 158 ------------DKGLLVSVEANGSVEEITQRITKVL 182


>gi|323698824|ref|ZP_08110736.1| ABC transporter related protein [Desulfovibrio sp. ND132]
 gi|323458756|gb|EGB14621.1| ABC transporter related protein [Desulfovibrio desulfuricans ND132]
          Length = 447

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 53/160 (33%), Gaps = 22/160 (13%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG  G+GK+T   +L  FL        +  +P           ++L     +   +   
Sbjct: 264 VEGGNGSGKSTLTRILAGFLAPDAGTATLFDQPVAPARLRGRVGLVLQSPSSQLFEDTVL 323

Query: 69  --IVFAAARLDHVENVIRPALMEGKILLC---DR--FLDSSYAYQGERDSSQHLFLDSLQ 121
             + +AA R    +   R       + +    DR  FL S   Y  +R ++    L    
Sbjct: 324 RELAYAARRKGLDDPEGRARCAAKALGISDLLDRAPFLLS---YGQQRLTALGACLTQ-- 378

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
                   PD  ++LD     GL R + R  +      + 
Sbjct: 379 -------EPDL-LLLD-DPFAGLDR-EARERVHGVLDAER 408


>gi|319899078|ref|YP_004159171.1| adenylate kinase [Bartonella clarridgeiae 73]
 gi|319403042|emb|CBI76597.1| adenylate kinase [Bartonella clarridgeiae 73]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 74/226 (32%), Gaps = 57/226 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   +L                       +  R V++         E E   
Sbjct: 7   GPPGAGKGTQAKILTEE-----------YNIPQLSTGDMLRVVIMK--------ETE--- 44

Query: 71  FAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLFL--DSL 120
                   V  + +  +  G ++        + DR  +S  A     D      +  ++L
Sbjct: 45  --------VGKIAKAVMESGSLVSDNIVNQIVSDRISESDCANGFILDGYPRTVVQAEAL 96

Query: 121 QEI-SVQEVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHE 171
           Q+I   +    D  I L +  D  ++R++ R          +R     D F ++ V   E
Sbjct: 97  QQILKSKNEQLDAVIELVVDEDALIERMKKRVQDTIVSGGQVRSDDNPDAFAKRLVEYRE 156

Query: 172 K---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           K     + +LDI          VD   +F  V+  I N +  + QK
Sbjct: 157 KTAPVSKFYLDI-----GLLKTVDGMANFSDVSRAIKNSLEGVFQK 197


>gi|315930417|gb|EFV09487.1| Polyphosphate kinase [Campylobacter jejuni subsp. jejuni 305]
          Length = 176

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 52  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123


>gi|308061949|gb|ADO03837.1| adenylate kinase [Helicobacter pylori Cuz20]
          Length = 191

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 71/219 (32%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q            
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALNKELSAQ--- 106

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              E+ ++ V         + V +     + R   R     D     +V+ H + R +FL
Sbjct: 107 --NEVVLKSV---------IEVGVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           D +               ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189


>gi|297661749|ref|XP_002809386.1| PREDICTED: guanylate kinase-like isoform 1 [Pongo abelii]
          Length = 218

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 67/223 (30%), Gaps = 41/223 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M+    +   G  GAGK+T +  L +       + V H TR P                G
Sbjct: 22  MSGPRPVVLSGPSGAGKSTLLKRLFQEHSGIFGFSVSHTTRNPR--------------PG 67

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +              R     + I  A   G +     +  S  A Q  +  ++   LD
Sbjct: 68  EENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRICVLD 122

Query: 119 S----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                ++ I   ++ P   I + +      +  +R++ R +  E +           +  
Sbjct: 123 VDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRRRNTETEESLAKRLAAAQADME- 178

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                    +  +P    +V    S       +   + E ++K
Sbjct: 179 ---------SSKEPGLFDVVIVNDSLDQAYAELKEALSEEIKK 212


>gi|265753978|ref|ZP_06089333.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263235692|gb|EEZ21216.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 181

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 41/221 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S++ +     +  VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGSPGTGKTTTASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL+  
Sbjct: 60  QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  ++      I+L    +  +KR   R      + LD   + +V + E   + F ++
Sbjct: 97  RALVREDYEVHY-IVLRASKEETMKRAVER------SKLDR--KTNVELVETMWEQFCNL 147

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220
              + +   +VD+ + S        ++ V E +  R + LS
Sbjct: 148 GIYESN---VVDTTNYSI----QETVSAVQEKIASRAALLS 181


>gi|290961859|ref|YP_003493041.1| guanylate kinase [Streptomyces scabiei 87.22]
 gi|260651385|emb|CBG74507.1| putative guanylate kinase [Streptomyces scabiei 87.22]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 49/212 (23%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSCGVDEF 62
              G  G GK+T ++     +++ + +V +     TR+P            +    +D+ 
Sbjct: 21  VLSGPSGVGKSTVVA----HMRKAHPEVWLSVSATTRKPRPGERNGVHYFFVTDEEMDKL 76

Query: 63  GAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            A  E +    FA  R       +   L +G+ +L +         QG R          
Sbjct: 77  IANGELLEWAEFAGNRYGTPRAAVLERLEKGEPVLLE------IDLQGARQ--------- 121

Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                V+E MPD  ++   P   D  ++R+  R +          E   + +        
Sbjct: 122 -----VRETMPDAQLVFLAPPSWDELVRRLTGRGTEPPEVIERRLEAAKIEL-------- 168

Query: 178 LDIARNQPD-RCHIVDSAHSFQSVATNILNIV 208
                 +P+    +V++  S + VA  +L +V
Sbjct: 169 ----AAEPEFDVTLVNT--SVEDVARELLALV 194


>gi|229583997|ref|YP_002842498.1| ABC transporter related [Sulfolobus islandicus M.16.27]
 gi|238618939|ref|YP_002913764.1| ABC transporter related [Sulfolobus islandicus M.16.4]
 gi|228019046|gb|ACP54453.1| ABC transporter related [Sulfolobus islandicus M.16.27]
 gi|238380008|gb|ACR41096.1| ABC transporter related [Sulfolobus islandicus M.16.4]
          Length = 285

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVL 54
          FI   G  GAGKTT I +L   L++    V V  E P   P       V+
Sbjct: 33 FI---GPNGAGKTTTIKILAGLLRKDGGKVKVFGEDPWDNPKVIEMISVI 79


>gi|227893199|ref|ZP_04011004.1| excinuclease subunit A [Lactobacillus ultunensis DSM 16047]
 gi|227864968|gb|EEJ72389.1| excinuclease subunit A [Lactobacillus ultunensis DSM 16047]
          Length = 967

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI   G+ G+GK+T +++ LKR L +K
Sbjct: 649 GKFIVVTGVSGSGKSTLVNMILKRALAQK 677


>gi|242015714|ref|XP_002428492.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212513126|gb|EEB15754.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 311

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 1  MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M+  +F  I   G  G+GKTT+   +K+ L+  +  V V 
Sbjct: 1  MSKYMFGQIVI-GPPGSGKTTYCYEMKKLLKELDRKVIVV 39


>gi|168027539|ref|XP_001766287.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682501|gb|EDQ68919.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 249

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 60/202 (29%), Gaps = 41/202 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  G+GK T  + +        L     D+       G       ++++    +      
Sbjct: 47  GGPGSGKGTQCAKIVDTFGFVHLSAG--DLLRAEINSGNENGTMIQNMIKEGKIVP---- 100

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                      +    ++  A+ E      D+FL   +     R+       D +     
Sbjct: 101 ----------AEVTVKLLEKAMKESD---NDKFLIDGF----PRNLDNRKCFDEVT---- 139

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182
             + P   +  D P D   +R+  R   R    ++   ++  +  +        + +   
Sbjct: 140 -GIEPQFILFFDCPEDEMERRLLGRNQGRVDDNIETIRKRFKVFIDSSLPVVGHYEEC-- 196

Query: 183 NQPDRCHIVDSAHSFQSVATNI 204
               + H +D+  +   V  +I
Sbjct: 197 ---GKVHKIDATKTPSEVFESI 215


>gi|297584357|ref|YP_003700137.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10]
 gi|297142814|gb|ADH99571.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10]
          Length = 228

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 53/167 (31%), Gaps = 30/167 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGA 64
            I+  G  G GK+T  ++L   L               TPA E    +  L    D+F  
Sbjct: 14  LITLAGTVGVGKSTLTTVLSDALA-------------FTPAFEKVDGNPYLEDYYDDFQK 60

Query: 65  EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAY-QGERDSSQHL 115
            +  +   F A R        +    +    + DR +       +   Y QG        
Sbjct: 61  WSFHLQMYFLAERF----KQQKTMHEQNIGYVQDRSIYEDVGIFAQLQYDQGNMTQRDFN 116

Query: 116 FLDSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
              SL E   ++     PD  I +D   +  + R+Q R    E    
Sbjct: 117 TYHSLFEAMVMNPYFPKPDVLIFIDGRFESIMDRIQKRGREMEVNTP 163


>gi|115315294|ref|YP_764017.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. holarctica OSU18]
 gi|167009994|ref|ZP_02274925.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. holarctica FSC200]
 gi|169656723|ref|YP_001429185.2| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. holarctica FTNF002-00]
 gi|254368195|ref|ZP_04984215.1| signal recognition particle receptor ftsY [Francisella tularensis
           subsp. holarctica 257]
 gi|115130193|gb|ABI83380.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. holarctica OSU18]
 gi|134254005|gb|EBA53099.1| signal recognition particle receptor ftsY [Francisella tularensis
           subsp. holarctica 257]
 gi|164551791|gb|ABU62229.2| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. holarctica FTNF002-00]
          Length = 343

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R             + E  
Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 202

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + N I  A  +G  +++ D
Sbjct: 203 --GADSASVIYNAIGSAKSKGIDVVIAD 228


>gi|110802928|ref|YP_697412.1| deoxynucleoside kinase family protein [Clostridium perfringens
           SM101]
 gi|110683429|gb|ABG86799.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens SM101]
          Length = 203

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74
           K+T +++L          +    EP          + +L     +    +  +   F   
Sbjct: 12  KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 58

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127
           R  H++      L+E    + DR +     +         + ++        L+ +    
Sbjct: 59  RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 113

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186
             P   + L++ VD  +KR+Q R    E       ER+     EK    + +   N    
Sbjct: 114 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 166

Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223
               ++     F+++  +    V  L+ +++S L + K
Sbjct: 167 PILRINVDELDFENIPED-REYVLNLIDEKLSELENNK 203


>gi|115452899|ref|NP_001050050.1| Os03g0337700 [Oryza sativa Japonica Group]
 gi|108708035|gb|ABF95830.1| expressed protein [Oryza sativa Japonica Group]
 gi|113548521|dbj|BAF11964.1| Os03g0337700 [Oryza sativa Japonica Group]
          Length = 265

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
           G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9   GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
                +     ++H+E+ +   L E      D +LD  Y
Sbjct: 69  GPNGGLIYC--MEHLEDNLDDWLDEQ----LDGYLDDDY 101


>gi|89054441|ref|YP_509892.1| ABC transporter related [Jannaschia sp. CCS1]
 gi|88863990|gb|ABD54867.1| sucrose ABC transporter ATP-binding protein / maltose ABC
           transporter ATP-binding protein / trehalose ABC
           transporter ATP-binding protein [Jannaschia sp. CCS1]
          Length = 377

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 6/93 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAARHVLLS 56
            G  I F G  G GK+T + ++    +          DV     P     A   +   L 
Sbjct: 29  QGELIVFVGPSGCGKSTLLRMIAGLEKITGGELVIDNDVVNDVPPSERGIAMVFQSYALY 88

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89
             +      A A+  A      ++  +  A  +
Sbjct: 89  PHMTVRDNMAFALKIAGDDAATIDKKVNAAAAK 121


>gi|306827855|ref|ZP_07461124.1| dephospho-CoA kinase [Streptococcus pyogenes ATCC 10782]
 gi|304429964|gb|EFM33004.1| dephospho-CoA kinase [Streptococcus pyogenes ATCC 10782]
          Length = 203

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52
              + I   G   +GK+T + ++    ++  Y       V    +  G    EA R    
Sbjct: 4   KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 59

Query: 53  --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +L + G  +    +E +      +         +I+  L   +             + 
Sbjct: 60  NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 107

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            +  +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         + 
Sbjct: 108 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 165

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                      L I   +P    ++D+    +++   + + +  L   R
Sbjct: 166 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANSR 203


>gi|297569062|ref|YP_003690406.1| hypothetical protein DaAHT2_1089 [Desulfurivibrio alkaliphilus
          AHT2]
 gi|296924977|gb|ADH85787.1| hypothetical protein DaAHT2_1089 [Desulfurivibrio alkaliphilus
          AHT2]
          Length = 250

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 23/52 (44%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
          G  G GKTT +  L++ L R+   V   R        E  R  LLS  ++ +
Sbjct: 8  GPPGVGKTTVMGALQQALLRQGRAVLSARWVPLVVKQEQQRAGLLSRRLESW 59


>gi|224007723|ref|XP_002292821.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971683|gb|EED90017.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 907

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ + FEG++ +GK++   L++  L++  Y V   R+    P AE      L   +D F
Sbjct: 527 KGVILYFEGLDCSGKSSTGGLVQAALEQAGYAVG-MRQYNRPPTAEQR----LRPWMDRF 581

Query: 63  GAEAEA 68
               EA
Sbjct: 582 DTPGEA 587


>gi|209964748|ref|YP_002297663.1| ABC transporter, ATP-binding protein, putative [Rhodospirillum
          centenum SW]
 gi|209958214|gb|ACI98850.1| ABC transporter, ATP-binding protein, putative [Rhodospirillum
          centenum SW]
          Length = 261

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           G F+S  G  G GK+T + L+   L      VH +  PG     
Sbjct: 34 RGEFVSLLGSSGCGKSTLLRLIAGLLPPTAGGVHWSAPPGPGDIG 78


>gi|208779347|ref|ZP_03246693.1| cytidylate kinase [Francisella novicida FTG]
 gi|208745147|gb|EDZ91445.1| cytidylate kinase [Francisella novicida FTG]
          Length = 221

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 75/242 (30%), Gaps = 57/242 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKN----YDVHVTREPGGT-----PAA 47
           MN+   I+ +G  G GK T    L ++    L               +            
Sbjct: 1   MNNSKIITIDGPSGVGKGTLAKALAKYYDFKLLDSGAIYRLAALHCFKNNANLENEDDVC 60

Query: 48  EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
           +  R++ +S  ++      +A +        +       L                AY  
Sbjct: 61  KTLRNLDISFKIE--DDLVKAFLSNQDVTKDIRTEQIGMLAS-----------KVAAY-- 105

Query: 108 ERDSSQHLFLDSLQEISV-QEVMPD------CTI-------ILDLPVDIGLKRVQNRYSL 153
              + + + L+  +E +  Q ++ D                 LD   +I  KR  N    
Sbjct: 106 --PTVRAILLNKQREFATEQGLVADGRDMGTVVFPQAQYKFFLDASTEITAKRRYNELKT 163

Query: 154 RESACLDYFER-----KDVMIHEKRRQIFLDIARNQP-DRCHIVDSAH-SFQSVATNILN 206
           +       FE+     K     ++ R     +A  +P D   IVD++  S + V  +++ 
Sbjct: 164 KGQKPN--FEKILADIKQRDFQDRNR----KVAPLRPADDAIIVDTSQLSIKEVFDSVIK 217

Query: 207 IV 208
            +
Sbjct: 218 KI 219


>gi|78063148|ref|YP_373056.1| hypothetical protein Bcep18194_B2301 [Burkholderia sp. 383]
 gi|77971033|gb|ABB12412.1| hypothetical protein Bcep18194_B2301 [Burkholderia sp. 383]
          Length = 204

 Score = 38.1 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 62/216 (28%), Gaps = 40/216 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGKTT  +L+   L  +  DV           AE  R              AE   
Sbjct: 16  GPGGAGKTTAGALVAARLNWRFVDVDQCFLATHGNIAEFIRD----------RGYAEYAS 65

Query: 71  FAAARLDHVENVIRP----ALMEGKILLCDRFLDSSY-AYQGERDSSQHLFLDSLQEISV 125
                 + +E  +      A+  G +L    + D     Y   R   +     +L     
Sbjct: 66  HNVGLYEQLERDMSVPTICAVSSGFML----YPDDVAPTYPALRRGIEADGFTAL----- 116

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                    +L       L+R       R+ +   Y    +     K R  F    R   
Sbjct: 117 ---------LL---PSFDLERCAKVIVGRQMSRP-YLNANEADEMRKIRDRFPAFMRLNC 163

Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221
            R    +S    + VA +I   +   +  R+   + 
Sbjct: 164 KRF---ESDGPPEQVAADIERFIVASMPSRIRSRAG 196


>gi|325858425|ref|ZP_08172587.1| dephospho-CoA kinase [Prevotella denticola CRIS 18C-A]
 gi|325483063|gb|EGC86051.1| dephospho-CoA kinase [Prevotella denticola CRIS 18C-A]
          Length = 187

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 21/167 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           + ++  G  G+GK+    LL               ++  T  P      E     +   G
Sbjct: 1   MIVALTGGIGSGKSYVCRLLAERGIAVYDCDAHAKELMRTSPPLRQQLKELVGDSVFRNG 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           + +    AE ++ +   +  V  VI PA      + CD F  S  ++          F  
Sbjct: 61  ILQKSVLAEFLLRSDRHVQAVNAVIHPA------VACD-FEQSGLSWLESAILFDSGFDR 113

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                       D  + +  P ++ ++RV  R  +     L++  R+
Sbjct: 114 RTHI--------DKVVCVTAPAEVRIRRVMERDGISREKALEWMARQ 152


>gi|260461049|ref|ZP_05809298.1| putative fructose transport system kinase [Mesorhizobium
           opportunistum WSM2075]
 gi|259033083|gb|EEW34345.1| putative fructose transport system kinase [Mesorhizobium
           opportunistum WSM2075]
          Length = 203

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 20/169 (11%)

Query: 2   NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            +  FI    G  GAGK+T  + L   L     +V              AR +    G  
Sbjct: 17  KAKRFIVAIAGPPGAGKSTLSASLHDLLPEGAVEVVPMDGFHYDDIVLNARGLRARKGAP 76

Query: 61  EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           E    A  EA++            IR    E  I + DR L+ S A      +     L 
Sbjct: 77  ETFDFAGFEALL----------KRIRAGEAEIAIPVFDRGLELSRAAAAIVGTETKFILV 126

Query: 119 SLQEISVQE-----VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
               + + E     + P  D +I +D+P +   +R+  R+     +  D
Sbjct: 127 EGNYLLLDEEPWSRLAPLFDYSIFVDVPRNELERRLMERWHEHGRSDAD 175


>gi|256060020|ref|ZP_05450202.1| ABC transporter related protein [Brucella neotomae 5K33]
 gi|261323997|ref|ZP_05963194.1| ABC transporter [Brucella neotomae 5K33]
 gi|261299977|gb|EEY03474.1| ABC transporter [Brucella neotomae 5K33]
          Length = 264

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR      A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRNSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|296141267|ref|YP_003648510.1| sulfate adenylyltransferase, large subunit [Tsukamurella
           paurometabola DSM 20162]
 gi|296029401|gb|ADG80171.1| sulfate adenylyltransferase, large subunit [Tsukamurella
           paurometabola DSM 20162]
          Length = 617

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+  +GK+T  + ++R L  +    +                  L       G  A+   
Sbjct: 444 GLSASGKSTVAAEVERILVARGIPAYR-----------------LDGDNLRHGLNADLGF 486

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            AA R ++V  V   A+ +   LL D    +  A      + +     + +E  +     
Sbjct: 487 SAADRAENVRRV--GAVAQ---LLADAGTVAVAALISPYRADREKIRRAHEEAGLPFFE- 540

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P++   +R
Sbjct: 541 ---VYIDTPLEQCERR 553


>gi|227537202|ref|ZP_03967251.1| possible deoxyguanosine kinase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242917|gb|EEI92932.1| possible deoxyguanosine kinase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 204

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 57/171 (33%), Gaps = 35/171 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I+  G  GAGKTT   LL    +               P  EA   +  L     +    
Sbjct: 3   IAIVGNIGAGKTTLTQLLANHFK-------------YEPQFEAVDNNPYLEDFYADMKRW 49

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY--------QGERDSSQ 113
           A  +   F  +R  H+  +      +G  ++ DR  + D   AY         G      
Sbjct: 50  AFNLQIFFLNSRFRHIVQLQ----EKGIDMIQDRTIYED---AYIFAENLFDMGLMSERD 102

Query: 114 HLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF 162
                ++ +  +  +  PD  I L   V   +  +Q R    ESA  LDY 
Sbjct: 103 FENYSNIFQSIIHYIKPPDLLIYLKASVPTLVNNIQRRGRDYESAIRLDYL 153


>gi|169629547|ref|YP_001703196.1| putative sulfate ABC transporter, ATP-binding protein
          [Mycobacterium abscessus ATCC 19977]
 gi|169241514|emb|CAM62542.1| Putative sulfate ABC transporter, ATP-binding protein
          [Mycobacterium abscessus]
          Length = 215

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M +G F++  G  G+GK+T + +L    +     V    + G        +  LL   + 
Sbjct: 1  MATGEFLAILGPSGSGKSTLLRVLAGLEELSAGAVVWASDEGRPRTGVVFQDALLMPWLT 60

Query: 61 EFGAEAEAIVFAAAR 75
               A A  F A R
Sbjct: 61 VAENIAFAKRFGAHR 75


>gi|159484978|ref|XP_001700526.1| adenylate kinase 3 [Chlamydomonas reinhardtii]
 gi|158272166|gb|EDO97970.1| adenylate kinase 3 [Chlamydomonas reinhardtii]
          Length = 264

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 70/233 (30%), Gaps = 60/233 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G   AGK T  + +    +  +  V            +  R  + +       A+     
Sbjct: 41  GAPAAGKGTQCAKIVDKYKLVHISV-----------GDILRDEVKNGTPAGKKAKD---- 85

Query: 71  FAAARL-----DHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               R      + V  +++  L E  +     L D +  S  A Q              +
Sbjct: 86  -FMDRGVLVPDEVVVEMVKLRLAEDDVKQRGWLLDGYPRS--ASQA-------------E 129

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERKDVM 168
            I  + + PD  +++++P ++ ++RV  R    ++  +                 ++   
Sbjct: 130 AIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPPADIVSRLIQRSDD 189

Query: 169 IHEKRR-------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             +K R            +     D    +D   S Q V   I   + E V K
Sbjct: 190 TEDKCRVRVATHNANVDAVVGYYKDVKVDIDGTQSMQDVFEAICTALDETVAK 242


>gi|125718412|ref|YP_001035545.1| dephospho-CoA kinase [Streptococcus sanguinis SK36]
 gi|125498329|gb|ABN44995.1| Dephospho-CoA kinase, putative [Streptococcus sanguinis SK36]
          Length = 198

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 76/224 (33%), Gaps = 50/224 (22%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARH---VLLSC 57
           GI G   +GK+T       FL+++ Y        VH  +EPGG             +L  
Sbjct: 6   GITGGIASGKSTVT----EFLRQQGYQVIDADQVVHELQEPGGRLYQALLSAFGPAILQE 61

Query: 58  GVDEFGAEAEAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
                  +  A++F      A        +IR  L   + LL +     + A        
Sbjct: 62  DGRLDRPKLGAMIFGDPELLAQSSQIQNQIIREELAGRRDLLAE-----TQA--VFFMDL 114

Query: 113 QHLFLDSLQEISVQEVMPDCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
             LF    ++   Q       I L D+ V+  L R+  R +L +           + + E
Sbjct: 115 PLLFELQYEDWFDQ-------IWLVDVTVETQLSRLMTRNTLSQEEAEKRI-AAQLSLQE 166

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
           K        A        ++D+  S +     I + + + +++R
Sbjct: 167 K-----RKRAD------VLIDNNGSLEETRQQIRDAL-QKLERR 198


>gi|73670926|ref|YP_306941.1| ATPase [Methanosarcina barkeri str. Fusaro]
 gi|72398088|gb|AAZ72361.1| ATPase, PilT family [Methanosarcina barkeri str. Fusaro]
          Length = 640

 Score = 38.1 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T  + + R+L      V     P              S     
Sbjct: 269 QRGILIA--GPPGAGKSTFAAGVARYLNDHGQVVKTMESPRDLQVPPEITQY--SPLNGR 324

Query: 62  FGAEAEAIVF 71
               A+ ++ 
Sbjct: 325 MENTADLLLL 334


>gi|329295533|ref|ZP_08252869.1| spermidine/putrescine ABC transporter ATPase subunit [Plautia
          stali symbiont]
          Length = 347

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          ++ G FI+  G  G GKTT ++L+  F +    ++ +  E
Sbjct: 46 IHEGEFITLLGPSGCGKTTLLNLMAGFAEADGGEIFIDGE 85


>gi|302380963|ref|ZP_07269424.1| polyphosphate:nucleotide phosphotransferase, PPK2 family
           [Finegoldia magna ACS-171-V-Col3]
 gi|302311184|gb|EFK93204.1| polyphosphate:nucleotide phosphotransferase, PPK2 family
           [Finegoldia magna ACS-171-V-Col3]
          Length = 287

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 31/202 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ +  + ++ AGK + +  +   L      V   ++P      E   H  L      
Sbjct: 56  KRGILVVLQAMDAAGKDSLVKKVFTALNPAGCKVTSFKQPST----EELDHDYLWRITKA 111

Query: 62  FGAEAEAIVFAAARLD-----HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             A  E  +F  +  +      V N++     +       RF D + A++   D++    
Sbjct: 112 TPAYGEVGIFNRSHYEDVLVTRVHNLVNKKNDDDFW--EKRFEDIN-AFEKYLDNNGIKV 168

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHEK 172
           +                  L +  D   +R+ +R +L E     A  D  ER++   + +
Sbjct: 169 VK---------------FFLHVSKDEQKERLLDRINLEEKHWKFAASDILERENWDDYHR 213

Query: 173 RRQIFLDIARNQPDRCHIVDSA 194
             +  L+         ++V + 
Sbjct: 214 AYEDMLEHTSTDYAPWYVVPAD 235


>gi|257877364|ref|ZP_05657017.1| transcriptional regulator [Enterococcus casseliflavus EC20]
 gi|257811530|gb|EEV40350.1| transcriptional regulator [Enterococcus casseliflavus EC20]
          Length = 338

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 64/169 (37%), Gaps = 22/169 (13%)

Query: 20  HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLD 77
              +L+  L+++ Y + +          +    +L+   VD        E+    A  + 
Sbjct: 79  LAKVLEDLLRKQGYLLILVNSDDKADVEKELMQLLIDRNVDALIIALSTES---YADEVQ 135

Query: 78  HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM------PD 131
             E + + ++    I+L DR +D+    Q   ++    ++ + + I            PD
Sbjct: 136 TKERLKKLSV---PIVLVDRGIDNFEVDQVFYNNRHGGYIAACELIKKGHKKIGTMMNPD 192

Query: 132 CTI--------ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             I         LD   + GL+R  + + + +    D +E+ D+++  +
Sbjct: 193 KNINCVYRYQGYLDALKEFGLQRKDSWHVVTKFQFEDAYEKADILLKNR 241


>gi|294930833|ref|XP_002779698.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239889164|gb|EER11493.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 244

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  G+GK+    +L   L         T+      +    R + L     +     
Sbjct: 24 ITIDGPAGSGKSVVAEMLADSLSG------FTK----LDSGALYRSIALFVNEGDIKGGI 73

Query: 67 EAIVFAAARLDHVENVI 83
          E++ + A R   +E VI
Sbjct: 74 ESLAYEAFRA-LLEQVI 89


>gi|256828736|ref|YP_003157464.1| Cobyrinic acid ac-diamide synthase [Desulfomicrobium baculatum
          DSM 4028]
 gi|256577912|gb|ACU89048.1| Cobyrinic acid ac-diamide synthase [Desulfomicrobium baculatum
          DSM 4028]
          Length = 258

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
          I+F G  G GKTT  + L  +L R+ +DV +          +A
Sbjct: 3  IAFAGKGGVGKTTLCAWLGDYLARQGHDVLLVDADTALSLGQA 45


>gi|289809836|ref|ZP_06540465.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 64

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61


>gi|213854655|ref|ZP_03382895.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 110

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61


>gi|78049001|ref|YP_365176.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037431|emb|CAJ25176.1| ATP sulfurylase [Xanthomonas campestris pv. vesicatoria str. 85-10]
          Length = 658

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 590 --------VFVDVPLAVAEAR 602


>gi|55821057|ref|YP_139499.1| iron compound ABC uptake transporter ATP-binding protein
          [Streptococcus thermophilus LMG 18311]
 gi|55822978|ref|YP_141419.1| ferrichrome ABC transporter ATP-binding protein [Streptococcus
          thermophilus CNRZ1066]
 gi|116627812|ref|YP_820431.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Streptococcus thermophilus LMD-9]
 gi|55737042|gb|AAV60684.1| iron compound ABC uptake transporter ATP-binding protein
          [Streptococcus thermophilus LMG 18311]
 gi|55738963|gb|AAV62604.1| ferrichrome ABC transporter, ATP-binding protein [Streptococcus
          thermophilus CNRZ1066]
 gi|116101089|gb|ABJ66235.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Streptococcus thermophilus LMD-9]
          Length = 251

 Score = 38.1 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV 53
          ++ G F +F G  GAGK+T +SL+ R L + K Y     +E     +   A+ +
Sbjct: 24 IDKGKFTAFIGPNGAGKSTLLSLISRLLPKEKGYLYIKGQEIESWDSLNLAKEL 77


>gi|325921575|ref|ZP_08183421.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate
           kinase RaxQ [Xanthomonas gardneri ATCC 19865]
 gi|325547947|gb|EGD18955.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate
           kinase RaxQ [Xanthomonas gardneri ATCC 19865]
          Length = 658

 Score = 38.1 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 590 --------VFVDVPLAVAEAR 602


>gi|312876966|ref|ZP_07736941.1| guanylate kinase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796281|gb|EFR12635.1| guanylate kinase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 199

 Score = 38.1 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 64/222 (28%), Gaps = 40/222 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  GL I   G  G GK T +  L          +   TR+P            +     
Sbjct: 1   MREGLLIVISGPAGTGKGTVVGRLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E       + +A    ++    ++ +  AL +G  ++ +         QG     +   
Sbjct: 61  EEEIKNERFLEYAEYNNNYYGTPKDFVFEALEKGFDVILE------IETQGALKIKKAFS 114

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                         D  +I  LP   +   +R+  R +  E       E     I     
Sbjct: 115 --------------DAVLIFLLPPSIEELYRRLVKRGTESEDEIRARLEIAKNEI----- 155

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQKR 215
                +         +++   +    A  I  I+  E ++ R
Sbjct: 156 ----KLVSEYD--YCVIN--DNVDDAAEKIQKIIEVEKLKSR 189


>gi|302335770|ref|YP_003800977.1| guanylate kinase [Olsenella uli DSM 7084]
 gi|301319610|gb|ADK68097.1| guanylate kinase [Olsenella uli DSM 7084]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 37/192 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
                 G  GAGK T +++++         V   TR P        + H L      +  
Sbjct: 6   RLFVISGPSGAGKGTLVAVVRNQRPGLGLTVSATTRSPRPGEVDGTSYHFLTESDFADRL 65

Query: 64  AEAEAIVFAAA---RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           A  E + +A+    R   + + +   +  G+ ++                    L +D  
Sbjct: 66  ARGEFLEWASVHGHRYGTLRSEVDERVAAGRSVI--------------------LEIDVQ 105

Query: 121 QEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             ++V+ V PD  +I  +     +   +R++ R +  ES+            HE      
Sbjct: 106 GALNVRRVYPDAVLIF-IEPPSMEALEQRLRARGTEDESSLALRL---SNARHE------ 155

Query: 178 LDIARNQPDRCH 189
           +++A     R  
Sbjct: 156 MELADKYDARVV 167


>gi|167771629|ref|ZP_02443682.1| hypothetical protein ANACOL_03001 [Anaerotruncus colihominis DSM
           17241]
 gi|167666269|gb|EDS10399.1| hypothetical protein ANACOL_03001 [Anaerotruncus colihominis DSM
           17241]
          Length = 309

 Score = 38.1 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 18/154 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L+ +   V +        AA     V       E   ++E   
Sbjct: 107 GVNGVGKTTTIGKLAASLKAQGKQVLLGAADTFRAAAIDQLQVWADRAGVEMVRQSE--- 163

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
             A     V + I      G  +++CD            R  ++   +D L +I   +Q 
Sbjct: 164 -GADPAAVVFDAITAGRARGVDVIICD---------TAGRLHNKKNLMDELSKISRVIQR 213

Query: 128 VMP--DCTIILDLPVDIGLKRVQNRYSLRESACL 159
             P  D  ++L L    G   +      +E+A +
Sbjct: 214 EAPGCDVEVLLVLDATTGQNALNQARQFKEAAGI 247


>gi|27573167|gb|AAO19983.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573175|gb|AAO19987.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.1 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|27573161|gb|AAO19980.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573163|gb|AAO19981.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573169|gb|AAO19984.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573173|gb|AAO19986.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|36939127|gb|AAQ86943.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|36939164|gb|AAQ86950.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|37623912|gb|AAQ95588.1| regulatory protein [Neisseria gonorrhoeae]
 gi|37623914|gb|AAQ95589.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.1 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|317058120|ref|ZP_07922605.1| predicted protein [Fusobacterium sp. 3_1_5R]
 gi|313683796|gb|EFS20631.1| predicted protein [Fusobacterium sp. 3_1_5R]
          Length = 285

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M  G  I F G  G+GK+T ++ L   L  +   V   +
Sbjct: 5  MRPGEVIIFTGNPGSGKSTFVNNLMANLVEQGIKVFTMQ 43


>gi|311068081|ref|YP_003973004.1| adenylyl-sulfate kinase [Bacillus atrophaeus 1942]
 gi|310868598|gb|ADP32073.1| adenylyl-sulfate kinase [Bacillus atrophaeus 1942]
          Length = 197

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V V          +  R        ++ G   E   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQVVVL-------DGDNIR----HGLNNDLGFSDE--- 78

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
               R +++     V +  + +G I++ 
Sbjct: 79  ---DRKENIRRIGEVAKLFVQQGTIVIT 103


>gi|194225867|ref|XP_001917222.1| PREDICTED: similar to adenylate kinase 1 [Equus caballus]
          Length = 217

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 45/216 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEFG 63
           F+   G  G+GK T    + +   +  Y    T         +  R  + S         
Sbjct: 36  FVV--GGPGSGKGTQCEKIVQ---KYGYTHLST--------GDLLRAEVSSGSARGKMLS 82

Query: 64  AEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              E   +V    R+D + + + P +   K  L D          G     +       +
Sbjct: 83  EIMEKGQLVPLVNRVDMLRDAMWPKVDTSKGFLID----------GYPREVKG------E 126

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-- 179
           E   +   P   + +D   +   +R+  R     S  +D  E       +KR + +    
Sbjct: 127 EFEQRIGHPTLLLYVDAGPETMTQRLLKRGQT--SGRVDDNE----ETIKKRLETYYKAT 180

Query: 180 ---IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
              IA  +       V++  S  SV + +   +  L
Sbjct: 181 EPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDAL 216


>gi|168230704|ref|ZP_02655762.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CDC 191]
 gi|194472476|ref|ZP_03078460.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|194458840|gb|EDX47679.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|205334712|gb|EDZ21476.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Kentucky str. CDC 191]
          Length = 578

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|125623347|ref|YP_001031830.1| deoxyguanosine kinase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124492155|emb|CAL97084.1| deoxyguanosine kinase [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070095|gb|ADJ59495.1| deoxyguanosine kinase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 217

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 34/163 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---GAEAEAIV 70
           GAGK++   +L   L+ +                 A    +    V        +  A +
Sbjct: 11  GAGKSSLTEMLAEELETQ-----------------AFYESVHDNKVLPLFYENPQKYAFL 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSLQEIS 124
                L+   + I+ AL +   +L DR  + DS      A  G  D ++    D L +  
Sbjct: 54  LQIYFLNKRFDSIKRALSDNNNVL-DRSIYEDSLLFHLNADLGRADETEVEVYDDLLKNM 112

Query: 125 VQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           ++E+        PD  I + +  D  L+R++ R    E    D
Sbjct: 113 LEEIDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYD 155


>gi|116617510|ref|YP_817881.1| ABC-type multidrug transport system, ATPase and permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096357|gb|ABJ61508.1| ABC-type multidrug transport system, ATPase and permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 593

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I+  G  G+GKTT ++LL RF     YDV    E          R + L    D 
Sbjct: 378 KKGEMIALVGPTGSGKTTVMNLLNRF-----YDVT---EGSVKFDGTDVRKLDLKSLRDH 429

Query: 62  FG-AEAEAIVFAAARLDHVE 80
            G    E+++F+    D+++
Sbjct: 430 VGIVLQESVLFSGTVADNIK 449


>gi|323466592|gb|ADX70279.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 164

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 47/208 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++   I   G  G+GKTT    +++ L     +  +  +       +  R  +L+    
Sbjct: 1   MSN--LIILRGNSGSGKTTLSKRIQKRL---GKNTLLIPQ-------DTVRREMLNAKDG 48

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   ++          N++     +   ++ +  L++ + Y    + ++ LF D +
Sbjct: 49  ANNPSIPLLI----------NLLEYGHEDCDYVILEGILNAKW-YLPVFERAKELFGDRI 97

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                           D+P +  +KR Q R+           E+      EK    F+  
Sbjct: 98  NAY-----------YFDIPFEETMKRHQERHIFSFGE-----EKMRSWWLEKDYIGFI-- 139

Query: 181 ARNQPDRCHIVDSAH--SFQSVATNILN 206
               P++   +D +     + V  +I+ 
Sbjct: 140 ----PEKKFTIDMSLEDELEVVMDDIVK 163


>gi|261367614|ref|ZP_05980497.1| putative ABC transporter related protein [Subdoligranulum variabile
           DSM 15176]
 gi|282570402|gb|EFB75937.1| putative ABC transporter related protein [Subdoligranulum variabile
           DSM 15176]
          Length = 599

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +++G FI   G  G GK+T I ++   L+R +  V +    GG   A  +R VL      
Sbjct: 383 IDAGKFIGVAGPSGCGKSTLIKVI-DKLERADGAVTL----GGASLAALSRRVL--AENV 435

Query: 61  EFGAEAEAIVFAAARLDH 78
               +   ++  A  + H
Sbjct: 436 ALVPQTPFLI--ADTVYH 451


>gi|255583305|ref|XP_002532415.1| adenylsulfate kinase, putative [Ricinus communis]
 gi|223527864|gb|EEF29956.1| adenylsulfate kinase, putative [Ricinus communis]
          Length = 288

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 30/146 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L + L ++                +  R        ++
Sbjct: 109 QKGCVIWITGLSGSGKSTVACALSQMLYQRGK-------LTYILDGDNLR----HGLNND 157

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +AE       R +++  V       GK+     F D+         S      D+ +
Sbjct: 158 LSFKAE------DRAENIRRV----GEVGKL-----FADAGVICIACLISPYRKDRDACR 202

Query: 122 EISVQEVMPDCT-IILDLPVDIGLKR 146
           +I       D   + +D+P+ +   R
Sbjct: 203 KILPNG---DFIEVFMDIPLQVCESR 225


>gi|188997262|ref|YP_001931513.1| cytidylate kinase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932329|gb|ACD66959.1| cytidylate kinase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 214

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 52/238 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFG 63
           + I+ +G  G+GK+T    L + L    Y    T       A +  R ++ L    +   
Sbjct: 1   MIIAIDGPAGSGKSTIAKFLAKEL---GYTYIDTGAMYRAAALKLLRLNINLENEEEIMN 57

Query: 64  AEAEAIVFAAA-----RLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLF 116
                 +           + V ++IR   +     +  R+  +           S Q   
Sbjct: 58  VLENTQILLKDSKVFLDGEDVSDIIRTEEIGNIASIVARYPKVRKWMV------SKQREL 111

Query: 117 LDSLQEISVQE------VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDY------- 161
            +  + + ++       + P  D  I +    +   +R + +    +   +DY       
Sbjct: 112 GEIAKNVVIEGRDAGSRIFPDADLKIFMTASPETRAQR-RVQQLKEKGFMVDYNHILQKI 170

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDR----CHIVDSA-HSFQSVATNILNIVWELVQK 214
            ER  +    K            P R      I+D+   S + V    +N V  L+ K
Sbjct: 171 IERDKLDYERK----------ESPLRPTEDYIIIDTTDKSIEEV----INYVKSLINK 214


>gi|156030585|ref|XP_001584619.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154700779|gb|EDO00518.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 205

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 31/150 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I F G+  +GK+T  + L++ L    +  +                  L      
Sbjct: 22  QRGMTIWFTGLSASGKSTIATALEQHLLHLGHAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118
           FG   +      +R +++  +   A +         F DS + A         +      
Sbjct: 65  FGLNKDLGFDEKSRNENIRRIAEVAKL---------FADSCTIALTSFISPYKADRAVAR 115

Query: 119 SLQEISVQEVM--PDCTIILDLPVDIGLKR 146
            L E +       P   + +D+PV+   KR
Sbjct: 116 ELHEKAANGDEAIPFIEVFIDIPVEEAEKR 145


>gi|145593513|ref|YP_001157810.1| hypothetical protein Strop_0955 [Salinispora tropica CNB-440]
 gi|145302850|gb|ABP53432.1| hypothetical protein Strop_0955 [Salinispora tropica CNB-440]
          Length = 183

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 44/185 (23%), Gaps = 42/185 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---LLSC 57
           M     +   G  GAGKTT    L R +                   E   H     ++ 
Sbjct: 1   MQKPTLVVVSGPPGAGKTTLAHRLARRI---GCPAI-----CRDEIKEGMVHATGEFIAA 52

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             DE         F          V+   L  G          +  A+Q      +   L
Sbjct: 53  PSDELTLRTLPTFF---------QVLELLLNAGVT------TVAEAAFQDRIRRPRLQPL 97

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------DY-FERKDVMI 169
             + EI +            +  +  L R++ R     +          D          
Sbjct: 98  GEIAEICMVHCQ--------VNAETALARIRRRQEENPARRAHADSYLSDREIHAAGHDG 149

Query: 170 HEKRR 174
             + R
Sbjct: 150 FNRVR 154


>gi|86146516|ref|ZP_01064839.1| enterobactin-iron transport system ATP-binding protein [Vibrio
          sp. MED222]
 gi|85835779|gb|EAQ53914.1| enterobactin-iron transport system ATP-binding protein [Vibrio
          sp. MED222]
          Length = 270

 Score = 38.1 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV 53
          G F    G  G GK+T +  L R L+  +       +     PA E AR +
Sbjct: 40 GKFTVIVGPNGCGKSTLLRSLCRLLKPSQGKICLDGQNIQKVPAKELAREL 90


>gi|297519729|ref|ZP_06938115.1| adenylylsulfate kinase [Escherichia coli OP50]
          Length = 111

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|294669442|ref|ZP_06734519.1| signal recognition particle-docking protein FtsY [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291308646|gb|EFE49889.1| signal recognition particle-docking protein FtsY [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 500

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L ++ Q +   V +
Sbjct: 306 GINGAGKTTSIGKLAKYFQSQGKSVIL 332


>gi|282853864|ref|ZP_06263201.1| shikimate kinase [Propionibacterium acnes J139]
 gi|282583317|gb|EFB88697.1| shikimate kinase [Propionibacterium acnes J139]
 gi|314923558|gb|EFS87389.1| shikimate kinase [Propionibacterium acnes HL001PA1]
 gi|314966604|gb|EFT10703.1| shikimate kinase [Propionibacterium acnes HL082PA2]
 gi|315092193|gb|EFT64169.1| shikimate kinase [Propionibacterium acnes HL110PA4]
 gi|315092874|gb|EFT64850.1| shikimate kinase [Propionibacterium acnes HL060PA1]
 gi|315103605|gb|EFT75581.1| shikimate kinase [Propionibacterium acnes HL050PA2]
 gi|327327427|gb|EGE69203.1| shikimate kinase [Propionibacterium acnes HL103PA1]
          Length = 169

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 68/208 (32%), Gaps = 41/208 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GK+T  SLL + L  +  DV    E            + L  G   F    
Sbjct: 2   IALIGAPGSGKSTVGSLLAQRLGEEFVDVDAAIE---QAEGRDIPEIFLIDGEPYFRKVE 58

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                   R + +      A+  G ++             G    +     ++L+ +   
Sbjct: 59  --------RRETLA-----AIERGGVVSL-----------GGGAPADVEVGNALERV--- 91

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                C + LD+       RV  + + R         +   ++ E+ R ++       P 
Sbjct: 92  -----CVVWLDVSARTAADRVGLKDTGRPLLGGQVHSQLVRLMKER-RAVYQR-----PA 140

Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214
              +     S + V   I++ + +L ++
Sbjct: 141 AIRVATDTLSPEQVVDVIVSELADLEEE 168


>gi|227485339|ref|ZP_03915655.1| polyamine-transporting ATPase [Anaerococcus lactolyticus ATCC
          51172]
 gi|227236630|gb|EEI86645.1| polyamine-transporting ATPase [Anaerococcus lactolyticus ATCC
          51172]
          Length = 370

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT ++L+  FL+     V++
Sbjct: 34 KGKFYTLLGPSGCGKTTILNLIAGFLEPSKGSVYI 68


>gi|207109113|ref|ZP_03243275.1| guanylate kinase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 103

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           M++   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MHNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|154303404|ref|XP_001552109.1| hypothetical protein BC1G_09273 [Botryotinia fuckeliana B05.10]
 gi|150854584|gb|EDN29776.1| hypothetical protein BC1G_09273 [Botryotinia fuckeliana B05.10]
          Length = 1906

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 21/93 (22%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            I  EG  G GKTT I+ L R   R                      + LS   D      
Sbjct: 1553 ILIEGSPGVGKTTLIAALARACNR------------------PLTRINLSEQTDLMDLFG 1594

Query: 67   EAIVFAAARLDHVENVIRPAL---MEGKILLCD 96
              +    A   H      P L     G+ +L D
Sbjct: 1595 SDVPVEGAEAGHFAWRDAPFLQAMQRGEWVLLD 1627


>gi|119871568|ref|YP_929575.1| ABC transporter related [Pyrobaculum islandicum DSM 4184]
 gi|119672976|gb|ABL87232.1| ABC transporter related [Pyrobaculum islandicum DSM 4184]
          Length = 199

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          G+ +   G  G+GKTT + +L   L+    +V++   P         R VL
Sbjct: 28 GMAVVV-GPNGSGKTTLLKILAGLLEPDEGEVYIMGMPPAVAIRRMRRAVL 77


>gi|145596304|ref|YP_001160601.1| adenylylsulfate kinase [Salinispora tropica CNB-440]
 gi|145305641|gb|ABP56223.1| adenylylsulfate kinase [Salinispora tropica CNB-440]
          Length = 508

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            GL I   G+ G+GK+T    L   L+ +      
Sbjct: 325 RGLVIFLTGLSGSGKSTIARGLADALREQGERTIT 359


>gi|27573185|gb|AAO19992.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|22299855|ref|NP_683102.1| adenylylsulfate kinase 1 [Thermosynechococcus elongatus BP-1]
 gi|22296040|dbj|BAC09864.1| adenylylsulfate kinase 1 [Thermosynechococcus elongatus BP-1]
          Length = 201

 Score = 38.1 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    ++  L +  Y                 R  +L       G  ++ 
Sbjct: 33  FTGLSGAGKSTLAHAVEERLHQLGY-----------------RTFVLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKIL 93
               + R +++     V +  +  G I+
Sbjct: 76  GFTESDRKENIRRIGEVAKLMMEAGLIV 103


>gi|327184444|gb|AEA32889.1| hypothetical protein LAB52_10123 [Lactobacillus amylovorus GRL
           1118]
          Length = 131

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 36/152 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++   I   G  G+GKTT    +++ +     +  +   P  T      R  +L+    
Sbjct: 1   MSN--LIILRGNSGSGKTTLSKQIQKKI---GKNTLLI--PQDT-----VRREMLNAKDG 48

Query: 61  EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                   ++       +H + VI   ++  K             Y      ++ LF +S
Sbjct: 49  ADNPAISLLMDLLGYGHEHCDYVILEGILNVKW------------YAPVFKKAKELFGNS 96

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151
           +                D+P +  +KR Q R+
Sbjct: 97  MNAY-----------YFDIPFEETVKRHQERH 117


>gi|320085090|emb|CBY94877.1| putative ABC transporter ATP-binding protein MA_1747 [Salmonella
          enterica subsp. enterica serovar Weltevreden str.
          2007-60-3289-1]
          Length = 583

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 45 GPDGAGKTTLMRMLAGLLKADG 66


>gi|292490883|ref|YP_003526322.1| guanylate kinase [Nitrosococcus halophilus Nc4]
 gi|291579478|gb|ADE13935.1| guanylate kinase [Nitrosococcus halophilus Nc4]
          Length = 215

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 54/169 (31%), Gaps = 28/169 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G         GAGKT+ +  L   +      V H TR P      +   +  +    
Sbjct: 1   MMPGSLFVVAAPSGAGKTSLVKALVDSMTGVCLSVSHTTRPPRPGER-DGVDYYFIDDAA 59

Query: 60  DEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
            E   +A A +  A   DH        +   L +G  ++ +        +QG R      
Sbjct: 60  FETMQQAGAFLEHAQVFDHHYGTAREKVAGLLEQGMDVILE------IDWQGRRQ----- 108

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                    VQ   PDC  I  LP   +   +R++ R    E+      
Sbjct: 109 ---------VQARFPDCVSIFILPPSRETLERRLRLRGQDGETVIARRM 148


>gi|258654284|ref|YP_003203440.1| guanylate kinase [Nakamurella multipartita DSM 44233]
 gi|258557509|gb|ACV80451.1| guanylate kinase [Nakamurella multipartita DSM 44233]
          Length = 194

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M+ G      G  G GK+T ++ ++  L    Y V  T
Sbjct: 1  MDRGRLFVLSGPSGVGKSTVLTQVRELLPGLWYSVSAT 38


>gi|257867621|ref|ZP_05647274.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257873951|ref|ZP_05653604.1| ABC transporter [Enterococcus casseliflavus EC10]
 gi|257801704|gb|EEV30607.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257808115|gb|EEV36937.1| ABC transporter [Enterococcus casseliflavus EC10]
          Length = 268

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          MN+G FI+  G  GAGK+T ++ + 
Sbjct: 32 MNAGDFITIIGGNGAGKSTLLNSIA 56


>gi|182677072|ref|YP_001831218.1| sulfate adenylyltransferase, large subunit [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182632955|gb|ACB93729.1| sulfate adenylyltransferase, large subunit [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 652

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L++  L    ++VH                +LL       G   + 
Sbjct: 476 FTGLSGSGKSTIANLVESRLYA--HNVHT---------------ILLDGDNIRHGLNKDL 518

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +     G I +C     S  +            LD  + I  
Sbjct: 519 GFSDVDRVENIRRIGEVAKLMTEAGLIAIC-----SFISPFRAERDLARSLLDEGEFIE- 572

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P++  + R
Sbjct: 573 --------IFVDTPIEDCIAR 585


>gi|168236745|ref|ZP_02661803.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|168820036|ref|ZP_02832036.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Weltevreden str. HI_N05-537]
 gi|194738238|ref|YP_002113908.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|205352075|ref|YP_002225876.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 287/91]
 gi|207856254|ref|YP_002242905.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Enteritidis str. P125109]
 gi|194713740|gb|ACF92961.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. CVM19633]
 gi|197290183|gb|EDY29540.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Schwarzengrund str. SL480]
 gi|205271856|emb|CAR36691.1| hypothetical ABC transporter ATP-binding protein [Salmonella
          enterica subsp. enterica serovar Gallinarum str.
          287/91]
 gi|205343126|gb|EDZ29890.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Weltevreden str. HI_N05-537]
 gi|206708057|emb|CAR32348.1| hypothetical ABC transporter ATP-binding protein [Salmonella
          enterica subsp. enterica serovar Enteritidis str.
          P125109]
 gi|326627117|gb|EGE33460.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Gallinarum str. 9]
          Length = 578

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|198242682|ref|YP_002214780.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|197937198|gb|ACH74531.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Dublin str. CT_02021853]
 gi|326622535|gb|EGE28880.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Dublin str. 3246]
          Length = 578

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|149372627|ref|ZP_01891739.1| adenylylsulfate kinase [unidentified eubacterium SCB49]
 gi|149354670|gb|EDM43234.1| adenylylsulfate kinase [unidentified eubacterium SCB49]
          Length = 198

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L++ L  K    +                  L       G  +  
Sbjct: 30  FTGLSGSGKSTIANALEKALFEKGIHTYS-----------------LDGDNVRLGLNSNL 72

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLC 95
              A  R +++  +   +   +  G +++ 
Sbjct: 73  SFSAEDRTENIRRIAEVSNLMIDAGLVVIA 102


>gi|160897704|ref|YP_001563286.1| ABC transporter-like protein [Delftia acidovorans SPH-1]
 gi|160363288|gb|ABX34901.1| ABC transporter related [Delftia acidovorans SPH-1]
          Length = 217

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 49/170 (28%), Gaps = 46/170 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G EG GKT+ + +L   L  +   +   ++P  +              +      AE  +
Sbjct: 33  GGEGCGKTSLLQMLAGQLPLQGGRLAYPQQPDPSQR----------PALFWRDPRAE--L 80

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAYQGERDSSQHLF----------- 116
             A R        RPA      +   R L    S  A+Q   D                 
Sbjct: 81  SNAERA-------RPA---QDWVQAQRQLYPAWSEAAWQAHADGLGLEPHLHKPLLALST 130

Query: 117 --LDSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161
             L  L      +    +    +++D      L R    +  R  A L+ 
Sbjct: 131 GSLRKLWMAAGWASGVPL----LLID-EPLAALDRGSMDHVQRTMAGLNR 175


>gi|92119184|ref|YP_578913.1| ABC transporter related [Nitrobacter hamburgensis X14]
 gi|91802078|gb|ABE64453.1| ABC transporter related protein [Nitrobacter hamburgensis X14]
          Length = 260

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 26/77 (33%), Gaps = 1/77 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G  ++  G  GAGKTT +  L   L  +   +V     P  T    A R   L  G   
Sbjct: 31  GGCLVALVGPNGAGKTTLLRALAGLLPSEGTIEVCGDALPSLTLRERARRFAYLPQGHQM 90

Query: 62  FGAEAEAIVFAAARLDH 78
                   + A  R  H
Sbjct: 91  HWPLPARDIVALGRYPH 107


>gi|62179384|ref|YP_215801.1| putative ABC-type multidrug transport system, ATPase component
          [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. SC-B67]
 gi|161614944|ref|YP_001588909.1| hypothetical protein SPAB_02698 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|167550506|ref|ZP_02344263.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|224582630|ref|YP_002636428.1| hypothetical protein SPC_0814 [Salmonella enterica subsp.
          enterica serovar Paratyphi C strain RKS4594]
 gi|62127017|gb|AAX64720.1| putative ABC-type multidrug transport system, ATPase component
          [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. SC-B67]
 gi|161364308|gb|ABX68076.1| hypothetical protein SPAB_02698 [Salmonella enterica subsp.
          enterica serovar Paratyphi B str. SPB7]
 gi|205324552|gb|EDZ12391.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA29]
 gi|224467157|gb|ACN44987.1| hypothetical ABC transporter ATP-binding protein [Salmonella
          enterica subsp. enterica serovar Paratyphi C strain
          RKS4594]
 gi|322713855|gb|EFZ05426.1| putative ABC-type multidrug transport system, ATPase component
          [Salmonella enterica subsp. enterica serovar
          Choleraesuis str. A50]
          Length = 578

 Score = 38.1 bits (88), Expect = 1.00,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|329936126|ref|ZP_08285925.1| hypothetical protein SGM_1417 [Streptomyces griseoaurantiacus M045]
 gi|329304444|gb|EGG48323.1| hypothetical protein SGM_1417 [Streptomyces griseoaurantiacus M045]
          Length = 753

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
              GI G GKTT   +L  +L    Y+VH
Sbjct: 190 VIAGIPGVGKTTVALMLAAWLMGNGYEVH 218


>gi|322488082|emb|CBZ23327.1| putative adenylate kinase [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 207

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 16/92 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN---------Q 184
           +  D       +R+ +R +          E++D    E  R  F    +           
Sbjct: 121 LYYDCSEATMEERLLSRGANSG-------EKRDDDAAETIRNRFRVNVQECMPVVEAYKA 173

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
             RCH++D+     +V      +  E+ +K +
Sbjct: 174 NGRCHVIDANRDRDTVYAETRKVFLEMGEKPL 205


>gi|297544623|ref|YP_003676925.1| cytidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296842398|gb|ADH60914.1| cytidylate kinase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 221

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 41/234 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    L + L     D           A +     +    + +     
Sbjct: 5   IAIDGPAGAGKSTVSKKLAKLLNYTYIDTGAMYRAITYKALQKGIKFIEEDKISDIAQST 64

Query: 67  EAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           +  +          D  E + +P + E   L+             +    + + +   +E
Sbjct: 65  DITLEGEKIFLDGKDISEEIRKPEVSEKVSLVS------------KIPKVREILVQKQRE 112

Query: 123 ISVQE------------VMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFER---- 164
           I+  +            V+PD      L   ++   KR + R    ++  + Y+E     
Sbjct: 113 IAKGKNVVMDGRDIGTVVLPDAQFKFFLTASLEERAKR-RYRELKTKNVNVSYYEVVKEI 171

Query: 165 KDVMIHEKRRQIF-LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRV 216
           ++    + +R+   L IA++      ++D+   S + V   + NI+ E ++  +
Sbjct: 172 ENRDTIDSQRETSPLKIAKDS----IVIDTTYLSEEEVVEKLYNIIKEGLKGEI 221


>gi|297526052|ref|YP_003668076.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Staphylothermus hellenicus DSM 12710]
 gi|297254968|gb|ADI31177.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Staphylothermus hellenicus DSM 12710]
          Length = 444

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 16/136 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L  + + + Y V +       PAA       L    ++ G       
Sbjct: 107 GLQGSGKTTTAAKLAYYYKLEGYRVGLVTADTYRPAAYDQ----LKQLGEQIGVPVYGEP 162

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                ++     +   +  G  I++ D            R   +   L  ++EI+ + + 
Sbjct: 163 NNKDAVEIARRGVEYFVSRGFDIVIVD---------TAGRHHREEDLLKEMREIA-ENIK 212

Query: 130 PDCTIILDLPVDIGLK 145
           PD  +++ +   IG +
Sbjct: 213 PDEVVLV-IDAAIGQQ 227


>gi|256084465|ref|XP_002578449.1| xpa-binding protein 1 (mbdin) [Schistosoma mansoni]
 gi|238663823|emb|CAZ34687.1| xpa-binding protein 1 (mbdin), putative [Schistosoma mansoni]
          Length = 376

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 12/102 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAA--RHVL 54
            I   G+ G+GKTT +  L  +L            +  VH           +    + V+
Sbjct: 15  LIVL-GMAGSGKTTFVKKLNEYLTVSSNSSYTINLDPAVHHIPYNPNIDIRDTVKFKEVM 73

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              G    GA   ++ F A++   V ++I     +   ++ D
Sbjct: 74  KQYGYGPNGAIMTSLNFFASQFHKVVDIINNNSGKYSYVIID 115


>gi|224283730|ref|ZP_03647052.1| adenylate kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|313140886|ref|ZP_07803079.1| adenylate kinase [Bifidobacterium bifidum NCIMB 41171]
 gi|313133396|gb|EFR51013.1| adenylate kinase [Bifidobacterium bifidum NCIMB 41171]
          Length = 187

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 41/211 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G +G GK T  +LL             T   G            L     ++  + E + 
Sbjct: 7   GPQGVGKGTQAALLAEHY---GIPAIST---GDIFRYNIKNKTELGLEALKYTDKGELVP 60

Query: 71  FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEISV 125
                 +    +++  L     +   +L D +          R++SQ   LD+ L+E+  
Sbjct: 61  -----DELTNKIVKDRLAMDDAKNGWIL-DGY---------PRNASQVKALDAMLEELGT 105

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181
                D  + LD   D+ ++R+  R    +    D  E        KR   +      + 
Sbjct: 106 PL---DKVVALDADHDVLMQRIAKRAQ-EQGRSDDTPEA-----IAKRLATYAKETAPLL 156

Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWE 210
                R     +D      ++  NI+  + +
Sbjct: 157 DTYKSRGQLVAIDGVGDIGAIQANIVAALSD 187


>gi|194444576|ref|YP_002040052.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
 gi|194403239|gb|ACF63461.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL254]
          Length = 578

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|156043655|ref|XP_001588384.1| hypothetical protein SS1G_10831 [Sclerotinia sclerotiorum 1980]
 gi|154695218|gb|EDN94956.1| hypothetical protein SS1G_10831 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 202

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 37/179 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVD 60
           I   G  G GK T    L   L   + D+      H TR P      +   + +     +
Sbjct: 11  IIISGPSGVGKGT----LYSRLLANHPDLFTTSISHTTRAPRPGEKRDVDYYFVPMEEFE 66

Query: 61  EF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                G   E  +F   R      +I     EGKI++ D                +   +
Sbjct: 67  AMIAKGDFVEHAMFGGNRYGTSRKMIEEKRGEGKIVVLD---------------IEMEGV 111

Query: 118 DSLQEISVQEVMPDCTIIL------DLPV-DIGLKRVQNRYSLRESACLDYFERKDVMI 169
             +  ++     P   I +      D+   ++  KR++ R + +E +      +  + +
Sbjct: 112 KQIHSLN--PPFPARYIFISPPSTADMTAYEVLEKRLRGRGTEKEESIQKRLAQAKLEL 168


>gi|16764180|ref|NP_459795.1| ABC-type multidrug transport system ATPase component [Salmonella
          enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167992049|ref|ZP_02573147.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168240681|ref|ZP_02665613.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|168466407|ref|ZP_02700269.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|194448160|ref|YP_002044845.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|197250693|ref|YP_002145772.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197265989|ref|ZP_03166063.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|200390245|ref|ZP_03216856.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|16419323|gb|AAL19754.1| putative ABC-type multidrug transport system, ATPase component
          [Salmonella enterica subsp. enterica serovar
          Typhimurium str. LT2]
 gi|194406464|gb|ACF66683.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL476]
 gi|195630978|gb|EDX49564.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Newport str. SL317]
 gi|197214396|gb|ACH51793.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Agona str. SL483]
 gi|197244244|gb|EDY26864.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Saintpaul str. SARA23]
 gi|199602690|gb|EDZ01236.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Virchow str. SL491]
 gi|205329595|gb|EDZ16359.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205340304|gb|EDZ27068.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Heidelberg str. SL486]
 gi|261246075|emb|CBG23877.1| hypothetical ABC transporter ATP-binding protein [Salmonella
          enterica subsp. enterica serovar Typhimurium str.
          D23580]
 gi|267992560|gb|ACY87445.1| putative ABC-type multidrug transport system ATPase component
          [Salmonella enterica subsp. enterica serovar
          Typhimurium str. 14028S]
 gi|301157402|emb|CBW16891.1| hypothetical ABC transporter ATP-binding protein [Salmonella
          enterica subsp. enterica serovar Typhimurium str.
          SL1344]
 gi|312911841|dbj|BAJ35815.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhimurium str. T000240]
 gi|321226390|gb|EFX51441.1| putative ATP-binding component of a transport system [Salmonella
          enterica subsp. enterica serovar Typhimurium str.
          TN061786]
 gi|322616293|gb|EFY13202.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315996572]
 gi|322619543|gb|EFY16418.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-1]
 gi|322622761|gb|EFY19606.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-3]
 gi|322628673|gb|EFY25460.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 495297-4]
 gi|322637137|gb|EFY33840.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 515920-2]
 gi|322641663|gb|EFY38299.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 531954]
 gi|322644542|gb|EFY41082.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648475|gb|EFY44927.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. OH_2009072675]
 gi|322654211|gb|EFY50534.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658126|gb|EFY54393.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 19N]
 gi|322663600|gb|EFY59802.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 81038-01]
 gi|322670336|gb|EFY66476.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671572|gb|EFY67694.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 414877]
 gi|322676928|gb|EFY72995.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 366867]
 gi|322682853|gb|EFY78872.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 413180]
 gi|322686532|gb|EFY82514.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 446600]
 gi|323129124|gb|ADX16554.1| putative ABC-type multidrug transport system ATPase component
          [Salmonella enterica subsp. enterica serovar
          Typhimurium str. 4/74]
 gi|323194571|gb|EFZ79764.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609458-1]
 gi|323199098|gb|EFZ84194.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556150-1]
 gi|323202053|gb|EFZ87112.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 609460]
 gi|323208921|gb|EFZ93858.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 507440-20]
 gi|323213906|gb|EFZ98676.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 556152]
 gi|323215242|gb|EFZ99987.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB101509-0077]
 gi|323220839|gb|EGA05277.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB102109-0047]
 gi|323227302|gb|EGA11470.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB110209-0055]
 gi|323229920|gb|EGA14043.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. MB111609-0052]
 gi|323233145|gb|EGA17241.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009083312]
 gi|323240880|gb|EGA24922.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 2009085258]
 gi|323243197|gb|EGA27217.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. 315731156]
 gi|323248736|gb|EGA32664.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2009159199]
 gi|323258768|gb|EGA42425.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008283]
 gi|323260687|gb|EGA44292.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008284]
 gi|323267876|gb|EGA51355.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008285]
 gi|323268738|gb|EGA52198.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008287]
          Length = 578

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|71665420|ref|XP_819680.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70884992|gb|EAN97829.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 4506

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTRE-PGGTPAAEAARHVL 54
            +   G   +GKTT I  L   L   + + D  V  E    T   E  R +L
Sbjct: 1755 VVITGPPFSGKTTQIRRLVEKLNVSQLDLDAMVRAEAEFDTAEGELIRTIL 1805


>gi|323251740|gb|EGA35607.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Montevideo str. IA_2010008282]
          Length = 577

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|297617856|ref|YP_003703015.1| dephospho-CoA kinase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145693|gb|ADI02450.1| dephospho-CoA kinase [Syntrophothermus lipocalidus DSM 12680]
          Length = 209

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 41/229 (17%)

Query: 11  GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G+ G   +GK+T   +LK     +   +       EPG     +  +        ++   
Sbjct: 5   GLTGGIASGKSTVSYILKSLGAVIIDADKVARKVVEPGQPAWQDIVKEFGQQVLNEDMTI 64

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E +                    GK++  D+ L +           ++ F + L  ++
Sbjct: 65  NREVL--------------------GKLVFSDQSLLAKLNRITHPRVIEY-FREELARMA 103

Query: 125 VQEVMPDCTIILDLP--VDIGLKRVQNR---YSLRESACLDY-FERKDV---MIHEKRRQ 175
            +   P+  ++LD+P   + G+ R+ +        E   L+   ER+        ++ R 
Sbjct: 104 REN--PEAVVVLDVPLLFESGMYRLADEIWVVWADEKVQLERLMEREGFTPEEAWQRIRA 161

Query: 176 IF-LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
              L+    + DR  +++++ +            +E +      +  KK
Sbjct: 162 QMPLEEKARRADR--VINNSGTLDETVEQTTRFFYETISAHDDKIKEKK 208


>gi|317050294|ref|YP_004111410.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Desulfurispirillum indicum S5]
 gi|316945378|gb|ADU64854.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Desulfurispirillum indicum S5]
          Length = 177

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          I F G  G+GKTT I  L + L  +   V V +
Sbjct: 11 IGFTGTSGSGKTTLIEKLVQQLSHRGLKVGVIK 43


>gi|284034154|ref|YP_003384085.1| hypothetical protein Kfla_6283 [Kribbella flavida DSM 17836]
 gi|283813447|gb|ADB35286.1| hypothetical protein Kfla_6283 [Kribbella flavida DSM 17836]
          Length = 206

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 30/147 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   GI GAGK+T ++ L                P G+         + +      GA 
Sbjct: 28  LVVLAGIPGAGKSTLLARL---------------FPAGSDVRVLDSAAVRARWKPALGAI 72

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              +      L +   V+R     G +++ D      +  Q    ++ H        ++V
Sbjct: 73  PYPLWRPLMHLAYYVQVLRAMRDGGPLVIHD-CATRPWVRQLIGRAASH------NGLAV 125

Query: 126 QEVMPDCTIILDLPVDIGL--KRVQNR 150
             +M      LD+P D+    +R +NR
Sbjct: 126 HLIM------LDVPEDVARLGQRARNR 146


>gi|317154708|ref|YP_004122756.1| cytidylate kinase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944959|gb|ADU64010.1| cytidylate kinase [Desulfovibrio aespoeensis Aspo-2]
          Length = 220

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+S L ++ +G  G GK+T    L R L
Sbjct: 1  MHSPLIVTIDGPAGVGKSTVAKRLARAL 28


>gi|168263684|ref|ZP_02685657.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
 gi|205347832|gb|EDZ34463.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Hadar str. RI_05P066]
          Length = 578

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|204929805|ref|ZP_03220826.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Javiana str. GA_MM04042433]
 gi|204320799|gb|EDZ06000.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Javiana str. GA_MM04042433]
          Length = 578

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61


>gi|153853288|ref|ZP_01994697.1| hypothetical protein DORLON_00683 [Dorea longicatena DSM 13814]
 gi|149754074|gb|EDM64005.1| hypothetical protein DORLON_00683 [Dorea longicatena DSM 13814]
          Length = 206

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 38/171 (22%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGV 59
            G+ I   G  G+GK T +  LLK++          TR P   P  E  R          
Sbjct: 4   KGILIVVSGFSGSGKGTIMKELLKQYDNYALSISATTRNP--RPGEEDGREYFFKTVEDF 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY----AY---QGERDSS 112
           ++  A+ E I +A                        R++D+ Y    AY   Q E    
Sbjct: 62  EKMIAKEELIEYA------------------------RYVDNYYGTPRAYVEEQLEAGKD 97

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
             L ++    + V+E  PD T++L +      + +++R   R +  +D  E
Sbjct: 98  VILEIEIQGALKVKEKFPD-TLLLFVTPPSAEE-LKSRLVGRGTETMDVIE 146


>gi|27573177|gb|AAO19988.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 296

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 209 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 264

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 265 -TGDSAAVCFDAVQAAKARGIDIVLAD 290


>gi|27573165|gb|AAO19982.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573171|gb|AAO19985.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573179|gb|AAO19989.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573181|gb|AAO19990.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573187|gb|AAO19993.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|27573189|gb|AAO19994.1| regulatory protein PilA [Neisseria gonorrhoeae]
 gi|37623916|gb|AAQ95590.1| regulatory protein [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|52142572|ref|YP_084256.1| hypothetical protein BCZK2669 [Bacillus cereus E33L]
 gi|51976041|gb|AAU17591.1| group-specific protein [Bacillus cereus E33L]
          Length = 282

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|68072181|ref|XP_678004.1| XPA binding protein 1 [Plasmodium berghei strain ANKA]
 gi|56498328|emb|CAI00130.1| XPA binding protein 1, putative [Plasmodium berghei]
          Length = 472

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 13/102 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----------REPGGTPAAEAAR--HVL 54
           I+  G+ G+GKTT+I  L  +L+ +      T          + P      ++ +   V+
Sbjct: 182 IAI-GMAGSGKTTYIGALYNYLKIQRKKKVYTINLDPAVKNLQYPTNIDIRDSIKYHEVM 240

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   GA    +   A R D V  ++     +   ++ D
Sbjct: 241 KEYKLGPNGAIMTCLNLFATRFDKVIELLEKRKHKLNYIIVD 282


>gi|14521615|ref|NP_127091.1| hypothetical protein PAB0938 [Pyrococcus abyssi GE5]
 gi|5458834|emb|CAB50321.1| Hypothetical protein [Pyrococcus abyssi GE5]
          Length = 480

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   + V   R P   P  +  + V+      E   + E  +   
Sbjct: 166 GCGKSQTSRKVAQLLQEMGFKVVAVRHP--MPYGDLRKQVVQRFATFEDLDKHECTIEE- 222

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE---VMP 130
                      P L  G ++       +   Y+     ++      L +    +     P
Sbjct: 223 ------REEYEPYLERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFFEP 270

Query: 131 DCTI 134
           D  I
Sbjct: 271 DLWI 274


>gi|88597132|ref|ZP_01100368.1| polyphosphate kinase 2 [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190821|gb|EAQ94794.1| polyphosphate kinase 2 [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 207

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 54  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 102

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 103 -----------------YFQRYIAHLPSAGEIVIFDRSWY 125


>gi|254238896|ref|ZP_04932219.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa C3719]
 gi|126170827|gb|EAZ56338.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa C3719]
          Length = 633

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 34/151 (22%)

Query: 2   NSGLF------ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
            +G F      I F G+ GAGK+T    ++R L      V+V          +  RH L 
Sbjct: 457 RAGRFGQQPATILFSGLSGAGKSTLAYAVERKLFDMGRAVYVL-------DGQNLRHDLN 509

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +     E  +    R  HV    +     G I LC     +  A   E       
Sbjct: 510 KGLPQDRAGRTENWL----RTAHVA---KQFNEAGLISLC-----AFVAPSAEGREQARA 557

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + + + +         T+ +     +  +R
Sbjct: 558 LIGA-ERL--------ITVYVQASPQVCRER 579


>gi|257451547|ref|ZP_05616846.1| hypothetical protein F3_00687 [Fusobacterium sp. 3_1_5R]
          Length = 292

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M  G  I F G  G+GK+T ++ L   L  +   V   +
Sbjct: 12 MRPGEVIIFTGNPGSGKSTFVNNLMANLVEQGIKVFTMQ 50


>gi|254475355|ref|ZP_05088741.1| conserved hypothetical protein [Ruegeria sp. R11]
 gi|214029598|gb|EEB70433.1| conserved hypothetical protein [Ruegeria sp. R11]
          Length = 216

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVL-LSCGVDE 61
             ++  G  G+GK+T  S L   L        V    G        A R +L      + 
Sbjct: 29  RLVALAGAPGSGKSTLASRLVEALCTAGTQAAVVPMDGFHLDNRLLAERDLLPRKGAPET 88

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F     A + AA   D   +VI P        + DR LD   A  G         +  L+
Sbjct: 89  FDQRGFARLVAALASD--RDVIYP--------IFDRSLD--LAIAGAGAVDGACEVAVLE 136

Query: 122 EISV-------QEVMP--DCTIILDLPVDIGLKRVQNR 150
              +       +++ P  D ++ +D+P  +  +R+  R
Sbjct: 137 GNYLLFDSDGWRDLAPMWDLSVRVDVPRSVLRQRLVER 174


>gi|172038947|ref|YP_001805448.1| adenylate kinase [Cyanothece sp. ATCC 51142]
 gi|171700401|gb|ACB53382.1| adenylate kinase [Cyanothece sp. ATCC 51142]
          Length = 186

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 41/217 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55
           M++G  + F G  G+GK T    L +     N     T         E  R  +     L
Sbjct: 1   MSTGKGLIFLGPPGSGKGTQAQQLSKEF---NIPHIST--------GEMLREAIAQQTPL 49

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                 +  + E +          + + +    EG  +L D F          R+ SQ  
Sbjct: 50  GQKAQTYVDQGELVPDDLLLDLIEDRLNQEDAQEG-WIL-DGF---------PRNVSQAE 98

Query: 116 FLDS-LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172
           FLD  L ++          I LD+P ++ + R+  R    ++       R+  +  EK  
Sbjct: 99  FLDKLLHKLDKFSPQ---AINLDVPDEVIIDRLLLRGRKDDNKETIR--RRLDVYREKTQ 153

Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                +      Q D+   +D     Q V T++  +V
Sbjct: 154 PVLDYY-----RQHDKLSSIDGNRELQEVTTSLKEVV 185


>gi|170017577|ref|YP_001728496.1| deoxynucleoside kinase [Leuconostoc citreum KM20]
 gi|169804434|gb|ACA83052.1| Deoxynucleoside kinase [Leuconostoc citreum KM20]
          Length = 210

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 52/225 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT  SL+       N+      EP G                     +    +   
Sbjct: 10  GVGKTTLTSLIAE-----NFGTKAFYEPVGDNPVLPL---------YYSDPKQYGFLLQI 55

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
             L+   ++I+ AL +   +L DR  + D+ +  +  +D               +  +  
Sbjct: 56  YFLNRRFDMIKQALADDNNVL-DRSIYEDALFTSENHKDGNITDAEMSVYTQLLNNMMSE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++  +   PD  +  +   +  L R++ R    E      F+  D +     RQ +  
Sbjct: 115 LQKLPKKS--PDLLVYAETDFETILYRIKKRGRDYEQ-----FDNNDDL-----RQYYFR 162

Query: 180 IARNQPDRCHIVDSA-----------HSFQSVATNILNIVWELVQ 213
           I     +     D++                  T ILN + + ++
Sbjct: 163 IWSAYREWFDNYDASPKIKVDLQTYDLEIPENQTIILNQINDALK 207


>gi|119467570|ref|XP_001257591.1| signal sequence receptor alpha subunit, putative [Neosartorya
           fischeri NRRL 181]
 gi|119405743|gb|EAW15694.1| signal sequence receptor alpha subunit, putative [Neosartorya
           fischeri NRRL 181]
          Length = 649

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 21/137 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65
           IS  G+ G GK+T++  +  FL + NY V +      T  + A   + +      E  A 
Sbjct: 442 ISIVGVNGVGKSTNLGKICYFLLQNNYRVLIAA--CDTFRSGAVEQLRVHARNLKELSAR 499

Query: 66  A---EAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFL 117
               E  ++         NV + A+  G      ++L D            R  +    +
Sbjct: 500 ENAGEVELYEKGYGKDAANVAKDAVEYGAANQFDVVLID---------TAGRRHNDQRLM 550

Query: 118 DSLQEISVQEVMPDCTI 134
            SL++ +     PD   
Sbjct: 551 SSLEKFAKFA-KPDKIF 566


>gi|120434615|ref|YP_860305.1| HPPK and dNK domain-containing protein [Gramella forsetii KT0803]
 gi|117576765|emb|CAL65234.1| protein containing HPPK and dNK domain [Gramella forsetii KT0803]
          Length = 378

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 20/190 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +I+ EG  GAGKT+  +++      K         P      E            E  A 
Sbjct: 181 YIAVEGNIGAGKTSFSTMVSEDFNAKLILERFKDNPFLPKFYE----------NKERYAF 230

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123
              + F A R   + + +    +    ++ D  +  S  +           L       I
Sbjct: 231 PLEMSFLADRYQQLSDDLAQYDLFKDFVISDYDVFKSLIFAKITLHEDEYSLYHKLFHLI 290

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             + V P+  I L    +  L+ ++ R    E                     +L+  ++
Sbjct: 291 YKELVKPELYIYLYQNTERLLENIKKRGRDYEQNI-------QPEYLMDINNSYLNFIKS 343

Query: 184 QPD-RCHIVD 192
           Q + +  I+D
Sbjct: 344 QSNMKVQIID 353


>gi|315302120|ref|ZP_07873075.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          ivanovii FSL F6-596]
 gi|313629508|gb|EFR97686.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          ivanovii FSL F6-596]
          Length = 364

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|311894806|dbj|BAJ27214.1| putative guanylate kinase [Kitasatospora setae KM-6054]
          Length = 185

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 39/207 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
              G  G GK+T ++ +++        V   TR P          H +     D+  A  
Sbjct: 9   VLSGPSGVGKSTVVAHMRKQFPEVWLSVSATTRHPRPGERDGVQYHFVDHEQFDKLVANG 68

Query: 67  EAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           E +   VFA  R       +   L +G+ +L +         QG R   +          
Sbjct: 69  ELLEWAVFAGNRYGTPRQAVLDKLDKGEPVLLE------IDLQGARQVKES--------- 113

Query: 124 SVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                MP+  ++   P   +  ++R+  R +  +    +      V +           A
Sbjct: 114 -----MPEAQLVFLAPPSWEELVRRLTGRGTESQDVIDERLAAAKVEL----------AA 158

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             + D   +     S + VA  +L ++
Sbjct: 159 EAEFDTTLV---NTSVEQVAAELLALL 182


>gi|296314873|ref|ZP_06864814.1| signal recognition particle-docking protein FtsY [Neisseria
           polysaccharea ATCC 43768]
 gi|296838320|gb|EFH22258.1| signal recognition particle-docking protein FtsY [Neisseria
           polysaccharea ATCC 43768]
          Length = 469

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 276 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 330

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 331 TTGDSAAVCFDAVQAAKARGIDIVLAD 357


>gi|163786404|ref|ZP_02180852.1| Deoxynucleoside kinase subfamily, putative [Flavobacteriales
           bacterium ALC-1]
 gi|159878264|gb|EDP72320.1| Deoxynucleoside kinase subfamily, putative [Flavobacteriales
           bacterium ALC-1]
          Length = 204

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 61/199 (30%), Gaps = 38/199 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL +  +                  +   +  L    ++    +
Sbjct: 3   IAVAGNIGAGKTTLTKLLAKHYK------------WEAQLEDVVDNPYLDDFYNQMERWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114
             +   F  +R   V  +       GK ++ DR  + D+        +      RD   +
Sbjct: 51  FNLQVYFLNSRFRQVNQI----HDSGKDIIQDRTIYEDAHIFAPNLHAMGLMTNRDFENY 106

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             L  L E  V+   PD  I L          + N  S       DY     +    +  
Sbjct: 107 SSLFELMESFVKG--PDLLIYL-------RSSIPNLVSQIHKRGRDYENTISIDYLSRLN 157

Query: 175 QIFLD-IARNQPDRCHIVD 192
           + +   I +       I+D
Sbjct: 158 ERYEAWITKYDKGNLLIID 176


>gi|149182918|ref|ZP_01861376.1| ComGA [Bacillus sp. SG-1]
 gi|148849367|gb|EDL63559.1| ComGA [Bacillus sp. SG-1]
          Length = 358

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 33/112 (29%), Gaps = 25/112 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREP----------------GG 43
           MNS   I F G  G+GKTT +  L          +V    +P                 G
Sbjct: 140 MNSHGLIVFTGPTGSGKTTTLYSLVEHCSSVMQRNVVTLEDPVEKYNDSLVQVQVNEKAG 199

Query: 44  TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
              A   R +L          E         R +    +   A + G ++L 
Sbjct: 200 VTYAAGLRAILRHDPDIIMVGEI--------RDEETAEIAIRAALSGHLVLS 243


>gi|126179950|ref|YP_001047915.1| ATPase [Methanoculleus marisnigri JR1]
 gi|125862744|gb|ABN57933.1| ATPase, PilT family [Methanoculleus marisnigri JR1]
          Length = 631

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGKTT    L  FL   N+ V     P      +       +     
Sbjct: 260 RRGVLIA--GPPGAGKTTLAQSLATFLADNNFVVKTMEAPRDLQVPDHITQY--TALEGS 315

Query: 62  FGAEAEAIVF 71
               AEA++ 
Sbjct: 316 MANTAEALLL 325


>gi|222054537|ref|YP_002536899.1| Adenylyl-sulfate kinase [Geobacter sp. FRC-32]
 gi|254766503|sp|B9M543|CYSC_GEOSF RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|221563826|gb|ACM19798.1| Adenylyl-sulfate kinase [Geobacter sp. FRC-32]
          Length = 203

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    ++  L RK      T               +L       G  ++ 
Sbjct: 33  FTGLSGSGKSTLAHAVEEELFRKG---CYTY--------------ILDGDNIRHGLNSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G I+L 
Sbjct: 76  GFSEADRRENIRRIGEVAKLFVDAGIIVLA 105


>gi|47220344|emb|CAF98443.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 226

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 71/230 (30%), Gaps = 44/230 (19%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  GAGK+T +  L K +     + V H TR P              S G      
Sbjct: 7   VVLSGPSGAGKSTLLKKLMKEYDNVFGFSVSHTTRNPRPGEENGKGTASSSSFGAPSHSE 66

Query: 65  EAEAIVFAAARLD-HVE------------NVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
              A++  +   D H                I  A   G +     +  S  A Q  +  
Sbjct: 67  LESALIVLSGISDYHYVTREAMQAGINNGEFIENAEFSGNM-----YGTSKAAVQAVQAK 121

Query: 112 SQHLFLDS----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFE- 163
           +    LD     ++ I    + P   I + +     ++  KR+++R +  E         
Sbjct: 122 NLICILDIDMQGVKNIKKTNLNP---IYISIQPPSMEVLEKRLRDRKTESEENLQKRLNA 178

Query: 164 -RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            + ++   +K            P    ++    + +     + N + E +
Sbjct: 179 AKNEMEFSKK------------PGIFDVIIVNDNLEDAYDRLKNALLEEI 216


>gi|84496514|ref|ZP_00995368.1| ABC-type multidrug transport system ATPase and permease component
           [Janibacter sp. HTCC2649]
 gi|84383282|gb|EAP99163.1| ABC-type multidrug transport system ATPase and permease component
           [Janibacter sp. HTCC2649]
          Length = 628

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 45/171 (26%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF-------------------LQRKNYDV-HVTREPGG 43
           G  ++  G  GAGK+T  SL+ R                    L+     V  VT+E   
Sbjct: 406 GQLVALVGPSGAGKSTLTSLVARLYDPTSGAVRINGADLRTVSLESLRDTVSVVTQE--A 463

Query: 44  TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSS 102
               +  R  LL        A+ EA + AA   D V+      L  G   ++ DR     
Sbjct: 464 HLFHDTIRTNLLYAAPSATDADIEAALRAARIWDLVDR-----LPSGLDTVVGDR----- 513

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTII------LDLPVDIGLKRV 147
               G R S       ++  + ++       ++      LD   ++ ++R 
Sbjct: 514 ----GHRLSGGEKQRIAIARLLLKGPR--LVVLDEATAHLDSESEVAVQRA 558


>gi|307353992|ref|YP_003895043.1| signal recognition particle-docking protein FtsY [Methanoplanus
           petrolearius DSM 11571]
 gi|307157225|gb|ADN36605.1| signal recognition particle-docking protein FtsY [Methanoplanus
           petrolearius DSM 11571]
          Length = 361

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 15/130 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGKTT I+ +  +L+ K Y V +    G T  A A + +      D  G +  +
Sbjct: 169 FTGVNGAGKTTTIAKVAFYLKSKGYSVVIGS--GDTFRAGANQQM--KTHADRIGVKVIS 224

Query: 69  IVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               A     + + +  A      ++L D            R  ++   +  L++I  + 
Sbjct: 225 HQEGADPSAVLFDTVNYAKAHNIDVVLAD---------TAGRFHNKGNLMKQLEKI-RRV 274

Query: 128 VMPDCTIILD 137
           + PD    +D
Sbjct: 275 MNPDIVAYVD 284


>gi|295087574|emb|CBK69097.1| uridine kinase [Bacteroides xylanisolvens XB1A]
          Length = 234

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 18/162 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 33  LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 91

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
              +++            I   L EGK +    +   +   Q E    +   +  ++ I 
Sbjct: 92  FEWSLL---------SKHIM-MLKEGKSIEQPTYSYLTCTRQSETIHIEPREVVIIEGIL 141

Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 ++ +M D  I +D   D  L RV  R  +      +
Sbjct: 142 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVIERGRTAE 182


>gi|226467728|emb|CAX69740.1| guanylate kinase [Schistosoma japonicum]
          Length = 201

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 11/97 (11%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP-----GGTPAAEAARHVLLSC-GV 59
            F G  GAGK+T + +L         + V H TR+P      G       R   LS    
Sbjct: 8   VFSGPSGAGKSTVLQMLMEKFPNNFGFSVSHTTRKPRPGEKDGIDYHFTDRDTFLSEISE 67

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            +F   AE   FA        + ++  L  G+I + D
Sbjct: 68  GKFLEYAE---FAGNIYGTSRSAVQSVLDAGRICILD 101


>gi|187934749|ref|YP_001887324.1| shikimate kinase [Clostridium botulinum B str. Eklund 17B]
 gi|226729122|sp|B2TQ47|AROK_CLOBB RecName: Full=Shikimate kinase; Short=SK
 gi|187722902|gb|ACD24123.1| shikimate kinase [Clostridium botulinum B str. Eklund 17B]
          Length = 165

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 68/208 (32%), Gaps = 46/208 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M + +F+   G+ G GK+T   ++ + L  K  D+ +  E      ++    +       
Sbjct: 1   MKNKIFLI--GMPGCGKSTIGEIIAKELMLKFIDMDICIE---EKTSKTISELFEQGEDY 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E+E            + +I+       +++            G     + + +++L
Sbjct: 56  FRDIESETC----------KEIIKY----DNVVIAT----------GGGVVKKDINIETL 91

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           +            I +D PV+  +  +            +      + ++++R  I+   
Sbjct: 92  KNNG-------LVIFIDRPVEKIISDIDVSRRPLLKNGKERI----IGLYKERYDIYKKA 140

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
                    +V+ + +   V   I  I+
Sbjct: 141 CHK-----IVVNGS-TIDEVVGEIKKII 162


>gi|196042810|ref|ZP_03110049.1| hypothetical protein BC03BB108_2864 [Bacillus cereus 03BB108]
 gi|196026294|gb|EDX64962.1| hypothetical protein BC03BB108_2864 [Bacillus cereus 03BB108]
          Length = 282

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|254852186|ref|ZP_05241534.1| dephospho-CoA kinase [Listeria monocytogenes FSL R2-503]
 gi|300764771|ref|ZP_07074761.1| dephospho-CoA kinase [Listeria monocytogenes FSL N1-017]
 gi|258605491|gb|EEW18099.1| dephospho-CoA kinase [Listeria monocytogenes FSL R2-503]
 gi|300514447|gb|EFK41504.1| dephospho-CoA kinase [Listeria monocytogenes FSL N1-017]
          Length = 200

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 32/216 (14%)

Query: 11  GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60
           G+ G+   GK+T  +++++    L   +       E G     E        +LL+ G  
Sbjct: 6   GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVERGTEGLKEIVAYFGEEILLADGTL 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E I     + + +  +  P + +  +       ++   +    +      +  L
Sbjct: 66  NRAKLGEIIFKDKEKREKLNEITHPRVKDYML-------EAREHFFEAGEELVFFDIPLL 118

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179
            E  ++ ++ D  +++    +  LKR+  R +L +   L   E + + I EK R+  F  
Sbjct: 119 FESHLESLV-DKIVVVWTTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                     ++D+  S +     +L  +   V+ +
Sbjct: 175 ----------VIDNNESLEKTQKQVLTFIKRFVKNK 200


>gi|153007903|ref|YP_001369118.1| hypothetical protein Oant_0558 [Ochrobactrum anthropi ATCC 49188]
 gi|151559791|gb|ABS13289.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 185

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 18/104 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            FI   G  G+GK+T I      L+R+ +    T E G     +    V +      +  
Sbjct: 7   RFIIISGGPGSGKSTLI----DALERQGFP--RTVEAGRAIIQD---QVAIGGNALPWSD 57

Query: 65  E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
               AE ++    R   +    R        +L DR +     Y
Sbjct: 58  RALFAELMLSWEMRSHTMAEQQR------GTVLFDRGVPDVIGY 95


>gi|27573183|gb|AAO19991.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 311

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 278

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 279 TTGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|83643465|ref|YP_431900.1| signal recognition particle-docking protein FtsY [Hahella
           chejuensis KCTC 2396]
 gi|83631508|gb|ABC27475.1| signal recognition particle-docking protein FtsY [Hahella
           chejuensis KCTC 2396]
          Length = 376

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L    Q++   V +    G T  A A   + +    +     A+   
Sbjct: 181 GVNGVGKTTTIGKLANKFQQEGRSVVLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 236

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +++ D
Sbjct: 237 TGADSASVIFDAVQAAKSRGVDVVIAD 263


>gi|28211258|ref|NP_782202.1| shikimate kinase [Clostridium tetani E88]
 gi|28203698|gb|AAO36139.1| shikimate kinase [Clostridium tetani E88]
          Length = 167

 Score = 38.1 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 33/160 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK+T    L + +Q   YD   T          A +H+    G + F           
Sbjct: 3   GAGKSTFGKELSKIIQ---YDFIDTDYEIEKIERSAIKHIFKEKGENYFRKLE------- 52

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
              D + ++I+    + K++                     +F +++  ++   +    T
Sbjct: 53  --RDLLNDIIKF---DKKVV--------------ATGGGLPIFFNNMDILNKNGI----T 89

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           I LD+P++  LKR +   +       + +++   + + + 
Sbjct: 90  IFLDVPLEELLKRNEKNDNRPLLDKENKYDKLKEIYNSRI 129


>gi|332184110|gb|AEE26364.1| Cytidylate kinase [Francisella cf. novicida 3523]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          MN+   I+ +G  G GK T    L ++
Sbjct: 1  MNNSKIITIDGPSGVGKGTLAKALAKY 27


>gi|325571168|ref|ZP_08146740.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus casseliflavus ATCC 12755]
 gi|325156253|gb|EGC68439.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus casseliflavus ATCC 12755]
          Length = 268

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          MN+G FI+  G  GAGK+T ++ + 
Sbjct: 32 MNAGDFITIIGGNGAGKSTLLNSIA 56


>gi|320333144|ref|YP_004169855.1| Guanylate kinase [Deinococcus maricopensis DSM 21211]
 gi|319754433|gb|ADV66190.1| Guanylate kinase [Deinococcus maricopensis DSM 21211]
          Length = 222

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 43/212 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDV-HVTREPGGTPAAEAARHVLLSCG 58
             GL I   G  G GK T      R+L  ++  Y V   TRE           H +    
Sbjct: 23  KRGLLIVMTGASGVGKGTIRE---RWLADQDIFYSVSWTTREARPGERDGTDYHFVTREA 79

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
            +        +  A    +H    I P   AL  G+ ++                    L
Sbjct: 80  FEAEIDRNGFLEHAEFVGNHYGTPIAPIEAALARGQDVV--------------------L 119

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ L  + ++  +P+  +I  +P    L  ++ R   R +   +  E++      + R+
Sbjct: 120 EIEVLGAMQIKPRIPEAILIFIVPP--SLTELRRRLEGRATETPERIEKR----MTRARE 173

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
              +I         +V+       V   +  +
Sbjct: 174 ---EILEAHNFHYVVVN-----DEVDRAVAEL 197


>gi|302761066|ref|XP_002963955.1| hypothetical protein SELMODRAFT_270406 [Selaginella moellendorffii]
 gi|300167684|gb|EFJ34288.1| hypothetical protein SELMODRAFT_270406 [Selaginella moellendorffii]
          Length = 575

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 72/240 (30%), Gaps = 49/240 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   ++K      +    D+       GT   + A+  +      +   +
Sbjct: 78  ISGAPASGKGTQCEMIKDKYNLVHISAGDLLRAEVAAGTDYGKRAKEFM---DQGKLVPD 134

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              +     RL   +      L++G                  R  SQ   L++L+    
Sbjct: 135 DVVVSMVKQRLQLPDVCEAGWLLDGY----------------PRSLSQAQALEALK---- 174

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFERKDVMI-- 169
             + P   I+L++P D+ ++RV  R                  +        ++      
Sbjct: 175 --IRPQLFILLEVPEDVLIERVVGRRLDPVTGKIYHLKHFPPEDPEVAARLIQRSDDTEK 232

Query: 170 --HEKRRQIFLDIARN---QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
              E+ R    ++A            VD       V  +I + + + ++        K+D
Sbjct: 233 KAMERLRTYHENLASVLSVYESCIKTVDGNRPKSEVFGDISSFLDDRIKAATKVSKPKQD 292


>gi|300772965|ref|ZP_07082834.1| deoxynucleoside kinase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300759136|gb|EFK55963.1| deoxynucleoside kinase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 57/171 (33%), Gaps = 35/171 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I+  G  GAGKTT   LL    +               P  EA   +  L     +    
Sbjct: 3   IAIVGNIGAGKTTLTQLLANHFK-------------YEPQFEAVDNNPYLEDFYADMKRW 49

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY--------QGERDSSQ 113
           A  +   F  +R  H+  +      +G  ++ DR  + D   AY         G      
Sbjct: 50  AFNLQIFFLNSRFRHIVQLQ----EKGIDMIQDRTIYED---AYIFAENLFDMGLMSERD 102

Query: 114 HLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF 162
                ++ +  +  +  PD  I L   V   +  +Q R    ESA  LDY 
Sbjct: 103 FENYSNIFQSIIHYIKPPDLLIYLKASVPTLVNNIQRRGRDYESAIRLDYL 153


>gi|241889822|ref|ZP_04777120.1| ComG operon protein 1 [Gemella haemolysans ATCC 10379]
 gi|241863444|gb|EER67828.1| ComG operon protein 1 [Gemella haemolysans ATCC 10379]
          Length = 331

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
            I F G  G+GK+T +  L   L   N  V    +P
Sbjct: 141 LILFSGPTGSGKSTSLYKLASELANMNKQVITVEDP 176


>gi|308234452|ref|ZP_07665189.1| cytidylate kinase ;1-acyl-sn-glycerol-3-phosphate acyltransferase
          [Atopobium vaginae DSM 15829]
 gi|328944299|ref|ZP_08241763.1| pantoate-beta-alanine ligase/cytidylate kinase [Atopobium vaginae
          DSM 15829]
 gi|327491218|gb|EGF22993.1| pantoate-beta-alanine ligase/cytidylate kinase [Atopobium vaginae
          DSM 15829]
          Length = 513

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 7/39 (17%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
          + I+ +G  G+GK+T    L        +  H+T    G
Sbjct: 1  MIIAIDGPSGSGKSTVAKALA-------HKAHLTYLDTG 32


>gi|215488311|ref|YP_002330742.1| conserved predicted protein with nucleoside triphosphate hydrolase
           domain [Escherichia coli O127:H6 str. E2348/69]
 gi|215266383|emb|CAS10820.1| conserved predicted protein with nucleoside triphosphate hydrolase
           domain [Escherichia coli O127:H6 str. E2348/69]
          Length = 237

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +    +   G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126


>gi|48478588|ref|YP_024294.1| signal recognition particle receptor FtsY [Picrophilus torridus DSM
           9790]
 gi|48431236|gb|AAT44101.1| signal recognition particle receptor FtsY [Picrophilus torridus DSM
           9790]
          Length = 315

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 19/135 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI   GI G GKTT I  +  +L+  N  V +         A     ++      E   
Sbjct: 123 LFI---GINGTGKTTTIGKIASYLKNNNKKVVIAAGDTFRAGAIEQISIIGEKTGTEVIK 179

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 F +       + I  A       +L D       A + + + +    +  ++ +
Sbjct: 180 HD----FGSDPASVAYDAIEHARARRIDYVLID------SAGRMQTNKNLLSEMKKIKRV 229

Query: 124 SVQEVMPDCTII-LD 137
           +     PD T++ LD
Sbjct: 230 A----RPDLTLLVLD 240


>gi|62857597|ref|NP_001016792.1| deoxycytidine kinase, gene 2 [Xenopus (Silurana) tropicalis]
 gi|89273906|emb|CAJ83862.1| Novel protein similar to deoxycytidine kinase [Xenopus (Silurana)
           tropicalis]
          Length = 264

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 40/190 (21%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-----AAEAARHV--------- 53
           S EG   AGK+T + +    L++ N +  V  EP                +         
Sbjct: 26  SVEGNIAAGKSTFVRI----LEKANDEWEVVPEPIAKWCNVQTTGNEDEELSTSQKSGGN 81

Query: 54  LLSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSY 103
           LL    D+    A      A     R         +     P     + +  DR++ +S 
Sbjct: 82  LLQMLYDKPTRWAYTFQTYACLSRVRAQLNPPSHKLREAEHPVQFFERSVYSDRYVFASS 141

Query: 104 AYQGERDSSQHLFLDS------LQEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRE 155
            ++ +  +     +        L +        D    I L    +  + R+  R    E
Sbjct: 142 LFESQNINETEWAIYQDWHTWLLNQFESDI---DLDGIIYLRATPEKCMDRIHTRGRDEE 198

Query: 156 SA-CLDYFER 164
               L+Y E 
Sbjct: 199 QGIELEYLES 208


>gi|15828968|ref|NP_326328.1| ABC transporter ATP-binding protein [Mycoplasma pulmonis UAB
          CTIP]
 gi|14089911|emb|CAC13670.1| ABC TRANSPORTER ATP-BINDING PROTEIN [Mycoplasma pulmonis]
          Length = 511

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G FIS  G  G+GKTT ++ L   +++K  ++ +
Sbjct: 38 KGSFISILGPSGSGKTTLLNSLASLVKKKEGEILI 72


>gi|315655849|ref|ZP_07908747.1| adenylate kinase [Mobiluncus curtisii ATCC 51333]
 gi|315489913|gb|EFU79540.1| adenylate kinase [Mobiluncus curtisii ATCC 51333]
          Length = 193

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 62/219 (28%), Gaps = 49/219 (22%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK TH   +                       +  R             + E
Sbjct: 6   VIMGPPGAGKGTHAKEIATHF-----------NIPWISTGDIFRK--------HKAEKTE 46

Query: 68  AIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDS----------SQH 114
                         +I   + +G+ +   + DR +    +     D            Q 
Sbjct: 47  L-----------GKLIESYIDKGEFVPDSVTDRIVCERISQSDATDGFLLDGYPRSIPQA 95

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK 172
             L ++   +   V  D  I LD+      +R+  R  +  R     +  + +  +  E 
Sbjct: 96  KVLKAVLAEANDRV--DAAIYLDVSAAEVKQRLLKRAEIEGRTDDTPEVIDHRLEVFFEA 153

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             Q  LD    +      VD   +   +A  +L ++ E+
Sbjct: 154 T-QPLLDFYEQE-GVLRKVDGEGTIAEIAQRLLTVMEEI 190


>gi|289434069|ref|YP_003463941.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170313|emb|CBH26853.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|254993304|ref|ZP_05275494.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes FSL J2-064]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|254899022|ref|ZP_05258946.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes J0161]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|46907037|ref|YP_013426.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes str. 4b F2365]
 gi|226223424|ref|YP_002757531.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes Clip81459]
 gi|255521056|ref|ZP_05388293.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes FSL J1-175]
 gi|46880303|gb|AAT03603.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes serotype 4b str. F2365]
 gi|225875886|emb|CAS04590.1| Putative spermidine/putrescine ABC transporter, ATP-binding
          protein [Listeria monocytogenes serotype 4b str. CLIP
          80459]
 gi|328475512|gb|EGF46271.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes 220]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|16799871|ref|NP_470139.1| hypothetical protein lin0797 [Listeria innocua Clip11262]
 gi|16413248|emb|CAC96029.1| lin0797 [Listeria innocua Clip11262]
 gi|313624591|gb|EFR94573.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          innocua FSL J1-023]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|47094812|ref|ZP_00232426.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes str. 1/2a F6854]
 gi|258612108|ref|ZP_05267513.2| spermidine/putrescine ABC transporter [Listeria monocytogenes
          F6900]
 gi|293596479|ref|ZP_05261502.2| spermidine/putrescine import ATP-binding protein [Listeria
          monocytogenes J2818]
 gi|47016694|gb|EAL07613.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes str. 1/2a F6854]
 gi|258608403|gb|EEW21011.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
          F6900]
 gi|293589433|gb|EFF97767.1| spermidine/putrescine import ATP-binding protein [Listeria
          monocytogenes J2818]
          Length = 366

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60


>gi|47093928|ref|ZP_00231666.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes str. 4b H7858]
 gi|258611919|ref|ZP_05243124.2| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          R2-503]
 gi|293596178|ref|ZP_05228927.2| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          J1-194]
 gi|293596824|ref|ZP_05264546.2| spermidine/putrescine ABC transporter [Listeria monocytogenes
          HPB2262]
 gi|300765113|ref|ZP_07075100.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes FSL N1-017]
 gi|146325074|sp|Q722B1|POTA_LISMF RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|47017688|gb|EAL08483.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes str. 4b H7858]
 gi|258607156|gb|EEW19764.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          R2-503]
 gi|293582735|gb|EFF94767.1| spermidine/putrescine ABC transporter [Listeria monocytogenes
          HPB2262]
 gi|293593152|gb|EFG00913.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          J1-194]
 gi|300514238|gb|EFK41298.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes FSL N1-017]
          Length = 366

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60


>gi|330465013|ref|YP_004402756.1| metallophosphoesterase [Verrucosispora maris AB-18-032]
 gi|328807984|gb|AEB42156.1| metallophosphoesterase [Verrucosispora maris AB-18-032]
          Length = 842

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 50/198 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++  G+ G+GK+T                H    P    +++A R ++     D+    
Sbjct: 12  LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDAFRAMVADDENDQSA-- 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 +A   D +  V    L  G++ + D              + Q     +L  ++ 
Sbjct: 56  ------SADAFDALHYVAGKRLRAGRLTVVD------------ATNLQPHARAALVRVAR 97

Query: 126 -QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-RRQIFLDIARN 183
             +V+P   I+LD+P  +   R + R           F ++ +    +  R+ +  +AR 
Sbjct: 98  EHDVLP-VAIVLDVPEALAWARTEARADRT-------FGKQVLARMSRDLRRTYAQLARE 149

Query: 184 QPDRCHI------VDSAH 195
              + H+      +D+A 
Sbjct: 150 GFRKVHVLRGVDEIDAAQ 167


>gi|328467357|gb|EGF38437.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes 1816]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|323498060|ref|ZP_08103066.1| signal recognition particle-docking protein FtsY [Vibrio
           sinaloensis DSM 21326]
 gi|323316868|gb|EGA69873.1| signal recognition particle-docking protein FtsY [Vibrio
           sinaloensis DSM 21326]
          Length = 404

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 207 GVNGVGKTTTIGKLAKQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNGVPVVAQH-- 262

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A  +G  +++ D
Sbjct: 263 TGADSASVIYDAIESAKAKGVDVVIAD 289


>gi|312890949|ref|ZP_07750477.1| guanylate kinase [Mucilaginibacter paludis DSM 18603]
 gi|311296565|gb|EFQ73706.1| guanylate kinase [Mucilaginibacter paludis DSM 18603]
          Length = 189

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 5/101 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G  I F    GAGKTT +  L   +    + +   TR+P G        + + +   
Sbjct: 1   MTQGKLIIFSAPSGAGKTTIVHHLLGHIPDLEFSISATTRKPRGDERDGVDYYFISNEEF 60

Query: 60  DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96
               A+ + +    V+       + + I+    +GK ++ D
Sbjct: 61  LHRIAKKQFVEFEEVYTGTFYGTLRSEIQRIWDKGKHVIFD 101


>gi|292622643|ref|XP_002665053.1| PREDICTED: antigen peptide transporter 1-like [Danio rerio]
          Length = 731

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 22/101 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------- 45
           + +G   +  G  G+GKTT +SLL+RF Q +N ++ + ++P  +                
Sbjct: 503 LKAGKITALVGPSGSGKTTVVSLLERFYQPQNGEILLDQKPLLSYKDQYLHEKISVVSQE 562

Query: 46  ---AAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVI 83
               A + R  +     +    E    ++AAARL +  + I
Sbjct: 563 PVLFARSVRENIKYGKENATNEE----IYAAARLANAHDFI 599


>gi|294625398|ref|ZP_06704031.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600316|gb|EFF44420.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 519

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 354 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 396

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 397 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 450

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 451 --------VFVDVPLAVAEAR 463


>gi|296109685|ref|YP_003616634.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus infernus ME]
 gi|295434499|gb|ADG13670.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus infernus ME]
          Length = 241

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 37/150 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+   GKTT    L + L   + DV V         ++  R          +  
Sbjct: 1   MLIILTGLPAVGKTTFAKNLAKELSNYDVDVIVL-------GSDLIRE-----SFPRWKE 48

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E E  +    R+  +  +I  A+ +   ++ D   D++Y Y   R               
Sbjct: 49  EYEEFI----RVSTL-KLIEMAIKK-YWVIVD---DTNY-YNSMRRDLIK---------- 88

Query: 125 VQEVMPD--CTIILDLPVDIGLKRVQNRYS 152
              + PD    I L  P++  LKR + R  
Sbjct: 89  ---ICPDNYAIIYLKAPIEEILKRNEERGK 115


>gi|295839507|ref|ZP_06826440.1| dephospho-CoA kinase [Streptomyces sp. SPB74]
 gi|197699397|gb|EDY46330.1| dephospho-CoA kinase [Streptomyces sp. SPB74]
          Length = 211

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 70/214 (32%), Gaps = 35/214 (16%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFGA 64
           GI GAGK+    LL      L   +       EPG    A         +L+        
Sbjct: 12  GI-GAGKSEVSRLLVSHGAVLIDSDRIAREVVEPGTDGLAAIVAAFGTEVLAPDGSLDRP 70

Query: 65  EAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              A+VFA   RL  + +++ P +                A          + ++ +  +
Sbjct: 71  RLGALVFADEERLRTLNDIVHPLVRA------------RSAALQAAAPPGAVVVNDVPLL 118

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
               + P  D  +++D      L+R+     + E+        +        R+    +A
Sbjct: 119 VENGLQPLYDLVLVVDASPATQLRRLTGDRGMSEADARARMAAQAG------RE--QRLA 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   ++ +  + + +A  +   VW  +++R
Sbjct: 171 AAD----IVIANDGTREELAARVRE-VWRALERR 199


>gi|169333688|ref|ZP_02860881.1| hypothetical protein ANASTE_00072 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259537|gb|EDS73503.1| hypothetical protein ANASTE_00072 [Anaerofustis stercorihominis DSM
           17244]
          Length = 522

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 7/68 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLL 55
            G FIS  G  GAGK+T +++L + ++              + + P         R  L 
Sbjct: 318 KGDFISVIGPNGAGKSTLLNILGKVIKPYRGKVVSTGKVAVLPQNPVSLFIKNTIRKDLE 377

Query: 56  SCGVDEFG 63
               D   
Sbjct: 378 DISEDYIS 385


>gi|91228753|ref|ZP_01262664.1| putative ATP-binding component of dipeptide transport system
           [Vibrio alginolyticus 12G01]
 gi|91187699|gb|EAS74020.1| putative ATP-binding component of dipeptide transport system
           [Vibrio alginolyticus 12G01]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 32/74 (43%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T I LL    +  + +V+V   P    +A+  + +     +     ++
Sbjct: 53  IAIVGPSGAGKSTLIELLFGLRKPTSGEVYVCGYPLSRSSAKQRQELCQHIQLIPQEPQS 112

Query: 67  EAIVFAAARLDHVE 80
               + A R   +E
Sbjct: 113 SLNPYYAVRQILLE 126


>gi|78355297|ref|YP_386746.1| ATPase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
 gi|78217702|gb|ABB37051.1| ATPase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
          Length = 662

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 17/86 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGTPAAEAAR 51
           I+  G  G GK+T + L+   L++    V                 T  P  T   E  R
Sbjct: 358 IALVGPNGCGKSTLLKLVAGRLEKTGGSVVQGSLVRMGYFSQHQLDTLNPANTVLGEIRR 417

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLD 77
             L      E    +   +F   +  
Sbjct: 418 --LSDPRTTEEELMSVLGLFMLGQAY 441


>gi|15827179|ref|NP_301442.1| shikimate kinase [Mycobacterium leprae TN]
 gi|221229657|ref|YP_002503073.1| shikimate kinase [Mycobacterium leprae Br4923]
 gi|20137461|sp|Q9CCS5|AROK_MYCLE RecName: Full=Shikimate kinase; Short=SK
 gi|13092727|emb|CAC30025.1| putative shikimate kinase [Mycobacterium leprae]
 gi|219932764|emb|CAR70610.1| putative shikimate kinase [Mycobacterium leprae Br4923]
          Length = 199

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 34/163 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L + L      +  T          +   +    G +EF        
Sbjct: 9   GLPGAGKSTIGRRLSKAL---GVSLLDTDAAIEKQTGRSIADIFAIDGEEEF-------- 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R++  E V+R AL+E   ++            G    +      +L          
Sbjct: 58  ---RRIE--EGVVRAALVEHDGVVS----------LGGGAVTSPGVCAALAG-------- 94

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              I L++  +  ++R          A  D  E+   ++  + 
Sbjct: 95  HIVIYLEINAEEAMRRACGSTVRPLLAGPDRAEKFQDLMARRV 137


>gi|307297594|ref|ZP_07577400.1| dephospho-CoA kinase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916854|gb|EFN47236.1| dephospho-CoA kinase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 190

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 76/209 (36%), Gaps = 43/209 (20%)

Query: 14  GAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+GK+T    L +       L +  +D    RE   +      R + L+CG  +    + 
Sbjct: 10  GSGKSTAAERLAKSKMELISLDKLGHDAL--REEQESLVNSFGRGI-LTCGNVDRKKLSR 66

Query: 68  AIVFAAARLDHVENVIRPALMEG--KIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +   +  L  +  ++ P +     +I+     D ++                    + E
Sbjct: 67  IVFENSDLLTKLNKIVHPVIKRKALEIVGKDFSDHYIFDG---------------ALIHE 111

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I + E   D  I  + P +I ++R+  R   +  A       + ++  ++    +LD  +
Sbjct: 112 IGLAEYC-DKIIWFECPNEIAIERLMKRGMSKSRA-------ESILASQQ----YLDSIK 159

Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              D   +V +  S +     + +I++E 
Sbjct: 160 ESVD--AVVTTLGSSEETFEKLRSILFEW 186


>gi|294786899|ref|ZP_06752153.1| putative ABC transporter, ATP-binding protein [Parascardovia
           denticolens F0305]
 gi|294485732|gb|EFG33366.1| putative ABC transporter, ATP-binding protein [Parascardovia
           denticolens F0305]
          Length = 614

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
             G FI+F G  GAGKTT +  L   ++ +    +  + +  G P ++      LS    
Sbjct: 374 KKGEFIAFVGRNGAGKTTLLKCLSGAVKPQAGSMIFKSGQSRGKPISQTIDLSQLSPK-- 431

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK 91
               ++E + F     +H E  +R  L  G+
Sbjct: 432 ---KKSEIMSFMVQDYNHFEFTVRENLSLGR 459


>gi|293363600|ref|ZP_06610356.1| cytidylate kinase [Mycoplasma alligatoris A21JP2]
 gi|292552949|gb|EFF41703.1| cytidylate kinase [Mycoplasma alligatoris A21JP2]
          Length = 227

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 63/238 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    + + L+      +     G    A A   ++    +D   +  
Sbjct: 6   IAIDGPAGAGKSTVSKEIAKRLE------YTFINSGSMYRAIAYNAIMHDVDLDNENSVT 59

Query: 67  EAI-------------------VFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQ 106
           E +                   V  A R +H+ +         K+    R F+ S    Q
Sbjct: 60  ETLKSVEIELKLDESVWINGRDVSNAIRAEHISHGSSTIAKYQKV----REFVVSYI--Q 113

Query: 107 GERDSSQHLFLDSLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
               +++   +D     +  ++MP     I L        +R + R            + 
Sbjct: 114 NMTKANKGFIIDG--RDTTFKLMPHAEVKIFLWAD---AQERAKRRQ----------LQN 158

Query: 165 KDVMIHEKRRQIFLDIA---RNQPDRCH----------IVDSAH-SFQSVATNILNIV 208
           + +       ++ LD+        +R            ++D  + SF+ V   I+ IV
Sbjct: 159 ETMGFKTSYDEVLLDVKLRDEQDMNRKVDPLHKTEDATLIDCTNMSFEEVVLEIIRIV 216


>gi|284989439|ref|YP_003407993.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160]
 gi|284062684|gb|ADB73622.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160]
          Length = 1208

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVT 38
            +  EG  GAGKTT ++  ++ L+      V VT
Sbjct: 456 LVVVEGAAGAGKTTALAATRQLLEADGRHLVVVT 489


>gi|258515330|ref|YP_003191552.1| cytidylate kinase [Desulfotomaculum acetoxidans DSM 771]
 gi|257779035|gb|ACV62929.1| cytidylate kinase [Desulfotomaculum acetoxidans DSM 771]
          Length = 229

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   + I+ +G  GAGK+T   LL   L
Sbjct: 1  MIDNMSIAIDGPAGAGKSTVARLLAEKL 28


>gi|294952788|ref|XP_002787459.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983]
 gi|239902442|gb|EER19255.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983]
          Length = 244

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  G+GK+    +L   L         T+      +    R + L     +     
Sbjct: 24 ITIDGPAGSGKSVVAEMLADSLSG------FTK----LDSGALYRSIALFVNEGDIKGGI 73

Query: 67 EAIVFAAARLDHVENVI 83
          E++ + A R   +E VI
Sbjct: 74 ESLAYEAFRA-LLEQVI 89


>gi|229493465|ref|ZP_04387250.1| guanylate kinase [Rhodococcus erythropolis SK121]
 gi|229319426|gb|EEN85262.1| guanylate kinase [Rhodococcus erythropolis SK121]
          Length = 199

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 66/219 (30%), Gaps = 44/219 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  +   G    GK++ +  L+  L    + V   TR+P                   
Sbjct: 15  RRGRLVVLAGPSAVGKSSVVRELRTRLPELVFSVSATTRDPRPGEVDGKDYRFTSREEFQ 74

Query: 61  EFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                 E + +A       R       +  AL  GK +L                    +
Sbjct: 75  RMIDSGELLEWAEIHGGLQRSGTPAAPVEEALEAGKPVL--------------------V 114

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            +D     +V++ MP+  ++   P   D+ ++R+  R +  E       E        + 
Sbjct: 115 EVDLAGARAVRKAMPEALLVFMAPPSWDVLVQRLTGRGTETEDVVARRLETA------RV 168

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                ++A        IV+     + V+     +V  LV
Sbjct: 169 -----ELAAQDEFDTVIVN-----EDVSRACDELVSLLV 197


>gi|218698016|ref|YP_002405683.1| D-gluconate kinase [Escherichia coli 55989]
 gi|218354748|emb|CAV01817.1| D-gluconate kinase, thermosensitive [Escherichia coli 55989]
          Length = 187

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQEDEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174


>gi|315230945|ref|YP_004071381.1| ABC-type multidrug transport system ATPase [Thermococcus barophilus
           MP]
 gi|315183973|gb|ADT84158.1| ABC-type multidrug transport system ATPase [Thermococcus barophilus
           MP]
          Length = 330

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 61/205 (29%), Gaps = 22/205 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVL 54
             G   +F G  GAGKTT I +L   L+          +DV    +          +   
Sbjct: 28  KKGEIFAFLGPNGAGKTTTIHMLVTLLKPTSGNATVAGHDVIKEPDKVRKKIGIVFQDPS 87

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           L   +  +              D ++  I   L   K +  D F D    +       + 
Sbjct: 88  LDRELTAYENMYIHGKIYGLSGDKLKKRIMEML---KFVELDEFKDRQVKFFSGGMQRRL 144

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
               +L    + E      + LD    IGL   Q R  + E       E +  +      
Sbjct: 145 EIARAL----IHEPE---VLFLD-EPTIGLD-PQTRAHIWEYIKKMKEEHEMTIFLT--- 192

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQS 199
             ++D A    DR  I+D       
Sbjct: 193 THYMDEAEQLADRIAIIDHGRIIAE 217


>gi|146321343|ref|YP_001201054.1| ABC-type uncharacterized transport system, ATPase component
           [Streptococcus suis 98HAH33]
 gi|253752186|ref|YP_003025327.1| ABC transporter ATP-binding protein [Streptococcus suis SC84]
 gi|253754012|ref|YP_003027153.1| ABC transporter ATP-binding protein [Streptococcus suis P1/7]
 gi|253755946|ref|YP_003029086.1| ABC transporter ATP-binding protein [Streptococcus suis BM407]
 gi|145692149|gb|ABP92654.1| ABC-type uncharacterized transport system, ATPase component
           [Streptococcus suis 98HAH33]
 gi|251816475|emb|CAZ52111.1| ABC transporter ATP-binding protein [Streptococcus suis SC84]
 gi|251818410|emb|CAZ56239.1| ABC transporter ATP-binding protein [Streptococcus suis BM407]
 gi|251820258|emb|CAR46714.1| ABC transporter ATP-binding protein [Streptococcus suis P1/7]
 gi|292558774|gb|ADE31775.1| ABC transporter, ATP-binding protein [Streptococcus suis GZ1]
 gi|319758573|gb|ADV70515.1| ABC-type uncharacterized transport system, ATPase component
           [Streptococcus suis JS14]
          Length = 252

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA----ARHVLLSCG 58
            G FI+  G  GAGK+T  +++   L   +  VH+  E      AE        V     
Sbjct: 34  QGDFITILGGNGAGKSTLFNVIAGTLPLTSGSVHILGEDVTNWPAEKRAKYLSRVFQDPK 93

Query: 59  VDEFGAEA--EAIVFAAARLD 77
           +         E ++ A  R +
Sbjct: 94  MGTAPRMTVAENLLIAKYRGE 114


>gi|145535542|ref|XP_001453504.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421226|emb|CAK86107.1| unnamed protein product [Paramecium tetraurelia]
          Length = 453

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 23/158 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G  +   G  G+G++T    L     R  +    TRE             L+S  V++
Sbjct: 245 RAGRILVI-GPPGSGRSTLAKHLCA---RYGFVYISTRE-------------LISNLVNQ 287

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   +       + D V++ I  AL++ +I   D        Y  +        L++L 
Sbjct: 288 KGTTGKEAFEKINKGDLVDDRIINALIKERINQTD---CQLQGYVLDGYPKTQQQLETLN 344

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           E++   + P   +I+D   DI L+R+  R +   S  +
Sbjct: 345 ELN---IQPTLIVIIDATDDIVLRRLTQRRTDPISGRI 379


>gi|33862146|ref|NP_893707.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
 gi|81575560|sp|Q7UZR6|PANCY_PROMP RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|33634364|emb|CAE20049.1| putative bifunctional enzyme; pantothenate synthetase/cytidylate
           kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 510

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
           M     I+ +G  G+GK+T   L+ + L 
Sbjct: 279 MKRKPIIAIDGPAGSGKSTITKLIAKELN 307


>gi|327310145|ref|YP_004337042.1| AAA ATPase [Thermoproteus uzoniensis 768-20]
 gi|326946624|gb|AEA11730.1| AAA ATPase [Thermoproteus uzoniensis 768-20]
          Length = 299

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 18/64 (28%), Gaps = 3/64 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G   +GKTT    +     R    V V    G            L   +     + 
Sbjct: 42  ITIIGPTRSGKTTLAKKIA---SRSGKKVVVMDWNGEYSLGLKINASKLKLDISNINKKI 98

Query: 67  EAIV 70
            A +
Sbjct: 99  LAEL 102


>gi|228927991|ref|ZP_04091036.1| hypothetical protein bthur0010_26940 [Bacillus thuringiensis
          serovar pondicheriensis BGSC 4BA1]
 gi|228831681|gb|EEM77273.1| hypothetical protein bthur0010_26940 [Bacillus thuringiensis
          serovar pondicheriensis BGSC 4BA1]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|228946551|ref|ZP_04108866.1| hypothetical protein bthur0007_26950 [Bacillus thuringiensis
          serovar monterrey BGSC 4AJ1]
 gi|228813164|gb|EEM59470.1| hypothetical protein bthur0007_26950 [Bacillus thuringiensis
          serovar monterrey BGSC 4AJ1]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|297560716|ref|YP_003679690.1| daunorubicin resistance ABC transporter ATPase [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296845164|gb|ADH67184.1| daunorubicin resistance ABC transporter ATPase subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 334

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 71/221 (32%), Gaps = 33/221 (14%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDEFGA 64
           G  GAGKTT +  L   L   +   V    +    PA    R  L      +   +    
Sbjct: 38  GPNGAGKTTLVHCLSTLLVPDRGTAVVDGHDVRTDPAG--VRSSLALTGQFAAVDEVLTG 95

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A  ++FA                     L DRF  S  A       S  +      +++
Sbjct: 96  RANLMLFARLLRLPRARARARVGE-----LLDRFGLSDAADASVGSYSGGMRRRL--DLA 148

Query: 125 VQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
              +   P   ++LD     GL   + R  L  +      ER+D          +L+ A 
Sbjct: 149 ASLIVERP--VLVLD-EPTTGLD-PRTRGDLWNAVR----ERRDAGTTVLLTTQYLEEAD 200

Query: 183 NQPDRCHIVD-----SAHSFQSVATNILNIVWELVQKRVSP 218
              DR  +VD     +  S + +   +   V E+   RV P
Sbjct: 201 RLADRVVVVDRGGLVAEGSPEQLKARVGGSVCEV---RVPP 238


>gi|261855328|ref|YP_003262611.1| flagellar biosynthetic protein FlhF [Halothiobacillus neapolitanus
           c2]
 gi|261835797|gb|ACX95564.1| flagellar biosynthetic protein FlhF [Halothiobacillus neapolitanus
           c2]
          Length = 485

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 16/100 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M  G+F +F G  G GKTT ++ +  + +     D                         
Sbjct: 266 MQGGMF-AFIGPTGVGKTTTLAKIAAQAVLAHGRDSVALITTDRFRIG----------AQ 314

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCD 96
           ++    A  +   +  A    H+  ++ PA+   +++L D
Sbjct: 315 EQLRNYARILNIPLHVARDEQHLAELL-PAVSSKRLVLID 353


>gi|220931882|ref|YP_002508790.1| cytidylate kinase [Halothermothrix orenii H 168]
 gi|219993192|gb|ACL69795.1| cytidylate kinase [Halothermothrix orenii H 168]
          Length = 228

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          I+ +G  GAGK+T   LL R L+ +  D
Sbjct: 5  IAIDGPAGAGKSTLARLLARKLKYRYLD 32


>gi|219855014|ref|YP_002472136.1| hypothetical protein CKR_1671 [Clostridium kluyveri NBRC 12016]
 gi|219568738|dbj|BAH06722.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 211

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 29/145 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G+ I F G+ G+GK+T  S L+  L       +                 LL      
Sbjct: 38  QNGILIWFTGLSGSGKSTIASELEMRLYNMGRLTY-----------------LLDGDNVR 80

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  +        R++++              +C  F+DS         S      D ++
Sbjct: 81  HGLNSNLGFTKEDRIENIRRTAE---------VCKLFVDSGIITISTFISPFKDDRDKVR 131

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
           ++  ++ +    + +D P+++   R
Sbjct: 132 KLLGKDFVE---VYVDCPLEVCESR 153


>gi|217965104|ref|YP_002350782.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          monocytogenes HCC23]
 gi|290893769|ref|ZP_06556749.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          J2-071]
 gi|217334374|gb|ACK40168.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          monocytogenes HCC23]
 gi|290556718|gb|EFD90252.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          J2-071]
 gi|307570336|emb|CAR83515.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Listeria monocytogenes L99]
          Length = 366

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60


>gi|156355406|ref|XP_001623659.1| predicted protein [Nematostella vectensis]
 gi|156210380|gb|EDO31559.1| predicted protein [Nematostella vectensis]
          Length = 389

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 2/99 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G    GKTT  + +  F +   + V    E          +   L    ++     
Sbjct: 17  VVLTGGPCGGKTTTQARMSTFFENIGWKVFRVPETATILLGGGVKFAELDG--EQVNIFQ 74

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           E ++    +L+     +     +  +++CDR      AY
Sbjct: 75  ENLLKTMMQLEKTYFDLAERCHKNCLVICDRGTMDPSAY 113


>gi|158313772|ref|YP_001506280.1| adenylate kinase [Frankia sp. EAN1pec]
 gi|158109177|gb|ABW11374.1| adenylate kinase [Frankia sp. EAN1pec]
          Length = 199

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 59/215 (27%), Gaps = 40/215 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64
              G  GAGK T  + +     R       T +      +      R         E   
Sbjct: 4   VLLGPPGAGKGTQAARISA---RHGVPAISTGQLFDQQISAGSPLGRRAEHYVRAGELVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   +   A RL    +     L++G                  R   Q   LD +   +
Sbjct: 61  DEIVLDMVAERLATGIDCEVGFLLDGF----------------PRTLPQAEALDRM-LTA 103

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
               +    + LD+     L R+  R SL E    D     +     +R ++F +     
Sbjct: 104 TCGPL-HLVLDLDVDETEVLARI-GRRSLSEGRLDD-----NQETARRRLKVFAE--ETA 154

Query: 185 PDR--------CHIVDSAHSFQSVATNILNIVWEL 211
           P R           VD       VA  I  I+   
Sbjct: 155 PLRSHYAEQGLLRTVDGTGMPDEVAARIEEILAAA 189


>gi|30262908|ref|NP_845285.1| hypothetical protein BA_2949 [Bacillus anthracis str. Ames]
 gi|47528241|ref|YP_019590.1| hypothetical protein GBAA_2949 [Bacillus anthracis str. 'Ames
          Ancestor']
 gi|49185745|ref|YP_028997.1| hypothetical protein BAS2739 [Bacillus anthracis str. Sterne]
 gi|65320222|ref|ZP_00393181.1| COG0125: Thymidylate kinase [Bacillus anthracis str. A2012]
 gi|165868918|ref|ZP_02213578.1| hypothetical protein BAC_2977 [Bacillus anthracis str. A0488]
 gi|167631948|ref|ZP_02390275.1| hypothetical protein BAH_3018 [Bacillus anthracis str. A0442]
 gi|167637675|ref|ZP_02395954.1| hypothetical protein BAQ_3001 [Bacillus anthracis str. A0193]
 gi|170685267|ref|ZP_02876491.1| hypothetical protein BAM_3013 [Bacillus anthracis str. A0465]
 gi|170704792|ref|ZP_02895258.1| hypothetical protein BAK_3050 [Bacillus anthracis str. A0389]
 gi|177649644|ref|ZP_02932646.1| hypothetical protein BAO_2958 [Bacillus anthracis str. A0174]
 gi|190565099|ref|ZP_03018020.1| hypothetical protein BATI_2848 [Bacillus anthracis
          Tsiankovskii-I]
 gi|196032301|ref|ZP_03099715.1| hypothetical protein BCW_2852 [Bacillus cereus W]
 gi|227814247|ref|YP_002814256.1| hypothetical protein BAMEG_1655 [Bacillus anthracis str. CDC 684]
 gi|229122487|ref|ZP_04251700.1| hypothetical protein bcere0016_27820 [Bacillus cereus 95/8201]
 gi|229604246|ref|YP_002867198.1| hypothetical protein BAA_3002 [Bacillus anthracis str. A0248]
 gi|254685505|ref|ZP_05149365.1| hypothetical protein BantC_16840 [Bacillus anthracis str.
          CNEVA-9066]
 gi|254722912|ref|ZP_05184700.1| hypothetical protein BantA1_10624 [Bacillus anthracis str. A1055]
 gi|254737961|ref|ZP_05195664.1| hypothetical protein BantWNA_22619 [Bacillus anthracis str.
          Western North America USA6153]
 gi|254742865|ref|ZP_05200550.1| hypothetical protein BantKB_17942 [Bacillus anthracis str. Kruger
          B]
 gi|254752278|ref|ZP_05204314.1| hypothetical protein BantV_07411 [Bacillus anthracis str. Vollum]
 gi|254760793|ref|ZP_05212817.1| hypothetical protein BantA9_20996 [Bacillus anthracis str.
          Australia 94]
 gi|30257541|gb|AAP26771.1| hypothetical protein BA_2949 [Bacillus anthracis str. Ames]
 gi|47503389|gb|AAT32065.1| hypothetical protein GBAA_2949 [Bacillus anthracis str. 'Ames
          Ancestor']
 gi|49179672|gb|AAT55048.1| hypothetical protein BAS2739 [Bacillus anthracis str. Sterne]
 gi|164715644|gb|EDR21161.1| hypothetical protein BAC_2977 [Bacillus anthracis str. A0488]
 gi|167514224|gb|EDR89591.1| hypothetical protein BAQ_3001 [Bacillus anthracis str. A0193]
 gi|167532246|gb|EDR94882.1| hypothetical protein BAH_3018 [Bacillus anthracis str. A0442]
 gi|170130593|gb|EDS99454.1| hypothetical protein BAK_3050 [Bacillus anthracis str. A0389]
 gi|170670627|gb|EDT21366.1| hypothetical protein BAM_3013 [Bacillus anthracis str. A0465]
 gi|172084718|gb|EDT69776.1| hypothetical protein BAO_2958 [Bacillus anthracis str. A0174]
 gi|190564416|gb|EDV18380.1| hypothetical protein BATI_2848 [Bacillus anthracis
          Tsiankovskii-I]
 gi|195995052|gb|EDX59006.1| hypothetical protein BCW_2852 [Bacillus cereus W]
 gi|227003213|gb|ACP12956.1| hypothetical protein BAMEG_1655 [Bacillus anthracis str. CDC 684]
 gi|228661048|gb|EEL16675.1| hypothetical protein bcere0016_27820 [Bacillus cereus 95/8201]
 gi|229268654|gb|ACQ50291.1| hypothetical protein BAA_3002 [Bacillus anthracis str. A0248]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|331090178|ref|ZP_08339066.1| hypothetical protein HMPREF1025_02649 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330402124|gb|EGG81696.1| hypothetical protein HMPREF1025_02649 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 184

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 39/210 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M SG  I   G  G GKTT  +++ +        VH+  +      ++ A    L    +
Sbjct: 1   MKSGRIIVITGAPGTGKTTTSAIVAKE-STMEKSVHMHTDDFYHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-S 119
           +     EA + AA R           +  G  ++ D                   FL+  
Sbjct: 60  QNLIVIEAFLEAAKR----------YVRGGYDVIVD-------------GIIGPWFLEPW 96

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L  I  +       I+L    +  +KR   R      + LD   + ++ + E   + F +
Sbjct: 97  LN-IVREGYEVHY-IVLRANKEETMKRAIER------SKLDR--KTNIELVEIMWEQFNN 146

Query: 180 IARNQPDRCHIVDSAH-SFQSVATNILNIV 208
           +   + +   I+D+   S +   + I   V
Sbjct: 147 LGAYEKN---ILDTTQLSVEDTVSAIKEKV 173


>gi|323485039|ref|ZP_08090392.1| hypothetical protein HMPREF9474_02143 [Clostridium symbiosum
          WAL-14163]
 gi|323401595|gb|EGA93940.1| hypothetical protein HMPREF9474_02143 [Clostridium symbiosum
          WAL-14163]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GKTT + ++ 
Sbjct: 33 IKRGEFIVFVGPSGCGKTTLLRMIA 57


>gi|315605985|ref|ZP_07881016.1| ferric (Fe+3) ABC superfamily ATP binding cassette transporter, ABC
           protein [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312267|gb|EFU60353.1| ferric (Fe+3) ABC superfamily ATP binding cassette transporter, ABC
           protein [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 251

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 18/97 (18%)

Query: 11  GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEF 62
           G  GAGK+T ++++ R L       +    +V  T+      +AE AR + +L       
Sbjct: 34  GPNGAGKSTLLTMIGRLLDIDEGVIEVGGLNVATTK------SAELARTLSILRQENHYI 87

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99
                  + +  R  H    + P   E    + DR++
Sbjct: 88  SRLTVRQLVSFGRFPHTRGRLTPQDEE----IIDRYI 120


>gi|309812445|ref|ZP_07706200.1| adenylate kinase [Dermacoccus sp. Ellin185]
 gi|308433750|gb|EFP57627.1| adenylate kinase [Dermacoccus sp. Ellin185]
          Length = 192

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 61/222 (27%), Gaps = 44/222 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCG 58
             I   G  GAGK T    L      +        D+  T     T      + +L S G
Sbjct: 2   RLIIL-GPPGAGKGTQAERLAE---SRGIPHISTGDIFRTNIKNETELGLKVKDILASGG 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPAL--MEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                   E +       D     +        G+++          A +    +     
Sbjct: 58  YVTDEITNEIVKNRLDEADAANGFLLDGYPRTAGQVV----------ALEEMLAAKGQAL 107

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRR 174
             +L+              L +  +  ++R+  R         D  E  R+   ++   R
Sbjct: 108 DAALE--------------LTVDGEELVQRLLKRAET-SGRADDTEEVIRERQELY--VR 150

Query: 175 QIFLDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214
           +    +A    +R     VD   S   V   I   + E+  K
Sbjct: 151 ET-APLAAAYTERGLLVQVDGMGSIDEVEARINAALDEVAAK 191


>gi|331659267|ref|ZP_08360209.1| hypothetical ATP-binding protein YghS [Escherichia coli TA206]
 gi|331053849|gb|EGI25878.1| hypothetical ATP-binding protein YghS [Escherichia coli TA206]
          Length = 237

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++     +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRY 126


>gi|307326592|ref|ZP_07605786.1| protein of unknown function DUF344 [Streptomyces violaceusniger Tu
           4113]
 gi|306887786|gb|EFN18778.1| protein of unknown function DUF344 [Streptomyces violaceusniger Tu
           4113]
          Length = 330

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 35/123 (28%), Gaps = 31/123 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 78  IVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPTERERGQW----------------- 120

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +    ++H+          G+I+L DR   S Y   G          D  Q  + Q
Sbjct: 121 ----YFQRYVEHLPT-------AGEIVLFDR---SWYNRAGVERVMGFCSQDEYQRFTRQ 166

Query: 127 EVM 129
             +
Sbjct: 167 APL 169


>gi|265766061|ref|ZP_06094102.1| uridine kinase [Bacteroides sp. 2_1_16]
 gi|263253729|gb|EEZ25194.1| uridine kinase [Bacteroides sp. 2_1_16]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 2   LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
              +++       HV       L EGK +    +   +   Q E    +   +  ++ I 
Sbjct: 61  FEWSLL-----SKHVA-----LLKEGKCIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 110

Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 ++ +M D  I +D   D  L RV  R  +      +
Sbjct: 111 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVVERGRTAE 151


>gi|257063253|ref|YP_003142925.1| hypothetical protein Shel_05170 [Slackia heliotrinireducens DSM
           20476]
 gi|256790906|gb|ACV21576.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
           20476]
          Length = 436

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 10/124 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G   AGK+T +S ++    +  Y V    E     A E     +     D   +  
Sbjct: 79  VVITGGPCAGKSTAMSWVQNAFTQMGYVVLFVPE----TATELITGGVAPWTCDSNSSYQ 134

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           +  +      + V       +   K+ ++CDR    + AY          F  +L+    
Sbjct: 135 KCQLRLQFEKEKVFEQAAETMDADKVLIVCDRGTMDNKAYM-----DDLEFAQALEHFGT 189

Query: 126 QEVM 129
            EV 
Sbjct: 190 NEVQ 193


>gi|134096064|ref|YP_001101139.1| signal recognition particle receptor [Herminiimonas arsenicoxydans]
 gi|133739967|emb|CAL63018.1| Cell division protein FtsY homolog [Herminiimonas arsenicoxydans]
          Length = 408

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + I+  G+ GAGKTT I  L + LQ  +  V +
Sbjct: 211 MMIT--GVNGAGKTTTIGKLAKHLQAHHQSVLL 241


>gi|126139661|ref|XP_001386353.1| Adenylyl-sulfate kinase (APS kinase) (Adenosine-5'phosphosulfate
           kinase) (ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase) [Scheffersomyces stipitis CBS
           6054]
 gi|126093635|gb|ABN68324.1| Adenylyl-sulfate kinase (APS kinase) (Adenosine-5'phosphosulfate
           kinase) (ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase) [Scheffersomyces stipitis CBS
           6054]
          Length = 199

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+  +GK+T    L++ +  +  + +                  L      FG   +   
Sbjct: 31  GLSASGKSTIACALEQSILARGLNAYR-----------------LDGDNVRFGLNKDLGF 73

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             A R +++  +   A +         F DS         S      D  +++  ++ +P
Sbjct: 74  SEADRNENIRRISEVAKL---------FTDSCCVTLTSFISPYKQDRDLARQLHEKDNLP 124

Query: 131 DCTIILDLPVDIGLKR 146
              + +D+PV++  +R
Sbjct: 125 FVEVYVDVPVEVAEQR 140


>gi|169607379|ref|XP_001797109.1| hypothetical protein SNOG_06746 [Phaeosphaeria nodorum SN15]
 gi|111064277|gb|EAT85397.1| hypothetical protein SNOG_06746 [Phaeosphaeria nodorum SN15]
          Length = 206

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 33/151 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I F G+  +GK+T  + L++ L    Y  +                  L      
Sbjct: 22  QKGFTIWFTGLSASGKSTIATALEQHLLHLGYAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERD--SSQHLFLD 118
           FG   +       R +++  +   A +         F DSS  A         +      
Sbjct: 65  FGLNKDLGFTEKDRNENIRRIAEVAKL---------FADSSTIAITSFISPYKADRATAR 115

Query: 119 SLQEISVQEVMPDCTI---ILDLPVDIGLKR 146
            L  ++     P        +D+P+++   R
Sbjct: 116 DLHAVTTGSDEP-LAFVEVFVDIPLEVAEAR 145


>gi|326777523|ref|ZP_08236788.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326657856|gb|EGE42702.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 377

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 71/220 (32%), Gaps = 56/220 (25%)

Query: 11  GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDE 61
           G  GAGKTT + +L   L       +    DV   REP    +    A ++  +  G   
Sbjct: 55  GPNGAGKTTAVRVLATLLRYDAGRAEVAGLDV--AREPRRVRSRIGLAGQYAAVDEG--- 109

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                   +F   RL H+ N  R     G+  L DRF  +  A +G ++ S       L 
Sbjct: 110 LTGRQNLEMF--GRLFHLGNR-RARQRAGE--LLDRFDLAEAADKGAKEYSGG-MRRRLD 163

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ------ 175
             S   + PD  + LD     GL         R              + E  R       
Sbjct: 164 LASSMILQPD-VLFLD-EPTTGL-------DPRGRG----------EVWEAVRALVAGGT 204

Query: 176 ------IFLDIARNQPDRCHIVD-----SAHSFQSVATNI 204
                  +LD A     R  ++D     +  +  ++   +
Sbjct: 205 TVLLTTQYLDEADKLASRVTVIDRGRAIADDTPDALKNRV 244


>gi|255690694|ref|ZP_05414369.1| putative conjugative transposon protein TraA [Bacteroides
          finegoldii DSM 17565]
 gi|260623725|gb|EEX46596.1| putative conjugative transposon protein TraA [Bacteroides
          finegoldii DSM 17565]
          Length = 218

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 2/83 (2%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
          G GKTT  +L   +L  + Y V               R        D        ++  A
Sbjct: 14 GVGKTTLCALFASYLAERGYPVIAIDADLQASLYRH-RQREKDVAPDVQAPWNVDLLDTA 72

Query: 74 ARLDHVENVIRPALMEGKILLCD 96
           + DH++NV+        I+L D
Sbjct: 73 -KGDHLKNVMSKLKTVPGIVLID 94


>gi|242309386|ref|ZP_04808541.1| shikimate kinase [Helicobacter pullorum MIT 98-5489]
 gi|239523957|gb|EEQ63823.1| shikimate kinase [Helicobacter pullorum MIT 98-5489]
          Length = 163

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI-V 191
              LD+  +  L R+    +  E +    F+ KD        +++L   +   D  H  +
Sbjct: 96  VFFLDIDFENILSRL----NDNEVSTRPLFQDKDKAF-----KLYLQRLQIYKDSAHFCI 146

Query: 192 DSAHSFQSVATNILNIV 208
           ++     ++   ILN +
Sbjct: 147 NANADIPTITKEILNSL 163


>gi|191172555|ref|ZP_03034095.1| putative lipoprotein [Escherichia coli F11]
 gi|190907223|gb|EDV66822.1| putative lipoprotein [Escherichia coli F11]
          Length = 232

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++     +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRY 121


>gi|192289252|ref|YP_001989857.1| sulfate adenylyltransferase, large subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192283001|gb|ACE99381.1| sulfate adenylyltransferase, large subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 636

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 19/87 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GKTT    L+R L  +           G+P       +LL       G  ++ 
Sbjct: 459 FTGLPGSGKTTIARALERRLFDRG----------GSP-------ILLDGDTLRAGLNSDL 501

Query: 69  IVFAAARLDHVENV--IRPALMEGKIL 93
               A R +++  +  I   L     +
Sbjct: 502 GFSPADRAENIRRLGEIAAHLAANGHI 528


>gi|146325073|sp|Q92DL6|POTA_LISIN RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
          Length = 366

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60


>gi|146311434|ref|YP_001176508.1| ABC transporter related [Enterobacter sp. 638]
 gi|145318310|gb|ABP60457.1| amino acid ABC transporter ATP-binding protein, PAAT family
          [Enterobacter sp. 638]
          Length = 271

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P       A R +
Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLNGGEILIDNKPTRALTGTALRQL 98


>gi|116812171|dbj|BAF35979.1| ATP sulfurylase/APS kinase [Molgula tectiformis]
          Length = 611

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 7/65 (10%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I F G+ GAGKTT    L+ FL  K         P  +   +  RH L        
Sbjct: 37 RGCTIWFTGLSGAGKTTVAMKLEEFLCSKGI-------PAYSLDGDNIRHGLNKDLGFSP 89

Query: 63 GAEAE 67
              E
Sbjct: 90 DDREE 94


>gi|109157291|pdb|2CDN|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Adenylate
           Kinase Complexed With Two Molecules Of Adp And Mg
          Length = 201

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 49/210 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSCGVDEFGAE 65
           G  GAGK T    L   L         T E       E  +        L  G       
Sbjct: 27  GPPGAGKGTQAVKLAEKL---GIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDL 83

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124
              +V         + +  P    G   + D +  S                 +L E + 
Sbjct: 84  TNELVD--------DRLNNPDAANGF--ILDGYPRS------------VEQAKALHEMLE 121

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLD--- 179
            +    D  +   +  ++ L+R++ R    ++    L+              +++ D   
Sbjct: 122 RRGTDIDAVLEFRVSEEVLLERLKGRGRADDTDDVILNRM------------KVYRDETA 169

Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +     D+   VD+  +   V    L  +
Sbjct: 170 PLLEYYRDQLKTVDAVGTMDEVFARALRAL 199


>gi|28896418|ref|NP_802768.1| dephospho-CoA kinase [Streptococcus pyogenes SSI-1]
 gi|28811669|dbj|BAC64601.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 203

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52
              + I   G   +GK+T + ++    ++  Y       V    +  G    EA R    
Sbjct: 4   KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 59

Query: 53  --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +L + G  +    +E +      +         +I+  L   +             + 
Sbjct: 60  NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 107

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            +  +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         + 
Sbjct: 108 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 165

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                      L I   +P    ++D+    +++   + + +  L   R
Sbjct: 166 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 203


>gi|16132090|ref|NP_418689.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12
           substr. MG1655]
 gi|89110984|ref|AP_004764.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12
           substr. W3110]
 gi|170083707|ref|YP_001733027.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12
           substr. DH10B]
 gi|218692654|ref|YP_002400866.1| D-gluconate kinase [Escherichia coli ED1a]
 gi|218702971|ref|YP_002410600.1| D-gluconate kinase [Escherichia coli IAI39]
 gi|218707874|ref|YP_002415393.1| D-gluconate kinase [Escherichia coli UMN026]
 gi|238903369|ref|YP_002929165.1| D-gluconate kinase, thermosensitive [Escherichia coli BW2952]
 gi|253775109|ref|YP_003037940.1| D-gluconate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254164193|ref|YP_003047303.1| D-gluconate kinase [Escherichia coli B str. REL606]
 gi|293402893|ref|ZP_06646990.1| thermosensitive gluconokinase [Escherichia coli FVEC1412]
 gi|298378419|ref|ZP_06988303.1| gluconokinase [Escherichia coli FVEC1302]
 gi|300899418|ref|ZP_07117673.1| shikimate kinase [Escherichia coli MS 198-1]
 gi|300906116|ref|ZP_07123835.1| shikimate kinase [Escherichia coli MS 84-1]
 gi|301028108|ref|ZP_07191385.1| shikimate kinase [Escherichia coli MS 196-1]
 gi|301304679|ref|ZP_07210787.1| shikimate kinase [Escherichia coli MS 124-1]
 gi|301643384|ref|ZP_07243434.1| shikimate kinase [Escherichia coli MS 146-1]
 gi|309792909|ref|ZP_07687337.1| shikimate kinase [Escherichia coli MS 145-7]
 gi|312965985|ref|ZP_07780211.1| thermosensitive gluconokinase [Escherichia coli 2362-75]
 gi|729610|sp|P39208|IDNK_ECOLI RecName: Full=Thermosensitive gluconokinase; AltName:
           Full=Gluconate kinase 1
 gi|537110|gb|AAA97165.1| gluconate kinase [Escherichia coli str. K-12 substr. MG1655]
 gi|1790719|gb|AAC77225.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12
           substr. MG1655]
 gi|85677015|dbj|BAE78265.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K12
           substr. W3110]
 gi|169891542|gb|ACB05249.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12
           substr. DH10B]
 gi|218372957|emb|CAR20838.1| D-gluconate kinase, thermosensitive [Escherichia coli IAI39]
 gi|218430218|emb|CAR11077.1| D-gluconate kinase, thermosensitive [Escherichia coli ED1a]
 gi|218434971|emb|CAR15912.1| D-gluconate kinase, thermosensitive [Escherichia coli UMN026]
 gi|222036040|emb|CAP78785.1| Thermosensitive gluconokinase [Escherichia coli LF82]
 gi|238860755|gb|ACR62753.1| D-gluconate kinase, thermosensitive [Escherichia coli BW2952]
 gi|242379787|emb|CAQ34615.1| D-gluconate kinase, thermosensitive [Escherichia coli BL21(DE3)]
 gi|253326153|gb|ACT30755.1| carbohydrate kinase, thermoresistant glucokinase family
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253976096|gb|ACT41767.1| D-gluconate kinase, thermosensitive [Escherichia coli B str.
           REL606]
 gi|253980252|gb|ACT45922.1| D-gluconate kinase, thermosensitive [Escherichia coli BL21(DE3)]
 gi|260450912|gb|ACX41334.1| carbohydrate kinase, thermoresistant glucokinase family
           [Escherichia coli DH1]
 gi|291429808|gb|EFF02822.1| thermosensitive gluconokinase [Escherichia coli FVEC1412]
 gi|298280753|gb|EFI22254.1| gluconokinase [Escherichia coli FVEC1302]
 gi|299878805|gb|EFI87016.1| shikimate kinase [Escherichia coli MS 196-1]
 gi|300356996|gb|EFJ72866.1| shikimate kinase [Escherichia coli MS 198-1]
 gi|300402059|gb|EFJ85597.1| shikimate kinase [Escherichia coli MS 84-1]
 gi|300840029|gb|EFK67789.1| shikimate kinase [Escherichia coli MS 124-1]
 gi|301078214|gb|EFK93020.1| shikimate kinase [Escherichia coli MS 146-1]
 gi|308123195|gb|EFO60457.1| shikimate kinase [Escherichia coli MS 145-7]
 gi|312289228|gb|EFR17122.1| thermosensitive gluconokinase [Escherichia coli 2362-75]
 gi|312948921|gb|ADR29748.1| D-gluconate kinase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315138819|dbj|BAJ45978.1| thermosensitive gluconokinase [Escherichia coli DH1]
 gi|315255627|gb|EFU35595.1| shikimate kinase [Escherichia coli MS 85-1]
 gi|323950663|gb|EGB46541.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli
           H252]
 gi|323975389|gb|EGB70490.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli
           TW10509]
 gi|324005141|gb|EGB74360.1| shikimate kinase [Escherichia coli MS 57-2]
 gi|327250214|gb|EGE61933.1| thermosensitive gluconokinase [Escherichia coli STEC_7v]
          Length = 187

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174


>gi|148544868|ref|YP_001272238.1| ABC transporter related [Lactobacillus reuteri DSM 20016]
 gi|184154206|ref|YP_001842547.1| cobalt ABC transporter ATP-binding component [Lactobacillus reuteri
           JCM 1112]
 gi|227364008|ref|ZP_03848108.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri MM2-3]
 gi|325683213|ref|ZP_08162729.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri MM4-1A]
 gi|148531902|gb|ABQ83901.1| ABC transporter related [Lactobacillus reuteri DSM 20016]
 gi|183225550|dbj|BAG26067.1| cobalt ABC transporter ATP-binding component [Lactobacillus reuteri
           JCM 1112]
 gi|227070930|gb|EEI09253.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri MM2-3]
 gi|324977563|gb|EGC14514.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri MM4-1A]
          Length = 460

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G+ G+GK+T + L+   L +   ++       P         +  L+   +D    E E 
Sbjct: 36  GVSGSGKSTILKLIAGLLPKYGGEIVTGAVDVPTDAQIGMVFQDPLMQFALDTPRHELEF 95

Query: 69  IVFAAAR-LDHVENVIRPALMEGKI 92
            +       D +   ++ AL  GK+
Sbjct: 96  TLENCQVPTDKIPERVKEALQFGKV 120


>gi|157163743|ref|YP_001461061.1| D-gluconate kinase [Escherichia coli HS]
 gi|307312957|ref|ZP_07592585.1| carbohydrate kinase, thermoresistant glucokinase family
           [Escherichia coli W]
 gi|157069423|gb|ABV08678.1| thermosensitive gluconokinase [Escherichia coli HS]
 gi|306907125|gb|EFN37632.1| carbohydrate kinase, thermoresistant glucokinase family
           [Escherichia coli W]
 gi|315063575|gb|ADT77902.1| D-gluconate kinase, thermosensitive [Escherichia coli W]
 gi|320200602|gb|EFW75188.1| Gluconokinase [Escherichia coli EC4100B]
 gi|323380345|gb|ADX52613.1| carbohydrate kinase, thermoresistant glucokinase family
           [Escherichia coli KO11]
          Length = 187

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174


>gi|157825358|ref|YP_001493078.1| Signal recognition particle protein [Rickettsia akari str.
           Hartford]
 gi|157799316|gb|ABV74570.1| Signal recognition particle protein [Rickettsia akari str.
           Hartford]
          Length = 449

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT    L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|332042789|gb|EGI78989.1| deoxynucleoside kinase [Lacinutrix algicola 5H-3-7-4]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 34/190 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VF 71
           GAGKTT   LL +  +                  +   +  L    ++    +  +   F
Sbjct: 10  GAGKTTLTKLLAKHYK------------WEAQLEDVVDNPYLDDFYNQMERWSFNLQVYF 57

Query: 72  AAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEIS 124
             +R   V  +       GK ++ DR  + D+     +    G   +       SL E+ 
Sbjct: 58  LNSRFRQVAQI----RESGKEIIQDRTIYEDAHIFAPNLHAMGLMTNRDFENYSSLFELM 113

Query: 125 VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
              V  PD  I L          + N  S       DY     +    +  + +      
Sbjct: 114 EGFVQGPDLLIYL-------RSSISNLVSQIHKRGRDYENSISIDYLSRLNERYEAWIHG 166

Query: 184 Q-PDRCHIVD 192
               +  I+D
Sbjct: 167 YNKGKLLIID 176


>gi|266622808|ref|ZP_06115743.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Clostridium hathewayi DSM 13479]
 gi|288865433|gb|EFC97731.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Clostridium hathewayi DSM 13479]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GKTT + ++ 
Sbjct: 33 IKRGEFIVFVGPSGCGKTTLLRMIA 57


>gi|170055096|ref|XP_001863429.1| KTI12 [Culex quinquefasciatus]
 gi|167875173|gb|EDS38556.1| KTI12 [Culex quinquefasciatus]
          Length = 281

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 11/91 (12%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +   G+  +GK+T  + +K   +     VH+  E      A   ++        E    
Sbjct: 3  LVVISGLPASGKSTRAAQIKAHFEGLGKTVHIVSERDCIRVAGYEKNEYFRDSQKEKLVR 62

Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
          +            V++ +   L +  +L+ D
Sbjct: 63 S-----------SVKSHVLRLLNKNDLLIID 82


>gi|163757350|ref|ZP_02164439.1| putative cell division protein [Hoeflea phototrophica DFL-43]
 gi|162284852|gb|EDQ35134.1| putative cell division protein [Hoeflea phototrophica DFL-43]
          Length = 529

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 18/133 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    D  G++  +  
Sbjct: 332 GVNGTGKTTTIGKLAAKLHSGGLKVTLAA--GDTFRAAAIEQ--LKIWGDRTGSKVVSTK 387

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128
             A            A  +G  +L    +D+       R  ++   +D L ++   + ++
Sbjct: 388 LGADAAGLAYEAFETARADGADVLI---IDT-----AGRLQNRTELMDELAKVVRVIGKL 439

Query: 129 MPDC--TII--LD 137
            PD   T++  LD
Sbjct: 440 DPDAPHTVLQTLD 452


>gi|224499673|ref|ZP_03668022.1| hypothetical protein LmonF1_08244 [Listeria monocytogenes Finland
          1988]
 gi|254830205|ref|ZP_05234860.1| hypothetical protein Lmon1_02552 [Listeria monocytogenes 10403S]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|119467388|ref|XP_001257500.1| multidrug resistance protein 1, 2, 3 (p glycoprotein 1, 2, 3)
            [Neosartorya fischeri NRRL 181]
 gi|119405652|gb|EAW15603.1| multidrug resistance protein 1, 2, 3 (p glycoprotein 1, 2, 3)
            [Neosartorya fischeri NRRL 181]
          Length = 1272

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRF 27
            G F++F G  G GK+T I+LL RF
Sbjct: 1051 GKFVAFVGPSGCGKSTMINLLARF 1074


>gi|44836|emb|CAA32144.1| unnamed protein product [Neisseria gonorrhoeae]
          Length = 356

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L ++ Q +   V +
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLL 250


>gi|191168714|ref|ZP_03030493.1| thermosensitive gluconokinase [Escherichia coli B7A]
 gi|237703944|ref|ZP_04534425.1| thermosensitive gluconokinase [Escherichia sp. 3_2_53FAA]
 gi|301024313|ref|ZP_07188003.1| shikimate kinase [Escherichia coli MS 69-1]
 gi|331665937|ref|ZP_08366831.1| shikimate kinase [Escherichia coli TA143]
 gi|190901262|gb|EDV61032.1| thermosensitive gluconokinase [Escherichia coli B7A]
 gi|226901856|gb|EEH88115.1| thermosensitive gluconokinase [Escherichia sp. 3_2_53FAA]
 gi|281181366|dbj|BAI57696.1| D-gluconate kinase [Escherichia coli SE15]
 gi|300396638|gb|EFJ80176.1| shikimate kinase [Escherichia coli MS 69-1]
 gi|315288363|gb|EFU47761.1| shikimate kinase [Escherichia coli MS 110-3]
 gi|323955554|gb|EGB51318.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli
           H263]
 gi|323960309|gb|EGB55950.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli
           H489]
 gi|331056988|gb|EGI28982.1| shikimate kinase [Escherichia coli TA143]
          Length = 187

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQEDEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174


>gi|157828091|ref|YP_001494333.1| signal recognition particle protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165932791|ref|YP_001649580.1| signal recognition particle protein [Rickettsia rickettsii str.
           Iowa]
 gi|157800572|gb|ABV75825.1| signal recognition particle protein [Rickettsia rickettsii str.
           'Sheila Smith']
 gi|165907878|gb|ABY72174.1| signal recognition particle, subunit FFH/SRP54 [Rickettsia
           rickettsii str. Iowa]
          Length = 449

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT    L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASGKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|317154837|ref|YP_004122885.1| adenylylsulfate kinase [Desulfovibrio aespoeensis Aspo-2]
 gi|316945088|gb|ADU64139.1| adenylylsulfate kinase [Desulfovibrio aespoeensis Aspo-2]
          Length = 199

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 20/92 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T    +++ L  +   V                  +        G   
Sbjct: 30  IWFTGLSGAGKSTIAHEVEKTLFDRGMRVK-----------------VFDGDNVRHGLCG 72

Query: 67  EAIVFAAARLD---HVENVIRPALMEGKILLC 95
           +      AR +    +  +++  L  G I LC
Sbjct: 73  DLSFSLEARAENTRRIAEMVKLFLENGTICLC 104


>gi|312968683|ref|ZP_07782892.1| uncharacterized ATP-binding protein yghS [Escherichia coli 2362-75]
 gi|312286901|gb|EFR14812.1| uncharacterized ATP-binding protein yghS [Escherichia coli 2362-75]
          Length = 237

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELTSRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +    +   G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126


>gi|302868575|ref|YP_003837212.1| hypothetical protein Micau_4121 [Micromonospora aurantiaca ATCC
           27029]
 gi|302571434|gb|ADL47636.1| hypothetical protein Micau_4121 [Micromonospora aurantiaca ATCC
           27029]
          Length = 201

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 43/147 (29%), Gaps = 30/147 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GKTT     +R          +  +          R +L           
Sbjct: 18  LVIIRGNSGSGKTTAARETRRRF---GRGAALLEQDY------LRRTLLREHDSAHIQPV 68

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A   + A AR          AL  G  ++           +G   + ++  +  L  +  
Sbjct: 69  APTFITATART---------ALDLGYHVIV----------EGILHTERYATV--LHHLID 107

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYS 152
               P     LD+  D  ++R  NR  
Sbjct: 108 WHPGPVAVFYLDVSFDETVRRHLNRDE 134


>gi|257870167|ref|ZP_05649820.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus gallinarum EG2]
 gi|257804331|gb|EEV33153.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus gallinarum EG2]
          Length = 403

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           N G      G+ G+GK+T I LL R ++    D+++  E     + E  R V    
Sbjct: 51  NEGEIFVIMGLSGSGKSTLIRLLNRLIEPSGGDIYIDGEDIAKMSKEELREVRRHK 106


>gi|225848020|ref|YP_002728183.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643921|gb|ACN98971.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 166

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 61/200 (30%), Gaps = 50/200 (25%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK+T   LL     R   DV    E          + +    G           ++  
Sbjct: 11  GSGKSTVGKLLADKTSRDFVDVDKLIE---EREKMKIKDIFEKKGE----------LYF- 56

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
              +  +  ++  L    +++                       +++ ++    +     
Sbjct: 57  --RELEKKYLQELLNTQNLVVST-------------GGGLGADAENMNQMKKNGI----V 97

Query: 134 IILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRR--QIFLDIARNQPDRCHI 190
           I LDL ++  L+R++N  +    +  LD   +K     +K      +             
Sbjct: 98  IWLDLNLNTILERIKNDENRPLLNQPLDKI-KKLFDERKKVYGLATY------------R 144

Query: 191 VDS-AHSFQSVATNILNIVW 209
           +++   +   +   ILN + 
Sbjct: 145 INAENKTPFQIVEEILNKIK 164


>gi|39933830|ref|NP_946106.1| putative bifunctional ATP-sulfurylase large subunit/adenylyl
           sulfate kinase CysN/CysC [Rhodopseudomonas palustris
           CGA009]
 gi|39647677|emb|CAE26197.1| putative CysN/CysC bifunctional enzyme, ATP-sulfurylase large
           subunit and adenylyl sulfate kinase [Rhodopseudomonas
           palustris CGA009]
          Length = 636

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 19/87 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GKTT    L+R L  +           G+P       +LL       G  ++ 
Sbjct: 459 FTGLPGSGKTTIARALERRLFDRG----------GSP-------ILLDGDTLRAGLNSDL 501

Query: 69  IVFAAARLDHVENV--IRPALMEGKIL 93
               A R +++  +  I   L     +
Sbjct: 502 GFSPADRAENIRRLGEIAAHLAANGHI 528


>gi|86143696|ref|ZP_01062072.1| guanylate kinase [Leeuwenhoekiella blandensis MED217]
 gi|85829739|gb|EAQ48201.1| guanylate kinase [Leeuwenhoekiella blandensis MED217]
          Length = 191

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 33/169 (19%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF--------LQRKNYDVHVTREPGGTPAAEAARHVL 54
           +G  I F    G+GKTT +  L           +   + +   T + G      + +   
Sbjct: 4   TGKLIVFSAPSGSGKTTIVRWLLEKKELNLEFSISAASREPRPTEKDGVDYYFLSLKEFK 63

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                DEF    E   +       +++ +     EGK ++ D                  
Sbjct: 64  RRIKEDEFLEWEEV--YRDNFYGTLKSEVERIWKEGKHVIFD------------------ 103

Query: 115 LFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYF 162
             +D +  + ++++ P+ T+ +   P    ++ ++ R   R++   D  
Sbjct: 104 --IDVVGGLDIKKLYPERTLAVFVKPP--SIEELKIRLKKRKTESEDRI 148


>gi|325918862|ref|ZP_08180941.1| Bifunctional adenylylsulfate kinase /sulfate adenylyltransferase
           subunit 1 [Xanthomonas vesicatoria ATCC 35937]
 gi|325534926|gb|EGD06843.1| Bifunctional adenylylsulfate kinase /sulfate adenylyltransferase
           subunit 1 [Xanthomonas vesicatoria ATCC 35937]
          Length = 501

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 336 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 378

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 379 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 432

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 433 --------VFVDVPLAVAEAR 445


>gi|325125121|gb|ADY84451.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
          subsp. bulgaricus 2038]
          Length = 236

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          ++ G+FI+  G  GAGK+T I+ L
Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47


>gi|315281474|ref|ZP_07870092.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          marthii FSL S4-120]
 gi|313614874|gb|EFR88400.1| spermidine/putrescine import ATP-binding protein PotA [Listeria
          marthii FSL S4-120]
          Length = 364

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58


>gi|310659129|ref|YP_003936850.1| iron compound ABC transporter ATP-binding protein [Clostridium
          sticklandii DSM 519]
 gi|308825907|emb|CBH21945.1| Iron compound ABC transporter, ATP-binding protein [Clostridium
          sticklandii]
          Length = 271

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           G F +  G  G+GKTT   ++ + +      V +  E
Sbjct: 33 KGKFYTILGPNGSGKTTLAKIITKTMDTPKNKVFLLSE 70


>gi|301054457|ref|YP_003792668.1| hypothetical protein BACI_c29040 [Bacillus anthracis CI]
 gi|300376626|gb|ADK05530.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
          str. CI]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|297622976|ref|YP_003704410.1| adenylylsulfate kinase [Truepera radiovictrix DSM 17093]
 gi|297164156|gb|ADI13867.1| adenylylsulfate kinase [Truepera radiovictrix DSM 17093]
          Length = 209

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  + L+  L  + Y  +                 LL       G     
Sbjct: 39  FTGLSGAGKSTVANALEGALHSRGYHTY-----------------LLDGDNVRHGLNKNL 81

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              A  R +++     V +  +  G I+L 
Sbjct: 82  GFSAEDREENIRRIGEVAKLFVDAGIIVLT 111


>gi|282899839|ref|ZP_06307801.1| Adenylyl-sulfate kinase (CyrN) [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195321|gb|EFA70256.1| Adenylyl-sulfate kinase (CyrN) [Cylindrospermopsis raciborskii
           CS-505]
          Length = 219

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GKTT    L+R L +K +    T               +L       G  A+ 
Sbjct: 51  FTGLSGSGKTTLALELERILFQKGW---YTF--------------VLDGDNIRHGLCADL 93

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              AA R +++     V +     G +++ 
Sbjct: 94  GFSAADRAENIRRIGEVAKLFADSGCLVIT 123


>gi|255710519|ref|XP_002551543.1| KLTH0A01914p [Lachancea thermotolerans]
 gi|238932920|emb|CAR21101.1| KLTH0A01914p [Lachancea thermotolerans]
          Length = 1499

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 15/133 (11%)

Query: 14   GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFGAEAEAI 69
            GAGKTT ++ L +  +            G    A   R           V E     E++
Sbjct: 892  GAGKTTLLNTLAQ--RNVGIITGDMLVNGNHIDASFERRTGYVQQQDVHVKEMTVR-ESL 948

Query: 70   VFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ- 126
             FAA   R   V    + A +E  I + D      YA     D    L ++  +++S+  
Sbjct: 949  QFAARMRRPQSVPEAEKMAYVEDIIEILD---MEEYADALVGDVGYGLNVEQRKKVSIGV 1005

Query: 127  --EVMPDCTIILD 137
                 PD  + LD
Sbjct: 1006 ELAAKPDLLLFLD 1018


>gi|237743070|ref|ZP_04573551.1| guanylate kinase [Fusobacterium sp. 7_1]
 gi|229433366|gb|EEO43578.1| guanylate kinase [Fusobacterium sp. 7_1]
          Length = 185

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVISGPSGAGKSTVCKLVRERL 28


>gi|228915538|ref|ZP_04079127.1| hypothetical protein bthur0012_27570 [Bacillus thuringiensis
          serovar pulsiensis BGSC 4CC1]
 gi|228844185|gb|EEM89245.1| hypothetical protein bthur0012_27570 [Bacillus thuringiensis
          serovar pulsiensis BGSC 4CC1]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|228966121|ref|ZP_04127184.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228793606|gb|EEM41146.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 219

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 66/196 (33%), Gaps = 27/196 (13%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +   +   T       +++  +H ++        
Sbjct: 20  IVI-GISGHGAAGKTTFTNRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76

Query: 64  AEAEAIVFAAAR--LDHVENVIRPALMEGKILL---CDRFLDSSYAYQGERDSSQHLFLD 118
              +     A      H+      AL     ++    D +   ++ Y   +  S    + 
Sbjct: 77  HRYK---MTACHPAAHHLA-----ALERDIHMVRAGIDFYTIDTH-YMKSKLISSENKVT 127

Query: 119 SLQEISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ +S   + P   D  I      +  L R  +R      A ++Y  +     HE+RR 
Sbjct: 128 IVEGMSAAFINPDLFDLKIYFYTDGETELIRRSSRDIAERGADINYLRQS----HEERRI 183

Query: 176 IFLDIARNQPDRCHIV 191
            +     +   R  I+
Sbjct: 184 QYEVFMHSYSQRFDII 199


>gi|255082426|ref|XP_002504199.1| type II secretory pathway family [Micromonas sp. RCC299]
 gi|226519467|gb|ACO65457.1| type II secretory pathway family [Micromonas sp. RCC299]
          Length = 650

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GK+T++S +  +L + +  V +      T  A A   +   C         
Sbjct: 444 IVFVGVNGVGKSTNLSKVAYWLLQHDVKVMIAA--CDTFRAGAVEQLRTHCKRLGVPLFE 501

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124
               +     +     I+ A  +G   +L D            R       + +L + I+
Sbjct: 502 RG--YEKDPANVASEAIKAAQRQGCDAVLVD---------TAGRMQDNEPLMRALSKLIN 550

Query: 125 VQEVMPDCTII 135
           + +  PD T+ 
Sbjct: 551 MND--PDLTLF 559


>gi|225011478|ref|ZP_03701916.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-2A]
 gi|225003981|gb|EEG41953.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-2A]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 71/226 (31%), Gaps = 44/226 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKT+   LL +                     +   +  L    +     +
Sbjct: 3   IAIAGNIGAGKTSLTELLAKH------------YNWEAHFEDVIDNPYLDDFYNHMERWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114
             +   F  +R + +           K ++ DR  + D+        +     +RD + +
Sbjct: 51  FNLQIYFLKSRFEQL----LSFRENKKTIIQDRTIYEDAHIFAPNLNAMGLMNQRDFNNY 106

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
             + +L E  +    PD  I L          + N  +       DY     +    +  
Sbjct: 107 KGIFNLMESLIDG--PDLLIYL-------RSSIPNLVNKIHKRGRDYENSISIDYLSRLN 157

Query: 175 QIFLDIARN-QPDRCHIVDSAHSFQSV-----ATNILNIVWELVQK 214
           + +          +  I+D   +   V      ++++ ++ + +++
Sbjct: 158 ERYEAWVSTYDAKKIIIIDVD-TLDFVDNKADLSSVIKVIDDKLKQ 202


>gi|224418232|ref|ZP_03656238.1| adenylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|253827557|ref|ZP_04870442.1| adenylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313141765|ref|ZP_07803958.1| adenylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|253510963|gb|EES89622.1| adenylate kinase [Helicobacter canadensis MIT 98-5491]
 gi|313130796|gb|EFR48413.1| adenylate kinase [Helicobacter canadensis MIT 98-5491]
          Length = 190

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 38/217 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LF+   G  G+GKTT   ++ +     +  VH           E  R  + S    
Sbjct: 1   MKK-LFLVI-GAPGSGKTTDAEIISK--NNSDSMVHY-------STGELLRAEIASGSEL 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               ++         LD V   I  A+      I++ D +  S    Q          L 
Sbjct: 50  GKLIDSFTSKGNLVPLDIVVKTIVDAISNAPKDIVIIDGYPRSVEQMQ-----ELDKILA 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             QEI ++ V         + V++  K   +R   R     D  E    + H +  +++L
Sbjct: 105 QKQEIILESV---------IEVEVSEKVACDRVLGRARGADDSVE----VFHNRM-KVYL 150

Query: 179 D-IARNQ-----PDRCHIVDSAHSFQSVATNILNIVW 209
           + +A  Q         H ++   + + + + + N + 
Sbjct: 151 EPLAEIQKFYTSKGILHKINGERTIEEIVSEMENFIK 187


>gi|186511259|ref|NP_001118870.1| ATP binding / nucleobase, nucleoside, nucleotide kinase
           [Arabidopsis thaliana]
          Length = 136

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 6/84 (7%)

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
           +V  + P   +  D P +   +R+ +R   RE   ++  +++  +  E      L I   
Sbjct: 50  NVARIEPAFVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVEST----LPIISY 105

Query: 183 -NQPDRCHIVDSAHSFQSVATNIL 205
                +   +++A S + V   + 
Sbjct: 106 YQSKGKLRKINAAKSSEEVFEAVR 129


>gi|167563423|ref|ZP_02356339.1| adenylylsulfate kinase [Burkholderia oklahomensis EO147]
          Length = 203

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                      + ++L       G  ++   
Sbjct: 20 GLPGAGKTTTANALLNRL-----------------LGSGVKAIVLDGDTLRTGLCSDLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89


>gi|218904064|ref|YP_002451898.1| hypothetical protein BCAH820_2948 [Bacillus cereus AH820]
 gi|218535923|gb|ACK88321.1| hypothetical protein BCAH820_2948 [Bacillus cereus AH820]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|118464038|ref|YP_880679.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium avium 104]
 gi|254774315|ref|ZP_05215831.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|118165325|gb|ABK66222.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase
           [Mycobacterium avium 104]
          Length = 616

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 20/95 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  + F G+ G+GK++   L+++ L  K    +                 +L       
Sbjct: 444 RGKTVWFTGLSGSGKSSVAMLVEQKLLEKGAQAY-----------------VLDGDNLRH 486

Query: 63  GAEAEAIVFAAARLDHVENVIRPA--LME-GKILL 94
           G  A+     A R +++  +   A  L + G ++L
Sbjct: 487 GLNADLGFSMADRAENLRRLAHVAALLADCGNVVL 521


>gi|187479153|ref|YP_787178.1| hypothetical protein BAV2679 [Bordetella avium 197N]
 gi|115423740|emb|CAJ50290.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 351

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I  +   L  +   V    +P  T   +                  
Sbjct: 142 ILFEGRDAAGKGGAIKRMMEHLNPRGARVVALEKPSDTERGQW----------------- 184

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 185 ----YFQRYVQHLPT-------AGEIVLFDRSWY 207


>gi|110835427|ref|YP_694286.1| cell division protein FtsY [Alcanivorax borkumensis SK2]
 gi|110648538|emb|CAL18014.1| Cell division protein FtsY [Alcanivorax borkumensis SK2]
          Length = 397

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 18/153 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L    + +   V +    G T  A A   + +    ++    A+   
Sbjct: 199 GVNGVGKTTTIGKLACRFKAEGKSVMLAA--GDTFRAAAVEQLQVWGERNDIPVVAQH-- 254

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
             A     V + ++ A   G  IL+ D            R  ++   +D L ++   +++
Sbjct: 255 TGADSASVVYDAVQAAQSRGADILIAD---------TAGRLHTRGNLMDELTKVTRVMKK 305

Query: 128 VMPDC--TIILDLPVDIGLKRVQNRYSLRESAC 158
           ++PD    ++L L    G   +      R++A 
Sbjct: 306 LIPDAPHEVLLVLDAGTGQNAINQAEQFRDAAG 338


>gi|51892421|ref|YP_075112.1| iron-siderophore uptake ABC system ATP-binding component
           [Symbiobacterium thermophilum IAM 14863]
 gi|51856110|dbj|BAD40268.1| iron-siderophore uptake ABC system ATP-binding component
           [Symbiobacterium thermophilum IAM 14863]
          Length = 562

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G GK+T +  L R L        +   P   G+  + A R  +LS G          
Sbjct: 319 GPNGCGKSTLLKALARLLPHAGGTALLDGRPITAGSQRSFARRLAVLSQGAAAPPEVTVE 378

Query: 69  IVFAAARLDH 78
            + A  R  H
Sbjct: 379 ELVAMGRFPH 388


>gi|15963925|ref|NP_384278.1| hypothetical protein SMc02847 [Sinorhizobium meliloti 1021]
 gi|15073100|emb|CAC41559.1| Hypothetical protein SMc02847 [Sinorhizobium meliloti 1021]
          Length = 122

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I   G+ G+GKTT    L + L+  +  V
Sbjct: 1  MLIILGGLPGSGKTTIARALAKRLRAVHVRV 31


>gi|121612417|ref|YP_001000305.1| hypothetical protein CJJ81176_0632 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87250499|gb|EAQ73457.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 162

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 52  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123


>gi|332111192|gb|EGJ11224.1| L-serine ammonia-lyase [Rubrivivax benzoatilyticus JA2]
          Length = 464

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 98  FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD-LPVDIGLKRVQNRYSLRES 156
           +L  S    G+   S    L     + +    PD T+ +D +P  +   R   R +L   
Sbjct: 49  WLYGSLGATGKGHGSDTAVL-----LGLAGHEPD-TVPIDEVPALLAAIRASARLALLGR 102

Query: 157 ACLDYFERKDVMIHEK 172
             +D+ E +D+  H +
Sbjct: 103 QAVDFIETRDLKFHRR 118


>gi|320546282|ref|ZP_08040602.1| deoxynucleoside kinase [Streptococcus equinus ATCC 9812]
 gi|320449059|gb|EFW89782.1| deoxynucleoside kinase [Streptococcus equinus ATCC 9812]
          Length = 212

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 29/163 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GKTT+ SLL + L           EP            +L    ++     
Sbjct: 2   IILAGMIGVGKTTYTSLLAKEL---GTTAFF--EPVDNNP-------ILDKYYEDPEKYG 49

Query: 67  EAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQ----HL 115
            A+ ++   +       I+ A      +L DR  + D+ + Y    QG     +      
Sbjct: 50  FALQIYFLNKR---FKSIKEAYEADNNVL-DRSIYEDALFTYINTLQGSISDQEYNIYLE 105

Query: 116 FLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRES 156
            LD++ E         PD  I L+   D  +  ++ R    E 
Sbjct: 106 LLDNMMEEIDGLPKKAPDLLIYLEGSFDHIMNNIKKRGRDFEQ 148


>gi|317013767|gb|ADU81203.1| guanylate kinase [Helicobacter pylori Gambia94/24]
          Length = 206

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           MN+   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MNNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|297516357|ref|ZP_06934743.1| D-gluconate kinase [Escherichia coli OP50]
          Length = 186

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 102 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 148

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 149 DINHDIANVTEQCRQAVLAIRQNRI 173


>gi|228922362|ref|ZP_04085669.1| hypothetical protein bthur0011_33520 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228837417|gb|EEM82751.1| hypothetical protein bthur0011_33520 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 195

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 25/164 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 8   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 57  ----FIMNQKMFMEAKIKEFQNVKNSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
            L ++  +E   D    LD+       R  N  +   S   + F
Sbjct: 113 ELYKL--RECRSDAIFYLDVTKKNVYARKNNDRTRNRSTFEEQF 154


>gi|207721699|ref|YP_002252138.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia
           solanacearum MolK2]
 gi|206586861|emb|CAQ17446.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia
           solanacearum MolK2]
          Length = 214

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 26/179 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I  EG  G GKT     L   L+       +   P   P                   + 
Sbjct: 9   IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQL 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             ++    R   +      A + G+ ++ D FL     +      +  L    L +   +
Sbjct: 62  RFLL---QRTQRLA-AWHKATLAGERIVADSFLPRDRLFAQLTLPADELV---LYDAMAR 114

Query: 127 EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            + P     D  + L    +  L R+  R    E+         DV   E+    + ++
Sbjct: 115 ALAPPPQRIDLVVCLQARAEDLLPRIARRAVPFEAGI-------DVEYLERICAAYGEL 166


>gi|187251716|ref|YP_001876198.1| putative ipoprotein releasing system [Elusimicrobium minutum
          Pei191]
 gi|186971876|gb|ACC98861.1| Putative lipoprotein-releasing system [Elusimicrobium minutum
          Pei191]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
          N G FI   G  G+GK+T ++++ 
Sbjct: 31 NKGDFIVLLGPSGSGKSTLLNMIA 54


>gi|197124638|ref|YP_002136589.1| hypothetical protein AnaeK_4257 [Anaeromyxobacter sp. K]
 gi|196174487|gb|ACG75460.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
          Length = 213

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 13/89 (14%)

Query: 94  LCDRFLDSSYAY--QGERDSSQHLFLD-SLQ----EISVQEVMPDCTIILDLPVDIGLKR 146
           + DRF  S+ AY  Q  R      +LD  L+       +    PD T           +R
Sbjct: 92  IVDRFHVSTRAYQLQAGRRDPDFSWLDPRLRVLGFRHVLCVRRPD-TF-----AAARAER 145

Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           ++      +   LD F R+  +     R+
Sbjct: 146 LKISGKPSQYDDLDAFVREQDLFRRLVRE 174


>gi|157145938|ref|YP_001453257.1| hypothetical protein CKO_01691 [Citrobacter koseri ATCC BAA-895]
 gi|157083143|gb|ABV12821.1| hypothetical protein CKO_01691 [Citrobacter koseri ATCC BAA-895]
          Length = 272

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       D+ +  +P G     A R +
Sbjct: 52 VTILGPSGSGKSTLIRLINQLESLSGGDIFIDDKPIGQLKGAALRQL 98


>gi|149194352|ref|ZP_01871449.1| molybdenum transport atp-binding protein [Caminibacter
          mediatlanticus TB-2]
 gi|149135527|gb|EDM24006.1| molybdenum transport atp-binding protein [Caminibacter
          mediatlanticus TB-2]
          Length = 285

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          +  G FI+ +G  G+GKTT + ++    + K   +   +
Sbjct: 25 IKKGEFIAIKGSSGSGKTTLLRIIAGLEKSKGEIIVFDK 63


>gi|308800596|ref|XP_003075079.1| putative deoxyribonucleoside kinase (ISS) [Ostreococcus tauri]
 gi|116061633|emb|CAL52351.1| putative deoxyribonucleoside kinase (ISS) [Ostreococcus tauri]
          Length = 201

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 34/187 (18%)

Query: 8   SFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58
           S EG  G+GK+T +  +      L+     V    EP  +        +E A H LL   
Sbjct: 6   SLEGNIGSGKSTFLKEVVTGGMHLKGLAKAVP---EPVHSWQRIPCGRSEQASHNLLKEF 62

Query: 59  VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKI----LLCDRFLD-SSYAYQGERD 110
                  A      VF    L   E+    +    KI    +  DR +  SS   QG   
Sbjct: 63  YANPEKYAYVFQNYVFMTRFLQERESESSESTNLLKIMERSVFSDRNVFVSSVQEQGWFS 122

Query: 111 SSQHLF------------LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157
             +               ++++ + ++  ++PD  I L +   + +KR++ R    E   
Sbjct: 123 ELELDLYHAWSCPMIRVRVENILQ-ALPCLVPDGFIYLQVAPSVCMKRLRQRARGEEIDV 181

Query: 158 CLDYFER 164
            L+Y E 
Sbjct: 182 TLEYLES 188


>gi|126723788|ref|NP_001075641.1| PAPS synthase 1 [Oryctolagus cuniculus]
 gi|47834978|gb|AAT39124.1| PAPS synthase 1 [Oryctolagus cuniculus]
          Length = 624

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P      +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYALDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|14521315|ref|NP_126790.1| ATPase [Pyrococcus abyssi GE5]
 gi|5458533|emb|CAB50021.1| Hypothetical protein, containing KH nucleic acid binding domain
           [Pyrococcus abyssi GE5]
          Length = 608

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+ ++  G  GAGKTT +  L  +       V    +P     +E  
Sbjct: 267 GILVA--GPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVSEEI 311


>gi|150392222|ref|YP_001322271.1| LAO/AO transport system ATPase [Alkaliphilus metalliredigens QYMF]
 gi|149952084|gb|ABR50612.1| LAO/AO transport system ATPase [Alkaliphilus metalliredigens QYMF]
          Length = 313

 Score = 37.7 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 8/100 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAAR--HVL 54
               I   G  GAGK+T    L + L++KN  V  +  +P     GG    +  R   + 
Sbjct: 42  KARIIGITGPPGAGKSTLTDKLVKILRKKNKTVGIIAVDPTSPFTGGAILGDRIRMSDLY 101

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
              GV          +   +R       I  A     I++
Sbjct: 102 TDPGVFIRSMGTRGHLGGISRATQSAIKILDAYGVDFIII 141


>gi|328951338|ref|YP_004368673.1| Adenylyl-sulfate kinase [Marinithermus hydrothermalis DSM 14884]
 gi|328451662|gb|AEB12563.1| Adenylyl-sulfate kinase [Marinithermus hydrothermalis DSM 14884]
          Length = 185

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          F G+ GAGKTT    +   L+R+ + V
Sbjct: 12 FTGLSGAGKTTLARAIYDELKRRGHRV 38


>gi|302525069|ref|ZP_07277411.1| phosphonate ABC transporter, ATP-binding protein [Streptomyces sp.
           AA4]
 gi|302433964|gb|EFL05780.1| phosphonate ABC transporter, ATP-binding protein [Streptomyces sp.
           AA4]
          Length = 269

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV-LLSCGVDEFG 63
           F    G    GKTT +  L R L+ +   V++  E   +  A E AR + LL        
Sbjct: 37  FTVIVGPNACGKTTLLRALARMLKPRAGSVYLDGEVISSYGAKEVARRLGLLPQSSIAPD 96

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               + + A  R  H + ++R    E   ++ D
Sbjct: 97  GITVSDLVARGRYPH-QKLLRQWSREDATVVAD 128


>gi|254293915|ref|YP_003059938.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Hirschia baltica ATCC 49814]
 gi|254042446|gb|ACT59241.1| sulfate adenylyltransferase, large subunit [Hirschia baltica ATCC
           49814]
          Length = 642

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L+++ L                         LL       G   + 
Sbjct: 478 FTGLSGSGKSTIANLVEKKLFAAGKHTF-----------------LLDGDNVRHGLNRDL 520

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +     G I++                S        ++++  
Sbjct: 521 GFTDADRVENIRRVGEVAKLMTDAGLIVMT------------AFISPFQAERQMVRDLFT 568

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           +       + +D P+++  +R
Sbjct: 569 EGEF--IEVFVDTPLEVAEQR 587


>gi|253574183|ref|ZP_04851525.1| ABC transporter transmembrane region [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251846660|gb|EES74666.1| ABC transporter transmembrane region [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 631

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
             G  I+  G  GAGKTT I+LL RF +     + V     G   AE  R  L S
Sbjct: 409 KQGQMIAIVGPTGAGKTTLINLLMRFYEVNGGSITV----DGVNIAEMRRGDLRS 459


>gi|242067423|ref|XP_002448988.1| hypothetical protein SORBIDRAFT_05g002950 [Sorghum bicolor]
 gi|241934831|gb|EES07976.1| hypothetical protein SORBIDRAFT_05g002950 [Sorghum bicolor]
          Length = 926

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 44/101 (43%), Gaps = 12/101 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEF 62
             IS  G  G GK+T +  +   L+ KN+ V   +   P  + A++  + +L     ++ 
Sbjct: 190 KVISVIGPSGVGKSTLVRDVYETLEIKNHFVEQALATFPPYSSASDILKLILRDLKEED- 248

Query: 63  GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSS 102
                   F  ++++  + ++   L  +  +++ D  + S+
Sbjct: 249 --------FTLSKMEVTKELLDKKLKGKQYLVVIDGEVSST 281


>gi|213022060|ref|ZP_03336507.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 205

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61


>gi|220925702|ref|YP_002501004.1| plasmid partitioning protein RepA [Methylobacterium nodulans ORS
           2060]
 gi|219950309|gb|ACL60701.1| plasmid partitioning protein RepA [Methylobacterium nodulans ORS
           2060]
          Length = 405

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  K Y V                   L     EF  +A   ++AA
Sbjct: 133 GSGKTTTAAHLAQYLALKGYRVLAVDLDPQASLTA------LHGYQPEFDVDANQTLYAA 186

Query: 74  ARLD 77
            R D
Sbjct: 187 IRYD 190


>gi|158312845|ref|YP_001505353.1| superfamily I DNA/RNA helicase [Frankia sp. EAN1pec]
 gi|158108250|gb|ABW10447.1| Superfamily I DNA and RNA helicase and helicase subunits-like
           protein [Frankia sp. EAN1pec]
          Length = 2622

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
           M++G  +  EG  G GKT  I+ L   L  +   V VT + G
Sbjct: 776 MDNG--VVVEGPPGTGKTHTIANLISALLAEGRRVLVTSQKG 815


>gi|116513482|ref|YP_812388.1| ABC-type Mn/Zn transport system, ATPase [Lactobacillus
          delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092797|gb|ABJ57950.1| ABC-type Mn/Zn transport system, ATPase component [Lactobacillus
          delbrueckii subsp. bulgaricus ATCC BAA-365]
          Length = 236

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          ++ G+FI+  G  GAGK+T I+ L
Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47


>gi|28210472|ref|NP_781416.1| cobalt transport ATP-binding protein cbiO [Clostridium tetani E88]
 gi|28202909|gb|AAO35353.1| cobalt transport ATP-binding protein cbiO [Clostridium tetani E88]
          Length = 110

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 13/90 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G FI   G  G GK+T I LL R          V    GGT   E    V ++    E
Sbjct: 34  NEGEFILIVGPSGCGKSTLIRLLNR---------VVPDYYGGTIEGE----VSINGRNIE 80

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           F  + + I        H E  +   + +GK
Sbjct: 81  FLDKKQVIENVGMVYQHPEKQLYFKMWKGK 110


>gi|53714482|ref|YP_100474.1| uridine kinase [Bacteroides fragilis YCH46]
 gi|60682505|ref|YP_212649.1| uridine kinase [Bacteroides fragilis NCTC 9343]
 gi|253564983|ref|ZP_04842439.1| uridine kinase [Bacteroides sp. 3_2_5]
 gi|52217347|dbj|BAD49940.1| uridine kinase [Bacteroides fragilis YCH46]
 gi|60493939|emb|CAH08730.1| putative uridine kinase [Bacteroides fragilis NCTC 9343]
 gi|251946448|gb|EES86825.1| uridine kinase [Bacteroides sp. 3_2_5]
 gi|301163964|emb|CBW23519.1| putative uridine kinase [Bacteroides fragilis 638R]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 2   LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
              +++       HV       L EGK +    +   +   Q E    +   +  ++ I 
Sbjct: 61  FEWSLL-----SKHVA-----LLKEGKCIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 110

Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 ++ +M D  I +D   D  L RV  R  +      +
Sbjct: 111 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVVERGRTAE 151


>gi|326384259|ref|ZP_08205941.1| putative ABC transporter ATP-binding protein [Gordonia
          neofelifaecis NRRL B-59395]
 gi|326197124|gb|EGD54316.1| putative ABC transporter ATP-binding protein [Gordonia
          neofelifaecis NRRL B-59395]
          Length = 238

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVD 60
           G  I+  G  GAGKTT +  L   L R+   V V     P G P +     ++L     
Sbjct: 29 KGEVIALLGPNGAGKTTMLETLAGLLPREAGKVVVGGVELPSGNPRSAVRNGLVLVPDDR 88

Query: 61 EF 62
            
Sbjct: 89 AL 90


>gi|310642744|ref|YP_003947502.1| guanylate kinase, putative [Paenibacillus polymyxa SC2]
 gi|309247694|gb|ADO57261.1| Guanylate kinase, putative [Paenibacillus polymyxa SC2]
          Length = 190

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 15/38 (39%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M  GL     G  G GK T  + L+  L    Y V  T
Sbjct: 1  MAKGLLFVISGPSGVGKGTVGNALREKLPEITYSVSAT 38


>gi|260460590|ref|ZP_05808841.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259033695|gb|EEW34955.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 354

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 58/167 (34%), Gaps = 34/167 (20%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVH----VTR-EPGGTPAAEAARHVLLSC 57
           G F+SF G  G GKTT + ++  F +      V     +TR +P         +   L  
Sbjct: 31  GEFVSFLGPSGCGKTTVLRMVAGFEEPSAGKIVVAGKDITRLKPNQRNVGMVFQAYALFP 90

Query: 58  GVDEFGAEAEAIVFA------AAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109
            +      A  +  A      A R   + ++ +  P +        DR+      YQ   
Sbjct: 91  NLTVAQNIAFGLKVAGMSKADADRRVAEMLDMIKLPQMA-------DRYP-----YQLSG 138

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
              Q + L   + I+     P   ++LD  L       RV  R  +R
Sbjct: 139 GQQQRIALA--RAIA---PKPKL-LLLDEPLSALDAKVRVSLREEIR 179


>gi|258611570|ref|ZP_05233577.2| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          N3-165]
 gi|284801137|ref|YP_003413002.1| hypothetical protein LM5578_0886 [Listeria monocytogenes 08-5578]
 gi|284994279|ref|YP_003416047.1| hypothetical protein LM5923_0841 [Listeria monocytogenes 08-5923]
 gi|258601303|gb|EEW14628.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL
          N3-165]
 gi|284056699|gb|ADB67640.1| hypothetical protein LM5578_0886 [Listeria monocytogenes 08-5578]
 gi|284059746|gb|ADB70685.1| hypothetical protein LM5923_0841 [Listeria monocytogenes 08-5923]
          Length = 366

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60


>gi|239945677|ref|ZP_04697614.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239992146|ref|ZP_04712810.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 11379]
          Length = 276

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 15/76 (19%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--------------- 48
           G F++  G  G GK+T + L+   L   + DV +  E    P  +               
Sbjct: 53  GEFVAIVGPSGCGKSTLLKLVAGLLTASSGDVLLGGERVSGPRHDIGYVFQRAALLEWRS 112

Query: 49  AARHVLLSCGVDEFGA 64
           A R++LL   +     
Sbjct: 113 ALRNILLQAEIRRMEP 128


>gi|238062047|ref|ZP_04606756.1| serine/threonine protein phosphatase [Micromonospora sp. ATCC
           39149]
 gi|237883858|gb|EEP72686.1| serine/threonine protein phosphatase [Micromonospora sp. ATCC
           39149]
          Length = 840

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 48/212 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++  G+ G+GK+T                H    P    +++A R ++     D+  A 
Sbjct: 9   LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDAFRGMVADDENDQ-SAS 53

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A+A       L HV  +    L  G + + D      +A  G    ++            
Sbjct: 54  ADAF----DALHHVAGI---RLRRGLLTVVDATNLQPHARAGLVRVARE----------- 95

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIARNQ 184
            +V+P   I+LD+P  +  +R Q R         L   +R         RQ +  +AR  
Sbjct: 96  HDVLP-VAIVLDVPEAVAWERTQGRADRTHGRQVLARMQRD-------LRQSYGRLAREG 147

Query: 185 PDRCHIVDSAHSFQSV-ATNILNIVWELVQKR 215
             + H++        + A  I     +L+  R
Sbjct: 148 FRKVHVL---RGVDEIDAAEIR--YEKLLNDR 174


>gi|212224855|ref|YP_002308091.1| cysC adenylylsulfate kinase [Thermococcus onnurineus NA1]
 gi|212009812|gb|ACJ17194.1| cysC adenylylsulfate kinase [Thermococcus onnurineus NA1]
          Length = 181

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 15/33 (45%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           G  I   G  GAGKTT    L + L+   Y V
Sbjct: 9  KGFTIWLTGPSGAGKTTLAVKLAKKLREMGYRV 41


>gi|172040476|ref|YP_001800190.1| signal recognition particle protein [Corynebacterium urealyticum
           DSM 7109]
 gi|171851780|emb|CAQ04756.1| signal recognition particle protein [Corynebacterium urealyticum
           DSM 7109]
          Length = 531

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 22/139 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60
           G++GAGKTT    L R+L ++ +   +       P A     ++             G  
Sbjct: 107 GLQGAGKTTLAGKLARYLSKQGHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTS 166

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + E        ++  E  I  A   +  I++ D            R       +  
Sbjct: 167 LESHDHEMGTSTGDPVEVAEKGIEEAYRTQHDIVIID---------TAGRLGIDETLMTQ 217

Query: 120 LQEISVQEVMPD-CTIILD 137
            + I    V PD    ++D
Sbjct: 218 ARNI-RDAVEPDEVLFVID 235


>gi|254369795|ref|ZP_04985805.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. holarctica FSC022]
 gi|157122754|gb|EDO66883.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. holarctica FSC022]
          Length = 343

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R             + E  
Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 202

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + N I  A  +G  +++ D
Sbjct: 203 --GADSASVIYNAIGSAKSKGIDVVIAD 228


>gi|88602884|ref|YP_503062.1| hypothetical protein Mhun_1612 [Methanospirillum hungatei JF-1]
 gi|88188346|gb|ABD41343.1| Polyphosphate:AMP phosphotransferase [Methanospirillum hungatei
           JF-1]
          Length = 498

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 71/226 (31%), Gaps = 44/226 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I  L      + Y V    EP G P              ++     
Sbjct: 303 IVFEGWDAAGKGGCIIRLAESFNPRGYIV----EPIGPP-----------NDWEKMHHYL 347

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERDSSQHLFLDSLQEISV 125
                   R             +G I + DR         + E   S+  +  +  EI+V
Sbjct: 348 WRFYTRFPR-------------KGHITIFDRSWYGRVLVERVEGFCSESEWQRAYHEINV 394

Query: 126 QEVMPDCT--------IILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEKR 173
            E     T          L +  D  L+R + R +  E        D+  R+    +E+ 
Sbjct: 395 MEDE--LTREGTILIKFWLHIDKDEQLRRFEERQNTPEKNWKITEEDWRNREKWDQYERA 452

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
               +           I+ + + + +    +L  V   +QKR+  +
Sbjct: 453 VNAMIRRTTTIQAPWTIIPANNKYYA-RIAVLETVRSAMQKRLKEM 497


>gi|114321492|ref|YP_743175.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227886|gb|ABI57685.1| adenylylsulfate kinase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 638

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L++ L +  Y                    LL       G   + 
Sbjct: 470 FTGLSGSGKSTLSNALEQRLYQLGYH-----------------SYLLDGDNIRHGLNGDL 512

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V R  +  G +++         A+     + + +  + +++   
Sbjct: 513 GFSREDRVENIRRIGEVARLFVDAGLLVVT--------AFISPFRADRAMVRELVED--- 561

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E +    I +D P+++  +R
Sbjct: 562 GEFVE---IFVDTPLEVCEQR 579


>gi|125776096|ref|XP_001359167.1| GA19345 [Drosophila pseudoobscura pseudoobscura]
 gi|54638909|gb|EAL28311.1| GA19345 [Drosophila pseudoobscura pseudoobscura]
          Length = 249

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 57/216 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T  S +             T       A +  R      G +          
Sbjct: 66  GGPGAGKGTQCSKIVNRF-------LFT----HLSAGDLLREERTREGSE---------- 104

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125
                     ++I   +  GKI+   +      S      +        +D     + ++
Sbjct: 105 --------FGSLIEDYIRNGKIVPVEI----TCSLLENAMKNSGKSLFLIDGFPRNQDNL 152

Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                 M D       +  D   ++ +KR   R         D  E       +KR Q +
Sbjct: 153 DGWNRQMSDKVDVQFVLFFDCDEEVCVKRCLIRGQGGSGRSDDNLES-----LKKRIQTY 207

Query: 178 LD----IAR--NQPDRCHIVDSAHSFQSVATNILNI 207
            +    I +  +   +   +D++     V   +   
Sbjct: 208 NNDSMPIIKYFDDAGQVKRIDASPDADQVFREVERT 243


>gi|326921364|ref|XP_003206930.1| PREDICTED: guanylate kinase-like [Meleagris gallopavo]
          Length = 198

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 75/222 (33%), Gaps = 39/222 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M     +   G  GAGK+T I  L K +     + V H TR+P          H +    
Sbjct: 1   MQGPRPVVLSGPSGAGKSTLIKKLFKDYENIFGFSVSHTTRQPRPGEVNGKDYHFV---T 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            +E   E +A              I  A   G +     +  S  A Q  +  +Q   LD
Sbjct: 58  REEMKKEIDA-----------GEFIEHAEFSGNM-----YGTSKRAVQAVQAKNQICILD 101

Query: 119 SLQEISVQEVMPDCT-IILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
              +        D   I + +     D+  KR+++R +  E +         V       
Sbjct: 102 IDIQGVKNIKKTDLNPIYISVQPPSIDVLEKRLRDRQTETEESLQKRLTAARVD------ 155

Query: 175 QIFLDIARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQK 214
              L++++ +P      I++     +   + +   + + +QK
Sbjct: 156 ---LELSK-EPGLFDLVIIN--DDLEKAYSELKEQLLKEIQK 191


>gi|325661118|ref|ZP_08149745.1| hypothetical protein HMPREF0490_00478 [Lachnospiraceae bacterium
          4_1_37FAA]
 gi|325472625|gb|EGC75836.1| hypothetical protein HMPREF0490_00478 [Lachnospiraceae bacterium
          4_1_37FAA]
          Length = 255

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
            G FI+  G  G GK+T +SL+   LQ
Sbjct: 32 KKGEFIAIVGPSGCGKSTLLSLIAGLLQ 59


>gi|323466254|gb|ADX69941.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 168

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 42/150 (28%), Gaps = 32/150 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
               I   G  G+GKTT    + + L R    +     P  T   E     +        
Sbjct: 2   KPKLIIIRGNSGSGKTTLAKEIHQRLPRNTLLI-----PQDTVRREMLN--VKDGENTLA 54

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               E ++       H    I   ++  K             Y      +Q LF D +  
Sbjct: 55  LPLLENLLEYGYT--HCSYTILEGILNAKW------------YSELFRKAQQLFGDQIYA 100

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
                         D+P +  ++R + R+ 
Sbjct: 101 Y-----------YFDIPFEETMRRHKERHE 119


>gi|310722454|ref|YP_003969278.1| DNA helicase [Aeromonas phage phiAS4]
 gi|306021297|gb|ADM79832.1| DNA helicase [Aeromonas phage phiAS4]
          Length = 438

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 21/54 (38%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          M +   I+  G  G+GKTT    L   L +      V   P      E ++H L
Sbjct: 22 MRTKRHITIRGPAGSGKTTMTRFLLERLFQTGQQGIVLTAPTHQAKKELSKHAL 75


>gi|302864688|ref|YP_003833325.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Micromonospora
           aurantiaca ATCC 27029]
 gi|302567547|gb|ADL43749.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Micromonospora
           aurantiaca ATCC 27029]
          Length = 838

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 48/196 (24%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            ++  G+ G+GK+T                H    P    +++  R ++     D+  A 
Sbjct: 11  LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDTFRGLVADDENDQ-SAS 55

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A+A       L HV  +    L  G + + D      +A  G    ++            
Sbjct: 56  ADAF----DALHHVAAI---RLRRGLLTVVDATNLQPHARAGLIRVARE----------- 97

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIARNQ 184
            +V+P   I+LD+P  +  +R + R         L+   R+D+      RQ +  +AR  
Sbjct: 98  HDVLP-VAIVLDVPEAVAWERTEARADRTHGRQVLNRM-RRDL------RQSYGRLAREG 149

Query: 185 PDRCHI------VDSA 194
             + H+      +D+A
Sbjct: 150 FRKVHVLRGVDEIDAA 165


>gi|225864914|ref|YP_002750292.1| hypothetical protein BCA_3021 [Bacillus cereus 03BB102]
 gi|225790829|gb|ACO31046.1| hypothetical protein BCA_3021 [Bacillus cereus 03BB102]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39


>gi|167750833|ref|ZP_02422960.1| hypothetical protein EUBSIR_01816 [Eubacterium siraeum DSM 15702]
 gi|167656268|gb|EDS00398.1| hypothetical protein EUBSIR_01816 [Eubacterium siraeum DSM 15702]
 gi|291530590|emb|CBK96175.1| guanylate kinase [Eubacterium siraeum 70/3]
          Length = 209

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 66/214 (30%), Gaps = 39/214 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           MN GL I      G GK T +  L +        V   TR          + H   +   
Sbjct: 9   MNKGLPIVISAPSGCGKDTILEQLYKKNSNLTQSVSATTRAMREGEIDGVSYHFTTTDAF 68

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++  A  E +    +        +  +   L +G+ ++                    L 
Sbjct: 69  EKMIANGEVLEYTQYCGNYYGTPKKAVTDMLEQGRDVI--------------------LK 108

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           ++    ++++++ P+C +I  LP       +R++ R +  E        +          
Sbjct: 109 IEVEGAMNIKKIFPECVLIFILPPSMSELERRLRKRGTETEETIAARIAQARNE------ 162

Query: 175 QIFLDIARNQPDRCHIVDS--AHSFQSVATNILN 206
              L  A        +V+     +   V T IL 
Sbjct: 163 ---LQFADKFD--YLVVNGELEKAVDDVNTVILA 191


>gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806]
          Length = 190

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 42/202 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-EAEAIVFA 72
           G+GK+T   LL R LQ + +D  +  E     A +  R +    G   F   E + +   
Sbjct: 22  GSGKSTLGELLSRRLQYRFFDTDILIE---RVAGKKIREIFADEGEATFRELETQVLAEL 78

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
           ++                K ++                      ++         +M   
Sbjct: 79  SSLT--------------KTVI------------ATGGGMVLKPINW--SYLRHGLM--- 107

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            I LD+P+++ +KR++   S       D   + ++++ ++       +      R  + D
Sbjct: 108 -IWLDVPLEVLVKRLKQDTSRPLLESTDLESKLELLLEQR-----RGLYAEADLRIFVSD 161

Query: 193 SAHSFQSVATNILNIVWELVQK 214
              +   +   IL  +  +++ 
Sbjct: 162 -LDTPADIVEKILTAIPTVIKD 182


>gi|116872183|ref|YP_848964.1| spermidine/putrescine ABC transporter ATP- binding protein
          [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123466107|sp|A0AGP9|POTA_LISW6 RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|116741061|emb|CAK20181.1| spermidine/putrescine ABC transporter ATP-binding protein
          [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 366

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
           G F +  G  G GKTT + L+  FL+ 
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60


>gi|41408582|ref|NP_961418.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396940|gb|AAS04801.1| CysN [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 616

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 20/95 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  + F G+ G+GK++   L+++ L  K    +                 +L       
Sbjct: 444 RGKTVWFTGLSGSGKSSVAMLVEQKLLEKGAQAY-----------------VLDGDNLRH 486

Query: 63  GAEAEAIVFAAARLDHVENVIRPA--LME-GKILL 94
           G  A+     A R +++  +   A  L + G ++L
Sbjct: 487 GLNADLGFSMADRAENLRRLAHVAALLADCGNVVL 521


>gi|110634009|ref|YP_674217.1| adenylate kinase [Mesorhizobium sp. BNC1]
 gi|123057917|sp|Q11HS3|KAD_MESSB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|110284993|gb|ABG63052.1| Adenylate kinase [Chelativorans sp. BNC1]
          Length = 194

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 27/208 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGAEAEAI 69
           G  GAGK T   +L   L       H+ +   G     A +    +           E +
Sbjct: 7   GPPGAGKGTQAQILVEKL-------HIPQLSTGDMLRAAVKAETEIGKKAKAVMDAGELV 59

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             A       E + +P    G   + D +          R  +Q   ++++  +  + + 
Sbjct: 60  SDAIVNAIVAERIDQPDCANGF--ILDGY---------PRTLAQADAVEAM--LGERGLK 106

Query: 130 PDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
            D  I L +     + R+  R    + +      +    +  E+ R+ +   A       
Sbjct: 107 LDAVIELVVDDKALVGRIMKRAEDAQAAGQPVRRDDNPEVFEERLREYYKKTAPLVGYYY 166

Query: 189 HI-----VDSAHSFQSVATNILNIVWEL 211
                  VD   S   V   I  I+ + 
Sbjct: 167 AKGLLKGVDGMASIDEVTRQIEGILAKA 194


>gi|325684784|gb|EGD26937.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 236

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          ++ G+FI+  G  GAGK+T I+ L
Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47


>gi|315642493|ref|ZP_07897011.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus italicus DSM 15952]
 gi|315482266|gb|EFU72826.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus italicus DSM 15952]
          Length = 184

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N G  I F G  G+GK+T + L+   L
Sbjct: 53 NKGEVIVFSGPSGSGKSTLLKLIGTLL 79


>gi|300871840|ref|YP_003786713.1| hypothetical protein BP951000_2239 [Brachyspira pilosicoli
          95/1000]
 gi|300689541|gb|ADK32212.1| hypothetical protein BP951000_2239 [Brachyspira pilosicoli
          95/1000]
          Length = 49

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 3/32 (9%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          IS +G  GAGK+T   L+ + L    Y    T
Sbjct: 10 ISLDGPSGAGKSTVAKLVAKKL---GYKYLDT 38


>gi|294341799|emb|CAZ90228.1| putative ABC-type transport system, ATPase component [Thiomonas sp.
           3As]
          Length = 282

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLL 55
            G  +S  G  G GK+T I+++   L     ++       RE       +  R  LL
Sbjct: 59  RGKIVSIFGPNGCGKSTLINMIAGLLPVDGGEILFDGKSLRETVIGYVFQNYREALL 115


>gi|194099661|ref|YP_002002796.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           NCCP11945]
 gi|240015638|ref|ZP_04722178.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           FA6140]
 gi|240114036|ref|ZP_04728526.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           MS11]
 gi|268600099|ref|ZP_06134266.1| signal recognition particle protein [Neisseria gonorrhoeae MS11]
 gi|193934951|gb|ACF30775.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           NCCP11945]
 gi|268584230|gb|EEZ48906.1| signal recognition particle protein [Neisseria gonorrhoeae MS11]
 gi|317165145|gb|ADV08686.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 417

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|193806345|sp|P12115|KAD1_CYPCA RecName: Full=Adenylate kinase isoenzyme 1; Short=AK 1; AltName:
           Full=ATP-AMP transphosphorylase 1; AltName:
           Full=Myokinase
          Length = 194

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 38/213 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+   G  G+GK T    +                     + +  R  + S        +
Sbjct: 12  FVV--GGPGSGKGTQCEKIVEK-----------YGYTHLSSGDLLRAEVASGSERGKQLQ 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A         LD V ++I+ A++    +    +L   Y             +   +E   
Sbjct: 59  AIMQKGELVPLDTVLDMIKDAMIAKADV-SKGYLIDGY----------PREVKQGEEFEK 107

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEK----RRQIFL 178
           +   P   + +D   +  ++R+  R     S   D  E   +K + ++ K        + 
Sbjct: 108 KIGAPALLLYIDAKAETMVQRLMKRGQT--SGRSDDNEETIKKRLDLYYKATEPVIAYYE 165

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                       ++S      V   ++  + EL
Sbjct: 166 TR-----GIVRKINSELPVDEVFAIVVKAIDEL 193


>gi|145634347|ref|ZP_01790057.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittAA]
 gi|229844195|ref|ZP_04464336.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 6P18H1]
 gi|145268327|gb|EDK08321.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittAA]
 gi|229813189|gb|EEP48877.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 6P18H1]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|121714775|ref|XP_001274997.1| cell cycle checkpoint protein rad17 [Aspergillus clavatus NRRL 1]
 gi|119403153|gb|EAW13571.1| cell cycle checkpoint protein rad17 [Aspergillus clavatus NRRL 1]
          Length = 770

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL 28
           MN+   +   G  G+GKTT ISLL  FL
Sbjct: 177 MNAKKLLVLRGPAGSGKTTTISLLSDFL 204


>gi|157826674|ref|YP_001495738.1| Signal recognition particle protein [Rickettsia bellii OSU 85-389]
 gi|157801978|gb|ABV78701.1| Signal recognition particle protein [Rickettsia bellii OSU 85-389]
          Length = 449

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT    L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASGKLALCLKNQNKKVLLVSLDTYRPAAQEQLEIL 152


>gi|260061063|ref|YP_003194143.1| guanylate kinase [Robiginitalea biformata HTCC2501]
 gi|88785195|gb|EAR16364.1| guanylate kinase [Robiginitalea biformata HTCC2501]
          Length = 216

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 36/150 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G  I F    G+GKTT +  L   L++ N ++  +      P               
Sbjct: 1   MAGGKLIVFSAPSGSGKTTIVRHL---LEQPNLNLAFSVSATSRPR-----------RPK 46

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   E    +  +    H++N       E               Y+     +    ++ L
Sbjct: 47  EKHGEHYYFMTVSEFKQHIKNGDFLEWEE--------------VYRDNFYGTLKSEVERL 92

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150
                        +I D+ V  GL R++ +
Sbjct: 93  WAEGKN-------VIFDIDVAGGL-RIKKK 114


>gi|331085124|ref|ZP_08334210.1| hypothetical protein HMPREF0987_00513 [Lachnospiraceae bacterium
          9_1_43BFAA]
 gi|330407907|gb|EGG87397.1| hypothetical protein HMPREF0987_00513 [Lachnospiraceae bacterium
          9_1_43BFAA]
          Length = 255

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
            G FI+  G  G GK+T +SL+   LQ
Sbjct: 32 KKGEFIAIVGPSGCGKSTLLSLIAGLLQ 59


>gi|324507533|gb|ADY43194.1| Cytoplasmic dynein 2 heavy chain 1 [Ascaris suum]
          Length = 627

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 29/126 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M   + +   G  G GK+T   +LKR L   N  V   T  P      +         G 
Sbjct: 446 MRQRMGVVLVGPSGCGKSTLWKMLKRALAIVNKPVTTYTINPKAISRTKLL-------GY 498

Query: 60  DEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            +         ++ AAAR      V++ +      ++CD                   ++
Sbjct: 499 MDLDTREWFDGVLTAAAR-----EVVKDS-SVDAWIVCD-------------GDIDPEWV 539

Query: 118 DSLQEI 123
           ++L  +
Sbjct: 540 EALNSV 545


>gi|291449135|ref|ZP_06588525.1| ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL
           15998]
 gi|291352082|gb|EFE78986.1| ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL
           15998]
          Length = 274

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 15/76 (19%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--------------- 48
           G F++  G  G GK+T + L+   L   + DV +  E    P  +               
Sbjct: 51  GEFVAIVGPSGCGKSTLLKLVAGLLTASSGDVLLGGERVSGPRHDIGYVFQRAALLEWRS 110

Query: 49  AARHVLLSCGVDEFGA 64
           A R++LL   +     
Sbjct: 111 ALRNILLQAEIRRMEP 126


>gi|281356109|ref|ZP_06242602.1| signal recognition particle protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281317478|gb|EFB01499.1| signal recognition particle protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 485

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 16/136 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT    L   L+R    V +       PAA     ++         AE  ++ 
Sbjct: 106 GLHGSGKTTTAGKLALKLKRDGKKVLLVAGDVYRPAAIDQLEIIGKEISVPVHAERTSVN 165

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
            AA  ++ VE     A  +G  +++ D            R       +  L  I  Q V 
Sbjct: 166 VAAIAVNAVEQ----AGRQGFDVVIID---------TAGRLQIDETMVQELVRI-RQAVQ 211

Query: 130 PDCTIILDLPVDIGLK 145
           PD  ++L     +G +
Sbjct: 212 PD-EVLLVADAALGQE 226


>gi|229030999|ref|ZP_04187015.1| hypothetical protein bcere0028_30580 [Bacillus cereus AH1271]
 gi|228730346|gb|EEL81310.1| hypothetical protein bcere0028_30580 [Bacillus cereus AH1271]
          Length = 289

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
            I  EG+ G GK+T  SLL   L  KN D  +  E
Sbjct: 10 KLIIVEGLPGFGKSTTASLLYDILIEKNIDAELFLE 45


>gi|224025707|ref|ZP_03644073.1| hypothetical protein BACCOPRO_02448 [Bacteroides coprophilus DSM
          18228]
 gi|224018943|gb|EEF76941.1| hypothetical protein BACCOPRO_02448 [Bacteroides coprophilus DSM
          18228]
          Length = 460

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
          N G F++  G  G GKTT + L+ 
Sbjct: 32 NKGEFVTILGPSGCGKTTLLRLIA 55


>gi|163737018|ref|ZP_02144436.1| hypothetical protein RGBS107_02708 [Phaeobacter gallaeciensis
           BS107]
 gi|161389622|gb|EDQ13973.1| hypothetical protein RGBS107_02708 [Phaeobacter gallaeciensis
           BS107]
          Length = 214

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 27/178 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDE 61
             ++  G  G+GK+T   LL R L  +     V    G             +      + 
Sbjct: 27  RLVALAGAPGSGKSTLAELLVRALCAQGTSAAVVPMDGFHLDNRLLSEMDLLARKGAPES 86

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           F       + AA  ++  E VI P          DR  D   A  G       + +  ++
Sbjct: 87  FDQPGFLRLIAAMAVE--EEVIYPEF--------DRARD--IAIAGAARVDAGVEVAVVE 134

Query: 122 EISVQEVMP---------DCTIILDLPVDIGLKRVQNR---YSLRESACLDYFERKDV 167
              +    P         D ++ +D+P DI  +R+  R   Y L ++   +  E  D+
Sbjct: 135 GNYLMFDAPGWRDLAALWDVSVRVDVPRDILRERLVARWQAYGLSDAEAEERAEGNDL 192


>gi|157376092|ref|YP_001474692.1| adenylyl-sulfate kinase [Shewanella sediminis HAW-EB3]
 gi|157318466|gb|ABV37564.1| Adenylyl-sulfate kinase [Shewanella sediminis HAW-EB3]
          Length = 228

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 35/144 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L       +                 +L       G   + 
Sbjct: 54  FTGLSGSGKSTVANAVDKMLHDLGCKTY-----------------VLDGDNVRHGLNGDL 96

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE--- 122
               A R++++     V +  +  G ++        S A+       +      L +   
Sbjct: 97  GFSDADRVENIRRIGEVSKLFVDAGLLV--------STAFISPFVEDRESVRAQLSDSQH 148

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146
            + Q +     + +D P+++  +R
Sbjct: 149 SNSQFIE----VYIDTPIEVCEQR 168


>gi|311746104|ref|ZP_07719889.1| signal recognition particle protein [Algoriphagus sp. PR1]
 gi|126576323|gb|EAZ80601.1| signal recognition particle protein [Algoriphagus sp. PR1]
          Length = 444

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
             G++G+GKTT    L   L+++   V +       PAA     VL     ++ G E  A
Sbjct: 104 ISGLQGSGKTTFSGKLASLLKKQGRQVLLVACDIYRPAAIDQLKVL----GEQVGVEVYA 159

Query: 69  IVFAAARLDHVENVIRPALMEG-KILLCD 96
                  L+   N I  A   G K ++ D
Sbjct: 160 EPENKNALEIANNAIAYAKKSGKKTVIVD 188


>gi|220929212|ref|YP_002506121.1| guanylate kinase [Clostridium cellulolyticum H10]
 gi|219999540|gb|ACL76141.1| guanylate kinase [Clostridium cellulolyticum H10]
          Length = 201

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 32/171 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL +   G  G GK T    L        Y V   TR+P        +   +      
Sbjct: 3   QKGLLVVVSGPSGTGKGTVCKKLLSQRDNVRYSVSATTRKPREGEIEGQSYFFVSESKFL 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +               D +    +          CD +  +  +Y    DSS    +D +
Sbjct: 63  DMIKN-----------DALIEWDKY---------CDNYYGTPKSY---VDSSMESGMDII 99

Query: 121 QEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            EI+V+  +      PD  +I  LP     + ++ R   R + C D  E++
Sbjct: 100 LEITVEGALEIKQKYPDSVLIFILPP--SFEELRRRIECRATECTDVIEKR 148


>gi|124805382|ref|XP_001350424.1| XPA binding protein 1, putative [Plasmodium falciparum 3D7]
 gi|23496546|gb|AAN36104.1|AE014844_15 XPA binding protein 1, putative [Plasmodium falciparum 3D7]
          Length = 497

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 13/102 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54
           I   G+ G+GKTT++  L  +L+ +             V   + P      ++ +   ++
Sbjct: 211 IVI-GMAGSGKTTYVGSLYNYLKVEQKKKVYTMNLDPAVKYVQYPLNIDIRDSIKYHEIM 269

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +   GA    +   A R D V  ++     +   ++ D
Sbjct: 270 KEYKLGPNGAIMTCLNLFATRFDKVIEILEKRKSKLHYIIVD 311


>gi|59802367|ref|YP_209079.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           FA 1090]
 gi|59719262|gb|AAW90667.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           FA 1090]
          Length = 421

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 283

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 284 -TGDSAAVCFDAVQAAKARGIDIVLAD 309


>gi|13507794|ref|NP_109743.1| spermidine/putrescine transport ATP-binding prot [Mycoplasma
          pneumoniae M129]
 gi|2492551|sp|P75059|POTA_MYCPN RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|1673754|gb|AAB95747.1| spermidine/putrescine transport ATP-binding prot [Mycoplasma
          pneumoniae M129]
 gi|301633292|gb|ADK86846.1| ABC transporter, ATP-binding protein [Mycoplasma pneumoniae FH]
          Length = 560

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI+  G  G GKTT + LL 
Sbjct: 30 IKKGEFITILGPSGCGKTTTLRLLA 54


>gi|327313920|ref|YP_004329357.1| dephospho-CoA kinase [Prevotella denticola F0289]
 gi|326945418|gb|AEA21303.1| dephospho-CoA kinase [Prevotella denticola F0289]
          Length = 187

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 29/171 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------VTREPGGTPAAEAARHVL 54
           + ++  G  G+GK+    LL      +  +V+           T  P      E     +
Sbjct: 1   MIVALTGGIGSGKSYVCRLLAE----RGIEVYDCDAHAKELMRTSPPLRQQLKELVGDSV 56

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
              G+ +    AE ++ +      V  VI PA      + CD F  S  ++         
Sbjct: 57  FRDGILQKSVLAEFLLRSDRHTQAVNAVIHPA------VACD-FEQSGLSWLESAILFDS 109

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            F              D  + +  P ++ ++RV  R  +     L++  R+
Sbjct: 110 GFDRRTHI--------DKVVCVTAPAEVRIRRVMERDGISREKALEWMARQ 152


>gi|326385130|ref|ZP_08206799.1| LuxR family transcriptional regulator [Gordonia neofelifaecis
          NRRL B-59395]
 gi|326196163|gb|EGD53368.1| LuxR family transcriptional regulator [Gordonia neofelifaecis
          NRRL B-59395]
          Length = 856

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 22/71 (30%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
          FI      G GK+T +  L   L+ +   V    E       + A  VLL    D     
Sbjct: 29 FILITAPSGGGKSTVLRRLSETLRGRGVRVAGGAEHDPASLFDGAPAVLLIDDADRSDPN 88

Query: 66 AEAIVFAAARL 76
              +   A  
Sbjct: 89 TLHRLHELADA 99


>gi|308494915|ref|XP_003109646.1| hypothetical protein CRE_07487 [Caenorhabditis remanei]
 gi|308245836|gb|EFO89788.1| hypothetical protein CRE_07487 [Caenorhabditis remanei]
          Length = 210

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 41/219 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62
            FI   G  G+GK T               +          + +  R  + S      + 
Sbjct: 23  FFIV--GGPGSGKGTQCD-----------KIVAKYGLTHLSSGDLLRDEVKSGSPRGSQL 69

Query: 63  GAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            A  E  A+V     LD V+  +  A+ +G       FL   Y  +  +       +   
Sbjct: 70  TAIMESGALVPLEVVLDLVKEAMLKAIEKG----SKGFLIDGYPREVAQGQQFESEIQEA 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQ 175
           +            +  D+  D  +KR+ +R   S R    +D  +++             
Sbjct: 126 K----------LVLFFDVAEDTLVKRLLHRAQTSGRADDNIDTIKKRLHTFVTSTAPVVD 175

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +         +   +++  S   +   ++  + ++  K
Sbjct: 176 YY-----ESKGKLVRINAEGSVDDIFGVVVANLDKVTSK 209


>gi|298708560|emb|CBJ30645.1| SRP101, alpha subunit of the signal recognition particle receptor
           [Ectocarpus siliculosus]
          Length = 589

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI G GK+T ++ +  +L+     V +      T  + A   + + C   +     +   
Sbjct: 390 GINGVGKSTSLAKVAYYLKENGIKVLIAA--CDTFRSGAVEQLRVHCRCLDVPLFEKG-- 445

Query: 71  FAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
           +A          ++ A  EG   +L D            R  +    + +L ++ + E  
Sbjct: 446 YARDSSAVAREAVKHAAEEGYDCVLID---------TAGRMQNNEPLMRALSKL-INENE 495

Query: 130 PDCTII 135
           P+  + 
Sbjct: 496 PELVLF 501


>gi|268317894|ref|YP_003291613.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252]
 gi|262335428|gb|ACY49225.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252]
          Length = 217

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 32/197 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GK++   +L  + +   ++    R       A+    +        +    
Sbjct: 13  IAIAGNIGSGKSSLTKVLSEYFK---WEAVYERVDDNPYLADFYNDM------RRWSFNL 63

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFLDS 119
           +    ++          R        ++ DR +      +A      G      +    +
Sbjct: 64  QIFFLSSRFRQQ-----RQIEASPHSVVQDRSIYEDAEIFARNLYEMGLMSQRDYENYVA 118

Query: 120 LQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           L EI    +  P   I L   V   ++ +Q R    E+A     E       E+  + + 
Sbjct: 119 LFEIMTSFLKPPHLLIYLRASVPTLVRHIQARGRPYETAI--RIE-----YLERLNRHYE 171

Query: 179 DIARNQ---PDRCHIVD 192
           D        P     VD
Sbjct: 172 DWIARYDLGPKMIIDVD 188


>gi|228986251|ref|ZP_04146390.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228773450|gb|EEM21877.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 219

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--GVDE 61
           I   GI G   AGKTT  + L   L +   +   T       +++  +H ++      + 
Sbjct: 20  IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +  A    A  L  +E  I+  +  G     D +   ++ Y   +  S    +  ++
Sbjct: 77  HRYKMTACHPVAHHLAALERDIQ-MVRAG----LDFYTIDTH-YMKSKLISSENKVTIVE 130

Query: 122 EISVQEVMPDC---TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +S   + PD     I      +  L R  +R      A ++Y  +     HE+RR  + 
Sbjct: 131 GMSAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGANINYLRQS----HEERRIQYE 186

Query: 179 DIARNQPDRCHIV 191
               +   R  I+
Sbjct: 187 VFMHSYSQRFDII 199


>gi|221475826|ref|NP_001036369.3| beethoven [Drosophila melanogaster]
 gi|220902063|gb|ABI31323.3| beethoven [Drosophila melanogaster]
          Length = 4236

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 24/117 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G GK+T ISLLK+ L      VH       +      R   L     ++    
Sbjct: 1948 VVLVGPPGCGKSTIISLLKQALCGTQLKVHTISPKSMSRIQLLGR---LDADTRQWQDGV 2004

Query: 67   EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                  A   +  +            ++CD              S    ++++L  +
Sbjct: 2005 LTHTAVAVNQESSQV--------HSWIVCD-------------GSIDPEWIEALNSV 2040


>gi|254372909|ref|ZP_04988398.1| cytidylate kinase [Francisella tularensis subsp. novicida
          GA99-3549]
 gi|151570636|gb|EDN36290.1| cytidylate kinase [Francisella novicida GA99-3549]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          MN+   I+ +G  G GK T    L ++
Sbjct: 1  MNNSKIITIDGPSGVGKGTLAKALAKY 27


>gi|145632910|ref|ZP_01788643.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 3655]
 gi|144986566|gb|EDJ93132.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 3655]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|116255014|ref|YP_770849.1| putative crown gall tumour-like protein [Rhizobium leguminosarum
          bv. viciae 3841]
 gi|115259662|emb|CAK11646.1| putative crown gall tumour-like protein [Rhizobium leguminosarum
          bv. viciae 3841]
          Length = 231

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 5  LFIS---FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            I+   F+G  GAGKTT +  L  +L  K   V +       P  +   + L +   D 
Sbjct: 2  KLITCCSFKG--GAGKTTALMGLCSWLASKKRRVALFEGDENRPLTKWKENALRNGAWDH 59

Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKI 92
               +  VF A  L  +E+  + A   G  
Sbjct: 60 -----QCEVFVADELPLLEDAYQQAEGAGFH 85


>gi|91205962|ref|YP_538317.1| Signal recognition particle protein [Rickettsia bellii RML369-C]
 gi|122990889|sp|Q1RHD6|SRP54_RICBR RecName: Full=Signal recognition particle protein; AltName:
           Full=Fifty-four homolog
 gi|91069506|gb|ABE05228.1| Signal recognition particle protein [Rickettsia bellii RML369-C]
          Length = 449

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT    L   L+ +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASGKLALCLKNQNKKVLLVSLDTYRPAAQEQLEIL 152


>gi|83766400|dbj|BAE56543.1| unnamed protein product [Aspergillus oryzae]
          Length = 672

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 27/163 (16%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  GAGK+T +  L   +     + V H TR P   P  +  R    +   D    
Sbjct: 484 VVVSGPSGAGKSTLLKRLFADYPDTFGFSVSHTTRAP--RPGEQHGREYYFTTKADFLDL 541

Query: 65  EA-----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     E   F           ++    +G+I + D           E +  + +    
Sbjct: 542 VSKNGFIEHAQFGGNHYGTSVQAVKDIAKKGRICILD----------IEMEGVKQVKRTD 591

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           L    +    P         V+   +R++ R +  E +     
Sbjct: 592 LNARFMFLAPP--------SVEELERRLRGRGTESEESLSKRL 626


>gi|325578152|ref|ZP_08148287.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Haemophilus parainfluenzae
          ATCC 33392]
 gi|325159888|gb|EGC72017.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Haemophilus parainfluenzae
          ATCC 33392]
          Length = 400

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 61 INNGEFVTILGPSGCGKTTVLRLLA 85


>gi|300858399|ref|YP_003783382.1| cytidylate kinase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685853|gb|ADK28775.1| Cytidylate kinase [Corynebacterium pseudotuberculosis FRC41]
 gi|302206112|gb|ADL10454.1| cytidylate kinase [Corynebacterium pseudotuberculosis C231]
 gi|302330666|gb|ADL20860.1| cytidylate kinase [Corynebacterium pseudotuberculosis 1002]
 gi|308276350|gb|ADO26249.1| cytidylate kinase [Corynebacterium pseudotuberculosis I19]
          Length = 238

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          +GL ++ +G  GAGK+T    +   L  K  D
Sbjct: 11 NGLIVAIDGPSGAGKSTVCRAIAAELGAKYLD 42


>gi|237786348|ref|YP_002907053.1| adenylate kinase [Corynebacterium kroppenstedtii DSM 44385]
 gi|259493994|sp|C4LL05|KAD_CORK4 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|237759260|gb|ACR18510.1| adenylate kinase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 184

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 39/211 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK T  ++L   L         T         +  R  +      E G EA+
Sbjct: 4   VLLGPPGAGKGTQAAILSDKL---GVPHVST--------GDLFRENI--GNNTELGQEAK 50

Query: 68  AIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           + + A   +      N+++  L +      D FL   +    E+       LD L     
Sbjct: 51  SYIDAGKLVPTSVTVNMVKDRLSQDDA--ADGFLLDGFPRTVEQGDELKNILDGL----- 103

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLD----I 180
                D  +  D+  D+ ++R+  R    ++  +            + R +++ D    +
Sbjct: 104 -GTKLDAVLQFDVSEDVVVERMLARGRADDTEEV-----------IRTRLKVYRDETAPL 151

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                D    + +  S + +    +  +  L
Sbjct: 152 LEYYKDSIIRIVAEGSVEDINERTMEALKAL 182


>gi|190014726|ref|YP_001967490.1| RepA' [Agrobacterium tumefaciens]
 gi|71849529|gb|AAZ50477.1| RepA' [Agrobacterium tumefaciens]
          Length = 405

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  + Y V           +           + E    A   ++AA
Sbjct: 132 GSGKTTTSAHLSQYLALQGYRVLTVDLDPQASLSALL------GVLPESDIRANETLYAA 185

Query: 74  ARLDH----VENVIRPALMEGKILL 94
            R D     + +VIRP   +G  L+
Sbjct: 186 IRYDETRRPLRDVIRPTYFDGLHLV 210


>gi|17533985|ref|NP_496515.1| yeast DNA helicase/endonuclease family member (dna-2)
           [Caenorhabditis elegans]
 gi|3877086|emb|CAA90399.1| C. elegans protein F43G6.1a, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 1105

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           F+  EG+ G+GKTT IS+L + L   N  V +   
Sbjct: 703 FMMVEGLPGSGKTTLISVLIQCLVATNKKVLLAAF 737


>gi|17533987|ref|NP_496516.1| yeast DNA helicase/endonuclease family member (dna-2)
           [Caenorhabditis elegans]
 gi|5824500|emb|CAB54253.1| C. elegans protein F43G6.1b, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 1069

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           F+  EG+ G+GKTT IS+L + L   N  V +   
Sbjct: 667 FMMVEGLPGSGKTTLISVLIQCLVATNKKVLLAAF 701


>gi|25090938|sp|Q27128|PAPSS_URECA RecName: Full=Bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase; Short=PAPS synthase; Short=PAPSS; AltName:
           Full=Sulfurylase kinase; Short=SK; Includes: RecName:
           Full=Sulfate adenylyltransferase; AltName:
           Full=ATP-sulfurylase; AltName: Full=Sulfate adenylate
           transferase; Short=SAT; Includes: RecName:
           Full=Adenylyl-sulfate kinase; AltName:
           Full=3'-phosphoadenosine-5'-phosphosulfate synthase;
           AltName: Full=APS kinase; AltName:
           Full=Adenosine-5'-phosphosulfate 3'-phosphotransferase;
           AltName: Full=Adenylylsulfate 3'-phosphotransferase
 gi|705385|gb|AAB00139.1| PAPS synthetase [Urechis caupo]
          Length = 610

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 19/87 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGKTT    L+ +L  +         P  +   +  R           G   E 
Sbjct: 42  FTGLSGAGKTTISFALEEYLVSQGI-------PTYSLDGDNVR----HGLNKNLGFTQE- 89

Query: 69  IVFAAARLDHVENVIRPA--LMEGKIL 93
                 R +++  +   A    +G I+
Sbjct: 90  -----DREENIRRISEVAKLFADGGIV 111


>gi|322368080|ref|ZP_08042649.1| ABC transporter related protein [Haladaptatus paucihalophilus
           DX253]
 gi|320552096|gb|EFW93741.1| ABC transporter related protein [Haladaptatus paucihalophilus
           DX253]
          Length = 327

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 44/228 (19%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLLS 56
           G F  F G  GAGKTT I  L   L+          YDV    E         A+   + 
Sbjct: 31  GEFFGFLGPNGAGKTTTIRTLVTLLRPTDGSVTVNGYDVGDDPESVRRSVGYMAQETSID 90

Query: 57  CGVDEFGAEAEAIVFAAA-------RLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGE 108
              +E  A       AAA       R +  + ++  A L++    + D+   +       
Sbjct: 91  ---EELTARENVEYMAAAYGIPKSERAERADELLNLADLLD----VADKSAKT------- 136

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168
                   LD++  +          + LD     GL              ++    +   
Sbjct: 137 FSGGMKKRLDAVTALVHHPP----VVFLD-EPTTGLDPKARNRLWDYFREINR---EGTT 188

Query: 169 IHEKRRQIFLDIARNQPDRCHIV-DS----AHSFQSVATNILNIVWEL 211
           +    +  +L+ A    DR  ++ D       S   +   +   + EL
Sbjct: 189 VFLTTQ--YLEEADQLCDRISLIKDGEIALTGSPDELKNEVGGDILEL 234


>gi|300118788|ref|ZP_07056509.1| hypothetical protein BCSJ1_17760 [Bacillus cereus SJ1]
 gi|298723817|gb|EFI64538.1| hypothetical protein BCSJ1_17760 [Bacillus cereus SJ1]
          Length = 284

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          MN+   I  EG+ G GK+T   L+   L +   +V
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINDILSQNKIEV 34


>gi|289668556|ref|ZP_06489631.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 652

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 487 FTGLSGAGKSTVANLVDKRLHSLGYHTF-----------------ILDGDNVRHGLNRDL 529

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 530 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 583

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 584 --------VFVDVPLAVAEAR 596


>gi|254671754|emb|CBA09584.1| cell division protein [Neisseria meningitidis alpha153]
          Length = 421

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD 309


>gi|296128296|ref|YP_003635546.1| uridine kinase [Cellulomonas flavigena DSM 20109]
 gi|296020111|gb|ADG73347.1| uridine kinase [Cellulomonas flavigena DSM 20109]
          Length = 207

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 41/188 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRK---------NYDVHVTREPGGTPAAE-----AAR 51
            ++ +G+  +GKTT  + L R +  +          ++V   R   G  +AE     A  
Sbjct: 21  LVAIDGVGASGKTTLATALARHITTRPVLVLHVDDFFNVAAVRHARGRTSAEGFWLDAIN 80

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCDRFLDSSYAYQG 107
              L   +D   AE E  ++ AA +DH      +  R A     ++L           +G
Sbjct: 81  TSALRSALDHLSAEGEG-LYRAASIDHRSGRSWDPPRQAAAPRALVLV----------EG 129

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKD 166
                  L               D ++ LD+  D   +R+  R  L  +   L+ +E   
Sbjct: 130 VFLHRDELVDYW-----------DFSVWLDVAPDEAARRMVQRDGLDPDDPRLERYEGAQ 178

Query: 167 VMIHEKRR 174
            +  E+ R
Sbjct: 179 RLYVERAR 186


>gi|237729400|ref|ZP_04559881.1| dephospho-CoA kinase [Citrobacter sp. 30_2]
 gi|226909129|gb|EEH95047.1| dephospho-CoA kinase [Citrobacter sp. 30_2]
          Length = 206

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 37/83 (44%), Gaps = 12/83 (14%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  +++D+  +  L+R   R  +           + ++  +  R+  L +A +      +
Sbjct: 125 DRVLVVDVTPETQLRRTMQRDDVTREHV------EQILAAQATREARLAVADD------V 172

Query: 191 VDSAHSFQSVATNILNIVWELVQ 213
           +D+  + +++A+++  +    +Q
Sbjct: 173 IDNNGAPEAIASDVARLHALYLQ 195


>gi|224419058|ref|ZP_03657064.1| signal recognition particle protein [Helicobacter canadensis MIT
           98-5491]
 gi|253827998|ref|ZP_04870883.1| cell division protein ftsY [Helicobacter canadensis MIT 98-5491]
 gi|313142566|ref|ZP_07804759.1| signal recognition particle protein [Helicobacter canadensis MIT
           98-5491]
 gi|253511404|gb|EES90063.1| cell division protein ftsY [Helicobacter canadensis MIT 98-5491]
 gi|313131597|gb|EFR49214.1| signal recognition particle protein [Helicobacter canadensis MIT
           98-5491]
          Length = 295

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            I   G+ GAGKTT I+ L    +++   V +    G T  A A   + L   
Sbjct: 92  LIV--GVNGAGKTTTIAKLANRYKKQGKSVIL--GAGDTFRAAAIEQLTLWGN 140


>gi|167393494|ref|XP_001740599.1| UMP-CMP kinase [Entamoeba dispar SAW760]
 gi|165895234|gb|EDR22972.1| UMP-CMP kinase, putative [Entamoeba dispar SAW760]
          Length = 210

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 59/206 (28%), Gaps = 43/206 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T    +        L   +     V RE  G+   +  + ++    +     
Sbjct: 21  GGPGAGKGTQCQKIVNKYPITHLSAGDLLRAEVKRE--GSQNGQLIQTLIKEGKIVPAAV 78

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++ A    +H            K+ + D F             ++  +     +++
Sbjct: 79  TVELLLNAIRNDEH------------KVFIIDGF--------PRNAENKEAWFLQANKVN 118

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY------SLRESACLDYFERKDVMIHEKRRQIFL 178
           +        + +D+  +  + R+  R          + + +  F    +       + F 
Sbjct: 119 IDTA---LCVFIDVSEETMINRIHKRSVNSGRVDDNDDSLMKRFRTYKLETLP-VIESF- 173

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204
                  ++   +    S   +   I
Sbjct: 174 ----ENENKLLRISGEGSVDDIFNKI 195


>gi|148825887|ref|YP_001290640.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittEE]
 gi|229846801|ref|ZP_04466908.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 7P49H1]
 gi|148716047|gb|ABQ98257.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittEE]
 gi|229810290|gb|EEP46009.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 7P49H1]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|134103240|ref|YP_001108901.1| adenylate kinase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915863|emb|CAM05976.1| adenylate kinase [Saccharopolyspora erythraea NRRL 2338]
          Length = 184

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 39/206 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  GAGK T  ++L   L   +    D+        TP  E A+  L +  +       E
Sbjct: 8   GPPGAGKGTQAAVLSEQLSVPHISSGDLFRYHIGNNTPLGEEAKRYLDAGELVPDEITNE 67

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            ++         E +  P   EG   L D F          R+++Q   L   + ++ + 
Sbjct: 68  MVL---------ERLAEPDAAEGF--LLDGF---------PRNTAQADVLA--RSLAEKG 105

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IARN 183
                 +  D+P +  +KR+  R    ++            +  +R Q++      +   
Sbjct: 106 TELTAVLEFDVPEEELVKRLLGRGRADDTE----------DVIRRRLQVYGSETAPLLNY 155

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
             D+   +D+  S + +    L  + 
Sbjct: 156 YRDKLIRIDAVGSVEDITERALKALR 181


>gi|126465672|ref|YP_001040781.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Staphylothermus marinus F1]
 gi|171769996|sp|A3DML3|SRP54_STAMF RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|126014495|gb|ABN69873.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Staphylothermus marinus F1]
          Length = 441

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 16/136 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L  + + + Y V +       PAA       L    ++ G       
Sbjct: 104 GLQGSGKTTTAAKLAYYYKLEGYRVGLVAADTYRPAAYDQ----LKQLGEQIGVPVYGEP 159

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                ++     +   +  G  I++ D            R   +   L  ++EI+ + + 
Sbjct: 160 DNKDAVEIARRGVEYFVSRGFDIVIVD---------TAGRHHREEDLLREMREIA-ENIK 209

Query: 130 PDCTIILDLPVDIGLK 145
           PD  +++ +   IG +
Sbjct: 210 PDEVVLV-IDAAIGQQ 224


>gi|89256356|ref|YP_513718.1| cytidylate kinase [Francisella tularensis subsp. holarctica LVS]
 gi|115314801|ref|YP_763524.1| cytidylate kinase [Francisella tularensis subsp. holarctica
          OSU18]
 gi|254367693|ref|ZP_04983714.1| cytidylate kinase [Francisella tularensis subsp. holarctica 257]
 gi|254369330|ref|ZP_04985342.1| cytidylate kinase [Francisella tularensis subsp. holarctica
          FSC022]
 gi|290954168|ref|ZP_06558789.1| cytidylate kinase [Francisella tularensis subsp. holarctica
          URFT1]
 gi|295312411|ref|ZP_06803189.1| cytidylate kinase [Francisella tularensis subsp. holarctica
          URFT1]
 gi|89144187|emb|CAJ79456.1| cytidylate kinase [Francisella tularensis subsp. holarctica LVS]
 gi|115129700|gb|ABI82887.1| cytidylate kinase [Francisella tularensis subsp. holarctica
          OSU18]
 gi|134253504|gb|EBA52598.1| cytidylate kinase [Francisella tularensis subsp. holarctica 257]
 gi|157122280|gb|EDO66420.1| cytidylate kinase [Francisella tularensis subsp. holarctica
          FSC022]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          MN+   I+ +G  G GK T    L ++
Sbjct: 1  MNNSKIITIDGPSGVGKGTLAKALAKY 27


>gi|327399601|ref|YP_004340470.1| signal recognition particle protein [Hippea maritima DSM 10411]
 gi|327182230|gb|AEA34411.1| signal recognition particle protein [Hippea maritima DSM 10411]
          Length = 441

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 17/136 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69
           G++G+GKTT  + L +FL+ K     +       PAA     +L     +D F  E    
Sbjct: 106 GLQGSGKTTTAAKLAKFLRSKGRQPLLVACDIYRPAAIKQLQILGKQINIDVFSKE---- 161

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
              +   D  +  +  A   GK ++    +D+       R       ++ L+ I  Q++ 
Sbjct: 162 --NSKPEDIAKEALNYAKQNGKNVII---IDT-----AGRLHIDDELMEELERI-KQKIE 210

Query: 130 PDCTIILDLPVDIGLK 145
           PD  I+      IG +
Sbjct: 211 PD-EILFVADAMIGQE 225


>gi|315226534|ref|ZP_07868322.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Parascardovia denticolens DSM 10105]
 gi|315120666|gb|EFT83798.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Parascardovia denticolens DSM 10105]
          Length = 588

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
             G FI+F G  GAGKTT +  L   ++ +    +  + +  G P ++      LS    
Sbjct: 348 KKGEFIAFVGRNGAGKTTLLKCLSGAVKPQAGSMIFKSGQSRGKPISQTIDLSQLSPK-- 405

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK 91
               ++E + F     +H E  +R  L  G+
Sbjct: 406 ---KKSEIMSFMVQDYNHFEFTVRENLSLGR 433


>gi|309973029|gb|ADO96230.1| Spermidine/putrescine ABC transporter, ATP-binding protein
          [Haemophilus influenzae R2846]
          Length = 382

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 43 INNGEFVTILGPSGCGKTTVLRLLA 67


>gi|296157697|ref|ZP_06840531.1| adenylylsulfate kinase [Burkholderia sp. Ch1-1]
 gi|295891943|gb|EFG71727.1| adenylylsulfate kinase [Burkholderia sp. Ch1-1]
          Length = 179

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 14/85 (16%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGK+T  + L   L+   +   V          +  R  L +          E + 
Sbjct: 13 GLSGAGKSTLANALHLRLKEAGHAAIVL-------DGDVLRRGLNADLGFTPEDRTENL- 64

Query: 71 FAAARLDHVENVIRPALMEGKILLC 95
              R+ HV  +    + +G +++ 
Sbjct: 65 ---RRVAHVAAL---FMQQGFVVIA 83


>gi|293397906|ref|ZP_06642112.1| signal recognition particle receptor [Neisseria gonorrhoeae F62]
 gi|291611852|gb|EFF40921.1| signal recognition particle receptor [Neisseria gonorrhoeae F62]
          Length = 421

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +     G     AAR  L + G  E         
Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD 309


>gi|289665102|ref|ZP_06486683.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 643

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 478 FTGLSGAGKSTVANLVDKRLHSLGYHTF-----------------ILDGDNVRHGLNRDL 520

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 521 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 574

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 575 --------VFVDVPLAVAEAR 587


>gi|283780894|ref|YP_003371649.1| guanylate kinase [Pirellula staleyi DSM 6068]
 gi|283439347|gb|ADB17789.1| guanylate kinase [Pirellula staleyi DSM 6068]
          Length = 200

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 29/181 (16%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRF-LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           G  +   G  GAGK+T +  +L +  L  +      TR+P          H L       
Sbjct: 13  GYLVVISGPSGAGKSTVVHEVLAKCPLPLELSVSATTRKPRPGEVDGVHYHFLSHDEFRT 72

Query: 62  FGAEAEAI----VFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              + E +    VF        ++N +   L  GK +L               +      
Sbjct: 73  RREQGEFLECKEVFGRGDWYGTLQNTVSTGLAAGKWVLL--------------EIDVEGM 118

Query: 117 LDSLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKR 173
           L  LQ+    E     TI +    ++   +R++ R +  E +     E  R+++      
Sbjct: 119 LAVLQKFPQAE-----TIFIHSGSIEELERRLRQRNTETEDSLARRLEVARRELTFLSHY 173

Query: 174 R 174
           R
Sbjct: 174 R 174


>gi|300777052|ref|ZP_07086910.1| deoxynucleoside kinase [Chryseobacterium gleum ATCC 35910]
 gi|300502562|gb|EFK33702.1| deoxynucleoside kinase [Chryseobacterium gleum ATCC 35910]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 63/190 (33%), Gaps = 33/190 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT  ++L +                     +   +  L     +    +
Sbjct: 3   IAVTGNIGAGKTTLTTMLSKH------------YGWDAQFEDVDHNPYLEDFYSDMSKWS 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
            A+   F  +R   V+ +       GK ++ DR  + D+    +   D +     D    
Sbjct: 51  FALQVYFLGSRFRQVKEI----RESGKNIIQDRTIYEDAHIFAENLNDMNLLSDRDFNNY 106

Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            SV ++M      PD  I L   V   +K++  R    E++         +    K  Q 
Sbjct: 107 SSVFDLMKSFVSAPDLLIYLKSDVPNLVKKIYKRGREYEASI-------SIEYLSKLNQK 159

Query: 177 FLDIARNQPD 186
           +     N  +
Sbjct: 160 YEKWISNYTE 169


>gi|187931813|ref|YP_001891798.1| cytidylate kinase [Francisella tularensis subsp. mediasiatica
          FSC147]
 gi|187712722|gb|ACD31019.1| cytidylate kinase [Francisella tularensis subsp. mediasiatica
          FSC147]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          MN+   I+ +G  G GK T    L ++
Sbjct: 1  MNNSKIITIDGPSGVGKGTLAKALAKY 27


>gi|167627247|ref|YP_001677747.1| signal recognition particle-docking protein FtsY [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|167597248|gb|ABZ87246.1| signal recognition particle-docking protein FtsY [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 333

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 9/93 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGA 64
            I   G+ G GKTT I  L + LQ +   V +        AA E  R         +   
Sbjct: 131 LIV--GVNGVGKTTTIGKLTKKLQSEGKSVILAAGDTFRAAAVEQLREW-GDRNNTQVVY 187

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96
           + E     A     + + I  A   G  +++ D
Sbjct: 188 QKE----GADSASVIYDAISSAKSRGIDVVIAD 216


>gi|166713195|ref|ZP_02244402.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 658

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 590 --------VFVDVPLAVAESR 602


>gi|157737135|ref|YP_001489818.1| signal recognition particle-docking GTPase FtsY [Arcobacter
           butzleri RM4018]
 gi|315636844|ref|ZP_07892069.1| cell division protein FtsY [Arcobacter butzleri JV22]
 gi|157698989|gb|ABV67149.1| signal recognition particle-docking GTPase FtsY [Arcobacter
           butzleri RM4018]
 gi|315478898|gb|EFU69606.1| cell division protein FtsY [Arcobacter butzleri JV22]
          Length = 309

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I+ L   L+++   V +
Sbjct: 109 GVNGAGKTTTIAKLANKLKKEGKSVIL 135


>gi|145636052|ref|ZP_01791722.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittHH]
 gi|319776371|ref|YP_004138859.1| polyamine transporter subunit [Haemophilus influenzae F3047]
 gi|319897002|ref|YP_004135197.1| polyamine transporter subunit [Haemophilus influenzae F3031]
 gi|145270574|gb|EDK10507.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittHH]
 gi|317432506|emb|CBY80864.1| polyamine transporter subunit [Haemophilus influenzae F3031]
 gi|317450962|emb|CBY87189.1| polyamine transporter subunit [Haemophilus influenzae F3047]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|104773488|ref|YP_618468.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
          subsp. bulgaricus ATCC 11842]
 gi|103422569|emb|CAI97170.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
          subsp. bulgaricus ATCC 11842]
          Length = 236

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          ++ G+FI+  G  GAGK+T I+ L
Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47


>gi|89072808|ref|ZP_01159365.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Photobacterium sp. SKA34]
 gi|89051330|gb|EAR56785.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Photobacterium sp. SKA34]
          Length = 257

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI F G  G GKTT +  + 
Sbjct: 27 INKGEFICFLGPSGCGKTTLLRAIA 51


>gi|89895080|ref|YP_518567.1| hypothetical protein DSY2334 [Desulfitobacterium hafniense Y51]
 gi|219669492|ref|YP_002459927.1| ABC transporter [Desulfitobacterium hafniense DCB-2]
 gi|89334528|dbj|BAE84123.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539752|gb|ACL21491.1| ABC transporter related [Desulfitobacterium hafniense DCB-2]
          Length = 224

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G F++ EG  G GK+T + ++   L+    DV +  E 
Sbjct: 31 KGDFLAIEGPSGTGKSTLLYIMCGLLRPTGGDVFLKDEN 69


>gi|332184708|gb|AEE26962.1| Signal recognition particle receptor protein FtsY (alpha subunit)
           [Francisella cf. novicida 3523]
          Length = 331

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R         +   + E  
Sbjct: 134 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTQVVYQHE-- 190

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 191 --GADSASVIYDAISSAKSKGIGVVIAD 216


>gi|322831405|ref|YP_004211432.1| adenylylsulfate kinase [Rahnella sp. Y9602]
 gi|321166606|gb|ADW72305.1| adenylylsulfate kinase [Rahnella sp. Y9602]
          Length = 207

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 39  FTGLSGSGKSTVAGALEQALYAQGVSTY-----------------LLDGDNVRHGLCRDL 81

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R +++     V +  +  G+++L         A+     + + +  D L++   
Sbjct: 82  GFTDDDRRENIRRVGEVAKLMVDAGQVVLT--------AFISPHRAEREMVRDLLED--G 131

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           Q +     + +D P+ I   R
Sbjct: 132 QFIE----VFVDTPLAICEAR 148


>gi|313501087|gb|ADR62453.1| Signal recognition particle-docking protein FtsY [Pseudomonas
           putida BIRD-1]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 175 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 230

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 231 TGADSASVIFDAVQAAKARGVDVLIAD 257


>gi|291007968|ref|ZP_06565941.1| adenylate kinase [Saccharopolyspora erythraea NRRL 2338]
          Length = 183

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 39/206 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  GAGK T  ++L   L   +    D+        TP  E A+  L +  +       E
Sbjct: 7   GPPGAGKGTQAAVLSEQLSVPHISSGDLFRYHIGNNTPLGEEAKRYLDAGELVPDEITNE 66

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            ++         E +  P   EG   L D F          R+++Q   L   + ++ + 
Sbjct: 67  MVL---------ERLAEPDAAEGF--LLDGF---------PRNTAQADVLA--RSLAEKG 104

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IARN 183
                 +  D+P +  +KR+  R    ++            +  +R Q++      +   
Sbjct: 105 TELTAVLEFDVPEEELVKRLLGRGRADDTE----------DVIRRRLQVYGSETAPLLNY 154

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
             D+   +D+  S + +    L  + 
Sbjct: 155 YRDKLIRIDAVGSVEDITERALKALR 180


>gi|268324530|emb|CBH38118.1| putative Na(+) ABC transporter, ATP-binding protein [uncultured
          archaeon]
          Length = 216

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 27/53 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++ G F++F G  GAGKTT + ++   +   +  V +  +     ++E  R +
Sbjct: 30 ISKGEFVAFSGHNGAGKTTLLKIIATHISPSSGTVKIFGDDAFKSSSEIRRRI 82


>gi|260401166|gb|ACX37109.1| ATP-binding cassette protein subfamily B member 2 [Toxoplasma gondii]
          Length = 1407

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF--LQ-RKNYDVHVTREPGGTPAAEAARHVLL 55
            M  G  ++  G  G GK+T + LL+RF  L+     +   + +P G   A+A R V L
Sbjct: 1154 MKPGETVALVGASGCGKSTVVQLLERFYDLENSSGVETGASSDPSGPRTADATREVEL 1211


>gi|260582676|ref|ZP_05850464.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Haemophilus influenzae NT127]
 gi|260094242|gb|EEW78142.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Haemophilus influenzae NT127]
 gi|309751016|gb|ADO81000.1| Spermidine/putrescine ABC transporter, ATP-binding protein
          [Haemophilus influenzae R2866]
          Length = 382

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 43 INNGEFVTILGPSGCGKTTVLRLLA 67


>gi|256024429|ref|ZP_05438294.1| hypothetical protein E4_13724 [Escherichia sp. 4_1_40B]
          Length = 232

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L       H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++     +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFHKMLCKN-QQGYLLITDRY 121


>gi|228908930|ref|ZP_04072760.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis IBL 200]
 gi|228850652|gb|EEM95476.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis IBL 200]
          Length = 219

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 27/196 (13%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +   +   T       +++  +H ++        
Sbjct: 20  IVI-GISGHGAAGKTTFTNRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76

Query: 64  AEAEAIVFAAAR--LDHVENVIRPALMEGKILL---CDRFLDSSYAYQGERDSSQHLFLD 118
              +     A      H+      AL     ++    D +   ++ Y   +  S    + 
Sbjct: 77  HRYK---MTACHPAAHHLA-----ALERDIHMVRAGLDFYTIDTH-YMKSKLISSENKVT 127

Query: 119 SLQEISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            ++ +S   + P   D  I      +  L R  +R      A ++Y ++     HE+RR 
Sbjct: 128 IVEGMSAAFIDPDLFDLKIYFYTDGETELIRRSSRDIAERGADINYLKQS----HEERRI 183

Query: 176 IFLDIARNQPDRCHIV 191
            +     +   R  I+
Sbjct: 184 QYEVFMHSYSQRFDII 199


>gi|116753543|ref|YP_842661.1| ATPase [Methanosaeta thermophila PT]
 gi|116664994|gb|ABK14021.1| ATPase, PilT family [Methanosaeta thermophila PT]
          Length = 602

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
             G+ I+  G  G+GK+T  + +  +L + NY V     P  
Sbjct: 262 QRGILIA--GPPGSGKSTLAAGIAEYLLKCNYVVKTMESPRD 301


>gi|113475046|ref|YP_721107.1| ABC transporter-like protein [Trichodesmium erythraeum IMS101]
 gi|110166094|gb|ABG50634.1| ABC transporter related [Trichodesmium erythraeum IMS101]
          Length = 252

 Score = 37.7 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 12/67 (17%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF-----------LQRKNYD-VHVTREPGGTPAAE 48
          +N G F++  G  G GK+T + L+ +            + +K ++   V +EP   P ++
Sbjct: 30 INQGEFLTIVGPSGCGKSTVLRLIAKLSDVTSGKIESNINQKKHELAFVFQEPALMPWSQ 89

Query: 49 AARHVLL 55
             +V L
Sbjct: 90 VIDNVYL 96


>gi|323332803|gb|EGA74208.1| Ura6p [Saccharomyces cerevisiae AWRI796]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 44/214 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L +      L      +   ++  G+   E  ++ +      +   +
Sbjct: 23  GGPGAGKGTQCEKLVKDYSFVHLSA-GDLLRAEQDRAGSQYGELIKNCIKEG---QIVPQ 78

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSS-YAYQGERDSSQHLFLDSLQEI 123
              +         + N I   +   K   L D F      A   ERD  +  F+      
Sbjct: 79  EITL-------ALLRNAISDNIKANKHKFLIDGFPRKMDQAISFERDIVESKFI------ 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFL 178
                     +  D P DI L+R+  R   S R    ++  +++     E      + F 
Sbjct: 126 ----------LFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFE 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                   +   V    S + V  ++ + + + +
Sbjct: 176 T-----KSKVVRVRCDRSVEDVYKDVQDAIRDRL 204


>gi|317031026|ref|XP_001392653.2| ATP-binding cassette transporter [Aspergillus niger CBS 513.88]
          Length = 1227

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 15/94 (15%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            +G FI+  G  G+GK++ I+LL+RF   +   + +   P      ++ R  L     +  
Sbjct: 1011 AGAFIALVGATGSGKSSVINLLERFYTGETGAIALDDMPIEQYNLDSYRGYLALVDQNPC 1070

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                            +   +   L  G++++ D
Sbjct: 1071 ---------------LIGETLSDCLQSGELVVLD 1089


>gi|300868320|ref|ZP_07112947.1| adenylylsulfate kinase [Oscillatoria sp. PCC 6506]
 gi|298106343|gb|ADI56269.1| adenylyl-sulfate kinase [Oscillatoria sp. PCC 6506]
 gi|300333672|emb|CBN58131.1| adenylylsulfate kinase [Oscillatoria sp. PCC 6506]
          Length = 175

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M    FI  F G+ G+GKTT    ++  L+ +   V
Sbjct: 1  MTKKGFILWFTGLSGSGKTTISKAVEPELKARGCKV 36


>gi|256822161|ref|YP_003146124.1| adenylylsulfate kinase [Kangiella koreensis DSM 16069]
 gi|256795700|gb|ACV26356.1| adenylylsulfate kinase [Kangiella koreensis DSM 16069]
          Length = 198

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++  L +                       LL       G   + 
Sbjct: 30  FTGLSGSGKSTVANAVESLLFQNGNH-----------------SYLLDGDNVRHGLNQDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +     G I+L         A+     + +    D   E   
Sbjct: 73  SFSEEDRVENIRRIGEVTKLFADSGLIVLS--------AFISPFQADRQQVRDLHNE--- 121

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            +      + +D P+++  +R
Sbjct: 122 GDF---IEVFVDTPLEVCEQR 139


>gi|227494566|ref|ZP_03924882.1| adenylate kinase [Actinomyces coleocanis DSM 15436]
 gi|226832300|gb|EEH64683.1| adenylate kinase [Actinomyces coleocanis DSM 15436]
          Length = 201

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 35/214 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  GAGK T    + +FL   +               E  +         EF  +
Sbjct: 10  LVLILGAPGAGKGTQAERIAQFLNVPSISTGAIFRQNIKEETELGKRANEFISKGEFVPD 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDSLQEI 123
           +      AARL+       P +  G   L D +  +     Y  +  +S+   +D + EI
Sbjct: 70  SVTNPMVAARLEA------PDVDNGC--LLDGYPRTVEQAHYLRDALASKGKEIDLVLEI 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
              +             +  + R+  R  +   A     + ++V+ H    +++ ++   
Sbjct: 122 VTNQ-------------EEVIARLLKRAEIEHRAD----DNEEVIRHRM--EVYREMTEP 162

Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                   D+   VD   +   V   I   + + 
Sbjct: 163 MATYYADQDKLVQVDGMGTIDEVWARIEKALLDA 196


>gi|240013197|ref|ZP_04720110.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           DGI18]
 gi|240081753|ref|ZP_04726296.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           FA19]
 gi|240114730|ref|ZP_04728792.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           PID18]
 gi|240116929|ref|ZP_04730991.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           PID1]
 gi|240120269|ref|ZP_04733231.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           PID24-1]
 gi|240122570|ref|ZP_04735526.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           PID332]
 gi|254492789|ref|ZP_05105960.1| signal recognition particle protein [Neisseria gonorrhoeae 1291]
 gi|260441459|ref|ZP_05795275.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           DGI2]
 gi|268597852|ref|ZP_06132019.1| signal recognition particle protein [Neisseria gonorrhoeae FA19]
 gi|268600381|ref|ZP_06134548.1| signal recognition particle protein [Neisseria gonorrhoeae PID18]
 gi|268602610|ref|ZP_06136777.1| signal recognition particle protein [Neisseria gonorrhoeae PID1]
 gi|268681160|ref|ZP_06148022.1| signal recognition particle protein [Neisseria gonorrhoeae PID332]
 gi|291044820|ref|ZP_06570529.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|226511829|gb|EEH61174.1| signal recognition particle protein [Neisseria gonorrhoeae 1291]
 gi|268551640|gb|EEZ46659.1| signal recognition particle protein [Neisseria gonorrhoeae FA19]
 gi|268584512|gb|EEZ49188.1| signal recognition particle protein [Neisseria gonorrhoeae PID18]
 gi|268586741|gb|EEZ51417.1| signal recognition particle protein [Neisseria gonorrhoeae PID1]
 gi|268621444|gb|EEZ53844.1| signal recognition particle protein [Neisseria gonorrhoeae PID332]
 gi|291011714|gb|EFE03710.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 417

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305


>gi|219114526|ref|XP_002176433.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402679|gb|EEC42669.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 322

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 14/71 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK---NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           LFI+  G  G+GK+T    + + +  +      V +    G   + E+ R +        
Sbjct: 112 LFIAVAGGPGSGKSTLCEKVAQRVNARLEPGIAVVLP-MDGFHYSRESLRKM-------- 162

Query: 62  FGAEAEAIVFA 72
             AE EA V+ 
Sbjct: 163 --AETEACVYT 171


>gi|212224583|ref|YP_002307819.1| hypothetical protein TON_1432 [Thermococcus onnurineus NA1]
 gi|212009540|gb|ACJ16922.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 448

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 61/191 (31%), Gaps = 26/191 (13%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   Y V   R P   P  +  + V+      E   + E  +   
Sbjct: 134 GCGKSQTSRKVAQILQEMGYKVVAIRHP--MPYGDLRKQVVQRFASYEDLDKHECTIEE- 190

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV---MP 130
                      P +  G ++       +   Y+     ++      L +    +     P
Sbjct: 191 ------REEYEPYIDRGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFYEP 238

Query: 131 DCTIILDLPVDIGLKRV----QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
           D  I++  P   G +      +  +   +   ++  +  +    +K R+    I +  P+
Sbjct: 239 DLWIVVTDPHRPGHELKYHPGETNFRAADVIIINKIDTANRDDIQKVRE---SIEKVNPN 295

Query: 187 RCHIVDSAHSF 197
              ++D A   
Sbjct: 296 AI-VIDGASPL 305


>gi|156932988|ref|YP_001436904.1| hypothetical protein ESA_00791 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531242|gb|ABU76068.1| hypothetical protein ESA_00791 [Cronobacter sakazakii ATCC BAA-894]
          Length = 263

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHV-LLSCGVDE 61
           G F +  G  G GK+T +  L R ++     V +  +        E AR + LL+     
Sbjct: 32  GKFTAIIGPNGCGKSTLLRTLSRLMKPLGGQVRLDGQAIQHFATKEVARRIGLLAQNASA 91

Query: 62  FGAEAEAIVFAAARLDHV----------ENVIRPALME-GKILLCDRFLDS 101
            G    A + A  R  H           E  ++ A+   G   L D+ +D+
Sbjct: 92  PGDITVAELVARGRYPHQPLFTRWRDEDERAVQKAMAATGVTALADQSVDT 142


>gi|126232401|gb|ABN95811.1| ATP-binding cassette protein subfamily B member 2 [Toxoplasma gondii]
 gi|221486161|gb|EEE24431.1| multidrug resistance protein / ABC transporter, putative [Toxoplasma
            gondii GT1]
          Length = 1407

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF--LQ-RKNYDVHVTREPGGTPAAEAARHVLL 55
            M  G  ++  G  G GK+T + LL+RF  L+     +   + +P G   A+A R V L
Sbjct: 1154 MKPGETVALVGASGCGKSTVVQLLERFYDLENSSGVETGASSDPSGPRTADATREVEL 1211


>gi|83648117|ref|YP_436552.1| hemin ABC transporter ATPase [Hahella chejuensis KCTC 2396]
 gi|119370734|sp|Q2SB47|HMUV_HAHCH RecName: Full=Hemin import ATP-binding protein HmuV
 gi|83636160|gb|ABC32127.1| ABC-type hemin transport system, ATPase component [Hahella
           chejuensis KCTC 2396]
          Length = 256

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCG 58
           +N G  +   G  GAGK+T +  L   L   +  V +  EP    +      R  +LS  
Sbjct: 24  LNPGELVVTLGPNGAGKSTLLKTLAGDLPPSHGHVLLDDEPISQFSLSQLSRRRAVLSQS 83

Query: 59  VDEFGAEA--EAIVFAAAR 75
           V      +  E ++  A R
Sbjct: 84  VHLDFPFSAMEVVLMGAQR 102


>gi|237834513|ref|XP_002366554.1| ATP-binding cassette protein subfamily B member 2 [Toxoplasma gondii
            ME49]
 gi|69957947|gb|AAZ04383.1| ATP-binding cassette protein subfamily B member 2 [Toxoplasma gondii]
 gi|126232403|gb|ABN95812.1| ATP-binding cassette protein subfamily B member 2 [Toxoplasma gondii]
 gi|126232405|gb|ABN95813.1| ATP-binding cassette protein subfamily B member 2 [Toxoplasma gondii]
 gi|207525234|gb|ACI24159.1| ATP-binding cassette sub-family B member 2 [Toxoplasma gondii]
 gi|211964218|gb|EEA99413.1| ATP-binding cassette protein subfamily B member 2 [Toxoplasma gondii
            ME49]
 gi|221503658|gb|EEE29349.1| multidrug resistance protein / ABC transporter, putative [Toxoplasma
            gondii VEG]
          Length = 1407

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF--LQ-RKNYDVHVTREPGGTPAAEAARHVLL 55
            M  G  ++  G  G GK+T + LL+RF  L+     +   + +P G   A+A R V L
Sbjct: 1154 MKPGETVALVGASGCGKSTVVQLLERFYDLENSSGVETGASSDPSGPRTADATREVEL 1211


>gi|68250138|ref|YP_249250.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 86-028NP]
 gi|68058337|gb|AAX88590.1| spermidine/putrescine transport ATP-binding protein [Haemophilus
          influenzae 86-028NP]
          Length = 381

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 42 INNGEFVTILGPSGCGKTTVLRLLA 66


>gi|329123529|ref|ZP_08252092.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Haemophilus aegyptius ATCC
          11116]
 gi|327470345|gb|EGF15803.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Haemophilus aegyptius ATCC
          11116]
          Length = 381

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 42 INNGEFVTILGPSGCGKTTVLRLLA 66


>gi|323965657|gb|EGB61111.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli
           M863]
          Length = 187

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  +        +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174


>gi|315633934|ref|ZP_07889223.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Aggregatibacter segnis ATCC
          33393]
 gi|315477184|gb|EFU67927.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Aggregatibacter segnis ATCC
          33393]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|240127274|ref|ZP_04739935.1| putative signal recognition particle protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268685639|ref|ZP_06152501.1| signal recognition particle protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268625923|gb|EEZ58323.1| signal recognition particle protein [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 402

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 209 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 264

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 265 -TGDSAAVCFDAVQAAKARGIDIVLAD 290


>gi|326440256|ref|ZP_08214990.1| dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064]
          Length = 180

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
             + P  D  I++D   +  L+R+     + ES              +  R+    IA  
Sbjct: 99  NGLAPRYDLVIVVDAAPETQLERLVELRGMDESEARARMAA------QATREQRRAIAD- 151

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 ++D+  S + +A  + ++  EL ++
Sbjct: 152 -----VVIDNDGSREQLAAQVESVWAELARR 177


>gi|77457804|ref|YP_347309.1| cytochrome c biogenesis protein CcmA [Pseudomonas fluorescens
           Pf0-1]
 gi|122063274|sp|Q3KFY6|CCMA_PSEPF RecName: Full=Cytochrome c biogenesis ATP-binding export protein
           CcmA; AltName: Full=Heme exporter protein A
 gi|77381807|gb|ABA73320.1| cytochrome C biogenesis ATP-binding export protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 211

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59
           + SG  +   G  G+GKT+ + LL   +Q  +  V +  +P G   +E AR++L      
Sbjct: 28  LASGDMVQISGPNGSGKTSLLRLLAGLMQPTDGQVLLNGKPLGEQRSELARNLLWIGHAA 87

Query: 60  ---DEFGAEAEAIVFAAARLDHVENVIRPALME 89
              D    E       A       + I  AL  
Sbjct: 88  GIKDLLTPEENLTWLCALHQPAERDAIWQALAA 120


>gi|15618479|ref|NP_224764.1| cytidylate kinase [Chlamydophila pneumoniae CWL029]
 gi|15836099|ref|NP_300623.1| cytidylate kinase [Chlamydophila pneumoniae J138]
 gi|16752470|ref|NP_444732.1| cytidylate kinase [Chlamydophila pneumoniae AR39]
 gi|33241921|ref|NP_876862.1| cytidylate kinase [Chlamydophila pneumoniae TW-183]
 gi|9910760|sp|Q9Z7Y5|KCY_CHLPN RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|4376861|gb|AAD18708.1| CMP kinase [Chlamydophila pneumoniae CWL029]
 gi|7189111|gb|AAF38054.1| cytidylate kinase [Chlamydophila pneumoniae AR39]
 gi|8978939|dbj|BAA98774.1| CMP kinase [Chlamydophila pneumoniae J138]
 gi|33236431|gb|AAP98519.1| cytidylate kinase [Chlamydophila pneumoniae TW-183]
 gi|269303446|gb|ACZ33546.1| cytidylate kinase [Chlamydophila pneumoniae LPCoLN]
          Length = 216

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  G GK+T    L   L
Sbjct: 1  MIITIDGPSGTGKSTTAKALADHL 24


>gi|145629579|ref|ZP_01785377.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 22.1-21]
 gi|145639060|ref|ZP_01794668.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittII]
 gi|146325069|sp|Q4QK57|POTA_HAEI8 RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|144978422|gb|EDJ88186.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 22.1-21]
 gi|145272032|gb|EDK11941.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittII]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|311070661|ref|YP_003975584.1| deoxyadenosine/deoxycytidine kinase [Bacillus atrophaeus 1942]
 gi|310871178|gb|ADP34653.1| deoxyadenosine/deoxycytidine kinase [Bacillus atrophaeus 1942]
          Length = 217

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 72/227 (31%), Gaps = 40/227 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    +   +  E    P  E   H       + +    
Sbjct: 12  ITVAGTVGVGKSTLTRTLAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119
           +   F A R        +     G   + DR  + D+       A +G      +    S
Sbjct: 63  QIY-FLAERF----KEQKNIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTS 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           L E   ++     PD  I L+  ++  L R++ R    E        + +    E+    
Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLNNILARIEERGREMEL-------QTNRSYWEEMYTR 170

Query: 177 FLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +               +   +++   S + +   +  ++ E  +K
Sbjct: 171 YENWISGFNACPVLKIRIEDYDLLNDEDSIEKIIDQVSTVIHETRKK 217


>gi|302382603|ref|YP_003818426.1| sulfate adenylyltransferase large subunit [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193231|gb|ADL00803.1| sulfate adenylyltransferase, large subunit [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 620

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L+R L                      R V+L       G   +   
Sbjct: 452 GLSGSGKSTIAAALERRLHAAG-----------------VRTVVLDGDNLRHGLNRDLGF 494

Query: 71  FAAARLDHVENVIRPAL---MEGKILLC 95
               R ++V  V   A      G + +C
Sbjct: 495 SDTDRSENVRRVAEVAHLFAETGVVAIC 522


>gi|261334157|emb|CBH17151.1| dynein heavy chain, putative [Trypanosoma brucei gambiense DAL972]
          Length = 4307

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 22/117 (18%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G+GK+T + +L++ +Q    +V +             R  LL     +     
Sbjct: 2006 VVLVGPSGSGKSTLLRILRKAMQILKIEVPLHVMNPKAIH----RQQLLGYMDPDTREWY 2061

Query: 67   EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + ++ AAAR     +V+R        +LCD                   +++SL  +
Sbjct: 2062 DGVLSAAAR-----DVVRQPKESRPWILCD-------------GDIDPEWVESLNSV 2100


>gi|255282857|ref|ZP_05347412.1| efflux ABC transporter, permease/ATP-binding protein [Bryantella
           formatexigens DSM 14469]
 gi|255266631|gb|EET59836.1| efflux ABC transporter, permease/ATP-binding protein [Bryantella
           formatexigens DSM 14469]
          Length = 606

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           I+  G  GAGKTT ++LL RF +     + +     GTP  E  R  + +
Sbjct: 396 IAIVGPTGAGKTTMVNLLMRFYELNGGTITI----DGTPINELKRENIHN 441


>gi|255284422|ref|ZP_05348977.1| efflux ABC transporter, permease/ATP-binding protein [Bryantella
           formatexigens DSM 14469]
 gi|255265047|gb|EET58252.1| efflux ABC transporter, permease/ATP-binding protein [Bryantella
           formatexigens DSM 14469]
          Length = 606

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           I+  G  GAGKTT ++LL RF +     + +     GTP  E  R  + +
Sbjct: 396 IAIVGPTGAGKTTMVNLLMRFYELNGGTITI----DGTPINELKRENIHN 441


>gi|242399183|ref|YP_002994607.1| GTPase-like protein [Thermococcus sibiricus MM 739]
 gi|242265576|gb|ACS90258.1| GTPase-like protein [Thermococcus sibiricus MM 739]
          Length = 481

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 9/80 (11%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK+     + + LQ   Y V   R P   P  +  + ++      E   + E  +   
Sbjct: 168 GSGKSQTSRKVAQLLQEMGYKVVAIRHP--MPYGDLRKQIVQRFATYEDLDKHECTIEE- 224

Query: 74  ARLDHVENVIRPALMEGKIL 93
                      P +  G ++
Sbjct: 225 ------REEYEPYIDRGMVV 238


>gi|154499090|ref|ZP_02037468.1| hypothetical protein BACCAP_03082 [Bacteroides capillosus ATCC
          29799]
 gi|150271930|gb|EDM99156.1| hypothetical protein BACCAP_03082 [Bacteroides capillosus ATCC
          29799]
          Length = 145

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
          GAGKTT +  L      +     +  E G     E     LLS             +F A
Sbjct: 15 GAGKTTFLKRLVHCFPGQ-RTALIVNEYGR----EGVDGALLSGLGASLTEIDNGSIFCA 69

Query: 74 ARLDHVENVIRPALMEGKILL 94
           RL+  E V+R  L E   ++
Sbjct: 70 CRLEQFEEVLRSTLTEKPDVI 90


>gi|145352660|ref|XP_001420656.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580891|gb|ABO98949.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 227

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 74/232 (31%), Gaps = 45/232 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M   L +   G  G GK T I++L+R    K  + V H TR P          + +    
Sbjct: 1   MARPLVVV--GPSGVGKGTLIAMLQREFPDKFGFSVSHTTRSPRPGEVHGTHYNFVDKST 58

Query: 59  VDEFGAEAEAIVFAAARLDHVENVI--------RPALMEGKILLCDRFLDSSYAYQGERD 110
           ++      + + +A     HV   I        +     G+I L D         QG   
Sbjct: 59  MERDIENGKFLEYA-----HVHQNIYGTSFAAVKTVTKSGRICLLD------IDVQGAEL 107

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +      L    V    P          +   +R++ R +  E A L   E     + 
Sbjct: 108 VKKSD----LNAAYVFIAPPSM--------EELERRLRGRGTESEDAVLKRLENARNEMA 155

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
           +K  + F D          IV+           + +++   V+   S  SS+
Sbjct: 156 KKDVEGFFDA--------VIVN--DDVDKAYEALKSVIAAHVETGASSASSR 197


>gi|134077167|emb|CAK45508.1| unnamed protein product [Aspergillus niger]
          Length = 1259

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 15/94 (15%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            +G FI+  G  G+GK++ I+LL+RF   +   + +   P      ++ R  L     +  
Sbjct: 1043 AGAFIALVGATGSGKSSVINLLERFYTGETGAIALDDMPIEQYNLDSYRGYLALVDQNPC 1102

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                            +   +   L  G++++ D
Sbjct: 1103 ---------------LIGETLSDCLQSGELVVLD 1121


>gi|146298184|ref|YP_001192775.1| adenylate kinase [Flavobacterium johnsoniae UW101]
 gi|189046016|sp|A5FMV7|KAD_FLAJO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|146152602|gb|ABQ03456.1| Adenylate kinase [Flavobacterium johnsoniae UW101]
          Length = 190

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 69/221 (31%), Gaps = 50/221 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    LK                      +  R  L +    E G +A
Sbjct: 4   IVLFGKPGAGKGTQAEFLKEK-----------YNLTHLSTGDIFRFNLKN--DTELGKQA 50

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLDSLQEISV 125
              +      + V   +  A++  ++    +  DS  + + G   +            ++
Sbjct: 51  RVFM---DNGELVPCEVTTAMLIDEV---KKHPDSAGFLFDGYPRTLDQAE-------AL 97

Query: 126 QEVMPDC------TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            + +P        TI L+   +I +KR+  R             R D    EK R  + +
Sbjct: 98  DKFLPTIGSSVTATIALEADDEILVKRLLERGKTSG--------RADDQDEEKIRVRYQE 149

Query: 180 IAR---------NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                          ++ + VD   + + +   + +++  L
Sbjct: 150 YNEKTAPLIGYYKDQNKFYAVDGIGTIEQITERLTSVIDNL 190


>gi|56707689|ref|YP_169585.1| cytidylate kinase [Francisella tularensis subsp. tularensis SCHU
          S4]
 gi|110670160|ref|YP_666717.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          FSC198]
 gi|134301965|ref|YP_001121934.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          WY96-3418]
 gi|224456758|ref|ZP_03665231.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          MA00-2987]
 gi|254370197|ref|ZP_04986203.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          FSC033]
 gi|254874501|ref|ZP_05247211.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          MA00-2987]
 gi|56604181|emb|CAG45192.1| cytidylate kinase [Francisella tularensis subsp. tularensis SCHU
          S4]
 gi|110320493|emb|CAL08575.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          FSC198]
 gi|134049742|gb|ABO46813.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          WY96-3418]
 gi|151568441|gb|EDN34095.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          FSC033]
 gi|254840500|gb|EET18936.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          MA00-2987]
 gi|282158853|gb|ADA78244.1| cytidylate kinase [Francisella tularensis subsp. tularensis
          NE061598]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          MN+   I+ +G  G GK T    L ++
Sbjct: 1  MNNSKIITIDGPSGVGKGTLAKALAKY 27


>gi|71754823|ref|XP_828326.1| dynein heavy chain [Trypanosoma brucei TREU927]
 gi|70833712|gb|EAN79214.1| dynein heavy chain, putative [Trypanosoma brucei]
          Length = 4307

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 22/117 (18%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G+GK+T + +L++ +Q    +V +             R  LL     +     
Sbjct: 2006 VVLVGPSGSGKSTLLRILRKAMQILKIEVPLHVMNPKAIH----RQQLLGYMDPDTREWY 2061

Query: 67   EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + ++ AAAR     +V+R        +LCD                   +++SL  +
Sbjct: 2062 DGVLSAAAR-----DVVRQPKESRPWILCD-------------GDIDPEWVESLNSV 2100


>gi|223932556|ref|ZP_03624557.1| ABC transporter related protein [Streptococcus suis 89/1591]
 gi|330833132|ref|YP_004401957.1| ABC transporter-like protein [Streptococcus suis ST3]
 gi|223898827|gb|EEF65187.1| ABC transporter related protein [Streptococcus suis 89/1591]
 gi|329307355|gb|AEB81771.1| ABC transporter related protein [Streptococcus suis ST3]
          Length = 252

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA----ARHVLLSCG 58
            G FI+  G  GAGK+T  +++   L   +  VH+  E      AE        V     
Sbjct: 34  QGDFITILGGNGAGKSTLFNVIAGTLPLTSGSVHILGEDVTNWPAEKRAKYLARVFQDPK 93

Query: 59  VDEFGAEA--EAIVFAAARLD 77
           +         E ++ A  R +
Sbjct: 94  MGTAPRMTVAENLLIAKYRGE 114


>gi|207525228|gb|ACI24156.1| ATP-binding cassette sub-family B member 2 [Toxoplasma gondii]
          Length = 1407

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF--LQ-RKNYDVHVTREPGGTPAAEAARHVLL 55
            M  G  ++  G  G GK+T + LL+RF  L+     +   + +P G   A+A R V L
Sbjct: 1154 MKPGETVALVGASGCGKSTVVQLLERFYDLENSSGVETGASSDPSGPRTADATREVEL 1211


>gi|192293490|ref|YP_001994095.1| spermidine/putrescine ABC transporter ATPase subunit
          [Rhodopseudomonas palustris TIE-1]
 gi|192287239|gb|ACF03620.1| spermidine/putrescine ABC transporter ATPase subunit
          [Rhodopseudomonas palustris TIE-1]
          Length = 381

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G FI+  G  G+GKTT ++LL  F      ++ V  +P
Sbjct: 57 GEFITLLGPSGSGKTTLLNLLAGFQTLDGGEILVDGKP 94


>gi|160934874|ref|ZP_02082260.1| hypothetical protein CLOLEP_03749 [Clostridium leptum DSM 753]
 gi|156866327|gb|EDO59699.1| hypothetical protein CLOLEP_03749 [Clostridium leptum DSM 753]
          Length = 181

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
             ++LD P+ +   R++N  +       D F R    +H+KR  ++   A        ++
Sbjct: 104 VIVLLDTPLRVLQLRLKNDRNRPLLQRPDRF-RFIRELHQKRMPLYRRAAD------VVI 156

Query: 192 DSAHSFQSVATNILNIVWE 210
            +  S  +V   +L  + E
Sbjct: 157 PTKGSPNAVCRQVLQALEE 175


>gi|147679072|ref|YP_001213287.1| excinuclease ATPase subunit [Pelotomaculum thermopropionicum SI]
 gi|146275169|dbj|BAF60918.1| excinuclease ATPase subunit [Pelotomaculum thermopropionicum SI]
          Length = 962

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           GLFI   G+ G+GK+T ++ +L R L ++ +    TR PG     E   H+
Sbjct: 630 GLFICVTGVSGSGKSTLVNDILYRKLAQELHRAR-TR-PGCCRGIEGIEHL 678


>gi|119719538|ref|YP_920033.1| cytidylate kinase [Thermofilum pendens Hrk 5]
 gi|119524658|gb|ABL78030.1| cytidylate kinase, putative [Thermofilum pendens Hrk 5]
          Length = 187

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 41/174 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           ++  G  G+GKTT+   +                     +    R +    GVD      
Sbjct: 8   VAVSGTPGSGKTTYARFIAER-----------YNLRYVSSGSLFREMAKKLGVDLI---- 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLFLDSLQEI 123
                   RL  +                DR +DS     A +G      HL +  L++I
Sbjct: 53  --------RLHSMAEENEDI---------DRAVDSRAIEEAKKGNVVIEGHLAVWLLKDI 95

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +      D  +I D P+++  +R+  R S+     L+  + ++   +E+ R+ +
Sbjct: 96  A------DVKVIFDAPLEVRARRIAQRESIPLEKALEEIKIREKSNYERARRYY 143


>gi|15611373|ref|NP_223024.1| guanylate kinase [Helicobacter pylori J99]
 gi|11133267|sp|Q9ZMB7|KGUA_HELPJ RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|4154835|gb|AAD05889.1| GUANYLATE KINASE [Helicobacter pylori J99]
 gi|307637014|gb|ADN79464.1| guanylate kinase [Helicobacter pylori 908]
 gi|325995608|gb|ADZ51013.1| Guanylate kinase [Helicobacter pylori 2018]
 gi|325997204|gb|ADZ49412.1| Guanylate kinase [Helicobacter pylori 2017]
          Length = 206

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           MN+   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MNNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|25028116|ref|NP_738170.1| cytidylate kinase [Corynebacterium efficiens YS-314]
 gi|259507173|ref|ZP_05750073.1| cytidylate kinase [Corynebacterium efficiens YS-314]
 gi|23493400|dbj|BAC18370.1| putative cytidylate kinase [Corynebacterium efficiens YS-314]
 gi|259165254|gb|EEW49808.1| cytidylate kinase [Corynebacterium efficiens YS-314]
          Length = 236

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           GL I+ +G  G GK+T    L   L  K  D
Sbjct: 10 GGLIIAIDGPSGTGKSTTSRALATRLNAKYLD 41


>gi|163940966|ref|YP_001645850.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
 gi|163863163|gb|ABY44222.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
          Length = 553

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
            G FI   G  G+GKTT +   K+ L         T   G
Sbjct: 32 QKGEFIVLAGGSGSGKTTLLKHFKKELLPIGTRSGHTYYDG 72


>gi|99078306|ref|YP_611564.1| ABC transporter related [Ruegeria sp. TM1040]
 gi|99035444|gb|ABF62302.1| ABC transporter-related protein [Ruegeria sp. TM1040]
          Length = 241

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G FI+  G  G+GKTT ++++ 
Sbjct: 25 MKKGEFIALLGASGSGKTTLLNIIA 49


>gi|311992772|ref|YP_004009639.1| Dda DNA helicase [Acinetobacter phage Acj61]
 gi|295815061|gb|ADG35987.1| Dda DNA helicase [Acinetobacter phage Acj61]
          Length = 442

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 30/97 (30%), Gaps = 3/97 (3%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M   G  I+  G  G GKTT    L   L R      +   P     A+     L     
Sbjct: 24  MKTKGQHITINGPAGTGKTTLTKFLINHLIRTGESGIMLAAPTHQ--AKKVLSKLAGMEA 81

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
               +  +            E    P L E ++L+CD
Sbjct: 82  QTIHSLLKINPTTYEDATLFEQSDVPDLSECRVLICD 118


>gi|307721676|ref|YP_003892816.1| signal recognition particle subunit FFH/SRP54 (srp54) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979769|gb|ADN09804.1| signal recognition particle subunit FFH/SRP54 (srp54) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 451

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 26/156 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT    L  +L+ K   V  V  +     A E  R +          +  E  
Sbjct: 101 GLQGSGKTTTTGKLATYLKNKGKKVLIVAADLQRLAAVEQLRQI---------TSAIEVE 151

Query: 70  VFAAARLDHVENVIRPAL--MEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           ++      +   V++ AL   + KI   +L D            R +     +D L+   
Sbjct: 152 LYEDEATKNPVEVVKAALKYADSKIFDVVLID---------TAGRLAIDDELMDELKA-V 201

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                PD    +      G   V+   + +E   +D
Sbjct: 202 KDAAKPDEIFYV-ADSLTGQDAVRTATTFKEKIGID 236


>gi|300811247|ref|ZP_07091751.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
          subsp. bulgaricus PB2003/044-T3-4]
 gi|300497772|gb|EFK32790.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
          subsp. bulgaricus PB2003/044-T3-4]
          Length = 236

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          ++ G+FI+  G  GAGK+T I+ L
Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47


>gi|300717290|ref|YP_003742093.1| nitrate/sulfonate/bicarbonate ABC transporter, ATP-binding
          protein [Erwinia billingiae Eb661]
 gi|299063126|emb|CAX60246.1| nitrate/sulfonate/bicarbonate ABC transporter, ATP-binding
          protein [Erwinia billingiae Eb661]
          Length = 275

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +N G FI+  G  G GK+T + ++   ++
Sbjct: 47 INQGEFITLLGPSGCGKSTLLKMVAGLIE 75


>gi|254876344|ref|ZP_05249054.1| signal recognition particle receptor ftsY [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254842365|gb|EET20779.1| signal recognition particle receptor ftsY [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 334

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 9/93 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGA 64
            I   G+ G GKTT I  L + LQ +   V +        AA E  R         +   
Sbjct: 132 LIV--GVNGVGKTTTIGKLTKKLQSEGKSVILAAGDTFRAAAVEQLREW-GDRNNTQVVY 188

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96
           + E     A     + + I  A   G  +++ D
Sbjct: 189 QKE----GADSASVIYDAISSAKSRGIDVVIAD 217


>gi|213647603|ref|ZP_03377656.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. J185]
          Length = 215

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61


>gi|209558973|ref|YP_002285445.1| dephospho-CoA kinase [Streptococcus pyogenes NZ131]
 gi|209540174|gb|ACI60750.1| Dephospho-CoA kinase [Streptococcus pyogenes NZ131]
          Length = 203

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52
              + I   G   +GK+T + ++    ++  Y       V    +  G    EA R    
Sbjct: 4   KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 59

Query: 53  --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +L + G  +    +E +      +         +I+  L   +             + 
Sbjct: 60  NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 107

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            +  +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         + 
Sbjct: 108 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 165

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                      L I   +P    ++D++    ++   + + +  L   R
Sbjct: 166 -----------LPIEEKKPYASLVIDNSGDIAALIKQVQSALLSLANPR 203


>gi|254374363|ref|ZP_04989845.1| cytidylate kinase [Francisella novicida GA99-3548]
 gi|151572083|gb|EDN37737.1| cytidylate kinase [Francisella novicida GA99-3548]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          MN+   I+ +G  G GK T    L ++
Sbjct: 1  MNNSKIITIDGPSGVGKGTLAKALAKY 27


>gi|148826820|ref|YP_001291573.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittGG]
 gi|146345487|sp|P45171|POTA_HAEIN RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|148718062|gb|ABQ99189.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae PittGG]
 gi|301170098|emb|CBW29702.1| polyamine transporter subunit [Haemophilus influenzae 10810]
          Length = 372

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|118497548|ref|YP_898598.1| cytidylate kinase [Francisella tularensis subsp. novicida U112]
 gi|195536244|ref|ZP_03079251.1| cytidylate kinase [Francisella tularensis subsp. novicida FTE]
 gi|118423454|gb|ABK89844.1| cytidylate kinase [Francisella novicida U112]
 gi|194372721|gb|EDX27432.1| cytidylate kinase [Francisella tularensis subsp. novicida FTE]
          Length = 221

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          MN+   I+ +G  G GK T    L ++
Sbjct: 1  MNNSKIITIDGPSGVGKGTLAKALAKY 27


>gi|27817709|emb|CAD61136.1| transcription regulator [Cupriavidus oxalaticus]
          Length = 314

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 10/81 (12%)

Query: 144 LKRVQNRYSLRESACLDYFERKDVMIHEKRRQI--------FLDIARNQPDRCHIVDSAH 195
           L R Q R     +   D +E ++   H              F +I  +  +R   +    
Sbjct: 145 LARAQERVEANPAEAFDAWEARNQEFHNALMAASPSKWLANFREILFHNSERYRRLSGTQ 204

Query: 196 SF--QSVATNILNIVWELVQK 214
                 V      I    + +
Sbjct: 205 GPISVEVHEEHKTIFEAAIPR 225


>gi|30995444|ref|NP_439498.2| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae Rd KW20]
 gi|260580820|ref|ZP_05848646.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Haemophilus influenzae RdAW]
 gi|260092637|gb|EEW76574.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Haemophilus influenzae RdAW]
          Length = 382

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 43 INNGEFVTILGPSGCGKTTVLRLLA 67


>gi|39937708|ref|NP_949984.1| putative spermidine/putrescine transport system ATP-binding
          protein [Rhodopseudomonas palustris CGA009]
 gi|39651568|emb|CAE30090.1| putative spermidine/putrescine transport system ATP-binding
          protein [Rhodopseudomonas palustris CGA009]
          Length = 381

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G FI+  G  G+GKTT ++LL  F      ++ V  +P
Sbjct: 57 GEFITLLGPSGSGKTTLLNLLAGFQTLDGGEILVDGKP 94


>gi|37520081|ref|NP_923458.1| adenylylsulfate kinase [Gloeobacter violaceus PCC 7421]
 gi|35211073|dbj|BAC88453.1| adenylylsulfate kinase [Gloeobacter violaceus PCC 7421]
          Length = 174

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 36/149 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G+ + F G+ GAGK+T   ++ + LQ    +V                  +L     
Sbjct: 1   MGKGVTLWFTGLSGAGKSTISGIVAKKLQEIGRNVE-----------------VLDGDEV 43

Query: 61  EFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                A      A R  +V  +    R     G I +      +   Y+  R+  +   +
Sbjct: 44  RLNLSAGLSFSKADRDTNVRRIGYVCRLLSRNGVIAIS----AAISPYRNTREELRANII 99

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           D L+            I +D P+D+ ++R
Sbjct: 100 DFLE------------IFVDCPLDVCIER 116


>gi|1574806|gb|AAC22991.1| spermidine/putrescine ABC transporter, ATP-binding protein (potA)
          [Haemophilus influenzae Rd KW20]
          Length = 381

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 42 INNGEFVTILGPSGCGKTTVLRLLA 66


>gi|86131177|ref|ZP_01049776.1| Guanylate kinase [Dokdonia donghaensis MED134]
 gi|85818588|gb|EAQ39748.1| Guanylate kinase [Dokdonia donghaensis MED134]
          Length = 199

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 6/101 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVL----L 55
           ++G  I F    G+GKTT +  L  +  L  +      +REP GT       + +     
Sbjct: 12  HTGKLIVFSAPSGSGKTTIVRHLLGQPELNLEFSISATSREPRGTEVHGTDYYFISLKEF 71

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              +          V+       +   ++     GK ++ D
Sbjct: 72  KNHIKADDFLEWEEVYRDNFYGTLWKEVQRIWAMGKHVIFD 112


>gi|238787955|ref|ZP_04631751.1| Shikimate kinase 2 [Yersinia frederiksenii ATCC 33641]
 gi|238723903|gb|EEQ15547.1| Shikimate kinase 2 [Yersinia frederiksenii ATCC 33641]
          Length = 174

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
             I L    ++   R+       +   L       + + +   R  ++ ++A       H
Sbjct: 96  LVIYLRASANVLAGRLAEDPEDAQRPSLTGKPIVEEMLDVLASREALYQEVAH------H 149

Query: 190 IVDSAHSFQSVATNILNIV 208
           ++D+    + V  +IL I+
Sbjct: 150 VLDATQPPEEVVEHILQIL 168


>gi|71400484|ref|XP_803066.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70865657|gb|EAN81620.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1208

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFG 63
            +   G   +GKTT I  L   L   + + D  V  E    T   E  R + LS   +   
Sbjct: 956  VVITGPPFSGKTTQIRRLVEKLNVSQLDLDAMVRAEAEFDTAEGELIRTI-LSEREENRT 1014

Query: 64   AE 65
              
Sbjct: 1015 PR 1016


>gi|302392650|ref|YP_003828470.1| dethiobiotin synthase [Acetohalobium arabaticum DSM 5501]
 gi|302204727|gb|ADL13405.1| dethiobiotin synthase [Acetohalobium arabaticum DSM 5501]
          Length = 240

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 1  MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          M +G+FI+  G + G GKT   + L   LQ++ Y++   +           R  LL+  +
Sbjct: 1  MEAGIFIT--GTDTGIGKTVVTAGLVAALQQQGYNIGAMKPFQSGAVESNGR--LLAPDL 56

Query: 60 DEFGAEAEA 68
          +      E 
Sbjct: 57 EFLLKTTEL 65


>gi|260779464|ref|ZP_05888354.1| adenylylsulfate kinase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604273|gb|EEX30577.1| adenylylsulfate kinase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 205

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L  + Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENKLAEQGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|256062324|ref|XP_002570311.1| hypothetical protein [Schistosoma mansoni]
 gi|227294253|emb|CAY19161.1| expressed protein [Schistosoma mansoni]
          Length = 849

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 134 IILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
           I+LD+  +   KR+  R S  +    +   D  +R   +   +  Q    +  +  ++  
Sbjct: 211 ILLDISEEYSRKRLSERISHTDEVCNNNEPDSIDRCLSIFKNQTLQA-CKLIDDD-EKLR 268

Query: 190 IVDSAHSFQSVATNILNIVWELVQKRV 216
           ++D   +   +  +IL +   ++   +
Sbjct: 269 VIDGELNCNEILEDILEVCDHMISNNL 295


>gi|260811354|ref|XP_002600387.1| hypothetical protein BRAFLDRAFT_269132 [Branchiostoma floridae]
 gi|229285674|gb|EEN56399.1| hypothetical protein BRAFLDRAFT_269132 [Branchiostoma floridae]
          Length = 214

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 69/224 (30%), Gaps = 60/224 (26%)

Query: 7   ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I F  G  GAGK T    + +      Y VH+        A +  R        +     
Sbjct: 25  IVFVLGPPGAGKGTQSQNIVKEF---GY-VHL-------SAGDLLR-------AERNSPG 66

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFLD 118
           +E              +I   +  G I+       L +R +  S + +   D       D
Sbjct: 67  SE-----------YGELIETHIKNGSIVPVAITISLIERAMKDSASTKFLIDGFPRNE-D 114

Query: 119 SLQEISVQEVMPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           +LQ  +  E M D T     +  D   ++ ++R  +R   +  A     +     + ++ 
Sbjct: 115 NLQGWN--ERMEDKTNLKFVLFFDCSEEVCVQRCLHRGEQQAKAGAKRSDDNLDSLRKRI 172

Query: 174 ----------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
                        +  ++         VD+A S   +   +  +
Sbjct: 173 STYTNSTWPIIDHYQKLSL-----VRTVDAAGSEDEIFAEVKKL 211


>gi|150866264|ref|XP_001385802.2| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
           [Scheffersomyces stipitis CBS 6054]
 gi|149387520|gb|ABN67773.2| Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
           [Scheffersomyces stipitis CBS 6054]
          Length = 290

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 65/214 (30%), Gaps = 48/214 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REP---GGTPAAEAARHVLLSCGVDEF 62
           G  G+GK T  +LL    +   + VH++     RE     G+   E   + +    +   
Sbjct: 107 GGPGSGKGTQSALLV---KEHGF-VHLSAGDLLREEQKREGSKYGELIANYIKEGLIVP- 161

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                A++         E  I+ +  +G          + +   G         L    +
Sbjct: 162 QEVTVALL---------EQAIKESYAKGS---------TKFLIDGFPRKMDQA-LTFENQ 202

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+        T+  + P  + LKR+  R         D  E           + F++ + 
Sbjct: 203 IAKSSF----TLFFECPEQVMLKRLLERGKT-SGRTDDNIESITKRF-----RTFIETSM 252

Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVWE 210
                  +  +   V        V T + N + E
Sbjct: 253 PVVNHFEEQGKVIKVQCDQPVDVVYTQVKNALSE 286


>gi|91781648|ref|YP_556854.1| ABC spermidine/putrescine transporter, ATPase subunit
          [Burkholderia xenovorans LB400]
 gi|91685602|gb|ABE28802.1| ABC spermidine/putrescine transporter, ATPase subunit
          [Burkholderia xenovorans LB400]
          Length = 356

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+F G  G GKTT + ++ 
Sbjct: 28 RGEFITFLGPSGCGKTTVLRMIA 50


>gi|18977413|ref|NP_578770.1| ATPase [Pyrococcus furiosus DSM 3638]
 gi|18893102|gb|AAL81165.1| hypothetical protein PF1041 [Pyrococcus furiosus DSM 3638]
          Length = 618

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+ ++  G  GAGKTT +  L  +       V    +P     +E  
Sbjct: 276 GILVA--GPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLNVSEEI 320


>gi|11499533|ref|NP_070775.1| ATPase [Archaeoglobus fulgidus DSM 4304]
 gi|2648590|gb|AAB89303.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 606

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ IS  G  GAGK+T  + +  FL    Y V     P      +       +    +
Sbjct: 276 QRGILIS--GPPGAGKSTFAASVANFLLENGYIVKTMESPRDLMVRDEITQY--APLEGD 331

Query: 62  FGAEAEAIVF 71
               ++ ++ 
Sbjct: 332 MSLTSDILLL 341


>gi|330752309|emb|CBL87263.1| qdenylyl-sulfate kinase [uncultured Flavobacteria bacterium]
          Length = 198

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 14/85 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L+  L  +     +          +  R  + +          E   
Sbjct: 33  GLSGSGKSTIARALENDLYLRGIHSKLL-------DGDNLRSGINNNLSFSIEDRTE--- 82

Query: 71  FAAARLDHVENVIRPALMEGKILLC 95
               R      V +  +  G +++C
Sbjct: 83  -NIRRA---AEVSKLFMENGDVVIC 103


>gi|297617655|ref|YP_003702814.1| cytidylate kinase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145492|gb|ADI02249.1| cytidylate kinase [Syntrophothermus lipocalidus DSM 12680]
          Length = 225

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 79/240 (32%), Gaps = 61/240 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    +   L         T            R +      ++   + 
Sbjct: 3   IAIDGPAGAGKSTLARRIAERL---GILYVDT--------GAMYRALTWKALANKVNLKD 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI-LLCD--------------RFLDSSYAYQGERDS 111
           +A +    R   V   I  A   G++ + CD              R++    A +  R  
Sbjct: 52  KAEL----RNLAVRTDITLAYNMGQVRVFCDGTEVTDEIRSPEVSRWVPVVAADEEIRAI 107

Query: 112 --SQHLFLDSLQEISVQE------VMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDY 161
              +   +   Q + +        V+PD      L   ++    R + +  +++   +++
Sbjct: 108 MVEKQQAIAREQSVVMDGRDIGLCVLPDADYKFYLTASLEE-RARRRAKELVKKGYKVNF 166

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCH----------IVDSAH-SFQSVATNILNIVWE 210
            E          ++   +  +   +R            ++D++  S   V + +L+++ E
Sbjct: 167 QE---------VKEEIRERDKLDTERLVGPLTVLPDSIVIDTSDMSPDEVVSRVLSLIGE 217


>gi|284931172|gb|ADC31110.1| Cytidylate kinase [Mycoplasma gallisepticum str. F]
          Length = 224

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  G+GK+T   L+ + L
Sbjct: 10 IAIDGPAGSGKSTVAKLVAQRL 31


>gi|302554913|ref|ZP_07307255.1| heme ABC exporter, ATP-binding protein CcmA [Streptomyces
          viridochromogenes DSM 40736]
 gi|302472531|gb|EFL35624.1| heme ABC exporter, ATP-binding protein CcmA [Streptomyces
          viridochromogenes DSM 40736]
          Length = 288

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G  I  EG  G+GK+T + LL 
Sbjct: 32 GRLIRVEGGNGSGKSTLLRLLA 53


>gi|224003833|ref|XP_002291588.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973364|gb|EED91695.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 235

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 36/173 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEA-ARHVLLSCGVDEF 62
           G  GAGKTT    +                  H++ +                +      
Sbjct: 14  GGTGAGKTTLARNIYAHFGAAGSTSENDCAIAHLSHDDYYRDIGHLSFEERAKTNFDHPS 73

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER------------- 109
             + + ++       HV+      L+EG+ ++C R+  S +    +              
Sbjct: 74  SLDTDLLIH------HVKE-----LLEGRSVVCPRYDFSRHCRYKDGEVDSEGRNSGRVV 122

Query: 110 ---DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                     +  L +  +  +M D  + +D   DI L R   R ++     L
Sbjct: 123 ESKRVILVEGILILSDRELVNLM-DLKVFVDASADIRLMRRIQRDTVERGRTL 174


>gi|182679182|ref|YP_001833328.1| hypothetical protein Bind_2221 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635065|gb|ACB95839.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 520

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 49/157 (31%), Gaps = 27/157 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63
            +S  G+ G GK+T  + L   +       V          +++  R  L     +    
Sbjct: 342 LVSIGGLSGTGKSTLAAALAPAIGPAPGARVL---------SSDRIRKGLFGVRAETRLP 392

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            EA A   +A     +  +    L  G+ ++ D                +      ++ +
Sbjct: 393 PEAYAPEVSARVYARITTLAETILHLGQGVVAD------------AVFDRMDDRAEIERV 440

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           + +  +P     L    +  L+R   R   R +   D
Sbjct: 441 AAKGNVPFLGFWL----ETSLERQIERVEARRNDASD 473


>gi|170017854|ref|YP_001728773.1| deoxynucleoside kinase [Leuconostoc citreum KM20]
 gi|169804711|gb|ACA83329.1| Deoxynucleoside kinase [Leuconostoc citreum KM20]
          Length = 213

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 59/195 (30%), Gaps = 37/195 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+   +L   L           E       +     L      ++G   
Sbjct: 2   IVLSGTIGAGKTSLTEMLAEHLGS---------EAFYESVDDNPILPLFYENPKKYGFLL 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHL 115
           +               I+ A   G   + DR  + D+           A Q E D  + L
Sbjct: 53  QIYFLNKRLSQ-----IQVAQATGCHNILDRSIYEDALLFQLTADLDRATQTEVDIYKSL 107

Query: 116 FLDSLQEIS-VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             + + EI+    +  P+  I + +  +  L R++ R    E       E   +      
Sbjct: 108 LDNMMAEIAGTANLKNPELLIHVRVSFETMLTRIKKRGRSFEQID----ENPGL------ 157

Query: 174 RQIFLDIARNQPDRC 188
              + ++ +   D  
Sbjct: 158 YAYYKELNKRYDDWF 172


>gi|148244662|ref|YP_001219356.1| guanylate kinase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326489|dbj|BAF61632.1| guanylate kinase [Candidatus Vesicomyosocius okutanii HA]
          Length = 203

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 4/98 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          MN+G+        G GKT+ +  L + ++     + H TR+P            +     
Sbjct: 1  MNNGVLFIISAPSGCGKTSLVKALIKKVENLCVSISHTTRQPRSGEIQGKNYFFVSKDEF 60

Query: 60 DEF---GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
          ++        E+           +  ++  L  G  ++
Sbjct: 61 NKMKSSNNFIESTQVFDNNYGSSKQSVQDLLNSGFDVI 98


>gi|5456699|gb|AAD43625.1|AF071410_1 ATP-binding cassette multidrug transport protein ATRC [Emericella
            nidulans]
          Length = 1284

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            +N G FI+F G  G GK+T I++L+RF
Sbjct: 1052 INKGQFIAFVGSSGCGKSTMIAMLERF 1078


>gi|15835352|ref|NP_297111.1| cytidylate kinase [Chlamydia muridarum Nigg]
 gi|270285524|ref|ZP_06194918.1| cytidylate kinase [Chlamydia muridarum Nigg]
 gi|270289535|ref|ZP_06195837.1| cytidylate kinase [Chlamydia muridarum Weiss]
 gi|301336921|ref|ZP_07225123.1| cytidylate kinase [Chlamydia muridarum MopnTet14]
 gi|9910745|sp|Q9PJU0|KCY_CHLMU RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|7190767|gb|AAF39547.1| cytidylate kinase [Chlamydia muridarum Nigg]
          Length = 216

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + LQ
Sbjct: 1  MIITIDGPAGTGKSTLAKALAKTLQ 25


>gi|609543|gb|AAA58770.1| This ORF is capable of encoding 432 aa which is similar to
           thymidylate kinases especially at two domains: the
           p-loop or catalytic site and the substrate binding site;
           ORF [Mus musculus]
 gi|1098271|prf||2115357A TYKi protein
          Length = 431

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 19/118 (16%)

Query: 2   NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHV-LLSC 57
             G F  I+ EG++  GKTT    L +  +  +     +R P    P  E    + LLS 
Sbjct: 180 QKGKFQVIAIEGLDATGKTT----LTQHFKSLSRLSSYSRHPPCIKPVEEDLLMMNLLSF 235

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                    E  +  A     V + I         ++ DR+  S+  Y    + S  L
Sbjct: 236 E--------EPFILWAN--YLVASEIAKE-STNFPVIVDRYWHSTATYAIATEVSGGL 282


>gi|325288334|ref|YP_004264515.1| Sulfate-transporting ATPase [Syntrophobotulus glycolicus DSM
          8271]
 gi|324963735|gb|ADY54514.1| Sulfate-transporting ATPase [Syntrophobotulus glycolicus DSM
          8271]
          Length = 292

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 11 GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTP 45
          G +GAGKTT + +L   L   +       RE G  P
Sbjct: 34 GPDGAGKTTLMRILVDLLVPDEGSVRVFGREYGYMP 69


>gi|296160387|ref|ZP_06843204.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia sp. Ch1-1]
 gi|295889368|gb|EFG69169.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia sp. Ch1-1]
          Length = 356

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+F G  G GKTT + ++ 
Sbjct: 28 RGEFITFLGPSGCGKTTVLRMIA 50


>gi|222087299|ref|YP_002545836.1| hypothetical protein Arad_4123 [Agrobacterium radiobacter K84]
 gi|221724747|gb|ACM27903.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 169

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I F G+ G+GKTT    L + L+     V
Sbjct: 1  MLIIFGGLPGSGKTTTAQALAKRLKAMYVRV 31


>gi|219126611|ref|XP_002183546.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404783|gb|EEC44728.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 623

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I+  G  GAGK+T + LL   L     DV
Sbjct: 403 ITIVGPNGAGKSTLLKLLTGALNATGGDV 431


>gi|196012467|ref|XP_002116096.1| hypothetical protein TRIADDRAFT_30390 [Trichoplax adhaerens]
 gi|190581419|gb|EDV21496.1| hypothetical protein TRIADDRAFT_30390 [Trichoplax adhaerens]
          Length = 1018

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 19/115 (16%)

Query: 77  DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIIL 136
           + ++ VI+P   E      D F    +  +G   +S     + ++ ++     PD  IIL
Sbjct: 215 ETLDKVIQPWWDE------DPFRKKGFILEGFPRTS-----NQVRYMAQAGFYPDIIIIL 263

Query: 137 DLPVDIGLKR----VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            +     + R    +  R+  + +  ++  E++     E+ R++  + A  Q +R
Sbjct: 264 SVDDSDVMDRLLPPLMERWQTKRNKRIEKREKEK----ERLRKLKAERAARQAER 314


>gi|126654293|ref|ZP_01726070.1| recognition particle-docking protein [Bacillus sp. B14905]
 gi|126589257|gb|EAZ83418.1| recognition particle-docking protein [Bacillus sp. B14905]
          Length = 424

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I F G+ G GKTT I  L R L+ +   V +    G T  A A   +
Sbjct: 214 ILFVGVNGVGKTTTIGKLARRLKSQGKTVVLAA--GDTFRAGAIDQL 258


>gi|186474993|ref|YP_001856463.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia phymatum STM815]
 gi|184191452|gb|ACC69417.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia phymatum STM815]
          Length = 359

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTR 39
           G FI+F G  G GKTT + ++  F       ++    DV   R
Sbjct: 28 RGEFITFLGPSGCGKTTVLRMIAGFETPTRGTIRLDGRDVTHLR 71


>gi|67523787|ref|XP_659953.1| hypothetical protein AN2349.2 [Aspergillus nidulans FGSC A4]
 gi|40745304|gb|EAA64460.1| hypothetical protein AN2349.2 [Aspergillus nidulans FGSC A4]
 gi|259487749|tpe|CBF86663.1| TPA: ATP-binding cassette multidrug transport protein ATRC
            [Source:UniProtKB/TrEMBL;Acc:Q9Y8G2] [Aspergillus
            nidulans FGSC A4]
          Length = 1284

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            +N G FI+F G  G GK+T I++L+RF
Sbjct: 1052 INKGQFIAFVGSSGCGKSTMIAMLERF 1078


>gi|323336733|gb|EGA77997.1| Ura6p [Saccharomyces cerevisiae Vin13]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 56/209 (26%), Gaps = 34/209 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L +                 +    +A  +L +          E I 
Sbjct: 23  GGPGAGKGTQCEKLVK---------------DYSFVHLSAGDLLRAEQGRAGSQYGELIK 67

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-HLFLDSLQEISVQEVM 129
                   V   I  AL+   I       D+  A + +         +D         V 
Sbjct: 68  NCIKEGQIVPQEITLALLRNAI------SDNXKANKHKFLIDGFPRKMDQAISFERDIVE 121

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH------EKRRQIFLDIARN 183
               +  D P DI L+R+  R         D  E      +          + F      
Sbjct: 122 SKFILFFDCPEDIMLERLLERGKT-SGRSDDNIESIKKRFYTFKETSMPVIEYFET---- 176

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +   V    S + V  ++ + + + +
Sbjct: 177 -KSKVVRVRCDRSVEDVYKDVQDAIRDRL 204


>gi|325972948|ref|YP_004250012.1| ABC transporter ATP binding protein [Mycoplasma suis str. Illinois]
 gi|323651550|gb|ADX97632.1| ABC transporter, ATP binding protein [Mycoplasma suis str.
           Illinois]
          Length = 596

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 3   SGLFISFEGIEGAGKTTHISLL 24
            G FI+  G  G+GKTT I+LL
Sbjct: 353 QGEFIAILGPSGSGKTTLINLL 374


>gi|294660275|ref|NP_852941.2| cytidylate kinase [Mycoplasma gallisepticum str. R(low)]
 gi|298286817|sp|Q7NBV1|KCY_MYCGA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|284811931|gb|AAP56509.2| Cytidylate kinase [Mycoplasma gallisepticum str. R(low)]
 gi|284930405|gb|ADC30344.1| Cytidylate kinase [Mycoplasma gallisepticum str. R(high)]
          Length = 224

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  G+GK+T   L+ + L
Sbjct: 10 IAIDGPAGSGKSTVAKLVAQRL 31


>gi|290981239|ref|XP_002673338.1| Phosphoribulokinase/uridine kinase [Naegleria gruberi]
 gi|284086921|gb|EFC40594.1| Phosphoribulokinase/uridine kinase [Naegleria gruberi]
          Length = 272

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 14/155 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G   +GKTT    + + L  K   V V+++       E  R +  +   D    +     
Sbjct: 68  GGSASGKTTVCREIVKSLSDK-RVVVVSQDSFYRNLNEEERELARNNVYDFDHPD----- 121

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A   +  E   R  L  G  +   + D    S        + +  + ++ +     +E
Sbjct: 122 --AFDYEAFEETTRE-LKAGNPVDIPVYDFKTHSRTTETEPVEGADVIIIEGILIFFTKE 178

Query: 128 VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +    D  I +D   D+ L R   R +      L+
Sbjct: 179 MRELMDMKIFVDTDADVRLARRIRRDTKERGRDLE 213


>gi|257870906|ref|ZP_05650559.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805070|gb|EEV33892.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 184

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 37/149 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GKTT    L + L     +  +  +          +    +      G   
Sbjct: 6   ILLRGNSGSGKTTVAKALHQQL---GAEAVLISQDVFRREIFHVKD---TPNNHAVGLMM 59

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           EA+++A                 GK+  ++    ++  +A +  +D      L+S ++  
Sbjct: 60  EALLYA----------------RGKVPFII----VEGIFAREKYQDFL-LFLLESFEKC- 97

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
                       D+P    ++R + R   
Sbjct: 98  -------LIYYFDVPFQTTIERHRTRPQR 119


>gi|256820454|ref|YP_003141733.1| deoxynucleoside kinase [Capnocytophaga ochracea DSM 7271]
 gi|315223530|ref|ZP_07865385.1| deoxynucleoside kinase [Capnocytophaga ochracea F0287]
 gi|256582037|gb|ACU93172.1| deoxynucleoside kinase [Capnocytophaga ochracea DSM 7271]
 gi|314946446|gb|EFS98440.1| deoxynucleoside kinase [Capnocytophaga ochracea F0287]
          Length = 204

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 61/191 (31%), Gaps = 39/191 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I+  G  GAGKTT  SLL +    +    DV         P  +   H      ++ +  
Sbjct: 3   IAIAGNIGAGKTTLTSLLAKHYQWEAHFEDVV------DNPYLDDFYH-----QMERWSF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114
             +     +         I     +G  ++ DR  + D+               RD   +
Sbjct: 52  NLQIYFLNSRFRQ-----ILDFREKGNNIIQDRTIYEDAHIFAPNLHEMGLMSSRDFDNY 106

Query: 115 LFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             L +L + + +    PD  I L   V   + ++Q R    E+          +    + 
Sbjct: 107 KSLFALMERLVLP---PDLLIYLRSSVPNLVNQIQKRGRDYENTI-------SIDYLNRL 156

Query: 174 RQIFLDIARNQ 184
            Q +    ++ 
Sbjct: 157 NQRYEQWIKSY 167


>gi|148927238|ref|ZP_01810811.1| hypothetical protein TM7_0029 [candidate division TM7 genomosp.
           GTL1]
 gi|147887369|gb|EDK72820.1| hypothetical protein TM7_0029 [candidate division TM7 genomosp.
           GTL1]
          Length = 202

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 71/219 (32%), Gaps = 38/219 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGA 64
           I   G+ G+GKTT  S L R L+        +  +  G   ++  R +   +    E   
Sbjct: 3   IVISGLTGSGKTTLSSALCRILKCSPTRTSDLMLQLLGDNRSKDERMIGWKTQKSTEVTP 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A A    A +L                         +   +      + + L  L +  
Sbjct: 63  SAFAAGMQADQLHR-----------------------TLVQKAPGGVHESIALPVLLKPE 99

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-LDIARN 183
                    I+LD    +  +RV  R  +  +       RKD       RQ + L+++  
Sbjct: 100 QGVCR----ILLDTDSAVRFERVARREGVDSATAQVITSRKDDRTQNYMRQAYGLEVSSA 155

Query: 184 QPDR-CHIV-----DSAHSFQSVATNILNIVWELVQKRV 216
              R   ++     D+  +   V   +L    +L+++ +
Sbjct: 156 AYLRHFDVILRTGNDTEQTV--VLGELLKETEQLIEQAL 192


>gi|90411049|ref|ZP_01219063.1| Putative heme exporter protein A [Photobacterium profundum 3TCK]
 gi|90328262|gb|EAS44573.1| Putative heme exporter protein A [Photobacterium profundum 3TCK]
          Length = 216

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++SG  I  EG  GAGKTT + ++    +  +  V    E   +   +  + +L      
Sbjct: 24  ISSGELIQIEGHNGAGKTTLLRIIAGLGRADSGQVCWKSEGIESAREDYYQDLLFLGHQT 83

Query: 61  ----EFGAEAEAIVFAAARLDHVEN 81
               E  A      F A   + ++ 
Sbjct: 84  GVKRELTAYENLAFFQAMHNESIDQ 108


>gi|118350288|ref|XP_001008425.1| Adenylate kinase family protein [Tetrahymena thermophila]
 gi|89290192|gb|EAR88180.1| Adenylate kinase family protein [Tetrahymena thermophila SB210]
          Length = 194

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 10/85 (11%)

Query: 134 IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHE---KRRQIFLDIARNQPDRC 188
           I  +   +I  +R++ R  +  RE   L+ F ++    +    K +  F        D+C
Sbjct: 115 IFFECSKEIMWERIKKRAQISNREDDNLNSFTKRLDTFYNHTMKVKDYF-----ESQDKC 169

Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213
             +++  + +++   I   +  L++
Sbjct: 170 ITINAEDTPENIFATIETRLQLLLK 194


>gi|91774593|ref|YP_544349.1| ABC transporter related [Methylobacillus flagellatus KT]
 gi|91708580|gb|ABE48508.1| ABC transporter related protein [Methylobacillus flagellatus KT]
          Length = 268

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          M    G  ++  G  G+GKTT + L+   L+    +V VT E
Sbjct: 26 MKFPRGKVVAIMGGSGSGKTTLLRLIGGQLKPSGGEVRVTGE 67


>gi|78188831|ref|YP_379169.1| hypothetical protein Cag_0861 [Chlorobium chlorochromatii CaD3]
 gi|78171030|gb|ABB28126.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 532

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 71/195 (36%), Gaps = 28/195 (14%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G+ G+GK+T  + +   L          R           R +  S   D +  
Sbjct: 353 LLIVC-GLSGSGKSTLAASIASEL-----PAIHLRSDVERKRLAGLRPLERSPKSDLYSH 406

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                        H+  + R  L+EG  ++    +D+++  Q  R     L      E +
Sbjct: 407 S-----MTNNTYAHLLGLARFCLLEGYCVV----VDATFLRQSNRALFTTLA----NECN 453

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           V   +  CT     P  + ++RVQ R +L  +   D  + + V +  ++++    +  ++
Sbjct: 454 VPYRLLHCT----APKQVLMERVQLR-NLEGNDASDA-DAEVVAMQLEQQEA---LTDDE 504

Query: 185 PDRCHIVDSAHSFQS 199
                 +D+ H   +
Sbjct: 505 KKITITIDTTHPINA 519


>gi|464390|sp|P14929|FTSY_NEIGO RecName: Full=Cell division protein ftsY homolog
          Length = 416

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L ++ Q +   V +
Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLL 250


>gi|298207558|ref|YP_003715737.1| deoxynucleoside kinase [Croceibacter atlanticus HTCC2559]
 gi|83850194|gb|EAP88062.1| deoxynucleoside kinase [Croceibacter atlanticus HTCC2559]
          Length = 383

 Score = 37.7 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 22/191 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +++ EG  GAGKT+  + +      K         P      E                 
Sbjct: 183 YLAIEGNIGAGKTSLATKISEDFNAKLILERFKDNPFLPKFYE--------DKTRYAFPL 234

Query: 66  AEAIVFAAARLDHVENVI-RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122
             + +  A R   + + I +  L    I+  D  +  S  +           L S     
Sbjct: 235 EMSFL--ADRYQQLADDIAQYDLFTDFIV-SDYDVFKSLIFAQVTLQEDEYKLYSKLFYM 291

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +  +   PD  I L    D  L  ++ R    E +        D        + +L+  +
Sbjct: 292 MYKELAKPDAYIYLYQNTDRLLANIKERGREYEQSI-------DANYLLNINKSYLNFIK 344

Query: 183 NQPD-RCHIVD 192
           +QP     ++D
Sbjct: 345 SQPQMNVKVID 355


>gi|325103365|ref|YP_004273019.1| deoxynucleoside kinase [Pedobacter saltans DSM 12145]
 gi|324972213|gb|ADY51197.1| deoxynucleoside kinase [Pedobacter saltans DSM 12145]
          Length = 206

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 43/216 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   LL    +  N++       G     +    +       +         F  
Sbjct: 10  GAGKTTLTELLA---KNYNWEALFESVDGNPYLEDFYNDMKRWSFNLQI-------YFLN 59

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEISVQ 126
           +R   +  +          ++ DR  + D+     +    G   S  +    ++ +    
Sbjct: 60  SRFQQIREIQADTNRN---VIQDRTIYEDAFIFAENLHEMGLMTSRDYGNYRAIFDNITS 116

Query: 127 EVM-PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +  PD  I L   V   ++ +Q R    E++  LDY         +K  + +    +  
Sbjct: 117 FLKAPDLLIYLKASVPTLVENIQRRGREYEASIRLDYL--------QKLNEKYDAWIKGY 168

Query: 185 PD-RCHIVD------SAHS------FQSVATNILNI 207
              +  ++D      +  S        SV   I ++
Sbjct: 169 NQGKLLVLDKDKLDFANKSDDLGFIVDSVEKEIHSL 204


>gi|298675075|ref|YP_003726825.1| adenylylsulfate kinase [Methanohalobium evestigatum Z-7303]
 gi|298288063|gb|ADI74029.1| adenylylsulfate kinase [Methanohalobium evestigatum Z-7303]
          Length = 181

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 69/221 (31%), Gaps = 55/221 (24%)

Query: 1   MNSGL----FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
           MN+G     F+    G+ G GK+T  + L +  Q K +          T   +  R    
Sbjct: 1   MNNGNSNNGFVVWLTGLPGTGKSTISAELTKIFQEKGFC-------TETMDGDEIRK--- 50

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                  G  A+       R +H   V  +   L    + +       + A      S +
Sbjct: 51  -------GLSADLGFTKEDRQEHARRVAFVSKLLARNGVAV-------NVALISPYRSFR 96

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
               + ++            + +  P+++ ++R       +        E  D+      
Sbjct: 97  EHARNEIENFVE--------VYVKTPLEVCMERDPKGLYAKAQQG----EITDLT----- 139

Query: 174 RQIFLDIARN--QPDRCHIVD-SAHSFQSVATNILNIVWEL 211
              + D       P+   ++D    + +  A  I++ + EL
Sbjct: 140 --GYQDTYEEPLNPE--VVIDTCDTTPEGAAETIVSKLDEL 176


>gi|296130468|ref|YP_003637718.1| adenylate kinase [Cellulomonas flavigena DSM 20109]
 gi|296022283|gb|ADG75519.1| adenylate kinase [Cellulomonas flavigena DSM 20109]
          Length = 192

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 41/212 (19%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK T  + L   L         T         +  R  + +    E G   +
Sbjct: 6   VLLGPPGAGKGTQAARLAERL---GVPAVST--------GDIFRSNIKNG--TELGKRVQ 52

Query: 68  AIVFAAARL--DHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            I  + A +  +    ++R  L +   +   L D +          R+ +Q   LD +  
Sbjct: 53  DITASGALVPDELTNELVRDRLAQADAVEGFLLDGY---------PRNVAQVAALDEMLA 103

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD--- 179
           ++ +E+  D  I L +   + + R+  R  +   A     + +DV+ H     ++ +   
Sbjct: 104 VAGREL--DLAIELTVDPQVVVDRLTRRAEIEGRAD----DTEDVIRHR--LDVYAEQTA 155

Query: 180 -IARNQPDRCHI--VDSAHSFQSVATNILNIV 208
            I++    R  +  VD       V   +L  +
Sbjct: 156 PISQVYAARGLLAQVDGLGDVDDVTARLLAAL 187


>gi|297190522|ref|ZP_06907920.1| ABC transporter ATP-binding protein [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297150518|gb|EDY61744.2| ABC transporter ATP-binding protein [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 281

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSC 57
            +G F++  G  G GK+T + L+   L+    DV +     + P         R  LL  
Sbjct: 56  RAGEFVAIVGPSGCGKSTLLKLVAGLLKPSTGDVLLGGERVQGPRHDIGYVFQRAALL-- 113

Query: 58  GVDEFGAEAEAIVFAAAR 75
             +   A    ++ A  R
Sbjct: 114 --EWRSARRNILLQAEMR 129


>gi|255946650|ref|XP_002564092.1| ABC transporter sequence aa7 from patent WO200132904-A2-Penicillium
            chrysogenum [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591109|emb|CAP97335.1| ABC transporter sequence aa7 from patent WO200132904-A2-Penicillium
            chrysogenum [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1261

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRF 27
            + G +I+  G  G GK+T ++LL+RF
Sbjct: 1044 HKGKYIALVGPSGCGKSTIVALLERF 1069


>gi|163815564|ref|ZP_02206937.1| hypothetical protein COPEUT_01731 [Coprococcus eutactus ATCC 27759]
 gi|158449201|gb|EDP26196.1| hypothetical protein COPEUT_01731 [Coprococcus eutactus ATCC 27759]
          Length = 169

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 37/149 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+   I   G+ GAGK+T   LL + L    Y                 R ++   G +
Sbjct: 1   MNN---IVLTGMPGAGKSTIGVLLAKVL---GYKFVDADILIQDSQGMLLREIIAKYGDE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F                +EN +   + E  +++                 S     +++
Sbjct: 55  GFLK--------------IENDVNKGITEQHMVI-------------ATGGSAVYCREAM 87

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN 149
           ++   +    D  I ++LP +    R+ N
Sbjct: 88  EKYMAE----DMVIYINLPYEEIANRLGN 112


>gi|125542798|gb|EAY88937.1| hypothetical protein OsI_10422 [Oryza sativa Indica Group]
          Length = 275

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 36/149 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L    +              +  R         +
Sbjct: 96  QKGCVIWITGLSGSGKSTLACALSRELHCSGH-------LTYVLDGDNLR----HGLNRD 144

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
              +AE       R +++     V +     G I +      S  + Y+ +RD+ + L  
Sbjct: 145 LSFKAE------DRAENIRRVGEVAKLFADAGIICIA-----SLISPYRRDRDACRVLLP 193

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +S      + +     + +DLP++I   R
Sbjct: 194 ES------RFIE----VFMDLPLEICEAR 212


>gi|90577565|ref|ZP_01233376.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Vibrio angustum S14]
 gi|90440651|gb|EAS65831.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Vibrio angustum S14]
          Length = 357

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI F G  G GKTT +  + 
Sbjct: 27 INKGEFICFLGPSGCGKTTLLRAIA 51


>gi|15225886|ref|NP_180318.1| ATCOAE; ATP binding / dephospho-CoA kinase [Arabidopsis thaliana]
 gi|30683542|ref|NP_850102.1| ATCOAE; ATP binding / dephospho-CoA kinase [Arabidopsis thaliana]
 gi|4314391|gb|AAD15601.1| unknown protein [Arabidopsis thaliana]
 gi|110737255|dbj|BAF00575.1| hypothetical protein [Arabidopsis thaliana]
 gi|117168209|gb|ABK32187.1| At2g27490 [Arabidopsis thaliana]
 gi|330252908|gb|AEC08002.1| dephospho-CoA kinase [Arabidopsis thaliana]
 gi|330252909|gb|AEC08003.1| dephospho-CoA kinase [Arabidopsis thaliana]
          Length = 232

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 70/236 (29%), Gaps = 80/236 (33%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVH--------VTREPGGTP---AAEAARHVLLS 56
           G+ G   +GK+T  +L     +     V         V ++  G      A     +LL 
Sbjct: 5   GLTGGIASGKSTVSNL----FKASGIPVVDADVVARDVLKKGSGGWKRVVAAFGEEILLP 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G  +     + +  + ++   +  ++ P +  G                        +F
Sbjct: 61  SGEVDRPKLGQIVFSSDSKRQLLNKLMAPYISSG------------------------IF 96

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--------------------DIGLKRVQNRYSLRES 156
            + L++ +         I++D+P+                    +  LKR+  R  L E 
Sbjct: 97  WEILKQWASGA----KVIVVDIPLLFEVKMDKWTKPIVVVWVSQETQLKRLMERDGLSEE 152

Query: 157 ACLDY-FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              +    +  +             ++       ++D+  S   +      ++ E+
Sbjct: 153 DARNRVMAQMPLD---------SKRSKAD----VVIDNNGSLDDLHQQFEKVLIEI 195


>gi|21232600|ref|NP_638517.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767326|ref|YP_242088.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990402|ref|YP_001902412.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21114400|gb|AAM42441.1| ATP sulfurylase/adenylylsulfate kinase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572658|gb|AAY48068.1| ATP sulfurylase/adenylylsulfate kinase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732162|emb|CAP50354.1| Sulfate adenylyltransferase subunit 1 / adenylyl-sulfate kinase
           [Xanthomonas campestris pv. campestris]
          Length = 658

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             DS + +  
Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDSGEFVE- 589

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 590 --------VFVDVPLAVAEAR 602


>gi|59798088|sp|Q8FTK6|KCY_COREF RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
          Length = 230

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           GL I+ +G  G GK+T    L   L  K  D
Sbjct: 4  GGLIIAIDGPSGTGKSTTSRALATRLNAKYLD 35


>gi|328851612|gb|EGG00765.1| hypothetical protein MELLADRAFT_117975 [Melampsora larici-populina
           98AG31]
          Length = 200

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 58/212 (27%), Gaps = 40/212 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  GAGK T    L +  Q         +   ++  G+   +  +  +    +       
Sbjct: 17  GGPGAGKGTQCDRLVKDYQFVHLSAGDLLRAEQQREGSDYGKMIKEYITEGQIVPMEVTI 76

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           + +          EN I  AL  G      RFL   +             +D   +    
Sbjct: 77  KLL----------ENSIGEALKNGNH----RFLVDGF----------PRKMDQAIKFDED 112

Query: 127 EVMPDCTIILDLPVDIGLKRV------QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  + L  P    L R+        R    E +    F +  +         +   
Sbjct: 113 VCESSFVLFLTCPEQTLLDRLLERGKTSGRDDDNEESISKRF-KTFIATSMPVVDYY--- 168

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +  +   +DS+     V  +I + +   +
Sbjct: 169 --REKGKVVEIDSSVPIDEVYQHIKSAIDTRL 198


>gi|291557818|emb|CBL34935.1| guanylate kinase [Eubacterium siraeum V10Sc8a]
          Length = 209

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 66/214 (30%), Gaps = 39/214 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           MN GL I      G GK T +  L +        V   TR          + H   +   
Sbjct: 9   MNKGLPIVISAPSGCGKDTILEQLYKKNSNLTQSVSATTRAMREGEIDGVSYHFTTTDAF 68

Query: 60  DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++  A  E +    +        +  +   L +G+ ++                    L 
Sbjct: 69  EKMIANGEVLEYTQYCGNYYGTPKKAVTDMLEQGRDVI--------------------LK 108

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           ++    ++++++ P+C +I  LP       +R++ R +  E        +          
Sbjct: 109 IEVEGAMNIKKIFPECVLIFILPPSMSELERRLRKRGTETEETIAARIAQARNE------ 162

Query: 175 QIFLDIARNQPDRCHIVDS--AHSFQSVATNILN 206
              L  A        +V+     +   V T IL 
Sbjct: 163 ---LQFADKFD--YLVVNGELEKAVDDVNTVILA 191


>gi|260436134|ref|ZP_05790104.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
 gi|260414008|gb|EEX07304.1| conserved hypothetical protein [Synechococcus sp. WH 8109]
          Length = 179

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 20/86 (23%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G  G+GK+T   +L   L  +              A +A R   L    +     +E   
Sbjct: 13 GPPGSGKSTLARILSPRLPARVI------------ANDALRE-QLWGDANVQAPWSELEP 59

Query: 71 FAAARLDHVENVIRPALMEGKILLCD 96
                 H+   I  A+ +G  +L D
Sbjct: 60 -------HLHGAIDRAIADGDNVLVD 78


>gi|241667800|ref|ZP_04755378.1| signal recognition particle-docking protein FtsY [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 333

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 9/93 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGA 64
            I   G+ G GKTT I  L + LQ +   V +        AA E  R         +   
Sbjct: 131 LIV--GVNGVGKTTTIGKLTKKLQSEGKSVILAAGDTFRAAAVEQLREW-GDRNNTQVVY 187

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96
           + E     A     + + I  A   G  +++ D
Sbjct: 188 QKE----GADSASVIYDAISSAKSRGIDVVIAD 216


>gi|229086807|ref|ZP_04218970.1| Shikimate kinase [Bacillus cereus Rock3-44]
 gi|228696528|gb|EEL49350.1| Shikimate kinase [Bacillus cereus Rock3-44]
          Length = 165

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 58/196 (29%), Gaps = 44/196 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT   +L   L   +  V  T +       +  R +    G + F           
Sbjct: 11  GAGKTTIGRVLSEHL---HMPVVDTDQKIEEKQGKTIRDIFTREGENTFR---------- 57

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
                 E+ +  +L    +++            G     +      ++E           
Sbjct: 58  ----QYESEVMRSLPTSNVIITT----------GGGIVERAENRQWMKENGT-------V 96

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           + L     +  +R+    + R     D  E   V   E RR  + +           VD+
Sbjct: 97  VYLYCDPYVIAERLSG-DTTRPLFQKDNIEAF-VAKFEGRRAFYEEA-------MIQVDT 147

Query: 194 A-HSFQSVATNILNIV 208
              S Q +   IL+ +
Sbjct: 148 TNKSVQEITEEILHKI 163


>gi|225713736|gb|ACO12714.1| Guanylate kinase [Lepeophtheirus salmonis]
          Length = 226

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 16/162 (9%)

Query: 11  GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GK+T I  L   F     + V H TR P       +A H +    + +  ++ E 
Sbjct: 40  GPSGSGKSTLIKKLTAEFPTAFGFSVSHTTRSPRPGEVHGSAYHFVTREVMKDMLSKGE- 98

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
            +  A    ++      A+     ++ D   DS               +  + ++  + +
Sbjct: 99  FIENAEFSGNMYGTSFAAVES---VVSD---DSKICI----LDIDAQGVRQV-KVKEEFL 147

Query: 129 MPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMI 169
            P   + +++P  ++  +R+++R +  E +           I
Sbjct: 148 QP-LYVFINIPSMEVLEERLKSRNTETEESLARRMSAAKAEI 188


>gi|209965251|ref|YP_002298166.1| hypothetical protein RC1_1957 [Rhodospirillum centenum SW]
 gi|209958717|gb|ACI99353.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 518

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 34/205 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63
             ++  G+ G GK+T    L   +      V +         ++  R  LL         
Sbjct: 345 RLVAIGGLSGTGKSTLARWLAPEIGPAPGAVIL--------RSDGLRKRLLGVDERTRLP 396

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E+ +          +      AL     ++CD    + YA   +R + + +   + Q  
Sbjct: 397 PESYSEAVTGRVYAEIAGRAGLALESRHAVICD----AVYARAEQRAAIEAIARAAGQPF 452

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +         + L    +  L RV  R      A  D            RRQ   D+   
Sbjct: 453 AG--------LWLVADQETQLARVGERSGDASDATAD----------VVRRQGAYDLGEM 494

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
              R  I+ ++     VA     ++
Sbjct: 495 ---RWEIIPASGPPADVAAIARRLI 516


>gi|160934233|ref|ZP_02081620.1| hypothetical protein CLOLEP_03104 [Clostridium leptum DSM 753]
 gi|156866906|gb|EDO60278.1| hypothetical protein CLOLEP_03104 [Clostridium leptum DSM 753]
          Length = 319

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 28/87 (32%), Gaps = 8/87 (9%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT   +L++ L+ K                E    +L S   D    
Sbjct: 56  KVIMLSGPSGSGKTTTARILQKLLKEKGVSAVQIS-LDDFFMGEGKAPILDSGEYDYEDI 114

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK 91
                   A  L+ VEN +      G 
Sbjct: 115 R-------ALNLEQVENCLLDLSNRGY 134


>gi|156044979|ref|XP_001589045.1| hypothetical protein SS1G_09678 [Sclerotinia sclerotiorum 1980]
 gi|154694073|gb|EDN93811.1| hypothetical protein SS1G_09678 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 4951

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 21/93 (22%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            I  EG  G GKTT I+ L R   R                      + LS   D      
Sbjct: 1758 ILIEGSPGVGKTTLIAALARACNR------------------PLTRINLSEQTDLMDLFG 1799

Query: 67   EAIVFAAARLDHVENVIRPAL---MEGKILLCD 96
              +    A   H      P L     G+ +L D
Sbjct: 1800 SDVPVEGAEAGHFAWRDAPFLQAMQRGEWVLLD 1832


>gi|254373505|ref|ZP_04988992.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. novicida GA99-3549]
 gi|151571230|gb|EDN36884.1| signal recognition particle receptor FtsY [Francisella novicida
           GA99-3549]
          Length = 343

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R         +   + E  
Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTQVVYQHE-- 202

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 203 --GADSASVIYDAISSAKSKGIDVVIAD 228


>gi|116253094|ref|YP_768932.1| ATP-binding component of ABC transporter [Rhizobium leguminosarum
          bv. viciae 3841]
 gi|115257742|emb|CAK08840.1| putative ATP-binding component of ABC transporter [Rhizobium
          leguminosarum bv. viciae 3841]
          Length = 353

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FISF G  G GKTT + ++ 
Sbjct: 28 KGEFISFLGPSGCGKTTVLRMIA 50


>gi|150396228|ref|YP_001326695.1| adenylate kinase [Sinorhizobium medicae WSM419]
 gi|166980521|sp|A6U880|KAD_SINMW RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|150027743|gb|ABR59860.1| adenylate kinase [Sinorhizobium medicae WSM419]
          Length = 192

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 31/209 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T    L     R       T         +  R  +      E G  A+A
Sbjct: 5   FLGPPGAGKGTQAKHLTE---RYGIPQLST--------GDMLRAAV--AQATEVGKRAKA 51

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISV 125
           ++        V + I         ++ DR      A     D        ++   + +  
Sbjct: 52  VM---DAGQLVSDEIVNE------IVSDRIDAPDCAKGFILDGYPRTVPQAVALDRMLEE 102

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181
           + +  D  I L +     ++R++NR +   +A        +     +R Q + +    ++
Sbjct: 103 KNLKLDAVIELKVDEAALVRRMENRVAETVAAGGTVRSDDNPEAFRRRLQEYREKTAPLS 162

Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIV 208
            +     R   VD     ++V   I  I+
Sbjct: 163 EHYARTGRLKTVDGMADVKTVTAEIEKIL 191


>gi|118348706|ref|XP_001007828.1| ABC transporter family protein [Tetrahymena thermophila]
 gi|89289595|gb|EAR87583.1| ABC transporter family protein [Tetrahymena thermophila SB210]
          Length = 723

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           +  G FI+F G  G+GK+T I L++RF
Sbjct: 440 IKGGEFIAFAGTSGSGKSTIIKLIERF 466


>gi|58583019|ref|YP_202035.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58427613|gb|AAW76650.1| ATP sulfurylase; adenylylsulfate kinase [Xanthomonas oryzae pv.
           oryzae KACC10331]
          Length = 659

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 494 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 536

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 537 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 590

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 591 --------VFVDVPLAVAESR 603


>gi|13357902|ref|NP_078176.1| cytidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|167971808|ref|ZP_02554085.1| cytidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|168282571|ref|ZP_02690238.1| cytidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|168308726|ref|ZP_02691401.1| cytidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|170762244|ref|YP_001752425.1| cytidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|9910746|sp|Q9PQE9|KCY_UREPA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|189028399|sp|B1AIY1|KCY_UREP2 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|11279476|pir||C82903 cytidylate kinase UU342 [imported] - Ureaplasma urealyticum
 gi|6899321|gb|AAF30751.1|AE002131_5 cytidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
 gi|168827821|gb|ACA33083.1| cytidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|171902727|gb|EDT49016.1| cytidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|182675594|gb|EDT87499.1| cytidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186700900|gb|EDU19182.1| cytidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 224

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   + I+ +G  G+GK+T    L + L
Sbjct: 1  MKKYISIAIDGPSGSGKSTAAKELAKKL 28


>gi|16759738|ref|NP_455355.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. CT18]
 gi|29142489|ref|NP_805831.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. Ty2]
 gi|213163846|ref|ZP_03349556.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. E00-7866]
 gi|25307303|pir||AF0599 hypothetical ABC transporter ATP-binding protein ybhF [imported]
          - Salmonella enterica subsp. enterica serovar Typhi
          (strain CT18)
 gi|16502031|emb|CAD05264.1| hypothetical ABC transporter ATP-binding protein [Salmonella
          enterica subsp. enterica serovar Typhi]
 gi|29138120|gb|AAO69691.1| hypothetical ABC transporter ATP-binding protein [Salmonella
          enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 578

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61


>gi|19745617|ref|NP_606753.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS8232]
 gi|21909884|ref|NP_664152.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS315]
 gi|139474272|ref|YP_001128988.1| dephospho-CoA kinase [Streptococcus pyogenes str. Manfredo]
 gi|54036878|sp|P63834|COAE_STRP8 RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|54040908|sp|P63833|COAE_STRP3 RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|73918902|sp|Q5XDE3|COAE_STRP6 RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|19747745|gb|AAL97252.1| putative dephosphocoenzyme A kinase [Streptococcus pyogenes
           MGAS8232]
 gi|21904071|gb|AAM78955.1| putative kinase [Streptococcus pyogenes MGAS315]
 gi|134272519|emb|CAM30782.1| dephospho-CoA kinase [Streptococcus pyogenes str. Manfredo]
          Length = 197

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 72/226 (31%), Gaps = 44/226 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH-----V 53
           + I   G   +GK+T + ++    ++  Y       V    +  G    EA R      +
Sbjct: 1   MIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFGNQI 56

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           L + G  +    +E +      +         +I+  L   +             +  + 
Sbjct: 57  LKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HLAQS 104

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         +    
Sbjct: 105 QAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ---- 159

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   L I   +P    ++D+    +++   + + +  L   R
Sbjct: 160 --------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 197


>gi|15669728|ref|NP_248541.1| ATPase [Methanocaldococcus jannaschii DSM 2661]
 gi|48474791|sp|Q58928|Y1533_METJA RecName: Full=KH domain-containing protein MJ1533
 gi|1592164|gb|AAB99554.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 642

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+F+S  G  G+GK+T ++ L  F + +   V     P     ++  
Sbjct: 286 GIFVS--GPPGSGKSTFVAALAEFYRSQGKIVKTMESPRDLQVSKEI 330


>gi|87306826|ref|ZP_01088972.1| hypothetical protein DSM3645_00195 [Blastopirellula marina DSM
           3645]
 gi|87290199|gb|EAQ82087.1| hypothetical protein DSM3645_00195 [Blastopirellula marina DSM
           3645]
          Length = 284

 Score = 37.7 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 31/115 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           FEG +GAGK + I  +   L  +   +    +P  T   +                    
Sbjct: 63  FEGRDGAGKGSTIKRISERLNPRGCRIVALNKPSDTEQTQW------------------- 103

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +    + H+          G+I+L DR   S Y   G          +   E 
Sbjct: 104 --YFQRYVAHLP-------SAGEIVLMDR---SWYNRAGVERVMGFCTDEQYHEF 146


>gi|330891336|gb|EGH23997.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 354

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 155 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 210

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 211 TGADSASVIFDAVQAAKARGIDVLIAD 237


>gi|315638911|ref|ZP_07894083.1| guanylate kinase [Campylobacter upsaliensis JV21]
 gi|315481129|gb|EFU71761.1| guanylate kinase [Campylobacter upsaliensis JV21]
          Length = 205

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 17/105 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAA---------EAAR 51
            G  +   G  GAGK+T +  L    + + Y      TR P               E  +
Sbjct: 2   RGFILLISGPSGAGKSTLLKKLFEEFKDELYFSISSTTRTPRDGEINGVHYHFISQEEFQ 61

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           + + +    E+    E     + R  H       AL EGKI++ D
Sbjct: 62  NGIKNGDFLEWARVHENFYGTSLR--HTNK----ALDEGKIVIFD 100


>gi|237747264|ref|ZP_04577744.1| ABC transport system ATP-binding protein [Oxalobacter formigenes
          HOxBLS]
 gi|229378615|gb|EEO28706.1| ABC transport system ATP-binding protein [Oxalobacter formigenes
          HOxBLS]
          Length = 267

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 21/39 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G  ++  G  G+GKTT + L+   L  KN +V V  EP
Sbjct: 29 RGKVVAIMGGSGSGKTTILRLIGGQLIPKNGEVIVDGEP 67


>gi|221070041|ref|ZP_03546146.1| ABC transporter related [Comamonas testosteroni KF-1]
 gi|220715064|gb|EED70432.1| ABC transporter related [Comamonas testosteroni KF-1]
          Length = 270

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G F++  G  G GK+T + ++   L+  +  + + R+P
Sbjct: 40 GEFVTLLGPSGCGKSTLLKMVAGLLEPSDGRLLLWRKP 77


>gi|254780240|ref|YP_003064653.1| adenylate kinase [Candidatus Liberibacter asiaticus str. psy62]
 gi|254039917|gb|ACT56713.1| adenylate kinase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 201

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 66/239 (27%), Gaps = 75/239 (31%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  G+GK T    L + L                   +  R  +            
Sbjct: 3   IIFLGPPGSGKGTQACRLSQKL-----------NVPQLSTGDMLRAEV------------ 39

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI--------LLCDRF----LDSSYAYQGERDSSQH 114
                   R   +   ++ ++  G +        ++CDR      DS +   G   +   
Sbjct: 40  -------DRNTLLGKQVKGSMESGSLISDAIVNQVVCDRIRLPDCDSGFILDGYPRTVDQ 92

Query: 115 LFLDSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNR-----YSLRESACLDYFERKDVM 168
               SL       +   D  I L +      KR+Q R      S +     D ++     
Sbjct: 93  A--KSLHAFISNMDCAIDAVIELRVEDASMFKRIQVRVLEAIASEKSVRSDDKYD----- 145

Query: 169 IHEKRRQIFLDIARNQPDRCH-------------IVDSAHSFQSVATNILNIVWELVQK 214
                  +FL    N                   I+D       V+ +I +++  + +K
Sbjct: 146 -------VFLKRIENYRKTILPLSSYYRDMGCLYIIDGMLDMDEVSRSIDSLLVSVRKK 197


>gi|196232528|ref|ZP_03131380.1| Adenylyl-sulfate kinase [Chthoniobacter flavus Ellin428]
 gi|196223290|gb|EDY17808.1| Adenylyl-sulfate kinase [Chthoniobacter flavus Ellin428]
          Length = 210

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 48/155 (30%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I   G+ G+GKTT  + L+R L++    V                  +L       
Sbjct: 30  TGAIIWLTGLSGSGKTTIATALERALRQACRGVC-----------------VLDGDELRR 72

Query: 63  GAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC--------DRFLDSSYAYQGERDS 111
              ++       R ++V     + R     G +++         DR           R  
Sbjct: 73  SVNSDLGFSPEDRAENVRRVAEIARLMAQAGLMVVVALISPFHKDRH--------QARSV 124

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +    +D ++            + LD P++I  +R
Sbjct: 125 AAASGIDFIE------------VYLDCPLEICERR 147


>gi|145522606|ref|XP_001447147.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414647|emb|CAK79750.1| unnamed protein product [Paramecium tetraurelia]
          Length = 600

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 25/41 (60%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           +NSG  +  +G  G+GKTT ++LL + L   + ++ +  EP
Sbjct: 410 INSGEIVLLQGPSGSGKTTALNLLTKLLTPSSGEIVIDGEP 450


>gi|70729885|ref|YP_259624.1| hypothetical protein PFL_2517 [Pseudomonas fluorescens Pf-5]
 gi|68344184|gb|AAY91790.1| conserved domain protein [Pseudomonas fluorescens Pf-5]
          Length = 208

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
          + I F G+ G GKTT    L   L  
Sbjct: 44 MLIVFSGLPGTGKTTIARTLAPHLAA 69


>gi|289615560|emb|CBI57693.1| unnamed protein product [Sordaria macrospora]
          Length = 1270

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 14/123 (11%)

Query: 20  HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHV 79
            + LL    +  + ++ +T       A+   +  L S  +  FG++   +  AA RL  +
Sbjct: 825 QVDLLAENSEEASDEITITSYEDVVRASRVEKFALRSVPL--FGSQEYELDHAADRLIAI 882

Query: 80  ENVIR--PALMEGKILLCD----RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             ++R    L E +  L D    RFL ++  Y G R+      +++L      + M D  
Sbjct: 883 STILRNLSFLEENQACLADESVIRFLCNTIRYLGTREMLLRTQVNTL------DFMKDLV 936

Query: 134 IIL 136
           I+L
Sbjct: 937 ILL 939


>gi|255037144|ref|YP_003087765.1| signal recognition particle protein [Dyadobacter fermentans DSM
           18053]
 gi|254949900|gb|ACT94600.1| signal recognition particle protein [Dyadobacter fermentans DSM
           18053]
          Length = 440

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G+GKTT    L   L+++   V +T      PAA     VL     ++ G E 
Sbjct: 102 ILIAGLQGSGKTTFSGKLASLLKKQGRQVLLTACDVYRPAAIDQLKVL----GEQIGVEV 157

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            +       +   +N +  A   G KI++ D            R +   + +  +++I  
Sbjct: 158 YSEPENKNAVSIAQNAVSHAKKSGKKIVIVD---------TAGRLAVDEVMMKEVEDIKT 208

Query: 126 QEVMP 130
             V P
Sbjct: 209 -SVKP 212


>gi|254440309|ref|ZP_05053803.1| ABC transporter, ATP-binding protein [Octadecabacter antarcticus
          307]
 gi|198255755|gb|EDY80069.1| ABC transporter, ATP-binding protein [Octadecabacter antarcticus
          307]
          Length = 254

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
            G FIS  G  G GK+T + L+   L+
Sbjct: 32 RGGDFISLLGPSGCGKSTALRLIADLLK 59


>gi|197105726|ref|YP_002131103.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase
           cysN/C [Phenylobacterium zucineum HLK1]
 gi|196479146|gb|ACG78674.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase
           cysN/C [Phenylobacterium zucineum HLK1]
          Length = 634

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  +    +                 LL       G   + 
Sbjct: 465 FTGLSGAGKSTIANLVEKRLHAEGRHTY-----------------LLDGDNVRHGLNKDL 507

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V +  +  G I+L      S  +            +   +E   
Sbjct: 508 GFTEEDRVENIRRVAEVSKLMVDAGLIVLV-----SFISPFRAERRMARELMGE-REFVE 561

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D P++   +R
Sbjct: 562 --------VFVDTPLEEAERR 574


>gi|182625405|ref|ZP_02953178.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens D str. JGS1721]
 gi|177909402|gb|EDT71854.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium
           perfringens D str. JGS1721]
          Length = 227

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 17/139 (12%)

Query: 94  LCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQEVMPDCTIILDLPVDIGLKR 146
           + DR +     +         + ++        L+ +      P   + L++ VD  +KR
Sbjct: 97  VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHVKAPKLMVYLEISVDEAMKR 156

Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVDSA-HSFQSVATNI 204
           +Q R    E       ER+     EK    + +   N        ++     F++V  + 
Sbjct: 157 IQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVSPILRINVDELDFENVPED- 208

Query: 205 LNIVWELVQKRVSPLSSKK 223
              V  L+ +++S L + K
Sbjct: 209 REYVLNLIDEKLSELENNK 227


>gi|84624854|ref|YP_452226.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|21105250|gb|AAM34571.1|AF389910_2 RaxQ [Xanthomonas oryzae pv. oryzae]
 gi|84368794|dbj|BAE69952.1| ATP sulfurylase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 658

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 590 --------VFVDVPLAVAESR 602


>gi|62290900|ref|YP_222693.1| ABC transporter ATP-binding protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82700811|ref|YP_415385.1| ABC transporter ATPase [Brucella melitensis biovar Abortus 2308]
 gi|189025113|ref|YP_001935881.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
 gi|237816406|ref|ZP_04595399.1| ABC transporter, ATP-binding protein [Brucella abortus str. 2308 A]
 gi|254696304|ref|ZP_05158132.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731221|ref|ZP_05189799.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus bv. 4 str.
           292]
 gi|260546161|ref|ZP_05821901.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC
           8038]
 gi|260758953|ref|ZP_05871301.1| ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260760675|ref|ZP_05873018.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|62197032|gb|AAX75332.1| ABC transporter, ATP-binding protein [Brucella abortus bv. 1 str.
           9-941]
 gi|82616912|emb|CAJ12013.1| ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase
           [Brucella melitensis biovar Abortus 2308]
 gi|189020685|gb|ACD73407.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
 gi|237788473|gb|EEP62688.1| ABC transporter, ATP-binding protein [Brucella abortus str. 2308 A]
 gi|260096268|gb|EEW80144.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC
           8038]
 gi|260669271|gb|EEX56211.1| ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260671107|gb|EEX57928.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|281358609|ref|ZP_06245088.1| AAA ATPase central domain protein [Victivallis vadensis ATCC
          BAA-548]
 gi|281314957|gb|EFA98991.1| AAA ATPase central domain protein [Victivallis vadensis ATCC
          BAA-548]
          Length = 173

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 5/67 (7%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
             LFI+  G+ G GKTT    L +     +L+    +V   R    +         +++
Sbjct: 10 RKPLFITLAGLPGTGKTTLAKSLAKKLSLVYLRLDCIEVPFCRYNATSGLKGEGYDAIVN 69

Query: 57 CGVDEFG 63
             +   
Sbjct: 70 LARENLN 76


>gi|260886717|ref|ZP_05897980.1| guanylate kinase [Selenomonas sputigena ATCC 35185]
 gi|330839457|ref|YP_004414037.1| guanylate kinase [Selenomonas sputigena ATCC 35185]
 gi|260863569|gb|EEX78069.1| guanylate kinase [Selenomonas sputigena ATCC 35185]
 gi|329747221|gb|AEC00578.1| guanylate kinase [Selenomonas sputigena ATCC 35185]
          Length = 205

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 23/69 (33%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M  GL +   G  GAGK T    L             TR+P        + + L     +
Sbjct: 1  MRKGLLVVVSGPSGAGKGTICQALLEKTPLAYSVSATTRKPRAGEVDGESYYFLSVEAFE 60

Query: 61 EFGAEAEAI 69
          +   + E +
Sbjct: 61 KMIEKDELL 69


>gi|227545446|ref|ZP_03975495.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri CF48-3A]
 gi|300908470|ref|ZP_07125933.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri SD2112]
 gi|227184587|gb|EEI64658.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri CF48-3A]
 gi|300893877|gb|EFK87235.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Lactobacillus reuteri SD2112]
          Length = 460

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G+ G+GK+T + L+   L +   ++       P         +  L+   +D    E E 
Sbjct: 36  GVSGSGKSTILKLIAGLLPKYGGEIVAGAVDVPTDAHIGMVFQDPLMQFALDTPRHELEF 95

Query: 69  IVFAAAR-LDHVENVIRPALMEGKI 92
            +       D +   ++ AL  GK+
Sbjct: 96  TLENCQVPTDKIPERVKEALQFGKV 120


>gi|227488055|ref|ZP_03918371.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
          ATCC 51867]
 gi|227541451|ref|ZP_03971500.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
          ATCC 51866]
 gi|227091917|gb|EEI27229.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
          ATCC 51867]
 gi|227182733|gb|EEI63705.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
          ATCC 51866]
          Length = 194

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 11/61 (18%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--------VTREPGGTPAAEAARHVLLS 56
           FI+ +G  GAGK+T  + +   L      V          +R        +     LL 
Sbjct: 23 RFIAIDGRGGAGKSTLAARVAEHL---GAPVVHVDDVSWNYSRFDWADELKKGIVDPLLR 79

Query: 57 C 57
           
Sbjct: 80 G 80


>gi|218134716|ref|ZP_03463520.1| hypothetical protein BACPEC_02619 [Bacteroides pectinophilus ATCC
          43243]
 gi|217990101|gb|EEC56112.1| hypothetical protein BACPEC_02619 [Bacteroides pectinophilus ATCC
          43243]
          Length = 350

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F++  G  G GKTT + LL  FL+
Sbjct: 28 GEFVAILGPSGCGKTTLLRLLAGFLK 53


>gi|208434112|ref|YP_002265778.1| shikimic acid kinase I [Helicobacter pylori G27]
 gi|238058102|sp|B5Z9T2|AROK_HELPG RecName: Full=Shikimate kinase; Short=SK
 gi|208432041|gb|ACI26912.1| shikimic acid kinase I [Helicobacter pylori G27]
          Length = 162

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+ N+    +   L+   +   +  EKR+ ++   A        I+D+
Sbjct: 95  FYLKIDFETLIKRL-NQKEREKRPLLNNLTQAKELF-EKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|197301829|ref|ZP_03166899.1| hypothetical protein RUMLAC_00556 [Ruminococcus lactaris ATCC
           29176]
 gi|296451587|ref|ZP_06893322.1| conserved hypothetical protein [Clostridium difficile NAP08]
 gi|197299269|gb|EDY33799.1| hypothetical protein RUMLAC_00556 [Ruminococcus lactaris ATCC
           29176]
 gi|296259652|gb|EFH06512.1| conserved hypothetical protein [Clostridium difficile NAP08]
          Length = 181

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 25/163 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S++ +     +  VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGSPGTGKTTTASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL+  
Sbjct: 60  QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           + +  ++      I+L    +  +KR   R  L     ++  E
Sbjct: 97  RALVREDYEVHY-IVLRASKEETMKRAVERSKLDRKTNVELVE 138


>gi|188585994|ref|YP_001917539.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350681|gb|ACB84951.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 447

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 33/163 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G GKTT  + L +  ++   +  +       PAA     VL        G + 
Sbjct: 103 IMLSGLQGTGKTTASAKLAKKFKKDGKNPLMVACDTQRPAAIKQLQVL--------GEQT 154

Query: 67  EAIVFAAARLDHVENVIRPALMEGK-----ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  VF+     H  ++ + A+   K     +++ D            R       +  L+
Sbjct: 155 DIPVFSMGDKQHPADIAKGAVEHAKKNQMDVVILD---------TAGRLHIDEDLMTELR 205

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           E+    V P   I+L +    G                + F++
Sbjct: 206 EVES-SVEPH-EILLVVDAMTGQ---------DAVNVAERFDQ 237


>gi|72163024|ref|YP_290681.1| adenylate kinase [Thermobifida fusca YX]
 gi|123628781|sp|Q47LL4|KAD_THEFY RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|71916756|gb|AAZ56658.1| Adenylate kinase [Thermobifida fusca YX]
          Length = 189

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 39/213 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK T   +L   L                   +  R  +   G  E G +A
Sbjct: 3   VVLVGPPGAGKGTQAQILASKLS-----------IPKVSTGDIFRANV--SGGTELGKKA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL----QE 122
           +A +    R D V + I  A++       DR  +   A  G         L       + 
Sbjct: 50  QAYM---DRGDLVPDEITNAMVR------DRLAEDD-ARAGFLLDGFPRNLAQAETLDEM 99

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD--- 179
           ++   V  D  + L +  +  ++R+  R  +   +     + ++ + H     ++ +   
Sbjct: 100 LADLGVKLDVVLELVVDEEEVIRRLAERARIDNRSD----DNEETIRHRLV--VYREQTA 153

Query: 180 -IARNQPDRCHI--VDSAHSFQSVATNILNIVW 209
            +      R  +  +D+    + V    +  + 
Sbjct: 154 PLVSFYEKRGLLEKIDAVGPIEEVTQRAMTALK 186


>gi|327310666|ref|YP_004337563.1| PilT protein domain-containing protein [Thermoproteus uzoniensis
           768-20]
 gi|326947145|gb|AEA12251.1| PilT protein domain protein [Thermoproteus uzoniensis 768-20]
          Length = 518

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 16/47 (34%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I   G  GAGKTT    L  F   K   V     P     + +   +
Sbjct: 260 ILISGPPGAGKTTFAQALAEFYLSKGKIVKTVESPRDMILSRSITQL 306


>gi|304405111|ref|ZP_07386771.1| ABC transporter related protein [Paenibacillus curdlanolyticus
          YK9]
 gi|304345990|gb|EFM11824.1| ABC transporter related protein [Paenibacillus curdlanolyticus
          YK9]
          Length = 319

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 29/69 (42%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
          G  ++  G  GAGKTT I +L   L+     +H   E  G        ++  +     + 
Sbjct: 30 GRCVALLGPNGAGKTTTIRMLTGLLRPTGGSIHFQGEKAGEDIRRYIGYLPQTPSYYGWM 89

Query: 64 AEAEAIVFA 72
          +  E +++A
Sbjct: 90 SGEELLIYA 98


>gi|269794813|ref|YP_003314268.1| hypothetical protein Sked_14980 [Sanguibacter keddieii DSM 10542]
 gi|269096998|gb|ACZ21434.1| uncharacterized conserved protein [Sanguibacter keddieii DSM 10542]
          Length = 305

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK + I  + ++L  ++  V     P     ++                  
Sbjct: 78  IVFEGRDAAGKGSAIKRVTQYLNSRHVRVAALPAPTERQKSQW----------------- 120

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                      + +  +      G+I+L DR   
Sbjct: 121 -----------YFQKYVEHLPAAGEIVLFDRSWY 143


>gi|91200634|emb|CAJ73684.1| strongly similar to general secretory system type II protein,
           ATPase component [Candidatus Kuenenia stuttgartiensis]
          Length = 571

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 1   MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           M +G+F I+  G  G+GKTT +  +   L +    +    +P
Sbjct: 319 MPNGIFLIT--GPTGSGKTTTLYAIINELNQTGVKIVTAEDP 358


>gi|319645499|ref|ZP_07999731.1| YfiC protein [Bacillus sp. BT1B_CT2]
 gi|317392385|gb|EFV73180.1| YfiC protein [Bacillus sp. BT1B_CT2]
          Length = 607

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 8/48 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARH 52
           I+  G  GAGKTT I+LL RF  L + +  V      GGT  +E +R 
Sbjct: 393 IAIVGPTGAGKTTIINLLMRFYELNKGSIKV------GGTDISELSRE 434


>gi|308069680|ref|YP_003871285.1| Guanylate kinase (GMP kinase) [Paenibacillus polymyxa E681]
 gi|305858959|gb|ADM70747.1| Guanylate kinase (GMP kinase) [Paenibacillus polymyxa E681]
          Length = 190

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 15/38 (39%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M  GL     G  G GK T  + L+  L    Y V  T
Sbjct: 1  MAKGLLFVISGPSGVGKGTVGNALRDKLPEITYSVSAT 38


>gi|307728322|ref|YP_003905546.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia sp. CCGE1003]
 gi|307582857|gb|ADN56255.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia sp. CCGE1003]
          Length = 356

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+F G  G GKTT + ++ 
Sbjct: 28 RGEFITFLGPSGCGKTTVLRMIA 50


>gi|289192233|ref|YP_003458174.1| PilT protein domain protein [Methanocaldococcus sp. FS406-22]
 gi|288938683|gb|ADC69438.1| PilT protein domain protein [Methanocaldococcus sp. FS406-22]
          Length = 637

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+F+S  G  G+GK+T ++ L  F + +   V     P     ++  
Sbjct: 281 GIFVS--GPPGSGKSTFVAALAEFYRSQGKIVKTMESPRDLQVSKEI 325


>gi|261402191|ref|YP_003246415.1| adenylylsulfate kinase [Methanocaldococcus vulcanius M7]
 gi|261369184|gb|ACX71933.1| adenylylsulfate kinase [Methanocaldococcus vulcanius M7]
          Length = 173

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV 35
          G  GAGKTT    LK   +   Y+V
Sbjct: 10 GPSGAGKTTLARALKNRFKEMGYNV 34


>gi|238651027|ref|YP_002916884.1| signal recognition particle protein [Rickettsia peacockii str.
           Rustic]
 gi|238625125|gb|ACR47831.1| signal recognition particle protein [Rickettsia peacockii str.
           Rustic]
          Length = 449

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  S L   L  +N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASSKLALRLSNQNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|284040383|ref|YP_003390313.1| guanylate kinase [Spirosoma linguale DSM 74]
 gi|283819676|gb|ADB41514.1| guanylate kinase [Spirosoma linguale DSM 74]
          Length = 199

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 65/223 (29%), Gaps = 40/223 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARHVLL 55
           G  I F    G+GKTT +  L        + +            E G             
Sbjct: 3   GKLIIFSAPSGSGKTTIVKHLLAENNNLGFSISACTRDRRGRAEENGKDYYFLTPEEFKQ 62

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
               DEF    E   +  A    +++ I      GK +L D  +D        +   +  
Sbjct: 63  RIDNDEFVEWEEV--YVGAFYGTLKSEIERLWKSGKHVLFD--VD-------VQGGLKLK 111

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                + ++V   +PD         +   +R+  R S  E +      +    +      
Sbjct: 112 EYYGDKALAVFVKVPD--------EETLRQRLIGRGSETEESLSKRLFKVHFEM------ 157

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
                  +  DR  +V      ++       +V + V++   P
Sbjct: 158 -------SFQDRFDVVLVNDDLETSLQKAQKLVDDFVRENKVP 193


>gi|242310435|ref|ZP_04809590.1| adenylate kinase [Helicobacter pullorum MIT 98-5489]
 gi|239522833|gb|EEQ62699.1| adenylate kinase [Helicobacter pullorum MIT 98-5489]
          Length = 190

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 74/224 (33%), Gaps = 46/224 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   LF+   G  G+GKTT   ++     + N +  V          E  R  + S    
Sbjct: 1   MKK-LFLVI-GAPGSGKTTDAEII----SKNNTESIV-----HYSTGELLRAEVASGSEK 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLD 118
               ++         L+ V   I  A+      I++ D +          R   Q L LD
Sbjct: 50  GKLIDSYTSKGNLVPLEIVVQTIVDAISNAPKDIVIIDGY---------PRSVEQMLELD 100

Query: 119 SL----QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
            +      I++  V         + V++  K   +R   R     D     +V +   R 
Sbjct: 101 KILKGTNNITLANV---------IEVEVSEKVACDRVLGRARGADD-----NVEVFNNRM 146

Query: 175 QIFLD-IARNQ-----PDRCHIVDSAHSFQSVATNILNIVWELV 212
           +++L+ +A  Q         H ++   + + +   +   +   +
Sbjct: 147 KVYLEPLAEIQEFYSVKGILHKINGERTIEEIVAEMEAFIKSRI 190


>gi|161213733|gb|ABX60164.1| adenylylsulfate kinase [Cylindrospermopsis raciborskii AWT205]
          Length = 199

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GKTT    L+R L +K +    T               +L       G  A+ 
Sbjct: 31  FTGLSGSGKTTLALELERILFQKGW---YTF--------------VLDGDNIRHGLCADL 73

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              AA R +++     V +     G +++ 
Sbjct: 74  GFSAADRAENIRRIGEVAKLFADSGCLVIT 103


>gi|145343657|ref|XP_001416431.1| deoxyribonucleoside kinase, putative [Ostreococcus lucimarinus
           CCE9901]
 gi|144576656|gb|ABO94724.1| deoxyribonucleoside kinase, putative [Ostreococcus lucimarinus
           CCE9901]
          Length = 303

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 22/175 (12%)

Query: 9   FEGIEGAGKTTHISLL---KRFLQRKNYDVHVTREPGGTPAAEAARHV------LLSCGV 59
            EG   +GK+T +S +      L+     V+   EP  +  +   +        LL    
Sbjct: 53  VEGNISSGKSTFLSEVLSSASRLEDL---VYTVPEPVQSWQSVPRKSASNPPHNLLKEFY 109

Query: 60  DEFGAEAEAIVFAAARLDHVENVI-----RPALMEGKILLCDRFLDSSYAY-QGERDSSQ 113
                 A           +++        +   +  + +  DR +     + QG     +
Sbjct: 110 TNPERYAYVFQNYVFMTRYLQERQSAGTSKLLRITERSVFSDRNVFVESVHEQGWLSELE 169

Query: 114 HLFLD-SLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164
               +  L  +  ++  ++PD  I L +  D+ ++R+Q R    E    L+Y E 
Sbjct: 170 ADLYNAWLYPMINALPSLIPDGFIYLRVEPDVCMERLQRRARGEELNITLEYLES 224


>gi|118443502|ref|YP_878159.1| iron compound ABC transporter, ATP-binding protein [Clostridium
          novyi NT]
 gi|118133958|gb|ABK61002.1| iron compound ABC transporter, ATP-binding protein [Clostridium
          novyi NT]
          Length = 261

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F S  G  G+GKTT I  + + L+ KN  + +
Sbjct: 31 RGKFYSIIGPNGSGKTTLIKNICKILEGKNGHIFI 65


>gi|187922524|ref|YP_001894166.1| spermidine/putrescine ABC transporter ATPase [Burkholderia
          phytofirmans PsJN]
 gi|187713718|gb|ACD14942.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia phytofirmans PsJN]
          Length = 356

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+F G  G GKTT + ++ 
Sbjct: 28 RGEFITFLGPSGCGKTTVLRMIA 50


>gi|111223084|ref|YP_713878.1| uridine kinase [Frankia alni ACN14a]
 gi|111150616|emb|CAJ62317.1| putative kinase [Frankia alni ACN14a]
          Length = 235

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          ++ +G + AGKTT    L   + R+   V 
Sbjct: 33 VAIDGPDAAGKTTLADELADAVTRRGRPVV 62


>gi|110679865|ref|YP_682872.1| guanylate kinase, putative [Roseobacter denitrificans OCh 114]
 gi|119371281|sp|Q166A7|KGUA_ROSDO RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|109455981|gb|ABG32186.1| guanylate kinase, putative [Roseobacter denitrificans OCh 114]
          Length = 211

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          M  GL I      GAGK+T    L+ +
Sbjct: 1  MRRGLLIILSSPSGAGKSTLARRLRDW 27


>gi|37595570|gb|AAQ94626.1| unknown [Arcanobacterium pyogenes]
 gi|104303736|gb|ABF72133.1| unknown [Arcanobacterium pyogenes]
 gi|145308138|gb|ABP57324.1| hypothetical protein bst057 [Bacteroides uniformis]
          Length = 181

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 78/221 (35%), Gaps = 41/221 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S++ +     +  VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGSPGTGKTTTASIVAKE-SDMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL+  
Sbjct: 60  QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           + +  +       IIL    +  LKR   R      + LD   + ++ + E   + F ++
Sbjct: 97  KALVREHYEVHY-IILRASKEETLKRAVER------SKLDR--KTNIELVETMWEQFCNL 147

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220
              + +   +VD+ + S        ++ V E +  R + LS
Sbjct: 148 GIYESN---VVDTTNYSI----QETVSAVQEKIASRAALLS 181


>gi|322392524|ref|ZP_08065984.1| excision endonuclease subunit UvrA [Streptococcus peroris ATCC
           700780]
 gi|321144516|gb|EFX39917.1| excision endonuclease subunit UvrA [Streptococcus peroris ATCC
           700780]
          Length = 943

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G FI+  G+ G+GK+T I       + + L R +      +   G    +    +
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRNSDKPGKFKNITGIEHIDRLIDI 688


>gi|320586313|gb|EFW98992.1| ABC multidrug transporter mdr1 [Grosmannia clavigera kw1407]
          Length = 889

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           SG +I+  G  G+GK+T ISLL+RF    +  V  
Sbjct: 789 SGKYIALVGSSGSGKSTIISLLERFFDPDDGQVFF 823


>gi|307946737|ref|ZP_07662072.1| guanylate kinase [Roseibium sp. TrichSKD4]
 gi|307770401|gb|EFO29627.1| guanylate kinase [Roseibium sp. TrichSKD4]
          Length = 234

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL +      GAGK+T   LL       +  + VT  P  +   +   +  L     +
Sbjct: 22  RRGLMLVLSSPSGAGKSTIARLLLEKETNLSLSISVTTRPRRSSEVDGVHYHFLDNARFD 81

Query: 62  FGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCD 96
              E + ++  A   ++    +   +  AL  G+ +L D
Sbjct: 82  QMKEHDELLEWAQVHENYYATLRRPVEDALEAGQDVLFD 120


>gi|307306337|ref|ZP_07586081.1| shikimate kinase [Sinorhizobium meliloti BL225C]
 gi|307319224|ref|ZP_07598653.1| shikimate kinase [Sinorhizobium meliloti AK83]
 gi|306895060|gb|EFN25817.1| shikimate kinase [Sinorhizobium meliloti AK83]
 gi|306902179|gb|EFN32776.1| shikimate kinase [Sinorhizobium meliloti BL225C]
          Length = 171

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I   G+ G+GKTT    L + L+  +  V
Sbjct: 1  MLIILGGLPGSGKTTIARALAKRLRAVHVRV 31


>gi|301156054|emb|CBW15525.1| polyamine transporter subunit [Haemophilus parainfluenzae T3T1]
          Length = 371

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 32 INNGEFVTILGPSGCGKTTVLRLLA 56


>gi|295115040|emb|CBL35887.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase
          component [butyrate-producing bacterium SM4/1]
          Length = 258

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M SG FIS  G  G GK+T + L+ 
Sbjct: 36 MESGEFISLVGPSGCGKSTILRLVA 60


>gi|289672445|ref|ZP_06493335.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. syringae FF5]
          Length = 339

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 140 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 195

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 196 TGADSASVIFDAVQAAKARGIDVLIAD 222


>gi|323524612|ref|YP_004226765.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia sp. CCGE1001]
 gi|323381614|gb|ADX53705.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia sp. CCGE1001]
          Length = 356

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+F G  G GKTT + ++ 
Sbjct: 28 RGEFITFLGPSGCGKTTVLRMIA 50


>gi|289192210|ref|YP_003458151.1| protein of unknown function DUF265 [Methanocaldococcus sp.
           FS406-22]
 gi|288938660|gb|ADC69415.1| protein of unknown function DUF265 [Methanocaldococcus sp.
           FS406-22]
          Length = 177

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 37/103 (35%), Gaps = 16/103 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTRE--PGGTPAAEAARHVLLSCGVDE 61
           FI+  G+ G GKTT    +   L+   Y V   +T+E    G         + L    + 
Sbjct: 4   FIT--GMPGVGKTTLALKIAEKLKDFGYKVGGFITKEIRKNGKRVGFKI--ITLDTNEEA 59

Query: 62  FGAEA--------EAIVFAAARLDHVENVIRPALMEGKILLCD 96
             A          + +VF           I+ AL +  I++ D
Sbjct: 60  ILAYVGDGNVKVGKYVVFVENLDKVGVEAIKRALKDADIIIID 102


>gi|289578345|ref|YP_003476972.1| cytidylate kinase [Thermoanaerobacter italicus Ab9]
 gi|289528058|gb|ADD02410.1| cytidylate kinase [Thermoanaerobacter italicus Ab9]
          Length = 221

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 81/234 (34%), Gaps = 41/234 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    L + L     D           A       +    + +     
Sbjct: 5   IAIDGPAGAGKSTVSKKLAKLLNYTYIDTGAMYRAITYKALHKGIKFIEEDKISDIAQST 64

Query: 67  EAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           +  +          D  E + +P + E   L+             +    + + +   +E
Sbjct: 65  DITLEGEKIFLDGKDISEEIRKPEVSEKVSLVS------------KIPKVREILVQKQRE 112

Query: 123 ISVQE------------VMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFER---- 164
           I+  +            V+PD      L   ++   KR + R    ++  + Y+E     
Sbjct: 113 IAKGKNVVMDGRDIGTVVLPDAQFKFFLTASLEERAKR-RYRELKTKNVNVSYYEVVKEI 171

Query: 165 KDVMIHEKRRQIF-LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRV 216
           ++    + +R+   L IA++      ++D+   S + V   + NI+ E ++  +
Sbjct: 172 ENRDTIDSQRETSPLKIAKDS----IVIDTTYLSEEEVVEKLYNIIKEGLKGEI 221


>gi|254718098|ref|ZP_05179909.1| ABC transporter related protein [Brucella sp. 83/13]
 gi|265983051|ref|ZP_06095786.1| ABC transporter [Brucella sp. 83/13]
 gi|264661643|gb|EEZ31904.1| ABC transporter [Brucella sp. 83/13]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|229029662|ref|ZP_04185738.1| Branched-chain amino acid ABC transporter, ATP-binding protein
           [Bacillus cereus AH1271]
 gi|228731666|gb|EEL82572.1| Branched-chain amino acid ABC transporter, ATP-binding protein
           [Bacillus cereus AH1271]
          Length = 281

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
             G  IS  G  GAGKTT  +LL   +     +V+   RE      ++  R
Sbjct: 52  QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGREITKLSISDRTR 102


>gi|218710703|ref|YP_002418324.1| adenylylsulfate kinase [Vibrio splendidus LGP32]
 gi|218323722|emb|CAV20071.1| Adenylylsulfate kinase [Vibrio splendidus LGP32]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +  Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGSGKSTVAGALENRLAQLGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|254167736|ref|ZP_04874586.1| cytidylate kinase, putative [Aciduliprofundum boonei T469]
 gi|289597167|ref|YP_003483863.1| cytidylate kinase [Aciduliprofundum boonei T469]
 gi|197623264|gb|EDY35829.1| cytidylate kinase, putative [Aciduliprofundum boonei T469]
 gi|289534954|gb|ADD09301.1| cytidylate kinase [Aciduliprofundum boonei T469]
          Length = 179

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 43/206 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT   +L + L    Y +            +  R +     +D      
Sbjct: 3   ITISGPPGSGKTTVAKILSKKL---GYKLI--------SGGDIFRDMAKEHNMDLVEFSK 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            A        +    +I  A     I+L               DS    +L  L  I   
Sbjct: 52  YAENNWDVDREIDRRLIEFAKENDNIIL---------------DSRLSGWLAYLNRI--- 93

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQI-FLDIA 181
              P   + ++  + + ++R+  R         +      E + +  ++K   I F D++
Sbjct: 94  ---PAFKVYVNASLPVRIERIWRREGGSFEKVKEETVYREESEKLR-YKKIYNIDFDDLS 149

Query: 182 RNQPDRCHIVDS-AHSFQSVATNILN 206
                   IVDS   + + +   I+ 
Sbjct: 150 IYD----LIVDSDNLTPEEITKIIME 171


>gi|206974523|ref|ZP_03235439.1| ABC transporter, ATP-binding protein [Bacillus cereus H3081.97]
 gi|206747166|gb|EDZ58557.1| ABC transporter, ATP-binding protein [Bacillus cereus H3081.97]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|160934305|ref|ZP_02081692.1| hypothetical protein CLOLEP_03176 [Clostridium leptum DSM 753]
 gi|156866978|gb|EDO60350.1| hypothetical protein CLOLEP_03176 [Clostridium leptum DSM 753]
          Length = 336

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
           SGL I+  G   +GKTT +  L R L  K   V V  E G
Sbjct: 161 SGLLIA--GPPSSGKTTILRDLARQLSIKGKKVVVIDERG 198


>gi|149371871|ref|ZP_01891190.1| Deoxynucleoside kinase subfamily, putative [unidentified
           eubacterium SCB49]
 gi|149355011|gb|EDM43572.1| Deoxynucleoside kinase subfamily, putative [unidentified
           eubacterium SCB49]
          Length = 204

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 52/162 (32%), Gaps = 27/162 (16%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT   LL +         H   +P      +          ++ +    +     +
Sbjct: 10  GSGKTTLTRLLAK---------HYKWKPQYEDVEDNPYLDDFYNAMERWSFNLQIYFLNS 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSS--------YAYQGERDSSQHLFLDSLQEI 123
                    I     +GK ++ DR  + D+               RD   +  L  L E 
Sbjct: 61  RFRQ-----ILEIREKGKKVIQDRTIYEDAYIFAPNLHAMGLMTNRDYENYKSLFDLMES 115

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164
             +   PD  I L   +   + ++  R    E++  +DY  R
Sbjct: 116 VTEG--PDLLIYLRSSIPNLVSQIHKRGREYENSISIDYLSR 155


>gi|145641352|ref|ZP_01796931.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae R3021]
 gi|145273895|gb|EDK13762.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus
          influenzae 22.4-21]
          Length = 339

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57


>gi|52080539|ref|YP_079330.1| ABC transporter [Bacillus licheniformis ATCC 14580]
 gi|52785918|ref|YP_091747.1| YfiC [Bacillus licheniformis ATCC 14580]
 gi|52003750|gb|AAU23692.1| ABC transporter [Bacillus licheniformis ATCC 14580]
 gi|52348420|gb|AAU41054.1| YfiC [Bacillus licheniformis ATCC 14580]
          Length = 607

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 8/48 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARH 52
           I+  G  GAGKTT I+LL RF  L + +  V      GGT  +E +R 
Sbjct: 393 IAIVGPTGAGKTTIINLLMRFYELNKGSIKV------GGTDISELSRE 434


>gi|530420|emb|CAA83737.1| ATP-bind. pyrimidine kinases [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 153

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 16/85 (18%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN----QPD 186
           D  I L +     + R++ R    E    D          E   + + +  +      P 
Sbjct: 74  DIVIYLRVSTKTAISRIKKRGRSEEPLIGD-------EYWETLNKNYEEFYKQNVYNFP- 125

Query: 187 RCHIVDSAHSFQSVATNILNIVWEL 211
              +VD+      V   I  I+ +L
Sbjct: 126 -FFVVDAELD---VKAQIELIMNKL 146


>gi|327542323|gb|EGF28810.1| cobalamin synthesis protein P47K [Rhodopirellula baltica WH47]
          Length = 368

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          FI   G  GAGKTT I+ L + LQ +   V V        A      +L S G++
Sbjct: 7  FIMIGGFLGAGKTTLIARLAKQLQAEGKHVCVVTN--DQAAGLVDTQLLKSQGLE 59


>gi|330844238|ref|XP_003294039.1| hypothetical protein DICPUDRAFT_51281 [Dictyostelium purpureum]
 gi|325075556|gb|EGC29428.1| hypothetical protein DICPUDRAFT_51281 [Dictyostelium purpureum]
          Length = 572

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I F G+ G GK+T+++ +  +L    Y   +
Sbjct: 367 IVFSGVNGVGKSTNLAKICYWLTANGYRCML 397


>gi|314938488|ref|ZP_07845774.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04]
 gi|314941022|ref|ZP_07847922.1| deoxynucleoside kinase [Enterococcus faecium TX0133C]
 gi|314950742|ref|ZP_07853819.1| deoxynucleoside kinase [Enterococcus faecium TX0133A]
 gi|314993788|ref|ZP_07859128.1| deoxynucleoside kinase [Enterococcus faecium TX0133B]
 gi|314997010|ref|ZP_07862003.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01]
 gi|313588879|gb|EFR67724.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01]
 gi|313591763|gb|EFR70608.1| deoxynucleoside kinase [Enterococcus faecium TX0133B]
 gi|313597071|gb|EFR75916.1| deoxynucleoside kinase [Enterococcus faecium TX0133A]
 gi|313600158|gb|EFR79001.1| deoxynucleoside kinase [Enterococcus faecium TX0133C]
 gi|313642182|gb|EFS06762.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04]
          Length = 233

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 48/238 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++   +L + +  K         P      +     L     +++    
Sbjct: 4   ILISGTIGAGKSSLTDMLAKEIDSK---------PFYENVEDNEVLPLFYSNPEQYAFLL 54

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLD------- 118
           +        L      ++ AL+    +L DR +   S  +    D  +   ++       
Sbjct: 55  QIFFLNKRFLA-----MKNALVNDDNVL-DRSIYEDSLLFHLNADLGRVTDIEVQQYDSL 108

Query: 119 ---SLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
               L E+     +  PD  + + + +D  L+R++ R    E    D          E  
Sbjct: 109 LDTMLNELDDVAPKKRPDLMVHIKVSLDTMLERIKKRGRDYEQLESD----------ETL 158

Query: 174 RQIFLDIARNQPDRC--------HIVDSAH-SFQSVATNILNIVWELVQKRVSPLSSK 222
              +  +                  VD     F     +   ++ + +Q++++ L  K
Sbjct: 159 YTYYETLNTRYNQWYEDFDVCPKIQVDGDKFDFVENPEDAKKVIHQ-IQEKLAELEGK 215


>gi|312891046|ref|ZP_07750570.1| adenylylsulfate kinase [Mucilaginibacter paludis DSM 18603]
 gi|311296513|gb|EFQ73658.1| adenylylsulfate kinase [Mucilaginibacter paludis DSM 18603]
          Length = 220

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 41/149 (27%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T  + L  +L   +Y                    +L       G   
Sbjct: 36  IWFTGLSGAGKSTIATELDSWLFDNHY-----------------YSYVLDGDNTRIGINK 78

Query: 67  EAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSSQHL-----F 116
           +     A R +    V  + +     G I +      S +A   Q  RD          F
Sbjct: 79  DLSFSRADRGENIRRVAEICKLFNDAGIICIA--SFISPFADDRQKARDIIGPDSFIETF 136

Query: 117 LDS------------LQEISVQEVMPDCT 133
           +D+            L +++   ++PD T
Sbjct: 137 IDTSIETCKQRDTKGLYQLAESGMLPDFT 165


>gi|310641677|ref|YP_003946435.1| group-specific protein [Paenibacillus polymyxa SC2]
 gi|309246627|gb|ADO56194.1| Group-specific protein [Paenibacillus polymyxa SC2]
          Length = 284

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          M S   +  EG+ G GKTT   L+   L   N  
Sbjct: 1  MRS-KLVLIEGLPGCGKTTTAQLVYEILTEMNIT 33


>gi|308231621|ref|ZP_07413180.2| adenylate kinase adk [Mycobacterium tuberculosis SUMu001]
 gi|308369975|ref|ZP_07419761.2| adenylate kinase adk [Mycobacterium tuberculosis SUMu002]
 gi|308370483|ref|ZP_07421708.2| adenylate kinase adk [Mycobacterium tuberculosis SUMu003]
 gi|308375236|ref|ZP_07443226.2| adenylate kinase adk [Mycobacterium tuberculosis SUMu007]
 gi|308376483|ref|ZP_07668284.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu008]
 gi|308377502|ref|ZP_07479417.2| adenylate kinase adk [Mycobacterium tuberculosis SUMu009]
 gi|308379851|ref|ZP_07487847.2| adenylate kinase adk [Mycobacterium tuberculosis SUMu011]
 gi|308396520|ref|ZP_07492351.2| adenylate kinase adk [Mycobacterium tuberculosis SUMu012]
 gi|308216733|gb|EFO76132.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu001]
 gi|308325724|gb|EFP14575.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu002]
 gi|308331878|gb|EFP20729.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu003]
 gi|308347034|gb|EFP35885.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu007]
 gi|308350918|gb|EFP39769.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu008]
 gi|308355608|gb|EFP44459.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu009]
 gi|308363471|gb|EFP52322.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu011]
 gi|308367107|gb|EFP55958.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu012]
          Length = 178

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 49/210 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSCGVDEFGAE 65
           G  GAGK T    L   L         T E       E  +        L  G       
Sbjct: 4   GPPGAGKGTQAVKLAEKL---GIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDL 60

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124
              +V         + +  P    G   + D +  S                 +L E + 
Sbjct: 61  TNELVD--------DRLNNPDAANGF--ILDGYPRS------------VEQAKALHEMLE 98

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLD--- 179
            +    D  +   +  ++ L+R++ R    ++    L+              +++ D   
Sbjct: 99  RRGTDIDAVLEFRVSEEVLLERLKGRGRADDTDDVILNRM------------KVYRDETA 146

Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +     D+   VD+  +   V    L  +
Sbjct: 147 PLLEYYRDQLKTVDAVGTMDEVFARALRAL 176


>gi|281348527|gb|EFB24111.1| hypothetical protein PANDA_018232 [Ailuropoda melanoleuca]
          Length = 160

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 26/143 (18%)

Query: 78  HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125
               +I   + +GKI+       L  R  D + A   Q  +          D+LQ     
Sbjct: 24  QYGELIEKYIKDGKIVPVEITISLLKREKDQTMAANAQMNKFLIDGFLRNKDNLQGWKKT 83

Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
            +   D    +  D   +I ++R   R      +  +    + +   EKR Q +L   + 
Sbjct: 84  MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKP 137

Query: 183 -----NQPDRCHIVDSAHSFQSV 200
                 +  +   +D++ S   V
Sbjct: 138 IIDLYEEMGKVKKIDASKSVDEV 160


>gi|256962337|ref|ZP_05566508.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256952833|gb|EEU69465.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
          Length = 164

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 32/156 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT    L + L+ +              + +  R  +L    +    
Sbjct: 4   KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVKDETGNI 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                          + ++     E + ++ +        +Q     S    +  L E +
Sbjct: 54  SIALF----------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 97

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           VQ          D+  +  LKR   R   +E   ++
Sbjct: 98  VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 127


>gi|294947356|ref|XP_002785347.1| ATP binding protein, putative [Perkinsus marinus ATCC 50983]
 gi|239899120|gb|EER17143.1| ATP binding protein, putative [Perkinsus marinus ATCC 50983]
          Length = 380

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 4/77 (5%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
          G  I   G  G+GK+T+   L+ +L+       +        + E     +L     +  
Sbjct: 11 GQLII--GPPGSGKSTYCRALRAYLRAAGRQCSIV--NLDPASEEPINPSILQEENGDDS 66

Query: 64 AEAEAIVFAAARLDHVE 80
           + E   F     + V 
Sbjct: 67 EDLETTYFDVDVRELVR 83


>gi|237756860|ref|ZP_04585340.1| cytidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237690985|gb|EEP60113.1| cytidylate kinase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 214

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 48/234 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFG 63
           + I+ +G  G+GK+T   LL + L    Y    T       A +  R ++ L    +   
Sbjct: 1   MIIAIDGPAGSGKSTIAKLLAKEL---GYTYIDTGAMYRAAALKLLRLNINLENEEEIMN 57

Query: 64  AEAEAIVFAAA-----RLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLF 116
                 +           + V ++IR   +     +  R+  +           S Q   
Sbjct: 58  VLENTQILLKDSQVFLDGEDVSDIIRTEEIGNVASIIARYPKVRKWMV------SKQREL 111

Query: 117 LDSLQEISVQE------VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDY------- 161
            +  + + ++       + P  D  I +    +I  +R + +    +   +DY       
Sbjct: 112 GEIAKNVVIEGRDAGSRIFPDADLKIFMTASAEIRAQR-RVQQLKEKGFVVDYNHILQKI 170

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDR----CHIVDSA-HSFQSVATNILNIVWE 210
            ER  +    K            P R      I+D+   S + V   I +++ +
Sbjct: 171 LERDKLDYERK----------ESPLRPTEDYIIIDTTDKSIEEVIDYIKSLINK 214


>gi|227542595|ref|ZP_03972644.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181793|gb|EEI62765.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 580

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 15/90 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G FI   G  GAGKTT++  L          V +T+ PG        R   +   ++ 
Sbjct: 280 HAGEFIVIIGPNGAGKTTYMRTLD--------GVLLTQNPG------LPRTCTVKKALEM 325

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
              +A+A + AA   D  +  + PAL  G+
Sbjct: 326 VTKDADAWISAAGLADLSDVPV-PALSGGQ 354


>gi|254458468|ref|ZP_05071893.1| signal recognition particle-docking protein FtsY [Campylobacterales
           bacterium GD 1]
 gi|207084776|gb|EDZ62063.1| signal recognition particle-docking protein FtsY [Campylobacterales
           bacterium GD 1]
          Length = 297

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            I   G+ GAGKTT IS L +  + +   V +    G T  A A   + L     + 
Sbjct: 88  LIV--GVNGAGKTTTISKLAQRYKNEGKKVIL--GAGDTFRAAAIEQLTLWSKKLDI 140


>gi|254374967|ref|ZP_04990447.1| hypothetical protein FTDG_01149 [Francisella novicida GA99-3548]
 gi|151572685|gb|EDN38339.1| hypothetical protein FTDG_01149 [Francisella novicida GA99-3548]
          Length = 343

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R         +   + E  
Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTQVVYQHE-- 202

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 203 --GADSASVIYDAISSAKSKGIDVVIAD 228


>gi|126698055|ref|YP_001086952.1| putative lantibiotic ABC transporter ATP-binding protein
          [Clostridium difficile 630]
 gi|255099600|ref|ZP_05328577.1| putative lantibiotic ABC transporter,ATP-binding protein
          [Clostridium difficile QCD-63q42]
 gi|115249492|emb|CAJ67307.1| ABC-type transport system,lantibiotic/multidrug-family
          ATP-binding protein [Clostridium difficile]
          Length = 234

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G  GAGK+T + +L   L+  N  +   R+P    +      ++ S  +       E ++
Sbjct: 38 GPNGAGKSTTLKMLVGLLRPTNGRIIFDRKPWKRESLAKIGSLIESPALYGNLTAEENLL 97


>gi|89885886|ref|YP_516084.1| type II secretion system protein E [Rhodoferax ferrireducens T118]
 gi|89347884|gb|ABD72086.1| type II secretion system protein E [Rhodoferax ferrireducens T118]
          Length = 575

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 12/118 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G FI   G  G GK+T +  L + L R   +V    +P     A   R + L+  + E
Sbjct: 310 KTGGFILISGATGMGKSTTLYALLQELDRDRLNVMTVEDPVEYQLA-FLRQIQLNQFLGE 368

Query: 62  FGAEAE---------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
              + E          +VF   R ++           G +++    + ++ A Q    
Sbjct: 369 QATDMERSLLRQDPDVLVFGEMRDENSTIAALRLAESGHLVIST--IHANDAVQTFER 424


>gi|34497559|ref|NP_901774.1| adenylyl-sulfate kinase [Chromobacterium violaceum ATCC 12472]
 gi|34103414|gb|AAQ59776.1| adenylyl-sulfate kinase [Chromobacterium violaceum ATCC 12472]
          Length = 219

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L+  L R  +                    +L       G       
Sbjct: 41  GLSGAGKSTIAYELEARLVRGGFSAV-----------------VLDGDNLRHGINRNLGF 83

Query: 71  FAAARLD---HVENVIRPALMEGKILLC 95
             A R +    V  V R     G I++C
Sbjct: 84  TDADRRENLRRVAEVARLMNDAGLIVIC 111


>gi|128395|sp|P25824|KAD_SCHMA RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|161048|gb|AAA29907.1| nucleoside monophosphate kinase [Schistosoma mansoni]
          Length = 197

 Score = 37.3 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 50/215 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    L +         H         + +  R  + S        + + + 
Sbjct: 16  GGPGSGKGTQCEKLVQKF-------HF----NHLSSGDLLRAEVQSG-----SPKGKELK 59

Query: 71  FAAARLDHVE-NVIRPALMEG------KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               R + V   V+   L E       KI++         + +  R+  Q +  +     
Sbjct: 60  AMMERGELVPLEVVLALLKEAMINWLTKIVIS-------LSIRYPRELDQGIKFE----- 107

Query: 124 SVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
             +EV P    I  D+  ++  KR+  R     +   +  +  +  I ++ R  F ++ +
Sbjct: 108 --KEVCPCLCVINFDVSEEVMRKRLLKR-----AETSNRVDDNEETIVKRFR-TFNELTK 159

Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                  Q ++   +D++ +  ++   + + + + 
Sbjct: 160 PVIEHYKQQNKVITIDASGTVDAIFDKVNHELQKF 194


>gi|294649111|ref|ZP_06726553.1| polyphosphate-AMP phosphotransferase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292824994|gb|EFF83755.1| polyphosphate-AMP phosphotransferase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 472

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 40/223 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
              + I+FEG++ AGK   I  + + L  + Y++H    P         R   L    + 
Sbjct: 277 KRNVIIAFEGMDAAGKGGAIKRIVKKLDPREYEIHTIAAPERYE----LRRPYLWRFWNR 332

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDS 119
                +  +F   R  +           G+ +L +R     S+ A+Q           D 
Sbjct: 333 LNDSGKITIF--DRTWY-----------GR-VLVERIEGFASTVAWQRAY--------DE 370

Query: 120 LQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIF 177
           +          DC T+I+ + + I       R+  RE      F+  +     + +   +
Sbjct: 371 INRFEQNLT--DCQTVIVKIWLAISKDEQARRFKEREQTLHKRFKITEEDWRNRDKWDQY 428

Query: 178 LDIARNQPDR-------CHIVDSAHSFQSVATNILNIVWELVQ 213
           L+ A +  +R        H++ +     +    +L  + + + 
Sbjct: 429 LEAAADMFERTDTANAPWHVI-ATDDKYTARIEVLKAILKQLN 470


>gi|291533283|emb|CBL06396.1| dethiobiotin synthase [Megamonas hypermegale ART12/1]
          Length = 222

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 4/99 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPAAEAARHVLLSCG 58
          M+ G+FI+  G +  GKT   +LL + L+  N++    +    G    AE+    +    
Sbjct: 1  MSKGIFITATGTD-IGKTYVTALLVKKLREANFNAGYYKAALSGADNIAESDAGFVNRIA 59

Query: 59 VDEFGAEAEA-IVFAAARLDHVENVIRPALMEGKILLCD 96
                +     ++  A   H+   I    +E   ++ D
Sbjct: 60 NIHQDEQTLLSYLYKNAVSPHLAAKIEGNPVEKDTVISD 98


>gi|194431739|ref|ZP_03064030.1| putative lipoprotein [Shigella dysenteriae 1012]
 gi|194420095|gb|EDX36173.1| putative lipoprotein [Shigella dysenteriae 1012]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPLGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|239828006|ref|YP_002950630.1| dephospho-CoA kinase [Geobacillus sp. WCH70]
 gi|239808299|gb|ACS25364.1| dephospho-CoA kinase [Geobacillus sp. WCH70]
          Length = 199

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 73/215 (33%), Gaps = 38/215 (17%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVH-----------VTREPGGTPAAEAARHVLLS 56
           G+ G   +GK+T   ++    +     V            V  E          + +L  
Sbjct: 6   GLTGGIASGKSTVTEMI----RGLGIPVIDADQVARDVVKVGEEAYEQIIKTFGQDILQE 61

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G  +       + +       +  ++ PA+         R L    AY  +   +  L 
Sbjct: 62  NGEIDRAKLGAIVFYNEQERKKLNAIVHPAVRR-------RMLAEKEAYVQKGAKTIVLD 114

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L E  +  ++ D  I++ +  DI L+R+  R    E   L    R  + +HEK ++ 
Sbjct: 115 IPLLFESELTHLI-DKIIVVYVDNDIQLERLMKRNGFSEEEALARI-RSQMPLHEKVKK- 171

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
               A        ++++  + +     +  I+ E 
Sbjct: 172 ----ADA------VINNNGTIEETKQQLFQILKEW 196


>gi|163731864|ref|ZP_02139311.1| guanylate kinase, putative [Roseobacter litoralis Och 149]
 gi|161395318|gb|EDQ19640.1| guanylate kinase, putative [Roseobacter litoralis Och 149]
          Length = 214

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          M  GL I      GAGK+T    L+ +
Sbjct: 4  MRRGLLIILSSPSGAGKSTLAQRLRDW 30


>gi|109824885|sp|Q48UU5|COAE_STRPM RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
          Length = 197

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 72/226 (31%), Gaps = 44/226 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH-----V 53
           + I   G   +GK+T + ++    ++  Y       V    +  G    EA R      +
Sbjct: 1   MIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFGNQI 56

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           L + G  +    +E +      +         +I+  L   +             +  + 
Sbjct: 57  LKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HLAQS 104

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         +    
Sbjct: 105 QAIFFMDIPILMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ---- 159

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   L I   +P    ++D++    ++   + + +  L   R
Sbjct: 160 --------LPIEEKKPYASLVIDNSGDIAALIKQVQSALLSLANPR 197


>gi|90419706|ref|ZP_01227615.1| ATP-binding protein, ABC-type sugar transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335747|gb|EAS49495.1| ATP-binding protein, ABC-type sugar transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 354

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 7/102 (6%)

Query: 4   GLFISFEGIEGAGKTTHISLLK--RFLQRK----NYDVHVTREPGGTPAAEAARHVLLSC 57
           G F+   G  G GK+T + +L     +          V     P     A   ++  L  
Sbjct: 29  GQFVVLVGPSGCGKSTLLRMLAGLEHITAGEILIGDRVVNALPPKDRDIAMVFQNYALYP 88

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRF 98
            +        +++   A    +   +RPA    G   L DR+
Sbjct: 89  HITVAENMGFSLMLKKASKAEIAERVRPAAEILGLTNLLDRY 130


>gi|73669273|ref|YP_305288.1| multidrug ABC transporter ATP-binding protein [Methanosarcina
           barkeri str. Fusaro]
 gi|72396435|gb|AAZ70708.1| multidrug ABC transporter, ATP-binding protein [Methanosarcina
           barkeri str. Fusaro]
          Length = 255

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 35/194 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGK+T + +L   L+          YD+    +   +  +   + + +     +  
Sbjct: 33  GPNGAGKSTTVMMLTTLLKPSSGTAKVCGYDIVKESKKVRSKISYVPQDMAVD---RKLT 89

Query: 64  AEAEAIVFAA-----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                +++A       R   V+ VI          L DR  D    Y G       L   
Sbjct: 90  GRENVLLYAKLYGIPNRESKVDEVIEMMG------LSDRAGDLVATYSGGMRRRLELAQA 143

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + E           + LD    +GL  V  R  + E   +   + + + I       +L
Sbjct: 144 LVHEPE--------VLFLD-EPTLGLD-VSGRKKIWEHIRM--LKAEGMTIFMTTH--YL 189

Query: 179 DIARNQPDRCHIVD 192
           + A    +R  I+D
Sbjct: 190 EEAEKYCNRVAIID 203


>gi|319791883|ref|YP_004153523.1| ABC transporter [Variovorax paradoxus EPS]
 gi|315594346|gb|ADU35412.1| ABC transporter related protein [Variovorax paradoxus EPS]
          Length = 346

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + L+ 
Sbjct: 26 IQKGEFIVFVGPSGCGKSTLLRLIA 50


>gi|295696834|ref|YP_003590072.1| ABC transporter related protein [Bacillus tusciae DSM 2912]
 gi|295412436|gb|ADG06928.1| ABC transporter related protein [Bacillus tusciae DSM 2912]
          Length = 256

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F+S  G  G GK+T +SLL   ++    +V +  EP   P+      +      +  
Sbjct: 32  AGEFVSIVGPSGCGKSTLLSLLAGMIRPTQGEVRLFGEPLTGPSRRVGYMLQHDSLFEWR 91

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
                 ++ A  R    E   R AL      L DR+    +A
Sbjct: 92  DVLHNVLIGAEVRGLDREAARRRALE-----LLDRYGLGGFA 128


>gi|294141582|ref|YP_003557560.1| general secretion pathway protein A [Shewanella violacea DSS12]
 gi|293328051|dbj|BAJ02782.1| general secretion pathway protein A, putative [Shewanella
          violacea DSS12]
          Length = 505

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46
          +G FI   G EG+GKTT ++ L   L   N DV V   P  +  
Sbjct: 42 TGGFILLTGDEGSGKTTLLTSLIAHLPE-NTDVAVMHNPAFSEV 84


>gi|284036588|ref|YP_003386518.1| deoxynucleoside kinase [Spirosoma linguale DSM 74]
 gi|283815881|gb|ADB37719.1| deoxynucleoside kinase [Spirosoma linguale DSM 74]
          Length = 220

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 29/175 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT    L  +     ++V      G    A+          +  +    
Sbjct: 3   IAITGNIGAGKTTLAEQLASYY---GWEVLYEAVEGNPYLAD------FYSDMPRWSFNL 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI-----------LLCDRFLDSSYAYQGERDSSQHL 115
           +     +  L  V+ +I   +                ++ DR +    A           
Sbjct: 54  QIYFLNSRFLQ-VKRIIDIQVANQHHTPQAGTASRRTVIQDRTIYEDAAIFARNLYVSGD 112

Query: 116 FLDSLQEISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
             +       Q           PD  I L   +    ++++ R  L E +  D +
Sbjct: 113 MSERDYNTYSQLFANMMSLVHPPDLMIYLRASLPKLREQIKKRGRLFEQSISDEY 167


>gi|302867127|ref|YP_003835764.1| hypothetical protein Micau_2652 [Micromonospora aurantiaca ATCC
          27029]
 gi|302569986|gb|ADL46188.1| hypothetical protein Micau_2652 [Micromonospora aurantiaca ATCC
          27029]
          Length = 191

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGG--TPAAEAARHV 53
          I  EGI G+GK+T  + L +      + V  +  EPG    P AE  R +
Sbjct: 7  ILVEGIHGSGKSTLAAHLAQRFGLPWHPVDDLLWEPGWVEVPVAEQRRRI 56


>gi|229593151|ref|YP_002875270.1| cell division protein [Pseudomonas fluorescens SBW25]
 gi|229365017|emb|CAY53174.1| cell division protein [Pseudomonas fluorescens SBW25]
          Length = 469

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 270 GVNGAGKTTTIGKLAKKLQSEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 325

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A      +L+ D
Sbjct: 326 TGADSASVIFDAVQAAKARNIDVLIAD 352


>gi|229818219|ref|ZP_04448501.1| hypothetical protein BIFANG_03517 [Bifidobacterium angulatum DSM
           20098]
 gi|229784470|gb|EEP20584.1| hypothetical protein BIFANG_03517 [Bifidobacterium angulatum DSM
           20098]
          Length = 188

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 33/205 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G +G GK T  +LL             T   G    A       L   V  +  + E + 
Sbjct: 7   GPQGVGKGTQAALLAEHY---GIPAIST---GDIFRANIKGKTELGLKVIAYTDKGELVP 60

Query: 71  FAAARLDHVENVIRPALMEGK----ILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEISV 125
                 +   ++++  L +       +L D +          R+++Q   LD+ L+E+  
Sbjct: 61  -----DELTNSIVKDRLAQDDTKNGWIL-DGY---------PRNAAQVEALDAMLEELGT 105

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEKRRQIFLDIARN 183
                D  + LD   D+ + R+  R     R     D    K +  + K     LD  ++
Sbjct: 106 PL---DAVVALDADHDVLMARIAKRAEEQGRTDDTPDAI-AKRLATYAKETAPLLDTYKS 161

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
           +      +D      ++  NI+  +
Sbjct: 162 RGQ-LVAIDGVGEIDAIQKNIVEAL 185


>gi|254504835|ref|ZP_05116986.1| signal recognition particle-docking protein FtsY, putative
           [Labrenzia alexandrii DFL-11]
 gi|222440906|gb|EEE47585.1| signal recognition particle-docking protein FtsY, putative
           [Labrenzia alexandrii DFL-11]
          Length = 465

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 16/139 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + L+ +   V +    G T  A A     L    +  GAE  A  
Sbjct: 269 GVNGTGKTTTIGKLSKKLREEGKTVMLAA--GDTFRAAAVEQ--LKIWGERTGAEVIARD 324

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128
             A       + ++ A  +   +L    +D+       R  ++   +D L+++   +++ 
Sbjct: 325 TGADAAGLAFDAMKEATEKQVDVLL---IDT-----AGRLQNKAELMDELEKVIRVIKKH 376

Query: 129 MPDC--TIILDLPVDIGLK 145
            PD   T +L L    G  
Sbjct: 377 DPDAPHTCLLTLDATTGQN 395


>gi|222096774|ref|YP_002530831.1| cobalt ABC transporter , ATP-binding protein [Bacillus cereus Q1]
 gi|221240832|gb|ACM13542.1| cobalt ABC transporter, ATP-binding protein [Bacillus cereus Q1]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|254167097|ref|ZP_04873950.1| cytidylate kinase, putative [Aciduliprofundum boonei T469]
 gi|197623953|gb|EDY36515.1| cytidylate kinase, putative [Aciduliprofundum boonei T469]
          Length = 179

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 66/206 (32%), Gaps = 43/206 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT   +L + L    Y +            +  R +     +D      
Sbjct: 3   ITISGPPGSGKTTVAKILSKKL---GYKLI--------SGGDIFRDMAKEHNMDLVEFSK 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            A        +    +I  A     I+L               DS    +L  L  I   
Sbjct: 52  YAENNWDVDREIDRRLIELAKENDNIIL---------------DSRLSGWLAHLNRI--- 93

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQI-FLDIA 181
              P   + ++  + + ++R+  R         +      E + +  ++K   I F D++
Sbjct: 94  ---PAFKVYVNASLPVRIERIWRREGGSFEKVKEETVYREESEKLR-YKKIYNIDFDDLS 149

Query: 182 RNQPDRCHIVDS-AHSFQSVATNILN 206
                   IVDS   + + +   I+ 
Sbjct: 150 IYD----LIVDSDNLTPEEITKIIME 171


>gi|156097939|ref|XP_001615002.1| adenylate kinase [Plasmodium vivax SaI-1]
 gi|148803876|gb|EDL45275.1| adenylate kinase, putative [Plasmodium vivax]
          Length = 259

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 8/65 (12%)

Query: 144 LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
           L R+  R    E+  L  F      ++E+ ++    I    P     VD   S +     
Sbjct: 196 LARLARRADDDEATFLKRFH-----LYEQSQE---KIVSLFPTVYRSVDGNGSIEETFAQ 247

Query: 204 ILNIV 208
           I  I+
Sbjct: 248 ICAII 252


>gi|126737850|ref|ZP_01753580.1| guanylate kinase [Roseobacter sp. SK209-2-6]
 gi|126721243|gb|EBA17947.1| guanylate kinase [Roseobacter sp. SK209-2-6]
          Length = 213

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 38/176 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I      GAGK+T    L+ +     + V   TR+P                   
Sbjct: 4   RRGLLIILSSPSGAGKSTLAKRLRSWDDSIRFSVSATTRQPRTGEV---------DGEDY 54

Query: 61  EFGAEAEAIVFAA--ARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGE 108
            F    +     A    L+H           +  +R A+  G+ +L D        +QG 
Sbjct: 55  HFTPVEDFKAAVASNDMLEHAHVFGNFYGSPKGPVRDAIEAGQDVLFD------IDWQGA 108

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           +             +S+  + P  T           +R+++R            E+
Sbjct: 109 QQIRNSELGQ--HTLSIFLLPPSIT--------ELRRRLESRGQDDAETISRRMEK 154


>gi|53802591|ref|YP_112672.1| cytochrome oxidase assembly family protein/cell division protein
           FtsY [Methylococcus capsulatus str. Bath]
 gi|53756352|gb|AAU90643.1| cytochrome oxidase assembly family protein/cell division protein
           FtsY [Methylococcus capsulatus str. Bath]
          Length = 671

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ + + V +    G T  A A   +      ++    A+   
Sbjct: 466 GVNGVGKTTTIGKLAKRLQNEGHSVMLAA--GDTFRAAAVEQLQTWGERNKIAVIAQHS- 522

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + +  A   G  IL+ D
Sbjct: 523 -GADSASVIYDAVEAARARGVDILIAD 548


>gi|20089752|ref|NP_615827.1| multidrug ABC transporter, ATP-binding protein [Methanosarcina
           acetivorans C2A]
 gi|19914689|gb|AAM04307.1| multidrug ABC transporter, ATP-binding protein [Methanosarcina
           acetivorans C2A]
          Length = 257

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 40/211 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGK+T + +L   L+          YD+    +      +   + + +     +  
Sbjct: 35  GPNGAGKSTTVMMLTTLLKPSSGTAKVCGYDIVRESKKVRAKISYVPQDMAVD---RKLT 91

Query: 64  AEAEAIVFAA-----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                +++A       R   V+ V+        + L DR  D    Y G       L   
Sbjct: 92  GRENVLLYAKLYGIPNRNSKVDEVLE------MMALSDRAGDLVKTYSGGMRRRLELAQA 145

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            + E           + LD    +GL  V  R  + E   +   + + + I       +L
Sbjct: 146 LVHEPE--------VLFLD-EPTLGLD-VSGRKKIWEHIRM--LKAEGMTIFMTTH--YL 191

Query: 179 DIARNQPDRCHIVD-----SAHSFQSVATNI 204
           + A    +R  I+D     +  S +++ ++I
Sbjct: 192 EEAEKYCNRVAIIDKGQIAAVGSPENLISSI 222


>gi|86151711|ref|ZP_01069925.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153575|ref|ZP_01071779.1| hypothetical protein CJJHB9313_0613 [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|157414886|ref|YP_001482142.1| hypothetical protein C8J_0566 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|167005255|ref|ZP_02271013.1| hypothetical protein Cjejjejuni_03180 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|315124122|ref|YP_004066126.1| hypothetical protein ICDCCJ07001_551 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841340|gb|EAQ58588.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85843301|gb|EAQ60512.1| hypothetical protein CJJHB9313_0613 [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|157385850|gb|ABV52165.1| hypothetical protein C8J_0566 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747523|gb|ADN90793.1| PvdS [Campylobacter jejuni subsp. jejuni M1]
 gi|315017844|gb|ADT65937.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315931804|gb|EFV10759.1| polyphosphate kinase 2 family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 293

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 52  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123


>gi|86147607|ref|ZP_01065917.1| adenylylsulfate kinase [Vibrio sp. MED222]
 gi|85834646|gb|EAQ52794.1| adenylylsulfate kinase [Vibrio sp. MED222]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +  Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGSGKSTVAGALENRLAQLGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|84387778|ref|ZP_00990793.1| adenylylsulfate kinase [Vibrio splendidus 12B01]
 gi|84377293|gb|EAP94161.1| adenylylsulfate kinase [Vibrio splendidus 12B01]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +  Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGSGKSTVAGALENRLAQLGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|226946816|ref|YP_002801889.1| signal recognition particle-docking protein FtsY [Azotobacter
           vinelandii DJ]
 gi|226721743|gb|ACO80914.1| signal recognition particle-docking protein FtsY [Azotobacter
           vinelandii DJ]
          Length = 451

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   LQ++   V +    G T  A A   + +    +     A+   
Sbjct: 252 GVNGVGKTTTIGKLAARLQQEGRKVMLAA--GDTFRAAAVEQLQIWGERNRIPVIAQH-- 307

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 308 TGADSASVIFDALQAAKARGMDVLIAD 334


>gi|317499560|ref|ZP_07957823.1| spermidine/putrescine transport system ATP-binding protein
          [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893109|gb|EFV15328.1| spermidine/putrescine transport system ATP-binding protein
          [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 118

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++F G  G GKTT + +L 
Sbjct: 31 INEGEFVTFLGPSGCGKTTILRMLA 55


>gi|315185284|gb|EFU19062.1| dethiobiotin synthase [Spirochaeta thermophila DSM 6578]
          Length = 227

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 4  GLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
          G  I   GI+ G GKT    LL R L  +   V   +      + + A  +L    +   
Sbjct: 2  GRIIGITGIDTGIGKTYVTGLLARVLNNRGIRVITAKAVQTGSSTQIAEDILQHRRLMGI 61

Query: 63 GAEAE 67
            + E
Sbjct: 62 PLQKE 66


>gi|300722249|ref|YP_003711533.1| shikimate kinase II [Xenorhabdus nematophila ATCC 19061]
 gi|297628750|emb|CBJ89328.1| shikimate kinase II [Xenorhabdus nematophila ATCC 19061]
          Length = 176

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          M   LFI   G  GAGKTT   LL   L  K  D
Sbjct: 1  MKQALFIV--GARGAGKTTIGKLLAEILSYKFID 32


>gi|288870811|ref|ZP_06115391.2| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288865810|gb|EFC98108.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 266

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQR 30
          MN    I  EGI G+GK+T +  L R    
Sbjct: 2  MNQPYNIFIEGIPGSGKSTLLDALARHFTN 31


>gi|258539168|ref|YP_003173667.1| excinuclease ABC subunit A [Lactobacillus rhamnosus Lc 705]
 gi|257150844|emb|CAR89816.1| Excinuclease ABC, subunit A [Lactobacillus rhamnosus Lc 705]
          Length = 964

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI   G+ G+GK+T ++ +L+R L +K         P            L++      
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQKLNHNSEKPGPYDKILGYKNIEKLINIDQSPI 691

Query: 63  G 63
           G
Sbjct: 692 G 692


>gi|258507919|ref|YP_003170670.1| excinuclease ABC subunit A [Lactobacillus rhamnosus GG]
 gi|257147846|emb|CAR86819.1| Excinuclease ABC, subunit A [Lactobacillus rhamnosus GG]
 gi|259649246|dbj|BAI41408.1| excinuclease ABC subunit A [Lactobacillus rhamnosus GG]
          Length = 964

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI   G+ G+GK+T ++ +L+R L +K         P            L++      
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQKLNHNSEKPGPYDKILGYKNIEKLINIDQSPI 691

Query: 63  G 63
           G
Sbjct: 692 G 692


>gi|229551771|ref|ZP_04440496.1| excision endonuclease subunit UvrA [Lactobacillus rhamnosus LMS2-1]
 gi|229314902|gb|EEN80875.1| excision endonuclease subunit UvrA [Lactobacillus rhamnosus LMS2-1]
          Length = 964

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI   G+ G+GK+T ++ +L+R L +K         P            L++      
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQKLNHNSEKPGPYDKILGYKNIEKLINIDQSPI 691

Query: 63  G 63
           G
Sbjct: 692 G 692


>gi|152977143|ref|YP_001376660.1| ABC transporter-related protein [Bacillus cereus subsp. cytotoxis
          NVH 391-98]
 gi|152025895|gb|ABS23665.1| ABC transporter-related protein [Bacillus cytotoxicus NVH 391-98]
          Length = 254

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
            G FIS  G  G GKTT +S++   L+  +  V +  EP
Sbjct: 31 KEGEFISILGPSGCGKTTLLSIIAGLLKPTDGLVFLEGEP 70


>gi|324119797|gb|EGC13677.1| yghS protein [Escherichia coli E1167]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 67/246 (27%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
               +        G     +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRYPQVEVPGFR 135

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 136 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 186

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 187 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 230

Query: 207 IVWELV 212
            +   +
Sbjct: 231 AIHAAL 236


>gi|311993295|ref|YP_004010160.1| Dda DNA helicase [Acinetobacter phage Acj9]
 gi|295917252|gb|ADG59923.1| Dda DNA helicase [Acinetobacter phage Acj9]
          Length = 440

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 20/138 (14%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           +  G  G GKTT   +L   L R      +   P        A+ VL      E      
Sbjct: 32  TINGPAGTGKTTLTRVLIDHLIRSGRTGIMLAAPTH-----QAKKVLAKLAGMEASTIHS 86

Query: 68  AIVFAAARLDHVENVIR---PALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114
            +       +     ++   P L E  +L+CD          R L +S  Y         
Sbjct: 87  LLKINPTTYEDTTEFVQSDTPDLSECSVLICDEVSMYDRELFRILLASVPYSCTIIGLG- 145

Query: 115 LFLDSLQEISVQEVMPDC 132
             +  ++ ++     P+ 
Sbjct: 146 -DMAQIRPVAPGNNRPEL 162


>gi|306843472|ref|ZP_07476073.1| ABC transporter, ATP-binding protein [Brucella sp. BO1]
 gi|306276163|gb|EFM57863.1| ABC transporter, ATP-binding protein [Brucella sp. BO1]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|296132775|ref|YP_003640022.1| ABC transporter related protein [Thermincola sp. JR]
 gi|296031353|gb|ADG82121.1| ABC transporter related protein [Thermincola potens JR]
          Length = 572

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEF- 62
           F+   G   AGK+T +  +   L+  +     + RE G TP AE AR+V  LS   +++ 
Sbjct: 338 FVVILGENAAGKSTLLKHVAGLLKPGRGSVSVMGRETGKTPLAELARYVGYLSQNPNDYL 397

Query: 63  --GAEAEAIVFA 72
                 E ++F 
Sbjct: 398 FQDTVEEELLFT 409


>gi|296810018|ref|XP_002845347.1| ABC multidrug transporter Mdr1 [Arthroderma otae CBS 113480]
 gi|238842735|gb|EEQ32397.1| ABC multidrug transporter Mdr1 [Arthroderma otae CBS 113480]
          Length = 1136

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 23/37 (62%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            +  G F++F G  G GK+T ++LL+RF   +   +HV
Sbjct: 1058 IKPGQFVAFVGPSGCGKSTVLALLERFFDPEIGRIHV 1094


>gi|199597264|ref|ZP_03210695.1| Excinuclease ATPase subunit [Lactobacillus rhamnosus HN001]
 gi|199591780|gb|EDY99855.1| Excinuclease ATPase subunit [Lactobacillus rhamnosus HN001]
          Length = 964

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI   G+ G+GK+T ++ +L+R L +K         P            L++      
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQKLNHNSEKPGPYDKILGYKNIEKLINIDQSPI 691

Query: 63  G 63
           G
Sbjct: 692 G 692


>gi|163790785|ref|ZP_02185211.1| ABC-type Mn/Zn transport system, ATPase component [Carnobacterium
           sp. AT7]
 gi|159873965|gb|EDP68043.1| ABC-type Mn/Zn transport system, ATPase component [Carnobacterium
           sp. AT7]
          Length = 256

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 4/91 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCG 58
            G   +  G  GAGK+T I  L   ++    +V    E          ++++     +  
Sbjct: 36  KGRLTAIVGPNGAGKSTLIKSLINLIKPVAGEVDFIFEQTKDENYGNNKNLVAYVPQNGS 95

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALME 89
           VD         V    R  H+    RP   +
Sbjct: 96  VDWDFPTTVLDVVVMGRYGHIGWFKRPKKKD 126


>gi|118593617|ref|ZP_01550994.1| hypothetical protein SIAM614_05486 [Stappia aggregata IAM 12614]
 gi|118433835|gb|EAV40495.1| hypothetical protein SIAM614_05486 [Stappia aggregata IAM 12614]
          Length = 515

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 62/205 (30%), Gaps = 36/205 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            ++  G+ G GKTT    +   + +     V  T         +  R  LL     E   
Sbjct: 343 LVAIGGLSGTGKTTLAYEIAPEIGRAPGARVLRT---------DVMRKRLLGIAETEQAP 393

Query: 65  EAEAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                  A+ ++ H ++  I+  L  G   + D               S+   ++S+   
Sbjct: 394 AEAYTREASQKVYHALDETIQTVLAAGHSAIID---------AVFAAESERERIESIAAK 444

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
                   C + L  P  +   RV  R      A     +          +  + D+ R 
Sbjct: 445 VECGF---CGLWLSAPEKVLKARVSAREDDASDATPAIID---------TQLGY-DLGRM 491

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
                  +D+ H+    A  +  ++
Sbjct: 492 ---TWAEIDAGHNVDETAAQVRRVL 513


>gi|32490969|ref|NP_871223.1| hypothetical protein WGLp220 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166175|dbj|BAC24366.1| mdl [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 582

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G FI   G  G+GK+T +SL+ R+    + ++     P  +      R+++
Sbjct: 361 GKFIGICGPTGSGKSTLVSLILRYFDIIDGEIFFKNLPLKSLILNDWRNLI 411


>gi|14590474|ref|NP_142542.1| hypothetical protein PH0578 [Pyrococcus horikoshii OT3]
 gi|3256984|dbj|BAA29667.1| 457aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 457

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   Y V V R P   P  +  + ++      E     E  +   
Sbjct: 143 GCGKSQTSRKVAQLLQEMGYKVAVIRHP--MPYGDLRKQIVQRFASFEDLDRYECTIEE- 199

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV---MP 130
                      P +  G ++       +   Y+     ++      L +    +     P
Sbjct: 200 ------REEYEPYIERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFYKP 247

Query: 131 DCTI 134
           D  I
Sbjct: 248 DLWI 251


>gi|329296972|ref|ZP_08254308.1| twitching motility protein [Plautia stali symbiont]
          Length = 224

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I   G  G+GK+T ++ L   L R+     +T E        + R ++    +    A 
Sbjct: 20 LILITGATGSGKSTTLAALVDSLNRQQVRHIITLEDPIEFVHHSQRSLIQQREIGAHCAS 79

Query: 66 AEAIVFAAARLD 77
           +  + AA R D
Sbjct: 80 FQLGLKAALRED 91


>gi|323705465|ref|ZP_08117040.1| signal recognition particle protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535367|gb|EGB25143.1| signal recognition particle protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 446

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 20/153 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++G+GKTT    L  +L+ K     +       PAA     V+   ++  V   G +  
Sbjct: 108 GLQGSGKTTTSGKLANYLRSKGKSPVLVACDIYRPAAIKQLQVVGSSINVPVFSMGDKTS 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            +  A A +D   N          +++ D            R       +D L+ I    
Sbjct: 168 PVDIAKASIDFARN------NNYNVVIID---------TAGRLHVDEELMDELKNI-KDA 211

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           V PD  I+L +    G   V    S  E   +D
Sbjct: 212 VNPD-EILLVVDAMTGQDVVNVAESFNEKLDID 243


>gi|315638479|ref|ZP_07893656.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter upsaliensis JV21]
 gi|315481470|gb|EFU72097.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter upsaliensis JV21]
          Length = 165

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M   L ++F G   +GKTT I  L R+  +K   V V +
Sbjct: 1  MKQ-LIMAFSGPSNSGKTTLIEKLARYFMQKGLKVLVIK 38


>gi|307108633|gb|EFN56873.1| hypothetical protein CHLNCDRAFT_21935 [Chlorella variabilis]
          Length = 629

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 13/129 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GK+T+++ +  +L +    V +      T  + A   +   C   +     
Sbjct: 425 IVFVGVNGVGKSTNLAKVAYWLLQNGVKVMIAA--CDTFRSGAVEQLKTHCARLQVPLYE 482

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +            + A   G  +L    +D+       R       + +L  + + 
Sbjct: 483 RG--YEKDPAKVAFEAAKAAQRSGIDVLL---VDT-----AGRMQDNEPLMRALSNL-IN 531

Query: 127 EVMPDCTII 135
              PD  + 
Sbjct: 532 LNQPDLVLF 540


>gi|229197419|ref|ZP_04324146.1| ABC transporter ATP-binding protein [Bacillus cereus m1293]
 gi|228586043|gb|EEK44134.1| ABC transporter ATP-binding protein [Bacillus cereus m1293]
          Length = 542

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 21 QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 70

Query: 62 FGAEAEAIVFAAARLDHVENVIRPALM 88
            A+   +VF       V + +   L 
Sbjct: 71 LSAQEIGMVFQNPENQLVMDTVIQELA 97


>gi|187934494|ref|YP_001884926.1| lipid A export ATP-binding/permease protein MsbA [Clostridium
           botulinum B str. Eklund 17B]
 gi|187722647|gb|ACD23868.1| lipid A export ATP-binding/permease protein MsbA [Clostridium
           botulinum B str. Eklund 17B]
          Length = 593

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           + SG  ++  G  GAGKTT I+LL RF + +   + +          E  R +
Sbjct: 374 IKSGQMVAIVGPTGAGKTTLINLLMRFYEIQGGSIKIDGVDSRDMKREDLRSI 426


>gi|148377862|ref|YP_001256738.1| ABC transporter, ATP-binding protein [Mycoplasma agalactiae PG2]
 gi|148291908|emb|CAL59299.1| ABC transporter, ATP binding protein [Mycoplasma agalactiae PG2]
          Length = 610

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRF 27
             G  I+  G  GAGKTT I+LL +F
Sbjct: 396 KPGKVIAIVGPTGAGKTTIINLLSKF 421


>gi|148654501|ref|YP_001274706.1| cytidylate kinase [Roseiflexus sp. RS-1]
 gi|148566611|gb|ABQ88756.1| cytidylate kinase [Roseiflexus sp. RS-1]
          Length = 244

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M++   I+ +G  GAGK+T   LL R L
Sbjct: 1  MSAPSIITIDGPAGAGKSTLGELLARRL 28


>gi|194466970|ref|ZP_03072957.1| Deoxyadenosine kinase [Lactobacillus reuteri 100-23]
 gi|194454006|gb|EDX42903.1| Deoxyadenosine kinase [Lactobacillus reuteri 100-23]
          Length = 213

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 68/220 (30%), Gaps = 28/220 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY-------DVHVTREPGGTPAAEAARHVLLSCGV 59
           I+  G  GAGKT+   LL   L  + +        +               +   L+  +
Sbjct: 2   IALAGTIGAGKTSLTKLLADHLNSQAFYESVDDNKILPLFYKDPKKYGFLLQIYFLNKRL 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLD 118
           DE        +    R    E+ +   L         R  ++ S  Y     +      +
Sbjct: 62  DEIKDSYSNDLNVLDRSI-FEDALLFKLNAD----MGRATETESSIYSSLLGNMMEELPE 116

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
              + +     P+  I + +  +  L+R++ R    E    D         ++   + ++
Sbjct: 117 QPHQKA-----PNLLITIRVSFETMLERIKKRGRSFEQIANDP---SLYSYYKNLNERYV 168

Query: 179 DIARNQPDRCH-IVDSAH-----SFQSVATNILNIVWELV 212
               +  +    ++D           + A  +L ++ E +
Sbjct: 169 QWYEDYNESPKMVIDGDKYDFVEDPAA-AKKVLAMIDEKL 207


>gi|91213824|ref|YP_543810.1| D-gluconate kinase [Escherichia coli UTI89]
 gi|117626612|ref|YP_859935.1| D-gluconate kinase [Escherichia coli APEC O1]
 gi|91075398|gb|ABE10279.1| thermosensitive gluconokinase [Escherichia coli UTI89]
 gi|115515736|gb|ABJ03811.1| thermosensitive gluconokinase [Escherichia coli APEC O1]
 gi|294493218|gb|ADE91974.1| thermosensitive gluconokinase [Escherichia coli IHE3034]
 gi|307629344|gb|ADN73648.1| D-gluconate kinase [Escherichia coli UM146]
          Length = 187

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  ++       +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQDDEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174


>gi|5305496|gb|AAD41679.1|AF086603_1 adenylate kinase [Ceratopteris richardii]
          Length = 165

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 48/168 (28%), Gaps = 39/168 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  + +                     A +  R  + S   +          
Sbjct: 29  GGPGSGKGTQCASIVEQFAF-----------THLSAGDLLRAEISSGSENGL-------- 69

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125
                      +I+  + EGKI+  +           ER  +    +D          + 
Sbjct: 70  -----------MIQNMIKEGKIVPSE-VTVKLLQNAMERSGNDKFLIDGFPRNEENRAAF 117

Query: 126 Q---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           +    + P+  +  D P +   +R+  R   R    ++  ++     H
Sbjct: 118 ELVTGITPEFILFFDCPEEEMERRLLGRNQGRVDDNIETIKKTFQSFH 165


>gi|326941002|gb|AEA16898.1| cobalt transport ATP-binding protein cbiO [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|321470325|gb|EFX81302.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 2 alpha [Daphnia
           pulex]
          Length = 582

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 30/150 (20%)

Query: 1   MNSGLF----ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           M  G F    + F G  G+GKTT    L+ +L  +                       L 
Sbjct: 1   MGQGRFRGCTVWFTGFSGSGKTTLSFALEDYLVMRGIPAFS-----------------LD 43

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
                FG  ++       R +++  V   A +         F +S         S     
Sbjct: 44  GDNMRFGLNSDLGFSDEDRQENIRRVAEVAKL---------FAESGVVTLCSFVSPFRED 94

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            D  ++I     +P   I +D P+++  +R
Sbjct: 95  RDRARKIHADAGLPFFEIFVDAPLNVCEER 124


>gi|330909044|gb|EGH37558.1| conserved ATP-binding protein YghS [Escherichia coli AA86]
          Length = 232

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/246 (12%), Positives = 64/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR--------KNYDVHVTREP------GGTPAAEAARH 52
           I+  G +G+GK+T  + L   L                   E        G P     R 
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 53  VLLSCGVDEFGA---EAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
                              +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 72  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 130

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFSR------ 181

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEIMQASLR 225

Query: 207 IVWELV 212
            +   +
Sbjct: 226 AIHAAL 231


>gi|291543686|emb|CBL16795.1| ABC-type multidrug transport system, ATPase component
          [Ruminococcus sp. 18P13]
          Length = 313

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          +G   +F G+ GAGK+T IS+L   L++ +  V V  +       + +R +
Sbjct: 38 AGALFAFLGVNGAGKSTTISILCGQLRKDSGTVIVCGKDTDADMGDISRML 88


>gi|283956016|ref|ZP_06373505.1| putative polyphosphate kinase [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792492|gb|EFC31272.1| putative polyphosphate kinase [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 293

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 52  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123


>gi|237756169|ref|ZP_04584738.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691676|gb|EEP60715.1| shikimate kinase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 166

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 56/198 (28%), Gaps = 44/198 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK+T   +L   L     D+    E          + +    G   F           
Sbjct: 11  GSGKSTVGKILAEKLNMNFIDIDKFIE---EKEGMKIKDIFEQKGESYF----------- 56

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
              +     I   + +  +++                      LD++  +       D  
Sbjct: 57  --RELERKQIEAIVNQEGLVVST-------------GGGLGANLDNMNLMKKNG---D-V 97

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
           + LD+ ++  L R++N             E+   +  E  R+    +A         +++
Sbjct: 98  VWLDVSLNTVLDRLKNDQDRPLLKQPT--EKIKQLFEE--RKNVYRLAN------IRINA 147

Query: 194 A-HSFQSVATNILNIVWE 210
              +   +   IL  +  
Sbjct: 148 DKKTPSQIVEEILTKIKR 165


>gi|256425834|ref|YP_003126487.1| deoxynucleoside kinase [Chitinophaga pinensis DSM 2588]
 gi|256040742|gb|ACU64286.1| deoxynucleoside kinase [Chitinophaga pinensis DSM 2588]
          Length = 211

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 32/197 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL R  +                  +   +  L+   ++    +
Sbjct: 10  IAIAGNIGAGKTTLTELLARHYK------------WAPQFEDVEHNPYLNDFYEDMPRWS 57

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
             +   F   RL  + ++ +      +I++ DR  + D+        +       D    
Sbjct: 58  FNLQIYFLHGRLRQLLDIEKG----NQIVIQDRTIYEDAHIFAPNLYEMGLMTKRDFDNY 113

Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSL-RESACLDYFERKDVMIH----E 171
            S  E +      PD  I L   V   + ++Q R     E+  LDY +R +   +    E
Sbjct: 114 FSFFETVKSMVKPPDLLIYLRASVPTLVAQIQKRGREYEENIRLDYLKRLN-EFYNNWIE 172

Query: 172 KRRQIFLDIARNQPDRC 188
           K  +  L I     ++ 
Sbjct: 173 KYAEGPLLIIDIDKNKF 189


>gi|239814118|ref|YP_002943028.1| ABC transporter [Variovorax paradoxus S110]
 gi|239800695|gb|ACS17762.1| ABC transporter related [Variovorax paradoxus S110]
          Length = 345

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + L+ 
Sbjct: 26 IQKGEFIVFVGPSGCGKSTLLRLIA 50


>gi|218898389|ref|YP_002446800.1| ABC transporter, ATP-binding protein [Bacillus cereus G9842]
 gi|218543860|gb|ACK96254.1| ABC transporter, ATP-binding protein [Bacillus cereus G9842]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|160894571|ref|ZP_02075347.1| hypothetical protein CLOL250_02123 [Clostridium sp. L2-50]
 gi|156863882|gb|EDO57313.1| hypothetical protein CLOL250_02123 [Clostridium sp. L2-50]
          Length = 927

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 10/88 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F+   G  G+GKTT +  LK  L  +       RE   T A +      LS   ++ 
Sbjct: 38  QGEFVVVAGGSGSGKTTLLRQLKPVLTPRGK-----REGAITFAGQE-----LSQMDEKM 87

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEG 90
             +    V        V + +   L  G
Sbjct: 88  QTQKIGFVMQDVDAQLVTDKVWHELAFG 115


>gi|16331632|ref|NP_442360.1| hypothetical protein slr0207 [Synechocystis sp. PCC 6803]
 gi|1001693|dbj|BAA10430.1| slr0207 [Synechocystis sp. PCC 6803]
          Length = 540

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 33/147 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    + + L   +              ++A R      G        +A +
Sbjct: 368 GLSGSGKSTVAKQIAQLLPAIHIR------------SDAVRK---HLGGVPLNKRGKANL 412

Query: 71  FAAARLDHVENVIRP----ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           ++ A  + V + ++     A+  G  ++ D   D     Q      +    + L      
Sbjct: 413 YSQAMTEKVYHSLQDLASLAVKSGFNVILDAKFDRE---QWRSPMVELALREQLS----- 464

Query: 127 EVMPDCTII-LDLPVDIGLKRVQNRYS 152
                 TII  D P+++  KR+Q+R  
Sbjct: 465 -----VTIIHCDAPIEVLTKRLQSRRG 486


>gi|13475505|ref|NP_107069.1| hypothetical protein mll6593 [Mesorhizobium loti MAFF303099]
 gi|14026257|dbj|BAB52855.1| mll6593 [Mesorhizobium loti MAFF303099]
          Length = 496

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 25/164 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLSCGVDEF 62
             ++  G+ G+GKTT    L   +            P G     ++  R  +     +  
Sbjct: 313 RLVAIGGLSGSGKTTIAEALAAHVGA----------PPGARIVESDRIRKAMHGVPAETR 362

Query: 63  GAEAEAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +       + R+ + +       L EG  ++ D                +    + ++
Sbjct: 363 LPDNAYRPDVSDRVYNEMTWRAGLILSEGGSVVAD------------AVFDRPADRERIE 410

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           + +    +P     L+    +  +RV  R      A +D   R+
Sbjct: 411 KAARDRGIPFFGFWLEADPLVLWQRVSERKGGPSDATVDILSRQ 454


>gi|86149839|ref|ZP_01068068.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|205355454|ref|ZP_03222225.1| hypothetical protein Cj8421_0606 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|218562255|ref|YP_002344034.1| putative polyphosphate kinase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|85839657|gb|EAQ56917.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|112359961|emb|CAL34750.1| putative polyphosphate kinase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|205346688|gb|EDZ33320.1| hypothetical protein Cj8421_0606 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 293

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 52  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123


>gi|296111821|ref|YP_003622203.1| deoxyguanosine kinase [Leuconostoc kimchii IMSNU 11154]
 gi|295833353|gb|ADG41234.1| deoxyguanosine kinase [Leuconostoc kimchii IMSNU 11154]
          Length = 210

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 68/225 (30%), Gaps = 52/225 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT   L+               EP G                     +    +   
Sbjct: 10  GVGKTTLTGLIAEHF---GTKAFY--EPVGDNPVLPL---------YYSDPKQYGFLLQI 55

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
             L+   ++I+ AL +   +L DR  + D+ +  +  +D                  +  
Sbjct: 56  YFLNRRFDMIKKALADDNNVL-DRSIYEDALFTSENHKDGNITDAEMSVYTQLLDNMMSE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++  +   PD  +  +   +  L R++ R    E      F+  D +     RQ +  
Sbjct: 115 LQKLPKKA--PDLLVYAETDFETILYRIKKRGRDYEQ-----FDDNDEL-----RQYYFR 162

Query: 180 IARNQPDRCHIVDSA-----------HSFQSVATNILNIVWELVQ 213
           I     D     D++              +     IL  + + ++
Sbjct: 163 IWSAYRDWFDAYDASPKLKIDLQTYDLEKEENQDIILQQIEDELK 207


>gi|294789648|ref|ZP_06754882.1| signal recognition particle-docking protein FtsY [Simonsiella
           muelleri ATCC 29453]
 gi|294482449|gb|EFG30142.1| signal recognition particle-docking protein FtsY [Simonsiella
           muelleri ATCC 29453]
          Length = 480

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L ++ Q +   V +
Sbjct: 286 GINGAGKTTSIGKLAKYFQAQGKSVML 312


>gi|323341637|ref|ZP_08081870.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464062|gb|EFY09255.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 233

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N G FI   G  GAGKTT ++++
Sbjct: 30 INKGEFIVIVGPSGAGKTTVMNII 53


>gi|258654868|ref|YP_003204024.1| ABC transporter [Nakamurella multipartita DSM 44233]
 gi|258558093|gb|ACV81035.1| ABC transporter related [Nakamurella multipartita DSM 44233]
          Length = 642

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 68/224 (30%), Gaps = 66/224 (29%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR-------FLQRKNYDVHVTREPG-GTPAA------ 47
            +G  ++  G  GAGKTT   L+ R        +     DV     P             
Sbjct: 409 RAGELVALVGPSGAGKTTISQLVPRIYDVDTGAVLVGGLDVREVTLPSLRGAIGVVAQDA 468

Query: 48  ----EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSS 102
               +  R  LL    +    E  A + AA   D VE      L EG   ++ DR     
Sbjct: 469 HLFHDTIRANLLYARPEATDDELVAALQAAQIWDLVER-----LPEGLGTVVGDR----- 518

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTII------LDLPVDIGLKRV-----QNRY 151
               G R S       ++  + ++   P   I+      LD   ++ ++R      + R 
Sbjct: 519 ----GHRLSGGEKQRLAIARVLLKA--PAIVILDEATAHLDSESEVAVQRALAAALRGRT 572

Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH 195
           SL  +  L                          DR  +VD+  
Sbjct: 573 SLVIAHRLSTI--------------------RSADRIVVVDAGR 596


>gi|206579049|ref|YP_002240192.1| putative amino acid ABC transporter, ATP-binding protein
          [Klebsiella pneumoniae 342]
 gi|288936936|ref|YP_003440995.1| ABC transporter [Klebsiella variicola At-22]
 gi|290510008|ref|ZP_06549378.1| amino acid ABC transporter, ATP-binding protein [Klebsiella sp.
          1_1_55]
 gi|206568107|gb|ACI09883.1| putative amino acid ABC transporter, ATP-binding protein
          [Klebsiella pneumoniae 342]
 gi|288891645|gb|ADC59963.1| ABC transporter related protein [Klebsiella variicola At-22]
 gi|289776724|gb|EFD84722.1| amino acid ABC transporter, ATP-binding protein [Klebsiella sp.
          1_1_55]
          Length = 272

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P    +  A R +
Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLSGGEILIDDKPTSRLSGSALRQL 98


>gi|206561562|ref|YP_002232327.1| adenylyl-sulfate kinase [Burkholderia cenocepacia J2315]
 gi|198037604|emb|CAR53542.1| adenylyl-sulfate kinase [Burkholderia cenocepacia J2315]
          Length = 187

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 21/94 (22%)

Query: 6  FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          F+    GI GAGK+T  +LLK  L  +                   R  LL       G 
Sbjct: 18 FVVWLTGISGAGKSTLANLLKEQLDARG-----------------LRTYLLDADRLREGL 60

Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            +     A R +++     V +  +    I++ 
Sbjct: 61 NRDLGFSDADRHENIRRTAEVAKLLVDAEFIVIA 94


>gi|156402905|ref|XP_001639830.1| predicted protein [Nematostella vectensis]
 gi|156226961|gb|EDO47767.1| predicted protein [Nematostella vectensis]
          Length = 597

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 43/138 (31%), Gaps = 26/138 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGKTT    L+ +L R+    +                  L       G     
Sbjct: 49  FTGLSGAGKTTLSMALEDYLCRQGIPAYT-----------------LDGDNMRTGLNRNL 91

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 R +++  V   A +         F DS         S      D  +++     
Sbjct: 92  GFTPEDREENIRRVSEVAKL---------FADSGMVCLTAFISPYSRDRDRARKLHEDAN 142

Query: 129 MPDCTIILDLPVDIGLKR 146
           +P   I ++ P++   KR
Sbjct: 143 LPFFEIFVNTPLETCEKR 160


>gi|9929284|emb|CAC05302.1| BphS protein [Cupriavidus necator]
          Length = 243

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 22/81 (27%), Gaps = 10/81 (12%)

Query: 144 LKRVQNRYSLRESACLDYFERKDVMIHEKRRQI--------FLDIARNQPDRCHIVDSAH 195
           L R Q R     +   D +E ++   H              F +I  +  +R   +    
Sbjct: 145 LARAQERVEANPAEAFDAWEARNQEFHNALMAASPSKWLANFREILFHNSERYRRLSGTQ 204

Query: 196 SF--QSVATNILNIVWELVQK 214
                 V      I    + +
Sbjct: 205 GPISVEVHEEHKTIFEAAIAR 225


>gi|298207773|ref|YP_003715952.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Croceibacter
           atlanticus HTCC2559]
 gi|83850411|gb|EAP88279.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Croceibacter
           atlanticus HTCC2559]
          Length = 204

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 42/194 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VF 71
           GAGKTT   LL +                     +   +  L    ++    +  +   F
Sbjct: 10  GAGKTTLTKLLAKH------------YNWEPEFEDVLDNPYLEDFYNKMARWSFNLQIYF 57

Query: 72  AAARLDHVENVIRPALMEGKILLCDR--FLDSS--------YAYQGERDSSQHLFLDSLQ 121
             +R       +      GK ++ DR  + D+               RD   +  L  L 
Sbjct: 58  LNSRF----RQVLDIRKHGKDVIQDRTIYEDAYIFAPNLHAMGLMTNRDFENYKSLFELM 113

Query: 122 EISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           E   +   PD  I L   +P  +G   +  R    E+          +    +  + +  
Sbjct: 114 ESVTKA--PDLLIYLRSSIPNLVGQ--IHKRGRDYENTI-------SIDYLSRLNERYEA 162

Query: 180 IARN-QPDRCHIVD 192
              +       ++D
Sbjct: 163 WIHDYDKGNLLVID 176


>gi|158313883|ref|YP_001506391.1| dephospho-CoA kinase [Frankia sp. EAN1pec]
 gi|158109288|gb|ABW11485.1| dephospho-CoA kinase [Frankia sp. EAN1pec]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 35/221 (15%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNY---DVHVTREPGGTPAAEAAR-HVLLSCGVDEFG 63
           GI G+GK+    LL      L   +    +V     PG    AEA    VLL+ G  +  
Sbjct: 6   GI-GSGKSAVSELLVEHGAHLVDADRIAREVVAPGTPGLAAVAEAFGPSVLLADGALDRE 64

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A    +    A    +E++  P +                A +        + +  +  +
Sbjct: 65  ALGRVVFADEASRRRLESITHPLIRA------------EMAARIASAPPDAVVIHDIPLL 112

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 P  D  ++++ P ++ L+R+  R   R+ A       +      +       +A
Sbjct: 113 VEGGPRPGYDAIVVVETPRELRLERLARRGLARDQAEA-RMAAQATDEQRR------AVA 165

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
                   +VD++ S   +   +  +  EL+++R + L+  
Sbjct: 166 D------ILVDNSGSLDDLRKRVGEVWGELLRRRDAGLAEP 200


>gi|332088355|gb|EGI93474.1| hypothetical protein SD15574_3333 [Shigella dysenteriae 155-74]
          Length = 232

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPLGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|315652480|ref|ZP_07905465.1| ABC superfamily ATP binding cassette transporter ABC protein
          [Eubacterium saburreum DSM 3986]
 gi|315485269|gb|EFU75666.1| ABC superfamily ATP binding cassette transporter ABC protein
          [Eubacterium saburreum DSM 3986]
          Length = 480

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          N G FI   G+ G GKT+ + LL
Sbjct: 28 NKGEFIVITGLSGCGKTSLLRLL 50


>gi|256544661|ref|ZP_05472033.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Anaerococcus vaginalis ATCC 51170]
 gi|256399550|gb|EEU13155.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Anaerococcus vaginalis ATCC 51170]
          Length = 221

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 25/37 (67%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +N G F++ +G  G+GK+T I L+ + L++ + ++ +
Sbjct: 26 LNKGDFLTIQGENGSGKSTLIKLILKDLKKNSGEIKL 62


>gi|254690188|ref|ZP_05153442.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus bv. 6 str.
           870]
 gi|256258442|ref|ZP_05463978.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus bv. 9 str.
           C68]
 gi|260755729|ref|ZP_05868077.1| ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260884755|ref|ZP_05896369.1| ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|297247284|ref|ZP_06931002.1| ABC transport system ATP-binding protein [Brucella abortus bv. 5
           str. B3196]
 gi|260675837|gb|EEX62658.1| ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260874283|gb|EEX81352.1| ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|297174453|gb|EFH33800.1| ABC transport system ATP-binding protein [Brucella abortus bv. 5
           str. B3196]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|226951854|ref|ZP_03822318.1| protein of hypothetical function DUF344 [Acinetobacter sp. ATCC
           27244]
 gi|226837394|gb|EEH69777.1| protein of hypothetical function DUF344 [Acinetobacter sp. ATCC
           27244]
          Length = 472

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 40/223 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
              + I+FEG++ AGK   I  + + L  + Y++H    P         R   L    + 
Sbjct: 277 KRNVIIAFEGMDAAGKGGAIKRIVKKLDPREYEIHTIAAPERYE----LRRPYLWRFWNR 332

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDS 119
                +  +F   R  +           G+ +L +R     S+ A+Q           D 
Sbjct: 333 LNDSGKITIF--DRTWY-----------GR-VLVERIEGFASTVAWQRAY--------DE 370

Query: 120 LQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIF 177
           +          DC T+I+ + + I       R+  RE      F+  +     + +   +
Sbjct: 371 INRFEQNLT--DCQTVIVKIWLAISKDEQARRFKEREQTLHKRFKITEEDWRNRDKWDQY 428

Query: 178 LDIARNQPDR-------CHIVDSAHSFQSVATNILNIVWELVQ 213
           L+ A +  +R        H++ +     +    +L  + + + 
Sbjct: 429 LEAAADMFERTDTANAPWHVI-ATDDKYTARIEVLKAILKQLN 470


>gi|167766700|ref|ZP_02438753.1| hypothetical protein CLOSS21_01206 [Clostridium sp. SS2/1]
 gi|317497529|ref|ZP_07955848.1| cytidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711637|gb|EDS22216.1| hypothetical protein CLOSS21_01206 [Clostridium sp. SS2/1]
 gi|291558358|emb|CBL37158.1| cytidylate kinase [butyrate-producing bacterium SSC/2]
 gi|316895212|gb|EFV17375.1| cytidylate kinase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 220

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 41/231 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    + + L+    D                R + L     E   + 
Sbjct: 4   IAIDGPAGAGKSTIAKTIAKKLEFIYVD-----------TGAMYRAMALYFIRHEIDPKD 52

Query: 67  EAIVFAAARLDHV----ENVIRPALMEGKIL---LCDR------FLDSSYAYQGERDSSQ 113
           E  +  A    HV    E+ ++  L+ G+ +   +  R          + AY+  R +  
Sbjct: 53  EEAINKACPDIHVSINYEDGVQQVLLNGENVNGLI--RTEEVGNMASKTSAYKMVRATLL 110

Query: 114 HLFLDSLQEISVQ--------EVMP--DCTIILDLPVDI-GLKRVQNRYSLRESACLDYF 162
            L  D  +  ++          V+P  D  I L     +   +R +        A  D  
Sbjct: 111 DLQRDLAKTANILMDGRDIGTNVLPNADLKIYLTASSKVRAERRYKELVEKGVEADFDKI 170

Query: 163 ERKDVMIHEKRRQIFLDIA-RNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
           E +D++I ++ + +  +IA   Q +   +VDS+  + + V   I+    ++
Sbjct: 171 E-EDIIIRDR-QDMEREIAPLKQAEDAVLVDSSDMTIEEVVDAIVAEFEKV 219


>gi|218904453|ref|YP_002452287.1| ABC transporter, ATP-binding protein [Bacillus cereus AH820]
 gi|218539098|gb|ACK91496.1| ABC transporter, ATP-binding protein [Bacillus cereus AH820]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|20094972|ref|NP_614819.1| ATPase [Methanopyrus kandleri AV19]
 gi|19888226|gb|AAM02749.1| P-loop ATPase of the PilT family [Methanopyrus kandleri AV19]
          Length = 644

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ ++  G  G+GK+T  + L  F   +   V     P      +       +    +  
Sbjct: 279 GILVA--GPPGSGKSTFCAALAEFYAEQGKIVKTMESPRDLQVGDEITQY--APLDGDME 334

Query: 64  AEAEAIVF 71
             A+ ++ 
Sbjct: 335 KTADILLL 342


>gi|17986296|ref|NP_538930.1| ABC transporter ATP-binding protein [Brucella melitensis bv. 1 str.
           16M]
 gi|225853487|ref|YP_002733720.1| ABC transporter-like protein [Brucella melitensis ATCC 23457]
 gi|256045658|ref|ZP_05448536.1| ABC transporter related protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112380|ref|ZP_05453301.1| ABC transporter related protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|256263033|ref|ZP_05465565.1| ATP/GTP-binding site domain-containing protein A [Brucella
           melitensis bv. 2 str. 63/9]
 gi|260562960|ref|ZP_05833446.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
           1 str. 16M]
 gi|265992080|ref|ZP_06104637.1| ABC transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993815|ref|ZP_06106372.1| ABC transporter [Brucella melitensis bv. 3 str. Ether]
 gi|17981879|gb|AAL51194.1| abc transporter ATP-binding protein [Brucella melitensis bv. 1 str.
           16M]
 gi|225641852|gb|ACO01766.1| ABC transporter related protein [Brucella melitensis ATCC 23457]
 gi|260152976|gb|EEW88068.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv.
           1 str. 16M]
 gi|262764796|gb|EEZ10717.1| ABC transporter [Brucella melitensis bv. 3 str. Ether]
 gi|263003146|gb|EEZ15439.1| ABC transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092906|gb|EEZ17081.1| ATP/GTP-binding site domain-containing protein A [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326410051|gb|ADZ67116.1| ABC transporter-like protein [Brucella melitensis M28]
 gi|326539768|gb|ADZ87983.1| ABC transporter related protein [Brucella melitensis M5-90]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|331701619|ref|YP_004398578.1| deoxyadenosine kinase [Lactobacillus buchneri NRRL B-30929]
 gi|329128962|gb|AEB73515.1| Deoxyadenosine kinase [Lactobacillus buchneri NRRL B-30929]
          Length = 217

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 49/155 (31%), Gaps = 27/155 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT    +   L                P  +     L      ++G   +      
Sbjct: 10  GVGKTTLTGKIAEHL---GTKAFF------EPVGDNPVLPLYYSNPKQYGFLLQIYFLNK 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QG-ERDSSQHLFLDSLQEIS-- 124
                   +I+ AL +   +L DR  + D+ +      QG   D+   ++L  L  +   
Sbjct: 61  RFS-----MIKQALSDDNNVL-DRSIYEDALFTRENNAQGNITDTELAVYLKLLNNMMAE 114

Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
              + +  PD  +  D   D    R++ R    E 
Sbjct: 115 LDELPKKAPDLLVYADSDFDTIKHRIKKRGRDYEQ 149


>gi|256832567|ref|YP_003161294.1| Shikimate kinase [Jonesia denitrificans DSM 20603]
 gi|256686098|gb|ACV08991.1| Shikimate kinase [Jonesia denitrificans DSM 20603]
          Length = 181

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 64/203 (31%), Gaps = 36/203 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK+T   LL   L+     V  T     + A ++   + +  G   F  E 
Sbjct: 11  VVLTGPPGAGKSTIARLLGEALE---LPVRDTDTDVESVAGKSITDIFVDDGEQHF-REL 66

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           EA   A A  +H                         A  G            ++     
Sbjct: 67  EAQAVATALREHTG---------------------VLALGGGAIMDPQTQELLMEYTVSG 105

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                  + LD+ +     R+    +          + K +M  + RR ++  +A     
Sbjct: 106 GT----VVFLDVSLAAAAPRIGFNQARPLLLGNPRAQWKKLM--DTRRPLYERVANA--- 156

Query: 187 RCHIVDSAHSFQSVATNILNIVW 209
             H+V    +   VA +I+++V 
Sbjct: 157 --HVVTDHRTPGEVAGDIVSLVK 177


>gi|325981848|ref|YP_004294250.1| dethiobiotin synthase [Nitrosomonas sp. AL212]
 gi|325531367|gb|ADZ26088.1| dethiobiotin synthase [Nitrosomonas sp. AL212]
          Length = 227

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 3/37 (8%)

Query: 1  MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVH 36
          M+ G F++  G + G GKTT    L      +   V 
Sbjct: 1  MSQGYFVT--GTDTGIGKTTVSCALLHAFAAQGKKVV 35


>gi|226315271|ref|YP_002775167.1| ABC transporter ATP binding protein [Brevibacillus brevis NBRC
          100599]
 gi|226098221|dbj|BAH46663.1| ABC transporter ATP binding protein [Brevibacillus brevis NBRC
          100599]
          Length = 353

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRK 31
           G  IS  G  G GKTT + L+  FL+ K
Sbjct: 28 KGQLISLLGPSGCGKTTTLRLIAGFLEAK 56


>gi|237654272|ref|YP_002890586.1| signal recognition particle-docking protein FtsY [Thauera sp. MZ1T]
 gi|237625519|gb|ACR02209.1| signal recognition particle-docking protein FtsY [Thauera sp. MZ1T]
          Length = 461

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 18/102 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60
           +    I   G+ G+GKTT I  L ++ Q     V +     G     AAR  L++ G   
Sbjct: 245 HRPFIIMIAGVNGSGKTTSIGKLAKYFQAHGKSVLLA---AGDTFRAAAREQLMTWGERN 301

Query: 61  ------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                 +   +A A++F A        +         ++L D
Sbjct: 302 NVTVVAQDSGDAAAVIFDAINAARARKI--------DVVLAD 335


>gi|150021431|ref|YP_001306785.1| signal recognition particle-docking protein FtsY [Thermosipho
           melanesiensis BI429]
 gi|149793952|gb|ABR31400.1| signal recognition particle-docking protein FtsY [Thermosipho
           melanesiensis BI429]
          Length = 295

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT    L  +  +    V +      T  A A     L    +   +   A  
Sbjct: 99  GVNGSGKTTTAGKLASYFSKNGKSVVLAA--CDTFRAAAIDQ--LKVWGERTNSTVIAHQ 154

Query: 71  FAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       + +  A+ + K I++ D            R  ++   ++ L++I+
Sbjct: 155 EGADSAAVAFDAVNHAISKNKDIVILD---------TAGRLHTKKNLMEELRKIN 200


>gi|71907412|ref|YP_284999.1| molybdopterin-guanine dinucleotide biosynthesis MobB region
          [Dechloromonas aromatica RCB]
 gi|71847033|gb|AAZ46529.1| molybdopterin guanine dinucleotide biosynthesis accessory protein
          MobB [Dechloromonas aromatica RCB]
          Length = 168

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 18/68 (26%), Gaps = 3/68 (4%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
          G+GKTT +  L   L  +   V V +                           E ++   
Sbjct: 11 GSGKTTLLEKLIPQLTARGLKVSVIK---HAHHGFDIDRPGKDSYRHREAGATEVLLSCG 67

Query: 74 ARLDHVEN 81
           R   +  
Sbjct: 68 DRWALMHE 75


>gi|81428757|ref|YP_395757.1| putative multidrug ABC exporter, ATP-binding and
           membrane-spanning/permease subunits [Lactobacillus sakei
           subsp. sakei 23K]
 gi|78610399|emb|CAI55449.1| Putative multidrug ABC exporter, ATP-binding and
           membrane-spanning/permease subunits [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 625

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
             G  I+  G  GAGKTT I+LL+RF       + +        + E  R 
Sbjct: 407 KPGQMIAIVGPTGAGKTTIINLLERFYDVSGGSIKLKGVDTRDMSREELRS 457


>gi|14521320|ref|NP_126795.1| adenylate kinase [Pyrococcus abyssi GE5]
 gi|9910754|sp|Q9UZN1|KAD_PYRAB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|5458538|emb|CAB50026.1| adkE adenylate kinase (adk) (EC 2.7.4.3) [Pyrococcus abyssi GE5]
          Length = 220

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 64/226 (28%), Gaps = 50/226 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK+T    +                     + +  R  +        G E E  +
Sbjct: 7   GPPGSGKSTQARRITER-----------YGLTYIASGDIIRAEIK--ARTPLGIEMERYL 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
              +R D + + I        +++   R +  ++   G   +     +     +    + 
Sbjct: 54  ---SRGDLIPDTIV-----NTLIISKLRRVRENFIMDGYPRT-PEQVITLENYLYDHGIK 104

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFERKDV--M 168
            D  I + +  +  ++R+  R    +   +                   +  +R D    
Sbjct: 105 LDVAIDIYITKEESVRRISGRRICSKCGAVYHVEFNPPKVPGKCDICGGELIQRPDDRPE 164

Query: 169 IHEKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208
           I EKR  I+            +      +D   S   V   I  ++
Sbjct: 165 IVEKRYDIYSKNMEPIIKFYQKQGIYVRIDGHGSIDEVWERIRPLL 210


>gi|116490462|ref|YP_810006.1| excinuclease ABC subunit A [Oenococcus oeni PSU-1]
 gi|116091187|gb|ABJ56341.1| Excinuclease ABC subunit A [Oenococcus oeni PSU-1]
          Length = 952

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI+  G+ G+GK+T ++ +LKR L++K
Sbjct: 633 GKFIAVTGVSGSGKSTLVNSILKRALKQK 661


>gi|323495542|ref|ZP_08100616.1| adenylylsulfate kinase [Vibrio sinaloensis DSM 21326]
 gi|323319423|gb|EGA72360.1| adenylylsulfate kinase [Vibrio sinaloensis DSM 21326]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L ++ Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENKLAQQGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELSKLMADAGLIVLS 109


>gi|317159234|ref|XP_001827641.2| lipid A export ATP-binding/permease protein msbA [Aspergillus oryzae
            RIB40]
          Length = 1310

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/25 (64%), Positives = 19/25 (76%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRF 27
            SG F++F G  G GKTT ISLL+RF
Sbjct: 1085 SGQFVAFVGPSGCGKTTVISLLERF 1109


>gi|311899873|dbj|BAJ32281.1| putative multidrug ABC transporter ATP-binding protein
           [Kitasatospora setae KM-6054]
          Length = 318

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 65/207 (31%), Gaps = 30/207 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFGAEA 66
           G  GAGKTT + +L   L        V          E  R +          D+  A  
Sbjct: 38  GPNGAGKTTTLRMLATLLVPDGGAATVAGADLRAEPGEVRRRIGYVAQGGGTTDQATARE 97

Query: 67  EAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           E ++    +   + + V+   +           DR +  +  Y G +     L L  +  
Sbjct: 98  ELVLQARMYGVRKAEAVQRAEQGLAAFDLTEFGDR-VCKT--YSGGQRRRLDLALGVVH- 153

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
                  P   + LD    +GL     R   +  + +     + + +       +LD A 
Sbjct: 154 ------RP-KVLFLD-EPTVGLD---PRSRSQVWSEVRRLREQGMTVLLTTH--YLDEAD 200

Query: 183 NQPDRCHIVD-----SAHSFQSVATNI 204
              DR  IVD     +  + + +   I
Sbjct: 201 ALCDRIGIVDNGGIVTEGTPEELKQKI 227


>gi|306842829|ref|ZP_07475469.1| ABC transporter, ATP-binding protein [Brucella sp. BO2]
 gi|306287023|gb|EFM58534.1| ABC transporter, ATP-binding protein [Brucella sp. BO2]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|296272852|ref|YP_003655483.1| ABC transporter-like protein [Arcobacter nitrofigilis DSM 7299]
 gi|296097026|gb|ADG92976.1| ABC transporter related protein [Arcobacter nitrofigilis DSM
          7299]
          Length = 295

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL 54
          G F S  G  G GKTT + ++  FL+      +   +E  G P  +   +++
Sbjct: 30 GKFFSILGPSGCGKTTLLRMIAGFLEPSSGNIIINNKEMVGVPPNKRPVNLV 81


>gi|294506489|ref|YP_003570547.1| Sulfate adenylyltransferase subunit 1 [Salinibacter ruber M8]
 gi|294342817|emb|CBH23595.1| Sulfate adenylyltransferase subunit 1 [Salinibacter ruber M8]
          Length = 674

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 43/203 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    ++  L   +                    ++L       G   +   
Sbjct: 506 GLSGAGKSTIAKAVEERLFDADVQT-----------------MMLDGDNVRHGLSGDLGF 548

Query: 71  FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A R +    V  V R    +G + LC     S   YQ +RD ++ L  D +++  ++ 
Sbjct: 549 TPADRTENIRRVSEVARLFFEQGNVTLC--SFVSP--YQEDRDRARELLPDDVRDRFLEV 604

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            +       D P+ +  +R             +  E  ++         +   A   PD 
Sbjct: 605 HV-------DCPLQVCKER-------DTKGLYEKAEAGEITNFTGVSAPYE--APEDPD- 647

Query: 188 CHIVDSAH-SFQSVATNILNIVW 209
             +V++     ++ A  I+  + 
Sbjct: 648 -VVVNTDEMGVEACADQIVEALE 669


>gi|284165224|ref|YP_003403503.1| cytidylate kinase [Haloterrigena turkmenica DSM 5511]
 gi|284014879|gb|ADB60830.1| cytidylate kinase [Haloterrigena turkmenica DSM 5511]
          Length = 203

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 41/150 (27%), Gaps = 30/150 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           LFI+  G  G G TT    L                       E  R +     +     
Sbjct: 15  LFITVSGPPGCGATTLCERLAD---AMGCPYV--------SGGEVFREIAEDRDMSLNQL 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A+     A   D ++  I   L +              A +    +   +    L    
Sbjct: 64  TAK-----ADENDEIDRAIDQRLQQ-------------IAEKWGMANKPFILESRLAGW- 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
           +     D  I LD P D+ L R++ R    
Sbjct: 105 LAGERADLRIWLDAPEDVRLARIEERVETE 134


>gi|295675683|ref|YP_003604207.1| adenylylsulfate kinase [Burkholderia sp. CCGE1002]
 gi|295435526|gb|ADG14696.1| adenylylsulfate kinase [Burkholderia sp. CCGE1002]
          Length = 212

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 14/85 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L+  L    +  +V          +  RH L S    E     E   
Sbjct: 35  GLSGAGKSTLAFALEERLIALGHACYVL-------DGDNVRHGLASDLGFERDDRRE--- 84

Query: 71  FAAARLDHVENVIRPALMEGKILLC 95
               R+ HV  ++  A   G I++ 
Sbjct: 85  -NIRRVAHVAQLMNDA---GLIVIT 105


>gi|239931901|ref|ZP_04688854.1| dephospho-CoA kinase [Streptomyces ghanaensis ATCC 14672]
 gi|291440271|ref|ZP_06579661.1| dephospho-CoA kinase [Streptomyces ghanaensis ATCC 14672]
 gi|291343166|gb|EFE70122.1| dephospho-CoA kinase [Streptomyces ghanaensis ATCC 14672]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 42/215 (19%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFG 63
           GI GAGK+    LL      L   +       EPG TP   A        +L+       
Sbjct: 9   GI-GAGKSEVSRLLVECGAVLIDADRIAREVVEPG-TPGLAAIVDAFGTDVLAPDGSLDR 66

Query: 64  AEAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               ++VFA   RL  + +++ P +                A   E +++       + +
Sbjct: 67  PALGSLVFADPDRLAVLNSIVHPLVG---------------ARSRELEAAVAEDAVVVHD 111

Query: 123 ISV---QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           + +     + P  D  I++D   +  L R+  R  + E               +  R+  
Sbjct: 112 VPLLTENGLAPLYDLVIVVDASPETQLDRLVRRRGMTEEDARARMAA------QATREQR 165

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
            +IA        ++D+    +++   +  +  +LV
Sbjct: 166 REIAD------IVIDNDVPLEALERRVKEVWADLV 194


>gi|229541498|ref|ZP_04430558.1| excinuclease ABC, A subunit [Bacillus coagulans 36D1]
 gi|229325918|gb|EEN91593.1| excinuclease ABC, A subunit [Bacillus coagulans 36D1]
          Length = 954

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           GLFI+  G+ G+GK+T +       L + LQR        +E  G    +    +
Sbjct: 632 GLFIAVTGVSGSGKSTLVNEILHKALAQKLQRAKAKPGAYKEIKGIEHLDKVIDI 686


>gi|227530091|ref|ZP_03960140.1| guanylate kinase [Lactobacillus vaginalis ATCC 49540]
 gi|227350012|gb|EEJ40303.1| guanylate kinase [Lactobacillus vaginalis ATCC 49540]
          Length = 189

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 16/39 (41%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          MN G      G  G+GKTT    L    + +    H TR
Sbjct: 1  MNFGKVFVIAGAAGSGKTTVAKYLHDRYKMERVITHTTR 39


>gi|261404891|ref|YP_003241132.1| hypothetical protein GYMC10_1028 [Paenibacillus sp. Y412MC10]
 gi|261281354|gb|ACX63325.1| conserved hypothetical protein [Paenibacillus sp. Y412MC10]
          Length = 283

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48
          M +   I  EG+ G GK+T   +L   L   N +  +  E      A+
Sbjct: 1  MKT-KLIMVEGLPGFGKSTTSRMLHDILSEHNIESRLVMEGDNDHPAD 47


>gi|157803379|ref|YP_001491928.1| coproporphyrinogen III oxidase [Rickettsia canadensis str. McKiel]
 gi|157784642|gb|ABV73143.1| coproporphyrinogen III oxidase [Rickettsia canadensis str. McKiel]
          Length = 449

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT    L   L+  N  V +       PAA+    +L
Sbjct: 109 GLQGSGKTTASGKLALRLKNHNKKVLLVSLDTYRPAAQEQLAIL 152


>gi|145224761|ref|YP_001135439.1| signal recognition particle protein [Mycobacterium gilvum PYR-GCK]
 gi|315445091|ref|YP_004077970.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. Spyr1]
 gi|145217247|gb|ABP46651.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium gilvum PYR-GCK]
 gi|315263394|gb|ADU00136.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. Spyr1]
          Length = 535

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTT    L ++L+ + + 
Sbjct: 107 GLQGSGKTTLAGKLAKWLKAQGHT 130


>gi|117921709|ref|YP_870901.1| cell division protein ZipA [Shewanella sp. ANA-3]
 gi|117614041|gb|ABK49495.1| cell division protein ZipA [Shewanella sp. ANA-3]
          Length = 184

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 51/170 (30%), Gaps = 31/170 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N G  +   G  GAGK+T    L      K     +  E              LS     
Sbjct: 21  NKGTLVLLCGKMGAGKSTLARELA-----KGERCVLISEDEW-----------LSTLYPN 64

Query: 62  FGAEAEAIVFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              + +A +  AARL   ++  I   L  G  ++ D              ++       L
Sbjct: 65  EIKDFDAYIHYAARLKPLLKRHIEALLQAGLTVVMD------------FPANTLNQRRWL 112

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
             +S+        I L    ++ L R+  R           F+ + V  H
Sbjct: 113 LGLSLDTGAAHRLIYLKHSDELCLSRLALRRQAEPERAQ--FDTEAVYWH 160


>gi|226943735|ref|YP_002798808.1| adenylylsulfate kinase [Azotobacter vinelandii DJ]
 gi|226718662|gb|ACO77833.1| Adenylylsulfate kinase [Azotobacter vinelandii DJ]
          Length = 197

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  + L+  L  +    +                 LL       G   +   
Sbjct: 32  GLSGAGKSTIANALELALVERGRHTY-----------------LLDGDNVRMGLCRDLGF 74

Query: 71  FAAARLDHVENVIRPAL---MEGKILLC 95
             A R +++  V   A      G I++ 
Sbjct: 75  SDADREENIRRVAEVAHLFVDAGLIVIS 102


>gi|306821120|ref|ZP_07454736.1| cytidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
          43715]
 gi|304550813|gb|EFM38788.1| cytidylate kinase [Eubacterium yurii subsp. margaretiae ATCC
          43715]
          Length = 213

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+F+G  G+GK+T   ++   L
Sbjct: 1  MIIAFDGPAGSGKSTVAKIISEKL 24


>gi|301648250|ref|ZP_07247994.1| putrescine/spermidine ABC transporter ATPase protein [Escherichia
          coli MS 146-1]
 gi|301073666|gb|EFK88472.1| putrescine/spermidine ABC transporter ATPase protein [Escherichia
          coli MS 146-1]
          Length = 382

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          G FI+  G  G GKTT ++L+  F +    ++ +  E
Sbjct: 51 GEFITLLGPSGCGKTTLLNLMAGFAEADGGEIFIDGE 87


>gi|298242036|ref|ZP_06965843.1| ABC transporter related protein [Ktedonobacter racemifer DSM
          44963]
 gi|297555090|gb|EFH88954.1| ABC transporter related protein [Ktedonobacter racemifer DSM
          44963]
          Length = 460

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +SG  I+  G  GAGKTT + LL   L+ +  DV +
Sbjct: 36 SSGEMIALLGPNGAGKTTLLRLLSGVLRPQRGDVLL 71


>gi|284925865|gb|ADC28217.1| putative polyphosphate kinase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 295

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            GL   I  EG + AGK   I  L   L  +   V    +P      +            
Sbjct: 54  KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 102

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                            + +  I      G+I++ DR   
Sbjct: 103 -----------------YFQRYIAHLPSAGEIVIFDRSWY 125


>gi|260582148|ref|ZP_05849942.1| predicted protein [Haemophilus influenzae NT127]
 gi|260094780|gb|EEW78674.1| predicted protein [Haemophilus influenzae NT127]
          Length = 59

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 30 GMIITVDGPSGAGKGTLCYALAEKL 54


>gi|260462154|ref|ZP_05810398.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259032014|gb|EEW33281.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 183

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 28/109 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-----CGV 59
            F    G  G+GKTT I  L++               G   + EA R ++          
Sbjct: 7   RFFVLTGGPGSGKTTLIEALRQA--------------GYATSIEAGRGIIRDQSAIGGSA 52

Query: 60  DEFGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
             +      AE ++    R        R A+ +   +  DR +  +  Y
Sbjct: 53  LPWHDRALFAELMLSWEMRSY------RHAIEQKGPVFFDRGVPDTLGY 95


>gi|298346405|ref|YP_003719092.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC
          43063]
 gi|298236466|gb|ADI67598.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Mobiluncus curtisii ATCC 43063]
          Length = 509

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G FI   G  G+GKTT    L
Sbjct: 31 IKKGEFIVISGPSGSGKTTFARCL 54


>gi|212634886|ref|YP_002311411.1| DamX domain-containing protein [Shewanella piezotolerans WP3]
 gi|212556370|gb|ACJ28824.1| DamX domain protein [Shewanella piezotolerans WP3]
          Length = 474

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDE 61
           I   G EGAGKTT ++ L   L+  +  + +   P    +AE  R +L+        D+
Sbjct: 29 LIVLTGEEGAGKTTLVTALLTELEEFSSALVIC--PKYCDSAEIRRKILVQLLADPVFDD 86

Query: 62 FGAEAEAIV 70
               E ++
Sbjct: 87 ELPLPETML 95


>gi|260815098|ref|XP_002602311.1| hypothetical protein BRAFLDRAFT_127318 [Branchiostoma floridae]
 gi|229287619|gb|EEN58323.1| hypothetical protein BRAFLDRAFT_127318 [Branchiostoma floridae]
          Length = 1887

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 17/98 (17%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFG--AEA 66
            G  GAGKTT ++++   +            P       A   +L  LS      G   + 
Sbjct: 1187 GPNGAGKTTAMNVITADMA-----------PSEGRVCVAGHDILSSLSEAFQAMGYCPQT 1235

Query: 67   EAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSS 102
            +A+       +H+E    +R    +   ++CD F++S 
Sbjct: 1236 DALWELVTLREHLEIYAAMRGMKDKDIKVICDHFIESM 1273


>gi|195384269|ref|XP_002050840.1| brown [Drosophila virilis]
 gi|194145637|gb|EDW62033.1| brown [Drosophila virilis]
          Length = 669

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          + +G  I+  G  GAGKTT ++ + + L+
Sbjct: 53 LKTGDLIAILGGSGAGKTTLLAAISQRLR 81


>gi|196037747|ref|ZP_03105057.1| ABC transporter, ATP-binding protein [Bacillus cereus NVH0597-99]
 gi|196031017|gb|EDX69614.1| ABC transporter, ATP-binding protein [Bacillus cereus NVH0597-99]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|145627791|ref|ZP_01783592.1| cytidylate kinase [Haemophilus influenzae 22.1-21]
 gi|145633050|ref|ZP_01788782.1| cytidylate kinase [Haemophilus influenzae 3655]
 gi|145635068|ref|ZP_01790774.1| cytidylate kinase [Haemophilus influenzae PittAA]
 gi|145639260|ref|ZP_01794866.1| cytidylate kinase [Haemophilus influenzae PittII]
 gi|145641172|ref|ZP_01796752.1| cytidylate kinase [Haemophilus influenzae R3021]
 gi|148826173|ref|YP_001290926.1| cytidylate kinase [Haemophilus influenzae PittEE]
 gi|148828366|ref|YP_001293119.1| cytidylate kinase [Haemophilus influenzae PittGG]
 gi|229846249|ref|ZP_04466361.1| cytidylate kinase [Haemophilus influenzae 7P49H1]
 gi|144979566|gb|EDJ89225.1| cytidylate kinase [Haemophilus influenzae 22.1-21]
 gi|144986276|gb|EDJ92855.1| cytidylate kinase [Haemophilus influenzae 3655]
 gi|145267676|gb|EDK07674.1| cytidylate kinase [Haemophilus influenzae PittAA]
 gi|145271563|gb|EDK11474.1| cytidylate kinase [Haemophilus influenzae PittII]
 gi|145274009|gb|EDK13875.1| cytidylate kinase [Haemophilus influenzae 22.4-21]
 gi|148716333|gb|ABQ98543.1| cytidylate kinase [Haemophilus influenzae PittEE]
 gi|148719608|gb|ABR00736.1| cytidylate kinase [Haemophilus influenzae PittGG]
 gi|229811253|gb|EEP46970.1| cytidylate kinase [Haemophilus influenzae 7P49H1]
 gi|301170404|emb|CBW30010.1| unnamed protein product [Haemophilus influenzae 10810]
          Length = 31

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 2  GMIITVDGPSGAGKGTLCYALAEKL 26


>gi|126695524|ref|YP_001090410.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9301]
 gi|126542567|gb|ABO16809.1| Adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9301]
          Length = 207

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + G+ I F G+ G+GK+T  + L   L    +  +V
Sbjct: 30 HKGMVIWFTGLSGSGKSTLANALNEVLHLDGFSTYV 65


>gi|145528502|ref|XP_001450045.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417645|emb|CAK82648.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1141

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             ++  G  GAGKTT I L+   L+        TR                         
Sbjct: 875 KILTLLGPNGAGKTTLIQLITDCLK--------TRWGSIMYNENMIISSCQQSEGLWEDL 926

Query: 65  EAEAIVFAAARLD----HVENVIRPALM----EGKIL 93
            AE I++  AR+     +V+N I   L     +GKI+
Sbjct: 927 TAEEILYLFARIKGGIRNVKNEISQILRILQIKGKIV 963


>gi|118362049|ref|XP_001014252.1| UMP-CMP kinase family protein [Tetrahymena thermophila]
 gi|89296019|gb|EAR94007.1| UMP-CMP kinase family protein [Tetrahymena thermophila SB210]
          Length = 194

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 61/208 (29%), Gaps = 45/208 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEFG 63
           G  G+GK T    L        L   +    + RE    G+  AE    ++    +    
Sbjct: 13  GGPGSGKGTQCQKLVNQYGLVHLSAGD----LLREERASGSKDAELIESIIREGKIVP-- 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                        +    +++ A+ +           S +   G   S  +  LD   ++
Sbjct: 67  ------------SEITVKLLKNAMEKNGW------AKSKFLIDGFPRSQDN--LDGWNQM 106

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
               +     + LD   DI  +R+  R         D  E           + +++  + 
Sbjct: 107 MGHLINFKFVLFLDCSEDIMTQRIMKRAES-SGRSDDNIESLKKRF-----RTYIESTKP 160

Query: 183 -----NQPDRCHIVDSAHSFQSVATNIL 205
                 + ++   V++  S   V   I 
Sbjct: 161 IIDFYAKQNKVITVNAEKSIDEVFEKIR 188


>gi|23502904|ref|NP_699031.1| ABC transporter ATP-binding protein [Brucella suis 1330]
 gi|161619970|ref|YP_001593857.1| ABC transporter related [Brucella canis ATCC 23365]
 gi|163844074|ref|YP_001628478.1| ABC transporter related [Brucella suis ATCC 23445]
 gi|225626435|ref|ZP_03784474.1| ABC transporter, ATP-binding protein [Brucella ceti str. Cudo]
 gi|254705057|ref|ZP_05166885.1| ABC transporter related protein [Brucella suis bv. 3 str. 686]
 gi|254707426|ref|ZP_05169254.1| ABC transporter related protein [Brucella pinnipedialis M163/99/10]
 gi|254709033|ref|ZP_05170844.1| ABC transporter related protein [Brucella pinnipedialis B2/94]
 gi|254713541|ref|ZP_05175352.1| ABC transporter related protein [Brucella ceti M644/93/1]
 gi|254716104|ref|ZP_05177915.1| ABC transporter related protein [Brucella ceti M13/05/1]
 gi|256030558|ref|ZP_05444172.1| ABC transporter related protein [Brucella pinnipedialis M292/94/1]
 gi|256253963|ref|ZP_05459499.1| ABC transporter related protein [Brucella ceti B1/94]
 gi|256370454|ref|YP_003107965.1| ABC transporter, ATP-binding protein [Brucella microti CCM 4915]
 gi|260169463|ref|ZP_05756274.1| ABC transporter, ATP-binding protein [Brucella sp. F5/99]
 gi|260567474|ref|ZP_05837944.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
           40]
 gi|261217875|ref|ZP_05932156.1| ABC transporter [Brucella ceti M13/05/1]
 gi|261221105|ref|ZP_05935386.1| ABC transporter [Brucella ceti B1/94]
 gi|261314911|ref|ZP_05954108.1| ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261316532|ref|ZP_05955729.1| ABC transporter [Brucella pinnipedialis B2/94]
 gi|261321275|ref|ZP_05960472.1| ABC transporter [Brucella ceti M644/93/1]
 gi|261755760|ref|ZP_05999469.1| ABC transporter [Brucella suis bv. 3 str. 686]
 gi|261758990|ref|ZP_06002699.1| ATP/GTP-binding site domain-containing protein A [Brucella sp.
           F5/99]
 gi|265987606|ref|ZP_06100163.1| ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|294851285|ref|ZP_06791958.1| ABC transport system ATP-binding protein [Brucella sp. NVSL
           07-0026]
 gi|23348935|gb|AAN30946.1| ABC transporter, ATP-binding protein [Brucella suis 1330]
 gi|161336781|gb|ABX63086.1| ABC transporter related [Brucella canis ATCC 23365]
 gi|163674797|gb|ABY38908.1| ABC transporter related [Brucella suis ATCC 23445]
 gi|225618092|gb|EEH15135.1| ABC transporter, ATP-binding protein [Brucella ceti str. Cudo]
 gi|256000617|gb|ACU49016.1| ABC transporter, ATP-binding protein [Brucella microti CCM 4915]
 gi|260156992|gb|EEW92072.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str.
           40]
 gi|260919689|gb|EEX86342.1| ABC transporter [Brucella ceti B1/94]
 gi|260922964|gb|EEX89532.1| ABC transporter [Brucella ceti M13/05/1]
 gi|261293965|gb|EEX97461.1| ABC transporter [Brucella ceti M644/93/1]
 gi|261295755|gb|EEX99251.1| ABC transporter [Brucella pinnipedialis B2/94]
 gi|261303937|gb|EEY07434.1| ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261738974|gb|EEY26970.1| ATP/GTP-binding site domain-containing protein A [Brucella sp.
           F5/99]
 gi|261745513|gb|EEY33439.1| ABC transporter [Brucella suis bv. 3 str. 686]
 gi|264659803|gb|EEZ30064.1| ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|294819874|gb|EFG36873.1| ABC transport system ATP-binding protein [Brucella sp. NVSL
           07-0026]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|220932801|ref|YP_002509709.1| ABC transporter related [Halothermothrix orenii H 168]
 gi|219994111|gb|ACL70714.1| ABC transporter related [Halothermothrix orenii H 168]
          Length = 232

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +N G FI   G  G+GKTT +++L    +    +V++  +P  +   ++ R ++    + 
Sbjct: 30  INKGDFIVINGPSGSGKTTLLNILSGVDRPTEGEVYIDGKP-LSELKDSKRTLIRRNKIG 88

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME 89
                 E I    AR    ENV  P L++
Sbjct: 89  LVFQSFELIPVLTAR----ENVEYPLLLQ 113


>gi|304321461|ref|YP_003855104.1| adenylate kinase [Parvularcula bermudensis HTCC2503]
 gi|303300363|gb|ADM09962.1| adenylate kinase [Parvularcula bermudensis HTCC2503]
          Length = 195

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 65/224 (29%), Gaps = 47/224 (20%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + + F G  GAGK T  + +    + +      T         +  R  + +       A
Sbjct: 1   MIVIFLGPPGAGKGTQAAYIA---KSRGIPQLST--------GDMLRAAIKAETPVGLQA 49

Query: 65  EAEAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           +A        R D V          E +  P    G   L D F          R   Q 
Sbjct: 50  KAIIE-----RGDLVSDDVVAGIVAERIDAPDCKPGF--LLDGF---------PRTLGQA 93

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKR 173
             LD + +    ++  D  + L +     + R++ R    +        +  +     + 
Sbjct: 94  QMLDDIVKTKSCDI--DVVLELKVDEGALVDRLRTRIEETKARGEPVRSDDNEEAFRNRL 151

Query: 174 RQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +++ +          +      +D       V+  I  ++  L
Sbjct: 152 -EVYREQTAPLIPFYKEKGLLREIDGMQPIDQVSAEIDKVLDSL 194


>gi|89894819|ref|YP_518306.1| hypothetical protein DSY2073 [Desulfitobacterium hafniense Y51]
 gi|219669258|ref|YP_002459693.1| ABC transporter [Desulfitobacterium hafniense DCB-2]
 gi|89334267|dbj|BAE83862.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539518|gb|ACL21257.1| ABC transporter related [Desulfitobacterium hafniense DCB-2]
          Length = 304

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL 54
           G   +F G  GAGK+T I ++  FL+  +   V    E G        R V+
Sbjct: 29 KGKLFAFLGPNGAGKSTTIDIICTFLKPDRGRVVVDGYELGKED--NKIRSVI 79


>gi|26251177|ref|NP_757217.1| D-gluconate kinase [Escherichia coli CFT073]
 gi|191170623|ref|ZP_03032175.1| thermosensitive gluconokinase [Escherichia coli F11]
 gi|227886678|ref|ZP_04004483.1| thermosensitive gluconokinase [Escherichia coli 83972]
 gi|300972393|ref|ZP_07171926.1| shikimate kinase [Escherichia coli MS 45-1]
 gi|300988086|ref|ZP_07178532.1| shikimate kinase [Escherichia coli MS 200-1]
 gi|301048248|ref|ZP_07195282.1| shikimate kinase [Escherichia coli MS 185-1]
 gi|331660849|ref|ZP_08361781.1| shikimate kinase [Escherichia coli TA206]
 gi|26111609|gb|AAN83791.1|AE016771_302 Thermosensitive gluconokinase [Escherichia coli CFT073]
 gi|190908847|gb|EDV68434.1| thermosensitive gluconokinase [Escherichia coli F11]
 gi|227836251|gb|EEJ46717.1| thermosensitive gluconokinase [Escherichia coli 83972]
 gi|300299870|gb|EFJ56255.1| shikimate kinase [Escherichia coli MS 185-1]
 gi|300305979|gb|EFJ60499.1| shikimate kinase [Escherichia coli MS 200-1]
 gi|300410972|gb|EFJ94510.1| shikimate kinase [Escherichia coli MS 45-1]
 gi|307556438|gb|ADN49213.1| thermosensitive gluconokinase [Escherichia coli ABU 83972]
 gi|315293621|gb|EFU52973.1| shikimate kinase [Escherichia coli MS 153-1]
 gi|315298969|gb|EFU58223.1| shikimate kinase [Escherichia coli MS 16-3]
 gi|324013718|gb|EGB82937.1| shikimate kinase [Escherichia coli MS 60-1]
 gi|331051891|gb|EGI23930.1| shikimate kinase [Escherichia coli TA206]
          Length = 187

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 26/85 (30%), Gaps = 15/85 (17%)

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           + LD   +  L R+Q R        L    FE              L+  ++       +
Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQDDEQDIVRI 149

Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216
           D  H   +V       V  + Q R+
Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174


>gi|327401116|ref|YP_004341955.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
 gi|327316624|gb|AEA47240.1| Signal recognition 54 kDa protein [Archaeoglobus veneficus SNP6]
          Length = 436

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 18/135 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT  + L ++ + K     V       PAA E  + +  S G+  +G +    
Sbjct: 100 GLQGSGKTTTAAKLAKYFKDKGMKTGVIAADTWRPAAYEQLKQLAESYGIGFYGEKE--- 156

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 ++   N ++ AL +  +++ D            R + +   +D + EI+ +   
Sbjct: 157 --NKDAVEIARNGLK-ALKDYDMIIID---------TAGRHALEEELIDEMIEIA-KATQ 203

Query: 130 PDCTIILDLPVDIGL 144
           PD  +++ L   IG 
Sbjct: 204 PDYKLLV-LDAAIGQ 217


>gi|325189971|emb|CCA24454.1| AlNc14C241G9459 [Albugo laibachii Nc14]
          Length = 599

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + I   G++GAGK+T  S+L   L     D   
Sbjct: 237 MVIGILGLDGAGKSTIASILAGELAELGADQVT 269


>gi|330917445|ref|XP_003297819.1| hypothetical protein PTT_08345 [Pyrenophora teres f. teres 0-1]
 gi|311329299|gb|EFQ94085.1| hypothetical protein PTT_08345 [Pyrenophora teres f. teres 0-1]
          Length = 1118

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 14/63 (22%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSCGVD 60
           G F++  G  G+GK+T ++LL+RF            +P         +  R + L+    
Sbjct: 904 GKFVAIVGGSGSGKSTVLALLERF-----------YDPTYGRITLDGQDIRDLHLNSYRQ 952

Query: 61  EFG 63
              
Sbjct: 953 MIS 955


>gi|302753682|ref|XP_002960265.1| hypothetical protein SELMODRAFT_74623 [Selaginella moellendorffii]
 gi|302768052|ref|XP_002967446.1| hypothetical protein SELMODRAFT_87862 [Selaginella moellendorffii]
 gi|300165437|gb|EFJ32045.1| hypothetical protein SELMODRAFT_87862 [Selaginella moellendorffii]
 gi|300171204|gb|EFJ37804.1| hypothetical protein SELMODRAFT_74623 [Selaginella moellendorffii]
          Length = 238

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 17/81 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  + F G+ G+GK++    L+  L       +                 +L      
Sbjct: 38  QKGCIVWFTGLSGSGKSSVACALETRLAALGKLAY-----------------VLDGDNVR 80

Query: 62  FGAEAEAIVFAAARLDHVENV 82
            G  +     AA R +++  V
Sbjct: 81  HGLNSNLGFSAADRAENIRRV 101


>gi|260574292|ref|ZP_05842297.1| Lysine--tRNA ligase [Rhodobacter sp. SW2]
 gi|259023758|gb|EEW27049.1| Lysine--tRNA ligase [Rhodobacter sp. SW2]
          Length = 349

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 25  KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIR 84
           + FL+    D+  T    G+P A+A R  L++ G+     +  + + +      +   + 
Sbjct: 171 EAFLRYAGIDLLATVAADGSPDADALRAALVATGLRATTDDTWSDMLSRV----LVAKVE 226

Query: 85  PALMEGKILLCDRF 98
           P L +G+I + DR+
Sbjct: 227 PHLGQGRITILDRY 240


>gi|240167748|ref|ZP_04746407.1| adenylate kinase [Mycobacterium kansasii ATCC 12478]
          Length = 181

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 62/211 (29%), Gaps = 43/211 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK T    L   L         T         E  R  +      + G EA
Sbjct: 3   VVLLGPPGAGKGTQAQKLAEKL---GIPQIST--------GELFRRNIEDG--TKLGIEA 49

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123
           +  + A   +  D    ++   L             + +   G   S +     +L E +
Sbjct: 50  KRYLSAGDLVPSDLTNELVDDRLNNPD-------AANGFILDGYPRSVEQA--KALHEML 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLD-- 179
             +    D  +   +   + L+R++ R    ++    L+              +++ D  
Sbjct: 101 ERRGTDIDAVLEFRVSEGVLLERLKGRGRADDTDDVILNRM------------KVYRDET 148

Query: 180 --IARNQPDRCHIVDSAHSFQSVATNILNIV 208
             +      +   VD+  +   V    L  +
Sbjct: 149 APLLEYYSSQLKTVDAVGTMDEVFARALQAL 179


>gi|254580319|ref|XP_002496145.1| ZYRO0C11528p [Zygosaccharomyces rouxii]
 gi|238939036|emb|CAR27212.1| ZYRO0C11528p [Zygosaccharomyces rouxii]
          Length = 1510

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 5/53 (9%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            G+ G+GKTT I+ + + L  +   V +T          A  ++LL        
Sbjct: 1043 GMPGSGKTTVIAQIIKILASRGQKVLLTSY-----THSAVDNILLKLKGSPIN 1090


>gi|229191273|ref|ZP_04318260.1| Phosphoribulokinase/uridine kinase [Bacillus cereus ATCC 10876]
 gi|228592190|gb|EEK50022.1| Phosphoribulokinase/uridine kinase [Bacillus cereus ATCC 10876]
          Length = 219

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDE 61
           I   GI G   AGKTT  + L   L +   +   T       +++  +H ++      + 
Sbjct: 20  IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +  A   AA  L  +E  I+  +  G     D +   ++ Y   +  S    +  ++
Sbjct: 77  HRYKMTACHPAAHHLAALERDIQ-MVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVE 130

Query: 122 EISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +S   + P   D  I      +  L R  +R      A + Y  +     HE+RR  + 
Sbjct: 131 GMSAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGADISYLRQS----HEERRIQYE 186

Query: 179 DIARNQPDRCHIV 191
               +   R  I+
Sbjct: 187 VFMHSYSQRFDII 199


>gi|237807997|ref|YP_002892437.1| ABC transporter-like protein [Tolumonas auensis DSM 9187]
 gi|237500258|gb|ACQ92851.1| ABC transporter related [Tolumonas auensis DSM 9187]
          Length = 371

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
          NSG FI   G  G GK+T + ++ 
Sbjct: 28 NSGEFIVIVGPSGCGKSTLLRMIA 51


>gi|213580283|ref|ZP_03362109.1| ABC transporter ATP-binding protein [Salmonella enterica subsp.
          enterica serovar Typhi str. E98-0664]
          Length = 312

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 11 GIEGAGKTTHISLLKRFLQRKN 32
          G +GAGKTT + +L   L+   
Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61


>gi|191167530|ref|ZP_03029342.1| putative lipoprotein [Escherichia coli B7A]
 gi|331669802|ref|ZP_08370647.1| hypothetical ATP-binding protein YghS [Escherichia coli TA271]
 gi|331679059|ref|ZP_08379731.1| hypothetical ATP-binding protein YghS [Escherichia coli H591]
 gi|190902387|gb|EDV62124.1| putative lipoprotein [Escherichia coli B7A]
 gi|331062715|gb|EGI34629.1| hypothetical ATP-binding protein YghS [Escherichia coli TA271]
 gi|331073124|gb|EGI44447.1| hypothetical ATP-binding protein YghS [Escherichia coli H591]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|134080107|emb|CAK46088.1| unnamed protein product [Aspergillus niger]
          Length = 1319

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/25 (64%), Positives = 19/25 (76%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRF 27
            SG F++F G  G GKTT ISLL+RF
Sbjct: 1094 SGQFVAFVGPSGCGKTTVISLLERF 1118


>gi|147902481|ref|NP_001087146.1| guanylate kinase 1 [Xenopus laevis]
 gi|50603755|gb|AAH78071.1| Guk1-prov protein [Xenopus laevis]
          Length = 198

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 79/227 (34%), Gaps = 49/227 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M     +   G  GAGK+T + +L R  +    + V H TR+P                G
Sbjct: 1   MTGPRPVVLSGPSGAGKSTLLKMLMREFEGLFGFSVSHTTRKPR--------------PG 46

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             +        +    R     + I  A+  G +     +  S+ A Q  + ++Q   LD
Sbjct: 47  EVDGKDYHFVTLEDMKRGVERGDFIEHAVFSGNM-----YGTSTAAVQAVQANNQICILD 101

Query: 119 S----LQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                ++ I    + P   I + +    V I  +R+++R +          E ++  + +
Sbjct: 102 IDMQGVKSIKKTRLNP---IYISIHPPSVQILEQRLRDRNT----------ESEE-SLQK 147

Query: 172 KRRQIFLDI-ARNQPDRCHIVDS---AHSFQSVATNILNIVWELVQK 214
           +      D+    +P      D+       +     +  I+ + +++
Sbjct: 148 RLNAAIEDLEISKEPGLF---DAVIVNDDLEEAYNKLKGILAKEIKQ 191


>gi|57641955|ref|YP_184433.1| ABC-type iron(III)-siderophore transport system, ATPase component
          [Thermococcus kodakarensis KOD1]
 gi|57160279|dbj|BAD86209.1| ABC-type iron(III)-siderophore transport system, ATPase component
          [Thermococcus kodakarensis KOD1]
          Length = 248

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          G F++  G  GAGK+T +  L   L+             G P  E +R+ L
Sbjct: 29 GEFVAILGPNGAGKSTLLKCLSGILRCNGV------YISGRPIGEYSRNEL 73


>gi|54025586|ref|YP_119828.1| guanylate kinase [Nocardia farcinica IFM 10152]
 gi|61213314|sp|Q5YTM7|KGUA_NOCFA RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|54017094|dbj|BAD58464.1| putative guanylate kinase [Nocardia farcinica IFM 10152]
          Length = 193

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 6/99 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G  +   G    GK+T +  ++  L    + V   TR P            +     D
Sbjct: 6   RKGRLVVLVGPSAVGKSTVVRCVRERLPELVFSVSATTRAPRPGEVDGRDYRFVTRAEFD 65

Query: 61  EFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILL 94
                 E + +A       R       +R AL  GK +L
Sbjct: 66  AMIEAGELLEWAEIHGGLQRSGTPAAPVREALAAGKNVL 104


>gi|290491138|ref|NP_001166466.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1
           [Cavia porcellus]
 gi|7388021|sp|O54820|PAPS1_CAVPO RecName: Full=Bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1; Short=PAPS synthase 1; Short=PAPSS 1;
           AltName: Full=Sulfurylase kinase 1; Short=SK 1;
           Short=SK1; Includes: RecName: Full=Sulfate
           adenylyltransferase; AltName: Full=ATP-sulfurylase;
           AltName: Full=Sulfate adenylate transferase; Short=SAT;
           Includes: RecName: Full=Adenylyl-sulfate kinase;
           AltName: Full=3'-phosphoadenosine-5'-phosphosulfate
           synthase; AltName: Full=APS kinase; AltName:
           Full=Adenosine-5'-phosphosulfate 3'-phosphotransferase;
           AltName: Full=Adenylylsulfate 3'-phosphotransferase
 gi|2735717|gb|AAC02266.1| 3'-phosphoadenosine 5'-phosphosulfate synthase [Cavia porcellus]
          Length = 624

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L   L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALGEHLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 153 FFEVFVDAPLHVCEQR 168


>gi|2492600|sp|Q24739|BROWN_DROVI RecName: Full=Protein brown
 gi|736327|gb|AAA64466.1| brown protein [Drosophila virilis]
          Length = 668

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          + +G  I+  G  GAGKTT ++ + + L+
Sbjct: 53 LKTGDLIAILGGSGAGKTTLLAAISQRLR 81


>gi|332158885|ref|YP_004424164.1| hypothetical protein PNA2_1245 [Pyrococcus sp. NA2]
 gi|331034348|gb|AEC52160.1| hypothetical protein PNA2_1245 [Pyrococcus sp. NA2]
          Length = 448

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   + V   R P   P  +  + V+      E   + E  +   
Sbjct: 134 GCGKSQTSRKVAQLLQEMGFKVVAVRHP--MPYGDLRKQVVQRFATFEDLDKYECTIEE- 190

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE---VMP 130
                      P L  G ++       +   Y+     ++      L +    +     P
Sbjct: 191 ------REEYEPYLERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFFEP 238

Query: 131 DCTI 134
           D  I
Sbjct: 239 DLWI 242


>gi|319956140|ref|YP_004167403.1| signal recognition particle-docking protein ftsy [Nitratifractor
           salsuginis DSM 16511]
 gi|319418544|gb|ADV45654.1| signal recognition particle-docking protein FtsY [Nitratifractor
           salsuginis DSM 16511]
          Length = 291

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 22/100 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+ GAGKTT I+ L R  Q++   V +    G T  A A          ++   
Sbjct: 88  MII---GVNGAGKTTTIAKLARRYQKEGKSVIL--GAGDTFRAAAI---------EQLSR 133

Query: 65  EAEAIV--FAAARLDH-----VENVIRPALMEG-KILLCD 96
            AE +     A R  H     V + IR AL +G   ++ D
Sbjct: 134 WAEKLQVPIVATRQGHDPSAVVFDTIRSALAKGVDRVIID 173


>gi|315657158|ref|ZP_07910042.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315492261|gb|EFU81868.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 509

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G FI   G  G+GKTT    L
Sbjct: 31 IKKGEFIVISGPSGSGKTTFARCL 54


>gi|315427553|dbj|BAJ49153.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 466

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 15/122 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI+G GKTT  + L  +L+   Y V V       PAA      LL         E E   
Sbjct: 132 GIQGTGKTTTAAKLANYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPE--- 188

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                ++     +      G  +++ D            R   Q   +D ++ +  +E+ 
Sbjct: 189 -NNNPVEIARKGLEHFKQMGVDVVIID---------TAGRHRQQESLMDEMKMLE-KELK 237

Query: 130 PD 131
           PD
Sbjct: 238 PD 239


>gi|312078371|ref|XP_003141709.1| dynein heavy chain [Loa loa]
 gi|307763127|gb|EFO22361.1| dynein heavy chain [Loa loa]
          Length = 2276

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 23/113 (20%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
            G  G+GK+T   +L++ +   N  V + R          AR  LL     +    ++ ++
Sbjct: 1517 GPSGSGKSTIWKVLQKAMALINKPVKIYR----INPKSMARQKLLGYMDIDTREWSDGVL 1572

Query: 71   FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             AAAR      V+R +      ++CD                   ++++L  +
Sbjct: 1573 TAAAR-----EVVRDS-SVSAWIICD-------------GDIDPEWIEALNSV 1606


>gi|304389905|ref|ZP_07371862.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304326798|gb|EFL94039.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 509

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G FI   G  G+GKTT    L
Sbjct: 31 IKKGEFIVISGPSGSGKTTFARCL 54


>gi|269796234|ref|YP_003315689.1| adenylate kinase [Sanguibacter keddieii DSM 10542]
 gi|269098419|gb|ACZ22855.1| Adenylate kinase [Sanguibacter keddieii DSM 10542]
          Length = 194

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 43/218 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + L   L     +   T         +  R  +   G  E G  A
Sbjct: 5   IVLLGPPGAGKGTQAARLAESLS---IEAIST--------GDIFRANIK--GETELGQLA 51

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS-V 125
           +      A+ + V + +  A++  K+        +     GE+      +  ++ +++ +
Sbjct: 52  QQ---YTAKGELVPDEVTNAMVRDKL--------AGKVAAGEQGFILDGYPRNVAQVAEL 100

Query: 126 QEVMPDC--TII----LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
             ++ D   TI     +    ++ ++R+  R  +   A     + + V+ H     ++ +
Sbjct: 101 DAILADLGLTIDGAVEITADPEVVVERLLGRAEIEGRAD----DTEPVIRHR--LSVYAE 154

Query: 180 ----IARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211
               IA    DR     VD   S   V   +L+ + +L
Sbjct: 155 QTAPIAALYADRDALAQVDGIGSVDEVTARLLSALDQL 192


>gi|297588143|ref|ZP_06946787.1| polyphosphate kinase 2 [Finegoldia magna ATCC 53516]
 gi|297574832|gb|EFH93552.1| polyphosphate kinase 2 [Finegoldia magna ATCC 53516]
          Length = 286

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 31/202 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ +  + ++ AGK + +  +   L      V   ++P      E   H  L      
Sbjct: 56  KRGILVVLQAMDAAGKDSLVKKVFTALNPAGCKVTSFKQPST----EELDHDYLWRITKA 111

Query: 62  FGAEAEAIVFAAARLD-----HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +  E  +F  +  +      V N++     +       RF D + A++   D++    
Sbjct: 112 TPSYGEVGIFNRSHYEDVLVTRVHNLVNKKNDDDFW--NKRFEDIN-AFEKYLDNNGIKV 168

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHEK 172
           +                  L +  D   +R+ +R +L E     A  D  ER++   + K
Sbjct: 169 VK---------------FFLHVSKDEQKERLLDRINLDEKHWKFAASDILERENWDDYHK 213

Query: 173 RRQIFLDIARNQPDRCHIVDSA 194
             +  L+         ++V + 
Sbjct: 214 AYEDMLEHTSTDYAPWYVVPAD 235


>gi|298528469|ref|ZP_07015873.1| guanylate kinase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512121|gb|EFI36023.1| guanylate kinase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 207

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 1  MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41
          MN  G+ +      GAGK+T I +L R      + V + TR+P
Sbjct: 1  MNPKGILLVISAPSGAGKSTLIRMLCRDYPGFGFSVSYTTRKP 43


>gi|167044950|gb|ABZ09615.1| putative SRP54-type protein, GTPase domain protein [uncultured
           marine crenarchaeote HF4000_APKG8G2]
          Length = 605

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 22/110 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARH---------VLL 55
            I F GI G GKTT I+ +   LQ+    V V         A E  R          +  
Sbjct: 107 LILFVGINGTGKTTTIAKIANLLQKNKISVVVAAADTFRAGAIEQLREHINKLNLKLIAQ 166

Query: 56  SCGVDEFGAEAEAIVFA------------AARLDHVENVIRPALMEGKIL 93
           + G D      +A+++A            A R+   +N++       K++
Sbjct: 167 NYGSDPAAVAHDALLYAKSHKVDCVLIDSAGRMQTNKNLMEQIAKISKVV 216


>gi|118498159|ref|YP_899209.1| cell division protein, signal recognition particle GTPase
           [Francisella tularensis subsp. novicida U112]
 gi|118424065|gb|ABK90455.1| cell division protein, signal recognition particle GTPase
           [Francisella novicida U112]
          Length = 331

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R    +        + E  
Sbjct: 134 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GNRNNTHVVYQHE-- 190

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 191 --GADSASVIYDAISSAKSKGIDVVIAD 216


>gi|110765304|ref|XP_396202.3| PREDICTED: ATP-binding cassette sub-family B member 7,
           mitochondrial [Apis mellifera]
          Length = 744

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 10/57 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLS 56
           ++SG  I+  G  G GKTT + LL RF + ++         GG        R + L 
Sbjct: 512 ISSGKKIAIVGGSGCGKTTLVRLLYRFFEPQS---------GGIYINGHNIRDIDLD 559


>gi|94495088|ref|ZP_01301669.1| Sulfate adenylyltransferase, large subunit [Sphingomonas sp. SKA58]
 gi|94425354|gb|EAT10374.1| Sulfate adenylyltransferase, large subunit [Sphingomonas sp. SKA58]
          Length = 637

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L R N                     LL       G   + 
Sbjct: 474 FTGLSGAGKSTIANLVEKKLARMNRHTF-----------------LLDGDNVRHGLNKDL 516

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R++++     V +     G I++ 
Sbjct: 517 GFTDADRVENIRRVGEVAKLMTDAGLIVIT 546


>gi|54308141|ref|YP_129161.1| cytochrome c biogenesis protein CcmA [Photobacterium profundum SS9]
 gi|61211507|sp|Q6LTL7|CCMA_PHOPR RecName: Full=Cytochrome c biogenesis ATP-binding export protein
           CcmA; AltName: Full=Heme exporter protein A
 gi|46912569|emb|CAG19359.1| Putative heme exporter protein A [Photobacterium profundum SS9]
          Length = 216

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++SG  I  EG  GAGKTT + ++    +  +  V    E   +   +  + +L      
Sbjct: 24  ISSGELIQIEGHNGAGKTTLLRIIAGLGRADSGQVCWKSEGIESAREDYYQDLLFLGHQT 83

Query: 61  ----EFGAEAEAIVFAAARLDHVEN 81
               E  A      F A   + ++ 
Sbjct: 84  GVKRELTAYENLAFFQAMHNESIDQ 108


>gi|84498340|ref|ZP_00997137.1| signal recognition particle protein [Janibacter sp. HTCC2649]
 gi|84381840|gb|EAP97723.1| signal recognition particle protein [Janibacter sp. HTCC2649]
          Length = 536

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L R+L+ + +   + 
Sbjct: 107 GLQGAGKTTLAGKLARWLKDQGHTPILV 134


>gi|69246014|ref|ZP_00603763.1| Deoxyguanosine kinase [Enterococcus faecium DO]
 gi|257879209|ref|ZP_05658862.1| deoxyguanosine kinase [Enterococcus faecium 1,230,933]
 gi|257881973|ref|ZP_05661626.1| deoxyguanosine kinase [Enterococcus faecium 1,231,502]
 gi|257890039|ref|ZP_05669692.1| deoxyguanosine kinase [Enterococcus faecium 1,231,410]
 gi|258615606|ref|ZP_05713376.1| deoxyguanosine kinase [Enterococcus faecium DO]
 gi|260558657|ref|ZP_05830846.1| deoxyguanosine kinase [Enterococcus faecium C68]
 gi|261208857|ref|ZP_05923294.1| deoxyguanosine kinase [Enterococcus faecium TC 6]
 gi|289565716|ref|ZP_06446160.1| deoxyguanosine kinase [Enterococcus faecium D344SRF]
 gi|293553422|ref|ZP_06674053.1| deoxyguanosIne kinase [Enterococcus faecium E1039]
 gi|293559499|ref|ZP_06676036.1| deoxyguanosIne kinase [Enterococcus faecium E1162]
 gi|293567377|ref|ZP_06678726.1| deoxyguanosine kinase [Enterococcus faecium E1071]
 gi|294616891|ref|ZP_06696625.1| deoxyguanosIne kinase [Enterococcus faecium E1636]
 gi|294619624|ref|ZP_06699049.1| deoxyguanosIne kinase [Enterococcus faecium E1679]
 gi|294621830|ref|ZP_06700988.1| deoxyguanosIne kinase [Enterococcus faecium U0317]
 gi|314948253|ref|ZP_07851646.1| deoxynucleoside kinase [Enterococcus faecium TX0082]
 gi|68195467|gb|EAN09912.1| Deoxyguanosine kinase [Enterococcus faecium DO]
 gi|257813437|gb|EEV42195.1| deoxyguanosine kinase [Enterococcus faecium 1,230,933]
 gi|257817631|gb|EEV44959.1| deoxyguanosine kinase [Enterococcus faecium 1,231,502]
 gi|257826399|gb|EEV53025.1| deoxyguanosine kinase [Enterococcus faecium 1,231,410]
 gi|260075116|gb|EEW63429.1| deoxyguanosine kinase [Enterococcus faecium C68]
 gi|260077359|gb|EEW65079.1| deoxyguanosine kinase [Enterococcus faecium TC 6]
 gi|289162463|gb|EFD10319.1| deoxyguanosine kinase [Enterococcus faecium D344SRF]
 gi|291589894|gb|EFF21693.1| deoxyguanosine kinase [Enterococcus faecium E1071]
 gi|291590276|gb|EFF22051.1| deoxyguanosIne kinase [Enterococcus faecium E1636]
 gi|291594135|gb|EFF25584.1| deoxyguanosIne kinase [Enterococcus faecium E1679]
 gi|291598613|gb|EFF29672.1| deoxyguanosIne kinase [Enterococcus faecium U0317]
 gi|291602435|gb|EFF32656.1| deoxyguanosIne kinase [Enterococcus faecium E1039]
 gi|291606561|gb|EFF35958.1| deoxyguanosIne kinase [Enterococcus faecium E1162]
 gi|313645301|gb|EFS09881.1| deoxynucleoside kinase [Enterococcus faecium TX0082]
          Length = 233

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 42/228 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++   +L + +  K         P      +     L     +++    
Sbjct: 4   ILISGTIGAGKSSLTDMLAKEIDSK---------PFYENVEDNEVLPLFYSNPEQYAFLL 54

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLD------- 118
           +        L      ++ AL+    +L DR +   S  +    D  +   ++       
Sbjct: 55  QIFFLNKRFLA-----MKNALVNDDNVL-DRSIYEDSLLFHLNADLGRVTDIEVQQYDSL 108

Query: 119 ---SLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-----YFERKDVM 168
               L E+     +  PD  + + + +D  L+R++ R    E    D     Y+E     
Sbjct: 109 LDTMLNELDDVAPKKRPDLMVHIKVSLDTMLERIKKRGRDYEQLESDETLYTYYE----T 164

Query: 169 IHEKRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ +  Q + D       +   D+   V++    + V   I   + EL
Sbjct: 165 LNTRYNQWYEDFDVCPKIQVDGDKFDFVENPEDAKKVIRQIQEKLAEL 212


>gi|317470639|ref|ZP_07930024.1| ABC transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316901774|gb|EFV23703.1| ABC transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 234

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
          SG  I   G  G+GK+T I L+   L     ++    +P G  + E  
Sbjct: 31 SGRIIGLLGPNGSGKSTLIKLINGLLTATEGEILFDSQPLGIHSREHI 78


>gi|304395885|ref|ZP_07377767.1| conserved hypothetical protein [Pantoea sp. aB]
 gi|304356254|gb|EFM20619.1| conserved hypothetical protein [Pantoea sp. aB]
          Length = 207

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 33/152 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT---REPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           GI  +GK+T    L +      + V      +EP     A   R         + G    
Sbjct: 15  GIPASGKSTLTHALSQHF---GWPVLTLDSLKEPFMHAFAPVDRQ-----RNRQLG---- 62

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 A    + N++  A      L+     D+ + +Q      Q L    ++E+    
Sbjct: 63  -----CAAYQAIWNIVEQAPASQVWLI-----DAWFGFQPRALLEQGLQQAGVEEV---- 108

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                 + L +  ++ + R Q R + R     
Sbjct: 109 ----LELWLKIEPEVAVARYQARLTQRLPGHP 136


>gi|290889852|ref|ZP_06552939.1| hypothetical protein AWRIB429_0329 [Oenococcus oeni AWRIB429]
 gi|290480462|gb|EFD89099.1| hypothetical protein AWRIB429_0329 [Oenococcus oeni AWRIB429]
          Length = 952

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI+  G+ G+GK+T ++ +LKR L++K
Sbjct: 633 GKFIAVTGVSGSGKSTLVNSILKRALKQK 661


>gi|208780176|ref|ZP_03247518.1| signal recognition particle-docking protein FtsY [Francisella
           novicida FTG]
 gi|208743825|gb|EDZ90127.1| signal recognition particle-docking protein FtsY [Francisella
           novicida FTG]
          Length = 331

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R    +        + E  
Sbjct: 134 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GNRNNTHVVYQHE-- 190

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 191 --GADSASVIYDAISSAKSKGIDVVIAD 216


>gi|188495935|ref|ZP_03003205.1| putative lipoprotein [Escherichia coli 53638]
 gi|188491134|gb|EDU66237.1| putative lipoprotein [Escherichia coli 53638]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|134301331|ref|YP_001121299.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. tularensis WY96-3418]
 gi|187931064|ref|YP_001891048.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. mediasiatica FSC147]
 gi|224456359|ref|ZP_03664832.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|134049108|gb|ABO46179.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. tularensis WY96-3418]
 gi|187711973|gb|ACD30270.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. mediasiatica FSC147]
 gi|282158413|gb|ADA77804.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 331

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R             + E  
Sbjct: 134 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 190

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 191 --GADSASVIYDAIGSAKSKGIDVVIAD 216


>gi|118587559|ref|ZP_01544983.1| excinuclease ABC, A subunit [Oenococcus oeni ATCC BAA-1163]
 gi|118432010|gb|EAV38752.1| excinuclease ABC, A subunit [Oenococcus oeni ATCC BAA-1163]
          Length = 952

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI+  G+ G+GK+T ++ +LKR L++K
Sbjct: 633 GKFIAVTGVSGSGKSTLVNSILKRALKQK 661


>gi|88601591|ref|YP_501769.1| ABC transporter-like protein [Methanospirillum hungatei JF-1]
 gi|88187053|gb|ABD40050.1| ABC transporter related protein [Methanospirillum hungatei JF-1]
          Length = 339

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          M SG  I   G  G+GK+T +  +   L   + +V ++
Sbjct: 31 MKSGELICLVGPNGSGKSTLLKTITGLLPPLDGEVFLS 68


>gi|33864407|ref|NP_895967.1| ABC transporter, multidrug efflux type [Prochlorococcus marinus
           str. MIT 9313]
 gi|33641187|emb|CAE22317.1| ABC transporter, multidrug efflux type [Prochlorococcus marinus
           str. MIT 9313]
          Length = 656

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 27/53 (50%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           N G FI+  G  G+GK+T + +L  F + +N ++    +P      E+ R  +
Sbjct: 446 NPGEFIALVGPSGSGKSTIVRMLLGFGKPENGEIRYDNQPLNGLRIESLRRQI 498


>gi|14521377|ref|NP_126853.1| adenylylsulfate kinase [Pyrococcus abyssi GE5]
 gi|7387598|sp|P56858|CYSC_PYRAB RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS
          kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|5458595|emb|CAB50083.1| cysC adenylylsulfate kinase (EC 2.7.1.25) APS kinase [Pyrococcus
          abyssi GE5]
          Length = 174

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV 35
          G  GAGKTT    L + L+   Y V
Sbjct: 10 GPSGAGKTTLAVKLAKKLREMGYKV 34


>gi|113971404|ref|YP_735197.1| adenylylsulfate kinase [Shewanella sp. MR-4]
 gi|123324742|sp|Q0HFM7|CYSC_SHESM RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|113886088|gb|ABI40140.1| adenylylsulfate kinase [Shewanella sp. MR-4]
          Length = 205

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+R L    +  +                 LL       G   + 
Sbjct: 29  FTGLSGAGKSTLAGALERALFEAGFHTY-----------------LLDGDNVRHGLCKDL 71

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 72  GFSVADRDENLRRVGEVAKLMVDAGLVVLS 101


>gi|332185163|ref|ZP_08386912.1| adenylylsulfate kinase [Sphingomonas sp. S17]
 gi|332014887|gb|EGI56943.1| adenylylsulfate kinase [Sphingomonas sp. S17]
          Length = 637

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L+++ L                         LL       G   + 
Sbjct: 468 FTGLSGSGKSTIANLVEQKLHSMGRH-----------------SFLLDGDNIRHGLNRDL 510

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++++     V +     G I+L         A+     + + +    L E   
Sbjct: 511 DFSEAGRVENIRRVGEVAKLMADAGLIVLT--------AFISPFKAERDMVRALLSEGEF 562

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            E      I +D P+ +   R
Sbjct: 563 VE------IFIDTPLAVAEDR 577


>gi|322386029|ref|ZP_08059669.1| nodulation ATP-binding protein I [Streptococcus cristatus ATCC
           51100]
 gi|321270012|gb|EFX52932.1| nodulation ATP-binding protein I [Streptococcus cristatus ATCC
           51100]
          Length = 326

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 79/222 (35%), Gaps = 37/222 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           + SG F    G  GAGK+T I +L   LQ  +  +    +   T      ++ +L   + 
Sbjct: 63  IKSGSFTVILGPNGAGKSTTIQMLIGLLQSTSGQIIYAEQ---TKLGVVFQNSVLDANLT 119

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                         R    + V    + +    L ++   +S+A Q     S        
Sbjct: 120 VIEN-------LRIRAKQYKQVETGKIEQ----LIEQLGLASFAKQRYGTLSGGQKRRV- 167

Query: 121 QEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQ 175
            +I+   +  PD  + LD     GL  +Q R S+ +    D  +++     +  H     
Sbjct: 168 -DIARALLNSPDL-LFLD-EPTTGLD-IQTRESIWKLLK-DLQQKEKMTVVLTTH----- 217

Query: 176 IFLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWELV 212
            +L+ A +  D+ +IVD     +  S   +       V  ++
Sbjct: 218 -YLNEA-DDADKIYIVDHGQVIAQGSADQIKERYARNVLRIL 257


>gi|312144227|ref|YP_003995673.1| adenylate kinase [Halanaerobium sp. 'sapolanicus']
 gi|311904878|gb|ADQ15319.1| adenylate kinase [Halanaerobium sp. 'sapolanicus']
          Length = 216

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 39/168 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GK T   +L++ L         T         +  R  +        G +A
Sbjct: 3   IVLLGLPGVGKGTQAKMLEKTL---GIPHIAT--------GDIFRKAIKKK--TALGKKA 49

Query: 67  EAIVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E+ + A    + V + I           P   EG  ++ D F          R   Q   
Sbjct: 50  ESFIEA---GELVPDEITIGIVKERLSEPDCEEG--MILDGF---------PRTIKQAEA 95

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
           LD++     + +  D +I L    ++ +KR+  R    +     + E 
Sbjct: 96  LDNILAEQNRGL--DISIFLQAEKEVLIKRLSGRRVCVDCGATYHIEN 141


>gi|308322207|gb|ADO28241.1| adenylate kinase isoenzyme 1 [Ictalurus furcatus]
          Length = 194

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 63/213 (29%), Gaps = 38/213 (17%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+   G  G+GK T    +                     + +  R  + S        +
Sbjct: 12  FVV--GGPGSGKGTQCEKVVEK-----------YGYTHLSSGDLLRAEVASGSERGNQLQ 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           A         LD V ++I+ A++    +    +L   Y             +   +E   
Sbjct: 59  AIMQKGELVPLDTVLDMIKDAMIAKADV-SKGYLIDGY----------PREVKQGEEFEK 107

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEK----RRQIFL 178
           +   P   + +D   +  ++R+  R     S   D  E   +K + ++ K        + 
Sbjct: 108 KIGAPALLLYIDAKSETMVQRLLKRGQT--SGRADDNEETIKKRLDLYYKATEPVIAFYE 165

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                  D    +DS      V   +   + +L
Sbjct: 166 SR-----DIVRKIDSELPVDEVFKQVSQAIDKL 193


>gi|304390999|ref|ZP_07372951.1| adenylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304325882|gb|EFL93128.1| adenylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 193

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 59/223 (26%), Gaps = 57/223 (25%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK TH   +                       +  R             + E
Sbjct: 6   VIMGPPGAGKGTHAKEIATHFH-----------IPWISTGDIFRK--------HKAEKTE 46

Query: 68  AIVFAAARLDHVENVIRPALMEGKIL---LCDR--------------FLDSSYAYQGERD 110
                         +I   + +G+ +   + DR              FL   Y     + 
Sbjct: 47  L-----------GKLIESYIDKGEFVPDSVTDRIVCERISQSDATAGFLLDGYPRSIPQA 95

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVM 168
                 L    E        D  I LD+      +R+  R  +  R     +  + +  +
Sbjct: 96  KVLKAVLAEANEQV------DAAIYLDVSAAEVKQRLLKRAEIEGRTDDTPEVIDHRLEV 149

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             E   Q  LD    +      VD   +   +A  +L ++ E+
Sbjct: 150 FFEAT-QPLLDFYEQE-GVLRKVDGEGTIAEIAQRLLTVMEEI 190


>gi|284098577|ref|ZP_06385956.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283830441|gb|EFC34639.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 584

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 64/215 (29%), Gaps = 64/215 (29%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  + +++ L                         +L       G   +   
Sbjct: 416 GLSGAGKSTTANAVEQRLHALGRH-----------------SYVLDGDNLRHGLTRDLGF 458

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A R+++V     V +  +  G I+L      S  +   +        ++  + I    
Sbjct: 459 IPADRVENVRRIAEVAKLFVDAGLIVLV-----SVISPFRDEREMARRMMEEGEFIE--- 510

Query: 128 VMPDCTIILDLPVDI-------GLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLD 179
                 + +D P+++       GL R      ++    +D  +E                
Sbjct: 511 ------VFVDAPLEVCERRDPKGLYRKARAGEIKNFTGIDSPYE---------------- 548

Query: 180 IARNQPDR--CHIVDSAHSFQSVATNILNIVWELV 212
                P+R    +     S   +A  ++  +   V
Sbjct: 549 ----PPERPDIVLKTGERSVDELADQVIAYLRSRV 579


>gi|229030859|ref|ZP_04186880.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH1271]
 gi|228730457|gb|EEL81416.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH1271]
          Length = 219

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 70/193 (36%), Gaps = 21/193 (10%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDE 61
           I   GI G   AGKTT  + L   L +   +   T       +++  +H ++      + 
Sbjct: 20  IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +  A   AA  L  +E  I+  +  G     D +   ++ Y   +  S    +  ++
Sbjct: 77  HRYKMTACHPAAHHLAALERDIQ-MVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVE 130

Query: 122 EISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +S   + P   D  I      +  + R  +R      A ++Y  +     HE+RR  + 
Sbjct: 131 GMSAAFINPDLFDLKIYFYTDGETEIMRRSSRDIAERGADINYLRQS----HEERRIQYE 186

Query: 179 DIARNQPDRCHIV 191
               +   R  I+
Sbjct: 187 VFMHSYSQRFDII 199


>gi|225865291|ref|YP_002750669.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB102]
 gi|225787232|gb|ACO27449.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB102]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|225712658|gb|ACO12175.1| KTI12 homolog [Lepeophtheirus salmonis]
          Length = 283

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 15/92 (16%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   GI  +GKTT    L+ F +  K   V +  E            +     V++   
Sbjct: 3  LIIITGIPSSGKTTTAHKLRDFFEGEKGKKVMIVSELNDQTP--QRNDIYKDSAVEKTVR 60

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           A             ++ I   L +  I++ D
Sbjct: 61 SA------------FKSEILRILNKEDIIIAD 80


>gi|289581215|ref|YP_003479681.1| PilT protein domain protein [Natrialba magadii ATCC 43099]
 gi|289530768|gb|ADD05119.1| PilT protein domain protein [Natrialba magadii ATCC 43099]
          Length = 631

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ IS  G  GAGK+T    + RF+   +Y V    +P              +    E
Sbjct: 262 QRGVLIS--GAPGAGKSTFAQAVARFISNHDYAVKTMEKPRDLQVGPEITQY--TELGGE 317

Query: 62  FGAEAEAIVF 71
               A+A++ 
Sbjct: 318 MAKTADALLM 327


>gi|195122076|ref|XP_002005538.1| GI19015 [Drosophila mojavensis]
 gi|193910606|gb|EDW09473.1| GI19015 [Drosophila mojavensis]
          Length = 665

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          + +G  I+  G  GAGKTT ++ + + L+
Sbjct: 50 LKTGDLIAILGGSGAGKTTLLAAISQRLR 78


>gi|182680098|ref|YP_001834244.1| hypothetical protein Bind_3195 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635981|gb|ACB96755.1| protein of unknown function DUF344 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 309

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG +GAGK   I  L   L  ++  +     P    A E                  
Sbjct: 92  ILFEGRDGAGKGGTIQRLTEHLNPRSVRIVALAAPTPREAGEW----------------- 134

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    ++H+         +G+I++ DR   
Sbjct: 135 ----YFQRYIEHLPT-------KGEIVVLDRSWY 157


>gi|167627429|ref|YP_001677929.1| hypothetical protein Fphi_1203 [Francisella philomiragia subsp.
          philomiragia ATCC 25017]
 gi|241667999|ref|ZP_04755577.1| hypothetical protein FphipA2_04479 [Francisella philomiragia
          subsp. philomiragia ATCC 25015]
 gi|254876533|ref|ZP_05249243.1| conserved hypothetical protein [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
 gi|167597430|gb|ABZ87428.1| conserved hypothetical protein [Francisella philomiragia subsp.
          philomiragia ATCC 25017]
 gi|254842554|gb|EET20968.1| conserved hypothetical protein [Francisella philomiragia subsp.
          philomiragia ATCC 25015]
          Length = 269

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          N  + I FEG + AGK   I  +   L  +   V    +P 
Sbjct: 51 NKKVLIIFEGRDAAGKGGTIKRVMEHLNPRGAKVIALEKPS 91


>gi|148977807|ref|ZP_01814363.1| adenylylsulfate kinase [Vibrionales bacterium SWAT-3]
 gi|145963021|gb|EDK28291.1| adenylylsulfate kinase [Vibrionales bacterium SWAT-3]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +  Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGSGKSTVAGALENRLAQLGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|126697120|ref|YP_001092006.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus str. MIT 9301]
 gi|189036396|sp|A3PF80|PANCY_PROM0 RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantothenate synthetase;
           Short=PS; AltName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; Includes:
           RecName: Full=Cytidylate kinase; Short=CK; AltName:
           Full=Cytidine monophosphate kinase; Short=CMP kinase
 gi|126544163|gb|ABO18405.1| putative bifunctional enzyme; pantothenate synthetase/cytidylate
           kinase [Prochlorococcus marinus str. MIT 9301]
          Length = 510

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 9/65 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---------HVTREPGGTPAAEAAR 51
           M     I+ +G  G+GK+T   L+ + L     D           + +E       +  +
Sbjct: 279 MKRRPIIAIDGPAGSGKSTVTKLIAKKLNLLYLDTGAMYRALSWLIIKESVDYKIEKKLQ 338

Query: 52  HVLLS 56
           ++L  
Sbjct: 339 NILKD 343


>gi|320101340|ref|YP_004176932.1| cytidylate kinase [Desulfurococcus mucosus DSM 2162]
 gi|319753692|gb|ADV65450.1| cytidylate kinase [Desulfurococcus mucosus DSM 2162]
          Length = 181

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRF 27
          I F G  G+GKTT    +  +
Sbjct: 4  IVFSGPPGSGKTTQAKRVAEY 24


>gi|257876591|ref|ZP_05656244.1| iron compound ABC transporter [Enterococcus casseliflavus EC20]
 gi|257810757|gb|EEV39577.1| iron compound ABC transporter [Enterococcus casseliflavus EC20]
          Length = 267

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          M  G  I   G  G+GK+T +  L R LQ  + +V +
Sbjct: 30 MPEGKIIGLIGPNGSGKSTFLKALARILQPLSGEVLL 66


>gi|308189714|ref|YP_003922645.1| cytidylate kinase [Mycoplasma fermentans JER]
 gi|319776900|ref|YP_004136551.1| cytidylate kinase [Mycoplasma fermentans M64]
 gi|238809686|dbj|BAH69476.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624456|gb|ADN68761.1| cytidylate kinase [Mycoplasma fermentans JER]
 gi|318037975|gb|ADV34174.1| Cytidylate kinase [Mycoplasma fermentans M64]
          Length = 228

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 83/242 (34%), Gaps = 59/242 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63
           I+ +G  GAGK+T    + R L    Y        G    A A    LL       +E  
Sbjct: 9   IAIDGPCGAGKSTVSQEVARRL---GYTFI---NSGSVYRALALNAKLLGVDWNNEEEIN 62

Query: 64  AEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              E  +      +++   E  +   + E  I     +  S+ A        +   ++ +
Sbjct: 63  KTLEKDIITLDERENIFLREKNVSVEIREDSI----SYGSSTIA---TYKKVRQYVVNLI 115

Query: 121 QEI-------------SVQEVMP--DCTIILDLPVDI-GLKRVQNRYS----------LR 154
           Q I             +  ++MP  +  I L    +   ++R+    +          L 
Sbjct: 116 QNITKKGKGYIMDGRDTTFKIMPYAELKIFLTATPEERAMRRLNQNIALGFNMDYNKVLE 175

Query: 155 ESACLDYFE-RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWELV 212
           E    DY +  ++V    K ++     A+        +D  +  F++V   I+ +V + +
Sbjct: 176 EVKLRDYQDMNREVDPLHKVKE-----AKE-------IDCTNMGFEAVVVEIIELVKKTI 223

Query: 213 QK 214
           +K
Sbjct: 224 EK 225


>gi|238899311|ref|YP_002924994.1| cell division protein: membrane binding (N-terminal); GTPase domain
           (C-terminal) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229467072|gb|ACQ68846.1| cell division protein: membrane binding (N-terminal); GTPase domain
           (C-terminal) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 375

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L+++   V +    G T  A A   + +    ++    A+   
Sbjct: 175 GVNGVGKTTTIGKLAHQLRQQGLSVLLAA--GDTFRAAATEQLKIWGERNQIPVVAQHD- 231

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  ++L D
Sbjct: 232 -GADSASVIFDAVQSAKARGIDVVLAD 257


>gi|255547602|ref|XP_002514858.1| Dephospho-CoA kinase, putative [Ricinus communis]
 gi|223545909|gb|EEF47412.1| Dephospho-CoA kinase, putative [Ricinus communis]
          Length = 232

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 72/228 (31%), Gaps = 64/228 (28%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+ G   +GK+T  +L     +     V           A+     +L      +     
Sbjct: 5   GLTGGIASGKSTVSNL----FKSHGIPVV---------DADLVARDVLKKDTGGYNKVVA 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL----FLDSLQEI 123
           A  F    L     V RP L  G+I+  D    S+   Q              L  + ++
Sbjct: 52  A--FGEDVLLANGEVDRPKL--GRIVFSD---PSN--RQLLNRLLAPYISSGILYEILKL 102

Query: 124 SVQEVMPDCTIILDLPV--------------------DIGLKRVQNRYSLRESACLDYFE 163
            ++       I+LD+P+                    +  L+R+  R    E    +   
Sbjct: 103 WLKGCK---VIVLDIPLLFETKMDKWTKPIVVVWVDNETQLQRLMARDGTNEEDARNRIN 159

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +            LD+ R++ D   ++D+  S   +      +++++
Sbjct: 160 AQMP----------LDVKRSKAD--IVIDNTGSLDDLEEQFRKVLFQV 195


>gi|294655219|ref|XP_457323.2| DEHA2B08426p [Debaryomyces hansenii CBS767]
 gi|199429779|emb|CAG85327.2| DEHA2B08426p [Debaryomyces hansenii]
          Length = 506

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 20/157 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKT+    + + + +  + V ++ +    P ++  R    S   D    ++  + 
Sbjct: 63  GNSGSGKTSLSQKIIQEINQP-WTVLLSFDNFYNPLSQEERQKAFSNEFDFDTPDSLDL- 120

Query: 71  FAAARLDHVENVIRPALMEGK---ILLC-----DRFLDSSYAYQGERDSSQHLFLDSLQE 122
                 D + NV++ +L  G+   I +      DR   ++  Y    +      + +L +
Sbjct: 121 ------DLLYNVVK-SLKSGEKTEIPIYSFTKHDRTDKTTTIY--GANVIVIEGIYALYD 171

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
             + ++M D  I +D  +DI L R   R  L     L
Sbjct: 172 QRLLDLM-DIKIYVDTDLDICLARRLTRDILYRGRDL 207


>gi|254420822|ref|ZP_05034546.1| sulfate adenylyltransferase, large subunit subfamily, putative
           [Brevundimonas sp. BAL3]
 gi|196186999|gb|EDX81975.1| sulfate adenylyltransferase, large subunit subfamily, putative
           [Brevundimonas sp. BAL3]
          Length = 637

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 20/96 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ GAGK+T   L+++ L       +                 LL      
Sbjct: 458 QKGRVIWLTGLSGAGKSTIADLVEKRLYADGRHTY-----------------LLDGDNVR 500

Query: 62  FGAEAEAIVFAAARLD---HVENVIRPALMEGKILL 94
            G   +       R++    V  V +  +  G I+L
Sbjct: 501 HGLNRDLGFTEEDRVENIRRVAEVSKLMVDAGLIVL 536


>gi|196032428|ref|ZP_03099842.1| ABC transporter, ATP-binding protein [Bacillus cereus W]
 gi|195995179|gb|EDX59133.1| ABC transporter, ATP-binding protein [Bacillus cereus W]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|161527904|ref|YP_001581730.1| signal recognition particle-docking protein FtsY [Nitrosopumilus
           maritimus SCM1]
 gi|160339205|gb|ABX12292.1| signal recognition particle-docking protein FtsY [Nitrosopumilus
           maritimus SCM1]
          Length = 513

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 17/133 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFG 63
             I F GI G GKTT ++ +   LQ++ Y V V         A E  R        +   
Sbjct: 106 FLILFLGINGTGKTTSLAKVAHMLQQEKYSVVVAAADTFRAGAIEQLRE-----HTNRLN 160

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +  A  + +       + +  A      ++L D            R  +    +  +++
Sbjct: 161 LKLVAQNYNSDPAAVARDAVLYAKSHKTDVVLID---------TAGRMQTSENLMQQIEK 211

Query: 123 ISVQEVMPDCTII 135
           I  + V PD  I 
Sbjct: 212 I-TKVVNPDLKIF 223


>gi|119487883|ref|ZP_01621380.1| ABC transporter-like protein [Lyngbya sp. PCC 8106]
 gi|119455459|gb|EAW36597.1| ABC transporter-like protein [Lyngbya sp. PCC 8106]
          Length = 339

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 48/216 (22%)

Query: 11  GIEGAGKTTHISLLKR-------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT +  L          L+    +V              ++ V L   +    
Sbjct: 37  GPNGAGKTTTLRALCTLITPDSGRLEVSGVNVVEKPRQARQRLGYVSQEVALDKVLTGR- 95

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +   AA       +I+  + +   LL      + +A Q     S    +    ++
Sbjct: 96  ---EHLQLQAALYHLPRPMIKDRIAKAINLLG----LAEWADQKSGTYSGG--IRKRLDL 146

Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI------ 176
           +   +  PD  ++LD    +GL  +++R ++                  + RQ       
Sbjct: 147 AAGLLHQPD-VLVLD-EPTVGLD-IESRVAV-------------WDFLRQLRQAGTTVLI 190

Query: 177 ---FLDIARNQPDRCHIVD-----SAHSFQSVATNI 204
              +L+      DR  I+D     +  +   +   +
Sbjct: 191 TSHYLEEVDALADRVAIIDQGVVIATGTPSQLKDQV 226


>gi|27452859|gb|AAO12363.1| thymidine kinase [Porcine lymphotropic herpesvirus 2]
          Length = 578

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 37/197 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCGVDEF 62
           FEG    GK+T I+ L++ ++     +    EP            +    +     V + 
Sbjct: 261 FEGAMAVGKSTMITHLQQVIEED--SIITFPEPMYYWTKVYNNVLKQIYKLNKYYRVGKE 318

Query: 63  GAEAEAI-------------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE- 108
            A AE +                  R  H ++   P     K ++ DR   S+       
Sbjct: 319 SASAELLACQVKFMTPLKTMWSYKQRCMHPDSPSAPVTPFDKWVIFDRHPLSATVVFPLI 378

Query: 109 ----RDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                  S + F+  L    +      D  +++ L +++  KR++ R+   E        
Sbjct: 379 LLKKGMLSFNDFMHLLNTFTAANG---DTIVLMSLDIEVNYKRLKRRFRKYEGFV----- 430

Query: 164 RKDVMIHEKRRQIFLDI 180
             D+   ++ +  F  +
Sbjct: 431 --DIAHLKEVKAAFHAL 445


>gi|54310388|ref|YP_131408.1| adenylylsulfate kinase [Photobacterium profundum SS9]
 gi|46914829|emb|CAG21606.1| putative adenylylsulfate kinase [Photobacterium profundum SS9]
          Length = 208

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G   + 
Sbjct: 39  FTGLSGAGKSTVAGALENRLVELGYHTY-----------------LLDGDNVRHGLCRDL 81

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              +  R +++     V +     G I+L 
Sbjct: 82  GFSSEDRRENIRRIGEVAKLMADAGLIVLS 111


>gi|23100609|ref|NP_694076.1| spermidine:putrescine ABC transporter ATP-binding protein
          [Oceanobacillus iheyensis HTE831]
 gi|81745219|sp|Q8ELR4|POTA_OCEIH RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|22778842|dbj|BAC15110.1| spermidine:putrescine ABC transporter ATP-binding protein
          [Oceanobacillus iheyensis HTE831]
          Length = 370

 Score = 37.3 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT + L+  F +  + D+  
Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFTEASSGDIIF 67


>gi|326431173|gb|EGD76743.1| dynein heavy chain isotype 1B [Salpingoeca sp. ATCC 50818]
          Length = 4432

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 27/120 (22%)

Query: 7    ISFEGIEGAGKTTHISLLK---RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
            +   G  G+GKT    +L      L       +V   P   P     R  LL     +  
Sbjct: 1985 VVIVGPSGSGKTMVWRVLHHAMSKLAANRIKTYVM-NPKAMP-----RQQLLGHIDPDTR 2038

Query: 64   AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               + ++ AAAR      V++  L +   ++CD                   +++SL  +
Sbjct: 2039 DWYDGVLTAAAR-----QVVKEPLDQHSWIVCD-------------GDIDPEWIESLNSV 2080


>gi|320201899|gb|EFW76474.1| Conserved ATP-binding protein YghS [Escherichia coli EC4100B]
          Length = 232

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|319945814|ref|ZP_08020064.1| adenylate kinase [Streptococcus australis ATCC 700641]
 gi|319747879|gb|EFW00123.1| adenylate kinase [Streptococcus australis ATCC 700641]
          Length = 214

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 82/235 (34%), Gaps = 64/235 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T  + +    Q  +               +  R  +      E G  A++ +
Sbjct: 9   GLPGAGKGTQAAKIVEQFQVAHI-----------STGDMFRAAM--ANQTEMGVLAKSFI 55

Query: 71  FAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-S 124
               + + V +     +++  L +  I               E+      F  ++++  +
Sbjct: 56  ---DKGELVPDDVTNGIVKERLAQDDI--------------KEKGFLLDGFPRTIEQAHA 98

Query: 125 VQEVMPDC------TIILDLPVDIGLKRVQNRYSLRESAC--------------LDYFER 164
           + +++ D        I +++     L+R+  R   RE+                 DY++R
Sbjct: 99  LDQILVDLGLELEGVINIEVDPSCLLERLSGRIIHRETGETYHKVFNPPADYKEEDYYQR 158

Query: 165 KDVMIHEKRRQIFLDIARNQP--------DRCHIVDSAHSFQSVATNILNIVWEL 211
           +D      +R++ ++IA+ +P           H ++       V  +I  ++  L
Sbjct: 159 EDDKPETVKRRLDVNIAQGEPILAHYRAKGLVHDIEGNQDINDVFKDIQKVLENL 213


>gi|300905888|ref|ZP_07123621.1| hypothetical protein HMPREF9536_03880 [Escherichia coli MS 84-1]
 gi|301304167|ref|ZP_07210283.1| hypothetical protein HMPREF9347_02767 [Escherichia coli MS 124-1]
 gi|300402357|gb|EFJ85895.1| hypothetical protein HMPREF9536_03880 [Escherichia coli MS 84-1]
 gi|300840580|gb|EFK68340.1| hypothetical protein HMPREF9347_02767 [Escherichia coli MS 124-1]
 gi|315256884|gb|EFU36852.1| hypothetical ATP-binding protein YghS [Escherichia coli MS 85-1]
          Length = 232

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|256271551|gb|EEU06594.1| Ura6p [Saccharomyces cerevisiae JAY291]
          Length = 204

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 44/214 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L +      L      +   +   G+   E  ++ +      +   +
Sbjct: 23  GGPGAGKGTQCEKLVKDYSFVHLSA-GDLLRAEQGRAGSQYGELIKNCIKEG---QIVPQ 78

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSS-YAYQGERDSSQHLFLDSLQEI 123
              +         + N I   +   K   L D F      A   ERD  +  F+      
Sbjct: 79  EITL-------ALLRNAISDNIKANKHKFLIDGFPRKMDQAISFERDIVESKFI------ 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFL 178
                     +  D P DI L+R+  R   S R    ++  +++     E      + F 
Sbjct: 126 ----------LFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFE 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                   +   V    S + V  ++ + + + +
Sbjct: 176 T-----KSKVVRVRCDRSVEDVYKDVQDAIRDRL 204


>gi|229179457|ref|ZP_04306810.1| Phosphoribulokinase/uridine kinase [Bacillus cereus 172560W]
 gi|228603958|gb|EEK61426.1| Phosphoribulokinase/uridine kinase [Bacillus cereus 172560W]
          Length = 219

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDE 61
           I   GI G   AGKTT  + L   L +   +   T       +++  +H ++      + 
Sbjct: 20  IVI-GISGHGAAGKTTFANRLVNLLNQNEANYINT--DPYIVSSDIRKHAVIHYTYQNEN 76

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +  A    A  L+ +E  I+  +  G     D +   ++ Y   +  S    +  ++
Sbjct: 77  HRYKMTACHPVAHHLEALERDIQ-MVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVE 130

Query: 122 EISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +S   + P   D  I      +  L R  +R      A + Y  +     HE+RR  + 
Sbjct: 131 GMSAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGADISYLRQS----HEERRIQYE 186

Query: 179 DIARNQPDRCHIV 191
               +   R  I+
Sbjct: 187 VFMHSYSQRFDII 199


>gi|227498715|ref|ZP_03928857.1| dephospho-CoA kinase [Acidaminococcus sp. D21]
 gi|226904169|gb|EEH90087.1| dephospho-CoA kinase [Acidaminococcus sp. D21]
          Length = 205

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 37/221 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------VTRE---PGGTPAAEAARHVL 54
           + I   G   +GK+T  +    +L +K   V           E   P     A+     +
Sbjct: 1   MIIGLTGGIASGKSTVSA----YLAQKGIPVFDADRSGWHVEEKGSPCLARLAKRFGEKI 56

Query: 55  LSCGVDEFGAEAEAIVFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           L            A+ F++      +  ++  A+ E +        D S           
Sbjct: 57  LMADGRLDRTRLAALAFSSKEATQDLNAIVHGAIKEERDAFLRLHKDDSLVV-----IDA 111

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            L L+   E    EV         +P +  ++R   R  +     L    R+  ++ ++ 
Sbjct: 112 PLLLEGHWESVCDEVW--LVF---IPEEEQVRRAMKRSGITRKEVLMRIRRQMPLVEKR- 165

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                 +A        I+D++ + +++   +   + + +++
Sbjct: 166 -----KMAD------VIIDNSQTLEALYEQVDQALMKALER 195


>gi|225872836|ref|YP_002754293.1| conjugative relaxase domain protein [Acidobacterium capsulatum ATCC
           51196]
 gi|225792403|gb|ACO32493.1| conjugative relaxase domain protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 905

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 12/63 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV-FA 72
           G+GKTT +S L+  ++ + Y++H     G  P + AAR +      +E G   + +  F 
Sbjct: 464 GSGKTTVLSALRETIEAQGYELH-----GLAPTSRAARQL------NEAGIRTQTLQGFL 512

Query: 73  AAR 75
           AAR
Sbjct: 513 AAR 515


>gi|222081648|ref|YP_002541013.1| sugar ABC transporter [Agrobacterium radiobacter K84]
 gi|221726327|gb|ACM29416.1| sugar ABC transporter [Agrobacterium radiobacter K84]
          Length = 372

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 9/103 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
           G F+   G  G GK+T + ++   L+            V    EP     A   +   L 
Sbjct: 46  GEFVVLVGPSGCGKSTLLRMIAG-LESISDGEIEIGDRVVNDLEPNERDIAMVFQSYALY 104

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI-LLCDRF 98
             +      A ++  A      +E  +  A     I  L DR+
Sbjct: 105 PHMTVRDNMAFSLKLARRSRQEIEQKVNDAASILDIAALLDRY 147


>gi|213511344|ref|NP_001133801.1| Bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase 2
           [Salmo salar]
 gi|209155378|gb|ACI33921.1| Bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase 2
           [Salmo salar]
          Length = 614

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  +   +  R           G       
Sbjct: 48  GLSGAGKTTVGFALEEYLVSHGI-------PCYSLDGDNIRQ----------GLNRNLGF 90

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            +  R +++  +   A +         F D+         S         ++I VQ  +P
Sbjct: 91  TSVDREENIRRIAEVAKL---------FADAGLVCITSFISPFTKDRQEAKKIHVQSGLP 141

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+++   R
Sbjct: 142 FFEVFIDAPLEVCESR 157


>gi|159122877|gb|EDP47997.1| ABC multidrug transporter, putative [Aspergillus fumigatus A1163]
          Length = 1274

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1047 IQSGQFVAFVGPSGCGKTTVISLLERF 1073


>gi|167746221|ref|ZP_02418348.1| hypothetical protein ANACAC_00926 [Anaerostipes caccae DSM 14662]
 gi|167654214|gb|EDR98343.1| hypothetical protein ANACAC_00926 [Anaerostipes caccae DSM 14662]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
          SG  I   G  G+GK+T I L+   L     ++    +P G  + E  
Sbjct: 34 SGRIIGLLGPNGSGKSTLIKLINGLLTATEGEILFDSQPLGIHSREHI 81


>gi|53714015|ref|YP_100007.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          fragilis YCH46]
 gi|52216880|dbj|BAD49473.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          fragilis YCH46]
          Length = 470

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 42 KKGEFVTILGPSGCGKTTLLRLIA 65


>gi|15425667|dbj|BAB64312.1| BphS [Pseudomonas sp. KKS102]
 gi|321116540|dbj|BAJ72239.1| GntR family transcriptional regulator [Acidovorax sp. KKS102]
          Length = 254

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 19/70 (27%), Gaps = 10/70 (14%)

Query: 144 LKRVQNRYSLRESACLDYFERKDVMIHEKRRQI--------FLDIARNQPDRCHIVDSAH 195
           L R Q R     +   D +E +++  H              F +I     +R   +    
Sbjct: 145 LTRAQERVEANPAEAFDAWEARNLEFHNALMAASPSKWLANFREILLRNSERYRRLSGTQ 204

Query: 196 S--FQSVATN 203
                 V   
Sbjct: 205 GPLPAEVHEE 214


>gi|46143444|ref|ZP_00135239.2| COG0563: Adenylate kinase and related kinases [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208764|ref|YP_001053989.1| adenylate kinase [Actinobacillus pleuropneumoniae L20]
 gi|165976718|ref|YP_001652311.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|303252072|ref|ZP_07338241.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|307246216|ref|ZP_07528297.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307248323|ref|ZP_07530348.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|307255197|ref|ZP_07537014.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307257364|ref|ZP_07539134.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|307259634|ref|ZP_07541358.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|166980291|sp|A3N1U8|KAD_ACTP2 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|226741845|sp|B0BQN2|KAD_ACTPJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|126097556|gb|ABN74384.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
 gi|165876819|gb|ABY69867.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|302649054|gb|EFL79241.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|306852825|gb|EFM85049.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306855193|gb|EFM87371.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|306861847|gb|EFM93824.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306864214|gb|EFM96127.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306866279|gb|EFM98143.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
          Length = 214

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 55/234 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +             T         +  R  +      E G +A
Sbjct: 3   IILLGAPGAGKGTQAQFMMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +A++        V + +  AL++ +I   D    + +   G   +      D+L++    
Sbjct: 50  KALM---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---S 99

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166
            V  D  +  D+  ++ ++R+  R                       +    D   R+D 
Sbjct: 100 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDD 159

Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                     + H++ +     +   A     R   +D     + V+  +  I+
Sbjct: 160 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 213


>gi|110633191|ref|YP_673399.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mesorhizobium sp. BNC1]
 gi|110284175|gb|ABG62234.1| adenylylsulfate kinase [Chelativorans sp. BNC1]
          Length = 640

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +LL++ L       +                 +L       G   + 
Sbjct: 473 FTGLSGSGKSTVANLLEKKLHAAGRHTY-----------------ILDGDNVRHGLNRDL 515

Query: 69  IVFAAARLD---HVENVIRPALMEGKILL 94
                 R++    V  V R     G I+L
Sbjct: 516 GFTEEDRVENIRRVAEVARLMADAGLIVL 544


>gi|331002914|ref|ZP_08326427.1| hypothetical protein HMPREF0491_01289 [Lachnospiraceae oral taxon
          107 str. F0167]
 gi|330413207|gb|EGG92581.1| hypothetical protein HMPREF0491_01289 [Lachnospiraceae oral taxon
          107 str. F0167]
          Length = 480

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          N G FI   G+ G GKT+ + LL
Sbjct: 28 NKGEFIVITGLSGCGKTSLLRLL 50


>gi|328885831|emb|CCA59070.1| putative phosphatase [Streptomyces venezuelae ATCC 10712]
          Length = 856

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 46/221 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GK+T      R  +           P    +++  R ++     D+  ++
Sbjct: 24  LVVLVGATGSGKSTFAR---RHFK-----------PTEIVSSDFCRGLVADDENDQSASK 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS- 124
                      D +  ++   L  G++ + D              + Q      L +++ 
Sbjct: 70  --------DAFDVLHYIVGKRLAAGRLAVVD------------ATNVQQEARRQLVQLAR 109

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
             +V+P   I+LDLP ++   R   R         D       +I   RR++   +   +
Sbjct: 110 SYDVLP-IAIVLDLPEEVCRSRNAAR--------PDRAGMPAHVIQRHRRELRRSLRGLE 160

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
            +    V    S + V  +   +V E     +  L+   DI
Sbjct: 161 REGFRKVHVLRSVEEV--DAAEVVLERRFNDLRHLTGPFDI 199


>gi|326470779|gb|EGD94788.1| multidrug resistance protein [Trichophyton tonsurans CBS 112818]
          Length = 1254

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRF 27
            G F++F G  G GK+T I+LL RF
Sbjct: 1051 GKFVAFVGPSGCGKSTMINLLCRF 1074


>gi|329942492|ref|ZP_08291302.1| cytidylate kinase [Chlamydophila psittaci Cal10]
 gi|313847725|emb|CBY16715.1| putative cytidylate kinase [Chlamydophila psittaci RD1]
 gi|325506650|gb|ADZ18288.1| cytidylate kinase [Chlamydophila psittaci 6BC]
 gi|328815402|gb|EGF85390.1| cytidylate kinase [Chlamydophila psittaci Cal10]
 gi|328914369|gb|AEB55202.1| Cytidylate kinase [Chlamydophila psittaci 6BC]
          Length = 216

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + L 
Sbjct: 1  MIITIDGPSGTGKSTIAKALAKDLN 25


>gi|300118297|ref|ZP_07056044.1| ABC transporter, ATP-binding protein [Bacillus cereus SJ1]
 gi|298724266|gb|EFI64961.1| ABC transporter, ATP-binding protein [Bacillus cereus SJ1]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|296133098|ref|YP_003640345.1| cytidylate kinase [Thermincola sp. JR]
 gi|296031676|gb|ADG82444.1| cytidylate kinase [Thermincola potens JR]
          Length = 226

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M     I+ +G  GAGK+T    +   L 
Sbjct: 1  MKDQKVIAIDGPAGAGKSTVAKKVAEKLN 29


>gi|269215629|ref|ZP_06159483.1| guanylate kinase [Slackia exigua ATCC 700122]
 gi|269131116|gb|EEZ62191.1| guanylate kinase [Slackia exigua ATCC 700122]
          Length = 193

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 6/98 (6%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M +G      G  GAGK T I LL + L+     V   TR P        +   +     
Sbjct: 1  MRTGNLFVLSGPSGAGKGTLIGLLLKRLEGAWLSVSATTRAPREGEVDGVSYLFVSDDRF 60

Query: 60 DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKIL 93
          DE  A+ + ++  A   DH      +++   +  G  +
Sbjct: 61 DEMVAQ-DRLLEWAQVHDHRYGTPRDLVERHIAAGDQV 97


>gi|288932752|ref|YP_003436812.1| adenylylsulfate kinase [Ferroglobus placidus DSM 10642]
 gi|288895000|gb|ADC66537.1| adenylylsulfate kinase [Ferroglobus placidus DSM 10642]
          Length = 174

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 6  FIS-FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          F+    G  GAGKTT    L++ L+     V
Sbjct: 3  FVVWLTGPSGAGKTTLARALEKRLKEMGLKV 33


>gi|257867685|ref|ZP_05647338.1| iron compound ABC transporter [Enterococcus casseliflavus EC30]
 gi|257874012|ref|ZP_05653665.1| iron compound ABC transporter [Enterococcus casseliflavus EC10]
 gi|257801768|gb|EEV30671.1| iron compound ABC transporter [Enterococcus casseliflavus EC30]
 gi|257808176|gb|EEV36998.1| iron compound ABC transporter [Enterococcus casseliflavus EC10]
          Length = 267

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          M  G  I   G  G+GK+T +  L R LQ  + +V +
Sbjct: 30 MPEGKIIGLIGPNGSGKSTFLKALARILQPLSGEVLL 66


>gi|255646624|gb|ACU23786.1| unknown [Glycine max]
          Length = 299

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 58/217 (26%)

Query: 15  AGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           +GKTT   +L   L    YD    V +E GG    +  +H            E E +   
Sbjct: 116 SGKTTVGRILSEALSYSFYDSDALVVKEVGGISVTDIFKHY---GEPFFRNKETEVL--- 169

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
                             K+ +  R L S+         +    +D   +   Q +    
Sbjct: 170 -----------------QKVSIMHRHLIST------GGGAVVRPIDW--KYMQQGIS--- 201

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV---------MIHEKRRQIF------ 177
            + LD+PV++  +R+    +  +S  L ++E  D           + E+R + +      
Sbjct: 202 -VWLDVPVEVLTQRITAEGT--DSRPLLHYEGGDAYTKTITHLSSLFEERSEAYANANVK 258

Query: 178 --LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
             L+    +  R  ++D   S  ++A   L  +   +
Sbjct: 259 VSLENMAAKLGRRDVLD--LSPTAIAMEALEQIKGFL 293


>gi|289578949|ref|YP_003477576.1| excinuclease ABC subunit A [Thermoanaerobacter italicus Ab9]
 gi|289528662|gb|ADD03014.1| excinuclease ABC, A subunit [Thermoanaerobacter italicus Ab9]
          Length = 927

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+FI   G+ G+GK+T I  +L + L +K Y      +PG     E   ++
Sbjct: 618 GVFICVTGVSGSGKSTLINEILYKALAQKIYKSK--DKPGNHDTIEGIENI 666


>gi|240948268|ref|ZP_04752654.1| adenylate kinase [Actinobacillus minor NM305]
 gi|257464525|ref|ZP_05628896.1| adenylate kinase [Actinobacillus minor 202]
 gi|240297307|gb|EER47848.1| adenylate kinase [Actinobacillus minor NM305]
 gi|257450185|gb|EEV24228.1| adenylate kinase [Actinobacillus minor 202]
          Length = 214

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 71/230 (30%), Gaps = 55/230 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    +             T         +  R  +      E G +A+A++
Sbjct: 7   GAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQAKALM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                   V + +  AL++ +I   D    + +   G   +      D+L++     V  
Sbjct: 54  ---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---SGVKI 103

Query: 131 DCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD----- 166
           D  +  D+  ++ ++R+  R                       +    D   R+D     
Sbjct: 104 DLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDDKPET 163

Query: 167 -----VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                 + H++ +     +   A     R   +D     + V+  +  I+
Sbjct: 164 VLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 213


>gi|268591937|ref|ZP_06126158.1| heme ABC exporter, ATP-binding protein CcmA [Providencia rettgeri
           DSM 1131]
 gi|291312326|gb|EFE52779.1| heme ABC exporter, ATP-binding protein CcmA [Providencia rettgeri
           DSM 1131]
          Length = 210

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 32/96 (33%), Gaps = 12/96 (12%)

Query: 6   FIS-------FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSC 57
           FI         EG  GAGKTT + ++   L+     V    +       E  RH+L L  
Sbjct: 22  FIVQPSEILQVEGPNGAGKTTLLRMMAGLLKPDEGAVCWNNQSIDKLKEEFTRHLLYLGH 81

Query: 58  GVDEFGAEA--EAIVFAAARL--DHVENVIRPALME 89
                      E + F       +H    I  AL E
Sbjct: 82  KPAVKSLLTPYENLKFYYQMHHKEHEGERIWSALEE 117


>gi|168003750|ref|XP_001754575.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694196|gb|EDQ80545.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 221

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 64/226 (28%), Gaps = 49/226 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
             G   +GK T   ++                       +  R  + +       A+   
Sbjct: 6   ISGAPASGKGTQCEMIVEQF-----------NLTHIATGDLLRAEVAAGTEAGMLAQE-- 52

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 +   V N I  A+++ K+   D       A  G         L   + +   ++
Sbjct: 53  ---YMQKGQLVPNEIVVAMVKNKL---D------IAPNGWLLDGYPRSLSQAEALEAFDI 100

Query: 129 MPDCTIILD--LPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHEK 172
            P   I+L+  +P +I ++RV  R     +  +                  ++D     K
Sbjct: 101 HPQIFILLEASVPEEILVQRVVGRRLDPVTGKIYHLMYSPPETPEIAARLTQRDDDTEAK 160

Query: 173 RRQIF-------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +            +     D   + D       V  +I N++ EL
Sbjct: 161 VKLRLKTHSSNVQSVLDTYKDVIKV-DGNRPKDQVFADIQNLIVEL 205


>gi|157162465|ref|YP_001459783.1| putative lipoprotein [Escherichia coli HS]
 gi|157068145|gb|ABV07400.1| putative lipoprotein [Escherichia coli HS]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|71910222|ref|YP_281772.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS5005]
 gi|71853004|gb|AAZ51027.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS5005]
          Length = 226

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52
              + I   G   +GK+T + ++    ++  Y       V    +  G    EA R    
Sbjct: 27  KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 82

Query: 53  --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +L + G  +    +E +      +         +I+  L   +             + 
Sbjct: 83  NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 130

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
            +  +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         + 
Sbjct: 131 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 188

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                      L I   +P    ++D++    ++   + + +  L   R
Sbjct: 189 -----------LPIEEKKPYASLVIDNSGDIAALIKQVQSALLLLANPR 226


>gi|60682211|ref|YP_212355.1| putative ABC transporter ATP-binding protein [Bacteroides
          fragilis NCTC 9343]
 gi|81314726|sp|Q5LBT4|POTA_BACFN RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|60493645|emb|CAH08434.1| putative ABC transport system, ATP-binding protein [Bacteroides
          fragilis NCTC 9343]
          Length = 461

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|310642071|ref|YP_003946829.1| permease protein of abc transporter system [Paenibacillus polymyxa
           SC2]
 gi|309247021|gb|ADO56588.1| Probable permease protein of ABC transporter system [Paenibacillus
           polymyxa SC2]
          Length = 616

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           ++  G  GAGKTT ++LL RF +    ++++     GTP ++  R 
Sbjct: 406 VAIVGPTGAGKTTLVNLLMRFYELNGGEIYI----DGTPISQLTRE 447


>gi|301163689|emb|CBW23243.1| putative ABC transport system, ATP-binding protein [Bacteroides
          fragilis 638R]
          Length = 461

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|296330373|ref|ZP_06872854.1| putative ABC efflux transporter (ATP-binding protein) [Bacillus
          subtilis subsp. spizizenii ATCC 6633]
 gi|305676022|ref|YP_003867694.1| putative ABC efflux transporter ATP-binding protein [Bacillus
          subtilis subsp. spizizenii str. W23]
 gi|296152641|gb|EFG93509.1| putative ABC efflux transporter (ATP-binding protein) [Bacillus
          subtilis subsp. spizizenii ATCC 6633]
 gi|305414266|gb|ADM39385.1| putative ABC efflux transporter (ATP-binding protein) [Bacillus
          subtilis subsp. spizizenii str. W23]
          Length = 300

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59
          M  G   +  G  GAGKTT IS++   L+    D+ +  R P      E    +L    V
Sbjct: 27 MKKGEIAAILGPNGAGKTTVISMILGLLKPSKGDIKLFNRVPDDQQVREKIGVMLQEVSV 86

Query: 60 DEFGAEAEAI 69
                +E +
Sbjct: 87 MPGLKVSEIL 96


>gi|288904733|ref|YP_003429954.1| deoxynucleoside kinase [Streptococcus gallolyticus UCN34]
 gi|306832910|ref|ZP_07466042.1| deoxyguanosine kinase [Streptococcus bovis ATCC 700338]
 gi|325977650|ref|YP_004287366.1| deoxyguanosine kinase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731458|emb|CBI13010.1| putative deoxynucleoside kinase [Streptococcus gallolyticus UCN34]
 gi|304424809|gb|EFM27943.1| deoxyguanosine kinase [Streptococcus bovis ATCC 700338]
 gi|325177578|emb|CBZ47622.1| deoxyguanosine kinase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 212

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 29/163 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GKTT+ SLL + L           EP            +L    ++     
Sbjct: 2   IILAGMIGVGKTTYTSLLAKEL---GTTAFF--EPVDNNP-------ILDKYYEDPEKYG 49

Query: 67  EAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQ----HL 115
            A+ ++   +       I+ A      +L DR  + D+ + Y    QG     +      
Sbjct: 50  FALQIYFLNKR---FKAIKKAYDTDNNVL-DRSIYEDALFTYINTLQGSISEQEYKIYLE 105

Query: 116 FLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRES 156
            LD++ E         PD  I L+   D  +  ++ R    E 
Sbjct: 106 LLDNMMEEIDGLPKKSPDLLIYLEGSFDHIMNNIKKRGRDFEQ 148


>gi|256838516|ref|ZP_05544026.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739435|gb|EEU52759.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 349

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 36/145 (24%)

Query: 1   MNSGLFISF---EGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVL 54
           M++  F++F   +G  G GK+T  +L   +L   +  N  V     P  +      R   
Sbjct: 97  MSNETFVAFATQKG--GIGKSTVTALAANYLHNVKGHNVAVIDCDAPQHSIHGLRERETA 154

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
           L  G         ++ F A   DH   + +                   AY      + +
Sbjct: 155 LIGG---------SLYFKALACDHFRKIRKN------------------AYPVIASDALN 187

Query: 115 LFLDSLQEISVQEVMPDCTIILDLP 139
              D+ + ++ +EV PD  +  D+P
Sbjct: 188 ALDDAERMLAAEEVKPD-VVFFDMP 211


>gi|255009681|ref|ZP_05281807.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          fragilis 3_1_12]
 gi|313147467|ref|ZP_07809660.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          fragilis 3_1_12]
 gi|313136234|gb|EFR53594.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          fragilis 3_1_12]
          Length = 461

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|253998858|ref|YP_003050921.1| hypothetical protein Msip34_1147 [Methylovorus sp. SIP3-4]
 gi|253985537|gb|ACT50394.1| protein of unknown function DUF344 [Methylovorus sp. SIP3-4]
          Length = 502

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 27/149 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG++ AGK   I  + + L  ++Y+V     P   P  E  +H  L           
Sbjct: 300 IVFEGVDAAGKGGSIRRITQALDARSYNVV----PIAAPTEEERQHPYLWRFWRHLPRRG 355

Query: 67  EAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +F   R  +   +   +     +              AY    D  +   +   + +
Sbjct: 356 RITIF--DRSWYGRVLVERVEGLCADADW---------QRAYAEINDFEEQ--IADHKTL 402

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            V+         L +  +  L R + R  
Sbjct: 403 VVK-------FWLQISPEEQLARFEAREK 424


>gi|271961803|ref|YP_003335999.1| daunorubicin resistance ABC transporter ATPase [Streptosporangium
           roseum DSM 43021]
 gi|270504978|gb|ACZ83256.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptosporangium roseum DSM 43021]
          Length = 312

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 64/206 (31%), Gaps = 28/206 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH-----VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGKTT + +L   +      V      + R P     A           VD+    
Sbjct: 38  GPNGAGKTTTVQILSTLIPADGGTVQVAGHDLVRRPDDVRGAIGVTG--QYSAVDKLLTG 95

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDSLQEI 123
            E ++  A          +    E    L DRF  +DS+    G         LD L   
Sbjct: 96  EENLLLMADLKHLPRRDGKRKAAE----LLDRFDLVDSARKPAGTYSGGMQRRLD-LAMT 150

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            V +      I LD     GL     R   +    L       V I    +  +L+ A  
Sbjct: 151 LVGDPR---LIFLD-EPTTGLDPRSRRSMWQIVREL---VASGVTIFLTTQ--YLEEADE 201

Query: 184 QPDRCHIVD-----SAHSFQSVATNI 204
             DR  ++D     +  + + +   I
Sbjct: 202 LADRIALLDHGRLIAEGTAEELKRRI 227


>gi|229140274|ref|ZP_04268831.1| hypothetical protein bcere0013_33740 [Bacillus cereus BDRD-ST26]
 gi|228643207|gb|EEK99481.1| hypothetical protein bcere0013_33740 [Bacillus cereus BDRD-ST26]
          Length = 195

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 25/139 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+R  + V     P   P  E  R + L     E     
Sbjct: 8   ISLQGPMASGKTTL----AKRLERCGFSVIY-ENP--YPIVEKRRVLNLDINSKEG---- 56

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +G +++ DR       +        GE    +    D
Sbjct: 57  ----FILNQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPKIIGEEWDIETALRD 112

Query: 119 SLQEISVQEVMPDCTIILD 137
            L ++  +E   D    LD
Sbjct: 113 ELYKL--RECRSDAIFYLD 129


>gi|254519643|ref|ZP_05131699.1| ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226913392|gb|EEH98593.1| ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 594

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
            SG  ++  G  GAGKTT I+LL RF + K   + +     G    +  R  L S
Sbjct: 375 KSGQMVAIVGPTGAGKTTLINLLMRFYEIKGGSIKI----DGVDIRDMKREDLRS 425


>gi|209877479|ref|XP_002140181.1| adenylate kinase protein [Cryptosporidium muris RN66]
 gi|209555787|gb|EEA05832.1| adenylate kinase protein, putative [Cryptosporidium muris RN66]
          Length = 223

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 76/242 (31%), Gaps = 68/242 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+GK T    L+R LQ                  +  R V+ S        + 
Sbjct: 11  IILIGAPGSGKGTQCEYLRRDLQ-----------LAHLSTGDMLREVVKSSSEIGLKVQE 59

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV- 125
                  AR + V++ I   L      + D+F DS    +G         +   +++S  
Sbjct: 60  -----IMARGELVDDEIVLQL------VSDKF-DSGACEEGFVLDGFPRTITQAEDLSRL 107

Query: 126 -----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------------- 159
                + +  +  I  ++  ++ ++RV  RY  + S  +                     
Sbjct: 108 LKSSGRSL--NYVIYFEISDELLIERVSGRYIHQGSGRVYHIKYNPPKVAGIDDITGEPL 165

Query: 160 -----DYFERKDV---MIHEKR---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                D  E   +     HE+     + +  +         I+ +  S   V + + +I+
Sbjct: 166 IQRKDDNIESLKIRLTAFHEQTTPLLEYYQKL-----GLLKIIKAGLSPSEVRSQLYSIL 220

Query: 209 WE 210
            +
Sbjct: 221 NK 222


>gi|193061947|ref|ZP_03043043.1| putative lipoprotein [Escherichia coli E22]
 gi|194426472|ref|ZP_03059027.1| putative lipoprotein [Escherichia coli B171]
 gi|260845745|ref|YP_003223523.1| hypothetical protein ECO103_3669 [Escherichia coli O103:H2 str.
           12009]
 gi|192932167|gb|EDV84765.1| putative lipoprotein [Escherichia coli E22]
 gi|194415780|gb|EDX32047.1| putative lipoprotein [Escherichia coli B171]
 gi|257760892|dbj|BAI32389.1| conserved hypothetical protein [Escherichia coli O103:H2 str.
           12009]
          Length = 232

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|182436911|ref|YP_001824630.1| putative ABC transporter ATP-binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178465427|dbj|BAG19947.1| putative ABC transporter ATP-binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 352

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 70/220 (31%), Gaps = 56/220 (25%)

Query: 11  GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDE 61
           G  GAGKTT + +L   L       +    DV   REP    +      ++  +  G   
Sbjct: 55  GPNGAGKTTAVRVLATLLRYDAGRAEVAGLDV--AREPRRVRSRIGLVGQYAAVDEG--- 109

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                   +F   RL H+ N  R     G+  L DRF  +  A +G ++ S       L 
Sbjct: 110 LTGRQNLEMF--GRLFHLGNR-RARQRAGE--LLDRFDLAEAADKGAKEYSGG-MRRRLD 163

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ------ 175
             S   + PD  + LD     GL         R              + E  R       
Sbjct: 164 LASSMILQPD-VLFLD-EPTTGL-------DPRGRG----------EVWEAVRALVAGGT 204

Query: 176 ------IFLDIARNQPDRCHIVD-----SAHSFQSVATNI 204
                  +LD A     R  ++D     +  +  ++   +
Sbjct: 205 TVLLTTQYLDEADKLASRVTVIDRGRAIADDTPDALKNRV 244


>gi|206976197|ref|ZP_03237106.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217961064|ref|YP_002339632.1| hypothetical protein BCAH187_A3689 [Bacillus cereus AH187]
 gi|222097116|ref|YP_002531173.1| ATP/gtp-binding site motif a protein [Bacillus cereus Q1]
 gi|206745651|gb|EDZ57049.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217064126|gb|ACJ78376.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|221241174|gb|ACM13884.1| ATP/GTP-binding site motif A protein [Bacillus cereus Q1]
          Length = 192

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 25/139 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+R  + V     P   P  E  R + L     E     
Sbjct: 5   ISLQGPMASGKTTL----AKRLERCGFSVIY-ENP--YPIVEKRRVLNLDINSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +G +++ DR       +        GE    +    D
Sbjct: 54  ----FILNQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPKIIGEEWDIETALRD 109

Query: 119 SLQEISVQEVMPDCTIILD 137
            L ++  +E   D    LD
Sbjct: 110 ELYKL--RECRSDAIFYLD 126


>gi|163791306|ref|ZP_02185720.1| hypothetical protein CAT7_08080 [Carnobacterium sp. AT7]
 gi|159873447|gb|EDP67537.1| hypothetical protein CAT7_08080 [Carnobacterium sp. AT7]
          Length = 601

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           I+  G  GAGKTT ++LL RF +  + ++++     GTP +   R  L
Sbjct: 390 IAIVGPTGAGKTTLVNLLMRFYEVNSGEIYI----DGTPISSVTREAL 433


>gi|145508814|ref|XP_001440351.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407568|emb|CAK72954.1| unnamed protein product [Paramecium tetraurelia]
          Length = 453

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 23/158 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            +G  +   G  G+G++T    L     R  +    TRE             L+S  V++
Sbjct: 245 RAGRILVI-GPPGSGRSTLAKHLC---SRYGFVYISTRE-------------LISNLVNK 287

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   +       + + V++ I  AL++ +I   D        Y  +        ++SL 
Sbjct: 288 KGTTGKEAFEKVNKGELVDDRIINALIKERINQTD---CQLQGYVLDGYPKTEQQMESLN 344

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           E++   + P   +I+D   D+ LKR+  R +   S  +
Sbjct: 345 ELN---IQPTLIVIIDAVDDVVLKRLTQRRTDPISGRI 379


>gi|123967721|ref|YP_001008579.1| adenylylsulfate kinase [Prochlorococcus marinus str. AS9601]
 gi|123197831|gb|ABM69472.1| Adenylylsulfate kinase [Prochlorococcus marinus str. AS9601]
          Length = 207

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + G+ I F G+ G+GK+T  + L   L    +  +V
Sbjct: 30 HKGMVIWFTGLSGSGKSTLANALNEVLHLDGFSTYV 65


>gi|75906933|ref|YP_321229.1| adenylate kinase [Anabaena variabilis ATCC 29413]
 gi|75700658|gb|ABA20334.1| Adenylate kinase [Anabaena variabilis ATCC 29413]
          Length = 184

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 66/207 (31%), Gaps = 37/207 (17%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T   +L   L   +     T         +  R  +         A++  
Sbjct: 6   FLGPPGAGKGTQAQILAEHL---HIPHIST--------GDILRQAMKEQTPLGIKAQSYV 54

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEISVQE 127
                     V++++   L +           S +   G      Q  FL+ L + + Q 
Sbjct: 55  DSGELVPDQLVQDLVEERLEQAD-------AKSGWILDGFPRKVTQAAFLEELLQKTGQG 107

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IARN 183
                 + LD P D+ + R+ +R    ++  +            +R +I+ +    +   
Sbjct: 108 GE--RVVNLDAPDDVVVTRLLSRGRKDDTEEVIR----------RRLEIYRNDTAPLIDY 155

Query: 184 QPDR--CHIVDSAHSFQSVATNILNIV 208
             DR     ++   S + V   +   +
Sbjct: 156 YSDRQKLLTINGDQSQEEVTHELKETL 182


>gi|62184815|ref|YP_219600.1| cytidylate kinase [Chlamydophila abortus S26/3]
 gi|81313006|sp|Q5L6U2|KCY_CHLAB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|62147882|emb|CAH63629.1| putative cytidylate kinase [Chlamydophila abortus S26/3]
          Length = 216

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L + L 
Sbjct: 1  MIITIDGPSGTGKSTIAKALAKDLN 25


>gi|163942117|ref|YP_001647001.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
 gi|163864314|gb|ABY45373.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
          Length = 272

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHV-LLSCG 58
           + +G  +S  G  G+GK+T + L+ R L++   D+ +  E   T  +A+ A+ + +L   
Sbjct: 24  IKAGEIVSLIGPNGSGKSTLLRLIARLLKQSEGDIILDGENIYTMKSADVAKQLAMLPQM 83

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
            D         +    R  H     R    + +I+
Sbjct: 84  HDHQLDLTVKELIEFGRGPHKSWSSRLNKEDEEIV 118


>gi|323936010|gb|EGB32305.1| yghS protein [Escherichia coli E1520]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGVPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|320533213|ref|ZP_08033928.1| adenylate kinase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320134577|gb|EFW26810.1| adenylate kinase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 195

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 37/210 (17%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK T  + +   L         T         +  R  +   G  E G +A+
Sbjct: 6   VLLGPPGAGKGTQAARIAERL---GIPAIST--------GDIFRANV--AGATELGTQAK 52

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCD-R--FLDSSYAYQGERDSSQHLFLDSLQEIS 124
           A +    + ++V + I  A++  +I   D R  FL   Y     +       L +   ++
Sbjct: 53  AYM---DKGEYVPDSITNAMVADRIAQADCRAGFLLDGYPRTTAQVGELDSMLKN-SSLA 108

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180
           +     D  + +    +  + R+  R    E    D  + + V+   +R +++ +    +
Sbjct: 109 L-----DVVVEITADAEAVVARLLKRAG--EQGRAD--DTEPVI--RRRLEVYAESTAPL 157

Query: 181 ARNQPDR--CHIVDSAHSFQSVATNILNIV 208
           A    +R     VD       V   I+  +
Sbjct: 158 ADIYDERGLLVQVDGMGEIDVVTDRIMEAL 187


>gi|312892176|ref|ZP_07751673.1| shikimate kinase [Mucilaginibacter paludis DSM 18603]
 gi|311295306|gb|EFQ72478.1| shikimate kinase [Mucilaginibacter paludis DSM 18603]
          Length = 188

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 18/80 (22%)

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH- 170
                ++  +  +      D  + L +P ++ ++R++ R           FER   +I+ 
Sbjct: 68  LGGSIVNWDESWNTLF---DLVVFLLIPAEVRMERLKKRE----------FERYGEVIYT 114

Query: 171 ----EKRRQIFLDIARNQPD 186
                 + + FL  A    D
Sbjct: 115 DPEGRNQYEAFLSWASGYDD 134


>gi|309703421|emb|CBJ02760.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|288553886|ref|YP_003425821.1| ABC transporter-like protein [Bacillus pseudofirmus OF4]
 gi|288545046|gb|ADC48929.1| ABC transporter related protein [Bacillus pseudofirmus OF4]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G    F G  G+GKTT I ++   L+  N  VH++       A EA + +       +
Sbjct: 29  KKGELFCFLGPNGSGKTTTIKMMTGLLEPTNGTVHISGVNMWKEALEAKKQIAYVPDQPK 88

Query: 62  FGAE---AEAIVFAA 73
              +   +E + F A
Sbjct: 89  LYPKLTGSEFLQFTA 103


>gi|270290376|ref|ZP_06196601.1| guanylate kinase [Pediococcus acidilactici 7_4]
 gi|304384746|ref|ZP_07367092.1| guanylate kinase [Pediococcus acidilactici DSM 20284]
 gi|270281157|gb|EFA26990.1| guanylate kinase [Pediococcus acidilactici 7_4]
 gi|304328940|gb|EFL96160.1| guanylate kinase [Pediococcus acidilactici DSM 20284]
          Length = 204

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 31/172 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I   G  G GK T    +     +   D     +   +      R   ++     
Sbjct: 3   KRGMLIVLSGPSGVGKGTVRKAI---FDQGGND----FQYSVSMTTRKPREGEVNGEDYY 55

Query: 62  FGAEAEAIVFAAARLDHVENVIRP--ALMEGKILLCDRFLDSSYAY-----QGERDSSQH 114
           F ++AE            E  I     L   K +  D +  +   Y        RD    
Sbjct: 56  FVSKAEF-----------EKNIEEGQMLEYAKYV--DNYYGTPLKYVNQTLDSGRDVFLE 102

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFER 164
           + ++  ++  V+E MPD   +   P D     +R+ NR +          E+
Sbjct: 103 IEVNGARQ--VREKMPDGVFLFLTPPDLMELKQRIINRGTEDIETINKRMEK 152


>gi|297545161|ref|YP_003677463.1| excinuclease ABC, A subunit [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842936|gb|ADH61452.1| excinuclease ABC, A subunit [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 927

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+FI   G+ G+GK+T I  +L + L +K Y      +PG     E   ++
Sbjct: 618 GVFICVTGVSGSGKSTLINEILYKALAQKIYKSK--DKPGNHDTIEGIENI 666


>gi|229017074|ref|ZP_04173992.1| ABC transporter ATP-binding protein [Bacillus cereus AH1273]
 gi|228744197|gb|EEL94281.1| ABC transporter ATP-binding protein [Bacillus cereus AH1273]
          Length = 72

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKKGEFTTLLGPSGCGKTTLLRMIA 49


>gi|218661793|ref|ZP_03517723.1| KAP P-loop domain-containing protein [Rhizobium etli IE4771]
          Length = 488

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          G+ I  EG  G+GK+T ++LL++ L   N
Sbjct: 39 GMVIGIEGPWGSGKSTMLNLLRKELPALN 67


>gi|189463007|ref|ZP_03011792.1| hypothetical protein BACCOP_03709 [Bacteroides coprocola DSM
          17136]
 gi|189430289|gb|EDU99273.1| hypothetical protein BACCOP_03709 [Bacteroides coprocola DSM
          17136]
          Length = 187

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 4  GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
          G  I F    G+GK+T I+ LL + L         +R P GT         L      + 
Sbjct: 2  GKLIIFSAPSGSGKSTIINYLLTQNLNLAFSISATSRPPRGTEQNGVEYFFLTPEEFKQR 61

Query: 63 GAEAEAIVF---AAARLD-HVENVIRPALMEGKILLCD 96
           A  E + +      R    ++  +   L  G+ ++ D
Sbjct: 62 IANNEFLEYEEVYTDRFYGTLKAQVEKQLEAGQNVIFD 99


>gi|118085483|ref|XP_001232001.1| PREDICTED: similar to Guk1 protein isoform 1 [Gallus gallus]
          Length = 198

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 43/224 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M     +   G  GAGK+T I  L K +     + V H TR+P          H +    
Sbjct: 1   MQGPRPVVLSGPSGAGKSTLIKKLFKDYENIFGFSVSHTTRQPRPGEVNGKDYHFVTREE 60

Query: 59  VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           + +     E I    F+       +  ++    + +I + D                  +
Sbjct: 61  MKKEIDAGEFIEHAEFSGNMYGTSKGAVQAVQAKNQICILD------------------I 102

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            +  ++ I   ++ P   I + +     D+  KR+++R +  E +         V     
Sbjct: 103 DIQGVKNIKKTDLNP---IYISVQPPSIDVLEKRLRDRQTETEESLQKRLTAARVD---- 155

Query: 173 RRQIFLDIARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQK 214
                L++++ +P      I++     +   + +   + + +QK
Sbjct: 156 -----LELSK-EPGLFDLVIIN--DDLEKAYSELKEQLLKEIQK 191


>gi|87300894|ref|ZP_01083736.1| Adenylate kinase [Synechococcus sp. WH 5701]
 gi|87284765|gb|EAQ76717.1| Adenylate kinase [Synechococcus sp. WH 5701]
          Length = 185

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 43/211 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T   LL              R        E  R  + +    E G EA+A
Sbjct: 7   FLGPPGAGKGTQAQLLAAE-----------RGLLHLSTGELLRAEVQAG--TELGTEAQA 53

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           ++   AR + V + +  A+++ ++L  D  +L   +     +  +    LD L++     
Sbjct: 54  VM---ARGELVSDALVLAIVKARLLSHDGGWLLDGFPRNLAQAGALRELLDELKQPIEH- 109

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFE--RKD----VMIHEKRRQIFLD 179
                 ++L L   I L+R+ +R    ++  +  +  E  R+     +  + +     L 
Sbjct: 110 -----VVLLQLDDGILLQRLLSRGRDDDNEAVIRNRLEVYREQTAPLIAFYRQ-----LG 159

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
           + R        V++  + ++VA+ +  +V +
Sbjct: 160 LIRE-------VEAEGAVEAVASRVSAVVSQ 183


>gi|70982708|ref|XP_746882.1| ABC multidrug transporter [Aspergillus fumigatus Af293]
 gi|66844506|gb|EAL84844.1| ABC multidrug transporter, putative [Aspergillus fumigatus Af293]
          Length = 1274

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1047 IQSGQFVAFVGPSGCGKTTVISLLERF 1073


>gi|323492295|ref|ZP_08097451.1| adenylylsulfate kinase [Vibrio brasiliensis LMG 20546]
 gi|323313459|gb|EGA66567.1| adenylylsulfate kinase [Vibrio brasiliensis LMG 20546]
          Length = 205

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALETRLAESGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|319786083|ref|YP_004145558.1| sulfate adenylyltransferase, large subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464595|gb|ADV26327.1| sulfate adenylyltransferase, large subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 655

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 492 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------VLDGDNVRHGLNRDL 534

Query: 69  IVFAAARLDHVENVIRPAL---MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++  V   A      G I+L      S +  +      +    + ++    
Sbjct: 535 GFTDEDRVENIRRVAEVAKLMTDAGLIVLV--SFISPFRAERRMARERFAPGEFVE---- 588

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+++   R
Sbjct: 589 --------VFVDVPLEVAEAR 601


>gi|315425555|dbj|BAJ47216.1| signal recognition particle subunit SRP54 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 466

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 15/122 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI+G GKTT  + L  +L+   Y V V       PAA      LL         E E   
Sbjct: 132 GIQGTGKTTTAAKLANYLKVGGYKVGVVCADTYRPAAYQQLKHLLEPRQIPVYGEPE--- 188

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                ++     +      G  +++ D            R   Q   +D ++ +  +E+ 
Sbjct: 189 -NNNPVEIARKGLEHFKQMGVDVVIID---------TAGRHRQQESLMDEMKMLE-KELK 237

Query: 130 PD 131
           PD
Sbjct: 238 PD 239


>gi|284162639|ref|YP_003401262.1| twitching mobility protein PilT [Archaeoglobus profundus DSM 5631]
 gi|284012636|gb|ADB58589.1| PilT protein domain protein [Archaeoglobus profundus DSM 5631]
          Length = 592

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T  + +  +L    + V     P      +       +    +
Sbjct: 259 QRGILIA--GPPGAGKSTFAASVANYLMEMGHIVKTMESPRDLIVRDEITQY--APLEGD 314

Query: 62  FGAEAEAIVF 71
               ++ ++ 
Sbjct: 315 MSLTSDILLL 324


>gi|256545743|ref|ZP_05473099.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Anaerococcus vaginalis ATCC 51170]
 gi|256398439|gb|EEU12060.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Anaerococcus vaginalis ATCC 51170]
          Length = 370

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT ++L+  FL   + ++++
Sbjct: 34 KGKFYTLLGPSGCGKTTILNLIAGFLDANSGEIYI 68


>gi|239631213|ref|ZP_04674244.1| excinuclease ABC subunit A [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239525678|gb|EEQ64679.1| excinuclease ABC subunit A [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 674

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI   G+ G+GK+T ++ +L+R L +K
Sbjct: 343 GKFIVVSGVSGSGKSTLVNSILRRALAQK 371


>gi|191637849|ref|YP_001987015.1| Excinuclease ABC, subunit A [Lactobacillus casei BL23]
 gi|190712151|emb|CAQ66157.1| Excinuclease ABC, subunit A [Lactobacillus casei BL23]
 gi|327381917|gb|AEA53393.1| Excision endonuclease subunit UvrA [Lactobacillus casei LC2W]
 gi|327385078|gb|AEA56552.1| Excision endonuclease subunit UvrA [Lactobacillus casei BD-II]
          Length = 963

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI   G+ G+GK+T ++ +L+R L +K
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQK 660


>gi|152970589|ref|YP_001335698.1| putative ABC transporter, ATP-binding protein [Klebsiella
          pneumoniae subsp. pneumoniae MGH 78578]
 gi|330015326|ref|ZP_08308143.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
 gi|150955438|gb|ABR77468.1| putative ABC transporter, ATP-binding protein [Klebsiella
          pneumoniae subsp. pneumoniae MGH 78578]
 gi|328531811|gb|EGF58636.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
          Length = 276

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI+  G  G GK+T + ++ 
Sbjct: 47 INQGEFITLLGPSGCGKSTLLKMVA 71


>gi|52080163|ref|YP_078954.1| adenylylsulfate kinase [Bacillus licheniformis ATCC 14580]
 gi|52785540|ref|YP_091369.1| hypothetical protein BLi01781 [Bacillus licheniformis ATCC 14580]
 gi|319646057|ref|ZP_08000287.1| adenylyl-sulfate kinase [Bacillus sp. BT1B_CT2]
 gi|81385610|sp|Q65JT8|CYSC_BACLD RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|52003374|gb|AAU23316.1| adenylylsulfate kinase [Bacillus licheniformis ATCC 14580]
 gi|52348042|gb|AAU40676.1| CysC [Bacillus licheniformis ATCC 14580]
 gi|317391807|gb|EFV72604.1| adenylyl-sulfate kinase [Bacillus sp. BT1B_CT2]
          Length = 197

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                  +L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFAQGYQVT-----------------VLDGDNVRHGLNKDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
               R +++     V +  + +G I++ 
Sbjct: 76  SDEDRKENIRRIGEVAKLFVEQGTIVIT 103


>gi|71999331|ref|NP_001023527.1| hypothetical protein Y57G11C.43 [Caenorhabditis elegans]
 gi|33300521|emb|CAE18026.1| C. elegans protein Y57G11C.43, confirmed by transcript evidence
          [Caenorhabditis elegans]
          Length = 302

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
          +GK+T +  L +  + K  D  + R+                    EF  + + +     
Sbjct: 12 SGKSTVVDRLAKKFEEKGKDYLIIRDEDYGGF---------DRKNYEFSNKEKDL----- 57

Query: 75 RLDHVENVIRPALMEGKILLCD 96
          R   + + ++  L + K+++CD
Sbjct: 58 RSW-IRSQVQQNLTKNKVIICD 78


>gi|16945728|dbj|BAB72059.1| AcrV [Streptomyces galilaeus]
          Length = 345

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 59/200 (29%), Gaps = 31/200 (15%)

Query: 11  GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT I +L   L       +   +DV    E   +  +   +   +   +    
Sbjct: 60  GPNGAGKTTTIRMLATLLTPDGGTARVLGHDVVREAEAVRSRVSLTGQFASIDEDLTATE 119

Query: 64  AEAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                  +   +R   VE      L            D + A   +  +        L  
Sbjct: 120 NLTLLARLLGFSRSQAVERS-EELLAA---------FDLTKAAGRQSKTFSGGMRRRLDI 169

Query: 123 ISVQEVMPDCTIILDLPVDIGLK---RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +   + PD  + LD     GL    R Q   S+R    L         I    +  +LD
Sbjct: 170 AASLVITPDL-LFLD-EPTTGLDPRTRGQVWDSVRAMVAL------GTTILLTTQ--YLD 219

Query: 180 IARNQPDRCHIVDSAHSFQS 199
            A    DR  ++D       
Sbjct: 220 EADQLADRIAVIDHGRVIAE 239


>gi|16130885|ref|NP_417459.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89109760|ref|AP_003540.1| hypothetical protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K-12 substr. W3110]
 gi|170082533|ref|YP_001731853.1| nucleoside triphosphate hydrolase domain-containing protein
           [Escherichia coli str. K-12 substr. DH10B]
 gi|194436747|ref|ZP_03068847.1| putative lipoprotein [Escherichia coli 101-1]
 gi|238902103|ref|YP_002927899.1| hypothetical protein BWG_2703 [Escherichia coli BW2952]
 gi|254162939|ref|YP_003046047.1| hypothetical protein ECB_02861 [Escherichia coli B str. REL606]
 gi|297517096|ref|ZP_06935482.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli OP50]
 gi|307139675|ref|ZP_07499031.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli H736]
 gi|331643686|ref|ZP_08344817.1| hypothetical ATP-binding protein YghS [Escherichia coli H736]
 gi|2833409|sp|Q46843|YGHS_ECOLI RecName: Full=Uncharacterized ATP-binding protein yghS
 gi|882514|gb|AAA69152.1| ORF_f237; GTG start [Escherichia coli str. K-12 substr. MG1655]
 gi|1789358|gb|AAC76021.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675793|dbj|BAE77046.1| hypothetical protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K12 substr. W3110]
 gi|169890368|gb|ACB04075.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli str. K-12 substr. DH10B]
 gi|194424229|gb|EDX40216.1| putative lipoprotein [Escherichia coli 101-1]
 gi|238863054|gb|ACR65052.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BW2952]
 gi|242378541|emb|CAQ33327.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BL21(DE3)]
 gi|253974840|gb|ACT40511.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli B str. REL606]
 gi|253978995|gb|ACT44665.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli BL21(DE3)]
 gi|284923012|emb|CBG36104.1| conserved hypothetical protein [Escherichia coli 042]
 gi|315137582|dbj|BAJ44741.1| predicted protein with nucleoside triphosphate hydrolase domain
           [Escherichia coli DH1]
 gi|323941913|gb|EGB38092.1| gyghS [Escherichia coli E482]
 gi|323960964|gb|EGB56583.1| gyghS [Escherichia coli H489]
 gi|331037157|gb|EGI09381.1| hypothetical ATP-binding protein YghS [Escherichia coli H736]
          Length = 237

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|116494464|ref|YP_806198.1| excinuclease ATPase subunit [Lactobacillus casei ATCC 334]
 gi|116104614|gb|ABJ69756.1| Excinuclease ABC subunit A [Lactobacillus casei ATCC 334]
          Length = 963

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI   G+ G+GK+T ++ +L+R L +K
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQK 660


>gi|124267900|ref|YP_001021904.1| guanylate kinase [Methylibium petroleiphilum PM1]
 gi|124260675|gb|ABM95669.1| guanylate kinase [Methylibium petroleiphilum PM1]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 47/191 (24%)

Query: 14  GAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--- 69
           GAGK++ +  L          + H TR P G        H +      +   E       
Sbjct: 15  GAGKSSLVKALLELDSHLAVSISHTTRPPRGQEVEGREYHFIEEPTFRDMVMEGAFFEWA 74

Query: 70  -----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                ++  +R+      I   L +G+ ++                    L +D    + 
Sbjct: 75  EVHGNLYGTSRIA-----IEQRLQDGEDVV--------------------LEIDWQGALQ 109

Query: 125 VQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++ + P+  +I  LP   D  L+R+Q R            E    +I  +     L++A+
Sbjct: 110 IKRLFPNAVLIFILPPSWDELLQRLQRRG-----------EDPPPVIETRMANARLEVAQ 158

Query: 183 NQPDRCHIVDS 193
            +     ++++
Sbjct: 159 AKHFDYVVINA 169


>gi|322378723|ref|ZP_08053153.1| shikimate kinase [Helicobacter suis HS1]
 gi|322380006|ref|ZP_08054271.1| shikimate kinase [Helicobacter suis HS5]
 gi|321147558|gb|EFX42193.1| shikimate kinase [Helicobacter suis HS5]
 gi|321148841|gb|EFX43311.1| shikimate kinase [Helicobacter suis HS1]
          Length = 164

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 38/115 (33%), Gaps = 22/115 (19%)

Query: 107 GERDSSQHLFLDSLQE------ISVQEVMPDCT-------IILDLPVDIGLKRVQNRYSL 153
           G     +   +  + +      I+    +P  T       I L L   +   R+ N  + 
Sbjct: 59  GYFRKLEKELVSQISQLQTPLVIATGGGLPIFTPIEVGVLIYLCLDFKVLYTRLINDSTP 118

Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           R        E+   +  ++    +  +A       H +++  S + V  +IL  +
Sbjct: 119 RPLFKTT--EQLHALYQKRC-SRYDSMAH------HRINANQSPERVIADILKRL 164


>gi|301065975|ref|YP_003787998.1| excinuclease ATPase subunit [Lactobacillus casei str. Zhang]
 gi|300438381|gb|ADK18147.1| Excinuclease ATPase subunit [Lactobacillus casei str. Zhang]
          Length = 963

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI   G+ G+GK+T ++ +L+R L +K
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQK 660


>gi|291295245|ref|YP_003506643.1| adenylylsulfate kinase [Meiothermus ruber DSM 1279]
 gi|290470204|gb|ADD27623.1| adenylylsulfate kinase [Meiothermus ruber DSM 1279]
          Length = 210

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          ++ G+ I F G+ GAGKTT    L+  L    Y V
Sbjct: 32 LSPGVVIWFTGLSGAGKTTLARALEVLLYEAGYPV 66


>gi|288935105|ref|YP_003439164.1| ABC transporter [Klebsiella variicola At-22]
 gi|288889814|gb|ADC58132.1| ABC transporter related protein [Klebsiella variicola At-22]
          Length = 276

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI+  G  G GK+T + ++ 
Sbjct: 47 INQGEFITLLGPSGCGKSTLLKMVA 71


>gi|227535568|ref|ZP_03965617.1| excinuclease ABC, subunit A [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227186815|gb|EEI66882.1| excinuclease ABC, subunit A [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 963

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI   G+ G+GK+T ++ +L+R L +K
Sbjct: 632 GKFIVVSGVSGSGKSTLVNSILRRALAQK 660


>gi|218709120|ref|YP_002416741.1| iron-siderophore uptake ABC transporter ATP-binding protein
          [Vibrio splendidus LGP32]
 gi|218322139|emb|CAV18253.1| ABC transporter: ATP-binding protein ; Iron-siderophore uptake
          [Vibrio splendidus LGP32]
          Length = 270

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV 53
          G F    G  G GK+T +  L R L+  K       +     PA E AR +
Sbjct: 40 GKFTVIVGPNGCGKSTLLRSLCRLLKPSKGQIYLDGQNIQKVPAKELAREL 90


>gi|198283628|ref|YP_002219949.1| IstB domain-containing protein ATP-binding protein
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198284129|ref|YP_002220450.1| IstB domain-containing protein ATP-binding protein
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198284483|ref|YP_002220804.1| IstB domain-containing protein ATP-binding protein
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198284852|ref|YP_002221173.1| IstB domain-containing protein ATP-binding protein
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667625|ref|YP_002427536.1| ISAfe9, transposition helper protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248149|gb|ACH83742.1| IstB domain protein ATP-binding protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198248650|gb|ACH84243.1| IstB domain protein ATP-binding protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198249004|gb|ACH84597.1| IstB domain protein ATP-binding protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198249373|gb|ACH84966.1| IstB domain protein ATP-binding protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218519838|gb|ACK80424.1| ISAfe9, transposition helper protein [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 275

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GK+  ++ +   L  +   V+ TR        ++AR  L            + ++
Sbjct: 110 GPPGVGKSHLVAAVGHALVERGCRVYFTRTSDLVQQLQSARKELRLPATLAKLDRFDLLI 169

Query: 71  ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
              F+  R D  E  +   L      + +R+   S A
Sbjct: 170 LDDFSYVRRDQAETSVLFEL------ISERYERKSLA 200


>gi|118619196|ref|YP_907528.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium ulcerans Agy99]
 gi|118571306|gb|ABL06057.1| bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit
           1) + adenylylsulfate kinase [Mycobacterium ulcerans
           Agy99]
          Length = 616

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 19/86 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK++   L++R L  +    +                 +L       G  A+   
Sbjct: 452 GLSGAGKSSVAMLVERKLLEEGVAAY-----------------VLDGDNLRHGLNADLGF 494

Query: 71  FAAARLDHVENVIRPA--LMEGKILL 94
             A R +++  +   A  L +   ++
Sbjct: 495 SMADRAENLRRLAHVAVLLADCGHVV 520


>gi|160872071|ref|ZP_02062203.1| signal recognition particle protein [Rickettsiella grylli]
 gi|159120870|gb|EDP46208.1| signal recognition particle protein [Rickettsiella grylli]
          Length = 451

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 25/127 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           + I+  G++G+GKTT ++ L  +L+ +KN  V +T      PAA      L       F 
Sbjct: 103 MMIA--GLQGSGKTTTVAKLAAWLKTQKNKSVLLTSTDIHRPAAILQLENLAENSNVLFH 160

Query: 64  A----EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD 118
                +    +        V+  I+ A  +G  +++ D            R       ++
Sbjct: 161 PSCASQTPTFI--------VQTAIQTARNKGVDVVIID---------TAGRLHIDDRMME 203

Query: 119 SLQEISV 125
            L+ I  
Sbjct: 204 ELRTIHT 210


>gi|21586577|gb|AAM54264.1| nitrogenase iron protein [uncultured prokaryote]
          Length = 144

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 24/141 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+T  S +   L  +   V +    G  P  +  R+  L  G               
Sbjct: 2   GIGKSTIASNIAAALAEQGLKVMMI---GCDPKTDCTRN--LHGGKKIKALLDYLRELGM 56

Query: 74  ARLDHVENV------IRPALMEGKILLCDRFLDSSYAYQG--------ERDSSQHLFLDS 119
           A L+  E V      IR  L     ++ + +  S     G               + ++ 
Sbjct: 57  AELELTEIVTGKQVSIRDLLENN--VIVEGYRGSICIEIGGPEPGIGCAGRGI-IVGIEI 113

Query: 120 LQEISVQE-VMPDCTIILDLP 139
           LQ++ V     PD  I  D+P
Sbjct: 114 LQKVGVFGYFKPDVVI-FDVP 133


>gi|78778554|ref|YP_396666.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9312]
 gi|78712053|gb|ABB49230.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9312]
          Length = 211

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + G+ I F G+ G+GK+T  + L   L    +  +V
Sbjct: 34 HKGMVIWFTGLSGSGKSTLANALNEVLHLDGFSTYV 69


>gi|326928608|ref|XP_003210468.1| PREDICTED: deoxycytidine kinase-like [Meleagris gallopavo]
          Length = 247

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 75/241 (31%), Gaps = 55/241 (22%)

Query: 15  AGKTTHISLLKRFLQRKNYDV----------HVTREPGGTPAAEAARH--VLLSCGVDEF 62
           AGK+T + LL++      ++V            T E      + + +    +L    D+ 
Sbjct: 17  AGKSTLVRLLEKH--SDEWEVIPEPIAKWCNIQTSEDECEELSTSQKSGGNILQMLYDKP 74

Query: 63  GAEAEAIVFAAA----RLDHVENVIRPALMEGKI--------LLCDRFLDSSYAYQGERD 110
              A      A     R       I   L E +         +  DR++ +S  ++    
Sbjct: 75  TRWAYTFQTYACLSRVRAQL--KPISAKLHEAEHPVQFFERSVYSDRYVFASNLFESGNI 132

Query: 111 SSQHLFLDS------LQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CL 159
           +     +        L +      +  +     I L       ++R+Q R    E    L
Sbjct: 133 NETEWAIYQDWHTWLLNQFQSEVELDGM-----IYLRTTPQKCMERLQKRGRKEEEGIDL 187

Query: 160 DYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF--QSVATN-ILNIVWEL 211
           +Y E      +  +     R  F ++ +  P    ++D    F    +    +++ +   
Sbjct: 188 EYLENLHYKHETWLYERSMRVDFENL-KEMP--ILVLDVNEDFKNDKIKQEYLIDEIKSF 244

Query: 212 V 212
           +
Sbjct: 245 L 245


>gi|307261775|ref|ZP_07543441.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306868593|gb|EFN00404.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
          Length = 214

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 55/234 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +             T         +  R  +      E G +A
Sbjct: 3   IILLGAPGAGKGTQAQFMMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +A++        V + +  AL++ +I   D    + +   G   +      D+L++    
Sbjct: 50  KALM---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---S 99

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166
            V  D  +  D+  ++ ++R+  R                       +    D   R+D 
Sbjct: 100 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKEEGKDDVTGEDLIIRQDD 159

Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                     + H++ +     +   A     R   +D     + V+  +  I+
Sbjct: 160 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 213


>gi|291546209|emb|CBL19317.1| guanylate kinase [Ruminococcus sp. SR1/5]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 56/166 (33%), Gaps = 30/166 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-GGTPAAEAARHVLLSCG 58
           M+ G+ +   G  G+GK T +  L          V   TR P  G    EA      +  
Sbjct: 1   MSKGILVVVSGFSGSGKGTVMKRLMEKYDNYALSVSVTTRNPRPGEKDGEAY--FFRTKE 58

Query: 59  VDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             E     + ++  A  +++        +   L  GK ++ +         QG       
Sbjct: 59  EFEQLIREDGLIEYAQYVENYYGTPRKYVEEQLSAGKDVILE------IEIQGAMK---- 108

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                     ++E  PD  ++   P    ++ ++NR   R +  LD
Sbjct: 109 ----------IREKFPDTLLVFVCPP--SMEELKNRLVGRGTETLD 142


>gi|261207845|ref|ZP_05922530.1| ABC transporter ATP-binding protein [Enterococcus faecium TC 6]
 gi|289566396|ref|ZP_06446824.1| lantibiotic ABC transporter ATP-binding protein [Enterococcus
           faecium D344SRF]
 gi|260078228|gb|EEW65934.1| ABC transporter ATP-binding protein [Enterococcus faecium TC 6]
 gi|289161834|gb|EFD09706.1| lantibiotic ABC transporter ATP-binding protein [Enterococcus
           faecium D344SRF]
          Length = 234

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T + LL   L+    +V    +P           ++ S  +       E ++
Sbjct: 37  GPNGAGKSTTMKLLCGLLKPSEGEVIFKGKPWSRDTLNKIGVLIESPAIYGNLTAKENML 96

Query: 71  FAAARLDHVENVIRPALM 88
             A  L   EN I   L 
Sbjct: 97  IHACMLGVSENEITRVLK 114


>gi|257462560|ref|ZP_05626971.1| guanylate kinase [Fusobacterium sp. D12]
 gi|317060213|ref|ZP_07924698.1| guanylate kinase [Fusobacterium sp. D12]
 gi|313685889|gb|EFS22724.1| guanylate kinase [Fusobacterium sp. D12]
          Length = 187

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 69/215 (32%), Gaps = 38/215 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G      G  GAGK+T    +++ L         TREP          + L     +
Sbjct: 1   MPKGNLYIVSGPSGAGKSTICRKVRKILGINLATSATTREPRVGEVHGVDYYFLSHAEFE 60

Query: 61  EFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +   E   + +A    ++   +++ +   + +G+ ++             E D    L +
Sbjct: 61  KKIQEGAFLEYAKVHNNYYGTLKSEVESRVNQGEKVIL------------EIDVQGGLQV 108

Query: 118 DSLQEISVQEVMPDC-TIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +L         PD   I    P ++    R++ R +  E             I E    
Sbjct: 109 KALY--------PDAHLIFFKTPNLEQLEARLRGRKTDSEETIQLRL---KNSIQE---- 153

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
             L+  +            H+ +    +++ I+ E
Sbjct: 154 --LECEKKYDISIV----NHTVEQACNDLIQIIEE 182


>gi|254497535|ref|ZP_05110327.1| tetraacyl disaccharide 4-kinase [Legionella drancourtii LLAP12]
 gi|254353252|gb|EET11995.1| tetraacyl disaccharide 4-kinase [Legionella drancourtii LLAP12]
          Length = 323

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 12/92 (13%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKT  +  L + LQ K   V +     G         V L     + G E    +  A
Sbjct: 59  GVGKTPLVIELAKRLQEKGLTVGIVSRGYGATIKNFPYEVQLHDAATKVGDEP---LLIA 115

Query: 74  ARLDH-------VENVIRPALMEG--KILLCD 96
            R              +R  L +   +I++ D
Sbjct: 116 QRTQCPVVIAPKRTEAVRYLLNKHQSQIIISD 147


>gi|218884460|ref|YP_002428842.1| cytidylate kinase [Desulfurococcus kamchatkensis 1221n]
 gi|254807045|sp|B8D5U4|KCY_DESK1 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|218766076|gb|ACL11475.1| cytidylate kinase [Desulfurococcus kamchatkensis 1221n]
          Length = 185

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRF 27
          I F G  G+GKTT    +  +
Sbjct: 4  IVFSGPPGSGKTTQAKRVAEY 24


>gi|183984103|ref|YP_001852394.1| bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit
           1) + adenylylsulfate kinase [Mycobacterium marinum M]
 gi|183177429|gb|ACC42539.1| bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit
           1) + adenylylsulfate kinase [Mycobacterium marinum M]
          Length = 616

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 19/86 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK++   L++R L  +    +                 +L       G  A+   
Sbjct: 452 GLSGAGKSSVAMLVERKLLEEGVAAY-----------------VLDGDNLRHGLNADLGF 494

Query: 71  FAAARLDHVENVIRPA--LMEGKILL 94
             A R +++  +   A  L +   ++
Sbjct: 495 SMADRAENLRRLAHVAVLLADCGHVV 520


>gi|167758333|ref|ZP_02430460.1| hypothetical protein CLOSCI_00672 [Clostridium scindens ATCC 35704]
 gi|167664230|gb|EDS08360.1| hypothetical protein CLOSCI_00672 [Clostridium scindens ATCC 35704]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 81/227 (35%), Gaps = 61/227 (26%)

Query: 2   NSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CG 58
             G+ I   G  GAGK T +  LLK++          TR+P   P  E  R         
Sbjct: 3   KKGILIVVSGFSGAGKGTIMKELLKQYDNYALSISATTRKP--RPGEEEGREYFFKTVKE 60

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY----AY---QGERDS 111
            ++  A+ E I +A                        R++D+ Y    AY   Q E   
Sbjct: 61  FEKMIAKDELIEYA------------------------RYVDNYYGTPRAYVEEQLETGK 96

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              L ++    + V+E  P+ T++L +      + +++R   R +  +D  E +      
Sbjct: 97  DVILEIEIQGALKVKEKFPE-TLLLFVTPPTAKE-LKHRLVGRGTETMDVIEFR------ 148

Query: 172 KRRQIFLDIARNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQ 213
                 ++ A+ + +        IV+       V    +  V +++Q
Sbjct: 149 ------MNRAKEEAEGMDKYDYLIVN------DVLAECVEEVHQIIQ 183


>gi|148560184|ref|YP_001259861.1| ABC transporter ATP-binding protein [Brucella ovis ATCC 25840]
 gi|148371441|gb|ABQ61420.1| ABC transporter, ATP-binding protein [Brucella ovis ATCC 25840]
          Length = 264

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55
           MN G F++  G  GAGK+T + +L    +  +   V     VTR+     A   AR V  
Sbjct: 29  MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87

Query: 56  SCGVDEFGAEA--EAIVFAAAR 75
                  G     E +  AA+R
Sbjct: 88  DPLAGSCGTLTIEENLALAASR 109


>gi|119489884|ref|XP_001262902.1| multidrug resistance protein 1, 2, 3 (p glycoprotein 1, 2, 3)
            [Neosartorya fischeri NRRL 181]
 gi|119411062|gb|EAW21005.1| multidrug resistance protein 1, 2, 3 (p glycoprotein 1, 2, 3)
            [Neosartorya fischeri NRRL 181]
          Length = 1265

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRF 27
              G FI+  G  G GK+T I+LL+RF
Sbjct: 1043 KKGQFIALVGSSGCGKSTIIALLERF 1068


>gi|119488269|ref|XP_001262673.1| ABC multidrug transporter, putative [Neosartorya fischeri NRRL 181]
 gi|119410831|gb|EAW20776.1| ABC multidrug transporter, putative [Neosartorya fischeri NRRL 181]
          Length = 1297

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            + SG F++F G  G GKTT ISLL+RF
Sbjct: 1070 IQSGQFVAFVGPSGCGKTTVISLLERF 1096


>gi|14601593|ref|NP_148133.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
 gi|12230645|sp|Q9YB62|SRP54_AERPE RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|5105423|dbj|BAA80736.1| signal recognition 54 kDa protein [Aeropyrum pernix K1]
          Length = 441

 Score = 37.3 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT    L  +  R+ Y V +       P A E  + +    G   +G      
Sbjct: 103 GVQGSGKTTTAGKLAYYYVRRGYKVGLVSSDTHRPGAYEQLKRLAEEAGAMFYGERE--- 159

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD---RFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                  +     +   L  G +I++ D   R               +   LD ++ I+ 
Sbjct: 160 ---GDPAEIARRGLEDLLSRGAEIVIVDTAGRH----------GHGEEARLLDEMKAIAS 206

Query: 126 QEVMPD 131
           + V PD
Sbjct: 207 K-VRPD 211


>gi|328953520|ref|YP_004370854.1| Cobyrinic acid ac-diamide synthase [Desulfobacca acetoxidans DSM
          11109]
 gi|328453844|gb|AEB09673.1| Cobyrinic acid ac-diamide synthase [Desulfobacca acetoxidans DSM
          11109]
          Length = 255

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+  G  G GKTT  +LL ++ + +   V           A A    L     +E    +
Sbjct: 3  IAVSGKGGVGKTTLAALLIKYFRDQGKKVLAIDADPDANLAVA----LGVPHPEEITPIS 58

Query: 67 EAIVFAAARLD 77
          E     A R +
Sbjct: 59 EMKQLVAERTE 69


>gi|317033746|ref|XP_001395392.2| lipid A export ATP-binding/permease protein msbA [Aspergillus niger
            CBS 513.88]
          Length = 1291

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/25 (64%), Positives = 19/25 (76%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRF 27
            SG F++F G  G GKTT ISLL+RF
Sbjct: 1066 SGQFVAFVGPSGCGKTTVISLLERF 1090


>gi|317497370|ref|ZP_07955693.1| ABC transporter [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895439|gb|EFV17598.1| ABC transporter [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 274

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          ++ G FI+  G  G GK+T + +L  F++
Sbjct: 46 IHRGEFITVLGPSGCGKSTLLKILAGFIK 74


>gi|307328089|ref|ZP_07607269.1| protein of unknown function DUF1205 [Streptomyces violaceusniger Tu
           4113]
 gi|306886208|gb|EFN17214.1| protein of unknown function DUF1205 [Streptomyces violaceusniger Tu
           4113]
          Length = 417

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 57/171 (33%), Gaps = 35/171 (20%)

Query: 28  LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV--FAAARLDHVENVIR- 84
           L    ++V V   P  T         + S G+       +  +        D +EN +  
Sbjct: 24  LAAAGHEVQVASNPALTEH-------IKSTGLTAVTVGTDHNLHEMLTENRDSLENPLSD 76

Query: 85  ---PALMEGKI--LLCDRFLDS-SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL 138
              P L +     +L   F  S  +AYQ   D   H  +   ++       PD  I  D 
Sbjct: 77  WSAPDLDQHSWEQVLMK-FKVSVMFAYQTYNDCMVHELVAYARDW-----QPDLIIW-D- 128

Query: 139 PVDIG---LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
           PV        RV      R   C+D        I+ K R++FL     QP+
Sbjct: 129 PVSYAGPVAARVVGAAHARLLWCID--------IYSKMREVFLTRLAEQPE 171


>gi|298293311|ref|YP_003695250.1| signal recognition particle-docking protein FtsY [Starkeya novella
           DSM 506]
 gi|296929822|gb|ADH90631.1| signal recognition particle-docking protein FtsY [Starkeya novella
           DSM 506]
          Length = 318

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ G+GKTT I  L   L+ +   V +    G T  A A   +
Sbjct: 121 GVNGSGKTTTIGKLASTLRAQGKKVVLAA--GDTFRAAAIEQL 161


>gi|317050618|ref|YP_004111734.1| dephospho-CoA kinase [Desulfurispirillum indicum S5]
 gi|316945702|gb|ADU65178.1| dephospho-CoA kinase [Desulfurispirillum indicum S5]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 40/180 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHV----L 54
           + I   G  G+GK+T  +L    L+ +   V    E G      G+P            +
Sbjct: 1   MLIGLTGGIGSGKSTVSAL----LRARGVPVIDADEIGRAALTAGSPLLPEVVEAFGSHI 56

Query: 55  LSCGVDEFGAEAEAIVFAA-ARLDHVENVIRPALMEGKILLCDR--------FLDSSYAY 105
           L         +  A +F++  R + +  ++ P +   + L  DR        F D++   
Sbjct: 57  LDDQGQLDRRKLRAEIFSSPTRREQLNRLVHPYIARQRDLEIDRLRANHSVLFYDAALLL 116

Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           + E  +                   D  +++    ++ ++RV  R  +     +D    +
Sbjct: 117 ESEARTLM-----------------DAIVVVACEPEVQIRRVMERDGISRQQAVDAINAQ 159


>gi|225010681|ref|ZP_03701151.1| LAO/AO transport system ATPase [Flavobacteria bacterium MS024-3C]
 gi|225005234|gb|EEG43186.1| LAO/AO transport system ATPase [Flavobacteria bacterium MS024-3C]
          Length = 335

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREP-----GGTPAAEAARHVLLSCGVDEF 62
             G+ G GK+T I  L  +L  K      +T +P     GG+   +  R   L+     +
Sbjct: 61  ISGVPGVGKSTLIEALGMYLVEKGLRLAVLTIDPSSQQSGGSILGDKTRMDQLAAHKSAY 120

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
                A         +  + I      G  ++
Sbjct: 121 IRTTAAASTLGGVAQNTRSSILFCEAAGFDVI 152


>gi|149375297|ref|ZP_01893068.1| shikimate kinase [Marinobacter algicola DG893]
 gi|149360333|gb|EDM48786.1| shikimate kinase [Marinobacter algicola DG893]
          Length = 174

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 46/206 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G+ G+GK+T   LL + L         T       A    + ++   G        
Sbjct: 8   VVLIGMPGSGKSTVGVLLAKQL---GLGFIDTDLLIQEEAGRTLQDIVDGDGYQALRRIE 64

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E ++    RLD    VI                  S  Y                E ++ 
Sbjct: 65  EQVLL---RLDVRRQVI--------------STGGSAVY---------------SEPAMT 92

Query: 127 EVMPD-CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
            +  D   + LD+P++  + R+ +  +   S   D  +  + +  E+  +++   A    
Sbjct: 93  HLKADGLVVFLDIPLETVVARIGDYSARGISRRPD--QSLEQLFWER-FKLYSRAAD--- 146

Query: 186 DRCHIVDS-AHSFQSVATNILNIVWE 210
                V+    S + V  +I  ++ +
Sbjct: 147 ---VTVNCIGKSQEDVCDDISMVIMQ 169


>gi|145298801|ref|YP_001141642.1| hypothetical protein ASA_1818 [Aeromonas salmonicida subsp.
          salmonicida A449]
 gi|142851573|gb|ABO89894.1| hypothetical protein ASA_1818 [Aeromonas salmonicida subsp.
          salmonicida A449]
          Length = 103

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAAR 51
           G+ I  EG  G+GK+T I+LLK  L     D              +  R
Sbjct: 46 KGITIGLEGSWGSGKSTVINLLKDKLNSSPRDNRLFFMFDAWAHDGDPLR 95


>gi|126305932|ref|XP_001364904.1| PREDICTED: similar to nucleoside-triphosphate--adenylate kinase
           [Monodelphis domestica]
          Length = 222

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 31/146 (21%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP--GGTPAAEAARHVLLSCGVDEFGA 64
              G  G+GK T    +      ++    H  RE     T     A+  +    +     
Sbjct: 9   VILGPPGSGKGTVCQRIAENFGLQHLSSGHFLRENIRTDTELGVLAKQYIDQGLLIPDHV 68

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               +V      +     ++P L++G                  R  +Q   LD +    
Sbjct: 69  ITRLMV-----SELESRRVQPWLLDGF----------------PRTLTQAEALDKI---- 103

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150
                PD  I L++P +    R+  R
Sbjct: 104 ---CEPDLVISLNIPFETLKDRLSRR 126


>gi|27367084|ref|NP_762611.1| type IV conjugative transfer system coupling protein TraD [Vibrio
           vulnificus CMCP6]
 gi|27358652|gb|AAO07601.1| type IV conjugative transfer system coupling protein TraD [Vibrio
           vulnificus CMCP6]
          Length = 697

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 5/126 (3%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-GAE 65
            +G  GAGK+  I  L R+++ +     +  +     +     A  VLL+         +
Sbjct: 203 IDGTTGAGKSIMIRKLVRWIRAQGDKAIIYDKGCTFTSKFYNPATDVLLNPFDKRCANWD 262

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             +    A   +++   + P   EG    +   R + SS AY+  +D+        L  I
Sbjct: 263 VWSDAIEAPDFENMAAALIPQHGEGDPFWVDSARTIFSSTAYRMSQDNKPCTTERLLSLI 322

Query: 124 SVQEVM 129
              E+ 
Sbjct: 323 LTSELE 328


>gi|11498230|ref|NP_069456.1| signal recognition particle protein Srp54 [Archaeoglobus fulgidus
           DSM 4304]
 gi|3334342|sp|O29633|SRP54_ARCFU RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|2650007|gb|AAB90619.1| signal recognition particle, subunit SRP54 (srp54) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 433

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 18/135 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT  + + ++ + +   V V       PAA E  R +    G+  +G + E  
Sbjct: 100 GLQGSGKTTTTAKMAKYFKDRGMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGE-- 157

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 +  V+N +   L +  +++ D            R + +   +D + +I+ +   
Sbjct: 158 ---KDAVKIVKNALE-KLKDHDMIIID---------TAGRHALEDELIDEMIKIA-EVAR 203

Query: 130 PDCTIILDLPVDIGL 144
           PD  +++ L   IG 
Sbjct: 204 PDYKLLV-LDAAIGQ 217


>gi|47564440|ref|ZP_00235485.1| cobalt transport ATP-binding protein [Bacillus cereus G9241]
 gi|47558592|gb|EAL16915.1| cobalt transport ATP-binding protein [Bacillus cereus G9241]
          Length = 551

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|325830824|ref|ZP_08164208.1| cytidylate kinase [Eggerthella sp. HGA1]
 gi|325487231|gb|EGC89674.1| cytidylate kinase [Eggerthella sp. HGA1]
          Length = 275

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  GAGK+T    + R L
Sbjct: 1  MIIAIDGPSGAGKSTVAKAVAREL 24


>gi|297618363|ref|YP_003703522.1| adenylate kinase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146200|gb|ADI02957.1| adenylate kinase [Syntrophothermus lipocalidus DSM 12680]
          Length = 217

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 41/157 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK T   ++ +           T         +  R  +            
Sbjct: 3   VVLMGPPGAGKGTQAEMIVQ-----------TFGISHISTGDMFREAVAKGTE------- 44

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLF-- 116
                       +    +  +  GK++        + +R   +  A     D        
Sbjct: 45  ------------LGKKAKEYMDAGKLVPDEVTIGIIAERLKQADCAQGFLMDGFPRTVKQ 92

Query: 117 LDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            D+L +I +      D  I +D+P D+ ++R+  R +
Sbjct: 93  ADALADILNQMGRRLDLVINIDVPTDVLIERMTGRLT 129


>gi|269925286|ref|YP_003321909.1| Shikimate kinase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788946|gb|ACZ41087.1| Shikimate kinase [Thermobaculum terrenum ATCC BAA-798]
          Length = 172

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 58/203 (28%), Gaps = 39/203 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G+GK+T   LL     +       T              +    G  +F    
Sbjct: 9   IVLIGLSGSGKSTVGCLLA---SKMGLPYIDTDREIEKHTGMPIEEIFSKFGEGKF---- 61

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                         + I  AL   + ++            G            + ++S  
Sbjct: 62  ---------RQLESDQINRALKGKRAVVS----------LGGGAVLLEENRKLIWDLST- 101

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                  I L   ++    R+++   +R     D   R+   + +  R+ +   A     
Sbjct: 102 ------VIWLQASIETIANRLKHTKEIRPLLAGDDLMRRLENMLQN-RERYYSQAHL--- 151

Query: 187 RCHIVDSAHSFQSVATNILNIVW 209
            C + D   S  ++   IL+ V 
Sbjct: 152 -CIVTD-NKSPYTIVEEILSFVR 172


>gi|323341682|ref|ZP_08081915.1| signal recognition particle protein [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322464107|gb|EFY09300.1| signal recognition particle protein [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 431

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 23/133 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT I+ +   L ++   V +       PAA     +L      + G E     
Sbjct: 107 GLQGSGKTTTIAKIANKLNKEGKKVLLVAADLARPAAIEQLKIL----GTQIGVE----- 157

Query: 71  FAAARLDHVENVIRPALMEGK---ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A        V++ AL  GK   ++L D            R       +  L +I    
Sbjct: 158 VFAQENSTPVEVVKNALAHGKDFDLILID---------TAGRLQIDDALMQQLVDI-QAL 207

Query: 128 VMPDCTIILDLPV 140
             PD  I+L +  
Sbjct: 208 TKPD-EILLSVDA 219


>gi|257791085|ref|YP_003181691.1| cytidylate kinase [Eggerthella lenta DSM 2243]
 gi|257474982|gb|ACV55302.1| cytidylate kinase [Eggerthella lenta DSM 2243]
          Length = 252

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  GAGK+T    + R L
Sbjct: 1  MIIAIDGPSGAGKSTVAKAVAREL 24


>gi|226315285|ref|YP_002775181.1| ABC transporter ATP binding protein [Brevibacillus brevis NBRC
           100599]
 gi|226098235|dbj|BAH46677.1| ABC transporter ATP binding protein [Brevibacillus brevis NBRC
           100599]
          Length = 252

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60
            G   SF G  GAGK+T +S++ R L + +       +E G T ++E A+ + +L     
Sbjct: 26  KGKITSFIGPNGAGKSTLLSMISRLLTKDQGEVFIEGQEIGQTKSSELAKKISILKQSNH 85

Query: 61  EFGAEAEAIVFAAAR 75
                    + +  R
Sbjct: 86  ITVRLTIRELVSFGR 100


>gi|206577580|ref|YP_002238127.1| ABC transporter, ATP-binding protein [Klebsiella pneumoniae 342]
 gi|290509175|ref|ZP_06548546.1| sulfonate/nitrate/taurine transport system ATP-binding protein
          [Klebsiella sp. 1_1_55]
 gi|206566638|gb|ACI08414.1| ABC transporter, ATP-binding protein [Klebsiella pneumoniae 342]
 gi|289778569|gb|EFD86566.1| sulfonate/nitrate/taurine transport system ATP-binding protein
          [Klebsiella sp. 1_1_55]
          Length = 276

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI+  G  G GK+T + ++ 
Sbjct: 47 INQGEFITLLGPSGCGKSTLLKMVA 71


>gi|203284540|ref|YP_002222280.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia duttonii Ly]
 gi|203288074|ref|YP_002223089.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia recurrentis A1]
 gi|201083983|gb|ACH93574.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia duttonii Ly]
 gi|201085294|gb|ACH94868.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Borrelia recurrentis A1]
          Length = 347

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FI+  G  G GKTT I ++  FL +K  +++ 
Sbjct: 35 FITLLGPSGCGKTTLIKIIGGFLNQKEGEIYF 66


>gi|194700530|gb|ACF84349.1| unknown [Zea mays]
          Length = 254

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 38/150 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G+ G+GK+T    L R L  + +              +  R         +
Sbjct: 91  QKGCVVWITGLSGSGKSTLACALSRELHCRGH-------LTYVLDGDNLR----HGLNRD 139

Query: 62  FGAEAEAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119
              +AE       R +++  V   A L     ++C   + S  + Y+ +RD         
Sbjct: 140 LSFKAE------DRAENIRRVGEVAKLFADAGVIC---IASLISPYRRDRD--------- 181

Query: 120 LQEISVQEVMPD---CTIILDLPVDIGLKR 146
               + + ++P      + +DLP+ I   R
Sbjct: 182 ----ACRALLPHSNFIEVFIDLPLKICEAR 207


>gi|156544215|ref|XP_001606701.1| PREDICTED: similar to xpa-binding protein 1 (mbdin) [Nasonia
           vitripennis]
          Length = 378

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 10/100 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA----------RHVLLS 56
           I   G+ G+GKTT +S L   L        +  +P        A          + V+  
Sbjct: 31  IVVLGMAGSGKTTFVSKLVSKLYDTGKPYVINLDPACNEVPYPANIDVRDTVNYKEVMKQ 90

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
             +   G    A+   + + D V  +++ A  + + ++ D
Sbjct: 91  YKLGPNGGIVTALNLFSTKFDQVIELVKQAGKDHEYVVID 130


>gi|157371628|ref|YP_001479617.1| cytochrome c biogenesis protein CcmA [Serratia proteamaculans
          568]
 gi|157323392|gb|ABV42489.1| heme exporter protein CcmA [Serratia proteamaculans 568]
          Length = 226

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G  I  EG  GAGKT+ + +L    + +  +VH 
Sbjct: 41 KPGDIIQVEGPNGAGKTSLLRILAGLARPEGGEVHW 76


>gi|110667331|ref|YP_657142.1| ATPase [Haloquadratum walsbyi DSM 16790]
 gi|109625078|emb|CAJ51497.1| predicted ATPase [Haloquadratum walsbyi DSM 16790]
          Length = 635

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ IS  G  GAGK+T    +  FL   +Y V    +P                G   
Sbjct: 269 QRGVLIS--GSPGAGKSTFAQAVAEFLTDSDYAVKTMEKPRDLQVGSDVTQYTALGGDMA 326

Query: 62  FGAEAEAI 69
             A++  +
Sbjct: 327 KTADSLLL 334


>gi|94989919|ref|YP_598019.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS10270]
 gi|94543427|gb|ABF33475.1| Dephospho-CoA kinase [Streptococcus pyogenes MGAS10270]
          Length = 206

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 44/226 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH-----V 53
           + I   G   +GK+T + ++    ++  Y       V    +  G    EA R      +
Sbjct: 10  MIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFGNQI 65

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           L +    +    +E +      +         +I+  L   +             +  + 
Sbjct: 66  LKADSELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HLAQS 113

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         +    
Sbjct: 114 QAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ---- 168

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   L I   +P    ++D+    +++   + + +  L   R
Sbjct: 169 --------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 206


>gi|6969593|gb|AAF33830.1|AF226282_4 flagellar biosynthetic protein FlhF [Xanthomonas oryzae pv. oryzae]
          Length = 561

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 17/121 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G  I+  G  GAGKTT I+ L +    ++   DV +             R  L S G  
Sbjct: 351 RGGVIALVGPTGAGKTTTIAKLAQRFAAQHTPRDVALVTTDTQRVGG---REQLHSYGRQ 407

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E     A   + + ++    L + K++L D       A  G+RD +    L+ L
Sbjct: 408 LGIAVHE-----ADSAESLLDLFE-RLRDYKLVLID------TAGMGQRDRALAAQLNWL 455

Query: 121 Q 121
           +
Sbjct: 456 R 456


>gi|262394315|ref|YP_003286169.1| hypothetical protein VEA_003544 [Vibrio sp. Ex25]
 gi|262337909|gb|ACY51704.1| hypothetical protein VEA_003544 [Vibrio sp. Ex25]
          Length = 129

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 19/94 (20%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M+    I   G+ G+GKTT    L   L  K+++  +  E                    
Sbjct: 1  MSLAKLILIRGLPGSGKTTLAKQLAIELGAKHFEADMYFENDEGDY---------HFNPT 51

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
          E     E                R  L +GK+++
Sbjct: 52 ELPQAHEWCF----------QQTRKWLNKGKVVI 75


>gi|49186123|ref|YP_029375.1| ABC transporter ATP-binding protein [Bacillus anthracis str.
           Sterne]
 gi|65320605|ref|ZP_00393564.1| COG1122: ABC-type cobalt transport system, ATPase component
           [Bacillus anthracis str. A2012]
 gi|49180050|gb|AAT55426.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           Sterne]
          Length = 553

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 32  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 81

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 82  LSAQEIGMVFQNPENQLVMDTVIQELA 108


>gi|117919318|ref|YP_868510.1| adenylylsulfate kinase [Shewanella sp. ANA-3]
 gi|166221094|sp|A0KTI5|CYSC_SHESA RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|117611650|gb|ABK47104.1| adenylylsulfate kinase [Shewanella sp. ANA-3]
          Length = 205

 Score = 37.3 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+R L    +  +                 LL       G   + 
Sbjct: 29  FTGLSGAGKSTLAGALERALFEAGFHTY-----------------LLDGDNVRHGLCKDL 71

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 72  GFSVADRDENLRRVGEVAKLMVDAGLVVLS 101


>gi|325853933|ref|ZP_08171449.1| hypothetical protein HMPREF9303_1998 [Prevotella denticola CRIS
           18C-A]
 gi|325484270|gb|EGC87200.1| hypothetical protein HMPREF9303_1998 [Prevotella denticola CRIS
           18C-A]
          Length = 309

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 41/129 (31%), Gaps = 32/129 (24%)

Query: 14  GAGKTTHISLLKRFLQR-KNYD--VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GAGKTT   L+  +L   K YD  V     P  +      R +      D +  +A  ++
Sbjct: 71  GAGKTTLTVLMASYLHYVKGYDVAVIDCDFPQYSIHDMRKRDMDTIMKDDYYKVQAYDLL 130

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                        R    +   ++C R                   + S + +     MP
Sbjct: 131 -------------RQLGKKYYPVVCSR---------------AEDAITSAESLYRGGKMP 162

Query: 131 DCTIILDLP 139
           D  I  DLP
Sbjct: 163 D-VIFFDLP 170


>gi|258646231|ref|ZP_05733700.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Dialister invisus DSM 15470]
 gi|260403618|gb|EEW97165.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Dialister invisus DSM 15470]
          Length = 352

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 20/35 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F++F G  G GKTT + ++  F +  + ++ +
Sbjct: 30 KGHFVTFLGPSGCGKTTLLRMVAGFYEPDDGEILL 64


>gi|323340189|ref|ZP_08080453.1| excision endonuclease subunit UvrA [Lactobacillus ruminis ATCC
           25644]
 gi|323092380|gb|EFZ34988.1| excision endonuclease subunit UvrA [Lactobacillus ruminis ATCC
           25644]
          Length = 944

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G FI+  G+ G+GK+T +++ LK+ L  K
Sbjct: 632 GKFIAVTGVSGSGKSTLVNMILKKALAAK 660


>gi|227513593|ref|ZP_03943642.1| deoxyguanosine kinase [Lactobacillus buchneri ATCC 11577]
 gi|227083109|gb|EEI18421.1| deoxyguanosine kinase [Lactobacillus buchneri ATCC 11577]
          Length = 217

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 31/157 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT    +   L                P  +     L      ++G   +      
Sbjct: 10  GVGKTTLTGKIAAHL---GTKAFF------EPVGDNPVLPLYYSNPKQYGFLLQIYFLNK 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
                   +I+ AL +   +L DR  + D+ +  +   D                  +  
Sbjct: 61  RFS-----MIKKALSDDNNVL-DRSIYEDALFTRENNADGNISDTELSVYLKLLDNMMTE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           L ++  +   PD  +  D   D    R++ R    E 
Sbjct: 115 LNQLPKKA--PDLLVYADSDFDTIKYRIKKRGRDYEQ 149


>gi|188576805|ref|YP_001913734.1| flagellar biosynthesis regulator FlhF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188576998|ref|YP_001913927.1| flagellar biosynthesis regulator FlhF [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188521257|gb|ACD59202.1| flagellar biosynthetic protein FlhF [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521450|gb|ACD59395.1| flagellar biosynthetic protein FlhF [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 551

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 17/121 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G  I+  G  GAGKTT I+ L +    ++   DV +             R  L S G  
Sbjct: 341 RGGVIALVGPTGAGKTTTIAKLAQRFAAQHTPRDVALVTTDTQRVGG---REQLHSYGRQ 397

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E     A   + + ++    L + K++L D       A  G+RD +    L+ L
Sbjct: 398 LGIAVHE-----ADSAESLLDLFE-RLRDYKLVLID------TAGMGQRDRALAAQLNWL 445

Query: 121 Q 121
           +
Sbjct: 446 R 446


>gi|170018756|ref|YP_001723710.1| hypothetical protein EcolC_0708 [Escherichia coli ATCC 8739]
 gi|253772176|ref|YP_003035007.1| uncharacterized ATP-binding protein YghS [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300923642|ref|ZP_07139670.1| hypothetical protein HMPREF9548_01835 [Escherichia coli MS 182-1]
 gi|300958366|ref|ZP_07170507.1| hypothetical protein HMPREF9547_04080 [Escherichia coli MS 175-1]
 gi|312972753|ref|ZP_07786926.1| uncharacterized ATP-binding protein yghS [Escherichia coli 1827-70]
 gi|169753684|gb|ACA76383.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
 gi|253323220|gb|ACT27822.1| uncharacterized ATP-binding protein YghS [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260447973|gb|ACX38395.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|300314950|gb|EFJ64734.1| hypothetical protein HMPREF9547_04080 [Escherichia coli MS 175-1]
 gi|300420083|gb|EFK03394.1| hypothetical protein HMPREF9548_01835 [Escherichia coli MS 182-1]
 gi|310332695|gb|EFP99908.1| uncharacterized ATP-binding protein yghS [Escherichia coli 1827-70]
 gi|315614987|gb|EFU95625.1| uncharacterized ATP-binding protein yghS [Escherichia coli 3431]
          Length = 232

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|124028282|ref|YP_001013602.1| GTPase [Hyperthermus butylicus DSM 5456]
 gi|123978976|gb|ABM81257.1| conserved hypothetical ATP binding protein [Hyperthermus
          butylicus DSM 5456]
          Length = 253

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 4  GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          G  I  F G  G+GK+T ++   ++L+     V+  
Sbjct: 2  GKVIVVFVGPAGSGKSTLVAAYSKWLREGGIPVYTV 37


>gi|83776389|dbj|BAE66508.1| unnamed protein product [Aspergillus oryzae]
          Length = 1189

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/25 (64%), Positives = 19/25 (76%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
           SG F++F G  G GKTT ISLL+RF
Sbjct: 964 SGQFVAFVGPSGCGKTTVISLLERF 988


>gi|319940063|ref|ZP_08014417.1| phosphoribulokinase/Uridine kinase family protein [Streptococcus
           anginosus 1_2_62CV]
 gi|319810777|gb|EFW07104.1| phosphoribulokinase/Uridine kinase family protein [Streptococcus
           anginosus 1_2_62CV]
          Length = 213

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 20/169 (11%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK+T    L   L R+  ++ V          +     LL+           A +  A 
Sbjct: 32  SGKSTFAKRLVESLGRERVNLLVA----DLYIIDGEYRDLLAVKEFPEQKVT-ACLPVAH 86

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP---- 130
            L  +E  IR AL  G  ++    +D  +A    +  S    +  ++ +SV   +P    
Sbjct: 87  ELKSLERDIR-ALQSGCDIVT---IDQPWA--PSQRLSAEKPILIVEGMSV-AFLPKELF 139

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           D +I         L+R  +R     +   ++ ER     H+ RR+ +  
Sbjct: 140 DLSICFYTDAATELERRLSRDVAVRNRQPEWIERT----HQARREQYER 184


>gi|312140440|ref|YP_004007776.1| signal recognition particle protein [Rhodococcus equi 103S]
 gi|311889779|emb|CBH49096.1| signal recognition particle protein [Rhodococcus equi 103S]
          Length = 526

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 22/139 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTP----AAEAARHVLL--SCGVD 60
           G++G+GKTT    L ++L+ + +   +     + PG         E A   +     G  
Sbjct: 107 GLQGSGKTTLAGKLAKWLKDQGHTPLLVACDLQRPGAVSQLQIVGERAGAAVFAPHPGTS 166

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             G E    + AA  ++     +  A  +   +++ D            R       +  
Sbjct: 167 IGGGENPLGISAADPVEVARAGVEEARNKQYDVVIVD---------TAGRLGIDEELMAQ 217

Query: 120 LQEISVQEVMPDCTII-LD 137
              I    V PD TI  LD
Sbjct: 218 AAGI-RDAVQPDETIFVLD 235


>gi|300726988|ref|ZP_07060408.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella
           bryantii B14]
 gi|299775711|gb|EFI72301.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella
           bryantii B14]
          Length = 210

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 59/201 (29%), Gaps = 39/201 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65
           I+  G  G+GKTT   +L +               G  P  E    +  L     +    
Sbjct: 3   IAIAGNIGSGKTTLTKMLAKRF-------------GWQPHFEPVANNPYLDDFYGDMNRW 49

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQ 121
           +  +   F   R   V  + +        ++ DR  F D+        D       D   
Sbjct: 50  SFNLQIYFLNQRFKDVVEISK----SKDTIIQDRTIFEDACIFAPNLHDMGMMSDRDFAN 105

Query: 122 EISVQEVM------PDCTIILD--LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              + ++M      PD  I +   +P  IG           E    D+ +   +   +  
Sbjct: 106 YSDLFDLMISLVNLPDLMIYIRSSIPTLIG---------HIEKRGRDFEQSMRIDYLKGL 156

Query: 174 RQIFLDIARNQPDRCHIVDSA 194
              + +  +    +  I+D  
Sbjct: 157 NDRYENWIKGYKGKLLIIDGD 177


>gi|296271586|ref|YP_003654217.1| ABC transporter-like protein [Arcobacter nitrofigilis DSM 7299]
 gi|296095761|gb|ADG91711.1| ABC transporter related protein [Arcobacter nitrofigilis DSM
          7299]
          Length = 284

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTRE-PGGTPAAEAARHV 53
          +  G FI+  G+ G+GKTT + +L    + K    +  T      T  A   R +
Sbjct: 25 IKEGDFIALAGLSGSGKTTLLRILAGLEEAKGEIKIGETYWQNNSTFLAPQKREI 79


>gi|325675945|ref|ZP_08155628.1| signal recognition particle protein [Rhodococcus equi ATCC 33707]
 gi|325553183|gb|EGD22862.1| signal recognition particle protein [Rhodococcus equi ATCC 33707]
          Length = 526

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 22/139 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTP----AAEAARHVLL--SCGVD 60
           G++G+GKTT    L ++L+ + +   +     + PG         E A   +     G  
Sbjct: 107 GLQGSGKTTLAGKLAKWLKDQGHTPLLVACDLQRPGAVSQLQIVGERAGAAVFAPHPGTS 166

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             G E    + AA  ++     +  A  +   +++ D            R       +  
Sbjct: 167 IGGGENPLGISAADPVEVARAGVEEARNKQYDVVIVD---------TAGRLGIDEELMAQ 217

Query: 120 LQEISVQEVMPDCTII-LD 137
              I    V PD TI  LD
Sbjct: 218 AAGI-RDAVQPDETIFVLD 235


>gi|302382204|ref|YP_003818027.1| hypothetical protein Bresu_1092 [Brevundimonas subvibrioides ATCC
          15264]
 gi|302192832|gb|ADL00404.1| protein of unknown function DUF344 [Brevundimonas subvibrioides
          ATCC 15264]
          Length = 248

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 17/44 (38%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
           I FEG + AGK   I  +  +L  +   V    +P      + 
Sbjct: 33 LIVFEGRDAAGKDGAIKRITEYLSPRQTRVVALSKPTERETGQW 76


>gi|257055023|ref|YP_003132855.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Saccharomonospora viridis DSM 43017]
 gi|256584895|gb|ACU96028.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Saccharomonospora viridis DSM 43017]
          Length = 515

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 17/24 (70%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTT    L R+L+++ + 
Sbjct: 110 GLQGSGKTTLAGKLARWLKKQGHT 133


>gi|296123843|ref|YP_003631621.1| ATPase AAA [Planctomyces limnophilus DSM 3776]
 gi|296016183|gb|ADG69422.1| AAA ATPase [Planctomyces limnophilus DSM 3776]
          Length = 296

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY 33
           SG  I+F G  G+GK++ +  +   L+    
Sbjct: 45 TSGNLIAFVGPSGSGKSSLMRAVAAELKSSGQ 76


>gi|229173596|ref|ZP_04301139.1| hypothetical protein bcere0006_26960 [Bacillus cereus MM3]
 gi|228609978|gb|EEK67257.1| hypothetical protein bcere0006_26960 [Bacillus cereus MM3]
          Length = 282

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          MN+   I  EG+ G GK+T   L+   L +   +V +  E
Sbjct: 1  MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKSEVELFLE 39


>gi|229817710|ref|ZP_04447992.1| hypothetical protein BIFANG_02982 [Bifidobacterium angulatum DSM
           20098]
 gi|229785499|gb|EEP21613.1| hypothetical protein BIFANG_02982 [Bifidobacterium angulatum DSM
           20098]
          Length = 596

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 37/116 (31%), Gaps = 30/116 (25%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+  G  GAGKTT I+LL RF     YDV    E          R V L     + G
Sbjct: 380 GKTIALVGPTGAGKTTIINLLSRF-----YDV---AEGSVAIDGHDVRDVTLESLRRQMG 431

Query: 64  ----------------------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
                                    +  + AAAR  H    I         ++ +R
Sbjct: 432 VMLQDTFIFSGTVRENIRYGRLDATDEEIMAAARAVHAHEFIIDLPDGYDTVVQER 487


>gi|223993863|ref|XP_002286615.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
           [Thalassiosira pseudonana CCMP1335]
 gi|220977930|gb|EED96256.1| SRP54, signal recognition particle 54 kDa protein 2-like protein
           [Thalassiosira pseudonana CCMP1335]
          Length = 451

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 19/139 (13%)

Query: 1   MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSC 57
           M  G    I F G++GAGKTT I+    + QRK +   +         A +  +      
Sbjct: 109 MKRGKPNIILFVGLQGAGKTTSIAKYAHYYQRKGWKTAMVCADTFRAGAFDQLKQNATKL 168

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLF 116
            +  +G+  EA     A     E  +   + +G  I++ D            R   +   
Sbjct: 169 RIPFYGSYTEADPVLIA-----EEGVERFISDGYEIIIVD---------TSGRHRQEETL 214

Query: 117 LDSLQEISVQEVMPDCTII 135
            + +QEIS   V PD TI 
Sbjct: 215 FEEMQEISA-AVRPDNTIF 232


>gi|209516457|ref|ZP_03265312.1| ABC transporter related [Burkholderia sp. H160]
 gi|209503061|gb|EEA03062.1| ABC transporter related [Burkholderia sp. H160]
          Length = 356

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 9/48 (18%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTR 39
          MN   G FI+F G  G GKTT + ++  F       ++    DV   R
Sbjct: 24 MNIGQGEFITFLGPSGCGKTTVLRMIAGFETPTRGAIRLNGRDVTRVR 71


>gi|254412173|ref|ZP_05025948.1| adenylate kinases subfamily [Microcoleus chthonoplastes PCC 7420]
 gi|196181139|gb|EDX76128.1| adenylate kinases subfamily [Microcoleus chthonoplastes PCC 7420]
          Length = 184

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 75/208 (36%), Gaps = 39/208 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F G  GAGK T    + +  Q  +    D+  +     T   + A+  +      E   
Sbjct: 5   VFLGPPGAGKGTQAQHIAQLYQIPHISTGDILRSAITASTSLGQKAQSYM---DGGELVP 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   +     RL       +P    G  +L D F          R+ SQ  FL++L +  
Sbjct: 62  DKLILDLIRDRLK------QPDTQAG-WIL-DGF---------PRNVSQAAFLENLLQDL 104

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-----ACLDYFERKDVMIHEKRRQIFLD 179
            Q    D  I LD+P +  LKR+ +R    ++       LD + ++   + E  R     
Sbjct: 105 DQRC--DYAIYLDVPDESILKRLLSRGRQDDNEQTIRRRLDVYRQQTAPVIEFYRD--HS 160

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207
           I R        +D     ++V  ++  +
Sbjct: 161 ILRE-------IDGDRPMEAVTDSLKQV 181


>gi|168700596|ref|ZP_02732873.1| cell division protein FtsY [Gemmata obscuriglobus UQM 2246]
          Length = 304

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ G+GKTT I+ L   LQ     V +
Sbjct: 108 GVNGSGKTTSIAKLANRLQADGKKVLL 134


>gi|165869066|ref|ZP_02213726.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0488]
 gi|167637295|ref|ZP_02395575.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0193]
 gi|170705018|ref|ZP_02895483.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0389]
 gi|164715792|gb|EDR21309.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0488]
 gi|167514802|gb|EDR90168.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0193]
 gi|170129873|gb|EDS98735.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0389]
          Length = 550

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 29  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 78

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 79  LSAQEIGMVFQNPENQLVMDTVIQELA 105


>gi|157362996|ref|YP_001469763.1| signal recognition particle protein [Thermotoga lettingae TMO]
 gi|157313600|gb|ABV32699.1| signal recognition particle protein [Thermotoga lettingae TMO]
          Length = 433

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           G++G+GKTT  + L  +L++    V +       PAA
Sbjct: 106 GLQGSGKTTTAAKLANYLRKSGRTVLLVAADTYRPAA 142


>gi|253566993|ref|ZP_04844444.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 3_2_5]
 gi|265764365|ref|ZP_06092933.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Bacteroides sp. 2_1_16]
 gi|146325062|sp|Q64SQ6|POTA_BACFR RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|251944117|gb|EES84626.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 3_2_5]
 gi|263256973|gb|EEZ28319.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Bacteroides sp. 2_1_16]
          Length = 461

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|30263273|ref|NP_845650.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. Ames]
 gi|47528648|ref|YP_019997.1| ABC transporter ATP-binding protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|167632219|ref|ZP_02390546.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0442]
 gi|170684678|ref|ZP_02875903.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0465]
 gi|177649983|ref|ZP_02932984.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0174]
 gi|190564748|ref|ZP_03017669.1| ABC transporter, ATP-binding protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227813856|ref|YP_002813865.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. CDC
           684]
 gi|229602617|ref|YP_002867533.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0248]
 gi|254685888|ref|ZP_05149747.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254738358|ref|ZP_05196061.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           Western North America USA6153]
 gi|254742475|ref|ZP_05200160.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           Kruger B]
 gi|254752674|ref|ZP_05204710.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           Vollum]
 gi|254761189|ref|ZP_05213213.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           Australia 94]
 gi|56748757|sp|Q81N53|Y3364_BACAN RecName: Full=Putative ABC transporter ATP-binding protein
           BA_3364/GBAA_3364/BAS3118
 gi|30257907|gb|AAP27136.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. Ames]
 gi|47503796|gb|AAT32472.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|167532517|gb|EDR95153.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0442]
 gi|170670938|gb|EDT21676.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0465]
 gi|172083935|gb|EDT68994.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0174]
 gi|190564065|gb|EDV18029.1| ABC transporter, ATP-binding protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227005218|gb|ACP14961.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. CDC
           684]
 gi|229267025|gb|ACQ48662.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
           A0248]
          Length = 551

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G FI+  G  G+GKTT +   K+ L         T   G           LL    D 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALM 88
             A+   +VF       V + +   L 
Sbjct: 80  LSAQEIGMVFQNPENQLVMDTVIQELA 106


>gi|329960967|ref|ZP_08299246.1| uridine kinase [Bacteroides fluxus YIT 12057]
 gi|328532253|gb|EGF59057.1| uridine kinase [Bacteroides fluxus YIT 12057]
          Length = 203

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 65/195 (33%), Gaps = 26/195 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 2   LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              +++       HV      AL EG  +        +Y+Y       + + ++  + I 
Sbjct: 61  FEWSLL-----SKHVA-----ALREGNSI-----EQPTYSYLTCTRQPETIHIEPREVII 105

Query: 125 VQEVMP----------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           ++ ++           D  I +D   D  L RV  R  +      +    +   I +   
Sbjct: 106 IEGILALCDKKLRSMMDLKIFVDADPDERLIRVIQRDVVERGRTAEAVMERYTRILKPMH 165

Query: 175 QIFLDIARNQPDRCH 189
           Q F++  +   D   
Sbjct: 166 QQFIEPCKRYADLIV 180


>gi|303390938|ref|XP_003073699.1| signal recognition particle GTPase [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303302847|gb|ADM12339.1| signal recognition particle GTPase [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 425

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 15/138 (10%)

Query: 2   NSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           + G+F I F G+ G GK+T ++ +  +L +    V++      T  A A   +       
Sbjct: 213 HKGVFSICFVGVNGVGKSTSLAKICYWLLKNKLKVYIAA--CDTFRAGAIEQLKTHVERF 270

Query: 61  EFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           + G  +       +           I+ A  EG  ++    +D+  A +     +  + L
Sbjct: 271 QLGGYSVGFYQKGYGKDDASVARCAIQEAQHEGYDVIL---IDT--AGRMHNKKNLMMSL 325

Query: 118 DSLQEISVQEVMPDCTII 135
             L +I+     PD  I 
Sbjct: 326 TKLMKIN----KPDHIIY 339


>gi|298385276|ref|ZP_06994835.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
 gi|298262420|gb|EFI05285.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
          Length = 181

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 25/163 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S++ +     +  VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGSPGTGKTTTASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL+  
Sbjct: 60  QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           + +  ++      I+L    +  +KR   R  L     ++  E
Sbjct: 97  RALVREDYEVHY-IVLRASKEETMKRAVERSKLDRKTNVELVE 138


>gi|302504166|ref|XP_003014042.1| ABC multidrug transporter, putative [Arthroderma benhamiae CBS
            112371]
 gi|291177609|gb|EFE33402.1| ABC multidrug transporter, putative [Arthroderma benhamiae CBS
            112371]
          Length = 1260

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRF 27
            G F++F G  G GK+T I+LL RF
Sbjct: 1039 GKFVAFVGPSGCGKSTMINLLCRF 1062


>gi|238895084|ref|YP_002919819.1| putative ABC transport system ATP-binding component [Klebsiella
          pneumoniae NTUH-K2044]
 gi|238547401|dbj|BAH63752.1| putative ABC transport system ATP-binding component [Klebsiella
          pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 276

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI+  G  G GK+T + ++ 
Sbjct: 47 INQGEFITLLGPSGCGKSTLLKMVA 71


>gi|227510580|ref|ZP_03940629.1| deoxyguanosine kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190232|gb|EEI70299.1| deoxyguanosine kinase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 217

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 31/157 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT    +   L                P  +     L      ++G   +      
Sbjct: 10  GVGKTTLTGKIAAHL---GTKAFF------EPVGDNPVLPLYYSNPKQYGFLLQIYFLNK 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
                   +I+ AL +   +L DR  + D+ +  +   D                  +  
Sbjct: 61  RFS-----MIKKALSDDNNVL-DRSIYEDALFTRENNADGNISDTELSVYLKLLDNMMTE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           L ++  +   PD  +  D   D    R++ R    E 
Sbjct: 115 LNQLPKKA--PDLLVYADSDFDTIKYRIKKRGRDYEQ 149


>gi|217967158|ref|YP_002352664.1| ABC transporter [Dictyoglomus turgidum DSM 6724]
 gi|217336257|gb|ACK42050.1| ABC transporter, conserved site [Dictyoglomus turgidum DSM 6724]
          Length = 432

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          N G FI+  G  G+GK+T + ++   L+     V+   E
Sbjct: 31 NEGDFIALLGPSGSGKSTILRVIAGLLKPNKGKVYYKGE 69


>gi|194324332|ref|ZP_03058105.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. novicida FTE]
 gi|194321397|gb|EDX18882.1| signal recognition particle-docking protein FtsY [Francisella
           tularensis subsp. novicida FTE]
          Length = 343

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R    +        + E  
Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GNRNNTHVVYQHE-- 202

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 203 --GADSASVIYDAISSAKSKGIDVVIAD 228


>gi|195589766|ref|XP_002084620.1| GD12739 [Drosophila simulans]
 gi|194196629|gb|EDX10205.1| GD12739 [Drosophila simulans]
          Length = 188

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 41/208 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTRE---PGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G  G+GK T    ++     K+ D     E      + A +  +  L             
Sbjct: 12  GGPGSGKGTQAQKIQEQYGFKHIDPIALVEMEVETKSSAGQKIQKSLSDGNAIPLS---- 67

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                      +  +I   LM        R +   +   G         L+  + +    
Sbjct: 68  ----------QIVPLIEKQLMSH------RGVLKGFVIDGY-----PADLEEAEILENGF 106

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
             P+  I+LDL    G  R  +  + R S  + Y E                +    P  
Sbjct: 107 GSPNLIIVLDLDQATGSTRSSSSRAPRPSLSM-YIESSK------------AVLERYPQS 153

Query: 188 CHIVDSAHSFQSVATNILNIVWELVQKR 215
              +D++    ++   I   +  ++++ 
Sbjct: 154 VLKIDASQEPDTMFQEIKLNMDNIIKRH 181


>gi|183984206|ref|YP_001852497.1| hypothetical protein MMAR_4234 [Mycobacterium marinum M]
 gi|183177532|gb|ACC42642.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
          Length = 714

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
             G +G GK+T   L      ++ +   V R   GTP
Sbjct: 30 VILGPDGVGKSTLARLAAEHFAQR-HPATVIRWVTGTP 66


>gi|166031781|ref|ZP_02234610.1| hypothetical protein DORFOR_01482 [Dorea formicigenerans ATCC
          27755]
 gi|166028234|gb|EDR46991.1| hypothetical protein DORFOR_01482 [Dorea formicigenerans ATCC
          27755]
          Length = 641

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          G  GAGKTT + ++   +Q    +V +TR
Sbjct: 35 GPNGAGKTTLLKMIVGEIQADGGNVVLTR 63


>gi|118616716|ref|YP_905048.1| hypothetical protein MUL_0955 [Mycobacterium ulcerans Agy99]
 gi|118568826|gb|ABL03577.1| conserved hypothetical membrane protein [Mycobacterium ulcerans
          Agy99]
          Length = 701

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 8  SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
             G +G GK+T   L      ++ +   V R   GTP
Sbjct: 17 VILGPDGVGKSTLARLAAEHFAQR-HPATVIRWVTGTP 53


>gi|84624135|ref|YP_451507.1| flagellar biosynthesis regulator FlhF [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|84368075|dbj|BAE69233.1| flagellar biosynthetic protein FlhF [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 552

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 17/121 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G  I+  G  GAGKTT I+ L +    ++   DV +             R  L S G  
Sbjct: 342 RGGVIALVGPTGAGKTTTIAKLAQRFAAQHTPRDVALVTTDTQRVGG---REQLHSYGRQ 398

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E     A   + + ++    L + K++L D       A  G+RD +    L+ L
Sbjct: 399 LGVAVHE-----ADSAESLLDLFE-RLRDYKLVLID------TAGMGQRDRALAAQLNWL 446

Query: 121 Q 121
           +
Sbjct: 447 R 447


>gi|15828560|ref|NP_325920.1| cytidylate kinase (CK) (cytidine monophosphate kinase) (CMP
          kinase) [Mycoplasma pulmonis UAB CTIP]
 gi|14089502|emb|CAC13262.1| CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP
          KINASE) [Mycoplasma pulmonis]
          Length = 223

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M   + I+ +G  G GK+T    L   L 
Sbjct: 3  MTKNINIAIDGPSGVGKSTIAKKLADHLN 31


>gi|158314164|ref|YP_001506672.1| hypothetical protein Franean1_2332 [Frankia sp. EAN1pec]
 gi|158109569|gb|ABW11766.1| conserved hypothetical protein [Frankia sp. EAN1pec]
          Length = 179

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 30/170 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T+       L+R+ Y      E   T             G +   AE E + 
Sbjct: 24  GLPGSGKSTYARA----LERRGYARLSIDEIVWTWTGR--------DGAELDPAEYEHLK 71

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             A R     N++R    +  I++ D        Y      ++  +  +++    + V+ 
Sbjct: 72  STAERR-LWGNLVRLMKAKVPIVI-D--------YSFWSRGTRDQYKAAIESHGCRWVL- 120

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACL----DYFERKDVMIHEKRRQI 176
              + L   ++   +R+  R    ++  +    D  ER      E   + 
Sbjct: 121 ---VFLPADLETLRRRLAIRNQRNDANSVTVSDDLLERYFANFQEPVGEG 167


>gi|15607873|ref|NP_215247.1| adenylate kinase [Mycobacterium tuberculosis H37Rv]
 gi|15840140|ref|NP_335177.1| adenylate kinase [Mycobacterium tuberculosis CDC1551]
 gi|31791919|ref|NP_854412.1| adenylate kinase [Mycobacterium bovis AF2122/97]
 gi|121636655|ref|YP_976878.1| adenylate kinase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148660508|ref|YP_001282031.1| adenylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|148821938|ref|YP_001286692.1| adenylate kinase [Mycobacterium tuberculosis F11]
 gi|167968292|ref|ZP_02550569.1| adenylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|215402517|ref|ZP_03414698.1| adenylate kinase [Mycobacterium tuberculosis 02_1987]
 gi|215410291|ref|ZP_03419099.1| adenylate kinase [Mycobacterium tuberculosis 94_M4241A]
 gi|215425978|ref|ZP_03423897.1| adenylate kinase [Mycobacterium tuberculosis T92]
 gi|215429574|ref|ZP_03427493.1| adenylate kinase [Mycobacterium tuberculosis EAS054]
 gi|215444859|ref|ZP_03431611.1| adenylate kinase [Mycobacterium tuberculosis T85]
 gi|218752384|ref|ZP_03531180.1| adenylate kinase [Mycobacterium tuberculosis GM 1503]
 gi|224989127|ref|YP_002643814.1| adenylate kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797677|ref|YP_003030678.1| adenylate kinase adk [Mycobacterium tuberculosis KZN 1435]
 gi|254231050|ref|ZP_04924377.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis C]
 gi|254363679|ref|ZP_04979725.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549695|ref|ZP_05140142.1| adenylate kinase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260185616|ref|ZP_05763090.1| adenylate kinase [Mycobacterium tuberculosis CPHL_A]
 gi|260199744|ref|ZP_05767235.1| adenylate kinase [Mycobacterium tuberculosis T46]
 gi|260203905|ref|ZP_05771396.1| adenylate kinase [Mycobacterium tuberculosis K85]
 gi|289442134|ref|ZP_06431878.1| adenylate kinase adk [Mycobacterium tuberculosis T46]
 gi|289446293|ref|ZP_06436037.1| adenylate kinase adk [Mycobacterium tuberculosis CPHL_A]
 gi|289552990|ref|ZP_06442200.1| adenylate kinase adk [Mycobacterium tuberculosis KZN 605]
 gi|289573341|ref|ZP_06453568.1| adenylate kinase adk [Mycobacterium tuberculosis K85]
 gi|289744457|ref|ZP_06503835.1| adenylate kinase adk [Mycobacterium tuberculosis 02_1987]
 gi|289749241|ref|ZP_06508619.1| adenylate kinase adk [Mycobacterium tuberculosis T92]
 gi|289752780|ref|ZP_06512158.1| adenylate kinase [Mycobacterium tuberculosis EAS054]
 gi|289756821|ref|ZP_06516199.1| adenylate kinase [Mycobacterium tuberculosis T85]
 gi|289760860|ref|ZP_06520238.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis GM 1503]
 gi|294996216|ref|ZP_06801907.1| adenylate kinase [Mycobacterium tuberculosis 210]
 gi|297633233|ref|ZP_06951013.1| adenylate kinase [Mycobacterium tuberculosis KZN 4207]
 gi|297730213|ref|ZP_06959331.1| adenylate kinase [Mycobacterium tuberculosis KZN R506]
 gi|298524224|ref|ZP_07011633.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306787756|ref|ZP_07426078.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu004]
 gi|306794524|ref|ZP_07432826.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu005]
 gi|306796489|ref|ZP_07434791.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu006]
 gi|306970947|ref|ZP_07483608.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu010]
 gi|313657540|ref|ZP_07814420.1| adenylate kinase [Mycobacterium tuberculosis KZN V2475]
 gi|60392509|sp|P69439|KAD_MYCBO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|60392510|sp|P69440|KAD_MYCTU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|166980332|sp|A1KGL4|KAD_MYCBP RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|166980336|sp|A5U0B9|KAD_MYCTA RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|254806997|sp|C1AL67|KAD_MYCBT RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|42543246|pdb|1P4S|A Chain A, Solution Structure Of Mycobacterium Tuberculosis Adenylate
           Kinase
 gi|2911007|emb|CAA17500.1| PROBABLE ADENYLATE KINASE ADK (ATP-AMP TRANSPHOSPHORYLASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|4191722|gb|AAD09879.1| adenylate kinase [Mycobacterium bovis]
 gi|13880292|gb|AAK44991.1| adenylate kinase [Mycobacterium tuberculosis CDC1551]
 gi|31617506|emb|CAD93616.1| PROBABLE ADENYLATE KINASE ADK (ATP-AMP TRANSPHOSPHORYLASE)
           [Mycobacterium bovis AF2122/97]
 gi|121492302|emb|CAL70769.1| Probable adenylate kinase adk [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|124600109|gb|EAY59119.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis C]
 gi|134149193|gb|EBA41238.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504660|gb|ABQ72469.1| adenylate kinase [Mycobacterium tuberculosis H37Ra]
 gi|148720465|gb|ABR05090.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis F11]
 gi|224772240|dbj|BAH25046.1| adenylate kinase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319180|gb|ACT23783.1| adenylate kinase adk [Mycobacterium tuberculosis KZN 1435]
 gi|289415053|gb|EFD12293.1| adenylate kinase adk [Mycobacterium tuberculosis T46]
 gi|289419251|gb|EFD16452.1| adenylate kinase adk [Mycobacterium tuberculosis CPHL_A]
 gi|289437622|gb|EFD20115.1| adenylate kinase adk [Mycobacterium tuberculosis KZN 605]
 gi|289537772|gb|EFD42350.1| adenylate kinase adk [Mycobacterium tuberculosis K85]
 gi|289684985|gb|EFD52473.1| adenylate kinase adk [Mycobacterium tuberculosis 02_1987]
 gi|289689828|gb|EFD57257.1| adenylate kinase adk [Mycobacterium tuberculosis T92]
 gi|289693367|gb|EFD60796.1| adenylate kinase [Mycobacterium tuberculosis EAS054]
 gi|289708366|gb|EFD72382.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis GM 1503]
 gi|289712385|gb|EFD76397.1| adenylate kinase [Mycobacterium tuberculosis T85]
 gi|298494018|gb|EFI29312.1| adenylate kinase adk (ATP-AMP transphosphorylase) [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308335665|gb|EFP24516.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu004]
 gi|308337122|gb|EFP25973.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu005]
 gi|308343147|gb|EFP31998.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu006]
 gi|308359567|gb|EFP48418.1| adenylate kinase adk [Mycobacterium tuberculosis SUMu010]
 gi|323720860|gb|EGB29927.1| adenylate kinase adk [Mycobacterium tuberculosis CDC1551A]
 gi|326905045|gb|EGE51978.1| adenylate kinase adk [Mycobacterium tuberculosis W-148]
 gi|328457457|gb|AEB02880.1| adenylate kinase adk [Mycobacterium tuberculosis KZN 4207]
          Length = 181

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 49/210 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSCGVDEFGAE 65
           G  GAGK T    L   L         T E       E  +        L  G       
Sbjct: 7   GPPGAGKGTQAVKLAEKL---GIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDL 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124
              +V         + +  P    G   + D +  S                 +L E + 
Sbjct: 64  TNELVD--------DRLNNPDAANGF--ILDGYPRS------------VEQAKALHEMLE 101

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLD--- 179
            +    D  +   +  ++ L+R++ R    ++    L+              +++ D   
Sbjct: 102 RRGTDIDAVLEFRVSEEVLLERLKGRGRADDTDDVILNRM------------KVYRDETA 149

Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +     D+   VD+  +   V    L  +
Sbjct: 150 PLLEYYRDQLKTVDAVGTMDEVFARALRAL 179


>gi|317181467|dbj|BAJ59251.1| shikimate kinase [Helicobacter pylori F57]
          Length = 162

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVRGIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|313884409|ref|ZP_07818170.1| adenylate kinase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620193|gb|EFR31621.1| adenylate kinase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 216

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 54/232 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T   ++      ++YD+            +  R  + +    E G +A+A  
Sbjct: 7   GLPGAGKGTQSEMI-----SRDYDMIHI------ATGDIFREAIKNQ--TELGKQAQAFT 53

Query: 71  FAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSLQEISVQ 126
            A   +  +   N+++  L +  +        + +   G   +         +L++I+  
Sbjct: 54  DAGNLVPDEITNNLVKERLAQSDV------KANGFMLDGYPRTLNQAQALEANLKDINSS 107

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLR--------------------ESACLDYFERKD 166
               D  I + +  ++  +R+  R   R                         D+++R+D
Sbjct: 108 L---DAVIYIKVDPEVLKERLSGRIICRSCGATYHKLYNPPKVDGVCDNCGASDFYQRED 164

Query: 167 VMIHEKRRQIFLDIARNQP--DRCHI------VDSAHSFQSVATNILNIVWE 210
               +   +I L +    P  D          V+     + V  +I +I+ E
Sbjct: 165 DKPEKVSHRIQLQMDSISPILDHYRQEGILHEVNGQEDIEVVYRHIRDILGE 216


>gi|308069138|ref|YP_003870743.1| Hypothetical ABC transporter ATP-binding protein [Paenibacillus
           polymyxa E681]
 gi|305858417|gb|ADM70205.1| Hypothetical ABC transporter ATP-binding protein [Paenibacillus
           polymyxa E681]
          Length = 617

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           I+  G  GAGKTT ++LL RF +  + ++++     GTP ++  R  +
Sbjct: 407 IAIVGPTGAGKTTLVNLLMRFYELNDGEIYI----DGTPISQLTRENI 450


>gi|261250379|ref|ZP_05942954.1| adenylylsulfate kinase [Vibrio orientalis CIP 102891]
 gi|260938948|gb|EEX94935.1| adenylylsulfate kinase [Vibrio orientalis CIP 102891]
          Length = 205

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L +  Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALETRLAKSGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|255010608|ref|ZP_05282734.1| uridine kinase [Bacteroides fragilis 3_1_12]
 gi|313148419|ref|ZP_07810612.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137186|gb|EFR54546.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 202

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 2   LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
              +++       HV       L EGK +    +   +   Q E    +   +  ++ I 
Sbjct: 61  FEWSLL-----SKHVS-----MLREGKCIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 110

Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 ++ +M D  I +D   D  L RV  R  +      +
Sbjct: 111 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVVERGRTAE 151


>gi|229023254|ref|ZP_04179764.1| ABC transporter ATP-binding protein [Bacillus cereus AH1272]
 gi|228738048|gb|EEL88534.1| ABC transporter ATP-binding protein [Bacillus cereus AH1272]
          Length = 330

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKKGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229132617|ref|ZP_04261465.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-ST196]
 gi|228650849|gb|EEL06836.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-ST196]
          Length = 330

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKKGEFTTLLGPSGCGKTTLLRMIA 49


>gi|152968871|ref|YP_001333980.1| ATP-binding protein of glutamate/aspartate transport system
          [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150953720|gb|ABR75750.1| ATP-binding protein of glutamate/aspartate transport system
          [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 272

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P    +  A R +
Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLSGGEILIDGKPTSRLSGSALRQL 98


>gi|86359446|ref|YP_471338.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli CFN 42]
 gi|86283548|gb|ABC92611.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli CFN 42]
          Length = 270

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +G F+S  G  G+GK+T + LL + L+
Sbjct: 30 NGEFVSIVGPSGSGKSTVLRLLTQALR 56


>gi|56707294|ref|YP_169190.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110669764|ref|YP_666321.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis FSC198]
 gi|254369976|ref|ZP_04985984.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis FSC033]
 gi|254874132|ref|ZP_05246842.1| signal recognition particle receptor ftsY [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|56603786|emb|CAG44753.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110320097|emb|CAL08136.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151568222|gb|EDN33876.1| signal recognition particle receptor FtsY [Francisella tularensis
           subsp. tularensis FSC033]
 gi|254840131|gb|EET18567.1| signal recognition particle receptor ftsY [Francisella tularensis
           subsp. tularensis MA00-2987]
          Length = 343

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G GKTT I  L + LQ +   V +        AA E  R             + E  
Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 202

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCD 96
              A     + + I  A  +G  +++ D
Sbjct: 203 --GADSASVIYDAIGSAKSKGIDVVIAD 228


>gi|56478279|ref|YP_159868.1| arsenical pump-driving ATPase [Aromatoleum aromaticum EbN1]
 gi|56314322|emb|CAI08967.1| arsenical pump-driving ATPase [Aromatoleum aromaticum EbN1]
          Length = 592

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 23/54 (42%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G GKTT  + +   L ++ + VH+T        A+     L +  V     +AE
Sbjct: 340 GVGKTTLAAAIAVELAQRGFPVHLTTSDPAAHLADTLDGSLANLTVSRIDPQAE 393


>gi|116753759|ref|YP_842877.1| ABC transporter related [Methanosaeta thermophila PT]
 gi|116665210|gb|ABK14237.1| ABC transporter related protein [Methanosaeta thermophila PT]
          Length = 266

 Score = 36.9 bits (85), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV 53
           G  I+  G  G GKTT + ++   L           R+       E AR +
Sbjct: 31 RGRVITLLGPNGCGKTTLLKIINGLLPPTSGRVYVDCRDTRSMKPGEMARRM 82


>gi|323698032|ref|ZP_08109944.1| putative adenylylsulfate kinase [Desulfovibrio sp. ND132]
 gi|323457964|gb|EGB13829.1| putative adenylylsulfate kinase [Desulfovibrio desulfuricans ND132]
          Length = 195

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 36/160 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L+  L  +  DV + R        E  +             E    +
Sbjct: 15  GLPGSGKSTLADGLRDALTARGVDVELLRMD------ERRKAYFPEPRYTREERETAYRL 68

Query: 71  FA--AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           FA  AARL          +  G+ ++ D            R  ++ L     +      +
Sbjct: 69  FAEEAARL----------VRRGRNVILDGSAYK----AAMRRYARALIPRFAEVFVHCGL 114

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDY--FERKD 166
                       D  + R   R + +  A L     ER+ 
Sbjct: 115 ------------DTAMAREAGRPAGKVMADLYRKALERRK 142


>gi|312127285|ref|YP_003992159.1| ABC transporter-like protein [Caldicellulosiruptor hydrothermalis
          108]
 gi|311777304|gb|ADQ06790.1| ABC transporter related protein [Caldicellulosiruptor
          hydrothermalis 108]
          Length = 278

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
           G F++  G+ G+GK+T   L+   L  +  DV V     
Sbjct: 34 RGEFVAILGLNGSGKSTLAKLINGLLIPEKGDVIVDSMNT 73


>gi|296283558|ref|ZP_06861556.1| TrwC protein [Citromicrobium bathyomarinum JL354]
          Length = 970

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
           I+ +GI GAGK++ +  +   L+ + + V 
Sbjct: 474 IAVQGIAGAGKSSVLKPVAEVLRDEGHPVI 503


>gi|254581682|ref|XP_002496826.1| ZYRO0D09020p [Zygosaccharomyces rouxii]
 gi|238939718|emb|CAR27893.1| ZYRO0D09020p [Zygosaccharomyces rouxii]
          Length = 487

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 78/212 (36%), Gaps = 7/212 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKT+  + +   L    + V ++ +    P     R        D     A  + 
Sbjct: 51  GPSGSGKTSVAAKIVSSLNVP-WTVLISLDNFYKPLNAEQRRTAFENNYDFDHPTALDLD 109

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            A   +  ++   +  +     +  +R  + +    G         + +L +  + ++M 
Sbjct: 110 LAYEAISSLKEGKKTTIPVYSFVEHNRIPNKNITIYGASIIV-LEGIYTLYDKRLLDLM- 167

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARNQPDRCH 189
           D  I +D  +D+ L R  +R  +     L+   E+ +    +   + +L     + D   
Sbjct: 168 DLKIYVDADLDVCLARRLSRDIVYRGRDLEGCLEQWER-FVKPNAERYLRPKMKEADAIV 226

Query: 190 --IVDSAHSFQSVATNILNIVWELVQKRVSPL 219
             + D+  + + +  +I + + +  ++ +  L
Sbjct: 227 PSLTDNGVAVELIINHIKSRLQQKSEEHLKEL 258


>gi|227548444|ref|ZP_03978493.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
          DSM 44291]
 gi|227079488|gb|EEI17451.1| conserved hypothetical protein [Corynebacterium lipophiloflavum
          DSM 44291]
          Length = 162

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 8/54 (14%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDVHVT--REPGGTPAAEAARHV---LLSC 57
           +G  GAGKTT   L+   L      V       PG    AE AR V   +L  
Sbjct: 14 IDGPSGAGKTTLAVLIGERL---GIKVVHLDDFYPGWGGLAEGARMVADDVLHP 64


>gi|170758420|ref|YP_001787829.1| guanylate kinase [Clostridium botulinum A3 str. Loch Maree]
 gi|169405409|gb|ACA53820.1| guanylate kinase [Clostridium botulinum A3 str. Loch Maree]
          Length = 209

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 46/216 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
             GL I   G  GAGK T     K  L++++  V     TR P          +  L+  
Sbjct: 3   KKGLLIVISGPSGAGKGTIC---KELLKKEDLWVSVSATTRSPRKGEENG-VHYFFLNKD 58

Query: 59  VDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 E +  +  A    ++    ++ +   +  G  ++                    
Sbjct: 59  EFNERIEEDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVI-------------------- 98

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L +D    + V+E  P+   I  LP   +    R+ NR S      +  F          
Sbjct: 99  LEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRF---------- 148

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  + +I         +V+   + +     + +I+
Sbjct: 149 -KAAYKEINYVSKYNYAVVN--DTVEDAVNKVRSII 181


>gi|254362795|ref|ZP_04978876.1| adenylate kinase [Mannheimia haemolytica PHL213]
 gi|153094424|gb|EDN75272.1| adenylate kinase [Mannheimia haemolytica PHL213]
          Length = 214

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 71/230 (30%), Gaps = 55/230 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    +             T         +  R  +      E G +A+A++
Sbjct: 7   GAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKES--TELGKQAKALM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                   V + +  AL++ +I   D    + +   G   +      D+L+E     V  
Sbjct: 54  ---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKE---SGVKI 103

Query: 131 DCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD----- 166
           D  +  D+  ++ ++R+  R                       +    D   R+D     
Sbjct: 104 DLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDDKPET 163

Query: 167 -----VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                 + H++ +     +   A     R   +D     + V+  +  I+
Sbjct: 164 VLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 213


>gi|83940988|gb|ABC48893.1| hypothetical protein [Enterococcus faecium]
          Length = 234

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T + LL   L+    +V    +P           ++ S  +       E ++
Sbjct: 37  GPNGAGKSTTMKLLCGLLKPSEGEVIFKGKPWSRDTLNKIGVLIESPAIYGNLTAKENML 96

Query: 71  FAAARLDHVENVIRPALM 88
             A  L   EN I   L 
Sbjct: 97  IHACMLGVSENEITRVLK 114


>gi|24375220|ref|NP_719263.1| adenylylsulfate kinase [Shewanella oneidensis MR-1]
 gi|29336675|sp|Q8EB13|CYSC_SHEON RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|24350011|gb|AAN56707.1|AE015806_2 adenylylsulfate kinase [Shewanella oneidensis MR-1]
          Length = 205

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+R L    +  +                 LL       G   + 
Sbjct: 29  FTGLSGAGKSTLAGALERALFEAGFHTY-----------------LLDGDNVRHGLCKDL 71

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 72  GFSVADRDENLRRVGEVAKLMVDAGLVVLS 101


>gi|260063772|ref|YP_003196852.1| Deoxynucleoside kinase subfamily [Robiginitalea biformata HTCC2501]
 gi|88783217|gb|EAR14390.1| Deoxynucleoside kinase subfamily, putative [Robiginitalea biformata
           HTCC2501]
          Length = 275

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 65/200 (32%), Gaps = 30/200 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N  + I+  G  GAGKTT   LL +  Q                  +   +  L     +
Sbjct: 69  NKRMHIAVAGNIGAGKTTLTKLLSKHYQ------------WDAHFEDVVDNPYLDDFYTQ 116

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQH 114
              E  +       L+     I      GK ++ DR  + D+     +    G   +   
Sbjct: 117 M--ERWSFNLQIYFLNSRYRQILRIRESGKDVIQDRTIYEDAHIFAPNLHAMGLMTNRDF 174

Query: 115 LFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
               SL E+    VM PD  I L   +   + ++ NR    E++         +    + 
Sbjct: 175 QNYTSLFELMETLVMPPDLMIYLRSSIPNLVNQIHNRGREYENSI-------SIDYLSRL 227

Query: 174 RQIFLDIARN-QPDRCHIVD 192
            + +     + +  +  I+D
Sbjct: 228 NERYEAWVHSYEKGKLLIID 247


>gi|116511319|ref|YP_808535.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris SK11]
 gi|116106973|gb|ABJ72113.1| Deoxynucleoside kinase [Lactococcus lactis subsp. cremoris SK11]
          Length = 217

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 28/160 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK++   +L   L+ +                                 +  A +   
Sbjct: 11  GAGKSSLTEMLAEELKTQ----AFYESVDDNKVLPLFYE----------NPQKYAFLLQI 56

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSLQEISVQE 127
             L+   + I+ AL +   +L DR  + DS      A  G  D ++    D L +  ++E
Sbjct: 57  YFLNKRFDSIKRALSDNNNVL-DRSIYEDSLLFHLNADLGRADETEVEVYDDLLKNMLEE 115

Query: 128 V-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +        PD  I + +  D  L+R++ R    E    D
Sbjct: 116 IDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYD 155


>gi|320355197|ref|YP_004196536.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
 gi|320123699|gb|ADW19245.1| ABC transporter related protein [Desulfobulbus propionicus DSM
          2032]
          Length = 415

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            G FIS  G  GAGKTT +  L R L
Sbjct: 32 RPGEFISLLGPNGAGKTTLLRTLSRHL 58


>gi|313676007|ref|YP_004054003.1| ABC transporter related protein [Marivirga tractuosa DSM 4126]
 gi|312942705|gb|ADR21895.1| ABC transporter related protein [Marivirga tractuosa DSM 4126]
          Length = 253

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLL 55
           G FI+  G  G GK+T I  L    +     + +  R      + E AR + L
Sbjct: 36 KGKFIALLGANGVGKSTLIRTLANLQKPLFGKILLAKRNINEYDSKELARQISL 89


>gi|291459577|ref|ZP_06598967.1| guanylate kinase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417855|gb|EFE91574.1| guanylate kinase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 214

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 26/168 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  GL +   G  GAGK T +  L          +   TR P     +      +     
Sbjct: 2   MEKGLLVVVSGFSGAGKGTIMRRLMERYDGYALSISATTRAPRPGERSGREYFFVDKDCF 61

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +E     E + +A                  K +  D +  +  A+  E+       +  
Sbjct: 62  EEMIDRDELVEYA------------------KYV--DHYYGTPRAFVEEKREEGKDVILE 101

Query: 120 LQ---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           ++    + +++  PD  ++   P   +    R+  R +   SA     
Sbjct: 102 IEIQGALKIKQKFPDAILVFLTPPSAEELRSRLIGRGTEELSAVHRRL 149


>gi|288553686|ref|YP_003425621.1| hypothetical protein BpOF4_03315 [Bacillus pseudofirmus OF4]
 gi|288544846|gb|ADC48729.1| hypothetical protein BpOF4_03315 [Bacillus pseudofirmus OF4]
          Length = 199

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 70/225 (31%), Gaps = 43/225 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------VTREPG----GTPAAEAARHV 53
           + I   G   +GK+T  +    +L    Y +           EPG         +  R +
Sbjct: 1   MLIGLTGGIASGKSTVSN----WLSEHGYPIIDADKIARDVVEPGMGAYEAIVGQFGREI 56

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA----YQGER 109
           L   G          I     +   +  ++ PA+                A    Y+ E 
Sbjct: 57  LFEDGTINRKKLGSIIFKDEKKRSELNQIVHPAVRR-----------EMLAQKGRYEAEG 105

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
             +    +  L E ++  ++ D  +++ +     L R+ +R              +  + 
Sbjct: 106 HETIIFDIPLLFESNLFHLV-DRVMLVYVDKQTQLNRLLDRDQAGSEDAKARIASQLPLE 164

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +K R  +            I+D++ S +     + N++    ++
Sbjct: 165 DKKSRADY------------IIDNSGSLEETFQQLQNVIQHWSKE 197


>gi|255655477|ref|ZP_05400886.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-23m63]
 gi|296451469|ref|ZP_06893206.1| macrolide export ATP-binding/permease MacB [Clostridium difficile
          NAP08]
 gi|296880182|ref|ZP_06904148.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Clostridium difficile NAP07]
 gi|296259736|gb|EFH06594.1| macrolide export ATP-binding/permease MacB [Clostridium difficile
          NAP08]
 gi|296428771|gb|EFH14652.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Clostridium difficile NAP07]
          Length = 225

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G FI+  G  G+GK+T + LL
Sbjct: 32 KGTFIAITGPSGSGKSTLLHLL 53


>gi|225018702|ref|ZP_03707894.1| hypothetical protein CLOSTMETH_02652 [Clostridium methylpentosum
          DSM 5476]
 gi|224948430|gb|EEG29639.1| hypothetical protein CLOSTMETH_02652 [Clostridium methylpentosum
          DSM 5476]
          Length = 203

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR 26
          MN GL I   G  G+GK T   ++  
Sbjct: 1  MNKGLLIVLSGPSGSGKGTINQVIAE 26


>gi|194467162|ref|ZP_03073149.1| ABC transporter related [Lactobacillus reuteri 100-23]
 gi|194454198|gb|EDX43095.1| ABC transporter related [Lactobacillus reuteri 100-23]
          Length = 460

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G+ G+GK+T + L+   L +   ++       P         +  L+   +D    E E 
Sbjct: 36  GVSGSGKSTILKLIAGLLPKYGGEIVAGAVDVPTDAQIGMVFQDPLMQFALDTPRHELEF 95

Query: 69  IVFAAAR-LDHVENVIRPALMEGKI 92
            +       D +   ++ AL  GK+
Sbjct: 96  TLENCQVPTDKIPEHVKEALRFGKV 120


>gi|77919531|ref|YP_357346.1| hypothetical protein Pcar_1935 [Pelobacter carbinolicus DSM 2380]
 gi|119391290|sp|Q3A381|Y1935_PELCD RecName: Full=UPF0042 nucleotide-binding protein Pcar_1935
 gi|77545614|gb|ABA89176.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 288

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 4/36 (11%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          M     I   G+ G+GKTT        L+ + + V 
Sbjct: 1  MKRARLIIITGLSGSGKTTAARA----LEDEGFFVV 32


>gi|330980008|gb|EGH78274.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 369

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+
Sbjct: 295 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQ 349


>gi|329124050|ref|ZP_08252597.1| cytidylate kinase 2 [Haemophilus aegyptius ATCC 11116]
 gi|327467475|gb|EGF12973.1| cytidylate kinase 2 [Haemophilus aegyptius ATCC 11116]
          Length = 31

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T   +L   L
Sbjct: 2  GMIITVDGPSGAGKGTLCYVLAEKL 26


>gi|229013583|ref|ZP_04170716.1| Iron compound ABC transporter, ATP-binding protein [Bacillus
           mycoides DSM 2048]
 gi|229062063|ref|ZP_04199388.1| Iron compound ABC transporter, ATP-binding protein [Bacillus cereus
           AH603]
 gi|229135190|ref|ZP_04263989.1| Iron compound ABC transporter, ATP-binding protein [Bacillus cereus
           BDRD-ST196]
 gi|228648232|gb|EEL04268.1| Iron compound ABC transporter, ATP-binding protein [Bacillus cereus
           BDRD-ST196]
 gi|228717215|gb|EEL68890.1| Iron compound ABC transporter, ATP-binding protein [Bacillus cereus
           AH603]
 gi|228747743|gb|EEL97613.1| Iron compound ABC transporter, ATP-binding protein [Bacillus
           mycoides DSM 2048]
          Length = 256

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHV-LLSCG 58
           + +G  +S  G  G+GK+T + L+ R L++   D+ +  E   T  +A+ A+ + +L   
Sbjct: 8   IKAGEIVSLIGPNGSGKSTLLRLIARLLKQSEGDIILDGENIYTMKSADVAKQLAMLPQM 67

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
            D         +    R  H     R    + +I+
Sbjct: 68  HDHQLDLTVKELIEFGRGPHKSWSSRLNKEDEEIV 102


>gi|219118050|ref|XP_002179808.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408861|gb|EEC48794.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 900

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 28/154 (18%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G  GAGKTT  + L+  L +     V+                  L       G   +  
Sbjct: 3   GCSGAGKTTIATALEDQLVKSYGKHVYR-----------------LDGDNLRTGLNRDLG 45

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
              A R + V          G+  L   F D+         S      D++++  V + +
Sbjct: 46  FSEADRAESVRRT-------GE--LATLFADAGVVTLVGLISPYRKDRDAVRKRHVDQGI 96

Query: 130 PDCTIILDLPVDIGLKR-VQNRYSLRESACLDYF 162
           P   + LD+PVD   KR  + +Y+  ES  L +F
Sbjct: 97  PFYEVFLDVPVDELKKRDPKGQYARVESGELKHF 130


>gi|169840443|ref|ZP_02873631.1| Cytidylate kinase [candidate division TM7 single-cell isolate
          TM7a]
          Length = 60

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query: 5  LFISFEGIEGAGKTTHISLLKR 26
          + I+ +G  G+GK+T   L+ +
Sbjct: 1  MIIAIDGPAGSGKSTIAKLVAK 22


>gi|170717702|ref|YP_001784775.1| cytidylate kinase [Haemophilus somnus 2336]
 gi|168825831|gb|ACA31202.1| cytidylate kinase [Haemophilus somnus 2336]
          Length = 237

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          MN  L I+ +G  GAGK T    L   L
Sbjct: 1  MNKNLIITVDGPSGAGKGTLCYALAEKL 28


>gi|167750631|ref|ZP_02422758.1| hypothetical protein EUBSIR_01608 [Eubacterium siraeum DSM 15702]
 gi|167656310|gb|EDS00440.1| hypothetical protein EUBSIR_01608 [Eubacterium siraeum DSM 15702]
          Length = 260

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          +  G FIS  G  G GK+T + ++   L   + +V V 
Sbjct: 37 IQKGEFISLLGPSGCGKSTLLRIVSDLLTPTSGEVTVC 74


>gi|146421433|ref|XP_001486662.1| hypothetical protein PGUG_00039 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146387783|gb|EDK35941.1| hypothetical protein PGUG_00039 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 282

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 25/113 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--------AEAARHVLLSC 57
            ++F G+  +GKT     L   LQ++  +   T+EPG   +           ++ V    
Sbjct: 3   LVTFTGLPSSGKTKFAKQLVDSLQKRIEESKTTKEPGHNYSVIYHSDETLGISKDVYKDS 62

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
             ++     +    +A         ++  L    I++ D     + AY     
Sbjct: 63  TQEKHARGTQ---MSA---------VKRDLARNTIVVLD-----TMAYIKGFR 98


>gi|119511461|ref|ZP_01630572.1| ABC transporter-like protein [Nodularia spumigena CCY9414]
 gi|119463926|gb|EAW44852.1| ABC transporter-like protein [Nodularia spumigena CCY9414]
          Length = 204

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 5  LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHV 53
          LFI+  G  G+GK+T + LL  + L  +  DV V      T   +    +
Sbjct: 10 LFIT--GPSGSGKSTLLKLLYGQELPTQG-DVIVDDYNVKTLRGDRLSRL 56


>gi|152994724|ref|YP_001339559.1| ABC transporter-like protein [Marinomonas sp. MWYL1]
 gi|150835648|gb|ABR69624.1| ABC transporter related [Marinomonas sp. MWYL1]
          Length = 255

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G  I+  G  G GK+T +  + R L      VH 
Sbjct: 28 GKIIALLGPNGCGKSTLLKAMARILSPMEGKVHW 61


>gi|115443222|ref|XP_001218418.1| lipid A export ATP-binding/permease protein msbA [Aspergillus terreus
            NIH2624]
 gi|114188287|gb|EAU29987.1| lipid A export ATP-binding/permease protein msbA [Aspergillus terreus
            NIH2624]
          Length = 1305

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/25 (60%), Positives = 19/25 (76%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRF 27
            SG F++F G  G GKTT ISLL++F
Sbjct: 1080 SGQFVAFVGPSGCGKTTVISLLEKF 1104


>gi|113461120|ref|YP_719188.1| cytidylate kinase [Haemophilus somnus 129PT]
 gi|112823163|gb|ABI25252.1| cytidylate kinase [Haemophilus somnus 129PT]
          Length = 237

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          MN  L I+ +G  GAGK T    L   L
Sbjct: 1  MNKNLIITVDGPSGAGKGTLCYALAEKL 28


>gi|163939597|ref|YP_001644481.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
 gi|229058436|ref|ZP_04196820.1| ABC transporter ATP-binding protein [Bacillus cereus AH603]
 gi|229166647|ref|ZP_04294399.1| ABC transporter ATP-binding protein [Bacillus cereus AH621]
 gi|163861794|gb|ABY42853.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
 gi|228616901|gb|EEK73974.1| ABC transporter ATP-binding protein [Bacillus cereus AH621]
 gi|228719945|gb|EEL71535.1| ABC transporter ATP-binding protein [Bacillus cereus AH603]
          Length = 330

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKKGEFTTLLGPSGCGKTTLLRMIA 49


>gi|323173770|gb|EFZ59399.1| hypothetical protein ECLT68_2088 [Escherichia coli LT-68]
          Length = 232

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|320108375|ref|YP_004183965.1| adenylate kinase [Terriglobus saanensis SP1PR4]
 gi|319926896|gb|ADV83971.1| adenylate kinase [Terriglobus saanensis SP1PR4]
          Length = 236

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 25/71 (35%), Gaps = 12/71 (16%)

Query: 147 VQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203
           ++ R    E    +       + H +     + +  +      R  +VD     ++V  +
Sbjct: 175 LEQRADDTEEKFAERM----KVFHAQTAPVIEHYRTL-----GRFEVVDGDREVEAVTGD 225

Query: 204 ILNIVWELVQK 214
           I+  +  L +K
Sbjct: 226 IVAAIARLRKK 236


>gi|297280589|ref|XP_002801936.1| PREDICTED: guanylate kinase [Macaca mulatta]
          Length = 263

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 37/169 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LLKR LQ       + V H TR P              
Sbjct: 67  MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 113

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             G D +    E +     R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 114 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRIC 164

Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESA 157
            LD     ++ I   ++ P   I + + P    +  +R++ R +  E +
Sbjct: 165 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEES 210


>gi|291565744|dbj|BAI88016.1| adenylylsulfate kinase [Arthrospira platensis NIES-39]
          Length = 177

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYD 34
          F G+ GAGKTT    +   L+ + Y 
Sbjct: 10 FTGLSGAGKTTISQAVAEKLKSQGYK 35


>gi|302662567|ref|XP_003022936.1| ABC multidrug transporter, putative [Trichophyton verrucosum HKI
            0517]
 gi|291186909|gb|EFE42318.1| ABC multidrug transporter, putative [Trichophyton verrucosum HKI
            0517]
          Length = 1306

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/24 (54%), Positives = 17/24 (70%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRF 27
            G F++F G  G GK+T I+LL RF
Sbjct: 1085 GKFVAFVGPSGCGKSTMINLLCRF 1108


>gi|291165644|gb|EFE27693.1| dethiobiotin synthase [Filifactor alocis ATCC 35896]
          Length = 225

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M+ G+F++  G +  GKT   +LL + ++   YDV
Sbjct: 1  MSKGIFVTGTGTD-VGKTYVTALLAKKMREYGYDV 34


>gi|284052906|ref|ZP_06383116.1| adenylylsulfate kinase [Arthrospira platensis str. Paraca]
          Length = 177

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYD 34
          F G+ GAGKTT    +   L+ + Y 
Sbjct: 10 FTGLSGAGKTTISQAVAEKLKSQGYK 35


>gi|229011079|ref|ZP_04168273.1| ABC transporter ATP-binding protein [Bacillus mycoides DSM 2048]
 gi|228750251|gb|EEM00083.1| ABC transporter ATP-binding protein [Bacillus mycoides DSM 2048]
          Length = 330

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKKGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229169110|ref|ZP_04296825.1| Iron compound ABC transporter, ATP-binding protein [Bacillus cereus
           AH621]
 gi|228614338|gb|EEK71448.1| Iron compound ABC transporter, ATP-binding protein [Bacillus cereus
           AH621]
          Length = 256

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHV-LLSCG 58
           + +G  +S  G  G+GK+T + L+ R L++   D+ +  E   T  +A+ A+ + +L   
Sbjct: 8   IKAGEIVSLIGPNGSGKSTLLRLIARLLKQSEGDIILDGENIYTMKSADVAKQLAMLPQM 67

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
            D         +    R  H     R    + +I+
Sbjct: 68  HDHQLDLTVKELIEFGRGPHKSWSSRLNKEDEEIV 102


>gi|227550324|ref|ZP_03980373.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus faecium TX1330]
 gi|227180526|gb|EEI61498.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus faecium TX1330]
          Length = 241

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N G  I F G  G+GK+T + L+   L
Sbjct: 53 NKGEVIVFSGPSGSGKSTLLKLIGTLL 79


>gi|226312028|ref|YP_002771922.1| cytidylate kinase [Brevibacillus brevis NBRC 100599]
 gi|226094976|dbj|BAH43418.1| cytidylate kinase [Brevibacillus brevis NBRC 100599]
          Length = 223

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 74/231 (32%), Gaps = 43/231 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           I+ +G  GAGK+T    +   L+    D                R +  +    +     
Sbjct: 3   IAIDGPAGAGKSTVAQKVAGQLEYVYID-----------TGAMYRALAWAVHHHQLPISD 51

Query: 64  AEAEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLFL 117
               + +    ++  V EN  +        +    ++ S+   Q         S +   L
Sbjct: 52  ESTVSELLQKNKVQLVRENGQQHVYWNEIDVTS--WIRSTEVSQYASIVASYGSVREQML 109

Query: 118 DSLQEISVQE------------VMP--DCTIILDLPVDIGLKRVQNRYS--LRESACLDY 161
              + ++ Q             V+P  D  I L   +    +R + R+   L +    D 
Sbjct: 110 VLQRRLATQGNVVMDGRDIGTHVLPDADVKIFLTASI---QERAERRWKELLAKGTQTDL 166

Query: 162 FERKDVMIHEKRRQIFLDIA-RNQPDRCHIVDSAH-SFQSVATNILNIVWE 210
            E +  +    RR +  ++A   Q +   +VD+   +   V   IL I   
Sbjct: 167 AELEKEIEERDRRDMQREVAPLRQAEDAVLVDTTGMTIDQVVDRILQICER 217


>gi|206970717|ref|ZP_03231669.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1134]
 gi|206734353|gb|EDZ51523.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1134]
          Length = 330

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKKGEFTTLLGPSGCGKTTLLRMIA 49


>gi|153806121|ref|ZP_01958789.1| hypothetical protein BACCAC_00376 [Bacteroides caccae ATCC 43185]
 gi|149130798|gb|EDM22004.1| hypothetical protein BACCAC_00376 [Bacteroides caccae ATCC 43185]
          Length = 463

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|115696448|ref|XP_001197508.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 453

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 5   LF---ISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLS--- 56
           +F   I+  G  G+GKT+ +++++   Q       V V+R  G T  +    +V+LS   
Sbjct: 126 MFRKPIAIHGPSGSGKTSIMAMVQENAQMHLGRPCVVVSRFLGTTSQSSTIINVILSIAQ 185

Query: 57  --CGVDEFGAEAEAI 69
             C   +    +E I
Sbjct: 186 QICAAFQIHDNSELI 200


>gi|114777431|ref|ZP_01452428.1| Signal recognition particle GTPase [Mariprofundus ferrooxydans
           PV-1]
 gi|114552213|gb|EAU54715.1| Signal recognition particle GTPase [Mariprofundus ferrooxydans
           PV-1]
          Length = 451

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++GAGKTT    L + L  +   V +T      PAA     VL
Sbjct: 106 GLQGAGKTTTAGKLAKLLASQGKKVALTSVDATRPAAREQLQVL 149


>gi|108763420|ref|YP_633013.1| signal recognition particle protein [Myxococcus xanthus DK 1622]
 gi|108467300|gb|ABF92485.1| signal recognition particle protein [Myxococcus xanthus DK 1622]
          Length = 548

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 50/160 (31%), Gaps = 31/160 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------AAEAARHVLLSCGVDEF 62
           G++G+GKTT    L   L ++     +       P          E  +  +      + 
Sbjct: 118 GLQGSGKTTTTGKLASRLLQEGRKPLLVAADIYRPAAVDQLKVLGERLKVPVYHEPGIQP 177

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              A+   +AAAR             +  ++L D            R +     +  L+ 
Sbjct: 178 PELAKRG-YAAAREQ-----------KCDVVLID---------TAGRLAIDESLMAELES 216

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           I    V PD  I+L     IG   V+          LD F
Sbjct: 217 I-KGNVQPD-NILLVCDAMIGQDAVRTAAEFDRRLTLDGF 254


>gi|22001676|sp|Q98RC0|KCY_MYCPU RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
          Length = 221

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M   + I+ +G  G GK+T    L   L 
Sbjct: 1  MTKNINIAIDGPSGVGKSTIAKKLADHLN 29


>gi|85113113|ref|XP_964468.1| uridylate kinase [Neurospora crassa OR74A]
 gi|28926251|gb|EAA35232.1| uridylate kinase [Neurospora crassa OR74A]
          Length = 225

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 57/220 (25%), Gaps = 45/220 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  + L R      L      +   ++  G+   +  R  + +  +      
Sbjct: 37  GGPGAGKGTQCARLVRDYGFTHLSA-GDLLRAEQDRPGSQYGQLIRDCIKNGAIVPM-EV 94

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A++  A R   V    +            RFL       G             +E+  
Sbjct: 95  TVALLENAMRDTLVSGKTKTG----------RFLID-----GFPRKMDQAV--KFEEVVC 137

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182
              M    +  D P     KR+  R         +          E  R+ F        
Sbjct: 138 PAKM---VLFYDCPEQEMEKRLLERGKTSGREDDNA---------ESIRKRFRTFVETSM 185

Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
                  +  +   VDS    + V       +  +   + 
Sbjct: 186 PVVDHYEREGKVVKVDSTPGPEKVYEETRKQLRRVFGDKF 225


>gi|327401866|ref|YP_004342705.1| PilT protein domain-containing protein [Archaeoglobus veneficus
           SNP6]
 gi|327317374|gb|AEA47990.1| PilT protein domain protein [Archaeoglobus veneficus SNP6]
          Length = 590

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I+  G  GAGK+T  + +  FL    + V     P      +       +    E
Sbjct: 259 QRGILIA--GPPGAGKSTFAASVADFLLSHGFMVKTMESPRDLMVRDEITQY--APLEGE 314

Query: 62  FGAEAEAIVF 71
               A+ ++ 
Sbjct: 315 MRLTADILLL 324


>gi|288926714|ref|ZP_06420626.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|288336502|gb|EFC74876.1| conserved hypothetical protein [Prevotella buccae D17]
          Length = 201

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)

Query: 5  LFISFEGIEGAGKTTHISLL--KRFLQRKNY 33
          + I   G  G+GKTT  S +    +L+   Y
Sbjct: 1  MLIVIAGPNGSGKTTITSKILHHEWLEDAVY 31


>gi|284042825|ref|YP_003393165.1| adenylate kinase [Conexibacter woesei DSM 14684]
 gi|283947046|gb|ADB49790.1| adenylate kinase [Conexibacter woesei DSM 14684]
          Length = 224

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 71/236 (30%), Gaps = 53/236 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I F G  GAGK T  + L+   +                  +  R  +      E G  
Sbjct: 6   LILF-GPPGAGKGTQAARLQDDFR-----------LPYVATGDILRAAVKDG--TELGRA 51

Query: 66  AEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           A+A + A   +  + V ++I   +        D F+   +     +  +     D L   
Sbjct: 52  AKAYMDAGDLVPDELVIDLIVERISADDS--RDGFILDGFPRNRAQADALGEAFDRLGRR 109

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL------------------DYFERK 165
                     +++D+P D  ++R+  R    ++                         ++
Sbjct: 110 ITA------VLLIDVPDDDLVRRITGRRVSAKTGRPYHVETDPPKHEGRCDIDGSRLIQR 163

Query: 166 DVMIHEKRRQIFLDIARNQPDRC----------HIVDSAHSFQSVATNILNIVWEL 211
           D    +  R+  L++   + +              VD   S   V  +I  ++  L
Sbjct: 164 DDDRPDVVRKR-LEVYHRETEPLISYYDDKGLLRRVDGTRSPTEVHDHIRAVLATL 218


>gi|254779392|ref|YP_003057497.1| adenylate kinase [Helicobacter pylori B38]
 gi|254001303|emb|CAX29284.1| Adenylate kinase [Helicobacter pylori B38]
          Length = 191

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 44/222 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+     + N +       G    AE+A+       ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR---- 174
           +  E+ ++ V         + V +     + R   R     D    + V  H + R    
Sbjct: 105 AQNEVILKSV---------IEVKVSENTAKERVLGRSRGADD---NEKV-FHNRMRVFLD 151

Query: 175 -----QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                Q F            I++   S + +   +   +   
Sbjct: 152 PLGEIQNFYKAKHLH----KIINGERSIEEIVNEMQKYILSF 189


>gi|253684212|gb|ACT33325.1| putative adenylate kinase [uncultured Sinorhizobium sp.]
          Length = 192

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 61/210 (29%), Gaps = 33/210 (15%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T   LL     R       T         +  R  +      E G  A+A
Sbjct: 5   FLGPPGAGKGTQAKLLTE---RYGIPQLST--------GDMLRAAV--AQATEVGKRAKA 51

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISV 125
           ++        V + I         ++ DR      A     D        ++   + +  
Sbjct: 52  VM---DAGQLVSDEIVNE------IVSDRIDQPDCAKGFILDGYPRTVPQAIALGKMLEG 102

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
           + +  D  I L +     +KR++NR      +      +        +  + + +     
Sbjct: 103 KGLKLDAVIELKVDEAALVKRMENRVAETIAAGGTVRSDDNPEAFKRRLTE-YREKTAPL 161

Query: 185 PDRC------HIVDSAHSFQSVATNILNIV 208
            +          VD      +V   I  I+
Sbjct: 162 SEHYAGTGQLRTVDGMAEVNTVTAEIEKIL 191


>gi|238893280|ref|YP_002918014.1| glutamate/aspartate transport system ATP-binding component
          [Klebsiella pneumoniae NTUH-K2044]
 gi|238545596|dbj|BAH61947.1| glutamate/aspartate transport system ATP-binding component
          [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 272

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P    +  A R +
Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLSGGEILIDGKPTSRLSGSALRQL 98


>gi|242310360|ref|ZP_04809515.1| signal recognition particle protein [Helicobacter pullorum MIT
           98-5489]
 gi|239522758|gb|EEQ62624.1| signal recognition particle protein [Helicobacter pullorum MIT
           98-5489]
          Length = 294

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            I   G+ GAGKTT I+ L    Q++   V +    G T  A A   + L   
Sbjct: 92  LIV--GVNGAGKTTTIAKLANLYQKQGKSVIL--GAGDTFRAAAIEQLSLWGE 140


>gi|218661671|ref|ZP_03517601.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli IE4771]
          Length = 138

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG F+S  G  G+GK+T + LL + L+
Sbjct: 30 SGEFVSIVGPSGSGKSTVLRLLTQALR 56


>gi|168057840|ref|XP_001780920.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667633|gb|EDQ54258.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 633

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I F G+ G GK+T+++ +  +LQ+ +  V
Sbjct: 429 IVFVGVNGVGKSTNLAKVAYWLQQHDIKV 457


>gi|149915279|ref|ZP_01903807.1| hypothetical protein RAZWK3B_15618 [Roseobacter sp. AzwK-3b]
 gi|149811000|gb|EDM70839.1| hypothetical protein RAZWK3B_15618 [Roseobacter sp. AzwK-3b]
          Length = 289

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
           I FEG + AGK   I   + +L  +   V    +P    +++ 
Sbjct: 76  IVFEGRDAAGKGGTIKRFREYLNPRGARVVALSKPSDVESSQW 118


>gi|26249553|ref|NP_755593.1| ATP-binding protein yghS [Escherichia coli CFT073]
 gi|26109961|gb|AAN82166.1|AE016766_254 Hypothetical ATP-binding protein yghS [Escherichia coli CFT073]
          Length = 237

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|326331226|ref|ZP_08197520.1| 4-amino-4-deoxychorismate synthase, component I [Nocardioidaceae
          bacterium Broad-1]
 gi|325950996|gb|EGD43042.1| 4-amino-4-deoxychorismate synthase, component I [Nocardioidaceae
          bacterium Broad-1]
          Length = 166

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKR 26
          G  I  +G  G+GKTT  S L  
Sbjct: 10 GRLICVDGPAGSGKTTLASALAE 32


>gi|317179447|dbj|BAJ57235.1| shikimate kinase [Helicobacter pylori F30]
          Length = 159

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 8   GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVRGIFEELGEDNFR------MFEK 58

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 59  NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 91

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 92  FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 143

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 144 RGGLNNSLKQVLQFI 158


>gi|311281176|ref|YP_003943407.1| ABC transporter related protein [Enterobacter cloacae SCF1]
 gi|308750371|gb|ADO50123.1| ABC transporter related protein [Enterobacter cloacae SCF1]
          Length = 355

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 9/46 (19%)

Query: 4  GLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          G F+   G  G GK+T + LL           +L+ +N      RE
Sbjct: 27 GEFVVLVGPSGCGKSTLLRLLAGLDEVSGGEIWLREENITTMTPRE 72


>gi|291235386|ref|XP_002737625.1| PREDICTED: adenylate kinase domain containing 1-like, partial
           [Saccoglossus kowalevskii]
          Length = 555

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 23/151 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           FI   G  GAGKT+    L +  + +     ++ +      T        +LL       
Sbjct: 18  FIVV-GKPGAGKTSLAKRLAQNWKCELVSPTELILQNMDLETDIGNKVSEILLRGEALPE 76

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                     A  ++  E +  P +     +L D F                  +D L+ 
Sbjct: 77  E-------MVAKMIE--EKINSPEVAHHGYVL-DGF--------PSLCEDYMRVVDQLEL 118

Query: 123 ISVQEVMPDCTIILDLPV-DIGLKRVQNRYS 152
           +   ++ PD  I L +P  D+  +R   R  
Sbjct: 119 VKNWKLKPDFIINLKIPDNDLAARRTGQRVD 149


>gi|317052515|ref|YP_004113631.1| LAO/AO transporter ATPase [Desulfurispirillum indicum S5]
 gi|316947599|gb|ADU67075.1| LAO/AO transport system ATPase [Desulfurispirillum indicum S5]
          Length = 324

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I   G+ GAGK+T I     +L ++   V  +  +P     GG+   +  R  LLS   +
Sbjct: 53  IGISGVPGAGKSTFIEAFGMYLLQQGKKVAVLAVDPSSQISGGSILGDKTRMELLSRETN 112

Query: 61  EF 62
            F
Sbjct: 113 AF 114


>gi|320007361|gb|ADW02211.1| ABC transporter transmembrane region [Streptomyces flavogriseus
           ATCC 33331]
          Length = 629

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 7/90 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGV 59
           G  ++  G  GAGK+T   LL R        V +     R+       E    V     +
Sbjct: 407 GRMVALVGSSGAGKSTIAQLLPRLYDADAGAVRLNGVDVRDLTADSIRETMGMVTQDGHL 466

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALME 89
                 A  ++   AR +  E  I  AL  
Sbjct: 467 FHESVRANLLL---ARPEATEEEIWDALRR 493


>gi|262042356|ref|ZP_06015518.1| glutamate ABC superfamily ATP binding cassette transporter, ABC
          protein [Klebsiella pneumoniae subsp. rhinoscleromatis
          ATCC 13884]
 gi|259040264|gb|EEW41373.1| glutamate ABC superfamily ATP binding cassette transporter, ABC
          protein [Klebsiella pneumoniae subsp. rhinoscleromatis
          ATCC 13884]
          Length = 272

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P    +  A R +
Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLSGGEILIDGKPTSRLSGSALRQL 98


>gi|297724583|ref|NP_001174655.1| Os06g0203500 [Oryza sativa Japonica Group]
 gi|255676818|dbj|BAH93383.1| Os06g0203500 [Oryza sativa Japonica Group]
          Length = 99

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/84 (10%), Positives = 26/84 (30%), Gaps = 8/84 (9%)

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARN 183
            + P+  +  D   +   +R+  R   R    ++   ++  +  E      + +      
Sbjct: 16  SISPEFVLFFDCSEEEMERRLLGRNQGRSDDNIETIRKRLKVFVESSLPVIEYY-----E 70

Query: 184 QPDRCHIVDSAHSFQSVATNILNI 207
                  +D+      V  ++  I
Sbjct: 71  SKGMVKKIDATKPAPEVFEDVKAI 94


>gi|299821535|ref|ZP_07053423.1| multidrug resistance ABC transporter permease protein [Listeria
           grayi DSM 20601]
 gi|299817200|gb|EFI84436.1| multidrug resistance ABC transporter permease protein [Listeria
           grayi DSM 20601]
          Length = 590

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           ++ G  ++  G  G+GKTT ++LL RF       +            +  R + L 
Sbjct: 374 LDKGKMVAIVGPTGSGKTTIMNLLNRFYNVDGGAILF--------DGKDIRDIELH 421


>gi|229179940|ref|ZP_04307286.1| hypothetical protein bcere0005_32870 [Bacillus cereus 172560W]
 gi|228603621|gb|EEK61096.1| hypothetical protein bcere0005_32870 [Bacillus cereus 172560W]
          Length = 195

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 8   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 57  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L ++  +    D    LD+
Sbjct: 113 ELYKL--RACRSDVIFYLDV 130


>gi|296125741|ref|YP_003632993.1| cytidylate kinase [Brachyspira murdochii DSM 12563]
 gi|296017557|gb|ADG70794.1| cytidylate kinase [Brachyspira murdochii DSM 12563]
          Length = 223

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 52/232 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T   L  + L  K  D        G        +++      +   E 
Sbjct: 8   ITLDGPSGAGKSTIAKLTAKKLSFKYLD-------TGAMYRAVTLYMIKHNINTDNNDEV 60

Query: 67  EAIVF-------AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            + +         A R+      +   +   +++        +   +    S+    + S
Sbjct: 61  ISALNNLNISFDNAGRIYLDNEDVTEEIRSSEVV--------NLVSKVSSISAVRQNMVS 112

Query: 120 LQE-ISVQE------------VMPDC--TIILDLPVDIGLKRVQNRYSLR--ESACLDYF 162
           LQ  I+               V P+      +D  +D   +R + RY+    +   L Y 
Sbjct: 113 LQRKIAEGGNYVVDGRDIGSIVFPNAKYKFYMDASLD---ERARRRYNEELSKGKTLTYE 169

Query: 163 E-RKDVMIHEKRRQIFLDIARNQ----PDRCHIVD-SAHSFQSVATNILNIV 208
           E R+ +    ++R  F    ++     P+  +I+D ++ +   VA  I N+V
Sbjct: 170 EVRESI----RKRDEFDSNRKDSPLVVPNNAYIIDTTSMTIDEVAEKITNVV 217


>gi|222109068|ref|YP_002551334.1| replication protein A [Agrobacterium radiobacter K84]
 gi|221727990|gb|ACM31040.1| replication protein A [Agrobacterium radiobacter K84]
          Length = 411

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  + Y V           +     +      D    E    ++AA
Sbjct: 138 GSGKTTTSAHLAQYLALQGYRVLAVDLDPQASLSALLGVL---PETDVGANET---LYAA 191

Query: 74  ARLDH----VENVIRPALMEGKILL 94
            R D     + +VIRP   +G  L+
Sbjct: 192 IRYDETRRPLRDVIRPTYFDGLHLV 216


>gi|190606495|ref|YP_001974780.1| putative ATPase [Enterococcus faecium]
 gi|190350265|emb|CAP62614.1| putative ATPase [Enterococcus faecium]
          Length = 241

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N G  I F G  G+GK+T + L+   L
Sbjct: 53 NKGEVIVFSGPSGSGKSTLLKLIGTLL 79


>gi|73670159|ref|YP_306174.1| multidrug resistance ABC transporter [Methanosarcina barkeri str.
           Fusaro]
 gi|72397321|gb|AAZ71594.1| multidrug resistance ABC transporter [Methanosarcina barkeri str.
           Fusaro]
          Length = 615

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 22/113 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTREPGGTP------- 45
             G  I+  G  GAGKTT I+LL +         ++  KN +    +    +        
Sbjct: 397 KKGQTIAIVGPTGAGKTTIINLLTKFYGIDDGAIYIDGKNINAITRKSLRQSISMVLQDT 456

Query: 46  --AAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
              ++  R  +    +     E E     AA+L H  + I         +L D
Sbjct: 457 FLFSDTIRENIRYGRLTATDEEVE----QAAKLAHAHDFIMQLPQGYDTILSD 505


>gi|29346701|ref|NP_810204.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          thetaiotaomicron VPI-5482]
 gi|253568749|ref|ZP_04846160.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 1_1_6]
 gi|298387170|ref|ZP_06996723.1| polyamine ABC transporter, ATP-binding protein [Bacteroides sp.
          1_1_14]
 gi|81842251|sp|Q8A883|POTA_BACTN RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|29338598|gb|AAO76398.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          thetaiotaomicron VPI-5482]
 gi|251842822|gb|EES70902.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 1_1_6]
 gi|298259839|gb|EFI02710.1| polyamine ABC transporter, ATP-binding protein [Bacteroides sp.
          1_1_14]
          Length = 463

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|67525745|ref|XP_660934.1| hypothetical protein AN3330.2 [Aspergillus nidulans FGSC A4]
 gi|40744118|gb|EAA63298.1| predicted protein [Aspergillus nidulans FGSC A4]
 gi|259485694|tpe|CBF82933.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 852

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 52/177 (29%), Gaps = 62/177 (35%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G +G GK+T    L   L+    +V   R                           
Sbjct: 8   IVLHGNDGTGKST----LTLALRAAG-EVVYARGDED----------------------- 39

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLC-DRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                             PAL +  ++   DRF               +   D +    V
Sbjct: 40  ------------------PALEDTLVVRSFDRFTLQLADDDRVSLPESYTDRDGVHRRIV 81

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           +       IILD  + +   R+ NR S       D +E +  + + + R  FL++A 
Sbjct: 82  R-------IILDADLPVLQARLANRPST------DKWESEKALFYFRAR--FLELAA 123


>gi|291531054|emb|CBK96639.1| ABC-type multidrug transport system, ATPase and permease components
           [Eubacterium siraeum 70/3]
          Length = 614

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 14/92 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---------LLSC 57
           I+  G  GAGKTT + LL RF +     + +             R +         L   
Sbjct: 405 IAIVGPTGAGKTTIVKLLMRFYELNGGRILIDGYDIADFDRSELRELFGMVLQDTWLFKG 464

Query: 58  GVDEFG-----AEAEAIVFAAARLDHVENVIR 84
            + E          +  V AAA+  HV++ IR
Sbjct: 465 SIMENIRYGKLDATDDEVIAAAKAAHVDHFIR 496


>gi|242036579|ref|XP_002465684.1| hypothetical protein SORBIDRAFT_01g043710 [Sorghum bicolor]
 gi|241919538|gb|EER92682.1| hypothetical protein SORBIDRAFT_01g043710 [Sorghum bicolor]
          Length = 273

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 42/152 (27%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G+ G+GK+T    L   L  + +                    +L      
Sbjct: 94  QKGCVVWITGLSGSGKSTLACALSHELHYRGH-----------------ITYVLDGDNLR 136

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
            G   +    A  R +++     V +     G I +      S  + Y+ +RD       
Sbjct: 137 HGLNRDLSFKAEDRAENIRRVGEVAKLFADAGIICIA-----SLISPYRRDRD------- 184

Query: 118 DSLQEISVQEVMPD---CTIILDLPVDIGLKR 146
                 + + ++PD     + +DLP+ I   R
Sbjct: 185 ------ACRALLPDSNFIEVFMDLPLKICEAR 210


>gi|206968869|ref|ZP_03229824.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|228953929|ref|ZP_04115967.1| hypothetical protein bthur0006_33050 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|206735910|gb|EDZ53068.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|228805749|gb|EEM52330.1| hypothetical protein bthur0006_33050 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 195

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 8   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 57  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L ++  +    D    LD+
Sbjct: 113 ELYKL--RACRSDVIFYLDV 130


>gi|198419019|ref|XP_002130605.1| PREDICTED: similar to ADP-ribosylation factor-like protein 3 [Ciona
           intestinalis]
          Length = 301

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR-----KNYDVH 36
           I   G+EG GK+T +++L +  +      + ++V 
Sbjct: 132 IVVLGLEGCGKSTLLNVLAKRPEEGYSPTQGFNVV 166


>gi|168187966|ref|ZP_02622601.1| ABC-type multidrug/protein/lipid transport system, ATPase
           [Clostridium botulinum C str. Eklund]
 gi|169294194|gb|EDS76327.1| ABC-type multidrug/protein/lipid transport system, ATPase
           [Clostridium botulinum C str. Eklund]
          Length = 619

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 24/52 (46%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
             G  I+  G  GAGKTT I+LL RF +  N  + +  E       E  R +
Sbjct: 397 KKGETIAIVGPTGAGKTTLINLLMRFYEINNGSITIDGEDIRNFKRENLRSI 448


>gi|119364605|sp|Q73HV1|KGUA_WOLPM RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
          Length = 201

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 34/209 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+ +      GAGKTT  + L          V   TR+P            +      E 
Sbjct: 7   GVLLVLSSPSGAGKTTISAKLLEQSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHEL 66

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + + +A    +      + I   L  G  +L       S  +QG     + +    
Sbjct: 67  CKAGQMLEYAKVFENFYGIPRDFIEQNLSSGISVLL------SIDWQGAFHLFKLMRKKV 120

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +              IL  P    ++ ++ R   R S      ER       +  +   +
Sbjct: 121 VS-----------VFIL--PP--SMEELRLRLQKRNSDDASEIER-------RLAEAQKE 158

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           I++       I++           I +I+
Sbjct: 159 ISKRDKYDYVIIN--DDIDKSVEEISSIL 185


>gi|118468595|ref|YP_886970.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118169882|gb|ABK70778.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis str.
           MC2 155]
          Length = 273

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 10/88 (11%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGV 59
           G F+S  G  G GK+T + ++          V +     R P         R  LL    
Sbjct: 50  GEFVSIAGPSGCGKSTLLKVIAGLTDATGGQVRLRGNRVRGPQREIGYVFQRAALLEWRS 109

Query: 60  DEFGAEAEAIV------FAAARLDHVEN 81
                  +A +       AA R DH+  
Sbjct: 110 VRKNILLQAEMRGMPRQVAARRADHLIE 137


>gi|110005264|emb|CAK99589.1| putative deoxynucleoside kinase protein [Spiroplasma citri]
          Length = 207

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 59/208 (28%), Gaps = 45/208 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKT     L + L    +   +   P      +          +       
Sbjct: 3   IAVFGTVGAGKTKVSEELCKQLNYNLFKEPLEENPYFKDFYQDMEGFAFKMQIYMLTTRI 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----Q 121
           E         D V +  R  L +   +               R S     ++ +      
Sbjct: 63  EQFFNIDNLDDTVFD--RTILEDPVFV---------------RVSHLLKIMNEIDFKVYN 105

Query: 122 EISVQEVMP--------DCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----ERKDVM 168
                 ++P        D  I L +  +  ++R++ R    E     Y+     E+ +++
Sbjct: 106 RFFQNVIVPILKQKLGFDVIIYLKVSTEKAVERIKQRGRQLELETPYYYWEKLNEQYEIL 165

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHS 196
            HE               +  ++D+ + 
Sbjct: 166 YHE----------LKNDYKFIVIDADND 183


>gi|57167633|ref|ZP_00366773.1| Domain of unknown function (DUF344) family [Campylobacter coli
          RM2228]
 gi|305433138|ref|ZP_07402294.1| polyphosphate kinase 2 [Campylobacter coli JV20]
 gi|57020755|gb|EAL57419.1| Domain of unknown function (DUF344) family [Campylobacter coli
          RM2228]
 gi|304443839|gb|EFM36496.1| polyphosphate kinase 2 [Campylobacter coli JV20]
          Length = 293

 Score = 36.9 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 3  SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
           GL   I  EG + AGK   I  L  +L  +   V    +P    
Sbjct: 52 KGLKVLILIEGRDAAGKGGAIKRLIEYLNPRGCRVVALEKPSDVE 96


>gi|329947898|ref|ZP_08294830.1| signal recognition particle protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328523522|gb|EGF50620.1| signal recognition particle protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 562

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L R+L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGRWLRDQGKRVLLV 134


>gi|325572175|ref|ZP_08147242.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus casseliflavus ATCC 12755]
 gi|325155576|gb|EGC67790.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus casseliflavus ATCC 12755]
          Length = 241

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N G  I F G  G+GK+T + L+   L
Sbjct: 53 NKGEVIVFSGPSGSGKSTLLKLIGTLL 79


>gi|307295160|ref|ZP_07574999.1| sulfate adenylyltransferase, large subunit [Sphingobium
           chlorophenolicum L-1]
 gi|306878663|gb|EFN09882.1| sulfate adenylyltransferase, large subunit [Sphingobium
           chlorophenolicum L-1]
          Length = 637

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L R N                     LL       G   + 
Sbjct: 474 FTGLSGAGKSTIANLVEKKLARMNRHTF-----------------LLDGDNVRHGLNKDL 516

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R++++     V +     G I++ 
Sbjct: 517 GFTDADRVENIRRVGEVAKLMTDAGLIVIT 546


>gi|302392507|ref|YP_003828327.1| shikimate kinase [Acetohalobium arabaticum DSM 5501]
 gi|302204584|gb|ADL13262.1| Shikimate kinase [Acetohalobium arabaticum DSM 5501]
          Length = 169

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 47/198 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+T    L   L+    +   + E     A      +    G + F           
Sbjct: 11  GTGKSTVGQHLSERLE---LEFVDSDEVIEERAGREISSIFAEYGEEYF----------- 56

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
              D    VI     + ++++            G     +   ++ L++           
Sbjct: 57  --RDLETEVITDLSRQQRLVIST----------GGGVVLRQENIEQLRKKGT-------I 97

Query: 134 IILDLPVDIGLKRVQ--NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
           I+L    ++ L RV+  +R  L     L+  +          R+ + DI        + +
Sbjct: 98  ILLTAEPEVILDRVKDSDRPLLEVPEPLEKIKEMLAD-----RREYYDITE------YKI 146

Query: 192 DSAH-SFQSVATNILNIV 208
           D++  S   V   I  I+
Sbjct: 147 DTSQMSVAEVVAEIEKII 164


>gi|288925881|ref|ZP_06419811.1| ABC transporter, ATP-binding protein, MsbA family [Prevotella
           buccae D17]
 gi|288337305|gb|EFC75661.1| ABC transporter, ATP-binding protein, MsbA family [Prevotella
           buccae D17]
          Length = 613

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 8/140 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I+  G  G+GK+T + L+ R+   +  +V +             R ++ +   +  
Sbjct: 401 KGKTIALVGQSGSGKSTLLDLIPRYYDVQEGEVLIDGINVKDLGVHDLRQLIGNVNQEAI 460

Query: 63  GAEAEAIVFAA-----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                     A     A  + VE   + A     I+  DR  D++   +G R S      
Sbjct: 461 LFNDTFYNNIAFGVDGATREQVEEAAKIANAHEFIMQSDRGYDTNIGDRGGRLSGGQRQR 520

Query: 118 DSLQEISVQEVMPDCTIILD 137
            S+    ++   P   +ILD
Sbjct: 521 VSIARAILKNP-P--ILILD 537


>gi|283785106|ref|YP_003364971.1| putative ATP-binding protein of ABC transporter [Citrobacter
          rodentium ICC168]
 gi|282948560|emb|CBG88151.1| putative ATP-binding protein of ABC transporter [Citrobacter
          rodentium ICC168]
          Length = 272

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P G     A R +
Sbjct: 52 VTILGPSGSGKSTLIRLINQLESLSGGEIFIDDKPVGHLQGAALRQL 98


>gi|302558973|ref|ZP_07311315.1| adenylate kinase [Streptomyces griseoflavus Tu4000]
 gi|302476591|gb|EFL39684.1| adenylate kinase [Streptomyces griseoflavus Tu4000]
          Length = 217

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 19/152 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + L   L+  +           +   E  +             + 
Sbjct: 3   IVLVGPPGAGKGTQATRLAEKLRIPHISTGDLFRANISRQTELGKLAKSYMDAGNLVPDE 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             I  A  R++      +P    G   L D F          R+ SQ   LD L +   +
Sbjct: 63  VTIAMAKDRME------QPDAEGGF--LLDGF---------PRNVSQAEALDELLQ--TE 103

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
            +  D  + L+ P D  +KR+  R   R  + 
Sbjct: 104 GIKLDAVLDLEAPEDEVVKRIAGRRICRNDSA 135


>gi|224025099|ref|ZP_03643465.1| hypothetical protein BACCOPRO_01833 [Bacteroides coprophilus DSM
           18228]
 gi|224018335|gb|EEF76333.1| hypothetical protein BACCOPRO_01833 [Bacteroides coprophilus DSM
           18228]
          Length = 188

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN G  I F    G+GK+T I+ LL++ L         +R P G          L     
Sbjct: 1   MN-GKLIIFSAPSGSGKSTIINYLLQQNLNLAFSISATSRAPRGNEQNGVEYFFLTPEEF 59

Query: 60  DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96
            +  A+ E +    V+       +++ +   L  G+ ++ D
Sbjct: 60  KQRIAQGEFLEYEEVYPNRFYGTLKSQVEKQLAAGQNVIFD 100


>gi|195940431|ref|ZP_03085813.1| thiamine transporter ATP-binding subunit [Escherichia coli
          O157:H7 str. EC4024]
          Length = 95

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          I+  G  GAGK+T ++L+  FLQ      V    E    P A+    +L     
Sbjct: 28 IAVLGPSGAGKSTLLNLIAGFLQPASGTIVIDNGEYTYAPPAKRPVSMLFQENN 81


>gi|157737936|ref|YP_001490620.1| hypothetical protein Abu_1703 [Arcobacter butzleri RM4018]
 gi|157699790|gb|ABV67950.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
          Length = 378

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N  + I FEG + +GK   I  + R++  K+Y V    +P  T          L   +  
Sbjct: 152 NKRMIIIFEGRDASGKGGAIRRITRYMNNKHYRVVALGKPTET----QKNQWFLQRYITH 207

Query: 62  FGAEAEAIVFAAARLDHVENVIRP 85
           F    E ++F   R  +   ++ P
Sbjct: 208 FPTGGEIVLF--DRSWYNRAMVEP 229


>gi|192453590|ref|NP_001122171.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1
           [Danio rerio]
 gi|190337551|gb|AAI63464.1| Zgc:194985 [Danio rerio]
 gi|190338746|gb|AAI63465.1| Zgc:194985 [Danio rerio]
 gi|220679146|emb|CAX13455.1| novel protein similar to vertebrate 3'-phosphoadenosine
           5'-phosphosulfate synthase 1 (PAPSS1, zgc:194985) [Danio
           rerio]
          Length = 624

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 50/159 (31%), Gaps = 30/159 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R +++  +   A +         F D+         S       + ++I     +P
Sbjct: 105 ---DREENIRRIAEVAKL---------FADAGLVCIASFISPYSRDRMNARKIHEAAGLP 152

Query: 131 DCTIILDLPVDIGLKR----VQNRYSLRESACLDYFERK 165
              + +D P+D+  +R    +  R    E       + +
Sbjct: 153 FFEVFVDAPLDVCEQRDVKGLYKRARAGEIRGFTGIDSE 191


>gi|87200199|ref|YP_497456.1| TrwC protein [Novosphingobium aromaticivorans DSM 12444]
 gi|87135880|gb|ABD26622.1| TrwC protein [Novosphingobium aromaticivorans DSM 12444]
          Length = 542

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           ++   ++ +G+ GAGK+T +  +   L+ +   V    +P
Sbjct: 476 SNNRIVAIQGVAGAGKSTVLKPVADILREEGRSVLGLSKP 515


>gi|56758718|gb|AAW27499.1| SJCHGC06360 protein [Schistosoma japonicum]
          Length = 659

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 10/134 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-----EAARHVLLSCGVDE 61
           I F G+ G GK+T+++ +  +L  KN+ V +         A        R +      D+
Sbjct: 443 IVFCGVNGVGKSTNLAKIAFWLIEKNFRVLIAACDTFRSGAVEQLRTHVRKLNYIHPADQ 502

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G +    ++         ++ R A+   +    DR  D        R       + +L 
Sbjct: 503 HGGQIMVELYEQGYGRDAASIARSAINYAR----DRHFDVVLVDTAGRMQDNEPLMRALA 558

Query: 122 EISVQEVMPDCTII 135
            + +Q   PD  + 
Sbjct: 559 LL-IQTNQPDLVLF 571


>gi|58426836|gb|AAW75873.1| flagellar biosynthetic protein FlhF [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 610

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 17/121 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G  I+  G  GAGKTT I+ L +    ++   DV +             R  L S G  
Sbjct: 400 RGGVIALVGPTGAGKTTTIAKLAQRFAAQHTPRDVALVTTDTQRVGG---REQLHSYGRQ 456

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E     A   + + ++    L + K++L D       A  G+RD +    L+ L
Sbjct: 457 LGVAVHE-----ADSAESLLDLFE-RLRDYKLVLID------TAGMGQRDRALAAQLNWL 504

Query: 121 Q 121
           +
Sbjct: 505 R 505


>gi|70994950|ref|XP_752251.1| guanylate kinase [Aspergillus fumigatus Af293]
 gi|66849886|gb|EAL90213.1| guanylate kinase [Aspergillus fumigatus Af293]
 gi|159131006|gb|EDP56119.1| guanylate kinase [Aspergillus fumigatus A1163]
          Length = 228

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 50/226 (22%)

Query: 1   MNSG---LF--ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHV 53
           M +G    F  +   G  G GK+T +  L   +    +  V H TR P   P  E  R  
Sbjct: 29  MTTGAVQRFRPVVVSGPSGTGKSTLLKRLFAEYPDTFDLSVSHTTRAP--RPGEENGREY 86

Query: 54  LLSCGVDEFG-----AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
             +   D        A  E   F           ++    +GKI + D            
Sbjct: 87  YFTTKEDFLDLVSKNAFIEHAQFGGNYYGTTVQAVKDVAQKGKICVLD------------ 134

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKD 166
               +   +  ++   +         +   P   +   KR++ R +  E +      +  
Sbjct: 135 ---IEMEGVKQVKRTDLDAR-----FLFLAPPSLEELEKRLRGRATETEESLTKRLAQAK 186

Query: 167 VMIHEKRRQIFLDIARN--QPDRCHIVDSAHSFQSVATNILNIVWE 210
                      L+ A      D+  +       +     + + + +
Sbjct: 187 NE---------LEYAAQPGSHDKIVV---NDDLEKAYKELRDWIVD 220


>gi|327463081|gb|EGF09402.1| dephospho-CoA kinase [Streptococcus sanguinis SK1]
 gi|327474682|gb|EGF20087.1| dephospho-CoA kinase [Streptococcus sanguinis SK408]
          Length = 198

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 74/226 (32%), Gaps = 54/226 (23%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARH---VLLSC 57
           GI G   +GK+T       FL+++ Y        VH  +EPGG             +L  
Sbjct: 6   GITGGIASGKSTVT----EFLRQQGYQVIDADQVVHELQEPGGRLYQALLSAFGPAILQE 61

Query: 58  GVDEFGAEAEAIVF-----AAARLDHVENVIRPALMEGKILLC---DRFLDSSYAYQGER 109
                  +  A++F      A        +IR  L   + +L    D F           
Sbjct: 62  DGRLDRPKLGAMIFGNTELLAQSSQIQNRIIREELAGRRDMLAETEDIFFMDL---PLLF 118

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +     + D +              ++D+ V+  L R+  R +L +           + +
Sbjct: 119 ELQYEDWFDQIW-------------LVDVTVETQLSRLMTRNALSQDEAEKRI-AAQLSL 164

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
            EK        A        ++D+  S +     I N + + +++R
Sbjct: 165 QEK-----RKRAD------VLIDNNGSLEETRQQIRNAL-QKLERR 198


>gi|327395528|dbj|BAK12950.1| taurine import ATP-binding protein TauB [Pantoea ananatis
          AJ13355]
          Length = 272

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
             L +   G  G GKTT ++L+  FL  ++  V +  EP   P AE 
Sbjct: 43 KKALMVVL-GPSGCGKTTLLNLIAGFLPVQSGTVSLDGEPVRGPGAER 89


>gi|326474754|gb|EGD98763.1| guanylate kinase [Trichophyton tonsurans CBS 112818]
 gi|326484249|gb|EGE08259.1| guanylate kinase [Trichophyton equinum CBS 127.97]
          Length = 212

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 52/169 (30%), Gaps = 25/169 (14%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  G GK+T +  L   +  +  + V H TR P   P  E  R    +        
Sbjct: 25  VVISGPSGTGKSTLLKRLFAEYPDKFGFSVSHTTRGP--RPGEEDGREYNFTTK------ 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA +            I  A   G       +  S  A +   D  +   LD   E  
Sbjct: 77  --EAFLKLVDE----GGFIEHAQFGGNH-----YGTSIAAVKRVADQGRICVLDIEMEGV 125

Query: 125 VQEVMPDCT--IILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
            Q    D     +   P   +   +R++ R +  E +      +  V +
Sbjct: 126 KQVKRTDLNARFLFLAPPSIEELERRLRGRGTESEDSLQKRLAQARVEL 174


>gi|298243741|ref|ZP_06967548.1| signaling protein [Ktedonobacter racemifer DSM 44963]
 gi|297556795|gb|EFH90659.1| signaling protein [Ktedonobacter racemifer DSM 44963]
          Length = 199

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 27/160 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  GAGK+T    L    Q   +       P    +++  R V+      +    
Sbjct: 22  LIVLCGPAGAGKSTFARNLVHANQHAGFA------PTMIISSDYCRSVIFDDEASQQANR 75

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               +F          +I   + + +  + D     S A   +        L+     + 
Sbjct: 76  EAFDLFHF--------IIAKRMRQNRTTIAD-----STAISWDAR---RNLLELAHRYNY 119

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FER 164
              +     I ++  DI L+  Q R     +  ++Y F++
Sbjct: 120 HTSL----FIFNITPDICLRHEQQRQRRVGADVINYHFDQ 155


>gi|258592123|emb|CBE68428.1| Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP
          kinase) [NC10 bacterium 'Dutch sediment']
          Length = 233

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          L I+ +G  GAGK+T   LL + L  +  D
Sbjct: 8  LIIAIDGPVGAGKSTAARLLAQRLSYRYID 37


>gi|229178193|ref|ZP_04305564.1| ABC transporter ATP-binding protein [Bacillus cereus 172560W]
 gi|228605323|gb|EEK62773.1| ABC transporter ATP-binding protein [Bacillus cereus 172560W]
          Length = 330

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKKGEFTTLLGPSGCGKTTLLRMIA 49


>gi|255691428|ref|ZP_05415103.1| spermidine/putrescine import ATP-binding protein PotA
          [Bacteroides finegoldii DSM 17565]
 gi|260622815|gb|EEX45686.1| spermidine/putrescine import ATP-binding protein PotA
          [Bacteroides finegoldii DSM 17565]
          Length = 463

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|297202319|ref|ZP_06919716.1| polyphosphate kinase 2 [Streptomyces sviceus ATCC 29083]
 gi|197710161|gb|EDY54195.1| polyphosphate kinase 2 [Streptomyces sviceus ATCC 29083]
          Length = 290

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 34/123 (27%), Gaps = 31/123 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 73  IVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPNERERGQW----------------- 115

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +    ++H+          G+I+L DR   S Y   G          D  +    Q
Sbjct: 116 ----YFQRYVEHLPT-------AGEIVLFDR---SWYNRAGVERVMGFCSDDEYRRFMRQ 161

Query: 127 EVM 129
             +
Sbjct: 162 APL 164


>gi|145479639|ref|XP_001425842.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392914|emb|CAK58444.1| unnamed protein product [Paramecium tetraurelia]
          Length = 406

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 9/94 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE----- 61
           I   G  G GKT+ ++ L+  L+   Y+V V          +    ++   G +E     
Sbjct: 83  ICVTGGPGCGKTSVVTFLQERLKDFQYNVIVVPLLDDFILGQDQ-EIMQELGNEERNQMI 141

Query: 62  ---FGAEAEAIVFAAARLDHVENVIRPALMEGKI 92
                     + ++      V++     L +G I
Sbjct: 142 IKKMMLMQTLLDYSKDLAQQVKDKDSIILCQGGI 175


>gi|32476229|ref|NP_869223.1| hypothetical protein RB10061 [Rhodopirellula baltica SH 1]
 gi|32446773|emb|CAD76609.1| conserved hypothetical protein-putative containing GTP-binding
          domain [Rhodopirellula baltica SH 1]
          Length = 368

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          FI   G  GAGKTT I+ L + LQ +   V +        A      +L S G++
Sbjct: 7  FIMIGGFLGAGKTTLIARLAKQLQAEGKHVCIVTN--DQAAGLVDTQLLKSQGLE 59


>gi|27375201|ref|NP_766730.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum
          USDA 110]
 gi|27348337|dbj|BAC45355.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum
          USDA 110]
          Length = 271

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRF 27
            G FIS  G  G GK+T + L+ + 
Sbjct: 43 RKGEFISLLGPSGCGKSTALRLIAQL 68


>gi|222823654|ref|YP_002575228.1| adenylate kinase [Campylobacter lari RM2100]
 gi|254806978|sp|B9KFZ2|KAD_CAMLR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|222538876|gb|ACM63977.1| adenylate kinase [Campylobacter lari RM2100]
          Length = 190

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 43/223 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT  S++       N               +  R  + S    
Sbjct: 1   MKQLFLII--GAPGSGKTTDASIIAN--DNANI--------THYSTGDLLRAEVASGSEL 48

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLD 118
               ++         L+ V N I  AL       +L D +  S      E+       L 
Sbjct: 49  GKTIDSFISKGNLVPLEVVVNTIITALKNAPTNTILIDGYPRS-----VEQMLEFDKVLK 103

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           +  E++++ V         + V +  +  + R   R     D     +  +   R +++L
Sbjct: 104 NQSEVNLKGV---------IEVKVSEEVARERVLGRARGADD-----NEEVFNNRMKVYL 149

Query: 179 D--------IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +         A+      HI++   S +++  ++ N++ EL++
Sbjct: 150 EPLNEITNFYAKENIH--HIINGERSIEAIVADMKNLINELLK 190


>gi|113476420|ref|YP_722481.1| guanylate kinase [Trichodesmium erythraeum IMS101]
 gi|119371318|sp|Q110R6|KGUA_TRIEI RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|110167468|gb|ABG52008.1| guanylate kinase [Trichodesmium erythraeum IMS101]
          Length = 186

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 22/70 (31%), Gaps = 1/70 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M +G  I   G  G GK T +S L        + V   TR P        +   +     
Sbjct: 1  MQTGKLIVLTGPSGVGKGTLLSCLLHRHPGLAFSVSVTTRSPRPGEVEGKSYFFVDHDQF 60

Query: 60 DEFGAEAEAI 69
           E     E +
Sbjct: 61 REMIESEELL 70


>gi|327311279|ref|YP_004338176.1| GTPase [Thermoproteus uzoniensis 768-20]
 gi|326947758|gb|AEA12864.1| GTPase [Thermoproteus uzoniensis 768-20]
          Length = 249

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           FI   G  G+GK+T +S L  ++  + YDV V 
Sbjct: 5  FFI---GTAGSGKSTLVSALYNWMDEQGYDVAVV 35


>gi|325295441|ref|YP_004281955.1| UvrABC system protein A [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065889|gb|ADY73896.1| UvrABC system protein A [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 936

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVT 38
           GLF+   G+ G+GK+T I  +L + L ++ Y   VT
Sbjct: 630 GLFVCVTGVSGSGKSTLINEILYKALAKEIYKSKVT 665


>gi|302866620|ref|YP_003835257.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
           27029]
 gi|302569479|gb|ADL45681.1| AMP-dependent synthetase and ligase [Micromonospora aurantiaca ATCC
           27029]
          Length = 620

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 48  EAARHVLLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           EA RH+L+        +  E  +   AA  L  V + I P L   ++    R+     A 
Sbjct: 68  EAGRHMLI-----MMSSRTEHWLVDLAAVHLGAVPSTIYPTLSAEQM----RY----LAR 114

Query: 106 QGERDSSQHLFLDSLQEI-SVQEVMPDC--TIILDLPVDIG-----LKRVQNRYSLRESA 157
                         L+    +   +PD    +++D P +       L RV+        A
Sbjct: 115 HSAAQVLVLEGPAELERWRPIPADLPDLLRVVLVDEPAEPAGDAVPLSRVRTLGRAAREA 174

Query: 158 CLDYFERK 165
             D FER+
Sbjct: 175 DPDAFERR 182


>gi|281420114|ref|ZP_06251113.1| hypothetical protein PREVCOP_03972 [Prevotella copri DSM 18205]
 gi|281405914|gb|EFB36594.1| hypothetical protein PREVCOP_03972 [Prevotella copri DSM 18205]
          Length = 366

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 31/111 (27%), Gaps = 14/111 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PG-----GTPAAEAARHVL 54
           MN    I   G   AGKTT +  +        Y V    E P      G     + +   
Sbjct: 1   MNQIKKIVLTGGPCAGKTTAMVKVIEHFSSLGYKVFTIPEVPTMFTQAGMNYLTSNKDFF 60

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
                  F  +           + ++  +        I++CDR       Y
Sbjct: 61  FEGEKATFQTQINLEDSFLRMAETLQQPV--------IIVCDRGTMDISTY 103


>gi|226330869|ref|ZP_03806387.1| hypothetical protein PROPEN_04790 [Proteus penneri ATCC 35198]
 gi|225201664|gb|EEG84018.1| hypothetical protein PROPEN_04790 [Proteus penneri ATCC 35198]
          Length = 96

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT I +L   L+
Sbjct: 42 GPDGAGKTTLIRMLAGLLK 60


>gi|221194974|ref|ZP_03568030.1| putative ABC transporter, ATP-binding/permease protein [Atopobium
           rimae ATCC 49626]
 gi|221184877|gb|EEE17268.1| putative ABC transporter, ATP-binding/permease protein [Atopobium
           rimae ATCC 49626]
          Length = 583

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 8/139 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G ++  EG  G+GKTT I LL   ++     + +  +P G   AE     ++ C    
Sbjct: 352 HGGKYL-LEGDSGSGKTTLIQLLTDAMKPDAGRILLDGQPIGQYKAEQYARFIIPCSQQT 410

Query: 62  F----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERDSSQHLF 116
           F           +F     D+   VI      G   +  R+ D   +       S     
Sbjct: 411 FIFNASIRDNITLFCKDFTDNA--VIAALKKSGFEEILTRYPDGLDHKIDQSGSSLSGGE 468

Query: 117 LDSLQEISVQEVMPDCTII 135
              L    +    P   I 
Sbjct: 469 RQRLALARIFLFEPQIVIY 487


>gi|210134516|ref|YP_002300955.1| guanylate kinase [Helicobacter pylori P12]
 gi|217033388|ref|ZP_03438818.1| hypothetical protein HP9810_1g2 [Helicobacter pylori 98-10]
 gi|254779020|ref|YP_003057125.1| guanylate kinase [Helicobacter pylori B38]
 gi|308182493|ref|YP_003926620.1| guanylate kinase [Helicobacter pylori PeCan4]
 gi|210132484|gb|ACJ07475.1| 5'-guanylate kinase [Helicobacter pylori P12]
 gi|216944093|gb|EEC23521.1| hypothetical protein HP9810_1g2 [Helicobacter pylori 98-10]
 gi|254000931|emb|CAX28867.1| Guanylate kinase (GMP kinase) [Helicobacter pylori B38]
 gi|261839173|gb|ACX98938.1| guanylate kinase [Helicobacter pylori 52]
 gi|308064678|gb|ADO06570.1| guanylate kinase [Helicobacter pylori PeCan4]
 gi|315586312|gb|ADU40693.1| guanylate kinase [Helicobacter pylori 35A]
 gi|317012161|gb|ADU82769.1| guanylate kinase [Helicobacter pylori Lithuania75]
 gi|317177136|dbj|BAJ54925.1| guanylate kinase [Helicobacter pylori F16]
 gi|317179284|dbj|BAJ57072.1| guanylate kinase [Helicobacter pylori F30]
 gi|317181663|dbj|BAJ59447.1| guanylate kinase [Helicobacter pylori F57]
          Length = 206

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           M++   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MHNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|207092588|ref|ZP_03240375.1| guanylate kinase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 206

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           M++   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MHNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|186475927|ref|YP_001857397.1| hypothetical protein Bphy_1162 [Burkholderia phymatum STM815]
 gi|184192386|gb|ACC70351.1| protein of unknown function DUF344 [Burkholderia phymatum STM815]
          Length = 365

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 43/157 (27%), Gaps = 45/157 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 156 ILFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTELERGQW----------------- 198

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-------LFLDS 119
               +    + H+          G+I+L DR   S Y   G               F++ 
Sbjct: 199 ----YFQRYVQHLPT-------AGEIVLFDR---SWYNRAGVERVMGFCTQNEYIEFMEQ 244

Query: 120 L----QEISVQEVMPDCT-IILDLPVDIGLKRVQNRY 151
           +    + ++   +          +  +   +R + R 
Sbjct: 245 VPAFERHLAQSGI--HIVKFWFSVSREEQARRFKERQ 279


>gi|170681235|ref|YP_001745250.1| putative lipoprotein [Escherichia coli SMS-3-5]
 gi|170518953|gb|ACB17131.1| putative lipoprotein [Escherichia coli SMS-3-5]
          Length = 232

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 33/111 (29%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR--------KNYDVHVTREP------GGTPAAEAARH 52
           I+  G +G+GK+T  + L   L                   E        G P     R 
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 53  VLLSCGVDEFGA---EAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
                              +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 121


>gi|169827096|ref|YP_001697254.1| cell division protein ftsY-like protein [Lysinibacillus sphaericus
           C3-41]
 gi|168991584|gb|ACA39124.1| Cell division protein ftsY-like protein [Lysinibacillus sphaericus
           C3-41]
          Length = 448

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I F G+ G GKTT I  L   L+ +   V +    G T  A A   +
Sbjct: 238 ILFVGVNGVGKTTTIGKLAHRLKSQGKTVVLAA--GDTFRAGAIDQL 282


>gi|167463211|ref|ZP_02328300.1| manganese ABC transporter (ATP-binding protein) [Paenibacillus
          larvae subsp. larvae BRL-230010]
 gi|322382760|ref|ZP_08056604.1| manganese ABC transporter-like protein [Paenibacillus larvae
          subsp. larvae B-3650]
 gi|321153229|gb|EFX45675.1| manganese ABC transporter-like protein [Paenibacillus larvae
          subsp. larvae B-3650]
          Length = 250

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 12/23 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISL 23
          M  G  I+  G  GAGK+T I  
Sbjct: 35 MPEGKLIAIVGPNGAGKSTLIKA 57


>gi|154509174|ref|ZP_02044816.1| hypothetical protein ACTODO_01695 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798808|gb|EDN81228.1| hypothetical protein ACTODO_01695 [Actinomyces odontolyticus ATCC
           17982]
          Length = 527

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L ++L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGKWLREEGKTVLLV 134


>gi|153832970|ref|ZP_01985637.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|148870691|gb|EDL69597.1| conserved hypothetical protein [Vibrio harveyi HY01]
          Length = 188

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 22/109 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN+   I F G  G+GKT+ I      L +  Y   V     G    +    V L     
Sbjct: 1   MNN--LIVFTGGPGSGKTSVI----EHLTKLGY---VCAPETGRKVIQ--HQVALGGDAL 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKI----LLCDRFLDSSYAY 105
            +  +       A R + V    +      K     +  DR +  SY Y
Sbjct: 50  PWKNK------IAFRDEMVREE-QNNYEAHKHHNEFVFFDRGIVDSYGY 91


>gi|108562749|ref|YP_627065.1| guanylate kinase [Helicobacter pylori HPAG1]
 gi|188527125|ref|YP_001909812.1| guanylate kinase [Helicobacter pylori Shi470]
 gi|208434268|ref|YP_002265934.1| 5'-guanylate kinase [Helicobacter pylori G27]
 gi|217031546|ref|ZP_03437051.1| hypothetical protein HPB128_21g104 [Helicobacter pylori B128]
 gi|298736735|ref|YP_003729265.1| guanylate kinase [Helicobacter pylori B8]
 gi|308184124|ref|YP_003928257.1| guanylate kinase [Helicobacter pylori SJM180]
 gi|119371228|sp|Q1CUI1|KGUA_HELPH RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|107836522|gb|ABF84391.1| 5'-guanylate kinase [Helicobacter pylori HPAG1]
 gi|188143365|gb|ACD47782.1| guanylate kinase [Helicobacter pylori Shi470]
 gi|208432197|gb|ACI27068.1| 5'-guanylate kinase [Helicobacter pylori G27]
 gi|216946746|gb|EEC25342.1| hypothetical protein HPB128_21g104 [Helicobacter pylori B128]
 gi|261837762|gb|ACX97528.1| guanylate kinase [Helicobacter pylori 51]
 gi|297379541|gb|ADI34428.1| guanylate kinase [Helicobacter pylori v225d]
 gi|298355929|emb|CBI66801.1| guanylate kinase [Helicobacter pylori B8]
 gi|308060044|gb|ADO01940.1| guanylate kinase [Helicobacter pylori SJM180]
 gi|308063181|gb|ADO05068.1| guanylate kinase [Helicobacter pylori Sat464]
 gi|317008968|gb|ADU79548.1| guanylate kinase [Helicobacter pylori India7]
          Length = 206

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           M++   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MHNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|91791631|ref|YP_561282.1| sporulation related [Shewanella denitrificans OS217]
 gi|91713633|gb|ABE53559.1| Sporulation related [Shewanella denitrificans OS217]
          Length = 511

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 17/90 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDEFGAEA 66
           G +G+GK+T  + L   L+  N  + V   P    + E  R +L+        D+     
Sbjct: 29  GAKGSGKSTLAAALASELEEINSALVVC--PQHVDSNEIRRKILIQLISDPIFDDELPLT 86

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCD 96
           + ++            I+  L +   ++ D
Sbjct: 87  DTLL-----------RIQSYLTKPLHIIID 105


>gi|28897070|ref|NP_796675.1| adenylylsulfate kinase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153837912|ref|ZP_01990579.1| adenylylsulfate kinase [Vibrio parahaemolyticus AQ3810]
 gi|260363944|ref|ZP_05776683.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus K5030]
 gi|260877987|ref|ZP_05890342.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus AN-5034]
 gi|260896355|ref|ZP_05904851.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus Peru-466]
 gi|260900683|ref|ZP_05909078.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus AQ4037]
 gi|31076646|sp|Q87SX6|CYSC_VIBPA RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|28805278|dbj|BAC58559.1| adenylylsulfate kinase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748690|gb|EDM59541.1| adenylylsulfate kinase [Vibrio parahaemolyticus AQ3810]
 gi|308085182|gb|EFO34877.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus Peru-466]
 gi|308089881|gb|EFO39576.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus AN-5034]
 gi|308110242|gb|EFO47782.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus AQ4037]
 gi|308112581|gb|EFO50121.1| adenylyl-sulfate kinase [Vibrio parahaemolyticus K5030]
 gi|328471872|gb|EGF42749.1| adenylylsulfate kinase [Vibrio parahaemolyticus 10329]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|238786807|ref|ZP_04630608.1| Adenylyl-sulfate kinase [Yersinia frederiksenii ATCC 33641]
 gi|238725175|gb|EEQ16814.1| Adenylyl-sulfate kinase [Yersinia frederiksenii ATCC 33641]
          Length = 200

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 34/148 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ + F G+ G+GK+T    L++ L  +    +                 LL      
Sbjct: 25  HRGVVVWFTGLSGSGKSTLAGALEQALFAQGVSTY-----------------LLDGDNVR 67

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +     A R +++     V +  +  G ++L         A+     + + +  D
Sbjct: 68  HGLCRDLGFSDADRRENIRRVGEVAKLMVDAGLVVLT--------AFISPHRAERQMVRD 119

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            L  +S Q +     + +D P+ I   R
Sbjct: 120 ML--VSGQFIE----VFVDTPLAICEAR 141


>gi|312963639|ref|ZP_07778120.1| signal recognition particle-docking protein FtsY [Pseudomonas
           fluorescens WH6]
 gi|311282148|gb|EFQ60748.1| signal recognition particle-docking protein FtsY [Pseudomonas
           fluorescens WH6]
          Length = 463

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 264 GVNGAGKTTTIGKLAKKLQGEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 319

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A      +L+ D
Sbjct: 320 TGADSASVIFDAVQAAKARNIDVLIAD 346


>gi|309778982|ref|ZP_07673752.1| ABC transporter, ATP binding protein [Ralstonia sp. 5_7_47FAA]
 gi|308922329|gb|EFP67956.1| ABC transporter, ATP binding protein [Ralstonia sp. 5_7_47FAA]
          Length = 273

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----GGTPAAEAARHVLLSCGV 59
           G F++  G  G GK+T ++ +   L+     V V  EP     G       +  LL    
Sbjct: 44  GEFVAVVGPTGCGKSTLLNAVTGLLKPAGGTVSVFGEPLTGLNGNAGFMMQQDSLL-PWK 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALME 89
                 A  +VF    +D      RP + +
Sbjct: 103 TALDNVALGLVFQGMPVDEARERARPWMKK 132


>gi|302557295|ref|ZP_07309637.1| ABC transporter, ATP-binding protein [Streptomyces griseoflavus
           Tu4000]
 gi|302474913|gb|EFL38006.1| ABC transporter, ATP-binding protein [Streptomyces griseoflavus
           Tu4000]
          Length = 539

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-------REPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + LL   L+     V VT       +  G        R +L+S       
Sbjct: 37  GPNGAGKTTLLRLLAGELKPHGGSVTVTGGLGVMRQFVGSVRDETTVRDLLVSVAQPRIR 96

Query: 64  AEAEAIVFAAARLDH 78
             A A+       +H
Sbjct: 97  EAARAV----DAAEH 107


>gi|239832101|ref|ZP_04680430.1| adenylate kinase [Ochrobactrum intermedium LMG 3301]
 gi|239824368|gb|EEQ95936.1| adenylate kinase [Ochrobactrum intermedium LMG 3301]
          Length = 194

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 61/222 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   LL    ++       T         +  R  +      E G  A+A++
Sbjct: 7   GPPGAGKGTQAGLLT---KKHGIPQLST--------GDMLRAAV--AQQSEIGKRAKAVM 53

Query: 71  FAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   V + I           P    G   + D +  +    Q              
Sbjct: 54  ---DAGQLVSDEIVNQIVSERIDAPDCANGF--ILDGYPRTVPQAQALG----------- 97

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEK 172
             ++ + +  D  I L +  +  +KR+++R          +R     + F ++ V   EK
Sbjct: 98  TMLAGKGLKLDAVIELKVDENALVKRMESRVNETIAKGGQVRSDDNPEAFRKRLVEYREK 157

Query: 173 R------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                       ++         +++     + V   I  I+
Sbjct: 158 TAPLSSYYAGTGEL--------RVINGMAPVEEVTAEIERIL 191


>gi|296141674|ref|YP_003648917.1| hypothetical protein Tpau_4007 [Tsukamurella paurometabola DSM
          20162]
 gi|296029808|gb|ADG80578.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
          20162]
          Length = 180

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          ++ +G  GAGK+T+   L   L+     V + R
Sbjct: 17 VAVDGPSGAGKSTYAQRLVDELRAGGARVALVR 49


>gi|284992853|ref|YP_003411407.1| adenylate kinase [Geodermatophilus obscurus DSM 43160]
 gi|284066098|gb|ADB77036.1| adenylate kinase [Geodermatophilus obscurus DSM 43160]
          Length = 204

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 42/217 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK T   ++   L         T         +  R  +   G  E G +A
Sbjct: 3   VVLLGPPGAGKGTQAQVIADRL---GVPAIST--------GDIFRANV--NGKTELGLQA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLFLD 118
           ++ +      D V + I  A+++ ++         L D F  ++        +      D
Sbjct: 50  KSYM---DAGDLVPDEITVAMVKDRLAEDDAKGGFLLDGFPRTT--------AQAEQLRD 98

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           SL E+       DC + L +  D  ++R+  R  L +   +   + K   +  +  Q++ 
Sbjct: 99  SLHELGQAL---DCVLELVVDEDELVRRLSGRRVLVDGQWVQRDDDKPETVRHRL-QVYR 154

Query: 179 DIARNQPDRC------HIVDSAHSFQSVATNILNIVW 209
           +                 +D+  + + V    ++ + 
Sbjct: 155 EQTAPLSGWYDSEGLLTQIDAIGAVEEVTQRAMSALE 191


>gi|209551218|ref|YP_002283135.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536974|gb|ACI56909.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM2304]
          Length = 270

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +G F+S  G  G+GK+T + LL + L+     V  
Sbjct: 30 NGEFVSIVGPSGSGKSTVLRLLTQALRPDAGSVLF 64


>gi|167749818|ref|ZP_02421945.1| hypothetical protein EUBSIR_00786 [Eubacterium siraeum DSM 15702]
 gi|167657130|gb|EDS01260.1| hypothetical protein EUBSIR_00786 [Eubacterium siraeum DSM 15702]
          Length = 614

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 14/92 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---------LLSC 57
           I+  G  GAGKTT + LL RF +     + +             R +         L   
Sbjct: 405 IAIVGPTGAGKTTIVKLLMRFYELNGGRILIDGYDIADFDRSELRELFGMVLQDTWLFKG 464

Query: 58  GVDEFG-----AEAEAIVFAAARLDHVENVIR 84
            + E          +  V AAA+  HV++ IR
Sbjct: 465 SIMENIRYGKLDATDDEVIAAAKAAHVDHFIR 496


>gi|167570596|ref|ZP_02363470.1| adenylylsulfate kinase [Burkholderia oklahomensis C6786]
          Length = 203

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                     A+ ++L       G  ++   
Sbjct: 20 GLPGAGKTTTANALLNRL-----------------LGSGAKAIVLDGDTLRTGLCSDLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A R++++     V +    EG +++
Sbjct: 63 SDADRIENIRRFAHVAKLFQREGYVVI 89


>gi|159028342|emb|CAO87240.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 291

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 69/204 (33%), Gaps = 33/204 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGK+T I ++    +          YDV   R+          + + +   +  + 
Sbjct: 37  GPNGAGKSTTIRMIITLTEASQGEIEVAGYDVKKYRDQVKKNIGVVLQQISVDGELTVWE 96

Query: 64  AEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                      R+ H+ N  R  L++     + L DR   S+ A        + L     
Sbjct: 97  NMEFH-----GRMHHIPNPQRQELIDRYLDYVSLSDR--KSALAKTLSGGMKRRL----- 144

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI----HEKRRQI 176
            +I+   +     + LD    +GL     R        L+   ++ + I    H      
Sbjct: 145 -QIARALLHEPKILFLD-EPTVGLDPQNRRRLWEVIRDLN---QQGMTILLTTHYMEEVE 199

Query: 177 FL--DIARNQPDRCHIVDSAHSFQ 198
           FL  D A  +P R  I+D+    +
Sbjct: 200 FLCQDNAAGKPGRIGIMDAGKLIE 223


>gi|145239539|ref|XP_001392416.1| adenylyl-sulfate kinase [Aspergillus niger CBS 513.88]
 gi|134076927|emb|CAK45336.1| unnamed protein product [Aspergillus niger]
          Length = 211

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 33/152 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
             GL I   G+  +GK+T    L  + L+ +   VH  R               L     
Sbjct: 23  QRGLTIWLTGLSASGKSTLAVELEHQLLRDRG--VHAYR---------------LDGDNI 65

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118
            FG   +     A R +++  +   A +         F DSS        S      D  
Sbjct: 66  RFGLNKDLGFSEADRNENIRRIAEVAKL---------FADSSAIAITSFISPYRKDRDTA 116

Query: 119 -SLQEISVQEV---MPDCTIILDLPVDIGLKR 146
             L E+        +P   + +D+PV++  +R
Sbjct: 117 RQLHEVPTPGEETGLPFVEVYVDVPVEVAEQR 148


>gi|148556244|ref|YP_001263826.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Sphingomonas wittichii RW1]
 gi|148501434|gb|ABQ69688.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Sphingomonas wittichii RW1]
          Length = 640

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L R N                     LL       G   + 
Sbjct: 477 FTGLSGAGKSTIANLVEKKLARMNRHTF-----------------LLDGDNVRHGLNKDL 519

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R++++     V +     G I++ 
Sbjct: 520 GFTDADRVENIRRVGEVAKLMTDAGLIVIT 549


>gi|119776020|ref|YP_928760.1| adenylylsulfate kinase [Shewanella amazonensis SB2B]
 gi|166221090|sp|A1S9N4|CYSC_SHEAM RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|119768520|gb|ABM01091.1| adenylylsulfate kinase [Shewanella amazonensis SB2B]
          Length = 198

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  + F G+ GAGK+T    L+  L R+                      LL      
Sbjct: 22  HRGAILWFTGLSGAGKSTLAGALEAELFRRG-----------------LHSYLLDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +       R +++     V +  L  G ++L 
Sbjct: 65  HGLCKDLGFSLEDRRENIRRVGEVAKLMLDAGLLVLS 101


>gi|329767266|ref|ZP_08258793.1| hypothetical protein HMPREF0428_00490 [Gemella haemolysans M341]
 gi|328836933|gb|EGF86580.1| hypothetical protein HMPREF0428_00490 [Gemella haemolysans M341]
          Length = 354

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L+++   V +    G T  A A     L       GA+     
Sbjct: 146 GVNGVGKTTSIGKLAHNLKKEGKKVLIAA--GDTFRAGAIDQ--LDVWAKRSGADIVKSH 201

Query: 71  FAAARLDHVENVIRPALMEGKIL-LCD 96
             A     + + I+ A  +G  + LCD
Sbjct: 202 EGADSAAIIFDAIQSAKAKGYDVLLCD 228


>gi|320586086|gb|EFW98765.1| ABC multidrug transporter [Grosmannia clavigera kw1407]
          Length = 1123

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 13/144 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCG 58
             G  ++  G  GAGKTT + +L +  +        + V  +P G     A  +   +  
Sbjct: 512 KPGQLVALMGSSGAGKTTLMDVLAQR-KDAGRVEGSIMVNGKPQGISFQRATGYCEQNDV 570

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL--LCDRFLDSSYAYQGERDSSQHLF 116
            +      EA++F+A     +     P L + + +  + D    +S  +       + L 
Sbjct: 571 HEPTATVLEALLFSARLRQPMS---VPDLEKRQHVIQIMDLLELTSMQHAIIGSPGEGLS 627

Query: 117 LDSLQE--ISVQEV-MPDCTIILD 137
           ++  +   ++V+ V  P   + LD
Sbjct: 628 IEQRKRLTLAVELVAKPAL-LFLD 650


>gi|317012432|gb|ADU83040.1| adenylate kinase [Helicobacter pylori Lithuania75]
          Length = 191

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 38/219 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S    Q          L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
           S  E+ ++ V         + V++     + R   R     D     +V+ H + R +FL
Sbjct: 105 SQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150

Query: 179 D---IARNQPDRCHI---VDSAHSFQSVATNILNIVWEL 211
           D     +N      +   ++   S + +   +   +   
Sbjct: 151 DPLGEIQNFYKNKKVHKAINGERSIEEIVGEMQEYILSF 189


>gi|297564604|ref|YP_003683576.1| cytidylate kinase [Meiothermus silvanus DSM 9946]
 gi|296849053|gb|ADH62068.1| cytidylate kinase [Meiothermus silvanus DSM 9946]
          Length = 222

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 77/229 (33%), Gaps = 48/229 (20%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+ +G   +GK++    +   +                 +    R            
Sbjct: 16  GTIITIDGPSASGKSSVAQRVAAAI-----------GLPYVSSGLLYRGATYQVQRYRVN 64

Query: 64  AEAEAIVFAAARLDHVENVIRP----ALMEGKIL---LCDRFLDSS------------YA 104
            E EA + A      ++ + RP     L EG+ +   L  R +D+             Y 
Sbjct: 65  PEDEAAILATLEAHPIQLLPRPEGNRLLAEGQDITEQLHTREVDAMVSAVSKHKRVRQYV 124

Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCT--IILDLPVDI-GLKRVQNRYSLRESACLDY 161
           YQ  R+ S    ++  +++    V PD T    L    ++  L+RV  R +  E+     
Sbjct: 125 YQRLRELSPPFVVEG-RDMGS-TVFPDATRKFYLTARPEVRALRRVPERNAEYETV---- 178

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH-SFQSVATNILNIV 208
                  + E  R+   D A+  P     +VD++      V   IL  +
Sbjct: 179 -------LQEILRRDQADRAQLAPAPDAVLVDTSEMGIDDVVRTILERI 220


>gi|296394376|ref|YP_003659260.1| signal recognition particle protein [Segniliparus rotundus DSM
           44985]
 gi|296181523|gb|ADG98429.1| signal recognition particle protein [Segniliparus rotundus DSM
           44985]
          Length = 516

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++L+ + +
Sbjct: 107 GLQGAGKTTLAGKLAKWLKSQGH 129


>gi|295095798|emb|CBK84888.1| Uncharacterized conserved protein [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 272

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 43/161 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG +GAGK   I  +   +  + + V     P                         
Sbjct: 51  IVFEGRDGAGKGGAIKAITERVSPRVFRVVALPAPTDKE--------------------- 89

Query: 67  EAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123
                   +         P L   G+I++ DR   S Y   G          +  ++   
Sbjct: 90  --------KSQLYFQRYVPHLPSAGEIVIFDR---SWYNRAGVERVMGFCTEEQAEKFLD 138

Query: 124 ---SVQEVMPD-----CTIILDLPVDIGLKRVQNRYSLRES 156
               +++ M D         L++      +R+++R +    
Sbjct: 139 GTPVMEKAMVDAGIILLKYWLEVTPKEQERRLRDRINDGRK 179


>gi|293189830|ref|ZP_06608544.1| signal recognition particle protein [Actinomyces odontolyticus
           F0309]
 gi|292821245|gb|EFF80190.1| signal recognition particle protein [Actinomyces odontolyticus
           F0309]
          Length = 527

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L ++L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGKWLREEGKTVLLV 134


>gi|240142205|ref|YP_002966715.1| putative replication protein A [Methylobacterium extorquens AM1]
 gi|240012149|gb|ACS43374.1| putative replication protein A [Methylobacterium extorquens AM1]
          Length = 425

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  + Y V       G      A    L     E    A+A ++ A
Sbjct: 148 GSGKTTTAAHLAQYLALRGYRVL------GLDLDPQASFTALHGLQPELDVAADASLYNA 201

Query: 74  AR 75
            R
Sbjct: 202 IR 203


>gi|229918273|ref|YP_002886919.1| ABC transporter [Exiguobacterium sp. AT1b]
 gi|229469702|gb|ACQ71474.1| ABC transporter related [Exiguobacterium sp. AT1b]
          Length = 565

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 17/99 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-------------KRFLQRKNYDVHVTREPGGTPAA 47
           MN G  IS  G  G+GKTT +++L                L+   +   + R P      
Sbjct: 348 MNKGERISITGPNGSGKTTLLNVLIGERAPHSGVIKRHPRLKIGYFSQTLERLP---ETG 404

Query: 48  EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPA 86
                +L +  + E  A    +     R D V   I  A
Sbjct: 405 TLLEALLANSEIGETEART-LLAHFLFRRDEVHRPITEA 442


>gi|206901804|ref|YP_002250485.1| ABC transporter ATP-binding protein [Dictyoglomus thermophilum
          H-6-12]
 gi|206740907|gb|ACI19965.1| ABC transporter ATP-binding protein [Dictyoglomus thermophilum
          H-6-12]
          Length = 432

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          N G FI+  G  G+GK+T + ++   L+     V+ 
Sbjct: 31 NEGDFIALLGPSGSGKSTILRIIAGLLKPNKGKVYY 66


>gi|124028214|ref|YP_001013534.1| adenylyl-sulfate kinase [Hyperthermus butylicus DSM 5456]
 gi|123978908|gb|ABM81189.1| Adenylyl-sulfate kinase [Hyperthermus butylicus DSM 5456]
          Length = 193

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 44/136 (32%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT   L    L+   Y V            +  R  + +        E     
Sbjct: 22  GLPGSGKTTIARLAAEKLREMGYRVEHL-------DGDWVRKTI-NPDAGYTREERRRH- 72

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                L  V  + R     G I+LC     S Y                ++EI   E +P
Sbjct: 73  -----LLRVAWIARLLARHGVIVLC--SFVSPY----------RDVRREVREIVEAEGVP 115

Query: 131 DCTIILDLPVDIGLKR 146
              + +  PV+  +KR
Sbjct: 116 FIEVYVKCPVEECIKR 131


>gi|150400034|ref|YP_001323801.1| ATPase [Methanococcus vannielii SB]
 gi|44719|emb|CAA27650.1| hypothetical protein [Methanococcus vannielii]
 gi|150012737|gb|ABR55189.1| PilT protein domain protein [Methanococcus vannielii SB]
          Length = 634

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+F+S  G  G+GK+T ++ L    +     V     P         
Sbjct: 281 GVFVS--GAPGSGKSTFVAALAERFKNMGKIVKTMESPRDLQVGNEI 325


>gi|15644949|ref|NP_207119.1| guanylate kinase [Helicobacter pylori 26695]
 gi|2497495|sp|P56103|KGUA_HELPY RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|2313420|gb|AAD07389.1| 5'-guanylate kinase (gmk) [Helicobacter pylori 26695]
          Length = 206

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           M++   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MHNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|57505426|ref|ZP_00371354.1| guanylate kinase [Campylobacter upsaliensis RM3195]
 gi|57016251|gb|EAL53037.1| guanylate kinase [Campylobacter upsaliensis RM3195]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 17/105 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAA---------EAAR 51
            G  +   G  GAGK+T +  L    + + Y      TR P               E  +
Sbjct: 2   RGFILLISGPSGAGKSTLLKKLFEEFKDELYFSISSTTRTPRDGEINGVHYHFISQEEFQ 61

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           + + +    E+    E     + R  H       AL +GKI++ D
Sbjct: 62  NGIKNGDFLEWARVHENFYGTSLR--HTNK----ALDKGKIVIFD 100


>gi|331648776|ref|ZP_08349864.1| hypothetical ATP-binding protein YghS [Escherichia coli M605]
 gi|331042523|gb|EGI14665.1| hypothetical ATP-binding protein YghS [Escherichia coli M605]
          Length = 224

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/246 (12%), Positives = 64/246 (26%), Gaps = 66/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR--------KNYDVHVTREP------GGTPAAEAARH 52
           I+  G +G+GK+T  + L   L                   E        G P     R 
Sbjct: 4   IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 63

Query: 53  VLLSCGVDEFGA---EAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98
                              +++  +  R      ++  +  +G +L+ DR+         
Sbjct: 64  KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 122

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152
            D     Q  + +  + ++  L++  ++        +P   I L +       R      
Sbjct: 123 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFSR------ 173

Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206
                     + +   + EK            P       R   +D       +    L 
Sbjct: 174 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEIMQASLR 217

Query: 207 IVWELV 212
            +   +
Sbjct: 218 AIHAAL 223


>gi|330448409|ref|ZP_08312057.1| putative 2-aminoethylphosphonate ABC transport system,
          ATP-binding protein component [Photobacterium
          leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492600|dbj|GAA06554.1| putative 2-aminoethylphosphonate ABC transport system,
          ATP-binding protein component [Photobacterium
          leiognathi subsp. mandapamensis svers.1.1.]
          Length = 357

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G FI F G  G GKTT +  + 
Sbjct: 27 IHKGEFICFLGPSGCGKTTLLRAIA 51


>gi|330796509|ref|XP_003286309.1| hypothetical protein DICPUDRAFT_54176 [Dictyostelium purpureum]
 gi|325083736|gb|EGC37181.1| hypothetical protein DICPUDRAFT_54176 [Dictyostelium purpureum]
          Length = 749

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
            SG  IS  G  GAGKTT + +L   L    
Sbjct: 137 KSGEMISIMGPSGAGKTTLLDILAHRLPING 167


>gi|320532006|ref|ZP_08032899.1| signal recognition particle protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320135770|gb|EFW27825.1| signal recognition particle protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 561

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L R+L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGRWLRDQGKRVLLV 134


>gi|320526794|ref|ZP_08027984.1| putative ferrichrome transport ATP-binding protein FhuC
          [Solobacterium moorei F0204]
 gi|320132762|gb|EFW25302.1| putative ferrichrome transport ATP-binding protein FhuC
          [Solobacterium moorei F0204]
          Length = 251

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           F++  G  G GKTT +  + R L+R + ++  
Sbjct: 29 RFVTILGPNGCGKTTLLKNIYRVLKRDSGEILF 61


>gi|260426812|ref|ZP_05780791.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260421304|gb|EEX14555.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 506

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 56/193 (29%), Gaps = 32/193 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             ++  G+ G GKTT    L   L      VH+  +      A AA        ++    
Sbjct: 333 RLLAIGGLSGTGKTTLARDLAPLLAPTPGAVHLRSDLERKRLAGAA-------PLEHLPP 385

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            A       A  D +       L  G+ +L D                        + ++
Sbjct: 386 VAYTPAATRAVYDRLLGRAETLLGAGRSVLLD------------ATWLAPSERADAEALA 433

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184
            +  +P   + L+        RV  R      A  +   R+   +H +            
Sbjct: 434 QRAGVPFSALWLEADTGTLQDRVAGRRHDASDATQEVVARQ--ALHARV----------- 480

Query: 185 PDRCHIVDSAHSF 197
           P+    +D++ S 
Sbjct: 481 PEHWLRIDASRSP 493


>gi|229075545|ref|ZP_04208532.1| hypothetical protein bcere0024_33550 [Bacillus cereus Rock4-18]
 gi|228707524|gb|EEL59710.1| hypothetical protein bcere0024_33550 [Bacillus cereus Rock4-18]
          Length = 192

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 25/140 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 5   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 53

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    ++   D
Sbjct: 54  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIENELKD 109

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L ++  +E   D    LD+
Sbjct: 110 ELYKL--RECRSDVIFYLDV 127


>gi|198276982|ref|ZP_03209513.1| hypothetical protein BACPLE_03189 [Bacteroides plebeius DSM
          17135]
 gi|198270507|gb|EDY94777.1| hypothetical protein BACPLE_03189 [Bacteroides plebeius DSM
          17135]
          Length = 466

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++  G  G GKTT + L+ 
Sbjct: 32 IKKGEFVTILGPSGCGKTTLLRLIA 56


>gi|188589711|ref|YP_001922628.1| ferrichrome transport ATP-binding protein FhuC [Clostridium
          botulinum E3 str. Alaska E43]
 gi|188499992|gb|ACD53128.1| ferrichrome transport ATP-binding protein FhuC [Clostridium
          botulinum E3 str. Alaska E43]
          Length = 251

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60
            ISF G  GAGK+T +S++ R  ++     V  T+E       + +R + +L    +
Sbjct: 28 KIISFIGPNGAGKSTLLSMISRLAKKDSGEVVIDTKELSTWQDKDLSRTISILKQNNN 85


>gi|171920739|ref|ZP_02931949.1| guanylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|188524055|ref|ZP_03004150.1| guanylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198273526|ref|ZP_03206062.1| guanylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
 gi|209554054|ref|YP_002284611.1| guanylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225550820|ref|ZP_03771769.1| guanylate kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
 gi|171903486|gb|EDT49775.1| guanylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|195660059|gb|EDX53439.1| guanylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198250046|gb|EDY74826.1| guanylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
 gi|209541555|gb|ACI59784.1| guanylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379974|gb|EEH02336.1| guanylate kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
          Length = 190

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 78/225 (34%), Gaps = 46/225 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVT----RE---PGGTPAAEAARH 52
           M  G  I F G  G GK T +S +    +    Y V +T    RE    G          
Sbjct: 1   MKRGKLIVFSGPSGVGKHTILSKIIDRKELNLAYSVSMTTRKKREGEINGVDYYFVNDEE 60

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
              +   +E    AE   F   +      V+     EGK ++                  
Sbjct: 61  FKKAISNNELIEWAE---FVGNKYGTPRFVVEKLRNEGKNVI-----------------L 100

Query: 113 QHLFLDSLQ--EISVQEVMPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +   + +LQ  E+   +   D   I L LP    L  ++NR   R +  L+  E+     
Sbjct: 101 EIEVVGALQVLELFKND---DLISIFL-LPP--SLDELKNRLLKRNTETLETIEK----- 149

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             + ++   +++     + +I++   +    A  +  I+ + +++
Sbjct: 150 --RIQKASHELSIKDHYKYNIIN--DNPDHAANQLAEIILDEIKR 190


>gi|126699070|ref|YP_001087967.1| ABC transporter ATP-binding protein [Clostridium difficile 630]
 gi|254975020|ref|ZP_05271492.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-66c26]
 gi|255092409|ref|ZP_05321887.1| ABC transporter, ATP-binding protein [Clostridium difficile CIP
          107932]
 gi|255100492|ref|ZP_05329469.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-63q42]
 gi|255306434|ref|ZP_05350605.1| ABC transporter, ATP-binding protein [Clostridium difficile ATCC
          43255]
 gi|255314148|ref|ZP_05355731.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-76w55]
 gi|255516826|ref|ZP_05384502.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-97b34]
 gi|255649928|ref|ZP_05396830.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-37x79]
 gi|260683082|ref|YP_003214367.1| ABC transporter ATP-binding protein [Clostridium difficile CD196]
 gi|260686680|ref|YP_003217813.1| ABC transporter ATP-binding protein [Clostridium difficile
          R20291]
 gi|306520013|ref|ZP_07406360.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-32g58]
 gi|115250507|emb|CAJ68331.1| ABC-type transport system, ATP-binding protein [Clostridium
          difficile]
 gi|260209245|emb|CBA62544.1| ABC transporter, ATP-binding protein [Clostridium difficile
          CD196]
 gi|260212696|emb|CBE03779.1| ABC transporter, ATP-binding protein [Clostridium difficile
          R20291]
          Length = 225

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G FI+  G  G+GK+T + LL
Sbjct: 32 KGTFIAITGPSGSGKSTLLHLL 53


>gi|29839941|ref|NP_829047.1| cytidylate kinase [Chlamydophila caviae GPIC]
 gi|33301222|sp|Q824H2|KCY_CHLCV RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|29834288|gb|AAP04925.1| cytidylate kinase [Chlamydophila caviae GPIC]
          Length = 216

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+ +G  G GK+T    L   L 
Sbjct: 1  MIITIDGPSGTGKSTIAKALATELN 25


>gi|167037579|ref|YP_001665157.1| cytidylate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167040241|ref|YP_001663226.1| cytidylate kinase [Thermoanaerobacter sp. X514]
 gi|300914325|ref|ZP_07131641.1| cytidylate kinase [Thermoanaerobacter sp. X561]
 gi|307724439|ref|YP_003904190.1| cytidylate kinase [Thermoanaerobacter sp. X513]
 gi|320115994|ref|YP_004186153.1| cytidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166854481|gb|ABY92890.1| cytidylate kinase [Thermoanaerobacter sp. X514]
 gi|166856413|gb|ABY94821.1| cytidylate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|300889260|gb|EFK84406.1| cytidylate kinase [Thermoanaerobacter sp. X561]
 gi|307581500|gb|ADN54899.1| cytidylate kinase [Thermoanaerobacter sp. X513]
 gi|319929085|gb|ADV79770.1| cytidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 221

 Score = 36.9 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 65/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    L + L     D           A +   +++    + +    A
Sbjct: 5   IAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQEKVNLIEENKIADIAQSA 64

Query: 67  EAIV----FAAARLDHVENVIRP------------------------ALMEGKILLCDRF 98
           + I+          D  E + +P                         + EGK ++ D  
Sbjct: 65  DIILEGEKIFLDGKDISEEIRKPGVSEKVSLVSKIPKVREILVQKQRKIAEGKNVVMD-- 122

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNRYSLRES 156
                           + L            PD      L   ++   KR + R    ++
Sbjct: 123 ----------GRDIGTVVL------------PDAQFKFFLTASLEERAKR-RYRELKTKN 159

Query: 157 ACLDYFER----KDVMIHEKRRQIF-LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWE 210
             + Y+E     ++    + +R    L IA +      ++D+   S + V   + NI+ E
Sbjct: 160 VNVSYYEVLKEIENRDTIDSQRDTSPLKIAEDS----IVIDTTYLSEEEVVEKLYNIIKE 215

Query: 211 LVQKRV 216
            ++  +
Sbjct: 216 GLKGEI 221


>gi|325918122|ref|ZP_08180277.1| mannitol ABC transporter ATP-binding protein;sorbitol ABC
          transporter ATP-binding protein [Xanthomonas
          vesicatoria ATCC 35937]
 gi|325535668|gb|EGD07509.1| mannitol ABC transporter ATP-binding protein;sorbitol ABC
          transporter ATP-binding protein [Xanthomonas
          vesicatoria ATCC 35937]
          Length = 339

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G F+ F G  G GKTT + L+ 
Sbjct: 29 GKFVVFVGPSGCGKTTLLRLIA 50


>gi|319939038|ref|ZP_08013402.1| topology modulation protein [Streptococcus anginosus 1_2_62CV]
 gi|319812088|gb|EFW08354.1| topology modulation protein [Streptococcus anginosus 1_2_62CV]
          Length = 169

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 61/196 (31%), Gaps = 54/196 (27%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GK+T    L +      YD+                  LL     +F    
Sbjct: 3   IAIIGYSGSGKSTLAKYLAKH-----YDIS-----------------LLHLDTLQFLPNW 40

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           E     + R   ++  ++  L E    ++ D    SS  Y+   + +  +   +      
Sbjct: 41  E----MSDRSW-MQEQVKTFLNENLSWVI-D-GNYSSCCYEERMEQADQIIFLNFSRW-- 91

Query: 126 QEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHE---------KRRQ 175
                DC +          KR  +NR  +R S      E+ D                R+
Sbjct: 92  -----DCLL-------RAAKRYSKNRGKVRGSMAQGCPEKFDWEFIRWILLDGRTANIRK 139

Query: 176 IFLDIARNQPDRCHIV 191
            +  + +  P +  ++
Sbjct: 140 RYEKLQKMYPYKFIVL 155


>gi|315604551|ref|ZP_07879614.1| signal recognition particle protein [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313563|gb|EFU61617.1| signal recognition particle protein [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 527

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L ++L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGKWLREEGKTVLLV 134


>gi|311279649|ref|YP_003941880.1| hypothetical protein Entcl_2344 [Enterobacter cloacae SCF1]
 gi|308748844|gb|ADO48596.1| protein of unknown function DUF344 [Enterobacter cloacae SCF1]
          Length = 272

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 31/117 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG +GAGK   I  +   +  + + V     P     ++                  
Sbjct: 51  IVFEGRDGAGKGGTIKAITERVSPRVFRVVALPAPTEREKSQL----------------- 93

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                      +++  IR     G+I++ DR   S Y   G          + +++ 
Sbjct: 94  -----------YLQRYIRHLPAAGEIVIFDR---SWYNRAGVERVMGFCTEEQVEKF 136


>gi|300869182|ref|ZP_07113778.1| daunorubicin resistance ABC transporter ATPase subunit
           [Oscillatoria sp. PCC 6506]
 gi|300332831|emb|CBN58976.1| daunorubicin resistance ABC transporter ATPase subunit
           [Oscillatoria sp. PCC 6506]
          Length = 340

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 69/222 (31%), Gaps = 60/222 (27%)

Query: 11  GIEGAGKTTHISLLKR-------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT +  L          L+     V              A+ V L   +    
Sbjct: 37  GPNGAGKTTTLRALCTLTAPDRGRLEVSGISVIEQPRLARQRLGYVAQEVALDKVLTGR- 95

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF------L 117
              E +   AA       +I+           DR +D + A  G  + +          +
Sbjct: 96  ---ELLQLQAALYHLPRPMIK-----------DR-IDRAIALLGLGEWADKKTGTYSGGI 140

Query: 118 DSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ- 175
               +++   +  PD  ++LD    +GL  +++R  +                  + R+ 
Sbjct: 141 RKRLDLAAGLLHQPD-VLVLD-EPTVGLD-IESRVVV-------------WDFLRQLRES 184

Query: 176 --------IFLDIARNQPDRCHIVD-----SAHSFQSVATNI 204
                    +L+      +R  I+D     +A + + +   +
Sbjct: 185 GTTVLITSHYLEEVDALANRVAIIDKGVVIAAGTPEELKDKV 226


>gi|291542063|emb|CBL15173.1| Shikimate kinase [Ruminococcus bromii L2-63]
          Length = 169

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 37/149 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I   G+ G+GK+T   LL + L    Y            A +  + +L + G+D
Sbjct: 1   MKN---IVLIGMPGSGKSTVGVLLAKAL---GYSFVDVDLIICKEAGKPLQKILDNEGLD 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                     F      H+E  I   L   K ++                 S  L  +++
Sbjct: 55  ---------FFL-----HLEGKIGAELDYDKTVI-------------ATGGSMVLSENAM 87

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN 149
           + +          + +D+ +D   +RV N
Sbjct: 88  ENLRKNG----KVVFIDVDLDEIKRRVTN 112


>gi|283479692|emb|CAY75608.1| Twitching motility protein [Erwinia pyrifoliae DSM 12163]
          Length = 330

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  G+GK+T ++ L   + ++     +T E        +A+ ++      +    
Sbjct: 121 LILITGATGSGKSTTLAALIDEINQRQRRHILTLEDPVEFLHHSAQSLIQQREKGQHFTR 180

Query: 66  AEAIVFAAARLD 77
            EA + AA R D
Sbjct: 181 FEAGLRAALRED 192


>gi|227517280|ref|ZP_03947329.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus faecalis TX0104]
 gi|227075287|gb|EEI13250.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Enterococcus faecalis TX0104]
          Length = 173

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G  ISF G  GAGK+T + ++ 
Sbjct: 24 IDKGKLISFVGPNGAGKSTLLKIIA 48


>gi|167837238|ref|ZP_02464121.1| adenylylsulfate kinase [Burkholderia thailandensis MSMB43]
          Length = 200

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 20/87 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGKTT  + L   L                         +L       G  A+   
Sbjct: 20 GLPGAGKTTTANALLNRLIEGGAKAV-----------------VLDGDALRAGLCADLGF 62

Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94
            A RL+++     V +    EG +++
Sbjct: 63 SDADRLENIRRFAHVAKLFQREGYVVI 89


>gi|163839865|ref|YP_001624270.1| conjugal transfer protein [Renibacterium salmoninarum ATCC 33209]
 gi|162953341|gb|ABY22856.1| conjugal transfer protein [Renibacterium salmoninarum ATCC 33209]
          Length = 214

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
             +  EG  G+GKTT ++  K  L+ K   + V 
Sbjct: 96  RLVVVEGAAGSGKTTVLAAAKTGLEVKGRSMVVV 129


>gi|153009307|ref|YP_001370522.1| adenylate kinase [Ochrobactrum anthropi ATCC 49188]
 gi|166980342|sp|A6X0D9|KAD_OCHA4 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|151561195|gb|ABS14693.1| adenylate kinase [Ochrobactrum anthropi ATCC 49188]
          Length = 194

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 66/222 (29%), Gaps = 61/222 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   LL    ++       T         +  R  +      E G  A+A++
Sbjct: 7   GPPGAGKGTQAGLLT---KKHGIPQLST--------GDMLRAAV--AQQSEIGKRAKAVM 53

Query: 71  FAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   V + I           P    G   + D +  +    Q              
Sbjct: 54  ---DAGQLVSDEIVNQIVSERIDAPDCANGF--ILDGYPRTVPQAQALG----------- 97

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEK 172
             ++ + +  D  I L +  +  +KR+++R          +R     + F ++ V   EK
Sbjct: 98  TMLAGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREK 157

Query: 173 R------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                       ++         +++     + V   I  I+
Sbjct: 158 TSPLSSYYAGTGEL--------RVINGMAPVEEVTAEIERIL 191


>gi|119947223|ref|YP_944903.1| uridine kinase [Psychromonas ingrahamii 37]
 gi|119865827|gb|ABM05304.1| predicted uridine kinase [Psychromonas ingrahamii 37]
          Length = 219

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 30/86 (34%), Gaps = 8/86 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  GIEG GK      +   L  +   V V        AAE  R        +   +  
Sbjct: 30  IAISGIEGGGKRALSEKIANALTLEGVRVAVIH-TDDWEAAENVR-------FNVMSSPE 81

Query: 67  EAIVFAAARLDHVENVIRPALMEGKI 92
           E  + A    +  E +I P  + G I
Sbjct: 82  EYYLNAYRFDEMFEQLILPLKLFGSI 107


>gi|15672477|ref|NP_266651.1| deoxynucleoside kinase [Lactococcus lactis subsp. lactis Il1403]
 gi|12723377|gb|AAK04593.1|AE006285_1 deoxynucleoside kinase [Lactococcus lactis subsp. lactis Il1403]
          Length = 217

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 28/160 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK++   +L   L+ +                                 +  A +   
Sbjct: 11  GAGKSSLTEMLAEELKTQ----AFYESVDDNKVLPLFYE----------NPQKYAFLLQI 56

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSLQEISVQE 127
             L+   + I+ AL +   +L DR  + DS      A  G  D ++    D L    ++E
Sbjct: 57  YFLNKRFDSIKRALSDNNNVL-DRSIYEDSLLFHLNADLGRADETEVEVYDDLLNNMLEE 115

Query: 128 V-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +        PD  I + +  D  L+R++ R    E    D
Sbjct: 116 IDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYD 155


>gi|189345850|ref|YP_001942379.1| guanylate kinase [Chlorobium limicola DSM 245]
 gi|189339997|gb|ACD89400.1| Guanylate kinase [Chlorobium limicola DSM 245]
          Length = 192

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 64/216 (29%), Gaps = 37/216 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60
            G  I F    G GK+T    +   +   ++ V  T         E   +  L       
Sbjct: 7   KGKLIVFSAPSGTGKSTIAKAVLGQIGELSFSVSATTRSKRPGEEEGVHYFFLDKKEFEE 66

Query: 61  --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
             E G   E   F       + +  R A+  G+ LL D                    LD
Sbjct: 67  RIEKGDFIEYEYFFGNYYGTLLDKTREAIDSGRHLLLD--------------------LD 106

Query: 119 SLQEISVQEVMP-DCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
               ++++++ P D  ++   P    +  +R+  R         +  ER  + +      
Sbjct: 107 VKGALNLKKLFPLDSLLLFIRPPSMAVLQERLLQR-DGNSPGLQERLERAALEL------ 159

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            +   A    D     D   +  +V   I   +  L
Sbjct: 160 GY---AEQFDDVVVNDDLEQTVTAVTGKIRKYLTTL 192


>gi|332138141|pdb|3MRS|A Chain A, Crystal Structure Of Shikimate Kinase Mutant (R57a) From
           Helicobacter Pylori
          Length = 168

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 17  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFA------MFEK 67

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  ++L+ +         T
Sbjct: 68  NLIDELKTLKTP------HVIST--------------GGGIVMHENLKGLGT-------T 100

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+ N+    +   L+   +   +  EKR+ ++   A        I+D+
Sbjct: 101 FYLKMDFETLIKRL-NQKEREKRPLLNNLTQAKELF-EKRQALYEKNAS------FIIDA 152

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 153 RGGLNNSLKQVLQFI 167


>gi|319949721|ref|ZP_08023750.1| gluconokinase [Dietzia cinnamea P4]
 gi|319436611|gb|EFV91702.1| gluconokinase [Dietzia cinnamea P4]
          Length = 189

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 44/207 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   G+ GAGK+T    +      +  D    H  R      A E           D+  
Sbjct: 20  IVVMGVSGAGKSTVARAIADRAGAELVDADDLHPPRNIRKLAAGEPL-------ADDDRW 72

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+       DH      PA   G ++ C               + +  + D L+E+
Sbjct: 73  PWLEAVRDRMRHHDHSRGPEAPAPDRGLVVAC--------------SALRRAYRDVLREV 118

Query: 124 SVQEVMPDCTII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
                 P       L    ++   R+  R   R     D      V+  E        +A
Sbjct: 119 ----RRP--VFFVELGTDPELIAARLAAR---RGHFASDRILESQVLTLE-------PLA 162

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
            ++      +  +     +A ++L  +
Sbjct: 163 ADEYGMLCPI--SQPADEIAEDVLAAL 187


>gi|317180780|dbj|BAJ58566.1| guanylate kinase [Helicobacter pylori F32]
          Length = 206

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 1   MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57
           M++   L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S 
Sbjct: 1   MHNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
              + G E    +  A   +H        +  AL EGKI++ D
Sbjct: 59  EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|306830732|ref|ZP_07463896.1| deoxyguanosine kinase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427079|gb|EFM30187.1| deoxyguanosine kinase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 212

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 55/163 (33%), Gaps = 29/163 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GKTT+ SLL + L           EP            +L    +      
Sbjct: 2   IILAGMIGVGKTTYTSLLAKEL---GTTAFF--EPVDNNP-------ILDKYYEAPEKYG 49

Query: 67  EAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQ----HL 115
            A+ ++   +       I+ A      +L DR  + D+ + Y    QG     +      
Sbjct: 50  FALQIYFLNKR---FKAIKKAYDTDNNVL-DRSIYEDALFTYINTLQGSISEQEYKIYLE 105

Query: 116 FLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRES 156
            LD++ E         PD  I L+   D  +  ++ R    E 
Sbjct: 106 LLDNMMEEIDGLPKKSPDLLIYLEGSFDHIMNNIKKRGRDFEQ 148


>gi|301300338|ref|ZP_07206543.1| dephospho-CoA kinase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852074|gb|EFK79753.1| dephospho-CoA kinase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 201

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 38/214 (17%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVH-------VTREPGGTPAAEA----ARHVLLS 56
           G+ G   +GKTT       +L+   Y +           EP      E        +L S
Sbjct: 5   GLTGGIASGKTTVS----TYLKEMGYPIIDADKVSRKVVEPHTEGLKEISHFFGNDILQS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G        E +     + + +  ++   +      + D+       Y+ +      L 
Sbjct: 61  DGSLNRKKLGEIVFENKDKRELLNKILSKKIRTE---IIDQIEY----YKKQGADVLILD 113

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L E    ++  D T+++ +P ++ ++R+  R  L     L     +           
Sbjct: 114 IPLLFEGGYDKMC-DFTMVIYIPKELQIERLIQRDGLTRDKALKRISAQ----------- 161

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            LD A        ++D++ S +     ++  +  
Sbjct: 162 -LDSAERNSKADIVIDNSRSIEDTHNQVIEWLER 194


>gi|295396758|ref|ZP_06806896.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970392|gb|EFG46329.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Brevibacterium mcbrellneri ATCC 49030]
          Length = 265

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          G  GAGKTT I +L   L+ +  D+ +    G        R 
Sbjct: 43 GPNGAGKTTLIEILATVLRAQRGDISLVSSKGSISIKNDVRR 84


>gi|292489328|ref|YP_003532215.1| Dephospho-CoA kinase [Erwinia amylovora CFBP1430]
 gi|292898448|ref|YP_003537817.1| dephospho-CoA kinase [Erwinia amylovora ATCC 49946]
 gi|291198296|emb|CBJ45402.1| dephospho-CoA kinase [Erwinia amylovora ATCC 49946]
 gi|291554762|emb|CBA22556.1| Dephospho-CoA kinase [Erwinia amylovora CFBP1430]
 gi|312173493|emb|CBX81747.1| Dephospho-CoA kinase [Erwinia amylovora ATCC BAA-2158]
          Length = 203

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 51/233 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------VTREPGGTPAA----EAARHVLL 55
           ++  G  G+GK+T  +L          D+           EPG    A         +L+
Sbjct: 5   VALTGGIGSGKSTIANL----FAGLGVDIIDADVIARQVVEPGQPALAAIHTHFGDEILM 60

Query: 56  -SCGVDEFGAEAEAIVFAAARLDHVENVIRPALM---EGKILLCDRFLDSSYAYQGERDS 111
               ++      +    AA +   V N++ P +    + ++ L  R +   +        
Sbjct: 61  PDGTLNRADLRNKIFSSAADKRW-VNNLLHPLIHSRTQQQLALA-RSVWCLWV------- 111

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              L  + LQ  +      D  +++D+       R        E   +   + + ++  +
Sbjct: 112 VPLLVENHLQHHA------DRVLLVDVD------RATQIVRTTERDNISREQVEHILAAQ 159

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             R+  L +A +      I+D+  S ++V   +       + +R + L++  D
Sbjct: 160 ATREARLAVADD------IIDNCGSPETVIARVAE-----LNERYTALAAATD 201


>gi|251781224|ref|ZP_04824140.1| ferrichrome transport ATP-binding protein FhuC [Clostridium
          botulinum E1 str. 'BoNT E Beluga']
 gi|243081671|gb|EES47732.1| ferrichrome transport ATP-binding protein FhuC [Clostridium
          botulinum E1 str. 'BoNT E Beluga']
          Length = 251

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60
            ISF G  GAGK+T +S++ R  ++     V  T+E       + +R + +L    +
Sbjct: 28 KIISFIGPNGAGKSTLLSMISRLAKKDSGEVVIDTKELSTWQDKDLSRTISILKQNNN 85


>gi|229071162|ref|ZP_04204388.1| hypothetical protein bcere0025_33360 [Bacillus cereus F65185]
 gi|229191739|ref|ZP_04318716.1| hypothetical protein bcere0002_33990 [Bacillus cereus ATCC 10876]
 gi|228591733|gb|EEK49575.1| hypothetical protein bcere0002_33990 [Bacillus cereus ATCC 10876]
 gi|228712102|gb|EEL64051.1| hypothetical protein bcere0025_33360 [Bacillus cereus F65185]
          Length = 195

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 8   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 57  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L ++  +    D    LD+
Sbjct: 113 ELYKL--RACRSDVIFYLDV 130


>gi|259909614|ref|YP_002649970.1| twitching motility family protein [Erwinia pyrifoliae Ep1/96]
 gi|224965236|emb|CAX56768.1| twitching motility family protein [Erwinia pyrifoliae Ep1/96]
          Length = 335

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  G+GK+T ++ L   + ++     +T E        +A+ ++      +    
Sbjct: 126 LILITGATGSGKSTTLAALIDEINQRQRRHILTLEDPVEFLHHSAQSLIQQREKGQHFTR 185

Query: 66  AEAIVFAAARLD 77
            EA + AA R D
Sbjct: 186 FEAGLRAALRED 197


>gi|221502210|gb|EEE27948.1| ATP-binding cassette, putative [Toxoplasma gondii VEG]
          Length = 1005

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG F+   G  G+GK+T  +LL R  + +  ++     P G+  ++  R ++        
Sbjct: 753 SGAFLGILGPSGSGKSTLAALLLRLYEPEEGEIRFNNTPIGSLDSQFVRSLI-------- 804

Query: 63  GAEA-EAIVFAAARLDHVE 80
                E ++ A +  ++VE
Sbjct: 805 SPVTQENLLLAKSVRENVE 823


>gi|269861026|ref|XP_002650229.1| guanylate kinase [Enterocytozoon bieneusi H348]
 gi|220066359|gb|EED43844.1| guanylate kinase [Enterocytozoon bieneusi H348]
          Length = 192

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59
          M   +FI+  G  G+GKTT I  L         ++  T R+P          + L     
Sbjct: 1  MLKNIFIT--GASGSGKTTVIKYLLNKFPTTYLNISYTSRKPRKNEIHGKDYYFLTEEEF 58

Query: 60 DEFGAEAEAI 69
          ++     E +
Sbjct: 59 EQKIKNGELL 68


>gi|188577847|ref|YP_001914776.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522299|gb|ACD60244.1| CysN/CysC bifunctional enzyme required for AvrXa21 activity Q
           (raxQ) [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 598

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+ + L    Y                    +L       G   + 
Sbjct: 433 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 475

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V R     G I+L      S  +             D  + +  
Sbjct: 476 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 529

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D+P+ +   R
Sbjct: 530 --------VFVDVPLAVAESR 542


>gi|168029678|ref|XP_001767352.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681416|gb|EDQ67843.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 591

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I F G+ G GK+T+++ +  +LQ+ +  V
Sbjct: 388 IVFVGVNGVGKSTNLAKVAYWLQQHDIKV 416


>gi|297583982|ref|YP_003699762.1| guanylate kinase [Bacillus selenitireducens MLS10]
 gi|297142439|gb|ADH99196.1| guanylate kinase [Bacillus selenitireducens MLS10]
          Length = 203

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 28/168 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL I   G  G GK T    L+       Y V   TR P      E   +   S    E
Sbjct: 5   KGLLIVLSGPSGVGKGTVCGALREHDTHIRYSVSATTRSPREGEQ-EGVNYFYKSKEEFE 63

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
                + ++  A  +++        +   + +G  ++ +         QG          
Sbjct: 64  RMIHEDELLEYAQYVENYYGTPRQYVEEMINKGHDVILE------IEVQGA--------- 108

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                + V+E  P+   I  +P D  LK ++NR   R +   +  + +
Sbjct: 109 -----LQVKETFPEGVFIFLMPPD--LKELRNRIEGRGTETKELIDNR 149


>gi|170575589|ref|XP_001893301.1| guanylate kinase [Brugia malayi]
 gi|158600771|gb|EDP37862.1| guanylate kinase, putative [Brugia malayi]
          Length = 196

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 45/203 (22%)

Query: 7   ISFEGIEGAGKTTHI-SLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  G GK+T I   ++ +     + V H TR+P            +     +E   
Sbjct: 4   IVISGPSGGGKSTIITRAMQAYPNAFAFAVSHTTRKPRPGEIDGKNYWFITEKKFNEMIK 63

Query: 65  EAEAIVFAAARLDHVENVIRPALM----EGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + E  +  A    ++    + AL      G I + D                +   + ++
Sbjct: 64  DNE-FLEYATFGGNIYGTSKKALEDISKAGCICILD---------------VELQGVRTI 107

Query: 121 QEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYF----------ERKDVMI 169
            +  +        I++  P ++I  +R++ R +  E +               + +  + 
Sbjct: 108 HKCGLDAKY----ILIRAPSLEILEQRLRARETETEESLKKRMKHAEDDLNAVDAEPTLF 163

Query: 170 --------HEKRRQIFLDIARNQ 184
                    E+    FL   + +
Sbjct: 164 DFVIVNDDFERAYNDFLTAIKEE 186


>gi|160882139|ref|ZP_02063142.1| hypothetical protein BACOVA_00082 [Bacteroides ovatus ATCC 8483]
 gi|260175246|ref|ZP_05761658.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. D2]
 gi|299149314|ref|ZP_07042374.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. 3_1_23]
 gi|315923480|ref|ZP_07919720.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156112480|gb|EDO14225.1| hypothetical protein BACOVA_00082 [Bacteroides ovatus ATCC 8483]
 gi|298512748|gb|EFI36637.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. 3_1_23]
 gi|313697355|gb|EFS34190.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 463

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|86608672|ref|YP_477434.1| excinuclease ABC subunit A [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557214|gb|ABD02171.1| excinuclease ABC, A subunit [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 967

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVL 54
           G  +   G+ G+GK+T +  LL   LQ    + V    E G     E    V+
Sbjct: 654 GKLVCVTGVSGSGKSTLVNELLYPALQHHLGHKVPQPTEMGALEGIEHIDKVI 706


>gi|83320000|ref|YP_424195.1| guanylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|331703220|ref|YP_004399907.1| Guanylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|119371239|sp|Q2SSR8|KGUA_MYCCT RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|83283886|gb|ABC01818.1| guanylate kinase [Mycoplasma capricolum subsp. capricolum ATCC
           27343]
 gi|256383951|gb|ACU78521.1| guanylate kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256384783|gb|ACU79352.1| guanylate kinase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455843|gb|ADH22078.1| guanylate kinase (GMP kinase) [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
 gi|328801775|emb|CBW53928.1| Guanylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 297

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 1   MNSGLFISFEGIEGAGK-TTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M  G  I   G  G GK + +  LL+    R  Y V   TR+P            + +  
Sbjct: 1   MKKGKMIIISGPSGVGKGSVNGELLQNPDLRLKYSVSMTTRKPRNGEINGVNYFFVSNEE 60

Query: 59  VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             +     E I +A    +        +   L +G  ++           + E D +  +
Sbjct: 61  FAKAIVNDELIEYAHFVGNSYGTPRKYVEQELKKGNNVIL----------EIEVDGATQV 110

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +S+  + P+ T       ++   R++ R +  E       ++  + I
Sbjct: 111 LNKEANVLSIFLMPPNLT-------ELA-NRIRGRQTEDEEKIKARLDKALLEI 156


>gi|77552100|gb|ABA94897.1| Adenylyl-sulfate kinase, chloroplast precursor, putative, expressed
           [Oryza sativa Japonica Group]
 gi|125535061|gb|EAY81609.1| hypothetical protein OsI_36778 [Oryza sativa Indica Group]
 gi|125577782|gb|EAZ19004.1| hypothetical protein OsJ_34536 [Oryza sativa Japonica Group]
          Length = 304

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 50/159 (31%), Gaps = 56/159 (35%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G+ G+GK+T    L R L  +    H+T               +L      
Sbjct: 125 QKGCVVWITGLSGSGKSTLACALSRELHSRG---HLTY--------------VLDGDNLR 167

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERD 110
            G   +    A  R +++     V +     G I +         DR             
Sbjct: 168 HGLNKDLSFKAKDRAENIRRVGEVAKLFADAGLICITSLISPYKSDRS------------ 215

Query: 111 SSQHLFLDSLQEISVQEVMPD---CTIILDLPVDIGLKR 146
                        + ++++P+     + L++P+++  +R
Sbjct: 216 -------------ACRKLLPNSSFIEVFLNVPLEVCEER 241


>gi|20091512|ref|NP_617587.1| multidrug ABC transporter, ATP-binding protein [Methanosarcina
           acetivorans C2A]
 gi|19916663|gb|AAM06067.1| multidrug ABC transporter, ATP-binding protein [Methanosarcina
           acetivorans C2A]
          Length = 323

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 67/206 (32%), Gaps = 39/206 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVL 54
             G   SF G  GAGK+T I++L   L       +   +D+    E          + + 
Sbjct: 24  KEGEIFSFLGPNGAGKSTVINVLTTLLPVQKGRARVAGFDLKTEPEKVRESIGIVFQELT 83

Query: 55  LSCGVDEFGAEAEAI----VFAA---ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
           L                  +++    AR + +E +I+   +EGK          +     
Sbjct: 84  LDRD---MTVREILEYHGRLYSMPKVARQERIEELIKLVELEGK--------RDTLTRHF 132

Query: 108 ERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166
                + L      EI+      P   + +D    IGL     +  +R    +    R+ 
Sbjct: 133 SGGMKRRL------EIARGLMTRP-KVLFMD-EPTIGLD---PQTRIRIWEYVKDINREG 181

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVD 192
             I       ++D A    DR  I+D
Sbjct: 182 TTIFLTTH--YMDEADQLSDRISIID 205


>gi|56750701|ref|YP_171402.1| excinuclease ABC subunit A [Synechococcus elongatus PCC 6301]
 gi|81299658|ref|YP_399866.1| excinuclease ABC subunit A [Synechococcus elongatus PCC 7942]
 gi|56685660|dbj|BAD78882.1| excinuclease ABC subunit A [Synechococcus elongatus PCC 6301]
 gi|81168539|gb|ABB56879.1| Excinuclease ABC subunit A [Synechococcus elongatus PCC 7942]
          Length = 1003

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL 54
           G  +   G+ G+GK+T I  LL   L+      V   +        +A   V+
Sbjct: 690 GKLVCITGVSGSGKSTLINELLHPALEHSLGLKVPFPKGLAVLKGTKAIDKVI 742


>gi|42520313|ref|NP_966228.1| guanylate kinase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410051|gb|AAS14162.1| guanylate kinase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 61/209 (29%), Gaps = 34/209 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           G+ +      GAGKTT  + L          V   TR+P            +      E 
Sbjct: 11  GVLLVLSSPSGAGKTTISAKLLEQSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHEL 70

Query: 63  GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + + +A    +      + I   L  G  +L       S  +QG     + +    
Sbjct: 71  CKAGQMLEYAKVFENFYGIPRDFIEQNLSSGISVLL------SIDWQGAFHLFKLMRKKV 124

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +              IL  P    ++ ++ R   R S      ER       +  +   +
Sbjct: 125 VS-----------VFIL--PP--SMEELRLRLQKRNSDDASEIER-------RLAEAQKE 162

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           I++       I++           I +I+
Sbjct: 163 ISKRDKYDYVIIN--DDIDKSVEEISSIL 189


>gi|121583419|ref|YP_973850.1| cobyrinic acid a,c-diamide synthase [Polaromonas naphthalenivorans
           CJ2]
 gi|120596673|gb|ABM40108.1| Cobyrinic acid a,c-diamide synthase [Polaromonas naphthalenivorans
           CJ2]
          Length = 397

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 14  GAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           G GK+T  + L + L  + + V  +  +P G+  +      L+    +    E   +  A
Sbjct: 126 GVGKSTTAATLAQGLSLRGHKVLVIDTDPQGSLTS------LMGVAPETLEDEDTILNVA 179

Query: 73  AARLDHVENVIRPALMEGKILL 94
           +     + + IRP       L+
Sbjct: 180 SGDAQTLADAIRPTYWSNIHLI 201


>gi|295425201|ref|ZP_06817904.1| cell division protein FtsY [Lactobacillus amylolyticus DSM 11664]
 gi|295064977|gb|EFG55882.1| cell division protein FtsY [Lactobacillus amylolyticus DSM 11664]
          Length = 403

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  + +   V +
Sbjct: 206 GVNGAGKTTTIGKLAKRFKDQGKKVIL 232


>gi|294146487|ref|YP_003559153.1| adenylylsulfate kinase [Sphingobium japonicum UT26S]
 gi|292676904|dbj|BAI98421.1| adenylylsulfate kinase [Sphingobium japonicum UT26S]
          Length = 637

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L R N                     LL       G   + 
Sbjct: 474 FTGLSGAGKSTIANLVEKKLARMNRHTF-----------------LLDGDNVRHGLNKDL 516

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R++++     V +     G I++ 
Sbjct: 517 GFTDADRVENIRRVGEVAKLMTDAGLIVIT 546


>gi|257051590|ref|YP_003129423.1| ATPase [Halorhabdus utahensis DSM 12940]
 gi|256690353|gb|ACV10690.1| PilT protein domain protein [Halorhabdus utahensis DSM 12940]
          Length = 633

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
             G+ IS  G  GAGK+T    +  FL   +Y V    +P      
Sbjct: 273 QRGVLIS--GAPGAGKSTFAQAVAEFLSDSDYSVKTMEKPRDLQVG 316


>gi|240104139|ref|YP_002960448.1| hypothetical protein TGAM_2082 [Thermococcus gammatolerans EJ3]
 gi|239911693|gb|ACS34584.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
          Length = 448

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   Y V   R P   P  +  + V+      E   + E  +   
Sbjct: 134 GCGKSQTSRKVAQLLQEMGYKVVAIRHP--MPYGDLRKQVVQRFATFEDLDKYECTIEE- 190

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV---MP 130
                      P +  G ++       +   Y+     ++      L +    +     P
Sbjct: 191 ------REEYEPYIERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFYEP 238

Query: 131 DCTI 134
           D  I
Sbjct: 239 DLWI 242


>gi|237719285|ref|ZP_04549766.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 2_2_4]
 gi|229451145|gb|EEO56936.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 2_2_4]
          Length = 463

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|221118910|ref|XP_002156429.1| PREDICTED: similar to Guanylate kinase, partial [Hydra
          magnipapillata]
          Length = 165

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAAR 51
          +   G  G GK+T I  L      K  + V H TR P         R
Sbjct: 10 VVLSGPSGCGKSTLIKKLTTEFPTKFGFSVSHTTRAPRPNEIDGKGR 56


>gi|251794830|ref|YP_003009561.1| ABC transporter [Paenibacillus sp. JDR-2]
 gi|247542456|gb|ACS99474.1| ABC transporter related [Paenibacillus sp. JDR-2]
          Length = 257

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 3/93 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDE 61
           G   +  G  G+GK+T + +L R +L +    V   +        E AR + ++    + 
Sbjct: 27  GKITTIIGPNGSGKSTLLGVLSRHYLPQSGEAVLGGKAISAYKPRELARKLAVVHQQNEA 86

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
                   + A  RL H  N+  P   E    +
Sbjct: 87  PSDITVEKLVAFGRLPH-RNMWMPGGEEDDAAI 118


>gi|229542247|ref|ZP_04431307.1| deoxynucleoside kinase [Bacillus coagulans 36D1]
 gi|229326667|gb|EEN92342.1| deoxynucleoside kinase [Bacillus coagulans 36D1]
          Length = 222

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 34/183 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           I+  G  G GK+T    L + L  R +++   T        ++  R          +   
Sbjct: 15  ITIAGTVGVGKSTLTRALAKALHFRASFEKVDTNPYLEKFYSDFKR----------WSFH 64

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   F A R        +     G   + DR  + D+    Q   +      +D     
Sbjct: 65  LQIY-FLAERF----KEQKKMFEYGGGFIQDRSIYEDTGIFAQMHYEKGNMSAVDFETYT 119

Query: 124 SVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACL--------DYFERKDV 167
           ++ + M        PD  I L+  ++  L+R++ R    E              +E+   
Sbjct: 120 NLFDAMVMTPYFPHPDLMIYLEGKLENILERIKKRGRSMEQDTPVEYWIEMQRRYEQWID 179

Query: 168 MIH 170
             H
Sbjct: 180 SFH 182


>gi|114327069|ref|YP_744226.1| heme exporter protein A [Granulibacter bethesdensis CGDNIH1]
 gi|122056175|sp|Q0BV49|CCMA_GRABC RecName: Full=Cytochrome c biogenesis ATP-binding export protein
           CcmA; AltName: Full=Heme exporter protein A
 gi|114315243|gb|ABI61303.1| heme exporter protein A [Granulibacter bethesdensis CGDNIH1]
          Length = 258

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64
           ++  G  G+GK+T + LL  F++     V    EP     A+ AR V      D      
Sbjct: 60  VTLIGPNGSGKSTLLRLLAGFVRPAVGTVWWQEEPLPADPADRARIVTYIGHQDAVKPGL 119

Query: 65  -EAEAIVFAA 73
             AE ++F A
Sbjct: 120 TAAENLLFDA 129


>gi|305664594|ref|YP_003860881.1| deoxynucleoside kinase subfamily [Maribacter sp. HTCC2170]
 gi|88708611|gb|EAR00847.1| Deoxynucleoside kinase subfamily, putative [Maribacter sp.
           HTCC2170]
          Length = 204

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 61/198 (30%), Gaps = 36/198 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   LL +  +                  +   +  L    ++   E 
Sbjct: 3   IAVAGNIGAGKTTLTKLLAKHYK------------WEAHFEDVVDNPYLDDFYNQM--ER 48

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY--------QGERDSSQHLF 116
            +       L+H    +      GK ++ DR  + D   AY         G   +     
Sbjct: 49  WSFNLQIYFLNHRYRQVLSFRESGKDIIQDRTIYED---AYIFAPNLHAMGLMTNRDFSN 105

Query: 117 LDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
             SL E+    V  PD  I L   +   + ++  R    E+          +    +  +
Sbjct: 106 YSSLFELMESLVQPPDLLIYLRSSIPNLVSQIHKRGREYENTI-------SIDYLSRLNE 158

Query: 176 IFLDIARN-QPDRCHIVD 192
            +       +  +  IVD
Sbjct: 159 RYEAWIHGYEKGKLLIVD 176


>gi|116491362|ref|YP_810906.1| ABC-type multidrug transport system, ATPase and permease component
           [Oenococcus oeni PSU-1]
 gi|116092087|gb|ABJ57241.1| ABC-type multidrug transport system, ATPase and permease component
           [Oenococcus oeni PSU-1]
          Length = 615

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
            G  I+  G  GAGKTT I+LL+RF
Sbjct: 399 KGQMIAIVGPTGAGKTTIINLLERF 423


>gi|330862600|emb|CBX72753.1| cell division protein ftsY [Yersinia enterocolitica W22703]
          Length = 439

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 284 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGDRNKIAVVAQH-- 339

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 340 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 385


>gi|315637683|ref|ZP_07892888.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478030|gb|EFU68758.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 378

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N  + I FEG + +GK   I  + R++  K+Y V    +P  T          L   +  
Sbjct: 152 NKRMIIIFEGRDASGKGGAIRRITRYMNNKHYRVVALGKPTET----QKNQWFLQRYITH 207

Query: 62  FGAEAEAIVFAAARLDHVENVIRP 85
           F    E ++F   R  +   ++ P
Sbjct: 208 FPTGGEIVLF--DRSWYNRAMVEP 229


>gi|294816089|ref|ZP_06774732.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326444431|ref|ZP_08219165.1| putative ABC transporter ATP-binding protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328688|gb|EFG10331.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 287

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 15/79 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-------------- 48
           +G F++  G  G GK+T + L+   L+    +V +  E    P  +              
Sbjct: 63  AGEFLAIVGPSGCGKSTLLKLVAGLLRPTGGEVSLGGERVHGPRHDIGYVFQRAALLEWR 122

Query: 49  -AARHVLLSCGVDEFGAEA 66
            A R++LL   +     E 
Sbjct: 123 SARRNILLQAEIRGMPKET 141


>gi|226363509|ref|YP_002781291.1| ABC transporter permease/ATP-binding protein [Rhodococcus opacus
           B4]
 gi|226241998|dbj|BAH52346.1| putative ABC transporter permease/ATP-binding protein [Rhodococcus
           opacus B4]
          Length = 648

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 18/106 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ++  G  GAGKTT ++L+ RF +     + +     G   AE +R  L S       
Sbjct: 435 GQMVAIVGPTGAGKTTLVNLILRFYELDGGRILL----DGVDIAEMSRDDLRSRIGMVLQ 490

Query: 64  AEAEAIVF--------AAARLDHVENVIRPALMEGKILLCDRFLDS 101
               A +F        A  R D  E+ I+ A     +   DRF+ S
Sbjct: 491 D---AWLFGGTIRDNIAYGRPDATEDEIQAAARISYV---DRFVHS 530


>gi|268589734|ref|ZP_06123955.1| high-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC
           [Providencia rettgeri DSM 1131]
 gi|291314886|gb|EFE55339.1| high-affinity zinc uptake ABC transporter, ATP-binding protein ZnuC
           [Providencia rettgeri DSM 1131]
          Length = 255

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +N G  ++  G  GAGK+T + ++   L   +  +  TR P         + + L     
Sbjct: 27  LNKGDIVTLLGPNGAGKSTIVRVVLGLLAPTSGTI--TR-PSSLAIGYVPQKLHLDT-TL 82

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME 89
               +   ++   AR +H+     PAL  
Sbjct: 83  PLTVKRFMLLKLGARKEHL----LPALER 107


>gi|217078032|ref|YP_002335750.1| sugar ABC transporter, ATP-binding protein [Thermosipho africanus
          TCF52B]
 gi|217037887|gb|ACJ76409.1| sugar ABC transporter, ATP-binding protein [Thermosipho africanus
          TCF52B]
          Length = 365

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
          N+G FI F G  G GKTT + ++ 
Sbjct: 28 NNGEFIVFLGPSGCGKTTTLRMIA 51


>gi|237832353|ref|XP_002365474.1| ATP-binding cassette, putative [Toxoplasma gondii ME49]
 gi|211963138|gb|EEA98333.1| ATP-binding cassette, putative [Toxoplasma gondii ME49]
          Length = 1005

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG F+   G  G+GK+T  +LL R  + +  ++     P G+  ++  R ++        
Sbjct: 753 SGAFLGILGPSGSGKSTLAALLLRLYEPEEGEIRFNNTPIGSLDSQFVRSLI-------- 804

Query: 63  GAEA-EAIVFAAARLDHVE 80
                E ++ A +  ++VE
Sbjct: 805 SPVTQENLLLAKSVRENVE 823


>gi|218532661|ref|YP_002423477.1| adenylyl-sulfate kinase [Methylobacterium chloromethanicum CM4]
 gi|218524964|gb|ACK85549.1| Adenylyl-sulfate kinase [Methylobacterium chloromethanicum CM4]
          Length = 220

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  + + R L                        ++L       G   +   
Sbjct: 37  GLSGAGKSTVANAVDRALTEAGRST-----------------MVLDGDNLRHGLSRDLGF 79

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            AA R++++       R     G +++      S  +       +            +  
Sbjct: 80  TAADRVENIRRAAETARLMADAGLVVIV-----SLISPFRAERQAAR---------VIAG 125

Query: 128 VMPDCTIILDLPVDIGLKR 146
            +P   + +D P+ +   R
Sbjct: 126 TIPFMEVFIDTPLAVCEAR 144


>gi|85057476|ref|YP_456392.1| hypothetical protein AYWB_196 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789581|gb|ABC65313.1| conserved hypothetical protein [Aster yellows witches'-broom
           phytoplasma AYWB]
          Length = 73

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132
            +   E +I+  L   KI+L DR+L  ++AYQ    +    +      ++ Q + P  
Sbjct: 1   MVQIQEEIIKIYLNTNKIILIDRWLGYNFAYQTYPHNIDKNY-QFFNLLNKQFIKPAL 57


>gi|18976919|ref|NP_578276.1| hypothetical protein PF0547 [Pyrococcus furiosus DSM 3638]
 gi|18892536|gb|AAL80671.1| hypothetical protein PF0547 [Pyrococcus furiosus DSM 3638]
          Length = 448

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 36/124 (29%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   + V   R P   P  +  + V+      E     E  +   
Sbjct: 134 GCGKSQTSRKVAQILQEMGFKVVAVRHP--MPYGDLRKQVVQRFATFEDLDRYECTIEE- 190

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE---VMP 130
                      P L  G ++       +   Y+     ++      L +    +     P
Sbjct: 191 ------REEYEPYLERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFFEP 238

Query: 131 DCTI 134
           D  I
Sbjct: 239 DLWI 242


>gi|327353699|gb|EGE82556.1| hypothetical protein BDDG_05500 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 1390

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
           +G  I+  G  G GK+T ++LL+R+
Sbjct: 503 AGKIIALVGPSGCGKSTIVALLERW 527


>gi|322833741|ref|YP_004213768.1| ABC transporter [Rahnella sp. Y9602]
 gi|321168942|gb|ADW74641.1| ABC transporter related protein [Rahnella sp. Y9602]
          Length = 314

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          M  G F    G  G+GK+T + ++ R ++    ++    EP     A+  R 
Sbjct: 24 MAKGEFTVLIGTSGSGKSTTLKMINRLVEHDRGEILFAGEPIEKFRAQDLRR 75


>gi|320333661|ref|YP_004170372.1| sulfate-transporting ATPase [Deinococcus maricopensis DSM 21211]
 gi|319754950|gb|ADV66707.1| Sulfate-transporting ATPase [Deinococcus maricopensis DSM 21211]
          Length = 309

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 29/212 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISL-LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            +G  ++  G  GAGKTT ISL L +      +      +P           +L    + 
Sbjct: 42  RTGELVALLGPNGAGKTTAISLMLGQVQPDAGHVQIFGADPRAAHVRARIGAMLQDVALP 101

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDS 119
           +  +  E +  AAA         RP  ++  + L D R    + A       S       
Sbjct: 102 DGLSVRELLTLAAALYP------RPLGVDAALDLADLR----AQANMRAGRLSGGQTRRL 151

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--HEKRRQIF 177
              +++    PD  + LD    + +  VQ+R +            + V++  H      +
Sbjct: 152 SFALAIVG-DPD-VLFLD-EPTVAMD-VQSREAFWNGVHALRARGRTVLLTTH------Y 201

Query: 178 LDIARNQPDRCHIVDSAH-----SFQSVATNI 204
           L+ A    DR  ++++       +  +V  ++
Sbjct: 202 LEEADRAADRIVVMNAGRVVADGTPAAVRASV 233


>gi|326771786|ref|ZP_08231071.1| signal recognition particle protein [Actinomyces viscosus C505]
 gi|326637919|gb|EGE38820.1| signal recognition particle protein [Actinomyces viscosus C505]
          Length = 561

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L R+L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGRWLRDQGKRVLLV 134


>gi|300812408|ref|ZP_07092838.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496575|gb|EFK31667.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 229

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
            G  ++  G  GAGKTT I+LL+RF   K   +++  +   + + E  R 
Sbjct: 118 KGEMVAIVGPTGAGKTTIINLLERFYDVKGGQIYLDGQETRSMSREDLRS 167


>gi|293552906|ref|ZP_06673562.1| sulfate/thiosulfate import ATP-binding protein CysA [Enterococcus
          faecium E1039]
 gi|291602927|gb|EFF33123.1| sulfate/thiosulfate import ATP-binding protein CysA [Enterococcus
          faecium E1039]
          Length = 217

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N G  I F G  G+GK+T + L+   L
Sbjct: 29 NKGEVIVFSGPSGSGKSTLLKLIGTLL 55


>gi|291542685|emb|CBL15795.1| ATPase components of various ABC-type transport systems, contain
           duplicated ATPase [Ruminococcus bromii L2-63]
          Length = 886

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 7/76 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREP----GGTPAAEAARHVL 54
           N G FI+  G  G GK+T +  LK  L        ++    +P         +     V+
Sbjct: 29  NEGEFITVCGPSGCGKSTLLRHLKPDLSPHGVLSGEIFFEEKPISDLSHREQSSKIGFVM 88

Query: 55  LSCGVDEFGAEAEAIV 70
            S        +    +
Sbjct: 89  QSPENQIVTDKVWHEL 104


>gi|284931044|gb|ADC30982.1| putative ABC-type sn-glycerol-3-phosphate transport system
          ATP-binding protein [Mycoplasma gallisepticum str. F]
          Length = 577

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            G  ++F G  G GKTT ++ +   L
Sbjct: 55 KKGKLVTFLGPSGCGKTTTLNAIAGLL 81


>gi|294881687|ref|XP_002769447.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|294945126|ref|XP_002784567.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239872906|gb|EER02165.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897666|gb|EER16363.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 192

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 62/214 (28%), Gaps = 44/214 (20%)

Query: 11  GIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  GAGK T   L+++            +   R   G+   +     +    +       
Sbjct: 10  GGPGAGKGTQCDLIEKEFGFMHLSAGDLLREERNREGSEYGDLIEKYIREGAIVPVEITV 69

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             +  A  + D            GK L+ D F  +     G          +        
Sbjct: 70  NLLKRAMEKRD---------WEHGKFLI-DGFPRNEDNLDGWERVLGGKVDEKFC----- 114

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-ARNQP 185
                  +  D P D+  KR+ +R         D  E          R+ F    A  +P
Sbjct: 115 -------LFFDCPEDVMEKRLLSRGKT-SGRSDDNLES--------IRKRFRTYEAETRP 158

Query: 186 --DRC------HIVDSAHSFQSVATNILNIVWEL 211
             +R         V++  S   V +++ +I  ++
Sbjct: 159 IIERFKAKGKERRVNADRSVDEVWSDVKDIFEKI 192


>gi|255711937|ref|XP_002552251.1| KLTH0C00528p [Lachancea thermotolerans]
 gi|238933630|emb|CAR21813.1| KLTH0C00528p [Lachancea thermotolerans]
          Length = 282

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 40/212 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           G  GAGK T  + L R  Q         +   +    +   E  +H +    +       
Sbjct: 100 GGPGAGKGTQCANLVRDFQFVHLSAGDLLRAEQNRSNSKYGELIKHYIKEGLIVP-QEVT 158

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            A++         +  I+ +  +G+     RFL       G         +   +EI   
Sbjct: 159 VALL---------KQAIQESYEKGQ----KRFLVD-----GFPRKMDQA-VTFEEEIVPS 199

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IAR 182
           +     T+  D P  + LKR+  R   + S   D     +V   +KR + F+D    + +
Sbjct: 200 KF----TLFFDCPESVMLKRLLERG--KTSGRSD----DNVESIKKRFKTFIDTSMPVVK 249

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIVWELV 212
              +  +   V   H    V   +   V + +
Sbjct: 250 HFEEQGKVVTVSCDHDMNEVYNQVKAAVKDKI 281


>gi|256073680|ref|XP_002573157.1| mannosidase endo-alpha [Schistosoma mansoni]
 gi|238658330|emb|CAZ29389.1| mannosidase, endo-alpha, putative [Schistosoma mansoni]
          Length = 598

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 35/97 (36%), Gaps = 11/97 (11%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP-----GGTPAAEAARHVLLSC-GV 59
            F G  GAGK+T + +L         + V H TR+P      G       R   L+    
Sbjct: 8   VFTGPSGAGKSTLLQMLLEKFPNSFGFSVSHTTRKPRPGERDGVDYHFTDRDTFLNEVSQ 67

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            +F   AE   FA          +   L  G+I + D
Sbjct: 68  RKFLEYAE---FAGNFYGTSRLAVESVLNGGRICILD 101


>gi|197286090|ref|YP_002151962.1| adenylyl-sulfate kinase [Proteus mirabilis HI4320]
 gi|227356600|ref|ZP_03840987.1| adenylyl-sulfate kinase [Proteus mirabilis ATCC 29906]
 gi|194683577|emb|CAR44456.1| adenylyl-sulfate kinase [Proteus mirabilis HI4320]
 gi|227163356|gb|EEI48283.1| adenylyl-sulfate kinase [Proteus mirabilis ATCC 29906]
          Length = 204

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 36/169 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  + F G+ G+GK+T    L++ L               +      R  LL      
Sbjct: 25  HKGCVLWFTGLSGSGKSTLADALEQTL------------YQYSTLHAPIRTYLLDGDNLR 72

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +       R +++     V +  +  G I+L      S   YQ +R   +     
Sbjct: 73  HGLCHDLGFSEQDRHENIRRVGEVAKLMVDAGLIVLTA--FISP--YQQDRQQVR----- 123

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
             +  +         I +D P+ +   R          R  +++ + +D
Sbjct: 124 --ERFAQGRF---IEIFVDTPLALCEARDPKGLYQKARRGEIKQFSGID 167


>gi|193216691|ref|YP_001999933.1| signal recognition particle [Mycoplasma arthritidis 158L3-1]
 gi|193002014|gb|ACF07229.1| signal recognition particle [Mycoplasma arthritidis 158L3-1]
          Length = 441

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 27/137 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDEFGAEAE 67
           G++G+GKTT  + L  F ++K     + + P   G      AAR  L     ++   + +
Sbjct: 106 GLQGSGKTTTAAKLATFFKKK----KLCQNPLLVGDDIYRPAAREQL-----EQLAKQTQ 156

Query: 68  AIVFAAARLDHV---ENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              F   + D +   +  I+ A      +++ D            R +     +D L  I
Sbjct: 157 TDFFTKEKNDAIFIAKEAIKRANDNRNDLVIVD---------TAGRLAIDENLMDELINI 207

Query: 124 SVQEVMPDCTIILDLPV 140
             + + PD  I+L +  
Sbjct: 208 -KKAIHPDY-ILLVVDA 222


>gi|163787059|ref|ZP_02181506.1| guanylate kinase [Flavobacteriales bacterium ALC-1]
 gi|159876947|gb|EDP71004.1| guanylate kinase [Flavobacteriales bacterium ALC-1]
          Length = 196

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 6/101 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
             G  I F    G+GKTT +  L  +  L  +      +RE  G        + L     
Sbjct: 8   KQGKLIVFSAPSGSGKTTIVRHLLKQSELNLEFSISATSREARGNEQNGKDYYYLSLKEF 67

Query: 60  DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96
                  E +    V+       +++ I     +GK ++ D
Sbjct: 68  KNKIKNDEFLEWEEVYRDNFYGTLKSEIERIWAKGKHVIFD 108


>gi|160935045|ref|ZP_02082431.1| hypothetical protein CLOLEP_03921 [Clostridium leptum DSM 753]
 gi|156866498|gb|EDO59870.1| hypothetical protein CLOLEP_03921 [Clostridium leptum DSM 753]
          Length = 204

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 60/201 (29%), Gaps = 49/201 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTRE---PGGTPAAEAARH- 52
           M   L I   G  G+GK+T    + + L+     V     + RE   PG     E  R  
Sbjct: 1   MTEPLIIGLTGPTGSGKST----VAQSLEEAGCVVIDADKIAREVVAPGAPALKELQREF 56

Query: 53  ---VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPAL-------------MEGKILLCD 96
              +L   G       A     +  +   +  +  P +                K+++ D
Sbjct: 57  GDTILDDYGNLRRHTLANLAFSSLEKTKRLNEITHPHILRKMKENIEECRQKRKKVVVLD 116

Query: 97  RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
                          +  LF   L+ I         T+ +  P +  L+RV  R S+   
Sbjct: 117 ---------------APLLFEAGLERICT------VTLAVLAPREQRLQRVMARDSITRE 155

Query: 157 ACLDYFERKDVMIHEKRRQIF 177
                   +    + K R  +
Sbjct: 156 EAEKRMSAQQQDQYYKDRSDY 176


>gi|55379915|ref|YP_137765.1| corrinoid ABC transporter ATPase [Haloarcula marismortui ATCC
           43049]
 gi|55232640|gb|AAV48059.1| iron (III) ABC transporter ATP-binding protein [Haloarcula
           marismortui ATCC 43049]
          Length = 423

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGKTT +  +K  L      V V  EP    +A+A   ++ S        +  A+ 
Sbjct: 53  GPNGAGKTTVLRAVKGTLNPDTGTVRVDGEPISNRSAKAVSRLVAS------TPQGTALS 106

Query: 71  FAAARLDHVENVIRPALME 89
           F  +    VE    P L  
Sbjct: 107 FDFSVRQTVEMGRTPHLGR 125


>gi|56476189|ref|YP_157778.1| cell division protein FtsY [Aromatoleum aromaticum EbN1]
 gi|56312232|emb|CAI06877.1| Cell division protein FtsY [Aromatoleum aromaticum EbN1]
          Length = 386

 Score = 36.9 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           +S   I   G+ G+GKTT I  L ++ Q +   V +
Sbjct: 176 HSPYIIMIAGVNGSGKTTSIGKLAKYFQAQGRSVLL 211


>gi|313665136|ref|YP_004047007.1| guanylate kinase [Mycoplasma leachii PG50]
 gi|312949395|gb|ADR23991.1| guanylate kinase [Mycoplasma leachii PG50]
          Length = 297

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 23/174 (13%)

Query: 1   MNSGLFISFEGIEGAGK-TTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M  G  I   G  G GK + +  LL+    R  Y V   TR+P            + +  
Sbjct: 1   MKKGKMIIISGPSGVGKGSVNGELLQNPDLRLKYSVSMTTRKPRNDEINGVNYFFVSNEE 60

Query: 59  VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             +     E I +A    +        +   L +G  ++           + E D +  +
Sbjct: 61  FAKAIVNDELIEYAHFVGNSYGTPRKYVEQELKKGNNVIL----------EIEVDGATQV 110

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +S+  + P+ T       ++   R++ R +  E       ++  + I
Sbjct: 111 LNKEANVLSIFLMPPNLT-------ELA-NRIRGRQTEDEEKIKARLDKALLEI 156


>gi|307328051|ref|ZP_07607232.1| adenylate kinase [Streptomyces violaceusniger Tu 4113]
 gi|306886356|gb|EFN17361.1| adenylate kinase [Streptomyces violaceusniger Tu 4113]
          Length = 218

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 57/158 (36%), Gaps = 31/158 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60
           I   G  GAGK T  + L   L         T +        GTP  + A+  + +    
Sbjct: 3   IVLVGPPGAGKGTQAAYLAEKLS---IPHISTGDLFRANISQGTPLGKQAQEYMRAG--- 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   +   I  A  RLD      +P    G   L D F          R+  Q   LD+ 
Sbjct: 57  QLVPDEVTIAMAEDRLD------QPDAQSGF--LLDGF---------PRNLVQAEALDA- 98

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
             ++ + V  D  + L++P    +KR+  R + R  + 
Sbjct: 99  -YLAERGVSLDAVLDLEVPESEVIKRIAGRRTCRNDSS 135


>gi|293368979|ref|ZP_06615580.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          ovatus SD CMC 3f]
 gi|292635999|gb|EFF54490.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          ovatus SD CMC 3f]
          Length = 463

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|291550941|emb|CBL27203.1| guanylate kinase [Ruminococcus torques L2-14]
          Length = 211

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 27/169 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59
             G+ I   G  GAGK T +  L R             TR P            L     
Sbjct: 3   KKGILIVVSGFSGAGKGTLMKELMRKYPENYALSISATTRGPRDGEVDGREYFFLSREKF 62

Query: 60  DEFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++  A  E I +A    ++       +   L EGK ++ +         QG         
Sbjct: 63  EKMIANNELIEYAKYVENYYGTPRAYVEKMLDEGKDVILE------IEIQGA-------- 108

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                 + V+E  PD T+++ +      + +++R   R +  ++  E +
Sbjct: 109 ------LKVKEKFPD-TLLMFVTPPNARE-LKSRLVGRGTETMEVIESR 149


>gi|290474029|ref|YP_003466903.1| putative ABC transporter ATP-binding protein [Xenorhabdus
          bovienii SS-2004]
 gi|289173336|emb|CBJ80113.1| putative transport protein (ABC superfamily, atp_bind)
          [Xenorhabdus bovienii SS-2004]
          Length = 578

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          G +GAGKTT I +L   L+  N ++ + 
Sbjct: 42 GPDGAGKTTLIRMLAGLLKPDNGNIKIM 69


>gi|294660204|ref|NP_852816.2| putative sn-glycerol-3-phosphate ABC transporter ATP-binding
          protein [Mycoplasma gallisepticum str. R(low)]
 gi|284811854|gb|AAP56384.2| putative ABC-type sn-glycerol-3-phosphate transport system
          ATP-binding protein [Mycoplasma gallisepticum str.
          R(low)]
          Length = 577

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            G  ++F G  G GKTT ++ +   L
Sbjct: 55 KKGKLVTFLGPSGCGKTTTLNAIAGLL 81


>gi|282866374|ref|ZP_06275419.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces sp. ACTE]
 gi|282558770|gb|EFB64327.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces sp. ACTE]
          Length = 320

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCG---VDEFGAEA 66
           G  GAGKTT + +L   L+     V V        AAE  R + LL       +E G   
Sbjct: 37  GPNGAGKTTAVRILSTLLRPDGGRVEVAGFDVRDEAAEVRRRIGLLGQHAAVDEELGGRQ 96

Query: 67  EAIVFAAARLDHV 79
              +F   RL H+
Sbjct: 97  NLEMF--GRLHHL 107


>gi|269960885|ref|ZP_06175255.1| adenylylsulfate kinase [Vibrio harveyi 1DA3]
 gi|269834325|gb|EEZ88414.1| adenylylsulfate kinase [Vibrio harveyi 1DA3]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|238854559|ref|ZP_04644895.1| Gmk, Guanylate kinase [Lactobacillus jensenii 269-3]
 gi|282932636|ref|ZP_06338051.1| Gmk, guanylate kinase [Lactobacillus jensenii 208-1]
 gi|238832820|gb|EEQ25121.1| Gmk, Guanylate kinase [Lactobacillus jensenii 269-3]
 gi|281303240|gb|EFA95427.1| Gmk, guanylate kinase [Lactobacillus jensenii 208-1]
          Length = 185

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 22/165 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  GAGKTT  + L+   Q      H TR      + E+               
Sbjct: 3   KLIIIAGPSGAGKTTISNYLEEKYQIPRVLTHTTR---AIRSGESKDAYYFENEESFAKL 59

Query: 65  EA-EAIVFAAARLDHVENVIRPALMEGKIL--LCD-----RFLDSSYAYQGERDSSQHLF 116
              E++ + + +       +  A     I+  + D      +++   A Q      +   
Sbjct: 60  HLFESVKYGSYQYGSSREGLEKAWKTNDIVSLIVDTAGVKSYVEKLQANQFYFIYLKVSH 119

Query: 117 LDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           L++L+E +  +          D P +I LKR+ +R   R+    D
Sbjct: 120 LETLEERLVERG---------DEPTEI-LKRINSREFKRDLQLSD 154


>gi|189531921|ref|XP_697518.3| PREDICTED: signal recognition particle receptor subunit alpha
           isoform 2 [Danio rerio]
          Length = 650

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 24/141 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--------LSCG 58
           I+F G+ G GK+T+++ +  +L    + V +      T  A A   +         L   
Sbjct: 433 ITFCGVNGVGKSTNLAKISYWLIENGFTVLIAA--CDTFRAGAVEQLRTHQRRLNSLHPP 490

Query: 59  VDEFGAEAEAIV---FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQH 114
               G  A  +    +           I  A  +G  ++L D       A + + ++   
Sbjct: 491 EKHGGQPAVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLID------TAGRMQDNAPLM 544

Query: 115 LFLDSLQEISVQEVMPDCTII 135
             L  L  ++     PD  + 
Sbjct: 545 TALAKLIAVNT----PDLVLF 561


>gi|171683702|ref|XP_001906793.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941811|emb|CAP67464.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1247

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
             G FI+  G  G GK+T I LL+RF       V +  +P  +      R ++
Sbjct: 1023 KGQFIAVVGASGCGKSTIIGLLERFYDASTGTVRIASDPLPSINPRHYRAIV 1074


>gi|164687217|ref|ZP_02211245.1| hypothetical protein CLOBAR_00858 [Clostridium bartlettii DSM
           16795]
 gi|164603641|gb|EDQ97106.1| hypothetical protein CLOBAR_00858 [Clostridium bartlettii DSM
           16795]
          Length = 261

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 2/93 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHV-LLSCGVD 60
            G   +  G  G GK+T +  + R L+ K+ D+++ ++      + E AR++ +L     
Sbjct: 28  KGKITTIIGANGCGKSTILKTIARILKAKSGDIYINSKNINEQSSKEIARNMAVLPQSPQ 87

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
             G      + A  R  H          + +I+
Sbjct: 88  APGGLTVEELIAYGRFPHQSGFKNNKQEDKEIV 120


>gi|149737982|ref|XP_001498481.1| PREDICTED: similar to Putative adenylate kinase-like protein
           C9orf98 homolog [Equus caballus]
          Length = 479

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 66/230 (28%), Gaps = 58/230 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G   +GKTT    L + L      V                        +   A+ 
Sbjct: 60  IVILGPPASGKTTIAMWLCKHLNSNLLTV------------------------ENLIAKE 95

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL--LCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            + + AAAR  +  N   P++    ++  + DR  +     +G          +    I 
Sbjct: 96  FSSLAAAARKHYQINKRVPSMQ---LVRLIQDRVSEDDCVRRGWILDGIPETREQALMIQ 152

Query: 125 VQEVMPDCTIILDLPVDIGLKR-VQNRYSLR-------------ESACLDYF-------E 163
              + P   I+L  P  + ++R +  R   +             ES   D         E
Sbjct: 153 TVGITPRHVIVLSAPDTVLIERNLGKRIDPQTGEIYHTTFDWPSESEIQDRLIVPVGISE 212

Query: 164 RKD----VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +     +  H    +IF     + P    ++ +      V    L  V 
Sbjct: 213 LETAGKLLEYHRNIVRIF----PSYPKILKVISADQPCVDVFYQALTYVQ 258


>gi|116493686|ref|YP_805420.1| ABC-type multidrug transport system, ATPase component
           [Lactobacillus casei ATCC 334]
 gi|116103836|gb|ABJ68978.1| ABC-type multidrug transport system, ATPase component
           [Lactobacillus casei ATCC 334]
          Length = 311

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 15/133 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---VDEFGAE 65
           F G  GAGK+T I+++   L+     +     P  +  A   R  ++       ++  A 
Sbjct: 35  FLGPNGAGKSTTINIISTLLKADAGSIVYFNNPDLSNKAIKKRLGIVPQDIALYEDISAY 94

Query: 66  AEAIVFAA---ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                FAA    + D +   +  AL   K+ L DR  D    + G      ++      E
Sbjct: 95  ENVKFFAALYGVKRDVMREKVDSALE--KVGLLDRKDDKPETFSGGMKRRLNIACAIAHE 152

Query: 123 ISVQEVMPDCTII 135
                  PD  I 
Sbjct: 153 -------PDLIIF 158


>gi|326676235|ref|XP_003200533.1| PREDICTED: signal recognition particle receptor subunit alpha
           isoform 1 [Danio rerio]
          Length = 622

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 24/141 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--------LSCG 58
           I+F G+ G GK+T+++ +  +L    + V +      T  A A   +         L   
Sbjct: 405 ITFCGVNGVGKSTNLAKISYWLIENGFTVLIAA--CDTFRAGAVEQLRTHQRRLNSLHPP 462

Query: 59  VDEFGAEAEAIV---FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQH 114
               G  A  +    +           I  A  +G  ++L D       A + + ++   
Sbjct: 463 EKHGGQPAVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLID------TAGRMQDNAPLM 516

Query: 115 LFLDSLQEISVQEVMPDCTII 135
             L  L  ++     PD  + 
Sbjct: 517 TALAKLIAVNT----PDLVLF 533


>gi|315057013|ref|XP_003177881.1| calcium-translocating P-type ATPase [Arthroderma gypseum CBS
           118893]
 gi|311339727|gb|EFQ98929.1| calcium-translocating P-type ATPase [Arthroderma gypseum CBS
           118893]
          Length = 198

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 52/169 (30%), Gaps = 25/169 (14%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  G GK+T +  L   +  +  + V H TR P   P  E  R    +        
Sbjct: 11  VVISGPSGTGKSTLLKRLFAEYPDKFGFSVSHTTRGP--RPGEEDGREYNFTNK------ 62

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA +            I  A   G       +  S  A +   D  +   LD   E  
Sbjct: 63  --EAFLKLVDE----GGFIEHAQFGGNH-----YGTSIAAVKRVADQGRICVLDIEMEGV 111

Query: 125 VQEVMPDCT--IILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
            Q    D     +   P   +   KR++ R +  E +      +  V +
Sbjct: 112 KQVKRTDLNARFLFLAPPSIEELEKRLRGRGTESEDSLQKRLAQARVEL 160


>gi|304394559|ref|ZP_07376478.1| uridine kinase [Ahrensia sp. R2A130]
 gi|303293220|gb|EFL87601.1| uridine kinase [Ahrensia sp. R2A130]
          Length = 204

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEFGA 64
           ++  G  G+GKTT    +   L+ +   V +    G     A   AR ++   G  E   
Sbjct: 22  VAIAGPPGSGKTTVAEKVLSILKARGAAVSMVPMDGFHLDNAELEARGLMARKGAPETFD 81

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLC----DRFLDSSY--AYQGERD-----SSQ 113
                  AA  + H+E +      EG I +     DR  D++   A+  + D        
Sbjct: 82  -------AAGFVVHIERI-----AEGDIDVSLPGFDRTADATVPDAHLVKADDHIVLIEG 129

Query: 114 HLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNR 150
           +  L  +   +   ++P  D TI L  P  +  +R+  R
Sbjct: 130 NYLLLDIDPWAQ--LLPHFDMTIFLAPPTAVLEQRLIQR 166


>gi|293568358|ref|ZP_06679680.1| adenylate kinase [Enterococcus faecium E1071]
 gi|307287240|ref|ZP_07567308.1| putative adenylate kinase [Enterococcus faecalis TX0109]
 gi|291588928|gb|EFF20754.1| adenylate kinase [Enterococcus faecium E1071]
 gi|306501697|gb|EFM70989.1| putative adenylate kinase [Enterococcus faecalis TX0109]
          Length = 206

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 67/216 (31%), Gaps = 41/216 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G+ GAGK T    +         + H+T         E  R             +  
Sbjct: 4   VLLGLPGAGKGTQAKRIAE-------EYHLTA----ISTGEMLREATKEKDTFGLRVQE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQEISV 125
                  + + V +    +L + ++   D  +++ +   G   + Q   +    LQ  + 
Sbjct: 52  ----YMNKGELVPDEWINSLAKSRLQAKD--VENGFVLDGYPRTLQQAKMLEAYLQSQNQ 105

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---------------DYFERKDVMIH 170
                D    LD+  D    R+  R +LR                    D  E  +  +H
Sbjct: 106 NL---DAVFFLDVSQDTLRHRLAQRGNLRSKEKQGNSQIESKREKIRLDDKLEVIENRLH 162

Query: 171 EKRRQIFLDIARNQPDR--CHIVDSAHSFQSVATNI 204
              +++   +     +R   ++++    F +V  NI
Sbjct: 163 IN-KELMESLIHFYKERNLLYVINGEGDFDNVFDNI 197


>gi|284930277|gb|ADC30216.1| putative ABC-type sn-glycerol-3-phosphate transport system
          ATP-binding protein [Mycoplasma gallisepticum str.
          R(high)]
          Length = 577

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            G  ++F G  G GKTT ++ +   L
Sbjct: 55 KKGKLVTFLGPSGCGKTTTLNAIAGLL 81


>gi|229080870|ref|ZP_04213387.1| hypothetical protein bcere0023_35130 [Bacillus cereus Rock4-2]
 gi|228702448|gb|EEL54917.1| hypothetical protein bcere0023_35130 [Bacillus cereus Rock4-2]
          Length = 195

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 8   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 57  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L ++  +    D    LD+
Sbjct: 113 ELYKL--RACRSDVIFYLDV 130


>gi|298345443|ref|YP_003718130.1| adenylate kinase [Mobiluncus curtisii ATCC 43063]
 gi|315656225|ref|ZP_07909116.1| adenylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|298235504|gb|ADI66636.1| adenylate kinase [Mobiluncus curtisii ATCC 43063]
 gi|315493227|gb|EFU82827.1| adenylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 193

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 59/223 (26%), Gaps = 57/223 (25%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK TH   +                       +  R             + E
Sbjct: 6   VIMGPPGAGKGTHAKEIATHFH-----------IPWISTGDIFRK--------HKAEKTE 46

Query: 68  AIVFAAARLDHVENVIRPALMEGKIL---LCDR--------------FLDSSYAYQGERD 110
                         +I   + +G+ +   + DR              FL   Y     + 
Sbjct: 47  L-----------GKLIESYIDKGEFVPDSVTDRIVCERISQSDATAGFLLDGYPRSIPQA 95

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVM 168
                 L    E        D  I LD+      +R+  R  +  R     +  + +  +
Sbjct: 96  KVLKAVLAEANERV------DAAIYLDVSAAEVKQRLLKRAEIEGRTDDTPEVIDHRLEV 149

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             E   Q  LD    +      VD   +   +A  +L ++ E+
Sbjct: 150 FFEAT-QPLLDFYEQE-GVLRKVDGEGTIAEIAQRLLTVMEEI 190


>gi|254437588|ref|ZP_05051082.1| TOBE domain family [Octadecabacter antarcticus 307]
 gi|198253034|gb|EDY77348.1| TOBE domain family [Octadecabacter antarcticus 307]
          Length = 334

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          G F+ F G  G GK+T + L+    +    +V
Sbjct: 29 GEFVVFVGPSGCGKSTLLRLIAGLEEASGGNV 60


>gi|197284514|ref|YP_002150386.1| ABC transporter ATP-binding protein [Proteus mirabilis HI4320]
 gi|227356694|ref|ZP_03841080.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Proteus mirabilis ATCC 29906]
 gi|194682001|emb|CAR41466.1| ABC transporter, ATP-binding protein [Proteus mirabilis HI4320]
 gi|227163202|gb|EEI48133.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Proteus mirabilis ATCC 29906]
          Length = 589

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT I +L   L+
Sbjct: 42 GPDGAGKTTLIRMLAGLLK 60


>gi|167044477|gb|ABZ09152.1| putative SRP54-type protein, GTPase domain protein [uncultured
           marine crenarchaeote HF4000_APKG6J21]
          Length = 498

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 22/110 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARH---------VLL 55
            I F GI G GKTT I+ +   LQ+    V V         A E  R          +  
Sbjct: 107 LILFVGINGTGKTTTIAKIANLLQKNKISVVVAAADTFRAGAIEQLREHINKLNLKLIAQ 166

Query: 56  SCGVDEFGAEAEAIVFA------------AARLDHVENVIRPALMEGKIL 93
           + G D      +A+++A            A R+   +N++       K++
Sbjct: 167 NYGSDPAAVAHDALLYAKSHKVDCVLIDSAGRMQTNKNLMEQIAKISKVV 216


>gi|57642135|ref|YP_184613.1| hypothetical protein TK2200 [Thermococcus kodakarensis KOD1]
 gi|57160459|dbj|BAD86389.1| hypothetical protein, conserved [Thermococcus kodakarensis KOD1]
          Length = 448

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   Y V   R P   P  +  + V+      E   + E  +   
Sbjct: 134 GCGKSQTSRKVAQLLQEMGYKVVAIRHP--MPYGDLRKQVVQRFATFEDLDKYECTIEE- 190

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV---MP 130
                      P +  G ++       +   Y+     ++      L +    +     P
Sbjct: 191 ------REEYEPYIERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFYEP 238

Query: 131 DCTI 134
           D  I
Sbjct: 239 DLWI 242


>gi|22538103|ref|NP_688954.1| hypothetical protein SAG1967 [Streptococcus agalactiae 2603V/R]
 gi|25011992|ref|NP_736387.1| hypothetical protein gbs1954 [Streptococcus agalactiae NEM316]
 gi|76797943|ref|ZP_00780204.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
 gi|77412924|ref|ZP_00789128.1| conserved hypothetical protein [Streptococcus agalactiae 515]
 gi|22535009|gb|AAN00827.1|AE014280_19 hypothetical protein SAG1967 [Streptococcus agalactiae 2603V/R]
 gi|24413535|emb|CAD47613.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76586717|gb|EAO63214.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
 gi|77161064|gb|EAO72171.1| conserved hypothetical protein [Streptococcus agalactiae 515]
          Length = 195

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 50/225 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+ +G    GKTT + ++        Y          +P  +      L    ++   
Sbjct: 1   MIIAIQGGMAVGKTTALKII-----ENVYPKIAISFEDISPVVDKINKHQLD--NNKLDD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114
             E        + H  +     + + +I+L D          ++      Y     S+  
Sbjct: 54  YCEIQQLF---IQHERDRYE-LVRDNEIVLMDYGAEEIAFYTQYFPKVAGYSWTLPSNLL 109

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR- 173
           L ++ L+E        D  I LD    +  +R +N ++ +                +   
Sbjct: 110 LEVNRLKECFA-----DYIIFLDADETVLYQRQKNDFNRQRH------------FFKWYT 152

Query: 174 ------RQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
                 ++ +LD      +  H +++ H + + VA  I++I+ +L
Sbjct: 153 HHLLPAKKHYLD---TFSNVIH-INTNHLNAEEVAEKIIDIIRKL 193


>gi|290890927|ref|ZP_06553991.1| hypothetical protein AWRIB429_1381 [Oenococcus oeni AWRIB429]
 gi|290479326|gb|EFD87986.1| hypothetical protein AWRIB429_1381 [Oenococcus oeni AWRIB429]
          Length = 615

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
            G  I+  G  GAGKTT I+LL+RF
Sbjct: 399 KGQMIAIVGPTGAGKTTIINLLERF 423


>gi|302877705|ref|YP_003846269.1| signal recognition particle-docking protein FtsY [Gallionella
           capsiferriformans ES-2]
 gi|302580494|gb|ADL54505.1| signal recognition particle-docking protein FtsY [Gallionella
           capsiferriformans ES-2]
          Length = 321

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 31/146 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-------EFG 63
           G+ GAGKTT I  L ++LQ +   V +     G     AAR  L++ G         +  
Sbjct: 125 GVNGAGKTTSIGKLAKYLQSQGLSVMLA---AGDTFRAAAREQLMTWGERNNVTVIAQQS 181

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +A A+++ A +      +         ++L D            R ++Q   ++ ++++
Sbjct: 182 GDAAAVIYDAVQAAQARKI--------DVVLAD---------TAGRLTTQAHLMEEIKKV 224

Query: 124 --SVQEVMPDC--TIILDLPVDIGLK 145
              + +V+PD    ++L L  + G  
Sbjct: 225 KRVIAKVLPDAPHEVLLVLDANTGQN 250


>gi|302874527|ref|YP_003843160.1| ABC transporter transmembrane region [Clostridium cellulovorans
           743B]
 gi|307690861|ref|ZP_07633307.1| ABC transporter transmembrane region [Clostridium cellulovorans
           743B]
 gi|302577384|gb|ADL51396.1| ABC transporter transmembrane region [Clostridium cellulovorans
           743B]
          Length = 587

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
            +G  ++  G  GAGKTT I+LL RF +     + +     G    +  R  L
Sbjct: 369 KAGQMVAIVGPTGAGKTTLINLLMRFYEVNGGSIKI----DGVDIRDMKRETL 417


>gi|237713670|ref|ZP_04544151.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. D1]
 gi|262406232|ref|ZP_06082781.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Bacteroides sp. 2_1_22]
 gi|294647566|ref|ZP_06725142.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          ovatus SD CC 2a]
 gi|294810124|ref|ZP_06768795.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          xylanisolvens SD CC 1b]
 gi|229446392|gb|EEO52183.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. D1]
 gi|262354935|gb|EEZ04026.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Bacteroides sp. 2_1_22]
 gi|292637083|gb|EFF55525.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          ovatus SD CC 2a]
 gi|294442728|gb|EFG11524.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          xylanisolvens SD CC 1b]
          Length = 463

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|228999566|ref|ZP_04159144.1| ABC transporter-related protein [Bacillus mycoides Rock3-17]
 gi|229007124|ref|ZP_04164750.1| ABC transporter-related protein [Bacillus mycoides Rock1-4]
 gi|228754169|gb|EEM03588.1| ABC transporter-related protein [Bacillus mycoides Rock1-4]
 gi|228760277|gb|EEM09245.1| ABC transporter-related protein [Bacillus mycoides Rock3-17]
          Length = 254

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G FISF G  G GKTT +S++   L+     V V  EP
Sbjct: 33 GEFISFLGPSGCGKTTLLSIIAGLLKPIEGIVFVEDEP 70


>gi|225707436|gb|ACO09564.1| Adenylate kinase [Osmerus mordax]
          Length = 194

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 61/217 (28%), Gaps = 46/217 (21%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+   G  G+GK T               V          + +  R  + S        +
Sbjct: 12  FVV--GGPGSGKGTQCE-----------KVVAKYGYTHLSSGDLLRAEVSSGSERGMQLQ 58

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           A         LD V ++I+ A++    +    L D +                  +   +
Sbjct: 59  AIMQKGELVPLDTVLDMIKDAMIAKADVSKGFLIDGY---------------PREVKQGE 103

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEK----RR 174
           E   +   P   + +D   +  + R+  R     S   D  E   +K + ++ K      
Sbjct: 104 EFEKKIGAPCLLLYIDAKAETMVMRLMKRGET--SGRADDNEETIKKRLDLYYKATEPVI 161

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +             +DS      V  ++   +  L
Sbjct: 162 AFYESR-----GIVRKIDSELPVDEVFGHVAKAIDAL 193


>gi|226323164|ref|ZP_03798682.1| hypothetical protein COPCOM_00936 [Coprococcus comes ATCC 27758]
 gi|225208354|gb|EEG90708.1| hypothetical protein COPCOM_00936 [Coprococcus comes ATCC 27758]
          Length = 77

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 1  MNSGLF-----ISFEGIEGAGKTTHISLLKRFL 28
          M  G +     I+ +G  GAGK+T   L+ + L
Sbjct: 1  MKQGGYKMGYNIAIDGPAGAGKSTIAKLVAKEL 33


>gi|241206619|ref|YP_002977715.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860509|gb|ACS58176.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM1325]
          Length = 270

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG F+S  G  G+GK+T + LL + L+
Sbjct: 30 SGEFVSIVGPSGSGKSTVLRLLTQALR 56


>gi|281357053|ref|ZP_06243543.1| signal recognition particle-docking protein FtsY [Victivallis
           vadensis ATCC BAA-548]
 gi|281316611|gb|EFB00635.1| signal recognition particle-docking protein FtsY [Victivallis
           vadensis ATCC BAA-548]
          Length = 309

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ G+GKTT I  L   L+ +N  V +
Sbjct: 111 GVNGSGKTTTIGKLAARLKAENKKVIL 137


>gi|119493132|ref|ZP_01624038.1| guanylate kinase [Lyngbya sp. PCC 8106]
 gi|119452786|gb|EAW33962.1| guanylate kinase [Lyngbya sp. PCC 8106]
          Length = 186

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 1/69 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
          + G  I   G  G GK T +  L +  +     V   TR P          + +     +
Sbjct: 3  SQGKLIVITGPSGVGKGTLVRQLLQRHRELRLSVSITTRSPRPGEVEGKDYYFVDHQRFE 62

Query: 61 EFGAEAEAI 69
          +     E +
Sbjct: 63 QMVENGELL 71


>gi|325569692|ref|ZP_08145739.1| adenylylsulfate kinase [Enterococcus casseliflavus ATCC 12755]
 gi|325157248|gb|EGC69413.1| adenylylsulfate kinase [Enterococcus casseliflavus ATCC 12755]
          Length = 209

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 48/159 (30%), Gaps = 33/159 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGV 59
           M  G  +   G+  +GKTT +  L R        +          P+A +  + L     
Sbjct: 45  MKRGKVVVVSGVTASGKTTLVRELSRL--ADGIVISFDDYSIDALPSAPSFDYFLQDPRA 102

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                +   ++    R   ++ +I              F+D  + Y       +H  L  
Sbjct: 103 AINQYDISLLLKDLKRAMSIQPII--------------FVDFPFGY-------EHQDLRQ 141

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           L          D  I L  P+DI   R   R    ES  
Sbjct: 142 LI---------DTVIYLKTPLDIAFARQIKRDYTNESKE 171


>gi|325954331|ref|YP_004237991.1| Iron-chelate-transporting ATPase [Weeksella virosa DSM 16922]
 gi|323436949|gb|ADX67413.1| Iron-chelate-transporting ATPase [Weeksella virosa DSM 16922]
          Length = 257

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKR 26
           G FI+  G  GAGK++ ++ L  
Sbjct: 26 KGKFIAIIGPNGAGKSSLLNYLAN 49


>gi|307322838|ref|ZP_07602143.1| spermidine/putrescine ABC transporter ATPase subunit
          [Sinorhizobium meliloti AK83]
 gi|306891515|gb|EFN22396.1| spermidine/putrescine ABC transporter ATPase subunit
          [Sinorhizobium meliloti AK83]
          Length = 356

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++F G  G+GKTT + ++ 
Sbjct: 27 IKPGEFVTFLGPSGSGKTTALKMIA 51


>gi|301058923|ref|ZP_07199892.1| ABC transporter, ATP-binding protein [delta proteobacterium
          NaphS2]
 gi|300446919|gb|EFK10715.1| ABC transporter, ATP-binding protein [delta proteobacterium
          NaphS2]
          Length = 595

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          + G   +  G +GAGKTT I ++   L
Sbjct: 39 HPGKLTALVGPDGAGKTTVIRMVAGLL 65


>gi|298483865|ref|ZP_07002036.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. D22]
 gi|295083806|emb|CBK65329.1| spermidine/putrescine ABC transporter ATP-binding subunit
          [Bacteroides xylanisolvens XB1A]
 gi|298269925|gb|EFI11515.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. D22]
          Length = 463

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTILGPSGCGKTTLLRLIA 56


>gi|315505270|ref|YP_004084157.1| daunorubicin resistance abc transporter atpase subunit
           [Micromonospora sp. L5]
 gi|315411889|gb|ADU10006.1| daunorubicin resistance ABC transporter ATPase subunit
           [Micromonospora sp. L5]
          Length = 327

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 61/201 (30%), Gaps = 18/201 (8%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI- 69
           G  GAGK+T + LL   L        V      T AAE  R + LS              
Sbjct: 37  GPNGAGKSTAVRLLTTLLAPTGGRAEVAGFDVVTQAAEVRRVISLSGQHAAVDENLSGFE 96

Query: 70  -VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
            +    RL H+ +       +    L  RF     A  G R       +    +++   +
Sbjct: 97  NLEMLGRLLHLGSRQSRQRADE---LLQRFDLVDAA--GRRAKEYSGGMRRRLDLAAALI 151

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
                + LD     GL     R        +       + +    +  +L+ A    D+ 
Sbjct: 152 RTPRVLFLD-EPTTGLD---TRSRTALWDTIGELVSGGMTLLLTTQ--YLEEADRLADQI 205

Query: 189 HIVD-----SAHSFQSVATNI 204
            ++D     +  +   +   +
Sbjct: 206 VVIDHGRVVAGGTPDELKRRV 226


>gi|284053711|ref|ZP_06383921.1| excinuclease ABC subunit A [Arthrospira platensis str. Paraca]
 gi|291568167|dbj|BAI90439.1| excinuclease ABC subunit A [Arthrospira platensis NIES-39]
          Length = 967

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNY-DVHVTREPGGTPAAEAARHVL 54
           G F+   G+ G+GK+T I+ LL   LQ   Y  +   ++       +A   V+
Sbjct: 658 GKFVCITGVSGSGKSTLINDLLYPALQHHFYGKIAFPKQLDKIRGLDALDKVI 710


>gi|269121543|ref|YP_003309720.1| guanylate kinase [Sebaldella termitidis ATCC 33386]
 gi|268615421|gb|ACZ09789.1| guanylate kinase [Sebaldella termitidis ATCC 33386]
          Length = 181

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL 28
           G  I   G  GAGK+T   + +  L
Sbjct: 2  KGKLIVVSGPSGAGKSTVTKIARDKL 27


>gi|206890853|ref|YP_002248251.1| guanylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742791|gb|ACI21848.1| guanylate kinase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 204

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 24/143 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             G+        G GKTT    L + L      + H TR+P            +     +
Sbjct: 5   KKGIIFVISAPSGTGKTTLCERLLKILPDLKMSISHTTRQPRPYEKNGVDYFFVDKKNFE 64

Query: 61  EFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +     E I +A          + VI   +  G  +L D  +D+    QG +        
Sbjct: 65  KMIVNDEFIEWAEVYGNFYGTSKKVIFDLIKNGYDILLD--IDT----QGAK-------- 110

Query: 118 DSLQEISVQEVMPDCTIILDLPV 140
                 +++++ PD  +I  LP 
Sbjct: 111 ------NIRKLYPDSVLIFILPP 127


>gi|226506788|ref|NP_001144141.1| hypothetical protein LOC100276991 [Zea mays]
 gi|194689568|gb|ACF78868.1| unknown [Zea mays]
 gi|195637454|gb|ACG38195.1| hypothetical protein [Zea mays]
 gi|219888187|gb|ACL54468.1| unknown [Zea mays]
          Length = 270

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 38/150 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G+ G+GK+T    L R L  + +              +  R         +
Sbjct: 91  QKGCVVWITGLSGSGKSTLACALSRELHCRGH-------LTYVLDGDNLR----HGLNRD 139

Query: 62  FGAEAEAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119
              +AE       R +++  V   A L     ++C   + S  + Y+ +RD         
Sbjct: 140 LSFKAE------DRAENIRRVGEVAKLFADAGVIC---IASLISPYRRDRD--------- 181

Query: 120 LQEISVQEVMPD---CTIILDLPVDIGLKR 146
               + + ++P      + +DLP+ I   R
Sbjct: 182 ----ACRALLPHSNFIEVFIDLPLKICEAR 207


>gi|156973090|ref|YP_001443997.1| adenylylsulfate kinase [Vibrio harveyi ATCC BAA-1116]
 gi|156524684|gb|ABU69770.1| hypothetical protein VIBHAR_00769 [Vibrio harveyi ATCC BAA-1116]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|156847759|ref|XP_001646763.1| hypothetical protein Kpol_1023p74 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117443|gb|EDO18905.1| hypothetical protein Kpol_1023p74 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 187

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 14/100 (14%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  G GK+T +  L   +     + V   TR P          + +          
Sbjct: 5   IVISGPSGTGKSTLLKKLFAEYPTSFGFSVSSTTRGPRPGEVNGKDYNFVKVDDFQGMID 64

Query: 65  EAEAIV--------FAAARLDHVENVIRPALMEGKILLCD 96
             +  +        +    ++ V  VI      GK  + D
Sbjct: 65  SGDKFIEWAQFSGNYYGTTVESVHKVI----DSGKTCILD 100


>gi|153834372|ref|ZP_01987039.1| adenylylsulfate kinase [Vibrio harveyi HY01]
 gi|148869220|gb|EDL68242.1| adenylylsulfate kinase [Vibrio harveyi HY01]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|118138545|pdb|2IXF|A Chain A, Crystal Structure Of The Atpase Domain Of Tap1 With Atp
          (D645q, Q678h Mutant)
 gi|118138546|pdb|2IXF|B Chain B, Crystal Structure Of The Atpase Domain Of Tap1 With Atp
          (D645q, Q678h Mutant)
 gi|118138547|pdb|2IXF|C Chain C, Crystal Structure Of The Atpase Domain Of Tap1 With Atp
          (D645q, Q678h Mutant)
 gi|118138548|pdb|2IXF|D Chain D, Crystal Structure Of The Atpase Domain Of Tap1 With Atp
          (D645q, Q678h Mutant)
          Length = 271

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 52 GPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 82


>gi|118138549|pdb|2IXG|A Chain A, Crystal Structure Of The Atpase Domain Of Tap1 With Atp
          (S621a, G622v, D645n Mutant)
          Length = 271

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 52 GPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 82


>gi|118138543|pdb|2IXE|A Chain A, Crystal Structure Of The Atpase Domain Of Tap1 With Atp
          (D645n Mutant)
 gi|118138544|pdb|2IXE|D Chain D, Crystal Structure Of The Atpase Domain Of Tap1 With Atp
          (D645n Mutant)
          Length = 271

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 52 GPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 82


>gi|115522361|ref|YP_779272.1| sulfate adenylyltransferase, large subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115516308|gb|ABJ04292.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Rhodopseudomonas palustris BisA53]
          Length = 631

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 14/84 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +L+++ L    +  ++          +  R         + G   EA V
Sbjct: 466 GLSGAGKSTIANLVEKRLSDLGHHTYLL-------DGDNLR----HGINRDLGFSTEARV 514

Query: 71  FAAARLDHVENVIRPALMEGKILL 94
               R   V  + R  +  G I+L
Sbjct: 515 ENIRR---VGEIARLFVDAGLIVL 535


>gi|56717|emb|CAA40742.1| mtp1 [Rattus norvegicus]
          Length = 740

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 530 GPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 560


>gi|1771574|emb|CAA71284.1| Tap1 protein [Rattus norvegicus]
 gi|74355728|gb|AAI01855.1| Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Rattus
           norvegicus]
          Length = 725

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 515 GPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 545


>gi|1771570|emb|CAA71282.1| Tap1 protein [Rattus norvegicus]
          Length = 725

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 515 GPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 545


>gi|16125172|ref|NP_419736.1| hypothetical protein CC_0920 [Caulobacter crescentus CB15]
 gi|221233905|ref|YP_002516341.1| gluconate kinase [Caulobacter crescentus NA1000]
 gi|13422188|gb|AAK22904.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220963077|gb|ACL94433.1| gluconate kinase [Caulobacter crescentus NA1000]
          Length = 499

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 23/157 (14%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEAEA 68
           G+ G+GK+T   +    L       V  T E          R  L     +     EA  
Sbjct: 333 GLSGSGKSTFSRVCAPGLGSAPGAVVLRTDE---------IRKRLWGVPSLQRLPREAYT 383

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
              +A   D +       L  G+ ++ D        +    + ++   L    +++    
Sbjct: 384 PEMSARVYDQLFQDAELCLKAGRSVVLD------AVFLKPEERARAEVLAKTCDVAFLG- 436

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                + L+ P ++   RV  R      A +   E +
Sbjct: 437 -----VWLEAPPEVLRARVAARVDDASDADVAVLENQ 468


>gi|2506117|sp|P36370|TAP1_RAT RecName: Full=Antigen peptide transporter 1; Short=APT1; AltName:
           Full=ATP-binding cassette sub-family B member 2;
           AltName: Full=Peptide transporter TAP1
 gi|1771566|emb|CAA71280.1| Tap1 protein [Rattus norvegicus]
 gi|227426|prf||1703417A mtp1 protein
          Length = 725

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 515 GPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 545


>gi|330466283|ref|YP_004404026.1| signal recognition particle protein [Verrucosispora maris
           AB-18-032]
 gi|328809254|gb|AEB43426.1| signal recognition particle protein [Verrucosispora maris
           AB-18-032]
          Length = 515

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++G+GKTT    L R+L+ + +
Sbjct: 107 GLQGSGKTTLAGKLARWLKAQGH 129


>gi|325958306|ref|YP_004289772.1| signal recognition particle-docking protein FtsY [Methanobacterium
           sp. AL-21]
 gi|325329738|gb|ADZ08800.1| signal recognition particle-docking protein FtsY [Methanobacterium
           sp. AL-21]
          Length = 427

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 18/132 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+   GI G GKTT I+ +  +   K Y   +      T  A A     L+   D    
Sbjct: 235 MFV---GINGTGKTTTIAKISTYFINKGYTPVIAA--SDTFRAGAIEQ--LTHHADNLDV 287

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +       A       + +  A  +GK ++L D            R  +    +D +++I
Sbjct: 288 KIIKHKKGADPAAVAFDAVAHARAKGKELVLVD---------TAGRMQTNINLMDEMKKI 338

Query: 124 SVQEVMPDCTII 135
             + + PD  I 
Sbjct: 339 -KRVIKPDLIIY 349


>gi|319779620|ref|YP_004130533.1| Methionine ABC transporter ATP-binding protein [Taylorella
          equigenitalis MCE9]
 gi|317109644|gb|ADU92390.1| Methionine ABC transporter ATP-binding protein [Taylorella
          equigenitalis MCE9]
          Length = 261

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51
           G FIS  G  G+GK+T ++L+   L+  +  + ++     +  +E++R
Sbjct: 34 KGEFISIIGSNGSGKSTLLNLISGTLKPDSGKIILSDRGDTSKLSESSR 82


>gi|313202298|ref|YP_004040956.1| sulfonate/nitrate/taurine transport system ATP-binding protein
          [Methylovorus sp. MP688]
 gi|312441614|gb|ADQ85720.1| sulfonate/nitrate/taurine transport system ATP-binding protein
          [Methylovorus sp. MP688]
          Length = 276

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
            G FI   G  G GKTT ++LL
Sbjct: 46 KPGEFIVLLGPSGCGKTTLLNLL 68


>gi|290958950|ref|YP_003490132.1| ABC transporter ATP-binding protein [Streptomyces scabiei 87.22]
 gi|260648476|emb|CBG71587.1| putative ABC-transporter ATP-binding subunit [Streptomyces scabiei
           87.22]
          Length = 343

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 62/200 (31%), Gaps = 45/200 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE---AE 67
           G  GAGKTT + +L   L+    + HV        A E    V L+        +    E
Sbjct: 42  GPNGAGKTTTVKMLATLLRPDGGEAHVFGHDVVREADEVRGRVSLTGQYASVDEDLTGTE 101

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA------YQGERDSSQHLFLDSLQ 121
            +V  A  L H +   R  L  G+  L + F  S  A      Y G       +    L 
Sbjct: 102 NLVLLARLLGHGKAAAR--LRAGQ--LLEAFGLSEAAAKQVKHYSGGMRRRIDIAASILN 157

Query: 122 EISVQEVMPDCTIILDLPVDIGLK-RVQNRYSLRESACLDYFERKDVMIHEKRRQI---- 176
                   PD  + LD     GL  R +N+      A                 Q     
Sbjct: 158 -------TPDL-LFLD-EPTTGLDPRSRNQVWDIVRAV--------------VAQGTTVL 194

Query: 177 ----FLDIARNQPDRCHIVD 192
               +LD A     R  ++D
Sbjct: 195 LTTQYLDEADQLASRIAVID 214


>gi|260587857|ref|ZP_05853770.1| guanylate kinase [Blautia hansenii DSM 20583]
 gi|331083859|ref|ZP_08332968.1| guanylate kinase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260542122|gb|EEX22691.1| guanylate kinase [Blautia hansenii DSM 20583]
 gi|330403284|gb|EGG82844.1| guanylate kinase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 210

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 26/167 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G+ +   G  GAGK T +  L          V   TR+P   P  E  R          
Sbjct: 4   RGILVVVSGFSGAGKGTLMKRLMEKYDNYALSVSATTRDP--RPGEEHGREYFFHTK--- 58

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLD 118
              E E ++   A +++ + V             D +  +  AY   Q        L ++
Sbjct: 59  --KEFEELILEDALIEYAQYV-------------DNYYGTPKAYVEKQLNMGKDVILEIE 103

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
               + V++ MP+ T++L +      + +++R   R +  +D  E +
Sbjct: 104 IQGALKVKKKMPN-TLLLFVTPPNAEE-LKHRLVNRGTESMDVIESR 148


>gi|206895512|ref|YP_002247493.1| guanylate kinase (GMP kinase) [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738129|gb|ACI17207.1| guanylate kinase (GMP kinase) [Coprothermobacter proteolyticus DSM
           5265]
          Length = 221

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 28/163 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G  I   G  G GK T +S L    +     +   TR P          + +      +
Sbjct: 2   GGRLIVISGPSGVGKGTVVSELLNRDKELVLSISVTTRSPRPGEVDGKDYYFVDYSTFKK 61

Query: 62  FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             A  + ++  A          ++ +   L +G+ ++ +  +D   A Q  R        
Sbjct: 62  MVA-TDRLLEWAYVHGSYYGTPKDFVMQHLEQGRKVILE--IDMQGAMQVRRR------- 111

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                       PD  +I  LP    L  +++R   R +  +D
Sbjct: 112 -----------FPDAILIFLLPP--SLDELKHRLMKRGTEEMD 141


>gi|194014922|ref|ZP_03053539.1| adenylylsulfate kinase [Bacillus pumilus ATCC 7061]
 gi|194013948|gb|EDW23513.1| adenylylsulfate kinase [Bacillus pumilus ATCC 7061]
          Length = 197

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                  +L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQVT-----------------VLDGDNVRHGLNKDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
               R +++     V +  + +G I++ 
Sbjct: 76  SDDDRKENIRRIGEVAKLFVEQGTIVIT 103


>gi|126436508|ref|YP_001072199.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium sp. JLS]
 gi|126236308|gb|ABN99708.1| adenylylsulfate kinase / sulfate adenylyltransferase subunit 1
           [Mycobacterium sp. JLS]
          Length = 619

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 17/82 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G  + F G+ G+GK++    +++ L  +    +                 +L     
Sbjct: 445 LSRGRTVWFTGLSGSGKSSVAVRVEQKLLERGCPAY-----------------VLDGDNL 487

Query: 61  EFGAEAEAIVFAAARLDHVENV 82
             G  A+     A R +++  +
Sbjct: 488 RHGLNADLGFSMADRAENLRRL 509


>gi|92115132|ref|YP_575060.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Chromohalobacter salexigens DSM 3043]
 gi|91798222|gb|ABE60361.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Chromohalobacter salexigens DSM 3043]
          Length = 474

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 54/155 (34%), Gaps = 25/155 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G++GAGKTT ++ L RFL+ +    V V       PAA     +      +    E E  
Sbjct: 106 GLQGAGKTTSVAKLARFLREREKKKVLVVSADVYRPAA--IDQL------ETLANEVEVD 157

Query: 70  VFAAARLDHVENVIRPALME-----GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            F +        + + A+         I++ D            R S     ++ +Q + 
Sbjct: 158 FFPSTSAQRPVEIAQAAIKHAKIQFHDIVIVD---------TAGRLSVDQAMMEEIQAL- 207

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
                PD T+ + +    G        +  E+  L
Sbjct: 208 HGATTPDETLFV-VDAMTGQDAANTAQAFHEALPL 241


>gi|147902601|ref|NP_001086807.1| MGC82526 protein [Xenopus laevis]
 gi|50604088|gb|AAH77482.1| MGC82526 protein [Xenopus laevis]
          Length = 198

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 72/213 (33%), Gaps = 33/213 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP-GGTPAAEAARHVLLS--CGVDE 61
           +   G  GAGK+T + +L R  +    + V H TR+P  G    +    V L       E
Sbjct: 7   VVLTGPSGAGKSTLLKMLMREYEGLFGFSVSHTTRKPRPGEVHGKDYHFVTLEDMKKGVE 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G   E  VF+          ++      +I + D         QG +   +      L 
Sbjct: 67  RGDFIEHAVFSGNMYGTSTAAVQAVQANNQICILD------IDMQGVKSIKKT----RLN 116

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I +    P         V I  KR+++R +  E +                    L+I+
Sbjct: 117 PIYISIHPP--------SVQILEKRLRDRNTESEESLQKRLNAAIAD---------LEIS 159

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
           + +P     +      +   T +  I+ E +++
Sbjct: 160 K-EPGLFDAIIVNDDLEEAYTKLKGILGEEIKQ 191


>gi|14521472|ref|NP_126948.1| putative NTPase [Pyrococcus abyssi GE5]
 gi|54036616|sp|Q9UZ81|NTPTH_PYRAB RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase
          THEP1; AltName: Full=Nucleoside triphosphate
          phosphohydrolase
 gi|5458691|emb|CAB50178.1| Hypothetical ATP-binding protein, containing DUF265 domain
          [Pyrococcus abyssi GE5]
          Length = 179

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGV 59
          G+ G GKTT    +   ++R+ Y V   +T+E    P     R + L  G 
Sbjct: 7  GMPGVGKTTLAKRIADEIRREGYKVGGIITQEIRTGPKRSGFRVIALDTGE 57


>gi|14590952|ref|NP_143027.1| ATPase [Pyrococcus horikoshii OT3]
 gi|3257539|dbj|BAA30222.1| 605aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 605

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF 62
           G+ ++  G  GAGKTT +  L  +       V    +P      E       L   +++ 
Sbjct: 263 GILVA--GPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVREEITQYTALDGSMEKT 320

Query: 63  GA 64
           G 
Sbjct: 321 GD 322


>gi|325506788|gb|ADZ18426.1| adenylate kinase [Chlamydophila psittaci 6BC]
          Length = 204

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 45/148 (30%), Gaps = 36/148 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  G+GK T    L   L+               +  P G  AAE      L      +G
Sbjct: 2   GPPGSGKGTQSQRLAHLLKLPHISSGELFRSAIESASPLGIKAAEYINQGCLVPDEIVWG 61

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              EA+              +P    G I+             G   +     L  L + 
Sbjct: 62  MVQEALN-------------QPECRSGCII------------DGFPRTLDQAIL--LNDF 94

Query: 124 SVQEVMPD-CTIILDLPVDIGLKRVQNR 150
            VQ    D   I LD+  +  ++R+ +R
Sbjct: 95  FVQSHA-DYRVIQLDVSNEEIIRRIHSR 121


>gi|325125696|gb|ADY85026.1| ABC transporter, ATP-binding/permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 332

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
            G  ++  G  GAGKTT I+LL+RF   K   +++  +   + + E  R 
Sbjct: 208 KGEMVAIVGPTGAGKTTIINLLERFYDVKGGQIYLDGQETRSMSREDLRS 257


>gi|310642234|ref|YP_003946992.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Paenibacillus polymyxa SC2]
 gi|309247184|gb|ADO56751.1| Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Paenibacillus polymyxa SC2]
          Length = 200

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  S L++ L  +                   R  +L       G     
Sbjct: 32  FTGLSGSGKSTVSSTLEKALYARG-----------------IRTFILDGDNVRHGLNRNL 74

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +     G + +C
Sbjct: 75  GFLPADRKENIRRIAEVSKLMAHAGVLTIC 104


>gi|308061671|gb|ADO03559.1| guanylate kinase [Helicobacter pylori Cuz20]
          Length = 206

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 7/97 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           L I   G  GAGK+T    L+  + + ++ +   TR+P      +   +  +S    + G
Sbjct: 7   LLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSEEEFKQG 64

Query: 64  AEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96
            E    +  A   +H        +  AL EGKI++ D
Sbjct: 65  IEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101


>gi|303238325|ref|ZP_07324860.1| metal dependent phosphohydrolase [Acetivibrio cellulolyticus CD2]
 gi|302594029|gb|EFL63742.1| metal dependent phosphohydrolase [Acetivibrio cellulolyticus CD2]
          Length = 297

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 25/115 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN   FI   G+ G+GK+T    L              +E     +++  R  L     +
Sbjct: 1   MNK--FIMMVGLPGSGKSTLAKELA------------LKENAALHSSDDLREELFGDANN 46

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           +   E   +VF       +   I   L EGK ++   +  ++ +Y+  + +   +
Sbjct: 47  QDNNE---LVF-----QELNRRINQDLSEGKSVV---YDATNLSYKKRKLTLDRI 90


>gi|302391803|ref|YP_003827623.1| cytidylate kinase [Acetohalobium arabaticum DSM 5501]
 gi|302203880|gb|ADL12558.1| cytidylate kinase [Acetohalobium arabaticum DSM 5501]
          Length = 223

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 14/96 (14%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M S + I+ +G  GAGK+T    +   L         T            R + L    +
Sbjct: 1  MQSDIVITIDGPAGAGKSTVAKRVAEQL---GIIYIDT--------GAMYRALTLKALRE 49

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
          +     E  +   A L H   +    +     +L D
Sbjct: 50 DIDLNNEDEL---AHLAHRTEIELEKIDGEDKVLLD 82


>gi|290559218|gb|EFD92569.1| signal recognition particle receptor [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 386

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 15/127 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I+ L +    K     +    G T  A +   + +     +         
Sbjct: 189 GVNGAGKTTTIAKLCKLFLSKGLKPVIAA--GDTFRAASIEQLEIHAKKLKVP--IIKHT 244

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
           + +       + I+ A      +++ D            R       ++ L++   +   
Sbjct: 245 YGSDPAAVAFDAIKHANSAKEDVVVID---------TAGRSDINKNLIEELKK-VKRVSK 294

Query: 130 PDCTIIL 136
           PD TI +
Sbjct: 295 PDMTIFI 301


>gi|228993531|ref|ZP_04153440.1| ABC transporter-related protein [Bacillus pseudomycoides DSM
          12442]
 gi|228766246|gb|EEM14891.1| ABC transporter-related protein [Bacillus pseudomycoides DSM
          12442]
          Length = 254

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G FISF G  G GKTT +S++   L+     V V  EP
Sbjct: 33 GEFISFLGPSGCGKTTLLSIIAGLLKPIEGIVFVEDEP 70


>gi|229111078|ref|ZP_04240637.1| hypothetical protein bcere0018_33250 [Bacillus cereus Rock1-15]
 gi|228672441|gb|EEL27726.1| hypothetical protein bcere0018_33250 [Bacillus cereus Rock1-15]
          Length = 195

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 25/140 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 8   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 57  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L ++  +E   D    LD+
Sbjct: 113 ELYKL--RECRSDVIFYLDV 130


>gi|227890556|ref|ZP_04008361.1| dephospho-CoA kinase [Lactobacillus salivarius ATCC 11741]
 gi|227867494|gb|EEJ74915.1| dephospho-CoA kinase [Lactobacillus salivarius ATCC 11741]
          Length = 201

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 38/214 (17%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVH-------VTREPGGTPAAEA----ARHVLLS 56
           G+ G   +GKTT       +L+   Y +           EP      E        +L S
Sbjct: 5   GLTGGIASGKTTVS----TYLKEMGYPIIDADKVSRKVVEPHTEGLKEISHFFGNDILQS 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G        E +     + + +  ++   +      + D+       Y+ +      L 
Sbjct: 61  DGSLNRKKLGEVVFENKDKRELLNKILSKKIRTE---IIDQIEY----YKKQGADVLILD 113

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
           +  L E    ++  D T+++ +P ++ ++R+  R  L     L     +           
Sbjct: 114 IPLLFEGGYDKMC-DFTMVIYIPKELQIERLIQRDGLTRDKALKRISAQ----------- 161

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210
            LD A        ++D++ S +     ++  +  
Sbjct: 162 -LDSAERNSKADIVIDNSRSIEDTHNQVIEWLER 194


>gi|268590163|ref|ZP_06124384.1| RTX toxin transporter [Providencia rettgeri DSM 1131]
 gi|291314442|gb|EFE54895.1| RTX toxin transporter [Providencia rettgeri DSM 1131]
          Length = 699

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           NSG FI   G  G+GK+T   LL+R    ++  V V
Sbjct: 486 NSGEFIGITGPSGSGKSTLTKLLQRLYVPQHGQVIV 521


>gi|255658375|ref|ZP_05403784.1| guanylate kinase [Mitsuokella multacida DSM 20544]
 gi|260849706|gb|EEX69713.1| guanylate kinase [Mitsuokella multacida DSM 20544]
          Length = 199

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 22/166 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL I   G  G GK T  + L        Y +   TR+P          + L     
Sbjct: 1   MSKGLLIVISGPSGTGKGTVCAELLSQTPELAYSISATTRQPRDGEVDGKNYYFLTKEAF 60

Query: 60  DEFGAEAEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           ++   E   + +A    ++       I      G+ +L +  +D+  A    +     LF
Sbjct: 61  EKMIGEGGFLEYANVYGNYYGTPLGKIEERREAGQDILLE--IDTQGALNVMKRCPDGLF 118

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
           +          + P          ++  +R++ R +  E +     
Sbjct: 119 I--------FLLPPSL-------PEL-ERRIRGRGTETEESLARRL 148


>gi|218512486|ref|ZP_03509326.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli 8C-3]
          Length = 59

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|210615485|ref|ZP_03290612.1| hypothetical protein CLONEX_02828 [Clostridium nexile DSM 1787]
 gi|210150334|gb|EEA81343.1| hypothetical protein CLONEX_02828 [Clostridium nexile DSM 1787]
          Length = 451

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 12/88 (13%)

Query: 11  GIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE-A 68
           G + G GK+T +  + + L    + V            E+ + + L    +  G   E  
Sbjct: 93  GGDPGIGKSTLLLQVCQRLCEDKHQVLYIS------GEESLKQIKL--RANRMGEFTEDL 144

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCD 96
           ++     L+ V+NVI+    + ++++ D
Sbjct: 145 LLLCETNLEIVKNVIQK--RKPEVVIID 170


>gi|182412652|ref|YP_001817718.1| carbohydrate kinase [Opitutus terrae PB90-1]
 gi|177839866|gb|ACB74118.1| carbohydrate kinase, thermoresistant glucokinase family [Opitutus
           terrae PB90-1]
          Length = 156

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 63/205 (30%), Gaps = 57/205 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT   LL R L              G   A+A          ++    A   +
Sbjct: 2   GVSGSGKTTVGKLLAREL--------------GWSFADADD---FHSAANKAKMAAGHPL 44

Query: 71  FAAARL---DHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSLQEISV 125
             A R      +   I   L  GK ++      S+   +Y+ +   +     D+++ + +
Sbjct: 45  NDADRAPWLTALRQHIEECLASGKNVVI---ACSALKASYRAQLRGNS----DAIKWVHL 97

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ- 184
                          ++   R+ +R      A +   + +              +A  + 
Sbjct: 98  HG-----------SPELIRSRLASRSGHYMRAQM--LDSQ--------------LATLEP 130

Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209
           P     VD A +   +   I   + 
Sbjct: 131 PKHALTVDVAATPAEIVDQIRRALH 155


>gi|157692240|ref|YP_001486702.1| adenylyl-sulfate kinase [Bacillus pumilus SAFR-032]
 gi|167011320|sp|A8FD25|CYSC_BACP2 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|157680998|gb|ABV62142.1| adenylyl-sulfate kinase [Bacillus pumilus SAFR-032]
          Length = 197

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +   R L  + Y V                  +L       G   +   
Sbjct: 33  GLSGSGKSTIANAAARELFEQGYQVT-----------------VLDGDNVRHGLNKDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILLC 95
               R +++     V +  + +G I++ 
Sbjct: 76  SDDDRKENIRRIGEVAKLFVEQGTIVIT 103


>gi|160883286|ref|ZP_02064289.1| hypothetical protein BACOVA_01255 [Bacteroides ovatus ATCC 8483]
 gi|237722336|ref|ZP_04552817.1| uridine kinase [Bacteroides sp. 2_2_4]
 gi|260171045|ref|ZP_05757457.1| uridine kinase [Bacteroides sp. D2]
 gi|293372009|ref|ZP_06618408.1| uridine kinase [Bacteroides ovatus SD CMC 3f]
 gi|315919365|ref|ZP_07915605.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156111270|gb|EDO13015.1| hypothetical protein BACOVA_01255 [Bacteroides ovatus ATCC 8483]
 gi|229448146|gb|EEO53937.1| uridine kinase [Bacteroides sp. 2_2_4]
 gi|292633020|gb|EFF51602.1| uridine kinase [Bacteroides ovatus SD CMC 3f]
 gi|313693240|gb|EFS30075.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 217

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 16  LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 74

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
              +++       HV       L EGK +    +   +   Q E    +   +  ++ I 
Sbjct: 75  FEWSLL-----SKHVMT-----LKEGKSIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 124

Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 ++ +M D  I +D   D  L RV  R  +      +
Sbjct: 125 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVIERGRTAE 165


>gi|159041775|ref|YP_001541027.1| ABC transporter related [Caldivirga maquilingensis IC-167]
 gi|157920610|gb|ABW02037.1| ABC transporter related [Caldivirga maquilingensis IC-167]
          Length = 305

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          N G  ++  G  GAGKTT + +L   L+
Sbjct: 26 NRGKVVTLLGPNGAGKTTLVRILTTELE 53


>gi|118431553|ref|NP_148094.2| transport system kinase [Aeropyrum pernix K1]
 gi|116062878|dbj|BAA80684.2| transport system kinase [Aeropyrum pernix K1]
          Length = 322

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAAR 51
           I F GI GAGK+T +S +   L+R+ Y V V          GG+   +  R
Sbjct: 50  IGFTGIPGAGKSTLVSRVITGLRRRGYRVAVVAIDPTSPFSGGSIMGDRLR 100


>gi|90581322|ref|ZP_01237118.1| adenylylsulfate kinase [Vibrio angustum S14]
 gi|90437432|gb|EAS62627.1| adenylylsulfate kinase [Vibrio angustum S14]
          Length = 207

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 35/115 (30%), Gaps = 28/115 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G   + 
Sbjct: 39  FTGLSGAGKSTVAGALENKLAEMGYHTY-----------------LLDGDNVRHGLCRDL 81

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  R +++  +   A      G I+L         A+       + L  D L
Sbjct: 82  GFSAEDRRENIRRIGEVATLMADAGLIVLS--------AFISPHREERQLVRDLL 128


>gi|91772724|ref|YP_565416.1| ABC transporter, ATPase subunit [Methanococcoides burtonii DSM
          6242]
 gi|91711739|gb|ABE51666.1| ABC transporter, ATPase subunit [Methanococcoides burtonii DSM
          6242]
          Length = 241

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
            G FI+  G  G+GK+T ++LL
Sbjct: 49 KKGEFIAIMGPSGSGKSTLMNLL 71


>gi|10954839|ref|NP_053259.1| hypothetical protein pTi-SAKURA_p020 [Agrobacterium tumefaciens]
 gi|159161958|ref|NP_396560.2| replication protein A [Agrobacterium tumefaciens str. C58]
 gi|6002494|gb|AAF00012.1|AF060155_1 RepA [Agrobacterium tumefaciens str. C58]
 gi|6498192|dbj|BAA87644.1| tiorf19 [Agrobacterium tumefaciens]
 gi|159141750|gb|AAK91001.2| replication protein A [Agrobacterium tumefaciens str. C58]
          Length = 405

 Score = 36.9 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  + Y V           +     +      D    E    ++AA
Sbjct: 132 GSGKTTTSAHLAQYLALQGYRVLAVDLDPQASLSALLGVL---PETDVGANET---LYAA 185

Query: 74  ARLDH----VENVIRPALMEGKILL 94
            R D     + +VIRP   +G  L+
Sbjct: 186 IRYDDTRRPLRDVIRPTYFDGLHLV 210


>gi|332159426|ref|YP_004424705.1| ATPase [Pyrococcus sp. NA2]
 gi|331034889|gb|AEC52701.1| ATPase [Pyrococcus sp. NA2]
          Length = 601

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+ ++  G  GAGKTT +  L  +       V    +P      E  
Sbjct: 260 GILVA--GPPGAGKTTFVQALAEWYASMGRIVKTMEKPRDLQVREEI 304


>gi|332160366|ref|YP_004296943.1| adenylylsulfate kinase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318604400|emb|CBY25898.1| adenylylsulfate kinase [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325664596|gb|ADZ41240.1| adenylylsulfate kinase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330859876|emb|CBX70207.1| adenylyl-sulfate kinase [Yersinia enterocolitica W22703]
          Length = 216

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 48  FTGLSGSGKSTVAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 90

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R +++     V +  +  G ++L         A+     + + +  D L   + 
Sbjct: 91  GFTDADRRENIRRVGEVAKLMVDAGLVVLT--------AFISPHRAERKMVRDML---AS 139

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            +      + +D P+ I   R
Sbjct: 140 GQF---IEVFVDTPLAICEAR 157


>gi|315126547|ref|YP_004068550.1| cytidine monophosphate (CMP) kinase; belong to the ubiquitous
          class of nucleotide kinase [Pseudoalteromonas sp.
          SM9913]
 gi|315015061|gb|ADT68399.1| cytidine monophosphate (CMP) kinase; belong to the ubiquitous
          class of nucleotide kinase [Pseudoalteromonas sp.
          SM9913]
          Length = 236

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 13/89 (14%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG-AE 65
          I+ +G  G+GK T   LL   L    +DV          +    R + L+    +     
Sbjct: 9  ITVDGPSGSGKGTVCRLLAEKL---GWDVL--------DSGAIYRVLSLAALHHQIALDN 57

Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILL 94
           EA+V  AA LD V+ +I      GKI+L
Sbjct: 58 EEALVPLAANLD-VQFLIDSDTNAGKIIL 85


>gi|257868417|ref|ZP_05648070.1| ABC transporter [Enterococcus gallinarum EG2]
 gi|257885873|ref|ZP_05665526.1| ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889184|ref|ZP_05668837.1| ABC transporter [Enterococcus faecium 1,141,733]
 gi|257897419|ref|ZP_05677072.1| ABC transporter [Enterococcus faecium Com12]
 gi|257900274|ref|ZP_05679927.1| ABC transporter [Enterococcus faecium Com15]
 gi|293572146|ref|ZP_06683152.1| sulfate/thiosulfate import ATP-binding protein CysA [Enterococcus
          faecium E980]
 gi|257802581|gb|EEV31403.1| ABC transporter [Enterococcus gallinarum EG2]
 gi|257821729|gb|EEV48859.1| ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825256|gb|EEV52170.1| ABC transporter [Enterococcus faecium 1,141,733]
 gi|257833984|gb|EEV60405.1| ABC transporter [Enterococcus faecium Com12]
 gi|257838186|gb|EEV63260.1| ABC transporter [Enterococcus faecium Com15]
 gi|291607780|gb|EFF37096.1| sulfate/thiosulfate import ATP-binding protein CysA [Enterococcus
          faecium E980]
          Length = 217

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N G  I F G  G+GK+T + L+   L
Sbjct: 29 NKGEVIVFSGPSGSGKSTLLKLIGTLL 55


>gi|257865219|ref|ZP_05644872.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257871543|ref|ZP_05651196.1| ABC transporter [Enterococcus casseliflavus EC10]
 gi|257799153|gb|EEV28205.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257805707|gb|EEV34529.1| ABC transporter [Enterococcus casseliflavus EC10]
          Length = 217

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N G  I F G  G+GK+T + L+   L
Sbjct: 29 NKGEVIVFSGPSGSGKSTLLKLIGTLL 55


>gi|229134459|ref|ZP_04263272.1| hypothetical protein bcere0014_33700 [Bacillus cereus BDRD-ST196]
 gi|228649080|gb|EEL05102.1| hypothetical protein bcere0014_33700 [Bacillus cereus BDRD-ST196]
          Length = 195

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 23/142 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT    L+++     Y+          P  E  + + L     E G   
Sbjct: 8   ISLQGPMASGKTTLAKRLEQYELSIIYE-------NPYPIVEKRKELHLDMNSKE-GFIT 59

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLDS 119
              +F  A       +I    ++  +++ DR       +        G+    +    D 
Sbjct: 60  NQKMFIEA------KIIEFQNVKSSVVIFDRGPEDIEFYTLFYPKMIGKEWGIETELKDE 113

Query: 120 LQEISVQEVMPDCTIILDLPVD 141
           L ++  +E   D    LD+  +
Sbjct: 114 LYKL--RECRSDAIFYLDVSKE 133


>gi|229151851|ref|ZP_04280050.1| hypothetical protein bcere0011_33930 [Bacillus cereus m1550]
 gi|228631664|gb|EEK88294.1| hypothetical protein bcere0011_33930 [Bacillus cereus m1550]
          Length = 195

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 25/140 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ + V     P   P  E  + + L           
Sbjct: 8   ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 57  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112

Query: 119 SLQEISVQEVMPDCTIILDL 138
            L ++  +E   D    LD+
Sbjct: 113 ELYKL--RECRSDVIFYLDV 130


>gi|223934010|ref|ZP_03625965.1| ABC transporter related protein [Streptococcus suis 89/1591]
 gi|330833656|ref|YP_004402481.1| ABC transporter-like protein [Streptococcus suis ST3]
 gi|223897324|gb|EEF63730.1| ABC transporter related protein [Streptococcus suis 89/1591]
 gi|329307879|gb|AEB82295.1| ABC transporter related protein [Streptococcus suis ST3]
          Length = 594

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 30/104 (28%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  ++  G  G+GKTT ++L+ RF       V               R   L    D+ 
Sbjct: 380 KGKMVAVVGPTGSGKTTIMNLINRFYDVNGGSVAF--------DGRDIREYDLDSLRDKV 431

Query: 63  G-AEAEAIVFA---------------------AARLDHVENVIR 84
           G    E+++F+                     AAR  H+ + I 
Sbjct: 432 GIVLQESVLFSGTIADNIRFGDESISQEMVETAARATHIHDFIM 475


>gi|254418253|ref|ZP_05031977.1| TOBE domain family [Brevundimonas sp. BAL3]
 gi|196184430|gb|EDX79406.1| TOBE domain family [Brevundimonas sp. BAL3]
          Length = 370

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 36/210 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRK------NYDVHVTREPGGTPAAEAARHVLLSC 57
           G F+ F G  G GK+T +  +    +           V     P     A   +   L  
Sbjct: 37  GEFVVFVGPSGCGKSTLLRTIAGLEEATTGQVSIGDRVVNDLSPSDRGIAMVFQSYALYP 96

Query: 58  GVDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHL 115
            +  +   A  + +    R + ++  +R A     + + D +LD    A  G +     +
Sbjct: 97  HMTAYENMAFGLKLAKTDRAE-IDRRVRAAAEA--LSITD-YLDRKPKAMSGGQRQRVAI 152

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMI---H 170
               ++E       PD   + D P+       RV+ RY           E K  MI   H
Sbjct: 153 GRAIVRE-------PD-VFLFDEPLSNLDAALRVRMRYEFARLHA----ELKTTMIYVTH 200

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
           ++     + +A    DR  +++     + V
Sbjct: 201 DQVEA--MTLA----DRIVVLNGGR-IEQV 223


>gi|171056826|ref|YP_001789175.1| ABC transporter-like protein [Leptothrix cholodnii SP-6]
 gi|170774271|gb|ACB32410.1| ABC transporter-related protein [Leptothrix cholodnii SP-6]
          Length = 350

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI F G  G GK+T + L+ 
Sbjct: 26 INPGEFIVFVGPSGCGKSTLLRLIA 50


>gi|167766963|ref|ZP_02439016.1| hypothetical protein CLOSS21_01480 [Clostridium sp. SS2/1]
 gi|167710938|gb|EDS21517.1| hypothetical protein CLOSS21_01480 [Clostridium sp. SS2/1]
          Length = 465

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++F G  G GKTT + +L 
Sbjct: 31 INEGEFVTFLGPSGCGKTTILRMLA 55


>gi|156937549|ref|YP_001435345.1| cytidylate kinase [Ignicoccus hospitalis KIN4/I]
 gi|166220121|sp|A8AAI6|KCY_IGNH4 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|156566533|gb|ABU81938.1| cytidylate kinase, putative [Ignicoccus hospitalis KIN4/I]
          Length = 172

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 64/207 (30%), Gaps = 44/207 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +   G  G+GK+T    L   L               E  G    E     L    +D  
Sbjct: 4   VVISGPPGSGKSTVAKKLASELGLRFVSAGSVFRKLAEEIGVSLLELNEMALKDPEIDL- 62

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                           ++ ++      G +++         A+ G   ++ +  ++    
Sbjct: 63  ---------------RIDRMVLEEARRGNVVI--------EAHLGGWVAAPYADVN---- 95

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-LDIA 181
                      + L  P++   KR+  R  +     L+    ++ +   + R+++  D+A
Sbjct: 96  -----------VYLTAPLEERAKRIARRDGISYEEALEEILSREEVQWIRFRKLYGFDVA 144

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208
             +     +  +    ++V   I  ++
Sbjct: 145 SLEIFDLVVNTALMGPEAVVETIKRML 171


>gi|108800882|ref|YP_641079.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium sp. MCS]
 gi|119870022|ref|YP_939974.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium sp. KMS]
 gi|108771301|gb|ABG10023.1| adenylylsulfate kinase [Mycobacterium sp. MCS]
 gi|119696111|gb|ABL93184.1| adenylylsulfate kinase / sulfate adenylyltransferase subunit 1
           [Mycobacterium sp. KMS]
          Length = 619

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 17/82 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G  + F G+ G+GK++    +++ L  +    +                 +L     
Sbjct: 445 LSRGRTVWFTGLSGSGKSSVAVRVEQKLLERGCPAY-----------------VLDGDNL 487

Query: 61  EFGAEAEAIVFAAARLDHVENV 82
             G  A+     A R +++  +
Sbjct: 488 RHGLNADLGFSMADRAENLRRL 509


>gi|325279592|ref|YP_004252134.1| Adenylate kinase [Odoribacter splanchnicus DSM 20712]
 gi|324311401|gb|ADY31954.1| Adenylate kinase [Odoribacter splanchnicus DSM 20712]
          Length = 190

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 70/216 (32%), Gaps = 41/216 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDE 61
           I+  G  GAGK T    +                       +  R  +     L    +E
Sbjct: 4   IALFGPPGAGKGTQAKKIVEK-----------YNLAHLSTGDMIRKEIAEGTELGKIAEE 52

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A  E +       + V  +I  ++ + + +  + FL   +     +       L+  +
Sbjct: 53  IIARGELL-----SDEFVVRLIENSMAQHRGV--NGFLFDGFPRTVAQAEILDRMLEK-E 104

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-- 179
              ++ +     I + +P +   +R+  R  +   A  +     +  I ++ R+ + D  
Sbjct: 105 GTPLKGL-----ICIHVPFEELKRRMLERAKIEGRADDN-----EEAIAKRFRE-YNDKT 153

Query: 180 --IARNQPDRCHIVD--SAHSFQSVATNILNIVWEL 211
             +A +   +   +D       + V   I   + E+
Sbjct: 154 VHVANHYKKKGVHIDVEGNCPVEEVFNAITKAIEEM 189


>gi|319759100|gb|ADV71042.1| ABC-type multidrug transport system, ATPase and permease component
           [Streptococcus suis JS14]
          Length = 594

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 31/111 (27%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  ++  G  G+GKTT ++L+ RF       V               R   L    ++ 
Sbjct: 380 KGKMVAVVGPTGSGKTTIMNLITRFYDVNGGSVAF--------DGRDIREYDLDSLRNKV 431

Query: 63  G-AEAEAIVFA---------------------AARLDHVENVIRPALMEGK 91
           G    E+++F+                     AAR  H+ + I  +L EG 
Sbjct: 432 GIVLQESVLFSGTIADNIRFGDESISQEMVETAARATHIHDFIM-SLPEGY 481


>gi|268609859|ref|ZP_06143586.1| ABC transporter, ATP-binding/permease protein [Ruminococcus
           flavefaciens FD-1]
          Length = 583

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           ++ G FI+  G  G+GK+T   L+   
Sbjct: 361 IHKGEFIALVGPSGSGKSTVARLIASL 387


>gi|239834463|ref|ZP_04682791.1| polyamine ABC transporter, ATP-binding protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239822526|gb|EEQ94095.1| polyamine ABC transporter, ATP-binding protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 353

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 26/164 (15%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55
            G F+SF G  G GKTT + ++  F       ++    DV   + P         +   L
Sbjct: 28  KGEFVSFLGPSGCGKTTVLRMIAGFEMPDSGAIEINGKDVVDLK-PNQRNIGMVFQAYAL 86

Query: 56  SCGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
              +      +  +  A    A +D     +   +      L DR+      YQ      
Sbjct: 87  FPNMTVAQNVSFGLRVAGKSKAEIDATVKEMLGLIRLDH--LADRYP-----YQMSGGQQ 139

Query: 113 QHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154
           Q + L   + ++     P   ++LD  L       R+  R  +R
Sbjct: 140 QRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177


>gi|239833879|ref|ZP_04682207.1| ABC transporter related [Ochrobactrum intermedium LMG 3301]
 gi|239821942|gb|EEQ93511.1| ABC transporter related [Ochrobactrum intermedium LMG 3301]
          Length = 378

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++  G  G+GKTT + L+ 
Sbjct: 41 LAKGRFLTILGPSGSGKTTLLRLIA 65


>gi|167044181|gb|ABZ08863.1| putative SRP54-type protein, GTPase domain protein [uncultured
           marine crenarchaeote HF4000_APKG5E24]
          Length = 464

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 22/110 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARH---------VLL 55
            I F GI G GKTT I+ +   LQ+    V V         A E  R          +  
Sbjct: 107 LILFVGINGTGKTTTIAKIANLLQKNKISVVVAAADTFRAGAIEQLREHINKLNLKLIAQ 166

Query: 56  SCGVDEFGAEAEAIVFA------------AARLDHVENVIRPALMEGKIL 93
           + G D      +A+++A            A R+   +N++       K++
Sbjct: 167 NYGSDPAAVAHDALLYAKSHKVDCVLIDSAGRMQTNKNLMEQIAKISKVV 216


>gi|167757057|ref|ZP_02429184.1| hypothetical protein CLORAM_02606 [Clostridium ramosum DSM 1402]
 gi|237735872|ref|ZP_04566353.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167703232|gb|EDS17811.1| hypothetical protein CLORAM_02606 [Clostridium ramosum DSM 1402]
 gi|229381617|gb|EEO31708.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 234

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          N G F+   G  GAGKTT ++LL
Sbjct: 32 NKGEFVVIVGPSGAGKTTILNLL 54


>gi|153853696|ref|ZP_01995052.1| hypothetical protein DORLON_01043 [Dorea longicatena DSM 13814]
 gi|149753446|gb|EDM63377.1| hypothetical protein DORLON_01043 [Dorea longicatena DSM 13814]
          Length = 366

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 22/102 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +  G  ++  G  GAGK+T +  + R L+    +V++  E          R +       
Sbjct: 28  IKKGEIVTLIGPNGAGKSTILKSITRQLKLIGGEVYIDSE--------EIRKL----SYK 75

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDS 101
           E   +A  ++            ++P LM    I+   R+  +
Sbjct: 76  EMAVKAAVML---------TERMKPELMTCHDIVATGRYPYT 108


>gi|71909615|ref|YP_287202.1| arginine/ornithine transport system ATPase [Dechloromonas aromatica
           RCB]
 gi|71849236|gb|AAZ48732.1| methylmalonyl-CoA mutase metallochaperone MeaB [Dechloromonas
           aromatica RCB]
          Length = 329

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 13/70 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREP-----GGTPAAEAARHVLLSCGVD 60
           I   G+ GAGK+T I  L  +L  +      +  +P     GG+   +  R       ++
Sbjct: 60  IGISGVPGAGKSTFIEALGVWLIEQGKKLAVLAVDPSSSVSGGSILGDKTR-------ME 112

Query: 61  EFGAEAEAIV 70
           +     EA +
Sbjct: 113 QLCQREEAFI 122


>gi|21231670|ref|NP_637587.1| transport protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66768207|ref|YP_242969.1| transport protein [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113367|gb|AAM41511.1| transport protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573539|gb|AAY48949.1| transport protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 577

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 26/143 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE----FGAEA 66
           G  G+GK+T +  L  +L+ +     +   PG        R  L    + +       +A
Sbjct: 404 GPSGSGKSTLLEGLAGWLELEGGS--LAVRPGVRIGYAPQRPYLFHGSIADNLRLADPQA 461

Query: 67  -EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            EA + A A    V   +   L +G   ++ +R         G   S       +L  + 
Sbjct: 462 NEARLRAVADAAQVLRFVTH-LPDGLDTVIGER---------GFGLSGGEARRVALARLL 511

Query: 125 VQEVMPDCTIILD-----LPVDI 142
           ++   PD  ++LD     L  D 
Sbjct: 512 LR--EPD-VLLLDEPTAFLDPDT 531


>gi|86152880|ref|ZP_01071085.1| guanylate kinase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85843765|gb|EAQ60975.1| guanylate kinase [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  +   G  GAGK+T +  L    + + Y      TR+P          H + S    
Sbjct: 2   QGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGIHYHFI-SHEEF 60

Query: 61  EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
           + G +++  +  A   ++         + AL  GKI++ D
Sbjct: 61  QKGIDSDHFLEWARVHENFYGTSLKHTQDALDNGKIVVFD 100


>gi|325957954|ref|YP_004289420.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
 gi|325329386|gb|ADZ08448.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21]
          Length = 447

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G++G+GKTT I  L ++LQ+K ++  +       PAA      L          + 
Sbjct: 106 ILFMGLQGSGKTTSIGKLTKYLQKKGFNPAIVSTDTWRPAAYEQLLQLTEPMNVPVYGDH 165

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCD 96
           E        LD     ++ A  +  +++ D
Sbjct: 166 E----NKDALDLARTGLKAA-KKNDVIIVD 190


>gi|312131892|ref|YP_003999232.1| adenylate kinase [Leadbetterella byssophila DSM 17132]
 gi|311908438|gb|ADQ18879.1| adenylate kinase [Leadbetterella byssophila DSM 17132]
          Length = 190

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 42/216 (19%)

Query: 5   LF-ISFEGIEGAGKTTHISLLKR-----FLQRKN-YDVHVTREPGGTPAAEAARHVLLSC 57
           +F +   G  GAGK T    +        L   + +  H+T     T   +  + +L   
Sbjct: 1   MFNLVIFGPPGAGKGTQSEKIIDKYNLVHLSTGDMFRSHIT---NDTELGKKVKEILADG 57

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            +    +   +++         E V +    +G   + D F          R   Q   L
Sbjct: 58  KLVP-DSITISMLE--------EEVQKNPNAKGF--IFDGF---------PRTVPQAEAL 97

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           D+   +  +    D  + LD+  D+   R+  R  +   A  D    + ++  ++  + F
Sbjct: 98  DAF--LEGKGFKVDLVLQLDVTQDVIKARIAERQKVSGRADDD---AEKLL--KRIDEYF 150

Query: 178 LDIARNQP-----DRCHIVDSAHSFQSVATNILNIV 208
                  P      +   ++     +++   I   +
Sbjct: 151 DKTIHVLPYYQNQGKVTTINGVGEIETIFGQISEAI 186


>gi|296270708|ref|YP_003653340.1| cysteine ABC transporter permease/ATP-binding protein CydC
           [Thermobispora bispora DSM 43833]
 gi|296093495|gb|ADG89447.1| ABC transporter, CydDC cysteine exporter (CydDC- E) family,
           permease/ATP-binding protein CydC [Thermobispora bispora
           DSM 43833]
          Length = 579

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 1/80 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69
           G  G+GKTT  ++L RFL+     V +        A E  R V+ L        A     
Sbjct: 369 GPSGSGKTTLTAVLLRFLEPAGGRVTLNGVDLRELAGEDVRRVVGLCAQDAHLFATTIGE 428

Query: 70  VFAAARLDHVENVIRPALME 89
               AR D  +  +R AL  
Sbjct: 429 NIRLARRDATDEEVREALRR 448


>gi|293375410|ref|ZP_06621691.1| adenylate kinase [Turicibacter sanguinis PC909]
 gi|325844454|ref|ZP_08168181.1| adenylate kinase [Turicibacter sp. HGF1]
 gi|292645963|gb|EFF63992.1| adenylate kinase [Turicibacter sanguinis PC909]
 gi|325489128|gb|EGC91512.1| adenylate kinase [Turicibacter sp. HGF1]
          Length = 216

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 68/235 (28%), Gaps = 58/235 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G  GAGK T               +  T +       +  R  +         A+ 
Sbjct: 3   IVFMGPPGAGKGTQAE-----------KIIETYQIPHISTGDMFRKAIKDQTELGMEAKR 51

Query: 67  EAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEIS 124
                 A   DHV   +++  L E      D    S +   G   +      LD +  ++
Sbjct: 52  YMDQ-GALVPDHVTIGIVKDRLSE-----SD--CKSGFLLDGFPRTVDQAKALDEI--LT 101

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYF---------ERKDVMIHEK- 172
             +   D  I +D+ ++I  +R+  R   R         F         ++    ++++ 
Sbjct: 102 SLDSKIDYVINIDVDLNILKERLTGRRICRSCGATYHKIFNPSAVEGVCDKCGGELYQRK 161

Query: 173 --------------RRQI-----FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                           Q      +  +A         ++   S   V   I N++
Sbjct: 162 DDNEETVGNRLDVYVNQTKPLLDYYSLA----GNLVNINGQQSIDLVFEEIQNVL 212


>gi|241890123|ref|ZP_04777421.1| signal recognition particle-docking protein FtsY [Gemella
           haemolysans ATCC 10379]
 gi|241863745|gb|EER68129.1| signal recognition particle-docking protein FtsY [Gemella
           haemolysans ATCC 10379]
          Length = 353

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L+++   V +    G T  A A     L       GA+     
Sbjct: 146 GVNGVGKTTSIGKLAHNLKKEGKKVLIAA--GDTFRAGAIDQ--LDVWAKRSGADIVKSH 201

Query: 71  FAAARLDHVENVIRPALMEGKIL-LCD 96
             A     + + I+ A  +G  + LCD
Sbjct: 202 EGADSAAIIFDAIQSAKAKGYDVLLCD 228


>gi|221481734|gb|EEE20110.1| ATP-binding cassette, putative [Toxoplasma gondii GT1]
          Length = 1005

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           SG F+   G  G+GK+T  +LL R  + +  ++     P G+  ++  R ++        
Sbjct: 753 SGAFLGILGPSGSGKSTLAALLLRLYEPEEGEIQFNNTPIGSLDSQFVRSLI-------- 804

Query: 63  GAEA-EAIVFAAARLDHVE 80
                E ++ A +  ++VE
Sbjct: 805 SPVTQENLLLAKSVRENVE 823


>gi|196019458|ref|XP_002118984.1| hypothetical protein TRIADDRAFT_9728 [Trichoplax adhaerens]
 gi|190577444|gb|EDV18529.1| hypothetical protein TRIADDRAFT_9728 [Trichoplax adhaerens]
          Length = 196

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          N+G FI+  G  G GKTT + L+
Sbjct: 13 NNGEFIAILGPSGCGKTTLLRLI 35


>gi|157736280|ref|YP_001488963.1| molybdenum ABC transporter, ATP-binding protein [Arcobacter
          butzleri RM4018]
 gi|315635409|ref|ZP_07890675.1| molybdate ABC superfamily ATP binding cassette transporter, ABC
          protein [Arcobacter butzleri JV22]
 gi|157698134|gb|ABV66294.1| molybdenum ABC transporter, ATP-binding protein [Arcobacter
          butzleri RM4018]
 gi|315480167|gb|EFU70834.1| molybdate ABC superfamily ATP binding cassette transporter, ABC
          protein [Arcobacter butzleri JV22]
          Length = 284

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++  G+ G+GKTT + +L 
Sbjct: 25 INKGEFVALSGLSGSGKTTLLRILA 49


>gi|157147006|ref|YP_001454325.1| hypothetical protein CKO_02783 [Citrobacter koseri ATCC BAA-895]
 gi|157084211|gb|ABV13889.1| hypothetical protein CKO_02783 [Citrobacter koseri ATCC BAA-895]
          Length = 162

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 132 CTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
             I L  PV   + R++      LR +        +   + E+R  ++ + A       +
Sbjct: 77  IVIYLSAPVSTLVNRLEAAPEEGLRPTLTGKPLSEEVQEVLEQRDALYREAAH------Y 130

Query: 190 IVDSAHSFQSVATNILNIVWELVQK 214
           I+D++H+   V + IL  + +  Q+
Sbjct: 131 IIDASHAPDQVVSEILAALSQTAQR 155


>gi|118586609|ref|ZP_01544049.1| ABC-type multidrug/protein/lipid transport system, ATPase component
           [Oenococcus oeni ATCC BAA-1163]
 gi|118432924|gb|EAV39650.1| ABC-type multidrug/protein/lipid transport system, ATPase component
           [Oenococcus oeni ATCC BAA-1163]
          Length = 614

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
            G  I+  G  GAGKTT I+LL+RF
Sbjct: 399 KGQMIAIVGPTGAGKTTIINLLERF 423


>gi|117620177|ref|YP_858034.1| adenylylsulfate kinase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|229484851|sp|A0KP33|CYSC_AERHH RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|117561584|gb|ABK38532.1| adenylylsulfate kinase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 197

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 58/213 (27%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T    L++ L       +                 LL       G   
Sbjct: 27  IWFTGLSGAGKSTLAGALEQALAASGKHTY-----------------LLDGDNVRHGLCG 69

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     AAR +++     V +  +  G I+L         A+     + + L  + + E 
Sbjct: 70  DLGFDDAARQENIRRVGEVAKLMVDAGLIVLT--------AFISPFRAERELVRNLVGEG 121

Query: 124 SVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLDYFERKDVMIHEKRRQI 176
              E      + +D P+ +  +R             +R    +D                
Sbjct: 122 EFVE------VFVDAPLSVCEERDPKGLYKKARAGEIRNFTGID--------------SA 161

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
           +   A  QP+  H++++     ++   +L  + 
Sbjct: 162 YE--APEQPE-IHLLNAGKPVAALVDELLTALR 191


>gi|115970896|ref|XP_001192023.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 483

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 5   LF---ISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLS--- 56
           +F   I+  G  G+GKT+ +++++   Q       V V+R  G T  +    +V+LS   
Sbjct: 126 MFRKPIAIHGPSGSGKTSIMAMVQENAQMHLGRPCVVVSRFLGTTSQSSTIINVILSIAQ 185

Query: 57  --CGVDEFGAEAEAI 69
             C   +    +E I
Sbjct: 186 QICAAFQIHDNSELI 200


>gi|94676770|ref|YP_588667.1| adenylylsulfate kinase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219920|gb|ABF14079.1| adenylylsulfate kinase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 207

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 28/115 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  S L++ L       +                 LL       G  ++ 
Sbjct: 39  FTGLSGAGKSTLASALEQALYHHGVSTY-----------------LLDGDNIRHGLCSDL 81

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 R +++     V +  L  G I+L         A+     + + +  D L
Sbjct: 82  DFSDNGRHENIRRVGEVAKLMLDAGLIVLS--------AFISPHRAERQMVRDML 128


>gi|91783338|ref|YP_558544.1| adenylylsulfate kinase [Burkholderia xenovorans LB400]
 gi|123062942|sp|Q13ZJ7|CYSC_BURXL RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
          AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|91687292|gb|ABE30492.1| adenylylsulfate kinase [Burkholderia xenovorans LB400]
          Length = 179

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 14/85 (16%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGK+T  + L   L+       V          +  R  L +          E + 
Sbjct: 13 GLSGAGKSTLANALHLRLKEAGQAAIVL-------DGDVLRRGLNADLGFTPEDRTENL- 64

Query: 71 FAAARLDHVENVIRPALMEGKILLC 95
              R+ HV  +    + +G +++ 
Sbjct: 65 ---RRVAHVAAL---FMQQGFVVIA 83


>gi|15791349|ref|NP_281173.1| ATPase [Halobacterium sp. NRC-1]
 gi|169237109|ref|YP_001690309.1| ATPase [Halobacterium salinarum R1]
 gi|10581996|gb|AAG20653.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167728175|emb|CAP14963.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 619

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 11/64 (17%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G+ I+  G  GAGK+T    +  FL      V    +P         R + L   V ++
Sbjct: 261 RGVLIA--GAPGAGKSTFAQAVAEFLADAGNVVKTMEKP---------RDLQLDEEVTQY 309

Query: 63  GAEA 66
            A +
Sbjct: 310 TALS 313


>gi|15966983|ref|NP_387336.1| cytochrome c biogenesis protein CcmA [Sinorhizobium meliloti
          1021]
 gi|307302451|ref|ZP_07582208.1| heme exporter protein CcmA [Sinorhizobium meliloti BL225C]
 gi|307316219|ref|ZP_07595663.1| heme exporter protein CcmA [Sinorhizobium meliloti AK83]
 gi|47605525|sp|Q92L55|CCMA_RHIME RecName: Full=Cytochrome c biogenesis ATP-binding export protein
          CcmA; AltName: Full=Heme exporter protein A
 gi|15076256|emb|CAC47809.1| Putative heme exporter A (cytochrome C-type biogenesis
          ATP-binding protein) ABC transporter [Sinorhizobium
          meliloti 1021]
 gi|306898059|gb|EFN28801.1| heme exporter protein CcmA [Sinorhizobium meliloti AK83]
 gi|306903121|gb|EFN33711.1| heme exporter protein CcmA [Sinorhizobium meliloti BL225C]
          Length = 207

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 8  SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
             G  GAGK+T + +L   L+ +   V +   P G    E  R +
Sbjct: 32 VVTGPNGAGKSTLLRVLAGLLEPEGGRVRLEDGPSGF---EHPREL 74


>gi|15612883|ref|NP_241186.1| uridine kinase [Bacillus halodurans C-125]
 gi|10172933|dbj|BAB04039.1| BH0320 [Bacillus halodurans C-125]
          Length = 205

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 6  FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          FI   +G+ GAGKTT +  L R L+  +++V V   P      E  + 
Sbjct: 20 FIVGIDGLGGAGKTTFVKKLSRELKNWHHEVIVL--PLDDYIVETKKR 65


>gi|14520304|ref|NP_125779.1| putative molybdopterin-guanine dinucleotide biosynthesis protein
          MobB/FeS domain-containing protein protein [Pyrococcus
          abyssi GE5]
 gi|5457519|emb|CAB49010.1| mobB-like molybdopterin-guanine dinucleotide biosynthesis protein
          B related [Pyrococcus abyssi GE5]
          Length = 244

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 13/67 (19%)

Query: 15 AGKTTHISLLKRFLQRKNYDVH--------VTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          +GKTT I  + R L+ + Y V           +E   T        ++L    D      
Sbjct: 13 SGKTTTIEKVARILKERGYRVAIVKSMHSNFDKEGTDTWKFSRVADLVLVRAQD-----T 67

Query: 67 EAIVFAA 73
          +A++F A
Sbjct: 68 DALLFKA 74


>gi|67922633|ref|ZP_00516139.1| ABC transporter [Crocosphaera watsonii WH 8501]
 gi|67855561|gb|EAM50814.1| ABC transporter [Crocosphaera watsonii WH 8501]
          Length = 256

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 32/150 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEFGAEAEA 68
           G  GAGKTT  +LL  F++    +V    EP    +P   A +  + +  V    +    
Sbjct: 41  GPNGAGKTTLFNLLSNFIRPDGGEVLFDGEPIQHLSPHKIALQGCIRTFQVARVLSRLTV 100

Query: 69  I--VFAAARLDHVENVIRPALMEGKI-------------------LLCDRFLDSSYAYQG 107
           +  +  A +    EN ++  L  G++                   L+  R       Y G
Sbjct: 101 LENMLLATQKQTGENFLQLWLKRGQVKQEERENKEKALDILKSVGLIEKRHD-----YAG 155

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILD 137
                Q   L+  + +      P   I+LD
Sbjct: 156 ALSGGQRKLLEMARTLMT---RPKL-ILLD 181


>gi|223932495|ref|ZP_03624496.1| ABC transporter related protein [Streptococcus suis 89/1591]
 gi|330833071|ref|YP_004401896.1| ABC transporter-like protein [Streptococcus suis ST3]
 gi|223898766|gb|EEF65126.1| ABC transporter related protein [Streptococcus suis 89/1591]
 gi|329307294|gb|AEB81710.1| ABC transporter related protein [Streptococcus suis ST3]
          Length = 235

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 27/87 (31%), Gaps = 8/87 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLS 56
           + +G  I   G  G+GKTT I L+   LQ +   V               +       L 
Sbjct: 30  LTAGKIIGLLGPNGSGKTTMIKLINGLLQPEYGQVLINGRTPSPETKAIVSYLPDTTYLD 89

Query: 57  CGVDEFGAEAEAIVFAAA----RLDHV 79
             +    A      F A     R  H+
Sbjct: 90  EHMKVLEAITFFEDFYADFDKERALHL 116


>gi|319902795|ref|YP_004162523.1| uridine kinase [Bacteroides helcogenes P 36-108]
 gi|319417826|gb|ADV44937.1| uridine kinase [Bacteroides helcogenes P 36-108]
          Length = 202

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 26/166 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 2   LIIGIAGGTGSGKTTVVRKIIESLPN-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              +++       HV       L EGK +        +Y+Y       + + ++  + I 
Sbjct: 61  FEWSLL-----SKHVA-----ILREGKSI-----EQPTYSYLTCTRQPETIHIEPREVII 105

Query: 125 VQEVMP----------DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           ++ ++           D  I +D   D  L RV  R  +      +
Sbjct: 106 IEGILALCDKKLRSMMDLKIFVDADPDERLIRVIQRDIIERGRTAE 151


>gi|319788220|ref|YP_004147695.1| adenylate kinase [Pseudoxanthomonas suwonensis 11-1]
 gi|317466732|gb|ADV28464.1| adenylate kinase [Pseudoxanthomonas suwonensis 11-1]
          Length = 188

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 67/214 (31%), Gaps = 39/214 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK  L         T         +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKETL---GVPHIST--------GDLLRAEVAAGSPLGLQAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                 AR + V + I   ++E   G+  +   F+   Y     +  +    L  + +  
Sbjct: 52  ----VMARGELVSDDILLGMLESRLGRDDVAKGFILDGYPRNLAQADALDGLLAKIGQ-- 105

Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
                P D  + LD+  D+ ++R+  R    E    D  E        KR Q++ D    
Sbjct: 106 -----PLDAVVQLDVATDLLVERIAGRAQA-EGRADDNPESV-----RKRLQVYNDSTAP 154

Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                        +D   +   +   IL  + + 
Sbjct: 155 VIGFFENRGTLTRIDGVGTMDEITARILAALKKA 188


>gi|315637188|ref|ZP_07892410.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Arcobacter butzleri JV22]
 gi|315478555|gb|EFU69266.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Arcobacter butzleri JV22]
          Length = 165

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          MN    +  F G   +GKTT I  +   LQ +++ V + +
Sbjct: 1  MNKKRLVVAFSGPSNSGKTTAIVKVASILQDQSFKVCIVK 40


>gi|299739000|ref|XP_001834960.2| DNA replication helicase dna2 [Coprinopsis cinerea okayama7#130]
 gi|298403575|gb|EAU86842.2| DNA replication helicase dna2 [Coprinopsis cinerea okayama7#130]
          Length = 1482

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+ G GKTT I+ L R L      V +      +      R +  S   +E G   E
Sbjct: 670 GMPGTGKTTVIAALIRVLVALGKTVLLASY-THSAVDSILRKLSESEEDEEKGQVTE 725


>gi|291559687|emb|CBL38487.1| spermidine/putrescine ABC transporter ATP-binding subunit
          [butyrate-producing bacterium SSC/2]
          Length = 465

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++F G  G GKTT + +L 
Sbjct: 31 INEGEFVTFLGPSGCGKTTILRMLA 55


>gi|257865447|ref|ZP_05645100.1| deoxyguanosine kinase [Enterococcus casseliflavus EC30]
 gi|257871782|ref|ZP_05651435.1| deoxyguanosine kinase [Enterococcus casseliflavus EC10]
 gi|257799381|gb|EEV28433.1| deoxyguanosine kinase [Enterococcus casseliflavus EC30]
 gi|257805946|gb|EEV34768.1| deoxyguanosine kinase [Enterococcus casseliflavus EC10]
          Length = 240

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 79/237 (33%), Gaps = 50/237 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I+  G  GAGK++    L + +  K         P      +     L     + +  
Sbjct: 2   LLIA--GTIGAGKSSLTDFLSKEMASK---------PFYENVEDNDVLPLFYSNPERYAF 50

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFL-----D 118
             +      + L      +R AL     ++ DR +   S  +    D  +   +     D
Sbjct: 51  LLQIFFLNKSFL-----GMREALSNDDNVI-DRSIYEDSLMFHLNADLGRIAPMEVEQYD 104

Query: 119 SLQEISVQEVM-------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           +L    ++E+        PD  + + + +D  ++R+  R    E    D           
Sbjct: 105 NLLNTMLRELEESAPLKHPDLMVHIKVSLDTMIERINKRGRSYEQIANDP---------- 154

Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVA-TNILNIVWELVQKRVSPL 219
                + ++ +   +            +D       VA  + L ++ E++Q++++ +
Sbjct: 155 TLYDYYKELNQRYDEWYENFDVCPKMQIDGDQ-LDFVANEDNLMVILEMIQEKLAEV 210


>gi|229165927|ref|ZP_04293692.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH621]
 gi|228617480|gb|EEK74540.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH621]
          Length = 218

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 17/191 (8%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I+  GI G   AGKTT  + L   L +   +   T     +       ++  +   +   
Sbjct: 19  IAI-GISGHGAAGKTTFANKLINQLNQNKVNYINTDPYIVSSNVRKYTNIHYTYQNENHY 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  A   +A  L  +E  ++  +  G     D +   ++ Y      S    +  ++ +
Sbjct: 78  DKMTACHPSAHHLSALERDVQ-MVRAG----LDFYTMDTH-YIKSELISSKNKVTIVEGM 131

Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           SV  + P   D  I      +  L R  +R  +   A ++Y  +     HE+RR  +   
Sbjct: 132 SVAFINPNLFDLKIYFYTDGETELMRRSSRDIIERGADINYLRKS----HEERRIQYEVF 187

Query: 181 ARNQPDRCHIV 191
                 R  I+
Sbjct: 188 MHPYSQRFDII 198


>gi|257052337|ref|YP_003130170.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Halorhabdus utahensis DSM 12940]
 gi|256691100|gb|ACV11437.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Halorhabdus utahensis DSM 12940]
          Length = 469

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 22/157 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G+GKTT  + +  +  +K     V +     P A            +E    A
Sbjct: 100 IVLAGLQGSGKTTSAAKIAWWFSKKGLRPAVIQTDTWRPGAYE--------QAEEMAERA 151

Query: 67  EAIVFAAARLDHVENVIRPALM---EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           E   +     D    + R  L    +  + + D            R + +   +D L++I
Sbjct: 152 EVDFYGDPDEDDAVKIARDGLEATDDADVQIVD---------TAGRHALEDGLIDELEDI 202

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 PD  +++ L   IG +  +      ++  +D
Sbjct: 203 ESVA-DPDHNLLV-LDAAIGQEAKEQASRFEDAVGID 237


>gi|166368465|ref|YP_001660738.1| adenylate kinase [Microcystis aeruginosa NIES-843]
 gi|166090838|dbj|BAG05546.1| adenylate kinase [Microcystis aeruginosa NIES-843]
          Length = 188

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 63/231 (27%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+  + + F G  G+GK T  + L   L         T         E  R  +      
Sbjct: 1   MSKRIGVIFLGPPGSGKGTQAAKLAESLT---IPHIST--------GEILRQAITEKTEL 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK----ILLCDRFLDSSYAYQGERDSSQHLF 116
              A+A          + +  +I+  L +       +L D F  +    Q     +    
Sbjct: 50  GQQAQAYVEKGELVPDELLLGLIQERLKQPDSAKGWIL-DGFPRT--VAQASFLDALLEE 106

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----------------LD 160
           L       V   +PD T+++        +R+  R    ++                  LD
Sbjct: 107 LADSYTFVVNLAVPD-TVLI--------ERLMQRGRQDDTKETISRRLQVYIDQTAPVLD 157

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           Y+ +K  + H                    +D      +V   +  +V  +
Sbjct: 158 YYGQKGTLNH--------------------IDGNQPMDAVTAALTAVVTPV 188


>gi|167525513|ref|XP_001747091.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774386|gb|EDQ88015.1| predicted protein [Monosiga brevicollis MX1]
          Length = 3765

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 25/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +   G  G+GK+   ++L+  L R            P   P     R  LL     +   
Sbjct: 1477 VVIVGPAGSGKSVVWNVLRSALARVQPHAVKSYVVNPKAMP-----RQQLLGRIDVDTRE 1531

Query: 65   EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              + ++ AA+R      V+R +L     ++CD                   +++SL  +
Sbjct: 1532 WFDGVLTAASR-----QVVRESLDRHSWIVCD-------------GDIDPEWIESLNSV 1572


>gi|161617562|ref|YP_001591527.1| hypothetical protein SPAB_05421 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161366926|gb|ABX70694.1| hypothetical protein SPAB_05421 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 583

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 13/81 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L    +DVH+T        +      L +  V 
Sbjct: 333 MGKG---------GVGKTTLAAAIAVRLADMGFDVHLTTSDPAAHLSTTLNGSLKNLQVS 383

Query: 61  EFGAEAEAIVFAAARLDHVEN 81
                 E   +      HV  
Sbjct: 384 RINPHDETERY----RQHVLE 400


>gi|114328824|ref|YP_745981.1| adenylylsulfate kinase [Granulibacter bethesdensis CGDNIH1]
 gi|114316998|gb|ABI63058.1| sulfate adenylyltransferase subunit 1 [Granulibacter bethesdensis
           CGDNIH1]
          Length = 625

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L  +    +                 LL       G   + 
Sbjct: 457 FTGLSGAGKSTVANLVEQKLLTQGCHTY-----------------LLDGDNLRHGLNKDL 499

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILL 94
               + R +++     V R     G I+L
Sbjct: 500 SFSQSDRRENIRRIAEVARLFHDSGLIVL 528


>gi|85373670|ref|YP_457732.1| TrwC protein [Erythrobacter litoralis HTCC2594]
 gi|84786753|gb|ABC62935.1| TrwC protein [Erythrobacter litoralis HTCC2594]
          Length = 970

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
           I+ +GI GAGK++ +  +   L+ +   V 
Sbjct: 474 IAVQGIAGAGKSSVLKPVAEVLRAEGRPVI 503


>gi|17986943|ref|NP_539577.1| metal chelate transport ATP-binding protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|17982588|gb|AAL51841.1| metal chelate transport ATP-binding protein [Brucella melitensis
           bv. 1 str. 16M]
          Length = 346

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60
             G FI   G  GAGKTT +  +   +          R+     AAE AR +  L    D
Sbjct: 115 KGGEFIGLVGPNGAGKTTLLRAIAGLVASSGQVSLAGRDLRHMGAAEKARSLAYLPQERD 174

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK--IL--LCDRFLDSSYAYQGERDSSQHLF 116
                +  ++ +  R       +   L      I+  + DR   S +  +   + S    
Sbjct: 175 VAWPVSVHMLVSLGRSAL--KPVFAGLDRQDEAIIEAVMDRMDVSRFGERSVMELSGGER 232

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM-IHEKRRQ 175
              L    + +  P   I+ D PV  GL        +   A L    R  +  +HE    
Sbjct: 233 ARVLIARVLAQDTP--VILADEPVA-GLDPAHQLTLMETFAELAREGRTVIASLHE---- 285

Query: 176 IFLDIARNQPDRCHIVD-----SAHSFQSVA 201
             L +A     R  ++D     +  +   V 
Sbjct: 286 --LSLAAQHCSRLILLDHGCMAADGTPAEVF 314


>gi|66824703|ref|XP_645706.1| hypothetical protein DDB_G0271248 [Dictyostelium discoideum AX4]
 gi|60473815|gb|EAL71754.1| hypothetical protein DDB_G0271248 [Dictyostelium discoideum AX4]
          Length = 415

 Score = 36.9 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I   G  GAGK+T I    ++L    + V  +  +P     GG+   +  R   L+   +
Sbjct: 137 IGISGPPGAGKSTFIEAFGKYLTSLGHRVAVLAIDPSSVRSGGSILGDKTRMTELAVDEN 196

Query: 61  EF 62
            +
Sbjct: 197 AY 198


>gi|329940480|ref|ZP_08289761.1| putative ATP/GTP-binding protein [Streptomyces griseoaurantiacus
           M045]
 gi|329300541|gb|EGG44438.1| putative ATP/GTP-binding protein [Streptomyces griseoaurantiacus
           M045]
          Length = 172

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 26/162 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI G+GKT     L + L           E                   +      E + 
Sbjct: 11  GITGSGKT----HLAQALAATGLVRLSVDEEVHRLHGRYGVDYPEHGYFEREAPAVETV- 65

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R    E      L  G+ ++ D        +   R S +  +  +++       +P
Sbjct: 66  ----RAQLTEQ-----LRAGRAVVLD--------HGLWRRSDREEWKKTVRA---AGALP 105

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
              + L    +  L+R+  R   +++  L+           +
Sbjct: 106 -LLVYLPASREELLRRLAARNQRKDANALNVTSEALDDFFAR 146


>gi|326422495|gb|EGD71892.1| putative signal recognition particle protein SRP54 [Candidatus
           Parvarchaeum acidophilus ARMAN-5_'5-way FS']
          Length = 437

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 22/137 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G+ G+GKTT  + L  + +++ Y V +       PAA +    +     V   G  ++ I
Sbjct: 104 GLFGSGKTTTAAKLANYYRKRGYRVLLLGLDTFRPAAYQQLEQLSKQINVKIMGGGSDPI 163

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
               + +   +N          I++ D            RD      +  ++ I    + 
Sbjct: 164 KAIKSAMGSFKNF--------DIIIAD---------SAGRDILDKELIKEIKGI-RDTLK 205

Query: 130 P-DCTIILDLPVDIGLK 145
           P + T++  +P D+G  
Sbjct: 206 PNNVTLV--IPADLGQN 220


>gi|302024572|ref|ZP_07249783.1| ABC transporter ATP-binding membrane protein [Streptococcus suis
           05HAS68]
          Length = 594

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 31/111 (27%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  ++  G  G+GKTT ++L+ RF       V               R   L    D+ 
Sbjct: 380 KGKMVAVVGPTGSGKTTIMNLINRFYDVNGGSVAF--------DGRDIREYDLDSLRDKV 431

Query: 63  G-AEAEAIVFA---------------------AARLDHVENVIRPALMEGK 91
           G    E+++F+                     AAR  H+ + I  +L EG 
Sbjct: 432 GIVLQESVLFSGTIADNIRFGDESISQEMVETAARATHIHDFIM-SLPEGY 481


>gi|259415777|ref|ZP_05739697.1| guanylate kinase [Silicibacter sp. TrichCH4B]
 gi|259347216|gb|EEW58993.1| guanylate kinase [Silicibacter sp. TrichCH4B]
          Length = 147

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I      GAGK+T    L+ +    ++ V   TR+P          H +      
Sbjct: 8   RRGLLIILSSPSGAGKSTLAKRLRAWDSDISFSVSATTRQPRPGEVDGQDYHFVSVDSFK 67

Query: 61  EFGAEAEAIVFAAARLDHV--------ENVIRPALMEGKILLCD 96
              A+ E +  A     HV        +  ++ A+ EG+ +L D
Sbjct: 68  HDVADGEMLEHA-----HVFGNFYGSPKGPVQKAINEGRDVLFD 106


>gi|237738819|ref|ZP_04569300.1| guanylate kinase [Fusobacterium sp. 2_1_31]
 gi|229423922|gb|EEO38969.1| guanylate kinase [Fusobacterium sp. 2_1_31]
          Length = 185

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|229073133|ref|ZP_04206302.1| Phosphoribulokinase/uridine kinase [Bacillus cereus F65185]
 gi|228709985|gb|EEL61990.1| Phosphoribulokinase/uridine kinase [Bacillus cereus F65185]
          Length = 219

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 7   ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   GI G   AGKTT  + L   L +   +   T +P    +      V+     +E  
Sbjct: 20  IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT-DPYIVSSDIRKHAVIHYTYQNENH 77

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                    AA            +  G     D +   ++ Y   +  S    +  ++ +
Sbjct: 78  RYKMTACHPAAHYLAALERDIQMVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVEGM 132

Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           S   + P   D  I      +  L R  +R      A + Y  +     HE+RR  +   
Sbjct: 133 SAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGADISYLRQS----HEERRIQYEVF 188

Query: 181 ARNQPDRCHIV 191
             +   R  I+
Sbjct: 189 MHSYSQRFDII 199


>gi|291287578|ref|YP_003504394.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Denitrovibrio acetiphilus DSM 12809]
 gi|290884738|gb|ADD68438.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Denitrovibrio acetiphilus DSM 12809]
          Length = 166

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
           +SF G  G GKTT I  +   L  + Y V   +
Sbjct: 4  LVSFVGTSGCGKTTLIEKVITELVNRGYKVSTVK 37


>gi|150021497|ref|YP_001306851.1| cytidylate kinase [Thermosipho melanesiensis BI429]
 gi|166199010|sp|A6LNG5|KCY_THEM4 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|149794018|gb|ABR31466.1| cytidylate kinase [Thermosipho melanesiensis BI429]
          Length = 217

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  G+GKTT   LL   L               T A      + LS    E   E 
Sbjct: 5   IAIDGPAGSGKTTVAKLLADAL---GI------FYLDTGAMYRIVGLYLSENNVESDEEI 55

Query: 67  EAIV------FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLD 118
           E  +      F+          I   +   +I +   +          R+    +   + 
Sbjct: 56  ERKLKELKITFSNGNFFLNGRKIGNEIRTPEIGI---YASKYAKRLPVRNYLTKIQREIA 112

Query: 119 SLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
             Q I V+    D  T++L    ++ +  V ++ +  +    +  E+   +  E+     
Sbjct: 113 KNQSIVVEGR--DIGTVVL-PDAEVKIFLVASQEARAKRRYKELMEKGVEVTFEEVLSEI 169

Query: 178 LDIARNQPDR----------CHIVDSA-HSFQSVATNILNIVWELVQ 213
           +   +   +R            ++D+   S + V   IL +V E  +
Sbjct: 170 VLRDKQDSERDVAPLKKAKDAILIDTTNLSIEEVIERILKVVKEKCK 216


>gi|118468367|ref|YP_886770.1| signal recognition particle protein [Mycobacterium smegmatis str.
           MC2 155]
 gi|118169654|gb|ABK70550.1| signal recognition particle protein [Mycobacterium smegmatis str.
           MC2 155]
          Length = 522

 Score = 36.5 bits (84), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++L+ K +
Sbjct: 107 GLQGAGKTTLAGKLAKWLKDKGH 129


>gi|330718670|ref|ZP_08313270.1| UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase [Leuconostoc
           fallax KCTC 3537]
          Length = 414

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 3   SGLFISFEGIEGA-GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
            G  I   G+ G+ GKTT +SL++  LQ     V  T    GTP  E A  +   
Sbjct: 74  KGRLI---GVTGSNGKTTTVSLIRDMLQADGQSVV-TAGNIGTPVCEVAGQLRKD 124


>gi|329847629|ref|ZP_08262657.1| signal recognition particle-docking protein FtsY [Asticcacaulis
           biprosthecum C19]
 gi|328842692|gb|EGF92261.1| signal recognition particle-docking protein FtsY [Asticcacaulis
           biprosthecum C19]
          Length = 326

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 40/213 (18%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +I  F G+ G+GKTT +  +   L  K   V +    G T  A A   +        +  
Sbjct: 121 YIVLFVGVNGSGKTTTLGKIAASLTAKGAKVLIVA--GDTFRAAAVEQL------KVWSE 172

Query: 65  EAEAIVF----AAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            A+A        A       + +  A  EG  ++L D            R  ++   +D 
Sbjct: 173 RAKADFMGRKTGADAAGLAYDSVVKAKEEGYDVVLID---------TAGRLQNKQALMDE 223

Query: 120 LQEI--SVQEVMPDC---TII-LDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           L +I   ++ V PD    T++ LD  V    +  +++  R +      +   +       
Sbjct: 224 LLKIVRVIKRVDPDAPHETLLVLDATVGRNALSQEQIFGRQAFVSGLVMTKLDGTA---- 279

Query: 171 EKRRQIFLD-IARNQPDRCHIVDSAHSFQSVAT 202
              R   L  IA+       ++      + +  
Sbjct: 280 ---RGGILIPIAKASDAPIKLIGVGEDIEDLHA 309


>gi|307266009|ref|ZP_07547556.1| excinuclease ABC, A subunit [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918971|gb|EFN49198.1| excinuclease ABC, A subunit [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 927

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD 34
           G+FI   G+ G+GK+T I  +L + L +K Y 
Sbjct: 618 GVFICVTGVSGSGKSTLINEILYKALAQKIYK 649


>gi|300741688|ref|ZP_07071709.1| signal recognition particle protein [Rothia dentocariosa M567]
 gi|300380873|gb|EFJ77435.1| signal recognition particle protein [Rothia dentocariosa M567]
          Length = 528

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L ++L+ + +   + 
Sbjct: 107 GLQGAGKTTLAGKLAKWLKGQGHTPILV 134


>gi|296170193|ref|ZP_06851787.1| sulfate adenylyltransferase subunit 1 [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895145|gb|EFG74862.1| sulfate adenylyltransferase subunit 1 [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 616

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK++   L+++ L  +    +                 +L       G  A+ 
Sbjct: 450 FTGLSGSGKSSVAMLVEQMLLERGVAAY-----------------VLDGDNLRHGLNADL 492

Query: 69  IVFAAARLDHVENVIRPA--LME-GKILL 94
               A R +++  +   A  L + G ++L
Sbjct: 493 GFSMADRAENLRRLAHVAALLADCGNVVL 521


>gi|282853476|ref|ZP_06262813.1| ABC transporter, ATP-binding protein [Propionibacterium acnes J139]
 gi|282582929|gb|EFB88309.1| ABC transporter, ATP-binding protein [Propionibacterium acnes J139]
          Length = 338

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 26/212 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           +N G  ++F G  GAGK+T + +L    +        +  +P           V  + G+
Sbjct: 56  INRGEVVAFLGPNGAGKSTTVDMLLGMTRPDSGKVTVLGSDPRTAARTGCISAVFQTGGL 115

Query: 60  DEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 AE +   AAA      + ++P        L +R+  + +A       S      
Sbjct: 116 LPDFTVAETMKAIAAAHGQ--RSRVKP--------LTERWELAPFAGIKVGKCSGGGQRQ 165

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLK-RVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            L+        PD  +ILD     GL    + R+        D         H      +
Sbjct: 166 RLRFALAMLPNPD-VLILD-EPTTGLDVEARRRFWQVMGEEADAGRTVIFATH------Y 217

Query: 178 LDIARNQPDRCHIVD-----SAHSFQSVATNI 204
           ++ A +   R  +V      +      V  ++
Sbjct: 218 IEEADSFARRVVLVSGGQLVADGPINEVRASV 249


>gi|257469950|ref|ZP_05634042.1| shikimate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|317064179|ref|ZP_07928664.1| shikimate kinase [Fusobacterium ulcerans ATCC 49185]
 gi|313689855|gb|EFS26690.1| shikimate kinase [Fusobacterium ulcerans ATCC 49185]
          Length = 172

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 35/177 (19%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK+T   +L ++L  K  D                  ++ +          E    A 
Sbjct: 12  GSGKSTIGRVLAKYLDMKFID---------------IDKMISAREKKTIPEIFEEKGEAY 56

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
            R    E V   +L    I++            G      +  + +L+E S         
Sbjct: 57  FRKLEREIVYEESLDNN-IVIAT----------GGGVIIDNENIKTLRETSF-------I 98

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           + LD  ++   +RV++          D FE+    +H K R+I   I+ +   R  +
Sbjct: 99  VYLDCTIECIYERVRHSKGRPLLNVEDMFEKIK-ELHSK-REILYRISADFSVRIDV 153


>gi|238063297|ref|ZP_04608006.1| signal recognition particle protein [Micromonospora sp. ATCC 39149]
 gi|237885108|gb|EEP73936.1| signal recognition particle protein [Micromonospora sp. ATCC 39149]
          Length = 527

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++G+GKTT    L R+L+ + +
Sbjct: 107 GLQGSGKTTLAGKLARWLKAQGH 129


>gi|237753290|ref|ZP_04583770.1| signal recognition particle protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375557|gb|EEO25648.1| signal recognition particle protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 296

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            I   G+ GAGKTT I+ L    +++   V +    G T  A A   + L   
Sbjct: 93  LIV--GVNGAGKTTTIAKLANAYKKQGKSVIL--GAGDTFRAAAIEQIKLWGD 141


>gi|256376896|ref|YP_003100556.1| ABC transporter [Actinosynnema mirum DSM 43827]
 gi|255921199|gb|ACU36710.1| ABC transporter related [Actinosynnema mirum DSM 43827]
          Length = 608

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 22/44 (50%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G  GAGKTT +SL+ RFL+     V +   P    A E  R  L
Sbjct: 375 GPSGAGKTTLLSLVLRFLEPSGGQVLLDGRPYREHAHEELRARL 418


>gi|222081783|ref|YP_002541148.1| ferrichrome-iron transporter [Agrobacterium radiobacter K84]
 gi|221726462|gb|ACM29551.1| ferrichrome-iron transporter [Agrobacterium radiobacter K84]
          Length = 274

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
          G+GK+T I LL R +Q     V     P G+  A A
Sbjct: 56 GSGKSTLIKLLARQIQPSGGQVLFDSAPAGSYDARA 91


>gi|164687172|ref|ZP_02211200.1| hypothetical protein CLOBAR_00813 [Clostridium bartlettii DSM
           16795]
 gi|164603596|gb|EDQ97061.1| hypothetical protein CLOBAR_00813 [Clostridium bartlettii DSM
           16795]
          Length = 251

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 23/120 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEAI 69
           G  G GK+T +  +   L+ +   +   +E         AR + L+S     +       
Sbjct: 34  GPNGCGKSTLLKSIANLLEHRGSVIIDGKEVSSMDKKSFARKIGLMSQITQIYFPYT--- 90

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                        I   +  G      R+  S  A          + L+S++++ + ++ 
Sbjct: 91  -------------IYDTVSLG------RYAYSKGALSKLSKEDDRIILESIEKVGLLDIK 131


>gi|126725903|ref|ZP_01741745.1| MalK protein [Rhodobacterales bacterium HTCC2150]
 gi|126705107|gb|EBA04198.1| MalK protein [Rhodobacterales bacterium HTCC2150]
          Length = 352

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F+ F G  G GK+T + L+ 
Sbjct: 26 INKGEFVVFVGPSGCGKSTLLRLIA 50


>gi|167036992|ref|YP_001664570.1| excinuclease ABC, A subunit [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|167039703|ref|YP_001662688.1| excinuclease ABC, A subunit [Thermoanaerobacter sp. X514]
 gi|300915048|ref|ZP_07132363.1| excinuclease ABC, A subunit [Thermoanaerobacter sp. X561]
 gi|307724971|ref|YP_003904722.1| excinuclease ABC subunit A [Thermoanaerobacter sp. X513]
 gi|320115410|ref|YP_004185569.1| excinuclease ABC subunit A [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166853943|gb|ABY92352.1| excinuclease ABC, A subunit [Thermoanaerobacter sp. X514]
 gi|166855826|gb|ABY94234.1| excinuclease ABC, A subunit [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|300888772|gb|EFK83919.1| excinuclease ABC, A subunit [Thermoanaerobacter sp. X561]
 gi|307582032|gb|ADN55431.1| excinuclease ABC, A subunit [Thermoanaerobacter sp. X513]
 gi|319928501|gb|ADV79186.1| excinuclease ABC, A subunit [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 927

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD 34
           G+FI   G+ G+GK+T I  +L + L +K Y 
Sbjct: 618 GVFICVTGVSGSGKSTLINEILYKALAQKIYK 649


>gi|158319489|ref|YP_001511996.1| LAO/AO transport system ATPase [Alkaliphilus oremlandii OhILAs]
 gi|158139688|gb|ABW18000.1| LAO/AO transport system ATPase [Alkaliphilus oremlandii OhILAs]
          Length = 313

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 6/56 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVD 60
           G  GAGK+T    L + L+++   +        +   GG+   +  R   L    D
Sbjct: 50  GPPGAGKSTLTDKLAKALRKEGKKIGIIAIDPTSPFTGGSILGDRVRMSDLYTDPD 105


>gi|330718975|ref|ZP_08313575.1| spermidine/putrescine import ATP-binding protein PotA
          [Leuconostoc fallax KCTC 3537]
          Length = 366

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          SG F +  G  G+GK+T + L+   L   N D+  
Sbjct: 32 SGKFYTLLGPSGSGKSTILKLISGQLMADNGDIIF 66


>gi|326389760|ref|ZP_08211325.1| excinuclease ABC, A subunit [Thermoanaerobacter ethanolicus JW 200]
 gi|325994242|gb|EGD52669.1| excinuclease ABC, A subunit [Thermoanaerobacter ethanolicus JW 200]
          Length = 927

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD 34
           G+FI   G+ G+GK+T I  +L + L +K Y 
Sbjct: 618 GVFICVTGVSGSGKSTLINEILYKALAQKIYK 649


>gi|325193831|emb|CCA28030.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 808

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 12/72 (16%)

Query: 6   FISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI   G   G GK+T  SLL   L+        T  P  +      RHVL S    E   
Sbjct: 153 FIVLLGGTSGTGKSTLASLLAARLR------LTTVLPTDS-----IRHVLRSVTCKEQNP 201

Query: 65  EAEAIVFAAARL 76
            A    + A   
Sbjct: 202 CAFVSTYQAGDA 213


>gi|320161007|ref|YP_004174231.1| signal recognition particle protein [Anaerolinea thermophila UNI-1]
 gi|319994860|dbj|BAJ63631.1| signal recognition particle protein [Anaerolinea thermophila UNI-1]
          Length = 440

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++G+GKTT  + L R L+ +   V + 
Sbjct: 106 GLQGSGKTTAAAKLARLLRSQGERVLLV 133


>gi|316972676|gb|EFV56341.1| signal recognition particle receptor subunit alpha [Trichinella
           spiralis]
          Length = 665

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I F G+ G GK+T+++ +  +L    + V +
Sbjct: 455 IVFCGVNGVGKSTNLAKVAFWLNENGFRVLI 485


>gi|302769091|ref|XP_002967965.1| hypothetical protein SELMODRAFT_169443 [Selaginella moellendorffii]
 gi|300164703|gb|EFJ31312.1| hypothetical protein SELMODRAFT_169443 [Selaginella moellendorffii]
          Length = 575

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 75/240 (31%), Gaps = 49/240 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
             G   +GK T   ++K      +    D+        T   + A+  +      +   +
Sbjct: 78  ISGAPASGKGTQCEMIKDKYNLVHISAGDLLRAEVAADTDYGKRAKEFM---NQGKLVPD 134

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              +     RL   +      L++G                  R  SQ   L++L+    
Sbjct: 135 DVVVSMVKQRLQLPDVCEAGWLLDGY----------------PRSLSQAQALEALK---- 174

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDYFERKDVMIHEKRRQI------ 176
             + P   I+L++P D+ ++RV  R     +     L YF  +D  +  +  Q       
Sbjct: 175 --IRPQLFILLEVPEDVLIERVVGRRLDPVTGKIYHLKYFPPEDPEVAARLIQRSDDTEK 232

Query: 177 -FLDIARNQPDR-----------CHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
             ++  R   +               VD       V  +I + + + ++        K+D
Sbjct: 233 KAMERLRTYHENLASVLSVYESCIKTVDGNRPKSEVFGDISSFLDDHIKAATKVSKPKQD 292


>gi|289618853|emb|CBI54678.1| unnamed protein product [Sordaria macrospora]
          Length = 246

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          L I+  GI G+GKTT   +L + L 
Sbjct: 25 LLIAIAGIPGSGKTTLAEILAKRLN 49


>gi|269959429|ref|ZP_06173812.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835866|gb|EEZ89942.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 184

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 24/117 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDE 61
           I   G  GAGKTT ++ L               E G    +E +R ++     L  GV  
Sbjct: 4   IVITGGPGAGKTTLLNALG--------------ELGYATFSEGSRTLIEQQSQLDNGVLP 49

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFL 117
           +    E   FA   L+ +    + AL  G +   DR +    AY Q      +  FL
Sbjct: 50  WTNLPE---FANLCLELMGQQKQEALSHG-VAFVDRAIPDIVAYLQVGGCPVEQAFL 102


>gi|226356876|ref|YP_002786616.1| adenylate kinase [Deinococcus deserti VCD115]
 gi|259493995|sp|C1CXE5|KAD_DEIDV RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|226318866|gb|ACO46862.1| putative adenylate kinase [Deinococcus deserti VCD115]
          Length = 197

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 64/222 (28%), Gaps = 58/222 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + F G  GAGK T    L +            +        +  R               
Sbjct: 9   VIFLGPPGAGKGTQAERLAQE-----------QSLTKISTGDILRD-------------- 43

Query: 67  EAIVFAAARLDHVENVIRPALMEGKIL--------LCD--------RFLDSSYAYQGERD 110
                  AR   +   ++P L  G ++        + D        R +   +   G + 
Sbjct: 44  -----HVARGTELGQQVKPILDAGHLVPDEILIALIRDKLAGMRPVRVIFDGFPRTGAQA 98

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            +    L+ L              +L++P  + + R+  R +  ++         +    
Sbjct: 99  EALDALLEDLGAPVTAVP------LLEVPDQVLIDRIVERGNQAQARGEAVRSDDNEETA 152

Query: 171 EKRRQIFLD----IARNQPDR--CHIVDSAHSFQSVATNILN 206
            +R+Q++ +    +      R   + V+   S   V   IL 
Sbjct: 153 RRRQQVYREQTQPLIDYYAGRGQLYTVNGVGSLDEVYDRILK 194


>gi|226305929|ref|YP_002765889.1| signal recognition particle protein [Rhodococcus erythropolis PR4]
 gi|229491376|ref|ZP_04385200.1| signal recognition particle protein [Rhodococcus erythropolis
           SK121]
 gi|226185046|dbj|BAH33150.1| signal recognition particle protein [Rhodococcus erythropolis PR4]
 gi|229321661|gb|EEN87458.1| signal recognition particle protein [Rhodococcus erythropolis
           SK121]
          Length = 525

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 53/160 (33%), Gaps = 22/160 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60
           G++G+GKTT    L ++L+ + +   +       P A     ++             G  
Sbjct: 107 GLQGSGKTTLAGKLAKWLKDQGHTPLLVACDLQRPGAVTQLQIVGERAGAAVFAPHPGTS 166

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             G E    V AA  ++     +  A  +   +++ D            R       +  
Sbjct: 167 IGGGENALGVSAADPVEVARAGVEEARNKHYDVVIVD---------TAGRLGIDSELMAQ 217

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
              I    V PD TI + L   IG   V    + RE   +
Sbjct: 218 AAGI-RDAVNPDETIFV-LDAMIGQDAVSTADAFREGVGI 255


>gi|254507275|ref|ZP_05119411.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
 gi|219549735|gb|EED26724.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
          Length = 178

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 18/114 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGA 64
           I   G  GAGKTT ++ L               E G    AE +R ++   S   +    
Sbjct: 4   IVITGGPGAGKTTLLNALG--------------ELGYATFAEGSRTLIEQQSQLDEGILP 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFL 117
                 FA   L+ + N  R A    K+   DR +    AY Q    + +  F+
Sbjct: 50  WTNLPEFANLCLELMGNQKREA-ENHKVAFVDRAIPDIVAYLQVGGCNVEPRFI 102


>gi|170026534|gb|ACB05941.1| arsenite-activated ATPase [Pseudomonas sp. TS44]
          Length = 585

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 13/79 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L R+   VH+T        AE     L +  V 
Sbjct: 332 MGKG---------GVGKTTMAAAVAVDLARRGLPVHLTTSDPAAHLAETLEGALDNLTVS 382

Query: 61  EFGAEAEAIVFAAARLDHV 79
               +AE   +      HV
Sbjct: 383 RIDPQAETERY----RQHV 397


>gi|145239003|ref|XP_001392148.1| guanylate kinase [Aspergillus niger CBS 513.88]
 gi|134076651|emb|CAK45182.1| unnamed protein product [Aspergillus niger]
          Length = 200

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 31/172 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  G GK+T +  L   +  +  + + H TR P   P  +  R    +   D    
Sbjct: 12  VVVSGPSGTGKSTLLKRLFSEIPDRFGFSISHTTRAP--RPGEQDGREYYFTTKEDFLDL 69

Query: 65  EA-----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +     E   F           ++    +G+I + D                +   +  
Sbjct: 70  VSKNGFIEHAQFGGNHYGTSVQAVKNIAEQGRICILD---------------IEMEGVKQ 114

Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
           ++   +         +   P   +   KR++ R +  E +      +    +
Sbjct: 115 VKRTDLNAR-----FLFLAPPSVEELEKRLRGRGTETEESLTKRLTQAKNEL 161


>gi|122879200|ref|YP_201258.6| flagellar biosynthesis regulator FlhF [Xanthomonas oryzae pv.
           oryzae KACC10331]
          Length = 552

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 17/121 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G  I+  G  GAGKTT I+ L +    ++   DV +             R  L S G  
Sbjct: 342 RGGVIALVGPTGAGKTTTIAKLAQRFAAQHTPRDVALVTTDTQRVGG---REQLHSYGRQ 398

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  E     A   + + ++    L + K++L D       A  G+RD +    L+ L
Sbjct: 399 LGVAVHE-----ADSAESLLDLFE-RLRDYKLVLID------TAGMGQRDRALAAQLNWL 446

Query: 121 Q 121
           +
Sbjct: 447 R 447


>gi|187926221|ref|YP_001892566.1| ABC transporter related [Ralstonia pickettii 12J]
 gi|241665709|ref|YP_002984068.1| ABC transporter [Ralstonia pickettii 12D]
 gi|187727975|gb|ACD29139.1| ABC transporter related [Ralstonia pickettii 12J]
 gi|240867736|gb|ACS65396.1| ABC transporter related [Ralstonia pickettii 12D]
          Length = 273

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G F++  G  G GK+T ++ +   L+     V V  EP
Sbjct: 44 GEFVAVVGPTGCGKSTLLNAVTGLLKPAGGTVSVFGEP 81


>gi|321309574|ref|YP_004191903.1| cytidylate kinase [Mycoplasma haemofelis str. Langford 1]
 gi|319801418|emb|CBY92064.1| cytidylate kinase [Mycoplasma haemofelis str. Langford 1]
          Length = 226

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 12/60 (20%)

Query: 5  LF--ISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAARHV 53
          +F  I+ +G  G GK+T  +LL + L           +    ++ R P      E  R +
Sbjct: 1  MFFQIAIDGPSGVGKSTVANLLAQNLSFLHVNTGLIFRGVAWYLLRNP-KREIGEVLREI 59


>gi|298675107|ref|YP_003726857.1| ABC transporter-like protein [Methanohalobium evestigatum Z-7303]
 gi|298288095|gb|ADI74061.1| ABC transporter related protein [Methanohalobium evestigatum
           Z-7303]
          Length = 245

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 65/198 (32%), Gaps = 26/198 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLLS 56
           G   +F G  GAGKTT + +L   L       +   YDV   +           +   L 
Sbjct: 29  GEIFAFLGPNGAGKTTSLKILTTILHPTSGNIRVNGYDVLHKKNDVRKSIGVIFQDNSLD 88

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--SSYAYQGERDSSQH 114
             +  +       V      + +   +   L  G + L DR  D   +++   +R     
Sbjct: 89  DKLTAYENMEYHAVLYKVPKEEIRERVDKLL--GNVELLDRKNDLIKTFSGGMKRRI--- 143

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                  EI+   +     + LD    +GL     R  L E    D  E  ++ +     
Sbjct: 144 -------EIARGLIHTPKVLFLD-EPTLGLD-AHTRAFLWEYIR-DLKENSNLTVFLTTH 193

Query: 175 QIFLDIARNQPDRCHIVD 192
              LD A    DR  I+D
Sbjct: 194 N--LDEAEKIADRIAIID 209


>gi|281490989|ref|YP_003352969.1| deoxyguanosine kinase [Lactococcus lactis subsp. lactis KF147]
 gi|281374747|gb|ADA64267.1| Deoxyguanosine kinase [Lactococcus lactis subsp. lactis KF147]
 gi|326406023|gb|ADZ63094.1| deoxyguanosine kinase [Lactococcus lactis subsp. lactis CV56]
          Length = 217

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 28/160 (17%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGK++   +L   L+ +                                 +  A +   
Sbjct: 11  GAGKSSLTEMLAEELKTQ----AFYESVDDNKVLPLFYE----------NPQKYAFLLQI 56

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSLQEISVQE 127
             L+   + I+ AL +   +L DR  + DS      A  G  D ++    D L    ++E
Sbjct: 57  YFLNKRFDSIKRALSDNNNVL-DRSIYEDSLLFHLNADLGRADETEVEVYDDLLNNMLEE 115

Query: 128 V-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +        PD  I + +  D  L+R++ R    E    D
Sbjct: 116 IDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYD 155


>gi|262273591|ref|ZP_06051405.1| signal recognition particle receptor protein FtsY [Grimontia
           hollisae CIP 101886]
 gi|262222569|gb|EEY73880.1| signal recognition particle receptor protein FtsY [Grimontia
           hollisae CIP 101886]
          Length = 529

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q++   V +    G T  A A   + +    +     A+   
Sbjct: 332 GVNGVGKTTTIGKLAKQFQQQGKSVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 387

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A      +++ D
Sbjct: 388 TGADSASVIYDAIEAAKARNVDVVIAD 414


>gi|256750637|ref|ZP_05491523.1| excinuclease ABC, A subunit [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750477|gb|EEU63495.1| excinuclease ABC, A subunit [Thermoanaerobacter ethanolicus CCSD1]
          Length = 927

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD 34
           G+FI   G+ G+GK+T I  +L + L +K Y 
Sbjct: 618 GVFICVTGVSGSGKSTLINEILYKALAQKIYK 649


>gi|255262259|ref|ZP_05341601.1| polyphosphate kinase 2 [Thalassiobium sp. R2A62]
 gi|255104594|gb|EET47268.1| polyphosphate kinase 2 [Thalassiobium sp. R2A62]
          Length = 292

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I   +  L  ++  V    +P      E          + E  AE 
Sbjct: 76  IVFEGRDAAGKGGTIKRFRENLSARSARVVALSKPTDRERGEW----YFQRYIKELPAEG 131

Query: 67  EAIVFAAARLDHVENVIRP 85
           E   F   R  +   V+  
Sbjct: 132 EITFF--DRSWYNRGVVEH 148


>gi|226312363|ref|YP_002772257.1| hypothetical protein BBR47_27760 [Brevibacillus brevis NBRC 100599]
 gi|226095311|dbj|BAH43753.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 320

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 44/173 (25%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   GI G+GK+      +   +++   +  T E          R  L   G +
Sbjct: 1   MKK-KLIVLSGIAGSGKS---KWAQEIAKKERAIIVSTDE---------IRQNLF--GDE 45

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               ++  + F       V + I   L  G+ ++ D             +  +   +  L
Sbjct: 46  RKQKKSAQVFFE------VYSKIATELANGRNVILD-----------ATNIDREKRMKVL 88

Query: 121 QEISVQEVMPDCT---IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            +       PD       +D+P  + L+R ++R    +   L    +     H
Sbjct: 89  AKF------PDVQKECYYVDVPYSVCLERNKSRKRTVDEYILAKMRK---NFH 132


>gi|224419030|ref|ZP_03657036.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Helicobacter canadensis MIT 98-5491]
 gi|253827973|ref|ZP_04870858.1| adenylylsulfate kinase [Helicobacter canadensis MIT 98-5491]
 gi|253511379|gb|EES90038.1| adenylylsulfate kinase [Helicobacter canadensis MIT 98-5491]
          Length = 197

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  + L++ L    Y  +                 LL       G   +   
Sbjct: 32  GLSGSGKSTLANALEQRLFTMGYHTY-----------------LLDGDNVRHGLNKDLGF 74

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
              +R++++     V +  +  G I+LC     +  +   +        LD  + I    
Sbjct: 75  DENSRVENIRRIGKVCKLFVDSGLIVLC-----AFISPFCKERQIIRELLDKGEYIE--- 126

Query: 128 VMPDCTIILDLPVDIGLKR 146
                 I +D P+++  KR
Sbjct: 127 ------IFVDTPIEVCKKR 139


>gi|149920265|ref|ZP_01908736.1| cytidylate kinase [Plesiocystis pacifica SIR-1]
 gi|149818852|gb|EDM78292.1| cytidylate kinase [Plesiocystis pacifica SIR-1]
          Length = 236

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL 28
          +G  I+ +G  GAGKTT    + R L
Sbjct: 2  AGPLIAIDGPAGAGKTTVARAVAREL 27


>gi|50120471|ref|YP_049638.1| type I secretion ATP-binding protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610997|emb|CAG74442.1| Type I secretion ATP-binding protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 619

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 10/41 (24%)

Query: 7   ISFE----------GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+FE          G  G+GK+T   LL   +      V +
Sbjct: 353 ITFELAPGDVLGILGPSGSGKSTLARLLVAAMPALGGKVRL 393


>gi|17232279|ref|NP_488827.1| hypothetical protein alr4787 [Nostoc sp. PCC 7120]
 gi|17133924|dbj|BAB76486.1| alr4787 [Nostoc sp. PCC 7120]
          Length = 510

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 25/165 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60
             G  I   G+ G+GK+T    L R L          R+  GG    E     L +    
Sbjct: 340 KQGKLILMSGLSGSGKSTTAKYLARQLGAIQIRSDAVRKHLGGISLWERGGDDLYTP--- 396

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           E   +  A +           +I     +G  ++ D   D        + + +   +   
Sbjct: 397 EMTQKTYARLLNL-------GIILA--NQGYTVILDAKYD--------KQNLRAEAIAQA 439

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
           ++  +   +  CT     P+++  +R+  R      A +D    +
Sbjct: 440 EKHHLPLQIIHCT----APIEVIQERLIKRTGDIADATVDLLSSQ 480


>gi|322517149|ref|ZP_08070033.1| dephospho-CoA kinase [Streptococcus vestibularis ATCC 49124]
 gi|322124299|gb|EFX95810.1| dephospho-CoA kinase [Streptococcus vestibularis ATCC 49124]
          Length = 204

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 69/229 (30%), Gaps = 58/229 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT---PAAEAARHVLLSCGVDE 61
           + I   G   +GK+T + ++K       Y V    +             R +L   G   
Sbjct: 8   MIIGLTGGIASGKSTVVEMIKEV----GYKVIDADQLVHDMQAKGGRLYRALLDWLGEGI 63

Query: 62  FGAEAEA-------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                E        ++F++  + H    I     +GKI+              E  + + 
Sbjct: 64  LLPNGELNRPKLGKLIFSSEEMRHQSAEI-----QGKII-------------REELAVKR 105

Query: 115 LFLDSLQEISVQEVMPDCTI------ILD------LPVDIGLKRVQNRYSLRESACLDYF 162
             L   +++   ++ P   I        D      +  ++  +R+  R  L         
Sbjct: 106 DCLAKEEDVFFMDI-P-LLIENDYQDWFDQIWLVAVSPEVQRQRLMKRNHLSAEEAGMRI 163

Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             +            + +A   P    ++D+  S   +   + + + +L
Sbjct: 164 ASQ------------MPLAEKLPYASLVIDNNGSIDDLKKKVKSAIKDL 200


>gi|317179962|dbj|BAJ57748.1| shikimate kinase [Helicobacter pylori F32]
          Length = 162

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVRGIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|307150021|ref|YP_003885405.1| hypothetical protein Cyan7822_0078 [Cyanothece sp. PCC 7822]
 gi|306980249|gb|ADN12130.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
          Length = 504

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 47/173 (27%), Gaps = 33/173 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
            SG  I   G+ G+GK+T    L        L+      H+   P               
Sbjct: 340 KSGKLILMSGLSGSGKSTVAQKLAADINAIHLRSDAVRKHLAAIPLSEKGGPEI------ 393

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
               E   +    +        +E  I   +  G  ++ D                +  +
Sbjct: 394 -YTPEMSQKTYHRL--------LELGIM-LVKAGYPVILD------------AKYDRREW 431

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
                  +  E +P   +    P++I  +R+Q R      A  D    +    
Sbjct: 432 RAGAIAFAESENIPLEILYCTAPLEILSERLQTRSGDISDATPDLLASQQTHF 484


>gi|311113791|ref|YP_003985013.1| signal recognition particle protein [Rothia dentocariosa ATCC
           17931]
 gi|310945285|gb|ADP41579.1| signal recognition particle protein [Rothia dentocariosa ATCC
           17931]
          Length = 528

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L ++L+ + +   + 
Sbjct: 107 GLQGAGKTTLAGKLAKWLKGQGHTPILV 134


>gi|239995882|ref|ZP_04716406.1| UDP-galactose-lipid carrier transferase MED92 [Alteromonas
          macleodii ATCC 27126]
          Length = 277

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 15/36 (41%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           I FEG + +GK   I  +   L  +   V    +P
Sbjct: 57 LIVFEGWDASGKGGAIRRITEKLDPRGVSVFPVAKP 92


>gi|238749850|ref|ZP_04611354.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          rohdei ATCC 43380]
 gi|238711779|gb|EEQ03993.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          rohdei ATCC 43380]
          Length = 583

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT I +L   L+
Sbjct: 42 GPDGAGKTTLIRMLAGLLK 60


>gi|227487953|ref|ZP_03918269.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227092044|gb|EEI27356.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 580

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 15/90 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++G FI   G  GAGKTT++  L          V +T+ PG        R   +   ++ 
Sbjct: 280 HAGEFIVIIGPNGAGKTTYMHTLD--------GVLLTQNPG------LPRTCTVKKALEM 325

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK 91
              +A+A + AA   D  +  + PAL  G+
Sbjct: 326 VTKDADAWISAAGLADLSDVPV-PALSGGQ 354


>gi|71083784|ref|YP_266504.1| adenylate kinase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91763180|ref|ZP_01265144.1| adenylate kinase [Candidatus Pelagibacter ubique HTCC1002]
 gi|123646425|sp|Q4FLN8|KAD_PELUB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|71062897|gb|AAZ21900.1| adenylate kinase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717593|gb|EAS84244.1| adenylate kinase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 213

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 78/239 (32%), Gaps = 57/239 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN    I F G  GAGK T    + +                        R  + S    
Sbjct: 1   MN---IILF-GPPGAGKGTQAQSIVKK-----------HNYFQLSTGNLLRDEVKSK--T 43

Query: 61  EFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           + G + E ++    F +   + V  ++R +L   K    DR +   Y    E+  +  + 
Sbjct: 44  DLGVDIEKLISNGKFVSD--EIVNTLLRQSLTNLKY--RDRIIFDGYPRNVEQAINLEVL 99

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIH---- 170
           L+   +          TI L++  DI  KR+  R +  +      +YF ++ + +H    
Sbjct: 100 LNEFNQTIGH------TIFLNVSRDIIEKRIMGRMTCEKCNMTLNEYFNKEQIELHPCGV 153

Query: 171 ----EK----------RRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVW 209
               ++          R   ++   +      ++      +D A     +   I  I+ 
Sbjct: 154 EHLKKRKDDNLEIVISRYDTYMSSTKPVLEFYSKNSNFTEIDGAGEIDQITNKINEILK 212


>gi|125152|sp|P00569|KAD1_RABIT RecName: Full=Adenylate kinase isoenzyme 1; Short=AK 1; AltName:
           Full=ATP-AMP transphosphorylase 1; AltName:
           Full=Myokinase
          Length = 194

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 69/228 (30%), Gaps = 56/228 (24%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +     I   G  G+GK T               +            +  R  + S    
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCE-----------KIVHKYGYTHLSTGDLLRAEVSSGS-- 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLF 116
                        AR   +  +    + +G+++    + D   D+  A   + D+S+   
Sbjct: 52  -------------ARGKKLSEI----MEKGQLVPLETVLDMLRDAMVA---KADTSKGFL 91

Query: 117 LD-------SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
           +D         +E   +   P   + +D   +   KR+  R     S  +D  E      
Sbjct: 92  IDGYPRQVQQGEEFERRIAQPTLLLYVDAGPETMQKRLLKRGET--SGRVDDNE----ET 145

Query: 170 HEKRRQIFLD-----IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
            +KR + +       IA  +       V++  S  +V + +   +  L
Sbjct: 146 IKKRLETYYKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQVCTHLDAL 193


>gi|332158693|ref|YP_004423972.1| adenylylsulfate kinase [Pyrococcus sp. NA2]
 gi|331034156|gb|AEC51968.1| adenylylsulfate kinase [Pyrococcus sp. NA2]
          Length = 178

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV 35
          G  GAGKTT    L + L+   Y V
Sbjct: 14 GPSGAGKTTLAVKLAKKLREMGYRV 38


>gi|328792138|ref|XP_001120209.2| PREDICTED: adenylate kinase isoenzyme 5-like [Apis mellifera]
          Length = 232

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 69/226 (30%), Gaps = 59/226 (26%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI   G  G+GK T  + +     +  ++  ++         +  R+      V +   +
Sbjct: 35  FII--GGPGSGKRTITTHVAE---KYGFERIIS--------TDIIRN-----EVSKRSDK 76

Query: 66  AEAIVFAAARLDHVENVIRPAL-----------MEGKILLCDRFLDSSYAYQGERDSSQH 114
           A A+    +R   V   +   L            +G       F  S +    ++     
Sbjct: 77  AYALARYLSRGQLVPEDVLVELIAIRMLENIHKKKG-------FFISGFPRDKKQGKVFD 129

Query: 115 LFLDSLQEISVQEVMPDCTIILDL------PVDIGLKRVQNRYSLRESACLDYFERKDVM 168
             +            PD  I+L +        ++       + + R S   DY + +   
Sbjct: 130 KEIR----------KPDLVILLHVRNSVMTDREMA---KSVKATERVSVTFDYIKNRIKD 176

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            H +       I R+      I+D+      V  N   ++   ++K
Sbjct: 177 YHRRN----KSILRHYRKVLVIIDAEPEIMVVVENACAVIDNFLKK 218


>gi|327400904|ref|YP_004341743.1| adenylyl-sulfate kinase [Archaeoglobus veneficus SNP6]
 gi|327316412|gb|AEA47028.1| Adenylyl-sulfate kinase [Archaeoglobus veneficus SNP6]
          Length = 172

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV 35
          G  GAGKTT  + L   L     +V
Sbjct: 9  GPSGAGKTTLANALYEKLSEMGLNV 33


>gi|319796042|ref|YP_004157682.1| ABC transporter [Variovorax paradoxus EPS]
 gi|315598505|gb|ADU39571.1| ABC transporter related protein [Variovorax paradoxus EPS]
          Length = 276

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G F++  G  G GK+T + ++   L+  +  + V R+P
Sbjct: 46 GEFVTLLGPSGCGKSTLLKMVAGMLEPSDGRLLVWRKP 83


>gi|260495232|ref|ZP_05815360.1| ABC transporter [Fusobacterium sp. 3_1_33]
 gi|260197289|gb|EEW94808.1| ABC transporter [Fusobacterium sp. 3_1_33]
          Length = 414

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 8/84 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G+ G+GKTT +  +K F   KN +             ++  ++ +     E    
Sbjct: 30  LIVLAGVNGSGKTTILEAIKDFFDNKNVN--------YDELEKSNINLDIFFEDFEKNKI 81

Query: 66  AEAIVFAAARLDHVENVIRPALME 89
            EA      R +H       AL  
Sbjct: 82  EEAQKNCKDRYEHKLKEFFYALKS 105


>gi|226229102|ref|YP_002763208.1| putative bacteriocin-processing peptidase [Gemmatimonas aurantiaca
           T-27]
 gi|226092293|dbj|BAH40738.1| putative bacteriocin-processing peptidase [Gemmatimonas aurantiaca
           T-27]
          Length = 707

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
             G  ++ EG  G GK++ ++++   L+
Sbjct: 511 RRGELVTLEGPSGCGKSSLVAVIAGHLR 538


>gi|217964145|ref|YP_002349823.1| deoxyguanosIne kinase (dguo kinase) (dgk)(deoxynucleoside kinase
           complex i f-component) [Listeria monocytogenes HCC23]
 gi|217333415|gb|ACK39209.1| deoxyguanosIne kinase (dguo kinase) (dgk)(deoxynucleoside kinase
           complex i f-component) [Listeria monocytogenes HCC23]
 gi|307571288|emb|CAR84467.1| deoxynucleoside kinase [Listeria monocytogenes L99]
 gi|313608344|gb|EFR84317.1| deoxyguanosine kinase [Listeria monocytogenes FSL F2-208]
          Length = 214

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 46/232 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62
             I   G+ GAGK+++  L+   L                   +A    +    + E   
Sbjct: 7   KVIVLAGMIGAGKSSYTELIANKL-----------------GTKAFYESIKDNRILEMFY 49

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-----SQH 114
              +  A       L+     I+ AL +   +L DR  + D+ +      +         
Sbjct: 50  DDPKRWAFALQIYFLNTRFRSIKAALTDQNNVL-DRSIYEDALFTQINFEEGNISEPEMD 108

Query: 115 LFLDSL----QEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-----ACLDYFER 164
            +LD L    +E++ + +  PD  I L   +D  L R+  R    E        LDY++ 
Sbjct: 109 TYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNPGLLDYYKH 168

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHI--VDSAHSFQSVATNILNIVWELVQK 214
               +H +    F    +++    +I  +D        A  ++ ++ E +++
Sbjct: 169 ----LHSRYDSWFESYDKSETLVINIDEIDINQPND--ADYVMQLIHEKLKR 214


>gi|163791470|ref|ZP_02185878.1| hypothetical protein CAT7_00480 [Carnobacterium sp. AT7]
 gi|159873283|gb|EDP67379.1| hypothetical protein CAT7_00480 [Carnobacterium sp. AT7]
          Length = 222

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 40/225 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ GAGK+T+   +   L     +                   +L    +     A
Sbjct: 9   IVLAGMIGAGKSTYTKFISEAL---GSEAFYESVDDNR---------ILEKFYENPERWA 56

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-----SQHLFL 117
            ++   F   R   ++   +         + DR  + D+ +      +          +L
Sbjct: 57  FSLQIYFLNTRFRSIKEAFKHENN-----VLDRSIYEDALFTRINYEEGNMSDAEMDTYL 111

Query: 118 DSLQEI-----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHE 171
           D L  +     ++ +  PD  I L   +D  L R++ R    E     D      +  + 
Sbjct: 112 DLLDNMMEELDNMPKKSPDLLIYLRGSLDTVLSRIEKRGRTFEQVEGNDGL----LDYYT 167

Query: 172 KRRQIFLD-IARNQPDRCHIVDSAH-SFQSV--ATNILNIVWELV 212
                + D  +        ++D      + V  A  +L++V E +
Sbjct: 168 HLHSQYDDWFSDYDKSATLVIDINQYDLEKVTDAEKVLSMVNEKL 212


>gi|158335319|ref|YP_001516491.1| excinuclease ABC subunit A [Acaryochloris marina MBIC11017]
 gi|158305560|gb|ABW27177.1| excinuclease ABC, A subunit [Acaryochloris marina MBIC11017]
          Length = 1006

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPAAEAA-RHVLLSCGVD 60
           G  +   G+ G+GK+T +  LL   LQ    + V    E       ++  + +++     
Sbjct: 689 GKLVCITGVSGSGKSTLMNELLYPALQHHLGFKVPFPNELDRVAGLKSLDKAIVIDQSPI 748

Query: 61  EFGAEA 66
                +
Sbjct: 749 GRTPRS 754


>gi|157737464|ref|YP_001490147.1| molybdopterin-guanine dinucleotide biosynthesis protein
          [Arcobacter butzleri RM4018]
 gi|157699318|gb|ABV67478.1| molybdopterin-guanine dinucleotide biosynthesis protein
          [Arcobacter butzleri RM4018]
          Length = 165

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          MN    +  F G   +GKTT I  +   LQ +++ V + +
Sbjct: 1  MNKKRLVVAFSGPSNSGKTTAIVKVASILQDQSFKVCIVK 40


>gi|158291421|ref|XP_312934.4| AGAP003226-PA [Anopheles gambiae str. PEST]
 gi|157017766|gb|EAA08391.4| AGAP003226-PA [Anopheles gambiae str. PEST]
          Length = 3914

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 25/117 (21%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
            G  G+GKTT + +L    ++ +       E    P     R   L+            + 
Sbjct: 1529 GPTGSGKTTVLHILANAFEKLH------AENAPGPLYRPVRIQTLNPKAISMDELYGFVN 1582

Query: 71   FAAA--RLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             A    R   +   IR A+       + ++CD                  +++++L 
Sbjct: 1583 LATMEWRDGLLGMAIRSAVIVTDEIHQWVVCD-------------GPVDAVWIENLN 1626


>gi|148253360|ref|YP_001237945.1| ABC transporter ATP-binding subunit [Bradyrhizobium sp. BTAi1]
 gi|146405533|gb|ABQ34039.1| ABC transporter, atp_binding subunit [Bradyrhizobium sp. BTAi1]
          Length = 364

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            G FISF G  G GKTT + ++  FL
Sbjct: 45 TKGEFISFLGPSGCGKTTTLQMIAGFL 71


>gi|125585296|gb|EAZ25960.1| hypothetical protein OsJ_09815 [Oryza sativa Japonica Group]
          Length = 228

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 36/149 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L    +              +  R         +
Sbjct: 49  QKGCVIWITGLSGSGKSTLACALNRELHCSGH-------LTYVLDGDNLR----HGLNRD 97

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
              +AE       R +++     V +     G I +      S  + Y+ +RD+ + L  
Sbjct: 98  LSFKAE------DRAENIRRVGEVAKLFADAGIICIA-----SLISPYRRDRDACRVLLP 146

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146
           +S      + +     + +DLP++I   R
Sbjct: 147 ES------RFIE----VFMDLPLEICEAR 165


>gi|18313913|ref|NP_560580.1| ATPase [Pyrobaculum aerophilum str. IM2]
 gi|18161482|gb|AAL64762.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 518

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 11/60 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ I+  G  GAGKTT    L  F   K   V     P         R ++LS  + +  
Sbjct: 258 GILIA--GAPGAGKTTFAQALAEFYLSKGKVVKTVESP---------RDMVLSPAITQLS 306


>gi|152975752|ref|YP_001375269.1| ABC transporter-related protein [Bacillus cereus subsp. cytotoxis
          NVH 391-98]
 gi|152024504|gb|ABS22274.1| ABC transporter-related protein [Bacillus cytotoxicus NVH 391-98]
          Length = 251

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          +N G F++  G  G GK+T + ++         +V + RE
Sbjct: 29 INKGDFVTIIGPSGCGKSTLLKIVAGLDNDFIGEVFIDRE 68


>gi|254230051|ref|ZP_04923450.1| adenylylsulfate kinase [Vibrio sp. Ex25]
 gi|262392478|ref|YP_003284332.1| adenylylsulfate kinase [Vibrio sp. Ex25]
 gi|151937439|gb|EDN56298.1| adenylylsulfate kinase [Vibrio sp. Ex25]
 gi|262336072|gb|ACY49867.1| adenylylsulfate kinase [Vibrio sp. Ex25]
          Length = 205

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|117925838|ref|YP_866455.1| adenylylsulfate kinase [Magnetococcus sp. MC-1]
 gi|117609594|gb|ABK45049.1| adenylylsulfate kinase [Magnetococcus sp. MC-1]
          Length = 388

 Score = 36.5 bits (84), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 32/147 (21%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GKTT   LL   L +                 +  R +       E     +       
Sbjct: 18  SGKTTVARLLDANLSQAGVQTIFL-------DGDQLRSIFDHRWGYERADRIDLARVYFR 70

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTI 134
              H+         +G  ++    + +   Y+  R   +    + L+            I
Sbjct: 71  LCSHLS-------SQGYTVI----IAAVAMYEEVRTWFKMHVNNPLE------------I 107

Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDY 161
            LD+P     +R +++ S       D+
Sbjct: 108 YLDVP--ESERRKRDKKSKHVYKKQDF 132


>gi|330470139|ref|YP_004407882.1| ABC transporter-like protein [Verrucosispora maris AB-18-032]
 gi|328813110|gb|AEB47282.1| ABC transporter-like protein [Verrucosispora maris AB-18-032]
          Length = 559

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 49/145 (33%), Gaps = 24/145 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---------GTPAAEAARHVLLSCGVDE 61
           G  GAGKTT + ++   L  +   V  T   G         G  +  A   + L+     
Sbjct: 37  GPNGAGKTTLLRMVAGDLPVRTGTVARTGGLGVMRQFIGMIGDESTLADLALSLAPPPLR 96

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                 A   AA R   +      A   GK  L   + D+  A+         +  D++ 
Sbjct: 97  EAGRRLAETEAAMRAAELRGKYSSA--AGKAQLA--YADALAAWGETGGYDAEVLFDTVA 152

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
                      TI+LDLP D   +R
Sbjct: 153 -----------TIVLDLPWDTARQR 166


>gi|317488193|ref|ZP_07946764.1| cytidylate kinase [Eggerthella sp. 1_3_56FAA]
 gi|316912698|gb|EFV34236.1| cytidylate kinase [Eggerthella sp. 1_3_56FAA]
          Length = 225

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  GAGK+T    + R L
Sbjct: 1  MIIAIDGPSGAGKSTVAKAVAREL 24


>gi|310766480|gb|ADP11430.1| Twitching motility protein [Erwinia sp. Ejp617]
          Length = 299

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G  G+GK+T ++ L   + ++     +T E        +A+ ++      +    
Sbjct: 90  LILITGATGSGKSTTLAALIDEINQRQRRHILTLEDPVEFLHHSAQSLIQQREKGQHFTR 149

Query: 66  AEAIVFAAARLD 77
            EA + AA R D
Sbjct: 150 FEAGLRAALRED 161


>gi|303238987|ref|ZP_07325517.1| ABC transporter related protein [Acetivibrio cellulolyticus CD2]
 gi|302593325|gb|EFL63043.1| ABC transporter related protein [Acetivibrio cellulolyticus CD2]
          Length = 232

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          +N G FI   G  G+GK+T I L    L
Sbjct: 27 INKGKFIGLLGPNGSGKSTFIKLCNNLL 54


>gi|298245528|ref|ZP_06969334.1| DNA replication factor Dna2 [Ktedonobacter racemifer DSM 44963]
 gi|297553009|gb|EFH86874.1| DNA replication factor Dna2 [Ktedonobacter racemifer DSM 44963]
          Length = 1067

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 16/83 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKT+ I+ + + L ++   V +          +A  ++LL    + F        
Sbjct: 629 GPPGTGKTSVIAEIVKRLTQQGQRVLLAAF-----TNQAVDNILLRLEREGFDTYL---- 679

Query: 71  FAAARLDH---VENVIRPALMEG 90
               RL H   V   +RP L++G
Sbjct: 680 ----RLGHERSVAEGVRPHLLKG 698


>gi|302868350|ref|YP_003836987.1| daunorubicin resistance ABC transporter ATPase subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|302571209|gb|ADL47411.1| daunorubicin resistance ABC transporter ATPase subunit
           [Micromonospora aurantiaca ATCC 27029]
          Length = 328

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 60/201 (29%), Gaps = 18/201 (8%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI- 69
           G  GAGK+T + LL   L        V      T AAE  R + LS              
Sbjct: 37  GPNGAGKSTAVRLLTTLLAPTGGRAEVAGFDVVTQAAEVRRVISLSGQHAAVDENLSGFE 96

Query: 70  -VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
            +    RL H+         +    L  RF     A  G R       +    +++   +
Sbjct: 97  NLEMLGRLLHLGARQSRQRADE---LLQRFDLVDAA--GRRAKEYSGGMRRRLDLAAALI 151

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
                + LD     GL     R        +       + +    +  +L+ A    D+ 
Sbjct: 152 RTPRVLFLD-EPTTGLD---TRSRTALWDTIGELVSGGMTLLLTTQ--YLEEADRLADQI 205

Query: 189 HIVD-----SAHSFQSVATNI 204
            ++D     +  +   +   +
Sbjct: 206 VVIDHGRVVAGGTPDELKRRV 226


>gi|260665117|ref|ZP_05865967.1| guanylate kinase [Lactobacillus jensenii SJ-7A-US]
 gi|313473018|ref|ZP_07813505.1| guanylate kinase [Lactobacillus jensenii 1153]
 gi|239528772|gb|EEQ67773.1| guanylate kinase [Lactobacillus jensenii 1153]
 gi|260561171|gb|EEX27145.1| guanylate kinase [Lactobacillus jensenii SJ-7A-US]
          Length = 194

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 22/165 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  GAGKTT  + L+   Q      H TR      + E+               
Sbjct: 12  KLIIIAGPSGAGKTTISNYLEEKYQIPRVLTHTTR---AIRSGESKDAYYFENEESFAKL 68

Query: 65  EA-EAIVFAAARLDHVENVIRPALMEGKIL--LCD-----RFLDSSYAYQGERDSSQHLF 116
              E++ + + +       +  A     I+  + D      +++   A Q      +   
Sbjct: 69  HLFESVKYGSYQYGSSREGLEKAWKTNDIVSLIVDTAGVKSYVEKLQANQFYFIYLKVSH 128

Query: 117 LDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           L++L+E +  +          D P +I LKR+ +R   R+    D
Sbjct: 129 LETLEERLVERG---------DEPTEI-LKRINSREFKRDLQLSD 163


>gi|254419772|ref|ZP_05033496.1| signal recognition particle-docking protein FtsY [Brevundimonas sp.
           BAL3]
 gi|196185949|gb|EDX80925.1| signal recognition particle-docking protein FtsY [Brevundimonas sp.
           BAL3]
          Length = 311

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT +  +   L  K   V +     G     AAR   L    D  GAE E+  
Sbjct: 114 GVNGSGKTTTLGKIAADLTAKGAKVMIV---AGDTFRAAARE-QLKVWADRAGAEFESRR 169

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
             A     V +    A  EG  ++L D            R  ++   +D L +I   +++
Sbjct: 170 DGADAAGLVFDAYAKARAEGFDVVLVD---------TAGRLQNKSALMDELLKIVRVLKK 220

Query: 128 VMP----DCTIILDLPV---DIGLKRVQNR 150
           + P    D  ++LD  V    +  +++  R
Sbjct: 221 IDPAAPHDTLLVLDATVGRNALAQEQIFGR 250


>gi|152980219|ref|YP_001355053.1| bifunctional shikimate kinase/3-dehydroquinate synthase
           [Janthinobacterium sp. Marseille]
 gi|151280296|gb|ABR88706.1| bifunctional shikimate kinase/3-dehydroquinate synthase
           [Janthinobacterium sp. Marseille]
          Length = 577

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 50/191 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L + L ++  D                        ++E       ++
Sbjct: 29  GLMGAGKTTVGRALAKKLNKRFIDS--------------------DHEIEERTGATIPLI 68

Query: 71  F----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           F     A+       VIR    +  I+L            G            L+     
Sbjct: 69  FEIEGEASFRQREAEVIRDLTAQQDIVLAT----------GGGAVLNAESRAYLKSRGT- 117

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ-IFLDIARNQP 185
                  I L   V+  ++R  +  +       D   RK +    + R+ ++ ++A    
Sbjct: 118 ------VIYLRASVNSIVQRTSHDKNRPLLQTGDP--RKTIEELSRIREPLYNEVAH--- 166

Query: 186 DRCHIVDSAHS 196
               ++D+   
Sbjct: 167 ---IVIDTGRP 174


>gi|148926182|ref|ZP_01809867.1| guanylate kinase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845353|gb|EDK22446.1| guanylate kinase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 207

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSC 57
           M   G  +   G  GAGK+T +  L    + + Y      TR+P          H + S 
Sbjct: 1   MKLQGFVLLISGPSGAGKSTLLKKLFDEFKDELYFSISSTTRKPREGEKNGVHYHFI-SH 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
              + G +++  +  A   ++         + AL  GKI++ D
Sbjct: 60  EEFQKGIDSDHFLEWARVHENFYGTSLKHTQDALDNGKIVVFD 102


>gi|126731446|ref|ZP_01747252.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Sagittula stellata E-37]
 gi|126707982|gb|EBA07042.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Sagittula stellata E-37]
          Length = 359

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          N G  +S  G  G GK+T + ++   L+  +  V +
Sbjct: 36 NRGELVSLLGPSGCGKSTLLRIVAGLLEADDGSVVL 71


>gi|84995142|ref|XP_952293.1| signal recognition particle receptor alpha subunit [Theileria
           annulata strain Ankara]
 gi|65302454|emb|CAI74561.1| signal recognition particle receptor alpha subunit, putative
           [Theileria annulata]
          Length = 547

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I F G+ G GK+T ++ +   L+   + V V
Sbjct: 348 IVFLGVNGVGKSTSLAKVAYLLKSSGFKVLV 378


>gi|83858261|ref|ZP_00951783.1| ABC transporter ATP-binding protein [Oceanicaulis alexandrii
          HTCC2633]
 gi|83853084|gb|EAP90936.1| ABC transporter ATP-binding protein [Oceanicaulis alexandrii
          HTCC2633]
          Length = 230

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N G FI+  G  G+GKTT ++LL
Sbjct: 32 INRGDFIAIMGPSGSGKTTLLNLL 55


>gi|330946056|gb|EGH47332.1| signal recognition particle-docking protein FtsY [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 205

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 89  GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 144

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 145 TGADSASVIFDAVQAAKARGIDVLIAD 171


>gi|330470032|ref|YP_004407775.1| adenylylsulfate kinase [Verrucosispora maris AB-18-032]
 gi|328813003|gb|AEB47175.1| adenylylsulfate kinase [Verrucosispora maris AB-18-032]
          Length = 509

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 16/36 (44%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + GL +   G+ G+GK+T    L   L+ +      
Sbjct: 325 HRGLVVFLTGLSGSGKSTIARGLADALREQGERTIT 360


>gi|325971780|ref|YP_004247971.1| alpha/beta hydrolase fold protein [Spirochaeta sp. Buddy]
 gi|324027018|gb|ADY13777.1| alpha/beta hydrolase fold protein [Spirochaeta sp. Buddy]
          Length = 280

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 28  LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPAL 87
           L    +DV+  R PG   +    +  L S   D  G   +A  + A R +HV  V     
Sbjct: 60  LFEAGFDVYCPRYPGHGTSG---KDFLSSKAEDWIGTAYDAFAYLAQRYEHVSLVGHSMG 116

Query: 88  MEGKILLCDRFLDSSYA 104
                ++ D F   + A
Sbjct: 117 GAIATIIADAFDADTLA 133


>gi|323448881|gb|EGB04774.1| hypothetical protein AURANDRAFT_32008 [Aureococcus
          anophagefferens]
          Length = 254

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          I   G   AGKTT ++ L  +LQ + + V++  E
Sbjct: 48 IVLTGGPCAGKTTALARLSGYLQERGFRVYMIPE 81


>gi|291461095|ref|ZP_06026942.2| guanylate kinase [Fusobacterium periodonticum ATCC 33693]
 gi|291378893|gb|EFE86411.1| guanylate kinase [Fusobacterium periodonticum ATCC 33693]
          Length = 191

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 7  MSLGALYVVSGPSGAGKSTVCKLVRERL 34


>gi|269114848|ref|YP_003302611.1| ABC transporter ATP-binding protein [Mycoplasma hominis]
 gi|268322473|emb|CAX37208.1| ABC transporter ATP-binding protein [Mycoplasma hominis ATCC
          23114]
          Length = 646

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          +N G  ++  G  G+GKTT ++ +   L+     +  +
Sbjct: 53 INKGELVTLLGPSGSGKTTTLNAIAGLLRPTGGKIFFS 90


>gi|257869224|ref|ZP_05648877.1| excinuclease ABC [Enterococcus gallinarum EG2]
 gi|257803388|gb|EEV32210.1| excinuclease ABC [Enterococcus gallinarum EG2]
          Length = 938

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G FI+  G+ G+GK+T +       L + + R +      ++  G  A E    +
Sbjct: 632 GKFIAVTGVSGSGKSTLVNEILKKALAQKINRNSNKPGKYKKLTGYEAIEKLIDI 686


>gi|269128495|ref|YP_003301865.1| adenylate kinase [Thermomonospora curvata DSM 43183]
 gi|268313453|gb|ACY99827.1| adenylate kinase [Thermomonospora curvata DSM 43183]
          Length = 217

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 61/232 (26%), Gaps = 46/232 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +   L               +   E  R         +   + 
Sbjct: 3   IVLVGPPGAGKGTQAQFIASHLSVPKISTGDIFRANVSSGTELGRKAKQYMDRGDLVPDE 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             I     RL            +G   L D F  +    Q  +      +   L      
Sbjct: 63  ITIAMVRDRLA------EKDAADGF--LLDGFPRNVPQAQTLKKILDSEWGTRL------ 108

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-----------------RKDVMI 169
               D  + L +  +  ++R+  R +  +   + + +                 ++D   
Sbjct: 109 ----DVVLELRVDEEEVVRRLSGRRTCSQCGKIWHVDWDDKQDDICDDCGGQLFQRDDDK 164

Query: 170 HEKRRQIFLDIARNQ---------PDRCHI-VDSAHSFQSVATNILNIVWEL 211
            +  R   L++ + Q          +   + +D+    + V    L  +   
Sbjct: 165 EDVVRHR-LEVYQEQTAPLVSFYADEGILVGIDATGPIEEVTERALQAIRNF 215


>gi|224540341|ref|ZP_03680880.1| hypothetical protein BACCELL_05254 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518032|gb|EEF87137.1| hypothetical protein BACCELL_05254 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 201

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 26/166 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 2   LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              +++       HV       L EGK +        +Y+Y       + + ++  + + 
Sbjct: 61  FEWSLL-----SKHVA-----MLREGKSI-----EQPTYSYLTCTREPETIHIEPREVVI 105

Query: 125 VQEVMP----------DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           ++ ++           D  I +D   D  L RV  R  +      +
Sbjct: 106 IEGILALCDKKLRSMMDLKIFVDADPDERLIRVIQRDVVERGRTAE 151


>gi|188586257|ref|YP_001917802.1| cytidylate kinase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350944|gb|ACB85214.1| cytidylate kinase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 231

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 2  NSG-LFISFEGIEGAGKTTHISLLKRFL 28
          N G L I+ +G  GAGK+T   +L   L
Sbjct: 4  NKGDLVIAIDGPAGAGKSTIAKMLASRL 31


>gi|26554009|ref|NP_757943.1| glutamine transport ATP-binding protein [Mycoplasma penetrans HF-2]
 gi|26454017|dbj|BAC44347.1| glutamine transport ATP-binding protein [Mycoplasma penetrans HF-2]
          Length = 441

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL 24
           +N+G F+ F G  G+GKTT ++L+
Sbjct: 178 INNGDFVVFLGPSGSGKTTLMNLI 201


>gi|87301807|ref|ZP_01084641.1| possible ABC transporter, ATP-binding component [Synechococcus
          sp. WH 5701]
 gi|87283375|gb|EAQ75330.1| possible ABC transporter, ATP-binding component [Synechococcus
          sp. WH 5701]
          Length = 244

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G  G+GK+T + L+   L+     V +T +P
Sbjct: 51 GGNGSGKSTLLRLIAGLLEPSGGRVALTLKP 81


>gi|118579712|ref|YP_900962.1| arginine/ornithine transport system ATPase [Pelobacter propionicus
           DSM 2379]
 gi|118502422|gb|ABK98904.1| methylmalonyl-CoA mutase metallochaperone MeaB [Pelobacter
           propionicus DSM 2379]
          Length = 381

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEAARHVLLSCGVDEF 62
           G+ GAGK+T I  L   L  + + V V      +R  GG+   +  R   LS   + F
Sbjct: 114 GVPGAGKSTLIEALGTRLCDRGHRVAVLAVDPSSRVTGGSILGDKTRMESLSRHSNAF 171


>gi|329769857|ref|ZP_08261256.1| hypothetical protein HMPREF0433_01020 [Gemella sanguinis M325]
 gi|328837911|gb|EGF87535.1| hypothetical protein HMPREF0433_01020 [Gemella sanguinis M325]
          Length = 357

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L+++   V +    G T  A A     L       GA+     
Sbjct: 146 GVNGVGKTTSIGKLAHNLKKEGKKVLIAA--GDTFRAGAIDQ--LDVWAKRSGADIVKSH 201

Query: 71  FAAARLDHVENVIRPALMEGKIL-LCD 96
             A     + + I+ A  +G  + LCD
Sbjct: 202 EGADSAAIIFDAIQSAKAKGYDVLLCD 228


>gi|322390630|ref|ZP_08064145.1| macrolide export ATP-binding/permease protein MacB [Streptococcus
          parasanguinis ATCC 903]
 gi|321142709|gb|EFX38172.1| macrolide export ATP-binding/permease protein MacB [Streptococcus
          parasanguinis ATCC 903]
          Length = 243

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G FIS  GI G+GK+T ++ L    +  + +V +
Sbjct: 37 GEFISILGISGSGKSTLLNCLASLSEPSSGEVVI 70


>gi|320529832|ref|ZP_08030909.1| guanylate kinase [Selenomonas artemidis F0399]
 gi|320137850|gb|EFW29755.1| guanylate kinase [Selenomonas artemidis F0399]
          Length = 199

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 47/167 (28%), Gaps = 24/167 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I   G  G GK      L    +   Y V  T        + A R         
Sbjct: 1   MKKGLLIVISGASGTGKGAVCKELLSRERELAYSVSAT--------SRAPRDGEAEGREY 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    E     AA        +              +  +  A   ER ++    L  +
Sbjct: 53  YFRTRIEFEEMIAAGAFLEYADVYGN-----------YYGTPLAPIEERRAAGEDILLEI 101

Query: 121 Q---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                ++V E  PD T I  LP   +   +R+  R +  E       
Sbjct: 102 DTQGALNVMERCPDGTFIFLLPPSFEELRRRITGRGTETEENLARRL 148


>gi|312864503|ref|ZP_07724734.1| ABC transporter, ATP-binding protein [Streptococcus downei F0415]
 gi|311099630|gb|EFQ57843.1| ABC transporter, ATP-binding protein [Streptococcus downei F0415]
          Length = 232

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          ++SG  I   G  G+GKTT I L+   L++ + D+ V
Sbjct: 27 ISSGKIIGLLGPNGSGKTTLIKLINGLLKQTSGDIVV 63


>gi|296168597|ref|ZP_06850401.1| adenylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896660|gb|EFG76299.1| adenylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 181

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 63/214 (29%), Gaps = 49/214 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVD 60
           +   G  GAGK T    L   L         T E        GT     A+   L  G  
Sbjct: 3   VVLLGPPGAGKGTQAQKLSEKL---GIPHISTGELFRSNIENGTKLGLEAKR-YLDAGDL 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                             V++ +  A      +L D F  S+     E+  + H  L+  
Sbjct: 59  VPSELT---------NQLVDDRLSDADAANGFIL-DGFPRST-----EQAKALHAMLER- 102

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFL 178
                +    D  +   +  +  L+R+++R    ++    L+              +++ 
Sbjct: 103 -----RGTDIDAVLEFRVSQEELLQRLKSRGRADDTDDVILNRM------------KVYR 145

Query: 179 D----IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           D    +     D    VD+  +   V    L  +
Sbjct: 146 DETAPLLEYYRDELKTVDAIGTMDEVFARALQAL 179


>gi|282860153|ref|ZP_06269228.1| deoxynucleoside kinase [Prevotella bivia JCVIHMP010]
 gi|282587042|gb|EFB92272.1| deoxynucleoside kinase [Prevotella bivia JCVIHMP010]
          Length = 208

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 61/200 (30%), Gaps = 33/200 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGKTT   +L    +R  +  H   EP             L     +    A
Sbjct: 3   IAIAGNIGAGKTTLTKMLS---KRYGWKAHF--EPVDNNP-------YLEDYYGDMDRWA 50

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122
             +   F   R   V  + +        ++ DR  F D+        +       D    
Sbjct: 51  FNLQIYFLNKRFRDVVEISK----SNDTIIQDRTIFEDARIFAPNLHEMGLMSDRDFNNY 106

Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
             + ++M      PD  I +   +   +  +Q R         DY +   +   +   Q 
Sbjct: 107 TDLFDLMMSLVKLPDLLIYIRCSIPRLIDHIQQRGR-------DYEQTMRIDYLKGLNQR 159

Query: 177 FLDIARNQPDRCHIVDSAHS 196
           + D  +       IVD   +
Sbjct: 160 YEDWIKTYKGHLMIVDGDAT 179


>gi|254000343|ref|YP_003052406.1| ABC transporter-like protein [Methylovorus sp. SIP3-4]
 gi|253987022|gb|ACT51879.1| ABC transporter related [Methylovorus sp. SIP3-4]
          Length = 276

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
            G FI   G  G GKTT ++LL
Sbjct: 46 KPGEFIVLLGPSGCGKTTLLNLL 68


>gi|185178708|ref|ZP_02964526.1| guanylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
 gi|188024328|ref|ZP_02997006.1| guanylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
 gi|188518506|ref|ZP_03003980.1| guanylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195867772|ref|ZP_03079773.1| guanylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
 gi|225551507|ref|ZP_03772453.1| guanylate kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
 gi|184209303|gb|EDU06346.1| guanylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
 gi|188019008|gb|EDU57048.1| guanylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
 gi|188997890|gb|EDU66987.1| guanylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|195660627|gb|EDX53883.1| guanylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
 gi|225379322|gb|EEH01687.1| guanylate kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
          Length = 190

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 40/222 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVT----RE---PGGTPAAEAARH 52
           M  G  I F G  G GK T +S +    +    Y V +T    RE    G          
Sbjct: 1   MKRGKLIVFSGPSGVGKHTILSKIIDRKELNLAYSVSMTTRKKREGEINGVDYYFVNDEE 60

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
              +   +E    AE   F   +      V+     EGK ++               +  
Sbjct: 61  FKKAISNNELIEWAE---FVGNKYGTPRFVVEKLRNEGKNVIL--------------EIE 103

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               L  L+     ++    +I L LP    L  ++NR   R +  L+  E+       +
Sbjct: 104 VVGALQVLELFKNDDL---ISIFL-LPP--SLDELKNRLLKRNTETLETIEK-------R 150

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            ++   +++     + +I++   +    A  +  I+ + +++
Sbjct: 151 IQKASHELSIKDHYKYNIIN--DNPDHAADQLAEIILDEIKR 190


>gi|150021672|ref|YP_001307026.1| signal recognition particle protein [Thermosipho melanesiensis
           BI429]
 gi|149794193|gb|ABR31641.1| signal recognition particle protein [Thermosipho melanesiensis
           BI429]
          Length = 435

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 24/126 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L   L++K    ++       PAA     ++        G + +  V
Sbjct: 105 GLQGSGKTTSAAKLANLLKKKGRKPYLVAADTYRPAA--IDQLI------TLGKKIDVPV 156

Query: 71  FAAARLDHVENVIRPALME-----GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           +   R  H   ++  AL E       +++ D            R    +  ++ L EI  
Sbjct: 157 YCGDRK-HPIKIVEEALKEVKDSGYDVVIFD---------TAGRLHIDNEMMNELVEI-K 205

Query: 126 QEVMPD 131
           + + PD
Sbjct: 206 EILSPD 211


>gi|159897148|ref|YP_001543395.1| guanylate kinase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159890187|gb|ABX03267.1| Guanylate kinase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 210

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 76/235 (32%), Gaps = 60/235 (25%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L +   G  G GK T +  ++ F        H       T   +      L      F +
Sbjct: 18  LLVIISGPSGVGKDTVLMRMREF----GMPFHFVV--TTTSRGQRPGE--LEGFDYNFVS 69

Query: 65  EAEAIVFAA--ARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
           +AE     A    L+H           ++ +R AL  GK ++           QG     
Sbjct: 70  KAEFETMIAQNDLLEHAVVYGEYKGIPKSQVRDALASGKDVIL------RIDVQGAA--- 120

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
                      ++++++PD  +I  +P       + NR  LR +   +  ER+       
Sbjct: 121 -----------TMRKLVPDAVLIFIVPPSSAE--LANRLRLRRTESAEGLERR------- 160

Query: 173 RRQIFLDIARNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
                + +A  +  R       +++        A+ I  I+    + R+ P   K
Sbjct: 161 -----MALAEEEMGRVDEFDYVVMNPESRPDEAASMIQAIIRAE-KSRIRPRRIK 209


>gi|30523354|gb|AAP31910.1| adenylate kinase [Schistosoma japonicum]
 gi|189503106|gb|ACE06934.1| unknown [Schistosoma japonicum]
 gi|226477996|emb|CAX72691.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|226478622|emb|CAX72806.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|226487108|emb|CAX75419.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|226487110|emb|CAX75420.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|226487112|emb|CAX75421.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257205716|emb|CAX82509.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257205746|emb|CAX82524.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257205752|emb|CAX82527.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257205980|emb|CAX82641.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257206010|emb|CAX82656.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257206016|emb|CAX82659.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257206300|emb|CAX82801.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257206316|emb|CAX82809.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257206600|emb|CAX82928.1| adenylate kinase 1 [Schistosoma japonicum]
 gi|257206718|emb|CAX82987.1| adenylate kinase 1 [Schistosoma japonicum]
          Length = 197

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 65/208 (31%), Gaps = 36/208 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    L                     + +  R  + S        +A    
Sbjct: 16  GGPGSGKGTQCEKLVHKFNFN-----------HLSSGDLLRAEVQSGSQKGKELKA---- 60

Query: 71  FAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
               R + V   V+   L E  I L D   +  +   G             ++     + 
Sbjct: 61  -MMERGELVPLEVVLSLLKEAMIKLVD--KNCHFLIDGYPRELDQGL--KFEKEVCPCL- 114

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------N 183
             C I  D+  ++  KR+  R     +   +  +  +  I ++ R  F ++ +       
Sbjct: 115 --CVINFDVSEEVMRKRLLKR-----AETSNRVDDNEETIVKRFR-TFNELTKPVIEYYK 166

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + ++   +D++ +   +   + + + + 
Sbjct: 167 KQNKVITIDASGTVDDIFEKLTHELQKF 194


>gi|72076371|ref|XP_796447.1| PREDICTED: similar to methylmalonic aciduria type A
           [Strongylocentrotus purpuratus]
 gi|115969881|ref|XP_001175923.1| PREDICTED: similar to methylmalonic aciduria type A
           [Strongylocentrotus purpuratus]
          Length = 354

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEF 62
           G  GAGK+T I  + + L  + + V  +  +P     GG+   +  R   LS   + +
Sbjct: 83  GPPGAGKSTFIEAIGKKLTAEGHRVAVLAVDPSSSITGGSLLGDKTRMTELSRDPNAY 140


>gi|7387809|sp|O49204|KAPS_CATRO RecName: Full=Adenylyl-sulfate kinase, chloroplastic; AltName:
           Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase; Short=APS
           kinase; Flags: Precursor
 gi|2832300|gb|AAC31145.1| adenosine-5'-phosphosulfate-kinase [Catharanthus roseus]
          Length = 312

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 18/95 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L R L  K     +T               +L      
Sbjct: 133 QRGCVIWITGLSGSGKSTLACALSRGLHAKGK---LTY--------------ILDGDNVR 175

Query: 62  FGAEAEAIVFAAARLDHVENVIRPA-LMEGKILLC 95
            G  ++    A  R +++  +   A L     ++C
Sbjct: 176 HGLNSDLSFKAEDRAENIRRIGEVAKLFADAGVIC 210


>gi|326422437|gb|EGD71836.1| Putative signal recognition particle protein [Candidatus
           Parvarchaeum acidiphilum ARMAN-4_'5-way FS']
          Length = 437

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 26/139 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT  + L  + +++ Y V +       PAA      L      +         
Sbjct: 104 GLFGSGKTTTAAKLANYYKKRGYRVLLLGLDTFRPAAYQQLEQLSKQINVKI-------- 155

Query: 71  FAAARLDHVENVIRPAL---MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A   D     I+ A+       I++ D            RD   +  +  + ++  + 
Sbjct: 156 --AGGGDDPVKAIKNAIGSFKNFDIVIAD---------SAGRDILDNALVKEI-KLVKET 203

Query: 128 VMP-DCTIILDLPVDIGLK 145
           + P + T++  +P D+G  
Sbjct: 204 LKPNNVTLV--IPADLGQN 220


>gi|326383522|ref|ZP_08205208.1| hypothetical protein SCNU_11315 [Gordonia neofelifaecis NRRL
          B-59395]
 gi|326197606|gb|EGD54794.1| hypothetical protein SCNU_11315 [Gordonia neofelifaecis NRRL
          B-59395]
          Length = 187

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          I+ +G  GAGK+T  + L R L  +     +  
Sbjct: 28 IAIDGPSGAGKSTFAAELVRALSDRGRQSVLIS 60


>gi|325289807|ref|YP_004265988.1| cytidylate kinase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965208|gb|ADY55987.1| cytidylate kinase [Syntrophobotulus glycolicus DSM 8271]
          Length = 218

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 10/79 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  GAGK+T   ++   L         T          A  + +L  G+     E 
Sbjct: 3  IAIDGPAGAGKSTVAKIVADRL---GIPYLDT-----GSMYRAIAYQVLKSGISAENEEE 54

Query: 67 EAIVFAAAR--LDHVENVI 83
             + +AA   LDH+ N I
Sbjct: 55 TVKIASAANISLDHLNNRI 73


>gi|325298976|ref|YP_004258893.1| Guanylate kinase [Bacteroides salanitronis DSM 18170]
 gi|324318529|gb|ADY36420.1| Guanylate kinase [Bacteroides salanitronis DSM 18170]
          Length = 188

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 6/101 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           MN G  I F    G+GK+T I+ LLK+ L  +      +R P GT         L     
Sbjct: 1   MN-GKLIIFSAPSGSGKSTIINYLLKQGLNLRFSISATSRPPRGTEQNGVEYFFLSPEEF 59

Query: 60  DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96
            E  A  E +    V+       +++ +   L EG+ ++ D
Sbjct: 60  KEGIANNEFVEYEEVYPGRFYGTLKSQVEKQLAEGQNIIFD 100


>gi|322833091|ref|YP_004213118.1| ABC transporter [Rahnella sp. Y9602]
 gi|321168292|gb|ADW73991.1| ABC transporter related protein [Rahnella sp. Y9602]
          Length = 276

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G  G+GK+T I L+ +       ++ +   P       A R +
Sbjct: 58  GPSGSGKSTLIRLINQLESASGGEILIDNLPTRNLKGAALRQL 100


>gi|297566512|ref|YP_003685484.1| ABC transporter-like protein [Meiothermus silvanus DSM 9946]
 gi|296850961|gb|ADH63976.1| ABC transporter related protein [Meiothermus silvanus DSM 9946]
          Length = 268

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
           G FIS  G  G GKTT + LL   +Q
Sbjct: 40 QGEFISLIGPSGCGKTTLLRLLADLIQ 66


>gi|294674040|ref|YP_003574656.1| uridine kinase [Prevotella ruminicola 23]
 gi|294473671|gb|ADE83060.1| uridine kinase [Prevotella ruminicola 23]
          Length = 204

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 36/179 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GKTT +  + + L      V    +     T      R  +     D   A    
Sbjct: 8   GGTGSGKTTVVKRISKALPPHCAAVVPLDSYYNDTTGMTPEERKAI---NFDHPDAFDWK 64

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---------- 118
           ++      +H++      L  G+ +        +Y+Y       + + ++          
Sbjct: 65  LL-----TEHIKK-----LKNGEAI-----EQPTYSYIESNRQKETIHVEPKPVIIIEGI 109

Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----LDYFERKDVMIHEK 172
            +L    ++++M D  I +D   D+ L R   R  +         LD +E+    +HE+
Sbjct: 110 MALHHKKLRDMM-DLKIFVDTDSDVRLIRNIRRDVVERGRTVEMVLDRYEKVLKPMHEQ 167


>gi|293363219|ref|ZP_06610103.1| ABC transporter, ATP-binding protein [Mycoplasma alligatoris
           A21JP2]
 gi|292553078|gb|EFF41827.1| ABC transporter, ATP-binding protein [Mycoplasma alligatoris
           A21JP2]
          Length = 246

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 7/93 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +N G  ++  G+ GAGKTT   LL R+L+     V +  +       +    ++   G  
Sbjct: 28  INKGDMVAIVGLSGAGKTTIFKLLSRYLKPTFGTVKIFEKNINKLNKKEWNQIIKKIGF- 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
               +   I        +V N I  AL   K +
Sbjct: 87  -LSQKTNLIP-----SQNVYNNILKALKNHKNI 113


>gi|302654685|ref|XP_003019143.1| ABC multidrug transporter, putative [Trichophyton verrucosum HKI
            0517]
 gi|291182847|gb|EFE38498.1| ABC multidrug transporter, putative [Trichophyton verrucosum HKI
            0517]
          Length = 1276

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRFLQ 29
             G +++  G  G+GK+T I LL+RF +
Sbjct: 1056 RGQYVALVGPSGSGKSTVIRLLERFFE 1082


>gi|302508445|ref|XP_003016183.1| ABC multidrug transporter, putative [Arthroderma benhamiae CBS
            112371]
 gi|291179752|gb|EFE35538.1| ABC multidrug transporter, putative [Arthroderma benhamiae CBS
            112371]
          Length = 1266

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRFLQ 29
             G +++  G  G+GK+T I LL+RF +
Sbjct: 1046 RGQYVALVGPSGSGKSTVIRLLERFFE 1072


>gi|283954733|ref|ZP_06372250.1| putative guanylate kinase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793786|gb|EFC32538.1| putative guanylate kinase [Campylobacter jejuni subsp. jejuni 414]
          Length = 205

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 7/100 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  +   G  G GK+T +  L    + + Y      TR+P          H +      
Sbjct: 2   KGFVLLISGPSGVGKSTLLKKLFDEFEDEVYFSISSTTRKPREGEKNGIHYHFISHKEFQ 61

Query: 61  EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
           + G +++  +  A   ++         + AL  GKI++ D
Sbjct: 62  K-GIDSDHFLEWARVHENFYGTSLKHTQDALDNGKIVVFD 100


>gi|269115220|ref|YP_003302983.1| Spermidine/putrescine ABC transporter ATP-binding protein PotA
          [Mycoplasma hominis]
 gi|268322845|emb|CAX37580.1| Spermidine/putrescine ABC transporterATP-binding protein potA
          [Mycoplasma hominis ATCC 23114]
          Length = 469

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N G FI+  G  G+GKTT + ++
Sbjct: 38 INKGEFITLLGPSGSGKTTILRII 61


>gi|255638486|gb|ACU19552.1| unknown [Glycine max]
          Length = 267

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L          +HV       E    P A   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSSLYEHCVAARRSIHVVNLDPAAENFDYPVAMDIRELISLDDVMEELGL 68

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
               +     ++H+E+ +   L E
Sbjct: 69 GPNGGLVYC--MEHLEDNLDDWLTE 91


>gi|227872292|ref|ZP_03990650.1| possible dephospho-CoA kinase [Oribacterium sinus F0268]
 gi|227841864|gb|EEJ52136.1| possible dephospho-CoA kinase [Oribacterium sinus F0268]
          Length = 200

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 68/212 (32%), Gaps = 46/212 (21%)

Query: 15  AGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           +GK+T +S+L+     +              E       +     + +       +    
Sbjct: 20  SGKSTVLSILQGDFSYRILRMDELAKALYQEEAVLREIKKLLPASVFTKEGALSFSRLRT 79

Query: 69  IVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           ++F    R  H+E +I P                   +Q      + + L   ++++V+ 
Sbjct: 80  LLFTEPERKKHLEELIHP-----------------LVFQEVSKEIEQVRLLR-EKLAVET 121

Query: 128 VMP--------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +P        D    LD   +   KR+       ES  L+  E   ++  +   + F +
Sbjct: 122 ALPNQDFLSQCDLIFYLDASEETRCKRL------IESRGLEKEEAFQIIHSQSV-KRFKE 174

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            A+       ++++  S + V   I      L
Sbjct: 175 QAQ------LVINTEESIERVRDEICQYFQRL 200


>gi|283798403|ref|ZP_06347556.1| taurine import ATP-binding protein TauB [Clostridium sp. M62/1]
 gi|291073988|gb|EFE11352.1| taurine import ATP-binding protein TauB [Clostridium sp. M62/1]
 gi|295092849|emb|CBK78956.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase
          component [Clostridium cf. saccharolyticum K10]
          Length = 250

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G F+S  G  G GK+T + LL   L++++  V V
Sbjct: 26 KEGEFVSILGPSGCGKSTILKLLTGVLKKESGSVLV 61


>gi|218898748|ref|YP_002447159.1| hypothetical protein BCG9842_B1552 [Bacillus cereus G9842]
 gi|228902154|ref|ZP_04066318.1| hypothetical protein bthur0014_33330 [Bacillus thuringiensis IBL
           4222]
 gi|228966554|ref|ZP_04127606.1| hypothetical protein bthur0004_33630 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218545315|gb|ACK97709.1| conserved hypothetical protein [Bacillus cereus G9842]
 gi|228793133|gb|EEM40684.1| hypothetical protein bthur0004_33630 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228857580|gb|EEN02076.1| hypothetical protein bthur0014_33330 [Bacillus thuringiensis IBL
           4222]
          Length = 192

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 25/158 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+ + Y V     P   P  E  + + L     E     
Sbjct: 5   ISLQGPMASGKTTL----AKRLEERGYSVIY-ENP--YPIVEKRKQLNLDVNSKEG---- 53

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       +        G+    +    D
Sbjct: 54  ----FIINQKMFIEVKIKEFQNVKDSVVIFDRGPEDIEFYTLFYPMIIGKEWDIETGLKD 109

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
            L ++  +E   D    LD+       R  N  + + S
Sbjct: 110 ELYKL--RECRSDAIFYLDVTKKNVYDRKNNDRTRKRS 145


>gi|160903184|ref|YP_001568765.1| ABC transporter related [Petrotoga mobilis SJ95]
 gi|160360828|gb|ABX32442.1| ABC transporter related [Petrotoga mobilis SJ95]
          Length = 253

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 25/54 (46%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          +N G  I+  G  G+GK+T +  L   L+ K  ++++        + +    ++
Sbjct: 25 LNKGELIALLGPNGSGKSTILKCLNGTLKPKTGEIYIENYNIKDLSYKEIAKLI 78


>gi|121533421|ref|ZP_01665249.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
 gi|121307980|gb|EAX48894.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
          Length = 266

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 37/173 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTP---AAEAARHVLLSCGVDEFGAEAEAIV 70
           GAGKTT +  L   L    Y      +   TP     EA R +           + E   
Sbjct: 52  GAGKTTALRKLVALLNPNKYKALYISDSALTPRNFYWEALRQL-----------DYEPRF 100

Query: 71  FAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
           +       +   +     +GK  +++ D       A+           +  L   ++  +
Sbjct: 101 YRGDAKRQLHKAVLELKEQGKVPVVIVD------EAH--LLGKEMLEEIRFLLNFNMDSM 152

Query: 129 MPDCTIILDLPVDIGLKR---------VQNRYSLR-ESACLDYFERKDVMIHE 171
            P  ++IL    +  L+R         +  R ++R     +D  E ++ ++H 
Sbjct: 153 SP-MSLILTGQPE--LRRILQLNIYEAIAQRINIRYHLPAMDRAETQEYILHH 202


>gi|114800012|ref|YP_758815.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
 gi|114740186|gb|ABI78311.1| shikimate kinase [Hyphomonas neptunium ATCC 15444]
          Length = 186

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 33/157 (21%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I+  G+ GAGK+T    L   L     D + +       A  +   +    G  +F 
Sbjct: 16  GRTIALVGLMGAGKSTVGRRLAEKL---GRDFYDSDHEIEKAAGLSISDIFAKHGEADF- 71

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                      R +  + VIR  L     +L            G            L+E 
Sbjct: 72  ----------RRGE--KQVIRRLLDLQPHVLAT----------GGGAYLDPDTRAILRER 109

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +        T+ L+  ++   +RVQ R +       D
Sbjct: 110 A-------ITVWLNADLETLWRRVQKRDTRPLLQRAD 139


>gi|91228579|ref|ZP_01262498.1| adenylylsulfate kinase [Vibrio alginolyticus 12G01]
 gi|269964699|ref|ZP_06178937.1| adenylylsulfate kinase [Vibrio alginolyticus 40B]
 gi|91187858|gb|EAS74171.1| adenylylsulfate kinase [Vibrio alginolyticus 12G01]
 gi|269830598|gb|EEZ84819.1| adenylylsulfate kinase [Vibrio alginolyticus 40B]
          Length = 205

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS 109


>gi|24216986|ref|NP_714467.1| ABC transporter ATP-binding protein [Leptospira interrogans
          serovar Lai str. 56601]
 gi|24198387|gb|AAN51485.1| ABC transporter ATP-binding protein [Leptospira interrogans
          serovar Lai str. 56601]
          Length = 126

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G F++  G  GAGKTT I +L+
Sbjct: 37 IHKGEFVALLGPNGAGKTTLIEMLE 61


>gi|16081452|ref|NP_393796.1| ATPase [Thermoplasma acidophilum DSM 1728]
 gi|10639459|emb|CAC11461.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 593

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           SG+ ++  G  GAGK+T +  L  F   +   V     P     ++  
Sbjct: 256 SGILVA--GAPGAGKSTFVQALAEFFNARGKIVKTMERPRDLDVSKEI 301


>gi|86138917|ref|ZP_01057489.1| guanylate kinase [Roseobacter sp. MED193]
 gi|85824564|gb|EAQ44767.1| guanylate kinase [Roseobacter sp. MED193]
          Length = 213

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 55/174 (31%), Gaps = 34/174 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL I      GAGK+T    L+ +    ++ V   TR P          H +     D
Sbjct: 4   RRGLLIILSSPSGAGKSTLAKRLRSWDDSISFSVSATTRNPRPGEVNGQDYHFV--SVDD 61

Query: 61  EFGAEAEAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
              A  E        L+H           +  +R A+ +G+ +L D        +QG + 
Sbjct: 62  FKSAVTE-----NDMLEHAHVFGNFYGSPKGPVRAAIEDGQDVLFD------IDWQGAQQ 110

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
                       +S+  + P  T           +R+++R            E+
Sbjct: 111 IRNSELGQ--HTLSIFLLPPSIT--------ELKRRLESRGQDDAEVISRRMEK 154


>gi|269125275|ref|YP_003298645.1| adenylylsulfate kinase [Thermomonospora curvata DSM 43183]
 gi|268310233|gb|ACY96607.1| adenylylsulfate kinase [Thermomonospora curvata DSM 43183]
          Length = 495

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 6/54 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +  GL + F G+ G+GK+T    L   L  +        +       +  R +L
Sbjct: 315 LRRGLTVFFTGLSGSGKSTVARGLADALIERGGRTVTLLD------GDVVRRLL 362


>gi|170781732|ref|YP_001710064.1| putative ABC transporter ATP-binding protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169156300|emb|CAQ01447.1| putative ABC transporter ATP-binding protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 411

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 24/164 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDV-----HVTREPGGTPAAEAARHVLLS 56
            G  ++  G  G GKTT + ++  FL+  +   V          P   P+A   ++  L 
Sbjct: 53  RGELVALLGPSGCGKTTTLRMIAGFLEPDRGSVVIGGRDVTASGPDKRPSAMVFQNYALW 112

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +  F   A  +       D V   +  AL     +       S  A+    +  +   
Sbjct: 113 PHLTVFKNVAFPLTLRKLPKDEVARRVMAALE---TVNLAHHAHSRPAHISGGEQQRAAL 169

Query: 117 LDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRE 155
             ++ +       PD  + LD     L   +   RV+ R  +R+
Sbjct: 170 ARAIVQ------EPDL-LFLDEPLSNLDAKL---RVKVREEIRD 203


>gi|158424091|ref|YP_001525383.1| guanosine monophosphate kinase like protein [Azorhizobium
           caulinodans ORS 571]
 gi|166201233|sp|A8IA58|TYPH_AZOC5 RecName: Full=Putative thymidine phosphorylase; AltName:
           Full=TdRPase
 gi|158330980|dbj|BAF88465.1| guanosine monophosphate kinase like protein [Azorhizobium
           caulinodans ORS 571]
          Length = 693

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 53/177 (29%), Gaps = 24/177 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGV 59
           M SGLF    G  G+GK T I   K  L      V   R       A   A   L     
Sbjct: 4   MGSGLFFFVVGPSGSGKDTLIEGAKAALGPTGRYVFARRAITRPADAGGEAHEALSVDQF 63

Query: 60  DEFGAEAEAIVFAAAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           D   A+   ++   A      +   +   +  G+ ++                +     +
Sbjct: 64  DAVLAQGGFLIHWEAHGLKYGLRATLLDDMAAGRHVIA---------------NGSRAMV 108

Query: 118 DSLQEISVQEVMPDCTII-LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            +L E      +P   ++ +  P  +  +R++ R            ERK     E  
Sbjct: 109 AALAE-----RVPHLVVVEITAPEAVLAERLKGRGREGAENIAARLERKVPPFPESV 160


>gi|153007546|ref|YP_001368761.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Ochrobactrum anthropi ATCC 49188]
 gi|151559434|gb|ABS12932.1| sulfate adenylyltransferase, large subunit [Ochrobactrum anthropi
           ATCC 49188]
          Length = 644

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSGSGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R +++     V R     G ++L      S +  Q ERD  +    +   E   
Sbjct: 510 GFSDEDRAENIRRVGEVARLMTDAGLVVLV--SFISPF--QAERDRIRARLPEG--EFVE 563

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P++  + R
Sbjct: 564 --------IFVDTPIEECIAR 576


>gi|229541670|ref|ZP_04430730.1| ABC transporter related [Bacillus coagulans 36D1]
 gi|229326090|gb|EEN91765.1| ABC transporter related [Bacillus coagulans 36D1]
          Length = 249

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
          +  G F +F G  G GK+T ++++    +     V +  +P G
Sbjct: 26 IRKGEFCTFIGPSGCGKSTLLNIIAGIEKANGGKVLLDGKPDG 68


>gi|118591702|ref|ZP_01549098.1| probable sugar ABC transporter, ATP-binding protein [Stappia
          aggregata IAM 12614]
 gi|118435695|gb|EAV42340.1| probable sugar ABC transporter, ATP-binding protein [Stappia
          aggregata IAM 12614]
          Length = 331

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLK 25
          MN  +G F++  G  GAGKTT + L+ 
Sbjct: 24 MNIPNGAFVTLLGPTGAGKTTILRLIA 50


>gi|115386562|ref|XP_001209822.1| hypothetical protein ATEG_07136 [Aspergillus terreus NIH2624]
 gi|114190820|gb|EAU32520.1| hypothetical protein ATEG_07136 [Aspergillus terreus NIH2624]
          Length = 1186

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 20/27 (74%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           + +G F++F G  G GK+T ISLL+R+
Sbjct: 963 IKAGQFVAFVGASGCGKSTLISLLERY 989


>gi|91215978|ref|ZP_01252947.1| Deoxynucleoside kinase subfamily, putative [Psychroflexus torquis
           ATCC 700755]
 gi|91185955|gb|EAS72329.1| Deoxynucleoside kinase subfamily, putative [Psychroflexus torquis
           ATCC 700755]
          Length = 204

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 58/192 (30%), Gaps = 38/192 (19%)

Query: 14  GAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71
           GAGKTT   L+ +    + +  DV     P      E  +          +    +    
Sbjct: 10  GAGKTTLTKLIAKHYNWRAEYEDVI--ENPFLEDFYEDMKR---------WSFNLQIYFL 58

Query: 72  AAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQHLFLDSLQ 121
            +         I         ++ DR  + D+        +      RD   +  L  L 
Sbjct: 59  NSRFRQ-----ILEIRESNTDIIQDRTIYEDAFIFAPNLHAMGLMSNRDFKNYSSLFDLM 113

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           E   +   PD  I L   V   +K++Q R    E++         +    K  + +    
Sbjct: 114 ESVTEA--PDLLIYLRSSVPNLVKQIQKRGRDYENSI-------SIDYLNKLNERYEAWI 164

Query: 182 RN-QPDRCHIVD 192
           +     +  ++D
Sbjct: 165 QCYDKSKLLVID 176


>gi|15790661|ref|NP_280485.1| cytidylate kinase [Halobacterium sp. NRC-1]
 gi|169236400|ref|YP_001689600.1| cytidylate kinase [Halobacterium salinarum R1]
 gi|22001680|sp|Q9HPA5|KCY_HALSA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|229822711|sp|B0R685|KCY_HALS3 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|10581190|gb|AAG19965.1| cytidydylate kinase [Halobacterium sp. NRC-1]
 gi|167727466|emb|CAP14254.1| cytidylate kinase [Halobacterium salinarum R1]
          Length = 192

 Score = 36.5 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 43/148 (29%), Gaps = 34/148 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++  G  G+GK+T  S L   L  ++               +  R +           
Sbjct: 1   MLVTISGPPGSGKSTVASTLADHLSYEHI-----------SGGDIFRGLAEDRD------ 43

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                +  A   +  E    P + +      DR        +  R     +    L    
Sbjct: 44  -----LTLAEFNELAEED--PQIDKD----LDR-----RLRETARGRDDIVLESRLAGWM 87

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYS 152
             E   D  I LD P+ +  +R+  R  
Sbjct: 88  AGEYA-DIKIWLDAPMSVRARRIAERED 114


>gi|329910207|ref|ZP_08275253.1| Signal recognition particle receptor protein FtsY (alpha subunit)
          [Oxalobacteraceae bacterium IMCC9480]
 gi|327546237|gb|EGF31273.1| Signal recognition particle receptor protein FtsY (alpha subunit)
          [Oxalobacteraceae bacterium IMCC9480]
          Length = 220

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + I+  G+ GAGKTT I  L + LQ     V +
Sbjct: 19 MMIT--GVNGAGKTTTIGKLAKHLQANRQSVLL 49


>gi|294495315|ref|YP_003541808.1| ABC transporter [Methanohalophilus mahii DSM 5219]
 gi|292666314|gb|ADE36163.1| ABC transporter related protein [Methanohalophilus mahii DSM 5219]
          Length = 239

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 31/98 (31%), Gaps = 19/98 (19%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVT----REPGGTPAAEAARHVLL 55
             G FI+  G  GAGK+T + +    L   +    +  T    RE         +    L
Sbjct: 29  KEGEFIAIIGPNGAGKSTLLKMFASLLSPTKGTLQIFGTKDHDREDVRDRMGMLSHETFL 88

Query: 56  SCGVDEFGAEAEAIVF----------AAARLDHVENVI 83
               D   A    + F           A R D++   I
Sbjct: 89  ---YDNLTARENLLFFGKLYGMEPVALAQRCDYLIRKI 123


>gi|253987808|ref|YP_003039164.1| ABC transporter ATP-binding protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779258|emb|CAQ82419.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 656

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTR 39
           GAGK+T I LL   L+ +  +V + +
Sbjct: 363 GAGKSTLIKLLANELKSQGGEVELAK 388


>gi|257063681|ref|YP_003143353.1| cytidylate kinase [Slackia heliotrinireducens DSM 20476]
 gi|256791334|gb|ACV22004.1| cytidylate kinase [Slackia heliotrinireducens DSM 20476]
          Length = 223

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  GAGK+T  + + R L
Sbjct: 1  MIIAIDGPSGAGKSTVATAVARRL 24


>gi|227501047|ref|ZP_03931096.1| glycerol-3-phosphate-transporting ATPase [Anaerococcus tetradius
           ATCC 35098]
 gi|227216820|gb|EEI82218.1| glycerol-3-phosphate-transporting ATPase [Anaerococcus tetradius
           ATCC 35098]
          Length = 364

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 6   FISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           F+ F G  G GK+T + +L          ++     V    EP     A   ++  L   
Sbjct: 32  FVVFVGPSGCGKSTTLRMLAGLEDISSGEIEIDGR-VINDVEPKDRNIAMVFQNYALYPH 90

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPA 86
           +  +   A A+       D ++  I  A
Sbjct: 91  MTVYDNMAYALKNQKMDKDKIKEKITKA 118


>gi|227114861|ref|ZP_03828517.1| Type I secretion ATP-binding protein [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 619

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 10/41 (24%)

Query: 7   ISFE----------GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+FE          G  G+GK+T   LL   +      V +
Sbjct: 353 ITFELAPGDVLGVLGPSGSGKSTLARLLVAAMPALGGKVRL 393


>gi|224112307|ref|XP_002316149.1| predicted protein [Populus trichocarpa]
 gi|222865189|gb|EEF02320.1| predicted protein [Populus trichocarpa]
          Length = 305

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 6/59 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I   G  G+GKTT    L ++L    Y    +    +P         R  L    +D++
Sbjct: 245 IVVVGETGSGKTTQ---LTQYLHEDGYTTNGIVGCTQPRYMTDGVLLRETLKDSDLDKY 300


>gi|239817720|ref|YP_002946630.1| ABC transporter [Variovorax paradoxus S110]
 gi|239804297|gb|ACS21364.1| ABC transporter related [Variovorax paradoxus S110]
          Length = 276

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G F++  G  G GK+T + ++   L+  +  + V R+P
Sbjct: 46 GEFVTLLGPSGCGKSTLLKMVAGMLEPSDGRLLVWRKP 83


>gi|55823225|ref|YP_141666.1| proline/glycine betaine ABC transporter ATP-binding protein
          [Streptococcus thermophilus CNRZ1066]
 gi|55739210|gb|AAV62851.1| proline/glycine betaine ABC transporter ATP-binding protein
          [Streptococcus thermophilus CNRZ1066]
          Length = 251

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + +G FI+  G  G+GKTT + ++ R ++  +  V  
Sbjct: 27 IKTGEFITILGTSGSGKTTTLKMINRLIEPSSGAVIF 63


>gi|19705324|ref|NP_602819.1| guanylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
          25586]
 gi|296329150|ref|ZP_06871652.1| guanylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
          23726]
 gi|22095793|sp|Q8RHI9|KGUA_FUSNN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|19713299|gb|AAL94118.1| Guanylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
          25586]
 gi|296153724|gb|EFG94540.1| guanylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC
          23726]
          Length = 185

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|121612644|ref|YP_001000852.1| guanylate kinase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205355919|ref|ZP_03222688.1| guanylate kinase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562789|ref|YP_002344568.1| guanylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|13431652|sp|Q9PNB8|KGUA_CAMJE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|112360495|emb|CAL35292.1| guanylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|121504186|gb|EAQ72214.2| guanylate kinase, putative [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|205346353|gb|EDZ32987.1| guanylate kinase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284926401|gb|ADC28753.1| guanylate kinase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 207

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 8/103 (7%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSC 57
           M   G  +   G  GAGK+T +  L    + + Y      TR+P          H + S 
Sbjct: 1   MKLQGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGIHYHFI-SH 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
              + G +++  +  A   ++         + AL  GKI++ D
Sbjct: 60  EEFQKGIDSDHFLEWARVHENFYGTSLKHTQNALDNGKIVVFD 102


>gi|113461600|ref|YP_719669.1| guanylate kinase [Haemophilus somnus 129PT]
 gi|112823643|gb|ABI25732.1| guanylate kinase [Haemophilus somnus 129PT]
          Length = 212

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 55/179 (30%), Gaps = 31/179 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSC 57
           M  G         GAGK++ IS L    +  +  V   H TR P          H +   
Sbjct: 5   MCRGNLYIISAPSGAGKSSLISALLERDKNDSMTVSISHTTRSPRPGEIDGVHYHFVSHE 64

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
             ++   E   + +A     +        I   L  G  +  D        +QG R    
Sbjct: 65  KFEQLILENSFLEYAKVFGGNYYGTSLLNIEKNLAAGIDVFLD------IDWQGARQ--- 115

Query: 114 HLFLDSLQEISVQEVMPDC-TIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMI 169
                      ++E  PD  +I + LP  I    KR+  R    +       E+    I
Sbjct: 116 -----------IREKRPDVKSIFI-LPPSISALEKRLIGRGQDSQDIIAKRMEKAADEI 162


>gi|323701805|ref|ZP_08113476.1| guanylate kinase [Desulfotomaculum nigrificans DSM 574]
 gi|323533341|gb|EGB23209.1| guanylate kinase [Desulfotomaculum nigrificans DSM 574]
          Length = 209

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 32/99 (32%), Gaps = 5/99 (5%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M+  GL I   G  GAGK T    L          V   TR P          + +    
Sbjct: 10  MSKQGLLIVISGPSGAGKGTICQALLERDSSFCLSVSCTTRPPRSGEKHGINYYFVGKEE 69

Query: 59  VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94
                 E + + +A    ++       +   L +G+ ++
Sbjct: 70  FQRLIDEDQLLEYAKVYDNYYGTPRQFVVEKLAQGRDVI 108


>gi|323493457|ref|ZP_08098579.1| hypothetical protein VIBR0546_14090 [Vibrio brasiliensis LMG 20546]
 gi|323312280|gb|EGA65422.1| hypothetical protein VIBR0546_14090 [Vibrio brasiliensis LMG 20546]
          Length = 182

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 36/113 (31%), Gaps = 17/113 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + F G  G+GKT+ I  L++               G   A E  R V+ +    +  A  
Sbjct: 5   VVFTGGPGSGKTSVIEFLRQM--------------GYASAPEVGRKVIQTQVESQGTALP 50

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAYQGERDSSQHLFL 117
                 A R + V   I      G   +   DR +  SY Y           L
Sbjct: 51  WLDK-TAFRDEMVLEEIDNYKNFGGTAITFYDRSIIDSYGYSKLERIPISDLL 102


>gi|313895340|ref|ZP_07828897.1| guanylate kinase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976235|gb|EFR41693.1| guanylate kinase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 199

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 47/167 (28%), Gaps = 24/167 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  GL I   G  G GK      L    +   Y V  T        + A R         
Sbjct: 1   MKKGLLIVISGASGTGKGAVCKELLSRERELAYSVSAT--------SRAPRDGEAEGREY 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F    E     AA        +              +  +  A   ER ++    L  +
Sbjct: 53  YFRTRIEFEEMIAAGAFLEYADVYGN-----------YYGTPLAPIEERRAAGEDILLEI 101

Query: 121 Q---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                ++V E  PD T I  LP   +   +R+  R +  E       
Sbjct: 102 DTQGALNVMERCPDGTFIFLLPPSFEELRRRITGRGTETEENLARRL 148


>gi|313672077|ref|YP_004050188.1| molybdopterin-guanine dinucleotide biosynthesis protein b
          [Calditerrivibrio nitroreducens DSM 19672]
 gi|312938833|gb|ADR18025.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Calditerrivibrio nitroreducens DSM 19672]
          Length = 217

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 15/25 (60%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV 35
          G  G+GKTT I  L RFL  K Y V
Sbjct: 9  GASGSGKTTFIEKLIRFLTEKGYKV 33


>gi|326774622|ref|ZP_08233887.1| Chloramphenicol phosphotransferase family protein [Streptomyces cf.
           griseus XylebKG-1]
 gi|326654955|gb|EGE39801.1| Chloramphenicol phosphotransferase family protein [Streptomyces cf.
           griseus XylebKG-1]
          Length = 189

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 23/104 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G+  AGK+T   LL   L R    VHV          +  R +++S   D    E
Sbjct: 11  LIT--GVMAAGKSTVAQLLAERLPRA---VHV--------RGDLFRRMIVSGRADMAPDE 57

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-------LLCD---RFL 99
           AE           +   +  A  +          +L D   R++
Sbjct: 58  AEEARSQLDLRQRLSAQVADAYADDGWTAVVQDIVLGDDLPRYV 101


>gi|294496157|ref|YP_003542650.1| adenylate kinase [Methanohalophilus mahii DSM 5219]
 gi|292667156|gb|ADE37005.1| Adenylate kinase [Methanohalophilus mahii DSM 5219]
          Length = 179

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 3/36 (8%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          +FI+  G  G GKT+   LL+       Y V    E
Sbjct: 1  MFIALTGTPGCGKTSVSRLLENEF---GYRVVHLNE 33


>gi|293375869|ref|ZP_06622135.1| putative ferrichrome transport ATP-binding protein FhuC
           [Turicibacter sanguinis PC909]
 gi|292645514|gb|EFF63558.1| putative ferrichrome transport ATP-binding protein FhuC
           [Turicibacter sanguinis PC909]
          Length = 251

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCG 58
           +  G   SF G  GAGK+T + ++ R L+R + +V +  +E       E A+ + +L   
Sbjct: 24  IKRGKITSFIGPNGAGKSTVLGMMSRLLKRDSGEVFIDGKELSQWKTNELAKVLAILKQS 83

Query: 59  VDEFGAEAEAIVFAAARLDH 78
                      + A  R  H
Sbjct: 84  NHLSVRLTIRDLVAFGRFPH 103


>gi|260222194|emb|CBA31514.1| High-affinity branched-chain amino acid transport ATP-binding
           protein braF [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 256

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 51/146 (34%), Gaps = 21/146 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTRE------PGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGKTT I+LL   LQ     + +  E      P         R   ++   D    
Sbjct: 39  GPNGAGKTTLINLLTGVLQPTEGRIVLEGEDITHLAPHQRVRRGMVRTFQINQLFDSMSP 98

Query: 65  EAEAIVFAAARLDH--VENVIRPALMEGKIL------LCDRFLDSSYAYQGERDSSQHLF 116
                +  +    H  +      AL   + +      L ++F  SS  +Q  R  +    
Sbjct: 99  MQTLAMVVS---QHKGLGGKWWQALGADRSVVERCEQLLEQFHLSSVMHQETRVLAYGK- 154

Query: 117 LDSLQEISVQ-EVMPDCTIILDLPVD 141
              L EI++     P   ++LD PV 
Sbjct: 155 -RRLLEIAIALACEP-RVLLLDEPVA 178


>gi|256848024|ref|ZP_05553468.1| lipid A export permease/ATP-binding protein MsbA [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715084|gb|EEU30061.1| lipid A export permease/ATP-binding protein MsbA [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 612

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 28/150 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--------TREPGGTPAAEAARHVL 54
               ++  G  GAGKTT I+LL+RF       V+          RE          +   
Sbjct: 394 RNKMVAIVGPTGAGKTTIINLLERFYDVDGGHVYYNGQDTRSMMREDLRKHVGMVLQDTW 453

Query: 55  LSCGV------DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
           L  G              +  V+ AARL + ++ IR  L  G   + D    S+ + QG+
Sbjct: 454 LFTGTIFENIKYGRNDATDEEVYEAARLAYADSFIRE-LPNGYDTILDE-TASNIS-QGQ 510

Query: 109 RDSSQHLFLDSLQEISVQEVM-PDCTIILD 137
           R          L  I+   +  PD  +ILD
Sbjct: 511 R---------QLLTIARAFLADPDI-LILD 530


>gi|229016778|ref|ZP_04173708.1| Adenylyl-sulfate kinase [Bacillus cereus AH1273]
 gi|229022983|ref|ZP_04179500.1| Adenylyl-sulfate kinase [Bacillus cereus AH1272]
 gi|228738289|gb|EEL88768.1| Adenylyl-sulfate kinase [Bacillus cereus AH1272]
 gi|228744514|gb|EEL94586.1| Adenylyl-sulfate kinase [Bacillus cereus AH1273]
          Length = 197

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 73/210 (34%), Gaps = 47/210 (22%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F+  F G+  +GK+T  + + R L  KN                   + +L       G 
Sbjct: 26  FVVWFTGLSASGKSTVANAVARKLFEKNIG-----------------NYVLDGDNIRQGL 68

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +     + R++++     V +  + +G ++L         A+       +    D L 
Sbjct: 69  NKDLGFSESDRMENIRRIGEVAKLFVDQGTVVLT--------AFISPFRVDRKQVRDLL- 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+ + +     + +  P++   KR   +   +++   D  E   +         + +  
Sbjct: 120 -IADEFIE----VFVKCPIEECEKR-DPKGLYKKARKGDIKEFTGID------SPYEEPK 167

Query: 182 RNQPDRCHIVDSAH-SFQSVATNILNIVWE 210
           + +     IV++   S +  A  I+  + E
Sbjct: 168 QAE----LIVETHKYSIEECAEQIVKYLQE 193


>gi|224371918|ref|YP_002606084.1| LivF6 [Desulfobacterium autotrophicum HRM2]
 gi|223694637|gb|ACN17920.1| LivF6 [Desulfobacterium autotrophicum HRM2]
          Length = 237

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 30/159 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARH-VLLSCG 58
           ++ G  +   G  GAGK+T +  +   LQ  +       R+      A+  R  ++    
Sbjct: 27  LDKGEIVCIIGPNGAGKSTVLRTVAGQLQPSRGTMAFKGRDLTCLSIAQRGRKGLIFIPQ 86

Query: 59  VDEFGAEAEAI--------VFAAARL--DHVENVIR--PALMEGKILLCDRFLDSSYAYQ 106
                     I        +   +R     V+ +++  P L + K               
Sbjct: 87  GMNIFPNLTVIENLEIAGALMKDSRALNAAVKEILQHYPMLDKKK--------------N 132

Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145
               +        L     + + PD   +LD    +GL 
Sbjct: 133 AFGRTLSGGERQVLALSRTRMLKPDLV-LLD-EPSLGLA 169


>gi|210615850|ref|ZP_03290812.1| hypothetical protein CLONEX_03030 [Clostridium nexile DSM 1787]
 gi|210150053|gb|EEA81062.1| hypothetical protein CLONEX_03030 [Clostridium nexile DSM 1787]
          Length = 261

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          +  G FIS  G  G GK+T +SL+   L
Sbjct: 37 LKKGEFISIVGPSGCGKSTLLSLIAGLL 64


>gi|153010898|ref|YP_001372112.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
 gi|151562786|gb|ABS16283.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
          Length = 378

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++  G  G+GKTT + L+ 
Sbjct: 41 LAKGRFLTILGPSGSGKTTLLRLIA 65


>gi|170718696|ref|YP_001783888.1| guanylate kinase [Haemophilus somnus 2336]
 gi|119371226|sp|Q0I5L8|KGUA_HAES1 RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|168826825|gb|ACA32196.1| Guanylate kinase [Haemophilus somnus 2336]
          Length = 208

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 55/179 (30%), Gaps = 31/179 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSC 57
           M  G         GAGK++ IS L    +  +  V   H TR P          H +   
Sbjct: 1   MCRGNLYIISAPSGAGKSSLISALLERDKNDSMTVSISHTTRSPRPGEIDGVHYHFVSHE 60

Query: 58  GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
             ++   E   + +A     +        I   L  G  +  D        +QG R    
Sbjct: 61  KFEQLILENSFLEYAKVFGGNYYGTSLLNIEKNLAAGIDVFLD------IDWQGARQ--- 111

Query: 114 HLFLDSLQEISVQEVMPDC-TIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMI 169
                      ++E  PD  +I + LP  I    KR+  R    +       E+    I
Sbjct: 112 -----------IREKRPDVKSIFI-LPPSISALEKRLIGRGQDSQDIIAKRMEKAADEI 158


>gi|21232720|ref|NP_638637.1| adenylate kinase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66767205|ref|YP_241967.1| adenylate kinase [Xanthomonas campestris pv. campestris str. 8004]
 gi|24418464|sp|Q8P5P5|KAD_XANCP RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|81306812|sp|Q4UYC6|KAD_XANC8 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|21114533|gb|AAM42561.1| adenylate kinase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572537|gb|AAY47947.1| adenylate kinase [Xanthomonas campestris pv. campestris str. 8004]
          Length = 187

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T +       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQAARLKD-----------TFQIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  + + +   G   +      ++L  +  + 
Sbjct: 52  ----VMARGDLVSDEILLGMLEARLGQAD--VANGFILDGYPRNVAQA--NALDSLLSKI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLARVDGVGSLDEVLERIGQAL 185


>gi|297170721|gb|ADI21744.1| 5-enolpyruvylshikimate-3-phosphate synthase [uncultured
           actinobacterium HF0130_15N16]
          Length = 647

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           I+ +G  G+GK+T    L R L+  N+D
Sbjct: 437 IAIDGPAGSGKSTVAKQLARELRLPNFD 464


>gi|307944733|ref|ZP_07660071.1| nitrate ABC transporter, ATPase subunits C and D [Roseibium sp.
           TrichSKD4]
 gi|307771947|gb|EFO31170.1| nitrate ABC transporter, ATPase subunits C and D [Roseibium sp.
           TrichSKD4]
          Length = 550

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK 25
           MN G FI+  G  G GK+T +S++ 
Sbjct: 328 MNKGEFITLIGHSGCGKSTVLSMVA 352


>gi|291524656|emb|CBK90243.1| Shikimate kinase [Eubacterium rectale DSM 17629]
          Length = 182

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M++G+ I   G  G+GKTT   ++ + L    +DV
Sbjct: 1  MSTGIMII--GPSGSGKTTLGKIVAQKLGYLYFDV 33


>gi|291415313|ref|XP_002723897.1| PREDICTED: guanylate kinase 1-like [Oryctolagus cuniculus]
          Length = 219

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 37/169 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55
           M+    +   G  GAGK+T   LL+R LQ       + V H TR+P   P  E  R    
Sbjct: 22  MSGPRPVVLSGPSGAGKST---LLRRLLQEHGGVFGFSVSHTTRDP--RPGEENGRDYYF 76

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                              R     + I  A   G +     +  S  A Q  +  ++  
Sbjct: 77  VTRE------------VMQRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRIC 119

Query: 116 FLDS----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESA 157
            LD     ++ I   ++ P   I + +     D+  +R++ R +  E +
Sbjct: 120 VLDVDLQGVRNIKKTDLRP---IYISVQPPSLDVLEQRLRQRNTETEES 165


>gi|257417238|ref|ZP_05594232.1| ABC transporter [Enterococcus faecalis AR01/DG]
 gi|257159066|gb|EEU89026.1| ABC transporter [Enterococcus faecalis ARO1/DG]
          Length = 233

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G  ISF G  GAGK+T + ++ 
Sbjct: 30 IDKGKLISFVGPNGAGKSTLLKIIA 54


>gi|237750758|ref|ZP_04581238.1| signal recognition particle protein [Helicobacter bilis ATCC 43879]
 gi|229373848|gb|EEO24239.1| signal recognition particle protein [Helicobacter bilis ATCC 43879]
          Length = 443

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++G+GKTT  + L  +L+ +N  V + 
Sbjct: 101 GLQGSGKTTTCAKLANYLKARNKKVLLV 128


>gi|156362114|ref|XP_001625626.1| predicted protein [Nematostella vectensis]
 gi|156212468|gb|EDO33526.1| predicted protein [Nematostella vectensis]
          Length = 613

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +G  ++  G  G+GK+T + LL RF   +   V V  +     + E+ R V+
Sbjct: 358 AGKKVAIVGGSGSGKSTIVRLLFRFFDPQGGRVLVAGQDIRDFSLESLRKVV 409


>gi|126309917|ref|XP_001378792.1| PREDICTED: similar to guanylate kinase [Monodelphis domestica]
          Length = 198

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 31/171 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M     +   G  GAGK+T +  LL+ +     + V H TR P              +  
Sbjct: 1   MTGPRPVVLSGPSGAGKSTLLKKLLQEYGNIFGFSVSHTTRNPRPGEE---------NGK 51

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE----RDSSQH 114
              F    E       R       I  A   G +     +  S  A Q      R     
Sbjct: 52  DYHFVTREE-----MQRDIDAGKFIEHAEFSGNM-----YGTSKAAVQAVQVMNRICVLD 101

Query: 115 LFLDSLQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYF 162
           + L  ++ I   E+ P   I + +    +DI  KR+++R +  E +     
Sbjct: 102 IDLQGVRNIKKMELRP---IYISIQAPSLDILEKRLRDRKTETEESLQKRL 149


>gi|58617336|ref|YP_196535.1| adenylate kinase [Ehrlichia ruminantium str. Gardel]
 gi|58416948|emb|CAI28061.1| Adenylate kinase [Ehrlichia ruminantium str. Gardel]
          Length = 220

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 156 SACLD-YFERKDVMIHEKRRQIFLDIARNQ---PDRCHIVDSAHSFQSVATNILNIVWEL 211
              LD  ++ K  +I ++  Q + ++   +    D+   +D+  S   V  +I   +  L
Sbjct: 158 KGRLDYRYDDKIEVIVKRVNQYYEEMKDLELYYHDKIIQIDAGKSIDKVTQDIKVRIEYL 217

Query: 212 V 212
           +
Sbjct: 218 I 218


>gi|15965973|ref|NP_386326.1| ABC transporter ATP-binding protein [Sinorhizobium meliloti 1021]
 gi|307308284|ref|ZP_07587993.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
 gi|307319752|ref|ZP_07599177.1| ABC transporter related protein [Sinorhizobium meliloti AK83]
 gi|15075243|emb|CAC46799.1| Putative ATP-binding ABC transporter [Sinorhizobium meliloti 1021]
 gi|306894683|gb|EFN25444.1| ABC transporter related protein [Sinorhizobium meliloti AK83]
 gi|306901282|gb|EFN31888.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
          Length = 353

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 26/167 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEAARHVL 54
           ++ G F+SF G  G GKTT + ++  F       + +        +P         +   
Sbjct: 26  IDKGEFVSFLGPSGCGKTTILRMIAGFETPSGGSIFIDGKDQGALKPNQRNIGMVFQAYA 85

Query: 55  LSCGVDEFGAEAEAIVFA-AARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           L   ++     A  +  A A+R +    V+ ++    +E    L DRF      YQ    
Sbjct: 86  LFPNMNVHDNVAFGLKVAGASRTEIEARVKQMLGLIKLEH---LADRFP-----YQLSGG 137

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRE 155
             Q + L          V P   ++LD  L       R+  R  +R+
Sbjct: 138 QQQRVALAR-----ALAVKPQ-VLLLDEPLSALDAKIRISLREEIRQ 178


>gi|108804577|ref|YP_644514.1| daunorubicin resistance ABC transporter ATP-binding subunit
           [Rubrobacter xylanophilus DSM 9941]
 gi|108765820|gb|ABG04702.1| daunorubicin resistance ABC transporter ATP-binding subunit
           [Rubrobacter xylanophilus DSM 9941]
          Length = 319

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 70/214 (32%), Gaps = 39/214 (18%)

Query: 9   FEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGT--PAAEAARHVLLSCGV 59
           F G  GAGKTT + +L   L            DV   REPG        A +   L    
Sbjct: 38  FLGPNGAGKTTTVRMLVTLLAPTEGRAWVAGRDVV--REPGAVRLRIGVALQEAALDARQ 95

Query: 60  DEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHL 115
                   +  ++  +R + ++  I  + + G I + +   R + S   Y G       L
Sbjct: 96  TGIEILRLQGRLYGLSRRE-IDERI--SQLRGLIDIGEALGRRVGS---YSGGMRRRLDL 149

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
               +             + LD     GL  V       E   L+      V I    + 
Sbjct: 150 AAALIHNPE--------VLFLD-EPTTGLDPVSRAKVWEEVRRLNR--ELGVTIFLTTQ- 197

Query: 176 IFLDIARNQPDRCHIVD-----SAHSFQSVATNI 204
            +L+ A    DR  I+D     +  + + +  ++
Sbjct: 198 -YLEEADRLADRVGIIDRGRLVAEGTPEELKRSV 230


>gi|297172827|gb|ADI23790.1| Adenylylsulfate kinase and related kinases [uncultured gamma
           proteobacterium HF4000_47G05]
          Length = 186

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|312135437|ref|YP_004002775.1| ABC transporter-like protein [Caldicellulosiruptor owensensis OL]
 gi|311775488|gb|ADQ04975.1| ABC transporter related protein [Caldicellulosiruptor owensensis
          OL]
          Length = 278

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARH 52
           G F++  G+ G+GK+T   L+   L  +  DV V       T      R 
Sbjct: 34 RGEFVAILGLNGSGKSTLAKLINGLLIPEKGDVIVDGMNTKDTEKIWDIRR 84


>gi|303240684|ref|ZP_07327198.1| ABC transporter related protein [Acetivibrio cellulolyticus CD2]
 gi|302591752|gb|EFL61486.1| ABC transporter related protein [Acetivibrio cellulolyticus CD2]
          Length = 503

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRF-LQRKNY 33
            G F++F G  G GKTT + ++  F L  + +
Sbjct: 33 KKGEFVTFLGPSGCGKTTTLRMIAGFELPSEGH 65


>gi|269218470|ref|ZP_06162324.1| prephenate dehydrogenase [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211581|gb|EEZ77921.1| prephenate dehydrogenase [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 610

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL 28
           G+ I+ +G  G+GK+T    +   L
Sbjct: 389 GVVIALDGPSGSGKSTVSKKVAERL 413


>gi|255530069|ref|YP_003090441.1| LAO/AO transport system ATPase [Pedobacter heparinus DSM 2366]
 gi|255343053|gb|ACU02379.1| LAO/AO transport system ATPase [Pedobacter heparinus DSM 2366]
          Length = 296

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 6/55 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH------VTREPGGTPAAEAARHVLL 55
           I   G  GAGK+T ++ +   L ++   V        +    G+   +  R   L
Sbjct: 49  IGITGPPGAGKSTLVNAVTAALVKQGKKVAILAIDPTSPFNFGSLLGDRIRMAQL 103


>gi|190890168|ref|YP_001976710.1| pantothenate kinase protein [Rhizobium etli CIAT 652]
 gi|190695447|gb|ACE89532.1| pantothenate kinase protein [Rhizobium etli CIAT 652]
          Length = 210

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
            I+  G  GAGK+T    L   L+ K   V
Sbjct: 22 FLIAIAGPPGAGKSTMADNLADALKAKGESV 52


>gi|190346479|gb|EDK38576.2| hypothetical protein PGUG_02674 [Meyerozyma guilliermondii ATCC
          6260]
          Length = 186

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 7  ISFEGIEGAGKTTHIS-LLKRFLQRKNYDV-HVTREPGGTP 45
          I   G  G GK+T +  LL  +  +  + V H TR P    
Sbjct: 6  IVISGPSGTGKSTLLKRLLAEYPDKFGFSVSHTTRSPRDGE 46


>gi|45659248|ref|YP_003334.1| ABC transporter ATP-binding protein [Leptospira interrogans
          serovar Copenhageni str. Fiocruz L1-130]
 gi|45602494|gb|AAS71971.1| ABC Transporter, ATP-binding protein [Leptospira interrogans
          serovar Copenhageni str. Fiocruz L1-130]
          Length = 315

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G F++  G  GAGKTT I +L+
Sbjct: 37 IHKGEFVALLGPNGAGKTTLIEMLE 61


>gi|20095115|ref|NP_614962.1| nucletide kinase [Methanopyrus kandleri AV19]
 gi|74558787|sp|Q8TUS5|PSTK_METKA RecName: Full=L-seryl-tRNA(Sec) kinase; AltName:
           Full=O-phosphoseryl-tRNA(Sec) kinase; Short=PSTK
 gi|19888410|gb|AAM02892.1| Predicted nucletide kinase [Methanopyrus kandleri AV19]
          Length = 255

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 71/209 (33%), Gaps = 52/209 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKT     L R L+++ + V           A+A R  L     DEF  + E + 
Sbjct: 8   GPPGSGKTCFARELARELRQEGWRVAHVE-------ADALRGFL----WDEFDPKLEQVA 56

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
                 +     +   L     +++ D   D++Y Y   R     L   +L+      + 
Sbjct: 57  -----RELFLKSVETCLDAELDLVIAD---DTNY-YSSMRRELALL---ALERKVPWGI- 103

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC- 188
               + L   +D  L+R + R                       R+I+      +PDR  
Sbjct: 104 ----VYLRTGLDTCLRRNRERGEPIPEEV--------------VRRIYDRFEPPEPDRWW 145

Query: 189 ----HIVDSAHSFQSVATNILNIVWELVQ 213
                ++D +     V+  +L  V   ++
Sbjct: 146 ERATLVLDDSR----VSEEVLEFVESGLR 170


>gi|268566289|ref|XP_002639683.1| C. briggsae CBR-GEI-11 protein [Caenorhabditis briggsae]
          Length = 901

 Score = 36.5 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 147 VQNRYSLRESACLDYFERKDVMIHEKR-----RQIFLDIARNQPD---RCHIVDSAHSFQ 198
           +    S R +   D  +++D    EK      ++I+  +A++ PD   R  ++ S   ++
Sbjct: 471 IDAMKSGRRAPGEDELDQEDKEEAEKIPNAIMKEIYEKLAKDNPDAAARIRVLKSTPGYK 530

Query: 199 SVATNILNIVWE 210
           +V  +I  IV +
Sbjct: 531 AVENHINEIVKK 542


>gi|326571081|gb|EGE21105.1| polyphosphate kinase 2 [Moraxella catarrhalis BC7]
          Length = 368

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 144 IIFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTEQERGQW----------------- 186

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 187 ----YFQRYVQHLPT-------AGEIVLFDRSWY 209


>gi|322370128|ref|ZP_08044690.1| ATPase [Haladaptatus paucihalophilus DX253]
 gi|320550464|gb|EFW92116.1| ATPase [Haladaptatus paucihalophilus DX253]
          Length = 610

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ IS  G  GAGK+T    +  FL   ++ V    +P              +    E
Sbjct: 260 QRGVLIS--GAPGAGKSTFAQAVAEFLADNDFAVKTMEKPRDLQVGPEVTQY--TELAGE 315

Query: 62  FGAEAEAIVF 71
               A++++ 
Sbjct: 316 MEKTADSLLM 325


>gi|313836331|gb|EFS74045.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL037PA2]
 gi|314928795|gb|EFS92626.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL044PA1]
 gi|314971169|gb|EFT15267.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL037PA3]
 gi|328906456|gb|EGG26231.1| ABC transporter, ATP-binding protein [Propionibacterium sp. P08]
          Length = 326

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 62/207 (29%), Gaps = 37/207 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGKTT + ++   L   +  +         P +                   E   
Sbjct: 50  GPNGAGKTTLVRIIAGLLSADSGTIEWPGNESRNPRSLLGYVSQKGGLQYGLTCREEMTF 109

Query: 71  F----------AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                      AA R++ V  ++    +    +  DR         G +     + +  L
Sbjct: 110 HVRCFGLGDREAARRVERVTEMLHCGYLLDWNV--DR-------LSGGQRRVVEVGMALL 160

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
            E +         I+LD    +GL     R SL E+      E  D          ++D 
Sbjct: 161 HEPA--------VILLD-EPTLGLD-PATRLSLWETVGSARRES-DAAFL--VTTHYIDE 207

Query: 181 ARNQPDRCHIVD-----SAHSFQSVAT 202
              Q     +++     ++ + + + +
Sbjct: 208 VAQQLSNVSVINHGTVIASGTPEELQS 234


>gi|312870297|ref|ZP_07730425.1| excinuclease ABC, A subunit [Lactobacillus oris PB013-T2-3]
 gi|311094181|gb|EFQ52497.1| excinuclease ABC, A subunit [Lactobacillus oris PB013-T2-3]
          Length = 954

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 19/31 (61%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           G FI   G+ G+GK+T ++L+ + +  +  +
Sbjct: 632 GKFICVTGVSGSGKSTLVNLILKRILAQKLN 662


>gi|288553857|ref|YP_003425792.1| putative ABC transporter ATP-binding protein [Bacillus
          pseudofirmus OF4]
 gi|288545017|gb|ADC48900.1| putative ABC transporter component, ATP-binding protein [Bacillus
          pseudofirmus OF4]
          Length = 258

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +G FIS  G  G GKTT +SL+   L+
Sbjct: 32 NGEFISILGPSGCGKTTLLSLVAGILK 58


>gi|271969776|ref|YP_003343972.1| adenylylsulfate kinase and related kinase-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270512951|gb|ACZ91229.1| Adenylylsulfate kinase and related kinase-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 409

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 6/53 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
             GL + F G+ G+GK+T    L+  L  +                +  RH+L
Sbjct: 231 RRGLVVFFTGLSGSGKSTVARGLRDALLERGSRTIT------YLDGDVVRHLL 277


>gi|269792391|ref|YP_003317295.1| cytidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100026|gb|ACZ19013.1| cytidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 223

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 73/239 (30%), Gaps = 42/239 (17%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +  +G  G+GK+T   LL R L         T            R V        
Sbjct: 3   RRGPVVVLDGPAGSGKSTVAKLLARAL---GVPHLDT--------GAIYRAVAYHMDSKG 51

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLD 118
              E   ++     +  VE       + G+ +   +    +DS  ++     + +   L 
Sbjct: 52  IPPEDSELLLRELEVTRVEVSQGFVRVNGEDVTREIRTPHVDSIVSHYAAIPAVRRALLG 111

Query: 119 SLQEISVQEVMP---DC--TIILDLPVDIGL-----KRVQNRYSLRESACLDYFERKDVM 168
             +E +   ++    D    +  D  V + L     +R + R+  R S        +D  
Sbjct: 112 LQREQARDGIVAEGRDMASVVFPDADVKVFLTASPEERARRRHLERLSKG------EDSD 165

Query: 169 IHEKRRQIFLDIARNQPDR----------CHIVDSAH-SFQSVATNILNIVWELVQKRV 216
             +  RQ+  +  R    R            + D+   S   V   +   V   +  RV
Sbjct: 166 YQQVLRQV-EERDRLDSQRECSPLKVDEGALVFDTTGLSVDEVVLALEKEVRSRLVGRV 223


>gi|254464841|ref|ZP_05078252.1| ferric cations import ATP-binding protein FbpC [Rhodobacterales
          bacterium Y4I]
 gi|206685749|gb|EDZ46231.1| ferric cations import ATP-binding protein FbpC [Rhodobacterales
          bacterium Y4I]
          Length = 370

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +N G F SF G  G GKTT +  +  FL+     V +
Sbjct: 29 INGGDFFSFLGPSGCGKTTILRAVSGFLEPSGGRVLI 65


>gi|189219526|ref|YP_001940167.1| ABC-type multidrug transport system, ATPase component
          [Methylacidiphilum infernorum V4]
 gi|189186384|gb|ACD83569.1| ABC-type multidrug transport system, ATPase component
          [Methylacidiphilum infernorum V4]
          Length = 580

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 4/30 (13%)

Query: 1  MNSGLF--ISFEGIEGAGKTTHISLLKRFL 28
          M  G    I   G +GAGKTT + LL   L
Sbjct: 34 MEPGKITGIV--GPDGAGKTTLLRLLAGML 61


>gi|163800969|ref|ZP_02194869.1| hypothetical protein 1103602000593_AND4_01863 [Vibrio sp. AND4]
 gi|159175318|gb|EDP60115.1| hypothetical protein AND4_01863 [Vibrio sp. AND4]
          Length = 156

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M++       G+ G+GKTT    L + L+ K+++  +  E 
Sbjct: 28 MSNVKLFLIRGLPGSGKTTLAKKLSKQLKAKHFEADMYFEN 68


>gi|149275928|ref|ZP_01882073.1| ABC-type multidrug transporter, ATP-binding protein; gliding
           motility-associated protein [Pedobacter sp. BAL39]
 gi|149233356|gb|EDM38730.1| ABC-type multidrug transporter, ATP-binding protein; gliding
           motility-associated protein [Pedobacter sp. BAL39]
          Length = 235

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 15/92 (16%)

Query: 7   ISFE----------GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-- 54
           I+FE          G  GAGK+T + +L  +L+  +    +      T + E  R V+  
Sbjct: 21  ITFEARPGRILGFLGPNGAGKSTTMRMLTGYLKPSSGTASLCGFDTQTQSLE-LRKVMGY 79

Query: 55  LSCGVDEFGAEA--EAIVFAAARLDHVENVIR 84
           L      +      E ++F A      +   +
Sbjct: 80  LPENTPLYADMYVKEFLLFVANTYQLQDPKQK 111


>gi|116254134|ref|YP_769972.1| ATP-binding component of ABC transporter [Rhizobium leguminosarum
          bv. viciae 3841]
 gi|115258782|emb|CAK09888.1| putative ATP-binding component of ABC transporter [Rhizobium
          leguminosarum bv. viciae 3841]
          Length = 270

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG F+S  G  G+GK+T + LL + L+
Sbjct: 30 SGEFVSIVGPSGSGKSTVLRLLTQALR 56


>gi|78486174|ref|YP_392099.1| hypothetical protein Tcr_1833 [Thiomicrospira crunogena XCL-2]
 gi|78364460|gb|ABB42425.1| Conserved hypothetical protein with DUF344 [Thiomicrospira
           crunogena XCL-2]
          Length = 263

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 33/123 (26%), Gaps = 31/123 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I  +   L  +   V    +P  T   +                  
Sbjct: 49  ILFEGRDAAGKGGTIKRIMEHLNPRGARVVALDKPSETEKGQW----------------- 91

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +    + H+          G+++L DR   S Y   G              +   Q
Sbjct: 92  ----YFQRYVQHLPT-------AGEMVLFDR---SWYNRAGVERVMGFCTPPQYNQFVHQ 137

Query: 127 EVM 129
              
Sbjct: 138 APE 140


>gi|114046409|ref|YP_736959.1| adenylylsulfate kinase [Shewanella sp. MR-7]
 gi|123326820|sp|Q0HYA3|CYSC_SHESR RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|113887851|gb|ABI41902.1| adenylylsulfate kinase [Shewanella sp. MR-7]
          Length = 205

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+R L    +  +                 LL       G   + 
Sbjct: 29  FTGLSGAGKSTLAGALERALFDAGFHTY-----------------LLDGDNVRHGLCKDL 71

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 72  GFSVADRDENLRRVGEVAKLMVDAGLVVLS 101


>gi|329937079|ref|ZP_08286708.1| ABC transporter [Streptomyces griseoaurantiacus M045]
 gi|329303686|gb|EGG47571.1| ABC transporter [Streptomyces griseoaurantiacus M045]
          Length = 542

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
          G+ G+GK+T + LL   L      V VT E G  P
Sbjct: 37 GVNGSGKSTLLKLLAGELTPSGGTVRVTGELGYLP 71


>gi|314968513|gb|EFT12611.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL037PA1]
          Length = 261

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V   RE  G         +    S     
Sbjct: 38  GPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRREGSGYRAHIGYVPQECTWSPSWP- 96

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D  +   +A+Q     S         
Sbjct: 97  ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSDLNV-GQFAHQPIGTLSGGQKRRVFL 149

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 150 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 186


>gi|313763596|gb|EFS34960.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL013PA1]
 gi|313793990|gb|EFS42014.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL110PA1]
 gi|313801377|gb|EFS42628.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL110PA2]
 gi|313816776|gb|EFS54490.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL059PA1]
 gi|313822163|gb|EFS59877.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL036PA1]
 gi|314914750|gb|EFS78581.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL005PA4]
 gi|314920802|gb|EFS84633.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL050PA3]
 gi|314924653|gb|EFS88484.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL036PA3]
 gi|314930480|gb|EFS94311.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL067PA1]
 gi|314957453|gb|EFT01556.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL002PA1]
 gi|314978826|gb|EFT22920.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL072PA2]
 gi|315083460|gb|EFT55436.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL027PA2]
 gi|315087146|gb|EFT59122.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL002PA3]
 gi|315089317|gb|EFT61293.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL072PA1]
 gi|315099224|gb|EFT71200.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL059PA2]
 gi|315106782|gb|EFT78758.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL030PA1]
 gi|315109021|gb|EFT80997.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL030PA2]
 gi|327329737|gb|EGE71493.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL096PA3]
 gi|327334255|gb|EGE75969.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL097PA1]
 gi|327446422|gb|EGE93076.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL013PA2]
 gi|327454975|gb|EGF01630.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL087PA3]
 gi|328752178|gb|EGF65794.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL020PA1]
 gi|328758329|gb|EGF71945.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL025PA2]
          Length = 261

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V   RE  G         +    S     
Sbjct: 38  GPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRREGSGYRAHIGYVPQECTWSPSWP- 96

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D  +   +A+Q     S         
Sbjct: 97  ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSDLNV-GQFAHQPIGTLSGGQKRRVFL 149

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 150 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 186


>gi|256061292|ref|ZP_05451442.1| adenylate kinase [Brucella neotomae 5K33]
 gi|261325299|ref|ZP_05964496.1| adenylate kinase [Brucella neotomae 5K33]
 gi|261301279|gb|EEY04776.1| adenylate kinase [Brucella neotomae 5K33]
          Length = 194

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 49/216 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   LL    ++       T         +  R  +      E G  A+A++
Sbjct: 7   GPPGAGKGTQAGLLT---KKHGIPQLST--------GDMLRAAV--AQQSEIGKRAKAVM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV----Q 126
                   V + I         ++ +R +D+     G         +   Q +S     +
Sbjct: 54  ---DAGQLVSDEIVNQ------IVSER-IDAPECANGFILDGYPRTVPQAQALSQMLSGK 103

Query: 127 EVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEKR----- 173
            +  D  I L +  +  +KR+++R          +R     + F ++ V   EK      
Sbjct: 104 GLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSS 163

Query: 174 -RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                 ++         +++     + V   I  I+
Sbjct: 164 YYAGTGEL--------RVINGMAPVEEVTAEIERIL 191


>gi|225468099|ref|XP_002266090.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296088830|emb|CBI38288.3| unnamed protein product [Vitis vinifera]
          Length = 268

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L +  +     +H+       E    P A   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSSLYQHCETMRRTIHIVNLDPAAESFDYPVAMDIRELVSLDDVMEELGL 68

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
               +     ++H+E  +   L +
Sbjct: 69 GPNGGLMYC--MEHLEENLDDWLTD 91


>gi|188535981|ref|YP_001911093.1| TraD protein [Erwinia tasmaniensis Et1/99]
 gi|188027147|emb|CAO94971.1| TraD protein [Erwinia tasmaniensis Et1/99]
          Length = 788

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSCGV 59
           G GK+T I  L  +++++     V  +PGGT       A R  +L    
Sbjct: 202 GTGKSTIIRYLLDYIRKRGDRFIV-FDPGGTFIKTHFNARRDFILDPHD 249


>gi|197294840|ref|YP_001799381.1| Signal recognition particle-docking protein [Candidatus Phytoplasma
           australiense]
 gi|171854167|emb|CAM12161.1| Signal recognition particle-docking protein [Candidatus Phytoplasma
           australiense]
          Length = 331

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA-EAI 69
           G+ G GKTT I  +   L+++   V +    G T  A A   + +     +    A E  
Sbjct: 128 GVNGVGKTTTIGKMATKLRQEGKKVLLVA--GDTFRAGAVEQLKIWGNWSQTEVFAKEGT 185

Query: 70  VFAAARLDHVENVIRPALMEGKILLCD 96
           +F +      E +         ++LCD
Sbjct: 186 LFPSPSSVIFEGLQYAKKNAYDVVLCD 212


>gi|118085481|ref|XP_425960.2| PREDICTED: similar to Guk1 protein isoform 2 [Gallus gallus]
          Length = 213

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 39/222 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M     +   G  GAGK+T I  L K +     + V H TR+P          H +    
Sbjct: 16  MQGPRPVVLSGPSGAGKSTLIKKLFKDYENIFGFSVSHTTRQPRPGEVNGKDYHFVTREE 75

Query: 59  VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           + +     E I    F+       +  ++    + +I + D                  +
Sbjct: 76  MKKEIDAGEFIEHAEFSGNMYGTSKGAVQAVQAKNQICILD------------------I 117

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            +  ++ I   ++ P   I + +     D+  KR+++R +  E +         V     
Sbjct: 118 DIQGVKNIKKTDLNP---IYISVQPPSIDVLEKRLRDRQTETEESLQKRLTAARVD---- 170

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
                L++++ +P    +V      +   + +   + + +QK
Sbjct: 171 -----LELSK-EPGLFDLVIINDDLEKAYSELKEQLLKEIQK 206


>gi|108757307|ref|YP_630870.1| hypothetical protein MXAN_2651 [Myxococcus xanthus DK 1622]
 gi|108461187|gb|ABF86372.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 242

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + +GK   I  L   +  + Y V     P  +P+ E  RH  L     +     
Sbjct: 54  IVFEGWDASGKGGAIRRLTTLMDPRGYKV----WPISSPSEEERRHHYLWRFWRKTPGAG 109

Query: 67  EAIVF 71
           E  +F
Sbjct: 110 EVCMF 114


>gi|94970248|ref|YP_592296.1| cytidylate kinase [Candidatus Koribacter versatilis Ellin345]
 gi|94552298|gb|ABF42222.1| cytidylate kinase [Candidatus Koribacter versatilis Ellin345]
          Length = 227

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 79/242 (32%), Gaps = 65/242 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T  S L R L    Y   V  E G    A A + +        F   A
Sbjct: 9   IAIDGPAGAGKSTIASRLARKL---GY---VNLESGAMYRALALKAI---ENDVSFDDSA 59

Query: 67  EAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDS------------------------ 101
             + +  ++R++    +      +G  +L D    S                        
Sbjct: 60  SLLRLAESSRIELQPQI------DGNRVLLDGQNVSRRIRERDVTEGASRVSVHPPVREW 113

Query: 102 SYAYQGERDSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACL 159
             A Q E   +  + ++  ++I    V P  D  I LD    +  +R   + + +     
Sbjct: 114 MVARQREMGVNGGVIMEG-RDIGT-AVFPDADLKIFLDADPTVRAERRIEQNAAKNDEAA 171

Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRC----------HIVDSAH-SFQSVATNILNIV 208
               R+D+          L   +    R            ++DS+    + V T I  ++
Sbjct: 172 AKALREDL----------LRRDQRDTTRTASPLVPAADAIVLDSSKLGIEEVLTRIEQLI 221

Query: 209 WE 210
            E
Sbjct: 222 AE 223


>gi|39976891|ref|XP_369833.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145016250|gb|EDK00740.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 208

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 50/147 (34%), Gaps = 24/147 (16%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I F G+  +GK+T  + L++ L       +                  L      
Sbjct: 22  QRGFTIWFTGLSASGKSTVATALEQHLLHLGLAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           FG   +       R +++  +   A      L  D  + +  ++     + +    +   
Sbjct: 65  FGLNKDLGFSEKDRNENIRRIAEVAK-----LFADSSVVALTSFISPYRADRQTARELHA 119

Query: 122 EISVQEVMP-DCT-IILDLPVDIGLKR 146
           + + +   P +   + +D+P+++  +R
Sbjct: 120 QAAQKGDEPLEFVEVYVDIPIEVAEQR 146


>gi|50842970|ref|YP_056197.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           KPA171202]
 gi|50840572|gb|AAT83239.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           KPA171202]
          Length = 260

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V   RE  G         +    S     
Sbjct: 37  GPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRREGSGYRAHIGYVPQECTWSPSWP- 95

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D  +   +A+Q     S         
Sbjct: 96  ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSDLNV-GQFAHQPIGTLSGGQKRRVFL 148

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 149 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 185


>gi|66799701|ref|XP_628776.1| hypothetical protein DDB_G0294238 [Dictyostelium discoideum AX4]
 gi|60462123|gb|EAL60363.1| hypothetical protein DDB_G0294238 [Dictyostelium discoideum AX4]
          Length = 229

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 6/50 (12%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAA 50
            I+  G  G+GKTT ++ +K   +RK       V    EP  +  A A 
Sbjct: 6  KIIT--GPIGSGKTTILNRIKESYERKEIFIGQKVGFFGEPTDSTVANAL 53


>gi|325926643|ref|ZP_08187957.1| Adenylate kinase [Xanthomonas perforans 91-118]
 gi|325542995|gb|EGD14444.1| Adenylate kinase [Xanthomonas perforans 91-118]
          Length = 187

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 69/208 (33%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T +       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKD-----------TFDIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  +   +   G   +      ++L E+  + 
Sbjct: 52  ----VMARGDLVSDDILLGMLEARLGQAD--VTKGFILDGYPRNVAQA--NALDELLGKI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLARVDGVGSLDEVLERISKAL 185


>gi|298243248|ref|ZP_06967055.1| excinuclease ABC, A subunit [Ktedonobacter racemifer DSM 44963]
 gi|297556302|gb|EFH90166.1| excinuclease ABC, A subunit [Ktedonobacter racemifer DSM 44963]
          Length = 1063

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F+   G+ G+GK+T I  +L R L    +  H    PG     E   H+
Sbjct: 738 GKFVVITGVSGSGKSTLITDILYRKLAHTFHRAH--ERPGQHETIEGLEHL 786


>gi|294781910|ref|ZP_06747242.1| guanylate kinase [Fusobacterium sp. 1_1_41FAA]
 gi|294481721|gb|EFG29490.1| guanylate kinase [Fusobacterium sp. 1_1_41FAA]
          Length = 185

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|291296264|ref|YP_003507662.1| ABC transporter-like protein [Meiothermus ruber DSM 1279]
 gi|290471223|gb|ADD28642.1| ABC transporter related protein [Meiothermus ruber DSM 1279]
          Length = 274

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 15/27 (55%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
           G FIS  G  G GKTT + LL   +Q
Sbjct: 46 QGEFISLIGPSGCGKTTLLRLLADLIQ 72


>gi|305680426|ref|ZP_07403234.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
          14266]
 gi|305659957|gb|EFM49456.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
          14266]
          Length = 149

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
            I F G+ G GKTT    L   L+ 
Sbjct: 3  RLIVFAGLPGVGKTTQARSLADALRA 28


>gi|237710833|ref|ZP_04541314.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725691|ref|ZP_04556172.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|298385273|ref|ZP_06994832.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
 gi|317474072|ref|ZP_07933351.1| hypothetical protein HMPREF1016_00330 [Bacteroides eggerthii
           1_2_48FAA]
 gi|229435499|gb|EEO45576.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229455555|gb|EEO61276.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|298262417|gb|EFI05282.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
 gi|316909914|gb|EFV31589.1| hypothetical protein HMPREF1016_00330 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 181

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 75/221 (33%), Gaps = 41/221 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S + +        VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGAPGTGKTTTASAVAKE-SDLEKSVHMHTDDFYHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL   
Sbjct: 60  QNLIVIEAFLEAAKRYA----------RGGYDVIVD-------------GIIGPWFLKPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
           Q +  +       IIL    +  LKR   R      + LD   + ++ + E   + F ++
Sbjct: 97  QSLVREHYEVHY-IILRASKEETLKRAVER------SKLDR--KTNIELVETMWEQFCNL 147

Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220
              + +   +VD+ + S        ++ V E +  R + LS
Sbjct: 148 GIYESN---VVDTTNYSI----QETVSAVQEKIASRAALLS 181


>gi|256390708|ref|YP_003112272.1| signal recognition particle protein [Catenulispora acidiphila DSM
           44928]
 gi|256356934|gb|ACU70431.1| signal recognition particle protein [Catenulispora acidiphila DSM
           44928]
          Length = 515

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L R+L+ + +   + 
Sbjct: 107 GLQGAGKTTLAGKLARWLKSEGHTPILV 134


>gi|195641388|gb|ACG40162.1| adenylyl-sulfate kinase 1 [Zea mays]
          Length = 283

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 46/156 (29%), Gaps = 50/156 (32%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G+ G+GK+T    L R L  +    H+T               +L      
Sbjct: 104 QKGCVVWITGLSGSGKSTLACALSRELHGRG---HLTY--------------VLDGDNLR 146

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERD 110
            G   +    A  R +++     V +     G + +         DR             
Sbjct: 147 HGLNRDLSFGAEDRAENIRRVGEVAKLFADAGLVCIASLISPYRSDRSAC-------RDL 199

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
             +H F++               + LD+P+ +   R
Sbjct: 200 LPKHSFIE---------------VFLDVPLQVCEAR 220


>gi|212721006|ref|NP_001131924.1| hypothetical protein LOC100193315 [Zea mays]
 gi|194692934|gb|ACF80551.1| unknown [Zea mays]
          Length = 281

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 46/156 (29%), Gaps = 50/156 (32%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  +   G+ G+GK+T    L R L  +    H+T               +L      
Sbjct: 102 QKGCVVWITGLSGSGKSTLACALSRELHGRG---HLTY--------------VLDGDNLR 144

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERD 110
            G   +    A  R +++     V +     G + +         DR             
Sbjct: 145 HGLNRDLSFGAEDRAENIRRVGEVAKLFADAGLVCIASLISPYRSDRSAC-------RDL 197

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
             +H F++               + LD+P+ +   R
Sbjct: 198 LPKHSFIE---------------VFLDVPLQVCEAR 218


>gi|114462373|gb|ABI75115.1| adenylylsulfate kinase [Cylindrospermopsis raciborskii T3]
          Length = 200

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGKTT    L++ L  K +                    +L       G  ++ 
Sbjct: 31  FTGLSGAGKTTLALKLEQTLFEKGWSTF-----------------VLDGDSVRHGLCSDL 73

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              A+ R +++     V +     G +++ 
Sbjct: 74  GFSASDRSENIRRLGEVAKLFAESGCLVIT 103


>gi|157376264|ref|YP_001474864.1| ABC transporter-related protein [Shewanella sediminis HAW-EB3]
 gi|157318638|gb|ABV37736.1| ABC transporter-related protein [Shewanella sediminis HAW-EB3]
          Length = 272

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           G  ++  G  GAGK+T +  +   L+ +N DV
Sbjct: 39 KGKIVTLLGPNGAGKSTTLKAISGLLKTENGDV 71


>gi|121535830|ref|ZP_01667630.1| cytidylate kinase [Thermosinus carboxydivorans Nor1]
 gi|121305602|gb|EAX46544.1| cytidylate kinase [Thermosinus carboxydivorans Nor1]
          Length = 225

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          M   L I+ +G  GAGK+T   ++   L+    D
Sbjct: 1  MRK-LVIAIDGPAGAGKSTVAQIVAERLEYTYID 33


>gi|86749815|ref|YP_486311.1| ABC transporter related [Rhodopseudomonas palustris HaA2]
 gi|86572843|gb|ABD07400.1| ABC transporter related [Rhodopseudomonas palustris HaA2]
          Length = 273

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51
          +G  I+F G   AGK+T +  L   L          R+     A E A+
Sbjct: 31 AGKLIAFVGPNAAGKSTLLMALAGLLPSTGVVALADRDLSSLSARERAK 79


>gi|68349531|gb|AAY96655.1| polyP-AMP phosphotransferase [Myxococcus xanthus]
          Length = 259

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + +GK   I  L   +  + Y V     P  +P+ E  RH  L     +     
Sbjct: 71  IVFEGWDASGKGGAIRRLTTLMDPRGYKV----WPISSPSEEERRHHYLWRFWRKTPGAG 126

Query: 67  EAIVF 71
           E  +F
Sbjct: 127 EVCMF 131


>gi|55821313|ref|YP_139755.1| choline/proline/glycine betaine ABC uptake transporter
          ATP-binding protein [Streptococcus thermophilus LMG
          18311]
 gi|55737298|gb|AAV60940.1| choline/proline/glycine betaine ABC uptake transporter
          ATP-binding protein [Streptococcus thermophilus LMG
          18311]
 gi|312278640|gb|ADQ63297.1| Choline/proline/glycine betaine ABC uptake transporter
          ATP-binding protein [Streptococcus thermophilus ND03]
          Length = 251

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + +G FI+  G  G+GKTT + ++ R ++  +  V  
Sbjct: 27 IKTGEFITILGTSGSGKTTTLKMINRLIEPSSGAVIF 63


>gi|268578027|ref|XP_002643996.1| Hypothetical protein CBG17377 [Caenorhabditis briggsae]
 gi|187025857|emb|CAP35054.1| hypothetical protein CBG_17377 [Caenorhabditis briggsae AF16]
          Length = 210

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 64/219 (29%), Gaps = 41/219 (18%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62
            FI   G  G+GK T               +          + +  R  + S      + 
Sbjct: 23  FFIV--GGPGSGKGTQCD-----------KIVAKYGLTHLSSGDLLRDEVKSGSPRGAQL 69

Query: 63  GAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            A  E  A+V     LD V+  +  A+ +G       FL   Y  +  +       +   
Sbjct: 70  TAIMESGALVPLEVVLDLVKEAMLIAIEKG----SKGFLIDGYPREVAQGQQFESEIQEA 125

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQ 175
           +            +  D+  +  +KR+  R     R    +D  +++             
Sbjct: 126 K----------LVLFFDVAEETLVKRLLGRAETSGRADDNIDTIKKRLHTFVTSTAPVVD 175

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            +         +   +++  S   +   ++  + ++  K
Sbjct: 176 YY-----ESKGKLVRINAEGSVDDIFGVVVANLDKVTSK 209


>gi|325520591|gb|EGC99663.1| hypothetical protein B1M_35471 [Burkholderia sp. TJI49]
          Length = 235

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 18/49 (36%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            +  EG+ G+GK+T +  +   +Q     V    E        A   +
Sbjct: 15 RLVIVEGMMGSGKSTTMRFIATRMQAAGRAVVAVHERTDPHPVRATDEL 63


>gi|311992828|ref|YP_004009695.1| hypothetical protein Acj61p078 [Acinetobacter phage Acj61]
 gi|295815117|gb|ADG36043.1| conserved hypothetical phage protein [Acinetobacter phage Acj61]
          Length = 179

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 34/120 (28%), Gaps = 27/120 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  EG + +GKTT I      L+     V   + P  T                    
Sbjct: 3   KLILVEGPDNSGKTTFIQG----LESLGAKV--MKFPKKTSEGRF-----------TCVT 45

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEI 123
             E  +F           +   +   +  + DR   S+  Y+      +   F+D  Q  
Sbjct: 46  RNEVAIF---------ETMLQYINNDQTYVLDRGGLSNIVYESVLRGKRTDVFMDDFQRF 96


>gi|309799149|ref|ZP_07693400.1| ABC transporter, ATP-binding/permease protein [Streptococcus
           infantis SK1302]
 gi|308117238|gb|EFO54663.1| ABC transporter, ATP-binding/permease protein [Streptococcus
           infantis SK1302]
          Length = 399

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL 28
            G  I+  G  G+GKTT ++L+ RFL
Sbjct: 374 KGKMIAVVGPTGSGKTTIMNLINRFL 399


>gi|307594975|ref|YP_003901292.1| ABC transporter-like protein [Vulcanisaeta distributa DSM 14429]
 gi|307550176|gb|ADN50241.1| ABC transporter related protein [Vulcanisaeta distributa DSM 14429]
          Length = 289

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 27/198 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEF 62
           G+  +  G  GAGKTT I +L   L     + +V        A+E  R + ++       
Sbjct: 29  GVIATLLGPNGAGKTTLIRILTTELMPHGGEAYVAGFNVVNQASEVRRRIAVIPQDARPI 88

Query: 63  GAEA-------EAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQH 114
                        ++    R D      R +L E G     D    ++  YQ     ++ 
Sbjct: 89  SYMTPHEFVYSYLLLRGLPRND-ARKAARDSLEELGLW---D--FRNTPIYQLSGGMTRR 142

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174
           + + ++   + +       + LD    +GL     R        L  +      I     
Sbjct: 143 VLVAAVLASNAE------VVFLD-EPTVGLDAASRRVV---WNSLRRYSDSGASIFLTTH 192

Query: 175 QIFLDIARNQPDRCHIVD 192
             +++ A    D   ++D
Sbjct: 193 --YIEEAEQISDIVFLID 208


>gi|300123664|emb|CBK24936.2| unnamed protein product [Blastocystis hominis]
          Length = 241

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 72/239 (30%), Gaps = 68/239 (28%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GK T    +K+      Y V            +  R  +      E+G  A+  +
Sbjct: 31  GPPGCGKGTQAPEIKKE-----YCV------CHLATGDMLRDAV--ARGTEYGLRAKEAM 77

Query: 71  FAAARL--DHVENVIR-----PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            A   +  D V N+I+     PA  +G   + D F          R   Q   LD  + +
Sbjct: 78  NAGQLVSDDIVVNIIKDNIKSPACQKGF--ILDGF---------PRTIPQAQMLD--EML 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY-----------------------------SLR 154
           +   +  D  +  D+P    ++R+  R                                R
Sbjct: 125 AADGMKIDAVLAFDVPDSKLVERISGRRVHPASGRSYHIVFNPPKEEGKDDVTGEPLIQR 184

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211
           +  C +  E++    H K       I     +R     + +    + V  +I   + E 
Sbjct: 185 KDDCPEVLEKRLAEYHSKTA----PIIDYYGERGLVKTIQADAPIEQVWKDITAALGEA 239


>gi|260220351|emb|CBA27801.1| sn-glycerol-3-phosphate import ATP-binding protein ugpC
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 344

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC 57
           G FI   G  G GK+T + ++    +           V    EP     A   ++  L  
Sbjct: 33  GEFIVIVGPSGCGKSTLLRMVAGLEEVSGGQISIGGRVVNDLEPSDRDIAMVFQNYALYP 92

Query: 58  GVDEFGAEAEAI 69
            +  F   A  +
Sbjct: 93  HMSVFENMAYGL 104


>gi|239616619|ref|YP_002939941.1| cytidylate kinase [Kosmotoga olearia TBF 19.5.1]
 gi|239505450|gb|ACR78937.1| cytidylate kinase [Kosmotoga olearia TBF 19.5.1]
          Length = 216

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  G+GK+T   +L   L
Sbjct: 3  IAIDGPAGSGKSTVAKMLAERL 24


>gi|168063482|ref|XP_001783700.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664765|gb|EDQ51472.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 168

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 47/149 (31%), Gaps = 37/149 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVD 60
           N  +F+   G+ G GK+T   +L   L  K  D     E        A + +  L     
Sbjct: 9   NKNIFLV--GMMGCGKSTVGKILADALGYKYRD--SDDEIEKIEGGLAVKEIFRLKGETQ 64

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               E++A+          E         G  ++     D+++ Y G             
Sbjct: 65  FRKTESDAL------RKLCEKKDLVVATGGGAVI----YDANWEYLGNG----------- 103

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN 149
                       T+ LD+PV +  KRV  
Sbjct: 104 -----------ITVWLDVPVKVLAKRVTA 121


>gi|161528612|ref|YP_001582438.1| excinuclease ABC subunit A [Nitrosopumilus maritimus SCM1]
 gi|160339913|gb|ABX13000.1| excinuclease ABC, A subunit [Nitrosopumilus maritimus SCM1]
          Length = 939

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYD 34
           GLF+S  G+ G+GK+T I+ +L + L+   Y 
Sbjct: 631 GLFVSITGVSGSGKSTLINDILLKALENHFYK 662


>gi|150400550|ref|YP_001324316.1| ABC transporter related [Methanococcus aeolicus Nankai-3]
 gi|150013253|gb|ABR55704.1| ABC transporter related [Methanococcus aeolicus Nankai-3]
          Length = 375

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          M  G  +   G  GAGK+T +  +  +L+ KN  V++
Sbjct: 24 MKEGEILCIIGPNGAGKSTLLKTIATYLKPKNGAVYL 60


>gi|115377135|ref|ZP_01464349.1| signal recognition particle [Stigmatella aurantiaca DW4/3-1]
 gi|115365844|gb|EAU64865.1| signal recognition particle [Stigmatella aurantiaca DW4/3-1]
          Length = 481

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 51/159 (32%), Gaps = 29/159 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA----EAARHVLLSCGVDEFG--- 63
           G++G+GKTT    L   L ++     +       PAA    +     L      E G   
Sbjct: 55  GLQGSGKTTTTGKLANRLLQEGRKPLLVAADIYRPAAVDQLKVLGERLKVPVYFEPGVAP 114

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E     +AAAR             +  ++L D            R +     +  L+ I
Sbjct: 115 PELAVRGYAAAREQ-----------KCDVVLID---------TAGRLAIDESLMAELESI 154

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
               V PD  I+L     IG   V+          LD F
Sbjct: 155 -KGNVHPD-NILLVCDAMIGQDAVRTAAEFDRRLTLDGF 191


>gi|108798927|ref|YP_639124.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. MCS]
 gi|119868042|ref|YP_937994.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. KMS]
 gi|126434527|ref|YP_001070218.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. JLS]
 gi|108769346|gb|ABG08068.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. MCS]
 gi|119694131|gb|ABL91204.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. KMS]
 gi|126234327|gb|ABN97727.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium sp. JLS]
          Length = 520

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTT    L ++L+ + + 
Sbjct: 107 GLQGSGKTTLAGKLAKWLRGQGHT 130


>gi|10140943|ref|NP_065520.1| thymidine kinase [Alcelaphine herpesvirus 1]
 gi|81920573|sp|O36371|KITH_ALHV1 RecName: Full=Thymidine kinase
 gi|2337984|gb|AAC58068.1| thymidine kinase [Alcelaphine herpesvirus 1]
          Length = 561

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 25/175 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEF 62
           FEG   AGKTT ++  ++ L     +     EP        T        +   C   + 
Sbjct: 243 FEGCMAAGKTTLLNFARQTLSDD--EALTIPEPMRFWTEVYTNVLSQIVKINKECKPGKT 300

Query: 63  GAEAEA----IVFAA---------ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--G 107
              AE     + FA           R    ++ ++P     K ++ DR   S+       
Sbjct: 301 STTAELVSCQLKFATPLKTQSLFLQRSVKKDSEMQPVGPLDKWVIVDRHQLSALVVFPLV 360

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDY 161
                   F D    + + E  P   I ++ + V+    R++ R  + E   +D 
Sbjct: 361 LMRRGMLSFSDFFNLLGMFEAHPGEVIALMSVNVEENFTRLKKRGRVCE-RHIDR 414


>gi|10955106|ref|NP_059762.1| hypothetical protein pTi_090 [Agrobacterium tumefaciens]
 gi|154804|gb|AAA27402.1| repA protein (GTG start codon) [Plasmid pTiB6S3]
 gi|8572703|gb|AAF77149.1| repA [Agrobacterium tumefaciens]
          Length = 405

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  + Y V           +     +      D    E    ++AA
Sbjct: 132 GSGKTTTSAHLAQYLALQGYRVLAVDLDPQASLSALLGVL---PETDVGANET---LYAA 185

Query: 74  ARLDH----VENVIRPALMEGKILL 94
            R D     + +VIRP   +G  L+
Sbjct: 186 IRYDDTRRPLRDVIRPTYFDGLHLV 210


>gi|50085394|ref|YP_046904.1| cell division protein [Acinetobacter sp. ADP1]
 gi|49531370|emb|CAG69082.1| cell division protein [Acinetobacter sp. ADP1]
          Length = 373

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 176 GVNGVGKTTTIGKLAKRLQGEGKKVMLAA--GDTFRAAATEQLQIWGERNNISVVAQG-- 231

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 232 HGADSASVIFDAFESARAKGIDVLIAD 258


>gi|462450|sp|P33802|KITH_HSVBM RecName: Full=Thymidine kinase
 gi|227948|prf||1714185A gene A
          Length = 686

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 25/175 (14%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEF 62
           FEG   AGKTT ++  ++ L     +     EP        T        +   C   + 
Sbjct: 241 FEGCMAAGKTTLLNFARQTLSDD--EALTIPEPMRFWTEVYTNVLSQIVKINKECKPGKT 298

Query: 63  GAEAEA----IVFAA---------ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--G 107
              AE     + FA           R    ++ ++P     K ++ DR   S+       
Sbjct: 299 STTAELVSCQLKFATPLKTQSLFLQRSVKKDSEMQPVGPLDKWVIVDRHQLSALVVFPLV 358

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDY 161
                   F D    + + E  P   I ++ + V+    R++ R  + E   +D 
Sbjct: 359 LMRRGMLSFSDFFNLLGMFEAHPGEVIALMSVNVEENFTRLKKRGRVCE-RHIDR 412


>gi|15894995|ref|NP_348344.1| guanylate kinase [Clostridium acetobutylicum ATCC 824]
 gi|20532126|sp|Q97ID0|KGUA_CLOAB RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|15024684|gb|AAK79684.1|AE007681_5 Guanylate kinase, YLOD B.subtilis ortholog [Clostridium
          acetobutylicum ATCC 824]
 gi|325509132|gb|ADZ20768.1| guanylate kinase [Clostridium acetobutylicum EA 2018]
          Length = 209

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 8/44 (18%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKR----FLQRKNYDVHVTREP 41
            GL I   G  GAGK T    L +    +L         TREP
Sbjct: 3  KKGLLIVISGPSGAGKGTICKALMKEQQFWLSVS----ATTREP 42


>gi|329937464|ref|ZP_08287022.1| ABC transporter ATP-binding protein [Streptomyces griseoaurantiacus
           M045]
 gi|329303340|gb|EGG47227.1| ABC transporter ATP-binding protein [Streptomyces griseoaurantiacus
           M045]
          Length = 312

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHV 53
           G  GAGKTT I  L   L+     + +  EP  GG       R +
Sbjct: 94  GPNGAGKTTLIRALATVLRPAGGTLELLGEPVGGGGEYRALRRRI 138


>gi|330505416|ref|YP_004382285.1| signal recognition particle-docking protein FtsY [Pseudomonas
           mendocina NK-01]
 gi|328919702|gb|AEB60533.1| signal recognition particle-docking protein FtsY [Pseudomonas
           mendocina NK-01]
          Length = 443

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ+    V +    G T  A A   + +    +     A+   
Sbjct: 244 GVNGVGKTTTIGKLAKKLQQDGKKVMLAA--GDTFRAAAVEQLQVWGERNNIAVIAQH-- 299

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 300 TGADSASVIFDAVQAAKSRGVDVLIAD 326


>gi|328471672|gb|EGF42549.1| hypothetical protein VP10329_00915 [Vibrio parahaemolyticus 10329]
          Length = 180

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 24/117 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDE 61
           I   G  GAGKTT ++ L +               G    AEA+R ++     L  G+  
Sbjct: 4   IVITGGPGAGKTTLLNALGKQ--------------GYATFAEASRSLIEQQSALDNGILP 49

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFL 117
           +    E   FA   L+ +    R AL    +   DR +    AY Q         FL
Sbjct: 50  WTNLPE---FAKLCLNLMSEQKREALNTN-VAFVDRAIPDIVAYLQVGGCHVDQAFL 102


>gi|299536776|ref|ZP_07050084.1| cell division protein ftsY-like protein [Lysinibacillus fusiformis
           ZC1]
 gi|298727788|gb|EFI68355.1| cell division protein ftsY-like protein [Lysinibacillus fusiformis
           ZC1]
          Length = 423

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I F G+ G GKTT I  L   L+ +   V +    G T  A A   +
Sbjct: 213 ILFVGVNGVGKTTTIGKLAHRLKSQGKTVVLAA--GDTFRAGAIDQL 257


>gi|290978246|ref|XP_002671847.1| pyruvate phosphate dikinase [Naegleria gruberi]
 gi|284085419|gb|EFC39103.1| pyruvate phosphate dikinase [Naegleria gruberi]
          Length = 1141

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 32/83 (38%), Gaps = 16/83 (19%)

Query: 133  TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP------- 185
             +  D P +I  +R+  R      +  +    + +   +KR + + D  +  P       
Sbjct: 1065 VLFFDCPEEILEQRLLERGKTSGRSDDN---AESI---KKRFKTYSD--QTMPVIGYFKK 1116

Query: 186  -DRCHIVDSAHSFQSVATNILNI 207
             DR   +DS+ + + V   +  +
Sbjct: 1117 TDRVKTIDSSKTQEEVFAEVCKL 1139


>gi|260596758|ref|YP_003209329.1| Shikimate kinase 2 [Cronobacter turicensis z3032]
 gi|260215935|emb|CBA28532.1| Shikimate kinase 2 [Cronobacter turicensis z3032]
          Length = 174

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FLDIARNQPDRCH 189
             I L++PV++  +R++      +   L      +++      R   + + A       H
Sbjct: 96  IVIYLNVPVEVLAQRLEAFPEAGQRPTLTGKPVTEEIADVLAVRDALYRECAH------H 149

Query: 190 IVDSAHSFQSVATNILNIVW 209
           ++D+A +   + + I++ + 
Sbjct: 150 VIDAADAPAVIVSRIIDALH 169


>gi|229069075|ref|ZP_04202367.1| Adenylyl-sulfate kinase [Bacillus cereus F65185]
 gi|228714020|gb|EEL65903.1| Adenylyl-sulfate kinase [Bacillus cereus F65185]
          Length = 197

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 72/208 (34%), Gaps = 46/208 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+  +GK+T  + + R L  KN                   + +L       G   
Sbjct: 28  IWFTGLSASGKSTVANAVARKLFEKNIG-----------------NYVLDGDNIRHGLNK 70

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +     + R++++     V +  + +G ++L         A+       +    D L   
Sbjct: 71  DLGFSESDRMENIRRIGEVAKLFVDQGTVVLT--------AFISPFRVDRKQVRDLLA-- 120

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + + +     I +  P++   KR   +   +++   D  +   +         + + A+ 
Sbjct: 121 ADEFIE----IFVKCPIEECEKR-DPKGLYKKARKGDIKDFTGID------SPYEEPAQA 169

Query: 184 QPDRCHIVDSAH-SFQSVATNILNIVWE 210
           +     IV++   S +  A  I+  + E
Sbjct: 170 E----LIVETHKYSIEECAEQIVKYLQE 193


>gi|225872835|ref|YP_002754292.1| hypothetical protein ACP_1194 [Acidobacterium capsulatum ATCC
           51196]
 gi|225794238|gb|ACO34328.1| conserved domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 674

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 12/87 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV---TREPGGTPAAEAARHVLLSC---------G 58
           G  G+GKTT I  L R +Q + +   V     E      +E    ++L+           
Sbjct: 232 GDTGSGKTTLIMQLLRQVQERGHPAIVYDPACEFIQRFYSEKRHDIVLNPLDRRCPYWGP 291

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRP 85
            +E    +EA   AA+   H +   + 
Sbjct: 292 SEELVRRSEARTLAASLFQHPDERTKH 318


>gi|219117517|ref|XP_002179553.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409444|gb|EEC49376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 818

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVT---REPGGTPAAE-AARHVLLSCGVDEFGA 64
            EG++ AGK++   ++ + L++  Y V      R P     A+     +      D +  
Sbjct: 505 LEGLDCAGKSSTGGIICQALEKSGYAVRTAQHNRPPTPEQKAKPWMDRIRFEYPDDLYDD 564

Query: 65  EAEAIVFAAARLD 77
           + E   FA+   D
Sbjct: 565 DEEVPAFASVMWD 577


>gi|215485268|ref|YP_002327699.1| dephospho-CoA kinase [Escherichia coli O127:H6 str. E2348/69]
 gi|312966231|ref|ZP_07780457.1| dephospho-CoA kinase [Escherichia coli 2362-75]
 gi|215263340|emb|CAS07655.1| dephospho-CoA kinase [Escherichia coli O127:H6 str. E2348/69]
 gi|312289474|gb|EFR17368.1| dephospho-CoA kinase [Escherichia coli 2362-75]
          Length = 206

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILTAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|222529673|ref|YP_002573555.1| ABC transporter-like protein [Caldicellulosiruptor bescii DSM
          6725]
 gi|222456520|gb|ACM60782.1| ABC transporter related [Caldicellulosiruptor bescii DSM 6725]
          Length = 278

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARH 52
           G F++  G+ G+GK+T   L+   L  +  DV V       T      R 
Sbjct: 34 RGEFVAILGLNGSGKSTLAKLINGLLIPEKGDVIVDGMNTKDTEKIWNIRR 84


>gi|195552208|ref|XP_002076397.1| GD15201 [Drosophila simulans]
 gi|194202046|gb|EDX15622.1| GD15201 [Drosophila simulans]
          Length = 88

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          M +G  I+  G  GAGKTT ++ +
Sbjct: 58 MKTGDLIAILGGSGAGKTTLLAAI 81


>gi|183237100|ref|XP_001914571.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|169799380|gb|EDS88653.1| hypothetical protein EHI_106800 [Entamoeba histolytica HM-1:IMSS]
          Length = 105

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 8/92 (8%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
          FI   G  G GK+T I  LKR L +K       +E      +   +  +L   +   G+ 
Sbjct: 6  FIVITGGVGVGKSTLIHNLKRSLPKKER--IFIKEYIDFKPSTGKK--MLEETLKGKGSM 61

Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
           E  +F    +D  +  +  A    K ++ +R
Sbjct: 62 YELQLFI---IDCFKEQLERAKQM-KYVIMER 89


>gi|156337047|ref|XP_001619784.1| hypothetical protein NEMVEDRAFT_v1g223828 [Nematostella vectensis]
 gi|156203629|gb|EDO27684.1| predicted protein [Nematostella vectensis]
          Length = 315

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +G  ++  G  G+GK+T + LL RF   +   V V  +     + E+ R V+
Sbjct: 234 AGKKVAIVGGSGSGKSTIVRLLFRFFDPQGGRVLVAGQDIRDFSLESLRKVV 285


>gi|149376612|ref|ZP_01894372.1| heme exporter protein CcmA [Marinobacter algicola DG893]
 gi|149359130|gb|EDM47594.1| heme exporter protein CcmA [Marinobacter algicola DG893]
          Length = 212

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 4/84 (4%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF----GA 64
            EG  G+GKTT + +L       + D+     P  T   E  R++L              
Sbjct: 36  VEGPNGSGKTTLLRILAGLNDSYSGDMLWRGRPRHTYREEFLRNMLYLGHRPGIKPLLTP 95

Query: 65  EAEAIVFAAARLDHVENVIRPALM 88
                   A R    + V+  AL 
Sbjct: 96  MENLRTLMAGRRYVTDKVLWQALE 119


>gi|118587517|ref|ZP_01544941.1| deoxynucleoside kinase [Oenococcus oeni ATCC BAA-1163]
 gi|118431968|gb|EAV38710.1| deoxynucleoside kinase [Oenococcus oeni ATCC BAA-1163]
          Length = 214

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 45/194 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+  +LL + L  K     V+  P            +L    D+    A
Sbjct: 2   IVLSGTIGAGKTSLTNLLSKHLGSKAIYESVSDNP------------ILPLFYDDPKKYA 49

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHL-------- 115
             +   F   RL +++N     L      + DR +   +  +Q   D  +          
Sbjct: 50  FLLQIYFLNKRLQNIKNAQENKLD-----VIDRSIFEDALLFQLNADLGRSTQTEVDIYK 104

Query: 116 -----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 ++ L E+  ++  PD  I + +  D  L R++ R           FE+  + +H
Sbjct: 105 SLLSNMMEKLDELPSKD--PDLLIHVRVSFDNMLSRIEKRGRD--------FEQ--ISVH 152

Query: 171 EKRRQIFLDIARNQ 184
               + + ++ R  
Sbjct: 153 SDLYKYYQELNRRY 166


>gi|15893399|ref|NP_346748.1| adenylylsulfate kinase [Clostridium acetobutylicum ATCC 824]
 gi|24418358|sp|Q97MT8|CYSC_CLOAB RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|15022928|gb|AAK78088.1|AE007523_3 Adenylylsulfate kinase [Clostridium acetobutylicum ATCC 824]
 gi|325507511|gb|ADZ19147.1| Adenylylsulfate kinase [Clostridium acetobutylicum EA 2018]
          Length = 200

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 39/143 (27%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  S L++ L    Y  +                 LL      +G  ++ 
Sbjct: 34  FTGLSGSGKSTVASALEKKLYEMGYLTY-----------------LLDGDNLRYGLNSDL 76

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEI 123
              +  R +    V  V +     G I +      S +       R      F++     
Sbjct: 77  GFKSEDRTENIRRVSEVAKLFADAGIITITT--FISPFIEDRNNARKLLGKDFVE----- 129

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
                     + +D P+++  KR
Sbjct: 130 ----------VYIDCPIEVCEKR 142


>gi|113969884|ref|YP_733677.1| ABC transporter ATPase [Shewanella sp. MR-4]
 gi|113884568|gb|ABI38620.1| ABC transporter related [Shewanella sp. MR-4]
          Length = 640

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+  G  G GK+T I LL   LQ ++ +V V
Sbjct: 351 IALIGPNGCGKSTLIKLLIEKLQPQSGEVKV 381


>gi|117920051|ref|YP_869243.1| ABC transporter ATPase [Shewanella sp. ANA-3]
 gi|117612383|gb|ABK47837.1| ABC transporter related [Shewanella sp. ANA-3]
          Length = 640

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+  G  G GK+T I LL   LQ ++ +V V
Sbjct: 351 IALIGPNGCGKSTLIKLLIEKLQPQSGEVKV 381


>gi|146292734|ref|YP_001183158.1| ABC transporter ATPase [Shewanella putrefaciens CN-32]
 gi|145564424|gb|ABP75359.1| ABC transporter related [Shewanella putrefaciens CN-32]
 gi|319426038|gb|ADV54112.1| ABC transporter related protein [Shewanella putrefaciens 200]
          Length = 641

 Score = 36.5 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+  G  G GK+T I LL   LQ ++ +V V
Sbjct: 351 IALIGPNGCGKSTLIKLLIEKLQPQSGEVKV 381


>gi|326565744|gb|EGE15906.1| polyphosphate kinase 2 [Moraxella catarrhalis BC1]
          Length = 368

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 144 IIFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTEQERGQW----------------- 186

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 187 ----YFQRYVQHLPT-------AGEIVLFDRSWY 209


>gi|325831015|ref|ZP_08164339.1| CobB/CobQ-like glutamine amidotransferase domain protein
           [Eggerthella sp. HGA1]
 gi|325486936|gb|EGC89382.1| CobB/CobQ-like glutamine amidotransferase domain protein
           [Eggerthella sp. HGA1]
          Length = 744

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 22/122 (18%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
           GKTT  +LL   L+     V   R   G          LL  G  ++G      VF    
Sbjct: 62  GKTTVTNLLADALELAGQRVVCNR--TGANLDSGVATSLLHAGPSDWG------VFECDE 113

Query: 76  LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM--PDCT 133
           L   +  I P L    ++L + F D            +   +D +Q+  V  +   PD T
Sbjct: 114 LWLAK--ILPQLQATYVVLLNLFRD---------QLDRVGEIDRIQDSIVGALEKSPD-T 161

Query: 134 II 135
           ++
Sbjct: 162 VL 163


>gi|325122225|gb|ADY81748.1| putative transport protein (ABC superfamily, ATP-bind and membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 610

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           +G  I+  G  G GK+T + LL RF + +   + + R P  +    + R 
Sbjct: 394 AGKIIAIVGPTGHGKSTMVQLLTRFYEPQQGGIFLDRYPIQSIHLASLRQ 443


>gi|311695303|gb|ADP98176.1| dephospho-CoA kinase [marine bacterium HP15]
          Length = 199

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 28/82 (34%), Gaps = 12/82 (14%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  I++D+P +  ++R   R        ++      +   ++  + +            +
Sbjct: 126 DRIIVIDVPEESQIERTMAR-DTNSREQVERIIAAQMSREDRLARAYE-----------V 173

Query: 191 VDSAHSFQSVATNILNIVWELV 212
           +D+      V   +  +   L+
Sbjct: 174 IDNDRPLDEVTRQVRELHERLL 195


>gi|302023509|ref|ZP_07248720.1| ABC transporter ATP-binding protein [Streptococcus suis 05HAS68]
          Length = 219

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 27/87 (31%), Gaps = 8/87 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLS 56
           + +G  I   G  G+GKTT I L+   LQ +   V               +       L 
Sbjct: 14  LTAGKIIGLLGPNGSGKTTMIKLINGLLQPEYGQVLINGRTPSPETKAIVSYLPDTTYLD 73

Query: 57  CGVDEFGAEAEAIVFAAA----RLDHV 79
             +    A      F A     R  H+
Sbjct: 74  EHMKVLEAITFFEDFYADFDKERALHL 100


>gi|296219770|ref|XP_002756040.1| PREDICTED: GTP-binding protein SAR1a-like [Callithrix jacchus]
          Length = 198

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTRE 40
           SG    F G++ AGKTT + +LK   L +    +H+T E
Sbjct: 24 KSGKL-VFLGLDNAGKTTLLHMLKDDRLGQHVPPLHLTSE 62


>gi|296113154|ref|YP_003627092.1| polyphosphate kinase 2 [Moraxella catarrhalis RH4]
 gi|295920848|gb|ADG61199.1| polyphosphate kinase 2 [Moraxella catarrhalis RH4]
 gi|326560351|gb|EGE10738.1| polyphosphate kinase 2 [Moraxella catarrhalis 46P47B1]
 gi|326564878|gb|EGE15082.1| polyphosphate kinase 2 [Moraxella catarrhalis 12P80B1]
 gi|326570394|gb|EGE20434.1| polyphosphate kinase 2 [Moraxella catarrhalis BC8]
 gi|326575733|gb|EGE25656.1| polyphosphate kinase 2 [Moraxella catarrhalis CO72]
 gi|326577198|gb|EGE27092.1| polyphosphate kinase 2 [Moraxella catarrhalis O35E]
          Length = 378

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 144 IIFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTEQERGQW----------------- 186

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 187 ----YFQRYVQHLPT-------AGEIVLFDRSWY 209


>gi|315502425|ref|YP_004081312.1| signal recognition particle protein [Micromonospora sp. L5]
 gi|315409044|gb|ADU07161.1| signal recognition particle protein [Micromonospora sp. L5]
          Length = 517

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++G+GKTT    L R+L+ + +
Sbjct: 107 GLQGSGKTTLAGKLARWLKSQGH 129


>gi|297601577|ref|NP_001051074.2| Os03g0714400 [Oryza sativa Japonica Group]
 gi|255674838|dbj|BAF12988.2| Os03g0714400 [Oryza sativa Japonica Group]
          Length = 136

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
               +     ++H+E+ +   L E
Sbjct: 69 GPNGGLIYC--MEHLEDNLDDWLDE 91


>gi|253989674|ref|YP_003041030.1| arsenical pump-driving ATPase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781124|emb|CAQ84286.1| arsenical pump-driving ATPase [Photorhabdus asymbiotica]
          Length = 583

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L  +  DVH+T               L +  V 
Sbjct: 333 MGKG---------GVGKTTIAASIAVKLAEQGLDVHLTTSDPAAHIENTLNGSLPNLQVS 383

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
                AE   +   R   +E   +    EG+ +L
Sbjct: 384 RIDPIAEIERY---RNYVLETKGKDLNEEGRAIL 414


>gi|257792727|ref|YP_003183333.1| hypothetical protein Elen_3001 [Eggerthella lenta DSM 2243]
 gi|317489014|ref|ZP_07947541.1| CobB/CobQ-like glutamine amidotransferase domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
 gi|257476624|gb|ACV56944.1| domain of unknown function DUF1727 [Eggerthella lenta DSM 2243]
 gi|316911881|gb|EFV33463.1| CobB/CobQ-like glutamine amidotransferase domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
          Length = 744

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 22/122 (18%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
           GKTT  +LL   L+     V   R   G          LL  G  ++G      VF    
Sbjct: 62  GKTTVTNLLADALELAGQRVVCNR--TGANLDSGVATSLLHAGPSDWG------VFECDE 113

Query: 76  LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM--PDCT 133
           L   +  I P L    ++L + F D            +   +D +Q+  V  +   PD T
Sbjct: 114 LWLAK--ILPQLQATYVVLLNLFRD---------QLDRVGEIDRIQDSIVGALEKSPD-T 161

Query: 134 II 135
           ++
Sbjct: 162 VL 163


>gi|254974093|ref|ZP_05270565.1| putative lantibiotic ABC transporter,ATP-binding protein
          [Clostridium difficile QCD-66c26]
 gi|255091492|ref|ZP_05320970.1| putative lantibiotic ABC transporter,ATP-binding protein
          [Clostridium difficile CIP 107932]
 gi|255313220|ref|ZP_05354803.1| putative lantibiotic ABC transporter,ATP-binding protein
          [Clostridium difficile QCD-76w55]
 gi|255515910|ref|ZP_05383586.1| putative lantibiotic ABC transporter,ATP-binding protein
          [Clostridium difficile QCD-97b34]
 gi|255649004|ref|ZP_05395906.1| putative lantibiotic ABC transporter,ATP-binding protein
          [Clostridium difficile QCD-37x79]
          Length = 234

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G  GAGK+T + +L   L+  +  +   R+P    +      ++ S  +       E ++
Sbjct: 38 GPNGAGKSTTLKMLVGLLRPTDGRIIFDRKPWKRESLAKIGSLIESPALYGNLTAEENLL 97


>gi|168334359|ref|ZP_02692543.1| Molybdopterin-guanine dinucleotide biosynthesis MobB region
          [Epulopiscium sp. 'N.t. morphotype B']
          Length = 163

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48
          I+  G++ +GKTT I+ +   L  + Y V V +  G   AA+
Sbjct: 9  IAISGVKNSGKTTLIAKIVAALASEGYKVGVIKHDGHEFAAD 50


>gi|164686828|ref|ZP_02210856.1| hypothetical protein CLOBAR_00424 [Clostridium bartlettii DSM
          16795]
 gi|164604218|gb|EDQ97683.1| hypothetical protein CLOBAR_00424 [Clostridium bartlettii DSM
          16795]
          Length = 208

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G F +  G+ G+GKTT +SLL 
Sbjct: 29 KGKFYTILGVSGSGKTTLLSLLA 51


>gi|49485074|ref|YP_042295.1| ABC transporter, ATP-binding protein [Staphylococcus aureus
          subsp. aureus MSSA476]
 gi|49243517|emb|CAG41941.1| ABC transporter, ATP-binding protein [Staphylococcus aureus
          subsp. aureus MSSA476]
          Length = 226

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N+G FI+  G  G+GK+T I++L
Sbjct: 28 INAGEFIAIMGPSGSGKSTLINIL 51


>gi|194433381|ref|ZP_03065660.1| dephospho-CoA kinase [Shigella dysenteriae 1012]
 gi|194418309|gb|EDX34399.1| dephospho-CoA kinase [Shigella dysenteriae 1012]
 gi|332097833|gb|EGJ02806.1| dephospho-CoA kinase [Shigella dysenteriae 155-74]
          Length = 206

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTRKHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|330721416|gb|EGG99477.1| Signal recognition particle receptor protein FtsY [gamma
           proteobacterium IMCC2047]
          Length = 278

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 4/84 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L + LQ +   V +    G T  A A   +      ++    A+   
Sbjct: 83  GVNGAGKTTTIGKLAKRLQSEGRSVMLAA--GDTFRAAAVEQLQEWGSRNDVPVIAQH-- 138

Query: 71  FAAARLDHVENVIRPALMEGKILL 94
             A     + + +  A   G  +L
Sbjct: 139 TGADSASVIFDAVESARARGADVL 162


>gi|302865880|ref|YP_003834517.1| signal recognition particle protein [Micromonospora aurantiaca ATCC
           27029]
 gi|302568739|gb|ADL44941.1| signal recognition particle protein [Micromonospora aurantiaca ATCC
           27029]
          Length = 517

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++G+GKTT    L R+L+ + +
Sbjct: 107 GLQGSGKTTLAGKLARWLKSQGH 129


>gi|261822753|ref|YP_003260859.1| adenylylsulfate kinase [Pectobacterium wasabiae WPP163]
 gi|261606766|gb|ACX89252.1| adenylylsulfate kinase [Pectobacterium wasabiae WPP163]
          Length = 205

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ I F G+ G+GK+T    L++ L ++    +                 LL      
Sbjct: 30  HQGVVIWFTGLSGSGKSTLAGALEQALHQRGVSTY-----------------LLDGDNVR 72

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +       R +++     V +  +  G ++L 
Sbjct: 73  HGLCRDLGFTDDDRRENIRRVGEVAKLMVDAGLVVLT 109


>gi|213401219|ref|XP_002171382.1| adenylyl-sulfate kinase [Schizosaccharomyces japonicus yFS275]
 gi|211999429|gb|EEB05089.1| adenylyl-sulfate kinase [Schizosaccharomyces japonicus yFS275]
          Length = 201

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+  +GK+T    L++ L +   + +                  L      FG   +   
Sbjct: 32  GLSASGKSTIACALEQHLLQHGINAYR-----------------LDGDNVRFGLNNDLGF 74

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R +++  +   A +         F D++        S      DS +E   ++ +P
Sbjct: 75  SEKDRNENIRRIGHVAKL---------FADANVVAITSFISPYRKDRDSAREFHEKDGLP 125

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+++  KR
Sbjct: 126 FIEVFVDCPLEVAEKR 141


>gi|183601965|ref|ZP_02963334.1| adenylate kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219682878|ref|YP_002469261.1| adenylate kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190454|ref|YP_002967848.1| adenylate kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241195860|ref|YP_002969415.1| adenylate kinase [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|183218850|gb|EDT89492.1| adenylate kinase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219620528|gb|ACL28685.1| adenylate kinase [Bifidobacterium animalis subsp. lactis AD011]
 gi|240248846|gb|ACS45786.1| adenylate kinase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250414|gb|ACS47353.1| adenylate kinase [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|289178178|gb|ADC85424.1| Adenylate kinase [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793441|gb|ADG32976.1| adenylate kinase [Bifidobacterium animalis subsp. lactis V9]
          Length = 190

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 59/212 (27%), Gaps = 39/212 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G +G GK T   LL             T         +  R  + +              
Sbjct: 7   GPQGVGKGTQAKLLAEHY---GIPTIST--------GDIFRANIKNKTELGKKVLEYTSQ 55

Query: 71  FAAARLDHVENVIRPALMEGK----ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                 +    ++R  L +       +L D +   + A     D       + L      
Sbjct: 56  GFLVPDELTNEIVRDRLAQDDAKNGWIL-DGYPR-NVAQVSALDEILEGLGEQL------ 107

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEK----RRQIFLDI 180
               D  + L  P ++ L+R+  R    E    D  E  +  +  ++K       I+   
Sbjct: 108 ----DAVVALTAPTNVLLERMAKRAK-EEGRADDTPEAIQNRLNTYDKETTPVLDIYQQR 162

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                 +   V+      +++  I+  +   +
Sbjct: 163 -----GKLVTVNGVGEIDAISEEIVKALDAKL 189


>gi|306519123|ref|ZP_07405470.1| putative lantibiotic ABC transporter, ATP-binding protein
          [Clostridium difficile QCD-32g58]
          Length = 197

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G  GAGK+T + +L   L+  +  +   R+P    +      ++ S  +       E ++
Sbjct: 38 GPNGAGKSTTLKMLVGLLRPTDGRIIFDRKPWKRESLAKIGSLIESPALYGNLTAEENLL 97


>gi|24373418|ref|NP_717461.1| ABC transporter ATPase component [Shewanella oneidensis MR-1]
 gi|24347693|gb|AAN54905.1|AE015628_9 ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1]
          Length = 640

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+  G  G GK+T I LL   LQ ++ +V V
Sbjct: 351 IALIGPNGCGKSTLIKLLIEKLQPQSGEVKV 381


>gi|325841818|ref|ZP_08167478.1| putative ferrichrome ABC transporter, ATP-binding protein FhuC
           [Turicibacter sp. HGF1]
 gi|325489848|gb|EGC92200.1| putative ferrichrome ABC transporter, ATP-binding protein FhuC
           [Turicibacter sp. HGF1]
          Length = 251

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCG 58
           +  G   SF G  GAGK+T + ++ R L+R + +V +  +E       E A+ + +L   
Sbjct: 24  IKRGKITSFIGPNGAGKSTVLGMMSRLLKRDSGEVFIDGKELSQWKTNELAKVLAILKQS 83

Query: 59  VDEFGAEAEAIVFAAARLDH 78
                      + A  R  H
Sbjct: 84  NHLSVRLTIRDLVAFGRFPH 103


>gi|322502503|emb|CBZ37586.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1341

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 18/100 (18%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV--LLSC 57
            M +GL     G  G GK+T I +L RF  +R        ++      AE  R++  +L  
Sbjct: 1126 MANGLM----GQTGCGKSTIIQMLARFYDRRSGLICVNGKDLSSLDIAEWRRNISVVLQE 1181

Query: 58   GVDEFGAEAEAIVFA-----------AARLDHVENVIRPA 86
                 G   E I +A           AARL H+   I   
Sbjct: 1182 PNLFSGTVRENIRYAREDATDEEVEEAARLAHIHWEIMKW 1221


>gi|319443049|ref|ZP_07992205.1| putative iron ABC transport system, ATP-binding protein
          [Corynebacterium variabile DSM 44702]
          Length = 276

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          G  G GK+T +  + R +  +  +VH+    G T      R 
Sbjct: 43 GPNGCGKSTLLRAIGRLIPSQGGEVHL----GDTDIGSMKRK 80


>gi|307564557|ref|ZP_07627097.1| uridine kinase [Prevotella amnii CRIS 21A-A]
 gi|307346715|gb|EFN92012.1| uridine kinase [Prevotella amnii CRIS 21A-A]
          Length = 207

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 36/189 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCG 58
           M     I   G  G+GK+T +  +   L      V    +     T   E  R  +    
Sbjct: 1   MKKITIIGIAGGTGSGKSTVVRKIVEALPPDYVAVVPLDSYYNDTTSLTEEERKAI---N 57

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            D   A    ++     + HV       L  G  + C++   S   Y       + + ++
Sbjct: 58  FDHPDAFDWKLL-----IKHVNE-----LRNG--IACEQPTYS---YILSNRLPETIHVE 102

Query: 119 -----------SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----LDYFE 163
                      +L    ++++M D  I +D   D  L R   R ++         +D + 
Sbjct: 103 PKPVIIIEGIMTLNNKKLRDMM-DLKIFVDADSDERLIRNIQRDTIDRGRTVSMVVDRYL 161

Query: 164 RKDVMIHEK 172
           +    +HE+
Sbjct: 162 KVLKPMHEQ 170


>gi|307292979|ref|ZP_07572825.1| aminoglycoside phosphotransferase [Sphingobium chlorophenolicum
           L-1]
 gi|306881045|gb|EFN12261.1| aminoglycoside phosphotransferase [Sphingobium chlorophenolicum
           L-1]
          Length = 486

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 69/213 (32%), Gaps = 50/213 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------CG 58
             ++  G+ G+GK+T   L+   L             G  P A   R  +L         
Sbjct: 310 RLVAIGGLSGSGKSTIAKLIGHSL-------------GEVPGARILRSDVLRKRLAGVPP 356

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                 +A  +   AA    +  +    L  G  ++ D               ++     
Sbjct: 357 ESPLPKDAYTLSANAAIYTELRRLAGHMLYAGHSVVAD------------AVHAKPEERT 404

Query: 119 SLQEISVQEVMPDC---TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            + +++++    D     I LD   D+   RV  R      A         V +  +   
Sbjct: 405 EIHQVALRR---DVRFDGIWLDASPDMLTARVSARTHDASDANG-----AVVELQTRY-- 454

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
              D+        H V++A   ++VAT +++++
Sbjct: 455 ---DLGEID---WHRVNAADDRKTVATQVMDVL 481


>gi|300722432|ref|YP_003711720.1| putative ABC transporter ATP-binding protein [Xenorhabdus
          nematophila ATCC 19061]
 gi|297628937|emb|CBJ89520.1| putative transport protein (ABC superfamily, atp_bind)
          [Xenorhabdus nematophila ATCC 19061]
          Length = 578

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT I +L   L+
Sbjct: 42 GPDGAGKTTLIRMLAGLLK 60


>gi|297155759|gb|ADI05471.1| putative ABC transporter ATPase and permease component
           [Streptomyces bingchenggensis BCW-1]
          Length = 646

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 7/90 (7%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGV 59
           G  ++  G  GAGK+T   LL R        V ++        AE+ R  L        +
Sbjct: 407 GQMVALVGSSGAGKSTIAQLLPRLYDADGGAVRLSDVDVRDLTAESIRRTLGMVTQDGHL 466

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALME 89
                 A  ++   AR +  E  +   L  
Sbjct: 467 FHDSIRANLLL---ARPEAAEEELWEVLRR 493


>gi|293416430|ref|ZP_06659069.1| ATP-binding protein yghS [Escherichia coli B185]
 gi|291431786|gb|EFF04769.1| ATP-binding protein yghS [Escherichia coli B185]
          Length = 237

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|284931379|gb|ADC31317.1| uridine kinase [Mycoplasma gallisepticum str. F]
          Length = 214

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 23/165 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVT-----REPGGTPAAEAARHVLLSCG 58
           + I+  G  G+GKTT    +   ++   N  V         +P    + EA + +     
Sbjct: 7   MIIAISGGSGSGKTTITQSIIAKIKSDTNLKVATVCLDNYYKPFSDLSLEARKKLNYDDP 66

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD----SSYAYQGERDSSQH 114
                 +    + A +    ++  I       +    D+F +        Y+G       
Sbjct: 67  NSFDFDQVYYDLLALSNNQTIKMPIYDYKNYTR---SDQFTEINPSDVILYEGILSLYDP 123

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
             LD L +           + +D P D  L R   R SL  +  +
Sbjct: 124 RILD-LSKFK---------LFIDTPSDERLARRIERDSLERARDI 158


>gi|239927812|ref|ZP_04684765.1| ABC transporter ATP-binding protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291436153|ref|ZP_06575543.1| ABC transporter ATP-binding protein [Streptomyces ghanaensis ATCC
           14672]
 gi|291339048|gb|EFE66004.1| ABC transporter ATP-binding protein [Streptomyces ghanaensis ATCC
           14672]
          Length = 539

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 11/75 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT-------REPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + LL   L+     V VT       +  G        R +L+S  V    
Sbjct: 37  GPNGAGKTTLLRLLAGELKPHGGSVTVTGGLGVMRQFVGSVRDETTVRDLLVSVAVPRVR 96

Query: 64  AEAEAIVFAAARLDH 78
             A A+       +H
Sbjct: 97  EAARAV----DEAEH 107


>gi|221218229|ref|YP_002524256.1| spermidine/putrescine transport system ATP-binding protein
          [Rhodobacter sphaeroides KD131]
 gi|221163256|gb|ACM04222.1| spermidine/putrescine transport system ATP-binding protein
          [Rhodobacter sphaeroides KD131]
          Length = 361

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI+  G  G+GKTT ++LL 
Sbjct: 37 GEFITLLGPSGSGKTTLLNLLA 58


>gi|254427512|ref|ZP_05041219.1| signal recognition particle-docking protein FtsY, putative
           [Alcanivorax sp. DG881]
 gi|196193681|gb|EDX88640.1| signal recognition particle-docking protein FtsY, putative
           [Alcanivorax sp. DG881]
          Length = 394

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 18/153 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L    + +   V +    G T  A A   + +    ++    A+   
Sbjct: 196 GVNGVGKTTTIGKLACRFKAEGKSVMLAA--GDTFRAAAVEQLQVWGERNDIPVVAQH-- 251

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127
             A     V + ++ A   G  IL+ D            R  ++   ++ L ++   +++
Sbjct: 252 TGADSASVVYDAVQAAQSRGADILIAD---------TAGRLHTRGNLMEELTKVTRVMKK 302

Query: 128 VMPDC--TIILDLPVDIGLKRVQNRYSLRESAC 158
           ++PD    ++L L    G   +      R++A 
Sbjct: 303 LIPDAPHEVLLVLDAGTGQNAINQAEQFRDAAG 335


>gi|168334040|ref|ZP_02692259.1| cytidylate kinase [Epulopiscium sp. 'N.t. morphotype B']
          Length = 224

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  GAGK+T    + + L
Sbjct: 1  MIIAIDGPAGAGKSTIAKEIAQKL 24


>gi|163868629|ref|YP_001609838.1| adenylate kinase [Bartonella tribocorum CIP 105476]
 gi|189046005|sp|A9IVZ9|KAD_BART1 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|161018285|emb|CAK01843.1| adenylate kinase [Bartonella tribocorum CIP 105476]
          Length = 192

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 74/215 (34%), Gaps = 39/215 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  GAGK T   +L                       +  R V+      E G +A
Sbjct: 3   VVLLGPPGAGKGTQAKMLTEE-----------YNIPHLSTGDMLREVI--AKETEVGKKA 49

Query: 67  EAIVFAAARL-DHVENVIRPALMEGKILLCDRFLDS----SYAYQGERDSSQHLFLDSLQ 121
           +AI+ + A + D + N I          + DR  ++     +   G   +      ++LQ
Sbjct: 50  KAIISSGALVPDSIVNQI----------VSDRIDEADCINGFILDGYPRTVGQA--EALQ 97

Query: 122 EI-SVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +I   + +  D  I L +  D  ++R++ R      +      +   V   ++  + + +
Sbjct: 98  QILESKNMRLDAVIELCVNEDALIERMERRVQETVAAGGQVRLDDNPVAFAKRLVE-YRE 156

Query: 180 ----IARNQPDR--CHIVDSAHSFQSVATNILNIV 208
               +++   +R    ++D       V   I   +
Sbjct: 157 KTSPLSKFYSERGMLKVIDGMIGIAEVTRIIKGFL 191


>gi|118377189|ref|XP_001021775.1| ABC transporter family protein [Tetrahymena thermophila]
 gi|89303542|gb|EAS01530.1| ABC transporter family protein [Tetrahymena thermophila SB210]
          Length = 1735

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 11/85 (12%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFGAEA 66
            GI GAGKTT   +L   +Q  +  VH+          +A R++         ++   A  
Sbjct: 1328 GINGAGKTTTFKMLAGEIQPSSGSVHIMGYDLSYQINDARRYIGYCPQFDALLENLTARE 1387

Query: 67   EAIVFAAA-------RLDHVENVIR 84
               ++AA        R   V   I+
Sbjct: 1388 HLELYAAIKGIPKDLREQLVSQKIK 1412


>gi|73975424|ref|XP_855725.1| PREDICTED: similar to Guanylate kinase (GMP kinase) isoform 2
          [Canis familiaris]
          Length = 225

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDV-HVTREPGGTPA---AEAARHVLL 55
          M+    +   G  GAGK+T +  LL+       + V H TR+P         E    VLL
Sbjct: 1  MSGPRPVVLSGPSGAGKSTLLKRLLQEHGSIFGFSVSHTTRDPRPGEENGKGELGPQVLL 60

Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
                      +  F A        V++  +  G  +
Sbjct: 61 QGRALRAQPLWLSGPFPADYYFVTREVMQRDIAAGDFI 98


>gi|56419729|ref|YP_147047.1| signal recognition particle GTPase [Geobacillus kaustophilus
           HTA426]
 gi|56379571|dbj|BAD75479.1| signal recognition particle GTPase (docking protein) [Geobacillus
           kaustophilus HTA426]
          Length = 328

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    +  G + 
Sbjct: 125 ILFVGVNGVGKTTTIGKLAHKLKSEGKSVLLAA--GDTFRAGAIEQ--LEAWGERVGVDV 180

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
                 +     + + I+ A   G  +LLCD
Sbjct: 181 IKQAAGSDPAAVMYDAIQAAKARGVDVLLCD 211


>gi|15606250|ref|NP_213628.1| cell division protein FtsY [Aquifex aeolicus VF5]
 gi|6225393|sp|O67066|FTSY_AQUAE RecName: Full=Cell division protein ftsY homolog
 gi|2983449|gb|AAC07030.1| cell division protein FtsY [Aquifex aeolicus VF5]
          Length = 461

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT I  L   L++K   V +        AA     V       +   + E   
Sbjct: 267 GVNGSGKTTTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIVKKEE--- 323

Query: 71  FAAARLDHVENVIRPALMEGK-ILLCD 96
             +     V   ++ A  EG  ++L D
Sbjct: 324 -GSDPGAVVYEGMKKAKEEGYEVVLVD 349


>gi|319953283|ref|YP_004164550.1| guanylate kinase [Cellulophaga algicola DSM 14237]
 gi|319421943|gb|ADV49052.1| Guanylate kinase [Cellulophaga algicola DSM 14237]
          Length = 194

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 12/105 (11%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREP--GGTPAAEAARHVL 54
           M  G  I F    G+GKTT +  L   L++ + ++      T  P  G     E    + 
Sbjct: 1   MKGGKLIIFSAPSGSGKTTIVRHL---LEKNDLNLAFSISATSRPRRGKEKNGEHYYFIS 57

Query: 55  LSC---GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           LS     +          V+       ++  +     EGK ++ D
Sbjct: 58  LSEFKRHIKNDDFLEWEEVYRDNFYGTLKTEVERLWAEGKNVIFD 102


>gi|301310926|ref|ZP_07216855.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3]
 gi|300830989|gb|EFK61630.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3]
          Length = 223

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
           G FI+ +G  G+GKTT +S+L   L+
Sbjct: 33 KGEFIAIKGPSGSGKTTLLSILGTILR 59


>gi|301027167|ref|ZP_07190536.1| adenylylsulfate kinase [Escherichia coli MS 69-1]
 gi|300395199|gb|EFJ78737.1| adenylylsulfate kinase [Escherichia coli MS 69-1]
          Length = 201

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL      +G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRYGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|238787019|ref|ZP_04630819.1| Predicted kinase [Yersinia frederiksenii ATCC 33641]
 gi|238724807|gb|EEQ16447.1| Predicted kinase [Yersinia frederiksenii ATCC 33641]
          Length = 47

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
          + I F G+ G GK+T   LL   L+ 
Sbjct: 1  MLIIFSGLPGTGKSTIAHLLAERLKA 26


>gi|254505300|ref|ZP_05117449.1| ABC transporter, ATP-binding protein, putative [Labrenzia
           alexandrii DFL-11]
 gi|222436198|gb|EEE42879.1| ABC transporter, ATP-binding protein, putative [Labrenzia
           alexandrii DFL-11]
          Length = 204

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 28/154 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLL 55
            G+   F G  G GKTT I +L   L       +     V    E          +   L
Sbjct: 30  RGMIYGFLGPNGCGKTTAIRMLTGLLTPTQGSVEVLGLSVPKDAEALKYKIGYMTQAFSL 89

Query: 56  SCGVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSS 112
              +           V+   R    E +           + DR+  +     + G+    
Sbjct: 90  YGDLTVLENLNFMGTVYGLTRAQRKERIAE---------VMDRYELTQLGDRFAGKMSGG 140

Query: 113 QHLFLDSLQEISVQEVMPDCTIILD-----LPVD 141
           Q   L +L    +    P   + LD     +  +
Sbjct: 141 QRQRL-ALAAAVLHG--PQL-LFLDEPTSAVDPE 170


>gi|222149627|ref|YP_002550584.1| ABC transporter nucleotide binding/ATPase protein
          (sorbitol/mannitol) [Agrobacterium vitis S4]
 gi|221736609|gb|ACM37572.1| ABC transporter nucleotide binding/ATPase protein
          (sorbitol/mannitol) [Agrobacterium vitis S4]
          Length = 332

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F+ F G  G GK+T + L+ 
Sbjct: 26 INNGEFVVFVGPSGCGKSTLLRLIA 50


>gi|222100122|ref|YP_002534690.1| Signal recognition particle protein [Thermotoga neapolitana DSM
           4359]
 gi|221572512|gb|ACM23324.1| Signal recognition particle protein [Thermotoga neapolitana DSM
           4359]
          Length = 433

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 15/130 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L + L+++  +  +       PAA     ++            +   
Sbjct: 106 GLQGSGKTTTCAKLAKLLKKEGRNPLLVAADLYRPAA--VDQLVKLGNQIGVNVVHD--- 160

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
           +  + ++ V+  I+ A   GK +L    +D+       R       +  L+EI    + P
Sbjct: 161 YNKSPVEIVKEGIQEAERTGKDVLI---VDT-----AGRLHIDEDMMRELEEI-KAILNP 211

Query: 131 DCTIILDLPV 140
           D  I+L +  
Sbjct: 212 D-EILLVVDA 220


>gi|151941519|gb|EDN59882.1| uridylate kinase [Saccharomyces cerevisiae YJM789]
 gi|323304111|gb|EGA57889.1| Ura6p [Saccharomyces cerevisiae FostersB]
          Length = 204

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 44/214 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L +      L      +   +   G+   E  ++ +      +   +
Sbjct: 23  GGPGAGKGTQCEKLVKDYSFVHLSA-GDLLRAEQGRAGSQYGELIKNCIKEG---QIVPQ 78

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSS-YAYQGERDSSQHLFLDSLQEI 123
              +         + N I   +   K   L D F      A   ERD  +  F+      
Sbjct: 79  EITL-------ALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFI------ 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFL 178
                     +  D P DI L+R+  R   S R    ++  +++     E      + F 
Sbjct: 126 ----------LFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFE 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                   +   V    S + V  ++ + + + +
Sbjct: 176 T-----KSKVVRVRCDRSVEDVYKDVQDAIRDRL 204


>gi|134102494|ref|YP_001108155.1| signal recognition particle GTPase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291004115|ref|ZP_06562088.1| signal recognition particle protein [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133915117|emb|CAM05230.1| signal recognition particle GTPase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 518

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 35/158 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------AAEAARHVLLSC----G 58
           G++G+GKTT    L R+LQ + +   +       P          E A   + +     G
Sbjct: 107 GLQGSGKTTLAGKLARWLQGQGHTPMLVAADLQRPNAVNQLQVVGERAGVAVFAPEPGNG 166

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           V +    +   +  A R  H             I++ D            R       + 
Sbjct: 167 VGDPVDVSRRSIDEARRAQH------------DIVIVD---------TAGRLGIDQEMMQ 205

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
              +I    V PD T+ + +   IG   V    + R+ 
Sbjct: 206 QAADI-RDAVKPDETLFV-VDAMIGQDAVSTAEAFRDG 241


>gi|119488720|ref|ZP_01621729.1| hypothetical protein L8106_23181 [Lyngbya sp. PCC 8106]
 gi|119455143|gb|EAW36284.1| hypothetical protein L8106_23181 [Lyngbya sp. PCC 8106]
          Length = 83

 Score = 36.5 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          ++ G  I   GI G+GKTT +  ++R L+++   V V+R
Sbjct: 37 LSRGGLIVLSGIVGSGKTTLLLQVQRELKQE-AKVVVSR 74


>gi|323137224|ref|ZP_08072303.1| signal recognition particle-docking protein FtsY [Methylocystis sp.
           ATCC 49242]
 gi|322397582|gb|EFY00105.1| signal recognition particle-docking protein FtsY [Methylocystis sp.
           ATCC 49242]
          Length = 353

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 15/121 (12%)

Query: 6   FISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI    G+ G+GKTT I+ L      +   V +    G T  A A   + +        A
Sbjct: 140 FIVLVVGVNGSGKTTTIAKLASKWTGEGKKVVLAA--GDTFRAAAVEQLRIWGA--RLDA 195

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           E  A    A       + I+ A   G  I+L D            R  ++   +  L++I
Sbjct: 196 EVVAGNEGADAAGLAFDAIKRAGESGADIMLMD---------TAGRLQNRAELMAELEKI 246

Query: 124 S 124
            
Sbjct: 247 V 247


>gi|311696381|gb|ADP99254.1| signal recognition particle-docking protein FtsY [marine bacterium
           HP15]
          Length = 397

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 202 GVNGVGKTTTIGKLTKKFQNEGKSVMLAA--GDTFRAAAVEQLQVWGERNKVPVVAQH-- 257

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I+ A   G  +++ D
Sbjct: 258 TGADSASVIFDAIQSAKSRGVDVVIAD 284


>gi|269103876|ref|ZP_06156573.1| signal recognition particle receptor protein FtsY [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268163774|gb|EEZ42270.1| signal recognition particle receptor protein FtsY [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 462

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 14/123 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 265 GVNGVGKTTTIGKLAKKFQSEGKSVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 320

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128
             A     + + I  A  +   ++         A    R  ++   ++ L++I   ++++
Sbjct: 321 TGADSASVIFDAIESAKAKNIDVI--------IADTAGRLQNKANLMEELRKIVRVMKKI 372

Query: 129 MPD 131
            PD
Sbjct: 373 DPD 375


>gi|266620771|ref|ZP_06113706.1| sugar ABC transporter, ATP-binding protein [Clostridium hathewayi
          DSM 13479]
 gi|288867634|gb|EFC99932.1| sugar ABC transporter, ATP-binding protein [Clostridium hathewayi
          DSM 13479]
          Length = 358

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G FI F G  G GKTT I ++
Sbjct: 21 KGEFIVFLGPSGCGKTTTIRMI 42


>gi|239942566|ref|ZP_04694503.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239989027|ref|ZP_04709691.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291446025|ref|ZP_06585415.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|291348972|gb|EFE75876.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptomyces roseosporus NRRL 15998]
          Length = 323

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 59/201 (29%), Gaps = 47/201 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAE---A 66
           G  GAGKTT + +L   L+       V         A+A R  + L+        +    
Sbjct: 39  GPNGAGKTTAVRMLATLLRPDGGSARV-FGKDVVKDADAVRSRVSLTGQYASVDEDLTGM 97

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA------YQGERDSSQHLFLDSL 120
           E +V  A  L H     +PA       L D F  S  A      Y G       +    L
Sbjct: 98  ENLVLLARLLGHS----KPAARNRADQLLDGFGLSEAAGKQVKNYSGGMRRRIDIAASIL 153

Query: 121 QEISVQEVMPDCTIILDLPVDIGLK-RVQNRYSLRESACLDYFERKDVMIHEKRRQI--- 176
                    PD  + LD     GL  R +N+      A                      
Sbjct: 154 N-------TPDL-LFLD-EPTTGLDPRSRNQVWDIVRAV--------------VAHGTTV 190

Query: 177 -----FLDIARNQPDRCHIVD 192
                +LD A     R  ++D
Sbjct: 191 LLTTQYLDEADQLASRIAVID 211


>gi|225166464|ref|ZP_03728113.1| hemin ABC transporter ATP binding protein [Opitutaceae bacterium
          TAV2]
 gi|224799295|gb|EEG17873.1| hemin ABC transporter ATP binding protein [Opitutaceae bacterium
          TAV2]
          Length = 290

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARH 52
            G F +  G  GAGK+T + +L   L+          R     PA E AR 
Sbjct: 43 RRGRFTAILGPNGAGKSTLLRVLSAELKPDAGTVALDERSLAEWPALELARR 94


>gi|224088549|ref|XP_002308469.1| predicted protein [Populus trichocarpa]
 gi|222854445|gb|EEE91992.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G GKTT  + L  +L+++     +       PAA     +++           
Sbjct: 191 ILLAGLQGVGKTTICAKLANYLKKQGKSCMLVAGDVYRPAA--IDQLVILGEQVGVSVYT 248

Query: 67  E 67
           E
Sbjct: 249 E 249


>gi|212638918|ref|YP_002315438.1| cytidylate kinase [Anoxybacillus flavithermus WK1]
 gi|226723074|sp|B7GHN1|KCY_ANOFW RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|212560398|gb|ACJ33453.1| Cytidylate kinase [Anoxybacillus flavithermus WK1]
          Length = 225

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 75/239 (31%), Gaps = 41/239 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR--------EPGGTPAAEAARH 52
           M   + I+ +G   AGK+T    L   L     D             + G     E    
Sbjct: 1   MEKKISIAIDGPAAAGKSTVAKRLAEALSYVYIDTGAMYRALTYCALQRGVDVHNEKQLM 60

Query: 53  VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
            +L     E        +  A   ++V   IR           D  + ++ +Y  +  + 
Sbjct: 61  NVLHDTYIELKPSPSGQLVFAN-GENVTEAIRTN---------D--VTNNVSYVAKHPAV 108

Query: 113 QHLFLDSLQEISVQE------------VMPD--CTIILDLPVDIGLKRVQNRYSLRESAC 158
           +   +   +E+                V+P     I L   V+   KR      LR    
Sbjct: 109 REEMVKRQRELGQHGGVVMDGRDIGTHVLPHAEVKIFLLASVEERAKRRHEENVLR--GI 166

Query: 159 LDYFERKDVMIHEKRRQIFLDIA----RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              FE+    I  +R QI  + A    +   D   I  ++ S   V   I+ IV E V+
Sbjct: 167 PSDFEQLKEEI-ARRDQIDSERAVAPLKKAEDAIEIDTTSLSIDEVVDRIMCIVQERVE 224


>gi|221052240|ref|XP_002257696.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
           knowlesi strain H]
 gi|193807527|emb|CAQ38032.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
           knowlesi strain H]
          Length = 193

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 36/156 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------VD 60
           I   G+ G GKTT    L   L ++       +E     +A   +H+ LS         +
Sbjct: 7   IIVTGVPGVGKTTLCEELVEILNKQ------LKENQQAESASQMKHLNLSKVIKEERLYE 60

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           EF  + +A ++++  ++  E + +  L  G  ++               D     FLD  
Sbjct: 61  EFDDQLDASIYSSDMVN--EKLEKLKLENGGYII---------------DFHDVDFLDEK 103

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           + I       D   +L    +   +R++ R    E 
Sbjct: 104 ELI-------DHIFLLTASTNKLYERLEKRNYSEEK 132


>gi|116250521|ref|YP_766359.1| alpha-glucoside transport ATP-binding protein [Rhizobium
          leguminosarum bv. viciae 3841]
 gi|115255169|emb|CAK06243.1| putative alpha-glucoside transport ATP-binding protein [Rhizobium
          leguminosarum bv. viciae 3841]
          Length = 362

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|73668009|ref|YP_304024.1| signal recognition particle-docking protein FtsY [Methanosarcina
           barkeri str. Fusaro]
 gi|72395171|gb|AAZ69444.1| signal recognition particle-docking protein FtsY [Methanosarcina
           barkeri str. Fusaro]
          Length = 422

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 68/206 (33%), Gaps = 37/206 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F GI G GKTT I+ +   L + +Y V +    G T  A A     L    D  G + 
Sbjct: 224 IVFVGINGTGKTTSIAKITHRLLKSDYSVVLAA--GDTFRAGAIDQ--LGIHADRLGVKM 279

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 A     + + ++ A       +L D            R  +    +  +++I  
Sbjct: 280 IKHQPGADPAAVIYDAVQYAKGHKIDFVLSD---------TAGRMHTNLNLMSQMEKI-C 329

Query: 126 QEVMPDCTIILD--LPVDIGLKRVQN-------------RYSLRESAC----LDYFERKD 166
           +   PD  I +D  +  +  ++R                +            + Y   K 
Sbjct: 330 RVSTPDLIIFVDEAVAGNDAVERAAQFNEAVPIDGSILTKIDADAKGGAAISIAYITGKP 389

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVD 192
           ++      Q + D+ +  P+    +D
Sbjct: 390 ILFFG-IGQGYEDLKKFDPEWF--ID 412


>gi|120599195|ref|YP_963769.1| ABC transporter ATPase [Shewanella sp. W3-18-1]
 gi|120559288|gb|ABM25215.1| ABC transporter related [Shewanella sp. W3-18-1]
          Length = 641

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+  G  G GK+T I LL   LQ ++ +V V
Sbjct: 351 IALIGPNGCGKSTLIKLLIEKLQPQSGEVKV 381


>gi|146296894|ref|YP_001180665.1| cytidylate kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|166220114|sp|A4XKN9|KCY_CALS8 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|145410470|gb|ABP67474.1| cytidylate kinase [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 226

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 77/247 (31%), Gaps = 71/247 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL-----------QRKNYDVH-----------VTREPGGT 44
           I+ +G  GAGK+T   LL + L           +     V            +      T
Sbjct: 6   IAIDGPAGAGKSTISKLLAKKLGYIHIDTGAMYRAIGLKVLNSNIKSNEVEKILEVLDNT 65

Query: 45  PAAEAARH----VLLSCGVDEFGAEAEAIVFAAARLDHVENV------IRPALMEGKILL 94
                       VLL            ++   A+ +  ++ V      I+  L + K ++
Sbjct: 66  DIQIKIVAGSQLVLLDGEDVTEKIRQPSVSMYASDVSKIKEVREKLVKIQQDLAKQKGVI 125

Query: 95  CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRY- 151
            D                    L            PD    I L        +R + R+ 
Sbjct: 126 MD------------GRDIGTYVL------------PDAELKIFL---TATAEERAKRRFL 158

Query: 152 SLRESA-CLDYFERKDVMIHEKRRQIFLDIARNQPDRC----HIVDSA-HSFQSVATNIL 205
            L+E    +DY++  D +       +  ++A   P R      ++DS   + + V   +L
Sbjct: 159 ELKEKGYEVDYYQLLDEIKQRDLNDMTRELA---PLRVAEDAIVIDSTNLTIEEVLQKVL 215

Query: 206 NIVWELV 212
            + ++++
Sbjct: 216 ELFYKVI 222


>gi|319943514|ref|ZP_08017796.1| polyphosphate kinase 2 [Lautropia mirabilis ATCC 51599]
 gi|319743329|gb|EFV95734.1| polyphosphate kinase 2 [Lautropia mirabilis ATCC 51599]
          Length = 427

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 35/123 (28%), Gaps = 31/123 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P  T   +                  
Sbjct: 205 ILFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTDTERGQW----------------- 247

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +    ++H+          G+I+L DR   S Y   G          +  QE   Q
Sbjct: 248 ----YFQRYIEHLPT-------HGEIVLFDR---SWYNRAGVERVMGFCTTEEYQEFMKQ 293

Query: 127 EVM 129
              
Sbjct: 294 APE 296


>gi|319653265|ref|ZP_08007367.1| adenylyl-sulfate kinase [Bacillus sp. 2_A_57_CT2]
 gi|317395186|gb|EFV75922.1| adenylyl-sulfate kinase [Bacillus sp. 2_A_57_CT2]
          Length = 197

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 20/96 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           ++   I F G+ G+GKTT  + L+  L  K                      +L      
Sbjct: 25  HNSKIIWFTGLSGSGKTTIANELEDILHSKGISTF-----------------ILDGDNIR 67

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL 94
            G   +       R +++     V +  +  G ++L
Sbjct: 68  QGLNNDLGFSQEDRKENIRRIGEVAKLFVDSGIVVL 103


>gi|314963658|gb|EFT07758.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL082PA1]
          Length = 267

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V   RE  G         +    S     
Sbjct: 44  GPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRREGSGYRAHIGYVPQECTWSPSWP- 102

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D  +   +A+Q     S         
Sbjct: 103 ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSDLNV-GQFAHQPIGTLSGGQKRRVFL 155

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 156 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 192


>gi|313632902|gb|EFR99845.1| deoxyguanosine kinase [Listeria seeligeri FSL N1-067]
 gi|313637502|gb|EFS02938.1| deoxyguanosine kinase [Listeria seeligeri FSL S4-171]
          Length = 215

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 82/233 (35%), Gaps = 52/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-VLLSCGVDEFGAE 65
           I   G+ GAGK+++  L+              RE G  P  E+ +   +L    D    +
Sbjct: 10  IVLAGMIGAGKSSYTELIA-------------RELGTKPFYESIKDNRILEMFYD--DPK 54

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-----SSYAYQGERDSSQHLF--LD 118
             A       L+     I+ AL +   +L DR +      +   Y+    S   +   LD
Sbjct: 55  RWAFALQIYFLNTRFRSIKAALTDQNNVL-DRSIYEDALFTQINYEEGNISEPEMDTYLD 113

Query: 119 SLQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-----ACLDYFERKDVM 168
            L  +      + +  PD  I L   +D  L+R+  R    E        LDY++     
Sbjct: 114 LLDNMMEELEFMPKKAPDLLIYLRGGLDTVLQRISLRGRPYEQIQDNPGLLDYYKH---- 169

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV-------ATNILNIVWELVQK 214
           +H +    F   A        +++       V       A  ++ ++ E +++
Sbjct: 170 LHSRYDSWF---ASYDKSDTLVIN----IDEVDINKPTDAELVMKLIKEKLKR 215


>gi|312793882|ref|YP_004026805.1| ABC transporter-like protein [Caldicellulosiruptor kristjanssonii
          177R1B]
 gi|312181022|gb|ADQ41192.1| ABC transporter related protein [Caldicellulosiruptor
          kristjanssonii 177R1B]
          Length = 278

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARH 52
           G F++  G+ G+GK+T   L+   L  +  DV V       T      R 
Sbjct: 34 RGEFVAILGLNGSGKSTLAKLINGLLIPEKGDVIVDGMNTKDTEKIWDIRR 84


>gi|315047881|ref|XP_003173315.1| leptomycin B resistance protein pmd1 [Arthroderma gypseum CBS 118893]
 gi|311341282|gb|EFR00485.1| leptomycin B resistance protein pmd1 [Arthroderma gypseum CBS 118893]
          Length = 1277

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFL 28
            + SG F++  G  G GK+T ++LL+RF 
Sbjct: 1058 IKSGQFVALVGPSGCGKSTVLALLERFF 1085


>gi|307721339|ref|YP_003892479.1| ABC transporter-like protein [Sulfurimonas autotrophica DSM
          16294]
 gi|306979432|gb|ADN09467.1| ABC transporter related protein [Sulfurimonas autotrophica DSM
          16294]
          Length = 220

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          N G  I  +G+ G+GK+T +SL+   L+  + DV V
Sbjct: 26 NEGELIVLKGVSGSGKSTILSLIAGLLKPTSGDVLV 61


>gi|299770176|ref|YP_003732202.1| ABC transporter ATP-binding protein [Acinetobacter sp. DR1]
 gi|298700264|gb|ADI90829.1| ABC transporter ATP-binding protein [Acinetobacter sp. DR1]
          Length = 610

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           +G  I+  G  G GK+T + LL RF + +   + + R P       + R 
Sbjct: 394 AGKIIAIVGPTGHGKSTMVQLLTRFYEPQQGGIFLDRYPIQNIHLASLRQ 443


>gi|297530630|ref|YP_003671905.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           C56-T3]
 gi|297253882|gb|ADI27328.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           C56-T3]
          Length = 328

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    +  G + 
Sbjct: 125 ILFVGVNGVGKTTTIGKLAHKLKSEGKSVLLAA--GDTFRAGAIEQ--LEAWGERVGVDV 180

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
                 +     + + I+ A   G  +LLCD
Sbjct: 181 IKQAAGSDPAAVMYDAIQAAKARGVDVLLCD 211


>gi|293376815|ref|ZP_06623035.1| deoxynucleoside kinase [Turicibacter sanguinis PC909]
 gi|292644567|gb|EFF62657.1| deoxynucleoside kinase [Turicibacter sanguinis PC909]
          Length = 219

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 62/224 (27%), Gaps = 46/224 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFGAE 65
           I+  G  G GK+T    L   L     D   + E   G P  E           + +   
Sbjct: 16  ITIAGTVGVGKSTLTKKLAETL-----DFRTSFEKVDGNPYLEKYYQ-----DFNRWSFH 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-------GERDSSQHLFLD 118
            +   F A R        +     G   + DR +    A         G          +
Sbjct: 66  LQIY-FLAERF----KEQKRMFQYGGGFIQDRSIYEDTAIFAQMNYDNGSMSKEDFDTYN 120

Query: 119 SL-QEISV--QEVMPDCTIIL--DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
           SL  ++ +      P+  I L  D+   +G  R+  R    E           V      
Sbjct: 121 SLFNDMVMTPYFPHPNLIIYLEGDIDEIVG--RIGTRGRQMEIDTP-------VEYWYNL 171

Query: 174 RQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIV 208
            + + D   N           +   +V+   S   +   I  ++
Sbjct: 172 HRRYEDWIENFTSAPVLRLNINEYDLVNDEKSIDYILAKIGRVL 215


>gi|268607882|ref|ZP_06141613.1| ferric enterobactin transport ATP-binding protein fepC
          [Ruminococcus flavefaciens FD-1]
          Length = 371

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G  ++  G  GAGK+T +  L R L+     V +
Sbjct: 30 RGKILTLIGPNGAGKSTLLKTLCRQLEPVGGTVFI 64


>gi|240167876|ref|ZP_04746535.1| arginine/ornithine transport system ATPase [Mycobacterium kansasii
           ATCC 12478]
          Length = 345

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEF 62
           G+ G GK+T I  L  +L  + + V  +  +P     GG+   +  R   L+   D +
Sbjct: 79  GVPGVGKSTAIEALGMYLIDQGHKVAVLAVDPSSTRTGGSILGDKTRMARLAMHPDAY 136


>gi|296120529|ref|YP_003628307.1| ABC transporter [Planctomyces limnophilus DSM 3776]
 gi|296012869|gb|ADG66108.1| ABC transporter related protein [Planctomyces limnophilus DSM 3776]
          Length = 308

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 22/165 (13%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVD 60
           FI   G  G+GKTT + +L   L     + +V  +   T   E  R ++          D
Sbjct: 32  FI---GPNGSGKTTTMRMLATLLNPDYGEAYVCGKSIYTNQ-EEIRRLVGYMPDFFGVYD 87

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDS 119
           +         FAA+    +    R  + E K+ L D  F   +   Q  R  +Q + L  
Sbjct: 88  DMTVLEYLEFFAAS--YRISGPARRKICEEKLELVDMSFKRDAMVNQLSRGQTQRIGLA- 144

Query: 120 LQEISVQEVMPDCTIILDLPVDIGL---KRVQNRYSLRESACLDY 161
              + + E      ++LD     GL    R++ R  L+    L+ 
Sbjct: 145 --RVLLHEPQ---VLLLD-EPASGLDPRARIEIRNLLKRLGELNK 183


>gi|227327222|ref|ZP_03831246.1| Type I secretion ATP-binding protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 615

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 10/41 (24%)

Query: 7   ISFE----------GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+FE          G  G+GK+T   LL   +      V +
Sbjct: 353 ITFELAPGDVLGVLGPSGSGKSTLARLLVAAMPALGGKVRL 393


>gi|195483802|ref|XP_002090439.1| GE13115 [Drosophila yakuba]
 gi|194176540|gb|EDW90151.1| GE13115 [Drosophila yakuba]
          Length = 4018

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 37/117 (31%), Gaps = 24/117 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
            +   G  G GK+T +++LK+ L      VH       +      R   L     ++    
Sbjct: 1907 VVLVGPPGCGKSTIMAILKQALSGTQLKVHTISPKSMSRIQLLGR---LDADTRQWQDG- 1962

Query: 67   EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +   A     V     P+      ++CD              S    ++++L  +
Sbjct: 1963 -VLTHTA-----VAVNQEPS-QVHSWIVCD-------------GSIDPEWIEALNSV 1999


>gi|149911081|ref|ZP_01899708.1| adenylylsulfate kinase [Moritella sp. PE36]
 gi|149805831|gb|EDM65820.1| adenylylsulfate kinase [Moritella sp. PE36]
          Length = 211

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +  Y  +                 LL      FG   + 
Sbjct: 43  FTGLSGSGKSTVAGALENELHKAGYHTY-----------------LLDGDNVRFGLCGDL 85

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     V +  +  G I+L 
Sbjct: 86  GFSDDDRKENIRRVGEVAKLMVDAGVIVLT 115


>gi|254302286|ref|ZP_04969644.1| guanylate kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
          10953]
 gi|148322478|gb|EDK87728.1| guanylate kinase [Fusobacterium nucleatum subsp. polymorphum ATCC
          10953]
          Length = 185

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|146417956|ref|XP_001484945.1| hypothetical protein PGUG_02674 [Meyerozyma guilliermondii ATCC
          6260]
          Length = 186

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 7  ISFEGIEGAGKTTHIS-LLKRFLQRKNYDV-HVTREPGGTP 45
          I   G  G GK+T +  LL  +  +  + V H TR P    
Sbjct: 6  IVISGPSGTGKSTLLKRLLAEYPDKFGFSVSHTTRSPRDGE 46


>gi|123443808|ref|YP_001007779.1| iron-siderophore transport system, ATP-binding component [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090769|emb|CAL13650.1| iron-siderophore transport system, ATP-binding component [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 282

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 24/147 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGVDE 61
           G F    G    GK+T +  L R L+ +   V +  +          ARH+ LL      
Sbjct: 49  GEFTVIVGPNACGKSTLLRALSRLLKPQAGQVILDGKNIASLDTRHVARHLGLLPQSSQA 108

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKIL-----------LCDRFLDSSYAYQGERD 110
               +   + A  R  H + + +  L + + +           L DR +D+         
Sbjct: 109 PDGISVLDLVARGRYPHQKLLQQWTLADKQAVSDAMQATGVSELADRSVDAL-----SGG 163

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILD 137
             Q +++  +  ++ Q  +    ++LD
Sbjct: 164 QRQRVWIAMV--LAQQTPL----LLLD 184


>gi|121610332|ref|YP_998139.1| arginine/ornithine transport system ATPase [Verminephrobacter
           eiseniae EF01-2]
 gi|121554972|gb|ABM59121.1| LAO/AO transport system ATPase [Verminephrobacter eiseniae EF01-2]
          Length = 343

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEF 62
           F G+ G GK+T I  L  +L  +   V  +T +P     GG+   +  R   LS     F
Sbjct: 54  FSGVPGVGKSTLIEALGLYLIDQGRRVAVLTIDPSSSVSGGSILGDKTRMEKLSMHEQAF 113


>gi|146302739|ref|YP_001197330.1| adenylylsulfate kinase [Flavobacterium johnsoniae UW101]
 gi|146157157|gb|ABQ08011.1| adenylylsulfate kinase [Flavobacterium johnsoniae UW101]
          Length = 174

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          L I F G+ G+GKTT    ++  L   NY V
Sbjct: 2  LLIQFTGLSGSGKTTLAENVRHLLIENNYKV 32


>gi|118394340|ref|XP_001029545.1| KTI12 protein, putative [Tetrahymena thermophila]
 gi|89283782|gb|EAR81882.1| KTI12 protein, putative [Tetrahymena thermophila SB210]
          Length = 276

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I F GI G+GKTT    +K +L++K+   V    E             +L     E   
Sbjct: 3  LIVFCGIPGSGKTTRALQIKEYLEQKHKCQVVHLNEE------------ILQMEKKEVYK 50

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
          + +A  FA      + + +   +    +++ D
Sbjct: 51 DFQAEKFARGF---LRSNVEKNIAGNTVVILD 79


>gi|50122462|ref|YP_051629.1| adenylylsulfate kinase [Pectobacterium atrosepticum SCRI1043]
 gi|49612988|emb|CAG76439.1| adenylylsulfate kinase [Pectobacterium atrosepticum SCRI1043]
          Length = 205

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ I F G+ G+GK+T    L++ L ++    +                 LL      
Sbjct: 30  HQGVVIWFTGLSGSGKSTLAGALEQALHQRGVSTY-----------------LLDGDNVR 72

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +       R +++     V +  +  G ++L 
Sbjct: 73  HGLCRDLGFTDDDRRENIRRVGEVAKLMVDAGLVVLT 109


>gi|327188937|gb|EGE56129.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli CNPAF512]
          Length = 259

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG F+S  G  G+GK+T + LL + L+
Sbjct: 30 SGEFVSIVGPSGSGKSTVLRLLTQALR 56


>gi|325845714|ref|ZP_08168997.1| ABC transporter transmembrane region [Turicibacter sp. HGF1]
 gi|325488315|gb|EGC90741.1| ABC transporter transmembrane region [Turicibacter sp. HGF1]
          Length = 585

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           I+  G  GAGKTT ++LL RF +     +++     GTP  +  R  +  
Sbjct: 376 IAIVGPTGAGKTTLVNLLMRFNEINGGAIYI----DGTPINQLTRENIHD 421


>gi|325067024|ref|ZP_08125697.1| signal recognition particle protein [Actinomyces oris K20]
          Length = 158

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L R+L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGRWLRDQGKRVLLV 134


>gi|322412628|gb|EFY03536.1| ferrichrome transport ATP-binding protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 273

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 2/78 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCGVD 60
            G   +  G  G+GK+T + LL + L  K   V + +E     + +  A +  ++     
Sbjct: 32  KGKITTIIGANGSGKSTLLHLLTKNLPVKQGQVWLEQEVLDKISLKAFAKKVAVVHQYHR 91

Query: 61  EFGAEAEAIVFAAARLDH 78
                  + + A AR  H
Sbjct: 92  IVDDLTVSELVAMARRAH 109


>gi|312877806|ref|ZP_07737756.1| ABC transporter related-protein [Caldicellulosiruptor
          lactoaceticus 6A]
 gi|311795432|gb|EFR11811.1| ABC transporter related-protein [Caldicellulosiruptor
          lactoaceticus 6A]
          Length = 278

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARH 52
           G F++  G+ G+GK+T   L+   L  +  DV V       T      R 
Sbjct: 34 RGEFVAILGLNGSGKSTLAKLINGLLIPEKGDVIVDGMNTKDTEKIWDIRR 84


>gi|291059681|gb|ADD72416.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema
          pallidum subsp. pallidum str. Chicago]
          Length = 829

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRK 31
          + I+ +G  G+GK++   LL   L  +
Sbjct: 1  MIIALDGPAGSGKSSVCRLLASRLGAQ 27


>gi|260682195|ref|YP_003213480.1| putative lantibiotic ABC transporter ATP-binding protein
           [Clostridium difficile CD196]
 gi|260685794|ref|YP_003216927.1| putative lantibiotic ABC transporter ATP-binding protein
           [Clostridium difficile R20291]
 gi|260208358|emb|CBA60849.1| putative lantibiotic ABC transporter, ATP-binding protein
           [Clostridium difficile CD196]
 gi|260211810|emb|CBE02194.1| putative lantibiotic ABC transporter, ATP-binding protein
           [Clostridium difficile R20291]
          Length = 257

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T + +L   L+  +  +   R+P    +      ++ S  +       E ++
Sbjct: 61  GPNGAGKSTTLKMLVGLLRPTDGRIIFDRKPWKRESLAKIGSLIESPALYGNLTAEENLL 120


>gi|257875058|ref|ZP_05654711.1| deoxyguanosine kinase [Enterococcus casseliflavus EC20]
 gi|257809224|gb|EEV38044.1| deoxyguanosine kinase [Enterococcus casseliflavus EC20]
          Length = 240

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 79/237 (33%), Gaps = 50/237 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I+  G  GAGK++    L + +  K         P      +     L     + +  
Sbjct: 2   LLIA--GTIGAGKSSLTDFLSKEMASK---------PFYENVEDNDVLPLFYSNPERYAF 50

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFL-----D 118
             +      + L      +R AL     ++ DR +   S  +    D  +   +     D
Sbjct: 51  LLQIFFLNKSFL-----GMREALSNDDNVI-DRSIYEDSLMFHLNADLGRIAPMEVEQYD 104

Query: 119 SLQEISVQEVM-------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
           +L    ++E+        PD  + + + +D  ++R+  R    E    D           
Sbjct: 105 NLLNTMLRELEESAPLKHPDLMVHIKVSLDTMIERINKRGRSYEQIANDP---------- 154

Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVA-TNILNIVWELVQKRVSPL 219
                + ++ +   +            +D       VA  + L ++ E++Q++++ +
Sbjct: 155 TLYDYYKELNQRYDEWYENFDVCPKMQIDGDQ-LDFVANEDNLMVILEMIQEKLAEV 210


>gi|256752969|ref|ZP_05493794.1| cytidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748152|gb|EEU61231.1| cytidylate kinase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 189

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  GAGK+T    L + L     D           A +   +++    + +    A
Sbjct: 5  IAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQEKVNLIEENKIADIAQSA 64

Query: 67 EAIV 70
          + I+
Sbjct: 65 DIIL 68


>gi|225018488|ref|ZP_03707680.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
           DSM 5476]
 gi|224948689|gb|EEG29898.1| hypothetical protein CLOSTMETH_02435 [Clostridium methylpentosum
           DSM 5476]
          Length = 453

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 17/24 (70%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTTH + L ++ + + + 
Sbjct: 108 GLQGSGKTTHSAKLAKYFKSQGHR 131


>gi|224025768|ref|ZP_03644134.1| hypothetical protein BACCOPRO_02509 [Bacteroides coprophilus DSM
          18228]
 gi|224019004|gb|EEF77002.1| hypothetical protein BACCOPRO_02509 [Bacteroides coprophilus DSM
          18228]
          Length = 203

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
            G+ I F G+ G+GK+T    L+R LQ++ 
Sbjct: 26 QRGIMIWFTGLSGSGKSTVAIALERELQKRG 56


>gi|224138482|ref|XP_002322825.1| predicted protein [Populus trichocarpa]
 gi|222867455|gb|EEF04586.1| predicted protein [Populus trichocarpa]
          Length = 576

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G GKTT  + L  +L+++     +       PAA     +++           
Sbjct: 191 ILLAGLQGVGKTTVCAKLANYLKKQGKSCMLIAGDVYRPAA--IDQLVILGEQVGVPVYT 248

Query: 67  E 67
           E
Sbjct: 249 E 249


>gi|218463357|ref|ZP_03503448.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli Kim 5]
          Length = 270

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG F+S  G  G+GK+T + LL + L+
Sbjct: 30 SGEFVSIVGPSGSGKSTVLRLLTQALR 56


>gi|190893711|ref|YP_001980253.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli CIAT 652]
 gi|190698990|gb|ACE93075.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli CIAT 652]
          Length = 259

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG F+S  G  G+GK+T + LL + L+
Sbjct: 30 SGEFVSIVGPSGSGKSTVLRLLTQALR 56


>gi|182439330|ref|YP_001827049.1| putative dephospho-CoA kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467846|dbj|BAG22366.1| putative dephospho-CoA kinase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 200

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 74/216 (34%), Gaps = 34/216 (15%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFGA 64
           GI GAGK+    LL ++   L   +       EPG    A         +L+        
Sbjct: 9   GI-GAGKSEVSRLLVKYGAVLIDSDRIAREVVEPGTPGLAAVVEEFGPGVLTAEGALDRP 67

Query: 65  EAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              A+VFA   RL  +  ++ P             + +  A Q        + +  +  +
Sbjct: 68  ALGALVFADPGRLAALNAIVHPL------------VGARAAEQERAAPEDAVVVHDVPLL 115

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   + P  D  +++D   +  L+R+     + ES        +      +       +A
Sbjct: 116 TENGLAPLYDLVVVVDASPETQLERLVTLRGMTESDARARMAAQATRDQRR------AVA 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                   IVD+    +++   +  +  ELV++  +
Sbjct: 170 D------LIVDNDGPLEALQPQVRTVWDELVRRAAA 199


>gi|241203145|ref|YP_002974241.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857035|gb|ACS54702.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM1325]
          Length = 362

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|160901662|ref|YP_001567243.1| type II secretion system protein E [Petrotoga mobilis SJ95]
 gi|160359306|gb|ABX30920.1| type II secretion system protein E [Petrotoga mobilis SJ95]
          Length = 368

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            S + I F G  G+GKTT +  +    +++   VH    P           ++     D+
Sbjct: 147 KSKMLI-FSGPTGSGKTTTMQYIVNKFKKR-RKVHSIENP-VEYINPGIIQIVSKNEEDK 203

Query: 62  FG 63
             
Sbjct: 204 AD 205


>gi|125585824|gb|EAZ26488.1| hypothetical protein OsJ_10380 [Oryza sativa Japonica Group]
          Length = 621

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARH-VLLSCGVDEFGAEAE 67
          G  GAGKTT I  L   +QR +    V +  EP G    +     V+    +      AE
Sbjct: 5  GASGAGKTTLIDALADRIQRDSLRGAVTLNGEPLGGRMLKVISAYVMQDDLLYPMLTVAE 64

Query: 68 AIVFAA 73
           ++++A
Sbjct: 65 TLMYSA 70


>gi|119872034|ref|YP_930041.1| hypothetical protein Pisl_0520 [Pyrobaculum islandicum DSM 4184]
 gi|119673442|gb|ABL87698.1| conserved hypothetical protein [Pyrobaculum islandicum DSM 4184]
          Length = 433

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGV 59
           GAGK+T    + R L  K Y V V R P       E+   V      
Sbjct: 129 GAGKSTVSKEVVRELSAKGYRVAVVRHPMPYRDLEESIVEVFKRPED 175


>gi|72383003|ref|YP_292358.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus str. NATL2A]
 gi|108860875|sp|Q46IM3|PANCY_PROMT RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|72002853|gb|AAZ58655.1| cytidylate kinase [Prochlorococcus marinus str. NATL2A]
          Length = 516

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL 28
           M+    I+ +G  GAGK+T      + L
Sbjct: 282 MHRKPIIAIDGPAGAGKSTVTKAFAKKL 309


>gi|88809888|ref|ZP_01125394.1| Adenylylsulfate kinase [Synechococcus sp. WH 7805]
 gi|88786272|gb|EAR17433.1| Adenylylsulfate kinase [Synechococcus sp. WH 7805]
          Length = 215

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  + + + L  +    +                 +L       G   + 
Sbjct: 44  FTGLSGAGKSTLANAVNQALFERGLATY-----------------VLDGDNIRHGLCKDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  L  G I+L 
Sbjct: 87  GFSDADREENIRRIGEVAKLFLDSGVIVLT 116


>gi|67922058|ref|ZP_00515574.1| Pilus retraction protein PilT [Crocosphaera watsonii WH 8501]
 gi|67856274|gb|EAM51517.1| Pilus retraction protein PilT [Crocosphaera watsonii WH 8501]
          Length = 259

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G  G+GK+T ++ +  ++ +++    +T E       ++ R ++    V  
Sbjct: 29  HKG-LILVTGPTGSGKSTTMAAMVDYINKEHPKHIITIEDPVEFVHQSRRSLIKKREVGM 87

Query: 62  FGAEAEAIVFAAARLD 77
              + +  + AA R D
Sbjct: 88  HTHKFDNALKAALRED 103


>gi|330432149|gb|AEC17208.1| cell division protein FtsY [Gallibacterium anatis UMN179]
          Length = 431

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 14/115 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q++   V +    G T  A A   + +    +     A+A  
Sbjct: 232 GVNGVGKTTTIGKLAKQFQQQGKSVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQA-- 287

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + ++ A  +G  IL+ D            R  +++  +D L++I 
Sbjct: 288 TGADSASVLFDAMQSATAKGVDILIAD---------TAGRLQNKNNLMDELRKIV 333


>gi|323347808|gb|EGA82072.1| Ura6p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354114|gb|EGA85960.1| Ura6p [Saccharomyces cerevisiae VL3]
          Length = 204

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 61/208 (29%), Gaps = 32/208 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L +                 +    +A  +L +          E I 
Sbjct: 23  GGPGAGKGTQCEKLVK---------------DYSFVHLSAGDLLRAEQGRAGSQYGELIK 67

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-HLFLDSLQEISVQEVM 129
                   V   I  AL+   I       D+  A + +         +D         V 
Sbjct: 68  NCIKEGQIVPQEITLALLRNAI------SDNXKANKHKFLIDGFPRKMDQAISFERDIVE 121

Query: 130 PDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLDIARNQ 184
               +  D P DI L+R+  R   S R    ++  +++     E      + F       
Sbjct: 122 SKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFXTFKETSMPVIEYFET----- 176

Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212
             +   V    S + V  ++ + + + +
Sbjct: 177 KSKVVRVRCDRSVEDVYKDVQDAIRDRL 204


>gi|317009369|gb|ADU79949.1| adenylate kinase [Helicobacter pylori India7]
          Length = 191

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 44/222 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I   G  G+GKTT   L+ +    +      T +     +A+     LL   ++
Sbjct: 1   MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V   I  A+      I+L D +  S      E+  +    L+
Sbjct: 55  KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRS-----VEQMRALDKELN 104

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR---- 174
           +  E+ ++ V         + V +     + R   R     D     +V+ H + R    
Sbjct: 105 AQNEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMRVFLD 151

Query: 175 -----QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                Q F            I++   S + +   +   +   
Sbjct: 152 PLGEIQNFYKAKHLH----KIINGERSIEEIVHEMQEYILSF 189


>gi|294852548|ref|ZP_06793221.1| adenylate kinase [Brucella sp. NVSL 07-0026]
 gi|294821137|gb|EFG38136.1| adenylate kinase [Brucella sp. NVSL 07-0026]
          Length = 194

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 53/218 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   LL    ++       T         +  R  +      E G  A+A++
Sbjct: 7   GPPGAGKGTQAGLLT---KKHGIPQLST--------GDMLRAAV--AQQSEIGKRAKAVM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFLDSLQEISV 125
                   V + I         ++ +R +D+      +   G   +       +L ++  
Sbjct: 54  ---DAGQLVSDEIVNQ------IVSER-IDAPDCANGFILDGYPRTVPQA--QALSQMLS 101

Query: 126 Q-EVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEKR--- 173
              +  D  I L +  +  +KR+++R          +R     + F ++ V   EK    
Sbjct: 102 GKGLKLDAVIELKVDENALVKRMKSRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPL 161

Query: 174 ---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                   ++         +++     + V   I  I+
Sbjct: 162 SSYYAGTGEL--------RVINGMAPVEEVTAEIERIL 191


>gi|294784284|ref|ZP_06749578.1| guanylate kinase [Fusobacterium sp. 3_1_27]
 gi|294488040|gb|EFG35392.1| guanylate kinase [Fusobacterium sp. 3_1_27]
          Length = 185

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|293376781|ref|ZP_06623003.1| ABC transporter transmembrane region [Turicibacter sanguinis PC909]
 gi|292644647|gb|EFF62735.1| ABC transporter transmembrane region [Turicibacter sanguinis PC909]
          Length = 585

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           I+  G  GAGKTT ++LL RF +     +++     GTP  +  R  +  
Sbjct: 376 IAIVGPTGAGKTTLVNLLMRFNEINGGAIYI----DGTPINQLTRENIHD 421


>gi|307728791|ref|YP_003906015.1| adenylylsulfate kinase [Burkholderia sp. CCGE1003]
 gi|307583326|gb|ADN56724.1| adenylylsulfate kinase [Burkholderia sp. CCGE1003]
          Length = 203

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 14/85 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L+R L  + +  +V          +  RH L +    +     E   
Sbjct: 35  GLSGAGKSTIAFELERQLVERGHACYVL-------DGDNVRHGLGNDLGFDPHDRHE--- 84

Query: 71  FAAARLDHVENVIRPALMEGKILLC 95
               R+ HV  ++  A   G I++ 
Sbjct: 85  -NIRRVAHVAQLMNDA---GLIVIT 105


>gi|323525001|ref|YP_004227154.1| adenylylsulfate kinase [Burkholderia sp. CCGE1001]
 gi|323382003|gb|ADX54094.1| adenylylsulfate kinase [Burkholderia sp. CCGE1001]
          Length = 203

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 14/85 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L+R L  + +  +V          +  RH L S    +     E   
Sbjct: 35  GLSGAGKSTIAFELERQLVAQGHACYVL-------DGDNVRHGLASDLGFDPNDRHE--- 84

Query: 71  FAAARLDHVENVIRPALMEGKILLC 95
               R+ HV  ++  A   G I++ 
Sbjct: 85  -NIRRVAHVAQLMNDA---GLIVIT 105


>gi|301112407|ref|XP_002997974.1| adenylate kinase, putative [Phytophthora infestans T30-4]
 gi|262112268|gb|EEY70320.1| adenylate kinase, putative [Phytophthora infestans T30-4]
          Length = 286

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 61/223 (27%), Gaps = 64/223 (28%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK T   LL R L     DV            E  R  +        G +A+  +    
Sbjct: 50  SGKGTQCELLVRAL-----DVVHLS------TGEMLRQAIRDG--TSLGQQAQGYM---D 93

Query: 75  RLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               V          E +  P       LL            G   +           I+
Sbjct: 94  NGQLVPDELIVGVVLERLALPDCKSRGWLL-----------DGFPRTEAQALALLAARIA 142

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------RKDVMIHE 171
                PDC + LD+  D  +KR+  R    E+    + E             ++     E
Sbjct: 143 -----PDCVLALDVADDQVVKRIAGRRLDPETGKTYHMELNPPPSDVAARVIQRSDDTEE 197

Query: 172 KRR---QIFLDIARN----QPDRCHIV--DSAHSFQSVATNIL 205
             R   Q +   +          C ++  D   S   VA  +L
Sbjct: 198 TVRTRLQQYHAHSEAVVSTLSGVCELIQADGTRSVDQVAEQLL 240


>gi|226305143|ref|YP_002765101.1| bifunctional protein CysNC [Rhodococcus erythropolis PR4]
 gi|226184258|dbj|BAH32362.1| bifunctional protein CysNC [Rhodococcus erythropolis PR4]
          Length = 633

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++R L       +                 LL       G   + 
Sbjct: 465 FTGLSGSGKSTIANDVERQLHALGAHTY-----------------LLDGDNVRHGLNRDL 507

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
              AA R++++     V R     G I+L 
Sbjct: 508 GFTAADRVENIRRVTEVTRLMADAGLIVLA 537


>gi|222640270|gb|EEE68402.1| hypothetical protein OsJ_26756 [Oryza sativa Japonica Group]
          Length = 680

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 73/244 (29%), Gaps = 57/244 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEF 62
             G   +GK T   ++     +       T +        GT   + A+  + +  +   
Sbjct: 94  ISGAPASGKGTQCRMIVE---KYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPD 150

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               + +         V  + +P + E    L D +  S                   Q 
Sbjct: 151 QVVTDMV---------VSRLSQPDVRERGW-LLDGYPRSY---------------AQAQS 185

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVM 168
           +   ++ PD  I+L++P DI + R   R    E+  +                   +   
Sbjct: 186 LESMKIRPDIFIVLEVPDDILIDRCVGRRLDPETGKIYHIKNFPPENDEVSARLVTRSDD 245

Query: 169 IHEKRRQIFLDIARNQPDRCH--------IVDSAHSFQSVATNILNIVWELVQKRVSPLS 220
             EK +   LD  +   +            +D     + V   I +++ ++ +     + 
Sbjct: 246 TFEKVKSR-LDTYKQNSEAVIPTYSDLLNQIDGNRQVEVVFNEIDSLLQKICENASFNML 304

Query: 221 SKKD 224
           +K +
Sbjct: 305 AKTN 308


>gi|220908720|ref|YP_002484031.1| adenylyl-sulfate kinase [Cyanothece sp. PCC 7425]
 gi|219865331|gb|ACL45670.1| Adenylyl-sulfate kinase [Cyanothece sp. PCC 7425]
          Length = 203

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    ++  L +                    R  +        G  A+ 
Sbjct: 31  FTGLSGSGKSTLAHAVEEKLHQLGC-----------------RTFVFDGDNVRHGLCADL 73

Query: 69  IVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++  +    +  +  G I L                S      D ++++  
Sbjct: 74  GFSKQDRVENIRRIGEMSKLFIEAGVIALT------------AFISPFKADRDRIRQLVA 121

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           +       I  D P++I  +R
Sbjct: 122 EGDF--LEIYCDCPLEICEQR 140


>gi|170016694|ref|YP_001727613.1| dephospho-CoA kinase [Leuconostoc citreum KM20]
 gi|169803551|gb|ACA82169.1| Dephospho-CoA kinase [Leuconostoc citreum KM20]
          Length = 206

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 39/88 (44%), Gaps = 14/88 (15%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  I++    ++ L R+++R SL E    +   R  + I EK        AR      ++
Sbjct: 128 DKIIVVSADPEVQLARLKSRDSLDERQAKNRM-RTQMPIAEKV-------ARAD----YV 175

Query: 191 VDSAHSFQSVATNILNIVWELVQKRVSP 218
           +++      +   + +++ +L  K ++P
Sbjct: 176 INNNGDKSQLKAQVDDLIEKL--KDIAP 201


>gi|209547967|ref|YP_002279884.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209533723|gb|ACI53658.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM2304]
          Length = 362

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|152996868|ref|YP_001341703.1| cytidylate kinase [Marinomonas sp. MWYL1]
 gi|189028384|sp|A6VZ89|KCY_MARMS RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|150837792|gb|ABR71768.1| cytidylate kinase [Marinomonas sp. MWYL1]
          Length = 227

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 16/98 (16%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +N G  I+ +G  GAGK T   L+   L    + +          +    R + L+    
Sbjct: 2  INQGPVITIDGPSGAGKGTVSQLIAEKL---GWHIL--------DSGALYRLLALAVSHH 50

Query: 61 EF-GAEAEAIVFAAARL----DHVENVIRPALMEGKIL 93
               + E +   A  L       E      ++EG+I+
Sbjct: 51 GMSSDDVETLKVLAEHLDIQFQQSEEGKVEIILEGEIV 88


>gi|29347419|ref|NP_810922.1| guanylate kinase [Bacteroides thetaiotaomicron VPI-5482]
 gi|45477127|sp|Q8A677|KGUA_BACTN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|29339319|gb|AAO77116.1| guanylate kinase (GMP kinase) [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 204

 Score = 36.5 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I F    G+GK+T I+ L        + +  T  P          +  L+      
Sbjct: 17  TGKLIIFSAPSGSGKSTIINYLLTQNLNLAFSISATSRPPRGTEKHGVEYFFLTPEEFRC 76

Query: 63  GAEAEAIV----FAAARLD-HVENVIRPALMEGKILLCD 96
             E    +        R    ++  +   L +G+ ++ D
Sbjct: 77  RIENNEFLEYEEVYKDRYYGTLKEQVEKQLEKGQNVVFD 115


>gi|329732439|gb|EGG68789.1| ABC transporter, ATP-binding protein [Staphylococcus aureus
          subsp. aureus 21193]
          Length = 226

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N+G FI+  G  G+GK+T I++L
Sbjct: 28 INAGEFIAIMGPSGSGKSTLINIL 51


>gi|326565383|gb|EGE15560.1| polyphosphate kinase 2 [Moraxella catarrhalis 103P14B1]
 gi|326573372|gb|EGE23340.1| polyphosphate kinase 2 [Moraxella catarrhalis 101P30B1]
          Length = 378

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 144 IIFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTEQERGQW----------------- 186

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 187 ----YFQRYVQHLPT-------AGEIVLFDRSWY 209


>gi|318056320|ref|ZP_07975043.1| dephospho-CoA kinase [Streptomyces sp. SA3_actG]
 gi|318076497|ref|ZP_07983829.1| dephospho-CoA kinase [Streptomyces sp. SA3_actF]
          Length = 212

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 35/214 (16%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFGA 64
           GI GAGK+    LL  +   L   +       EPG    A         +L+        
Sbjct: 12  GI-GAGKSEVSRLLVSYGAVLIDSDRISREVVEPGTEGLAAIVAAFGPEVLAADGSLDRP 70

Query: 65  EAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              A+VFA   R   +  ++ P + E       R    S A Q        + ++ +  +
Sbjct: 71  RLGALVFADEERRRTLNGIVHPLVRE-------R----SAALQAAA-PPGSVVVNDVPLL 118

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
               +    D  +++D      L R+     + E+              +  R+    +A
Sbjct: 119 VENGLQTLYDLVLVVDASPATQLSRLTGDRGMSEADARARMAA------QATRE--QRLA 170

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   ++ +  + + +A  +   VW+ +++R
Sbjct: 171 AAD----VVIPNDGTREELAARVRE-VWQSLERR 199


>gi|299146364|ref|ZP_07039432.1| uridine kinase [Bacteroides sp. 3_1_23]
 gi|298516855|gb|EFI40736.1| uridine kinase [Bacteroides sp. 3_1_23]
          Length = 203

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           L I   G  G+GKTT +  +   L      V + ++     ++        +   D   A
Sbjct: 2   LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123
              +++       HV       L EGK +    +   +   Q E    +   +  ++ I 
Sbjct: 61  FEWSLL-----SKHVMT-----LKEGKSIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 110

Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                 ++ +M D  I +D   D  L RV  R  +      +
Sbjct: 111 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVIERGRTAE 151


>gi|289423755|ref|ZP_06425550.1| cytidylate kinase [Peptostreptococcus anaerobius 653-L]
 gi|289155794|gb|EFD04464.1| cytidylate kinase [Peptostreptococcus anaerobius 653-L]
          Length = 220

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 12/67 (17%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M + + I+ +G  GAGK+T   L+   L     +   T            R + L C  +
Sbjct: 1  MTN-IIIAIDGPAGAGKSTISKLVATKL---GINYIDT--------GAMYRALTLKCIEN 48

Query: 61 EFGAEAE 67
              E E
Sbjct: 49 NIDTENE 55


>gi|269215672|ref|ZP_06159526.1| ATP binding protein of ABC transporter [Slackia exigua ATCC 700122]
 gi|269131159|gb|EEZ62234.1| ATP binding protein of ABC transporter [Slackia exigua ATCC 700122]
          Length = 541

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
              G+ G GKTT   +L   L+ +   V  + EP
Sbjct: 369 VVSGVNGVGKTTLARVLCGVLREQGGRVLRSDEP 402


>gi|221633791|ref|YP_002523017.1| signal recognition particle protein [Thermomicrobium roseum DSM
           5159]
 gi|221156000|gb|ACM05127.1| signal recognition particle protein [Thermomicrobium roseum DSM
           5159]
          Length = 488

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 20/138 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT ++ L   L+++     +       PAA E  R +     +  +    +  
Sbjct: 107 GLQGSGKTTQVAKLGYHLRKEGRRPLLVAADIYRPAAVEQLRTLGKQHDLPVYDEGTKV- 165

Query: 70  VFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 ++ V++ ++ A  +G   ++ D            R       +  L+ ++ + V
Sbjct: 166 ----DPVETVKHAVKVARDQGYNPVIID---------TAGRLQIDEPMMQELERMA-EAV 211

Query: 129 MPDCT-IILDLPVDIGLK 145
            P  T I+L      G +
Sbjct: 212 RP--TEILLVADAMTGQE 227


>gi|221124306|ref|XP_002161263.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 228

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC 57
           G FI   G  G GK+T + ++    +           V    EP     A   ++  L  
Sbjct: 33  GEFIVIVGPSGCGKSTLLRMVAGLEEVSGGQISIGGRVVNDLEPSDRDIAMVFQNYALYP 92

Query: 58  GVDEFGAEAEAI 69
            +  F   A  +
Sbjct: 93  HMSVFENMAYGL 104


>gi|206560621|ref|YP_002231386.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Burkholderia cenocepacia J2315]
 gi|198036663|emb|CAR52561.1| bifunctional enzyme CysN/CysC [includes: sulfate adenylyltransferas
           subunit 1; adenylyl-sulfate kinase] [Burkholderia
           cenocepacia J2315]
          Length = 632

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 20/85 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +L+++ L       +                 LL       G   +   
Sbjct: 467 GLSGAGKSTIANLVEQRLHALGKHTY-----------------LLDGDNVRHGLNRDLGF 509

Query: 71  FAAARLD---HVENVIRPALMEGKI 92
             A R++    V  V R  L  G I
Sbjct: 510 TEADRVENIRRVAEVARLMLDAGLI 534


>gi|169827481|ref|YP_001697639.1| cytidylate kinase [Lysinibacillus sphaericus C3-41]
 gi|238688181|sp|B1HT93|KCY_LYSSC RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|168991969|gb|ACA39509.1| Cytidylate kinase [Lysinibacillus sphaericus C3-41]
          Length = 224

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   + I+ +G  GAGK+T   ++   L
Sbjct: 1  MKKNIQIAIDGPAGAGKSTIAKIVAEAL 28


>gi|167625985|ref|YP_001676279.1| sporulation domain-containing protein [Shewanella halifaxensis
          HAW-EB4]
 gi|167356007|gb|ABZ78620.1| Sporulation domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 473

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDE 61
           +   G +GAGKTT  + L   L+  +  + +   P    +AE  R +L+        D+
Sbjct: 29 LMVLTGEDGAGKTTLATALLNELEHHSSALVIC--PKHCDSAEIRRKILVQLLSDPVFDD 86

Query: 62 FGAEAEAIV 70
               E ++
Sbjct: 87 EIPLPECLL 95


>gi|149919300|ref|ZP_01907782.1| adenosine 5-phosphosulfate kinase [Plesiocystis pacifica SIR-1]
 gi|149819800|gb|EDM79224.1| adenosine 5-phosphosulfate kinase [Plesiocystis pacifica SIR-1]
          Length = 192

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 20/96 (20%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
          + G  + F G+ G+GKTT    ++R L R                    R   L   V  
Sbjct: 18 HRGALVWFTGLSGSGKTTLARAVERELNRLG-----------------VRTYRLDGDVMR 60

Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL 94
           G  A+       R ++V     V R  +  G ++L
Sbjct: 61 DGLNADLGFSPEDRRENVRRNGEVGRLMVDAGLVVL 96


>gi|118575528|ref|YP_875271.1| signal recognition particle GTPase [Cenarchaeum symbiosum A]
 gi|118194049|gb|ABK76967.1| signal recognition particle GTPase [Cenarchaeum symbiosum A]
          Length = 422

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 15/130 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAE 65
           I F GI G GKTT ++ +   L+     V +         A E  R             +
Sbjct: 78  IVFVGINGTGKTTSVAKIAHMLRDSKLSVVLAAADTFRAGAIEQLRE-----HAKRLNLK 132

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
             A  + +       + +  A   G        +D        R  +    ++ +++I +
Sbjct: 133 IVAQNYGSDPAAVARDAVLYARSHG--------VDCVLVDTAGRMQTSKNLMEQIEKI-I 183

Query: 126 QEVMPDCTII 135
           + V PD  I 
Sbjct: 184 RVVQPDLKIF 193


>gi|222056091|ref|YP_002538453.1| dethiobiotin synthase [Geobacter sp. FRC-32]
 gi|221565380|gb|ACM21352.1| dethiobiotin synthase [Geobacter sp. FRC-32]
          Length = 252

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)

Query: 3  SGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTR 39
           G+FI+  G + G GKT   ++L R L  K   V V +
Sbjct: 5  KGIFIT--GTDTGVGKTIVSAVLARLLANKGLSVGVMK 40


>gi|114047114|ref|YP_737664.1| ABC transporter ATPase [Shewanella sp. MR-7]
 gi|113888556|gb|ABI42607.1| ABC transporter related [Shewanella sp. MR-7]
          Length = 640

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+  G  G GK+T I LL   LQ ++ +V V
Sbjct: 351 IALIGPNGCGKSTLIKLLIEKLQPQSGEVKV 381


>gi|47564562|ref|ZP_00235607.1| daunorubicin resistance ATP-binding protein drrA [Bacillus cereus
           G9241]
 gi|47558714|gb|EAL17037.1| daunorubicin resistance ATP-binding protein drrA [Bacillus cereus
           G9241]
          Length = 253

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 27/198 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G   +  G  GAGKTT +++L   L++   +V +             + + L+     
Sbjct: 29  QRGEIFALLGSNGAGKTTTVNVLSTLLKQDGGEVSICGFDIKGQPDYVRQSISLTGQFAA 88

Query: 62  FGAEA---EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                   E ++  A     +  V  PA +     L +RF  +  A Q     S  +   
Sbjct: 89  LDGMLTGRENLIMVAK----LRGVSNPAQVADN--LLERFSLTGAANQRAEQYSGGMKRR 142

Query: 119 SLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
              +I++  +     I LD     L  +    R++   +++E A           I    
Sbjct: 143 L--DIAMSLIGAPAVIFLDEPTTGLDPE---ARIEVWDTVKELAGS------GTTILLTT 191

Query: 174 RQIFLDIARNQPDRCHIV 191
           +  +L+ A    DR  I+
Sbjct: 192 Q--YLEEAEQLADRIAIL 207


>gi|15923188|ref|NP_370722.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
          aureus Mu50]
 gi|15925902|ref|NP_373435.1| hypothetical protein SA0192 [Staphylococcus aureus subsp. aureus
          N315]
 gi|21281901|ref|NP_644987.1| hypothetical protein MW0172 [Staphylococcus aureus subsp. aureus
          MW2]
 gi|148266623|ref|YP_001245566.1| ABC transporter related [Staphylococcus aureus subsp. aureus JH9]
 gi|150392662|ref|YP_001315337.1| ABC transporter related [Staphylococcus aureus subsp. aureus JH1]
 gi|156978528|ref|YP_001440787.1| hypothetical protein SAHV_0197 [Staphylococcus aureus subsp.
          aureus Mu3]
 gi|253315446|ref|ZP_04838659.1| hypothetical protein SauraC_04707 [Staphylococcus aureus subsp.
          aureus str. CF-Marseille]
 gi|255004994|ref|ZP_05143595.2| hypothetical protein SauraM_00955 [Staphylococcus aureus subsp.
          aureus Mu50-omega]
 gi|257793989|ref|ZP_05642968.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258408604|ref|ZP_05680889.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258421194|ref|ZP_05684121.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|258438943|ref|ZP_05690034.1| ABC transporter ATP-binding protein [Staphylococcus aureus A9299]
 gi|258444178|ref|ZP_05692512.1| ABC transporter ATP-binding protein [Staphylococcus aureus A8115]
 gi|258447058|ref|ZP_05695208.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258448516|ref|ZP_05696629.1| ABC transporter ATP-binding protein [Staphylococcus aureus A6224]
 gi|258455749|ref|ZP_05703704.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|282893354|ref|ZP_06301587.1| ABC transporter [Staphylococcus aureus A8117]
 gi|282926305|ref|ZP_06333937.1| ABC transporter [Staphylococcus aureus A10102]
 gi|295405468|ref|ZP_06815278.1| ABC transporter [Staphylococcus aureus A8819]
 gi|296274952|ref|ZP_06857459.1| hypothetical protein SauraMR_01360 [Staphylococcus aureus subsp.
          aureus MR1]
 gi|297209297|ref|ZP_06925696.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297244805|ref|ZP_06928685.1| hypothetical protein SLAG_00895 [Staphylococcus aureus A8796]
 gi|300911296|ref|ZP_07128745.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Staphylococcus aureus subsp. aureus TCH70]
 gi|13700114|dbj|BAB41413.1| SA0192 [Staphylococcus aureus subsp. aureus N315]
 gi|14245965|dbj|BAB56360.1| similar to ABC transporter ATP-binding protein [Staphylococcus
          aureus subsp. aureus Mu50]
 gi|21203336|dbj|BAB94037.1| MW0172 [Staphylococcus aureus subsp. aureus MW2]
 gi|147739692|gb|ABQ47990.1| ABC transporter related [Staphylococcus aureus subsp. aureus JH9]
 gi|149945114|gb|ABR51050.1| ABC transporter related [Staphylococcus aureus subsp. aureus JH1]
 gi|156720663|dbj|BAF77080.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257787961|gb|EEV26301.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257840613|gb|EEV65072.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257842618|gb|EEV67040.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257847819|gb|EEV71815.1| ABC transporter ATP-binding protein [Staphylococcus aureus A9299]
 gi|257850437|gb|EEV74385.1| ABC transporter ATP-binding protein [Staphylococcus aureus A8115]
 gi|257854071|gb|EEV77024.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257858147|gb|EEV81035.1| ABC transporter ATP-binding protein [Staphylococcus aureus A6224]
 gi|257861961|gb|EEV84734.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|282591634|gb|EFB96705.1| ABC transporter [Staphylococcus aureus A10102]
 gi|282764040|gb|EFC04167.1| ABC transporter [Staphylococcus aureus A8117]
 gi|285815923|gb|ADC36410.1| ABC transporter ATP-binding protein [Staphylococcus aureus
          04-02981]
 gi|294969543|gb|EFG45562.1| ABC transporter [Staphylococcus aureus A8819]
 gi|296886230|gb|EFH25164.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297178322|gb|EFH37569.1| hypothetical protein SLAG_00895 [Staphylococcus aureus A8796]
 gi|300887475|gb|EFK82671.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Staphylococcus aureus subsp. aureus TCH70]
 gi|312828721|emb|CBX33563.1| ABC transporter family protein [Staphylococcus aureus subsp.
          aureus ECT-R 2]
 gi|315130173|gb|EFT86161.1| hypothetical protein CGSSa03_04874 [Staphylococcus aureus subsp.
          aureus CGS03]
 gi|329725768|gb|EGG62247.1| ABC transporter, ATP-binding protein [Staphylococcus aureus
          subsp. aureus 21172]
          Length = 226

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N+G FI+  G  G+GK+T I++L
Sbjct: 28 INAGEFIAIMGPSGSGKSTLINIL 51


>gi|315613630|ref|ZP_07888537.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis ATCC 49296]
 gi|315314321|gb|EFU62366.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus sanguinis ATCC 49296]
          Length = 231

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 12/89 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL----- 54
           +++G  +   G  G+GKTT I L+   LQ  K   +   ++P  +PA +A    L     
Sbjct: 26  ISAGKIVGLLGPNGSGKTTLIKLINGLLQPNKGRVLINGQDP--SPATKAIVSYLPDTTY 83

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDHV 79
           L+  +    A      F       R  H+
Sbjct: 84  LNEEMKVKDALTYFKTFYQDFNLERAQHL 112


>gi|296503821|ref|YP_003665521.1| cobalt transport ATP-binding protein CbiO [Bacillus thuringiensis
           BMB171]
 gi|296324873|gb|ADH07801.1| cobalt transport ATP-binding protein cbiO [Bacillus thuringiensis
           BMB171]
          Length = 551

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 8/96 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN-------YDVHVTREPGGTPAAEAARHVL 54
             G FI+  G  G+GKTT +   K+ L           Y+  +  E     +A+    V 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGTRSGEIFYEGVLIEEVADLLSAQEIGMVF 89

Query: 55  LSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALME 89
            +           + + F+   +    ++I+  + E
Sbjct: 90  QNPENQIVMDTVIQELAFSLENIGLPSHIIQKRIAE 125


>gi|291533163|emb|CBL06276.1| methylmalonyl-CoA mutase metallochaperone MeaB [Megamonas
           hypermegale ART12/1]
          Length = 394

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPG-----GTPAAEAARHVLLSCGVD 60
           I   G+ GAGK+T I  L   L ++ + V  +  +P      G+   +  R   LS   +
Sbjct: 106 IGITGVPGAGKSTFIEALGTKLCQQGHKVAVLAVDPSSTVTRGSILGDKTRMEQLSREPN 165

Query: 61  EF 62
            F
Sbjct: 166 AF 167


>gi|325677748|ref|ZP_08157396.1| hypothetical protein CUS_4928 [Ruminococcus albus 8]
 gi|324110571|gb|EGC04739.1| hypothetical protein CUS_4928 [Ruminococcus albus 8]
          Length = 383

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 3/100 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GK+T +S + + L +  Y V    E   +         +      +F    
Sbjct: 27  IVITGGPCGGKSTAMSRIMKELNKVGYTVLFIPE-TASELINGGVSPVTCAANADFQKCL 85

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
             +     R             E  +++CDR    + AY 
Sbjct: 86  FELQMTKERA--FVRAAEGMEGEKCLIVCDRGALDNKAYM 123


>gi|291619198|ref|YP_003521940.1| TauB [Pantoea ananatis LMG 20103]
 gi|291154228|gb|ADD78812.1| TauB [Pantoea ananatis LMG 20103]
          Length = 277

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
             L +   G  G GKTT ++L+  FL  ++  V +  EP   P AE 
Sbjct: 48 KKALMVVL-GPSGCGKTTLLNLIAGFLPVESGTVSLDGEPVRGPGAER 94


>gi|282855506|ref|ZP_06264825.1| LAO/AO transport system ATPase [Pyramidobacter piscolens W5455]
 gi|282586649|gb|EFB91898.1| LAO/AO transport system ATPase [Pyramidobacter piscolens W5455]
          Length = 376

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPG-----GTPAAEAARHVLLSCGVDEF 62
           G+ GAGK+T I  L  +L  + + V  +  +P      G+   +  R   LS   + F
Sbjct: 103 GVPGAGKSTFIEALGSWLCDRGHRVAVLAVDPSSTVTKGSVLGDKTRMEKLSRHPNAF 160


>gi|270290943|ref|ZP_06197166.1| competence protein ComGA [Pediococcus acidilactici 7_4]
 gi|270280339|gb|EFA26174.1| competence protein ComGA [Pediococcus acidilactici 7_4]
          Length = 320

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL 28
            G+ I F G  G+GKTT I  + + L
Sbjct: 134 RGM-IVFSGPTGSGKTTLIYEIAKKL 158


>gi|296137062|ref|YP_003644304.1| protein of unknown function DUF344 [Thiomonas intermedia K12]
 gi|295797184|gb|ADG31974.1| protein of unknown function DUF344 [Thiomonas intermedia K12]
          Length = 397

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I  +   L  +   V    +P      +                  
Sbjct: 172 ILFEGRDAAGKGGTIKRVMEHLNPRGARVVALEKPSEVERGQW----------------- 214

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 215 ----YFQRYVQHLPT-------AGEIVLFDRSWY 237


>gi|302309971|ref|XP_451606.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|199424821|emb|CAH01999.2| KLLA0B01694p [Kluyveromyces lactis]
          Length = 192

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 46/167 (27%), Gaps = 35/167 (20%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  G GK+T +  L   +     + V   TR+P          + +          
Sbjct: 5   IVISGPSGTGKSTLLKKLFAEYPTSFGFSVSSTTRQPRNGEVNGKDYNFVTVDEFKSMID 64

Query: 65  EAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
             + I        +    ++ V+ V       GK  + D                    +
Sbjct: 65  NKKFIEWAQFSGNYYGTTIESVKEVT----NSGKTCILD---------------IDMQGV 105

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
            S+++  +         +   P   ++  +R+  R +    +     
Sbjct: 106 KSVKQTDLNAR-----FLFVAPPSVEVLKERLTGRGTETPESLEKRL 147


>gi|171320621|ref|ZP_02909641.1| type II secretion system protein E [Burkholderia ambifaria MEX-5]
 gi|171094134|gb|EDT39221.1| type II secretion system protein E [Burkholderia ambifaria MEX-5]
          Length = 472

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I   G  G+GKTT ++ L + ++     V
Sbjct: 251 IVISGGTGSGKTTLLNALSQHIEEHERIV 279


>gi|161619852|ref|YP_001593739.1| signal recognition particle-docking protein FtsY [Brucella canis
           ATCC 23365]
 gi|260567579|ref|ZP_05838049.1| cell division protein FtsY [Brucella suis bv. 4 str. 40]
 gi|161336663|gb|ABX62968.1| signal recognition particle-docking protein FtsY [Brucella canis
           ATCC 23365]
 gi|260157097|gb|EEW92177.1| cell division protein FtsY [Brucella suis bv. 4 str. 40]
          Length = 465

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 269 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSSVVSSK 324

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 325 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 370


>gi|146342159|ref|YP_001207207.1| nucleotide-binding [Bradyrhizobium sp. ORS278]
 gi|146194965|emb|CAL78990.1| conserved hypothetical protein; Nucleotide-binding [Bradyrhizobium
           sp. ORS278]
          Length = 516

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 34/206 (16%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I+  G+ G GK+     L   L+ +   + V         ++  R  L      E   
Sbjct: 339 MLIAVGGLSGTGKSALARALAPILKPRPGAIVV--------RSDVLRKHLFGVAETERLP 390

Query: 65  EAEAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +      A+ R+ H +       L +G  ++    +D+ +A        +H   + ++ +
Sbjct: 391 QKAYSPDASLRVYHELTKTAARVLAQGFAVV----VDAVFA--------KHDEREEIRTL 438

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + ++ +P   + L   + I  +R++ R +    A             E+     LD    
Sbjct: 439 ATRQNVPFAGLFLVADLRIRQERIEGRVNDASDAT-----SAIAQDQERYDIGMLD---- 489

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209
                  VD++ + +S     L+++ 
Sbjct: 490 ----WLRVDASGTPESTLDKSLSVLR 511


>gi|126662654|ref|ZP_01733653.1| guanylate kinase [Flavobacteria bacterium BAL38]
 gi|126626033|gb|EAZ96722.1| guanylate kinase [Flavobacteria bacterium BAL38]
          Length = 190

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 8/103 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  G  + F    G+GKTT +  L     L  +      TR P G    +   +  +S  
Sbjct: 1   MQKGKLLVFSAPSGSGKTTIVRHLLAQPDLNLEFSISCTTRVPRGEEV-DGKDYYFISWD 59

Query: 59  VDEFGAEAEAI-----VFAAARLDHVENVIRPALMEGKILLCD 96
             +   +AE       V+       ++  +      GK ++ D
Sbjct: 60  EFKKHIKAEDFVEWEEVYTDNFYGTLKTEVERIWALGKHVIFD 102


>gi|118475334|ref|YP_891562.1| molybdenum transport ATP-binding protein [Campylobacter fetus
           subsp. fetus 82-40]
 gi|261885438|ref|ZP_06009477.1| molybdenum transport ATP-binding protein [Campylobacter fetus
           subsp. venerealis str. Azul-94]
 gi|118414560|gb|ABK82980.1| molybdenum transport ATP-binding protein [Campylobacter fetus
           subsp. fetus 82-40]
          Length = 283

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 22/144 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVL 54
           +  G F++F G  G+GKTT + ++  FL+      +    V+  +     P      ++ 
Sbjct: 22  IKKGDFVAFYGKSGSGKTTILRIIAGFLKPDNGYIKNGSLVYCDKNYYLEPQKRNIGYLF 81

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQ 113
               +    +  + ++FA         ++  A L E K        +SS          +
Sbjct: 82  QDYALFPNMSVIKNLLFANNDKKLANELLNLAGLDEHK--------NSSINALSGGQKQR 133

Query: 114 HLFLDSLQEISVQEVMPDCTIILD 137
                +L         PD  ++LD
Sbjct: 134 VALARALMR------KPDI-LLLD 150


>gi|120403173|ref|YP_953002.1| signal recognition particle protein [Mycobacterium vanbaalenii
           PYR-1]
 gi|119955991|gb|ABM12996.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Mycobacterium vanbaalenii PYR-1]
          Length = 522

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTT    L ++L+ + + 
Sbjct: 107 GLQGSGKTTLAGKLAKWLKGQGHT 130


>gi|15602129|ref|NP_245201.1| putrescine/spermidine ABC transporter ATPase protein [Pasteurella
          multocida subsp. multocida str. Pm70]
 gi|12720494|gb|AAK02348.1| PotA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 380

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 43 INNGEFLTILGPSGCGKTTVLRLLA 67


>gi|113478328|ref|YP_724389.1| phosphonate C-P lyase system protein PhnL [Trichodesmium erythraeum
           IMS101]
 gi|110169376|gb|ABG53916.1| phosphonate C-P lyase system protein PhnL [Trichodesmium erythraeum
           IMS101]
          Length = 247

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            SG   +  G+ GAGK++ +  + R +L +     + T E      A A  + +L+    
Sbjct: 53  KSGQLTALTGVSGAGKSSLLKCIYRSYLPQSGEIHYYTAEGNWIDIATAKEYEILNLRRQ 112

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK 91
           E     +  +    R   ++ V RP    G 
Sbjct: 113 EISFVTQ-FLHCLPRQTTLDVVARPLFDLGY 142


>gi|327193084|gb|EGE59996.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli CNPAF512]
          Length = 362

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|322704386|gb|EFY95981.1| multidrug resistance protein 1 [Metarhizium anisopliae ARSEF 23]
          Length = 1280

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH 36
            +  G  ++F G  G GK+T I+LL+RF       L+    DV 
Sbjct: 1060 IRPGKMVAFVGASGCGKSTMIALLQRFYDPTSGELRANGRDVK 1102


>gi|320180983|gb|EFW55904.1| Conserved ATP-binding protein YghS [Shigella boydii ATCC 9905]
          Length = 232

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|310659882|ref|YP_003937603.1| multidrug ABC transporter ATP-binding protein [Clostridium
          sticklandii DSM 519]
 gi|308826660|emb|CBH22698.1| putative ABC transporter, ATP-binding protein; multidrug
          transporter [Clostridium sticklandii]
          Length = 229

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
          G  I   G  G+GK+T + L+   LQ    ++ +   P G  +     ++     ++E+ 
Sbjct: 27 GKIIGLLGPNGSGKSTILKLVNGLLQPTEGEIKIMGNPPGIMSKSIISYLPERTYLNEWM 86

Query: 64 AEAEAIVFAAA 74
            ++ I F A 
Sbjct: 87 KISDLINFFAD 97


>gi|297625462|ref|YP_003687225.1| FepC [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921227|emb|CBL55777.1| FepC [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 296

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 3/95 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDE 61
           G F    G    GK+T +  L R L+ +  +V +  +   T   +    +  LL      
Sbjct: 69  GSFTVIIGPNACGKSTLLRGLSRLLKPRGGEVVLDGKAISTYRTKEVARIVGLLPQSSTA 128

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                 A + A  R  H + +IR    + ++ + D
Sbjct: 129 PEGITVADLVARGRYPH-QGLIRQWSHDDEMAVND 162


>gi|298292739|ref|YP_003694678.1| LAO/AO transporter ATPase [Starkeya novella DSM 506]
 gi|296929250|gb|ADH90059.1| LAO/AO transport system ATPase [Starkeya novella DSM 506]
          Length = 340

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
          G+ G+GK+T ++ L   L+ +   V  V  +P    +  A 
Sbjct: 57 GVPGSGKSTLVAALTARLRTQGLKVGIVAVDPSSPYSGGAI 97


>gi|227889628|ref|ZP_04007433.1| excision endonuclease subunit UvrA [Lactobacillus johnsonii ATCC
           33200]
 gi|227849771|gb|EEJ59857.1| excision endonuclease subunit UvrA [Lactobacillus johnsonii ATCC
           33200]
          Length = 951

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G  I   G+ G+GK+T ++L LKR L +K
Sbjct: 629 GKLIVVTGVSGSGKSTLVNLILKRALAQK 657


>gi|269798423|ref|YP_003312323.1| ABC transporter [Veillonella parvula DSM 2008]
 gi|269095052|gb|ACZ25043.1| ABC transporter related protein [Veillonella parvula DSM 2008]
          Length = 599

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          +  G   +  G +GAGKTT I L+   L
Sbjct: 34 IRKGCLTALVGPDGAGKTTLIRLIAGLL 61


>gi|226313205|ref|YP_002773099.1| signal recognition particle protein fifty-four homolog
           [Brevibacillus brevis NBRC 100599]
 gi|226096153|dbj|BAH44595.1| signal recognition particle protein fifty-four homolog
           [Brevibacillus brevis NBRC 100599]
          Length = 470

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L ++LQ++N    +       PAA     VL   L+  V   G +  
Sbjct: 108 GLQGAGKTTTTGKLAKYLQKQNRKPLLVAGDIYRPAAIKQLQVLGEQLNVPVFTLGDQVS 167

Query: 68  AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                   ++     I  A      ++L D            R       +D L++I  +
Sbjct: 168 P-------VEIARQAIEHAKTNHLDVVLID---------TAGRLHIDEALMDELKQI-RE 210

Query: 127 EVMPDCTIILDLPVDIGL 144
              PD  I+L +    G 
Sbjct: 211 VTKPD-EILLVVDAMTGQ 227


>gi|240144346|ref|ZP_04742947.1| shikimate kinase [Roseburia intestinalis L1-82]
 gi|257203594|gb|EEV01879.1| shikimate kinase [Roseburia intestinalis L1-82]
 gi|291535576|emb|CBL08688.1| Shikimate kinase [Roseburia intestinalis M50/1]
 gi|291540817|emb|CBL13928.1| Shikimate kinase [Roseburia intestinalis XB6B4]
          Length = 170

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 60/205 (29%), Gaps = 48/205 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GK+T   +L + L    +              +  R ++   G D F A  
Sbjct: 6   IVLIGMPGVGKSTVGVILAKVL---GFQFVDADLVIQEKEGKLLREIIAEEGPDGFIA-- 60

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                       VEN I   +     ++       S  Y           ++ L++I   
Sbjct: 61  ------------VENRINSEIEAHHSVIA---TGGSVVY-------GKEAMEHLRQIGT- 97

Query: 127 EVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKR--RQIFLDIA 181
                  I L L      +R   ++ R  + +            +  E+    + + DI 
Sbjct: 98  ------VIYLKLDYADIDRRLSDIKGRGVVLKDGQT-----LKDLYDERVVLYEKYADIT 146

Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206
             +      ++   + + +   I  
Sbjct: 147 IAEDG----LNVEQTIEKIVAQIQK 167


>gi|261854665|ref|YP_003261948.1| guanylate kinase [Halothiobacillus neapolitanus c2]
 gi|261835134|gb|ACX94901.1| guanylate kinase [Halothiobacillus neapolitanus c2]
          Length = 209

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M+ G         GAGKT+ I  L+  +      +  T  P
Sbjct: 1  MSQGQLFVISAPSGAGKTSLIKALREQMPDLGLSISHTTRP 41


>gi|221112575|ref|XP_002168470.1| PREDICTED: similar to thymidylate kinase family protein (ISS),
           partial [Hydra magnipapillata]
          Length = 297

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 41/108 (37%), Gaps = 15/108 (13%)

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +   +   +    PD    +++ ++          S+R     + +E  D    +K ++
Sbjct: 3   DMLWCKNCDIGLPRPDAVYYMNIDIEDA--------SVRGDYGCERYEVSD--FQKKVQE 52

Query: 176 IFLDIARNQPD-RCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            F ++   +P      + S  +   V    + I+ + + +R SPLS  
Sbjct: 53  CFQNL--KEPSWNIIEICSVMAEDEVYKKSM-ILQKWIVRR-SPLSIH 96


>gi|190890404|ref|YP_001976946.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli CIAT 652]
 gi|190695683|gb|ACE89768.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli CIAT 652]
          Length = 362

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|148244905|ref|YP_001219599.1| tetraacyldisaccharide 4'-kinase [Candidatus Vesicomyosocius
           okutanii HA]
 gi|166199145|sp|A5CVZ9|LPXK_VESOH RecName: Full=Tetraacyldisaccharide 4'-kinase; AltName: Full=Lipid
           A 4'-kinase
 gi|146326732|dbj|BAF61875.1| tetraacyldisaccharide 4'-kinase [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 315

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 20/128 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72
           G GKT  + LL ++ +++   V  V R  GG         +L+S   + + +  E ++ A
Sbjct: 55  GTGKTPIVILLAQYFKQQGKQVGVVLRGYGGMHHKG---SLLVSKNTNVYLSGDEPLLIA 111

Query: 73  A----------ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                       R   VE++I    +   +++ D        +     + +   +D  + 
Sbjct: 112 LQADLPVMVNRNRAQAVEDLINQCQVN--LIISD----DGLQHYRMDRNIEIAVIDGTRR 165

Query: 123 ISVQEVMP 130
              +  +P
Sbjct: 166 FGNEFFLP 173


>gi|126653374|ref|ZP_01725478.1| cytidylate kinase [Bacillus sp. B14905]
 gi|126589890|gb|EAZ84021.1| cytidylate kinase [Bacillus sp. B14905]
          Length = 224

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   + I+ +G  GAGK+T   ++   L
Sbjct: 1  MKKNIQIAIDGPAGAGKSTIAKIVAEAL 28


>gi|49471597|gb|AAT66124.1| signal recognition particle [Mycoplasma arthritidis]
          Length = 401

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 27/137 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDEFGAEAE 67
           G++G+GKTT  + L  F ++K     + + P   G      AAR  L     ++   + +
Sbjct: 106 GLQGSGKTTTAAKLATFFKKK----KLCQNPLLVGDDIYRPAAREQL-----EQLAKQTQ 156

Query: 68  AIVFAAARLDHV---ENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              F   + D +   +  I+ A      +++ D            R +     +D L  I
Sbjct: 157 TDFFTKEKNDAIFIAKEAIKRANDNRNDLVIVD---------TAGRLAIDENLMDELINI 207

Query: 124 SVQEVMPDCTIILDLPV 140
             + + PD  I+L +  
Sbjct: 208 -KKAIHPDY-ILLVVDA 222


>gi|47219946|emb|CAG11479.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 636

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 30/156 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R +++  +   A +         F D+         S       + ++I     +P
Sbjct: 105 ---DREENIRRIAEVARL---------FADAGLVCIASFISPYGRDRLNARKIHEAAGLP 152

Query: 131 DCTIILDLPVDIGLKR----VQNRYSLRESACLDYF 162
              + +D P+D+  +R    +  R    E     + 
Sbjct: 153 FFEVFVDAPLDVCEQRDVKGLYKRARAGEIRGQSFM 188


>gi|37525459|ref|NP_928803.1| ABC transporter ATP-binding protein YbhF [Photorhabdus
          luminescens subsp. laumondii TTO1]
 gi|36784887|emb|CAE13801.1| ABC transporter ATP-binding protein YbhF [Photorhabdus
          luminescens subsp. laumondii TTO1]
          Length = 579

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT I +L   L+
Sbjct: 42 GPDGAGKTTLIRMLAGLLK 60


>gi|327283657|ref|XP_003226557.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate
           synthase 1-like [Anolis carolinensis]
          Length = 646

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 45/139 (32%), Gaps = 32/139 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 81  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 126

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
               R ++V     V +     G + +      S YA               + E++   
Sbjct: 127 ---DREENVRRIAEVAKLFADAGLVCIT--SFISPYA-------QDRNNARQIHEVAS-- 172

Query: 128 VMPDCTIILDLPVDIGLKR 146
            +P   + +D P+ +  +R
Sbjct: 173 -LPFFEVFVDAPLYVCEQR 190


>gi|326560527|gb|EGE10909.1| polyphosphate kinase 2 [Moraxella catarrhalis 7169]
          Length = 368

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 144 IIFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTEQERGQW----------------- 186

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 187 ----YFQRYVQHLPT-------AGEIVLFDRSWY 209


>gi|318040639|ref|ZP_07972595.1| adenylylsulfate kinase [Synechococcus sp. CB0101]
          Length = 215

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L  +    +                 +L       G   + 
Sbjct: 44  FTGLSGSGKSTLANAVNQALFERGLACY-----------------VLDGDNIRHGLCKDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  L  G ++L 
Sbjct: 87  GFSDADREENIRRIGEVSKLFLDAGVVVLT 116


>gi|312867016|ref|ZP_07727227.1| adenylate kinase [Streptococcus parasanguinis F0405]
 gi|311097498|gb|EFQ55731.1| adenylate kinase [Streptococcus parasanguinis F0405]
          Length = 212

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 81/235 (34%), Gaps = 64/235 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T  + +       +               +  R  +      E G  A++ +
Sbjct: 7   GLPGAGKGTQAAKIVEEFHVAHI-----------STGDMFRAAM--ANQTEMGVLAKSFI 53

Query: 71  FAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124
               + + V +     +++  L +  I               E+      F  ++++  +
Sbjct: 54  ---DKGELVPDDVTNGIVKERLAQDDI--------------KEKGFLLDGFPRTIEQAYA 96

Query: 125 VQEVMPDC------TIILDLPVDIGLKRVQNRYSLRESAC--------------LDYFER 164
           + +++ D        I +++     L+R+  R   RE+                 DY++R
Sbjct: 97  LDQILVDLGLELEGVINIEVDPSCLLERLSGRIIHRETGETYHKVFNPPADYKEEDYYQR 156

Query: 165 KDVMIHEKRRQIFLDIARNQP--------DRCHIVDSAHSFQSVATNILNIVWEL 211
           +D      +R++ ++IA+ +P           H ++       V  +I  ++  L
Sbjct: 157 EDDKPETVKRRLDVNIAQGEPILAHYRAKGLVHDIEGNQDINDVFKDIQKVLENL 211


>gi|296101266|ref|YP_003611412.1| dephospho-CoA kinase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055725|gb|ADF60463.1| dephospho-CoA kinase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 206

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  +++D+  +  ++R   R  +         + + ++  +  R   L +A +      +
Sbjct: 125 DRVLVIDVSPETQIQRTVARDHVS------REQAEQILAAQATRAQRLAVADD------V 172

Query: 191 VDSAHSFQSVATNILNIVWELV 212
           +D+  +  ++A+++  +  + +
Sbjct: 173 IDNNGAPDAIASDVARLHAQYL 194


>gi|289426417|ref|ZP_06428160.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           SK187]
 gi|289428714|ref|ZP_06430397.1| ABC transporter, ATP-binding protein [Propionibacterium acnes J165]
 gi|289153145|gb|EFD01863.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           SK187]
 gi|289158112|gb|EFD06332.1| ABC transporter, ATP-binding protein [Propionibacterium acnes J165]
 gi|313807944|gb|EFS46425.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL087PA2]
 gi|313813354|gb|EFS51068.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL025PA1]
 gi|313819514|gb|EFS57228.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL046PA2]
 gi|313823603|gb|EFS61317.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL036PA2]
 gi|313825926|gb|EFS63640.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL063PA1]
 gi|313829607|gb|EFS67321.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL063PA2]
 gi|313839902|gb|EFS77616.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL086PA1]
 gi|314919288|gb|EFS83119.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL050PA1]
 gi|314954362|gb|EFS98768.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL027PA1]
 gi|314962079|gb|EFT06180.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL002PA2]
 gi|314986517|gb|EFT30609.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL005PA2]
 gi|314990875|gb|EFT34966.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL005PA3]
 gi|315079509|gb|EFT51502.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL053PA2]
 gi|315100470|gb|EFT72446.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL046PA1]
 gi|327451989|gb|EGE98643.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL092PA1]
 gi|327457739|gb|EGF04394.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL083PA2]
 gi|328755192|gb|EGF68808.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL087PA1]
          Length = 267

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V   RE  G         +    S     
Sbjct: 44  GPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRREGSGYRAHIGYVPQECTWSPSWP- 102

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D  +   +A+Q     S         
Sbjct: 103 ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSDLNV-GQFAHQPIGTLSGGQKRRVFL 155

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 156 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 192


>gi|283768985|ref|ZP_06341891.1| polyamine ABC transporter, ATP-binding protein [Bulleidia
          extructa W1219]
 gi|283104342|gb|EFC05719.1| polyamine ABC transporter, ATP-binding protein [Bulleidia
          extructa W1219]
          Length = 524

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          F++  G  G GKTT + ++  FL+     V +
Sbjct: 33 FVTLLGPSGCGKTTLLRIIAGFLEPDGGSVLM 64


>gi|302384028|ref|YP_003819851.1| KAP P-loop domain protein [Brevundimonas subvibrioides ATCC
          15264]
 gi|302194656|gb|ADL02228.1| KAP P-loop domain protein [Brevundimonas subvibrioides ATCC
          15264]
          Length = 728

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRK---NYDVHVTREPGGTPAAEAA 50
          G+ ++  G  GAGK++ ++L++  LQR       V V   P   P ++A 
Sbjct: 38 GVVVAISGPWGAGKSSAVNLVRHHLQRSVEDGSLVIVPFNPWWFPGSDAL 87


>gi|262372507|ref|ZP_06065786.1| signal recognition particle-docking protein FtsY [Acinetobacter
           junii SH205]
 gi|262312532|gb|EEY93617.1| signal recognition particle-docking protein FtsY [Acinetobacter
           junii SH205]
          Length = 379

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 182 GVNGVGKTTTIGKLAKRLQAEGKKVMLAA--GDTFRAAATEQLQIWGERNDIPVVAQG-- 237

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 238 HGADSASVIFDAFESARAKGIDVLIAD 264


>gi|259047933|ref|ZP_05738334.1| stage V sporulation protein K [Granulicatella adiacens ATCC 49175]
 gi|259035430|gb|EEW36685.1| stage V sporulation protein K [Granulicatella adiacens ATCC 49175]
          Length = 632

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 45/192 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  G GKTT   L+ + L               +   E +R  L+             
Sbjct: 420 FLGNPGTGKTTVARLMGQLLHENGIIA-------SSKYVETSRSNLVGQ----------- 461

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQ 126
             +        + ++  AL  G +L  D       AY           ++++ EI   ++
Sbjct: 462 --YIGHTAQKTKEILESAL--GGVLFID------EAYTLAVGGENDFGIEAINEILKFME 511

Query: 127 EVMPDCTIIL-----DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   D  II      D      ++R         S   + F  +D    +  +    ++A
Sbjct: 512 DHREDLVIIFAGYTKD------MERFLEMNEGLRSRIPNTFVFEDYTYEQLVQIGLDELA 565

Query: 182 RNQPDRCHIVDS 193
           +N     + VD+
Sbjct: 566 KNG----YTVDA 573


>gi|256028503|ref|ZP_05442337.1| guanylate kinase [Fusobacterium sp. D11]
 gi|289766423|ref|ZP_06525801.1| guanylate kinase [Fusobacterium sp. D11]
 gi|289717978|gb|EFD81990.1| guanylate kinase [Fusobacterium sp. D11]
          Length = 185

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|253990400|ref|YP_003041756.1| ABC transporter ATP-binding protein ybhf [Photorhabdus
          asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781850|emb|CAQ85013.1| abc transporter atp-binding protein ybhf [Photorhabdus
          asymbiotica]
          Length = 578

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT I +L   L+
Sbjct: 42 GPDGAGKTTLIRMLAGLLK 60


>gi|218508539|ref|ZP_03506417.1| putative nitrate/sulfonate/bicarbonate ABC transporter,
          ATP-binding protein [Rhizobium etli Brasil 5]
          Length = 253

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG F+S  G  G+GK+T + LL + L+
Sbjct: 24 SGEFVSIVGPSGSGKSTVLRLLTQALR 50


>gi|209521973|ref|ZP_03270637.1| Adenylyl-sulfate kinase [Burkholderia sp. H160]
 gi|209497587|gb|EDZ97778.1| Adenylyl-sulfate kinase [Burkholderia sp. H160]
          Length = 212

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 14/85 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L+  L    +  +V          +  R  L S    E     E   
Sbjct: 35  GLSGAGKSTLAFALEEQLIGLGHACYVL-------DGDNIRQGLASDLGFERHDRRE--- 84

Query: 71  FAAARLDHVENVIRPALMEGKILLC 95
               R+ HV  ++  A   G I++ 
Sbjct: 85  -NIRRVAHVAQMMNDA---GLIVIA 105


>gi|195135583|ref|XP_002012212.1| GI16558 [Drosophila mojavensis]
 gi|193918476|gb|EDW17343.1| GI16558 [Drosophila mojavensis]
          Length = 223

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 71/217 (32%), Gaps = 43/217 (19%)

Query: 11  GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPG-----GTPAAEAARHVL-LSCGVDEF 62
           G  G+GK+T +  L   F     + V H TR P      G       R V+  +   DEF
Sbjct: 34  GPSGSGKSTLLKRLFAEFPDTFGFSVSHTTRRPREGEEHGIHYYFVDRDVMEQAIANDEF 93

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
              AE   F        +  +R    +G++ + D                +   ++ +++
Sbjct: 94  IETAE---FTGNMYGTSKEAVREIQNQGRVCILD---------------IEQKGVEQIKK 135

Query: 123 ISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
             +  +     +I + P   D   +R++ R +  E           V I     +  L  
Sbjct: 136 TDLNPI-----LIFNNPPTIDELERRLRKRNTETEETLAKRLNAAQVEI-----EYGLT- 184

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
               P   H +              N V E ++K+ +
Sbjct: 185 ----PGNFHKIIHNVDIDVAYEEFRNFVVEELKKQEA 217


>gi|157158293|ref|YP_001464449.1| putative lipoprotein [Escherichia coli E24377A]
 gi|218696694|ref|YP_002404361.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli 55989]
 gi|256019091|ref|ZP_05432956.1| hypothetical protein ShiD9_09254 [Shigella sp. D9]
 gi|157080323|gb|ABV20031.1| putative lipoprotein [Escherichia coli E24377A]
 gi|218353426|emb|CAU99495.1| conserved hypothetical protein; putative nucleoside triphosphate
           hydrolase domain [Escherichia coli 55989]
 gi|332102546|gb|EGJ05892.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 237

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 17  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 77  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 126


>gi|49471607|gb|AAT66125.1| signal recognition particle [Mycoplasma arthritidis]
          Length = 265

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 27/137 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDEFGAEAE 67
           G++G+GKTT  + L  F ++K     + + P   G      AAR  L     ++   + +
Sbjct: 106 GLQGSGKTTTAAKLATFFKKK----KLCQNPLLVGDDIYRPAAREQL-----EQLAKQTQ 156

Query: 68  AIVFAAARLDHV---ENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              F   + D +   +  I+ A      +++ D            R +     +D L  I
Sbjct: 157 TDFFTKEKNDAIFIAKEAIKRANDNRNDLVIVD---------TAGRLAIDENLMDELINI 207

Query: 124 SVQEVMPDCTIILDLPV 140
             + + PD  I+L +  
Sbjct: 208 -KKAIHPDY-ILLVVDA 222


>gi|27364177|ref|NP_759705.1| adenylylsulfate kinase [Vibrio vulnificus CMCP6]
 gi|37678598|ref|NP_933207.1| adenylylsulfate kinase [Vibrio vulnificus YJ016]
 gi|320157563|ref|YP_004189942.1| adenylylsulfate kinase [Vibrio vulnificus MO6-24/O]
 gi|29336649|sp|Q8DE75|CYSC_VIBVU RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|56748738|sp|Q7MPF0|CYSC_VIBVY RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|27360295|gb|AAO09232.1| Adenylylsulfate kinase [Vibrio vulnificus CMCP6]
 gi|37197338|dbj|BAC93178.1| adenylylsulfate kinase [Vibrio vulnificus YJ016]
 gi|319932875|gb|ADV87739.1| adenylylsulfate kinase [Vibrio vulnificus MO6-24/O]
          Length = 207

 Score = 36.5 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L  + +  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAEQGFHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSTQDRRENIRRIGELAKLMADAGLIVLT 109


>gi|330466134|ref|YP_004403877.1| ABC transporter-like protein [Verrucosispora maris AB-18-032]
 gi|328809105|gb|AEB43277.1| ABC transporter related protein [Verrucosispora maris AB-18-032]
          Length = 270

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          MN+G  +   G  G GKTT +  L   L+
Sbjct: 34 MNAGELVCIVGPSGCGKTTLLKCLAGLLR 62


>gi|331265902|ref|YP_004325532.1| ABC transporter, ATP binding domain [Streptococcus oralis Uo5]
 gi|326682574|emb|CBZ00191.1| ABC transporter, ATP binding domain [Streptococcus oralis Uo5]
          Length = 231

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 12/88 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL-----L 55
           ++G  +   G  G+GKTT I L+   LQ  K   +   ++P  +PA +A    L     L
Sbjct: 27  SAGKIVGLLGPNGSGKTTLIKLINGLLQPNKGRVLINGQDP--SPATKAIVSYLPDTTYL 84

Query: 56  SCGVDEFGAEAEAIVFAAA----RLDHV 79
           +  +    A      F       R  H+
Sbjct: 85  NEEMKVKDALTYFKTFYQDFNLERAQHL 112


>gi|323964801|gb|EGB60268.1| dephospho-CoA kinase [Escherichia coli M863]
 gi|327255081|gb|EGE66684.1| dephospho-CoA kinase [Escherichia coli STEC_7v]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|307704063|ref|ZP_07640992.1| conserved hypothetical protein [Streptococcus mitis SK597]
 gi|307622353|gb|EFO01361.1| conserved hypothetical protein [Streptococcus mitis SK597]
          Length = 202

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK+T    L + L     ++  T      P   + RH++          +  A +  A 
Sbjct: 24  SGKSTFAQKLYQSLDSTTVNLLET-----DPYITSERHLV--VPKQAPDQKVTACLPVAH 76

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP---- 130
            L  +   I  AL  G  +L    ++  +         + + +  ++ +SV   +P    
Sbjct: 77  ELASLRRDIL-ALQAGMDVLT---IEEPWKASEVLSGEKPILI--VEGMSV-GFLPKELF 129

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           D TI      +  LKR   R +   +    +     +  H+ RR+ +L   + 
Sbjct: 130 DKTICFYTDEETELKRRLARDTTMRNRDTSFI----LASHQMRREQYLQYYKE 178


>gi|326779982|ref|ZP_08239247.1| dephospho-CoA kinase [Streptomyces cf. griseus XylebKG-1]
 gi|326660315|gb|EGE45161.1| dephospho-CoA kinase [Streptomyces cf. griseus XylebKG-1]
          Length = 200

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 74/216 (34%), Gaps = 34/216 (15%)

Query: 11  GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFGA 64
           GI GAGK+    LL ++   L   +       EPG    A         +L+        
Sbjct: 9   GI-GAGKSEVSRLLVKYGAVLIDSDRIAREVVEPGTPGLAAVVEEFGTGVLTAEGALDRP 67

Query: 65  EAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              A+VFA   RL  +  ++ P             + +  A Q        + +  +  +
Sbjct: 68  ALGALVFADPGRLAALNAIVHPL------------VGARAAEQERAAPEDAVVVHDVPLL 115

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
           +   + P  D  +++D   +  L+R+     + ES        +      +       +A
Sbjct: 116 TENGLAPLYDLVVVVDASPETQLERLVTLRGMTESDARARMAAQATRDQRR------AVA 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                   IVD+    +++   +  +  ELV++  +
Sbjct: 170 D------LIVDNDGPLEALQPQVRTVWDELVRRAAA 199


>gi|293607882|ref|ZP_06690185.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828455|gb|EFF86817.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122473|gb|ADY81996.1| cell division protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 370

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 173 GVNGVGKTTTIGKLAKRLQGEGKKVMLAA--GDTFRAAATEQLQIWGERNDISVVAQG-- 228

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 229 HGADSASVIFDAFESARAKGIDVLIAD 255


>gi|291545007|emb|CBL18116.1| ABC-type multidrug transport system, ATPase and permease components
           [Ruminococcus sp. 18P13]
          Length = 585

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 14/92 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH-VTREPGGTPAAEAARHVLLSCG 58
           I+  G  G GKTT I+LL RF       +  +  D+  VTR    +      +   L  G
Sbjct: 376 IAIVGPTGCGKTTVINLLMRFYDVDQGSISVEGKDIRNVTRHSLRSSYGMVLQETWLKAG 435

Query: 59  VDEFG------AEAEAIVFAAARLDHVENVIR 84
                         E  +  A++  H  + I+
Sbjct: 436 TIRENICMGKPDATEEELLQASKAAHAHSFIK 467


>gi|316932160|ref|YP_004107142.1| ABC transporter-like protein [Rhodopseudomonas palustris DX-1]
 gi|315599874|gb|ADU42409.1| ABC transporter related protein [Rhodopseudomonas palustris DX-1]
          Length = 259

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          +  G  ++  G  GAGKTT +  L   ++ + 
Sbjct: 28 LTRGHLVALVGPNGAGKTTLLRALAGLIESQG 59


>gi|304316127|ref|YP_003851272.1| excinuclease ABC subunit A [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777629|gb|ADL68188.1| excinuclease ABC, A subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 927

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ I   G+ G+GK+T I  +L + L +K Y       PG   + E    +
Sbjct: 618 GILICITGVSGSGKSTLINEILYKALAQKLYKAKDL--PGKYSSIEGIEFI 666


>gi|238917802|ref|YP_002931319.1| sulfate-transporting ATPase [Eubacterium eligens ATCC 27750]
 gi|238873162|gb|ACR72872.1| sulfate-transporting ATPase [Eubacterium eligens ATCC 27750]
          Length = 362

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G  I+  G  G+GKTT + ++ 
Sbjct: 36 KGKLIALLGPSGSGKTTILRMIA 58


>gi|268315681|ref|YP_003289400.1| dethiobiotin synthase [Rhodothermus marinus DSM 4252]
 gi|262333215|gb|ACY47012.1| dethiobiotin synthase [Rhodothermus marinus DSM 4252]
          Length = 241

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 31/118 (26%)

Query: 1   MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTR--------EPGGTP-----A 46
           MN GL ++  G + G GKT   + L R L    Y V V +         PG  P      
Sbjct: 1   MN-GLLVT--GTDTGVGKTVVAAGLARLLHEAGYRVGVLKPVETGWEGPPGNWPPDARML 57

Query: 47  AEAARHVLLSCGVDEFGA--EAEAI--VFAAARL------DHVENVIRPALMEGKILL 94
           AE AR   +    ++      AE +  + AA R       + +E   R  L +   +L
Sbjct: 58  AEGAR---VDNPPEQVAPCVYAEPLAPLVAARRAGRPVDLERIEAAWR-WLQDRDWVL 111


>gi|218185275|gb|EEC67702.1| hypothetical protein OsI_35171 [Oryza sativa Indica Group]
          Length = 1474

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 8    SFEGIE--------GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
            +FEG +        G+GKTT I  L R ++     + +      T      R  L
Sbjct: 1252 TFEGGDKIGIVGRTGSGKTTLIGALFRLVEPAGGKIIIDSADITTIGLHDLRSCL 1306


>gi|62701649|gb|AAX92722.1| ABC transporter, putative [Oryza sativa Japonica Group]
 gi|222615539|gb|EEE51671.1| hypothetical protein OsJ_33016 [Oryza sativa Japonica Group]
          Length = 1474

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 8    SFEGIE--------GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
            +FEG +        G+GKTT I  L R ++     + +      T      R  L
Sbjct: 1252 TFEGGDKIGIVGRTGSGKTTLIGALFRLVEPAGGKIIIDSADITTIGLHDLRSCL 1306


>gi|15604599|ref|NP_221117.1| guanylate kinase [Rickettsia prowazekii str. Madrid E]
 gi|6225591|sp|Q9ZCH7|KGUA_RICPR RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|3861294|emb|CAA15193.1| GUANYLATE KINASE (gmk) [Rickettsia prowazekii]
 gi|292572413|gb|ADE30328.1| Guanylate kinase [Rickettsia prowazekii Rp22]
          Length = 197

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 39/213 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
           N GL I      G GK++    L +        +   TR+P          +        
Sbjct: 5   NKGLIIILSSPSGTGKSSLAKELLKIDNNLRLSISVTTRKPRLGEVDGINYYFKSDREFK 64

Query: 61  EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
               + + + +A    D+    +  ++  L +G  +L D        +QG R   +    
Sbjct: 65  TLVKQNKFLEYAKIYNDYYGTPKEYVKMLLKQGFDVLFD------IDWQGVRSIKK---- 114

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
                 +   V    TI + LP   +I  +R++NR +  E       +            
Sbjct: 115 ------NTNNV---ITIFI-LPPSIEILEQRLRNRATDNEETIKLRMQSAQN-------- 156

Query: 176 IFLDIARNQPDRCHIV--DSAHSFQSVATNILN 206
              +I+        ++  D + + + +   I+ 
Sbjct: 157 ---EISHANEYDYVVINDDFSQTLKKIHEIIVA 186


>gi|332140749|ref|YP_004426487.1| adenylylsulfate kinase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550771|gb|AEA97489.1| adenylylsulfate kinase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 198

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 52/148 (35%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T  +LL++ L  +N   +                 LL       G   +   
Sbjct: 33  GLSGSGKSTLANLLEKKLHEQNKHTY-----------------LLDGDNVRHGLCGDLGF 75

Query: 71  FAAARLDHVE---NVIRPALMEGKILL--------CDR-FLDSSYAYQGERDSSQHLFLD 118
               R++++     V +  +  G ++L         DR +  S           +  F++
Sbjct: 76  SDKDRVENIRRISEVAKLFVDAGTLVLTAFISPFKADRDYCRSLM--------EEGEFVE 127

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
                          + +D P+++  KR
Sbjct: 128 ---------------VFVDTPLEVCEKR 140


>gi|322804865|emb|CBZ02422.1| putative ABC transporter component [Clostridium botulinum H04402
           065]
          Length = 726

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 3   SGLFISFEGIEGAGKTTHISLL 24
           SG +I+  G  G GK+T + LL
Sbjct: 508 SGQYIAITGPTGCGKSTLLRLL 529


>gi|257095545|ref|YP_003169186.1| signal recognition particle-docking protein FtsY [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048069|gb|ACV37257.1| signal recognition particle-docking protein FtsY [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 329

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 16/36 (44%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           +    I   G+ GAGKTT I  L +  Q     V +
Sbjct: 127 HRPFIIMIAGVNGAGKTTSIGKLAKHFQAHGLSVLL 162


>gi|302520459|ref|ZP_07272801.1| ABC transporter ATP-binding protein [Streptomyces sp. SPB78]
 gi|302429354|gb|EFL01170.1| ABC transporter ATP-binding protein [Streptomyces sp. SPB78]
          Length = 1194

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 7/93 (7%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LS 56
            +++G  I+  G  GAGKTT   +L RFL  +     V   P      +A R ++      
Sbjct: 946  LDAGRRIAVVGASGAGKTTLAHVLLRFLDAEGGTYRVGDTPATALDGDAVREIVGLCAQD 1005

Query: 57   CGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89
              V +       ++   AR D  E  +R  L  
Sbjct: 1006 VHVFDRSVRENLLL---ARKDATEAELRAVLSR 1035


>gi|256545244|ref|ZP_05472609.1| cytidylate kinase [Anaerococcus vaginalis ATCC 51170]
 gi|256399071|gb|EEU12683.1| cytidylate kinase [Anaerococcus vaginalis ATCC 51170]
          Length = 216

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M++   I+ +G  G+GK+T  ++L + L+
Sbjct: 1  MSN-FIIALDGPSGSGKSTIANILAKKLK 28


>gi|229019586|ref|ZP_04176402.1| Iron compound ABC transporter, ATP-binding protein [Bacillus
          cereus AH1273]
 gi|229025826|ref|ZP_04182225.1| Iron compound ABC transporter, ATP-binding protein [Bacillus
          cereus AH1272]
 gi|228735534|gb|EEL86130.1| Iron compound ABC transporter, ATP-binding protein [Bacillus
          cereus AH1272]
 gi|228741752|gb|EEL91936.1| Iron compound ABC transporter, ATP-binding protein [Bacillus
          cereus AH1273]
          Length = 256

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT 44
          + +G  +S  G  G+GK+T + L+ R L++   D+ +  E   T
Sbjct: 8  IKAGEIVSLIGPNGSGKSTLLRLIARLLKQSEGDIILDGENIHT 51


>gi|300361295|ref|ZP_07057472.1| excision endonuclease subunit UvrA [Lactobacillus gasseri JV-V03]
 gi|300353914|gb|EFJ69785.1| excision endonuclease subunit UvrA [Lactobacillus gasseri JV-V03]
          Length = 953

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G F+   G+ G+GK+T ++L LKR L +K
Sbjct: 629 GKFVVVTGVSGSGKSTLVNLILKRALAQK 657


>gi|261419393|ref|YP_003253075.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           Y412MC61]
 gi|319766208|ref|YP_004131709.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           Y412MC52]
 gi|261375850|gb|ACX78593.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           Y412MC61]
 gi|317111074|gb|ADU93566.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           Y412MC52]
          Length = 328

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    +  G + 
Sbjct: 125 ILFVGVNGVGKTTTIGKLAHKLKSEGKSVLLAA--GDTFRAGAIEQ--LEAWGERVGVDV 180

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
                 +     + + I+ A   G  +LLCD
Sbjct: 181 IKQAAGSDPAAVMYDAIQAAKARGVDVLLCD 211


>gi|218887467|ref|YP_002436788.1| ABC transporter [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758421|gb|ACL09320.1| ABC transporter related [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 660

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 17/81 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGTPAAEAAR 51
           I+  G  G GK+T + ++   L++    V +               T  P GT  +E  R
Sbjct: 352 IALAGPNGCGKSTLLKVIGGRLEKSGGTVVMGTLVRMGFFSQHQLETLNPSGTVLSEIRR 411

Query: 52  HVLLSCGVDEFGAEAEAIVFA 72
             L      E    +   +F 
Sbjct: 412 --LSDPRTTEEELMSVLGLFL 430


>gi|218663656|ref|ZP_03519586.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli IE4771]
          Length = 359

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|254172880|ref|ZP_04879554.1| conserved hypothetical protein [Thermococcus sp. AM4]
 gi|214033036|gb|EEB73864.1| conserved hypothetical protein [Thermococcus sp. AM4]
          Length = 448

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 18/124 (14%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     + + LQ   Y V   R P   P  +  + V+      E   + E  +   
Sbjct: 134 GCGKSQTSRKVAQLLQEMGYKVVAIRHP--MPYGDLRKQVVQRFASFEDLDKYECTIEE- 190

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV---MP 130
                      P +  G ++       +   Y+     ++      L +    +     P
Sbjct: 191 ------REEYEPYIERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFYEP 238

Query: 131 DCTI 134
           D  I
Sbjct: 239 DLWI 242


>gi|218233151|ref|YP_002368468.1| hypothetical protein BCB4264_A3764 [Bacillus cereus B4264]
 gi|218161108|gb|ACK61100.1| conserved hypothetical protein [Bacillus cereus B4264]
          Length = 192

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 49/222 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           IS +G   +GKTT      + L+++ +       P   P  E  + + L           
Sbjct: 5   ISLQGPMASGKTTL----AKRLEKRGFRAIY-ENP--YPIVEKRKKLNLDMNSKVG---- 53

Query: 67  EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118
               F   +   +E  I+     +  +++ DR       F        GE    +    D
Sbjct: 54  ----FIMNQKMFMEAKIKEFQNVKDSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 109

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L ++  +E   D    LD+      K V +R +   +     FE +             
Sbjct: 110 ELYKL--RECRSDVIFYLDVT----KKNVYDRKNNDRTRNRSTFEEQ------------F 151

Query: 179 DIARNQPDRCHI-----VDSAHSFQSVATNILNIVWELVQKR 215
            +A  + D         VD+      +  ++     + +++R
Sbjct: 152 KLAETEKDWYKQFPVTYVDTNR---LIVDDLEVYFMDWLKER 190


>gi|218235050|ref|YP_002368022.1| ABC transporter, ATP-binding protein [Bacillus cereus B4264]
 gi|218163007|gb|ACK62999.1| ABC transporter, ATP-binding protein [Bacillus cereus B4264]
          Length = 551

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 8/96 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN-------YDVHVTREPGGTPAAEAARHVL 54
             G FI+  G  G+GKTT +   K+ L           Y+  +  E     +A+    V 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGTRSGEIFYEGVLIEEVADLLSAQEIGMVF 89

Query: 55  LSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALME 89
            +           + + F+   +    ++I+  + E
Sbjct: 90  QNPENQIVMDTVIQELAFSLENIGLPSHIIQKRIAE 125


>gi|159026035|emb|CAO88772.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|159028186|emb|CAO89793.1| adk1 [Microcystis aeruginosa PCC 7806]
          Length = 188

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 65/228 (28%), Gaps = 63/228 (27%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M+  + + F G  G+GK T  + L   L         T         E  R  +      
Sbjct: 1   MSKRIGVIFLGPPGSGKGTQAAKLAESLT---IPHIST--------GEILRQAITEKTEL 49

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK----ILLCDRFLDSSYAYQGERDSSQHLF 116
              A+A          + +  +I+  L +       +L D F  +    Q     +    
Sbjct: 50  GQQAQAYVEKGELVPDELLLGLIQERLKQPDSAKGWIL-DGFPRT--VAQASFLDALLEE 106

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----------------LD 160
           L       V   +PD T+++        +R+  R    ++                  LD
Sbjct: 107 LADSYTFVVNLAVPD-TVLI--------ERLMQRGRQDDTKETISRRLQVYIDQTAPVLD 157

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           Y+ +K  + H                    +D      +V   +  +V
Sbjct: 158 YYGQKGTLNH--------------------IDGNQPMDTVTAALTAVV 185


>gi|146325080|sp|Q9CP06|POTA_PASMU RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
          Length = 370

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLLA 57


>gi|16127646|ref|NP_422210.1| hypothetical protein CC_3416 [Caulobacter crescentus CB15]
 gi|221236465|ref|YP_002518902.1| polyphosphate kinase [Caulobacter crescentus NA1000]
 gi|13425130|gb|AAK25378.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220965638|gb|ACL96994.1| polyphosphate kinase [Caulobacter crescentus NA1000]
          Length = 253

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 25/174 (14%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            + FEG + AGK   I+ +   L R+   V    +P     +E          V+   A 
Sbjct: 33  LVVFEGRDAAGKDGVIARITEHLSRRATTVVALPKPTDRERSEW----YFQRYVEWLPAC 88

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
            EA++F   R  +    +          + D    S+   Q +       F   L E  +
Sbjct: 89  GEAVLF--NRSWYNRAGVER--------VMD---FSTPQQQEQFLRDVPAFERMLVENGM 135

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLR----ESACLDYFERKDVMIHEKRRQ 175
           + V       LD+  +   KR+++R        +++ LD   ++    + K R 
Sbjct: 136 RYVK----FWLDISREEQAKRLKSRREDPLKAFKTSPLDAVAQEKWDDYTKARD 185


>gi|82749908|ref|YP_415649.1| ABC transporter ATP-binding protein [Staphylococcus aureus RF122]
 gi|82655439|emb|CAI79826.1| ABC transporter ATP-binding protein [Staphylococcus aureus RF122]
          Length = 226

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 18/24 (75%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N+G FI+  G  G+GK+T I++L
Sbjct: 28 INAGEFIAIMGPSGSGKSTLINIL 51


>gi|24111548|ref|NP_706058.1| dephospho-CoA kinase [Shigella flexneri 2a str. 301]
 gi|30061670|ref|NP_835841.1| dephospho-CoA kinase [Shigella flexneri 2a str. 2457T]
 gi|110804166|ref|YP_687686.1| dephospho-CoA kinase [Shigella flexneri 5 str. 8401]
 gi|51315901|sp|Q7C397|COAE_SHIFL RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|24050307|gb|AAN41765.1| putative DNA repair protein [Shigella flexneri 2a str. 301]
 gi|30039912|gb|AAP15646.1| putative DNA repair protein [Shigella flexneri 2a str. 2457T]
 gi|110613714|gb|ABF02381.1| putative DNA repair protein [Shigella flexneri 5 str. 8401]
 gi|313646515|gb|EFS10976.1| dephospho-CoA kinase [Shigella flexneri 2a str. 2457T]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 38/221 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ++  G  G+GK+T  +           +V           A+     ++  G     
Sbjct: 2   GYIVALTGGIGSGKSTVANAFADL----GINVI---------DADIIARQVVEPGAPALH 48

Query: 64  AEAEAI---VFAAA---RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           A A+     + AA    +   +   I     E    L D  L      + +    Q    
Sbjct: 49  AIADHFGENMIAADGTLQRRALRERIFANPEEKNW-LND-LLHPLIQQETQHQIQQATSP 106

Query: 118 DSLQ---EISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             L     +    +    +  +++D+  +  LKR   R  +           + ++  + 
Sbjct: 107 YVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQA 160

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            R+  L +A +      ++D+  +  ++A+++  +    +Q
Sbjct: 161 TREARLAVADD------VIDNNGAPDAIASDVARLHAHYLQ 195


>gi|329767153|ref|ZP_08258681.1| hypothetical protein HMPREF0428_00378 [Gemella haemolysans M341]
 gi|328837878|gb|EGF87503.1| hypothetical protein HMPREF0428_00378 [Gemella haemolysans M341]
          Length = 331

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
            I F G  G+GK+T +  L   L  ++  +    +P
Sbjct: 141 LILFSGPTGSGKSTSMYKLASELASRDKQIITVEDP 176


>gi|302534282|ref|ZP_07286624.1| lipid A export permease/ATP-binding protein MsbA [Streptomyces sp.
           C]
 gi|302443177|gb|EFL14993.1| lipid A export permease/ATP-binding protein MsbA [Streptomyces sp.
           C]
          Length = 640

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 15/105 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV--------HVTREPGGTPAAEAARHVLLSCG 58
           ++  G  GAGKTT ++LL RF +    ++         +TRE          +   L  G
Sbjct: 424 VAIVGPTGAGKTTLVNLLMRFYEVTGGEIALDGVDIAKMTREELRGGIGMVLQDTWLFGG 483

Query: 59  VDEFG-------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
                           A +  A+R  H +  IR        +L D
Sbjct: 484 TIAENIAYGASREVTRAEIEEASRAAHADRFIRTLPDGYDTVLDD 528


>gi|296410862|ref|XP_002835154.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295627929|emb|CAZ79275.1| unnamed protein product [Tuber melanosporum]
          Length = 233

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 12/26 (46%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
            IS  GI G+GKTT    +   L  
Sbjct: 25 FLISVSGIPGSGKTTLAKKVAERLNA 50


>gi|289191852|ref|YP_003457793.1| dethiobiotin synthase [Methanocaldococcus sp. FS406-22]
 gi|288938302|gb|ADC69057.1| dethiobiotin synthase [Methanocaldococcus sp. FS406-22]
          Length = 214

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 6  FISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPAAEAARHVLL-SCGVDE 61
          FI+  G + G GKT   S+L   L++   +V   +  E GG       +++L  +  +D 
Sbjct: 3  FIT--GTDTGVGKTYVSSILAENLKKMGVNVGYLKPVETGGREDTLTLKNILKTNDDLDL 60

Query: 62 FGA 64
             
Sbjct: 61 MNP 63


>gi|229824274|ref|ZP_04450343.1| hypothetical protein GCWU000282_01579 [Catonella morbi ATCC 51271]
 gi|229786247|gb|EEP22361.1| hypothetical protein GCWU000282_01579 [Catonella morbi ATCC 51271]
          Length = 311

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 75/234 (32%), Gaps = 50/234 (21%)

Query: 11  GIEGA---GKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           GI G+   GK+T   +L   L R   +     +T +    P AE  R  +L         
Sbjct: 91  GISGSVAVGKSTTARVLHELLSRTYPERKVALMTTDGFLYPNAELIRRGILGRKGFPDSY 150

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121
           +   ++    R+   +  +   +   ++       D     +   +    L ++ +    
Sbjct: 151 DMPRLLDFMQRIKTRKGPVSYPVYSHQV------YDVLVGQEAVMEDPDILIVEGINVLQ 204

Query: 122 -----EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
                ++ V +   D +I +D                 +   ++ FE             
Sbjct: 205 LPQNQKLYVSDFF-DVSIYIDANP-----------VHIQRWYMERFEL------------ 240

Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ-----KRVSPLSSKKDI 225
            LD+A+  P   +  + +   +  A    N  W+ +      + ++P   + D+
Sbjct: 241 LLDLAKQDPHNYYF-ELSQKPREQARQYANEAWQTINLVNLIQNIAPTRERADL 293


>gi|227826815|ref|YP_002828594.1| ABC transporter [Sulfolobus islandicus M.14.25]
 gi|227458610|gb|ACP37296.1| ABC transporter related [Sulfolobus islandicus M.14.25]
          Length = 285

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVL 54
          FI   G  GAGKTT I +L   L++    V V  E P   P       V+
Sbjct: 33 FI---GSNGAGKTTTIKILAGLLRKDGGKVKVFGEDPWDNPKVIEMISVI 79


>gi|225850967|ref|YP_002731201.1| signal recognition particle protein [Persephonella marina EX-H1]
 gi|225645352|gb|ACO03538.1| signal recognition particle protein [Persephonella marina EX-H1]
          Length = 442

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 16/115 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVDEFGAEAEAI 69
           G++G GKTT    L ++L+ K Y V +       P A +    +  +  V  F  E E  
Sbjct: 106 GLQGTGKTTTAGKLAKWLKSKGYKVGLVSTDVRRPAAGKQLCTLAKTIDVPCFIDEEE-- 163

Query: 70  VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 +   E VI+ A   G   ++ D            R       +D L  I
Sbjct: 164 ---KDAVRLTEKVIQKAKEAGLSHIILD---------TAGRLHIDQELMDELVHI 206


>gi|196047027|ref|ZP_03114246.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus 03BB108]
 gi|225863895|ref|YP_002749273.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus 03BB102]
 gi|229184170|ref|ZP_04311379.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus BGSC 6E1]
 gi|196022131|gb|EDX60819.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus 03BB108]
 gi|225785806|gb|ACO26023.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus 03BB102]
 gi|228599285|gb|EEK56896.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus BGSC 6E1]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 KKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|254303488|ref|ZP_04970846.1| adenylyl-sulfate kinase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323680|gb|EDK88930.1| adenylyl-sulfate kinase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 165

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 32/148 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M    +I+  G+ GAGKTT    L   L+ +   +            +  R +      +
Sbjct: 1   MGRVFWIT--GLSGAGKTTIGYFLYTKLKTQKNPIVFL-------DGDELRKIF----GN 47

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + G   E  + +A R   +  ++     +G  ++C     S +              D++
Sbjct: 48  DLGYSKEDRLKSAIRNSRLCKLLS---DQGIDVIC--CTISMF--------------DAI 88

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ 148
           +E + + +     I LD+ ++    R  
Sbjct: 89  REWNRENIKNYFEIYLDVSLETLKDRKN 116


>gi|146098831|ref|XP_001468482.1| p-glycoprotein [Leishmania infantum]
 gi|134072850|emb|CAM71566.1| p-glycoprotein [Leishmania infantum JPCM5]
          Length = 1341

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 18/100 (18%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV--LLSC 57
            M +GL     G  G GK+T I +L RF  +R        ++      AE  R++  +L  
Sbjct: 1126 MANGLM----GQTGCGKSTIIQMLARFYDRRSGLICVNGKDLSSLDIAEWRRNISVVLQE 1181

Query: 58   GVDEFGAEAEAIVFA-----------AARLDHVENVIRPA 86
                 G   E I +A           AARL H+   I   
Sbjct: 1182 PNLFSGTVRENIRYAREDATDEEVEEAARLAHIHWEIMKW 1221


>gi|91209166|ref|YP_539152.1| dephospho-CoA kinase [Escherichia coli UTI89]
 gi|117622387|ref|YP_851300.1| dephospho-CoA kinase [Escherichia coli APEC O1]
 gi|218557042|ref|YP_002389955.1| dephospho-CoA kinase [Escherichia coli S88]
 gi|237704251|ref|ZP_04534732.1| dephospho-CoA kinase [Escherichia sp. 3_2_53FAA]
 gi|91070740|gb|ABE05621.1| dephospho-CoA kinase [Escherichia coli UTI89]
 gi|115511511|gb|ABI99585.1| dephospho-CoA kinase [Escherichia coli APEC O1]
 gi|218363811|emb|CAR01471.1| dephospho-CoA kinase [Escherichia coli S88]
 gi|226902163|gb|EEH88422.1| dephospho-CoA kinase [Escherichia sp. 3_2_53FAA]
 gi|294491522|gb|ADE90278.1| dephospho-CoA kinase [Escherichia coli IHE3034]
 gi|307629675|gb|ADN73979.1| dephospho-CoA kinase [Escherichia coli UM146]
 gi|315285152|gb|EFU44597.1| dephospho-CoA kinase [Escherichia coli MS 110-3]
 gi|323950902|gb|EGB46779.1| dephospho-CoA kinase [Escherichia coli H252]
 gi|323955300|gb|EGB51073.1| dephospho-CoA kinase [Escherichia coli H263]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|40889941|pdb|1VHL|A Chain A, Crystal Structure Of Dephospho-Coa Kinase With
           Adenosine-5'- Diphosphate
 gi|40889942|pdb|1VHL|B Chain B, Crystal Structure Of Dephospho-Coa Kinase With
           Adenosine-5'- Diphosphate
 gi|40889943|pdb|1VHL|C Chain C, Crystal Structure Of Dephospho-Coa Kinase With
           Adenosine-5'- Diphosphate
 gi|40889952|pdb|1VHT|A Chain A, Crystal Structure Of Dephospho-Coa Kinase With
           Bis(Adenosine)-5'-Triphosphate
 gi|40889953|pdb|1VHT|B Chain B, Crystal Structure Of Dephospho-Coa Kinase With
           Bis(Adenosine)-5'-Triphosphate
 gi|40889954|pdb|1VHT|C Chain C, Crystal Structure Of Dephospho-Coa Kinase With
           Bis(Adenosine)-5'-Triphosphate
 gi|40890021|pdb|1VIY|A Chain A, Crystal Structure Of Dephospho-Coa Kinase
 gi|40890022|pdb|1VIY|B Chain B, Crystal Structure Of Dephospho-Coa Kinase
 gi|40890023|pdb|1VIY|C Chain C, Crystal Structure Of Dephospho-Coa Kinase
          Length = 218

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 129 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 176

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 177 NNGAPDAIASDVARLHAHYLQ 197


>gi|21672679|ref|NP_660746.1| adenylylsulfate kinase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25090056|sp|Q8K9D4|CYSC_BUCAP RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|21623317|gb|AAM67957.1| adenylylsulfate kinase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 211

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 53/143 (37%), Gaps = 34/143 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G+GK++  + L+  L + N++ +                 LL          +
Sbjct: 32  IWFTGLSGSGKSSIANSLEEILFQNNFNTY-----------------LLDGDNIRSSLCS 74

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +       R +++     V +  +  G I+L    + S Y  Q ++       ++ L+  
Sbjct: 75  DLSFSILDRNENIRRIGEVSKLMIDAGIIVLV--SVISPYRNQRKKIRLMLGKINFLE-- 130

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
                     + +D P++I  +R
Sbjct: 131 ----------VFVDTPLNICEER 143


>gi|28377053|ref|NP_783945.1| cobalt ABC transporter, ATP-binding protein (putative)
          [Lactobacillus plantarum WCFS1]
 gi|308179271|ref|YP_003923399.1| cobalt ABC transporter, ATP-binding protein (putative)
          [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|56748774|sp|Q890D1|Y100_LACPL RecName: Full=Putative ABC transporter ATP-binding protein
          lp_0100
 gi|28269884|emb|CAD62781.1| cobalt ABC transporter, ATP-binding protein (putative)
          [Lactobacillus plantarum WCFS1]
 gi|308044762|gb|ADN97305.1| cobalt ABC transporter, ATP-binding protein (putative)
          [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 243

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          NSG FI   G  G+GK+T + LL
Sbjct: 27 NSGDFICLMGPNGSGKSTLLRLL 49


>gi|325968148|ref|YP_004244340.1| GTP-binding signal recognition particle SRP54 G- domain
           [Vulcanisaeta moutnovskia 768-28]
 gi|323707351|gb|ADY00838.1| GTP-binding signal recognition particle SRP54 G- domain
           [Vulcanisaeta moutnovskia 768-28]
          Length = 446

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           + I   GIEG+GKTT  + L RF  ++N  V +       P A
Sbjct: 105 MLI---GIEGSGKTTTAAKLARFYIKRNLKVGLIETDTYRPGA 144


>gi|317055348|ref|YP_004103815.1| hypothetical protein Rumal_0632 [Ruminococcus albus 7]
 gi|315447617|gb|ADU21181.1| hypothetical protein Rumal_0632 [Ruminococcus albus 7]
          Length = 361

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 3/100 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G    GK+T +SL+ +   +  Y V    E                    +F    
Sbjct: 6   IVITGGPCGGKSTAMSLIMKEFDKLGYTVLFVPETASELIGGGV-APWTCGRNVDFQKCL 64

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106
            A+     R+            +  +++CDR    + AY 
Sbjct: 65  FALQLEKERV--FRQAAMTMGKDKYLIVCDRGALDNKAYM 102


>gi|299538551|ref|ZP_07051834.1| cytidylate kinase [Lysinibacillus fusiformis ZC1]
 gi|298726138|gb|EFI66730.1| cytidylate kinase [Lysinibacillus fusiformis ZC1]
          Length = 224

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   + I+ +G  GAGK+T   ++   L
Sbjct: 1  MKKNIQIAIDGPAGAGKSTIAKIVAEAL 28


>gi|299769869|ref|YP_003731895.1| signal recognition particle-docking protein FtsY [Acinetobacter sp.
           DR1]
 gi|298699957|gb|ADI90522.1| signal recognition particle-docking protein FtsY [Acinetobacter sp.
           DR1]
          Length = 370

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 173 GVNGVGKTTTIGKLAKRLQGEGKKVMLAA--GDTFRAAATEQLQIWGERNDISVVAQG-- 228

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 229 HGADSASVIFDAFESARAKGIDVLIAD 255


>gi|254562641|ref|YP_003069736.1| gluconokinase; gluconate transport, GNT I system [Methylobacterium
           extorquens DM4]
 gi|254269919|emb|CAX25897.1| gluconokinase; gluconate transport, GNT I system [Methylobacterium
           extorquens DM4]
          Length = 180

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 19/106 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQ---RKNYDVHVT----REPGGTPAAEAARHVLLSCGVDEFG 63
           G+ G+GK+T  +LL   L        D H      R   G P  +AAR   L        
Sbjct: 16  GVSGSGKSTVAALLAERLGWTFADGDDFHTPESIARMRDGHPLDDAARQPWLGRIRAWID 75

Query: 64  AEAEA---------IVFAAARLDHVENVIR---PALMEGKILLCDR 97
           A  EA          +  A R   + +  R     L   + ++ DR
Sbjct: 76  ARIEAGENAVVACSALKRAYRRALIGDPQRVRIVFLEGSRAVIQDR 121


>gi|257068667|ref|YP_003154922.1| shikimate kinase [Brachybacterium faecium DSM 4810]
 gi|256559485|gb|ACU85332.1| shikimate kinase [Brachybacterium faecium DSM 4810]
          Length = 204

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 10/90 (11%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            I LD+   I  +R+ +          D   R   +  E+    + ++A         +D
Sbjct: 98  VIWLDVDEAIAARRLAHGSGRPLLQGEDPMGRWRELARERSP-RYRELAA------LRID 150

Query: 193 SA-HSFQSVATNILNIVWELVQKRVSPLSS 221
           +   S   VA  IL  +   ++ R  P  +
Sbjct: 151 AGHGSPARVARAILGTLQ--LEPRTRPDQA 178


>gi|229000394|ref|ZP_04159950.1| hypothetical protein bmyco0003_49370 [Bacillus mycoides Rock3-17]
 gi|228759351|gb|EEM08341.1| hypothetical protein bmyco0003_49370 [Bacillus mycoides Rock3-17]
          Length = 1420

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G  G+GK+T        L  K   V   R P
Sbjct: 430 GGPGSGKSTLARRAVNRLTAKGEKVLYVRLP 460


>gi|257125479|ref|YP_003163593.1| cytidylate kinase [Leptotrichia buccalis C-1013-b]
 gi|257049418|gb|ACV38602.1| cytidylate kinase [Leptotrichia buccalis C-1013-b]
          Length = 217

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  G+GK+T   L+   L
Sbjct: 1  MIIAIDGPAGSGKSTIAKLIAEDL 24


>gi|218197446|gb|EEC79873.1| hypothetical protein OsI_21375 [Oryza sativa Indica Group]
 gi|222634844|gb|EEE64976.1| hypothetical protein OsJ_19890 [Oryza sativa Japonica Group]
          Length = 617

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFL 28
             GL I   G+ G GK+T  +LL   L
Sbjct: 430 RPGLAIVIMGVSGCGKSTVAALLAETL 456


>gi|209528070|ref|ZP_03276548.1| Adenylyl-sulfate kinase [Arthrospira maxima CS-328]
 gi|209491494|gb|EDZ91871.1| Adenylyl-sulfate kinase [Arthrospira maxima CS-328]
          Length = 196

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYD 34
          F G+ GAGKTT    +   L+ + Y 
Sbjct: 29 FTGLSGAGKTTISQAVAEKLKSQGYR 54


>gi|163843478|ref|YP_001627882.1| adenylate kinase [Brucella suis ATCC 23445]
 gi|189046007|sp|B0CH11|KAD_BRUSI RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|163674201|gb|ABY38312.1| adenylate kinase [Brucella suis ATCC 23445]
          Length = 194

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 71/218 (32%), Gaps = 53/218 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   LL    ++       T         +  R  +      E G  A+A++
Sbjct: 7   GPPGAGKGTQAGLLT---KKHGIPQLST--------GDMLRAAV--AQQSEIGKRAKAVM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFLDSLQEISV 125
                   V + I         ++ +R +D+      +   G   +       +L ++  
Sbjct: 54  ---DAGQLVSDEIVNQ------IVSER-IDAPDCANGFILDGYPRTVPQA--QALSQMLS 101

Query: 126 Q-EVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEKR--- 173
              +  D  I L +  +  +KR+++R          +R     + F ++ V   EK    
Sbjct: 102 GKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPL 161

Query: 174 ---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                   ++         +++     + VA  I  I+
Sbjct: 162 SSYYAGTGEL--------RVINGMAPVEEVAAEIERIL 191


>gi|153953990|ref|YP_001394755.1| guanylate kinase [Clostridium kluyveri DSM 555]
 gi|219854604|ref|YP_002471726.1| hypothetical protein CKR_1261 [Clostridium kluyveri NBRC 12016]
 gi|146346871|gb|EDK33407.1| Hypothetical protein CKL_1365 [Clostridium kluyveri DSM 555]
 gi|219568328|dbj|BAH06312.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 221

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 10/24 (41%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          M  GL I   G  G GK T    L
Sbjct: 1  MKKGLLIVISGPSGTGKGTICKEL 24


>gi|145615454|ref|XP_360221.2| hypothetical protein MGG_05595 [Magnaporthe oryzae 70-15]
 gi|145022273|gb|EDK06293.1| hypothetical protein MGG_05595 [Magnaporthe oryzae 70-15]
          Length = 982

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 21/96 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------------------LQRKNYDVHVTREPGG 43
            G F +  G  G+GKTT ISLL+RF                   L+    ++ +  +   
Sbjct: 762 KGQFAAVVGPSGSGKTTVISLLERFYNATTGSISYNGVEISHLCLRDYRREISLVAQEAC 821

Query: 44  TPAAEAARHVLLSCGVDEFGAE--AEAIVFAAARLD 77
                   ++LL    D+  A+   EA++ A    +
Sbjct: 822 IFDGSIRENILLGVEEDQMPAKKLEEALIQACCDAE 857


>gi|159363|gb|AAA02977.1| P-glycoprotein [Leishmania donovani]
          Length = 1341

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 18/100 (18%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV--LLSC 57
            M +GL     G  G GK+T I +L RF  +R        ++      AE  R++  +L  
Sbjct: 1126 MANGLM----GQTGCGKSTIIQMLARFYDRRSGLICVNGKDLSSLDIAEWRRNISVVLQE 1181

Query: 58   GVDEFGAEAEAIVFA-----------AARLDHVENVIRPA 86
                 G   E I +A           AARL H+   I   
Sbjct: 1182 PNLFSGTVRENIRYAREDATDEEVEEAARLAHIHWEIMKW 1221


>gi|83593945|ref|YP_427697.1| hypothetical protein Rru_A2613 [Rhodospirillum rubrum ATCC 11170]
 gi|83576859|gb|ABC23410.1| conserved hypothetical protein [Rhodospirillum rubrum ATCC 11170]
          Length = 512

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 31/148 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+     +   L             G  P A   R  +L   +           
Sbjct: 343 GLSGSGKSRLAREIAPHL-------------GCAPGALVLRTDVLRKRLMGLSPYQSLGP 389

Query: 71  ------FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
                   A     +E   R AL  G  ++ D               ++     + + I+
Sbjct: 390 EGYTPEMHARTYQRLEAEARLALACGHSVVLD------------GVHARPGERANAERIA 437

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYS 152
            +  +P   + +  PVD+ ++R++ R  
Sbjct: 438 AEAGVPFAGLWVHTPVDLAMRRIETRVR 465


>gi|89896597|ref|YP_520084.1| hypothetical protein DSY3851 [Desulfitobacterium hafniense Y51]
 gi|89336045|dbj|BAE85640.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 885

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          G F++  G  G GK+T +  LK  L      
Sbjct: 35 GQFVTLVGPSGCGKSTLLRQLKTVLAPHGVK 65


>gi|37521375|ref|NP_924752.1| bifunctional pantoate ligase/cytidylate kinase [Gloeobacter
           violaceus PCC 7421]
 gi|81710090|sp|Q7NJM6|PANCY_GLOVI RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|35212372|dbj|BAC89747.1| pantothenate synthetase [Gloeobacter violaceus PCC 7421]
          Length = 515

 Score = 36.2 bits (83), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL 28
           I+ +G  GAGK+T    L + L
Sbjct: 291 IAIDGPAGAGKSTLARRLAQRL 312


>gi|317492541|ref|ZP_07950969.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919533|gb|EFV40864.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 578

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT I +L   L+
Sbjct: 41 GPDGAGKTTLIRMLAGLLK 59


>gi|317122466|ref|YP_004102469.1| sulfate adenylyltransferase [Thermaerobacter marianensis DSM
          12885]
 gi|315592446|gb|ADU51742.1| sulfate adenylyltransferase [Thermaerobacter marianensis DSM
          12885]
          Length = 623

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          F G+ GAGK+T    +   L+++   V
Sbjct: 10 FTGLPGAGKSTLAREVAARLRQRGLPV 36


>gi|315281997|ref|ZP_07870505.1| macrolide export ATP-binding/permease protein MacB [Listeria
          marthii FSL S4-120]
 gi|313614359|gb|EFR87995.1| macrolide export ATP-binding/permease protein MacB [Listeria
          marthii FSL S4-120]
          Length = 233

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N G F+   G  GAGK+T +++L
Sbjct: 30 INKGEFVVIVGPSGAGKSTVLNIL 53


>gi|313904783|ref|ZP_07838156.1| ABC transporter transmembrane region [Eubacterium cellulosolvens 6]
 gi|313470386|gb|EFR65715.1| ABC transporter transmembrane region [Eubacterium cellulosolvens 6]
          Length = 445

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           ++  G  GAGK+T I+LL RF +    D+ +     GT   + +R  L  
Sbjct: 372 VAIVGPTGAGKSTLINLLTRFYEVNGGDIRI----DGTSIYDMSRKDLHD 417


>gi|304385210|ref|ZP_07367555.1| competence protein ComGA [Pediococcus acidilactici DSM 20284]
 gi|304328417|gb|EFL95638.1| competence protein ComGA [Pediococcus acidilactici DSM 20284]
          Length = 320

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL 28
            G+ I F G  G+GKTT I  + + L
Sbjct: 134 RGM-IVFSGPTGSGKTTLIYEIAKKL 158


>gi|302347856|ref|YP_003815494.1| adenylylsulfate kinase [Acidilobus saccharovorans 345-15]
 gi|302328268|gb|ADL18463.1| adenylylsulfate kinase [Acidilobus saccharovorans 345-15]
          Length = 180

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 20/88 (22%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ G+GKTT  +     L+   Y V                  +L         + EA  
Sbjct: 10 GLPGSGKTTIANAAAERLRAMGYRVE-----------------VLDGDWFRSHIDPEAGY 52

Query: 71 FAAARLDHV---ENVIRPALMEGKILLC 95
              R+ H+     V R     G I++C
Sbjct: 53 TKEERVRHLVRASWVARLLARNGVIVIC 80


>gi|284006183|emb|CBA71423.1| toxin transporter [Arsenophonus nasoniae]
          Length = 718

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR-FLQRKNY 33
           + +G FI   G  G+GK+T   LL+R ++ ++  
Sbjct: 497 IKAGQFIGITGPSGSGKSTLTKLLQRLYIPQQGQ 530


>gi|282850660|ref|ZP_06260039.1| ABC transporter, ATP-binding protein [Veillonella parvula ATCC
          17745]
 gi|282580153|gb|EFB85557.1| ABC transporter, ATP-binding protein [Veillonella parvula ATCC
          17745]
          Length = 599

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQR 30
          +  G   +  G +GAGKTT I L+   L  
Sbjct: 34 IRKGCLTALVGPDGAGKTTLIRLIAGLLDA 63


>gi|257866659|ref|ZP_05646312.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872824|ref|ZP_05652477.1| ABC transporter [Enterococcus casseliflavus EC10]
 gi|257876263|ref|ZP_05655916.1| ABC transporter [Enterococcus casseliflavus EC20]
 gi|257800617|gb|EEV29645.1| ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806988|gb|EEV35810.1| ABC transporter [Enterococcus casseliflavus EC10]
 gi|257810429|gb|EEV39249.1| ABC transporter [Enterococcus casseliflavus EC20]
          Length = 626

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 14/107 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN----YDVHVTREPGGTPAAEAARHVLLSC 57
            +G  ++  G  GAGKTT I+LL+RF         YD   TR+            VL   
Sbjct: 409 KAGEMVAIVGPTGAGKTTLINLLERFYDVSGGSIRYDGKDTRDLTRDELRSNISMVLQDT 468

Query: 58  --------GVDEFGAE--AEAIVFAAARLDHVENVIRPALMEGKILL 94
                       +G E   +  V AAA+  HV++ +R        +L
Sbjct: 469 WLFTGSIYDNIHYGNEKATKEQVIAAAKAAHVDDFVRKLPEGYDTVL 515


>gi|238750578|ref|ZP_04612078.1| Adenylyl-sulfate kinase [Yersinia rohdei ATCC 43380]
 gi|238711226|gb|EEQ03444.1| Adenylyl-sulfate kinase [Yersinia rohdei ATCC 43380]
          Length = 200

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 32  FTGLSGSGKSTLAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 74

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R +++     V +  +  G ++L         A+     + + +  D L   + 
Sbjct: 75  GFSDADRRENIRRVGEVAKLMVDAGLVVLT--------AFISPHRAERQMVRDML---AS 123

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            +      + +D P+ I   R
Sbjct: 124 GQF---IEVFVDTPLAICEAR 141


>gi|227485053|ref|ZP_03915369.1| cytidylate kinase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236886|gb|EEI86901.1| cytidylate kinase [Anaerococcus lactolyticus ATCC 51172]
          Length = 217

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ 29
          I+ +G  G+GK+T   +L + L 
Sbjct: 5  IAIDGPSGSGKSTVSEILAKKLN 27


>gi|323340592|ref|ZP_08080846.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Lactobacillus ruminis ATCC 25644]
 gi|323091998|gb|EFZ34616.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Lactobacillus ruminis ATCC 25644]
          Length = 231

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51
          FI+  G  G+GK+T + +  R L +   ++    E       +  R
Sbjct: 13 FITLSGPSGSGKSTILKICARMLTQSTGELIFEGEDAAKIPVDKYR 58


>gi|227524737|ref|ZP_03954786.1| deoxyguanosine kinase [Lactobacillus hilgardii ATCC 8290]
 gi|227088091|gb|EEI23403.1| deoxyguanosine kinase [Lactobacillus hilgardii ATCC 8290]
          Length = 149

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 31/153 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT    +   L                P  +     L      ++G   +      
Sbjct: 10  GVGKTTLTGKIAAHL---GTKAFF------EPVGDNPVLPLYYSNPKQYGFLLQIYFLNK 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
                   +I+ AL +   +L DR  + D+ +  +   D                  +  
Sbjct: 61  RFS-----MIKKALSDDNNVL-DRSIYEDALFTRENNADGNISDTELSVYLKLLDNMMTE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           L ++  +   PD  +  D   D    R++ R  
Sbjct: 115 LNQLPKKA--PDLLVYADSDFDTIKYRIKKRGR 145


>gi|224475796|ref|YP_002633402.1| putative ABC transporter ATP-binding protein [Staphylococcus
          carnosus subsp. carnosus TM300]
 gi|222420403|emb|CAL27217.1| putative ABC transporter ATP-binding protein [Staphylococcus
          carnosus subsp. carnosus TM300]
          Length = 253

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G FIS  G  G+GKTT ++LL
Sbjct: 32 KGEFISIMGPSGSGKTTLLNLL 53


>gi|218680392|ref|ZP_03528289.1| glycerol-3-phosphate transporter ATP-binding subunit [Rhizobium
          etli CIAT 894]
          Length = 158

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI   G  G GK+T + ++ 
Sbjct: 26 IQSGEFIVILGPSGCGKSTLLRMIA 50


>gi|157692275|ref|YP_001486737.1| signal recognition particle-docking protein [Bacillus pumilus
           SAFR-032]
 gi|157681033|gb|ABV62177.1| signal recognition particle-docking protein [Bacillus pumilus
           SAFR-032]
          Length = 328

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I F G+ G GKTT I  L   L+ +   V +    G T  A A   +
Sbjct: 123 ILFVGVNGVGKTTTIGKLANKLKNEGKSVILAA--GDTFRAGAIEQL 167


>gi|156547383|ref|XP_001603855.1| PREDICTED: similar to mCG141618 [Nasonia vitripennis]
          Length = 4040

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 14/93 (15%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
            G  G+GK+T +  L+    R     H    P  +P        +L+      G E    +
Sbjct: 1631 GPTGSGKSTVLRTLRDTYTRL----HEMEVP--SPYYRTVHMYVLNPKAVTIG-ELYGEI 1683

Query: 71   FAAARLDH---VENVIRPAL----MEGKILLCD 96
             AA+   H   +  +IR A      + + ++CD
Sbjct: 1684 HAASNEWHDGLLGVIIRHACGATTDDHQWVVCD 1716


>gi|119964124|ref|YP_949195.1| uridine kinase [Arthrobacter aurescens TC1]
 gi|119950983|gb|ABM09894.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
          Length = 232

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 37/165 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTRE---------PGGTPAAEA 49
             I+ +G++G+GK+T    L   +  +        D    RE         P G      
Sbjct: 36  RLIAIDGVDGSGKSTFARDLAAVIHERPVLIIHVDDFLHLREVRHRRGRDSPEGFWLDTY 95

Query: 50  ARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV-IRPAL-MEGKILLCDRFLDSSYAYQG 107
               L +  ++  G    A  +  A  DHV N+ + PAL    + +L             
Sbjct: 96  DYESLHNHVLEPLGKGG-AGAYRPAATDHVRNIRLSPALVQAPENVLV------------ 142

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
                + +FL   + +       D +I LD+P     +R+  R  
Sbjct: 143 ---LVEGMFLHRDELVGTW----DYSIFLDVPFHETARRMALRDG 180


>gi|73540815|ref|YP_295335.1| hypothetical protein Reut_A1113 [Ralstonia eutropha JMP134]
 gi|72118228|gb|AAZ60491.1| Protein of unknown function DUF344 [Ralstonia eutropha JMP134]
          Length = 364

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 27/94 (28%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      +  +   V    +P  +   +                  
Sbjct: 153 IVFEGRDAAGKGGTIKRFMEHMNPRGARVVALEKPTESERGQW----------------- 195

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 196 ----YFQRYVQHLP-------SAGEIVLFDRSWY 218


>gi|332086643|gb|EGI91783.1| hypothetical protein SB521682_3577 [Shigella boydii 5216-82]
          Length = 232

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53
           I+  G +G+GK+T  + L   L  +    H+          E    +             
Sbjct: 12  IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71

Query: 54  ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98
               +        G     +++  +  R      ++  +  +G +L+ DR+
Sbjct: 72  KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGFLLITDRY 121


>gi|320096199|ref|ZP_08027787.1| signal recognition particle protein [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976864|gb|EFW08619.1| signal recognition particle protein [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 536

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L ++L+ +   V + 
Sbjct: 107 GLQGAGKTTLAGKLGKWLREEGKTVMLV 134


>gi|332159847|ref|YP_004296424.1| cell division protein [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318607607|emb|CBY29105.1| signal recognition particle receptor protein FtsY (=alpha subunit)
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664077|gb|ADZ40721.1| cell division protein [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 481

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 284 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGDRNKIAVVAQH-- 339

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 340 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 385


>gi|313773532|gb|EFS39498.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL074PA1]
 gi|313811585|gb|EFS49299.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL083PA1]
 gi|313831327|gb|EFS69041.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL007PA1]
 gi|313834937|gb|EFS72651.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL056PA1]
 gi|314974202|gb|EFT18298.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL053PA1]
 gi|315081261|gb|EFT53237.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL078PA1]
 gi|315095341|gb|EFT67317.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL038PA1]
 gi|327444938|gb|EGE91592.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL043PA1]
          Length = 261

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V   RE  G         +    S     
Sbjct: 38  GPNGAGKTTMLAVLTGIKRPRAGMLRRDGQPVRRRREGSGYRAHIGYVPQECTWSPSWP- 96

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D  +   +A+Q     S         
Sbjct: 97  ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSDLNV-GQFAHQPIGTLSGGQKRRVFL 149

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 150 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 186


>gi|315049071|ref|XP_003173910.1| leptomycin B resistance protein pmd1 [Arthroderma gypseum CBS 118893]
 gi|311341877|gb|EFR01080.1| leptomycin B resistance protein pmd1 [Arthroderma gypseum CBS 118893]
          Length = 1290

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
              G F++  G  G GK+T ISLL+RF       + V  +   T      R ++
Sbjct: 1074 RPGCFVALVGPSGCGKSTVISLLERFFDPSTGQILVDSQDISTLNVNDYRRLI 1126


>gi|302344132|ref|YP_003808661.1| cytidylate kinase [Desulfarculus baarsii DSM 2075]
 gi|301640745|gb|ADK86067.1| cytidylate kinase [Desulfarculus baarsii DSM 2075]
          Length = 222

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + ++ +G  GAGKTT    +   L
Sbjct: 1  MIVTIDGPSGAGKTTVSKAVADEL 24


>gi|290562241|gb|ADD38517.1| Protein KTI12 homolog [Lepeophtheirus salmonis]
          Length = 283

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 15/92 (16%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   GI  +GKTT    L+ F +  K   V +  E            +     V++   
Sbjct: 3  LIIITGIPSSGKTTTAHKLRDFFEGEKGKKVMIVSEL--NEQTPQRNDIYKDSAVEKTVR 60

Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           A             ++ I   L +  I++ D
Sbjct: 61 SA------------FKSEILRILNKEDIIIAD 80


>gi|284045269|ref|YP_003395609.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283949490|gb|ADB52234.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 249

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 6   FISFEGIEGAGKTTHISLLK--RFLQRKNYDV-----HVTREPGGTPAAEAARHVLLSCG 58
           F++  G  G GKTT + LL      Q    +V      V +EP   P  +  R+VLL   
Sbjct: 42  FVALLGPSGCGKTTLLRLLAGLEHAQAGAIEVPGAHSIVFQEPRLLPWQKVWRNVLLGLP 101

Query: 59  VDEFGAEAEAI 69
                   EA+
Sbjct: 102 KGTRARALEAL 112


>gi|260914207|ref|ZP_05920680.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Pasteurella dagmatis ATCC
          43325]
 gi|260631840|gb|EEX50018.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Pasteurella dagmatis ATCC
          43325]
          Length = 370

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLLA 57


>gi|171910580|ref|ZP_02926050.1| hypothetical protein VspiD_05390 [Verrucomicrobium spinosum DSM
          4136]
          Length = 386

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 7/35 (20%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M  G         GAGKTT I  L R L  +   V
Sbjct: 19 MIGGFL-------GAGKTTAIGKLARHLTDQGLKV 46


>gi|166364319|ref|YP_001656592.1| twitching mobility protein [Microcystis aeruginosa NIES-843]
 gi|166086692|dbj|BAG01400.1| twitching mobility protein [Microcystis aeruginosa NIES-843]
          Length = 438

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           + G  I   G  G+GK+T ++ +  ++ +++    +T E       ++ R ++    
Sbjct: 208 HKG-LILITGPTGSGKSTTLAAMVDYINKEHAKHIITIEDPIEFVHQSRRSLIKQKE 263


>gi|126734496|ref|ZP_01750243.1| polyamine ABC transporter, ATP-binding protein [Roseobacter sp.
          CCS2]
 gi|126717362|gb|EBA14226.1| polyamine ABC transporter, ATP-binding protein [Roseobacter sp.
          CCS2]
          Length = 362

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G FI+  G  G+GKTT + +L 
Sbjct: 34 KEGEFITLLGPSGSGKTTVLMMLA 57


>gi|124026745|ref|YP_001015860.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus
           marinus str. NATL1A]
 gi|189036397|sp|A2C536|PANCY_PROM1 RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantothenate synthetase;
           Short=PS; AltName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; Includes:
           RecName: Full=Cytidylate kinase; Short=CK; AltName:
           Full=Cytidine monophosphate kinase; Short=CMP kinase
 gi|123961813|gb|ABM76596.1| putative bifunctional enzyme; pantothenate synthetase/cytidylate
           kinase [Prochlorococcus marinus str. NATL1A]
          Length = 516

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL 28
           M+    I+ +G  GAGK+T      + L
Sbjct: 282 MHRKPIIAIDGPAGAGKSTVTKAFAKKL 309


>gi|108758413|ref|YP_628884.1| thermosensitive gluconokinase [Myxococcus xanthus DK 1622]
 gi|108462293|gb|ABF87478.1| thermosensitive gluconokinase [Myxococcus xanthus DK 1622]
          Length = 162

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 62/210 (29%), Gaps = 56/210 (26%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + +   G+ GAGKTT    L   L              G    +A     L    +    
Sbjct: 1   MVVIIMGVSGAGKTTVGRTLAAEL--------------GWRFIDADD---LHPRSNVMKM 43

Query: 65  EAEAIVFAAARL---DHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDS 119
            A A +    R      + + +  AL +G+ ++      S    AY+   +      +  
Sbjct: 44  AAGAPLTDEDRAPWLRKLRDEVARALAQGEDVVM---AFSGLKQAYRTLLEELDPAHVRW 100

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                         + L  P ++  +R+  R      A L   E +              
Sbjct: 101 --------------VFLHAPHEVLARRMSQRQGHFMPASL--LESQ-------------- 130

Query: 180 IARNQ-PDRCHIVDSAHSFQSVATNILNIV 208
           +A  + P R   VD       +  +I + +
Sbjct: 131 MAAMELPSRALSVDVTPPPADIVKHIRDEL 160


>gi|86356351|ref|YP_468243.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli CFN 42]
 gi|86280453|gb|ABC89516.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli CFN 42]
          Length = 362

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|28373853|pdb|1N3B|A Chain A, Crystal Structure Of Dephosphocoenzyme A Kinase From
           Escherichia Coli
 gi|28373854|pdb|1N3B|B Chain B, Crystal Structure Of Dephosphocoenzyme A Kinase From
           Escherichia Coli
 gi|28373855|pdb|1N3B|C Chain C, Crystal Structure Of Dephosphocoenzyme A Kinase From
           Escherichia Coli
          Length = 216

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTXQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|34762886|ref|ZP_00143869.1| Guanylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC
          49256]
 gi|256846765|ref|ZP_05552221.1| guanylate kinase [Fusobacterium sp. 3_1_36A2]
 gi|27887450|gb|EAA24537.1| Guanylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC
          49256]
 gi|256717985|gb|EEU31542.1| guanylate kinase [Fusobacterium sp. 3_1_36A2]
          Length = 185

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|319902502|ref|YP_004162230.1| ABC transporter related protein [Bacteroides helcogenes P 36-108]
 gi|319417533|gb|ADV44644.1| ABC transporter related protein [Bacteroides helcogenes P 36-108]
          Length = 460

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|317495480|ref|ZP_07953848.1| signal recognition particle-docking protein FtsY [Gemella
           moribillum M424]
 gi|316914294|gb|EFV35772.1| signal recognition particle-docking protein FtsY [Gemella
           moribillum M424]
          Length = 348

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L+++   V +    G T  A A     L       GA+     
Sbjct: 146 GVNGVGKTTSIGKLAHNLKKEGKKVLIAA--GDTFRAGAIDQ--LDVWAKRSGADIVKSH 201

Query: 71  FAAARLDHVENVIRPALMEGKIL-LCD 96
             A     + + I+ A  +G  + LCD
Sbjct: 202 EGADSAAIIFDAIQSAKAKGYDVLLCD 228


>gi|312622104|ref|YP_004023717.1| ABC transporter-like protein [Caldicellulosiruptor kronotskyensis
          2002]
 gi|312202571|gb|ADQ45898.1| ABC transporter related protein [Caldicellulosiruptor
          kronotskyensis 2002]
          Length = 278

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F++  G+ G+GK+T   L+   L  +  DV V
Sbjct: 34 RGEFVAILGLNGSGKSTLAKLINGLLIPEKGDVIV 68


>gi|306835984|ref|ZP_07468976.1| dephospho-CoA kinase [Corynebacterium accolens ATCC 49726]
 gi|304568150|gb|EFM43723.1| dephospho-CoA kinase [Corynebacterium accolens ATCC 49726]
          Length = 200

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 69/220 (31%), Gaps = 39/220 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------VTREPGGTPAAEAARH----V 53
             I   G  G+GK+T   L  +    + + V           +PG    AE A      +
Sbjct: 2   KLIGLTGGIGSGKSTVAKLCAQ----RGWRVVDADCIARDIVKPGQPALAELAEKFGEDI 57

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           L   G  +    A          + + ++  P + E          ++   +   R+   
Sbjct: 58  LQEDGSLDRKELARRAFVDKEHTELLNSITHPRIQE----------ETQRQFAAAREEGV 107

Query: 114 HLFLDSLQEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              +  +  +    +  D    I++D+  +  ++R+     L E+        +      
Sbjct: 108 DFTVYDMPLLVDNGLDGDMDFVIVVDVDPEERVRRLVEFRGLDEADARKRINAQISDD-- 165

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                   +A       H++D+  + + +A     +  E+
Sbjct: 166 ------KRLAAAS----HVIDNNGTQEQLAERAAAVCDEI 195


>gi|297797631|ref|XP_002866700.1| hypothetical protein ARALYDRAFT_496843 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312535|gb|EFH42959.1| hypothetical protein ARALYDRAFT_496843 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 298

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 40/151 (26%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK++    L R L  +                      +L      
Sbjct: 111 QKGCVIWITGLSGSGKSSLACALSRALHNRGK-----------------LSYILDGDNVR 153

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G  ++    A  R +++     V +     G I +    L S Y     R         
Sbjct: 154 HGLNSDLSFEAEDRAENIRRVGEVAKLFADAGIICIA--SLISPY-----RR-------- 198

Query: 119 SLQEISVQEVMP--DCT-IILDLPVDIGLKR 146
             +  + + ++P  D   + +D+P+ +   R
Sbjct: 199 --ERAACRALLPEGDFIEVFMDVPLHVCEAR 227


>gi|315503028|ref|YP_004081915.1| amp-dependent synthetase and ligase [Micromonospora sp. L5]
 gi|315409647|gb|ADU07764.1| AMP-dependent synthetase and ligase [Micromonospora sp. L5]
          Length = 620

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 23/128 (17%)

Query: 48  EAARHVLLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105
           EA RH+L+        +  E  +   AA  L  V + I P L   ++    R+     A 
Sbjct: 68  EAGRHMLI-----MMSSRTEHWLVDLAAVHLGAVPSTIYPTLSAEQM----RY----LAR 114

Query: 106 QGERDSSQHLFLDSLQEI-SVQEVMPDC--TIILDLPVDIG-----LKRVQNRYSLRESA 157
                         L+    +   +PD    +++D P +       L RV+        A
Sbjct: 115 HSAAQVLVLEGPAELERWRPILADLPDLLRVVLVDEPAEPAGDAVPLSRVRTLGRAAREA 174

Query: 158 CLDYFERK 165
             D FER+
Sbjct: 175 DPDAFERR 182


>gi|284047845|ref|YP_003398184.1| signal recognition particle protein [Acidaminococcus fermentans DSM
           20731]
 gi|283952066|gb|ADB46869.1| signal recognition particle protein [Acidaminococcus fermentans DSM
           20731]
          Length = 448

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 20/137 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT +  L  +L++      +       PAA     V+   L   V   G +  
Sbjct: 108 GLQGAGKTTTVGKLANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKQLDMPVFSMGDQVS 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                         + R +L     LLCD    +       R       ++ L+++    
Sbjct: 168 P-----------VEIARESLKRANALLCD----TVLIDTAGRLHVDETLMNELKDMKT-A 211

Query: 128 VMPDCTIILDLPVDIGL 144
           V PD  I+L +    G 
Sbjct: 212 VNPD-EILLVVDAMTGQ 227


>gi|260495673|ref|ZP_05815796.1| guanylate kinase [Fusobacterium sp. 3_1_33]
 gi|260196738|gb|EEW94262.1| guanylate kinase [Fusobacterium sp. 3_1_33]
          Length = 185

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|239623624|ref|ZP_04666655.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47_FAA]
 gi|239521655|gb|EEQ61521.1| conserved hypothetical protein [Clostridiales bacterium
          1_7_47FAA]
          Length = 510

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          I FEG+  AGK   I+ L + L  + +DV+    P 
Sbjct: 52 IVFEGMGAAGKGVQINRLIQSLDPRGFDVYACDRPT 87


>gi|227552224|ref|ZP_03982273.1| deoxyguanosine kinase [Enterococcus faecium TX1330]
 gi|257883841|ref|ZP_05663494.1| deoxyguanosine kinase [Enterococcus faecium 1,231,501]
 gi|257886610|ref|ZP_05666263.1| deoxyguanosine kinase [Enterococcus faecium 1,141,733]
 gi|257892821|ref|ZP_05672474.1| deoxyguanosine kinase [Enterococcus faecium 1,231,408]
 gi|257895191|ref|ZP_05674844.1| deoxyguanosine kinase [Enterococcus faecium Com12]
 gi|257897812|ref|ZP_05677465.1| deoxyguanosine kinase [Enterococcus faecium Com15]
 gi|293377279|ref|ZP_06623484.1| deoxynucleoside kinase [Enterococcus faecium PC4.1]
 gi|293573164|ref|ZP_06684099.1| deoxyguanosIne kinase [Enterococcus faecium E980]
 gi|227178642|gb|EEI59614.1| deoxyguanosine kinase [Enterococcus faecium TX1330]
 gi|257819679|gb|EEV46827.1| deoxyguanosine kinase [Enterococcus faecium 1,231,501]
 gi|257822664|gb|EEV49596.1| deoxyguanosine kinase [Enterococcus faecium 1,141,733]
 gi|257829200|gb|EEV55807.1| deoxyguanosine kinase [Enterococcus faecium 1,231,408]
 gi|257831756|gb|EEV58177.1| deoxyguanosine kinase [Enterococcus faecium Com12]
 gi|257835724|gb|EEV60798.1| deoxyguanosine kinase [Enterococcus faecium Com15]
 gi|291606759|gb|EFF36146.1| deoxyguanosIne kinase [Enterococcus faecium E980]
 gi|292644140|gb|EFF62245.1| deoxynucleoside kinase [Enterococcus faecium PC4.1]
          Length = 233

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 42/228 (18%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK++   +L + +  K         P      +     L     +++    
Sbjct: 4   ILISGTIGAGKSSLTDMLAKEIDSK---------PFYENVEDNEVLPLFYSNPEQYAFLL 54

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLD------- 118
           +        L      ++ AL+    +L DR +   S  +    D  +   ++       
Sbjct: 55  QIFFLNKRFLA-----MKNALVNDDNVL-DRSIYEDSLLFHLNADLGRVTDIEVQQYDSL 108

Query: 119 ---SLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-----YFERKDVM 168
               L E+     +  PD  + + + +D  L+R++ R    E    D     Y+E     
Sbjct: 109 LDTMLNELDDVAPKKRPDLMVHIKVSLDTMLERIKKRGRDYEQLESDETLYTYYE----T 164

Query: 169 IHEKRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++ +  Q + D       +   D    V++    + V   I   + EL
Sbjct: 165 LNTRYNQWYEDFDVCPKIQVDGDTFDFVENPEDAKKVIRQIQEKLAEL 212


>gi|226362008|ref|YP_002779786.1| hypothetical protein ROP_25940 [Rhodococcus opacus B4]
 gi|226240493|dbj|BAH50841.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 1499

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           +  EG  G GKT  I+ L   L  +   V VT E
Sbjct: 390 VVVEGPPGTGKTHTIANLVSALLARGQRVLVTSE 423


>gi|254470377|ref|ZP_05083781.1| adenylate kinase [Pseudovibrio sp. JE062]
 gi|211960688|gb|EEA95884.1| adenylate kinase [Pseudovibrio sp. JE062]
          Length = 190

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 57/218 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L             T         +  R  +         AE E  +
Sbjct: 7   GPPGAGKGTQAGRLVA---AHGIVQLST--------GDMLRAAV--------AAETEVGL 47

Query: 71  FAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                       ++  L  G+++        + DR   +  A   +            Q 
Sbjct: 48  -----------KVKDVLTRGELVSDDLICSIISDRIDQADCA---KGFILDGFPRTIAQA 93

Query: 123 ISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            ++ E++       D  + L +   I L+R++ R         D     +    +KR  +
Sbjct: 94  DALGELLEKKNQRLDAVVQLKVDEGILLERIETRARESAEVRSD----DNAESLKKRLAV 149

Query: 177 FLD----IARNQPDR--CHIVDSAHSFQSVATNILNIV 208
           + +    + +   +R     VD   S   VA  I  I+
Sbjct: 150 YNEQTAPLIQYYGERNMLMTVDGMKSVDEVAAEIDTIL 187


>gi|254444977|ref|ZP_05058453.1| Polyphosphate kinase 2 family [Verrucomicrobiae bacterium DG1235]
 gi|198259285|gb|EDY83593.1| Polyphosphate kinase 2 family [Verrucomicrobiae bacterium DG1235]
          Length = 500

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 47/172 (27%), Gaps = 39/172 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G + AGK   I  L + +  + YDV     P     +       L     E     
Sbjct: 301 IVFCGWDAAGKGGCIKRLVQCIDPRGYDVTPIAAPSKIELSHH----YLWRFWKEMPPRG 356

Query: 67  EAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  VF   R  +   +   +       +            AYQ   +  QH     L   
Sbjct: 357 KIAVF--DRSWYGRVLVERVESLCANEEW---------QAAYQEINEMEQH-----LANF 400

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL------------RESACLDYFE 163
               +       L +  D  L+R + R               R     D +E
Sbjct: 401 GTAIIK----FWLHIDKDTQLERFKAREENPLKQWKITEEDWRNREKWDRYE 448


>gi|189465556|ref|ZP_03014341.1| hypothetical protein BACINT_01914 [Bacteroides intestinalis DSM
          17393]
 gi|189437830|gb|EDV06815.1| hypothetical protein BACINT_01914 [Bacteroides intestinalis DSM
          17393]
          Length = 480

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|171909787|ref|ZP_02925257.1| hypothetical protein VspiD_01405 [Verrucomicrobium spinosum DSM
           4136]
          Length = 219

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 12/78 (15%)

Query: 146 RVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIAR---------NQPDRCHI--VDS 193
           R +    LR+ A  D  F+  +  + +KR + + + ++             R  +  +D+
Sbjct: 131 RAELARRLRKRALKDNRFDDANDEVIQKRIRTYEEESKPILEYYSSGKYKGRSIVTDIDA 190

Query: 194 AHSFQSVATNILNIVWEL 211
                 V   IL+ + EL
Sbjct: 191 GQPPAKVVHQILSRIMEL 208


>gi|171680626|ref|XP_001905258.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939940|emb|CAP65166.1| unnamed protein product [Podospora anserina S mat+]
          Length = 721

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 16/89 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---------------L 55
           G  G GK+T + LL R    ++  + +  +       E+ R  +               L
Sbjct: 502 GPSGCGKSTLLRLLFRSYDAQSGRILIDDQDIKDVTLESLRKSIGVVPQDTPLFNDTVEL 561

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIR 84
           +       A AE  VFAAA+  H+ + I 
Sbjct: 562 NIRYGNMDAPAE-DVFAAAQRAHIHDKIE 589


>gi|111019858|ref|YP_702830.1| DNA helicase [Rhodococcus jostii RHA1]
 gi|110819388|gb|ABG94672.1| possible DNA helicase [Rhodococcus jostii RHA1]
          Length = 1496

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           +  EG  G GKT  I+ L   L  +   V VT E
Sbjct: 383 VVVEGPPGTGKTHTIANLVSALLARGQRVLVTSE 416


>gi|85860615|ref|YP_462817.1| iron(III) dicitrate transport ATP-binding protein [Syntrophus
          aciditrophicus SB]
 gi|85723706|gb|ABC78649.1| iron(III) dicitrate transport ATP-binding protein [Syntrophus
          aciditrophicus SB]
          Length = 288

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +  G  ++  G  G GK+T I ++   L+    D+  
Sbjct: 29 IKKGEIVTLLGPNGCGKSTLIKIMLGLLRPAGGDIFF 65


>gi|326422481|gb|EGD71879.1| Signal recognition particle receptor [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 378

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 15/127 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I+ L +    K     +    G T  A +   + +     +         
Sbjct: 189 GVNGAGKTTTIAKLCKLFLSKGLKPVIAA--GDTFRAASIEQLEIHAKKLKVP--IIKHT 244

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
           + +       + I+ A      +++ D            R       ++ L++   +   
Sbjct: 245 YGSDPAAVAFDAIKHANSAKEDVVVID---------TAGRSDINKNLIEELKK-VKRVSK 294

Query: 130 PDCTIIL 136
           PD TI +
Sbjct: 295 PDMTIFI 301


>gi|297170483|gb|ADI21513.1| dethiobiotin synthetase [uncultured verrucomicrobium
          HF0070_15G23]
          Length = 235

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 6  FISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
          F++  G + G+GKT   SLL + L+++ ++    +     P  +   ++L S   ++   
Sbjct: 10 FVT--GTDTGSGKTVLTSLLLQHLRKRGFNALAMKPVCTGPRDDV--NLLQSLQGNKLSD 65

Query: 65 E 65
          E
Sbjct: 66 E 66


>gi|315222110|ref|ZP_07864020.1| deoxynucleoside kinase [Streptococcus anginosus F0211]
 gi|315188860|gb|EFU22565.1| deoxynucleoside kinase [Streptococcus anginosus F0211]
          Length = 248

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 42/235 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I   G+ G GKTT+   L   L             G  P  E      +L    ++    
Sbjct: 38  IILAGMIGVGKTTYTYRLAEEL-------------GTQPFFEPVEENPILDKYYEDPDKY 84

Query: 66  AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS--------SQH 114
             A+ ++   +      +I+ A  +   +L DR  + D+ + Y                 
Sbjct: 85  GFALQIYFLNKR---FKMIKAAYHDDNNIL-DRSIYEDALFTYINTLKGSISEQEYDIYL 140

Query: 115 LFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
             LD++ E         PD  I LD   D  +  ++ R    E       E      ++ 
Sbjct: 141 ELLDNMMEEIEGLPKKAPDLLIYLDGSFDHIMNNIKKRGRNYEQPNE---ENGLADYYQL 197

Query: 173 RRQIFLDIARNQ----PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
             + + +   +       R     +         N  N V++ +Q+++  +  +K
Sbjct: 198 LYKHYQNWYEDYNYSPKMRI----ATDDLDIANPNDWNHVYQQIQEKMRTIGLEK 248


>gi|307596391|ref|YP_003902708.1| hypothetical protein Vdis_2289 [Vulcanisaeta distributa DSM 14429]
 gi|307551592|gb|ADN51657.1| protein of unknown function ATP binding protein [Vulcanisaeta
           distributa DSM 14429]
          Length = 529

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 28/91 (30%), Gaps = 20/91 (21%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-------------AEAA 50
           G+ I+  G  GAGKTT    L  +       V     P                  +E  
Sbjct: 264 GILIA--GPPGAGKTTFAQALAEYYMSLGKVVKTVESPRDMILPNEITQISKTYASSEEI 321

Query: 51  RHVLLSCGV-----DEFGAEAEAIVFAAARL 76
             +LL         DE    A+  ++   RL
Sbjct: 322 HDLLLLSRPDFTIFDEMRDTADFQLYIDLRL 352


>gi|295132416|ref|YP_003583092.1| adenylylsulfate kinase [Zunongwangia profunda SM-A87]
 gi|294980431|gb|ADF50896.1| adenylylsulfate kinase [Zunongwangia profunda SM-A87]
          Length = 196

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +LL++ L    +  +                 +L       G   + 
Sbjct: 29  FSGLSGSGKSTLANLLEKELFTAGFHTY-----------------VLDGDNIRLGLNKDL 71

Query: 69  IVFAAARLDHVENVI---RPALMEGKILLC 95
               A+R +++  +    +  L  G I++ 
Sbjct: 72  GFDQASRNENIRRIAEVCKLFLDSGLIVIA 101


>gi|294794153|ref|ZP_06759290.1| dethiobiotin synthetase [Veillonella sp. 3_1_44]
 gi|294455723|gb|EFG24095.1| dethiobiotin synthetase [Veillonella sp. 3_1_44]
          Length = 599

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQR 30
          +  G   +  G +GAGKTT I L+   L  
Sbjct: 34 IRKGCLTALVGPDGAGKTTLIRLIAGLLDA 63


>gi|294341239|emb|CAZ89640.1| putative Polyphosphate kinase [Thiomonas sp. 3As]
          Length = 397

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I  +   L  +   V    +P      +                  
Sbjct: 172 ILFEGRDAAGKGGTIKRVMEHLNPRGARVVALEKPSEVERGQW----------------- 214

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 215 ----YFQRYVQHLPT-------AGEIVLFDRSWY 237


>gi|289435038|ref|YP_003464910.1| deoxynucleoside kinase family protein [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289171282|emb|CBH27824.1| deoxynucleoside kinase family protein [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 214

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 82/233 (35%), Gaps = 52/233 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-VLLSCGVDEFGAE 65
           I   G+ GAGK+++  L+              RE G  P  E+ +   +L    D    +
Sbjct: 9   IVLAGMIGAGKSSYTELIA-------------RELGTKPFYESIKDNRILEMFYD--DPK 53

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-----SSYAYQGERDSSQHLF--LD 118
             A       L+     I+ AL +   +L DR +      +   Y+    S   +   LD
Sbjct: 54  RWAFALQIYFLNTRFRSIKAALTDQNNVL-DRSIYEDALFTQINYEEGNISEPEMDTYLD 112

Query: 119 SLQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-----ACLDYFERKDVM 168
            L  +      + +  PD  I L   +D  L+R+  R    E        LDY++     
Sbjct: 113 LLDNMMEELEFMPKKAPDLLIYLRGGLDTVLQRISLRGRPYEQIQDNPGLLDYYKH---- 168

Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV-------ATNILNIVWELVQK 214
           +H +    F   A        +++       V       A  ++ ++ E +++
Sbjct: 169 LHSRYDSWF---ASYDKSDTLVIN----IDEVDINKPTDAELVMKLIKEKLKR 214


>gi|326318366|ref|YP_004236038.1| glycerol-3-phosphate-transporting ATPase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375202|gb|ADX47471.1| Glycerol-3-phosphate-transporting ATPase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 338

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC 57
           G FI   G  G GK+T + ++    +           V    EP     A   ++  L  
Sbjct: 33  GEFIVIVGPSGCGKSTLLRMVAGLEEISGGEIAIGNRVVNDLEPAQRDIAMVFQNYALYP 92

Query: 58  GVDEFGAEAEAI 69
            +  F   A  +
Sbjct: 93  HMTNFENMAYGL 104


>gi|237740920|ref|ZP_04571401.1| guanylate kinase [Fusobacterium sp. 4_1_13]
 gi|229430964|gb|EEO41176.1| guanylate kinase [Fusobacterium sp. 4_1_13]
          Length = 185

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M+ G      G  GAGK+T   L++  L
Sbjct: 1  MSLGALYVVSGPSGAGKSTVCKLVRERL 28


>gi|182418314|ref|ZP_02949609.1| multiple sugar-binding transport ATP-binding protein MsmK
           [Clostridium butyricum 5521]
 gi|237666818|ref|ZP_04526803.1| multiple sugar-binding transport ATP-binding protein MsmK
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377696|gb|EDT75240.1| multiple sugar-binding transport ATP-binding protein MsmK
           [Clostridium butyricum 5521]
 gi|237658017|gb|EEP55572.1| multiple sugar-binding transport ATP-binding protein MsmK
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 369

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 6   FISFEGIEGAGKTTHISLLK--RFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI F G  G GK+T + ++     + +        +    EP     A   ++  L   +
Sbjct: 32  FIVFVGPSGCGKSTTLRMIAGLEEISKGELYIGGKLVNDVEPKERDIAMVFQNYALYPHM 91

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALME 89
             +   A A+    A  + +E  ++ A  +
Sbjct: 92  TVYDNMAFALKLRKAPKEEIEKKVKDAAKK 121


>gi|167760503|ref|ZP_02432630.1| hypothetical protein CLOSCI_02877 [Clostridium scindens ATCC
          35704]
 gi|167661869|gb|EDS05999.1| hypothetical protein CLOSCI_02877 [Clostridium scindens ATCC
          35704]
          Length = 274

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 11/61 (18%)

Query: 14 GAG-KTTHISLLKRFLQRKNYDVHVT----------REPGGTPAAEAARHVLLSCGVDEF 62
          GAG KTT I+ L +  +++   V V+                P+ +  R +L   G    
Sbjct: 35 GAGGKTTVIARLMKEHEKRGIPVVVSTTTHIQQIKASYFLDKPSGQRMRQILKDKGKVWM 94

Query: 63 G 63
          G
Sbjct: 95 G 95


>gi|152993333|ref|YP_001359054.1| cell division ATP-binding protein FtsE [Sulfurovum sp. NBC37-1]
 gi|151425194|dbj|BAF72697.1| cell division ATP-binding protein FtsE [Sulfurovum sp. NBC37-1]
          Length = 224

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +  G F+   G  G+GK+T +  L   L+
Sbjct: 29 IKKGEFVFITGPSGSGKSTLLKALYGALK 57


>gi|119500114|ref|XP_001266814.1| DNA replication helicase Dna2, putative [Neosartorya fischeri NRRL
            181]
 gi|119414979|gb|EAW24917.1| DNA replication helicase Dna2, putative [Neosartorya fischeri NRRL
            181]
          Length = 1607

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 6/89 (6%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAAR----HVLLSCGVDEFGA 64
            G+ G GKTT I+ + R L  +   V +T              R     +L      +   
Sbjct: 1109 GMPGTGKTTTIAHIIRALVAQGKSVLLTSYTHTAVDNILLKIRDDNFRILRIGATAKVHP 1168

Query: 65   EAEAIVFAAARLDHVENVIRPALMEGKIL 93
            E +  V  AA        ++ +  E +++
Sbjct: 1169 EVQQFVDLAAVPKSTVEELKASYEESQVV 1197


>gi|108710748|gb|ABF98543.1| expressed protein [Oryza sativa Japonica Group]
 gi|215769078|dbj|BAH01307.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218193640|gb|EEC76067.1| hypothetical protein OsI_13279 [Oryza sativa Indica Group]
 gi|222625678|gb|EEE59810.1| hypothetical protein OsJ_12343 [Oryza sativa Japonica Group]
          Length = 266

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
               +     ++H+E+ +   L E
Sbjct: 69 GPNGGLIYC--MEHLEDNLDDWLDE 91


>gi|407479|emb|CAA53054.1| TAP2 [Rattus norvegicus]
          Length = 703

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           ++ G   +  G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 493 LHPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 533


>gi|89900700|ref|YP_523171.1| molybdopterin-guanine dinucleotide biosynthesis protein B
           [Rhodoferax ferrireducens T118]
 gi|89345437|gb|ABD69640.1| molybdopterin-guanine dinucleotide biosynthesis protein B
           [Rhodoferax ferrireducens T118]
          Length = 177

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 45/153 (29%), Gaps = 25/153 (16%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEF------GAEA 66
           G+GKTT +  L   L+R+   V V +          A +          F          
Sbjct: 11  GSGKTTLVERLIPALRRRGLRVSVVKHAHHHFDIDHAGKDTYRHREAGAFEVVVASSKRL 70

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSY---------AYQGERDSSQHLF 116
             +           + +   L EG   +L + F DS           A Q  R       
Sbjct: 71  ALMREFEQAAQLTVHQLIAELYEGVDWVLVEGFKDSDLLKVEVWRAQARQPARYMDDDFI 130

Query: 117 LDSLQEISVQEV--MPDCTI--ILDLPVDIGLK 145
           +     I+      +P  T+  +LDL     L 
Sbjct: 131 VA----IATDSPDQLPHATLRPVLDLNDAEALA 159


>gi|33860726|ref|NP_892287.1| adenylylsulfate kinase [Prochlorococcus marinus subsp. pastoris
          str. CCMP1986]
 gi|33633668|emb|CAE18625.1| Adenylylsulfate kinase [Prochlorococcus marinus subsp. pastoris
          str. CCMP1986]
          Length = 208

 Score = 36.2 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          + G+ I F G+ G+GK+T  + +   L    +  +V
Sbjct: 31 HKGMVIWFTGLSGSGKSTLANAVNEVLHLDGFSTYV 66


>gi|320167559|gb|EFW44458.1| ATP-binding cassette transporter [Capsaspora owczarzaki ATCC 30864]
          Length = 1480

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRF 27
             G+ ++  G  GAGKTT + +L   
Sbjct: 896 KPGMLVALMGPSGAGKTTLLDVLADR 921


>gi|306829950|ref|ZP_07463137.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Streptococcus mitis ATCC 6249]
 gi|304427961|gb|EFM31054.1| ABC superfamily ATP binding cassette transporter ABC protein
           [Streptococcus mitis ATCC 6249]
          Length = 240

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 12/89 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL----- 54
           +++G  +   G  G+GKTT I L+   LQ  K   +   ++P  +PA +A    L     
Sbjct: 35  ISAGKIVGLLGPNGSGKTTLIKLINGLLQPDKGRVLINGQDP--SPATKAIVSYLPDTTY 92

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDHV 79
           L+  +    A      F       R  H+
Sbjct: 93  LNEEMKVKDALTYFKTFYQDFNLERAQHL 121


>gi|312115000|ref|YP_004012596.1| LAO/AO transporter ATPase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220129|gb|ADP71497.1| LAO/AO transport system ATPase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 336

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
           G+ GAGK+T I  L   L RK + V  +  +P  T +  A 
Sbjct: 68  GVPGAGKSTMIDALGTLLVRKGHRVAVLAVDPSSTRSGGAI 108


>gi|229258564|gb|ACQ45587.1| cell division protein FtsY [Vesicomya sp. endosymbiont]
          Length = 194

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 17/93 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-------G 63
           G+ GAGKTT I  L +  Q +   V +    G T  A A   + +    ++        G
Sbjct: 45  GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAVEQLKVWGERNQIPVIAQTTG 102

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           A+A +++F A +    +N+         IL+ D
Sbjct: 103 ADAASVIFDAYQSAQAKNI--------DILIAD 127


>gi|229096476|ref|ZP_04227447.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus Rock3-29]
 gi|229102567|ref|ZP_04233271.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus Rock3-28]
 gi|229115449|ref|ZP_04244855.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus Rock1-3]
 gi|228667862|gb|EEL23298.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus Rock1-3]
 gi|228680794|gb|EEL34967.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus Rock3-28]
 gi|228686682|gb|EEL40589.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus Rock3-29]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGKEITKLSISDRTR 78


>gi|258511672|ref|YP_003185106.1| cytidylate kinase [Alicyclobacillus acidocaldarius subsp.
          acidocaldarius DSM 446]
 gi|257478398|gb|ACV58717.1| cytidylate kinase [Alicyclobacillus acidocaldarius subsp.
          acidocaldarius DSM 446]
          Length = 234

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ 29
          I+ +G  GAGK+T    +   L 
Sbjct: 15 IAIDGPAGAGKSTVAKRVAERLN 37


>gi|194431769|ref|ZP_03064060.1| adenylylsulfate kinase [Shigella dysenteriae 1012]
 gi|194420125|gb|EDX36203.1| adenylylsulfate kinase [Shigella dysenteriae 1012]
 gi|320180816|gb|EFW55739.1| Adenylylsulfate kinase [Shigella boydii ATCC 9905]
 gi|332087486|gb|EGI92614.1| adenylylsulfate kinase [Shigella boydii 5216-82]
 gi|332087626|gb|EGI92753.1| adenylylsulfate kinase [Shigella dysenteriae 155-74]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|189463175|ref|ZP_03011960.1| hypothetical protein BACCOP_03886 [Bacteroides coprocola DSM
          17136]
 gi|189430154|gb|EDU99138.1| hypothetical protein BACCOP_03886 [Bacteroides coprocola DSM
          17136]
          Length = 462

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++  G  G GKTT + L+ 
Sbjct: 31 IRKGEFVTILGPSGCGKTTLLRLIA 55


>gi|170025649|ref|YP_001722154.1| adenylylsulfate kinase [Yersinia pseudotuberculosis YPIII]
 gi|186894130|ref|YP_001871242.1| adenylylsulfate kinase [Yersinia pseudotuberculosis PB1/+]
 gi|169752183|gb|ACA69701.1| Adenylyl-sulfate kinase [Yersinia pseudotuberculosis YPIII]
 gi|186697156|gb|ACC87785.1| adenylylsulfate kinase [Yersinia pseudotuberculosis PB1/+]
          Length = 234

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 66  FTGLSGSGKSTLAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 108

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 109 GFSDADRRENIRRVGEVAKLMVDAGLVVLT 138


>gi|146321884|ref|YP_001201595.1| ABC-type multidrug transport system, ATPase and permease component
           [Streptococcus suis 98HAH33]
 gi|253752684|ref|YP_003025825.1| ABC transporter ATP-binding membrane protein [Streptococcus suis
           SC84]
 gi|253754510|ref|YP_003027651.1| ABC transporter ATP-binding membrane protein [Streptococcus suis
           P1/7]
 gi|253756443|ref|YP_003029583.1| ABC transporter ATP-binding membrane protein [Streptococcus suis
           BM407]
 gi|145692690|gb|ABP93195.1| ABC-type multidrug transport system, ATPase and permease component
           [Streptococcus suis 98HAH33]
 gi|251816973|emb|CAZ52622.1| ABC transporter ATP-binding membrane protein [Streptococcus suis
           SC84]
 gi|251818907|emb|CAZ56750.1| ABC transporter ATP-binding membrane protein [Streptococcus suis
           BM407]
 gi|251820756|emb|CAR47518.1| ABC transporter ATP-binding membrane protein [Streptococcus suis
           P1/7]
 gi|292559303|gb|ADE32304.1| ABC transporter, transmembrane region [Streptococcus suis GZ1]
          Length = 594

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 31/111 (27%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  ++  G  G+GKTT ++L+ RF       V               R   L    ++ 
Sbjct: 380 KGKMVAVVGPTGSGKTTIMNLINRFYDVNGGSVAFD--------GRDIREYDLDSLRNKV 431

Query: 63  G-AEAEAIVFA---------------------AARLDHVENVIRPALMEGK 91
           G    E+++F+                     AAR  H+ + I  +L EG 
Sbjct: 432 GIVLQESVLFSGTIADNIRFGDESISQEMVETAARATHIHDFIM-SLPEGY 481


>gi|119873001|ref|YP_931008.1| adenylyl-sulfate kinase [Pyrobaculum islandicum DSM 4184]
 gi|119674409|gb|ABL88665.1| adenylylsulfate kinase [Pyrobaculum islandicum DSM 4184]
          Length = 196

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 47/220 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GKTT   L  + L+ +                      +L           + 
Sbjct: 12  FTGLPASGKTTIAKLTAQILRGQGIKAE-----------------VLDGDQLRQTINTDL 54

Query: 69  IVFAAARLDHVEN--VIRPALMEGKILLCDRFLDSS-YAYQGERDSSQHLFLDSLQEISV 125
                 R+ H+     I   L    I++   F+     A Q  R   +      L  +  
Sbjct: 55  GYTRQDRIRHLTRAAWIARLLARNGIVVLAAFITPYEEARQTVRRIVEEE--APLLLVYT 112

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLDIARNQ 184
           +  + D   ++      GL     R  ++    + D FE                     
Sbjct: 113 KAPL-DL--LIKRDPK-GLYAKALRGEIKNFTGIDDPFEE-----------------PQN 151

Query: 185 PDRCHIVD-SAHSFQSVATNILNIVWELVQKRVSPLSSKK 223
           PD   ++D +A   +  A  + +++   +  +  P    +
Sbjct: 152 PD--IVLDTAAQPPEKNAQELAHLILTTLSSQGQPPPKPR 189


>gi|120404101|ref|YP_953930.1| daunorubicin resistance ABC transporter ATPase subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956919|gb|ABM13924.1| daunorubicin resistance ABC transporter ATPase subunit
           [Mycobacterium vanbaalenii PYR-1]
          Length = 334

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 40/228 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA----EA 66
           G  GAGKTT +++L   ++  +    +      T  A   R ++L+              
Sbjct: 40  GPNGAGKTTTVNILSTLIKPDSGRALIAGHDVVTDPAGVRRALMLTGQHAALDDLLTGRE 99

Query: 67  EAIVFAAARLDHVENVI-----RPALMEGKIL-LCDR--FLDSSYAYQGERDSSQHLFLD 118
             ++F   RL  ++  +     +  L +  ++   DR     S     G +         
Sbjct: 100 NLLMF--GRLQGLKKKVAKQRAQELLEQFDLVQAADRPVGTYSG----GMKRRID----- 148

Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
               I+   V  P+  + LD     GL   ++R ++ E    D+ E   +      +  +
Sbjct: 149 ----IACGLVVRPE-VVFLD-EPTTGLD-PRSRQAIWEL-VTDFKEA-GIATLLTTQ--Y 197

Query: 178 LDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWELVQKRVSPLS 220
           L+ A    DR  ++D     +  +   +         E+V + ++ + 
Sbjct: 198 LEEADLLSDRIIVIDKGTVIAEGTADELKERTGGTYCEIVPRNLADIP 245


>gi|89093834|ref|ZP_01166780.1| guanylate kinase [Oceanospirillum sp. MED92]
 gi|89081964|gb|EAR61190.1| guanylate kinase [Oceanospirillum sp. MED92]
          Length = 204

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 30/163 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M  G         GAGKT+ +  + +  Q     V H TRE           + +     
Sbjct: 1   MAKGTLYVVSAPSGAGKTSLVKAMLKQDQSIVVSVSHTTREMRPGEVDGVDYNFVSMDQF 60

Query: 60  DEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E   +A+ + FA     +    +  +   L +GK ++ +        +QG +       
Sbjct: 61  NEMIGQADFLEFAEVFTNKYGTSQRWVEDQLEQGKDVILE------IDWQGAQQ------ 108

Query: 117 LDSLQEISVQEVMPDC--TIILDLPV--DIGLKRVQNRYSLRE 155
                   V+ +MPDC    IL  P   +   +R+ NR    E
Sbjct: 109 --------VRRLMPDCLSVFIL--PPSREALEERLTNRGQDSE 141


>gi|325473358|gb|EGC76553.1| ABC transporter [Treponema denticola F0402]
          Length = 478

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          N G F+   G+ G GKTT I +L
Sbjct: 31 NQGEFVVITGLSGCGKTTLIRVL 53


>gi|325261386|ref|ZP_08128124.1| excinuclease ABC, A subunit [Clostridium sp. D5]
 gi|324032840|gb|EGB94117.1| excinuclease ABC, A subunit [Clostridium sp. D5]
          Length = 837

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 3  SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----HVLLSC 57
              + F G+ G+GK+T  I +L +  QR+  +   T E    P  E+ R     +L+S 
Sbjct: 23 KNKLVVFTGLSGSGKSTLLIDVLFQECQRQYLEAI-TLEGIHKPEVESVRGASPAILISQ 81

Query: 58 GVDEFGAEA 66
                  +
Sbjct: 82 MDGNRNPRS 90


>gi|323705118|ref|ZP_08116694.1| excinuclease ABC, A subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535544|gb|EGB25319.1| excinuclease ABC, A subunit [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 926

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ I   G+ G+GK+T I  +L + L +K Y       PG   A E   ++
Sbjct: 618 GILICITGVSGSGKSTLINEILYKALAQKLYKAKDL--PGKYAALEGIENI 666


>gi|323141636|ref|ZP_08076518.1| LAO/AO transport system ATPase [Phascolarctobacterium sp. YIT
           12067]
 gi|322413901|gb|EFY04738.1| LAO/AO transport system ATPase [Phascolarctobacterium sp. YIT
           12067]
          Length = 312

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGV 59
           I   G  GAGK+T    L +  +++   V  V  +P     GG    +  R + L+   
Sbjct: 46  IGITGPPGAGKSTLTDKLAKEYRKRGKTVGIVAIDPTSPYSGGAILGDRIRMMDLTADE 104


>gi|295695142|ref|YP_003588380.1| LAO/AO transport system ATPase [Bacillus tusciae DSM 2912]
 gi|295410744|gb|ADG05236.1| LAO/AO transport system ATPase [Bacillus tusciae DSM 2912]
          Length = 312

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSC 57
           G  GAGK+T  + L +       +V  V  +P     GG    +  R + LS 
Sbjct: 51  GPPGAGKSTLTAKLSKRWAEAGREVGIVCVDPTSPFSGGALLGDRIRMLELSS 103


>gi|295394815|ref|ZP_06805030.1| PPK2 family polyphosphate:nucleotide phosphotransferase
           [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972411|gb|EFG48271.1| PPK2 family polyphosphate:nucleotide phosphotransferase
           [Brevibacterium mcbrellneri ATCC 49030]
          Length = 350

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P                         
Sbjct: 124 IIFEGRDAAGKGGAIKRFTEHLNPRGARVVALEKPT---------------------ERE 162

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
           +   +    + H+          G+I++ DR   
Sbjct: 163 QTQWYFQRYVQHLP-------AAGEIVMFDRSWY 189


>gi|291543213|emb|CBL16322.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase
          component [Ruminococcus sp. 18P13]
          Length = 269

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +  G F+S  G  G GKTT + ++   LQ
Sbjct: 46 IQKGEFVSLLGPSGCGKTTLLRIIADLLQ 74


>gi|297736819|emb|CBI26020.3| unnamed protein product [Vitis vinifera]
          Length = 2226

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 15/94 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSC 57
           ++SG  ++  G  G+GK+T ISLL+RF            +P            + + L  
Sbjct: 806 IHSGKTVALVGESGSGKSTAISLLQRF-----------YDPDSGHITLDGVEIQKLQLKW 854

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK 91
              + G   EA + AAA L +    I   L +G 
Sbjct: 855 FRQQMGNATEAEISAAAELANAHKFISG-LQQGY 887


>gi|224540089|ref|ZP_03680628.1| hypothetical protein BACCELL_05002 [Bacteroides cellulosilyticus
          DSM 14838]
 gi|224518282|gb|EEF87387.1| hypothetical protein BACCELL_05002 [Bacteroides cellulosilyticus
          DSM 14838]
          Length = 480

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|281419166|ref|ZP_06250183.1| ATPase-like, ParA/MinD [Clostridium thermocellum JW20]
 gi|281407315|gb|EFB37576.1| ATPase-like, ParA/MinD [Clostridium thermocellum JW20]
          Length = 277

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +L+   L +K Y V
Sbjct: 41 GVGKSTVSALIAEELNKKGYKV 62


>gi|167758276|ref|ZP_02430403.1| hypothetical protein CLOSCI_00614 [Clostridium scindens ATCC
          35704]
 gi|167664173|gb|EDS08303.1| hypothetical protein CLOSCI_00614 [Clostridium scindens ATCC
          35704]
          Length = 645

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          G  GAGK+T + ++   L     DV +T+
Sbjct: 42 GPNGAGKSTLLKIIVGELPSDGGDVILTK 70


>gi|164662587|ref|XP_001732415.1| hypothetical protein MGL_0190 [Malassezia globosa CBS 7966]
 gi|159106318|gb|EDP45201.1| hypothetical protein MGL_0190 [Malassezia globosa CBS 7966]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ I F G+  +GK+T    L++ L  +       R  G        + +  S    E
Sbjct: 23  QKGMTIWFTGLSASGKSTIAVALEQHLLHQKKSAF--RLDGDNIRFGLNKDLGFSPKDRE 80

Query: 62  FGAE---AEAIVFAAARLDHVENVIRPALME 89
                    A++FA++    + + I P   +
Sbjct: 81  ENIRRISEVALLFASSTSIAITSFISPYKAD 111


>gi|153824577|ref|ZP_01977244.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae MZO-2]
 gi|149741795|gb|EDM55824.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae MZO-2]
          Length = 279

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F    G  G GK+T +  L R L+ +   V +
Sbjct: 46 GKFSVIVGPNGCGKSTLLKSLCRLLKPQAGQVLL 79


>gi|153005133|ref|YP_001379458.1| adenylylsulfate kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152028706|gb|ABS26474.1| adenylylsulfate kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 233

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 14/94 (14%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G  I   G+  AGK+T  + L + L      V +  E G          VLL      
Sbjct: 5  TTGFVIWLTGMNRAGKSTLAAHLAKRLAAAGRTVELLDEDGDA-------AVLLEGLGAG 57

Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
              A A+    ARL  V   +      G I +C
Sbjct: 58 KDDHARAV----ARLGLVAKAV---ARAGGIAVC 84


>gi|108562580|ref|YP_626896.1| shikimate kinase [Helicobacter pylori HPAG1]
 gi|123073846|sp|Q1CV00|AROK_HELPH RecName: Full=Shikimate kinase; Short=SK
 gi|107836353|gb|ABF84222.1| shikimic acid kinase I [Helicobacter pylori HPAG1]
          Length = 162

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  ++L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIIMHENLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   RE   L     +   + EKR+ ++   A        I+D+
Sbjct: 95  FYLKMDFETLIKRLNQKE--REKRPLLNNLTQAKELFEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|88603475|ref|YP_503653.1| adenylate kinase [Methanospirillum hungatei JF-1]
 gi|88188937|gb|ABD41934.1| Adenylate kinase [Methanospirillum hungatei JF-1]
          Length = 190

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 16/144 (11%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  +   G+ G GKT+ I+   R L+ +                    +++        
Sbjct: 2   TGKKVIITGVPGVGKTSVITESIRRLEEEGVPYQSINFGTFMFEVAQKENIVKDRDEMRK 61

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
             +      +  RL  + +     + +G I++ D    +S         +   FL  L E
Sbjct: 62  LDK-----NSQKRLQQLASQAIARI-DGNIII-D--THASV-------KTPVGFLAGLPE 105

Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146
             ++E+ PD  I+++   D  LKR
Sbjct: 106 WVLKELKPDLIILVETDSDQILKR 129


>gi|52549946|gb|AAU83795.1| CODH nickel-insertion accessory protein [uncultured archaeon
           GZfos34A6]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 13/114 (11%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK++  +LL   L+++ Y V V                 L   +     E  A+ F  
Sbjct: 10  GCGKSSVTALLAIELEKRGYKVIVVDNDESNFG--------LHIQLGMELPEDFALHFGG 61

Query: 74  ARLDHVENVIRPALMEGK--ILLCD--RFLDSSYAYQGERDSSQHLFLDSLQEI 123
            R+   E +++    EG+   +  D  R  D   AY  ++     + +  ++E 
Sbjct: 62  KRM-VAEKLLKSMKGEGERFSVFNDGIRASDIPDAYMSKKGGLNLIAIGKIREF 114


>gi|407481|emb|CAA53055.1| TAP2 [Rattus norvegicus]
          Length = 703

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           ++ G   +  G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 493 LHPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 533


>gi|82703862|ref|YP_413428.1| ABC transporter related [Nitrosospira multiformis ATCC 25196]
 gi|82411927|gb|ABB76036.1| ABC transporter related protein [Nitrosospira multiformis ATCC
          25196]
          Length = 270

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          M  G  I+  G  G+GKTT + L+
Sbjct: 29 MGRGKVIAIMGGSGSGKTTLLRLI 52


>gi|42526412|ref|NP_971510.1| ABC transporter, ATP-binding protein [Treponema denticola ATCC
          35405]
 gi|41816605|gb|AAS11391.1| ABC transporter, ATP-binding protein [Treponema denticola ATCC
          35405]
          Length = 474

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          N G F+   G+ G GKTT I +L
Sbjct: 27 NQGEFVVITGLSGCGKTTLIRVL 49


>gi|158262055|ref|NP_114445.2| antigen peptide transporter 2 [Rattus norvegicus]
 gi|46237563|emb|CAE83943.1| transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) [Rattus
           norvegicus]
 gi|60688319|gb|AAH91140.1| Tap2 protein [Rattus norvegicus]
 gi|149043354|gb|EDL96805.1| transporter 2, ATP-binding cassette, sub-family B (MDR/TAP),
           isoform CRA_a [Rattus norvegicus]
          Length = 703

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           ++ G   +  G  G+GK+T  +LL+   Q     V +  EP
Sbjct: 493 LHPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 533


>gi|238792140|ref|ZP_04635775.1| RTX toxin secretion ATP-binding protein [Yersinia intermedia ATCC
           29909]
 gi|238728377|gb|EEQ19896.1| RTX toxin secretion ATP-binding protein [Yersinia intermedia ATCC
           29909]
          Length = 706

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKR-FLQRKNY 33
            G FI   G  G GK+T   LL+R +L +   
Sbjct: 494 GGEFIGISGPSGCGKSTLTKLLQRLYLPQHGQ 525


>gi|89895003|ref|YP_518490.1| hypothetical protein DSY2257 [Desulfitobacterium hafniense Y51]
 gi|219669406|ref|YP_002459841.1| cytidylate kinase [Desulfitobacterium hafniense DCB-2]
 gi|122482573|sp|Q24V96|KCY_DESHY RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|254807044|sp|B8G2Q5|KCY_DESHD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|89334451|dbj|BAE84046.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219539666|gb|ACL21405.1| cytidylate kinase [Desulfitobacterium hafniense DCB-2]
          Length = 232

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 1/77 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          M   L I+ +G  GAGK+T    + R L     D           A      +     + 
Sbjct: 1  MKKNLQIAIDGPAGAGKSTIAKAIARQLGFFYVDTGAMYRAIAYKALRLNIALTQEEEIA 60

Query: 61 EFGAEAEAIV-FAAARL 76
              + E  +  +AAR 
Sbjct: 61 GMARQTEITLEHSAARR 77


>gi|121612544|ref|YP_001001070.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni
          81-176]
 gi|167005971|ref|ZP_02271729.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni
          81-176]
 gi|56797593|emb|CAI38867.1| putative adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni 81-176]
 gi|87249752|gb|EAQ72711.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni
          81-176]
          Length = 170

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 8/70 (11%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          M +  +I    G+ G+GKTT    L   L+ K  ++            +  R +L     
Sbjct: 1  MKNNPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAY 53

Query: 60 DEFGAEAEAI 69
          D+ G    A+
Sbjct: 54 DKQGRIDMAL 63


>gi|332181455|gb|AEE17143.1| Cytidylate kinase [Treponema brennaborense DSM 12168]
          Length = 210

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 78/227 (34%), Gaps = 40/227 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAARHVLL 55
           + ++ +G  G+GK+T   L+   L           +   + + R   GT  ++  R + L
Sbjct: 1   MVVAIDGPAGSGKSTIARLIADKLGITFLNSGSFYRGITLSLLR--AGTDLSDNERILAL 58

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQH 114
           +  +D     +  ++      D + +    A       ++  R + +    Q  R  S  
Sbjct: 59  ARSLDIDYVRSRLVINGEDVEDLLHSDAVDAHAAQISAIVALRHIVNDKIRQITRSLSVV 118

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN-----------RYSLRESACLDYFE 163
                +  +   +   D    LD  +D+  +R              R S+++   +D  +
Sbjct: 119 CEGRDMTTVVFPDA--DYKFYLDASIDVQAERRFKQGVSSLSLEEIRESIKKRDEIDKNK 176

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVW 209
            +            L IA +       +D++  + + V   I++ + 
Sbjct: 177 AEGS----------LKIAADA----VYIDTSDLTIEQVCEIIISKIH 209


>gi|300715799|ref|YP_003740602.1| ABC transporter, ATP-binding protein [Erwinia billingiae Eb661]
 gi|299061635|emb|CAX58750.1| ABC transporter, ATP-binding protein [Erwinia billingiae Eb661]
          Length = 222

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 17/29 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +N G F+   G  G+GK+T + ++   L+
Sbjct: 30 LNQGEFVLLTGPSGSGKSTLLKIIASLLE 58


>gi|294792291|ref|ZP_06757439.1| dethiobiotin synthetase [Veillonella sp. 6_1_27]
 gi|294457521|gb|EFG25883.1| dethiobiotin synthetase [Veillonella sp. 6_1_27]
          Length = 599

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQR 30
          +  G   +  G +GAGKTT I L+   L  
Sbjct: 34 IRKGCLTALVGPDGAGKTTLIRLIAGLLDA 63


>gi|255578951|ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
 gi|223530132|gb|EEF32044.1| signal recognition particle protein, putative [Ricinus communis]
          Length = 572

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G++G GKTT  + L  +L+++     +       PAA     +++           
Sbjct: 187 ILLAGLQGVGKTTVCAKLANYLKKQGKSCMLVAGDVYRPAA--IDQLVILGEQVGVPVYT 244

Query: 67  E 67
           E
Sbjct: 245 E 245


>gi|172035350|ref|YP_001801851.1| twitching motility protein [Cyanothece sp. ATCC 51142]
 gi|171696804|gb|ACB49785.1| twitching motility protein [Cyanothece sp. ATCC 51142]
          Length = 447

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G  G+GK+T ++ +  ++ +++    +T E       ++ R ++    V  
Sbjct: 217 HKG-LILVTGPTGSGKSTTMAAMVDYINKEHPKHIITIEDPVEFVHQSRRSLIKQREVGM 275

Query: 62  FGAEAEAIVFAAARLD 77
              + +  + AA R D
Sbjct: 276 HTLKFDNALKAALRED 291


>gi|206968994|ref|ZP_03229949.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1134]
 gi|206736035|gb|EDZ53193.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1134]
          Length = 551

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 8/96 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN-------YDVHVTREPGGTPAAEAARHVL 54
             G FI+  G  G+GKTT +   K+ L           Y+  +  E     +A+    V 
Sbjct: 30  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGTRSGEIFYEGVLIEEVADLLSAQEIGMVF 89

Query: 55  LSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALME 89
            +           + + F+   +    ++I+  + E
Sbjct: 90  QNPENQIVMDTVIQELAFSLENIGLPSHIIQKRIAE 125


>gi|146325079|sp|Q04G50|POTA_OENOB RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
          Length = 367

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F +  G  G+GK+T +SL+   LQ    D+ +
Sbjct: 35 GKFYTLLGPSGSGKSTILSLISGRLQPTGGDILI 68


>gi|119509574|ref|ZP_01628721.1| guanylate kinase [Nodularia spumigena CCY9414]
 gi|119465763|gb|EAW46653.1| guanylate kinase [Nodularia spumigena CCY9414]
          Length = 199

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
          + G  I   G  G GK T +  L +      Y V   TR P          + +     +
Sbjct: 18 SPGRLIVLTGPSGVGKGTLMQALLKRHPELYYSVSVTTRSPRPGEINGENYYFISRTKFE 77

Query: 61 EFGAEAEAI 69
          +  ++ E +
Sbjct: 78 QLVSQGEFL 86


>gi|114778399|ref|ZP_01453246.1| hypothetical protein SPV1_08276 [Mariprofundus ferrooxydans PV-1]
 gi|114551362|gb|EAU53919.1| hypothetical protein SPV1_08276 [Mariprofundus ferrooxydans PV-1]
          Length = 492

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           N  L   FEG + AGK + I  + + L  ++Y +     P G P+ E      L      
Sbjct: 295 NKSLIAVFEGSDAAGKGSAIRRISQALDARHYRII----PIGAPSDEELAQPYLWRFWRH 350

Query: 62  FGAEAEAIVF 71
                E  +F
Sbjct: 351 VPGNGEFTIF 360


>gi|86607558|ref|YP_476320.1| guanylate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|119371309|sp|Q2JQ59|KGUA_SYNJB RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|86556100|gb|ABD01057.1| guanylate kinase, putative [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 221

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 4/96 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  +   G  G GK T ++ L++        V VT  P      E   +   S      
Sbjct: 31  RGRLVVLTGPSGVGKGTLVNQLRQRHPELYLSVSVTTRPPRPSEQEGVNYYFRSREEFLN 90

Query: 63  GAEAEAIV----FAAARLDHVENVIRPALMEGKILL 94
             EA  ++    +A         ++   L +G+ +L
Sbjct: 91  LIEANELLEWAQYAGNFYGTPREIVFQKLNQGQDVL 126


>gi|3329471|gb|AAC26856.1| 5'-adenylylsulfate kinase [Ulva intestinalis]
          Length = 271

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 17/70 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L  +                      LL       G  +  
Sbjct: 69  FTGLSGSGKSTVACTLEHALNARGKMT-----------------ALLDGDNVRHGLNSNL 111

Query: 69  IVFAAARLDH 78
              A  R +H
Sbjct: 112 TFTAEDRTEH 121


>gi|56698679|ref|YP_169056.1| hypothetical protein SPO3868 [Ruegeria pomeroyi DSS-3]
 gi|56680416|gb|AAV97082.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 500

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 20/109 (18%)

Query: 124 SVQEVMPD--CTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERK--------DVMIHEK 172
                 PD     +  D+  +I L R          A LD+ +           +     
Sbjct: 345 VSGRPHPDGAVAFLFEDITAEITLTRRFRSELELGQAVLDHLDAAIAVFASDGSLAFSN- 403

Query: 173 RRQIFLDIARNQPDR----CHIVDSAHSFQSV--ATNILNIVWELVQKR 215
               +  + ++ P+R      I+D+  ++Q +  AT +   + + V  R
Sbjct: 404 --AAYHQLWKSDPERSFAQVTILDATRTWQDLCTATPVWGEIRDFVDSR 450


>gi|13541271|ref|NP_110959.1| ATPase [Thermoplasma volcanium GSS1]
 gi|14324655|dbj|BAB59582.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 593

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           +G+ ++  G  GAGK+T +  L  F   +   V     P     ++  
Sbjct: 256 NGILVA--GSPGAGKSTFVQALAEFFNARGKIVKTMERPRDLDVSKDI 301


>gi|23098984|ref|NP_692450.1| signal recognition particle [Oceanobacillus iheyensis HTE831]
 gi|22777212|dbj|BAC13485.1| signal recognition particle (docking protein) [Oceanobacillus
           iheyensis HTE831]
          Length = 333

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ GAGKTT I  L   L+++  +V +    G T  A A   +
Sbjct: 130 GVNGAGKTTSIGKLAHQLKQEGKNVVLAA--GDTFRAGAIEQL 170


>gi|150016025|ref|YP_001308279.1| guanylate kinase [Clostridium beijerinckii NCIMB 8052]
 gi|149902490|gb|ABR33323.1| Guanylate kinase [Clostridium beijerinckii NCIMB 8052]
          Length = 212

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 36/171 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSC 57
            GL I   G  GAGK T    + +    KN DV +     TR P      E   +  +S 
Sbjct: 6   RGLLIVISGPSGAGKGT----ICKRFMEKNKDVMLSVSATTRSPRAGEV-EGINYFFMSK 60

Query: 58  GVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
                  E+   +  A   D+     ++ +   L  GK ++                   
Sbjct: 61  EQFVEKIESNDFLEYAEVYDNYYGTPKSNVEEMLQSGKDVIL---------------EID 105

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                 ++E + +        +  LP   +   +R+ NR S    + +  F
Sbjct: 106 IQGALKVKENTREG-----VFVFILPPSMEELKQRIINRGSETNESLMKRF 151


>gi|116490693|ref|YP_810237.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Oenococcus oeni PSU-1]
 gi|118586188|ref|ZP_01543658.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Oenococcus oeni ATCC BAA-1163]
 gi|290890108|ref|ZP_06553191.1| hypothetical protein AWRIB429_0581 [Oenococcus oeni AWRIB429]
 gi|116091418|gb|ABJ56572.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Oenococcus oeni PSU-1]
 gi|118433374|gb|EAV40070.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Oenococcus oeni ATCC BAA-1163]
 gi|290480299|gb|EFD88940.1| hypothetical protein AWRIB429_0581 [Oenococcus oeni AWRIB429]
          Length = 372

 Score = 36.2 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F +  G  G+GK+T +SL+   LQ    D+ +
Sbjct: 40 GKFYTLLGPSGSGKSTILSLISGRLQPTGGDILI 73


>gi|326495956|dbj|BAJ90600.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326496358|dbj|BAJ94641.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 390

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 27/163 (16%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  G GK T I+ L K +  +  + V H TR P          H      +++  +
Sbjct: 131 VVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRSPRVKEIDGVHYHFAGRSKMEQDIS 190

Query: 65  EAEAIVFAAARLDHVENVIRPAL---MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           E E + FA    +     I        EGK  + D         QG   S +   L++  
Sbjct: 191 EGEFLEFAHVHGNLYGTSIEAVESVTDEGKRCILD------IDVQGA-RSVRASSLEA-- 241

Query: 122 EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
                        I   P   +   +R++ R +  E       
Sbjct: 242 -----------VFIFVCPPSFEELEQRLRARGTETEEQIQKRL 273


>gi|320170480|gb|EFW47379.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 218

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 17/88 (19%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFER----KDVMIHEKRRQIFLDIARNQPD 186
           D  I LDLP D    R + R         DYF+     + +  H         I    P 
Sbjct: 142 DLCINLDLPQDTARARRKCRDYGEHPDPADYFDSVVWPRYIDYH--------KIIAEHPG 193

Query: 187 --RCHIVDSAHSFQSVATNILNIVWELV 212
               H        + +   +++ + ++V
Sbjct: 194 LLSFH---GDAPREQIVDAVIDEIKKIV 218


>gi|319411807|emb|CBQ73850.1| related to FAP7-involved in the oxidative stress response
           [Sporisorium reilianum]
          Length = 213

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 30/221 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G GK+TH SLL             T  P  + ++   R + +   V + G   
Sbjct: 8   IVITGTPGTGKSTHSSLL-----------VSTYTPSSSSSSHPLRQIDVGVVVKKEGFYT 56

Query: 67  EAI---VFAAARLDHVENVIRPA--LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           E +          D + + + P       + +  D F     A   E+          + 
Sbjct: 57  EYLEEWQSYEVNEDQLLDHLEPFTGTKAPEPVDSDDFDPQELALAKEQGEEAEERGGLVL 116

Query: 122 EISVQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +    +V P    D  ++L     +  +R++ R    +       E  +  I        
Sbjct: 117 DWHTCDVWPERWVDLVVVLRCDHGVLWQRLEKRGYPLKKIQ----ENNEAEIMGVVAD-- 170

Query: 178 LDIARNQP-DRCHIVDS--AHSFQSVATNILNIVWELVQKR 215
            D   + P +    ++S  +   +     I+  +    Q R
Sbjct: 171 -DARESYPAEAIVELNSQESGDVEENVERIIQWIHAWRQAR 210


>gi|331654229|ref|ZP_08355229.1| adenylyl-sulfate kinase [Escherichia coli M718]
 gi|331047611|gb|EGI19688.1| adenylyl-sulfate kinase [Escherichia coli M718]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|304386221|ref|ZP_07368554.1| excision endonuclease subunit UvrA [Pediococcus acidilactici DSM
           20284]
 gi|304327578|gb|EFL94805.1| excision endonuclease subunit UvrA [Pediococcus acidilactici DSM
           20284]
          Length = 947

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G FI+  G+ G+GK+T ++++ + +  +  +   + +PG   +    +++
Sbjct: 632 GKFIAVTGVSGSGKSTLVNMVLKRVLAQKLN-RNSEKPGKYKSVSGIKNI 680


>gi|293392032|ref|ZP_06636366.1| putrescine/spermidine ABC transporter ATPase protein
          [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952566|gb|EFE02685.1| putrescine/spermidine ABC transporter ATPase protein
          [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 372

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLLA 57


>gi|284166770|ref|YP_003405049.1| PilT protein domain protein [Haloterrigena turkmenica DSM 5511]
 gi|284016425|gb|ADB62376.1| PilT protein domain protein [Haloterrigena turkmenica DSM 5511]
          Length = 625

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ IS  G  GAGK+T    + RF+   +Y V    +P              +    +
Sbjct: 260 QRGVLIS--GAPGAGKSTFAQAVARFISDHDYAVKTMEKPRDLQVGPDITQY--TELGGQ 315

Query: 62  FGAEAEAIVF 71
               A+A++ 
Sbjct: 316 MAKTADALLM 325


>gi|270290696|ref|ZP_06196920.1| excinuclease ABC, A subunit [Pediococcus acidilactici 7_4]
 gi|270280756|gb|EFA26590.1| excinuclease ABC, A subunit [Pediococcus acidilactici 7_4]
          Length = 947

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G FI+  G+ G+GK+T ++++ + +  +  +   + +PG   +    +++
Sbjct: 632 GKFIAVTGVSGSGKSTLVNMVLKRVLAQKLN-RNSEKPGKYKSVSGIKNI 680


>gi|262038236|ref|ZP_06011626.1| Fe(3+) ions import ATP-binding protein FbpC [Leptotrichia
          goodfellowii F0264]
 gi|261747703|gb|EEY35152.1| Fe(3+) ions import ATP-binding protein FbpC [Leptotrichia
          goodfellowii F0264]
          Length = 354

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +NSG FI   G  G GKTT + ++ 
Sbjct: 33 INSGEFICLLGPSGCGKTTVLRMIA 57


>gi|239833060|ref|ZP_04681389.1| signal recognition particle-docking protein FtsY [Ochrobactrum
           intermedium LMG 3301]
 gi|239825327|gb|EEQ96895.1| signal recognition particle-docking protein FtsY [Ochrobactrum
           intermedium LMG 3301]
          Length = 490

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 294 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 349

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 350 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 395


>gi|209746414|gb|ACI71514.1| putative DNA repair protein [Escherichia coli]
 gi|320647504|gb|EFX16299.1| dephospho-CoA kinase [Escherichia coli O157:H- str. 493-89]
 gi|320652838|gb|EFX21076.1| dephospho-CoA kinase [Escherichia coli O157:H- str. H 2687]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|251800145|ref|YP_003014876.1| ABC transporter [Paenibacillus sp. JDR-2]
 gi|247547771|gb|ACT04790.1| ABC transporter related [Paenibacillus sp. JDR-2]
          Length = 255

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+F G  G GK+T + ++ 
Sbjct: 30 RGQFITFIGPSGCGKSTLLKIVA 52


>gi|160915686|ref|ZP_02077894.1| hypothetical protein EUBDOL_01695 [Eubacterium dolichum DSM 3991]
 gi|158432162|gb|EDP10451.1| hypothetical protein EUBDOL_01695 [Eubacterium dolichum DSM 3991]
          Length = 348

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 2  NSGL-FISFEGIEGAGKTTHISLLKRFLQ 29
          + G  FI   G  G GKTT + L+  FL+
Sbjct: 25 SQGKHFIVLAGPSGCGKTTLLQLIAGFLK 53


>gi|187918498|ref|YP_001884061.1| spermidine/putrescine transport ATP-binding protein PotA
          [Borrelia hermsii DAH]
 gi|119861346|gb|AAX17141.1| spermidine/putrescine transport ATP-binding protein PotA
          [Borrelia hermsii DAH]
          Length = 348

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FI+  G  G GKTT I ++  FL +    +H 
Sbjct: 35 FITLLGPSGCGKTTLIKIIGGFLNQTEGKIHF 66


>gi|118477392|ref|YP_894543.1| branched-chain amino acid ABC transporter ATP-binding protein
          [Bacillus thuringiensis str. Al Hakam]
 gi|118416617|gb|ABK85036.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT
          family [Bacillus thuringiensis str. Al Hakam]
          Length = 263

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 34 KKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 84


>gi|86606200|ref|YP_474963.1| adenylylsulfate kinase [Synechococcus sp. JA-3-3Ab]
 gi|123506338|sp|Q2JUC0|CYSC_SYNJA RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|86554742|gb|ABC99700.1| adenylylsulfate kinase [Synechococcus sp. JA-3-3Ab]
          Length = 176

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 34/140 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGKTT    + + LQ     V                  +L   +       E 
Sbjct: 10  FTGLSGAGKTTLSCGVAQQLQALGLPVE-----------------VLDGDLVRQHLSKEL 52

Query: 69  IVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R ++V  +  +   L    +++    + +   Y+  R   +    + ++     
Sbjct: 53  GFSRADRDENVRRIGFVAEMLTRHGVIVL---VSAISPYRATRQEVRQQIGNFIE----- 104

Query: 127 EVMPDCTIILDLPVDIGLKR 146
                  + +D P+++  +R
Sbjct: 105 -------VFVDAPLEVCEQR 117


>gi|22124736|ref|NP_668159.1| adenylylsulfate kinase [Yersinia pestis KIM 10]
 gi|45440180|ref|NP_991719.1| adenylylsulfate kinase [Yersinia pestis biovar Microtus str. 91001]
 gi|21957554|gb|AAM84410.1|AE013685_4 adenosine 5'-phosphosulfate kinase [Yersinia pestis KIM 10]
 gi|45435036|gb|AAS60596.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 234

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 66  FTGLSGSGKSTLAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 108

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 109 GFSDADRRENIRRVGEVAKLMVDAGLVVLT 138


>gi|1574494|gb|AAC23293.1| cytidylate kinase 2 (cmkB) [Haemophilus influenzae Rd KW20]
          Length = 265

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 43 GMIITVDGPSGAGKGTLCYALAEKL 67


>gi|85702783|ref|ZP_01033887.1| polyphosphate kinase 2, putative [Roseovarius sp. 217]
 gi|85671711|gb|EAQ26568.1| polyphosphate kinase 2, putative [Roseovarius sp. 217]
          Length = 289

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I   + +L  +   V    +P    A +                  
Sbjct: 76  IVFEGRDAAGKGGTIKRFREYLNPRGARVVALSKPSDVEATQW----------------- 118

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    +DH+          G I+L DR   
Sbjct: 119 ----YFQRYIDHLP-------AGGDIVLYDRSWY 141


>gi|57238049|ref|YP_179298.1| guanylate kinase [Campylobacter jejuni RM1221]
 gi|86150330|ref|ZP_01068556.1| guanylate kinase, putative [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596534|ref|ZP_01099771.1| guanylate kinase, putative [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|167005764|ref|ZP_02271522.1| guanylate kinase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|81353485|sp|Q5HTT7|KGUA_CAMJR RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|57166853|gb|AAW35632.1| guanylate kinase, putative [Campylobacter jejuni RM1221]
 gi|85839155|gb|EAQ56418.1| guanylate kinase, putative [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88191375|gb|EAQ95347.1| guanylate kinase, putative [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|315058609|gb|ADT72938.1| Guanylate kinase [Campylobacter jejuni subsp. jejuni S3]
 gi|315926595|gb|EFV05976.1| Guanylate kinase [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315930156|gb|EFV09280.1| guanylate kinase [Campylobacter jejuni subsp. jejuni 305]
          Length = 205

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  +   G  GAGK+T +  L    + + Y      TR+P          H + S    
Sbjct: 2   QGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGIHYHFI-SHEEF 60

Query: 61  EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
           + G +++  +  A   ++         + AL  GKI++ D
Sbjct: 61  QKGIDSDHFLEWARVHENFYGTSLKHTQNALDNGKIVVFD 100


>gi|304440264|ref|ZP_07400154.1| cytidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371313|gb|EFM24929.1| cytidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 210

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 72/233 (30%), Gaps = 54/233 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  G+GK+T    L + L     +   T            R +      +    + 
Sbjct: 3   IAIDGPAGSGKSTIAKKLAKTL---GIEYIDT--------GAMYRALAFYMNENNLSLQE 51

Query: 67  ---EAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
              E  +    F   R       I   +   +I        SS A +  +D      L  
Sbjct: 52  LKNEMDLINIEFKKERTFINGKDISDFIRTNEI--------SSLASKVSKDKEIREKLVD 103

Query: 120 LQE-------ISVQEVMPDCT----------IILDLPVDI-GLKRVQNRYSLRESACLDY 161
           LQ          ++    D T            LD    +   +R+ +         LD 
Sbjct: 104 LQRKLADKVSCVMEGR--DITSVVLKDAEYKFYLDANPMVRAKRRLNDLKGKDSKITLDE 161

Query: 162 F--ERKDVMIHEKRRQIF-LDIARNQPDRCHIVDSAH-SFQSVATNILNIVWE 210
              E ++    +K R+   L I ++       +D++  + + V   IL+ V +
Sbjct: 162 LIAEIEERDKRDKTRENSPLQITKDSNY----IDTSEMTVEDVVNKILSYVGD 210


>gi|258592392|emb|CBE68701.1| Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) [NC10 bacterium
           'Dutch sediment']
          Length = 374

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 31/151 (20%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHV--------TREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G+GKT  + +L   L+ +   V +        + +P       + R     C       E
Sbjct: 73  GSGKTPCVEMLAGRLRERGQQVVIILRGYRSDSTKPTVVSDGTSVR-----CKPPVAADE 127

Query: 66  AEAI---------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           A  +         +  A R   V  V    +  G I+L D F      ++        + 
Sbjct: 128 AYLLARHLPGVAVLTGADR-YRVGEVAIEQVACGVIILDDGFQ-----HRRLHRDLDIVL 181

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRV 147
           +D++  +    ++P    +L  P +  L+R 
Sbjct: 182 VDAVNPLGYGRLLPSG--LLREPPE-ALERA 209


>gi|293401077|ref|ZP_06645222.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306103|gb|EFE47347.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 527

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          F++  G  G GKTT + +L  FL+     V    E
Sbjct: 36 FVTLLGPSGCGKTTLLRILGGFLEASEGHVIFDGE 70


>gi|288919860|ref|ZP_06414184.1| dephospho-CoA kinase [Frankia sp. EUN1f]
 gi|288348775|gb|EFC83028.1| dephospho-CoA kinase [Frankia sp. EUN1f]
          Length = 217

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 36/85 (42%), Gaps = 13/85 (15%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  ++++ P ++ L+R+  R   R+ A       +      +       +A        +
Sbjct: 123 DLVLVVEAPRELRLERLARRGLPRDQAEA-RMAAQATDEQRR------AVAD------IL 169

Query: 191 VDSAHSFQSVATNILNIVWELVQKR 215
           +D++ +   ++  +  +  EL+++R
Sbjct: 170 IDNSGTIDDLSARVREVWQELLRRR 194


>gi|260662389|ref|ZP_05863284.1| ABC transporter ATP-binding component [Lactobacillus fermentum
           28-3-CHN]
 gi|260553080|gb|EEX26023.1| ABC transporter ATP-binding component [Lactobacillus fermentum
           28-3-CHN]
          Length = 253

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 35/183 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHV 53
           +N G FI+  G  GAGK+T  +++   L            D+    + G T   +    V
Sbjct: 33  INPGDFITIVGTNGAGKSTLFNVVGGNLTADGGQLLHNGQDITHLSQEGRT---KFLARV 89

Query: 54  LLSCGVDEFGAEA--EAIVFAAARLD---HVENVIRPALMEGKILLCD-------RFLDS 101
                +         E ++ A  R      V   ++  L E K L+         R + +
Sbjct: 90  FQDPKLGTAPRMTVAENLLLAEKRGQARHLVFRRLKSRLTEFKTLVATMNNGLENRLMTA 149

Query: 102 SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRES 156
           + A  G +  +    + +L+        PD  ++LD     L        +         
Sbjct: 150 TGALSGGQRQALSFLMATLK-------RPDI-LLLDEHTAALDPHTSATLMAATDQRIRE 201

Query: 157 ACL 159
             L
Sbjct: 202 DKL 204


>gi|323342463|ref|ZP_08082695.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Erysipelothrix rhusiopathiae
          ATCC 19414]
 gi|322463575|gb|EFY08769.1| spermidine/putrescine ABC superfamily ATP binding cassette
          transporter, ABC protein [Erysipelothrix rhusiopathiae
          ATCC 19414]
          Length = 347

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 20/32 (62%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          F++  G  G GKTT + +L  FL++ + +V+ 
Sbjct: 32 FVTLLGPSGCGKTTLLRILGGFLEQSSGEVYF 63


>gi|258546048|ref|ZP_05706282.1| polyphosphate kinase 2 [Cardiobacterium hominis ATCC 15826]
 gi|258518705|gb|EEV87564.1| polyphosphate kinase 2 [Cardiobacterium hominis ATCC 15826]
          Length = 387

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 28/94 (29%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P  T A +                  
Sbjct: 161 ILFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTETEAGQW----------------- 203

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                      + +  I+     G+I+L DR   
Sbjct: 204 -----------YFQRYIKHLPTRGEIVLFDRSWY 226


>gi|300022199|ref|YP_003754810.1| hypothetical protein Hden_0669 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524020|gb|ADJ22489.1| protein of unknown function DUF344 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 364

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 46/164 (28%), Gaps = 54/164 (32%)

Query: 5   LFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
             I  FEG + AGK   I      L  +   V    +P      +               
Sbjct: 134 RIIVLFEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPNEVERGQW-------------- 179

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD----SSQHLFLDS 119
                  +    + H+  +       G+I+L DR   S Y   G        S   + + 
Sbjct: 180 -------YFQRYVQHLPTL-------GEIVLFDR---SWYNRAGVERVMGFCSDEEYREF 222

Query: 120 LQEISVQEVMPD----CT--------IILDLPVDIGLKRVQNRY 151
           L+E+      PD     T            +  +   +R + R 
Sbjct: 223 LREV------PDFERNLTRSGIHLVKFWFSVSREEQSRRFRERK 260


>gi|253689721|ref|YP_003018911.1| adenylylsulfate kinase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756299|gb|ACT14375.1| adenylylsulfate kinase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 205

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ I F G+ G+GK+T    L++ L ++    +                 LL      
Sbjct: 30  HQGVVIWFTGLSGSGKSTLAGALEQALHQRGVSTY-----------------LLDGDNVR 72

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +       R +++     V +  +  G ++L 
Sbjct: 73  HGLCRDLGFTDDDRRENIRRVGEVAKLMVDAGLVVLT 109


>gi|251792214|ref|YP_003006934.1| putrescine/spermidine ABC transporter ATPase protein
          [Aggregatibacter aphrophilus NJ8700]
 gi|247533601|gb|ACS96847.1| spermidine/putrescine import ATP-binding protein PotA
          [Aggregatibacter aphrophilus NJ8700]
          Length = 400

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 61 INNGEFLTILGPSGCGKTTVLRLLA 85


>gi|254037518|ref|ZP_04871595.1| dephospho-CoA kinase [Escherichia sp. 1_1_43]
 gi|226840624|gb|EEH72626.1| dephospho-CoA kinase [Escherichia sp. 1_1_43]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|225572634|ref|ZP_03781389.1| hypothetical protein RUMHYD_00822 [Blautia hydrogenotrophica DSM
          10507]
 gi|225040016|gb|EEG50262.1| hypothetical protein RUMHYD_00822 [Blautia hydrogenotrophica DSM
          10507]
          Length = 562

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          NSG F+   G  G GKTT + LLKR L    
Sbjct: 29 NSGEFVVLCGESGCGKTTLLRLLKRELAPHG 59


>gi|188588558|ref|YP_001921764.1| aliphatic sulfonates import ATP-binding protein SsuB [Clostridium
          botulinum E3 str. Alaska E43]
 gi|188498839|gb|ACD51975.1| aliphatic sulfonates import ATP-binding protein SsuB [Clostridium
          botulinum E3 str. Alaska E43]
          Length = 255

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 23/69 (33%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
          N G FIS  G  G GK+T ++++   L+     +    E       +           + 
Sbjct: 31 NDGEFISILGPSGCGKSTLLNIISGLLKASTGSILYKDEDIKNNLNKIGYMFQKDHLFEW 90

Query: 62 FGAEAEAIV 70
                 ++
Sbjct: 91 LNVWDNLLI 99


>gi|182415115|ref|YP_001820181.1| LAO/AO transport system ATPase [Opitutus terrae PB90-1]
 gi|177842329|gb|ACB76581.1| LAO/AO transport system ATPase [Opitutus terrae PB90-1]
          Length = 374

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLS 56
           I   GI GAGK+T I     +L  + +++  +  +P     GG+   +  R   LS
Sbjct: 106 IGITGIPGAGKSTFIEAFGTYLTGQGHEIAVLAIDPSSTLTGGSILGDKVRMEQLS 161


>gi|126663452|ref|ZP_01734449.1| ATPase-like protein [Flavobacteria bacterium BAL38]
 gi|126624400|gb|EAZ95091.1| ATPase-like protein [Flavobacteria bacterium BAL38]
          Length = 179

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 74/218 (33%), Gaps = 44/218 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCG 58
           MN    +   G   +GKTT I  LK       +  +  V+RE       +    + L   
Sbjct: 1   MNK-EIVVLIGGPSSGKTTLIDALKE----NGHTCYPEVSREVIREAQEQGIEQLFLEKP 55

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFL 117
                     ++F+   L+  +   + AL E   I+  DR +    AY      S   F 
Sbjct: 56  ----------LLFSELLLEGRKRQYKEALNESSNIVFLDRGIPDVLAYMHYIGDSYPSFF 105

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIHEKRRQ 175
           D     + QE     T I  LP           +     +  + +E   + V+IHE   +
Sbjct: 106 DK----ACQEFK--YTAIFVLPP----------WKEIYVSDAERYENYEQAVLIHEHLIE 149

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
            +    ++       V       +VA  +  I+  LV+
Sbjct: 150 TY----KSYGYSIREV----PKDTVANRVDFIMKHLVK 179


>gi|119470248|ref|ZP_01613007.1| ABC sorbitol/mannitol transporter, ATPase subunit
          [Alteromonadales bacterium TW-7]
 gi|119446420|gb|EAW27695.1| ABC sorbitol/mannitol transporter, ATPase subunit
          [Alteromonadales bacterium TW-7]
          Length = 336

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKDGEFIVFVGPSGCGKSTLLRMIA 50


>gi|118431315|ref|NP_147690.2| putative ABC transporter, ATP binding protein [Aeropyrum pernix
          K1]
 gi|116062638|dbj|BAA80040.2| putative ABC transporter, ATP binding protein [Aeropyrum pernix
          K1]
          Length = 249

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          ++ G  ++  G  G+GKTT + LL   ++     V    E  G+P     R +  +    
Sbjct: 29 LDPGSLVALLGPNGSGKTTLLRLLAGIIKPSRGRV----EVCGSPPGRVRRMLGYAPASP 84

Query: 61 EFGAEAEA 68
          E     +A
Sbjct: 85 EVDPRLKA 92


>gi|160880635|ref|YP_001559603.1| chloramphenicol phosphotransferase family protein [Clostridium
          phytofermentans ISDg]
 gi|160429301|gb|ABX42864.1| Chloramphenicol phosphotransferase family protein [Clostridium
          phytofermentans ISDg]
          Length = 192

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 14/33 (42%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY 33
          M  G  I   G+  AGKTT    L+  L    Y
Sbjct: 1  MKKGKIIYLNGVSSAGKTTLSKTLQERLTEPYY 33


>gi|90408836|ref|ZP_01216978.1| uridine kinase [Psychromonas sp. CNPT3]
 gi|90310063|gb|EAS38206.1| uridine kinase [Psychromonas sp. CNPT3]
          Length = 220

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           ++  GIEG GK      + + L+ +   V    T       A+++ R        +   +
Sbjct: 30  VAISGIEGGGKRHLTEKVAQALRLEGLSVAIVHTE---DWSASDSVR-------FNAMNS 79

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKI 92
             E  + A    +  E +I P  + G +
Sbjct: 80  PEEYYLNAYRFSEMFEQLILPLKLFGHV 107


>gi|24796803|gb|AAN64479.1| putative ATP-binding-cassette transporter protein [Oryza sativa
           Japonica Group]
 gi|108707523|gb|ABF95318.1| ABC transporter family protein, putative [Oryza sativa Japonica
           Group]
          Length = 765

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARH-VLLSCGVDEFGAEAE 67
           G  GAGKTT I  L   +QR +    V +  EP G    +     V+    +      AE
Sbjct: 149 GASGAGKTTLIDALADRIQRDSLRGAVTLNGEPLGGRMLKVISAYVMQDDLLYPMLTVAE 208

Query: 68  AIVFAA 73
            ++++A
Sbjct: 209 TLMYSA 214


>gi|21553403|gb|AAM62496.1| putative adenosine phosphosulfate kinase [Arabidopsis thaliana]
          Length = 276

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 42/152 (27%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L + L +K    +                 +L      
Sbjct: 99  QKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCY-----------------ILDGDNVR 141

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
            G   +    A  R +++     V +     G I +      S  + Y+ +RD       
Sbjct: 142 HGLNRDLSFKAEDRAENIRRVGEVAKLFADAGIICIA-----SLISPYRTDRD------- 189

Query: 118 DSLQEISVQEVMP--DCT-IILDLPVDIGLKR 146
                 + + ++P  D   + +D+P+ +   R
Sbjct: 190 ------ACRSLLPEGDFVEVFMDVPLSVCEAR 215


>gi|33597495|ref|NP_885138.1| glycerol-3-phosphate transporter ATP-binding subunit [Bordetella
           parapertussis 12822]
 gi|81836568|sp|Q7W6G5|UGPC_BORPA RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
           UgpC
 gi|33573923|emb|CAE38239.1| sn-glycerol-3-phosphate transport ATP-binding protein [Bordetella
           parapertussis]
          Length = 362

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 10/74 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLK--------RFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
           G FI   G  G GK+T + ++           L      V  T EP     A   ++  L
Sbjct: 30  GEFIVIVGPSGCGKSTLMRMVAGLETVTEGEILIDD--KVVNTLEPAERDIAMVFQNYAL 87

Query: 56  SCGVDEFGAEAEAI 69
              +  F   A  +
Sbjct: 88  YPHMSVFDNMAYGL 101


>gi|26249156|ref|NP_755196.1| adenylylsulfate kinase [Escherichia coli CFT073]
 gi|91212118|ref|YP_542104.1| adenylylsulfate kinase [Escherichia coli UTI89]
 gi|117624985|ref|YP_853973.1| adenylylsulfate kinase [Escherichia coli APEC O1]
 gi|215488070|ref|YP_002330501.1| adenylylsulfate kinase [Escherichia coli O127:H6 str. E2348/69]
 gi|218559743|ref|YP_002392656.1| adenylylsulfate kinase [Escherichia coli S88]
 gi|218690877|ref|YP_002399089.1| adenylylsulfate kinase [Escherichia coli ED1a]
 gi|218701241|ref|YP_002408870.1| adenylylsulfate kinase [Escherichia coli IAI39]
 gi|227888293|ref|ZP_04006098.1| adenylylsulfate kinase [Escherichia coli 83972]
 gi|237706620|ref|ZP_04537101.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Escherichia sp. 3_2_53FAA]
 gi|300941133|ref|ZP_07155645.1| adenylylsulfate kinase [Escherichia coli MS 21-1]
 gi|300976786|ref|ZP_07173603.1| adenylylsulfate kinase [Escherichia coli MS 45-1]
 gi|301049487|ref|ZP_07196445.1| adenylylsulfate kinase [Escherichia coli MS 185-1]
 gi|306812368|ref|ZP_07446566.1| adenylylsulfate kinase [Escherichia coli NC101]
 gi|312964983|ref|ZP_07779223.1| adenylylsulfate kinase [Escherichia coli 2362-75]
 gi|331658865|ref|ZP_08359807.1| adenylyl-sulfate kinase [Escherichia coli TA206]
 gi|331684369|ref|ZP_08384961.1| adenylyl-sulfate kinase [Escherichia coli H299]
 gi|29336701|sp|Q8FEJ2|CYSC_ECOL6 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|122422681|sp|Q1R7U1|CYSC_ECOUT RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|166221086|sp|A1AEU4|CYSC_ECOK1 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|226722288|sp|B7MKM4|CYSC_ECO45 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|226722289|sp|B7NT94|CYSC_ECO7I RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|254766500|sp|B7UHG9|CYSC_ECO27 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|254766502|sp|B7MYQ5|CYSC_ECO81 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|26109563|gb|AAN81766.1|AE016765_168 Adenylylsulfate kinase [Escherichia coli CFT073]
 gi|91073692|gb|ABE08573.1| adenylylsulfate kinase [Escherichia coli UTI89]
 gi|115514109|gb|ABJ02184.1| sulfate adenylyltransferase subunit 1 [Escherichia coli APEC O1]
 gi|215266142|emb|CAS10568.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218366512|emb|CAR04265.1| adenosine 5'-phosphosulfate kinase [Escherichia coli S88]
 gi|218371227|emb|CAR19058.1| adenosine 5'-phosphosulfate kinase [Escherichia coli IAI39]
 gi|218428441|emb|CAR09222.1| adenosine 5'-phosphosulfate kinase [Escherichia coli ED1a]
 gi|222034447|emb|CAP77189.1| adenylyl-sulfate kinase [Escherichia coli LF82]
 gi|226899660|gb|EEH85919.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Escherichia sp. 3_2_53FAA]
 gi|227834562|gb|EEJ45028.1| adenylylsulfate kinase [Escherichia coli 83972]
 gi|294489625|gb|ADE88381.1| adenylylsulfate kinase [Escherichia coli IHE3034]
 gi|300298718|gb|EFJ55103.1| adenylylsulfate kinase [Escherichia coli MS 185-1]
 gi|300409972|gb|EFJ93510.1| adenylylsulfate kinase [Escherichia coli MS 45-1]
 gi|300454176|gb|EFK17669.1| adenylylsulfate kinase [Escherichia coli MS 21-1]
 gi|305854406|gb|EFM54844.1| adenylylsulfate kinase [Escherichia coli NC101]
 gi|307554729|gb|ADN47504.1| adenylylsulfate kinase [Escherichia coli ABU 83972]
 gi|307625674|gb|ADN69978.1| adenylylsulfate kinase [Escherichia coli UM146]
 gi|312290539|gb|EFR18419.1| adenylylsulfate kinase [Escherichia coli 2362-75]
 gi|312947282|gb|ADR28109.1| adenylylsulfate kinase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315289246|gb|EFU48641.1| adenylylsulfate kinase [Escherichia coli MS 110-3]
 gi|315293688|gb|EFU53040.1| adenylylsulfate kinase [Escherichia coli MS 153-1]
 gi|315298756|gb|EFU58010.1| adenylylsulfate kinase [Escherichia coli MS 16-3]
 gi|320194889|gb|EFW69518.1| Adenylylsulfate kinase [Escherichia coli WV_060327]
 gi|323188832|gb|EFZ74117.1| adenylylsulfate kinase [Escherichia coli RN587/1]
 gi|323951028|gb|EGB46904.1| adenylylsulfate kinase [Escherichia coli H252]
 gi|323957236|gb|EGB52960.1| adenylylsulfate kinase [Escherichia coli H263]
 gi|324005716|gb|EGB74935.1| adenylylsulfate kinase [Escherichia coli MS 57-2]
 gi|331053447|gb|EGI25476.1| adenylyl-sulfate kinase [Escherichia coli TA206]
 gi|331077984|gb|EGI49190.1| adenylyl-sulfate kinase [Escherichia coli H299]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|15225999|ref|NP_179082.1| APK (APS KINASE); ATP binding / adenylylsulfate kinase/ kinase/
           transferase, transferring phosphorus-containing groups
           [Arabidopsis thaliana]
 gi|7387811|sp|Q43295|KAP1_ARATH RecName: Full=Adenylyl-sulfate kinase 1, chloroplastic; AltName:
           Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase; Short=APS
           kinase; Flags: Precursor
 gi|414737|emb|CAA53426.1| APS kinase [Arabidopsis thaliana]
 gi|450235|gb|AAC50035.1| APS kinase [Arabidopsis thaliana]
 gi|1575322|gb|AAC50034.1| APS kinase [Arabidopsis thaliana]
 gi|3252812|gb|AAC24182.1| putative adenosine phosphosulfate kinase [Arabidopsis thaliana]
 gi|15810038|gb|AAL06946.1| At2g14750/F26C24.11 [Arabidopsis thaliana]
 gi|22135773|gb|AAM91043.1| At2g14750/F26C24.11 [Arabidopsis thaliana]
 gi|330251236|gb|AEC06330.1| Adenylyl-sulfate kinase 1 [Arabidopsis thaliana]
          Length = 276

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 42/152 (27%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I   G+ G+GK+T    L + L +K    +                 +L      
Sbjct: 99  QKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCY-----------------ILDGDNVR 141

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117
            G   +    A  R +++     V +     G I +      S  + Y+ +RD       
Sbjct: 142 HGLNRDLSFKAEDRAENIRRVGEVAKLFADAGIICIA-----SLISPYRTDRD------- 189

Query: 118 DSLQEISVQEVMP--DCT-IILDLPVDIGLKR 146
                 + + ++P  D   + +D+P+ +   R
Sbjct: 190 ------ACRSLLPEGDFVEVFMDVPLSVCEAR 215


>gi|124263075|ref|YP_001023545.1| putative transport system kinase [Methylibium petroleiphilum PM1]
 gi|124262321|gb|ABM97310.1| putative transport system kinase [Methylibium petroleiphilum PM1]
          Length = 327

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
          G+ G+GK+T ++ L   L+++   V  V  +P    +  A 
Sbjct: 56 GVPGSGKSTLVAKLTAALRKRGEKVGIVAIDPSSPYSGGAI 96


>gi|326486325|gb|ADZ76158.1| putative adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni]
 gi|326486349|gb|ADZ76181.1| putative adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni]
          Length = 170

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 8/70 (11%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          M +  +I    G+ G+GKTT    L   L+ K  ++            +  R +L     
Sbjct: 1  MKNNPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAY 53

Query: 60 DEFGAEAEAI 69
          D+ G    A+
Sbjct: 54 DKQGRIDMAL 63


>gi|325290858|ref|YP_004267039.1| Taurine-transporting ATPase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966259|gb|ADY57038.1| Taurine-transporting ATPase [Syntrophobotulus glycolicus DSM 8271]
          Length = 299

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           N G FI+  G  G GK+T + ++    ++ + D+ +  +    P  +  R ++L  
Sbjct: 53  NKGEFITIVGPSGCGKSTLLDIIAGLSKQNSGDIFIDNKKITGP--DLDRGIVLQG 106


>gi|309371334|emb|CAP30931.2| CBR-CHE-3 protein [Caenorhabditis briggsae AF16]
          Length = 4802

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 23/113 (20%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
            G  G+GK+T   +L+R L      + VT+           R+ LL     +     + I+
Sbjct: 2507 GAAGSGKSTIWKVLQRALILTKKPLRVTQFNPKA----VNRNKLLGNMDMDTREWTDGII 2562

Query: 71   FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              AAR    +  +         ++CD                   ++++L  +
Sbjct: 2563 TMAAREVQKDTTV------HHWIVCD-------------GDIDPEWVEALNSV 2596


>gi|297616520|ref|YP_003701679.1| ABC transporter [Syntrophothermus lipocalidus DSM 12680]
 gi|297144357|gb|ADI01114.1| ABC transporter related protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 567

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV-LLSCGVDE 61
           G F+   G  GAGKTT +  +   L+  +   + V R+ G  P  E A+ V  LS   ++
Sbjct: 327 GKFVVIMGENGAGKTTLLKNINGLLRPSRGRVIIVGRDTGMLPVEELAKTVGYLSQNPND 386

Query: 62  F 62
           +
Sbjct: 387 Y 387


>gi|258592176|emb|CBE68485.1| Cell division transporter substrate-binding protein FtsY (Signal
           recognition particle receptor) [NC10 bacterium 'Dutch
           sediment']
          Length = 314

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           F GI G+GKTT I  L   L  +   V +
Sbjct: 116 FLGINGSGKTTTIGKLASRLIAEGGHVVL 144


>gi|251779529|ref|ZP_04822449.1| aliphatic sulfonates import ATP-binding protein SsuB [Clostridium
          botulinum E1 str. 'BoNT E Beluga']
 gi|243083844|gb|EES49734.1| aliphatic sulfonates import ATP-binding protein SsuB [Clostridium
          botulinum E1 str. 'BoNT E Beluga']
          Length = 245

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 23/69 (33%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
          N G FIS  G  G GK+T ++++   L+     +    E       +           + 
Sbjct: 21 NDGEFISILGPSGCGKSTLLNIISGLLKASTGSILYKDEDIKNNLNKIGYMFQKDHLFEW 80

Query: 62 FGAEAEAIV 70
                 ++
Sbjct: 81 LNVWDNLLI 89


>gi|229011265|ref|ZP_04168458.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus mycoides DSM 2048]
 gi|228750148|gb|EEL99980.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus mycoides DSM 2048]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITNLSISDRTR 78


>gi|237731336|ref|ZP_04561817.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906875|gb|EEH92793.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 272

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          ++  G  G+GK+T I L+ +       ++ +  +P       A R +
Sbjct: 52 VTILGPSGSGKSTLIRLINQLESLSGGEIFIDGKPISQLRGAALRQL 98


>gi|218290946|ref|ZP_03495003.1| cytidylate kinase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239111|gb|EED06314.1| cytidylate kinase [Alicyclobacillus acidocaldarius LAA1]
          Length = 225

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ 29
          I+ +G  GAGK+T    +   L 
Sbjct: 6  IAIDGPAGAGKSTVAKRVAERLN 28


>gi|219125535|ref|XP_002183033.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405308|gb|EEC45251.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 173

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAAR 51
          I+  G  G+GK+T   L++  L   N        V +  +    P AE  R
Sbjct: 1  IAVAGGPGSGKSTLAELVRDKLNASNESADHEISVVLPMDGYHYPKAELKR 51


>gi|168180603|ref|ZP_02615267.1| guanylate kinase [Clostridium botulinum NCTC 2916]
 gi|182668609|gb|EDT80588.1| guanylate kinase [Clostridium botulinum NCTC 2916]
          Length = 209

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 44/215 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA--ARHVLLSCGV 59
             GL I   G  GAGK T     K  L++++  V V+         E     +  L+   
Sbjct: 3   KKGLLIVISGPSGAGKGTIC---KELLKKEDLWVSVSATTRSPRRGEENGVHYFFLNKDE 59

Query: 60  DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                E +  +  A    ++    ++ +   +  G  ++                    L
Sbjct: 60  FNERIEKDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVI--------------------L 99

Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
            +D    + V+E  P+   I  LP   +    R+ NR S      +  F           
Sbjct: 100 EIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRF----------- 148

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
           +  + +I         +V+   + +     + +I+
Sbjct: 149 KAAYKEINYVSKYNYAVVN--DTVEDAVNKVRSII 181


>gi|220924283|ref|YP_002499585.1| signal recognition particle-docking protein FtsY [Methylobacterium
           nodulans ORS 2060]
 gi|219948890|gb|ACL59282.1| signal recognition particle-docking protein FtsY [Methylobacterium
           nodulans ORS 2060]
          Length = 437

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ GAGKTT I  L +  + +   V +    G T  A A   +
Sbjct: 238 GVNGAGKTTTIGKLAQKFRAQGRSVMLAA--GDTFRAAAIEQL 278


>gi|218531702|ref|YP_002422518.1| carbohydrate kinase, thermoresistant glucokinase family
           [Methylobacterium chloromethanicum CM4]
 gi|218524005|gb|ACK84590.1| carbohydrate kinase, thermoresistant glucokinase family
           [Methylobacterium chloromethanicum CM4]
          Length = 180

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 19/106 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQ---RKNYDVHVT----REPGGTPAAEAARHVLLSCGVDEFG 63
           G+ G+GK+T  +LL   L        D H      R   G P  +AAR   L        
Sbjct: 16  GVSGSGKSTVAALLAERLGWTFADGDDFHTPESIARMRDGHPLDDAARQPWLGRIRAWID 75

Query: 64  AEAEA---------IVFAAARLDHVENVIR---PALMEGKILLCDR 97
           A  EA          +  A R   + +  R     L   + ++ DR
Sbjct: 76  ARIEAGENAVVACSALKRAYRRALIGDPQRVRIVFLEGSRAVIQDR 121


>gi|149280108|ref|ZP_01886232.1| signal recognition particle protein [Pedobacter sp. BAL39]
 gi|149229122|gb|EDM34517.1| signal recognition particle protein [Pedobacter sp. BAL39]
          Length = 446

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 22/53 (41%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           N+   I   G+ GAGKTT    L  +L+ K     +       PAA     +L
Sbjct: 97  NNPTIILIAGLNGAGKTTFTGKLANYLKSKGKKPLLVAGDVYRPAAVDQLQIL 149


>gi|123501468|ref|XP_001328084.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121911022|gb|EAY15861.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 2252

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
             +G  I   G  G GK+T   +L   L +  + 
Sbjct: 1766 RTGAVIV--GPAGCGKSTVWKVLADALTKSGHK 1796


>gi|94263754|ref|ZP_01287561.1| Cytidylate kinase [delta proteobacterium MLMS-1]
 gi|94268567|ref|ZP_01291221.1| Cytidylate kinase [delta proteobacterium MLMS-1]
 gi|93451558|gb|EAT02369.1| Cytidylate kinase [delta proteobacterium MLMS-1]
 gi|93455854|gb|EAT06017.1| Cytidylate kinase [delta proteobacterium MLMS-1]
          Length = 248

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          ++ +G  G GK+T   LL   L     D
Sbjct: 16 VTIDGPSGVGKSTVSRLLAERLAATYLD 43


>gi|163939779|ref|YP_001644663.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
 gi|163861976|gb|ABY43035.1| ABC transporter related [Bacillus weihenstephanensis KBAB4]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITNLSISDRTR 78


>gi|187731484|ref|YP_001881507.1| adenylylsulfate kinase [Shigella boydii CDC 3083-94]
 gi|238691743|sp|B2TZI1|CYSC_SHIB3 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|187428476|gb|ACD07750.1| adenylylsulfate kinase [Shigella boydii CDC 3083-94]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|330717925|ref|ZP_08312525.1| deoxyguanosine kinase [Leuconostoc fallax KCTC 3537]
          Length = 210

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 60/195 (30%), Gaps = 41/195 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT   L+   +           EP G                     +    +   
Sbjct: 10  GVGKTTLTGLIADHM---GTKAFY--EPVGDNPVLPL---------YYSDPKQYGFLLQI 55

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSY------------AYQGERDSSQHLFLDS 119
             L+   ++I+ AL +   +L DR  + D+ +            A            +  
Sbjct: 56  YFLNRRFDMIKQALADDNNVL-DRSIYEDALFTEENHKDGNITDAEMHVYRQLLDNMMSE 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           LQ++  +   PD  +  +   +  L R++ R    E      F+  D +     R+ +  
Sbjct: 115 LQQLPKKA--PDLMVYAETDFETILYRIKKRGRDYEQ-----FDDNDDL-----RKYYYK 162

Query: 180 IARNQPDRCHIVDSA 194
           +     +     D++
Sbjct: 163 MWAAYQNWFDSYDAS 177


>gi|329964416|ref|ZP_08301497.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          fluxus YIT 12057]
 gi|328525465|gb|EGF52513.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          fluxus YIT 12057]
          Length = 463

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|325496201|gb|EGC94060.1| adenylylsulfate kinase [Escherichia fergusonii ECD227]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|313680376|ref|YP_004058115.1| guanylate kinase [Oceanithermus profundus DSM 14977]
 gi|313153091|gb|ADR36942.1| guanylate kinase [Oceanithermus profundus DSM 14977]
          Length = 217

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 72/226 (31%), Gaps = 42/226 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G      G  G GK T  + L   ++        TR P          +  +     E 
Sbjct: 2   RGDLFVMTGASGVGKGTLRARLMERVKLHYSISMTTRPPREGER-HGIDYWFVDEATFER 60

Query: 63  GAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                  +  A  +DH        +  AL  G+ +L +         QG    ++     
Sbjct: 61  TKREGGFLEYATYVDHSYGTPRAPVERALERGEDVLLE------IEVQGALQVAEK---- 110

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                     MP+  +I  +P    L  ++ R  LR    L+  E++     E+ R+   
Sbjct: 111 ----------MPEAQLIFVIPP--SLSELRQRLLLRGKDTLEKIEKR----LERARE--- 151

Query: 179 DIARNQPDRCHIV-----DSAHSFQSVA---TNILNIVWELVQKRV 216
           +IA        +V     D+    + +      I+N +   +++ +
Sbjct: 152 EIALADRFHYVVVNDLLADAVADLERIIMARRRIVNRMRPALERAL 197


>gi|312621162|ref|YP_004022775.1| ABC transporter-like protein [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312201629|gb|ADQ44956.1| ABC transporter related protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 598

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           +  G+ ++  G  G+GKTT ++LL RF
Sbjct: 379 IKKGMMVALVGATGSGKTTIVNLLARF 405


>gi|312134881|ref|YP_004002219.1| guanylate kinase [Caldicellulosiruptor owensensis OL]
 gi|311774932|gb|ADQ04419.1| guanylate kinase [Caldicellulosiruptor owensensis OL]
          Length = 199

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 55/169 (32%), Gaps = 26/169 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           M +GL I   G  G GK T +  L          +   TR+P            +     
Sbjct: 1   MRNGLLIVISGPAGTGKGTVVGKLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E       + +A    ++    ++ +  +L +G  ++                    L 
Sbjct: 61  EEEIKNERFLEYAEYNNNYYGTPKDFVLESLRKGFDVI--------------------LE 100

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE 163
           +++   + +++   D  +I  LP   +   +R+  R +  E       E
Sbjct: 101 IETKGALKIKKAFSDAVLIFLLPPSLEELHRRLIKRGTESEDEIKTRLE 149


>gi|312869613|ref|ZP_07729764.1| ABC transporter, ATP-binding protein [Lactobacillus oris
           PB013-T2-3]
 gi|311094899|gb|EFQ53192.1| ABC transporter, ATP-binding protein [Lactobacillus oris
           PB013-T2-3]
          Length = 608

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           ++  G  GAGKTT I+LL+RF + +   +++  +   +   +  R 
Sbjct: 396 VAIVGPTGAGKTTIINLLERFYEVQGGHIYLDGQDTRSMTRDDLRK 441


>gi|307947355|ref|ZP_07662689.1| spermidine/putrescine import ATP-binding protein PotA [Roseibium
          sp. TrichSKD4]
 gi|307769497|gb|EFO28724.1| spermidine/putrescine import ATP-binding protein PotA [Roseibium
          sp. TrichSKD4]
          Length = 349

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          + G F++  G  G GKTT +  L  FL
Sbjct: 27 SKGEFVTLLGPSGCGKTTLLKALSGFL 53


>gi|302871556|ref|YP_003840192.1| ABC transporter related [Caldicellulosiruptor obsidiansis OB47]
 gi|302574415|gb|ADL42206.1| ABC transporter related [Caldicellulosiruptor obsidiansis OB47]
          Length = 278

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARH 52
           G F++  G+ G+GK+T   L+   L   K Y +        T      R 
Sbjct: 34 RGEFVAILGLNGSGKSTLAKLINGLLIPEKGYVIVDGMNTKDTEKIWDIRR 84


>gi|291530123|emb|CBK95708.1| signal recognition particle subunit FFH/SRP54 (srp54) [Eubacterium
           siraeum 70/3]
          Length = 455

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 39/126 (30%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++GAGKTTH + L ++L+++N                  R +L++C +    A  +  V
Sbjct: 108 GLQGAGKTTHTAKLAKYLKKQNR-----------------RPLLVACDIYRPAAIDQLKV 150

Query: 71  FAAARLDHV------------ENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFL 117
             A+   HV            +  I+ A   G  +++ D            R       +
Sbjct: 151 VGASVDAHVFEMGQTNPVKIAKESIKYAKDNGFDVVILD---------TAGRLHIDEDLM 201

Query: 118 DSLQEI 123
             L++I
Sbjct: 202 KELKDI 207


>gi|260581241|ref|ZP_05849059.1| cytidylate kinase [Haemophilus influenzae RdAW]
 gi|260092068|gb|EEW76013.1| cytidylate kinase [Haemophilus influenzae RdAW]
          Length = 211

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 43 GMIITVDGPSGAGKGTLCYALAEKL 67


>gi|256379924|ref|YP_003103584.1| signal recognition particle protein [Actinosynnema mirum DSM 43827]
 gi|255924227|gb|ACU39738.1| signal recognition particle protein [Actinosynnema mirum DSM 43827]
          Length = 518

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++GAGKTT    L ++L+ + + 
Sbjct: 107 GLQGAGKTTLAGKLAKWLRGQGHT 130


>gi|241602407|ref|XP_002405450.1| oxidoreductase, putative [Ixodes scapularis]
 gi|215502539|gb|EEC12033.1| oxidoreductase, putative [Ixodes scapularis]
          Length = 382

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 16/96 (16%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA-EAI 69
          G+ G GK+  + +L   L+ + + V    E      A+ A+ +    G+  +  +  E +
Sbjct: 6  GVFGTGKS--VRVLVPCLRARGFKV----EAIWGRTADNAKEIAQELGIPFYTNKEDEVL 59

Query: 70 V--------FAAARLDHVENVIRPALMEGKILLCDR 97
          +           +   H    ++ AL  GK +LCDR
Sbjct: 60 LRKTVDFVCIMCSPHQHARIAVK-ALGIGKHVLCDR 94


>gi|190347261|gb|EDK39503.2| hypothetical protein PGUG_03601 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 268

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 64/213 (30%), Gaps = 48/213 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARHVLLSCGVDEF 62
           G  G+GK T  + L      K Y VH++        +   G+   +  R  +    +   
Sbjct: 86  GGPGSGKGTQCAKLV---NEKGY-VHLSAGDLLRAEQNRKGSEYGDLIRQYIREGKIVP- 140

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                A++         +  I+    EG          + +   G         L   ++
Sbjct: 141 QEVTIALL---------QQAIQEKYSEGA---------TKFLVDGFPRKMDQA-LTFEEK 181

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           I+   +    T+  + P  + LKR+  R            +  +  I ++ R  FLD + 
Sbjct: 182 IARSSI----TLFFECPEAVMLKRLLERGKTSG-----RDDDNEESIKKRFR-TFLDTSM 231

Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVW 209
                  +  +   V        V   +   + 
Sbjct: 232 PVVDYFEEQGKVLKVSCDQPVDEVYRQVTEALK 264


>gi|167751041|ref|ZP_02423168.1| hypothetical protein EUBSIR_02026 [Eubacterium siraeum DSM 15702]
 gi|167655959|gb|EDS00089.1| hypothetical protein EUBSIR_02026 [Eubacterium siraeum DSM 15702]
          Length = 455

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 39/126 (30%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++GAGKTTH + L ++L+++N                  R +L++C +    A  +  V
Sbjct: 108 GLQGAGKTTHTAKLAKYLKKQNR-----------------RPLLVACDIYRPAAIDQLKV 150

Query: 71  FAAARLDHV------------ENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFL 117
             A+   HV            +  I+ A   G  +++ D            R       +
Sbjct: 151 VGASVDAHVFEMGQTNPVKIAKESIKYAKDNGFDVVILD---------TAGRLHIDEDLM 201

Query: 118 DSLQEI 123
             L++I
Sbjct: 202 KELKDI 207


>gi|160889751|ref|ZP_02070754.1| hypothetical protein BACUNI_02181 [Bacteroides uniformis ATCC
          8492]
 gi|270294037|ref|ZP_06200239.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478790|ref|ZP_07937942.1| polyamine ABC transporter [Bacteroides sp. 4_1_36]
 gi|156860743|gb|EDO54174.1| hypothetical protein BACUNI_02181 [Bacteroides uniformis ATCC
          8492]
 gi|270275504|gb|EFA21364.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905050|gb|EFV26852.1| polyamine ABC transporter [Bacteroides sp. 4_1_36]
          Length = 468

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|154148920|ref|YP_001406802.1| guanylate kinase [Campylobacter hominis ATCC BAA-381]
 gi|153804929|gb|ABS51936.1| guanylate kinase [Campylobacter hominis ATCC BAA-381]
          Length = 202

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 5/100 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M   + I   G  G+GK+T I  L +      + +   TR+       +   H +     
Sbjct: 1  MGGQILIV-SGPSGSGKSTLIERLMKEENNIYFSISSTTRKIRAGEKDDVNYHYISVSDF 59

Query: 60 DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCD 96
          ++   E E + +A    ++    I+P   AL  GK ++ D
Sbjct: 60 EKGIKEGEFLEYAVVHKNYYGTSIKPVLAALEAGKSVIFD 99


>gi|148380468|ref|YP_001255009.1| guanylate kinase [Clostridium botulinum A str. ATCC 3502]
 gi|153933883|ref|YP_001384691.1| guanylate kinase [Clostridium botulinum A str. ATCC 19397]
 gi|153937415|ref|YP_001388212.1| guanylate kinase [Clostridium botulinum A str. Hall]
 gi|153939037|ref|YP_001391810.1| guanylate kinase [Clostridium botulinum F str. Langeland]
 gi|170755101|ref|YP_001782057.1| guanylate kinase [Clostridium botulinum B1 str. Okra]
 gi|226949867|ref|YP_002804958.1| guanylate kinase [Clostridium botulinum A2 str. Kyoto]
 gi|237795953|ref|YP_002863505.1| guanylate kinase [Clostridium botulinum Ba4 str. 657]
 gi|148289952|emb|CAL84065.1| putative guanylate kinase [Clostridium botulinum A str. ATCC 3502]
 gi|152929927|gb|ABS35427.1| guanylate kinase [Clostridium botulinum A str. ATCC 19397]
 gi|152933329|gb|ABS38828.1| guanylate kinase [Clostridium botulinum A str. Hall]
 gi|152934933|gb|ABS40431.1| guanylate kinase [Clostridium botulinum F str. Langeland]
 gi|169120313|gb|ACA44149.1| guanylate kinase [Clostridium botulinum B1 str. Okra]
 gi|226841852|gb|ACO84518.1| guanylate kinase [Clostridium botulinum A2 str. Kyoto]
 gi|229262583|gb|ACQ53616.1| guanylate kinase [Clostridium botulinum Ba4 str. 657]
 gi|295319835|gb|ADG00213.1| guanylate kinase [Clostridium botulinum F str. 230613]
 gi|322806781|emb|CBZ04350.1| guanylate kinase [Clostridium botulinum H04402 065]
          Length = 209

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 46/216 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
             GL I   G  GAGK T     K  L++++  V     TR P          +  L+  
Sbjct: 3   KKGLLIVISGPSGAGKGTIC---KELLKKEDLWVSVSATTRSPRKGEENG-VHYFFLNKD 58

Query: 59  VDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 E +  +  A    ++    ++ +   +  G  ++                    
Sbjct: 59  EFNERIEKDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVI-------------------- 98

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L +D    + V+E  P+   I  LP   +    R+ NR S      +  F          
Sbjct: 99  LEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRF---------- 148

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  + +I         +V+   + +     + +I+
Sbjct: 149 -KAAYKEINYVSKYNYAVVN--DTVEDAVNKVRSII 181


>gi|125543371|gb|EAY89510.1| hypothetical protein OsI_11045 [Oryza sativa Indica Group]
          Length = 765

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARH-VLLSCGVDEFGAEAE 67
           G  GAGKTT I  L   +QR +    V +  EP G    +     V+    +      AE
Sbjct: 149 GASGAGKTTLIDALADRIQRDSLRGAVTLNGEPLGGRMLKVISAYVMQDDLLYPMLTVAE 208

Query: 68  AIVFAA 73
            ++++A
Sbjct: 209 TLMYSA 214


>gi|124505859|ref|XP_001351043.1| UMP-CMP kinase, putative [Plasmodium falciparum 3D7]
 gi|23510686|emb|CAD49071.1| UMP-CMP kinase, putative [Plasmodium falciparum 3D7]
          Length = 371

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 24/86 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T   L++                    A +  R  L  C  +E   +     
Sbjct: 112 GGPGSGKGTQCKLIQEKFDF-----------THISAGDCLREYLKKCEKNEVNTKH---- 156

Query: 71  FAAARLDHVENVIRPALMEGKILLCD 96
                    + ++   +  GKI+  D
Sbjct: 157 ---------QEIVEDCINNGKIVPVD 173


>gi|84687167|ref|ZP_01015048.1| guanylate kinase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664755|gb|EAQ11238.1| guanylate kinase [Rhodobacterales bacterium HTCC2654]
          Length = 213

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 54/172 (31%), Gaps = 29/172 (16%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M   GL I      GAGK+T    L  +     + V   TR P            +   G
Sbjct: 1   MKRRGLLIILSSPSGAGKSTLAHRLMDWDPTLAFSVSATTRTPREGEVDGKDYRFMDETG 60

Query: 59  VDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             +  A+ + ++  A    H     E  +R A+  G  +L D        +QG       
Sbjct: 61  FKKLVADGQ-MLEHAHVFGHFYGSPEAPVRDAIENGCDVLFD------IDWQGAEQIKDS 113

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDYFERK 165
                +  I V            LP  I  LKR   R   R     +  E++
Sbjct: 114 SLSHHVLSIFV------------LPPSIAELKR---RLITRGKDAPETIEKR 150


>gi|77407153|ref|ZP_00784143.1| excinuclease ABC, A subunit [Streptococcus agalactiae H36B]
 gi|77174237|gb|EAO77116.1| excinuclease ABC, A subunit [Streptococcus agalactiae H36B]
          Length = 721

 Score = 36.2 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 413 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 445


>gi|325579071|ref|ZP_08149027.1| ferrichrome ABC superfamily ATP binding cassette transporter, ABC
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325159306|gb|EGC71440.1| ferrichrome ABC superfamily ATP binding cassette transporter, ABC
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 253

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 13/121 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHV-LLSCGVD 60
           +G   SF G  GAGK+T +S++ R L   + ++++  E      +++ A+ + +L    +
Sbjct: 27  TGKITSFIGPNGAGKSTVLSIMSRLLNADSGEIYLNGELLNRKKSSDIAKQLAILKQTNN 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDS 119
                    + A  R             +G +   DR F+D++ AY    D  +H ++D+
Sbjct: 87  INLRLTIEDLVAFGRF---------PYSKGNLTQTDRTFIDNAIAYMNL-DDIRHQYIDN 136

Query: 120 L 120
           L
Sbjct: 137 L 137


>gi|313899072|ref|ZP_07832599.1| putative sodium extrusion ABC transporter, ATP-binding protein
          NatA [Clostridium sp. HGF2]
 gi|312956271|gb|EFR37912.1| putative sodium extrusion ABC transporter, ATP-binding protein
          NatA [Clostridium sp. HGF2]
          Length = 202

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
          ++ G  I   G  G+GK+T + ++   L     +V +  E          
Sbjct: 24 IHRGDLIHITGSNGSGKSTLLKIIAGLLNADKGEVII--ENNDIEIGALI 71


>gi|310822873|ref|YP_003955231.1| signal recognition particle protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395945|gb|ADO73404.1| Signal recognition particle protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 544

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 51/159 (32%), Gaps = 29/159 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA----EAARHVLLSCGVDEFG--- 63
           G++G+GKTT    L   L ++     +       PAA    +     L      E G   
Sbjct: 118 GLQGSGKTTTTGKLANRLLQEGRKPLLVAADIYRPAAVDQLKVLGERLKVPVYFEPGVAP 177

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            E     +AAAR             +  ++L D            R +     +  L+ I
Sbjct: 178 PELAVRGYAAAREQ-----------KCDVVLID---------TAGRLAIDESLMAELESI 217

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
               V PD  I+L     IG   V+          LD F
Sbjct: 218 -KGNVHPD-NILLVCDAMIGQDAVRTAAEFDRRLTLDGF 254


>gi|295098576|emb|CBK87666.1| thiamine ABC transporter, ATP-binding protein [Enterobacter
          cloacae subsp. cloacae NCTC 9394]
          Length = 232

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          I+  G  GAGK+T ++L+  FLQ      V    E    P A+    +L     
Sbjct: 28 IAVLGPSGAGKSTLLNLIAGFLQPASGSIVINNGEYTYAPPAKRPVSMLFQENN 81


>gi|261868424|ref|YP_003256346.1| putrescine/spermidine ABC transporter ATPase protein
          [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413756|gb|ACX83127.1| putrescine/spermidine ABC transporter ATPase protein
          [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 372

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLLA 57


>gi|320011386|gb|ADW06236.1| dephospho-CoA kinase [Streptomyces flavogriseus ATCC 33331]
          Length = 200

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 76/216 (35%), Gaps = 35/216 (16%)

Query: 11  GIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           GI GAGK+    LL R+        R   +V     PG T   EA    +L+        
Sbjct: 9   GI-GAGKSEVSRLLARYGAVVIDADRIAREVVEPGTPGLTAVVEAFGPGILTQDGSLNRP 67

Query: 65  EAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +IVF+  ARL  + N++ P +         R   S         +     +  L E 
Sbjct: 68  ALGSIVFSDPARLATLNNIVHPLVGA-------RS--SELERAAAAGAVVVHDVPLLTE- 117

Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
               + P  D  +++D    I L R+     + ES      +       +  R+  L +A
Sbjct: 118 --NGLAPLYDLVVVVDAKPAIQLDRLVRLRGMTESDARARMDA------QATREQRLAVA 169

Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217
                   ++D+    + + + +   VW  +  R +
Sbjct: 170 D------LVIDNDGPLEDLESQVRT-VWSDLAARAA 198


>gi|255015433|ref|ZP_05287559.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 2_1_7]
          Length = 462

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 RKGEFVTILGPSGCGKTTLLRLIA 56


>gi|254784500|ref|YP_003071928.1| signal recognition particle-docking protein FtsY [Teredinibacter
           turnerae T7901]
 gi|242667494|gb|ACS93531.1| signal recognition particle-docking protein FtsY [Teredinibacter
           turnerae T7901]
          Length = 334

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 138 GVNGVGKTTTIGKLAKRFQNQGKSVMLAA--GDTFRAAAVEQLQVWGERNKVPVVAQH-- 193

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A      +++ D
Sbjct: 194 TGADSASVIYDAVQSAQARQIDVVIAD 220


>gi|229017272|ref|ZP_04174177.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH1273]
 gi|229023445|ref|ZP_04179945.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH1272]
 gi|229059631|ref|ZP_04197009.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH603]
 gi|229166838|ref|ZP_04294586.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH621]
 gi|228616641|gb|EEK73718.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH621]
 gi|228719644|gb|EEL71243.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH603]
 gi|228737855|gb|EEL88351.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH1272]
 gi|228744025|gb|EEL94122.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH1273]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITNLSISDRTR 78


>gi|237653178|ref|YP_002889492.1| hypothetical protein Tmz1t_2513 [Thauera sp. MZ1T]
 gi|237624425|gb|ACR01115.1| protein of unknown function DUF344 [Thauera sp. MZ1T]
          Length = 405

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 42/158 (26%), Gaps = 45/158 (28%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 182 ILFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPSELERGQW----------------- 224

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               +    + H+          G+I+L DR   S Y   G          D   E   Q
Sbjct: 225 ----YFQRYIQHLPT-------AGEIVLFDR---SWYNRAGVERVMGFCTPDEYNEFMRQ 270

Query: 127 EVMP----DCT--------IILDLPVDIGLKRVQNRYS 152
             +P    +              +  +   +R + R S
Sbjct: 271 --VPEFERNLVRSGIHLIKFWFSVSREEQRRRFKERES 306


>gi|218547733|ref|YP_002381524.1| adenylylsulfate kinase [Escherichia fergusonii ATCC 35469]
 gi|226722293|sp|B7LWK5|CYSC_ESCF3 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|218355274|emb|CAQ87881.1| adenosine 5'-phosphosulfate kinase [Escherichia fergusonii ATCC
           35469]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|218261099|ref|ZP_03476052.1| hypothetical protein PRABACTJOHN_01716 [Parabacteroides johnsonii
          DSM 18315]
 gi|218224223|gb|EEC96873.1| hypothetical protein PRABACTJOHN_01716 [Parabacteroides johnsonii
          DSM 18315]
          Length = 468

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|218201736|gb|EEC84163.1| hypothetical protein OsI_30538 [Oryza sativa Indica Group]
          Length = 663

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 5/97 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGV 59
           MN    IS  G  G GKTT    +    +   +D       G  P  +   R +L+    
Sbjct: 157 MNKPKVISIFGFGGLGKTTLAKAVYNKFK-PGFDSGAFVPIGQHPDMKKVLRDILIDLDK 215

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
             +      ++        +  +      +   ++ D
Sbjct: 216 QRYMHSIMMLL---DERQLMNELQEFIQKKRCFIIID 249


>gi|170758261|ref|YP_001787761.1| signal recognition particle protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169405250|gb|ACA53661.1| signal recognition particle protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 449

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L   L+++N    +       PAA     V+   +   V   G +  
Sbjct: 108 GLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLN 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  + A ++H +N       +  +++ D            R       +D L  I
Sbjct: 168 PVDISKAAIEHAKN------NKNNVVIID---------TAGRLHIDEELMDELHNI 208


>gi|169826763|ref|YP_001696921.1| excinuclease ABC subunit A [Lysinibacillus sphaericus C3-41]
 gi|168991251|gb|ACA38791.1| UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
           [Lysinibacillus sphaericus C3-41]
          Length = 955

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           GLF++  G+ G+GK+T I       L + L R        +E  G    E    +
Sbjct: 632 GLFVAVTGVSGSGKSTLINEILYKSLAQKLNRSKVKPGEHKEVTGMDELEKVIDI 686


>gi|167945835|ref|ZP_02532909.1| signal recognition particle-docking protein FtsY [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 227

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L R L+ +  +V +
Sbjct: 132 GINGAGKTTTIGKLTRRLKHEGQEVML 158


>gi|168010875|ref|XP_001758129.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690585|gb|EDQ76951.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 321

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARH 52
           I  +G  G+GK+  +++L ++ + + + V       G T  +   R+
Sbjct: 55  ILLDGPTGSGKSVALAMLVQWARARGWLVFYIPSGKGWTHGSLYYRN 101


>gi|150008279|ref|YP_001303022.1| spermidine/putrescine transport ATP-binding protein
          [Parabacteroides distasonis ATCC 8503]
 gi|256839435|ref|ZP_05544944.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Parabacteroides sp. D13]
 gi|301309218|ref|ZP_07215162.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. 20_3]
 gi|149936703|gb|ABR43400.1| spermidine/putrescine transport ATP-binding protein
          [Parabacteroides distasonis ATCC 8503]
 gi|256738365|gb|EEU51690.1| 2-aminoethylphosphonate ABC transport system, ATP-binding
          component PhnT [Parabacteroides sp. D13]
 gi|300832900|gb|EFK63526.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. 20_3]
          Length = 462

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 RKGEFVTILGPSGCGKTTLLRLIA 56


>gi|119871921|ref|YP_929928.1| ATPase [Pyrobaculum islandicum DSM 4184]
 gi|119673329|gb|ABL87585.1| type II secretion system protein E [Pyrobaculum islandicum DSM
           4184]
          Length = 520

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 2/50 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ I+  G  GAGKTT    L  F   K   V     P     + A   +
Sbjct: 261 GILIA--GAPGAGKTTFAQALAEFYLSKGKIVKTLESPRDMTLSPAITQI 308


>gi|75538975|sp|O85818|POTA_AGGAC RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|3341854|gb|AAC27495.1| PotA [Aggregatibacter actinomycetemcomitans]
          Length = 372

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + LL 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLLA 57


>gi|120536854|ref|YP_956912.1| phosphonate C-P lyase system protein PhnL [Marinobacter aquaeolei
           VT8]
 gi|120326688|gb|ABM20997.1| phosphonate C-P lyase system protein PhnL [Marinobacter aquaeolei
           VT8]
          Length = 236

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G   +  G  G+GK++ +  + + +L      ++  +E   T  A+A+ + +L     + 
Sbjct: 36  GQLTALTGPTGSGKSSVLKCIFRTYLPSSGRILYRDQEDKVTDLAQASEYRILQLRRRDI 95

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEG 90
           G   +  +    R   ++  I P L  G
Sbjct: 96  GFVTQ-FLHCLPRKSALDITIEPLLARG 122


>gi|324111383|gb|EGC05365.1| adenylylsulfate kinase [Escherichia fergusonii B253]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|320202401|gb|EFW76971.1| Adenylylsulfate kinase [Escherichia coli EC4100B]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|317968133|ref|ZP_07969523.1| adenylylsulfate kinase [Synechococcus sp. CB0205]
          Length = 213

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L  +    +                 +L       G   + 
Sbjct: 44  FTGLSGSGKSTLANAVNQALFERGLACY-----------------VLDGDNIRHGLCKDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  L  G ++L 
Sbjct: 87  GFSDADREENIRRIGEVSKLFLDAGVVVLT 116


>gi|315918175|ref|ZP_07914415.1| urease accessory protein ureG [Fusobacterium gonidiaformans ATCC
          25563]
 gi|317059831|ref|ZP_07924316.1| urease accessory protein ureG [Fusobacterium sp. 3_1_5R]
 gi|313685507|gb|EFS22342.1| urease accessory protein ureG [Fusobacterium sp. 3_1_5R]
 gi|313692050|gb|EFS28885.1| urease accessory protein ureG [Fusobacterium gonidiaformans ATCC
          25563]
          Length = 239

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           FI+  G   +GKT+ I      L++K   V V + 
Sbjct: 11 KFITISGPPSSGKTSLILKTIENLKQKGMKVGVVKF 46


>gi|307692988|ref|ZP_07635225.1| polyphosphate:AMP phosphotransferase [Ruminococcaceae bacterium
           D16]
          Length = 489

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 65/228 (28%), Gaps = 54/228 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I++EG + AGK  +I  L   L  + Y+V  T  P      E  RH L            
Sbjct: 297 IAYEGWDAAGKGGNIKRLASALDPRGYEVVPTASPTPD---EKHRHYL------------ 341

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL----DSLQE 122
                            R     G I + DR        +               D + E
Sbjct: 342 -------------WRFWRKLPKTGHIAIFDRSWYGRVMVERLEGFCTIEDWQRAYDEINE 388

Query: 123 ISVQEVMPDCT--------IILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIH 170
              +      T          + +  D  L+R Q R +  E        D+  R+    +
Sbjct: 389 FERE-----LTDAGAVVLKFWVQIDKDTQLQRFQARENTPEKRWKITDEDWRNREKWDAY 443

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI--LNIVWELVQKRV 216
           +      L     +    HI+    S       I  + IV   +++ +
Sbjct: 444 QVAVNEMLARTNTENAPWHIL---ESVDKRYARIKAMKIVIHALEQAL 488


>gi|262384606|ref|ZP_06077740.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 2_1_33B]
 gi|262293899|gb|EEY81833.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 2_1_33B]
          Length = 462

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 RKGEFVTILGPSGCGKTTLLRLIA 56


>gi|257463932|ref|ZP_05628317.1| urease accessory protein ureG [Fusobacterium sp. D12]
 gi|317061458|ref|ZP_07925943.1| urease accessory protein ureG [Fusobacterium sp. D12]
 gi|313687134|gb|EFS23969.1| urease accessory protein ureG [Fusobacterium sp. D12]
          Length = 230

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           FI+  G   +GKT+ I      L++K   V V + 
Sbjct: 2  KFITISGPPSSGKTSLILKTIENLKQKGMKVGVVKF 37


>gi|257453299|ref|ZP_05618598.1| urease accessory protein ureG [Fusobacterium sp. 3_1_5R]
 gi|257467038|ref|ZP_05631349.1| urease accessory protein ureG [Fusobacterium gonidiaformans ATCC
          25563]
          Length = 230

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           FI+  G   +GKT+ I      L++K   V V + 
Sbjct: 2  KFITISGPPSSGKTSLILKTIENLKQKGMKVGVVKF 37


>gi|221042044|dbj|BAH12699.1| unnamed protein product [Homo sapiens]
          Length = 159

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 25/76 (32%), Gaps = 17/76 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPA 86
               R ++V  +   A
Sbjct: 105 ---DREENVRRIAEVA 117


>gi|217076820|ref|YP_002334536.1| high-affinity zinc uptake system ATP-binding protein ZnuC
          [Thermosipho africanus TCF52B]
 gi|217036673|gb|ACJ75195.1| high-affinity zinc uptake system ATP-binding protein ZnuC
          [Thermosipho africanus TCF52B]
          Length = 242

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          M  G F+   G  GAGK+T I +L
Sbjct: 30 MKKGEFVGIVGPNGAGKSTLIKIL 53


>gi|295131040|ref|YP_003581703.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           SK137]
 gi|291376747|gb|ADE00602.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           SK137]
 gi|314976689|gb|EFT20784.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL045PA1]
 gi|314984327|gb|EFT28419.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL005PA1]
 gi|327328396|gb|EGE70158.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL096PA2]
 gi|327444183|gb|EGE90837.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL043PA2]
 gi|328760054|gb|EGF73634.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL099PA1]
          Length = 267

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V   RE  G         +    S     
Sbjct: 44  GPNGAGKTTMLAVLTGIKRPRAGMLRRDGQPVRRRREGSGYRAHIGYVPQECTWSPSWP- 102

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D  +   +A+Q     S         
Sbjct: 103 ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSDLNV-GQFAHQPIGTLSGGQKRRVFL 155

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 156 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 192


>gi|254420871|ref|ZP_05034595.1| Phosphoribulokinase / Uridine kinase family [Brevundimonas sp.
           BAL3]
 gi|196187048|gb|EDX82024.1| Phosphoribulokinase / Uridine kinase family [Brevundimonas sp.
           BAL3]
          Length = 215

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 56/206 (27%), Gaps = 35/206 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G+GK+T    L   L        + RE      A +            F A 
Sbjct: 4   LIAITGGSGSGKSTLAEALVSALPEG--KAVLVREDSYYRDAASL---------PGFDAA 52

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                  AAR   +       L  G+ +         Y++           + + + + V
Sbjct: 53  TFDFDDVAARDHALMIADLMDLKAGRPV-----TAPVYSFIHHGREPGGEPIPASEVVIV 107

Query: 126 QEV----MPDCTIILDL------PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
           +       P+ T + D+      P DI   R   R         D             R 
Sbjct: 108 EGTHVLCTPELTALFDIRVFVDTPSDIRFIRRLLRDQSERGRSAD---SVVAQYLATVRP 164

Query: 176 IFLDIARNQPDR----CHIVDSAHSF 197
               +   +P R      I D+  + 
Sbjct: 165 GHERL--TEPSRTHADFIIADATAAV 188


>gi|196016166|ref|XP_002117937.1| hypothetical protein TRIADDRAFT_33282 [Trichoplax adhaerens]
 gi|190579510|gb|EDV19604.1| hypothetical protein TRIADDRAFT_33282 [Trichoplax adhaerens]
          Length = 614

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I+F G+ G GK+T+++ +  +L    Y V +
Sbjct: 398 ITFCGVNGVGKSTNLAKICFWLMENGYRVLI 428


>gi|217976746|ref|YP_002360893.1| adenylate kinase [Methylocella silvestris BL2]
 gi|254806996|sp|B8ELE2|KAD_METSB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|217502122|gb|ACK49531.1| adenylate kinase [Methylocella silvestris BL2]
          Length = 193

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 66/213 (30%), Gaps = 37/213 (17%)

Query: 8   SFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            F G  GAGK T  + L++     Q    D+       GTP    A+ ++ + G      
Sbjct: 4   VFLGPPGAGKGTQSTRLQQKFNIPQLSTGDMLRAAVKAGTPVGLKAKAIMDAGG---LVP 60

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   +   A R+D       P   EG   + D F          R   Q   L  +  + 
Sbjct: 61  DEVVVGIIADRID------EPDAKEGF--ILDGF---------PRTVKQAEALADI--LI 101

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + +  D  I L +     L R++NR             +       ++  + +   A+ 
Sbjct: 102 KKNMKLDAVIELKVDDKALLARIENRAQESLAKGETIRADDNPEAFKKRL-ESYH--AQT 158

Query: 184 QP--------DRCHIVDSAHSFQSVATNILNIV 208
            P             VD       V+  I   +
Sbjct: 159 APVSAFYAGKGALKAVDGMAPIDDVSAAIEKAL 191


>gi|170766121|ref|ZP_02900932.1| adenylylsulfate kinase [Escherichia albertii TW07627]
 gi|170125267|gb|EDS94198.1| adenylylsulfate kinase [Escherichia albertii TW07627]
          Length = 202

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 34  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 76

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 77  GFSDADRKENIRRVGEVANLMVEAGLVVLT 106


>gi|154483576|ref|ZP_02026024.1| hypothetical protein EUBVEN_01280 [Eubacterium ventriosum ATCC
           27560]
 gi|149735486|gb|EDM51372.1| hypothetical protein EUBVEN_01280 [Eubacterium ventriosum ATCC
           27560]
          Length = 452

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 22/118 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-----FGAE 65
           G++GAGKTT  + +   L+ K     +       PAA     + ++    +      G +
Sbjct: 111 GLQGAGKTTTTAKIAGKLKAKGKRPLLVACDVYRPAA--IEQLKINGEKQQVPVFSMGDK 168

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + +  A A ++H +           +++ D            R       ++ L EI
Sbjct: 169 QKPLNIAKAAIEHAKK------NNNNVVILD---------TAGRLHVDEDMMNELVEI 211


>gi|139438404|ref|ZP_01771920.1| Hypothetical protein COLAER_00910 [Collinsella aerofaciens ATCC
           25986]
 gi|133775943|gb|EBA39763.1| Hypothetical protein COLAER_00910 [Collinsella aerofaciens ATCC
           25986]
          Length = 618

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 7/36 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-------LQRKNYDV 35
           I+  G  GAGKTT I LL+RF       L+ +  DV
Sbjct: 407 IAIVGPTGAGKTTLIKLLQRFYDVDGGSLRVEGVDV 442


>gi|120612298|ref|YP_971976.1| ABC transporter-like protein [Acidovorax citrulli AAC00-1]
 gi|120590762|gb|ABM34202.1| carbohydrate ABC transporter ATP-binding protein, CUT1 family
           [Acidovorax citrulli AAC00-1]
          Length = 338

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC 57
           G FI   G  G GK+T + ++    +           V    EP     A   ++  L  
Sbjct: 33  GEFIVIVGPSGCGKSTLLRMVAGLEEISGGEIAIGNRVVNDLEPAQRDIAMVFQNYALYP 92

Query: 58  GVDEFGAEAEAI 69
            +  F   A  +
Sbjct: 93  HMTNFENMAYGL 104


>gi|126178538|ref|YP_001046503.1| adenylate kinase [Methanoculleus marisnigri JR1]
 gi|166219973|sp|A3CT21|KADA_METMJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|125861332|gb|ABN56521.1| Adenylate kinase [Methanoculleus marisnigri JR1]
          Length = 192

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 16/162 (9%)

Query: 17  KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARL 76
           KTT I+     L  +   V       GT   E A+   L+   DE     +       RL
Sbjct: 16  KTTVINGAMERLATEG--VAYKAVNFGTFMFEVAKKENLASDRDEMRKLEKD---VQKRL 70

Query: 77  DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIIL 136
                    A+     ++ D    S+         +   FL  L E  ++E+MPD  +++
Sbjct: 71  QQAAATGIAAMSGEANIIID--THSTV-------KTPTGFLAGLPEWVLRELMPDIVVLV 121

Query: 137 DLPVD-IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +   D I ++R+ +    R+         +    +      +
Sbjct: 122 ETDPDQILMRRLGDASRARDMEGY-RAIAEHQEFNRAVSAAY 162


>gi|94264765|ref|ZP_01288544.1| Cytidylate kinase [delta proteobacterium MLMS-1]
 gi|93454811|gb|EAT05064.1| Cytidylate kinase [delta proteobacterium MLMS-1]
          Length = 248

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          ++ +G  G GK+T   LL   L     D
Sbjct: 16 VTIDGPSGVGKSTVSRLLAERLAATYLD 43


>gi|56551966|ref|YP_162805.1| signal recognition particle-docking protein FtsY [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|241761948|ref|ZP_04760033.1| signal recognition particle-docking protein FtsY [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|260752487|ref|YP_003225380.1| signal recognition particle-docking protein FtsY [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|56543540|gb|AAV89694.1| signal recognition particle-docking protein FtsY [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|241373628|gb|EER63200.1| signal recognition particle-docking protein FtsY [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|258551850|gb|ACV74796.1| signal recognition particle-docking protein FtsY [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
          Length = 310

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G+ G+GKTT I+ L  + Q  +Y+V + 
Sbjct: 112 GVNGSGKTTTIAKLAHWFQELDYEVMLV 139


>gi|84498056|ref|ZP_00996853.1| ATP binding protein of ABC transporter-like protein [Janibacter
          sp. HTCC2649]
 gi|84381556|gb|EAP97439.1| ATP binding protein of ABC transporter-like protein [Janibacter
          sp. HTCC2649]
          Length = 354

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G FI+  G  G GKTT +  L 
Sbjct: 37 MEPGEFIALLGPSGCGKTTALRCLA 61


>gi|322375712|ref|ZP_08050224.1| ABC transporter, ATP-binding protein [Streptococcus sp. C300]
 gi|321279420|gb|EFX56461.1| ABC transporter, ATP-binding protein [Streptococcus sp. C300]
          Length = 231

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 12/89 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL----- 54
           +++G  +   G  G+GKTT I L+   LQ  K   +   ++P  +PA +A    L     
Sbjct: 26  ISAGKIVGLLGPNGSGKTTLIKLINGLLQPDKGRVLINGQDP--SPATKAIVSYLPDTTY 83

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDHV 79
           L+  +    A      F       R  H+
Sbjct: 84  LNEEMKVKDALTYFKTFYQDFNLERAQHL 112


>gi|317495119|ref|ZP_07953489.1| type II/IV secretion system protein [Gemella moribillum M424]
 gi|316914541|gb|EFV36017.1| type II/IV secretion system protein [Gemella moribillum M424]
          Length = 330

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 16/36 (44%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
            I F G  G+GK+T +  L   L   +  V    +P
Sbjct: 140 LILFSGPTGSGKSTSMYKLASSLANMDKQVITVEDP 175


>gi|317508405|ref|ZP_07966075.1| signal recognition particle protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253252|gb|EFV12652.1| signal recognition particle protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 515

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++L+ + +
Sbjct: 107 GLQGAGKTTLAGKLAKWLKHQGH 129


>gi|331681487|ref|ZP_08382124.1| dephospho-CoA kinase [Escherichia coli H299]
 gi|331081708|gb|EGI52869.1| dephospho-CoA kinase [Escherichia coli H299]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|294496608|ref|YP_003543101.1| ABC transporter [Methanohalophilus mahii DSM 5219]
 gi|292667607|gb|ADE37456.1| ABC transporter related protein [Methanohalophilus mahii DSM 5219]
          Length = 572

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           G  G+GKTT + +L   L+ ++  V  + E      +
Sbjct: 300 GPSGSGKTTLLRMLAGLLEPQSGRVLYSLEDNWVDIS 336


>gi|256825686|ref|YP_003149646.1| adenylylsulfate kinase ApsK [Kytococcus sedentarius DSM 20547]
 gi|256689079|gb|ACV06881.1| adenylylsulfate kinase ApsK [Kytococcus sedentarius DSM 20547]
          Length = 376

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 32/96 (33%), Gaps = 19/96 (19%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I F G+ G+GK+T    L+  L  +                     VLL   V   
Sbjct: 195 QGAVILFSGLSGSGKSTLARRLRDRLIEETQRSV----------------VLLDGDVVRR 238

Query: 63  GAEAEAIVFAAARLDHVENVIRPALM---EGKILLC 95
              A      A R  +V+ +   A     EG I +C
Sbjct: 239 HLSAGLGFSPADREVNVKRIGWVAAQIAGEGAIAIC 274


>gi|253570632|ref|ZP_04848040.1| guanylate kinase [Bacteroides sp. 1_1_6]
 gi|298385124|ref|ZP_06994683.1| guanylate kinase [Bacteroides sp. 1_1_14]
 gi|251839581|gb|EES67664.1| guanylate kinase [Bacteroides sp. 1_1_6]
 gi|298262268|gb|EFI05133.1| guanylate kinase [Bacteroides sp. 1_1_14]
          Length = 189

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G  I F    G+GK+T I+ L        + +  T  P          +  L+      
Sbjct: 2   TGKLIIFSAPSGSGKSTIINYLLTQNLNLAFSISATSRPPRGTEKHGVEYFFLTPEEFRC 61

Query: 63  GAEAEAIV----FAAARLD-HVENVIRPALMEGKILLCD 96
             E    +        R    ++  +   L +G+ ++ D
Sbjct: 62  RIENNEFLEYEEVYKDRYYGTLKEQVEKQLEKGQNVVFD 100


>gi|269792626|ref|YP_003317530.1| signal recognition particle-docking protein FtsY [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100261|gb|ACZ19248.1| signal recognition particle-docking protein FtsY [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 309

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            I   G+ G+GKTT  + L + L+ +  +V +
Sbjct: 107 LILLIGVNGSGKTTTAAKLAKLLKGQGNNVVL 138


>gi|227872689|ref|ZP_03991019.1| guanylate kinase [Oribacterium sinus F0268]
 gi|227841503|gb|EEJ51803.1| guanylate kinase [Oribacterium sinus F0268]
          Length = 216

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 75/228 (32%), Gaps = 42/228 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            G+ +   G  GAGK T +  L R        +   TR          +   +     +E
Sbjct: 7   KGILVVVSGFSGAGKGTIMKNLTRKYDNYALSISATTRAARPGEEEGKSYFFVSKDRFEE 66

Query: 62  FGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                E + +A    ++       +   L EGK ++ +         QG           
Sbjct: 67  MIDRDELVEYAKYVDNYYGTPRKFVEDCLNEGKDVILE------IEIQGA---------- 110

Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF-----ERKDVMIHE 171
               + +++  PD  +I   P   +    R+  R +  E+           E + V  ++
Sbjct: 111 ----LKIKKKFPDSLLIFMAPPSAEELRARLIGRNTEDEATVNKRLSRAIVEAEGVEAYD 166

Query: 172 KRRQIFLDIARNQPDRCH-----IVDSAHSFQSVATNILNIVWELVQK 214
                ++ +     D C      ++ ++H    V  +++  + + +++
Sbjct: 167 -----YI-LVNADIDTCTEKLHNLIRASHDRAEVHLDLIEEIRKDLRR 208


>gi|226356348|ref|YP_002786088.1| adenylylsulfate kinase [Deinococcus deserti VCD115]
 gi|259586087|sp|C1CVW7|CYSC_DEIDV RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
          AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|226318338|gb|ACO46334.1| putative Adenylylsulfate kinase (APS kinase) (Adenosine 5
          -phosphosulfate kinase) [Deinococcus deserti VCD115]
          Length = 181

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          +G  + F G+ GAGK+T  S L   L  +   V
Sbjct: 12 TGRVVWFTGLSGAGKSTLASALYEELIARGEQV 44


>gi|187778190|ref|ZP_02994663.1| hypothetical protein CLOSPO_01782 [Clostridium sporogenes ATCC
           15579]
 gi|187775118|gb|EDU38920.1| hypothetical protein CLOSPO_01782 [Clostridium sporogenes ATCC
           15579]
          Length = 571

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           M  G   +  G  G+GK+T + L+ RF   +   V + +E 
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKEN 396


>gi|169630318|ref|YP_001703967.1| Signal recognition particle protein Ffh [Mycobacterium abscessus
           ATCC 19977]
 gi|169242285|emb|CAM63313.1| Signal recognition particle protein Ffh [Mycobacterium abscessus]
          Length = 523

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++GAGKTT    L ++L+ + + 
Sbjct: 107 GLQGAGKTTLAGKLAKWLKGQGHT 130


>gi|159466744|ref|XP_001691558.1| ARF/Sar1-like GTPase [Chlamydomonas reinhardtii]
 gi|158278904|gb|EDP04666.1| ARF/Sar1-like GTPase [Chlamydomonas reinhardtii]
          Length = 289

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)

Query: 7  ISFEGIEGAGKTTHISLL---KRFLQRKN 32
          I F G++GAGKTT I+ L    R L+ + 
Sbjct: 30 ILFVGLDGAGKTTIINTLLEEARRLKDRG 58


>gi|153008201|ref|YP_001369416.1| ABC transporter-like protein [Ochrobactrum anthropi ATCC 49188]
 gi|151560089|gb|ABS13587.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
          Length = 264

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAAR 51
          M+ G F++  G  GAGK+T + +L    +      V     VTR+P    A   AR
Sbjct: 29 MDQGSFVTVIGSNGAGKSTMLGVLAGDVIPTAGKVVISGKDVTRKPTAERAGLVAR 84


>gi|126652448|ref|ZP_01724620.1| excinuclease ABC subunit A [Bacillus sp. B14905]
 gi|126590719|gb|EAZ84834.1| excinuclease ABC subunit A [Bacillus sp. B14905]
          Length = 955

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           GLF++  G+ G+GK+T I       L + L R        +E  G    E    +
Sbjct: 632 GLFVAVTGVSGSGKSTLINEILYKSLAQKLNRSKVKPGEHKEVTGMDELEKVIDI 686


>gi|115485027|ref|NP_001067657.1| Os11g0265000 [Oryza sativa Japonica Group]
 gi|62733975|gb|AAX96084.1| uridine kinase, putative [Oryza sativa Japonica Group]
 gi|77549696|gb|ABA92493.1| uridine kinase family protein, expressed [Oryza sativa Japonica
           Group]
 gi|113644879|dbj|BAF28020.1| Os11g0265000 [Oryza sativa Japonica Group]
          Length = 491

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA---EAEAIVF 71
           +GK+T   ++   L+ +   V VT+E        +   ++     +       + E ++ 
Sbjct: 64  SGKSTVCKMIIDQLRDQ-RVVVVTQE--SFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 120

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISVQEV 128
               L H + V  P                S A   + + S  + L+ +    +  V+++
Sbjct: 121 CMENLKHGKAVDIPNYNFK--------TYKSVASARKVNPSDVIILEGILVFHDSRVRDL 172

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           M +  I +D   D+ L R   R ++ +   +
Sbjct: 173 M-NMKIFVDTDADVRLTRRIRRDTIEKGRDI 202


>gi|54020476|ref|YP_115873.1| hypothetical protein mhp362 [Mycoplasma hyopneumoniae 232]
 gi|53987649|gb|AAV27850.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
 gi|312601325|gb|ADQ90580.1| Putative uncharacterized protein [Mycoplasma hyopneumoniae 168]
          Length = 446

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 13/86 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTRE---------PGGTPAAEAARHVLLSCGVDEFGA 64
           G+GKTT +  +++F     Y V  T E                +  R   ++  +     
Sbjct: 275 GSGKTTFLKKVEKF----GYSVLYTDEFFHNCYLASGECFKIIKKIRPDFINENIVNKNK 330

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG 90
               ++ +    D +E  I P L   
Sbjct: 331 IRNFMLKSKQNRDLIEKSIYPFLENH 356


>gi|15887420|ref|NP_353101.1| putative fructose transport system kinase [Agrobacterium
           tumefaciens str. C58]
 gi|15154931|gb|AAK85886.1| putative kinase [Agrobacterium tumefaciens str. C58]
          Length = 209

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 67/216 (31%), Gaps = 42/216 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVL-LSCGVDE 61
             I+  G  GAGK+T    L   L+ +     V    G          R +L      + 
Sbjct: 22  FIIAIAGPPGAGKSTLADALCDALRARGETAAVLPMDGFHMDNGILEERGLLSRKGAPET 81

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLC---DRFLDSSYAYQGERDSSQHLFLD 118
           F       + +A R              G+ +L    DR  + + A          L L 
Sbjct: 82  FDVRGFLDIVSAVR------------EGGQEVLVPVFDRSREIAIASARAIAPDTRLILA 129

Query: 119 SLQEISVQEVMP--------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
               + + E  P        D TI +   V +  +R++NR+                 IH
Sbjct: 130 EGNYLLLNE-APWTVLSGSFDLTIFVGPSVAVLEERLRNRWQGYGLNA--------AQIH 180

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206
            K  +  L      P+   ++++A     +  +I  
Sbjct: 181 AKLFENDL------PNGKRVIENARPAD-IHIDIWE 209


>gi|77362290|ref|YP_341864.1| kinase domain-containing protein [Pseudoalteromonas haloplanktis
          TAC125]
 gi|76877201|emb|CAI89418.1| putative protein with predicted kinase domain [Pseudoalteromonas
          haloplanktis TAC125]
          Length = 290

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRK 31
          N+ LF++  G +G+GKTT    L  +L + 
Sbjct: 38 NTPLFVAINGSQGSGKTTLADFLVTWLAKN 67


>gi|54023314|ref|YP_117556.1| hypothetical protein nfa13470 [Nocardia farcinica IFM 10152]
 gi|54014822|dbj|BAD56192.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 317

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 31/159 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + F G+ GAGK+T +  L              R P G   +     +      +      
Sbjct: 126 VVFSGVPGAGKSTALRKL------FGSTADHRRPPRGPAGSVVLDSL---HARNRLTPRL 176

Query: 67  EAIVFAAAR-LDHVENV--IRPAL--MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             + +   R + H+ +   IR AL   +G +++ D     ++A+              + 
Sbjct: 177 RMLPYPLWRPVVHLAHYTAIRRALRTADGPVIIHD---CGTFAWSR----------RLIA 223

Query: 122 EISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACL 159
             +      D   +++D+P  +   R       R S  L
Sbjct: 224 RWTAAAGR-DLHVVMIDVPPTVA--RAGQYARGRRSNGL 259


>gi|33592408|ref|NP_880052.1| glycerol-3-phosphate transporter ATP-binding subunit [Bordetella
           pertussis Tohama I]
 gi|81836324|sp|Q7VYN2|UGPC_BORPE RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
           UgpC
 gi|33572053|emb|CAE41580.1| sn-glycerol-3-phosphate transport ATP-binding protein [Bordetella
           pertussis Tohama I]
          Length = 362

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 10/74 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLK--------RFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
           G FI   G  G GK+T + ++           L      V  T EP     A   ++  L
Sbjct: 30  GEFIVIVGPSGCGKSTLMRMVAGLETVTEGEILIDD--KVVNTLEPAERDIAMVFQNYAL 87

Query: 56  SCGVDEFGAEAEAI 69
              +  F   A  +
Sbjct: 88  YPHMSVFDNMAYGL 101


>gi|90423871|ref|YP_532241.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
 gi|90105885|gb|ABD87922.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
          Length = 575

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + L+   L+
Sbjct: 39 GPDGAGKTTLMRLIAALLE 57


>gi|91975111|ref|YP_567770.1| ABC transporter related [Rhodopseudomonas palustris BisB5]
 gi|91681567|gb|ABE37869.1| ABC transporter related [Rhodopseudomonas palustris BisB5]
          Length = 260

 Score = 36.2 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          +  G  ++  G  GAGKTT +  L   ++ + 
Sbjct: 29 LTRGHLVALVGPNGAGKTTLLRALAGLIESRG 60


>gi|330507600|ref|YP_004384028.1| PIN domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928408|gb|AEB68210.1| PIN domain protein [Methanosaeta concilii GP-6]
          Length = 605

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43
             G+ I+  G  G+GK+T  + L  +L   NY V     P  
Sbjct: 262 QRGILIA--GPPGSGKSTFAAGLAEYLLDCNYVVKTLESPRD 301


>gi|323975733|gb|EGB70829.1| dephospho-CoA kinase [Escherichia coli TW10509]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|317402090|gb|EFV82683.1| BauE protein [Achromobacter xylosoxidans C54]
          Length = 258

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHV 53
          G  GAGK+T + L+ R L+    ++ +  +P      AE AR V
Sbjct: 34 GPNGAGKSTLLMLMARLLEPSGGEILLDGQPVTNLRIAEYARRV 77


>gi|308463453|ref|XP_003094000.1| hypothetical protein CRE_16389 [Caenorhabditis remanei]
 gi|308248663|gb|EFO92615.1| hypothetical protein CRE_16389 [Caenorhabditis remanei]
          Length = 302

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 15/82 (18%)

Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
          +GK+T +  L    + K  +  + R           R         E    +        
Sbjct: 12 SGKSTIVDRLAERFKEKGKEYQIIR---DESYGGFDRKNY-EFANKEKDLRSW------- 60

Query: 75 RLDHVENVIRPALMEGKILLCD 96
              + + ++ +L + K+++CD
Sbjct: 61 ----IRSEVQQSLTKNKVIICD 78


>gi|300023597|ref|YP_003756208.1| LAO/AO transporter ATPase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525418|gb|ADJ23887.1| LAO/AO transport system ATPase [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 324

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAAR 51
           F G  GAGK+T ++ +   L+++   V  +  +P     GG    +  R
Sbjct: 67  FTGPPGAGKSTLVNAIIAQLRQQGRTVGVIAVDPSSPVSGGAILGDRIR 115


>gi|296185621|ref|ZP_06854030.1| ABC transporter, ATP-binding protein [Clostridium carboxidivorans
          P7]
 gi|296049749|gb|EFG89174.1| ABC transporter, ATP-binding protein [Clostridium carboxidivorans
          P7]
          Length = 263

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
             F S  G  G+GKTT +  L + L+ +   + +
Sbjct: 33 KNKFYSILGPNGSGKTTLLKKLGKTLESEKKTIFI 67


>gi|291455167|ref|ZP_06594557.1| ABC transporter ATP-binding protein [Streptomyces albus J1074]
 gi|291358116|gb|EFE85018.1| ABC transporter ATP-binding protein [Streptomyces albus J1074]
          Length = 539

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + ++   L+     V        + +  G        R +L+S       
Sbjct: 37  GPNGAGKTTLLRIVSGELKPHGGTVTVSGGLGVMPQFVGSVRDERTVRDLLVSVAPSRLR 96

Query: 64  AEAEAIVFAAARLDH 78
             A A+     R +H
Sbjct: 97  EAAAAV----DRAEH 107


>gi|268600435|ref|ZP_06134602.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268584566|gb|EEZ49242.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
          Length = 172

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
           FEG + AGK   I      L  +   V    +P  T   + 
Sbjct: 84  FEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPTDTERGQW 124


>gi|221215021|ref|ZP_03587989.1| lipoprotein-releasing system ATP-binding protein LolD
          [Burkholderia multivorans CGD1]
 gi|221165248|gb|EED97726.1| lipoprotein-releasing system ATP-binding protein LolD
          [Burkholderia multivorans CGD1]
          Length = 238

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          + +G FI   G  G+GKTT ++L+
Sbjct: 30 LAAGRFIVLAGPSGSGKTTLLNLI 53


>gi|222111328|ref|YP_002553592.1| arsenite-activated ATPase ArsA [Acidovorax ebreus TPSY]
 gi|221730772|gb|ACM33592.1| arsenite-activated ATPase ArsA [Acidovorax ebreus TPSY]
          Length = 587

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 25/89 (28%), Gaps = 13/89 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L  +   VH+T         +     L +  V 
Sbjct: 333 MGKG---------GVGKTTLAAAIAVELAHRGLPVHLTTSDPAAHLTDTLEASLDNLTVS 383

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME 89
                AE   +      HV       L  
Sbjct: 384 RIDPHAETERY----RQHVLETQGAQLDA 408


>gi|210622946|ref|ZP_03293451.1| hypothetical protein CLOHIR_01399 [Clostridium hiranonis DSM
          13275]
 gi|210153912|gb|EEA84918.1| hypothetical protein CLOHIR_01399 [Clostridium hiranonis DSM
          13275]
          Length = 212

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          + I+ +G  GAGK+T   L+ + L     D
Sbjct: 1  MIIAVDGPAGAGKSTISKLIAKKLNINYID 30


>gi|196232233|ref|ZP_03131087.1| cobalamin synthesis protein P47K [Chthoniobacter flavus Ellin428]
 gi|196223601|gb|EDY18117.1| cobalamin synthesis protein P47K [Chthoniobacter flavus Ellin428]
          Length = 367

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48
          GAGKTT ++ L + L  +   V +     G    +
Sbjct: 7  GAGKTTAVAKLAQRLTERGLKVGLITNDQGRELVD 41


>gi|166713310|ref|ZP_02244517.1| adenylate kinase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 187

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 68/208 (32%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T +       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKD-----------TFDIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  +   +   G   +      ++L  +  + 
Sbjct: 52  ----VMARGDLVSDDILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALDALLSKI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLTRVDGVGSLDEVLERIRKTL 185


>gi|154151463|ref|YP_001405081.1| ATPase [Candidatus Methanoregula boonei 6A8]
 gi|154000015|gb|ABS56438.1| PilT protein domain protein [Methanoregula boonei 6A8]
          Length = 658

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
             GL I+  G  GAGKTT    +  FL    Y V     P
Sbjct: 260 RRGLIIA--GSPGAGKTTLAQSIAIFLSDNGYVVKTMEAP 297


>gi|153008260|ref|YP_001369475.1| signal recognition particle-docking protein FtsY [Ochrobactrum
           anthropi ATCC 49188]
 gi|151560148|gb|ABS13646.1| signal recognition particle-docking protein FtsY [Ochrobactrum
           anthropi ATCC 49188]
          Length = 494

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 298 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 353

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 354 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 399


>gi|78062903|ref|YP_372811.1| type II secretion system protein E [Burkholderia sp. 383]
 gi|77970788|gb|ABB12167.1| type II secretion system protein E [Burkholderia sp. 383]
          Length = 474

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I   G  G+GKTT ++ L + +++    V
Sbjct: 253 IVISGGTGSGKTTLLNALSQHIEQHERIV 281


>gi|76155378|gb|AAX26659.2| SJCHGC07129 protein [Schistosoma japonicum]
          Length = 230

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 22/56 (39%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            G  I   G  G+GKTT + +L R +  K   V    E  G          +LS G
Sbjct: 64  GGPIILLTGPTGSGKTTAVQVLARSISDKVDVVEFLDEGIGHEEYTEIERFVLSSG 119


>gi|33600031|ref|NP_887591.1| ATP-binding component of ABC transporter [Bordetella
          bronchiseptica RB50]
 gi|33567629|emb|CAE31542.1| ATP-binding component of ABC transporter [Bordetella
          bronchiseptica RB50]
          Length = 354

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          SG F +  G  G GKTT + +L  F++  +  +  
Sbjct: 27 SGKFFTLLGPSGCGKTTLLRMLAGFIRPNDGRILF 61


>gi|153947128|ref|YP_001402259.1| adenylylsulfate kinase [Yersinia pseudotuberculosis IP 31758]
 gi|152958623|gb|ABS46084.1| adenylylsulfate kinase [Yersinia pseudotuberculosis IP 31758]
          Length = 213

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL      +G   + 
Sbjct: 45  FTGLSGSGKSTLAGALEQALFARGVSTY-----------------LLDGDNVRYGLCRDL 87

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 88  GFSDADRRENIRRVGEVAKLMVDAGLVVLT 117


>gi|119387326|ref|YP_918360.1| ABC transporter related [Paracoccus denitrificans PD1222]
 gi|119377901|gb|ABL72664.1| ABC transporter related protein [Paracoccus denitrificans PD1222]
          Length = 382

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI+  G  G+GKTT ++LL 
Sbjct: 58 GEFITLLGPSGSGKTTLLNLLA 79


>gi|330445045|ref|ZP_08308699.1| adenylylsulfate kinase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328493163|dbj|GAA03196.1| adenylylsulfate kinase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 207

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 40/144 (27%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    +  +                 LL       G   + 
Sbjct: 39  FTGLSGAGKSTVAGALENKLAELGHHTY-----------------LLDGDNVRHGLCRDL 81

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              +  R +++  +   A      G I+L         A+       + L  D       
Sbjct: 82  GFSSEDRRENIRRIGEVATLMADAGLIVLS--------AFISPHREERQLVRD------- 126

Query: 126 QEVMPD---CTIILDLPVDIGLKR 146
             ++PD     + +D P+    KR
Sbjct: 127 --LLPDGEFIEVFVDTPLVECEKR 148


>gi|322711567|gb|EFZ03140.1| adenylyl-sulfate kinase [Metarhizium anisopliae ARSEF 23]
          Length = 207

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 36/153 (23%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T  + L++ L       +                  L      
Sbjct: 22  QRGLTIWLTGLSASGKSTVATALEQHLLHLGRAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--------YQGERDSSQ 113
           FG   +       R +++  +   A +         F DSS          Y+ +RD ++
Sbjct: 65  FGLNKDLGFSEKDRNENIRRISEVAKL---------FADSSTIAITSFISPYRADRDVAR 115

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
              L +  +    E +P   + +D+P+++  +R
Sbjct: 116 Q--LHAASQDVKDEPIPFVEVFVDVPLEVAEQR 146


>gi|310793748|gb|EFQ29209.1| adenylylsulfate kinase [Glomerella graminicola M1.001]
          Length = 210

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 46/142 (32%), Gaps = 32/142 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+  +GK+T  + L++ L       +                  L      FG   +   
Sbjct: 31  GLSASGKSTVATALEQHLLHLGVAAYR-----------------LDGDNVRFGLNKDLGF 73

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI------S 124
               R +++  +   A +         F DSS        S         +E+      +
Sbjct: 74  SEKDRNENIRRIAEVAKL---------FADSSMVAITSFISPYRADRQLARELHSQAGQN 124

Query: 125 VQEVMPDCTIILDLPVDIGLKR 146
             + +P   I +D+P+++  +R
Sbjct: 125 NDDAIPFIEIFVDVPLEVAEQR 146


>gi|307250551|ref|ZP_07532494.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306857415|gb|EFM89528.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
          Length = 212

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 55/233 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T    +             T         +  R  +      E G +A
Sbjct: 3   IILLGAPGAGKGTQAQFMMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 49

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           +A++        V + +  AL++ +I   D    + +   G   +      D+L++    
Sbjct: 50  KALM---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---S 99

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166
            V  D  +  D+  ++ ++R+  R                       +    D   R+D 
Sbjct: 100 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDD 159

Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
                     + H++ +     +   A     R   +D     + V+  +  I
Sbjct: 160 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKI 212


>gi|306843384|ref|ZP_07475985.1| signal recognition particle-docking protein FtsY [Brucella sp. BO1]
 gi|306276075|gb|EFM57775.1| signal recognition particle-docking protein FtsY [Brucella sp. BO1]
          Length = 469

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 273 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 328

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 329 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 374


>gi|298375143|ref|ZP_06985100.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. 3_1_19]
 gi|298267643|gb|EFI09299.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Bacteroides sp. 3_1_19]
          Length = 462

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 RKGEFVTILGPSGCGKTTLLRLIA 56


>gi|325673637|ref|ZP_08153328.1| DNA helicase [Rhodococcus equi ATCC 33707]
 gi|325555658|gb|EGD25329.1| DNA helicase [Rhodococcus equi ATCC 33707]
          Length = 1956

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           +  EG  G GKT  I+ L   L  +   V VT E
Sbjct: 359 VVVEGPPGTGKTHTIANLVSALLAQGQRVLVTSE 392


>gi|291437818|ref|ZP_06577208.1| adenylate kinase [Streptomyces ghanaensis ATCC 14672]
 gi|291340713|gb|EFE67669.1| adenylate kinase [Streptomyces ghanaensis ATCC 14672]
          Length = 217

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 19/152 (12%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + L   L+  +           +   E  +             + 
Sbjct: 3   IVLVGPPGAGKGTQATRLAEKLRIPHISTGDLFRANISRQTELGKLAKSYMDAGNLVPDE 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
             I  A  R++      +P    G   L D F          R+ SQ   LD L  +  +
Sbjct: 63  VTIAMAKDRME------QPDAEGGF--LLDGF---------PRNVSQAQALDEL--LETE 103

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
            +  D  + L+ P D  +KR+  R   R+ + 
Sbjct: 104 GIELDAVLDLEAPEDEVVKRIAGRRICRKDSS 135


>gi|289450062|ref|YP_003475341.1| cytidylate kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184609|gb|ADC91034.1| cytidylate kinase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 227

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ 29
          I+ +G  GAGK+T    +   L+
Sbjct: 6  IAIDGPAGAGKSTLARAVAEKLK 28


>gi|262196373|ref|YP_003267582.1| adenylylsulfate kinase [Haliangium ochraceum DSM 14365]
 gi|262079720|gb|ACY15689.1| adenylylsulfate kinase [Haliangium ochraceum DSM 14365]
          Length = 202

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
            G  + F G+ GAGK+T  + +   LQ     V
Sbjct: 5  KKGFVLWFTGLSGAGKSTLSARVAAHLQAAGCPV 38


>gi|260893019|ref|YP_003239116.1| cytidylate kinase [Ammonifex degensii KC4]
 gi|260865160|gb|ACX52266.1| cytidylate kinase [Ammonifex degensii KC4]
          Length = 218

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T   LL   L
Sbjct: 3  IAIDGPAGAGKSTVAKLLASRL 24


>gi|254717993|ref|ZP_05179804.1| cell division protein FtsY [Brucella sp. 83/13]
 gi|265982939|ref|ZP_06095674.1| signal recognition particle-docking protein FtsY [Brucella sp.
           83/13]
 gi|306839772|ref|ZP_07472573.1| signal recognition particle-docking protein FtsY [Brucella sp. NF
           2653]
 gi|264661531|gb|EEZ31792.1| signal recognition particle-docking protein FtsY [Brucella sp.
           83/13]
 gi|306405127|gb|EFM61405.1| signal recognition particle-docking protein FtsY [Brucella sp. NF
           2653]
          Length = 475

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 279 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 334

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 335 LGADAAGLAYDTWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 380


>gi|229258562|gb|ACQ45586.1| cell division protein FtsY [Vesicomya sp. mt-II symbiont]
          Length = 194

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 17/93 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-------G 63
           G+ GAGKTT I  L +  Q +   V +    G T  A A   + +    ++        G
Sbjct: 45  GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAVEQLKVWGERNQIPVIAQTTG 102

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           A+A +++F A +    +N+         IL+ D
Sbjct: 103 ADAASVIFDAYQSAQAKNI--------DILIAD 127


>gi|197285881|ref|YP_002151753.1| toxin transporter [Proteus mirabilis HI4320]
 gi|194683368|emb|CAR44075.1| putative toxin transporter [Proteus mirabilis HI4320]
          Length = 707

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
           +G FI   G  G+GK+T   L++RF
Sbjct: 494 AGKFIGITGPSGSGKSTITRLIQRF 518


>gi|167623675|ref|YP_001673969.1| hypothetical protein Shal_1744 [Shewanella halifaxensis HAW-EB4]
 gi|167353697|gb|ABZ76310.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
          Length = 1916

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 3   SGLFISFEGIEGAGKT-THISLLKRFLQRKNYDVHVTRE 40
            G  +  EG  G+GK+ T  +L+   +  +   V    E
Sbjct: 434 KGKNLVIEGPPGSGKSQTITNLIAAAI-SQGKKVLFVAE 471


>gi|218903085|ref|YP_002450919.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH820]
 gi|228927027|ref|ZP_04090093.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar pondicheriensis BGSC
          4BA1]
 gi|218537750|gb|ACK90148.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus AH820]
 gi|228832762|gb|EEM78333.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar pondicheriensis BGSC
          4BA1]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGKEITKLSISDRTR 78


>gi|158521947|ref|YP_001529817.1| DNA repair photolyase-like protein [Desulfococcus oleovorans Hxd3]
 gi|158510773|gb|ABW67740.1| DNA repair photolyase-like protein [Desulfococcus oleovorans Hxd3]
          Length = 371

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 32/170 (18%)

Query: 18  TTHISLLK--RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
           TT    L   R  +   Y V    +P           ++L  G +E        +F A  
Sbjct: 208 TTLSQRLATARACRELGYPVAFHFDP-----------IVLYEGCEEEYLAVVDRMFEAVA 256

Query: 76  LDHVENV------IRPALMEGKILLCDRFLDSSYAYQ-------GERDSSQHLFLDSLQE 122
            +H+  +        P L   K ++ +RF DS   Y         +    + L +   ++
Sbjct: 257 PEHIVWISLGTFRFMPQL---KPVIQERFPDSRIVYGEFITGMDRKMRYFKPLRIALCRK 313

Query: 123 ISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
           I+ +     PD T+   +  D   +R    +  ++   L     K  + H
Sbjct: 314 IAQRIRQHDPDVTVYFCMEDDEVWQRCMG-FVPKQKGGLARMLDKSAVAH 362


>gi|78066965|ref|YP_369734.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Burkholderia sp. 383]
 gi|77967710|gb|ABB09090.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase
           [Burkholderia sp. 383]
          Length = 640

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 20/85 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +L+++ L       +                 LL       G   +   
Sbjct: 475 GLSGAGKSTIANLVEKRLHALGKHTY-----------------LLDGDNVRHGLNRDLGF 517

Query: 71  FAAARLD---HVENVIRPALMEGKI 92
             A R++    V  V R  L  G I
Sbjct: 518 TEADRVENIRRVAEVARLMLDAGLI 542


>gi|50084681|ref|YP_046191.1| ABC transporter ATP-binding protein [Acinetobacter sp. ADP1]
 gi|49530657|emb|CAG68369.1| putative transport protein (ABC superfamily, atp_bind and membrane)
           [Acinetobacter sp. ADP1]
          Length = 610

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           +G  I+  G  G GK+T + LL RF + +   + + R P       + R 
Sbjct: 394 AGQIIAIVGPTGHGKSTVVQLLTRFYEPQQGGIFLDRYPIQDIHLGSLRQ 443


>gi|157825631|ref|YP_001493351.1| putative ABC transporter ATP-binding protein [Rickettsia akari
          str. Hartford]
 gi|157799589|gb|ABV74843.1| putative ABC transporter ATP-binding protein [Rickettsia akari
          str. Hartford]
          Length = 247

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FI   G  G+GK+T   +L  +L+  +  V +
Sbjct: 34 FIVILGHNGSGKSTLAKILAGYLKPTSGKVFL 65


>gi|47568332|ref|ZP_00239034.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus G9241]
 gi|229155544|ref|ZP_04283652.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus ATCC 4342]
 gi|47555025|gb|EAL13374.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus G9241]
 gi|228627862|gb|EEK84581.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus ATCC 4342]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITNLSISDRTR 78


>gi|329954295|ref|ZP_08295389.1| putative spermidine/putrescine ABC transporter, ATP-binding
          protein PotA [Bacteroides clarus YIT 12056]
 gi|328528001|gb|EGF54987.1| putative spermidine/putrescine ABC transporter, ATP-binding
          protein PotA [Bacteroides clarus YIT 12056]
          Length = 465

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|323935154|gb|EGB31521.1| dephospho-CoA kinase [Escherichia coli E1520]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|322805379|emb|CBZ02943.1| ABC transporter ATP-binding protein [Clostridium botulinum H04402
           065]
          Length = 571

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M  G   +  G  G+GK+T + L+ RF   +   V + +E
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKE 395


>gi|303256796|ref|ZP_07342810.1| lipid A export permease/ATP-binding protein MsbA [Burkholderiales
           bacterium 1_1_47]
 gi|302860287|gb|EFL83364.1| lipid A export permease/ATP-binding protein MsbA [Burkholderiales
           bacterium 1_1_47]
          Length = 580

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           +G  I+F G  GAGK+T I+++ RF+     ++     P      E+ R 
Sbjct: 355 AGKMIAFVGASGAGKSTIINMIPRFMVPTKGEILFDGIPQNEMTLESIRR 404


>gi|301644240|ref|ZP_07244247.1| conserved domain protein [Escherichia coli MS 146-1]
 gi|301077437|gb|EFK92243.1| conserved domain protein [Escherichia coli MS 146-1]
          Length = 922

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
           +G  I   G  G GK+T++S L   L  K     
Sbjct: 267 TGKAIVLTGPPGRGKSTYLSALCDTLAEKGIPTV 300


>gi|291536095|emb|CBL09207.1| cytidylate kinase [Roseburia intestinalis M50/1]
          Length = 221

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T    L + L
Sbjct: 5  IAIDGPAGAGKSTIAKRLAKKL 26


>gi|289423349|ref|ZP_06425157.1| PilT [Peptostreptococcus anaerobius 653-L]
 gi|289156280|gb|EFD04937.1| PilT [Peptostreptococcus anaerobius 653-L]
          Length = 355

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           M SGL I   G  G+GK+T ++ +   +        +T E       E+ + ++
Sbjct: 121 MKSGLVI-ISGPTGSGKSTSMAAIVEEININYQKHIITIEDPIEYEFESKKSLI 173


>gi|239983343|ref|ZP_04705867.1| ABC transporter ATP-binding protein [Streptomyces albus J1074]
          Length = 534

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + ++   L+     V        + +  G        R +L+S       
Sbjct: 32  GPNGAGKTTLLRIVSGELKPHGGTVTVSGGLGVMPQFVGSVRDERTVRDLLVSVAPSRLR 91

Query: 64  AEAEAIVFAAARLDH 78
             A A+     R +H
Sbjct: 92  EAAAAV----DRAEH 102


>gi|193216793|ref|YP_002000035.1| excinuclease ABC subunit A [Mycoplasma arthritidis 158L3-1]
 gi|193002116|gb|ACF07331.1| excinuclease ABC subunit A [Mycoplasma arthritidis 158L3-1]
          Length = 939

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHIS-----LLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G  I+  G+ G+GK++ I+      L RFL   +YD+    +  G    +    +
Sbjct: 632 GKLIAITGVSGSGKSSLINEELVTRLSRFLNSASYDIRKDADLSGQFNVDKLVQI 686


>gi|116072517|ref|ZP_01469784.1| hypothetical protein BL107_12036 [Synechococcus sp. BL107]
 gi|116065039|gb|EAU70798.1| hypothetical protein BL107_12036 [Synechococcus sp. BL107]
          Length = 260

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 47/152 (30%), Gaps = 36/152 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M     I+  G  G GKT   + ++  L          R  G T          L  G +
Sbjct: 1   MQQTWLIT--GPPGCGKT---NWIRETLLNHGGACVYLRLDGSTHDG-------LELGHN 48

Query: 61  EFGAEAEAIVFAAARLDHVENVIRP----ALMEGKILLCDRFL------DSSYAYQGERD 110
                +  +     ++  +E+   P     L   +     RF+       SS A     D
Sbjct: 49  AGIDRSWLM----DQIPQLEDGSEPPSDSQLSSDE-----RFVLIEAQQFSSTA--QNDD 97

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDI 142
                    LQ+ +   + PD T+   +  ++
Sbjct: 98  ELDPQIKQQLQQFN---LTPDRTLHFGVDPEL 126


>gi|72080687|ref|YP_287745.1| hypothetical protein MHP7448_0351 [Mycoplasma hyopneumoniae 7448]
 gi|71913811|gb|AAZ53722.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 7448]
          Length = 446

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 13/86 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTRE---------PGGTPAAEAARHVLLSCGVDEFGA 64
           G+GKTT +  +++F     Y V  T E                +  R   ++  +     
Sbjct: 275 GSGKTTFLKKVEKF----GYSVLYTDEFFHNCYLASGECFKIIKKIRPDFINENIVNKNK 330

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG 90
               ++ +    D +E  I P L   
Sbjct: 331 IRNFMLKSKQNRDLIEKSIYPFLENH 356


>gi|28211072|ref|NP_782016.1| putative taurine transport ATP-binding protein tauB [Clostridium
          tetani E88]
 gi|28203511|gb|AAO35953.1| putative taurine transport ATP-binding protein tauB [Clostridium
          tetani E88]
          Length = 265

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +N G FI   G  G GK+T + ++  FL+
Sbjct: 39 INEGEFICVLGPSGCGKSTLLKIIAGFLK 67


>gi|37525297|ref|NP_928641.1| hypothetical protein plu1331 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784724|emb|CAE13624.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 716

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           + SG FI   G  G+GK+T   LL+R 
Sbjct: 500 IKSGQFIGITGPSGSGKSTLTRLLQRL 526


>gi|89076709|ref|ZP_01162996.1| adenylylsulfate kinase [Photobacterium sp. SKA34]
 gi|89047629|gb|EAR53237.1| adenylylsulfate kinase [Photobacterium sp. SKA34]
          Length = 207

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 35/115 (30%), Gaps = 28/115 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G   + 
Sbjct: 39  FTGLSGAGKSTVAGALENKLAEIGYHTY-----------------LLDGDNVRHGLCRDL 81

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
              A  R +++  +   A      G I+L         A+       + L  D L
Sbjct: 82  GFSAEDRRENIRRIGEVATLMADAGLIVLS--------AFISPHREERQLVRDLL 128


>gi|150390389|ref|YP_001320438.1| cytidylate kinase [Alkaliphilus metalliredigens QYMF]
 gi|226723072|sp|A6TRG1|KCY_ALKMQ RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|149950251|gb|ABR48779.1| cytidylate kinase [Alkaliphilus metalliredigens QYMF]
          Length = 220

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T    L   L
Sbjct: 6  IAIDGPAGAGKSTVAKKLAALL 27


>gi|57505060|ref|ZP_00371008.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|323141318|ref|ZP_08076213.1| hypothetical protein HMPREF9443_00985 [Phascolarctobacterium sp.
           YIT 12067]
 gi|57019145|gb|EAL55857.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|322414205|gb|EFY05029.1| hypothetical protein HMPREF9443_00985 [Phascolarctobacterium sp.
           YIT 12067]
          Length = 181

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 50/163 (30%), Gaps = 25/163 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S + +        VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGAPGTGKTTTASAVAKE-SDLEKSVHMHTDDFYHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +     EA + AA R              G  ++ D                   FL   
Sbjct: 60  QNLIVIEAFLEAAKRYA----------RGGYDVIVD-------------GIIGPWFLKPW 96

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           Q +  +       IIL    +  LKR   R  L     ++  E
Sbjct: 97  QSLVREHYEVHY-IILRASKEETLKRAVERSKLDRKTNIELVE 138


>gi|15799787|ref|NP_285799.1| dephospho-CoA kinase [Escherichia coli O157:H7 EDL933]
 gi|15829361|ref|NP_308134.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. Sakai]
 gi|16128096|ref|NP_414645.1| dephospho-CoA kinase [Escherichia coli str. K-12 substr. MG1655]
 gi|74310722|ref|YP_309141.1| dephospho-CoA kinase [Shigella sonnei Ss046]
 gi|82542707|ref|YP_406654.1| dephospho-CoA kinase [Shigella boydii Sb227]
 gi|82775510|ref|YP_401857.1| dephospho-CoA kinase [Shigella dysenteriae Sd197]
 gi|89106985|ref|AP_000765.1| dephospho-CoA kinase [Escherichia coli str. K-12 substr. W3110]
 gi|157156454|ref|YP_001461273.1| dephospho-CoA kinase [Escherichia coli E24377A]
 gi|157159573|ref|YP_001456891.1| dephospho-CoA kinase [Escherichia coli HS]
 gi|168755712|ref|ZP_02780719.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4401]
 gi|168764864|ref|ZP_02789871.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4501]
 gi|168770430|ref|ZP_02795437.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4486]
 gi|168776811|ref|ZP_02801818.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4196]
 gi|168781989|ref|ZP_02806996.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4076]
 gi|168789631|ref|ZP_02814638.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC869]
 gi|168801436|ref|ZP_02826443.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC508]
 gi|170021542|ref|YP_001726496.1| dephospho-CoA kinase [Escherichia coli ATCC 8739]
 gi|170079741|ref|YP_001729061.1| dephospho-CoA kinase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684117|ref|YP_001742224.1| dephospho-CoA kinase [Escherichia coli SMS-3-5]
 gi|191169646|ref|ZP_03031350.1| dephospho-CoA kinase [Escherichia coli B7A]
 gi|193063266|ref|ZP_03044357.1| dephospho-CoA kinase [Escherichia coli E22]
 gi|194440203|ref|ZP_03072242.1| dephospho-CoA kinase [Escherichia coli 101-1]
 gi|195938216|ref|ZP_03083598.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4024]
 gi|208807501|ref|ZP_03249838.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208813745|ref|ZP_03255074.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208820868|ref|ZP_03261188.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209398961|ref|YP_002268710.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4115]
 gi|209917295|ref|YP_002291379.1| dephospho-CoA kinase [Escherichia coli SE11]
 gi|217325369|ref|ZP_03441453.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. TW14588]
 gi|218687978|ref|YP_002396190.1| dephospho-CoA kinase [Escherichia coli ED1a]
 gi|238899503|ref|YP_002925299.1| dephospho-CoA kinase [Escherichia coli BW2952]
 gi|253774868|ref|YP_003037699.1| dephospho-CoA kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160224|ref|YP_003043332.1| dephospho-CoA kinase [Escherichia coli B str. REL606]
 gi|254791239|ref|YP_003076076.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. TW14359]
 gi|256025416|ref|ZP_05439281.1| dephospho-CoA kinase [Escherichia sp. 4_1_40B]
 gi|260842338|ref|YP_003220116.1| dephospho-CoA kinase [Escherichia coli O103:H2 str. 12009]
 gi|260853316|ref|YP_003227207.1| dephospho-CoA kinase [Escherichia coli O26:H11 str. 11368]
 gi|260866255|ref|YP_003232657.1| dephospho-CoA kinase [Escherichia coli O111:H- str. 11128]
 gi|261226859|ref|ZP_05941140.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255263|ref|ZP_05947796.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. FRIK966]
 gi|291280928|ref|YP_003497746.1| Dephospho-CoA kinase [Escherichia coli O55:H7 str. CB9615]
 gi|293417978|ref|ZP_06660600.1| dephospho-CoA kinase [Escherichia coli B185]
 gi|293476763|ref|ZP_06665171.1| dephospho-CoA kinase [Escherichia coli B088]
 gi|300816140|ref|ZP_07096363.1| dephospho-CoA kinase [Escherichia coli MS 107-1]
 gi|300905512|ref|ZP_07123276.1| dephospho-CoA kinase [Escherichia coli MS 84-1]
 gi|300919658|ref|ZP_07136149.1| dephospho-CoA kinase [Escherichia coli MS 115-1]
 gi|300923115|ref|ZP_07139175.1| dephospho-CoA kinase [Escherichia coli MS 182-1]
 gi|300931771|ref|ZP_07147071.1| dephospho-CoA kinase [Escherichia coli MS 187-1]
 gi|300949878|ref|ZP_07163842.1| dephospho-CoA kinase [Escherichia coli MS 116-1]
 gi|300955968|ref|ZP_07168301.1| dephospho-CoA kinase [Escherichia coli MS 175-1]
 gi|301028585|ref|ZP_07191815.1| dephospho-CoA kinase [Escherichia coli MS 196-1]
 gi|301303796|ref|ZP_07209916.1| dephospho-CoA kinase [Escherichia coli MS 124-1]
 gi|301330116|ref|ZP_07222785.1| dephospho-CoA kinase [Escherichia coli MS 78-1]
 gi|301646416|ref|ZP_07246298.1| dephospho-CoA kinase [Escherichia coli MS 146-1]
 gi|306815300|ref|ZP_07449449.1| dephospho-CoA kinase [Escherichia coli NC101]
 gi|307136703|ref|ZP_07496059.1| dephospho-CoA kinase [Escherichia coli H736]
 gi|309787223|ref|ZP_07681835.1| dephospho-CoA kinase [Shigella dysenteriae 1617]
 gi|309796092|ref|ZP_07690504.1| dephospho-CoA kinase [Escherichia coli MS 145-7]
 gi|312970197|ref|ZP_07784379.1| dephospho-CoA kinase [Escherichia coli 1827-70]
 gi|331640555|ref|ZP_08341703.1| dephospho-CoA kinase [Escherichia coli H736]
 gi|331645213|ref|ZP_08346324.1| dephospho-CoA kinase [Escherichia coli M605]
 gi|331651000|ref|ZP_08352028.1| dephospho-CoA kinase [Escherichia coli M718]
 gi|331661148|ref|ZP_08362080.1| dephospho-CoA kinase [Escherichia coli TA206]
 gi|331661476|ref|ZP_08362400.1| dephospho-CoA kinase [Escherichia coli TA143]
 gi|331666339|ref|ZP_08367220.1| dephospho-CoA kinase [Escherichia coli TA271]
 gi|62288047|sp|P0A6I9|COAE_ECOLI RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|62288048|sp|P0A6J0|COAE_ECO57 RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|109824739|sp|Q326D2|COAE_SHIBS RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|109824754|sp|Q32JY9|COAE_SHIDS RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|109824763|sp|Q3Z5Q6|COAE_SHISS RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|12512809|gb|AAG54407.1|AE005186_13 putative DNA repair protein [Escherichia coli O157:H7 str. EDL933]
 gi|1786292|gb|AAC73214.1| dephospho-CoA kinase [Escherichia coli str. K-12 substr. MG1655]
 gi|13359563|dbj|BAB33530.1| putative DNA repair protein [Escherichia coli O157:H7 str. Sakai]
 gi|73854199|gb|AAZ86906.1| putative DNA repair protein [Shigella sonnei Ss046]
 gi|81239658|gb|ABB60368.1| putative DNA repair protein [Shigella dysenteriae Sd197]
 gi|81244118|gb|ABB64826.1| putative DNA repair protein [Shigella boydii Sb227]
 gi|85674328|dbj|BAE76040.1| dephospho-CoA kinase [Escherichia coli str. K12 substr. W3110]
 gi|157065253|gb|ABV04508.1| dephospho-CoA kinase [Escherichia coli HS]
 gi|157078484|gb|ABV18192.1| dephospho-CoA kinase [Escherichia coli E24377A]
 gi|169756470|gb|ACA79169.1| dephospho-CoA kinase [Escherichia coli ATCC 8739]
 gi|169887576|gb|ACB01283.1| dephospho-CoA kinase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521835|gb|ACB20013.1| dephospho-CoA kinase [Escherichia coli SMS-3-5]
 gi|187767839|gb|EDU31683.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4196]
 gi|189000495|gb|EDU69481.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4076]
 gi|189356995|gb|EDU75414.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4401]
 gi|189360727|gb|EDU79146.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4486]
 gi|189365211|gb|EDU83627.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4501]
 gi|189370787|gb|EDU89203.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC869]
 gi|189376414|gb|EDU94830.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC508]
 gi|190900313|gb|EDV60158.1| dephospho-CoA kinase [Escherichia coli B7A]
 gi|192931174|gb|EDV83777.1| dephospho-CoA kinase [Escherichia coli E22]
 gi|194420864|gb|EDX36912.1| dephospho-CoA kinase [Escherichia coli 101-1]
 gi|208727302|gb|EDZ76903.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208735022|gb|EDZ83709.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208740991|gb|EDZ88673.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209160361|gb|ACI37794.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. EC4115]
 gi|209746416|gb|ACI71515.1| putative DNA repair protein [Escherichia coli]
 gi|209746418|gb|ACI71516.1| putative DNA repair protein [Escherichia coli]
 gi|209746420|gb|ACI71517.1| putative DNA repair protein [Escherichia coli]
 gi|209746422|gb|ACI71518.1| putative DNA repair protein [Escherichia coli]
 gi|209910554|dbj|BAG75628.1| dephospho-CoA kinase [Escherichia coli SE11]
 gi|217321590|gb|EEC30014.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. TW14588]
 gi|218425542|emb|CAR06325.1| dephospho-CoA kinase [Escherichia coli ED1a]
 gi|238860749|gb|ACR62747.1| dephospho-CoA kinase [Escherichia coli BW2952]
 gi|242375938|emb|CAQ30619.1| dephospho-CoA kinase [Escherichia coli BL21(DE3)]
 gi|253325912|gb|ACT30514.1| dephospho-CoA kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972125|gb|ACT37796.1| dephospho-CoA kinase [Escherichia coli B str. REL606]
 gi|253976334|gb|ACT42004.1| dephospho-CoA kinase [Escherichia coli BL21(DE3)]
 gi|254590639|gb|ACT70000.1| putative DNA repair protein [Escherichia coli O157:H7 str. TW14359]
 gi|257751965|dbj|BAI23467.1| dephospho-CoA kinase [Escherichia coli O26:H11 str. 11368]
 gi|257757485|dbj|BAI28982.1| dephospho-CoA kinase [Escherichia coli O103:H2 str. 12009]
 gi|257762611|dbj|BAI34106.1| dephospho-CoA kinase [Escherichia coli O111:H- str. 11128]
 gi|260450691|gb|ACX41113.1| dephospho-CoA kinase [Escherichia coli DH1]
 gi|281177322|dbj|BAI53652.1| dephospho-CoA kinase [Escherichia coli SE15]
 gi|290760801|gb|ADD54762.1| Dephospho-CoA kinase [Escherichia coli O55:H7 str. CB9615]
 gi|291321216|gb|EFE60658.1| dephospho-CoA kinase [Escherichia coli B088]
 gi|291430696|gb|EFF03694.1| dephospho-CoA kinase [Escherichia coli B185]
 gi|299878396|gb|EFI86607.1| dephospho-CoA kinase [Escherichia coli MS 196-1]
 gi|300317188|gb|EFJ66972.1| dephospho-CoA kinase [Escherichia coli MS 175-1]
 gi|300402662|gb|EFJ86200.1| dephospho-CoA kinase [Escherichia coli MS 84-1]
 gi|300413298|gb|EFJ96608.1| dephospho-CoA kinase [Escherichia coli MS 115-1]
 gi|300420570|gb|EFK03881.1| dephospho-CoA kinase [Escherichia coli MS 182-1]
 gi|300450742|gb|EFK14362.1| dephospho-CoA kinase [Escherichia coli MS 116-1]
 gi|300460431|gb|EFK23924.1| dephospho-CoA kinase [Escherichia coli MS 187-1]
 gi|300531347|gb|EFK52409.1| dephospho-CoA kinase [Escherichia coli MS 107-1]
 gi|300840923|gb|EFK68683.1| dephospho-CoA kinase [Escherichia coli MS 124-1]
 gi|300843863|gb|EFK71623.1| dephospho-CoA kinase [Escherichia coli MS 78-1]
 gi|301075386|gb|EFK90192.1| dephospho-CoA kinase [Escherichia coli MS 146-1]
 gi|305850962|gb|EFM51417.1| dephospho-CoA kinase [Escherichia coli NC101]
 gi|308120334|gb|EFO57596.1| dephospho-CoA kinase [Escherichia coli MS 145-7]
 gi|308924801|gb|EFP70296.1| dephospho-CoA kinase [Shigella dysenteriae 1617]
 gi|309700313|emb|CBI99601.1| dephospho-CoA kinase [Escherichia coli ETEC H10407]
 gi|310337695|gb|EFQ02806.1| dephospho-CoA kinase [Escherichia coli 1827-70]
 gi|315134796|dbj|BAJ41955.1| dephospho-CoA kinase [Escherichia coli DH1]
 gi|315254902|gb|EFU34870.1| dephospho-CoA kinase [Escherichia coli MS 85-1]
 gi|315299997|gb|EFU59235.1| dephospho-CoA kinase [Escherichia coli MS 16-3]
 gi|315616119|gb|EFU96738.1| dephospho-CoA kinase [Escherichia coli 3431]
 gi|320172807|gb|EFW48039.1| Dephospho-CoA kinase [Shigella dysenteriae CDC 74-1112]
 gi|320183611|gb|EFW58454.1| Dephospho-CoA kinase [Shigella flexneri CDC 796-83]
 gi|320190375|gb|EFW65025.1| Dephospho-CoA kinase [Escherichia coli O157:H7 str. EC1212]
 gi|320642141|gb|EFX11492.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. G5101]
 gi|320658227|gb|EFX25956.1| dephospho-CoA kinase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663536|gb|EFX30820.1| dephospho-CoA kinase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668848|gb|EFX35643.1| dephospho-CoA kinase [Escherichia coli O157:H7 str. LSU-61]
 gi|323157829|gb|EFZ43932.1| dephospho-CoA kinase [Escherichia coli EPECa14]
 gi|323165985|gb|EFZ51765.1| dephospho-CoA kinase [Shigella sonnei 53G]
 gi|323171266|gb|EFZ56914.1| dephospho-CoA kinase [Escherichia coli LT-68]
 gi|323176410|gb|EFZ62002.1| dephospho-CoA kinase [Escherichia coli 1180]
 gi|323181799|gb|EFZ67212.1| dephospho-CoA kinase [Escherichia coli 1357]
 gi|323939858|gb|EGB36058.1| dephospho-CoA kinase [Escherichia coli E482]
 gi|323945731|gb|EGB41779.1| dephospho-CoA kinase [Escherichia coli H120]
 gi|323960048|gb|EGB55694.1| dephospho-CoA kinase [Escherichia coli H489]
 gi|323970774|gb|EGB66028.1| dephospho-CoA kinase [Escherichia coli TA007]
 gi|324008337|gb|EGB77556.1| dephospho-CoA kinase [Escherichia coli MS 57-2]
 gi|324017737|gb|EGB86956.1| dephospho-CoA kinase [Escherichia coli MS 117-3]
 gi|326345178|gb|EGD68921.1| Dephospho-CoA kinase [Escherichia coli O157:H7 str. 1125]
 gi|326346968|gb|EGD70702.1| Dephospho-CoA kinase [Escherichia coli O157:H7 str. 1044]
 gi|331040301|gb|EGI12508.1| dephospho-CoA kinase [Escherichia coli H736]
 gi|331045970|gb|EGI18089.1| dephospho-CoA kinase [Escherichia coli M605]
 gi|331051454|gb|EGI23503.1| dephospho-CoA kinase [Escherichia coli M718]
 gi|331052190|gb|EGI24229.1| dephospho-CoA kinase [Escherichia coli TA206]
 gi|331061391|gb|EGI33354.1| dephospho-CoA kinase [Escherichia coli TA143]
 gi|331066550|gb|EGI38427.1| dephospho-CoA kinase [Escherichia coli TA271]
 gi|332098885|gb|EGJ03836.1| dephospho-CoA kinase [Shigella boydii 3594-74]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|324999618|ref|ZP_08120730.1| signal recognition particle protein [Pseudonocardia sp. P1]
          Length = 522

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++GAGKTT    L R+L+ + + 
Sbjct: 107 GLQGAGKTTLAGKLARWLKGQGHT 130


>gi|317474328|ref|ZP_07933604.1| polyamine ABC transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|316909638|gb|EFV31316.1| polyamine ABC transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 460

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|319793639|ref|YP_004155279.1| hypothetical protein Varpa_2980 [Variovorax paradoxus EPS]
 gi|315596102|gb|ADU37168.1| hypothetical protein Varpa_2980 [Variovorax paradoxus EPS]
          Length = 166

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
          + I   G+ G+GKTT    L   L  
Sbjct: 1  MLIVLSGLPGSGKTTVARELVGRLSA 26


>gi|330935941|ref|XP_003305188.1| hypothetical protein PTT_17961 [Pyrenophora teres f. teres 0-1]
 gi|311317905|gb|EFQ86714.1| hypothetical protein PTT_17961 [Pyrenophora teres f. teres 0-1]
          Length = 1284

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRF 27
             G FI+  G  G GK+T ISLL+RF
Sbjct: 1056 KGQFIALVGASGCGKSTIISLLERF 1080


>gi|307943541|ref|ZP_07658885.1| signal recognition particle-docking protein FtsY [Roseibium sp.
           TrichSKD4]
 gi|307773171|gb|EFO32388.1| signal recognition particle-docking protein FtsY [Roseibium sp.
           TrichSKD4]
          Length = 371

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 16/139 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + L  +   V +    G T  A A     L    +  GAE  A  
Sbjct: 175 GVNGTGKTTTIGKLSQKLAAEGKKVMLAA--GDTFRAAAVEQ--LKIWGERTGAEVIARD 230

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE----ISVQ 126
             A       + ++ A+ +   +L    +D+       R  ++   +D L++    I   
Sbjct: 231 TGADAAGLAFDAMKEAMAKDVDVLL---IDT-----AGRLQNKAELMDELEKVIRVIKKH 282

Query: 127 EVMPDCTIILDLPVDIGLK 145
           +     T++L L    G  
Sbjct: 283 DPEAPHTVLLTLDATTGQN 301


>gi|295134370|ref|YP_003585046.1| ATPase-like protein [Zunongwangia profunda SM-A87]
 gi|294982385|gb|ADF52850.1| ATPase-like protein [Zunongwangia profunda SM-A87]
          Length = 180

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 17/103 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64
           I   G  G GK++ I      L+++ Y              E +R V L    +      
Sbjct: 6   IVITGGPGTGKSSIIF----ELEKRGYTCLH----------EISRQVTLEAQKEGIDQLF 51

Query: 65  EAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQ 106
             + ++F+   L+  +   I     EG ++  DR +    AY 
Sbjct: 52  LEQPLLFSKKLLEGRDAQFIEAEESEGTMIFIDRGVHDVIAYM 94


>gi|288937420|ref|YP_003441479.1| ABC transporter [Klebsiella variicola At-22]
 gi|288892129|gb|ADC60447.1| ABC transporter related protein [Klebsiella variicola At-22]
          Length = 357

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          ++ G F+   G  G GK+T + LL           +L  +N      RE
Sbjct: 24 IHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITATTPRE 72


>gi|270489285|ref|ZP_06206359.1| adenylyl-sulfate kinase [Yersinia pestis KIM D27]
 gi|262367062|gb|ACY63619.1| adenylylsulfate kinase [Yersinia pestis D182038]
 gi|270337789|gb|EFA48566.1| adenylyl-sulfate kinase [Yersinia pestis KIM D27]
          Length = 221

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 53  FTGLSGSGKSTLAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 95

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 96  GFSDADRRENIRRVGEVAKLMVDAGLVVLT 125


>gi|260772131|ref|ZP_05881048.1| adenylylsulfate kinase [Vibrio metschnikovii CIP 69.14]
 gi|260612998|gb|EEX38200.1| adenylylsulfate kinase [Vibrio metschnikovii CIP 69.14]
          Length = 205

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L++ L    Y  +                 LL       G  A+ 
Sbjct: 37  FTGLSGAGKSTIAGALEQRLAELGYHTY-----------------LLDGDNVRHGLCADL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLT 109


>gi|259488182|tpe|CBF87439.1| TPA: ABC multidrug transporter (Eurofung) [Aspergillus nidulans FGSC
            A4]
          Length = 1323

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRFLQ 29
            SG F++F G  G GK+T ISL++RF +
Sbjct: 1089 SGQFVAFVGPSGCGKSTLISLIERFYE 1115


>gi|229521620|ref|ZP_04411038.1| adenylylsulfate kinase [Vibrio cholerae TM 11079-80]
 gi|229341214|gb|EEO06218.1| adenylylsulfate kinase [Vibrio cholerae TM 11079-80]
          Length = 215

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 44  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +  +  G I+L 
Sbjct: 87  GFSEQDRRENIRRIGELAKLMVDAGLIVLT 116


>gi|228985058|ref|ZP_04145226.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228774746|gb|EEM23144.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 263

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 34 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITNLSISDRTR 84


>gi|221122162|ref|XP_002160640.1| PREDICTED: similar to guanylate kinase 1 [Hydra magnipapillata]
          Length = 146

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAAR 51
          +   G  G GK+T I  L      K  + V H TR P         R
Sbjct: 8  VVLSGPSGCGKSTLIKKLTTEFPTKFGFSVSHTTRAPRPNEIDGKGR 54


>gi|218130807|ref|ZP_03459611.1| hypothetical protein BACEGG_02401 [Bacteroides eggerthii DSM
          20697]
 gi|217987151|gb|EEC53482.1| hypothetical protein BACEGG_02401 [Bacteroides eggerthii DSM
          20697]
          Length = 460

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|206580616|ref|YP_002240762.1| sugar ABC transporter, ATP-binding protein [Klebsiella pneumoniae
          342]
 gi|206569674|gb|ACI11450.1| sugar ABC transporter, ATP-binding protein [Klebsiella pneumoniae
          342]
          Length = 357

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          ++ G F+   G  G GK+T + LL           +L  +N      RE
Sbjct: 24 IHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITATTPRE 72


>gi|167760661|ref|ZP_02432788.1| hypothetical protein CLOSCI_03046 [Clostridium scindens ATCC
          35704]
 gi|167661548|gb|EDS05678.1| hypothetical protein CLOSCI_03046 [Clostridium scindens ATCC
          35704]
          Length = 370

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI F G  G GKTT + ++ 
Sbjct: 35 QGEFIVFVGPSGCGKTTLLRMIA 57


>gi|167519717|ref|XP_001744198.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777284|gb|EDQ90901.1| predicted protein [Monosiga brevicollis MX1]
          Length = 317

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 19/138 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA--------EAARHVLLSCG 58
           I+F G+ G GK+T++S +  +L   N  V +         A           R++L    
Sbjct: 102 ITFCGVNGVGKSTNLSKIAFWLLSNNMRVLIAACDTFRSGAVEQLKTHCTKLRNMLQQDD 161

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFL 117
                       +           I  A  EG  ++L D            R       +
Sbjct: 162 QQAPIVSIFDQGYGKDDAGVAALAISLAKTEGYDVVLVD---------TAGRMQDNEPLM 212

Query: 118 DSLQEISVQEVMPDCTII 135
            SL ++      PD  + 
Sbjct: 213 RSLTKLIKHN-KPDLVLF 229


>gi|157151411|ref|YP_001451131.1| excinuclease ABC subunit A [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076205|gb|ABV10888.1| excinuclease ABC, A subunit [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 943

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI+  G+ G+GK+T ++ +LK+ L ++
Sbjct: 634 GKFIAVTGVSGSGKSTLVNSILKKTLAQR 662


>gi|125576803|gb|EAZ18025.1| hypothetical protein OsJ_33573 [Oryza sativa Japonica Group]
          Length = 514

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA---EAEAIVF 71
           +GK+T   ++   L+ +   V VT+E        +   ++     +       + E ++ 
Sbjct: 87  SGKSTVCKMIIDQLRDQ-RVVVVTQE--SFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 143

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISVQEV 128
               L H + V  P                S A   + + S  + L+ +    +  V+++
Sbjct: 144 CMENLKHGKAVDIPNYNFK--------TYKSVASARKVNPSDVIILEGILVFHDSRVRDL 195

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           M +  I +D   D+ L R   R ++ +   +
Sbjct: 196 M-NMKIFVDTDADVRLTRRIRRDTIEKGRDI 225


>gi|33601891|ref|NP_889451.1| glycerol-3-phosphate transporter ATP-binding subunit [Bordetella
           bronchiseptica RB50]
 gi|81836943|sp|Q7WID6|UGPC_BORBR RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
           UgpC
 gi|33576328|emb|CAE33407.1| sn-glycerol-3-phosphate transport ATP-binding protein [Bordetella
           bronchiseptica RB50]
          Length = 362

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 10/74 (13%)

Query: 4   GLFISFEGIEGAGKTTHISLLK--------RFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
           G FI   G  G GK+T + ++           L      V  T EP     A   ++  L
Sbjct: 30  GEFIVIVGPSGCGKSTLMRMVAGLETVTEGEILIDD--KVVNTLEPAERDIAMVFQNYAL 87

Query: 56  SCGVDEFGAEAEAI 69
              +  F   A  +
Sbjct: 88  YPHMSVFDNMAYGL 101


>gi|222099988|ref|YP_002534556.1| Adenylate kinase [Thermotoga neapolitana DSM 4359]
 gi|47115558|sp|Q8GGL2|KAD_THENE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|254807010|sp|B9K8A7|KAD_THENN RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|26985214|gb|AAN86272.1| adenylate kinase [Thermotoga neapolitana]
 gi|221572378|gb|ACM23190.1| Adenylate kinase [Thermotoga neapolitana DSM 4359]
          Length = 220

 Score = 36.2 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 80/242 (33%), Gaps = 69/242 (28%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------LSCGV 59
           ++ F G  GAGK T+   ++    +       T         +  R ++      L   +
Sbjct: 4   YLVFLGPPGAGKGTYAKRIQE---KTGIPHIST--------GDIFRDIVKKENDELGKKI 52

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLF 116
            E   + E +       + V  V++  L E       + D +          R  +Q  F
Sbjct: 53  KEIMEKGELVP-----DELVNEVVKRRLSEKDCEKGFILDGY---------PRTVAQAEF 98

Query: 117 LDS-LQEISVQEVMPDCT--IILDLPVDIGLKRVQNRYSLRESACL----------D--- 160
           LDS L+  + Q      T  ++ D+P D+ ++R+ +R    +   +          D   
Sbjct: 99  LDSFLESQNKQ-----LTAAVLFDVPEDVVVQRLTSRRICPKCGRIYNMISLPPKEDELC 153

Query: 161 -----YFERKDVMIHEKRRQIFL-DIARNQP--------DRCHIVDSAHSFQSVATNILN 206
                   ++D    E  R  +   + + QP             VD      +V   +L 
Sbjct: 154 DDCKVKLVQRDDDKEETVRHRYKVYLEKTQPVIDYYGKKGILKRVDGTIGIDNVVAEVLK 213

Query: 207 IV 208
           I+
Sbjct: 214 II 215


>gi|330431521|gb|AEC16580.1| signal recognition particle protein [Gallibacterium anatis UMN179]
          Length = 458

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 13/114 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G++GAGKTT ++ L +FLQ++    V V       PAA   + +      +       A 
Sbjct: 107 GLQGAGKTTSVAKLAKFLQQRHKKKVMVVSADVYRPAA--IKQL------ETLAQSVNAT 158

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            + +      E +++ AL E K+    +F D        R       ++ +++I
Sbjct: 159 FYPSDASQKPEEIVKAALSEAKL----KFFDVLIVDTAGRLHVDEEMMNEIKQI 208


>gi|326484576|gb|EGE08586.1| DNA replication ATP-dependent helicase dna2 [Trichophyton equinum CBS
            127.97]
          Length = 1596

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 1    MNSGLFISFE------GIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAAR- 51
            M  G  ++ E      G+ G GKTT I+ + R L  +   V +T              R 
Sbjct: 1075 MAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAVDNILLKIRD 1134

Query: 52   ---HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
                +L      +   E +     AA   +    +  +    K++
Sbjct: 1135 DKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVV 1179


>gi|326475655|gb|EGD99664.1| DNA replication helicase Dna2 [Trichophyton tonsurans CBS 112818]
          Length = 1596

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 1    MNSGLFISFE------GIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAAR- 51
            M  G  ++ E      G+ G GKTT I+ + R L  +   V +T              R 
Sbjct: 1075 MAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAVDNILLKIRD 1134

Query: 52   ---HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
                +L      +   E +     AA   +    +  +    K++
Sbjct: 1135 DKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVV 1179


>gi|327295602|ref|XP_003232496.1| DNA replication helicase Dna2 [Trichophyton rubrum CBS 118892]
 gi|326465668|gb|EGD91121.1| DNA replication helicase Dna2 [Trichophyton rubrum CBS 118892]
          Length = 1591

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 1    MNSGLFISFE------GIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAAR- 51
            M  G  ++ E      G+ G GKTT I+ + R L  +   V +T              R 
Sbjct: 1070 MAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAVDNILLKIRD 1129

Query: 52   ---HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
                +L      +   E +     AA   +    +  +    K++
Sbjct: 1130 DKYRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVV 1174


>gi|320161077|ref|YP_004174301.1| hypothetical protein ANT_16750 [Anaerolinea thermophila UNI-1]
 gi|319994930|dbj|BAJ63701.1| hypothetical protein ANT_16750 [Anaerolinea thermophila UNI-1]
          Length = 127

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 24/123 (19%)

Query: 101 SSYAYQGERDSSQHLFLDS----LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           S+     ER +     +      ++++  +   PD  I LD+   + LKR +  ++  E 
Sbjct: 21  STLIRNLERHNIPARHIAQEHSYVEDMWQRLTHPDVLIFLDVSYPVSLKRRKFNWTEEE- 79

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216
               Y E++  + H +    F  +               + + V       V+E +QK  
Sbjct: 80  ----YLEQQRRLRHARAHCHFYLLTDPY-----------TEEQVFQQ----VYEFLQKHF 120

Query: 217 SPL 219
             L
Sbjct: 121 PLL 123


>gi|302663024|ref|XP_003023160.1| hypothetical protein TRV_02682 [Trichophyton verrucosum HKI 0517]
 gi|291187142|gb|EFE42542.1| hypothetical protein TRV_02682 [Trichophyton verrucosum HKI 0517]
          Length = 1596

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 1    MNSGLFISFE------GIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAAR- 51
            M  G  ++ E      G+ G GKTT I+ + R L  +   V +T              R 
Sbjct: 1075 MAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAVDNILLKIRD 1134

Query: 52   ---HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
                +L      +   E +     AA   +    +  +    K++
Sbjct: 1135 DKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVV 1179


>gi|302502578|ref|XP_003013253.1| hypothetical protein ARB_00438 [Arthroderma benhamiae CBS 112371]
 gi|291176816|gb|EFE32613.1| hypothetical protein ARB_00438 [Arthroderma benhamiae CBS 112371]
          Length = 1597

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 1    MNSGLFISFE------GIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAAR- 51
            M  G  ++ E      G+ G GKTT I+ + R L  +   V +T              R 
Sbjct: 1076 MAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAVDNILLKIRD 1135

Query: 52   ---HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
                +L      +   E +     AA   +    +  +    K++
Sbjct: 1136 DKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVV 1180


>gi|317131420|ref|YP_004090734.1| ABC transporter transmembrane region [Ethanoligenens harbinense
           YUAN-3]
 gi|315469399|gb|ADU26003.1| ABC transporter transmembrane region [Ethanoligenens harbinense
           YUAN-3]
          Length = 764

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TRE 40
             G  I+  G  GAGKTT ++LL RF + K   +      TRE
Sbjct: 543 KKGDTIAIVGPTGAGKTTLVNLLMRFYEIKGGKITFDGVDTRE 585


>gi|258625061|ref|ZP_05719981.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258582657|gb|EEW07486.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 558

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ EG  GAGK+T ++ L   L+          E GG    E     L            
Sbjct: 369 ITIEGESGAGKSTLLATLLGELEA---------EAGGWFINEQLIANLDDESRSH----- 414

Query: 67  EAIVFAAARLDHV 79
               F A+   HV
Sbjct: 415 ----FIASVDQHV 423


>gi|218682680|ref|ZP_03530281.1| alpha-glucoside ABC transporter, ATP-binding protein [Rhizobium
          etli CIAT 894]
          Length = 232

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|218185547|gb|EEC67974.1| hypothetical protein OsI_35734 [Oryza sativa Indica Group]
          Length = 530

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA---EAEAIVF 71
           +GK+T   ++   L+ +   V VT+E        +   ++     +       + E ++ 
Sbjct: 103 SGKSTVCKMIIDQLRDQ-RVVVVTQE--SFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 159

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISVQEV 128
               L H + V  P                S A   + + S  + L+ +    +  V+++
Sbjct: 160 CMENLKHGKAVDIPNYNFK--------TYKSVASARKVNPSDVIILEGILVFHDSRVRDL 211

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           M +  I +D   D+ L R   R ++ +   +
Sbjct: 212 M-NMKIFVDTDADVRLTRRIRRDTIEKGRDI 241


>gi|217077937|ref|YP_002335655.1| signal recognition particle-docking protein FtsY [Thermosipho
           africanus TCF52B]
 gi|217037792|gb|ACJ76314.1| signal recognition particle-docking protein FtsY [Thermosipho
           africanus TCF52B]
          Length = 294

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 14/115 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GKTT    L  +  +    V +      T  A A     L    +   +   A  
Sbjct: 99  GVNGSGKTTTAGKLAEYFSKSGKSVVLAA--CDTFRAAAIDQ--LKVWAERTSSTFIAHQ 154

Query: 71  FAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       + +  A+  E  I++ D            R  ++   ++ L++I+
Sbjct: 155 EGADSAAVAFDAVSHAISKEKDIVILD---------TAGRLHTKKNLMEELRKIN 200


>gi|198475471|ref|XP_002132927.1| GA26088 [Drosophila pseudoobscura pseudoobscura]
 gi|198138838|gb|EDY70329.1| GA26088 [Drosophila pseudoobscura pseudoobscura]
          Length = 2043

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +   G  G GK+T ++LL++ L        VH       +      R   L     ++  
Sbjct: 1944 VVLVGPPGCGKSTIMALLRQALTSSGMQLRVHTISPKSMSRVQLLGR---LDADTRQWQD 2000

Query: 65   EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                +   A     V     PA      ++CD              S    ++++L  +
Sbjct: 2001 G--VLTHTA-----VAVNQEPA-QVHSWIVCD-------------GSIDPEWIEALNSV 2038


>gi|170700162|ref|ZP_02891181.1| sulfate adenylyltransferase, large subunit [Burkholderia ambifaria
           IOP40-10]
 gi|170134937|gb|EDT03246.1| sulfate adenylyltransferase, large subunit [Burkholderia ambifaria
           IOP40-10]
          Length = 637

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 45/162 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  +L++R L       +                 LL       G   +   
Sbjct: 472 GLSGAGKSTIANLVERRLHALGKHTY-----------------LLDGDNVRHGLNRDLGF 514

Query: 71  FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
             A R++    V  V R  L  G +        +  ++     + +        +++   
Sbjct: 515 TEADRVENIRRVAEVARLMLDAGLV--------TLVSFISPFRAER--------DMARAL 558

Query: 128 VMPD--CTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
           V PD    + +D P+ I  +R          R  L+    +D
Sbjct: 559 VGPDEFVEVFVDTPLAIAEERDPKGLYKKARRGELKHFTGID 600


>gi|168178470|ref|ZP_02613134.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           NCTC 2916]
 gi|182671443|gb|EDT83417.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           NCTC 2916]
          Length = 571

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M  G   +  G  G+GK+T + L+ RF   +   V + +E
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKE 395


>gi|158423947|ref|YP_001525239.1| hypothetical protein AZC_2323 [Azorhizobium caulinodans ORS 571]
 gi|158330836|dbj|BAF88321.1| adenylate kinase [Azorhizobium caulinodans ORS 571]
          Length = 183

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 65/220 (29%), Gaps = 68/220 (30%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  G+G +T  + +   L  ++ D          P     R V             
Sbjct: 4   IHITGASGSGTSTLGAAVAEVLGIRHLDTDRFFWMPTEPPFTTPREV------------- 50

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                 +ARL  ++    P +     +L                 S   +   L+ +   
Sbjct: 51  ------SARLALLQQEALPDV---GWVLS---------------GSALKWATPLEPLY-- 84

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-- 184
               D  + L L   + ++R++ R   R    +    R    + E   + FL+ A +   
Sbjct: 85  ----DLIVFLHLDPAVRMERIRLREEQRYGERI----RPGGDMAE-VSRAFLEWAESYDT 135

Query: 185 --PDR----------------CHIVDSAHSFQSVATNILN 206
             P+R                   +DS    +++   +L+
Sbjct: 136 AGPERRSRAAHEDWLQRQSAPVLRLDSVEPVEALLAAVLD 175


>gi|148379042|ref|YP_001253583.1| ABC transporter ATP-binding protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932478|ref|YP_001383423.1| ABC transport ATP-binding/permease protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|153937116|ref|YP_001386970.1| ABC transport ATP-binding/permease protein [Clostridium botulinum A
           str. Hall]
 gi|148288526|emb|CAL82605.1| composite ABC transporter, ATP-binding/permease protein
           [Clostridium botulinum A str. ATCC 3502]
 gi|152928522|gb|ABS34022.1| ABC transport ATP-binding/permease protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|152933030|gb|ABS38529.1| ABC transport ATP-binding/permease protein [Clostridium botulinum A
           str. Hall]
          Length = 571

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M  G   +  G  G+GK+T + L+ RF   +   V + +E
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKE 395


>gi|146318194|ref|YP_001197906.1| ABC-type multidrug transport system, ATPase component
           [Streptococcus suis 05ZYH33]
 gi|253751376|ref|YP_003024517.1| ABC transporter ATP-binding protein [Streptococcus suis SC84]
 gi|253753277|ref|YP_003026417.1| ABC transporter ATP-binding protein [Streptococcus suis P1/7]
 gi|253755892|ref|YP_003029032.1| ABC transporter ATP-binding protein [Streptococcus suis BM407]
 gi|145689000|gb|ABP89506.1| ABC-type multidrug transport system, ATPase component
           [Streptococcus suis 05ZYH33]
 gi|251815665|emb|CAZ51253.1| ABC transporter ATP-binding protein [Streptococcus suis SC84]
 gi|251818356|emb|CAZ56180.1| ABC transporter ATP-binding protein [Streptococcus suis BM407]
 gi|251819522|emb|CAR45101.1| ABC transporter ATP-binding protein [Streptococcus suis P1/7]
 gi|292557995|gb|ADE30996.1| ABC-type multidrug transport system, ATPase component
           [Streptococcus suis GZ1]
 gi|319757662|gb|ADV69604.1| ABC-type multidrug transport system, ATPase component
           [Streptococcus suis JS14]
          Length = 235

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 27/87 (31%), Gaps = 8/87 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLS 56
           + +G  I   G  G+GKTT I L+   LQ +   V               +       L 
Sbjct: 30  LAAGKIIGLLGPNGSGKTTMIKLINGLLQPEYGQVLINGRTPSPETKAIVSYLPDTTYLD 89

Query: 57  CGVDEFGAEAEAIVFAAA----RLDHV 79
             +    A      F A     R  H+
Sbjct: 90  EHMKVLEAVTFFEDFYADFDKERALHL 116


>gi|270208597|ref|YP_003329368.1| hypothetical protein pSmeSM11ap070 [Sinorhizobium meliloti]
 gi|76880871|gb|ABA56041.1| hypothetical protein [Sinorhizobium meliloti]
          Length = 743

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRK 31
          G+ I  EG  G+GKT+ ++ LK+ L  +
Sbjct: 44 GMVIGIEGPWGSGKTSLLNFLKKQLASR 71


>gi|71893699|ref|YP_279145.1| hypothetical protein MHJ_0346 [Mycoplasma hyopneumoniae J]
 gi|71851826|gb|AAZ44434.1| conserved hypothetical protein [Mycoplasma hyopneumoniae J]
          Length = 446

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 13/86 (15%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTRE---------PGGTPAAEAARHVLLSCGVDEFGA 64
           G+GKTT +  +++F     Y V  T E                +  R   ++  +     
Sbjct: 275 GSGKTTFLKKVEKF----GYSVLYTDEFFHNCYLASGECFKIIKKIRPDFINENIVNKNK 330

Query: 65  EAEAIVFAAARLDHVENVIRPALMEG 90
               ++ +    D +E  I P L   
Sbjct: 331 IRNFMLKSKQNRDLIEKSIYPFLENH 356


>gi|115445501|ref|NP_001046530.1| Os02g0273000 [Oryza sativa Japonica Group]
 gi|47848037|dbj|BAD21822.1| putative uracil phosphoribosyltransferase [Oryza sativa Japonica
           Group]
 gi|50252285|dbj|BAD28290.1| putative uracil phosphoribosyltransferase [Oryza sativa Japonica
           Group]
 gi|113536061|dbj|BAF08444.1| Os02g0273000 [Oryza sativa Japonica Group]
 gi|215678610|dbj|BAG92265.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218190467|gb|EEC72894.1| hypothetical protein OsI_06715 [Oryza sativa Indica Group]
 gi|222622581|gb|EEE56713.1| hypothetical protein OsJ_06214 [Oryza sativa Japonica Group]
          Length = 489

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA---EAEAIVF 71
           +GK+T   ++   L+ +   V VT+E        +   ++     +       + E ++ 
Sbjct: 62  SGKSTVCKMIIDQLRDQ-RVVVVTQE--SFYYGLSDEELVHVHDYNFDHPDAFDTELLLS 118

Query: 72  AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISVQEV 128
               L H + V  P                S A   + + S  + L+ +    +  V+++
Sbjct: 119 CMENLKHGKAVDIPNYNFK--------TYKSVASARKVNPSDVIILEGILVFHDSRVRDL 170

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
           M +  I +D   D+ L R   R ++ +   +
Sbjct: 171 M-NMKIFVDTDADVRLTRRIRRDTIEKGRDI 200


>gi|75760956|ref|ZP_00740964.1| Cobalt transport ATP-binding protein cbiO [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74491564|gb|EAO54772.1| Cobalt transport ATP-binding protein cbiO [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 553

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 8/96 (8%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKN-------YDVHVTREPGGTPAAEAARHVL 54
             G FI+  G  G+GKTT +   K+ L           Y+  +  E     +A+    V 
Sbjct: 32  QKGEFIALAGGSGSGKTTLLKHFKKELLPIGTRSGEIFYEGVLIEEVANLLSAQEIGMVF 91

Query: 55  LSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALME 89
            +           + + F+   +    ++I+  + E
Sbjct: 92  QNPENQIVMDTVIQELAFSLENIGLPSHIIQKRIAE 127


>gi|330859402|emb|CBX69747.1| hypothetical protein YEW_GJ27330 [Yersinia enterocolitica W22703]
          Length = 235

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|324112485|gb|EGC06462.1| dephospho-CoA kinase [Escherichia fergusonii B253]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 36/81 (44%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R   L +A +      ++D
Sbjct: 127 VLVIDVTPETQLKRTMRRDDVTREHV------EQILAAQATRDARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++ ++  + +Q
Sbjct: 175 NNGTADAIASDVAHLHAKYLQ 195


>gi|319794459|ref|YP_004156099.1| ABC transporter [Variovorax paradoxus EPS]
 gi|315596922|gb|ADU37988.1| ABC transporter related protein [Variovorax paradoxus EPS]
          Length = 261

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---------DE 61
           G  GAGKTT ++++  +L+    ++ +    G +    + R ++               E
Sbjct: 39  GTNGAGKTTFLNMVTGYLRPTGGEILL---DGRSTLGRSPRELVAHGMARSFQVPQLFPE 95

Query: 62  FGAEAEAIVFAAARLD 77
                E ++FA A  D
Sbjct: 96  MTVR-EHLLFALALAD 110


>gi|301155706|emb|CBW15174.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 253

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 13/121 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHV-LLSCGVD 60
           +G   SF G  GAGK+T +S++ R L   + ++++  E      +++ A+ + +L    +
Sbjct: 27  TGKITSFIGPNGAGKSTVLSIMSRLLNADSGEIYLNGELLNRKKSSDIAKQLAILKQTNN 86

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDS 119
                    + A  R             +G +   DR F+D++ AY    D  +H ++D+
Sbjct: 87  INLRLTIEDLVAFGRF---------PYSKGNLTQTDRTFIDNAIAYMNL-DDIRHQYIDN 136

Query: 120 L 120
           L
Sbjct: 137 L 137


>gi|302691902|ref|XP_003035630.1| hypothetical protein SCHCODRAFT_73924 [Schizophyllum commune H4-8]
 gi|300109326|gb|EFJ00728.1| hypothetical protein SCHCODRAFT_73924 [Schizophyllum commune H4-8]
          Length = 239

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 80/227 (35%), Gaps = 46/227 (20%)

Query: 5   LFISFEGIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVL 54
           + +   G+ G    GK+T   LL+     +   +       EPG        +     +L
Sbjct: 1   MLVV--GLTGGIATGKSTVSKLLRDADIPIVDADVLARQVVEPGTPALKRIVKAFGPQIL 58

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERD--- 110
           L  G     A  E I   A +   +  ++ PA+         R+    + A         
Sbjct: 59  LEDGSLNRKALGEIIFNDAEKRKVLNGIVHPAV---------RWAMVRAIARAWLTGKRV 109

Query: 111 --SSQHLFLDS-LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
             +   L ++S +     Q      T+++  P D+ L+R+  R    E A       + +
Sbjct: 110 CVTDVPLLIESGIWRFVGQ------TVVVSCPFDVQLERLMLRDQSTEEAARARINAQ-M 162

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
            + EK    + D          ++D++ + +++   +  ++ +  ++
Sbjct: 163 SMAEKV--AYAD---------VVLDNSTTPEALRAQVEELLQQWRKQ 198


>gi|331648474|ref|ZP_08349562.1| adenylyl-sulfate kinase [Escherichia coli M605]
 gi|281179756|dbj|BAI56086.1| adenosine 5'-phosphosulfate kinase [Escherichia coli SE15]
 gi|331042221|gb|EGI14363.1| adenylyl-sulfate kinase [Escherichia coli M605]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|289192178|ref|YP_003458119.1| AAA ATPase [Methanocaldococcus sp. FS406-22]
 gi|288938628|gb|ADC69383.1| AAA ATPase [Methanocaldococcus sp. FS406-22]
          Length = 1041

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 9/75 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV---------TREPGGTPAAEAARHVLLSCGVDE 61
           G+ G GKTT    +   L+R+   V            +        E  R + L      
Sbjct: 33  GLAGMGKTTTARYIYTKLRREGVKVVYLTSDEESKTIKFKVTRDEEEEIRCISLKHVWSG 92

Query: 62  FGAEAEAIVFAAARL 76
            G EAE + +A A+ 
Sbjct: 93  KGDEAEVLAYAIAKA 107


>gi|295688146|ref|YP_003591839.1| aminoglycoside phosphotransferase [Caulobacter segnis ATCC 21756]
 gi|295430049|gb|ADG09221.1| aminoglycoside phosphotransferase [Caulobacter segnis ATCC 21756]
          Length = 499

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 51/154 (33%), Gaps = 21/154 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEAEAI 69
           G+ G+GK+T   +    L      V +          +  R  L     ++    EA   
Sbjct: 333 GLSGSGKSTFSRVCAPGLGAAPGAVVL--------RTDEIRKRLWGVPSLERLPREAYTP 384

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             +A   D + +     L  G+ ++ D        +    + ++   L    +++ Q   
Sbjct: 385 EMSARTYDQLFHDAALCLKAGRSVVLD------AVFLKPEERARAEALAQTCDVAFQGA- 437

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                 L+ P ++   RV  R +    A +   E
Sbjct: 438 -----WLEAPPEVLRARVAARVNDASDADVAVLE 466


>gi|259503700|ref|ZP_05746602.1| multidrug resistance ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus antri DSM
           16041]
 gi|259168332|gb|EEW52827.1| multidrug resistance ABC superfamily ATP binding cassette
           transporter, membrane protein [Lactobacillus antri DSM
           16041]
          Length = 611

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           ++  G  GAGKTT I+LL+RF + +   +++  +   +   +  R 
Sbjct: 399 VAIVGPTGAGKTTIINLLERFYEVQGGHIYLDGQDTRSMTRDDLRK 444


>gi|253682346|ref|ZP_04863143.1| ABC transporter, ATP-binding protein [Clostridium botulinum D
          str. 1873]
 gi|253562058|gb|EES91510.1| ABC transporter, ATP-binding protein [Clostridium botulinum D
          str. 1873]
          Length = 254

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G FIS  G  G GK+T ++++   L     +V +
Sbjct: 32 RGDFISIVGPSGCGKSTVLNIIAGLLTPSKGEVLI 66


>gi|261415969|ref|YP_003249652.1| signal recognition particle-docking protein FtsY [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261372425|gb|ACX75170.1| signal recognition particle-docking protein FtsY [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302325501|gb|ADL24702.1| signal recognition particle-docking protein FtsY [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 306

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L   L+ +   V +
Sbjct: 105 GVNGAGKTTTIGKLAARLKNEGKKVMI 131


>gi|238916859|ref|YP_002930376.1| cytidylate kinase [Eubacterium eligens ATCC 27750]
 gi|238872219|gb|ACR71929.1| cytidylate kinase [Eubacterium eligens ATCC 27750]
          Length = 223

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T   LL + L
Sbjct: 4  IAIDGPAGAGKSTIAKLLAKQL 25


>gi|226328278|ref|ZP_03803796.1| hypothetical protein PROPEN_02172 [Proteus penneri ATCC 35198]
 gi|225203011|gb|EEG85365.1| hypothetical protein PROPEN_02172 [Proteus penneri ATCC 35198]
          Length = 320

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
           +G FI   G  G+GK+T   L++RF
Sbjct: 107 AGKFIGITGPSGSGKSTITRLIQRF 131


>gi|254500748|ref|ZP_05112899.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
 gi|222436819|gb|EEE43498.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
          Length = 308

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 28/154 (18%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLL 55
            G+   F G  G GKTT I +L   L       +     V    E          +   L
Sbjct: 30  RGMIYGFLGPNGCGKTTAIRMLTGLLTPTQGSVEVLGLSVPKDAEALKYKIGYMTQAFSL 89

Query: 56  SCGVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSS 112
              +           V+   R    E +           + DR+  +     + G+    
Sbjct: 90  YGDLTVLENLNFMGTVYGLTRAQRKERIAE---------VMDRYELTQLGDRFAGKMSGG 140

Query: 113 QHLFLDSLQEISVQEVMPDCTIILD-----LPVD 141
           Q   L +L    +    P   + LD     +  +
Sbjct: 141 QRQRL-ALAAAVLHG--PQL-LFLDEPTSAVDPE 170


>gi|189212170|ref|XP_001942410.1| lipid A export ATP-binding/permease protein msbA [Pyrenophora
            tritici-repentis Pt-1C-BFP]
 gi|187979609|gb|EDU46235.1| lipid A export ATP-binding/permease protein msbA [Pyrenophora
            tritici-repentis Pt-1C-BFP]
          Length = 1284

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRF 27
             G FI+  G  G GK+T ISLL+RF
Sbjct: 1056 KGQFIALVGASGCGKSTIISLLERF 1080


>gi|187778958|ref|ZP_02995431.1| hypothetical protein CLOSPO_02553 [Clostridium sporogenes ATCC
           15579]
 gi|187772583|gb|EDU36385.1| hypothetical protein CLOSPO_02553 [Clostridium sporogenes ATCC
           15579]
          Length = 449

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 22/138 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L   L+++N    +       PAA     V+   +   V   G +  
Sbjct: 108 GLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLS 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            +  + A ++H +N       +  +++ D            R       +D L  I  +E
Sbjct: 168 PVDISKAAIEHAKN------NKNNVVIID---------TAGRLHIDEELMDELHNI-KEE 211

Query: 128 VMPDCT-IILDLPVDIGL 144
           V P  T I+L +    G 
Sbjct: 212 VNP--TEILLVVDAMTGQ 227


>gi|170756732|ref|YP_001780686.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           B1 str. Okra]
 gi|169121944|gb|ACA45780.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           B1 str. Okra]
          Length = 571

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M  G   +  G  G+GK+T + L+ RF   +   V + +E
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKE 395


>gi|154492770|ref|ZP_02032396.1| hypothetical protein PARMER_02409 [Parabacteroides merdae ATCC
          43184]
 gi|154087075|gb|EDN86120.1| hypothetical protein PARMER_02409 [Parabacteroides merdae ATCC
          43184]
          Length = 468

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|189425345|ref|YP_001952522.1| guanylate kinase [Geobacter lovleyi SZ]
 gi|189421604|gb|ACD96002.1| Guanylate kinase [Geobacter lovleyi SZ]
          Length = 202

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41
          GL I      GAGKTT  + L          V + TR+P
Sbjct: 5  GLLIVISAPSGAGKTTLCNGLVSRFPALKESVSYTTRQP 43


>gi|90417295|ref|ZP_01225221.1| shikimate kinase [marine gamma proteobacterium HTCC2207]
 gi|90330880|gb|EAS46143.1| shikimate kinase [marine gamma proteobacterium HTCC2207]
          Length = 222

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 45/210 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ GAGK+T   LL + L     D   T            + +L            
Sbjct: 58  IVLIGMPGAGKSTLGILLAKEL---GLDFVDTDIAIQVREGRTLQEILDGSDYLHLREIE 114

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E ++ +               + GK++             G         +  L+  +  
Sbjct: 115 EQVLLSQD-------------IAGKVVAT-----------GGSAVYSEPGMARLKHNAT- 149

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186
                  + LD+P+    +R+ N  S   +   +  +  + +  E+       + +   D
Sbjct: 150 ------VVFLDVPLRELRQRIGNFDSRGIARKPN--QSLESLFEERC-----ALYKKYGD 196

Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQKRV 216
               VD     QS+   + +++ +L + RV
Sbjct: 197 --IRVDCDQ--QSLQQTLDSVLQQLSEYRV 222


>gi|22023147|gb|AAM88937.1|AF311739_2 RepA [Rhizobium etli]
          Length = 410

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GKTT  + L ++L  + Y V           +           + E    +   ++AA
Sbjct: 137 GSGKTTTSAHLAQYLALQGYRVLAVDXDPQASLSALL------GVLPELDVASNQTLYAA 190

Query: 74  ARLDH----VENVIRPALMEG 90
            R D     +  VIR    +G
Sbjct: 191 IRYDSERRNLSEVIRSTYFDG 211


>gi|71082782|ref|YP_265501.1| type II secretion PilT [Candidatus Pelagibacter ubique HTCC1062]
 gi|91762795|ref|ZP_01264760.1| Type II Secretion PilT [Candidatus Pelagibacter ubique HTCC1002]
 gi|71061895|gb|AAZ20898.1| Type II Secretion PilT [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718597|gb|EAS85247.1| Type II Secretion PilT [Candidatus Pelagibacter ubique HTCC1002]
          Length = 337

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 1   MNSGL-FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           M+ GL  ++  G  G+GK+T ++ +   + +      +T E       +  + ++    V
Sbjct: 120 MHKGLVLVT--GPTGSGKSTTLAAIVNEINKTRTSNIITVEDPVEFIHKDLKSIVSHREV 177

Query: 60  DEFGAEAEAIVFAAARLD 77
            +      + + AA R D
Sbjct: 178 GKQTKTFSSALKAALRED 195


>gi|34558458|ref|NP_908273.1| adenylylsulfate kinase [Wolinella succinogenes DSM 1740]
 gi|34484177|emb|CAE11173.1| POSSIBLE ADENYLYLSULFATE KINASE [Wolinella succinogenes]
          Length = 179

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 13/83 (15%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I   G+ G+GKTT    +   L+R+   V            +  R +    G D  
Sbjct: 9  QGWVIWITGLAGSGKTTLGRAVYEALRREISHVVYL-------DGDGFREIFGHSGYDRE 61

Query: 63 G------AEAEAIVFAAARLDHV 79
                   +    F A++  HV
Sbjct: 62 SRIEISKKRSALCAFLASQGIHV 84


>gi|21244162|ref|NP_643744.1| adenylate kinase [Xanthomonas axonopodis pv. citri str. 306]
 gi|78049109|ref|YP_365284.1| adenylate kinase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|294627150|ref|ZP_06705738.1| adenylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294666198|ref|ZP_06731452.1| adenylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|24418465|sp|Q8PH23|KAD_XANAC RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|123584262|sp|Q3BPM9|KAD_XANC5 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|21109795|gb|AAM38280.1| adenylate kinase [Xanthomonas axonopodis pv. citri str. 306]
 gi|78037539|emb|CAJ25284.1| adenylate kinase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|292598583|gb|EFF42732.1| adenylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292604016|gb|EFF47413.1| adenylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 187

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 69/208 (33%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T +       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQATRLKD-----------TFDIPHISTGDLLRAEVAAGSPLGLKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  +   +   G   +      ++L E+  + 
Sbjct: 52  ----VMARGDLVSDDILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALDELLGKI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLARVDGVGSLDEVLERISKAL 185


>gi|332095393|gb|EGJ00416.1| dephospho-CoA kinase [Shigella boydii 5216-82]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|326331998|ref|ZP_08198283.1| adenylyl-sulfate kinase superfamily [Nocardioidaceae bacterium
           Broad-1]
 gi|325950136|gb|EGD42191.1| adenylyl-sulfate kinase superfamily [Nocardioidaceae bacterium
           Broad-1]
          Length = 395

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
            GL I F G+ G+GK+T    L   +  +      +
Sbjct: 216 QGLVIFFTGLSGSGKSTLARALMDRILEQGARTVTS 251


>gi|325289504|ref|YP_004265685.1| Taurine-transporting ATPase [Syntrophobotulus glycolicus DSM
          8271]
 gi|324964905|gb|ADY55684.1| Taurine-transporting ATPase [Syntrophobotulus glycolicus DSM
          8271]
          Length = 256

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G FIS  G  G GKTT + ++   L
Sbjct: 36 GEFISLLGPSGCGKTTLLRIIADLL 60


>gi|310821750|ref|YP_003954108.1| cytidylate kinase [Stigmatella aurantiaca DW4/3-1]
 gi|309394822|gb|ADO72281.1| Cytidylate kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 230

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFL 28
          M+S  FI   +G  GAGK+T   LL R L
Sbjct: 1  MSSRPFIVAIDGPAGAGKSTVSKLLARRL 29


>gi|266621116|ref|ZP_06114051.1| ABC transporter, permease/ATP-binding protein [Clostridium
           hathewayi DSM 13479]
 gi|288867238|gb|EFC99536.1| ABC transporter, permease/ATP-binding protein [Clostridium
           hathewayi DSM 13479]
          Length = 605

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/24 (58%), Positives = 16/24 (66%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF 27
           G  I+  G  GAGKTT I+LL RF
Sbjct: 394 GKLIAVVGPTGAGKTTLINLLMRF 417


>gi|260581081|ref|ZP_05848902.1| cytidylate kinase [Haemophilus influenzae RdAW]
 gi|260092210|gb|EEW76152.1| cytidylate kinase [Haemophilus influenzae RdAW]
          Length = 191

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 30 GMIITVDGPSGAGKGTLCYALAEKL 54


>gi|260469764|ref|ZP_05813922.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259028447|gb|EEW29765.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 627

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 24/52 (46%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +G  I+  G  GAGK+T   LL RF   +   V +  +       E+ R VL
Sbjct: 386 AGKTIAIVGPSGAGKSTISRLLFRFYDVQGGQVLIDGQDIRDVTQESLRAVL 437


>gi|254821268|ref|ZP_05226269.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium intracellulare ATCC 13950]
          Length = 613

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 20/95 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  + F G+ G+GK++   L+++ L  K    +                 +L       
Sbjct: 441 RGKTVWFTGLSGSGKSSVAMLVEQKLLEKGSLAY-----------------VLDGDNLRH 483

Query: 63  GAEAEAIVFAAARLDHVENVIRPA--LME-GKILL 94
           G  A+     A R +++  +   A  L + G ++L
Sbjct: 484 GLNADLGFSMADRAENLRRLAHVAALLADCGNVVL 518


>gi|238809476|dbj|BAH69266.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 465

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++  G  G+GKTT + L+ 
Sbjct: 41 INKGEFVTLLGPSGSGKTTILRLIA 65


>gi|229825932|ref|ZP_04452001.1| hypothetical protein GCWU000182_01296 [Abiotrophia defectiva ATCC
           49176]
 gi|229789952|gb|EEP26066.1| hypothetical protein GCWU000182_01296 [Abiotrophia defectiva ATCC
           49176]
          Length = 580

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           N G  ++F G  G+GKTT I+L+ RF      +V V
Sbjct: 363 NKGEMVAFIGATGSGKTTLINLIPRFYDATGGEVLV 398


>gi|258406316|ref|YP_003199058.1| cytidylate kinase [Desulfohalobium retbaense DSM 5692]
 gi|257798543|gb|ACV69480.1| cytidylate kinase [Desulfohalobium retbaense DSM 5692]
          Length = 233

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
             L ++ +G  GAGK+T    +   L+
Sbjct: 4  KRPLIVTLDGPAGAGKSTVAKAVADALE 31


>gi|227356382|ref|ZP_03840770.1| peptide-transporting ATPase [Proteus mirabilis ATCC 29906]
 gi|227163492|gb|EEI48413.1| peptide-transporting ATPase [Proteus mirabilis ATCC 29906]
          Length = 707

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
           +G FI   G  G+GK+T   L++RF
Sbjct: 494 AGKFIGITGPSGSGKSTITRLIQRF 518


>gi|227114072|ref|ZP_03827728.1| adenylylsulfate kinase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 205

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ I F G+ G+GK+T    L++ L ++    +                 LL      
Sbjct: 30  HQGVVIWFTGLSGSGKSTLAGALEQALHQRGVSTY-----------------LLDGDNVR 72

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +       R +++     V +  +  G ++L 
Sbjct: 73  HGLCRDLGFTDDDRRENIRRVGEVAKLMVDAGLVVLT 109


>gi|218698524|ref|YP_002406153.1| dephospho-CoA kinase [Escherichia coli IAI39]
 gi|218368510|emb|CAR16245.1| dephospho-CoA kinase [Escherichia coli IAI39]
 gi|222031933|emb|CAP74671.1| Dephospho-CoA kinase [Escherichia coli LF82]
 gi|312944708|gb|ADR25535.1| dephospho-CoA kinase [Escherichia coli O83:H1 str. NRG 857C]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|154505308|ref|ZP_02042046.1| hypothetical protein RUMGNA_02822 [Ruminococcus gnavus ATCC 29149]
 gi|153794351|gb|EDN76771.1| hypothetical protein RUMGNA_02822 [Ruminococcus gnavus ATCC 29149]
          Length = 212

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 28/171 (16%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSC 57
           MN  G+ I   G  GAGK T +  L +  +          TR P              + 
Sbjct: 1   MNQRGILIVVSGFSGAGKGTLMKELMKRYEETYALSVSATTRNPREGEVDGREYFFKTTE 60

Query: 58  GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
             ++  A+ E I +A    ++       +   L  GK ++ +         QG       
Sbjct: 61  EFEKMIAKEELIEYARYVENYYGTPRTYVEQQLEAGKDVILE------IEIQGA------ 108

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                   + V+E  PD T++L +      + ++ R   R +  ++  E +
Sbjct: 109 --------LKVKERFPD-TLLLFVTPPSAKE-LRRRLVGRGTETMEVIESR 149


>gi|153940940|ref|YP_001390410.1| ABC transport ATP-binding/permease protein [Clostridium botulinum F
           str. Langeland]
 gi|152936836|gb|ABS42334.1| ABC transport ATP-binding/permease protein [Clostridium botulinum F
           str. Langeland]
 gi|295318497|gb|ADF98874.1| ABC transport ATP-binding/permease protein [Clostridium botulinum F
           str. 230613]
          Length = 571

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M  G   +  G  G+GK+T + L+ RF   +   V + +E
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKE 395


>gi|90410238|ref|ZP_01218255.1| glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Photobacterium profundum 3TCK]
 gi|90329591|gb|EAS45848.1| glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Photobacterium profundum 3TCK]
          Length = 354

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F+ F G  G GK+T + ++ 
Sbjct: 26 INNGEFVVFVGPSGCGKSTLLRMIA 50


>gi|145674|gb|AAA23647.1| APS kinase [Escherichia coli]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|56708591|ref|YP_170487.1| hypothetical protein FTT_1564 [Francisella tularensis subsp.
          tularensis SCHU S4]
 gi|89255950|ref|YP_513312.1| hypothetical protein FTL_0544 [Francisella tularensis subsp.
          holarctica LVS]
 gi|110671062|ref|YP_667619.1| hypothetical protein FTF1564 [Francisella tularensis subsp.
          tularensis FSC198]
 gi|115314433|ref|YP_763156.1| hypothetical protein FTH_0546 [Francisella tularensis subsp.
          holarctica OSU18]
 gi|118498044|ref|YP_899094.1| hypothetical protein FTN_1472 [Francisella tularensis subsp.
          novicida U112]
 gi|134301454|ref|YP_001121422.1| hypothetical protein FTW_0363 [Francisella tularensis subsp.
          tularensis WY96-3418]
 gi|156501944|ref|YP_001428009.1| hypothetical protein FTA_0577 [Francisella tularensis subsp.
          holarctica FTNF002-00]
 gi|167009144|ref|ZP_02274075.1| polyphosphate kinase 2 [Francisella tularensis subsp. holarctica
          FSC200]
 gi|187931180|ref|YP_001891164.1| polyphosphate kinase 2 [Francisella tularensis subsp.
          mediasiatica FSC147]
 gi|194323269|ref|ZP_03057053.1| polyphosphate kinase 2 [Francisella tularensis subsp. novicida
          FTE]
 gi|208779546|ref|ZP_03246891.1| polyphosphate kinase 2 [Francisella novicida FTG]
 gi|224457773|ref|ZP_03666246.1| polyphosphate kinase 2 [Francisella tularensis subsp. tularensis
          MA00-2987]
 gi|254367307|ref|ZP_04983333.1| hypothetical protein FTHG_00519 [Francisella tularensis subsp.
          holarctica 257]
 gi|254371222|ref|ZP_04987224.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis FSC033]
 gi|254373399|ref|ZP_04988887.1| conserved hypothetical protein [Francisella tularensis subsp.
          novicida GA99-3549]
 gi|254374862|ref|ZP_04990343.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|254875453|ref|ZP_05248163.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|290954605|ref|ZP_06559226.1| polyphosphate kinase 2 [Francisella tularensis subsp. holarctica
          URFT1]
 gi|295311948|ref|ZP_06802772.1| polyphosphate kinase 2 [Francisella tularensis subsp. holarctica
          URFT1]
 gi|56605083|emb|CAG46197.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis SCHU S4]
 gi|89143781|emb|CAJ78984.1| conserved hypothetical protein [Francisella tularensis subsp.
          holarctica LVS]
 gi|110321395|emb|CAL09580.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis FSC198]
 gi|115129332|gb|ABI82519.1| conserved hypothetical protein [Francisella tularensis subsp.
          holarctica OSU18]
 gi|118423950|gb|ABK90340.1| conserved protein of unknown function [Francisella novicida U112]
 gi|134049231|gb|ABO46302.1| polyphosphate kinase 2 [Francisella tularensis subsp. tularensis
          WY96-3418]
 gi|134253123|gb|EBA52217.1| hypothetical protein FTHG_00519 [Francisella tularensis subsp.
          holarctica 257]
 gi|151569462|gb|EDN35116.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis FSC033]
 gi|151571125|gb|EDN36779.1| conserved hypothetical protein [Francisella novicida GA99-3549]
 gi|151572581|gb|EDN38235.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|156252547|gb|ABU61053.1| polyphosphate kinase 2 [Francisella tularensis subsp. holarctica
          FTNF002-00]
 gi|187712089|gb|ACD30386.1| polyphosphate kinase 2 [Francisella tularensis subsp.
          mediasiatica FSC147]
 gi|194322633|gb|EDX20113.1| polyphosphate kinase 2 [Francisella tularensis subsp. novicida
          FTE]
 gi|208744507|gb|EDZ90806.1| polyphosphate kinase 2 [Francisella novicida FTG]
 gi|254841452|gb|EET19888.1| conserved hypothetical protein [Francisella tularensis subsp.
          tularensis MA00-2987]
 gi|282159819|gb|ADA79210.1| polyphosphate kinase 2 [Francisella tularensis subsp. tularensis
          NE061598]
          Length = 269

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          N  + I FEG + AGK   I  +   L  +   V    +P 
Sbjct: 51 NKKVLIIFEGRDAAGKGGTIKRMMEHLNPRGAKVIALEKPS 91


>gi|268562782|ref|XP_002638665.1| Hypothetical protein CBG11853 [Caenorhabditis briggsae]
          Length = 4523

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 23/113 (20%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
            G  G+GK+T   +L+R L      + VT+           R+ LL     +     + I+
Sbjct: 2507 GAAGSGKSTIWKVLQRALILTKKPLRVTQFNPKA----VNRNKLLGNMDMDTREWTDGII 2562

Query: 71   FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              AAR    +  +         ++CD                   ++++L  +
Sbjct: 2563 TMAAREVQKDTTV------HHWIVCD-------------GDIDPEWVEALNSV 2596


>gi|20094263|ref|NP_614110.1| putative NTPase [Methanopyrus kandleri AV19]
 gi|54036602|sp|Q8TX49|NTPTH_METKA RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase THEP1;
           AltName: Full=Nucleoside triphosphate phosphohydrolase
 gi|19887300|gb|AAM02040.1| Predicted nucleotide kinase [Methanopyrus kandleri AV19]
          Length = 180

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 67/231 (29%), Gaps = 77/231 (33%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           +   G  G GKTT    ++  L+ + Y V     P      E  R +       E     
Sbjct: 5   VVLTGRPGIGKTTVCLKVRNVLEEEGYTVGGIYCP---EIREGGRRI-----GFEIVDLT 56

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
           E                            DR+L +     G R     +F+D+L+  +  
Sbjct: 57  E---------------------------GDRYLLAREGASGPRVGRYGVFVDNLERAA-- 87

Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI----------------- 169
                            ++R   R  +     +   E K                     
Sbjct: 88  ---------------ESIERAVKRTDVVIVDEVGPMELKSNAFVDAVRRAADAHTPAIFV 132

Query: 170 -HEKRRQ-IFLDIARNQPD--RCHIVDSAHS-FQSVATNILNIVWELVQKR 215
            HE+ R  + +D+   +PD  R  +     S    ++  IL  V E +++R
Sbjct: 133 VHERSRHPVVVDLREERPDVVRFRV---TLSNRDELSDRILEHVLEWLEER 180


>gi|194430296|ref|ZP_03062790.1| dephospho-CoA kinase [Escherichia coli B171]
 gi|194411651|gb|EDX27979.1| dephospho-CoA kinase [Escherichia coli B171]
 gi|323160100|gb|EFZ46061.1| dephospho-CoA kinase [Escherichia coli E128010]
          Length = 202

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|170019004|ref|YP_001723958.1| adenylylsulfate kinase [Escherichia coli ATCC 8739]
 gi|188495925|ref|ZP_03003195.1| adenylylsulfate kinase [Escherichia coli 53638]
 gi|254037793|ref|ZP_04871851.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Escherichia sp. 1_1_43]
 gi|256024742|ref|ZP_05438607.1| adenylylsulfate kinase [Escherichia sp. 4_1_40B]
 gi|301645266|ref|ZP_07245217.1| adenylylsulfate kinase [Escherichia coli MS 146-1]
 gi|307139438|ref|ZP_07498794.1| adenylylsulfate kinase [Escherichia coli H736]
 gi|312973039|ref|ZP_07787212.1| adenylylsulfate kinase [Escherichia coli 1827-70]
 gi|331643437|ref|ZP_08344568.1| adenylyl-sulfate kinase [Escherichia coli H736]
 gi|189082722|sp|B1IUS9|CYSC_ECOLC RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|169753932|gb|ACA76631.1| Adenylyl-sulfate kinase [Escherichia coli ATCC 8739]
 gi|188491124|gb|EDU66227.1| adenylylsulfate kinase [Escherichia coli 53638]
 gi|226839417|gb|EEH71438.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Escherichia sp. 1_1_43]
 gi|301076431|gb|EFK91237.1| adenylylsulfate kinase [Escherichia coli MS 146-1]
 gi|309703109|emb|CBJ02441.1| adenosine 5-phosphosulfate kinase [Escherichia coli ETEC H10407]
 gi|310332981|gb|EFQ00195.1| adenylylsulfate kinase [Escherichia coli 1827-70]
 gi|315615139|gb|EFU95776.1| adenylylsulfate kinase [Escherichia coli 3431]
 gi|323935692|gb|EGB32006.1| adenylylsulfate kinase [Escherichia coli E1520]
 gi|323941418|gb|EGB37601.1| adenylylsulfate kinase [Escherichia coli E482]
 gi|331036908|gb|EGI09132.1| adenylyl-sulfate kinase [Escherichia coli H736]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|193071232|ref|ZP_03052153.1| dephospho-CoA kinase [Escherichia coli E110019]
 gi|218552684|ref|YP_002385597.1| dephospho-CoA kinase [Escherichia coli IAI1]
 gi|218693570|ref|YP_002401237.1| dephospho-CoA kinase [Escherichia coli 55989]
 gi|300821893|ref|ZP_07102037.1| dephospho-CoA kinase [Escherichia coli MS 119-7]
 gi|307311447|ref|ZP_07591089.1| dephospho-CoA kinase [Escherichia coli W]
 gi|331680676|ref|ZP_08381335.1| dephospho-CoA kinase [Escherichia coli H591]
 gi|192955442|gb|EDV85924.1| dephospho-CoA kinase [Escherichia coli E110019]
 gi|218350302|emb|CAU95985.1| dephospho-CoA kinase [Escherichia coli 55989]
 gi|218359452|emb|CAQ96990.1| dephospho-CoA kinase [Escherichia coli IAI1]
 gi|300525493|gb|EFK46562.1| dephospho-CoA kinase [Escherichia coli MS 119-7]
 gi|306908426|gb|EFN38924.1| dephospho-CoA kinase [Escherichia coli W]
 gi|315059325|gb|ADT73652.1| dephospho-CoA kinase [Escherichia coli W]
 gi|320179664|gb|EFW54613.1| Dephospho-CoA kinase [Shigella boydii ATCC 9905]
 gi|320200379|gb|EFW74965.1| Dephospho-CoA kinase [Escherichia coli EC4100B]
 gi|323380117|gb|ADX52385.1| dephospho-CoA kinase [Escherichia coli KO11]
 gi|324118452|gb|EGC12346.1| dephospho-CoA kinase [Escherichia coli E1167]
 gi|331072139|gb|EGI43475.1| dephospho-CoA kinase [Escherichia coli H591]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|94310174|ref|YP_583384.1| ABC transporter-related protein [Cupriavidus metallidurans CH34]
 gi|93354026|gb|ABF08115.1| ABC-type branched-chain amino acid transport systems, ATPase
           component [Cupriavidus metallidurans CH34]
          Length = 255

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 8/83 (9%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGK+T I+LL       +  LQ +  DV    +P         R    +       
Sbjct: 42  GTNGAGKSTLINLLSGELPPSEGRLQLQGRDVTGWVQPKLARHG-IGRSYQRNNIFLPLT 100

Query: 64  AEAEAIVFAAARLDHVENVIRPA 86
                 + A +R      +  PA
Sbjct: 101 VRENCRLAAQSRAQRAWRLWEPA 123


>gi|15803267|ref|NP_289299.1| adenylylsulfate kinase [Escherichia coli O157:H7 EDL933]
 gi|15832858|ref|NP_311631.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. Sakai]
 gi|16130657|ref|NP_417230.1| adenosine 5'-phosphosulfate kinase [Escherichia coli str. K-12
           substr. MG1655]
 gi|74313316|ref|YP_311735.1| adenylylsulfate kinase [Shigella sonnei Ss046]
 gi|82545177|ref|YP_409124.1| adenylylsulfate kinase [Shigella boydii Sb227]
 gi|82778117|ref|YP_404466.1| adenylylsulfate kinase [Shigella dysenteriae Sd197]
 gi|89109537|ref|AP_003317.1| adenosine 5'-phosphosulfate kinase [Escherichia coli str. K-12
           substr. W3110]
 gi|110806619|ref|YP_690139.1| adenylylsulfate kinase [Shigella flexneri 5 str. 8401]
 gi|157155510|ref|YP_001464073.1| adenylylsulfate kinase [Escherichia coli E24377A]
 gi|157162198|ref|YP_001459516.1| adenylylsulfate kinase [Escherichia coli HS]
 gi|168749923|ref|ZP_02774945.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4113]
 gi|168755497|ref|ZP_02780504.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4401]
 gi|168762848|ref|ZP_02787855.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4501]
 gi|168768844|ref|ZP_02793851.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4486]
 gi|168774715|ref|ZP_02799722.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4196]
 gi|168778735|ref|ZP_02803742.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4076]
 gi|168788006|ref|ZP_02813013.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC869]
 gi|168800169|ref|ZP_02825176.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC508]
 gi|170082325|ref|YP_001731645.1| adenosine 5'-phosphosulfate kinase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683859|ref|YP_001744900.1| adenylylsulfate kinase [Escherichia coli SMS-3-5]
 gi|191166803|ref|ZP_03028629.1| adenylylsulfate kinase [Escherichia coli B7A]
 gi|193069627|ref|ZP_03050579.1| adenylylsulfate kinase [Escherichia coli E110019]
 gi|194427870|ref|ZP_03060416.1| adenylylsulfate kinase [Escherichia coli B171]
 gi|194438986|ref|ZP_03071070.1| adenylylsulfate kinase [Escherichia coli 101-1]
 gi|195939463|ref|ZP_03084845.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4024]
 gi|208807739|ref|ZP_03250076.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208813420|ref|ZP_03254749.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208818996|ref|ZP_03259316.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209399413|ref|YP_002272213.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4115]
 gi|209920193|ref|YP_002294277.1| adenylylsulfate kinase [Escherichia coli SE11]
 gi|217327328|ref|ZP_03443411.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. TW14588]
 gi|218555297|ref|YP_002388210.1| adenylylsulfate kinase [Escherichia coli IAI1]
 gi|218696348|ref|YP_002404015.1| adenylylsulfate kinase [Escherichia coli 55989]
 gi|218706244|ref|YP_002413763.1| adenylylsulfate kinase [Escherichia coli UMN026]
 gi|238901887|ref|YP_002927683.1| adenosine 5'-phosphosulfate kinase [Escherichia coli BW2952]
 gi|253772394|ref|YP_003035225.1| adenylylsulfate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162681|ref|YP_003045789.1| adenylylsulfate kinase [Escherichia coli B str. REL606]
 gi|254794690|ref|YP_003079527.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. TW14359]
 gi|256019465|ref|ZP_05433330.1| adenylylsulfate kinase [Shigella sp. D9]
 gi|260856861|ref|YP_003230752.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O26:H11 str.
           11368]
 gi|260869429|ref|YP_003235831.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O111:H- str.
           11128]
 gi|261226045|ref|ZP_05940326.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256699|ref|ZP_05949232.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291284077|ref|YP_003500895.1| adenylyl-sulfate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|293406242|ref|ZP_06650168.1| adenylylsulfate kinase [Escherichia coli FVEC1412]
 gi|293412105|ref|ZP_06654828.1| adenylylsulfate kinase [Escherichia coli B354]
 gi|293415996|ref|ZP_06658636.1| adenylylsulfate kinase [Escherichia coli B185]
 gi|293449072|ref|ZP_06663493.1| adenylylsulfate kinase [Escherichia coli B088]
 gi|298381979|ref|ZP_06991576.1| adenylylsulfate kinase [Escherichia coli FVEC1302]
 gi|300815841|ref|ZP_07096065.1| adenylylsulfate kinase [Escherichia coli MS 107-1]
 gi|300820532|ref|ZP_07100683.1| adenylylsulfate kinase [Escherichia coli MS 119-7]
 gi|300899992|ref|ZP_07118195.1| adenylylsulfate kinase [Escherichia coli MS 198-1]
 gi|300906743|ref|ZP_07124425.1| adenylylsulfate kinase [Escherichia coli MS 84-1]
 gi|300919213|ref|ZP_07135736.1| adenylylsulfate kinase [Escherichia coli MS 115-1]
 gi|300922274|ref|ZP_07138400.1| adenylylsulfate kinase [Escherichia coli MS 182-1]
 gi|300930610|ref|ZP_07146002.1| adenylylsulfate kinase [Escherichia coli MS 187-1]
 gi|300946970|ref|ZP_07161196.1| adenylylsulfate kinase [Escherichia coli MS 116-1]
 gi|300954994|ref|ZP_07167405.1| adenylylsulfate kinase [Escherichia coli MS 175-1]
 gi|301027326|ref|ZP_07190667.1| adenylylsulfate kinase [Escherichia coli MS 196-1]
 gi|301306165|ref|ZP_07212241.1| adenylylsulfate kinase [Escherichia coli MS 124-1]
 gi|301326209|ref|ZP_07219592.1| adenylylsulfate kinase [Escherichia coli MS 78-1]
 gi|307312822|ref|ZP_07592452.1| adenylylsulfate kinase [Escherichia coli W]
 gi|309786160|ref|ZP_07680788.1| adenylylsulfate kinase [Shigella dysenteriae 1617]
 gi|309795218|ref|ZP_07689637.1| adenylylsulfate kinase [Escherichia coli MS 145-7]
 gi|331664306|ref|ZP_08365212.1| adenylyl-sulfate kinase [Escherichia coli TA143]
 gi|331669490|ref|ZP_08370336.1| adenylyl-sulfate kinase [Escherichia coli TA271]
 gi|331678731|ref|ZP_08379405.1| adenylyl-sulfate kinase [Escherichia coli H591]
 gi|62288059|sp|P0A6J1|CYSC_ECOLI RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|62288060|sp|P0A6J2|CYSC_ECO57 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|123146791|sp|Q0T1I1|CYSC_SHIF8 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|123558862|sp|Q31XB2|CYSC_SHIBS RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|123561776|sp|Q32CI0|CYSC_SHIDS RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|123616332|sp|Q3YYB2|CYSC_SHISS RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|167011321|sp|A7ZQJ4|CYSC_ECO24 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|167011322|sp|A8A3M9|CYSC_ECOHS RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|226722290|sp|B7LXG2|CYSC_ECO8A RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|226722291|sp|B7N6Y0|CYSC_ECOLU RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|226722292|sp|B1LQ71|CYSC_ECOSM RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|229484858|sp|B1XCS6|CYSC_ECODH RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|238057808|sp|B5Z3B2|CYSC_ECO5E RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|238057809|sp|B6I6E0|CYSC_ECOSE RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|254766501|sp|B7LEG8|CYSC_ECO55 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|259586088|sp|C4ZZQ4|CYSC_ECOBW RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|12517204|gb|AAG57857.1|AE005502_11 adenosine 5'-phosphosulfate kinase [Escherichia coli O157:H7 str.
           EDL933]
 gi|145395|gb|AAA23503.1| adenylylsulfate 3'-phosphotransferase [Escherichia coli]
 gi|882643|gb|AAA69260.1| adenosine 5-phosphosulfate kinase [Escherichia coli str. K-12
           substr. MG1655]
 gi|1789107|gb|AAC75792.1| adenosine 5'-phosphosulfate kinase [Escherichia coli str. K-12
           substr. MG1655]
 gi|13363075|dbj|BAB37027.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O157:H7 str.
           Sakai]
 gi|73856793|gb|AAZ89500.1| adenosine 5'-phosphosulfate kinase [Shigella sonnei Ss046]
 gi|81242265|gb|ABB62975.1| adenosine 5'-phosphosulfate kinase [Shigella dysenteriae Sd197]
 gi|81246588|gb|ABB67296.1| adenosine 5'-phosphosulfate kinase [Shigella boydii Sb227]
 gi|85675571|dbj|BAE76827.1| adenosine 5'-phosphosulfate kinase [Escherichia coli str. K12
           substr. W3110]
 gi|110616167|gb|ABF04834.1| adenosine 5'-phosphosulfate kinase [Shigella flexneri 5 str. 8401]
 gi|157067878|gb|ABV07133.1| adenylylsulfate kinase [Escherichia coli HS]
 gi|157077540|gb|ABV17248.1| adenylylsulfate kinase [Escherichia coli E24377A]
 gi|169890160|gb|ACB03867.1| adenosine 5'-phosphosulfate kinase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170521577|gb|ACB19755.1| adenylylsulfate kinase [Escherichia coli SMS-3-5]
 gi|187769541|gb|EDU33385.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4196]
 gi|188015769|gb|EDU53891.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4113]
 gi|189003551|gb|EDU72537.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4076]
 gi|189357250|gb|EDU75669.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4401]
 gi|189362161|gb|EDU80580.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4486]
 gi|189366908|gb|EDU85324.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4501]
 gi|189372233|gb|EDU90649.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC869]
 gi|189377453|gb|EDU95869.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC508]
 gi|190903174|gb|EDV62897.1| adenylylsulfate kinase [Escherichia coli B7A]
 gi|192956990|gb|EDV87441.1| adenylylsulfate kinase [Escherichia coli E110019]
 gi|194414103|gb|EDX30379.1| adenylylsulfate kinase [Escherichia coli B171]
 gi|194422107|gb|EDX38110.1| adenylylsulfate kinase [Escherichia coli 101-1]
 gi|208727540|gb|EDZ77141.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4206]
 gi|208734697|gb|EDZ83384.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4045]
 gi|208739119|gb|EDZ86801.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4042]
 gi|209160813|gb|ACI38246.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. EC4115]
 gi|209761678|gb|ACI79151.1| adenosine 5'-phosphosulfate kinase [Escherichia coli]
 gi|209761680|gb|ACI79152.1| adenosine 5'-phosphosulfate kinase [Escherichia coli]
 gi|209761682|gb|ACI79153.1| adenosine 5'-phosphosulfate kinase [Escherichia coli]
 gi|209761684|gb|ACI79154.1| adenosine 5'-phosphosulfate kinase [Escherichia coli]
 gi|209761686|gb|ACI79155.1| adenosine 5'-phosphosulfate kinase [Escherichia coli]
 gi|209913452|dbj|BAG78526.1| adenosine 5'-phosphosulfate kinase [Escherichia coli SE11]
 gi|217319695|gb|EEC28120.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. TW14588]
 gi|218353080|emb|CAU98905.1| adenosine 5'-phosphosulfate kinase [Escherichia coli 55989]
 gi|218362065|emb|CAQ99674.1| adenosine 5'-phosphosulfate kinase [Escherichia coli IAI1]
 gi|218433341|emb|CAR14241.1| adenosine 5'-phosphosulfate kinase [Escherichia coli UMN026]
 gi|238859931|gb|ACR61929.1| adenosine 5'-phosphosulfate kinase [Escherichia coli BW2952]
 gi|242378305|emb|CAQ33082.1| adenylylsulfate kinase [Escherichia coli BL21(DE3)]
 gi|253323438|gb|ACT28040.1| adenylylsulfate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974582|gb|ACT40253.1| adenylylsulfate kinase [Escherichia coli B str. REL606]
 gi|253978749|gb|ACT44419.1| adenylylsulfate kinase [Escherichia coli BL21(DE3)]
 gi|254594090|gb|ACT73451.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O157:H7 str.
           TW14359]
 gi|257755510|dbj|BAI27012.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O26:H11 str.
           11368]
 gi|257765785|dbj|BAI37280.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O111:H- str.
           11128]
 gi|260448199|gb|ACX38621.1| Adenylyl-sulfate kinase [Escherichia coli DH1]
 gi|284922686|emb|CBG35774.1| adenosine 5-phosphosulfate kinase [Escherichia coli 042]
 gi|290763950|gb|ADD57911.1| Adenylyl-sulfate kinase [Escherichia coli O55:H7 str. CB9615]
 gi|291322162|gb|EFE61591.1| adenylylsulfate kinase [Escherichia coli B088]
 gi|291426248|gb|EFE99280.1| adenylylsulfate kinase [Escherichia coli FVEC1412]
 gi|291432185|gb|EFF05167.1| adenylylsulfate kinase [Escherichia coli B185]
 gi|291468876|gb|EFF11367.1| adenylylsulfate kinase [Escherichia coli B354]
 gi|298277119|gb|EFI18635.1| adenylylsulfate kinase [Escherichia coli FVEC1302]
 gi|299879319|gb|EFI87530.1| adenylylsulfate kinase [Escherichia coli MS 196-1]
 gi|300318086|gb|EFJ67870.1| adenylylsulfate kinase [Escherichia coli MS 175-1]
 gi|300356501|gb|EFJ72371.1| adenylylsulfate kinase [Escherichia coli MS 198-1]
 gi|300401437|gb|EFJ84975.1| adenylylsulfate kinase [Escherichia coli MS 84-1]
 gi|300413658|gb|EFJ96968.1| adenylylsulfate kinase [Escherichia coli MS 115-1]
 gi|300421404|gb|EFK04715.1| adenylylsulfate kinase [Escherichia coli MS 182-1]
 gi|300453357|gb|EFK16977.1| adenylylsulfate kinase [Escherichia coli MS 116-1]
 gi|300461552|gb|EFK25045.1| adenylylsulfate kinase [Escherichia coli MS 187-1]
 gi|300526796|gb|EFK47865.1| adenylylsulfate kinase [Escherichia coli MS 119-7]
 gi|300531770|gb|EFK52832.1| adenylylsulfate kinase [Escherichia coli MS 107-1]
 gi|300838597|gb|EFK66357.1| adenylylsulfate kinase [Escherichia coli MS 124-1]
 gi|300847054|gb|EFK74814.1| adenylylsulfate kinase [Escherichia coli MS 78-1]
 gi|306907257|gb|EFN37763.1| adenylylsulfate kinase [Escherichia coli W]
 gi|308121189|gb|EFO58451.1| adenylylsulfate kinase [Escherichia coli MS 145-7]
 gi|308925905|gb|EFP71384.1| adenylylsulfate kinase [Shigella dysenteriae 1617]
 gi|315062031|gb|ADT76358.1| adenosine 5'-phosphosulfate kinase [Escherichia coli W]
 gi|315137357|dbj|BAJ44516.1| adenylyl-sulfate kinase [Escherichia coli DH1]
 gi|315254536|gb|EFU34504.1| adenylylsulfate kinase [Escherichia coli MS 85-1]
 gi|320173399|gb|EFW48598.1| Adenylylsulfate kinase [Shigella dysenteriae CDC 74-1112]
 gi|320186533|gb|EFW61261.1| Adenylylsulfate kinase [Shigella flexneri CDC 796-83]
 gi|320189080|gb|EFW63739.1| Adenylylsulfate kinase [Escherichia coli O157:H7 str. EC1212]
 gi|320640394|gb|EFX09933.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. G5101]
 gi|320645940|gb|EFX14921.1| adenylylsulfate kinase [Escherichia coli O157:H- str. 493-89]
 gi|320651240|gb|EFX19675.1| adenylylsulfate kinase [Escherichia coli O157:H- str. H 2687]
 gi|320656790|gb|EFX24678.1| adenylylsulfate kinase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662333|gb|EFX29730.1| adenylylsulfate kinase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667385|gb|EFX34343.1| adenylylsulfate kinase [Escherichia coli O157:H7 str. LSU-61]
 gi|323154974|gb|EFZ41166.1| adenylylsulfate kinase [Escherichia coli EPECa14]
 gi|323159941|gb|EFZ45911.1| adenylylsulfate kinase [Escherichia coli E128010]
 gi|323167232|gb|EFZ52949.1| adenylylsulfate kinase [Shigella sonnei 53G]
 gi|323172955|gb|EFZ58586.1| adenylylsulfate kinase [Escherichia coli LT-68]
 gi|323180176|gb|EFZ65728.1| adenylylsulfate kinase [Escherichia coli 1180]
 gi|323183283|gb|EFZ68680.1| adenylylsulfate kinase [Escherichia coli 1357]
 gi|323377386|gb|ADX49654.1| adenylylsulfate kinase [Escherichia coli KO11]
 gi|323946364|gb|EGB42392.1| adenylylsulfate kinase [Escherichia coli H120]
 gi|323960590|gb|EGB56216.1| adenylylsulfate kinase [Escherichia coli H489]
 gi|323971521|gb|EGB66754.1| adenylylsulfate kinase [Escherichia coli TA007]
 gi|324017022|gb|EGB86241.1| adenylylsulfate kinase [Escherichia coli MS 117-3]
 gi|324120004|gb|EGC13882.1| adenylylsulfate kinase [Escherichia coli E1167]
 gi|326339181|gb|EGD62996.1| Adenylylsulfate kinase [Escherichia coli O157:H7 str. 1044]
 gi|326342936|gb|EGD66704.1| Adenylylsulfate kinase [Escherichia coli O157:H7 str. 1125]
 gi|331058237|gb|EGI30218.1| adenylyl-sulfate kinase [Escherichia coli TA143]
 gi|331063158|gb|EGI35071.1| adenylyl-sulfate kinase [Escherichia coli TA271]
 gi|331073561|gb|EGI44882.1| adenylyl-sulfate kinase [Escherichia coli H591]
 gi|332091913|gb|EGI96991.1| adenylylsulfate kinase [Shigella boydii 3594-74]
 gi|332102939|gb|EGJ06285.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Shigella sp. D9]
          Length = 201

 Score = 36.2 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|326797261|ref|YP_004315081.1| glycerol-3-phosphate-transporting ATPase [Marinomonas
          mediterranea MMB-1]
 gi|326548025|gb|ADZ93245.1| Glycerol-3-phosphate-transporting ATPase [Marinomonas
          mediterranea MMB-1]
          Length = 365

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G FI F G  G GK+T + ++
Sbjct: 27 IKQGEFIVFVGPSGCGKSTLLRMI 50


>gi|302349271|ref|YP_003816909.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
           345-15]
 gi|302329683|gb|ADL19878.1| Signal recognition 54 kDa protein [Acidilobus saccharovorans
           345-15]
          Length = 444

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 27/142 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT    L RF   + Y V +       P A E  R +    G         A+
Sbjct: 103 GVQGSGKTTTAGKLARFYSARGYRVGLVETDTYRPGALEQLRTLAQMSG---------AL 153

Query: 70  VFA--AARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
            +   A R + +    ++     G  ++    +  +    G  D  +   LD ++ I+  
Sbjct: 154 FYGEPAGRAEEIASRGVKELESRGAQVI----IVDTAGRHGYGD--EQALLDEMRRIA-D 206

Query: 127 EVMPD---CTIILDLPVDIGLK 145
            V PD         +   IG +
Sbjct: 207 AVSPDEVALV----VDAAIGQR 224


>gi|300117288|ref|ZP_07055078.1| ABC transporter, ATP-binding protein [Bacillus cereus SJ1]
 gi|298725123|gb|EFI65775.1| ABC transporter, ATP-binding protein [Bacillus cereus SJ1]
          Length = 72

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|294677186|ref|YP_003577801.1| ABC transporter ATP-binding protein [Rhodobacter capsulatus SB
          1003]
 gi|294476006|gb|ADE85394.1| ABC transporter, ATP-binding protein [Rhodobacter capsulatus SB
          1003]
          Length = 197

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)

Query: 11 GIEGAGKTTHISLLK-------RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
          G  G+GK+T + +L          LQ  +    V +EP   P      +++L  GVD   
Sbjct: 34 GPSGSGKSTLLRILAGVDTRFRGTLQGPSRRAMVFQEPNLMPWRRVIDNIILPTGVDAAT 93

Query: 64 AEAEA 68
          AEA  
Sbjct: 94 AEAWL 98


>gi|315501286|ref|YP_004080173.1| adenylylsulfate kinase [Micromonospora sp. L5]
 gi|315407905|gb|ADU06022.1| adenylylsulfate kinase [Micromonospora sp. L5]
          Length = 509

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GL I   G+ G+GK+T    L   L+ +      
Sbjct: 327 GLVIFLTGLSGSGKSTIARGLADVLREQGDRTIT 360


>gi|302869823|ref|YP_003838460.1| adenylylsulfate kinase [Micromonospora aurantiaca ATCC 27029]
 gi|302572682|gb|ADL48884.1| adenylylsulfate kinase [Micromonospora aurantiaca ATCC 27029]
          Length = 509

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GL I   G+ G+GK+T    L   L+ +      
Sbjct: 327 GLVIFLTGLSGSGKSTIARGLADVLREQGDRTIT 360


>gi|262173761|ref|ZP_06041438.1| hypothetical protein VII_000851 [Vibrio mimicus MB-451]
 gi|261891119|gb|EEY37106.1| hypothetical protein VII_000851 [Vibrio mimicus MB-451]
          Length = 550

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ EG  GAGK+T ++ L   L+          E GG    E     L            
Sbjct: 361 ITIEGESGAGKSTLLATLLGELEA---------EAGGWFINEQLIANLDDESRSH----- 406

Query: 67  EAIVFAAARLDHV 79
               F A+   HV
Sbjct: 407 ----FIASVDQHV 415


>gi|240146048|ref|ZP_04744649.1| cytidylate kinase [Roseburia intestinalis L1-82]
 gi|257201864|gb|EEV00149.1| cytidylate kinase [Roseburia intestinalis L1-82]
          Length = 221

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T    L + L
Sbjct: 5  IAIDGPAGAGKSTIAKRLAKKL 26


>gi|229090752|ref|ZP_04221985.1| ABC transporter ATP-binding protein [Bacillus cereus Rock3-42]
 gi|228692694|gb|EEL46420.1| ABC transporter ATP-binding protein [Bacillus cereus Rock3-42]
          Length = 78

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229196003|ref|ZP_04322755.1| ABC transporter ATP-binding protein [Bacillus cereus m1293]
 gi|228587385|gb|EEK45451.1| ABC transporter ATP-binding protein [Bacillus cereus m1293]
          Length = 330

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|226948327|ref|YP_002803418.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           A2 str. Kyoto]
 gi|226844281|gb|ACO86947.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           A2 str. Kyoto]
          Length = 571

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M  G   +  G  G+GK+T + L+ RF   +   V + +E
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKE 395


>gi|224370836|ref|YP_002605000.1| ABC-type transporter, ATP-binding protein (ATPase)
          [Desulfobacterium autotrophicum HRM2]
 gi|223693553|gb|ACN16836.1| ABC-type transporter, ATP-binding protein (ATPase)
          [Desulfobacterium autotrophicum HRM2]
          Length = 264

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHV 53
            G FI+  G  GAGKTT  +L+       +   +   RE    P  + A+++
Sbjct: 30 QKGDFITIVGSNGAGKTTLFNLISGAIFPTRGRILIRDREVTHEPEYKRAKNI 82


>gi|222095414|ref|YP_002529474.1| ABC transporter , ATP-binding protein [Bacillus cereus Q1]
 gi|221239472|gb|ACM12182.1| ABC transporter, ATP-binding protein [Bacillus cereus Q1]
          Length = 330

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|152973151|ref|YP_001338297.1| putative ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
          MGH 78578]
 gi|150958000|gb|ABR80030.1| putative ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
          MGH 78578]
          Length = 357

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          ++ G F+   G  G GK+T + LL           +L  +N      RE
Sbjct: 24 IHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITATTPRE 72


>gi|172062962|ref|YP_001810613.1| type II secretion system protein E [Burkholderia ambifaria MC40-6]
 gi|171995479|gb|ACB66397.1| type II secretion system protein E [Burkholderia ambifaria MC40-6]
          Length = 472

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I   G  G+GKTT ++ L + ++     V
Sbjct: 251 IVISGGTGSGKTTLLNALSQHIEEHERIV 279


>gi|27382307|ref|NP_773836.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum
          USDA 110]
 gi|27355478|dbj|BAC52461.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum
          USDA 110]
          Length = 365

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL 28
           G FISF G  G GKTT + ++  FL
Sbjct: 48 KGEFISFLGPSGCGKTTTLQMIAGFL 73


>gi|86150811|ref|ZP_01069027.1| guanylate kinase, putative [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124643|ref|YP_004066647.1| guanylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|85841981|gb|EAQ59227.1| guanylate kinase, putative [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018365|gb|ADT66458.1| guanylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 205

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  +   G  GAGK+T +  L    + + Y      TR+P          H + S    
Sbjct: 2   QGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGVHYHFI-SHEEF 60

Query: 61  EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
           + G +++  +  A   ++         + AL  GKI++ D
Sbjct: 61  QKGIDSDHFLEWARVHENFYGTSLKHTQNALDNGKIVVFD 100


>gi|75759002|ref|ZP_00739111.1| Transporter [Bacillus thuringiensis serovar israelensis ATCC
          35646]
 gi|74493537|gb|EAO56644.1| Transporter [Bacillus thuringiensis serovar israelensis ATCC
          35646]
          Length = 104

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|158314468|ref|YP_001506976.1| hypothetical protein Franean1_2640 [Frankia sp. EAN1pec]
 gi|158109873|gb|ABW12070.1| conserved hypothetical protein [Frankia sp. EAN1pec]
          Length = 175

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 49/155 (31%), Gaps = 36/155 (23%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK++    L+    R    V +  +       +  R VLL    +  G    
Sbjct: 2   VIRGNSGAGKSSVARTLRA---RAGRGVALVEQ-------DYLRQVLLRERDEPGGVAPA 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQEISV 125
                      ++  +R  L  G  +          A +G   +S+H  +  + L     
Sbjct: 52  L----------IDQTVRFCLDHGVHV----------ALEGILAASRHTTMISELLHAHRG 91

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +         LD  ++  L+R   R    E +  D
Sbjct: 92  RSF----VFYLDASLEETLRRHATRPQAAEFSGED 122


>gi|67904710|ref|XP_682611.1| hypothetical protein AN9342.2 [Aspergillus nidulans FGSC A4]
 gi|40747253|gb|EAA66409.1| hypothetical protein AN9342.2 [Aspergillus nidulans FGSC A4]
          Length = 1865

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 20/27 (74%)

Query: 3    SGLFISFEGIEGAGKTTHISLLKRFLQ 29
            SG F++F G  G GK+T ISL++RF +
Sbjct: 1089 SGQFVAFVGPSGCGKSTLISLIERFYE 1115


>gi|23016315|ref|ZP_00056072.1| COG0488: ATPase components of ABC transporters with duplicated
           ATPase domains [Magnetospirillum magnetotacticum MS-1]
          Length = 559

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 40/123 (32%), Gaps = 18/123 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T + ++    +    +        G      A+   L    D  G   EA+ 
Sbjct: 41  GVNGAGKSTLLKIMAGIDKEYGGEAWAAE---GVKIGYLAQEPHLDPAKDVMGNVMEAVA 97

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
              A LD  E V      E    L D  ++   A QG         +D L          
Sbjct: 98  ETKALLDRFEEVSAKFAEE----LSDDEMNDLIAEQG----ELQEKIDHLNAW------- 142

Query: 131 DCT 133
           D T
Sbjct: 143 DLT 145


>gi|326500702|dbj|BAJ95017.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 244

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSGLYQHCETVGRRIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
               +     ++H+E+ +   L E
Sbjct: 69 GPNGGLIYC--MEHLEDNLDDWLDE 91


>gi|320197445|gb|EFW72059.1| Dephospho-CoA kinase [Escherichia coli WV_060327]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|318061347|ref|ZP_07980068.1| ABC transporter [Streptomyces sp. SA3_actG]
          Length = 1194

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 7/93 (7%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LS 56
            +++G  I+  G  GAGKTT   +L RFL  +     V   P      +A R ++      
Sbjct: 946  LDAGRRIAVVGASGAGKTTLAHVLLRFLDAEGGTYRVGDTPATALDGDAVREIVGLCAQD 1005

Query: 57   CGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89
              V +       ++   AR D  E  +R  L  
Sbjct: 1006 AHVFDSSVRENLLL---ARKDATEAELRAVLSR 1035


>gi|317484935|ref|ZP_07943822.1| CobW/HypB/UreG [Bilophila wadsworthia 3_1_6]
 gi|316923811|gb|EFV45010.1| CobW/HypB/UreG [Bilophila wadsworthia 3_1_6]
          Length = 321

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 21/138 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           LFI+  G  G+GKTT ++ +      +   +  +  E G      +         ++E  
Sbjct: 11  LFIT--GFLGSGKTTLLNRILDEAAAQGKKIGVIINEWGRVNIDSSLIRA-KDIEIEELN 67

Query: 64  A-----------EAEAIVFAAARLDHVENVIRPALMEG---KILLCD--RFLDSSYAYQG 107
                         EA+V  A R   V  V    +      + +LCD  R     Y YQG
Sbjct: 68  DGQVFCSCLSGNFLEALVLLAKRSLDVVIVETSGMANPFPLRNILCDLKRLTGGHYVYQG 127

Query: 108 ERDSSQHL-FLDSLQEIS 124
                    FLD +++I+
Sbjct: 128 MIALIDPESFLDLVEDIN 145


>gi|311031191|ref|ZP_07709281.1| ABC transporter, ATP-binding protein [Bacillus sp. m3-13]
          Length = 259

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G FISF G  G GKTT +S++   L+
Sbjct: 33 GEFISFLGPSGCGKTTLLSIIAGLLR 58


>gi|325109395|ref|YP_004270463.1| cytidylate kinase [Planctomyces brasiliensis DSM 5305]
 gi|324969663|gb|ADY60441.1| cytidylate kinase [Planctomyces brasiliensis DSM 5305]
          Length = 230

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  G GK+T   LL   L
Sbjct: 15 ITIDGPAGTGKSTVARLLAERL 36


>gi|308190277|ref|YP_003923208.1| spermidine/putrescine transport ATP-binding protein [Mycoplasma
          fermentans JER]
 gi|319777668|ref|YP_004137319.1| spermidine/putrescine abc transporterATP-binding protein pota
          [Mycoplasma fermentans M64]
 gi|307625019|gb|ADN69324.1| spermidine/putrescine transport ATP-binding protein [Mycoplasma
          fermentans JER]
 gi|318038743|gb|ADV34942.1| Spermidine/putrescine ABC transporterATP-binding protein PotA
          [Mycoplasma fermentans M64]
          Length = 457

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++  G  G+GKTT + L+ 
Sbjct: 33 INKGEFVTLLGPSGSGKTTILRLIA 57


>gi|295425569|ref|ZP_06818258.1| excision endonuclease subunit UvrA [Lactobacillus amylolyticus DSM
           11664]
 gi|295064745|gb|EFG55664.1| excision endonuclease subunit UvrA [Lactobacillus amylolyticus DSM
           11664]
          Length = 951

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHISL-LKRFLQRK 31
           G  I   G+ G+GK+T +++ LKR L +K
Sbjct: 628 GKLIVVTGVSGSGKSTLVNMILKRALAQK 656


>gi|317133052|ref|YP_004092366.1| guanylate kinase [Ethanoligenens harbinense YUAN-3]
 gi|315471031|gb|ADU27635.1| guanylate kinase [Ethanoligenens harbinense YUAN-3]
          Length = 198

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 34/178 (19%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61
            GL +   G  GAGK T I  L R      Y +   TR P          + L     ++
Sbjct: 4   RGLLLVVSGPSGAGKGTVIEELFRRRAGLFYSISATTRAPRPGEVDGEQYYFLSKEEFEQ 63

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY-AYQGERDSSQHLFLDSL 120
             A+   + +A                        R+ ++ Y + +G  +  +   LD +
Sbjct: 64  EIAQDNMLEYA------------------------RYCENYYGSPRGPVEDKRAQGLDVI 99

Query: 121 QEISVQEVM------PDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170
            EI VQ  M       D T++  +P   +   KR++ R +  E       E     I 
Sbjct: 100 LEIEVQGAMKVRHNCADATLVFIMPPSIEELAKRLRGRGTESEDVVRRRLETSKAEIQ 157


>gi|284921681|emb|CBG34753.1| putative chaperone protein [Escherichia coli 042]
          Length = 647

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 24/123 (19%)

Query: 118 DSLQEISVQEVMPDCTI----------ILDL-------PVDIG-LKRVQNRYSLRESACL 159
            +L        +PD TI          +LD+         +   ++  +    L +    
Sbjct: 82  RALNTF-SGHPLPDVTIKSEEEFTWQAVLDMLCEENEATPEHAPMQLAKALSFLEKKDLS 140

Query: 160 DY--FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN--IVWELVQKR 215
               FE   ++   +  +  L +A  Q  R H+V  +    ++ T I    +++  ++K+
Sbjct: 141 SRMSFEEALLLHLHRVFRPLLTLAAAQTFRWHLVAGSRQP-AIQTEINESCLLYSRIEKQ 199

Query: 216 VSP 218
           ++P
Sbjct: 200 ITP 202


>gi|225581211|gb|ACN94778.1| GA14347 [Drosophila miranda]
          Length = 229

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 11/99 (11%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEKRRQIFLDIARNQPDR 187
           D  +  D   D  LKR+  R +       D  E   R  +   ++     L++     D+
Sbjct: 134 DLALYFDCSEDTMLKRILARAAAAAVKRSDDNEETIRARLQTFKQNTSAILEL---YADK 190

Query: 188 CHI----VDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
                  +++      +   ++  +  +++K+ + L++ 
Sbjct: 191 TLTASSKINAERDVDDIFQEVVQAIDCVLKKK-AKLAAH 228


>gi|229823925|ref|ZP_04449994.1| hypothetical protein GCWU000282_01229 [Catonella morbi ATCC 51271]
 gi|229786658|gb|EEP22772.1| hypothetical protein GCWU000282_01229 [Catonella morbi ATCC 51271]
          Length = 352

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 6   FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREP 41
            I F G  G+GKTT I  LL+  L +++  V    +P
Sbjct: 141 LILFSGPVGSGKTTTIYHLLRERLDQESIQVITMEDP 177


>gi|229541118|ref|ZP_04430178.1| signal recognition particle-docking protein FtsY [Bacillus
           coagulans 36D1]
 gi|229325538|gb|EEN91213.1| signal recognition particle-docking protein FtsY [Bacillus
           coagulans 36D1]
          Length = 332

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I F G+ G GKTT I  L   L+++   V +    G T  A A   +
Sbjct: 123 ILFVGVNGVGKTTTIGKLAHMLKQQGKKVIMAA--GDTFRAGAIEQL 167


>gi|228931993|ref|ZP_04094885.1| Cof-like hydrolase [Bacillus thuringiensis serovar andalousiensis
          BGSC 4AW1]
 gi|228827576|gb|EEM73318.1| Cof-like hydrolase [Bacillus thuringiensis serovar andalousiensis
          BGSC 4AW1]
          Length = 362

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F    G  G GK+T + ++ 
Sbjct: 23 MKKGEFFVLVGPSGCGKSTLLRMIA 47


>gi|297562562|ref|YP_003681536.1| hypothetical protein Ndas_3630 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847010|gb|ADH69030.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 163

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 59/199 (29%), Gaps = 46/199 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
            EG+ G GKT+    +   L+R+ Y        G    A          G    G   E 
Sbjct: 8   VEGVSGTGKTS----VCAELRRRGYHAV----DGDLELAYQGDP---RTGEPTEGMRHEH 56

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
            ++   R+  +              + DR   S+  +      +   F+D          
Sbjct: 57  HLWHVDRVRSL--------------VADR--GSAVTFFCGGSRNFPEFVDLF-------- 92

Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188
             D   +L++      +R+  R            ER  +    + ++       + P   
Sbjct: 93  --DGVFVLEIDPGTLRRRLDGRPEGEWGGRQA--ERDLIARLHRTKE-------DVPRDG 141

Query: 189 HIVDSAHSFQSVATNILNI 207
            +VD+      V   IL +
Sbjct: 142 TVVDATRPLARVVDEILRL 160


>gi|229918698|ref|YP_002887344.1| cytidylate kinase [Exiguobacterium sp. AT1b]
 gi|259494038|sp|C4L6M0|KCY_EXISA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|229470127|gb|ACQ71899.1| cytidylate kinase [Exiguobacterium sp. AT1b]
          Length = 224

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   L I+ +G  GAGK+T    L + L
Sbjct: 1  MKKSLQIALDGPAGAGKSTIAKSLAKQL 28


>gi|171911983|ref|ZP_02927453.1| ABC transporter related protein [Verrucomicrobium spinosum DSM
           4136]
          Length = 596

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           I+  G  GAGK+T ++LL RF + +  +V +   P       A R 
Sbjct: 386 IALVGPSGAGKSTVVNLLYRFYEPEKGEVLLDGRPARDYPLAALRK 431


>gi|167758413|ref|ZP_02430540.1| hypothetical protein CLOSCI_00753 [Clostridium scindens ATCC
          35704]
 gi|167664310|gb|EDS08440.1| hypothetical protein CLOSCI_00753 [Clostridium scindens ATCC
          35704]
          Length = 510

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          I+FEG + AGK   I  L + L  + ++VH  +
Sbjct: 45 IAFEGYDAAGKGVQIGELIKALDPRGFEVHAVK 77


>gi|162453921|ref|YP_001616288.1| carbohydrate ABC transporter [Sorangium cellulosum 'So ce 56']
 gi|161164503|emb|CAN95808.1| ABC transporter family carbohydrate exporter [Sorangium cellulosum
           'So ce 56']
          Length = 663

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-----VTREPGGTPAAEAARHV-------- 53
           ++  G  GAGKTT ++LL RF +     +      + R P     A+    +        
Sbjct: 444 VAIVGPTGAGKTTLVNLLMRFYELDGGRILIDGVDIARLPRHELRAKLGIVLQDTWLFSG 503

Query: 54  -LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
            +            EA +  AAR  HV+  +R AL  G   + D
Sbjct: 504 TIRDNIAFGNATATEADIQEAARAAHVDRFVR-ALPAGYDTVID 546


>gi|161525122|ref|YP_001580134.1| ABC transporter-like protein [Burkholderia multivorans ATCC
          17616]
 gi|189350135|ref|YP_001945763.1| ABC-type antimicrobial peptide transporter ATPase [Burkholderia
          multivorans ATCC 17616]
 gi|160342551|gb|ABX15637.1| ABC transporter related [Burkholderia multivorans ATCC 17616]
 gi|189334157|dbj|BAG43227.1| ABC-type antimicrobial peptide transport system ATPase component
          [Burkholderia multivorans ATCC 17616]
          Length = 238

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          + +G FI   G  G+GKTT ++L+
Sbjct: 30 LAAGRFIVLAGPSGSGKTTLLNLI 53


>gi|186472355|ref|YP_001859697.1| hypothetical protein Bphy_3502 [Burkholderia phymatum STM815]
 gi|184194687|gb|ACC72651.1| protein of unknown function DUF344 [Burkholderia phymatum STM815]
          Length = 273

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG +GAGK   I  +   +  + + V     P           + L   +    A  
Sbjct: 51  IVFEGRDGAGKGGVIKAITERVNPRVFRVVALPAPTDREKT----QMYLQRYLPHLPAAG 106

Query: 67  EAIVF 71
           E ++F
Sbjct: 107 EIVLF 111


>gi|117618794|ref|YP_856206.1| maltose/maltodextrin import ATP-binding protein MalK [Aeromonas
          hydrophila subsp. hydrophila ATCC 7966]
 gi|117560201|gb|ABK37149.1| maltose/maltodextrin import ATP-binding protein MalK [Aeromonas
          hydrophila subsp. hydrophila ATCC 7966]
          Length = 378

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 29 IKEGEFIVFVGPSGCGKSTLLRMIA 53


>gi|150376697|ref|YP_001313293.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase [Sinorhizobium medicae WSM419]
 gi|150031244|gb|ABR63360.1| sulfate adenylyltransferase, large subunit [Sinorhizobium medicae
           WSM419]
          Length = 633

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L R L  +    +                 LL       G   + 
Sbjct: 465 FTGLSGSGKSTIANELDRILHAQGKHTY-----------------LLDGDNVRHGLNRDL 507

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V +     G I+L      S  +   +        +D  + I  
Sbjct: 508 GFTEEDRVENIRRVAEVAKLMADAGLIVLV-----SFISPFRDERRMARELMDDGEFIE- 561

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P++   +R
Sbjct: 562 --------IFVDTPIEECARR 574


>gi|329938942|ref|ZP_08288316.1| shikimate kinase [Streptomyces griseoaurantiacus M045]
 gi|329301827|gb|EGG45720.1| shikimate kinase [Streptomyces griseoaurantiacus M045]
          Length = 172

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 58/207 (28%), Gaps = 41/207 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M++   +   G  G GK+T   LL   L         T              + L  G  
Sbjct: 1   MSAAPVVVLVGPMGVGKSTVGELLAERL---GLGYRDTDADIVAARGLTVSEIFLDEGEP 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F A               ++ +R AL E + +L            G            L
Sbjct: 58  VFRALE-------------KDAVRRALEEHEGVLA----------LGGGAVLDPDTRALL 94

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                        + L + V+  ++R     +           ++   + E RR ++ ++
Sbjct: 95  AG--------HKVVYLTMDVEEAVRRTGLNAARPLLTLNPR--KQWRELMEARRHLYEEV 144

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207
           A          D     + VA  +L+ 
Sbjct: 145 ATA----VVATDG-RDPEEVAQAVLDA 166


>gi|329767275|ref|ZP_08258802.1| hypothetical protein HMPREF0428_00499 [Gemella haemolysans M341]
 gi|328836942|gb|EGF86589.1| hypothetical protein HMPREF0428_00499 [Gemella haemolysans M341]
          Length = 596

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
             G  I+  G  GAGKTT + LL RF      ++ +
Sbjct: 382 KKGEMIAIVGPTGAGKTTMVKLLMRFYDNNGGNIFI 417


>gi|327194792|gb|EGE61630.1| putative ABC transporter, ATP-binding protein [Rhizobium etli
          CNPAF512]
          Length = 353

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLK 25
          MN   G F+SF G  G GKTT + ++ 
Sbjct: 24 MNIEKGEFVSFLGPSGCGKTTVLRMIA 50


>gi|325109276|ref|YP_004270344.1| sulfate-transporting ATPase [Planctomyces brasiliensis DSM 5305]
 gi|324969544|gb|ADY60322.1| Sulfate-transporting ATPase [Planctomyces brasiliensis DSM 5305]
          Length = 257

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 12/81 (14%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLL 55
            G  ++F G  GAGK+T + +L  +L       +   +DVH  R            +   
Sbjct: 46  RGQIVAFLGPNGAGKSTTMKMLTGYLAPTRGAARIAGHDVHQDRLEAARVLGYLPEN--- 102

Query: 56  SCGVDEFGAEAEAIVFAAARL 76
                E   +   ++    RL
Sbjct: 103 GPLYTEMTPKG--LLHFCGRL 121


>gi|296268962|ref|YP_003651594.1| signal recognition particle protein [Thermobispora bispora DSM
           43833]
 gi|296091749|gb|ADG87701.1| signal recognition particle protein [Thermobispora bispora DSM
           43833]
          Length = 508

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++L+ + +
Sbjct: 107 GLQGAGKTTLAGKLAKWLRDQGH 129


>gi|256020060|ref|ZP_05433925.1| dephospho-CoA kinase [Shigella sp. D9]
 gi|332103561|gb|EGJ06907.1| dephospho-CoA kinase [Shigella sp. D9]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|242238936|ref|YP_002987117.1| ABC transporter [Dickeya dadantii Ech703]
 gi|242130993|gb|ACS85295.1| ABC transporter related [Dickeya dadantii Ech703]
          Length = 265

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGVDE 61
           G F    G    GK+T +  L R L+ +  +V +  R     P    AR + LL      
Sbjct: 30  GKFSVIIGPNACGKSTLLRALCRLLKPQAGEVLLDGRNIHRIPTKLLARQLGLLPQHAIV 89

Query: 62  FGAEAEAIVFAAARLDHVENVIRPA 86
                 A + +  R  H + ++RP 
Sbjct: 90  PDNITVADLVSRGRYPH-QTLLRPW 113


>gi|315499288|ref|YP_004088092.1| sulfate adenylyltransferase, large subunit [Asticcacaulis
           excentricus CB 48]
 gi|315417300|gb|ADU13941.1| sulfate adenylyltransferase, large subunit [Asticcacaulis
           excentricus CB 48]
          Length = 640

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 17/74 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  +L+++ L    Y  H T               LL       G   + 
Sbjct: 465 FTGLSGAGKSTIANLVEKKLLSLGY--HTT---------------LLDGDNVRHGLNKDL 507

Query: 69  IVFAAARLDHVENV 82
               A R++++  V
Sbjct: 508 GFSDADRVENIRRV 521


>gi|254788147|ref|YP_003075576.1| sulfate adenylyltransferase, large subunit [Teredinibacter turnerae
           T7901]
 gi|237687397|gb|ACR14661.1| sulfate adenylyltransferase, large subunit [Teredinibacter turnerae
           T7901]
          Length = 632

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 20/91 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G+GK+T  + L++ L    Y  +                 LL       G  +
Sbjct: 462 IWFTGLSGSGKSTTANALEKQLFAMGYSTY-----------------LLDGDNVRHGLCS 504

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILL 94
           +       R++++     V +  +  G+I+L
Sbjct: 505 DLGFSDRDRIENIRRVGEVAKLMVDAGQIVL 535


>gi|297198274|ref|ZP_06915671.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197715527|gb|EDY59561.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 196

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 53/159 (33%), Gaps = 36/159 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I  +G  G+GK+T    L   L             GG P        +L        A
Sbjct: 9   RLIGVDGHAGSGKSTFAGRLADAL-------------GGAP--------VLHLDDI---A 44

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF-LDSSYA-YQGERDSSQHLFLDSLQE 122
             EA++    R   ++ VI P L  G+      + +   +A   G   +     +  L+ 
Sbjct: 45  SHEALLGWTGR--LLDEVITP-LGRGETA---HYAVYDWHARRFGPSRTLPPAPVILLEG 98

Query: 123 ISVQ--EVMPDCT--IILDLPVDIGLKRVQNRYSLRESA 157
           +      + P     + ++LP +    R ++R    +  
Sbjct: 99  VGAGRRALRPHLARLLWMELPPEESWARGRSRDGAEQRE 137


>gi|192360531|ref|YP_001983953.1| signal recognition particle receptor FtsY [Cellvibrio japonicus
           Ueda107]
 gi|190686696|gb|ACE84374.1| signal recognition particle receptor FtsY [Cellvibrio japonicus
           Ueda107]
          Length = 374

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ     V +    G T  A A   + +    +     A+   
Sbjct: 176 GVNGVGKTTTIGKLAKRLQNDGRKVMLAA--GDTFRAAAVEQLQVWGQRNNVPVIAQHS- 232

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + +  A   G  +++ D
Sbjct: 233 -GADSASVIFDALSAAQSRGIDVVIAD 258


>gi|187935112|ref|YP_001886820.1| aliphatic sulfonates import ATP-binding protein SsuB [Clostridium
          botulinum B str. Eklund 17B]
 gi|187723265|gb|ACD24486.1| aliphatic sulfonates import ATP-binding protein SsuB [Clostridium
          botulinum B str. Eklund 17B]
          Length = 255

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          N G FIS  G  G GK+T ++++   L+  +  +    E
Sbjct: 31 NDGEFISILGPSGCGKSTLLNIISGLLKASSGSILYKDE 69


>gi|218438123|ref|YP_002376452.1| signal transduction protein with Nacht domain protein [Cyanothece
           sp. PCC 7424]
 gi|218170851|gb|ACK69584.1| putative signal transduction protein with Nacht domain protein
           [Cyanothece sp. PCC 7424]
          Length = 951

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 2/89 (2%)

Query: 7   ISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           +  EG  G+GKTT +  LL    Q+K+ D      P     +     +++      +   
Sbjct: 72  VVLEGRPGSGKTTALRRLLLEIAQKKDLDKIPIFVPLRDYKSSIL-ELIIDAIAYNYSPR 130

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILL 94
                        +   I+  L++GK+LL
Sbjct: 131 LLGEGLGERSTQTLTEEIKTYLVQGKLLL 159


>gi|188990287|ref|YP_001902297.1| adenylate kinase [Xanthomonas campestris pv. campestris str. B100]
 gi|229487647|sp|B0RP52|KAD_XANCB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|167732047|emb|CAP50237.1| adenylate kinase [Xanthomonas campestris pv. campestris]
          Length = 187

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 33/208 (15%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK T  + LK            T +       +  R  + +       A+  
Sbjct: 4   VLLGPPGSGKGTQAARLKD-----------TFQIPHISTGDLLRAEVAAGSPLGVKAKE- 51

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 AR D V + I   ++E ++   D  + + +   G   +      ++L  +  + 
Sbjct: 52  ----VMARGDLVSDEILLGMLEARLGQAD--VANGFILDGYPRNVAQA--NALDSLLSKI 103

Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182
             P D  + LD+  ++ ++R+  R    E    D  E        KR Q++ D       
Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157

Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208
              Q  +   VD   S   V   I   +
Sbjct: 158 FYEQRGKLARVDGVGSLDEVLKRIGQAL 185


>gi|157376120|ref|YP_001474720.1| adenylyl-sulfate kinase [Shewanella sediminis HAW-EB3]
 gi|157318494|gb|ABV37592.1| Adenylyl-sulfate kinase [Shewanella sediminis HAW-EB3]
          Length = 223

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 48/149 (32%), Gaps = 40/149 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L       +                 +L       G   + 
Sbjct: 44  FTGLSGSGKSTVANAVDKMLHDLGCKTY-----------------VLDGDNVRHGLNGDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE--- 122
               A R++++     V +  +  G ++        S A+       +      L +   
Sbjct: 87  GFSDADRVENIRRIGEVSKLFVDAGLLV--------STAFISPFVEDRESVRALLNDSQY 138

Query: 123 -----ISVQEVMPDCTIILDLPVDIGLKR 146
                 + Q +     + +D P+++  +R
Sbjct: 139 SNSQHSNSQFIE----VYIDTPIEVCEQR 163


>gi|138894715|ref|YP_001125168.1| Signal recognition particle-docking protein FtsY [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247666|ref|ZP_03146368.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           G11MC16]
 gi|134266228|gb|ABO66423.1| Signal recognition particle-docking protein FtsY [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212450|gb|EDY07207.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           G11MC16]
          Length = 329

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    +  G + 
Sbjct: 125 ILFVGVNGVGKTTTIGKLAHKLKSEGKSVLLAA--GDTFRAGAIEQ--LEVWGERVGVDV 180

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
                 +     + + I+ A   G  +LLCD
Sbjct: 181 IKQTAGSDPAAVMYDAIQAAKARGVDVLLCD 211


>gi|49481667|ref|YP_034825.1| glycerol-3-phosphate ABC transporter ATP-binding protein
          [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|118476254|ref|YP_893405.1| glycerol-3-phosphate ABC transporter ATP-binding protein
          [Bacillus thuringiensis str. Al Hakam]
 gi|49333223|gb|AAT63869.1| ABC transporter, ATP-binding protein; probable
          glycerol-3-phosphate ABC transporter, ATP-binding
          protein [Bacillus thuringiensis serovar konkukian str.
          97-27]
 gi|118415479|gb|ABK83898.1| carbohydrate ABC transporter ATP-binding protein, CUT1 family
          [Bacillus thuringiensis str. Al Hakam]
          Length = 376

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F    G  G GK+T + ++ 
Sbjct: 37 MKKGEFFVLVGPSGCGKSTLLRMIA 61


>gi|49259229|pdb|1T3H|A Chain A, X-Ray Structure Of Dephospho-Coa Kinase From E. Coli
           Norteast Structural Genomics Consortium Target Er57
 gi|49259230|pdb|1T3H|B Chain B, X-Ray Structure Of Dephospho-Coa Kinase From E. Coli
           Norteast Structural Genomics Consortium Target Er57
 gi|49259231|pdb|1T3H|C Chain C, X-Ray Structure Of Dephospho-Coa Kinase From E. Coli
           Norteast Structural Genomics Consortium Target Er57
          Length = 214

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTXQRDDVTREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|26554475|ref|NP_758409.1| ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2]
 gi|26454485|dbj|BAC44813.1| ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2]
          Length = 286

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           +  G F+   G  G+GKTT +++L    +     V V
Sbjct: 85  IKQGKFVVILGKSGSGKTTLMNILSALTRATTGSVVV 121


>gi|77413922|ref|ZP_00790097.1| excinuclease ABC, A subunit [Streptococcus agalactiae 515]
 gi|77160007|gb|EAO71143.1| excinuclease ABC, A subunit [Streptococcus agalactiae 515]
          Length = 937

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 629 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 661


>gi|77412569|ref|ZP_00788860.1| excinuclease ABC, A subunit [Streptococcus agalactiae CJB111]
 gi|77161383|gb|EAO72403.1| excinuclease ABC, A subunit [Streptococcus agalactiae CJB111]
          Length = 937

 Score = 36.2 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 629 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 661


>gi|323127974|gb|ADX25271.1| ferrichrome transport ATP-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 273

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCGVD 60
            G   +  G  G+GK+T + LL +    K   V + +E     + +  A +  ++     
Sbjct: 32  KGKITTIMGANGSGKSTLLRLLTKNFPVKQGQVWLEQEALDKISLKAFAKKAAVVHQYHR 91

Query: 61  EFGAEAEAIVFAAARLDH 78
                    + A ARL H
Sbjct: 92  VVDDLTVGELVAMARLAH 109


>gi|322377959|ref|ZP_08052447.1| ABC transporter, ATP-binding protein [Streptococcus sp. M334]
 gi|321281135|gb|EFX58147.1| ABC transporter, ATP-binding protein [Streptococcus sp. M334]
          Length = 225

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G F    G  G+GK+T ++LL
Sbjct: 30 KGKFTVILGPSGSGKSTLLNLL 51


>gi|319745685|gb|EFV97984.1| excision endonuclease subunit UvrA [Streptococcus agalactiae ATCC
           13813]
          Length = 942

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 666


>gi|319652617|ref|ZP_08006731.1| hypothetical protein HMPREF1013_03345 [Bacillus sp. 2_A_57_CT2]
 gi|317395691|gb|EFV76415.1| hypothetical protein HMPREF1013_03345 [Bacillus sp. 2_A_57_CT2]
          Length = 88

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQR 30
          G F+   G  G+GK+T + ++ R L++
Sbjct: 27 GKFVGIIGPNGSGKSTMLKIIYRHLKQ 53


>gi|290961843|ref|YP_003493025.1| shikimate kinase I [Streptomyces scabiei 87.22]
 gi|260651369|emb|CBG74491.1| shikimate kinase I [Streptomyces scabiei 87.22]
          Length = 172

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 55/204 (26%), Gaps = 41/204 (20%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G GK+T   LL   L         T +            + L  G       
Sbjct: 6   LVVLVGPMGVGKSTVGQLLAERL---GVAYRDTDDDIVAEQGREIAEIFLDEGE------ 56

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 AA R    +  +R AL     +L            G            L     
Sbjct: 57  ------AAFRAIE-KQAVRTALASHDGVLA----------LGGGAILDADTRALLSG--- 96

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                   + L + V+  +KR     +    A      ++   + + RR ++ ++A    
Sbjct: 97  -----QRVVYLSMDVEEAVKRTGLNAARPLLAVNPR--KQWRELMDARRSLYEEVATA-- 147

Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209
                 D   + + V    L+ + 
Sbjct: 148 --VVATDG-RTPEEVTRAALDALE 168


>gi|262045279|ref|ZP_06018304.1| ABC superfamily ATP binding cassette transporter,ABC protein
          [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
          13884]
 gi|259037335|gb|EEW38581.1| ABC superfamily ATP binding cassette transporter,ABC protein
          [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
          13884]
          Length = 356

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          ++ G F+   G  G GK+T + LL           +L  +N      RE
Sbjct: 24 IHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITATTPRE 72


>gi|295399449|ref|ZP_06809431.1| ABC transporter related protein [Geobacillus thermoglucosidasius
          C56-YS93]
 gi|312109992|ref|YP_003988308.1| ABC transporter [Geobacillus sp. Y4.1MC1]
 gi|294978915|gb|EFG54511.1| ABC transporter related protein [Geobacillus thermoglucosidasius
          C56-YS93]
 gi|311215093|gb|ADP73697.1| ABC transporter related protein [Geobacillus sp. Y4.1MC1]
          Length = 255

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G FI+  G  G GK+T + ++ 
Sbjct: 29 INNGEFITIIGPSGCGKSTLLKIVA 53


>gi|251783251|ref|YP_002997556.1| ferrichrome transport ATP-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391883|dbj|BAH82342.1| ferrichrome transport ATP-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 273

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCGVD 60
            G   +  G  G+GK+T + LL +    K   V + +E     + +  A +  ++     
Sbjct: 32  KGKITTIMGANGSGKSTLLRLLTKNFPVKQGQVWLEQEALDKISLKAFAKKAAVVHQYHR 91

Query: 61  EFGAEAEAIVFAAARLDH 78
                    + A ARL H
Sbjct: 92  VVDDLTVGELVAMARLAH 109


>gi|229193070|ref|ZP_04320025.1| ABC transporter-related protein [Bacillus cereus ATCC 10876]
 gi|228590334|gb|EEK48198.1| ABC transporter-related protein [Bacillus cereus ATCC 10876]
          Length = 254

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 33 GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 85


>gi|259908368|ref|YP_002648724.1| putative kinase [Erwinia pyrifoliae Ep1/96]
 gi|224963990|emb|CAX55495.1| putative kinase [Erwinia pyrifoliae Ep1/96]
 gi|283478308|emb|CAY74224.1| Adenylyl-sulfate kinase; APS kinase; Adenosine-5'-phosphosulfate
          kinase; ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase [Erwinia pyrifoliae DSM 12163]
          Length = 168

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
          + I F G+ G+GK+T   +L   ++ 
Sbjct: 1  MLIIFSGLPGSGKSTIARVLAARIRA 26


>gi|221481404|gb|EEE19794.1| adenylate kinase, putative [Toxoplasma gondii GT1]
 gi|221501996|gb|EEE27746.1| adenylate kinase, putative [Toxoplasma gondii VEG]
          Length = 374

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 49/147 (33%), Gaps = 24/147 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
            I   G   +GK T  +LL+  L                   +  R +    G + E G 
Sbjct: 136 LICLFGPPCSGKGTLAALLRDNLGML-----------HCSTGDLLRQIAKEEGENSEVGT 184

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             +A      R+     V++ A+ +    +C           G         +D L+E+ 
Sbjct: 185 AMKAGKLVDDRV--TARVLQDAVAKNANAMC-----KGIILDGFPRIDTQ--VDLLREM- 234

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY 151
             ++ PD   +L +P     +R+  R 
Sbjct: 235 --KLWPDVCFLLKVPNATLFQRMAARR 259


>gi|237844217|ref|XP_002371406.1| adenylate kinase, putative [Toxoplasma gondii ME49]
 gi|211969070|gb|EEB04266.1| adenylate kinase, putative [Toxoplasma gondii ME49]
          Length = 374

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 49/147 (33%), Gaps = 24/147 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64
            I   G   +GK T  +LL+  L                   +  R +    G + E G 
Sbjct: 136 LICLFGPPCSGKGTLAALLRDNLGML-----------HCSTGDLLRQIAKEEGENSEVGT 184

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             +A      R+     V++ A+ +    +C           G         +D L+E+ 
Sbjct: 185 AMKAGKLVDDRV--TARVLQDAVAKNANAMC-----KGIILDGFPRIDTQ--VDLLREM- 234

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY 151
             ++ PD   +L +P     +R+  R 
Sbjct: 235 --KLWPDVCFLLKVPNATLFQRMAARR 259


>gi|195159800|ref|XP_002020766.1| GL15790 [Drosophila persimilis]
 gi|194117716|gb|EDW39759.1| GL15790 [Drosophila persimilis]
          Length = 4041

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 26/119 (21%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            +   G  G GK+T ++LL++ L        VH       +      R   L     ++  
Sbjct: 1914 VVLVGPPGCGKSTIMALLRQALTSSGMQLRVHTISPKSMSRVQLLGR---LDADTRQWQD 1970

Query: 65   EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                +   A     V     PA      ++CD              S    ++++L  +
Sbjct: 1971 G--VLTHTA-----VAVNQEPA-QVHSWIVCD-------------GSIDPEWIEALNSV 2008


>gi|161617554|ref|YP_001591519.1| hypothetical protein SPAB_05413 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161366918|gb|ABX70686.1| hypothetical protein SPAB_05413 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 585

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 9/38 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           M  G         G GKTT  + +   L ++ + VH+T
Sbjct: 334 MGKG---------GVGKTTVAASVAVLLAKRGHKVHLT 362


>gi|154485119|ref|ZP_02027567.1| hypothetical protein EUBVEN_02842 [Eubacterium ventriosum ATCC
          27560]
 gi|149734072|gb|EDM50191.1| hypothetical protein EUBVEN_02842 [Eubacterium ventriosum ATCC
          27560]
          Length = 242

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G F++  G  G+GK+T   L+ 
Sbjct: 32 GKFVAITGPNGSGKSTLAKLIV 53


>gi|149189746|ref|ZP_01868027.1| putative sugar ABC transporter ATP-binding protein [Vibrio
          shilonii AK1]
 gi|148836395|gb|EDL53351.1| putative sugar ABC transporter ATP-binding protein [Vibrio
          shilonii AK1]
          Length = 361

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F+ F G  G GK+T + L+ 
Sbjct: 26 IKKGEFVVFVGPSGCGKSTLLRLIA 50


>gi|229543448|ref|ZP_04432508.1| ABC transporter related [Bacillus coagulans 36D1]
 gi|229327868|gb|EEN93543.1| ABC transporter related [Bacillus coagulans 36D1]
          Length = 256

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/29 (48%), Positives = 17/29 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M  G F+S  G  G GKTT +S+L   LQ
Sbjct: 30 MEEGEFVSLLGPSGCGKTTLLSILAGLLQ 58


>gi|123406779|ref|XP_001302854.1| adenlylate kinase [Trichomonas vaginalis G3]
 gi|121884183|gb|EAX89924.1| adenlylate kinase, putative [Trichomonas vaginalis G3]
          Length = 217

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 48/161 (29%), Gaps = 26/161 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSC 57
           M +   I F G  G+GK T   +L++     +    D   +    G+P     + ++ S 
Sbjct: 1   MATKRIIFF-GPPGSGKGTQSEILEKKFGLAHISTGDCFRSEIAAGSPVGLKVKSIIESG 59

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
            + +     E         + V   I P   +G       F+         +       L
Sbjct: 60  LLVDDATVMEVF-------EAVLGKIPP--EQG-------FILDGIPRTINQAKLLAELL 103

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           + +             I L +  +   +R+  R     S  
Sbjct: 104 EKIGRPVTH------VIYLQVSREELQERICGRLFHPGSGR 138


>gi|170726043|ref|YP_001760069.1| adenylyl-sulfate kinase [Shewanella woodyi ATCC 51908]
 gi|169811390|gb|ACA85974.1| Adenylyl-sulfate kinase [Shewanella woodyi ATCC 51908]
          Length = 222

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + + L       +                 LL       G   + 
Sbjct: 53  FTGLSGSGKSTVANAVDKLLYDLGCKTY-----------------LLDGDNVRHGLNGDL 95

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +  +  G ++        S A+     + + L    L +   
Sbjct: 96  GFSDKDRVENIRRIGEVSKLFVDAGLLV--------STAFISPFIADRDLVRKQLAD--K 145

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           Q +     + +D P+++  +R
Sbjct: 146 QFIE----VFIDTPLEVCEER 162


>gi|42741719|gb|AAS45117.1| ATPase subunit [Alcaligenes faecalis]
          Length = 591

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 13/81 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L  +   VH+T         +     L +  V 
Sbjct: 337 MGKG---------GVGKTTLAAAIAVELAHRGLPVHLTTSDPAAHLTDTLDSSLDNLTVS 387

Query: 61  EFGAEAEAIVFAAARLDHVEN 81
                AE   +      HV  
Sbjct: 388 RIDPHAETERY----RQHVLE 404


>gi|68053499|gb|AAY85169.1| arsenite transporter ATPase-like protein [Leptospirillum
           ferriphilum]
          Length = 591

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 13/81 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L  +   VH+T         +     L +  V 
Sbjct: 337 MGKG---------GVGKTTLAAAIAVELAHRGLPVHLTTSDPAAHLTDTLDSSLDNLTVS 387

Query: 61  EFGAEAEAIVFAAARLDHVEN 81
                AE   +      HV  
Sbjct: 388 RIDPHAETERY----RQHVLE 404


>gi|85375431|ref|YP_459493.1| hypothetical protein ELI_13020 [Erythrobacter litoralis HTCC2594]
 gi|84788514|gb|ABC64696.1| hypothetical protein ELI_13020 [Erythrobacter litoralis HTCC2594]
          Length = 177

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T +  L                 G     EAAR +L   G  E  A+ 
Sbjct: 9   IAITGAPGAGKSTLLHALGDR--------------GWLVVPEAARTILQRPGGMELRAD- 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
           +   FA A L+ ++     A+  G+ ++ DR      A+      +    +D+
Sbjct: 54  DPDGFAMAMLE-MDRAAFEAVQPGQTVIFDRGFCDIVAFLRIEGRAAMPEVDA 105


>gi|15613378|ref|NP_241681.1| ABC transporter ATP-binding protein [Bacillus halodurans C-125]
 gi|10173429|dbj|BAB04534.1| ABC transporter (ATP-binding protein) [Bacillus halodurans C-125]
          Length = 611

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           G  GAGKTT I LL RF +     ++V  E   T   E+ R 
Sbjct: 398 GPTGAGKTTIIRLLSRFYEWDGGAIYVDGEDVTTWDRESYRR 439


>gi|154245031|ref|YP_001415989.1| nitrate ABC transporter, ATPase subunits C and D [Xanthobacter
           autotrophicus Py2]
 gi|154159116|gb|ABS66332.1| nitrate ABC transporter, ATPase subunits C and D [Xanthobacter
           autotrophicus Py2]
          Length = 573

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK 25
           M  G FI+  G  G GK+T +S++ 
Sbjct: 325 MKKGEFITLIGHSGCGKSTVLSMVA 349


>gi|305665617|ref|YP_003861904.1| guanylate kinase [Maribacter sp. HTCC2170]
 gi|88710373|gb|EAR02605.1| guanylate kinase [Maribacter sp. HTCC2170]
          Length = 197

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          M  G  I F    G+GKTT +  L
Sbjct: 1  MKGGKLIIFSAPSGSGKTTIVKHL 24


>gi|87300953|ref|ZP_01083795.1| putative bifunctional enzyme; pantothenate
           synthetase/cytidylatekinase [Synechococcus sp. WH 5701]
 gi|87284824|gb|EAQ76776.1| putative bifunctional enzyme; pantothenate
           synthetase/cytidylatekinase [Synechococcus sp. WH 5701]
          Length = 530

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFL 28
           MN    ++ +G  GAGK+T   +L R L
Sbjct: 292 MNRPPIVAIDGPAGAGKSTVTRVLARRL 319


>gi|163845642|ref|YP_001633686.1| LAO/AO transport system ATPase [Chloroflexus aurantiacus J-10-fl]
 gi|222523348|ref|YP_002567818.1| LAO/AO transport system ATPase [Chloroflexus sp. Y-400-fl]
 gi|163666931|gb|ABY33297.1| LAO/AO transport system ATPase [Chloroflexus aurantiacus J-10-fl]
 gi|222447227|gb|ACM51493.1| LAO/AO transport system ATPase [Chloroflexus sp. Y-400-fl]
          Length = 316

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGV 59
           G  GAGK+T ++ L +  +++   V  V  +P     GG    +  R   L    
Sbjct: 52  GPPGAGKSTLVTALAQEWRKRGVPVGIVAVDPSSPFSGGAVLGDRIRMQALGGDP 106


>gi|332036178|gb|EGI72652.1| various polyols ABC transporter, ATP-binding component
          [Pseudoalteromonas haloplanktis ANT/505]
          Length = 333

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 26 IKDGEFIVFVGPSGCGKSTLLRMIA 50


>gi|322806714|emb|CBZ04283.1| signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1)
           [Clostridium botulinum H04402 065]
          Length = 449

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L   L+++N    +       PAA     V+   +   V   G +  
Sbjct: 108 GLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLN 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  + A ++H +N       +  +++ D            R       +D L  I
Sbjct: 168 PVDISKAAIEHAKN------NKNNVVIID---------TAGRLHIDEELMDELHNI 208


>gi|291539048|emb|CBL12159.1| cytidylate kinase [Roseburia intestinalis XB6B4]
          Length = 219

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T    L + L
Sbjct: 3  IAIDGPAGAGKSTIAKRLAKKL 24


>gi|257869575|ref|ZP_05649228.1| iron compound ABC transporter [Enterococcus gallinarum EG2]
 gi|257803739|gb|EEV32561.1| iron compound ABC transporter [Enterococcus gallinarum EG2]
          Length = 263

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 19/70 (27%)

Query: 4  GLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE----------PGGT 44
          G  I   G  G+GK+T +  L R         +L  +N     T+E             +
Sbjct: 29 GKIIGLIGPNGSGKSTFLKALARILLPMEGEVYLNEQNLQTIKTKEVASQIALLSQVSDS 88

Query: 45 PAAEAARHVL 54
                R ++
Sbjct: 89 SIGLTIREIV 98


>gi|257386372|ref|YP_003176145.1| ATPase [Halomicrobium mukohataei DSM 12286]
 gi|257168679|gb|ACV46438.1| PilT protein domain protein [Halomicrobium mukohataei DSM 12286]
          Length = 629

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
             G+ IS  G  GAGK+T    +  FL   +Y V    +P      +  
Sbjct: 270 QRGVLIS--GSPGAGKSTFAQAVGEFLVDADYAVKTMEKPRDLQVGDEI 316


>gi|256784023|ref|ZP_05522454.1| ABC transporter ATP-binding protein [Streptomyces lividans TK24]
 gi|289767904|ref|ZP_06527282.1| ABC transporter ATP-binding protein [Streptomyces lividans TK24]
 gi|289698103|gb|EFD65532.1| ABC transporter ATP-binding protein [Streptomyces lividans TK24]
          Length = 539

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 11/75 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + LL   L+     V        + +  G        R +L+S       
Sbjct: 37  GPNGAGKTTLLRLLAGELRPHGGTVAVGGGLGVMRQFVGSVRDETTVRDLLVSVAPPRIR 96

Query: 64  AEAEAIVFAAARLDH 78
             A A+       +H
Sbjct: 97  EAARAV----DTAEH 107


>gi|190892630|ref|YP_001979172.1| probable ABC transporter, ATP-binding protein [Rhizobium etli
          CIAT 652]
 gi|190697909|gb|ACE91994.1| probable ABC transporter, ATP-binding protein [Rhizobium etli
          CIAT 652]
          Length = 353

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLK 25
          MN   G F+SF G  G GKTT + ++ 
Sbjct: 24 MNIEKGEFVSFLGPSGCGKTTVLRMIA 50


>gi|194476608|ref|YP_002048787.1| signal recognition particle protein (SRP54) [Paulinella
           chromatophora]
 gi|171191615|gb|ACB42577.1| signal recognition particle protein (SRP54) [Paulinella
           chromatophora]
          Length = 481

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT  + L  +L+ +   V + 
Sbjct: 107 GLQGAGKTTAAAKLALYLKNQGEKVLMV 134


>gi|241205603|ref|YP_002976699.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859493|gb|ACS57160.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM1325]
          Length = 353

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLK 25
          MN   G F+SF G  G GKTT + ++ 
Sbjct: 24 MNIEKGEFVSFLGPSGCGKTTVLRMIA 50


>gi|254368781|ref|ZP_04984794.1| conserved hypothetical protein [Francisella tularensis subsp.
          holarctica FSC022]
 gi|157121702|gb|EDO65872.1| conserved hypothetical protein [Francisella tularensis subsp.
          holarctica FSC022]
          Length = 269

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          N  + I FEG + AGK   I  +   L  +   V    +P 
Sbjct: 51 NKKVLIIFEGRDAAGKGGTIKRMMEHLNPRGAKVIALEKPS 91


>gi|153940237|ref|YP_001391747.1| signal recognition particle protein [Clostridium botulinum F str.
           Langeland]
 gi|170754416|ref|YP_001781992.1| signal recognition particle protein [Clostridium botulinum B1 str.
           Okra]
 gi|152936133|gb|ABS41631.1| signal recognition particle protein [Clostridium botulinum F str.
           Langeland]
 gi|169119628|gb|ACA43464.1| signal recognition particle protein [Clostridium botulinum B1 str.
           Okra]
 gi|295319772|gb|ADG00150.1| signal recognition particle protein [Clostridium botulinum F str.
           230613]
          Length = 449

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L   L+++N    +       PAA     V+   +   V   G +  
Sbjct: 108 GLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLN 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  + A ++H +N       +  +++ D            R       +D L  I
Sbjct: 168 PVDISKAAIEHAKN------NKNNVVIID---------TAGRLHIDEELMDELHNI 208


>gi|123440617|ref|YP_001004611.1| cell division protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087578|emb|CAL10359.1| cell division protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 507

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 310 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGDRNKIAVVAQH-- 365

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 366 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 411


>gi|116073973|ref|ZP_01471235.1| Adenylylsulfate kinase [Synechococcus sp. RS9916]
 gi|116069278|gb|EAU75030.1| Adenylylsulfate kinase [Synechococcus sp. RS9916]
          Length = 215

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  + + + L  +    +                 +L       G   + 
Sbjct: 44  FTGLSGAGKSTLANAVNQALFERGLATY-----------------VLDGDNVRHGLCKDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  L  G I+L 
Sbjct: 87  GFSDADREENIRRIGEVAKLFLDSGVIVLT 116


>gi|111021149|ref|YP_704121.1| bifunctional ABC lipid A exporter [Rhodococcus jostii RHA1]
 gi|110820679|gb|ABG95963.1| bifunctional ABC lipid A exporter [Rhodococcus jostii RHA1]
          Length = 659

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 18/106 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  ++  G  GAGKTT ++L+ RF +     + +     G   AE +R  L S       
Sbjct: 444 GQMVAIVGPTGAGKTTLVNLILRFYELDGGKILL----DGVDTAEMSRDDLRSRIGMVLQ 499

Query: 64  AEAEAIVF--------AAARLDHVENVIRPALMEGKILLCDRFLDS 101
               A +F        A  R D  E+ I+ A     +   DRF+ S
Sbjct: 500 D---AWLFGGTIRDNIAYGRPDATEDEIQAAARISYV---DRFVHS 539


>gi|23957816|gb|AAN40829.1| PanC [Synechococcus elongatus PCC 7942]
          Length = 378

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL 28
           I+ +G  GAGK+T    L + L
Sbjct: 286 IAIDGPAGAGKSTVTKRLAQQL 307


>gi|83590178|ref|YP_430187.1| cytidylate kinase [Moorella thermoacetica ATCC 39073]
 gi|83573092|gb|ABC19644.1| cytidylate kinase [Moorella thermoacetica ATCC 39073]
          Length = 229

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T   LL   L
Sbjct: 9  IAIDGPAGAGKSTVARLLAARL 30


>gi|83309974|ref|YP_420238.1| putative ABC transporter ATP-binding protein [Magnetospirillum
           magneticum AMB-1]
 gi|82944815|dbj|BAE49679.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Magnetospirillum magneticum AMB-1]
          Length = 559

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 40/123 (32%), Gaps = 18/123 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T + ++    +    +        G      A+   L    D  G   EA+ 
Sbjct: 41  GVNGAGKSTLLKIMAGIDKEYGGEAWAAE---GVKIGYLAQEPHLDPAKDVMGNVMEAVA 97

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
              A LD  E V      E    L D  ++   A QG         +D L          
Sbjct: 98  ETKALLDRFEEVSAKFAEE----LSDDEMNDLIAEQG----ELQEKIDHLNAW------- 142

Query: 131 DCT 133
           D T
Sbjct: 143 DLT 145


>gi|76798959|ref|ZP_00781160.1| excinuclease ABC, A subunit [Streptococcus agalactiae 18RS21]
 gi|76585680|gb|EAO62237.1| excinuclease ABC, A subunit [Streptococcus agalactiae 18RS21]
          Length = 937

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 629 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 661


>gi|187730773|ref|YP_001878913.1| dephospho-CoA kinase [Shigella boydii CDC 3083-94]
 gi|187427765|gb|ACD07039.1| dephospho-CoA kinase [Shigella boydii CDC 3083-94]
          Length = 206

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQAMREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|322693861|gb|EFY85707.1| multidrug resistance protein 1 [Metarhizium acridum CQMa 102]
          Length = 1280

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH 36
            + SG  ++  G  G GK+T I+LL+RF       L+    DV 
Sbjct: 1060 IKSGKMVALVGASGCGKSTMIALLQRFYDPTSGELRANGQDVK 1102


>gi|312144529|ref|YP_003995975.1| ABC transporter related protein [Halanaerobium sp. 'sapolanicus']
 gi|311905180|gb|ADQ15621.1| ABC transporter related protein [Halanaerobium sp. 'sapolanicus']
          Length = 253

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
            G  I+  G  G+GK+T +  +  +L+
Sbjct: 25 KKGELITLIGPNGSGKSTILKCINSYLK 52


>gi|307267238|ref|ZP_07548741.1| cytidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917733|gb|EFN48004.1| cytidylate kinase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 221

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 65/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    L + L     D           A +   +++    + +    A
Sbjct: 5   IAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQQGVNLIEENKIADIVQSA 64

Query: 67  EAIV----FAAARLDHVENVIRP------------------------ALMEGKILLCDRF 98
           + I+          D  E + +P                         + EGK ++ D  
Sbjct: 65  DIILEGEKIFLDGKDISEEIRKPEVSEKVSLVSKIPKVREILVQKQRKIAEGKNVVMD-- 122

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNRYSLRES 156
                           + L            PD      L   ++   KR + R    ++
Sbjct: 123 ----------GRDIGTVVL------------PDAQFKFFLTASLEERAKR-RYRELKTKN 159

Query: 157 ACLDYFER----KDVMIHEKRRQIF-LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWE 210
             + Y+E     ++    + +R    L IA +      ++D+   S + V   + NI+ E
Sbjct: 160 VNVSYYEVLKEIENRDTIDSQRDTSPLKIAEDS----IVIDTTYLSEEEVLEKLYNIIKE 215

Query: 211 LVQKRV 216
            ++  +
Sbjct: 216 GLKGEI 221


>gi|301168359|emb|CBW27949.1| cell division protein [Bacteriovorax marinus SJ]
          Length = 425

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 14/27 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L   L  +   V V
Sbjct: 229 GVNGAGKTTTIGKLATKLTAQGAKVVV 255


>gi|291543024|emb|CBL16134.1| ABC-type multidrug transport system, ATPase component
          [Ruminococcus bromii L2-63]
          Length = 303

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F +F GI GAGK+T I++L   L++ + +V +
Sbjct: 30 GSFFAFLGINGAGKSTTINILCTVLEKTSGNVKI 63


>gi|258645295|ref|ZP_05732764.1| macrolide-specific ABC-type efflux carrier MacB [Dialister
          invisus DSM 15470]
 gi|260402645|gb|EEW96192.1| macrolide-specific ABC-type efflux carrier MacB [Dialister
          invisus DSM 15470]
          Length = 238

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +N G FIS  G  GAGK+T +++L
Sbjct: 39 INKGSFISIMGPSGAGKSTLMNIL 62


>gi|239831038|ref|ZP_04679367.1| sulfate adenylyltransferase, large subunit [Ochrobactrum
           intermedium LMG 3301]
 gi|239823305|gb|EEQ94873.1| sulfate adenylyltransferase, large subunit [Ochrobactrum
           intermedium LMG 3301]
          Length = 644

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSGSGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILL 94
                 R +++     V R     G ++L
Sbjct: 510 GFSEEDRAENIRRVGEVARLMTDAGLVVL 538


>gi|37719570|gb|AAR01875.1| putative adenylylsulfate kinase [Campylobacter jejuni]
          Length = 170

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 15/94 (15%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
            G    A+     R        +    +G I++
Sbjct: 55 RQGRIDMAL----KRA----KFAKFLNNQGMIVI 80


>gi|78064972|ref|YP_367741.1| glycerol-3-phosphate transporter ATP-binding subunit
          [Burkholderia sp. 383]
 gi|123742650|sp|Q39KB9|UGPC_BURS3 RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
          UgpC
 gi|77965717|gb|ABB07097.1| glycerol 3-phosphate ABC transporter ATP-binding protein
          [Burkholderia sp. 383]
          Length = 361

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FI   G  G GK+T + ++   L+            V  T EP     A   ++  L 
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAG-LETVTDGEIAIGERVVNTLEPKDRDIAMVFQNYALY 88

Query: 57 CGVD 60
            + 
Sbjct: 89 PHMT 92


>gi|28210886|ref|NP_781830.1| ferric enterobactin transport ATP-binding protein fepC [Clostridium
           tetani E88]
 gi|28203325|gb|AAO35767.1| ferric enterobactin transport ATP-binding protein fepC [Clostridium
           tetani E88]
          Length = 265

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVL-LSCGV 59
             G  I+  G  G+GK+T +  + R L+  +  V++ ++        + A+ +  LS   
Sbjct: 25  KKGDIITIIGPNGSGKSTVLKSIGRLLKPIDGTVYLDKKLLWEMKEKDIAKEMACLSQHN 84

Query: 60  DEFGAEAEAIVFAAARLDH 78
                     + A  R+ H
Sbjct: 85  SAPKDMTIRKLIAFGRIPH 103


>gi|15827957|ref|NP_302220.1| arginine/ornithine transport system ATPase [Mycobacterium leprae
           TN]
 gi|221230434|ref|YP_002503850.1| arginine/ornithine transport system ATPase [Mycobacterium leprae
           Br4923]
 gi|13093510|emb|CAC30751.1| putative kinase [Mycobacterium leprae]
 gi|219933541|emb|CAR71893.1| putative kinase [Mycobacterium leprae Br4923]
          Length = 327

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEF 62
           G+ G GK+T I  L   L  + + V  +  +P     GG+   +  R   L+   D +
Sbjct: 61  GVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSVRTGGSILGDKTRMARLAVHPDAY 118


>gi|57168055|ref|ZP_00367194.1| guanylate kinase Cj1177c [Campylobacter coli RM2228]
 gi|305431793|ref|ZP_07400960.1| guanylate kinase [Campylobacter coli JV20]
 gi|57020429|gb|EAL57098.1| guanylate kinase Cj1177c [Campylobacter coli RM2228]
 gi|304444877|gb|EFM37523.1| guanylate kinase [Campylobacter coli JV20]
          Length = 205

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 13/95 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  GAGK+T +  L    Q + Y      TR P          + +      +   + + 
Sbjct: 10  GPSGAGKSTLLKKLFDEFQEELYFSISSTTRLPREGEQHGVDYYFITHDEFQQGIDKEQF 69

Query: 69  I-------VFAAARLDHVENVIRPALMEGKILLCD 96
           +        F    L+H +N    AL +GKI++ D
Sbjct: 70  LEWAKVHENFYGTSLEHTQN----ALNDGKIVVFD 100


>gi|86150018|ref|ZP_01068246.1| adenylyl-sulfate kinase [Campylobacter jejuni subsp. jejuni
          CF93-6]
 gi|88596809|ref|ZP_01100046.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218563019|ref|YP_002344798.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni NCTC
          11168]
 gi|85839464|gb|EAQ56725.1| adenylyl-sulfate kinase [Campylobacter jejuni subsp. jejuni
          CF93-6]
 gi|88191650|gb|EAQ95622.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360725|emb|CAL35524.1| putative adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni NCTC 11168]
          Length = 170

 Score = 36.2 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 8/70 (11%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          M +  +I    G+ G+GKTT    L   L+ K  ++            +  R +L     
Sbjct: 1  MKNNPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAY 53

Query: 60 DEFGAEAEAI 69
          D  G    A+
Sbjct: 54 DRQGRIDMAL 63


>gi|332184588|gb|AEE26842.1| UDP-galactose-lipid carrier transferase [Francisella cf. novicida
          3523]
          Length = 269

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
          N  + I FEG + AGK   I  +   L  +   V    +P 
Sbjct: 51 NKKVLIIFEGRDAAGKGGTIKRMMEHLNPRGAKVIALEKPS 91


>gi|332178713|gb|AEE14402.1| Cytidylate kinase [Thermodesulfobium narugense DSM 14796]
          Length = 224

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          + I+ +G  GAGK+T    L + L  K  D
Sbjct: 1  MIIAIDGPAGAGKSTVARELSKRLNYKYLD 30


>gi|330829198|ref|YP_004392150.1| maltose ABC transporter ATP-binding protein [Aeromonas veronii
          B565]
 gi|328804334|gb|AEB49533.1| ABC-type maltose transporter, ATP-binding protein [Aeromonas
          veronii B565]
          Length = 378

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 29 IKEGEFIVFVGPSGCGKSTLLRMIA 53


>gi|331698510|ref|YP_004334749.1| signal recognition particle protein [Pseudonocardia dioxanivorans
           CB1190]
 gi|326953199|gb|AEA26896.1| signal recognition particle protein [Pseudonocardia dioxanivorans
           CB1190]
          Length = 509

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTT    L R+L+ + + 
Sbjct: 107 GLQGSGKTTLAGKLARWLKGQGHT 130


>gi|325180376|emb|CCA14779.1| ATPbinding Cassette (ABC) Superfamily putative [Albugo laibachii
           Nc14]
          Length = 1077

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
            G +I   G  G GK+T ++ L +F++   
Sbjct: 727 RGAYICIVGPSGCGKSTLLACLMQFIEADG 756


>gi|324325806|gb|ADY21066.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis
          serovar finitimus YBT-020]
          Length = 330

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|308063018|gb|ADO04905.1| shikimate kinase [Helicobacter pylori Sat464]
          Length = 162

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 48/197 (24%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVRGIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131
             +D ++ +  P ++   G I++ D                      +L+ +        
Sbjct: 62  NLIDELKTLKTPHIISTGGGIVMHD----------------------NLKGLGT------ 93

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T  L +  +  +KR+  +   +     D    +   + EKR+ ++   A        I+
Sbjct: 94  -TFYLKMDFETLIKRLNQKEREKRPLLNDL--AQAKELFEKRQALYEKNAS------FII 144

Query: 192 DSAHSFQSVATNILNIV 208
           D+     +    +L  +
Sbjct: 145 DARGGLNNSLKQVLQFI 161


>gi|300934111|ref|ZP_07149367.1| ABC transporter ATP-binding protein [Corynebacterium resistens DSM
           45100]
          Length = 215

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 13/97 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEFGAE--- 65
           G  G+GKTT   LL       +  V +  EP   G     +   ++     D        
Sbjct: 34  GPSGSGKTTLAKLLSGRFLPDSGKVTIDGEPVVTGRDRRRSRIALVSQSPRDACNPRWTL 93

Query: 66  ----AEAIVFAAARLDHVENVIRPALMEG-KILLCDR 97
               AE ++ A    +H   VIR  + +  K  + DR
Sbjct: 94  REIIAEPLLIA---GEHNREVIRECVEDHTKRAMLDR 127


>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
 gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
          Length = 546

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEISVQEVMPD 131
           A + +  E ++   + +   L+ D+F  S+    G   +++    +  LQE+    + PD
Sbjct: 38  ARQWELAEGLVLEMVEKD--LVPDKFTFSTLI-SGYGRANRLEDAMGWLQEMEAGGIKPD 94

Query: 132 CTII 135
             I 
Sbjct: 95  LVIF 98


>gi|291287469|ref|YP_003504285.1| guanylate kinase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884629|gb|ADD68329.1| guanylate kinase [Denitrovibrio acetiphilus DSM 12809]
          Length = 203

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 1/69 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
          N G         GAGKTT  + L        Y V + TR+P          + +      
Sbjct: 4  NKGKLFVVSAPSGAGKTTLCNRLLGRFDTIGYSVSYTTRKPRHDETDTEDYYFVDETAFK 63

Query: 61 EFGAEAEAI 69
                E +
Sbjct: 64 GMIDRDEFL 72


>gi|283957171|ref|ZP_06374635.1| putative molybdopterin-guanine dinucleotide biosynthesis protein
          [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791347|gb|EFC30152.1| putative molybdopterin-guanine dinucleotide biosynthesis protein
          [Campylobacter jejuni subsp. jejuni 1336]
          Length = 163

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M   L I+F G   +GKTT I+ +     ++N  V + +
Sbjct: 1  MKQ-LIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIK 38


>gi|255293244|dbj|BAH90333.1| ABC transporter, ATP-binding protein [uncultured bacterium]
          Length = 290

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSC 57
           + +G F+SF G  G GK+T ++++   ++     V V  EP   G        +  +L  
Sbjct: 65  IKAGEFVSFVGPSGCGKSTLLNIIAGLVKNDTGSVTVGGEPPREGRDDVGFMLQKSVLMP 124

Query: 58  GVDEFGAEAEAIVFAAARL 76
            +D      E     A R 
Sbjct: 125 WLD-VTRNVELPFTIARRR 142


>gi|302875975|ref|YP_003844608.1| ABC transporter transmembrane region [Clostridium cellulovorans
           743B]
 gi|307686691|ref|ZP_07629137.1| ABC transporter transmembrane region [Clostridium cellulovorans
           743B]
 gi|302578832|gb|ADL52844.1| ABC transporter transmembrane region [Clostridium cellulovorans
           743B]
          Length = 607

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           I+  G  GAGKTT ++LL RF +     + V     GT   + +R  L S
Sbjct: 395 IAIVGPTGAGKTTLVNLLMRFYELHGGKIMV----DGTDIKDMSRKQLRS 440


>gi|296814794|ref|XP_002847734.1| iron-sulfur clusters transporter atm1 [Arthroderma otae CBS 113480]
 gi|238840759|gb|EEQ30421.1| iron-sulfur clusters transporter atm1 [Arthroderma otae CBS 113480]
          Length = 704

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 20/99 (20%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF--------LQR----KNYDVHVTRE-----PGGTP 45
           +G  I+  G  G GK+T + LL RF        L      +   V   R+     P  TP
Sbjct: 485 AGKKIAIVGPSGCGKSTILRLLFRFYDVHEGRILIDGQDIRGLTVASLRKAIGVVPQDTP 544

Query: 46  AAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIR 84
                     +    +  A  E +  AA R  H+  +I 
Sbjct: 545 LFNNTIE--HNIRYGKIDATTEEVKMAAQRA-HIHELIE 580


>gi|238892763|ref|YP_002917497.1| putative ABC transporter [Klebsiella pneumoniae NTUH-K2044]
 gi|238545079|dbj|BAH61430.1| putative ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
          NTUH-K2044]
          Length = 373

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          ++ G F+   G  G GK+T + LL           +L  +N      RE
Sbjct: 41 IHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITATTPRE 89


>gi|228923540|ref|ZP_04086821.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
 gi|228836117|gb|EEM81477.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          huazhongensis BGSC 4BD1]
          Length = 229

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|212532467|ref|XP_002146390.1| uridylate kinase Ura6 [Penicillium marneffei ATCC 18224]
 gi|210071754|gb|EEA25843.1| uridylate kinase Ura6 [Penicillium marneffei ATCC 18224]
          Length = 209

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 58/215 (26%), Gaps = 47/215 (21%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T    L R      L   +       RE  G+   E  RH +    +     
Sbjct: 19  GGPGAGKGTQSENLVRDYGFNHLSAGDLLRAEQVRE--GSEYGELIRHHIREGTIVPMEV 76

Query: 65  EAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
               +    AA L+   +   PA          RFL   +  Q          +D     
Sbjct: 77  TVALLSNAMAAILEQNSSKTTPA----------RFLIDGFPRQ----------IDQAHFF 116

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
                +    + L  P D+ + R+  R         D  E          R+ F    + 
Sbjct: 117 EETVCVSKLVLFLVCPEDVMMGRLLKRGET-SGRDDDNIES--------IRKRFRTFEQT 167

Query: 183 --------NQPDRCHIVDSAHSFQSVATNILNIVW 209
                       +   V +  S + V   I   + 
Sbjct: 168 SMPVVHEFEAKGKVISVQATGSKEEVYERIQAELK 202


>gi|206974996|ref|ZP_03235911.1| ABC transporter, ATP-binding protein [Bacillus cereus H3081.97]
 gi|217959273|ref|YP_002337821.1| ABC transporter, ATP-binding protein [Bacillus cereus AH187]
 gi|229138491|ref|ZP_04267080.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-ST26]
 gi|206747015|gb|EDZ58407.1| ABC transporter, ATP-binding protein [Bacillus cereus H3081.97]
 gi|217064605|gb|ACJ78855.1| ABC transporter, ATP-binding protein [Bacillus cereus AH187]
 gi|228645028|gb|EEL01271.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-ST26]
          Length = 330

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|163754408|ref|ZP_02161530.1| guanylate kinase [Kordia algicida OT-1]
 gi|161325349|gb|EDP96676.1| guanylate kinase [Kordia algicida OT-1]
          Length = 193

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          M  G  I F    GAGKTT +  L
Sbjct: 1  MKRGKLIVFAAPSGAGKTTIVHHL 24


>gi|145299614|ref|YP_001142455.1| ABC-type maltose transporter, ATP-binding protein [Aeromonas
          salmonicida subsp. salmonicida A449]
 gi|142852386|gb|ABO90707.1| ABC-type maltose transporter, ATP-binding protein [Aeromonas
          salmonicida subsp. salmonicida A449]
          Length = 378

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + ++ 
Sbjct: 29 IKEGEFIVFVGPSGCGKSTLLRMIA 53


>gi|19074315|ref|NP_585821.1| similarity to adenylate kinase (fragment) [Encephalitozoon cuniculi
           GB-M1]
 gi|74664244|sp|Q8SVC2|KADL_ENCCU RecName: Full=Adenylate kinase-like protein
 gi|19068957|emb|CAD25425.1| similarity to adenylate kinase (fragment) [Encephalitozoon cuniculi
           GB-M1]
          Length = 123

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  I +D+  D  + R+  R   R+    +   RK  M++ K     L+  +    +   
Sbjct: 47  DLVIFIDVDEDTCISRICGRNEGRDDDDEE-VGRKRCMVYNKETAPVLEFYKRH-GKLLT 104

Query: 191 VDSAHSFQSVATNILNIVW 209
           ++   S  +V   I   + 
Sbjct: 105 INGCASPGTVFEEIRRSIE 123


>gi|77409271|ref|ZP_00785977.1| excinuclease ABC, A subunit [Streptococcus agalactiae COH1]
 gi|77172103|gb|EAO75266.1| excinuclease ABC, A subunit [Streptococcus agalactiae COH1]
          Length = 937

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 629 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 661


>gi|191171151|ref|ZP_03032701.1| adenylylsulfate kinase [Escherichia coli F11]
 gi|300976241|ref|ZP_07173338.1| adenylylsulfate kinase [Escherichia coli MS 200-1]
 gi|190908451|gb|EDV68040.1| adenylylsulfate kinase [Escherichia coli F11]
 gi|300308586|gb|EFJ63106.1| adenylylsulfate kinase [Escherichia coli MS 200-1]
 gi|324015509|gb|EGB84728.1| adenylylsulfate kinase [Escherichia coli MS 60-1]
          Length = 201

 Score = 36.2 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T   +L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGVLEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|329766345|ref|ZP_08257891.1| cytidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137114|gb|EGG41404.1| cytidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 186

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 13/95 (13%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I   G    GKTT    L +          +T   GG    E A+        D++    
Sbjct: 5  IVISGPPAVGKTTVAKGLAKEFN-------LTYLSGGDILKELAKEQGFDVTGDDWWDTE 57

Query: 67 EAIVFAAARLDH------VENVIRPALMEGKILLC 95
            + F   R  H      V++ +     +G +++ 
Sbjct: 58 SGMKFLNQRETHSEFDKKVDDKLIQLYNKGGMVIT 92


>gi|330447182|ref|ZP_08310832.1| signal recognition particle-docking protein FtsY [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491373|dbj|GAA05329.1| signal recognition particle-docking protein FtsY [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 458

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 261 GVNGVGKTTTIGKLAKQFQSEGKSVMLAA--GDTFRAAAVEQLQVWGERNHVPVVAQH-- 316

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I  A  +   +++ D            R  ++   ++ L++I 
Sbjct: 317 TGADSASVIFDAIESAKAKNIDVVIAD---------TAGRLQNKGNLMEELRKIV 362


>gi|325479298|gb|EGC82394.1| guanylate kinase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 202

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
          M  G  +   G  G GK T +  L        Y V   TR+         +         
Sbjct: 1  MKKGFLLVISGPSGVGKGTVLHDLMNTQTNLVYSVSATTRKKREGEIEGVSYFYKNHDEF 60

Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94
          ++   E + + +A    ++    ++ +   + EGKI++
Sbjct: 61 EQMIEEGKFLEYAHVHNNYYGTPKDFVENKINEGKIVI 98


>gi|309811511|ref|ZP_07705293.1| adenylyl-sulfate kinase [Dermacoccus sp. Ellin185]
 gi|308434562|gb|EFP58412.1| adenylyl-sulfate kinase [Dermacoccus sp. Ellin185]
          Length = 183

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 21/72 (29%), Gaps = 17/72 (23%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G+ GAGK+T    L   L+ +   V                  LL          A    
Sbjct: 15 GLSGAGKSTLAERLVATLRERGERVE-----------------LLDGDELRTSLSAGLGF 57

Query: 71 FAAARLDHVENV 82
            A R  HV  V
Sbjct: 58 SRADRNTHVTRV 69


>gi|304415063|ref|ZP_07395805.1| putative kinase [Candidatus Regiella insecticola LSR1]
 gi|304283084|gb|EFL91505.1| putative kinase [Candidatus Regiella insecticola LSR1]
          Length = 162

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          + I F G+ G+GK+T    L   L      V
Sbjct: 1  MLIIFSGLPGSGKSTIAYTLSERLNAVYLRV 31


>gi|303260998|ref|ZP_07346947.1| excinuclease ABC subunit A [Streptococcus pneumoniae SP14-BS292]
 gi|303265490|ref|ZP_07351390.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS457]
 gi|303267952|ref|ZP_07353754.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS458]
 gi|302637835|gb|EFL68321.1| excinuclease ABC subunit A [Streptococcus pneumoniae SP14-BS292]
 gi|302642648|gb|EFL72993.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS458]
 gi|302644930|gb|EFL75177.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS457]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQRLNRN 666


>gi|296450807|ref|ZP_06892558.1| conserved hypothetical protein [Clostridium difficile NAP08]
 gi|296260368|gb|EFH07212.1| conserved hypothetical protein [Clostridium difficile NAP08]
          Length = 181

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 52/164 (31%), Gaps = 27/164 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN G  I   G  G GKTT  S++ +        VH+  +      ++ A    L    +
Sbjct: 1   MNQGRIIVITGAPGTGKTTTASVVAKE-SDLEKSVHMHTDDFYHYLSKGAIPPHLPESNE 59

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-S 119
           +     EA + AA R              G  ++ D                   FL+  
Sbjct: 60  QNLIVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
           L  I  +       I+L    +  +KR   R  L     ++  E
Sbjct: 97  LN-IVQEHYEVHY-IVLRASKEETMKRAIERSKLDRETNIELVE 138


>gi|291518203|emb|CBK73424.1| ABC-type transport system involved in Fe-S cluster assembly,
          ATPase component [Butyrivibrio fibrisolvens 16/4]
          Length = 246

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLL 24
          G FI   G  G GK+T   L+
Sbjct: 32 GKFIVITGPNGGGKSTLAKLI 52


>gi|256045538|ref|ZP_05448421.1| signal recognition particle receptor FTSY [Brucella melitensis bv.
           1 str. Rev.1]
 gi|260562848|ref|ZP_05833334.1| cell division protein FtsY [Brucella melitensis bv. 1 str. 16M]
 gi|260152864|gb|EEW87956.1| cell division protein FtsY [Brucella melitensis bv. 1 str. 16M]
          Length = 465

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 269 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 324

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 325 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 370


>gi|228984879|ref|ZP_04145049.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar tochigiensis BGSC 4Y1]
 gi|228774829|gb|EEM23225.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar tochigiensis BGSC 4Y1]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229096271|ref|ZP_04227244.1| ABC transporter ATP-binding protein [Bacillus cereus Rock3-29]
 gi|228687231|gb|EEL41136.1| ABC transporter ATP-binding protein [Bacillus cereus Rock3-29]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229102386|ref|ZP_04233094.1| ABC transporter ATP-binding protein [Bacillus cereus Rock3-28]
 gi|229115226|ref|ZP_04244636.1| ABC transporter ATP-binding protein [Bacillus cereus Rock1-3]
 gi|228668366|gb|EEL23798.1| ABC transporter ATP-binding protein [Bacillus cereus Rock1-3]
 gi|228681033|gb|EEL35202.1| ABC transporter ATP-binding protein [Bacillus cereus Rock3-28]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|227113553|ref|ZP_03827209.1| putative sugar ABC transporter ATP-binding protein
          [Pectobacterium carotovorum subsp. brasiliensis
          PBR1692]
          Length = 361

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +NSG F+ F G  G GK+T + ++ 
Sbjct: 26 INSGEFVVFVGPSGCGKSTLLRMIA 50


>gi|254492842|ref|ZP_05106013.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|226511882|gb|EEH61227.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
          Length = 177

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
           FEG + AGK   I      L  +   V    +P  T   + 
Sbjct: 89  FEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPTDTERGQW 129


>gi|239630696|ref|ZP_04673727.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301067846|ref|YP_003789869.1| hypothetical protein LCAZH_2834 [Lactobacillus casei str. Zhang]
 gi|239526979|gb|EEQ65980.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300440253|gb|ADK20019.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
          Length = 173

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 46/159 (28%), Gaps = 38/159 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN    I   G  G+GKTT  + L+  L                 + +  R  +L+    
Sbjct: 1   MNR--LIILRGNSGSGKTTTATALRTQLAN-----------TLLVSQDVVRRDMLAEKDK 47

Query: 61  EFGAEAEAIVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
                 E I   A   L H   VI   ++        R+                  L +
Sbjct: 48  PGNPTIELIETIARFGLQHQRTVILEGILSAA-----RY---------------GDMLKT 87

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
           L   + Q          DL  D  L+R  +R   +E   
Sbjct: 88  LIAEADQS----LVYYYDLSFDETLRRHAHRAKAKEFGA 122


>gi|154483279|ref|ZP_02025727.1| hypothetical protein EUBVEN_00980 [Eubacterium ventriosum ATCC
           27560]
 gi|149735789|gb|EDM51675.1| hypothetical protein EUBVEN_00980 [Eubacterium ventriosum ATCC
           27560]
          Length = 704

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%)

Query: 141 DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
           +  LK + N     E    +  E+    IH + R    ++A    +R H++D
Sbjct: 631 EEHLKEIVNISGKDEKTIAERLEKHREEIHRRIRDEHPEMAERFKERRHVLD 682


>gi|119503518|ref|ZP_01625601.1| signal recognition particle-docking protein FtsY [marine gamma
           proteobacterium HTCC2080]
 gi|119460580|gb|EAW41672.1| signal recognition particle-docking protein FtsY [marine gamma
           proteobacterium HTCC2080]
          Length = 339

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L    + +   V +    G T  A A   +      +E    A+   
Sbjct: 143 GVNGAGKTTTIGKLAHRFKAEGKQVMLAA--GDTFRAAAVEQLQAWGERNEVPVIAQH-- 198

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  IL+ D
Sbjct: 199 TGADSASVLFDAVQAAKARGVDILIAD 225


>gi|160901025|ref|YP_001566607.1| ABC transporter-like protein [Delftia acidovorans SPH-1]
 gi|160366609|gb|ABX38222.1| ABC transporter related [Delftia acidovorans SPH-1]
          Length = 352

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI F G  G GK+T + L+ 
Sbjct: 28 RGEFIVFVGPSGCGKSTLLRLIA 50


>gi|86609860|ref|YP_478622.1| bifunctional pantoate ligase/cytidylate kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|108860877|sp|Q2JJ30|PANCY_SYNJB RecName: Full=Bifunctional pantoate ligase/cytidylate kinase;
           Includes: RecName: Full=Pantoate--beta-alanine ligase;
           AltName: Full=Pantoate-activating enzyme; AltName:
           Full=Pantothenate synthetase; Includes: RecName:
           Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
           monophosphate kinase; Short=CMP kinase
 gi|86558402|gb|ABD03359.1| pantoate--beta-alanine ligase/cytidylate kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 542

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ 29
            I+ +G  GAGK+T    +   LQ
Sbjct: 312 LIAIDGPAGAGKSTVARAVAAQLQ 335


>gi|115474427|ref|NP_001060810.1| Os08g0109300 [Oryza sativa Japonica Group]
 gi|42408375|dbj|BAD09526.1| putative adenylate kinase, chloroplast (ATP-AMP transphosphorylase)
           [Oryza sativa Japonica Group]
 gi|113622779|dbj|BAF22724.1| Os08g0109300 [Oryza sativa Japonica Group]
 gi|125559894|gb|EAZ05342.1| hypothetical protein OsI_27547 [Oryza sativa Indica Group]
 gi|215692712|dbj|BAG88132.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694891|dbj|BAG90082.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 290

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 68/242 (28%), Gaps = 63/242 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G   +GK T   L+K                    A +  R  + +   +   A+     
Sbjct: 80  GAPASGKGTQCELIKSK-----------YGLVHISAGDLLRAEIAAGSENGKRAKE---- 124

Query: 71  FAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +   V          E +++P   E    L D +  S          SQ + L++L
Sbjct: 125 -FMEKGQLVPDEIVVNMVKERLLQPDAQEKGW-LLDGYPRSY---------SQAMALETL 173

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFERKD 166
                  + PD  I+LD+P ++ ++RV  R                           ++ 
Sbjct: 174 N------IRPDIFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQRF 227

Query: 167 VMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219
               EK         Q    +     D    V        V   I   +   + K+   +
Sbjct: 228 DDTEEKVKLRLQTHYQNVESLLSIYEDVIVEVKGDALVDDVFAEIDKQLTSSLDKKTEMV 287

Query: 220 SS 221
           +S
Sbjct: 288 AS 289


>gi|47565465|ref|ZP_00236506.1| ABC transporter ATP-binding protein [Bacillus cereus G9241]
 gi|47557455|gb|EAL15782.1| ABC transporter ATP-binding protein [Bacillus cereus G9241]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|113477230|ref|YP_723291.1| hypothetical protein Tery_3770 [Trichodesmium erythraeum IMS101]
 gi|110168278|gb|ABG52818.1| conserved hypothetical protein [Trichodesmium erythraeum IMS101]
          Length = 455

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLL 55
           G GK+T +  LK  L+++ Y V            +     +LL
Sbjct: 73  GCGKSTELFRLKDKLEKQGYHVVYFESSEDLDMGDVDISDILL 115


>gi|329945750|ref|ZP_08293437.1| adenylate kinase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528198|gb|EGF55176.1| adenylate kinase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 195

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 47/215 (21%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  GAGK T  + +   L         T         +  R  +   G  E G  A+
Sbjct: 6   VLLGPPGAGKGTQAARIAERL---GIPAIST--------GDIFRANV--AGATELGTRAK 52

Query: 68  AIVFAAARLDHVENVIRPA-----LMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDS 119
           A +    + ++V + I  A     + +   +   L D +  ++         +Q   LDS
Sbjct: 53  AYM---DKGEYVPDSITNAMVGDRIAQNDCVAGFLLDGYPRTT---------AQVGELDS 100

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +  +    +  D  + +    +  + R+  R    E    D  + + V+ H    +++ +
Sbjct: 101 M--LKTSGLALDVVVEITADAEAVVARLLKRAG--EQGRAD--DTEPVIRHR--LEVYAE 152

Query: 180 ----IARNQPDR--CHIVDSAHSFQSVATNILNIV 208
               +A    +R     VD       V   IL  +
Sbjct: 153 STAPLAGIYAERGLLVQVDGMGEIDVVTARILEAL 187


>gi|315033394|gb|EFT45326.1| conserved hypothetical protein [Enterococcus faecalis TX0017]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|308174734|ref|YP_003921439.1| ABC transporter ATP-binding protein [Bacillus amyloliquefaciens
          DSM 7]
 gi|307607598|emb|CBI43969.1| putative ABC transporter component, ATP-binding [Bacillus
          amyloliquefaciens DSM 7]
 gi|328554666|gb|AEB25158.1| ABC transporter component, ATP-binding protein [Bacillus
          amyloliquefaciens TA208]
 gi|328913074|gb|AEB64670.1| putative ABC transporter component, ATP-binding protein [Bacillus
          amyloliquefaciens LL3]
          Length = 260

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FISF G  G GKTT +S+L 
Sbjct: 32 KGDFISFLGPSGCGKTTLLSILA 54


>gi|290512160|ref|ZP_06551527.1| sugar ABC transporter [Klebsiella sp. 1_1_55]
 gi|289775155|gb|EFD83156.1| sugar ABC transporter [Klebsiella sp. 1_1_55]
          Length = 357

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          ++ G F+   G  G GK+T + LL           +L  +N      RE
Sbjct: 24 IHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITATTPRE 72


>gi|283784553|ref|YP_003364418.1| ABC transporter ATP-binding protein [Citrobacter rodentium
          ICC168]
 gi|282948007|emb|CBG87571.1| ABC transporter ATP-binding protein [Citrobacter rodentium
          ICC168]
          Length = 578

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 11 GIEGAGKTTHISLLKRFLQR 30
          G +GAGKTT + +L   L+ 
Sbjct: 40 GPDGAGKTTLMRMLAGLLKA 59


>gi|261749635|ref|YP_003257321.1| cytidylate kinase [Blattabacterium sp. (Periplaneta americana)
          str. BPLAN]
 gi|261497728|gb|ACX84178.1| cytidylate kinase [Blattabacterium sp. (Periplaneta americana)
          str. BPLAN]
          Length = 233

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          MN  + I+ +G   +GK+T    L + L   + D
Sbjct: 1  MNPKMIITIDGYSSSGKSTLAQALSKRLAYSHID 34


>gi|288942586|ref|YP_003444826.1| signal recognition particle-docking protein FtsY [Allochromatium
           vinosum DSM 180]
 gi|288897958|gb|ADC63794.1| signal recognition particle-docking protein FtsY [Allochromatium
           vinosum DSM 180]
          Length = 422

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L + LQ +   V +
Sbjct: 228 GVNGAGKTTTIGKLAKRLQEEGNSVML 254


>gi|260949107|ref|XP_002618850.1| hypothetical protein CLUG_00009 [Clavispora lusitaniae ATCC
          42720]
 gi|238846422|gb|EEQ35886.1| hypothetical protein CLUG_00009 [Clavispora lusitaniae ATCC
          42720]
          Length = 290

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
           I+F G+  +GKTT    L   L++K  +     +PG   
Sbjct: 3  LITFTGLPCSGKTTWAKKLIALLEKKIEEAKAGDQPGHNY 42


>gi|229547259|ref|ZP_04435984.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
 gi|229307594|gb|EEN73581.1| conserved hypothetical protein [Enterococcus faecalis TX1322]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|229155365|ref|ZP_04283475.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 4342]
 gi|228628080|gb|EEK84797.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 4342]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|227328455|ref|ZP_03832479.1| putative sugar ABC transporter ATP-binding protein
          [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 361

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +NSG F+ F G  G GK+T + ++ 
Sbjct: 26 INSGEFVVFVGPSGCGKSTLLRMIA 50


>gi|226947999|ref|YP_002803090.1| ABC transporter, ATP-binding protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|226843025|gb|ACO85691.1| ABC transporter, ATP-binding protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 517

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 9/92 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56
           M  G  I+  G  G GKTT I  L   L+  N +V ++             E    ++L 
Sbjct: 346 MKRGQKIAITGANGIGKTTLIKTLLGLLKPINGEVTLSDYKKIGYFEQEIMEYNDSLVLY 405

Query: 57  CGVDEFGAEAE-----AIVFAAARLDHVENVI 83
              +EF    +     ++        H+++ I
Sbjct: 406 DVWNEFPDLTQTEVRSSLAKCGLTRQHIDSPI 437


>gi|226328975|ref|ZP_03804493.1| hypothetical protein PROPEN_02877 [Proteus penneri ATCC 35198]
 gi|225202161|gb|EEG84515.1| hypothetical protein PROPEN_02877 [Proteus penneri ATCC 35198]
          Length = 184

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 34/93 (36%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           +G F +  G  GAGK+T I ++   + + +  V V      T    A R + L      F
Sbjct: 30  AGDFYALLGPNGAGKSTTIGIISSLVNKSSGKVKVFGYDTDTDMVNAKRQLGLVPQEFNF 89

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                 +     +  +     + AL   +I L 
Sbjct: 90  NPFETVLQIVLNQAGYYGVPRKLALERAEIYLT 122


>gi|218133684|ref|ZP_03462488.1| hypothetical protein BACPEC_01553 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991059|gb|EEC57065.1| hypothetical protein BACPEC_01553 [Bacteroides pectinophilus ATCC
           43243]
          Length = 413

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 11/46 (23%)

Query: 1   MNSG------LFISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVT 38
           M  G      +FI   G  G GKTT I+ L  +  L+++     +T
Sbjct: 209 MTKGDKPKVIMFI---GPTGVGKTTTIAKLASYYKLEKQYKVAFIT 251


>gi|209550220|ref|YP_002282137.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535976|gb|ACI55911.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM2304]
          Length = 353

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 1  MN--SGLFISFEGIEGAGKTTHISLLK 25
          MN   G F+SF G  G GKTT + ++ 
Sbjct: 24 MNIEKGEFVSFLGPSGCGKTTVLRMIA 50


>gi|149203855|ref|ZP_01880824.1| hypothetical protein RTM1035_07303 [Roseovarius sp. TM1035]
 gi|149142972|gb|EDM31014.1| hypothetical protein RTM1035_07303 [Roseovarius sp. TM1035]
          Length = 289

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
           I FEG + AGK   I   + +L  +   V    +P    
Sbjct: 76  IVFEGRDAAGKGGTIKRFREYLNPRGARVVALSKPSDVE 114


>gi|149187815|ref|ZP_01866111.1| putative ATP-binding component of ABC transporter [Vibrio
          shilonii AK1]
 gi|148838211|gb|EDL55152.1| putative ATP-binding component of ABC transporter [Vibrio
          shilonii AK1]
          Length = 342

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI+  G  G GK+T +  L 
Sbjct: 26 IQKGEFITLLGPSGCGKSTLLRSLA 50


>gi|148243366|ref|YP_001228523.1| adenylylsulfate kinase [Synechococcus sp. RCC307]
 gi|147851676|emb|CAK29170.1| Adenylylsulfate kinase [Synechococcus sp. RCC307]
          Length = 215

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + +   L  +    +                 +L       G   + 
Sbjct: 44  FTGLSGSGKSTLANAVNAALFERGLATY-----------------VLDGDNIRHGLCKDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  L  G I+L 
Sbjct: 87  GFSDADREENIRRIGEVAKLFLDAGVIVLT 116


>gi|146338588|ref|YP_001203636.1| putative shikimate kinase [Bradyrhizobium sp. ORS278]
 gi|146191394|emb|CAL75399.1| conserved hypothetical protein; putative Shikimate kinase
          [Bradyrhizobium sp. ORS278]
          Length = 196

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 16/44 (36%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
          G  I   G  GAGK+T   LL   LQ +   +   R        
Sbjct: 9  GKDIILIGPMGAGKSTQAKLLAEALQLRRCSLDQVRWDYYREIG 52


>gi|91214939|ref|ZP_01251911.1| adenylylsulfate kinase [Psychroflexus torquis ATCC 700755]
 gi|91186544|gb|EAS72915.1| adenylylsulfate kinase [Psychroflexus torquis ATCC 700755]
          Length = 197

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 30/139 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++  L  K                +  R    S      G   E 
Sbjct: 30  FTGLSGSGKSTIANKVEEELFYKGIH-------TYALDGDNIR----SGINKGLGFTKE- 77

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                 R +++  +   A +         F+DS         S      D ++EI   E 
Sbjct: 78  -----DRYENLRRIAEVAKL---------FVDSGVVTIAAFVSPLISDRDQVKEIVGHE- 122

Query: 129 MPDCT-IILDLPVDIGLKR 146
             D   I +D  ++    R
Sbjct: 123 --DLIEIYVDTSLEECENR 139


>gi|55742268|ref|NP_001006743.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Xenopus
           (Silurana) tropicalis]
 gi|49523166|gb|AAH75507.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Xenopus
           (Silurana) tropicalis]
          Length = 624

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 7/57 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+ GAGKTT    L+ +L            P  T   +  RH L            E
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRHGLSKNLGFSQEDREE 108


>gi|29375131|ref|NP_814284.1| hypothetical protein EF0503 [Enterococcus faecalis V583]
 gi|21693283|gb|AAM75230.1|AF454824_24 EF0024 [Enterococcus faecalis]
 gi|29342590|gb|AAO80355.1| hypothetical protein EF_0503 [Enterococcus faecalis V583]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|33861024|ref|NP_892585.1| guanylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|45477096|sp|Q7V2K9|KGUA_PROMP RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|33639756|emb|CAE18926.1| Guanylate kinase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
          Length = 184

 Score = 35.8 bits (82), Expect = 4.0,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 42/217 (19%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M +    I   G  G GK T I  L    +     +   TR P      +   + +    
Sbjct: 1   MKNLKKLIIITGPSGVGKGTVIKELLDRNKDIWLSISATTRNPRVGEKDDLNYYFIGEER 60

Query: 59  VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
             +   + E +    FA        + +   + +G I+L                    +
Sbjct: 61  FKDMIDKKEFLEWAQFAGNYYGTPLSTVNEKIEKGFIVLL------------------EI 102

Query: 116 FLDSLQEISVQEVMPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
            ++  ++I  +E  P+  +I L LP   +   KR++NR + +E   +D            
Sbjct: 103 EVEGAKQI--KEKFPESLSIFL-LPPSKEELEKRIRNRGTEKE-EAIDR---------RL 149

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            R  + +IA +      +  + H        +L I+ 
Sbjct: 150 SRANY-EIASSNQFDFVL--TNHDVDETVKEVLKIIK 183


>gi|325297211|ref|YP_004257128.1| signal recognition particle protein [Bacteroides salanitronis DSM
           18170]
 gi|324316764|gb|ADY34655.1| signal recognition particle protein [Bacteroides salanitronis DSM
           18170]
          Length = 441

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 16/127 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT    L R  + +KN    +       PAA     VL +       +E E  
Sbjct: 106 GLQGSGKTTFSGKLARMFKTKKNRKPLLVACDVYRPAAIEQLKVLGTQVEVPVYSEPE-- 163

Query: 70  VFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
             +   +   +N I+ A  +G  +++ D            R +     ++ ++ I    +
Sbjct: 164 --SKDPVQIAKNAIQEAKAKGYDLVIVD---------TAGRLAVDEQMMNEIETI-KNAI 211

Query: 129 MPDCTII 135
            PD T+ 
Sbjct: 212 TPDATLF 218


>gi|323489395|ref|ZP_08094624.1| excinuclease ABC subunit A [Planococcus donghaensis MPA1U2]
 gi|323396889|gb|EGA89706.1| excinuclease ABC subunit A [Planococcus donghaensis MPA1U2]
          Length = 960

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           GLFI+  G+ G+GK+T I  +L + L  +        +PG   + E  + +
Sbjct: 632 GLFIAVTGVSGSGKSTLINEILYKTLAHRLNRAKA--KPGQFDSIEGTKEL 680


>gi|307269399|ref|ZP_07550743.1| hypothetical protein HMPREF9498_01537 [Enterococcus faecalis
           TX4248]
 gi|307274817|ref|ZP_07555983.1| hypothetical protein HMPREF9521_00432 [Enterococcus faecalis
           TX2134]
 gi|306508518|gb|EFM77622.1| hypothetical protein HMPREF9521_00432 [Enterococcus faecalis
           TX2134]
 gi|306514285|gb|EFM82856.1| hypothetical protein HMPREF9498_01537 [Enterococcus faecalis
           TX4248]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|307284242|ref|ZP_07564409.1| hypothetical protein HMPREF9515_02316 [Enterococcus faecalis
           TX0860]
 gi|306503343|gb|EFM72594.1| hypothetical protein HMPREF9515_02316 [Enterococcus faecalis
           TX0860]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
 gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
          Length = 546

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 73  AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEISVQEVMPD 131
           A + +  E ++   + +   L+ D+F  S+    G   +++    +  LQE+    + PD
Sbjct: 38  ARQWELAEGLVLEMVEKD--LVPDKFTFSTLI-SGYGRANRLEDAMGWLQEMEAGGIKPD 94

Query: 132 CTII 135
             I 
Sbjct: 95  LVIF 98


>gi|284165529|ref|YP_003403808.1| cytidylate kinase [Haloterrigena turkmenica DSM 5511]
 gi|284015184|gb|ADB61135.1| cytidylate kinase [Haloterrigena turkmenica DSM 5511]
          Length = 191

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 47/173 (27%), Gaps = 34/173 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + ++  G  G+GK+T   LL               +       +  R +    G      
Sbjct: 1   MLLTVSGPPGSGKSTTAELLADRF-----------DLEHVSGGDIFRELAEERGYTPLEF 49

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
              A        D    +   A+    ++L  R         G     Q  F        
Sbjct: 50  NKLAEENDQIDRDLDRRLYEIAVERDGLVLESR-------LAGWLAGEQADFR------- 95

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                      LD P  +  +R+  R     +   +  + ++    ++ ++ +
Sbjct: 96  ---------FWLDAPPRVRGERIAEREEKDPARATEETQAREASEAKRYQEYY 139


>gi|262283510|ref|ZP_06061276.1| excinuclease ABC subunit A [Streptococcus sp. 2_1_36FAA]
 gi|262261001|gb|EEY79701.1| excinuclease ABC subunit A [Streptococcus sp. 2_1_36FAA]
          Length = 941

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI+  G+ G+GK+T ++ +LK+ L ++
Sbjct: 634 GKFIAVTGVSGSGKSTLVNSILKKTLAQR 662


>gi|257085853|ref|ZP_05580214.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|256993883|gb|EEU81185.1| conserved hypothetical protein [Enterococcus faecalis D6]
          Length = 747

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 238 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 277


>gi|228967897|ref|ZP_04128908.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          sotto str. T04001]
 gi|228791764|gb|EEM39355.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          sotto str. T04001]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|229818790|ref|YP_002880316.1| ABC transporter related [Beutenbergia cavernae DSM 12333]
 gi|229564703|gb|ACQ78554.1| ABC transporter related [Beutenbergia cavernae DSM 12333]
          Length = 343

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 20/190 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  ++F G  GAGKTT I ++    +          + P    +A     V+ + G+   
Sbjct: 62  GEIVAFLGPNGAGKTTTIDMVLGLSEPTSGEVAVFGQSPAAAISAGRVAAVMQTGGLLSD 121

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              AE +   AA      +  +P L    I  L DR         G+    Q   L    
Sbjct: 122 ITVAETVELTAALFGSDAHP-QPYLARAGIADLADR-------RVGKCSGGQQQRLRFAM 173

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            +      PD  ++LD     G+  V+ R     +   D  + + V+        +L+ A
Sbjct: 174 ALVS---EPDL-LLLD-EPTTGMD-VEGRRDFWAAIRQDAAQGRTVVF----ATHYLEEA 223

Query: 182 RNQPDRCHIV 191
               DR  +V
Sbjct: 224 DAYADRIVLV 233


>gi|281419776|ref|ZP_06250775.1| deoxynucleoside kinase family protein [Prevotella copri DSM 18205]
 gi|281406152|gb|EFB36832.1| deoxynucleoside kinase family protein [Prevotella copri DSM 18205]
          Length = 208

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 31/197 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GKTT   +L    +R  +  +   EP             L+    +    +
Sbjct: 3   IAIAGNIGSGKTTLTKMLA---KRYGWKANF--EPVDNNP-------YLADYYKDMERWS 50

Query: 67  EAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQEI 123
             + ++   +  H  +V+  +  E  I+  DR  F D+        D       D     
Sbjct: 51  FNLQIYFLNKRFH--DVVEISRSEQTIV-QDRTIFEDARIFAPNLHDIGMMSDRDFKNYT 107

Query: 124 SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
            + ++M      PD  I +   +   +K ++ R    E +         +   +   + +
Sbjct: 108 DLFDLMISLVKLPDLMIYIKSSIPTLVKHIEKRGRDFEKSIR-------IDYLQGLNKRY 160

Query: 178 LDIARNQPDRCHIVDSA 194
            D  ++   R  I+D  
Sbjct: 161 EDWIKDYKGRLIIIDGD 177


>gi|225437257|ref|XP_002275654.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 536

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 15/99 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKR--FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M  G+        GAGK+T +  +L    +       V +  E      ++     L S 
Sbjct: 210 MGGGM--------GAGKSTVLKDILAEPLWSGAAGNAVII--EADAFKESDVIYKALSSR 259

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           G  +    AE  +   +  D   +++  AL EG+ ++ D
Sbjct: 260 GHHDMLQTAE--LVHQSSTDAASSLLVTALNEGRDVIMD 296


>gi|166368176|ref|YP_001660449.1| bifunctional pantoate ligase/cytidylate kinase [Microcystis
           aeruginosa NIES-843]
 gi|166090549|dbj|BAG05257.1| pantothenate synthetase/cytidylate kinase [Microcystis aeruginosa
           NIES-843]
          Length = 516

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL 28
           I+ +G  GAGK+T   L+   L
Sbjct: 291 IAIDGPAGAGKSTVTRLVAEKL 312


>gi|154687190|ref|YP_001422351.1| YtlC [Bacillus amyloliquefaciens FZB42]
 gi|154353041|gb|ABS75120.1| YtlC [Bacillus amyloliquefaciens FZB42]
          Length = 260

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FISF G  G GKTT +S+L 
Sbjct: 32 KGDFISFLGPSGCGKTTLLSILA 54


>gi|126664539|ref|ZP_01735523.1| signal recognition particle-docking protein FtsY [Marinobacter sp.
           ELB17]
 gi|126630865|gb|EBA01479.1| signal recognition particle-docking protein FtsY [Marinobacter sp.
           ELB17]
          Length = 406

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 212 GVNGVGKTTTIGKLTKKFQDEGMSVLLAA--GDTFRAAAMEQLQVWGDRNKVPVIAQH-- 267

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I+ A   G  +++ D
Sbjct: 268 TGADSASVIFDAIQSAKSRGIDVVIAD 294


>gi|126335960|ref|XP_001376774.1| PREDICTED: similar to guanylate kinase [Monodelphis domestica]
          Length = 198

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 71/227 (31%), Gaps = 41/227 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           M     +   G  GAGK+T +  L +       + V H TR P              +  
Sbjct: 1   MTGPRPVVLSGPSGAGKSTLLKKLFQEFGNIFGFSVSHTTRNPRPGEE---------NGK 51

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
              F    E       R       I  A   G +     +  S  A Q  +  ++   LD
Sbjct: 52  DYHFVTREE-----MQRDIDAGEFIEHAEFSGNM-----YGTSKAAVQAVQAMNRICVLD 101

Query: 119 S----LQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
                ++ I   E+ P   I + +    +DI  KR+++R +  E +           +  
Sbjct: 102 IDLQGVRNIKKTELQP---IYISIQAPSLDILEKRLRDRKTETEESLQKRLTAAAADME- 157

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218
                    +  +P+   ++            +  ++ E ++K   P
Sbjct: 158 ---------SSKEPNLFDLIIINDDLDEAYLMLRKVLAEEIKKAQQP 195


>gi|117371496|gb|ABK33666.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase
           [Strongylocentrotus purpuratus]
          Length = 636

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 37/111 (33%), Gaps = 24/111 (21%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I F G+ GAGKTT    L+ +L            P      +  R  L       F
Sbjct: 79  RGCTIWFTGLSGAGKTTVSFALEEYLCHHGI-------PAYGLDGDNVRTGL--NKNLSF 129

Query: 63  GAEAEAIVFAAARLDHVENVIRPA--LMEGKILLCDRFL-----DSSYAYQ 106
             E         R +++  V   A    +G I+    F+     DS  A Q
Sbjct: 130 TPE--------DREENIRRVAEVARLFADGGIVCLSSFISPYAKDSDVARQ 172


>gi|147907088|ref|NP_001090085.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Xenopus laevis]
 gi|72679358|gb|AAI00215.1| MGC114937 protein [Xenopus laevis]
          Length = 624

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  RH L            E   
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRHGLSKNLGFSQEDREE--- 108

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                +  +  V +     G + +      S YA               + E++    +P
Sbjct: 109 ----NIRRIAEVAKLFADAGLVCIA--SFISPYA-------KDRNNARQIHEVAS---LP 152

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ I  +R
Sbjct: 153 FYEVFVDAPLYICEQR 168


>gi|22537848|ref|NP_688699.1| excinuclease ABC subunit A [Streptococcus agalactiae 2603V/R]
 gi|76788140|ref|YP_330318.1| excinuclease ABC subunit A [Streptococcus agalactiae A909]
 gi|22534743|gb|AAN00572.1|AE014269_16 excinuclease ABC, A subunit [Streptococcus agalactiae 2603V/R]
 gi|76563197|gb|ABA45781.1| UvrABC system, A protein [Streptococcus agalactiae A909]
          Length = 942

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 666


>gi|25011793|ref|NP_736188.1| excinuclease ABC subunit A [Streptococcus agalactiae NEM316]
 gi|24413334|emb|CAD47413.1| excinuclease ABC (subunit A) [Streptococcus agalactiae NEM316]
          Length = 942

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAVAQKLNRN 666


>gi|323700065|ref|ZP_08111977.1| cytidylate kinase [Desulfovibrio sp. ND132]
 gi|323459997|gb|EGB15862.1| cytidylate kinase [Desulfovibrio desulfuricans ND132]
          Length = 219

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M   L ++ +G  G GK+T    L R L
Sbjct: 1  MGKPLIVTIDGPAGVGKSTMAKRLARLL 28


>gi|313899979|ref|ZP_07833479.1| maltose/maltodextrin ABC transporter, ATP-binding protein MalK
          [Clostridium sp. HGF2]
 gi|312955031|gb|EFR36699.1| maltose/maltodextrin ABC transporter, ATP-binding protein MalK
          [Clostridium sp. HGF2]
          Length = 351

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 6  FISFEGIEGAGKTTHISLLKRFL 28
          FI   G  G GKTT + L+  FL
Sbjct: 31 FIVLAGPSGCGKTTLLQLVAGFL 53


>gi|307705863|ref|ZP_07642702.1| ABC transporter family protein [Streptococcus mitis SK597]
 gi|307620591|gb|EFN99688.1| ABC transporter family protein [Streptococcus mitis SK597]
          Length = 225

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G F    G  G+GK+T ++LL
Sbjct: 30 KGKFTVILGPSGSGKSTLLNLL 51


>gi|302551665|ref|ZP_07304007.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302469283|gb|EFL32376.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 533

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 7   ISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDE 61
           ++  G  G+GK++ + + +   L+ ++ +V   R  G  P A   R  L     + G+  
Sbjct: 285 VTLTGPSGSGKSSLLMAGVLPRLKEQDVEVVTLRAEGRLPDASVVRDELRAHRSAPGLVL 344

Query: 62  FGAEAEAIVF 71
              +AEA++ 
Sbjct: 345 AIDQAEALLL 354


>gi|297826075|ref|XP_002880920.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326759|gb|EFH57179.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 71/238 (29%), Gaps = 80/238 (33%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVH--------VTREPGGTP---AAEAARHVLLS 56
           G+ G   +GK+T  +L     +     V         V ++  G      A     +LL 
Sbjct: 5   GLTGGIASGKSTVSNL----FKASGIPVVDADVVARDVLKKGSGGWKRVVAAFGEEILLP 60

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            G  +     + +  + ++   +  ++ P +  G                        +F
Sbjct: 61  SGEVDRPKLGQIVFSSGSKRQLLNKLMAPYISSG------------------------IF 96

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--------------------DIGLKRVQNRYSLRES 156
            + L++ +         I++D+P+                    +  LKR+  R  L E 
Sbjct: 97  WEILKQWASGA----KVIVVDIPLLFEVKMDKWTKPIVVVWVSQETQLKRLVERDGLSEE 152

Query: 157 ACLDY-FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
              +    +  +             ++       ++D+  S   +      ++ E+ +
Sbjct: 153 DARNRVMAQMPLD---------SKRSKAD----LVIDNNGSLDDLHQQFDKVLSEIRK 197


>gi|291557477|emb|CBL34594.1| ABC-type multidrug transport system, ATPase and permease components
           [Eubacterium siraeum V10Sc8a]
          Length = 614

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 19/47 (40%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I+  G  GAGKTT + LL RF +     + +             R +
Sbjct: 405 IAIVGPTGAGKTTIVKLLMRFYELNGGRILIDGYDIADFDRSELREL 451


>gi|226310212|ref|YP_002770106.1| ABC transporter ATP-binding protein [Brevibacillus brevis NBRC
          100599]
 gi|226093160|dbj|BAH41602.1| ABC transporter ATP-binding protein [Brevibacillus brevis NBRC
          100599]
          Length = 361

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           G FISF G  G GKTT ++++  FL     D
Sbjct: 28 QGEFISFLGPSGCGKTTTLNMIAGFLDPDGGD 59


>gi|218547559|ref|YP_002381350.1| dephospho-CoA kinase [Escherichia fergusonii ATCC 35469]
 gi|218355100|emb|CAQ87707.1| dephospho-CoA kinase [Escherichia fergusonii ATCC 35469]
 gi|325496037|gb|EGC93896.1| dephospho-CoA kinase [Escherichia fergusonii ECD227]
          Length = 206

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 36/81 (44%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R   L +A +      ++D
Sbjct: 127 VLVIDVTPETQLKRTMRRDDVTREHV------EQILAAQATRDARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++ ++  + +Q
Sbjct: 175 NNGTADAIASDVAHLHAKYLQ 195


>gi|162447213|ref|YP_001620345.1| signal recognition particle GTPase [Acholeplasma laidlawii PG-8A]
 gi|161985320|gb|ABX80969.1| signal recognition particle GTPase [Acholeplasma laidlawii PG-8A]
          Length = 318

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 13/91 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  + +   V +    G T  A A   +       E+   A+   
Sbjct: 121 GVNGVGKTTTIGKLAKQYKDQGKKVLMVA--GDTFRAGAIEQLY------EWSKRAKVDF 172

Query: 71  FAAARLDHVENVIRPALMEGK-----ILLCD 96
           +         +VI  AL + K     ++L D
Sbjct: 173 YQKDAGSDPSSVIFEALEKAKKETYDLVLVD 203


>gi|149910023|ref|ZP_01898671.1| ABC transporter, ATP-binding protein [Moritella sp. PE36]
 gi|149806891|gb|EDM66852.1| ABC transporter, ATP-binding protein [Moritella sp. PE36]
          Length = 371

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G FI F G  G GKTT +  + 
Sbjct: 31 IHQGEFICFLGPSGCGKTTLLRAIA 55


>gi|148380407|ref|YP_001254948.1| signal recognition particle protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933476|ref|YP_001384624.1| signal recognition particle protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935337|ref|YP_001388141.1| signal recognition particle protein [Clostridium botulinum A str.
           Hall]
 gi|168180670|ref|ZP_02615334.1| signal recognition particle protein [Clostridium botulinum NCTC
           2916]
 gi|168184655|ref|ZP_02619319.1| signal recognition particle protein [Clostridium botulinum Bf]
 gi|226949802|ref|YP_002804893.1| signal recognition particle protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|237795885|ref|YP_002863437.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
           657]
 gi|148289891|emb|CAL83999.1| signal recognition particle protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|152929520|gb|ABS35020.1| signal recognition particle protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931251|gb|ABS36750.1| signal recognition particle protein [Clostridium botulinum A str.
           Hall]
 gi|182668381|gb|EDT80360.1| signal recognition particle protein [Clostridium botulinum NCTC
           2916]
 gi|182672287|gb|EDT84248.1| signal recognition particle protein [Clostridium botulinum Bf]
 gi|226841461|gb|ACO84127.1| signal recognition particle protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|229263878|gb|ACQ54911.1| signal recognition particle protein [Clostridium botulinum Ba4 str.
           657]
          Length = 449

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L   L+++N    +       PAA     V+   +   V   G +  
Sbjct: 108 GLQGAGKTTMAGKLALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLN 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +  + A ++H +N       +  +++ D            R       +D L  I
Sbjct: 168 PVDISKAAIEHAKN------NKNNVVIID---------TAGRLHIDEELMDELHNI 208


>gi|149001709|ref|ZP_01826682.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP14-BS69]
 gi|147760167|gb|EDK67156.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP14-BS69]
          Length = 811

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 608 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 640


>gi|72389544|ref|XP_845067.1| adenylate kinase [Trypanosoma brucei TREU927]
 gi|62176750|gb|AAX70850.1| adenylate kinase, putative [Trypanosoma brucei]
 gi|70801601|gb|AAZ11508.1| adenylate kinase, putative [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 260

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 62/227 (27%), Gaps = 50/227 (22%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           L I   G  G+GK T    + +       +  D+ +      TP  E     +       
Sbjct: 54  LIIV--GPPGSGKQTQARRIAKRYDAVHVRAQDIFLNEVKRRTPEGEIIERCMRDGEQVP 111

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               +E              VIR  L E  ++                D        +L 
Sbjct: 112 SHISSEL-------------VIR-RLREDDVV----------KRGWVLDGFPQTRSQAL- 146

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIH-------EK 172
            +    + P   I+LD+  ++ +KR   R     +  + + E       +H       ++
Sbjct: 147 RLQTAGLSPLLFIMLDVGNEVSVKRCAGRRYEPITRNIYHIEYLPAPSGMHLELMSPDDE 206

Query: 173 RRQIFLDIARNQPDR-----------CHIVDSAHSFQSVATNILNIV 208
            R       +    R              +D    F +V   +   V
Sbjct: 207 SRAAVASRWKYFDARRGELVGCYEPMYVRIDGDRPFDTVFAEVCEQV 253


>gi|72160829|ref|YP_288486.1| adenylylsulfate kinase [Thermobifida fusca YX]
 gi|71914561|gb|AAZ54463.1| adenylylsulfate kinase [Thermobifida fusca YX]
          Length = 493

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           F G+ G+GK+T    +   +++    V +          +  R +L
Sbjct: 323 FTGLSGSGKSTVARGVAEQIRQAGRTVTLL-------DGDVVRRLL 361


>gi|55379889|ref|YP_137739.1| cytidylate kinase [Haloarcula marismortui ATCC 43049]
 gi|59797990|sp|Q5UXH0|KCY_HALMA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|55232614|gb|AAV48033.1| cytidylate kinase [Haloarcula marismortui ATCC 43049]
          Length = 192

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + I+  G  G+GK+T    L   L 
Sbjct: 1  MLITVSGPAGSGKSTLAKSLADALN 25


>gi|21224815|ref|NP_630594.1| ABC transporter ATP-binding protein [Streptomyces coelicolor A3(2)]
 gi|3861444|emb|CAA22049.1| ABC transporter ATP-binding protein [Streptomyces coelicolor A3(2)]
          Length = 539

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 11/75 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + LL   L+     V        + +  G        R +L+S       
Sbjct: 37  GPNGAGKTTLLRLLAGELKPHGGTVAVGGGLGVMRQFVGSVRDETTVRDLLVSVAPPRIR 96

Query: 64  AEAEAIVFAAARLDH 78
             A A+       +H
Sbjct: 97  EAARAV----DTAEH 107


>gi|154248603|ref|YP_001419561.1| hypothetical protein Xaut_4684 [Xanthobacter autotrophicus Py2]
 gi|154162688|gb|ABS69904.1| protein of unknown function DUF344 [Xanthobacter autotrophicus Py2]
          Length = 367

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 144 ILFEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPSDVERGQW----------------- 186

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    ++H+          G+I+L DR   
Sbjct: 187 ----YFQRYVEHLPT-------RGEIVLFDRSWY 209


>gi|329576997|gb|EGG58475.1| hypothetical protein HMPREF9520_01207 [Enterococcus faecalis
          TX1467]
          Length = 518

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 9  GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 48


>gi|326796886|ref|YP_004314706.1| glycerol-3-phosphate-transporting ATPase [Marinomonas mediterranea
           MMB-1]
 gi|326547650|gb|ADZ92870.1| Glycerol-3-phosphate-transporting ATPase [Marinomonas mediterranea
           MMB-1]
          Length = 355

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 8/73 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLLS 56
           G FI   G  G GK+T + ++          L  K   V   +EP     A   ++  L 
Sbjct: 30  GEFIVLVGPSGCGKSTLLRMVAGLETITQGDLLIKGKRV-NEKEPADRDIAMVFQNYALY 88

Query: 57  CGVDEFGAEAEAI 69
             +  +G  A  +
Sbjct: 89  PHMTVYGNMAYGL 101


>gi|315167647|gb|EFU11664.1| conserved hypothetical protein [Enterococcus faecalis TX1341]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|315162767|gb|EFU06784.1| conserved hypothetical protein [Enterococcus faecalis TX0645]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|301629888|ref|XP_002944064.1| PREDICTED: ATP-binding transport protein smoK-like [Xenopus
          (Silurana) tropicalis]
          Length = 347

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI F G  G GK+T + L+ 
Sbjct: 28 QGEFIVFVGPSGCGKSTLLRLIA 50


>gi|294675464|ref|YP_003576080.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella
           ruminicola 23]
 gi|294473939|gb|ADE83328.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella
           ruminicola 23]
          Length = 204

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 30/194 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G+GK+T   LL +      ++             +  R +        +    
Sbjct: 3   IAVAGNIGSGKSTLTKLLAKH---YGWEPRFEAVEHNPYLEDYYRDI------HRWSFNM 53

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHL-------FLD 118
           E         D +             ++ DR +    Y +        +L       +++
Sbjct: 54  EVYFLKERFRDLIT-----IAQADHTIIQDRTIYEGVYVFMENNRDMGNLSERDYETYME 108

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
             +++     +PD  I L   V   +  +Q R         DY +   +   +   + + 
Sbjct: 109 LFEQMMTVVKVPDLMIYLRASVPHLVSNIQKRGR-------DYEQSIQLEYLQNLNRRYD 161

Query: 179 DIARN-QPDRCHIV 191
           D  +N  P R   +
Sbjct: 162 DFIKNKYPGRVITI 175


>gi|283782239|ref|YP_003372994.1| signal recognition particle-docking protein FtsY [Pirellula staleyi
           DSM 6068]
 gi|283440692|gb|ADB19134.1| signal recognition particle-docking protein FtsY [Pirellula staleyi
           DSM 6068]
          Length = 343

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ G+GKTT I+ L  + +++   V +
Sbjct: 145 GVNGSGKTTSIAKLTSYFRQQGKSVVL 171


>gi|282933462|ref|ZP_06338838.1| excinuclease ABC, A subunit [Lactobacillus jensenii 208-1]
 gi|281302393|gb|EFA94619.1| excinuclease ABC, A subunit [Lactobacillus jensenii 208-1]
          Length = 946

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F+   G+ G+GK+T +       L + L   +       +  G    E    +
Sbjct: 628 GKFVVVTGVSGSGKSTLVNTILKRALAQKLNHNSAKPGKFEKITGYKDIEKIIDI 682


>gi|218264139|ref|ZP_03478031.1| hypothetical protein PRABACTJOHN_03721 [Parabacteroides johnsonii
          DSM 18315]
 gi|218222257|gb|EEC94907.1| hypothetical protein PRABACTJOHN_03721 [Parabacteroides johnsonii
          DSM 18315]
          Length = 218

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 2/83 (2%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
          G GKTT  +L   +L  K   V               R        +        ++  +
Sbjct: 14 GVGKTTLCALFASYLAEKGCPVIAIDADLQASLYRH-RQREKDVAPEAQIPWNVELLDTS 72

Query: 74 ARLDHVENVIRPALMEGKILLCD 96
           R  H+E V+        I+L D
Sbjct: 73 DRG-HLERVMGKLKSVPGIVLID 94


>gi|170704074|ref|ZP_02894706.1| type II secretion system protein E [Burkholderia ambifaria
           IOP40-10]
 gi|170131016|gb|EDS99711.1| type II secretion system protein E [Burkholderia ambifaria
           IOP40-10]
          Length = 402

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I   G  G+GKTT ++ L + ++     V
Sbjct: 181 IVISGGTGSGKTTLLNALSQHIEEHERIV 209


>gi|170761530|ref|YP_001786446.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           A3 str. Loch Maree]
 gi|169408519|gb|ACA56930.1| ABC transport ATP-binding/permease protein [Clostridium botulinum
           A3 str. Loch Maree]
          Length = 573

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           M  G   +  G  G+GK+T + L+ RF   +   V + +E
Sbjct: 356 MKEGTLTALVGPSGSGKSTVLKLVARFYDPQQGKVLLGKE 395


>gi|158339559|ref|YP_001520948.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158309800|gb|ABW31416.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1215

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62
             ++  GI G GKTT    L + LQ K   +         P       +  LLS   D  
Sbjct: 134 RLVALLGIGGIGKTTLAVKLAQQLQSKFDQIVWRSLRNAPPLETLLTELVPLLSGQTDSR 193

Query: 63  GAEAEAIVFAAAR-----LDHVENVIRP 85
              +  +    AR     LD++E +++P
Sbjct: 194 PELSALLPTLRARKCLLVLDNLEAILQP 221


>gi|149194174|ref|ZP_01871272.1| Cell division transporter substrate-binding protein FtsY
           [Caminibacter mediatlanticus TB-2]
 gi|149136127|gb|EDM24605.1| Cell division transporter substrate-binding protein FtsY
           [Caminibacter mediatlanticus TB-2]
          Length = 290

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I+ L    +++   V +
Sbjct: 91  GVNGAGKTTTIAKLAHKFKKEGKSVIL 117


>gi|154337230|ref|XP_001564848.1| adenylate kinase [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061886|emb|CAM38925.1| putative adenylate kinase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 276

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 71/235 (30%), Gaps = 65/235 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G   +GK T    +  + +R        ++P    + +  R  +                
Sbjct: 66  GPPASGKGTQAGYICSYYKR-----TTGKKPVHVSSGDLLRAEV---------------- 104

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSL-------- 120
              A   H+  +    +  G+++      DS          ++   +    L        
Sbjct: 105 ---AEGTHLGKIAEDYMQRGELV-----PDSLIISIIRGRLTKEDAVMNGWLLDGFPRNR 156

Query: 121 -QEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSL----------------RESACLDY 161
            Q I++    + P   ++LD P ++  +RV+ R +                  ++A L+ 
Sbjct: 157 SQAIALDAAGLTPRILMVLDTPDEVLFERVEGRRTDPLTGTIYHLKYNPPPEDDTALLER 216

Query: 162 FERKDVMIHEK---RRQIFL----DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            + +D    E    R   +     D+        + VD+      +  +I   + 
Sbjct: 217 LQHRDDDTREVLGPRLDGYHSMVNDLLDYYGSIMYHVDANRPMSVITKDITEYLQ 271


>gi|116075748|ref|ZP_01473007.1| Adenylate kinase, subfamily protein [Synechococcus sp. RS9916]
 gi|116067063|gb|EAU72818.1| Adenylate kinase, subfamily protein [Synechococcus sp. RS9916]
          Length = 185

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 40/215 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   L   F G  GAGK T  + L     +       T   G    AE A    L     
Sbjct: 1   MKKRLL--FLGPPGAGKGTQAARLCE---QHGMKHLST---GDLLRAEVAAGTDLGKEAK 52

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 E  + + A +  +      AL +G  LL            G   +      ++L
Sbjct: 53  AVMNRGE--LVSDALVLAIVKGQLGALGDGGWLL-----------DGFPRNVAQA--EAL 97

Query: 121 QEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           + +  +   P +  ++L+L   + ++R+ +R            + +DV+ H    +++ D
Sbjct: 98  EPLLTEIGQPLEAVVLLELDDAVLMERMLSRGRED--------DNEDVIRHR--LEVYRD 147

Query: 180 ----IARNQPDRCHIV--DSAHSFQSVATNILNIV 208
               +  +   +  ++  ++  + +++   I   +
Sbjct: 148 KTAPLIDHYRQKGQLISVEAQGNIEAITDRIQQAL 182


>gi|37680372|ref|NP_934981.1| hypothetical protein VV2188 [Vibrio vulnificus YJ016]
 gi|37199119|dbj|BAC94952.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
          Length = 177

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 17/101 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + F G  GAGKT+ I     +L    Y            A E  R V+ +    +  A  
Sbjct: 5   VVFTGGPGAGKTSVI----EYLNNLGYP----------SAHEVGRKVIQAQMQAQGSALP 50

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAY 105
                 A R   V   I+     G  +    DR +   Y Y
Sbjct: 51  WLDK-LAFRDQMVAEEIKNYDDFGHAVTTFYDRSIIDCYGY 90


>gi|23502089|ref|NP_698216.1| adenylate kinase [Brucella suis 1330]
 gi|148558939|ref|YP_001259132.1| adenylate kinase [Brucella ovis ATCC 25840]
 gi|161619168|ref|YP_001593055.1| adenylate kinase [Brucella canis ATCC 23365]
 gi|225627684|ref|ZP_03785721.1| adenylate kinase [Brucella ceti str. Cudo]
 gi|254701953|ref|ZP_05163781.1| adenylate kinase [Brucella suis bv. 5 str. 513]
 gi|254704497|ref|ZP_05166325.1| adenylate kinase [Brucella suis bv. 3 str. 686]
 gi|254706607|ref|ZP_05168435.1| adenylate kinase [Brucella pinnipedialis M163/99/10]
 gi|254710283|ref|ZP_05172094.1| adenylate kinase [Brucella pinnipedialis B2/94]
 gi|254714280|ref|ZP_05176091.1| adenylate kinase [Brucella ceti M644/93/1]
 gi|254717717|ref|ZP_05179528.1| adenylate kinase [Brucella ceti M13/05/1]
 gi|254719270|ref|ZP_05181081.1| adenylate kinase [Brucella sp. 83/13]
 gi|256031777|ref|ZP_05445391.1| adenylate kinase [Brucella pinnipedialis M292/94/1]
 gi|256159947|ref|ZP_05457665.1| adenylate kinase [Brucella ceti M490/95/1]
 gi|256255178|ref|ZP_05460714.1| adenylate kinase [Brucella ceti B1/94]
 gi|256369636|ref|YP_003107146.1| adenylate kinase [Brucella microti CCM 4915]
 gi|260168911|ref|ZP_05755722.1| adenylate kinase [Brucella sp. F5/99]
 gi|260566259|ref|ZP_05836729.1| adenylate kinase [Brucella suis bv. 4 str. 40]
 gi|261219560|ref|ZP_05933841.1| adenylate kinase [Brucella ceti M13/05/1]
 gi|261222374|ref|ZP_05936655.1| adenylate kinase [Brucella ceti B1/94]
 gi|261314066|ref|ZP_05953263.1| adenylate kinase [Brucella pinnipedialis M163/99/10]
 gi|261317846|ref|ZP_05957043.1| adenylate kinase [Brucella pinnipedialis B2/94]
 gi|261322055|ref|ZP_05961252.1| adenylate kinase [Brucella ceti M644/93/1]
 gi|261752521|ref|ZP_05996230.1| adenylate kinase [Brucella suis bv. 5 str. 513]
 gi|261755180|ref|ZP_05998889.1| adenylate kinase [Brucella suis bv. 3 str. 686]
 gi|261758404|ref|ZP_06002113.1| adenylate kinase [Brucella sp. F5/99]
 gi|265984270|ref|ZP_06097005.1| adenylate kinase [Brucella sp. 83/13]
 gi|265988875|ref|ZP_06101432.1| adenylate kinase [Brucella pinnipedialis M292/94/1]
 gi|265998339|ref|ZP_06110896.1| adenylate kinase [Brucella ceti M490/95/1]
 gi|306838022|ref|ZP_07470880.1| adenylate kinase [Brucella sp. NF 2653]
 gi|306844116|ref|ZP_07476710.1| adenylate kinase [Brucella sp. BO1]
 gi|29427500|sp|Q8G092|KAD_BRUSU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|166980300|sp|A5VQY5|KAD_BRUO2 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|189046006|sp|A9M5M9|KAD_BRUC2 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|23348048|gb|AAN30131.1| adenylate kinase [Brucella suis 1330]
 gi|148370196|gb|ABQ60175.1| adenylate kinase [Brucella ovis ATCC 25840]
 gi|161335979|gb|ABX62284.1| adenylate kinase [Brucella canis ATCC 23365]
 gi|225617689|gb|EEH14734.1| adenylate kinase [Brucella ceti str. Cudo]
 gi|255999798|gb|ACU48197.1| adenylate kinase [Brucella microti CCM 4915]
 gi|260155777|gb|EEW90857.1| adenylate kinase [Brucella suis bv. 4 str. 40]
 gi|260920958|gb|EEX87611.1| adenylate kinase [Brucella ceti B1/94]
 gi|260924649|gb|EEX91217.1| adenylate kinase [Brucella ceti M13/05/1]
 gi|261294745|gb|EEX98241.1| adenylate kinase [Brucella ceti M644/93/1]
 gi|261297069|gb|EEY00566.1| adenylate kinase [Brucella pinnipedialis B2/94]
 gi|261303092|gb|EEY06589.1| adenylate kinase [Brucella pinnipedialis M163/99/10]
 gi|261738388|gb|EEY26384.1| adenylate kinase [Brucella sp. F5/99]
 gi|261742274|gb|EEY30200.1| adenylate kinase [Brucella suis bv. 5 str. 513]
 gi|261744933|gb|EEY32859.1| adenylate kinase [Brucella suis bv. 3 str. 686]
 gi|262552807|gb|EEZ08797.1| adenylate kinase [Brucella ceti M490/95/1]
 gi|264661072|gb|EEZ31333.1| adenylate kinase [Brucella pinnipedialis M292/94/1]
 gi|264662862|gb|EEZ33123.1| adenylate kinase [Brucella sp. 83/13]
 gi|306275559|gb|EFM57291.1| adenylate kinase [Brucella sp. BO1]
 gi|306406946|gb|EFM63167.1| adenylate kinase [Brucella sp. NF 2653]
          Length = 194

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 53/218 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   LL    ++       T         +  R  +      E G  A+A++
Sbjct: 7   GPPGAGKGTQAGLLT---KKHGIPQLST--------GDMLRAAV--AQQSEIGKRAKAVM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFLDSLQEISV 125
                   V + I         ++ +R +D+      +   G   +       +L ++  
Sbjct: 54  ---DAGQLVSDEIVNQ------IVSER-IDAPDCANGFILDGYPRTVPQA--QALSQMLS 101

Query: 126 Q-EVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEKR--- 173
              +  D  I L +  +  +KR+++R          +R     + F ++ V   EK    
Sbjct: 102 GKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPL 161

Query: 174 ---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                   ++         +++     + V   I  I+
Sbjct: 162 SSYYAGTGEL--------RVINGMAPVEEVTAEIERIL 191


>gi|115358174|ref|YP_775312.1| type II secretion system protein E [Burkholderia ambifaria AMMD]
 gi|115283462|gb|ABI88978.1| type II secretion system protein E [Burkholderia ambifaria AMMD]
          Length = 472

 Score = 35.8 bits (82), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 15/29 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           I   G  G+GKTT ++ L + ++     V
Sbjct: 251 IVISGGTGSGKTTLLNALSQHIEEHERIV 279


>gi|327301853|ref|XP_003235619.1| guanylate kinase [Trichophyton rubrum CBS 118892]
 gi|326462971|gb|EGD88424.1| guanylate kinase [Trichophyton rubrum CBS 118892]
          Length = 199

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 52/169 (30%), Gaps = 25/169 (14%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +   G  G GK+T +  L   +  +  + V H TR P   P  E  R    +        
Sbjct: 12  VVISGPSGTGKSTLLKRLFAEYPDKFGFSVSHTTRGP--RPGEEDGREYNFTTK------ 63

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA +            I  A   G       +  S  A +   D  +   LD   E  
Sbjct: 64  --EAFLKLVDE----GGFIEHAQFGGNH-----YGTSIAAVKRVADQGRICVLDIEMEGV 112

Query: 125 VQEVMPDCT--IILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
            Q    D     +   P   +   +R++ R +  E +      +  V +
Sbjct: 113 KQVKRTDLNARFLFLAPPSIEELERRLRGRGTESEDSLQKRLAQARVEL 161


>gi|319946357|ref|ZP_08020595.1| excision endonuclease subunit UvrA [Streptococcus australis ATCC
           700641]
 gi|319747510|gb|EFV99765.1| excision endonuclease subunit UvrA [Streptococcus australis ATCC
           700641]
          Length = 941

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRK 31
           G FI+  G+ G+GK+T ++ +LK+ L +K
Sbjct: 634 GKFIAVTGVSGSGKSTLVNSILKKTLAQK 662


>gi|315926793|gb|EFV06167.1| Sensor protein KdpD [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 607

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 44/193 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTR-EPGGTPAAEAA--------------RHVLLSCG 58
           G+GKT  +    R L+    DV +   EP   P   A               ++++L   
Sbjct: 37  GSGKTYAMLSEARTLRDNGIDVVLGYIEPHDRPETMALTQGFESIANLEIPYKNIVLKEF 96

Query: 59  VDEFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGE 108
             +   + +  +     L H              I   L  G  +       ++   Q  
Sbjct: 97  DLDATLKRKPALVLVDELAHTNAKGLRNEKRFQDIEELLKAGIDV------YTTLNIQHL 150

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTI-------ILDLPVDIGLKRVQNRYSLRESACLDY 161
              +    + ++ +I V+E +PD          ++D+  +  LKR+Q+    +E      
Sbjct: 151 ESLND--LVANISKIEVKERIPDRIFDEADQVELVDIEPNKLLKRMQDGKIYKEKQAKLA 208

Query: 162 FERKDVMIHEKRR 174
            E        + R
Sbjct: 209 LEN----FFRQER 217


>gi|313247812|ref|YP_004032974.1| hypothetical protein pTW9_p38 [Enterococcus faecalis]
 gi|312836979|dbj|BAJ34865.1| hypothetical protein [Enterococcus faecalis]
          Length = 747

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 238 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 277


>gi|283463699|gb|ADB22537.1| NodQ [Rhizobium sp. LPU83]
          Length = 633

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L R L  +    +                 LL       G   + 
Sbjct: 465 FTGLSGSGKSTIANELDRILHAQGKHTY-----------------LLDGDNVRHGLNRDL 507

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V +     G I+L      S  +   +        ++  + I  
Sbjct: 508 GFTEEDRVENIRRVAEVAKLMADAGLIVLV-----SFISPFRDERRMAREMMEEGEFIE- 561

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P++   +R
Sbjct: 562 --------IFVDTPIEECARR 574


>gi|307292320|ref|ZP_07572180.1| hypothetical protein HMPREF9509_02616 [Enterococcus faecalis
           TX0411]
 gi|306496612|gb|EFM66169.1| hypothetical protein HMPREF9509_02616 [Enterococcus faecalis
           TX0411]
 gi|323481869|gb|ADX81305.1| Type IV secretion-system coupling protein TrwB_AAD DNA-binding
           domain protein [Enterococcus faecalis 62]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|299116617|emb|CBN76243.1| dynein heavy chain dynein heavy chain [Ectocarpus siliculosus]
          Length = 3324

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 26/121 (21%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
            G  I   G  G GK+T  S+L+  + +    V      P   P     R  LL     + 
Sbjct: 1399 GCVIV--GPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMP-----RQRLLGHMDLDT 1451

Query: 63   GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                + ++ AAAR      V++        L+CD                   +++SL  
Sbjct: 1452 REWFDGVLTAAAR-----KVVKEPPEVKSWLVCD-------------GDVDPEWIESLNS 1493

Query: 123  I 123
            +
Sbjct: 1494 V 1494


>gi|284161973|ref|YP_003400596.1| hypothetical protein Arcpr_0860 [Archaeoglobus profundus DSM
          5631]
 gi|284011970|gb|ADB57923.1| hypothetical protein Arcpr_0860 [Archaeoglobus profundus DSM
          5631]
          Length = 413

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 9/44 (20%)

Query: 2  NSGLFISFE---------GIEGAGKTTHISLLKRFLQRKNYDVH 36
            G F++           G+ GAGKTT    LK     +   V 
Sbjct: 36 KKGKFVTVSSKVKHRAIVGVTGAGKTTLAQTLKEVDYARGRKVV 79


>gi|260774404|ref|ZP_05883318.1| ABC transporter, ATP-binding protein [Vibrio metschnikovii CIP
           69.14]
 gi|260610531|gb|EEX35736.1| ABC transporter, ATP-binding protein [Vibrio metschnikovii CIP
           69.14]
          Length = 354

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 36/179 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------- 53
           +  G  ++  G  G GKTT + L+   L++             T  +   R +       
Sbjct: 29  IKKGTLVTLLGPSGCGKTTVLRLVAG-LEKPTSGQIFIDGEDVTERSIQQRDICMVFQSY 87

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGER 109
            L   +  +   A  +         +   +  AL   KI+    + DR++D     Q +R
Sbjct: 88  ALFPHMSLYDNVAYGLKMLKLPSSEIRQRVEEAL---KIVGLEAMGDRYVDQISGGQQQR 144

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRESACLDYFE 163
            +     +          + P   ++ D     L  ++   R   R ++RE      F+
Sbjct: 145 VALARALV----------LKP-KVLLFDEPLSNLDANL---RRSMRETIRELQQ--RFD 187


>gi|257469002|ref|ZP_05633096.1| Signal recognition particle, subunit FFH/SRP54 [Fusobacterium
           ulcerans ATCC 49185]
          Length = 446

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT  + L  +L+++   V + 
Sbjct: 107 GLQGAGKTTFAAKLANYLKKQGESVLMV 134


>gi|256852590|ref|ZP_05557965.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256712137|gb|EEU27170.1| conserved hypothetical protein [Enterococcus faecalis T8]
          Length = 747

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 238 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 277


>gi|255976397|ref|ZP_05426983.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|255969269|gb|EET99891.1| conserved hypothetical protein [Enterococcus faecalis T2]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|256827660|ref|YP_003151619.1| ABC-type cobalt transporter ATPase [Cryptobacterium curtum DSM
          15641]
 gi|256583803|gb|ACU94937.1| ABC-type cobalt transport system, ATPase component
          [Cryptobacterium curtum DSM 15641]
          Length = 283

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCG 58
           G F++  G  G+GK+T    +   L   +  V +    T +P  T    +   ++    
Sbjct: 32 QGEFVAILGGNGSGKSTLAKHIDALLTPDSGRVLIDSNDTADPSCTYLIRSIAGMVFQNP 91

Query: 59 VDEF 62
           D+ 
Sbjct: 92 DDQI 95


>gi|227833893|ref|YP_002835600.1| iron ABC transport system, ATP-binding protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184896|ref|ZP_06044317.1| iron ABC transport system, ATP-binding protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454909|gb|ACP33662.1| iron ABC transport system, ATP-binding protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 253

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI- 69
           G   +GKTT I  L    + +   V   R  G  P  +  R ++    V +      A+ 
Sbjct: 38  GPNASGKTTTIKALAGVHRARGGTVDF-RVDGQAPRGQRRRQLI--GYVPQGLPHTAALR 94

Query: 70  ----VFAAARLDHVENVI 83
               V  AAR +  E+ I
Sbjct: 95  AFEAVLIAARREACEDPI 112


>gi|223039867|ref|ZP_03610151.1| adenylate kinase (ATP-AMP transphosphorylase) [Campylobacter rectus
           RM3267]
 gi|222878876|gb|EEF13973.1| adenylate kinase (ATP-AMP transphosphorylase) [Campylobacter rectus
           RM3267]
          Length = 188

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 37/218 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56
           M     I   G  G+GKTT  SL+ +   +  +    D+       G+   +     +  
Sbjct: 1   MKKLFLII--GAPGSGKTTDASLIAQEDAKFAHFSTGDLLRAEVASGSELGKLIDGFISK 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +        AIV A          I+ +      ++ D +  S      E+ +     
Sbjct: 59  GNLVPLDVVVNAIVSA----------IKSSNKSN--VIIDGYPRS-----VEQMTELDKV 101

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKR 173
           L +  EI+++       I +D+   +  +RV  R    +       +   +  +   E  
Sbjct: 102 LAAQSEIALKG-----VIEVDVSEAVARERVLGRARGADDNNEVFNNRM-KVYLEPIEAI 155

Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           R+ +        +  +IV+   + + +  +I  ++  L
Sbjct: 156 RKFY-----KSKNLLYIVNGERAIEPIVADIKQLINAL 188


>gi|197103294|ref|YP_002128672.1| ABC transport system, ATPase component [Phenylobacterium zucineum
           HLK1]
 gi|196480570|gb|ACG80097.1| ABC transport system, ATPase component [Phenylobacterium zucineum
           HLK1]
          Length = 568

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 11  GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA--E 67
           G +GAGKTT + +L   L+        +  +    P+   AR   +S G   +      E
Sbjct: 39  GPDGAGKTTLLQMLAAILRPSAGTCQVLGVDVRHRPSLVQARVGFMSQGFSLYDRLTVAE 98

Query: 68  AIVFAAARLDHVENVIRPALM 88
            + FAAA    + +V +PAL 
Sbjct: 99  NLAFAAA----IRDVPQPALA 115


>gi|196038921|ref|ZP_03106228.1| ABC transporter, ATP-binding protein [Bacillus cereus NVH0597-99]
 gi|196030066|gb|EDX68666.1| ABC transporter, ATP-binding protein [Bacillus cereus NVH0597-99]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|196033454|ref|ZP_03100866.1| ABC transporter, ATP-binding protein [Bacillus cereus W]
 gi|228945389|ref|ZP_04107744.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar monterrey BGSC 4AJ1]
 gi|195993888|gb|EDX57844.1| ABC transporter, ATP-binding protein [Bacillus cereus W]
 gi|228814361|gb|EEM60627.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar monterrey BGSC 4AJ1]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|167762468|ref|ZP_02434595.1| hypothetical protein BACSTE_00823 [Bacteroides stercoris ATCC
          43183]
 gi|167699574|gb|EDS16153.1| hypothetical protein BACSTE_00823 [Bacteroides stercoris ATCC
          43183]
          Length = 460

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 RKGEFVTILGPSGCGKTTLLRLIA 54


>gi|167633436|ref|ZP_02391761.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          A0442]
 gi|170686261|ref|ZP_02877483.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          A0465]
 gi|196045178|ref|ZP_03112411.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB108]
 gi|218902902|ref|YP_002450736.1| ABC transporter, ATP-binding protein [Bacillus cereus AH820]
 gi|225863646|ref|YP_002749024.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB102]
 gi|228914364|ref|ZP_04077979.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar pulsiensis BGSC 4CC1]
 gi|228933070|ref|ZP_04095933.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar andalousiensis BGSC 4AW1]
 gi|229183981|ref|ZP_04311196.1| ABC transporter ATP-binding protein [Bacillus cereus BGSC 6E1]
 gi|254683288|ref|ZP_05147149.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          CNEVA-9066]
 gi|254723871|ref|ZP_05185657.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          A1055]
 gi|254741051|ref|ZP_05198739.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          Kruger B]
 gi|301053325|ref|YP_003791536.1| ABC transporter ATP-binding protein [Bacillus anthracis CI]
 gi|167531474|gb|EDR94152.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          A0442]
 gi|170669958|gb|EDT20699.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          A0465]
 gi|196024180|gb|EDX62854.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB108]
 gi|218538799|gb|ACK91197.1| ABC transporter, ATP-binding protein [Bacillus cereus AH820]
 gi|225786126|gb|ACO26343.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB102]
 gi|228599506|gb|EEK57111.1| ABC transporter ATP-binding protein [Bacillus cereus BGSC 6E1]
 gi|228826671|gb|EEM72442.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar andalousiensis BGSC 4AW1]
 gi|228845358|gb|EEM90394.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar pulsiensis BGSC 4CC1]
 gi|300375494|gb|ADK04398.1| ABC transporter, ATP-binding protein [Bacillus cereus biovar
          anthracis str. CI]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|146310277|ref|YP_001175351.1| thiamine transporter ATP-binding subunit [Enterobacter sp. 638]
 gi|145317153|gb|ABP59300.1| ABC transporter, ATPase subunit, ThiQ subfamily [Enterobacter sp.
          638]
          Length = 235

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
            G  I+  G  GAGK+T ++L+  FL   +        +   TP ++    +L     
Sbjct: 23 QQGEMIAILGPSGAGKSTLLNLIAGFLPPARGEMTINGEDHTHTPPSQRPVSMLFQENN 81


>gi|49480920|ref|YP_035903.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar konkukian str. 97-27]
 gi|49332476|gb|AAT63122.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis
          serovar konkukian str. 97-27]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|46907936|ref|YP_014325.1| deoxynucleoside kinase family protein [Listeria monocytogenes str.
           4b F2365]
 gi|47094250|ref|ZP_00231960.1| deoxynucleoside kinase family protein [Listeria monocytogenes str.
           4b H7858]
 gi|226224308|ref|YP_002758415.1| deoxyguanosine kinase/deoxyadenosine kinase(I) subunit [Listeria
           monocytogenes Clip81459]
 gi|254826047|ref|ZP_05231048.1| deoxynucleoside kinase [Listeria monocytogenes FSL J1-194]
 gi|254853621|ref|ZP_05242969.1| deoxynucleoside kinase [Listeria monocytogenes FSL R2-503]
 gi|254932849|ref|ZP_05266208.1| deoxynucleoside kinase [Listeria monocytogenes HPB2262]
 gi|255520200|ref|ZP_05387437.1| deoxyguanosine kinase/deoxyadenosine kinase(I) subunit [Listeria
           monocytogenes FSL J1-175]
 gi|300764678|ref|ZP_07074669.1| deoxynucleoside kinase [Listeria monocytogenes FSL N1-017]
 gi|46881205|gb|AAT04502.1| deoxynucleoside kinase family protein [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47017378|gb|EAL08201.1| deoxynucleoside kinase family protein [Listeria monocytogenes str.
           4b H7858]
 gi|225876770|emb|CAS05479.1| Putative deoxyguanosine kinase/deoxyadenosine kinase(I) subunit
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258606996|gb|EEW19604.1| deoxynucleoside kinase [Listeria monocytogenes FSL R2-503]
 gi|293584403|gb|EFF96435.1| deoxynucleoside kinase [Listeria monocytogenes HPB2262]
 gi|293595287|gb|EFG03048.1| deoxynucleoside kinase [Listeria monocytogenes FSL J1-194]
 gi|300514564|gb|EFK41620.1| deoxynucleoside kinase [Listeria monocytogenes FSL N1-017]
 gi|328473950|gb|EGF44766.1| deoxynucleoside kinase family protein [Listeria monocytogenes 220]
          Length = 214

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 82/232 (35%), Gaps = 46/232 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62
             I   G+ GAGK+++  L+   L                   +A    +    + E   
Sbjct: 7   KVIVLAGMIGAGKSSYTELIANEL-----------------GTKAFYESIKDNRILEMFY 49

Query: 63  -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-----SQH 114
              +  A       L+     I+ AL +   +L DR  + D+ +      +         
Sbjct: 50  EDPKRWAFALQIYFLNTRFRSIKAALTDQNNVL-DRSIYEDALFTQINFEEGNISEPEMD 108

Query: 115 LFLDSL----QEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-----ACLDYFER 164
            +LD L    +E++ + +  PD  I L   +D  L R+  R    E        LDY++ 
Sbjct: 109 TYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNPGLLDYYKH 168

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHI--VDSAHSFQSVATNILNIVWELVQK 214
               +H +    F    +++    +I  +D        A  ++ ++ E +++
Sbjct: 169 ----LHSRYDSWFESYDKSETLVINIDEIDINQPND--ADYVMQLIHEKLKR 214


>gi|30261792|ref|NP_844169.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          Ames]
 gi|47527026|ref|YP_018375.1| ABC transporter ATP-binding protein [Bacillus anthracis str.
          'Ames Ancestor']
 gi|49184624|ref|YP_027876.1| ABC transporter ATP-binding protein [Bacillus anthracis str.
          Sterne]
 gi|65319069|ref|ZP_00392028.1| COG3839: ABC-type sugar transport systems, ATPase components
          [Bacillus anthracis str. A2012]
 gi|227815440|ref|YP_002815449.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. CDC
          684]
 gi|254734642|ref|ZP_05192354.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          Western North America USA6153]
 gi|254755294|ref|ZP_05207328.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          Vollum]
 gi|254759831|ref|ZP_05211855.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          Australia 94]
 gi|30256020|gb|AAP25655.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          Ames]
 gi|47502174|gb|AAT30850.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          'Ames Ancestor']
 gi|49178551|gb|AAT53927.1| ABC transporter, ATP-binding protein [Bacillus anthracis str.
          Sterne]
 gi|227003548|gb|ACP13291.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. CDC
          684]
          Length = 318

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|330836199|ref|YP_004410840.1| Fe(3+)-transporting ATPase [Spirochaeta coccoides DSM 17374]
 gi|329748102|gb|AEC01458.1| Fe(3+)-transporting ATPase [Spirochaeta coccoides DSM 17374]
          Length = 228

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 4  GLFISFEGIEGAGKTTHISL-LKRFLQRKNYDVHVTREP 41
          G F+   G  G+GKTT + L L   L          + P
Sbjct: 34 GQFVCISGRNGSGKTTLMRLFLGELLPSNGTVAIFGQNP 72


>gi|324329092|gb|ADY24352.1| peptide ABC transporter ATP-binding protein [Bacillus
          thuringiensis serovar finitimus YBT-020]
          Length = 242

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G FI+  G  G+GK+T ++LL
Sbjct: 30 KGEFIAIMGPSGSGKSTLLNLL 51


>gi|323450822|gb|EGB06701.1| hypothetical protein AURANDRAFT_28694 [Aureococcus anophagefferens]
          Length = 670

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
           G  G GKTT + +L   L+    DV ++R
Sbjct: 107 GANGGGKTTQLKVLAGELEPAGGDVVLSR 135


>gi|315163523|gb|EFU07540.1| conserved hypothetical protein [Enterococcus faecalis TX1302]
          Length = 752

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|313897798|ref|ZP_07831339.1| ABC transporter, ATP-binding protein [Clostridium sp. HGF2]
 gi|312957333|gb|EFR38960.1| ABC transporter, ATP-binding protein [Clostridium sp. HGF2]
          Length = 250

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FIS  G  G GK+T + ++    +R   ++  
Sbjct: 36 FISIIGPSGCGKSTLLRIVSELQERDGGEIVF 67


>gi|295703041|ref|YP_003596116.1| putative ABC transporter ATP-binding/permease [Bacillus megaterium
           DSM 319]
 gi|294800700|gb|ADF37766.1| putative ABC transporter, ATP-binding/permease protein [Bacillus
           megaterium DSM 319]
          Length = 594

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 39/116 (33%), Gaps = 30/116 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRF----------------------LQRKNYDVHVTR 39
             G  ++  G  G+GKTT I+LL RF                      L+++   V    
Sbjct: 380 KKGEMVALVGPTGSGKTTIINLLTRFYDISNGDIKIDGRSISDYNIHDLRKRIGIVLQDT 439

Query: 40  EPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                  A+  R   L    +E          +AA++ +  + I+    +   ++ 
Sbjct: 440 YLFSGTIADNIRFGRLDASDEEVK--------SAAKMANAHSFIKHLPQQYNTVIS 487


>gi|265991964|ref|ZP_06104521.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263003030|gb|EEZ15323.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis bv. 1 str. Rev.1]
          Length = 463

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 267 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 322

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 323 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 368


>gi|257088738|ref|ZP_05583099.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|256997550|gb|EEU84070.1| conserved hypothetical protein [Enterococcus faecalis CH188]
          Length = 747

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 238 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 277


>gi|256963336|ref|ZP_05567507.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256953832|gb|EEU70464.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
          Length = 504

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 16 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 55


>gi|256544686|ref|ZP_05472058.1| general secretory pathway protein E [Anaerococcus vaginalis ATCC
           51170]
 gi|256399575|gb|EEU13180.1| general secretory pathway protein E [Anaerococcus vaginalis ATCC
           51170]
          Length = 394

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
            SG+ I F G  G+GK+T +  L   L  +  ++     P
Sbjct: 143 KSGMII-FSGPTGSGKSTSLYSLLNKLNDEKRNIISIENP 181


>gi|237749681|ref|ZP_04580161.1| signal recognition particle protein [Helicobacter bilis ATCC 43879]
 gi|229374719|gb|EEO25110.1| signal recognition particle protein [Helicobacter bilis ATCC 43879]
          Length = 290

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           G+ GAGKTT I+ L +  +  N  V +    G T  A A   + L   
Sbjct: 91  GVNGAGKTTTIAKLAKRFKDNNKKVIL--GAGDTFRAAAIEQLQLWSE 136


>gi|228910640|ref|ZP_04074452.1| ABC transporter-related protein [Bacillus thuringiensis IBL 200]
 gi|228849055|gb|EEM93897.1| ABC transporter-related protein [Bacillus thuringiensis IBL 200]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|229088551|ref|ZP_04220211.1| ABC transporter-related protein [Bacillus cereus Rock3-44]
 gi|228694757|gb|EEL48073.1| ABC transporter-related protein [Bacillus cereus Rock3-44]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G FISF G  G GKTT +S++   LQ
Sbjct: 33 GEFISFLGPSGCGKTTLLSIIAGLLQ 58


>gi|227501806|ref|ZP_03931855.1| dephospho-CoA kinase [Corynebacterium accolens ATCC 49725]
 gi|227077831|gb|EEI15794.1| dephospho-CoA kinase [Corynebacterium accolens ATCC 49725]
          Length = 200

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 69/220 (31%), Gaps = 39/220 (17%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------VTREPGGTPAAEAARH----V 53
             I   G  G+GK+T   L  +    + + V           +PG    AE A      +
Sbjct: 2   KLIGLTGGIGSGKSTVAKLCAQ----RGWRVVDADRIARDIVKPGQPALAELAEKFGQDI 57

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           L   G  +    A          + + ++  P + +          ++   +   R+   
Sbjct: 58  LQEDGSLDRKELARRAFVDKEHTELLNSITHPRIQK----------ETQRQFAAAREEGV 107

Query: 114 HLFLDSLQEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
              +  +  +    +  D    I++D+  +  ++R+     L E+        +      
Sbjct: 108 DFTVYDMPLLVDNGLDGDMDFVIVVDVDPEERVRRLVEFRGLDEADARKRINAQISDD-- 165

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                   +A       H++D+  + + +A     +  E+
Sbjct: 166 ------KRLAAAS----HVIDNNGTQEQLAERAAAVCDEI 195


>gi|255574019|ref|XP_002527927.1| abc transporter, putative [Ricinus communis]
 gi|223532702|gb|EEF34484.1| abc transporter, putative [Ricinus communis]
          Length = 684

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I+  G+ G+GK+T ++LL R  +  N  + +   P G    +  R  +   G + 
Sbjct: 465 HPGEVIAIVGLSGSGKSTLVNLLLRLYEPTNGQILIDGFPLGELDIKWLRERIGYVGQEP 524


>gi|182420436|ref|ZP_02951655.1| guanylate kinase [Clostridium butyricum 5521]
 gi|237668339|ref|ZP_04528323.1| guanylate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182375722|gb|EDT73322.1| guanylate kinase [Clostridium butyricum 5521]
 gi|237656687|gb|EEP54243.1| guanylate kinase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 212

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 50/172 (29%), Gaps = 31/172 (18%)

Query: 1   MN---SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLS 56
           MN    GL I   G  GAGK T               V   TR P      +   +  +S
Sbjct: 1   MNDKGRGLLIVISGPSGAGKGTICKSFLERNSEVAISVSATTRSPRNGEV-DGINYYFMS 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               +   EA   +  A   D+     ++ +   L  GK ++ +         QG     
Sbjct: 60  KEQFKEKIEANDFLEYAEVYDNFYGTPKSNVEQLLESGKDVILE------IDIQGALKVK 113

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           ++                    I  LP   +    R+  R S    + +  F
Sbjct: 114 ENTEEG--------------VFIFILPPSMEELKARIIKRGSETPESLMKRF 151


>gi|171185428|ref|YP_001794347.1| ABC transporter related [Thermoproteus neutrophilus V24Sta]
 gi|170934640|gb|ACB39901.1| ABC transporter related [Thermoproteus neutrophilus V24Sta]
          Length = 202

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G  G+GKTT +  L   L+    +V++     G P AEA R +
Sbjct: 34 GPNGSGKTTLLKTLAGLLKPDEGEVYI----DGAPLAEALRRM 72


>gi|158536906|gb|ABW73014.1| deoxyribonucleoside kinase [Eufriesea pulchra]
          Length = 142

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 78  HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE--VMPDCTII 135
           HV     P  +  + +   R    +          +   L+   +  +Q   +  D  I 
Sbjct: 54  HVYKSSMPYKIMERSIFSARCFIENMKRTKLLPDVEIEILEDWHDWCIQNVNIETDLIIY 113

Query: 136 LDLPVDIGLKRVQNRYSLRESA 157
           L    ++  +R+Q R    E++
Sbjct: 114 LRSSPEVAYQRIQTRARKEENS 135


>gi|157823805|ref|NP_001099941.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Rattus
           norvegicus]
 gi|149025974|gb|EDL82217.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 (predicted)
           [Rattus norvegicus]
          Length = 581

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 25/76 (32%), Gaps = 17/76 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104

Query: 71  FAAARLDHVENVIRPA 86
               R ++V  +   A
Sbjct: 105 ---DREENVRRIAEVA 117


>gi|118588245|ref|ZP_01545654.1| alpha-glucoside ABC transporter, ATP-binding protein [Stappia
           aggregata IAM 12614]
 gi|118438951|gb|EAV45583.1| alpha-glucoside ABC transporter, ATP-binding protein [Stappia
           aggregata IAM 12614]
          Length = 363

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 34/96 (35%), Gaps = 8/96 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHV 53
           +N+G  I F G  G GK+T + ++          L+     V     P     A   +  
Sbjct: 26  INAGELIVFVGPSGCGKSTLLRMIAGLEKITGGELEIDGV-VVNDVPPAQRGIAMVFQSY 84

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89
            L   +  +   A A+  A    D ++  +R A   
Sbjct: 85  ALYPHMTVYDNMAFALKLAGKSRDEIDRAVRAAADR 120


>gi|42518159|ref|NP_964089.1| ABC transporter ATPase component [Lactobacillus johnsonii NCC
          533]
 gi|41582443|gb|AAS08055.1| ABC transporter ATPase component [Lactobacillus johnsonii NCC
          533]
          Length = 448

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI   G  G+GK+T + L+ 
Sbjct: 28 INQGDFILLTGPSGSGKSTLLKLVA 52


>gi|27378159|ref|NP_769688.1| arginine/ornithine transport system ATPase [Bradyrhizobium
           japonicum USDA 110]
 gi|27351306|dbj|BAC48313.1| bll3048 [Bradyrhizobium japonicum USDA 110]
          Length = 329

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 9/61 (14%)

Query: 11  GIEGA---GKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDE 61
           GI G+   GK+T I  L  +L  + + V  +  +P     GG+   +  R   LS   D 
Sbjct: 61  GITGSPGVGKSTTIDALGTYLIEQGHKVAVLAVDPSSARSGGSILGDKTRMARLSASDDA 120

Query: 62  F 62
           F
Sbjct: 121 F 121


>gi|89076091|ref|ZP_01162451.1| putative cell division protein FtsY [Photobacterium sp. SKA34]
 gi|89048243|gb|EAR53825.1| putative cell division protein FtsY [Photobacterium sp. SKA34]
          Length = 346

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 149 GVNGVGKTTTIGKLAKQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 204

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I  A  +   +++ D            R  ++   ++ L++I 
Sbjct: 205 TGADSASVIFDAIESAKAKNIDVVIAD---------TAGRLQNKGNLMEELRKIV 250


>gi|315638862|ref|ZP_07894034.1| adenylyl-sulfate kinase [Campylobacter upsaliensis JV21]
 gi|315481080|gb|EFU71712.1| adenylyl-sulfate kinase [Campylobacter upsaliensis JV21]
          Length = 174

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 7/61 (11%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I F G+ G+GK+     L   L+ K  +V            +  R +L   G D+ 
Sbjct: 6  KGGVIWFSGLAGSGKSFLAEALCEKLRTKLRNVIYL-------DGDELRELLGHFGYDKA 58

Query: 63 G 63
           
Sbjct: 59 S 59


>gi|317063249|ref|ZP_07927734.1| signal recognition particle protein [Fusobacterium ulcerans ATCC
           49185]
 gi|313688925|gb|EFS25760.1| signal recognition particle protein [Fusobacterium ulcerans ATCC
           49185]
          Length = 448

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT  + L  +L+++   V + 
Sbjct: 109 GLQGAGKTTFAAKLANYLKKQGESVLMV 136


>gi|313891957|ref|ZP_07825558.1| guanylate kinase [Dialister microaerophilus UPII 345-E]
 gi|313119600|gb|EFR42791.1| guanylate kinase [Dialister microaerophilus UPII 345-E]
          Length = 214

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 62/175 (35%), Gaps = 32/175 (18%)

Query: 1   MNS----GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLL 55
           MN+    G+ +   G  GAGK T    +++      Y V   TR P      +   +   
Sbjct: 1   MNNKKDEGILLVVSGPSGAGKGTICDEIRKMNPDLFYSVSMTTRSPRKNE-KDGINYYFR 59

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIR----PALMEGKILLCDRFLDSSYAYQGERDS 111
           S    E   + +A +  A   D+    ++      L +GK +L +  +D   A Q +   
Sbjct: 60  SVEEFEKLIKEDAFLEYARVYDNYYGTLKQNTFDLLKQGKSILLE--IDIQGAMQVKERY 117

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER 164
            + +F                 I + +P   +I  +R+  R +  E +      +
Sbjct: 118 PKGVF-----------------IYI-VPPSLEILSERIHKRGTDSEESIRKRLSQ 154


>gi|300858747|ref|YP_003783730.1| signal recognition particle protein [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686201|gb|ADK29123.1| signal recognition particle protein [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206454|gb|ADL10796.1| Signal recognition particle protein (Fifty-four-like protein)
           [Corynebacterium pseudotuberculosis C231]
 gi|302331010|gb|ADL21204.1| signal recognition particle protein [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276696|gb|ADO26595.1| Signal recognition particle protein (Fifty-four-like protein)
           [Corynebacterium pseudotuberculosis I19]
          Length = 535

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 22/139 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60
           G++GAGKTT    L + LQ + +   +       P A     ++             G  
Sbjct: 107 GLQGAGKTTLAGKLAKHLQSQGHTPMLVACDLQRPGAVQQLQIVGERAGVPTFAPDPGTS 166

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               + E        +      I  A   +  +++ D            R       +  
Sbjct: 167 IDSNDHEMGTSHGDPVGVARQGIEEAKRAQHDVVIVD---------TAGRLGIDETLMTQ 217

Query: 120 LQEISVQEVMPD-CTIILD 137
            + I    + PD    ++D
Sbjct: 218 ARNI-RDAIRPDEVLFVID 235


>gi|257460582|ref|ZP_05625683.1| guanylate kinase [Campylobacter gracilis RM3268]
 gi|257441913|gb|EEV17055.1| guanylate kinase [Campylobacter gracilis RM3268]
          Length = 204

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 5/99 (5%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  +   G  G+GK+T I  L      + Y      TRE     A     H +      
Sbjct: 2   KGKILLVSGPSGSGKSTLIKRLITEFGEQIYFSISSTTREMRAGEADGVNYHFISESEFR 61

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILLCD 96
                 E + +A     +    ++ A   L  GKI++ D
Sbjct: 62  AGIERGEFLEWALVHGKYYGTSLKAATSELERGKIVIFD 100


>gi|256851462|ref|ZP_05556851.1| excinuclease ABC, A subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260660883|ref|ZP_05861798.1| excinuclease ABC, A subunit [Lactobacillus jensenii 115-3-CHN]
 gi|256616524|gb|EEU21712.1| excinuclease ABC, A subunit [Lactobacillus jensenii 27-2-CHN]
 gi|260548605|gb|EEX24580.1| excinuclease ABC, A subunit [Lactobacillus jensenii 115-3-CHN]
          Length = 957

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F+   G+ G+GK+T +       L + L   +       +  G    E    +
Sbjct: 639 GKFVVVTGVSGSGKSTLVNTILKRALAQKLNHNSAKPGKFEKITGYKDIEKIIDI 693


>gi|241889666|ref|ZP_04776964.1| spermidine/putrescine import ATP-binding protein PotA [Gemella
          haemolysans ATCC 10379]
 gi|241863288|gb|EER67672.1| spermidine/putrescine import ATP-binding protein PotA [Gemella
          haemolysans ATCC 10379]
          Length = 362

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GK+T + L+  FL   + DV +
Sbjct: 29 KGKFYTLLGPSGCGKSTILKLIGGFLSPTSGDVLL 63


>gi|228920497|ref|ZP_04083842.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar huazhongensis BGSC 4BD1]
 gi|228839127|gb|EEM84423.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar huazhongensis BGSC 4BD1]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|228952168|ref|ZP_04114260.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar kurstaki str. T03a001]
 gi|229069336|ref|ZP_04202626.1| ABC transporter ATP-binding protein [Bacillus cereus F65185]
 gi|228713823|gb|EEL65708.1| ABC transporter ATP-binding protein [Bacillus cereus F65185]
 gi|228807522|gb|EEM54049.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar kurstaki str. T03a001]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229172435|ref|ZP_04299994.1| ABC transporter ATP-binding protein [Bacillus cereus MM3]
 gi|228610906|gb|EEK68169.1| ABC transporter ATP-binding protein [Bacillus cereus MM3]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|297206277|ref|ZP_06923672.1| excision endonuclease subunit UvrA [Lactobacillus jensenii JV-V16]
 gi|297149403|gb|EFH29701.1| excision endonuclease subunit UvrA [Lactobacillus jensenii JV-V16]
          Length = 946

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F+   G+ G+GK+T +       L + L   +       +  G    E    +
Sbjct: 628 GKFVVVTGVSGSGKSTLVNTILKRALAQKLNHNSAKPGKFEKITGYKDIEKIIDI 682


>gi|224477492|ref|YP_002635098.1| hypothetical protein Sca_2008 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422099|emb|CAL28913.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 476

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47
           L + FEG++ AGK  +I  ++  L    Y+V+    P     A
Sbjct: 277 LILVFEGMDAAGKGGNIKRIREKLDPTGYEVNAISAPTDVELA 319


>gi|219124109|ref|XP_002182354.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406315|gb|EEC46255.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1314

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 5/92 (5%)

Query: 16   GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
            GKTT ++ +  FL+ + ++V    E      +        S        ++  +      
Sbjct: 958  GKTTALARVFNFLRERGFEVITCPEAYTLLMSNGMSVDFFSTPGMGRIIQSTVLDVQLNL 1017

Query: 76   LDHVENVIRPALMEGK--ILLCDRFLDSSYAY 105
             D+V  V++     GK  I+LCDR       Y
Sbjct: 1018 EDNVARVLK---ARGKPGIILCDRGSMDGTVY 1046


>gi|241206077|ref|YP_002977173.1| glycerol-3-phosphate transporter ATP-binding subunit [Rhizobium
          leguminosarum bv. trifolii WSM1325]
 gi|240859967|gb|ACS57634.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM1325]
          Length = 369

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI   G  G GK+T + ++ 
Sbjct: 26 IQSGEFIVILGPSGCGKSTLLRMIA 50


>gi|121535504|ref|ZP_01667313.1| cell division ATP-binding protein FtsE [Thermosinus
          carboxydivorans Nor1]
 gi|121305923|gb|EAX46856.1| cell division ATP-binding protein FtsE [Thermosinus
          carboxydivorans Nor1]
          Length = 228

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 6  FISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAE 48
          FI   G  GAGK+T I LL +  L    + V      G    +E
Sbjct: 32 FIV--GPSGAGKSTLIKLLFREELPTSGHLVVNGWNVGQMRPSE 73


>gi|118477218|ref|YP_894369.1| ABC transporter ATP-binding protein [Bacillus thuringiensis str.
          Al Hakam]
 gi|118416443|gb|ABK84862.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis str.
          Al Hakam]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|116623522|ref|YP_825678.1| ABC transporter-like protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226684|gb|ABJ85393.1| ABC transporter related [Candidatus Solibacter usitatus Ellin6076]
          Length = 598

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 24/53 (45%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           N G  I+F G  GAGKTT + LL    + K   ++    P    A E  R  +
Sbjct: 372 NRGETIAFVGPSGAGKTTLVKLLVGLYRPKAGHIYYNEVPEDEIAIEDLRERI 424


>gi|108864009|gb|ABA91534.2| ABC transporter family protein, expressed [Oryza sativa Japonica
           Group]
          Length = 674

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 8   SFEGIE--------GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +FEG +        G+GKTT I  L R ++     + +      T      R  L
Sbjct: 452 TFEGGDKIGIVGRTGSGKTTLIGALFRLVEPAGGKIIIDSADITTIGLHDLRSCL 506


>gi|18104267|gb|AAL59453.1| unknown [Enterococcus faecalis]
          Length = 747

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 238 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 277


>gi|91786756|ref|YP_547708.1| ABC transporter-like protein [Polaromonas sp. JS666]
 gi|91695981|gb|ABE42810.1| carbohydrate ABC transporter ATP-binding protein, CUT1 family
           [Polaromonas sp. JS666]
          Length = 340

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 6/70 (8%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           FI   G  G GK+T + ++    +           V    EP     A   ++  L   +
Sbjct: 35  FIVIVGPSGCGKSTLLRMVAGLEEISEGQIAIGGKVVNDLEPAERDIAMVFQNYALYPHM 94

Query: 60  DEFGAEAEAI 69
             F   A  +
Sbjct: 95  SVFDNMAYGL 104


>gi|34556561|ref|NP_906376.1| toluene tolerance protein TTG2A [Wolinella succinogenes DSM 1740]
 gi|34482275|emb|CAE09276.1| TOLUENE TOLERANCE PROTEIN TTG2A [Wolinella succinogenes]
          Length = 250

 Score = 35.8 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 10/41 (24%)

Query: 7  ISFE----------GIEGAGKTTHISLLKRFLQRKNYDVHV 37
          I+ E          G+ G+GK+T I L+ R L+    D+ +
Sbjct: 20 ITLEAKEGKTTVIFGLSGSGKSTIIKLIVRLLEPDGGDILL 60


>gi|330992593|ref|ZP_08316541.1| ATP-dependent DNA helicase dda [Gluconacetobacter sp. SXCC-1]
 gi|329760792|gb|EGG77288.1| ATP-dependent DNA helicase dda [Gluconacetobacter sp. SXCC-1]
          Length = 442

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVT 38
          G GKTT +  + R L+++  +V  T
Sbjct: 34 GTGKTTLMRHVARALRKQGAEVVFT 58


>gi|315027537|gb|EFT39469.1| conserved hypothetical protein [Enterococcus faecalis TX2137]
          Length = 505

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 16 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 55


>gi|307272136|ref|ZP_07553397.1| conserved domain protein [Enterococcus faecalis TX0855]
 gi|306511186|gb|EFM80195.1| conserved domain protein [Enterococcus faecalis TX0855]
          Length = 253

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 129 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 168


>gi|296133486|ref|YP_003640733.1| adenylate kinase [Thermincola sp. JR]
 gi|296032064|gb|ADG82832.1| adenylate kinase [Thermincola potens JR]
          Length = 214

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 74/237 (31%), Gaps = 66/237 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   +L + L                   +  R  +      E G +A+  +
Sbjct: 7   GPPGAGKGTQAEVLVKEL-----------NITHISTGDMFRAAIKEG--TEMGKKAKEYM 53

Query: 71  FAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
               +   V + +          +P   +G   L D F   + A Q E  S     +   
Sbjct: 54  ---DKGQLVPDEVVVGMVKDRLSQPDCEKGF--LLDGFPR-TIA-QAEALSKTLDEM--- 103

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-----LDYFERKDV------MI 169
                  +  D  I +++P +  L R+  R   +          +  E++ V       +
Sbjct: 104 ------GIKLDGVINIEVPREKLLARLTGRRVCKSCGASYHVLFNPPEKEGVCNNCGGEL 157

Query: 170 HEK----------RRQIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVWE 210
           +++          R  ++ +    +     ++  +  ++       V  +IL  + +
Sbjct: 158 YQRSDDNEETVNNRLDVYEEQTQPLIDYYKEKGLLININGDQPIDKVLADILAALRK 214


>gi|293374743|ref|ZP_06621051.1| signal recognition particle-docking protein FtsY [Turicibacter
           sanguinis PC909]
 gi|325837606|ref|ZP_08166453.1| signal recognition particle-docking protein FtsY [Turicibacter sp.
           HGF1]
 gi|292646657|gb|EFF64659.1| signal recognition particle-docking protein FtsY [Turicibacter
           sanguinis PC909]
 gi|325490908|gb|EGC93207.1| signal recognition particle-docking protein FtsY [Turicibacter sp.
           HGF1]
          Length = 335

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I+ +   L+ K   V +    G T  A A     L    D  G + 
Sbjct: 129 ILFVGVNGVGKTTSIAKIAHQLKGKGKSVLLAA--GDTFRAGAIEQ--LQVWGDRIGVDV 184

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
            ++   +     + + I+ A      +LLCD
Sbjct: 185 VSLSEGSDPSAVMFDAIKEAKARNVDVLLCD 215


>gi|293364350|ref|ZP_06611076.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307702683|ref|ZP_07639635.1| phosphoribulokinase [Streptococcus oralis ATCC 35037]
 gi|291317196|gb|EFE57623.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307623799|gb|EFO02784.1| phosphoribulokinase [Streptococcus oralis ATCC 35037]
          Length = 208

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 22/173 (12%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK+T    L + L     ++  T      P   + RH++     +    +  A +  A 
Sbjct: 30  SGKSTFAQELYQALDSTIVNLLET-----DPYITSNRHLV--VPKELPDQKVTACLPVAH 82

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP---- 130
            L+ +E  I  AL  G  +L    +D  +        S+ + +  ++ +SV   +P    
Sbjct: 83  ELESLERDIL-ALQAGMDILT---IDEPWKPSEVLSGSKPILV--VEGMSV-GFLPKELF 135

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           D TI      +  LKR   R +   +    +     +  H+ RR+ +    R 
Sbjct: 136 DKTICFYTDEETELKRRLARDTTMRNRDASFI----LASHQMRREQYQRYYRE 184


>gi|257080250|ref|ZP_05574611.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256988280|gb|EEU75582.1| conserved hypothetical protein [Enterococcus faecalis JH1]
          Length = 747

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 238 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 277


>gi|253580313|ref|ZP_04857579.1| ABC transporter ATPase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848406|gb|EES76370.1| ABC transporter ATPase [Ruminococcus sp. 5_1_39BFAA]
          Length = 260

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 9/93 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-VLLSCGV 59
           +N G  I  +G  G GK+T I LL          +    E              L +   
Sbjct: 61  INRGDSIVIQGPNGCGKSTLIKLL--------NGIIFPSEGKYFYQGHEINEKALKNSQF 112

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92
            ++  +    VF  A        +   +  G +
Sbjct: 113 AKWFHQQMGYVFQNADAQLFCGSVEEEIAFGPV 145


>gi|229823183|ref|ZP_04449252.1| hypothetical protein GCWU000282_00480 [Catonella morbi ATCC
          51271]
 gi|229787349|gb|EEP23463.1| hypothetical protein GCWU000282_00480 [Catonella morbi ATCC
          51271]
          Length = 363

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G F +  G  G GKTT + ++  F    +  V++  EP
Sbjct: 32 KGKFYTLLGPSGCGKTTILRIIAGFSSATSGQVYLDGEP 70


>gi|218682997|ref|ZP_03530598.1| hypothetical protein RetlC8_29891 [Rhizobium etli CIAT 894]
          Length = 187

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 62/228 (27%), Gaps = 71/228 (31%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+G T+    L   L   + D          P    AR                 ++
Sbjct: 7   GASGSGTTSLGLALAEKLDIAHLDTDDFFWLPTEPPYTTARDA---------DERIRLLL 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             AAR D               +L                 S   +   L+         
Sbjct: 58  ETAARHD-------------GWVLS---------------GSALKWGGPLEPFY------ 83

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ----PD 186
           D  + L +  ++ + R++ R   R    +         +  K R+ F++ A +     P+
Sbjct: 84  DLIVFLRIEPELRMARIRAREVARYGERI----GPGGDMEVKSRE-FMEWAASYDTAGPE 138

Query: 187 R----------------CHIVDSAHSFQSVATNIL---NIVWELVQKR 215
           R                   +DS+     +   +L    I    V++R
Sbjct: 139 RRSLAAHEQWLETQTGPVLRLDSSREIDDLTAGVLLHPAIAAGAVRRR 186


>gi|206969417|ref|ZP_03230371.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1134]
 gi|218899944|ref|YP_002448355.1| ABC transporter, ATP-binding protein [Bacillus cereus G9842]
 gi|206735105|gb|EDZ52273.1| ABC transporter, ATP-binding protein [Bacillus cereus AH1134]
 gi|218542702|gb|ACK95096.1| ABC transporter, ATP-binding protein [Bacillus cereus G9842]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 33 GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 85


>gi|167838438|ref|ZP_02465297.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Burkholderia thailandensis MSMB43]
          Length = 252

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 19/50 (38%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          +G  ++  G  GAGK+T ++ +   L    +     R  G    A     
Sbjct: 34 AGRIVTVIGPNGAGKSTLLNAVMGALPTNGHAAGTVRYRGDDVGALPIEQ 83


>gi|161528562|ref|YP_001582388.1| ATPase [Nitrosopumilus maritimus SCM1]
 gi|160339863|gb|ABX12950.1| PilT protein domain protein [Nitrosopumilus maritimus SCM1]
          Length = 605

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 9/57 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           I   G  G+GK+T  S L  F   K   V     P         R + +  G+ ++ 
Sbjct: 263 IVISGAPGSGKSTLASGLANFYHNKGKIVKTFESP---------RDLQVDPGITQYS 310


>gi|154149071|ref|YP_001406310.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter hominis ATCC BAA-381]
 gi|153805080|gb|ABS52087.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter hominis ATCC BAA-381]
          Length = 158

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 16/33 (48%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          ++F G   +GKTT I  + +      Y V + +
Sbjct: 6  VAFSGPSNSGKTTLIRKVAKNFIDLGYKVVIIK 38


>gi|119483596|ref|XP_001261701.1| hypothetical protein NFIA_094240 [Neosartorya fischeri NRRL 181]
 gi|119409857|gb|EAW19804.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
          Length = 916

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS 56
           I  EG EG GK+T   +    L      D    RE  G   A      L  
Sbjct: 112 IVLEGNEGTGKSTVARIYANVLFSTGITDELTFREISGAALAAQGPEGLKH 162


>gi|116253545|ref|YP_769383.1| glycerol-3-phosphate transporter ATP-binding subunit [Rhizobium
          leguminosarum bv. viciae 3841]
 gi|122988405|sp|Q1MCN6|UGPC1_RHIL3 RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
          UgpC 1
 gi|115258193|emb|CAK09294.1| putative ATP-binding component of ABC transporter [Rhizobium
          leguminosarum bv. viciae 3841]
          Length = 369

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI   G  G GK+T + ++ 
Sbjct: 26 IQSGEFIVILGPSGCGKSTLLRMIA 50


>gi|115484257|ref|NP_001065790.1| Os11g0155600 [Oryza sativa Japonica Group]
 gi|113644494|dbj|BAF27635.1| Os11g0155600 [Oryza sativa Japonica Group]
          Length = 675

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 8   SFEGIE--------GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +FEG +        G+GKTT I  L R ++     + +      T      R  L
Sbjct: 453 TFEGGDKIGIVGRTGSGKTTLIGALFRLVEPAGGKIIIDSADITTIGLHDLRSCL 507


>gi|153951731|ref|YP_001398100.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939177|gb|ABS43918.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter jejuni subsp. doylei 269.97]
          Length = 163

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M   L I+F G   +GKTT I+ +     ++N  V + +
Sbjct: 1  MKQ-LIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIK 38


>gi|91775844|ref|YP_545600.1| arsenite-activated ATPase (arsA) [Methylobacillus flagellatus KT]
 gi|91709831|gb|ABE49759.1| arsenite efflux ATP-binding protein ArsA [Methylobacillus
           flagellatus KT]
          Length = 587

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 13/81 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L  +   VH+T         +     L +  V 
Sbjct: 333 MGKG---------GVGKTTLAAAIAVELAHRGLPVHLTTSDPAAHLTDTLDSSLDNLTVS 383

Query: 61  EFGAEAEAIVFAAARLDHVEN 81
                AE   +      HV  
Sbjct: 384 RIDPHAETERY----RQHVLE 400


>gi|42780882|ref|NP_978129.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987]
 gi|42736803|gb|AAS40737.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|50292877|ref|XP_448871.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528184|emb|CAG61841.1| unnamed protein product [Candida glabrata]
          Length = 207

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 48/136 (35%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+  +GK+T    L++ L +K    +                  L      FG   +   
Sbjct: 35  GLSASGKSTIACALEQLLLQKGLSAYR-----------------LDGDNIRFGLNKDLGF 77

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             A R +++  +   +      L  D    S  ++     + +    +  +E  ++ +  
Sbjct: 78  SEADRNENIRRISEVSK-----LFADSCTISITSFISPYRTDRDKARELHKEAGLRFIE- 131

Query: 131 DCTIILDLPVDIGLKR 146
              + +D+P+++  +R
Sbjct: 132 ---VFVDVPLEVAEQR 144


>gi|148545025|ref|YP_001272395.1| ABC transporter related [Lactobacillus reuteri DSM 20016]
 gi|184154359|ref|YP_001842700.1| ABC transporter ATP-binding component [Lactobacillus reuteri JCM
           1112]
 gi|194467267|ref|ZP_03073254.1| ABC transporter related [Lactobacillus reuteri 100-23]
 gi|227364173|ref|ZP_03848270.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM2-3]
 gi|325683376|ref|ZP_08162892.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM4-1A]
 gi|148532059|gb|ABQ84058.1| ABC transporter related [Lactobacillus reuteri DSM 20016]
 gi|183225703|dbj|BAG26220.1| ABC transporter ATP-binding component [Lactobacillus reuteri JCM
           1112]
 gi|194454303|gb|EDX43200.1| ABC transporter related [Lactobacillus reuteri 100-23]
 gi|227070812|gb|EEI09138.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM2-3]
 gi|324977726|gb|EGC14677.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri MM4-1A]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 45/188 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHV 53
           +N G FI+  G  GAGK+T  +++   L            D+  T E   T        V
Sbjct: 33  INEGDFITIVGTNGAGKSTLFNVIGGNLHADEGKILHNGQDITNTTEEQRTAF---LSRV 89

Query: 54  LLSCGVDEFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFL------------ 99
                +         E ++ A  R +   ++I   L        DRF             
Sbjct: 90  FQDPKLGTAARMTVAENMLLATKRGER-RHLIPRKLKSN----MDRFTKLAATMNNGLEN 144

Query: 100 ---DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRY 151
               ++ A  G +  +    + +++        PD  I+LD     L     L  +    
Sbjct: 145 RMNTATGALSGGQRQALSFLMATIK-------RPD-VILLDEHTAALDPHTSLNLLHATN 196

Query: 152 SLRESACL 159
                  L
Sbjct: 197 ERITKDHL 204


>gi|75758893|ref|ZP_00739005.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|228903294|ref|ZP_04067425.1| ABC transporter-related protein [Bacillus thuringiensis IBL 4222]
 gi|74493659|gb|EAO56763.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar israelensis ATCC 35646]
 gi|228856255|gb|EEN00784.1| ABC transporter-related protein [Bacillus thuringiensis IBL 4222]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 33 GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 85


>gi|108804277|ref|YP_644214.1| cytidylate kinase [Rubrobacter xylanophilus DSM 9941]
 gi|108765520|gb|ABG04402.1| cytidylate kinase [Rubrobacter xylanophilus DSM 9941]
          Length = 224

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/27 (25%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            G+ ++ +G  G+GK++   L+   L
Sbjct: 4  KRGIIVAIDGPAGSGKSSVARLVAERL 30


>gi|325968146|ref|YP_004244338.1| type II secretion system protein E [Vulcanisaeta moutnovskia
           768-28]
 gi|323707349|gb|ADY00836.1| type II secretion system protein E [Vulcanisaeta moutnovskia
           768-28]
          Length = 529

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 11/60 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ I+  G  GAGKTT    L  +       V     P         R ++L   + +  
Sbjct: 264 GILIA--GPPGAGKTTFAQALAEYYMSLGKVVKTVESP---------RDMILPNEITQIS 312


>gi|318080161|ref|ZP_07987493.1| ABC transporter [Streptomyces sp. SA3_actF]
          Length = 616

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 7/93 (7%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LS 56
           +++G  I+  G  GAGKTT   +L RFL  +     V   P      +A R ++      
Sbjct: 368 LDAGRRIAVVGASGAGKTTLAHVLLRFLDAEGGTYRVGDTPATALDGDAVREIVGLCAQD 427

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89
             V +       ++   AR D  E  +R  L  
Sbjct: 428 AHVFDSSVRENLLL---ARKDATEAELRAVLSR 457


>gi|322435167|ref|YP_004217379.1| signal recognition particle protein [Acidobacterium sp. MP5ACTX9]
 gi|321162894|gb|ADW68599.1| signal recognition particle protein [Acidobacterium sp. MP5ACTX9]
          Length = 465

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
           G++G+GKTT  + L ++L++  +   +       PAA A
Sbjct: 107 GLQGSGKTTTSAKLAQWLKKGGHRPMLVSVDVYRPAARA 145


>gi|291551139|emb|CBL27401.1| ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase
          components [Ruminococcus torques L2-14]
          Length = 363

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +N G  ++  G  G+GK+T +  + R L+    +V  
Sbjct: 28 INKGEIVTLIGPNGSGKSTILKSITRQLKVVGGNVFF 64


>gi|291522193|emb|CBK80486.1| signal recognition particle protein [Coprococcus catus GD/7]
          Length = 447

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 24/155 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++GAGKTT  + +   L+ K     +       PAA   + + ++             V
Sbjct: 109 GLQGAGKTTTSAKIAGKLKAKGRKPLLVACDVYRPAA--IKQLQVNGEKQGVP------V 160

Query: 71  FAAARLDHVENVIRPALMEGK-----ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           F+     +  ++ + A+   K     +++ D            R       ++ L  I  
Sbjct: 161 FSMGDHQNPVDIAKAAIEHAKNNDLNVVILD---------TAGRLHVDETMMEELANI-Q 210

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           + +  D TI + +    G   V    S  E   LD
Sbjct: 211 KAIKVDQTIFV-VDAMTGQDAVNVAKSFNEQIELD 244


>gi|256959471|ref|ZP_05563642.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256949967|gb|EEU66599.1| conserved hypothetical protein [Enterococcus faecalis DS5]
          Length = 698

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 189 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 228


>gi|254032674|gb|ACT54867.1| guanylate kinase-1 [Gryllus pennsylvanicus]
          Length = 52

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
          I   G  G+GK+T +  L      K  + V H TR+P
Sbjct: 9  IVVCGPSGSGKSTLLRRLFEEFPDKFGFSVSHTTRQP 45


>gi|254032672|gb|ACT54866.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032676|gb|ACT54868.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032678|gb|ACT54869.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032680|gb|ACT54870.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032682|gb|ACT54871.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032684|gb|ACT54872.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032686|gb|ACT54873.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032688|gb|ACT54874.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032690|gb|ACT54875.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032692|gb|ACT54876.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032694|gb|ACT54877.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032696|gb|ACT54878.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032698|gb|ACT54879.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032700|gb|ACT54880.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032702|gb|ACT54881.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032704|gb|ACT54882.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032706|gb|ACT54883.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032708|gb|ACT54884.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032710|gb|ACT54885.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032712|gb|ACT54886.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032714|gb|ACT54887.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032716|gb|ACT54888.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032718|gb|ACT54889.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032720|gb|ACT54890.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032722|gb|ACT54891.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032724|gb|ACT54892.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032726|gb|ACT54893.1| guanylate kinase-1 [Gryllus pennsylvanicus]
 gi|254032728|gb|ACT54894.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032730|gb|ACT54895.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032732|gb|ACT54896.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032734|gb|ACT54897.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032736|gb|ACT54898.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032738|gb|ACT54899.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032740|gb|ACT54900.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032742|gb|ACT54901.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032744|gb|ACT54902.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032746|gb|ACT54903.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032748|gb|ACT54904.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032750|gb|ACT54905.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032752|gb|ACT54906.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032754|gb|ACT54907.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032756|gb|ACT54908.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032758|gb|ACT54909.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032760|gb|ACT54910.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032762|gb|ACT54911.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032764|gb|ACT54912.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032766|gb|ACT54913.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032768|gb|ACT54914.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032770|gb|ACT54915.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032772|gb|ACT54916.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032774|gb|ACT54917.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032776|gb|ACT54918.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032778|gb|ACT54919.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032780|gb|ACT54920.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032782|gb|ACT54921.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032784|gb|ACT54922.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032786|gb|ACT54923.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032788|gb|ACT54924.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032790|gb|ACT54925.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032792|gb|ACT54926.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032794|gb|ACT54927.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032796|gb|ACT54928.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032798|gb|ACT54929.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032800|gb|ACT54930.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032802|gb|ACT54931.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032804|gb|ACT54932.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032812|gb|ACT54936.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032814|gb|ACT54937.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032816|gb|ACT54938.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032818|gb|ACT54939.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032820|gb|ACT54940.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032822|gb|ACT54941.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032824|gb|ACT54942.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032826|gb|ACT54943.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032828|gb|ACT54944.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032830|gb|ACT54945.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032832|gb|ACT54946.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032834|gb|ACT54947.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032836|gb|ACT54948.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032838|gb|ACT54949.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032840|gb|ACT54950.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032842|gb|ACT54951.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032844|gb|ACT54952.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032846|gb|ACT54953.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032848|gb|ACT54954.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032850|gb|ACT54955.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032852|gb|ACT54956.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032854|gb|ACT54957.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032860|gb|ACT54960.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032862|gb|ACT54961.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032864|gb|ACT54962.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032866|gb|ACT54963.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032868|gb|ACT54964.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032870|gb|ACT54965.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032872|gb|ACT54966.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032874|gb|ACT54967.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032876|gb|ACT54968.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032878|gb|ACT54969.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032880|gb|ACT54970.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032882|gb|ACT54971.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032884|gb|ACT54972.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032886|gb|ACT54973.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032888|gb|ACT54974.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032890|gb|ACT54975.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032892|gb|ACT54976.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032894|gb|ACT54977.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032896|gb|ACT54978.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032898|gb|ACT54979.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032900|gb|ACT54980.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032902|gb|ACT54981.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032904|gb|ACT54982.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032906|gb|ACT54983.1| guanylate kinase-1 [Gryllus firmus]
 gi|254032908|gb|ACT54984.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032910|gb|ACT54985.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032912|gb|ACT54986.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032914|gb|ACT54987.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032916|gb|ACT54988.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032918|gb|ACT54989.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032920|gb|ACT54990.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
 gi|254032922|gb|ACT54991.1| guanylate kinase-1 [Gryllus pennsylvanicus x Gryllus firmus]
          Length = 52

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
          I   G  G+GK+T +  L      K  + V H TR+P
Sbjct: 9  IVVCGPSGSGKSTLLRRLFEEFPDKFGFSVSHTTRQP 45


>gi|241765442|ref|ZP_04763411.1| ABC transporter related protein [Acidovorax delafieldii 2AN]
 gi|241364815|gb|EER59793.1| ABC transporter related protein [Acidovorax delafieldii 2AN]
          Length = 335

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 6/79 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLL 55
             G FI   G  G GK+T + ++    +           V    EP     A   ++  L
Sbjct: 31  KDGEFIVIVGPSGCGKSTLLRMVAGLEEITDGTISIGARVVNNLEPAQRDIAMVFQNYAL 90

Query: 56  SCGVDEFGAEAEAIVFAAA 74
              +  F   A  +  A A
Sbjct: 91  YPHMSVFDNMAYGLKIAKA 109


>gi|229078968|ref|ZP_04211520.1| ABC transporter ATP-binding protein [Bacillus cereus Rock4-2]
 gi|228704382|gb|EEL56816.1| ABC transporter ATP-binding protein [Bacillus cereus Rock4-2]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229121338|ref|ZP_04250569.1| ABC transporter ATP-binding protein [Bacillus cereus 95/8201]
 gi|228662183|gb|EEL17792.1| ABC transporter ATP-binding protein [Bacillus cereus 95/8201]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229149991|ref|ZP_04278216.1| ABC transporter ATP-binding protein [Bacillus cereus m1550]
 gi|228633429|gb|EEK90033.1| ABC transporter ATP-binding protein [Bacillus cereus m1550]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229181106|ref|ZP_04308438.1| ABC transporter-related protein [Bacillus cereus 172560W]
 gi|228602297|gb|EEK59786.1| ABC transporter-related protein [Bacillus cereus 172560W]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|227519154|ref|ZP_03949203.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
 gi|293382438|ref|ZP_06628374.1| conserved hypothetical protein [Enterococcus faecalis R712]
 gi|293387117|ref|ZP_06631680.1| conserved hypothetical protein [Enterococcus faecalis S613]
 gi|227073398|gb|EEI11361.1| conserved hypothetical protein [Enterococcus faecalis TX0104]
 gi|291080175|gb|EFE17539.1| conserved hypothetical protein [Enterococcus faecalis R712]
 gi|291083452|gb|EFE20415.1| conserved hypothetical protein [Enterococcus faecalis S613]
          Length = 732

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|225470382|ref|XP_002269899.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 208

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L +  +     +H+       E    P A   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSSLYQHCETMRRTIHIVNLDPAAESFDYPVAMDIRELVSLDDVMEELGL 68

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
               +     ++H+E  +   L +
Sbjct: 69 GPNGGLMYC--MEHLEENLDDWLTD 91


>gi|218674792|ref|ZP_03524461.1| glycerol-3-phosphate transporter ATP-binding subunit [Rhizobium
          etli GR56]
          Length = 94

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG F+   G  G GK+T + ++ 
Sbjct: 26 IKSGEFVVILGPSGCGKSTLLRMIA 50


>gi|220906475|ref|YP_002481786.1| ABC transporter [Cyanothece sp. PCC 7425]
 gi|219863086|gb|ACL43425.1| ABC transporter related [Cyanothece sp. PCC 7425]
          Length = 270

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEFGAEAEA 68
           G  GAGKTT  +LL  F++  +  V    EP G   P   A + +L +  V    +    
Sbjct: 55  GPNGAGKTTLFNLLCNFIRPDSGRVVFDGEPIGHHPPHNIALQGLLRTFQVARVLSRLSV 114

Query: 69  I--VFAAARLDHVENVIRPALMEGKI 92
           +  +  AA     E +    L   +I
Sbjct: 115 LENMLLAAPHQTGEKLWNSWLQPQQI 140


>gi|261406028|ref|YP_003242269.1| cytidylate kinase [Paenibacillus sp. Y412MC10]
 gi|261282491|gb|ACX64462.1| cytidylate kinase [Paenibacillus sp. Y412MC10]
          Length = 226

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 73/227 (32%), Gaps = 45/227 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAARHVLLSCGVD 60
           I+ +G  GAGK+T   ++   LQ         Y            + E    VL      
Sbjct: 14  IAIDGPAGAGKSTVARMVASRLQYIYVDTGAMYRAVTWFMLNQGISPENPEKVLQHAQNM 73

Query: 61  EFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
               +  E        +      + P +   ++        S+   Q  R     + L  
Sbjct: 74  VIELKPHE----NGQMVWLNGEDVTPYIRSHQV--------SAVVSQYARIEGLRIKLVR 121

Query: 120 LQE-------ISVQEVMPDC--TIILDLPVDIGL-----KRVQNRYSLRESACLDYFERK 165
           LQ+       + +     D   T++ D  V I +     +R   R+       +   E+ 
Sbjct: 122 LQQQMALDKGVVMDGR--DIGTTVLPDAEVKIFMTASVKERALRRFHELSDEGI-TLEQL 178

Query: 166 DVMIHEKRRQIFLDIARN-QPDRC----HIVDSAH-SFQSVATNILN 206
           +  I E+ R   LD  R   P RC     I+D+ H     V   IL+
Sbjct: 179 ERDIAERDR---LDQEREVSPLRCAEDAIILDTTHMDINQVVEAILS 222


>gi|218896721|ref|YP_002445132.1| ABC transporter, ATP-binding protein [Bacillus cereus G9842]
 gi|218541626|gb|ACK94020.1| ABC transporter, ATP-binding protein [Bacillus cereus G9842]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|220914924|ref|YP_002490232.1| aminoglycoside phosphotransferase [Methylobacterium nodulans ORS
           2060]
 gi|219952675|gb|ACL63065.1| aminoglycoside phosphotransferase [Methylobacterium nodulans ORS
           2060]
          Length = 526

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 65/206 (31%), Gaps = 52/206 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS-CGVDEFGAEAE 67
           G+ G+GK+T  + L  +L            P G     ++  R  L     V      A 
Sbjct: 339 GLSGSGKSTFAAALAPWLGA----------PPGARIVSSDRTRKRLHGVSAVTRLSDSAY 388

Query: 68  A-----IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           A      V+AA R +         L  G  ++ D                +    ++++ 
Sbjct: 389 APSVSERVYAAMRDEAAR-----VLATGGAVILD------------AVFDRPEAREAVEA 431

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
           ++ +  +P   + L  P  +   R++ R      A +               ++    A 
Sbjct: 432 LARRCGVPFRGVWLQAPAAMLAARIRARRDDPSDATI---------------EVLAAQAS 476

Query: 183 NQ--PDRCHIVDSAHSFQSVATNILN 206
               P   H +D+    +++   IL 
Sbjct: 477 RDCGPMTWHCLDAQLPAETLRATILA 502


>gi|157148294|ref|YP_001455613.1| adenylylsulfate kinase [Citrobacter koseri ATCC BAA-895]
 gi|166221084|sp|A8ANW4|CYSC_CITK8 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|157085499|gb|ABV15177.1| hypothetical protein CKO_04111 [Citrobacter koseri ATCC BAA-895]
          Length = 201

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  + F G+ G+GK+T    L+  L +                       LL      
Sbjct: 26  HKGAVVWFTGLSGSGKSTIAGALEEALHKLGIST-----------------WLLDGDNVR 68

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G  ++     A R +++     V    +  G ++L 
Sbjct: 69  HGLCSDLGFSDADRKENIRRVGEVANLMVDAGLVVLT 105


>gi|160903149|ref|YP_001568730.1| signal recognition particle-docking protein FtsY [Petrotoga mobilis
           SJ95]
 gi|160360793|gb|ABX32407.1| signal recognition particle-docking protein FtsY [Petrotoga mobilis
           SJ95]
          Length = 304

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G+ G+GKTT  + L +   ++  +V +      T  A A     L    +     
Sbjct: 102 LIV--GVNGSGKTTTAAKLAKMYSKQGKEVVLAA--ADTFRAAAIEQ--LKEWGNRLNTT 155

Query: 66  AEAIVFAAARLDHVENVIRPALMEGK-ILLCD 96
             A    +     V + I  A   GK ++L D
Sbjct: 156 VIAHQKGSDAAAVVYDAITHAKSRGKDVVLVD 187


>gi|55981409|ref|YP_144706.1| excinuclease ABC subunit A [Thermus thermophilus HB8]
 gi|62299023|sp|Q56242|UVRA_THET8 RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName:
           Full=Excinuclease ABC subunit A
 gi|55772822|dbj|BAD71263.1| excinuclease ABC subunit A (UvrA) [Thermus thermophilus HB8]
          Length = 952

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G  G+GK+T +  +L   L ++      T  PG   A E   H+
Sbjct: 636 GRFVAITGPSGSGKSTLVHDVLYAALAQRLMRAKTT--PGPYEALEGVEHL 684



 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 3  SGLFISFEGIEGAGKTTHI 21
           G FI   G+ G+GK+T  
Sbjct: 23 RGKFIVITGVSGSGKSTLA 41


>gi|11385310|pir||T46550 excinuclease ABC chain A [validated] - Thermus aquaticus
 gi|1325922|dbj|BAA08652.1| UvrA [Thermus thermophilus]
          Length = 952

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G  G+GK+T +  +L   L ++      T  PG   A E   H+
Sbjct: 636 GRFVAITGPSGSGKSTLVHDVLYAALAQRLMRAKTT--PGPYEALEGVEHL 684



 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 3  SGLFISFEGIEGAGKTTHI 21
           G FI   G+ G+GK+T  
Sbjct: 23 RGKFIVITGVSGSGKSTLA 41


>gi|326478460|gb|EGE02470.1| multidrug resistance protein 1 [Trichophyton equinum CBS 127.97]
          Length = 1275

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQ 29
            G +++  G  G+GK+T I LL+RF +
Sbjct: 1056 GQYVALVGPSGSGKSTVIRLLERFFE 1081


>gi|320163176|gb|EFW40075.1| helicase [Capsaspora owczarzaki ATCC 30864]
          Length = 1606

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            G+ G+GKTT I+ L R L  +   V +           A  ++LL       G E
Sbjct: 1192 GMPGSGKTTTIAELVRRLVAQGLSVLLCAY-----THTAVDNILLKMDDTMKGVE 1241


>gi|309774937|ref|ZP_07669956.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae
          bacterium 3_1_53]
 gi|308917334|gb|EFP63055.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae
          bacterium 3_1_53]
          Length = 210

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 29/57 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
          +N G FI   G  G+GK+T ++++    +  + D+ +       P ++ A+ +L + 
Sbjct: 27 INQGEFIVISGESGSGKSTLLNMIGLLDRPDSGDIELFSFKNVKPFSKIAQQLLKNK 83


>gi|302386902|ref|YP_003822724.1| ABC transporter [Clostridium saccharolyticum WM1]
 gi|302197530|gb|ADL05101.1| ABC transporter related protein [Clostridium saccharolyticum WM1]
          Length = 359

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 27 MKPGEFFTLLGPSGCGKTTLLRMIA 51


>gi|293366800|ref|ZP_06613476.1| cell division protein FtsY [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319101|gb|EFE59471.1| cell division protein FtsY [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736560|gb|EGG72826.1| signal recognition particle-docking protein FtsY [Staphylococcus
           epidermidis VCU045]
          Length = 408

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L    Q++   V +    G T  A A +   L+   +  G E  +  
Sbjct: 189 GVNGVGKTTTIGKLAYRYQQEGKKVMLAA--GDTFRAGAIQQ--LNVWGERVGVEVVSQN 244

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             +     V + I  A  +G  IL+CD
Sbjct: 245 EGSDPAAVVYDAINAAKNKGVDILICD 271


>gi|268610465|ref|ZP_06144192.1| uridine kinase (uridine monophosphokinase) [Ruminococcus
           flavefaciens FD-1]
          Length = 306

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFGA- 64
           I   G  G+GKTT   +L++ L  + ++ H         P  +  + +     VD     
Sbjct: 48  ILIAGPSGSGKTTTAMMLEKMLDERGHETHTISMDNYFCPLTDEEKELAALGKVDLESPA 107

Query: 65  --EAEAIVFAAARLDHVENVIRPALM 88
             + E +    + ++  E +  P   
Sbjct: 108 RVDKELLNQQISAIEKCEEIEIPKYN 133


>gi|262192510|ref|ZP_06050660.1| adenylylsulfate kinase [Vibrio cholerae CT 5369-93]
 gi|262031555|gb|EEY50143.1| adenylylsulfate kinase [Vibrio cholerae CT 5369-93]
          Length = 210

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++  L +                  A    LL       G   + 
Sbjct: 35  FTGLSGSGKSTLANAVEHHLFQL-----------------AKHTYLLDGDNLRCGLNRDL 77

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILL 94
               A R +++     V +  +  G I+L
Sbjct: 78  GFSEADRAENLRRVGEVCKLFVDSGTIVL 106


>gi|228900370|ref|ZP_04064599.1| ABC transporter ATP-binding protein [Bacillus thuringiensis IBL
          4222]
 gi|228859257|gb|EEN03688.1| ABC transporter ATP-binding protein [Bacillus thuringiensis IBL
          4222]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|228958067|ref|ZP_04119802.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar pakistani str. T13001]
 gi|228801584|gb|EEM48466.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar pakistani str. T13001]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|227327761|ref|ZP_03831785.1| adenylylsulfate kinase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 226

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ I F G+ G+GK+T    L++ L ++    +                 LL      
Sbjct: 51  HQGVVIWFTGLSGSGKSTLAGALEQVLHQRGVSTY-----------------LLDGDNVR 93

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +       R +++     V +  +  G ++L 
Sbjct: 94  HGLCRDLGFTDDDRRENIRRVGEVAKLMVDAGLVVLT 130


>gi|222106847|ref|YP_002547638.1| ABC transporter nucleotide binding/ATPase protein
          (spermidine/putrescine) [Agrobacterium vitis S4]
 gi|221738026|gb|ACM38922.1| ABC transporter nucleotide binding/ATPase protein
          (spermidine/putrescine) [Agrobacterium vitis S4]
          Length = 369

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G FI+F G  G GKTT + ++ 
Sbjct: 29 KKGEFIAFLGPSGCGKTTTLRMIA 52


>gi|193216479|ref|YP_001999721.1| cell division protein [Mycoplasma arthritidis 158L3-1]
 gi|193001802|gb|ACF07017.1| cell division protein [Mycoplasma arthritidis 158L3-1]
          Length = 351

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ G+GKTT IS L + L  +   V +
Sbjct: 152 GVNGSGKTTSISKLAKKLSSEGKKVLI 178


>gi|172037884|ref|YP_001804385.1| putative polyphosphate kinase 2 [Cyanothece sp. ATCC 51142]
 gi|171699338|gb|ACB52319.1| putative polyphosphate kinase 2 [Cyanothece sp. ATCC 51142]
          Length = 519

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 39/156 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            + FEG + AGK   I  L   L  ++Y VH    P                        
Sbjct: 323 LVLFEGWDAAGKGGAIKRLTDTLDPRSYKVHAFSAPT----------------------- 359

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERDSSQHLFLDSLQEIS 124
           +E + +      ++    R    +G I + DR         + E  +S+  +  S +EI+
Sbjct: 360 SEELNY-----HYLWRFWRQIPAQGSIGIFDRSWYGRVLVERVEGFASELEWRRSYKEIN 414

Query: 125 VQEVMPDCT--------IILDLPVDIGLKRVQNRYS 152
             E     T          L +  +  LKR ++R +
Sbjct: 415 --EFESQLTASGYVIVKFWLHISFEEQLKRFEDRKN 448


>gi|170586644|ref|XP_001898089.1| uridine monophosphate kinase [Brugia malayi]
 gi|158594484|gb|EDP33068.1| uridine monophosphate kinase, putative [Brugia malayi]
          Length = 250

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 50/158 (31%), Gaps = 19/158 (12%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAA--EAARHVLLSCGVDEFGAEAE 67
           G   +GK++  S +   L +     V    +     +   E  R         +     E
Sbjct: 24  GGTASGKSSVCSRIMEKLGKAHERRVVTISQDSFYRSLSDEEIRKANRGEFNFDHPDAIE 83

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI---- 123
             +  +         I   + +G+ ++  ++   + +   + D  +   +  ++ I    
Sbjct: 84  FTLMIS---------ILHKMKKGESVIVPKYDFCTNSRSKDSDVIESADVIIVEGILILY 134

Query: 124 --SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159
              ++ +  D  + +D   D  L R   R +      L
Sbjct: 135 DQELRNLF-DMKLFVDADSDDRLARRVQRDTQERGRSL 171


>gi|78044595|ref|YP_361088.1| cobalt ABC transporter ATP-binding protein [Carboxydothermus
          hydrogenoformans Z-2901]
 gi|77996710|gb|ABB15609.1| cobalt ABC transporter, ATP-binding protein [Carboxydothermus
          hydrogenoformans Z-2901]
          Length = 277

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREP 41
           G  ++  G  G+GKTT I LL   L+  + Y   + R P
Sbjct: 32 QGELVALVGPNGSGKTTFIKLLAGLLEPNEGYVEVLGRNP 71


>gi|78355558|ref|YP_387007.1| 6-phosphofructo-2-kinase [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
 gi|78217963|gb|ABB37312.1| 6-phosphofructo-2-kinase [Desulfovibrio desulfuricans subsp.
          desulfuricans str. G20]
          Length = 410

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          SGLFI   G+   GK+T  S L+  L+ +   V
Sbjct: 2  SGLFIVMVGLPARGKSTVASKLREGLESEGLRV 34


>gi|27467828|ref|NP_764465.1| signal recognition particle [Staphylococcus epidermidis ATCC 12228]
 gi|27315373|gb|AAO04507.1|AE016747_4 signal recognition particle [Staphylococcus epidermidis ATCC 12228]
 gi|329724316|gb|EGG60828.1| signal recognition particle-docking protein FtsY [Staphylococcus
           epidermidis VCU144]
 gi|329736323|gb|EGG72595.1| signal recognition particle-docking protein FtsY [Staphylococcus
           epidermidis VCU028]
          Length = 408

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L    Q++   V +    G T  A A +   L+   +  G E  +  
Sbjct: 189 GVNGVGKTTTIGKLAYRYQQEGKKVMLAA--GDTFRAGAIQQ--LNVWGERVGVEVVSQN 244

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             +     V + I  A  +G  IL+CD
Sbjct: 245 EGSDPAAVVYDAINAAKNKGVDILICD 271


>gi|54301859|ref|YP_131852.1| putative ATP-binding component of ABC transporter [Photobacterium
           profundum SS9]
 gi|46915279|emb|CAG22052.1| putative ATP-binding component of ABC transporter [Photobacterium
           profundum SS9]
          Length = 349

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 10/101 (9%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE------PGGTPAAEAARHVL 54
           +  G F++  G  G GK+T +  +       N +V V  E      P         +   
Sbjct: 26  IKQGEFVTLLGPSGCGKSTLLRCIAGLNDVDNGNVIVKGEDITHAAPQTRGIGMVFQSYA 85

Query: 55  LSCGVDEFGAEAEAIVF----AAARLDHVENVIRPALMEGK 91
           L   +  +   A  +      AA     V  VI    + G+
Sbjct: 86  LFPNMTVWDNIAFGLKMQKVSAADLKQQVGKVIELVELNGR 126


>gi|14209499|dbj|BAB55899.1| NodQ [Bradyrhizobium elkanii]
          Length = 627

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 20/92 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ GAGK+T  +++ + L                  A +   +LL       G  A
Sbjct: 456 IWFTGLSGAGKSTIANIVDQKL-----------------FAMSRHAMLLDGDNLRHGLNA 498

Query: 67  EAIVFAAARLDHVE---NVIRPALMEGKILLC 95
           +       R++++       +     G I++C
Sbjct: 499 DLGFSEVDRMENIRRAGEAAKLMADSGLIVIC 530


>gi|6093522|sp|P72339|NODQ_RHIS3 RecName: Full=Bifunctional enzyme nodQ; AltName: Full=Nodulation
           protein Q; Includes: RecName: Full=Sulfate
           adenylyltransferase subunit 1; AltName:
           Full=ATP-sulfurylase large subunit; AltName:
           Full=Sulfate adenylate transferase; Short=SAT; Includes:
           RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase
 gi|1531625|gb|AAB16902.1| NodQ [Rhizobium sp. N33]
          Length = 646

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L ++ L       +                 +L       G   + 
Sbjct: 468 FTGLSGSGKSTIANLFEKKLFATGRHTY-----------------ILDGDNVRHGLNRDL 510

Query: 69  IVFAAARLD---HVENVIRPALMEGKILL 94
               A R++    V  V R     G I++
Sbjct: 511 GFTEADRVENIRRVAEVARLMADAGLIVI 539


>gi|15604048|ref|NP_220563.1| signal recognition particle protein [Rickettsia prowazekii str.
           Madrid E]
 gi|6226156|sp|Q9ZDZ0|SRP54_RICPR RecName: Full=Signal recognition particle protein; AltName:
           Full=Fifty-four homolog
 gi|3860739|emb|CAA14640.1| SIGNAL RECOGNITION PARTICLE PROTEIN (ffh) [Rickettsia prowazekii]
 gi|292571768|gb|ADE29683.1| Signal recognition particle protein [Rickettsia prowazekii Rp22]
          Length = 449

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           L I   G++G GKTT    L   L+ +N  V +       PAA+    ++
Sbjct: 105 LLIV--GLQGGGKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQEQLAII 152


>gi|109900417|ref|YP_663672.1| ABC transporter related [Pseudoalteromonas atlantica T6c]
 gi|109702698|gb|ABG42618.1| mannitol ABC transporter ATP-binding protein / sorbitol ABC
          transporter ATP-binding protein [Pseudoalteromonas
          atlantica T6c]
          Length = 338

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI F G  G GK+T + ++ 
Sbjct: 29 GEFIVFVGPSGCGKSTLLRMIA 50


>gi|119715956|ref|YP_922921.1| exonuclease V subunit alpha [Nocardioides sp. JS614]
 gi|119536617|gb|ABL81234.1| ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase
           superfamily I member-like protein [Nocardioides sp.
           JS614]
          Length = 866

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G  +  EG  GAGKTT +   +  L R+ + + V 
Sbjct: 448 GPLVVVEGAAGAGKTTALRSAQATLARQGHRLLVV 482


>gi|108805158|ref|YP_645095.1| adenylylsulfate kinase [Rubrobacter xylanophilus DSM 9941]
 gi|108766401|gb|ABG05283.1| adenylylsulfate kinase [Rubrobacter xylanophilus DSM 9941]
          Length = 192

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          F G+ GAGKTT   ++++ L+ +   V
Sbjct: 14 FTGLSGAGKTTIAEIVEKELRERGRRV 40


>gi|67473183|ref|XP_652359.1| UMP-CMP kinase [Entamoeba histolytica HM-1:IMSS]
 gi|4099101|gb|AAD00547.1| UMP-CMP kinase [Entamoeba histolytica]
 gi|56469198|gb|EAL46973.1| UMP-CMP kinase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 202

 Score = 35.8 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 51/217 (23%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGK T    +        L   +     V RE  G+   +  + ++    +     
Sbjct: 13  GGPGAGKGTQCQKIINKYPITHLSAGDLLRAEVKRE--GSQNGQLIQTLIKEGKIVPAAV 70

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E ++ A    +H            K+ + D F             ++  +     +++
Sbjct: 71  TVELLLNAIRNDEH------------KVFIIDGF--------PRNAENKEAWFLQANKVN 110

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR---------- 174
           +        + +D+  +  + R+  R            +  D  + ++ R          
Sbjct: 111 IDTA---LCVFIDVSEETMINRIHKRSVNSG-----RVDDNDDSLMKRFRTYKSETLPVI 162

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + F        ++   V    S   +   I + + + 
Sbjct: 163 ESF-----ENENKLLRVSGEGSVDDIFNKIDSSLAKF 194


>gi|326470897|gb|EGD94906.1| multidrug resistance protein [Trichophyton tonsurans CBS 112818]
          Length = 1275

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQ 29
            G +++  G  G+GK+T I LL+RF +
Sbjct: 1056 GQYVALVGPSGSGKSTVIRLLERFFE 1081


>gi|326391102|ref|ZP_08212649.1| cytidylate kinase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992887|gb|EGD51332.1| cytidylate kinase [Thermoanaerobacter ethanolicus JW 200]
          Length = 221

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 65/246 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T    L + L     D           A +   +++    + +    A
Sbjct: 5   IAIDGPAGAGKSTVAKKLAKLLNYTYIDTGAMYRAITYKAIQQGVNLIEENKIADIVQSA 64

Query: 67  EAIV----FAAARLDHVENVIRP------------------------ALMEGKILLCDRF 98
           + I+          D  E + +P                         + EGK ++ D  
Sbjct: 65  DIILEEEKIFLDGKDISEEIRKPEVSEKVSLVSKIPKVREILVQKQRKIAEGKNVVMD-- 122

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNRYSLRES 156
                           + L            PD      L   ++   KR + R    ++
Sbjct: 123 ----------GRDIGTVVL------------PDAQFKFFLTASLEERAKR-RYRELKTKN 159

Query: 157 ACLDYFER----KDVMIHEKRRQIF-LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWE 210
             + Y+E     ++    + +R    L IA +      ++D+   S + V   + NI+ E
Sbjct: 160 VNVSYYEVLKEIENRDTIDSQRDTSPLKIAEDS----IVIDTTYLSEEEVLEKLYNIIKE 215

Query: 211 LVQKRV 216
            ++  +
Sbjct: 216 GLKGEI 221


>gi|325954487|ref|YP_004238147.1| LAO/AO transporter ATPase [Weeksella virosa DSM 16922]
 gi|323437105|gb|ADX67569.1| LAO/AO transport system ATPase [Weeksella virosa DSM 16922]
          Length = 321

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          I+  GI G GK+T I  L + L  +   V
Sbjct: 53 IAITGIPGVGKSTFIESLGKLLVNRGKKV 81


>gi|312978634|ref|ZP_07790368.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
 gi|311288550|gb|EFQ67106.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516]
          Length = 732

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|253582093|ref|ZP_04859317.1| ABC transporter [Fusobacterium varium ATCC 27725]
 gi|251836442|gb|EES64979.1| ABC transporter [Fusobacterium varium ATCC 27725]
          Length = 327

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK--RFLQRKNYDV----HVTREPGGTPAA 47
           G FI F G  G GKTT + ++     L   +  V      T EP     +
Sbjct: 34 KGEFICFLGPSGCGKTTLLRIIAGLEKLDSGSILVNGKEITTLEPSQRNLS 84


>gi|229029473|ref|ZP_04185555.1| ABC transporter ATP-binding protein [Bacillus cereus AH1271]
 gi|228731826|gb|EEL82726.1| ABC transporter ATP-binding protein [Bacillus cereus AH1271]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229084519|ref|ZP_04216794.1| Adenylyl-sulfate kinase [Bacillus cereus Rock3-44]
 gi|228698809|gb|EEL51519.1| Adenylyl-sulfate kinase [Bacillus cereus Rock3-44]
          Length = 197

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 28/117 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + + R L  KN                   + +L       G   + 
Sbjct: 30  FTGLSASGKSTVANAVARKLFEKNIG-----------------NYVLDGDNIRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               + R +++     V +  + +G I+L         A+       +    D L++
Sbjct: 73  GFSESDRTENIRRIGEVAKLFVDQGTIVLT--------AFISPFRVDRQQVRDILEK 121


>gi|227890280|ref|ZP_04008085.1| guanylate kinase [Lactobacillus johnsonii ATCC 33200]
 gi|268319208|ref|YP_003292864.1| hypothetical protein FI9785_722 [Lactobacillus johnsonii FI9785]
 gi|227849094|gb|EEJ59180.1| guanylate kinase [Lactobacillus johnsonii ATCC 33200]
 gi|262397583|emb|CAX66597.1| gmk [Lactobacillus johnsonii FI9785]
          Length = 204

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 60/170 (35%), Gaps = 27/170 (15%)

Query: 2   NSGLFISFEGIEGAGKTTH-ISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           + GL +   G  G GK T   +++K+      Y V   TR+P          + +     
Sbjct: 3   HQGLLLVLSGPSGVGKGTVKSAMVKQKAFSFEYSVSMTTRKPRPGEVNGKDYYFVSEDRF 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            E     E + +     +H    + P    L EGK +L +  +D + A Q          
Sbjct: 63  QEAIKGNELLEYNKYVGNHYGTPLAPVQNMLNEGKDVLLE--IDVNGAKQ---------- 110

Query: 117 LDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFER 164
                   V+++MPD   I   P D      R+ NR +  +       ++
Sbjct: 111 --------VRKLMPDGVFIFLTPPDLHELKHRIVNRGTDSDKVIAMRMKQ 152


>gi|227825185|ref|ZP_03990017.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905684|gb|EEH91602.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 264

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV 53
          M +G FI+  G  GAGK+T ++ +       +        E    P  + AR++
Sbjct: 29 METGDFITIIGGNGAGKSTLLNSIAGVFPIDEGSITIDDVELTQMPEHQRARYI 82


>gi|225849666|ref|YP_002729900.1| signal recognition particle-docking protein FtsY [Persephonella
           marina EX-H1]
 gi|225645118|gb|ACO03304.1| signal recognition particle-docking protein FtsY [Persephonella
           marina EX-H1]
          Length = 304

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I F GI G+GKTT I  L     ++   V +
Sbjct: 106 ILFLGINGSGKTTTIGKLASQFVQEGKSVVL 136


>gi|222617177|gb|EEE53309.1| hypothetical protein OsJ_36285 [Oryza sativa Japonica Group]
          Length = 401

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 54/168 (32%), Gaps = 37/168 (22%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  G GK T I+ L K +  +  + V H TR P          H      ++E  +
Sbjct: 150 IVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTERSKIEEEIS 209

Query: 65  EAEAIVFAAARLDHVE--------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E + + FA     HV           +     EGK  + D         QG   S +   
Sbjct: 210 EGKFLEFA-----HVHGNVYGTSVEAVESVTDEGKRCILD------IDVQGA-RSVRASS 257

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           L+++              I   P   +   KR++ R +  E       
Sbjct: 258 LEAI-------------FIFVCPPSFEELEKRLRARGTETEEQIQKRL 292


>gi|229916269|ref|YP_002884915.1| Shikimate kinase [Exiguobacterium sp. AT1b]
 gi|229467698|gb|ACQ69470.1| Shikimate kinase [Exiguobacterium sp. AT1b]
          Length = 162

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 13/78 (16%)

Query: 136 LDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLDIARNQPDRCHIVDSA 194
           L+LP D+  +R+++              R+DV  + ++R Q++   +         +D++
Sbjct: 97  LNLPFDMCWERIKDSARPLVKRG-----REDVHALFQRRDQLYRKAS-------VSIDAS 144

Query: 195 HSFQSVATNILNIVWELV 212
            S + +A  I+ I  E V
Sbjct: 145 QSPEDIAKQIIRIKGEKV 162


>gi|167535790|ref|XP_001749568.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771960|gb|EDQ85619.1| predicted protein [Monosiga brevicollis MX1]
          Length = 201

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 49/218 (22%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T  S + +      L     D+       G+  A+     +    +      
Sbjct: 11  GPPGAGKGTQSSNIVKNFNFTHLSAG--DLLRAERNTGSDLADLINGYIKEGKIVPVKIT 68

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                           +I  A+ E          +S +   G   +  +  LD   E+  
Sbjct: 69  C--------------GLIEKAMQED--------PNSKFLIDGFPRNKDN--LDGWNEVMA 104

Query: 126 QEVMPDCTIILDLPVDIG-------LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            +V     + LD P ++         +R  +R +       D  E       +KR   + 
Sbjct: 105 DKVDARFVLFLDCPAEVSGRLLLVSTERCLSRGAAGGGRVDDNLES-----LQKRHATYE 159

Query: 179 DIARNQPDRC------HIVDSAHSFQSVATNILNIVWE 210
           +  +   D          +D+     +V T++  +  E
Sbjct: 160 NETKPVLDEFLKQGMLRKIDATRDVDAVWTDVDALFRE 197


>gi|123441119|ref|YP_001005107.1| adenylylsulfate kinase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088080|emb|CAL10868.1| adenylylsulfate kinase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 188

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 20  FTGLSGSGKSTVAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 62

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R +++     V +  +  G ++L         A+     + + +  D L   + 
Sbjct: 63  GFSDADRRENIRRVGEVAKLMVDAGLVVLT--------AFISPHRAERKMVRDML---AS 111

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            +      + +D P+ I   R
Sbjct: 112 GQF---IEVFVDTPLAICEAR 129


>gi|123968603|ref|YP_001009461.1| ATP/GTP-binding motif-containing protein [Prochlorococcus marinus
           str. AS9601]
 gi|123198713|gb|ABM70354.1| ATP/GTP-binding site motif A (P-loop) [Prochlorococcus marinus str.
           AS9601]
          Length = 198

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 12/96 (12%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G+GKTT  + + +   +    V  T     T         LL   V+ F  
Sbjct: 2   KLIFISGPSGSGKTTLSNQIIKK-NKNGI-VLSTDNYYKTGLISK----LLPKFVEGFFD 55

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
            + +          +       + +  I +CDR+ +
Sbjct: 56  RSISFNNT------LFKKDFDFIYKNGISICDRYYN 85


>gi|86358967|ref|YP_470859.1| glycerol-3-phosphate transporter ATP-binding subunit [Rhizobium
          etli CFN 42]
 gi|123765736|sp|Q2K4V4|UGPC2_RHIEC RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
          UgpC 2
 gi|86283069|gb|ABC92132.1| sn-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Rhizobium etli CFN 42]
          Length = 369

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI   G  G GK+T + ++ 
Sbjct: 26 IQSGEFIVILGPSGCGKSTLLRMIA 50


>gi|84489906|ref|YP_448138.1| hypothetical protein Msp_1112 [Methanosphaera stadtmanae DSM 3091]
 gi|84373225|gb|ABC57495.1| CbiO2 [Methanosphaera stadtmanae DSM 3091]
          Length = 566

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLK 25
           N G +I+  G  G+GK+T + LL 
Sbjct: 325 NKGEYITIIGGNGSGKSTFLKLLA 348


>gi|30019828|ref|NP_831459.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579]
 gi|229127112|ref|ZP_04256109.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-Cer4]
 gi|29895373|gb|AAP08660.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579]
 gi|228656228|gb|EEL12069.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-Cer4]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|148254544|ref|YP_001239129.1| hypothetical protein BBta_3105 [Bradyrhizobium sp. BTAi1]
 gi|146406717|gb|ABQ35223.1| hypothetical protein BBta_3105 [Bradyrhizobium sp. BTAi1]
          Length = 259

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 13/32 (40%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
            +  EGI G+GK+T +  +   L        
Sbjct: 33 KLVIVEGIMGSGKSTSVRRIANRLNGSGIAAL 64


>gi|193065031|ref|ZP_03046106.1| adenylylsulfate kinase [Escherichia coli E22]
 gi|260845397|ref|YP_003223175.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O103:H2 str.
           12009]
 gi|192927328|gb|EDV81947.1| adenylylsulfate kinase [Escherichia coli E22]
 gi|257760544|dbj|BAI32041.1| adenosine 5'-phosphosulfate kinase [Escherichia coli O103:H2 str.
           12009]
          Length = 201

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T   +L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGVLEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|238784416|ref|ZP_04628426.1| Cell division protein ftsY [Yersinia bercovieri ATCC 43970]
 gi|238714708|gb|EEQ06710.1| Cell division protein ftsY [Yersinia bercovieri ATCC 43970]
          Length = 519

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 322 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 377

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 378 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 423


>gi|326486373|gb|ADZ76204.1| putative adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni]
 gi|326486411|gb|ADZ76240.1| putative adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni]
 gi|326486437|gb|ADZ76265.1| putative adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni]
          Length = 170

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
          + G    A+
Sbjct: 55 KQGRIDMAL 63


>gi|315928043|gb|EFV07362.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni
          DFVF1099]
          Length = 170

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
          + G    A+
Sbjct: 55 KQGRIDMAL 63


>gi|315125326|ref|YP_004067329.1| adenosine 5'-phosphosulfate kinase [Pseudoalteromonas sp. SM9913]
 gi|315013839|gb|ADT67177.1| adenosine 5'-phosphosulfate kinase [Pseudoalteromonas sp. SM9913]
          Length = 197

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 49/148 (33%), Gaps = 34/148 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +    I F G  G+GK+T  + L+  L ++    +                 LL      
Sbjct: 23  HKSAIIWFTGFSGSGKSTVANALEAALNQQGAHTY-----------------LLDGDNVR 65

Query: 62  FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +     A R++++  V    +  +  G ++L                S      D
Sbjct: 66  HGLCKDLGFSDADRVENIRRVGETAKLMVDAGLLVLT------------AFISPFKAERD 113

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146
            ++E+  +       + +D P+++   R
Sbjct: 114 MVRELVDEGEF--IEVFIDTPLEVCESR 139


>gi|312868471|ref|ZP_07728671.1| excinuclease ABC, A subunit [Streptococcus parasanguinis F0405]
 gi|311096216|gb|EFQ54460.1| excinuclease ABC, A subunit [Streptococcus parasanguinis F0405]
          Length = 941

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 13/67 (19%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLS 56
           G FI+  G+ G+GK+T I       + + L R       + +PG     +   H+  L+ 
Sbjct: 634 GKFIAVTGVSGSGKSTLINGILKKAIAQKLNRN------SEKPGKYKTIQGIEHIDRLID 687

Query: 57  CGVDEFG 63
                 G
Sbjct: 688 IDQSPIG 694


>gi|312902966|ref|ZP_07762156.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
 gi|310633661|gb|EFQ16944.1| conserved hypothetical protein [Enterococcus faecalis TX0635]
          Length = 732

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|294786884|ref|ZP_06752138.1| ABC transporter, ATP-binding protein [Parascardovia denticolens
           F0305]
 gi|315226520|ref|ZP_07868308.1| multidrug resistance ABC superfamily ATP binding cassette
           transporter, membrane protein [Parascardovia denticolens
           DSM 10105]
 gi|294485717|gb|EFG33351.1| ABC transporter, ATP-binding protein [Parascardovia denticolens
           F0305]
 gi|315120652|gb|EFT83784.1| multidrug resistance ABC superfamily ATP binding cassette
           transporter, membrane protein [Parascardovia denticolens
           DSM 10105]
          Length = 647

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 45/124 (36%), Gaps = 22/124 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVH--------VTREPGGTPAA----------E 48
           I+  G  GAGKTT ++LL RF +     +         +TR+   +              
Sbjct: 430 IAIVGPTGAGKTTLVNLLMRFYEVNGGSISIDGVKTTDITRQDLRSHFGMVLQDTWLFDG 489

Query: 49  AARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
             R  L     D      +  +  AA+  HV+  +R        +L +   DSS   QGE
Sbjct: 490 TIRDNLFYGVHDP-DRRTDQRMIEAAKATHVDEFVRRLPQGYDTVLEE---DSSELSQGE 545

Query: 109 RDSS 112
           R   
Sbjct: 546 RQLL 549


>gi|265993697|ref|ZP_06106254.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis bv. 3 str. Ether]
 gi|262764678|gb|EEZ10599.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis bv. 3 str. Ether]
          Length = 463

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 267 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 322

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 323 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 368


>gi|311235358|gb|ADP88212.1| ABC transporter related protein [Desulfovibrio vulgaris RCH1]
          Length = 236

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF-LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+  G  G+GK+T +++L    L    +   +      T A EA R+ L        
Sbjct: 45  GEFIAVVGRSGSGKSTLLNVLASLSLPDSGH--VLYEGEDITTATEARRNALRHRDFAVI 102

Query: 63  GAEAEAIVFAAARLDHVENVIRPALME 89
             +   + + +A    +ENV+ P +  
Sbjct: 103 FQQHHLMPYLSA----LENVLLPFMAS 125


>gi|239994821|ref|ZP_04715345.1| signal recognition particle GTPase [Alteromonas macleodii ATCC
           27126]
          Length = 382

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q++   V +    G T  A A   + +    ++    A+   
Sbjct: 181 GVNGVGKTTTIGKLAKQFQQEGKKVMLAA--GDTFRAAAVEQLQVWGERNDIPVIAQH-- 236

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + +  A   G  IL+ D
Sbjct: 237 TGADSASVLYDALEAAKSRGTDILIAD 263


>gi|257065129|ref|YP_003144801.1| ABC-type cobalamin/Fe3+-siderophore transport system, ATPase
          component [Slackia heliotrinireducens DSM 20476]
 gi|256792782|gb|ACV23452.1| ABC-type cobalamin/Fe3+-siderophore transport system, ATPase
          component [Slackia heliotrinireducens DSM 20476]
          Length = 259

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          G  ++  G  GAGK+T +  +  +L+     V+++ +P
Sbjct: 32 GRIVTLIGPNGAGKSTILKTVTGYLEPLGGAVYLSGKP 69


>gi|225853372|ref|YP_002733605.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis ATCC 23457]
 gi|256112266|ref|ZP_05453187.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis bv. 3 str. Ether]
 gi|256263146|ref|ZP_05465678.1| cell division protein FtsY [Brucella melitensis bv. 2 str. 63/9]
 gi|225641737|gb|ACO01651.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis ATCC 23457]
 gi|263093049|gb|EEZ17199.1| cell division protein FtsY [Brucella melitensis bv. 2 str. 63/9]
 gi|326409935|gb|ADZ67000.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis M28]
 gi|326539648|gb|ADZ87863.1| signal recognition particle-docking protein FtsY [Brucella
           melitensis M5-90]
          Length = 465

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 269 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 324

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 325 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 370


>gi|254508974|ref|ZP_05121080.1| adenylylsulfate kinase [Vibrio parahaemolyticus 16]
 gi|219548078|gb|EED25097.1| adenylylsulfate kinase [Vibrio parahaemolyticus 16]
          Length = 205

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENKLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSDQDRRENIRRIGELSKLMADAGLIVLS 109


>gi|210612596|ref|ZP_03289387.1| hypothetical protein CLONEX_01589 [Clostridium nexile DSM 1787]
 gi|210151521|gb|EEA82528.1| hypothetical protein CLONEX_01589 [Clostridium nexile DSM 1787]
          Length = 640

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 41/160 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T + ++ + L   + D+ +T+   G      ++H  LS G        E + 
Sbjct: 35  GPNGAGKSTILKMIMKELDTDSGDIILTK---GKTIGYLSQHQELSSGNTIL----EELK 87

Query: 71  FAAARLDHVENVIRPALMEGKIL--------------LCDRFLDSS-YAYQ--------- 106
            A A +  +E  IR   ME K L              L +RF  ++ YAYQ         
Sbjct: 88  TAKADIIEMEKQIRTIEMELKHLHGEDLENRLQTYHRLTERFEHANGYAYQSELVGVLKG 147

Query: 107 -GERDSSQHLFLDSLQ-----EISVQEV---MPDCTIILD 137
            G R+      +D+L       +S+ ++    PD  ++LD
Sbjct: 148 LGFREDEFLKEVDTLSGGQKTRVSLGKLLLTKPDI-LLLD 186


>gi|206890958|ref|YP_002249371.1| ABC transporter ATP-binding component [Thermodesulfovibrio
          yellowstonii DSM 11347]
 gi|206890974|ref|YP_002249421.1| ABC transporter ATP-binding component [Thermodesulfovibrio
          yellowstonii DSM 11347]
 gi|206742896|gb|ACI21953.1| ABC transporter ATP-binding component [Thermodesulfovibrio
          yellowstonii DSM 11347]
 gi|206742912|gb|ACI21969.1| ABC transporter ATP-binding component [Thermodesulfovibrio
          yellowstonii DSM 11347]
          Length = 584

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G +GAGKT+ I +L   L+       V
Sbjct: 40 GPDGAGKTSIIQILAGVLKADGGKAFV 66


>gi|218232676|ref|YP_002366471.1| ABC transporter, ATP-binding protein [Bacillus cereus B4264]
 gi|218160633|gb|ACK60625.1| ABC transporter, ATP-binding protein [Bacillus cereus B4264]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|149925705|ref|ZP_01913969.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Limnobacter sp. MED105]
 gi|149825822|gb|EDM85030.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Limnobacter sp. MED105]
          Length = 302

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 41/169 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I F G+ G+GK+T  S  ++ L R+      T              + L      
Sbjct: 129 QKGKCIWFTGLSGSGKSTIASAFEQHLYRQG---MFT--------------MTLDGDNVR 171

Query: 62  FGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +       R++    V  V +  +  G ++L         ++     + + L  D
Sbjct: 172 HGLNKDLGFTETDRVENIRRVAEVSKLMVEAGLVVL--------VSFISPFRAERKLARD 223

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160
                +  +      + +D P++   +R          R  ++    +D
Sbjct: 224 L---FAPGDF---IEVFVDTPLEECERRDVKGLYAKARRGEIKNFTGID 266


>gi|121534120|ref|ZP_01665945.1| LAO/AO transport system ATPase [Thermosinus carboxydivorans Nor1]
 gi|121307223|gb|EAX48140.1| LAO/AO transport system ATPase [Thermosinus carboxydivorans Nor1]
          Length = 314

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 8/60 (13%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAAR--HVLLSCG 58
           I   G  GAGK+T    L +  +R+   V  V  +P     GG    +  R   + L  G
Sbjct: 48  IGITGPPGAGKSTLTDKLAKEYRRQGKTVGIVAVDPTSPFSGGAILGDRIRMNELTLDEG 107


>gi|114321806|ref|YP_743489.1| signal recognition particle-docking protein FtsY [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228200|gb|ABI57999.1| signal recognition particle-docking protein FtsY [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 389

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I  L R    +   V +    G T  A A   +      +     A+   
Sbjct: 186 GINGAGKTTTIGKLARRFGDQGKRVMLAA--GDTFRAAAVEQLQAWGERNNTPVIAQH-- 241

Query: 71  FAAARLDHVENVIRPALMEGKILL 94
             A     V +  + A   G  +L
Sbjct: 242 TGADAASVVFDGWQAAKARGSDVL 265


>gi|121610109|ref|YP_997916.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gi|121554749|gb|ABM58898.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 358

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI F G  G GK+T + L+ 
Sbjct: 28 QGEFIVFVGPSGCGKSTLLRLIA 50


>gi|6322828|ref|NP_012901.1| Ura6p [Saccharomyces cerevisiae S288c]
 gi|137024|sp|P15700|UMPK_YEAST RecName: Full=Uridylate kinase; Short=UK; AltName: Full=Uridine
           monophosphate kinase; Short=UMP kinase
 gi|173138|gb|AAA35194.1| uridine monophosphokinase [Saccharomyces cerevisiae]
 gi|173150|gb|AAA35200.1| uridine monophosphate kinase [Saccharomyces cerevisiae]
 gi|386578|gb|AAB27365.1| UMP kinase [Saccharomyces cerevisiae, Peptide, 204 aa]
 gi|486019|emb|CAA81859.1| URA6 [Saccharomyces cerevisiae]
 gi|45270038|gb|AAS56400.1| YKL024C [Saccharomyces cerevisiae]
 gi|285813233|tpg|DAA09130.1| TPA: Ura6p [Saccharomyces cerevisiae S288c]
          Length = 204

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 44/214 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L +      L      +   +   G+   E  ++ +      +   +
Sbjct: 23  GGPGAGKGTQCEKLVKDYSFVHLSA-GDLLRAEQGRAGSQYGELIKNCIKEG---QIVPQ 78

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSS-YAYQGERDSSQHLFLDSLQEI 123
              +         + N I   +   K   L D F      A   ERD  +  F+      
Sbjct: 79  EITL-------ALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFI------ 125

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFL 178
                     +  D P DI L+R+  R   S R    ++  +++     E      + F 
Sbjct: 126 ----------LFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFE 175

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                   +   V    S + V  ++ + + + +
Sbjct: 176 T-----KSKVVRVRCDRSVEDVYKDVQDAIRDSL 204


>gi|23502784|ref|NP_698911.1| signal recognition particle-docking protein FtsY [Brucella suis
           1330]
 gi|62290788|ref|YP_222581.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 1 str. 9-941]
 gi|82700699|ref|YP_415273.1| GTP-binding signal recognition particle [Brucella melitensis biovar
           Abortus 2308]
 gi|254708922|ref|ZP_05170733.1| cell division protein FtsY [Brucella pinnipedialis B2/94]
 gi|256370336|ref|YP_003107847.1| signal recognition particle-docking protein FtsY [Brucella microti
           CCM 4915]
 gi|260546052|ref|ZP_05821792.1| cell division protein FtsY [Brucella abortus NCTC 8038]
 gi|260758838|ref|ZP_05871186.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 4 str. 292]
 gi|260760562|ref|ZP_05872905.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|261315022|ref|ZP_05954219.1| signal recognition particle-docking protein FtsY [Brucella
           pinnipedialis M163/99/10]
 gi|261321389|ref|ZP_05960586.1| signal recognition particle-docking protein FtsY [Brucella ceti
           M644/93/1]
 gi|261751083|ref|ZP_05994792.1| signal recognition particle-docking protein FtsY [Brucella suis bv.
           5 str. 513]
 gi|297247175|ref|ZP_06930893.1| signal recognition particle receptor [Brucella abortus bv. 5 str.
           B3196]
 gi|23348805|gb|AAN30826.1| signal recognition particle-docking protein FtsY [Brucella suis
           1330]
 gi|62196920|gb|AAX75220.1| FtsY, signal recognition particle-docking protein [Brucella abortus
           bv. 1 str. 9-941]
 gi|82616800|emb|CAJ11890.1| GTP-binding signal recognition particle (SRP54)
           G-domain:ATP/GTP-binding site motif A (P-loop):AAA
           ATPase:Cell division trans [Brucella melitensis biovar
           Abortus 2308]
 gi|256000499|gb|ACU48898.1| signal recognition particle-docking protein FtsY [Brucella microti
           CCM 4915]
 gi|260096159|gb|EEW80035.1| cell division protein FtsY [Brucella abortus NCTC 8038]
 gi|260669156|gb|EEX56096.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 4 str. 292]
 gi|260670994|gb|EEX57815.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|261294079|gb|EEX97575.1| signal recognition particle-docking protein FtsY [Brucella ceti
           M644/93/1]
 gi|261304048|gb|EEY07545.1| signal recognition particle-docking protein FtsY [Brucella
           pinnipedialis M163/99/10]
 gi|261740836|gb|EEY28762.1| signal recognition particle-docking protein FtsY [Brucella suis bv.
           5 str. 513]
 gi|297174344|gb|EFH33691.1| signal recognition particle receptor [Brucella abortus bv. 5 str.
           B3196]
          Length = 463

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 267 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 322

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 323 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 368


>gi|154246431|ref|YP_001417389.1| arginine/ornithine transport system ATPase [Xanthobacter
           autotrophicus Py2]
 gi|154160516|gb|ABS67732.1| LAO/AO transport system ATPase [Xanthobacter autotrophicus Py2]
          Length = 328

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 2   NSGLF---ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
             G F   I+  G+ G GK+T I  L  +L ++ + V  +  +P  T    + 
Sbjct: 52  TGGAFRVGIT--GVPGVGKSTTIDALGTYLTQQGHKVAVLAVDPSSTRTGGSI 102


>gi|15599638|ref|NP_253132.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Pseudomonas aeruginosa PAO1]
 gi|116052474|ref|YP_792787.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296391152|ref|ZP_06880627.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Pseudomonas aeruginosa PAb1]
 gi|7387611|sp|O50274|CYSNC_PSEAE RecName: Full=Bifunctional enzyme CysN/CysC; Includes: RecName:
           Full=Sulfate adenylyltransferase subunit 1; AltName:
           Full=ATP-sulfurylase large subunit; AltName:
           Full=Sulfate adenylate transferase; Short=SAT; Includes:
           RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase
 gi|9950676|gb|AAG07830.1|AE004858_8 ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa PAO1]
 gi|2665722|gb|AAC46387.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa PAO1]
 gi|115587695|gb|ABJ13710.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 633

 Score = 35.8 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 34/151 (22%)

Query: 2   NSGLF------ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
            +G F      + F G+ GAGK+T    ++R L      V+V          +  RH L 
Sbjct: 457 RAGRFGQQPATVLFSGLSGAGKSTLAYAVERKLFDMGRAVYVL-------DGQNLRHDLN 509

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +     E  +    R  HV    +     G I LC     +  A   E       
Sbjct: 510 KGLPQDRAGRTENWL----RTAHVA---KQFNEAGLISLC-----AFVAPSAEGREQARA 557

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + + + +         T+ +     +  +R
Sbjct: 558 LIGA-ERL--------ITVYVQASPQVCRER 579


>gi|329120942|ref|ZP_08249573.1| guanylate kinase [Dialister micraerophilus DSM 19965]
 gi|327471104|gb|EGF16558.1| guanylate kinase [Dialister micraerophilus DSM 19965]
          Length = 219

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 62/175 (35%), Gaps = 32/175 (18%)

Query: 1   MNS----GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLL 55
           MN+    G+ +   G  GAGK T    +++      Y V   TR P      +   +   
Sbjct: 6   MNNKKDEGILLVVSGPSGAGKGTICDEIRKMNPDLFYSVSMTTRSPRKNE-KDGINYYFR 64

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIR----PALMEGKILLCDRFLDSSYAYQGERDS 111
           S    E   + +A +  A   D+    ++      L +GK +L +  +D   A Q +   
Sbjct: 65  SVEEFEKLIKEDAFLEYARVYDNYYGTLKQNTFDLLKQGKSILLE--IDIQGAMQVKERY 122

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER 164
            + +F                 I + +P   +I  +R+  R +  E +      +
Sbjct: 123 PKGVF-----------------IYI-VPPSLEILSERIHKRGTDSEESIRKRLSQ 159


>gi|326942572|gb|AEA18468.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar chinensis CT-43]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 33 GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 85


>gi|306842917|ref|ZP_07475553.1| signal recognition particle-docking protein FtsY [Brucella sp. BO2]
 gi|306286940|gb|EFM58460.1| signal recognition particle-docking protein FtsY [Brucella sp. BO2]
          Length = 470

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 274 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 329

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 330 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 375


>gi|261820293|ref|YP_003258399.1| ABC transporter [Pectobacterium wasabiae WPP163]
 gi|261604306|gb|ACX86792.1| ABC transporter related protein [Pectobacterium wasabiae WPP163]
          Length = 361

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +NSG F+ F G  G GK+T + ++ 
Sbjct: 26 INSGEFVVFVGPSGCGKSTLLRMIA 50


>gi|256059908|ref|ZP_05450094.1| GTP-binding signal recognition particle [Brucella neotomae 5K33]
 gi|261323880|ref|ZP_05963077.1| signal recognition particle-docking protein FtsY [Brucella neotomae
           5K33]
 gi|261299860|gb|EEY03357.1| signal recognition particle-docking protein FtsY [Brucella neotomae
           5K33]
          Length = 465

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 269 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 324

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 325 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 370


>gi|294952735|ref|XP_002787438.1| signal recognition particle receptor alpha subunit, putative
           [Perkinsus marinus ATCC 50983]
 gi|239902410|gb|EER19234.1| signal recognition particle receptor alpha subunit, putative
           [Perkinsus marinus ATCC 50983]
          Length = 882

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKN 32
           I F G+ G GK+T++S +  +L++K 
Sbjct: 400 IVFLGVNGVGKSTNLSKVAYYLRKKG 425


>gi|228961058|ref|ZP_04122685.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          pakistani str. T13001]
 gi|229152989|ref|ZP_04281170.1| ABC transporter-related protein [Bacillus cereus m1550]
 gi|228630409|gb|EEK87057.1| ABC transporter-related protein [Bacillus cereus m1550]
 gi|228798603|gb|EEM45589.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          pakistani str. T13001]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 33 GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 85


>gi|225628133|ref|ZP_03786168.1| signal recognition particle-docking protein FtsY [Brucella ceti
           str. Cudo]
 gi|260169358|ref|ZP_05756169.1| signal recognition particle-docking protein FtsY [Brucella sp.
           F5/99]
 gi|261758876|ref|ZP_06002585.1| cell division protein FtsY [Brucella sp. F5/99]
 gi|225616958|gb|EEH14005.1| signal recognition particle-docking protein FtsY [Brucella ceti
           str. Cudo]
 gi|261738860|gb|EEY26856.1| cell division protein FtsY [Brucella sp. F5/99]
          Length = 465

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 269 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 324

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 325 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 370


>gi|218893533|ref|YP_002442402.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Pseudomonas aeruginosa LESB58]
 gi|218773761|emb|CAW29575.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa LESB58]
          Length = 633

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 34/151 (22%)

Query: 2   NSGLF------ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
            +G F      + F G+ GAGK+T    ++R L      V+V          +  RH L 
Sbjct: 457 RAGRFGQQPATVLFSGLSGAGKSTLAYAVERKLFDMGRAVYVL-------DGQNLRHDLN 509

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +     E  +    R  HV    +     G I LC     +  A   E       
Sbjct: 510 KGLPQDRAGRTENWL----RTAHVA---KQFNEAGLISLC-----AFVAPSAEGREQARA 557

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + + + +         T+ +     +  +R
Sbjct: 558 LIGA-ERL--------ITVYVQASPQVCRER 579


>gi|207724634|ref|YP_002255031.1| kinase protein [Ralstonia solanacearum MolK2]
 gi|207739294|ref|YP_002257687.1| kinase protein [Ralstonia solanacearum IPO1609]
 gi|206589857|emb|CAQ36818.1| putative kinase protein [Ralstonia solanacearum MolK2]
 gi|206592668|emb|CAQ59574.1| putative kinase protein [Ralstonia solanacearum IPO1609]
          Length = 193

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQR 30
          + I+F G+ G GKTT   +L R L  
Sbjct: 20 MLIAFGGLPGTGKTTVAQILARRLAA 45


>gi|209550692|ref|YP_002282609.1| glycerol-3-phosphate transporter ATP-binding subunit [Rhizobium
          leguminosarum bv. trifolii WSM2304]
 gi|209536448|gb|ACI56383.1| ABC transporter related [Rhizobium leguminosarum bv. trifolii
          WSM2304]
          Length = 369

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI   G  G GK+T + ++ 
Sbjct: 26 IQSGEFIVILGPSGCGKSTLLRMIA 50


>gi|154304083|ref|XP_001552447.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150854312|gb|EDN29504.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 205

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 31/150 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I F G+  +GK+T  + L++ L    +  +                  L      
Sbjct: 22  QRGFTIWFTGLSASGKSTIATALEQHLLHLGHAAYR-----------------LDGDNVR 64

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118
           FG   +      +R +++  +   A +         F DS + A         +      
Sbjct: 65  FGLNKDLGFDEKSRNENIRRIAEVAKL---------FADSCTIALTSFISPYKADRAVAR 115

Query: 119 SLQEISVQE--VMPDCTIILDLPVDIGLKR 146
            L E +      +P   + +D+PV+   KR
Sbjct: 116 ELHEKAANGDDAIPFIEVFIDIPVEEAEKR 145


>gi|148560595|ref|YP_001259756.1| cell division protein FtsY [Brucella ovis ATCC 25840]
 gi|163843957|ref|YP_001628361.1| signal recognition particle-docking protein FtsY [Brucella suis
           ATCC 23445]
 gi|189025002|ref|YP_001935770.1| cell division protein FtsY [Brucella abortus S19]
 gi|237816295|ref|ZP_04595288.1| signal recognition particle-docking protein FtsY [Brucella abortus
           str. 2308 A]
 gi|254690075|ref|ZP_05153329.1| GTP-binding signal recognition particle [Brucella abortus bv. 6
           str. 870]
 gi|254694563|ref|ZP_05156391.1| GTP-binding signal recognition particle [Brucella abortus bv. 3
           str. Tulya]
 gi|254696188|ref|ZP_05158016.1| GTP-binding signal recognition particle [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254700575|ref|ZP_05162403.1| GTP-binding signal recognition particle [Brucella suis bv. 5 str.
           513]
 gi|254704945|ref|ZP_05166773.1| GTP-binding signal recognition particle [Brucella suis bv. 3 str.
           686]
 gi|254707541|ref|ZP_05169369.1| GTP-binding signal recognition particle [Brucella pinnipedialis
           M163/99/10]
 gi|254713651|ref|ZP_05175462.1| GTP-binding signal recognition particle [Brucella ceti M644/93/1]
 gi|254715995|ref|ZP_05177806.1| GTP-binding signal recognition particle [Brucella ceti M13/05/1]
 gi|254731106|ref|ZP_05189684.1| GTP-binding signal recognition particle [Brucella abortus bv. 4
           str. 292]
 gi|256030448|ref|ZP_05444062.1| GTP-binding signal recognition particle [Brucella pinnipedialis
           M292/94/1]
 gi|256158432|ref|ZP_05456330.1| GTP-binding signal recognition particle [Brucella ceti M490/95/1]
 gi|256253852|ref|ZP_05459388.1| GTP-binding signal recognition particle [Brucella ceti B1/94]
 gi|256258328|ref|ZP_05463864.1| GTP-binding signal recognition particle [Brucella abortus bv. 9
           str. C68]
 gi|260755613|ref|ZP_05867961.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 6 str. 870]
 gi|260884639|ref|ZP_05896253.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 9 str. C68]
 gi|261214887|ref|ZP_05929168.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 3 str. Tulya]
 gi|261217763|ref|ZP_05932044.1| signal recognition particle-docking protein FtsY [Brucella ceti
           M13/05/1]
 gi|261220990|ref|ZP_05935271.1| signal recognition particle-docking protein FtsY [Brucella ceti
           B1/94]
 gi|261316421|ref|ZP_05955618.1| signal recognition particle-docking protein FtsY [Brucella
           pinnipedialis B2/94]
 gi|261755645|ref|ZP_05999354.1| signal recognition particle-docking protein FtsY [Brucella suis bv.
           3 str. 686]
 gi|265987492|ref|ZP_06100049.1| signal recognition particle-docking protein FtsY [Brucella
           pinnipedialis M292/94/1]
 gi|265996949|ref|ZP_06109506.1| signal recognition particle-docking protein FtsY [Brucella ceti
           M490/95/1]
 gi|294851176|ref|ZP_06791849.1| signal recognition particle receptor [Brucella sp. NVSL 07-0026]
 gi|148371852|gb|ABQ61831.1| cell division protein FtsY [Brucella ovis ATCC 25840]
 gi|163674680|gb|ABY38791.1| signal recognition particle-docking protein FtsY [Brucella suis
           ATCC 23445]
 gi|189020574|gb|ACD73296.1| cell division protein FtsY [Brucella abortus S19]
 gi|237788362|gb|EEP62577.1| signal recognition particle-docking protein FtsY [Brucella abortus
           str. 2308 A]
 gi|260675721|gb|EEX62542.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 6 str. 870]
 gi|260874167|gb|EEX81236.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 9 str. C68]
 gi|260916494|gb|EEX83355.1| signal recognition particle-docking protein FtsY [Brucella abortus
           bv. 3 str. Tulya]
 gi|260919574|gb|EEX86227.1| signal recognition particle-docking protein FtsY [Brucella ceti
           B1/94]
 gi|260922852|gb|EEX89420.1| signal recognition particle-docking protein FtsY [Brucella ceti
           M13/05/1]
 gi|261295644|gb|EEX99140.1| signal recognition particle-docking protein FtsY [Brucella
           pinnipedialis B2/94]
 gi|261745398|gb|EEY33324.1| signal recognition particle-docking protein FtsY [Brucella suis bv.
           3 str. 686]
 gi|262551417|gb|EEZ07407.1| signal recognition particle-docking protein FtsY [Brucella ceti
           M490/95/1]
 gi|264659689|gb|EEZ29950.1| signal recognition particle-docking protein FtsY [Brucella
           pinnipedialis M292/94/1]
 gi|294819765|gb|EFG36764.1| signal recognition particle receptor [Brucella sp. NVSL 07-0026]
          Length = 465

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 269 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 324

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 325 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 370


>gi|148987924|ref|ZP_01819387.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP6-BS73]
 gi|147926388|gb|EDK77461.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP6-BS73]
          Length = 408

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 99  GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 131


>gi|119472396|ref|ZP_01614514.1| cytidine monophosphate (CMP) kinase [Alteromonadales bacterium
          TW-7]
 gi|119444918|gb|EAW26216.1| cytidine monophosphate (CMP) kinase [Alteromonadales bacterium
          TW-7]
          Length = 43

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 3/30 (10%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          I+ +G  G+GK T   LL   L    +DV 
Sbjct: 9  ITVDGPSGSGKGTVCRLLADKL---GWDVL 35


>gi|107099973|ref|ZP_01363891.1| hypothetical protein PaerPA_01000994 [Pseudomonas aeruginosa PACS2]
 gi|313107026|ref|ZP_07793229.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa 39016]
 gi|310879731|gb|EFQ38325.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa 39016]
          Length = 633

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 34/151 (22%)

Query: 2   NSGLF------ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
            +G F      + F G+ GAGK+T    ++R L      V+V          +  RH L 
Sbjct: 457 RAGRFGQQPATVLFSGLSGAGKSTLAYAVERKLFDMGRAVYVL-------DGQNLRHDLN 509

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +     E  +    R  HV    +     G I LC     +  A   E       
Sbjct: 510 KGLPQDRAGRTENWL----RTAHVA---KQFNEAGLISLC-----AFVAPSAEGREQARA 557

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + + + +         T+ +     +  +R
Sbjct: 558 LIGA-ERL--------ITVYVQASPQVCRER 579


>gi|70730791|ref|YP_260532.1| hypothetical protein PFL_3428 [Pseudomonas fluorescens Pf-5]
 gi|68345090|gb|AAY92696.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 162

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 32/154 (20%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK+T    L        +   +  E             L     ++  + A+ ++ A  
Sbjct: 18  SGKSTLARQLAEA-----HGSVLISED----------QWLAGLYPEQIHSIADYLLHAQR 62

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD-CT 133
               +E ++   L  G  ++ D F  ++ A               L+ ++ Q   P    
Sbjct: 63  LASVLEPLVIAMLRAGTCVVLD-FPANTVA-----------QRTWLRALADQAGTPHQLH 110

Query: 134 IILDLPVDIGLKRVQNRYSLRE---SACLDYFER 164
           + LD+       R++ R  L +   +A  + FER
Sbjct: 111 V-LDVDEAQCKARLRERNRLGDHPFAASDEQFER 143


>gi|46199377|ref|YP_005044.1| excinuclease ABC subunit A [Thermus thermophilus HB27]
 gi|46197002|gb|AAS81417.1| excinuclease ABC subunit A [Thermus thermophilus HB27]
          Length = 952

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G  G+GK+T +  +L   L ++      T  PG   A E   H+
Sbjct: 636 GRFVAITGPSGSGKSTLVHDVLYAALAQRLMRAKTT--PGPYEALEGVEHL 684



 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 3  SGLFISFEGIEGAGKTTHI 21
           G FI   G+ G+GK+T  
Sbjct: 23 RGKFIVITGVSGSGKSTLA 41


>gi|15614197|ref|NP_242500.1| cytidylate kinase [Bacillus halodurans C-125]
 gi|12643235|sp|Q9RC80|KCY_BACHD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|10174251|dbj|BAB05353.1| cytidylate kinase [Bacillus halodurans C-125]
          Length = 222

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          M   + I+ +G  GAGK+T    + + L     D
Sbjct: 1  MKK-MNIAIDGPAGAGKSTVAKQVAQALSFLYID 33


>gi|90421641|ref|YP_530011.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
 gi|90103655|gb|ABD85692.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
          Length = 242

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 20/47 (42%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
          G F++  G  GAGKTT +  + R +          R+  G    E A
Sbjct: 36 GEFVTILGPNGAGKTTLLRAMTRLIASTGKVAFKGRDVTGLRTHELA 82


>gi|67920875|ref|ZP_00514394.1| Adenylylsulfate kinase [Crocosphaera watsonii WH 8501]
 gi|67856992|gb|EAM52232.1| Adenylylsulfate kinase [Crocosphaera watsonii WH 8501]
          Length = 181

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYD 34
          F G+ GAGKTT    L++ L+   Y 
Sbjct: 10 FTGLSGAGKTTITQALEKKLREAGYP 35


>gi|71017531|ref|XP_758996.1| hypothetical protein UM02849.1 [Ustilago maydis 521]
 gi|46098774|gb|EAK84007.1| hypothetical protein UM02849.1 [Ustilago maydis 521]
          Length = 239

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREP 41
          I   G  G GK+T +  L + F     + V H TR+P
Sbjct: 19 IVLSGPSGVGKSTLLKKLFQEFPNDFGFSVSHTTRDP 55


>gi|332110447|gb|EGJ10770.1| ABC transporter-like protein [Rubrivivax benzoatilyticus JA2]
          Length = 271

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 4/59 (6%)

Query: 11 GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAAR---HVLLSCGVDEFGAE 65
          G  GAGKTT + L+   L+      V    +P   P A   R    + L+         
Sbjct: 40 GPSGAGKTTLLQLIAAALRPSAGQVVLDGTDPWTLPRAALQRLRGRLFLAPQTPPLPPR 98


>gi|331002048|ref|ZP_08325568.1| hypothetical protein HMPREF0491_00430 [Lachnospiraceae oral taxon
          107 str. F0167]
 gi|330411844|gb|EGG91249.1| hypothetical protein HMPREF0491_00430 [Lachnospiraceae oral taxon
          107 str. F0167]
          Length = 224

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++  G  G+GK+T +++L 
Sbjct: 32 INKGEFVAIVGPSGSGKSTLLNMLA 56


>gi|312905878|ref|ZP_07764894.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
 gi|310628092|gb|EFQ11375.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512]
          Length = 732

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 243 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 282


>gi|309775786|ref|ZP_07670781.1| maltose/maltodextrin import ATP-binding protein MalK
          [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916463|gb|EFP62208.1| maltose/maltodextrin import ATP-binding protein MalK
          [Erysipelotrichaceae bacterium 3_1_53]
          Length = 376

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 6  FISFEGIEGAGKTTHISLLKRFL 28
          FI   G  G GKTT + L+  FL
Sbjct: 56 FIVLAGPSGCGKTTLLQLVAGFL 78


>gi|307944850|ref|ZP_07660188.1| ATP-binding transport protein SmoK [Roseibium sp. TrichSKD4]
 gi|307772064|gb|EFO31287.1| ATP-binding transport protein SmoK [Roseibium sp. TrichSKD4]
          Length = 348

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          ++ G FI F G  G GK+T + ++
Sbjct: 26 IDKGEFIVFVGPSGCGKSTLLRMI 49


>gi|307594480|ref|YP_003900797.1| daunorubicin resistance ABC transporter ATPase [Vulcanisaeta
           distributa DSM 14429]
 gi|307549681|gb|ADN49746.1| daunorubicin resistance ABC transporter ATPase subunit
           [Vulcanisaeta distributa DSM 14429]
          Length = 332

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 55/222 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQR-------KNYDVH----VTREPGGTPAAEAARHVLLSC 57
           F G  GAGKTT I +L    +          YDV       RE  G    E         
Sbjct: 35  FLGPNGAGKTTTIKMLTTVTRPTEGTAVVNGYDVIKQPAKVRESIGVVPQEY-------T 87

Query: 58  GVDEFGAEAEAIVFAA----------ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107
             ++       ++ AA           R   + +++  +         DR +++   Y G
Sbjct: 88  ADEDLTGWENLMLVAALYGIPKREAKERAAELLDLVELSYAA------DRKVET---YSG 138

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167
                  + +  +   ++        + LD    +GL   Q R ++ +       ++  +
Sbjct: 139 GMRRRLEIAMGLINRPAI--------LFLD-EPTLGLD-AQTRAAIWDYVYRLR-KQYGM 187

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNI 204
            I       +L+ A    +R  I+D     +  + + +   +
Sbjct: 188 TIFMTTH--YLEEADRYAERIAIIDHGKILAIGTPKELKERV 227


>gi|299535300|ref|ZP_07048623.1| spermidine/putrescine import ATP-binding protein [Lysinibacillus
          fusiformis ZC1]
 gi|298729282|gb|EFI69834.1| spermidine/putrescine import ATP-binding protein [Lysinibacillus
          fusiformis ZC1]
          Length = 333

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI+  G  G GK+T + ++ 
Sbjct: 26 IQKGEFITLLGPSGCGKSTILRIVA 50


>gi|283850604|ref|ZP_06367891.1| ABC transporter related protein [Desulfovibrio sp. FW1012B]
 gi|283573847|gb|EFC21820.1| ABC transporter related protein [Desulfovibrio sp. FW1012B]
          Length = 589

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T + LL R+ +    ++ +   P       + R +L            EA +
Sbjct: 381 GPTGAGKSTLVKLLLRYFEPTGGEITLDGVPLAAYTLRSYRGLLGYVSQ-------EAFL 433

Query: 71  FAAARLDHV 79
           F     +++
Sbjct: 434 FHGTVAENI 442


>gi|326315724|ref|YP_004233396.1| glycerol-3-phosphate-transporting ATPase [Acidovorax avenae
          subsp. avenae ATCC 19860]
 gi|323372560|gb|ADX44829.1| Glycerol-3-phosphate-transporting ATPase [Acidovorax avenae
          subsp. avenae ATCC 19860]
          Length = 347

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GK+T + L+ 
Sbjct: 26 IQQGEFIVFVGPSGCGKSTLLRLIA 50


>gi|302408086|ref|XP_003001878.1| DNA replication ATP-dependent helicase dna2 [Verticillium albo-atrum
            VaMs.102]
 gi|261359599|gb|EEY22027.1| DNA replication ATP-dependent helicase dna2 [Verticillium albo-atrum
            VaMs.102]
          Length = 1446

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 16/94 (17%)

Query: 11   GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-------- 62
            G+ G GKTT I+ + R L  +   V +T          A  ++LL    D          
Sbjct: 953  GMPGTGKTTTIAHIIRALVSQGKSVLLTSY-----THTAVDNILLKLKHDSIPVLRLGAP 1007

Query: 63   ---GAEAEAIVFAAARLDHVENVIRPALMEGKIL 93
                 E +     AA   H  + I+ A  +  I+
Sbjct: 1008 AKVHPEVQEFATLAAVPMHSFDEIKSAWHDPPIV 1041


>gi|260578550|ref|ZP_05846461.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603334|gb|EEW16600.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Corynebacterium jeikeium ATCC 43734]
          Length = 215

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 13/97 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEFGAE--- 65
           G  G+GKTT   LL       +  V +  EP   G     +   ++     D        
Sbjct: 34  GPSGSGKTTLAKLLSGRFLPDSGKVTIDGEPVVTGRDRRRSRIALVSQSPRDACNPRWTL 93

Query: 66  ----AEAIVFAAARLDHVENVIRPALMEG-KILLCDR 97
               AE ++ A    +H   VIR  + +  K  + DR
Sbjct: 94  REIIAEPLLIA---GEHNREVIRECVEDHTKRAMLDR 127


>gi|258651980|ref|YP_003201136.1| ABC transporter [Nakamurella multipartita DSM 44233]
 gi|258555205|gb|ACV78147.1| ABC transporter related [Nakamurella multipartita DSM 44233]
          Length = 306

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51
          F G  G+GKTT I +L   L+     V      GG P ++A R
Sbjct: 37 FLGPNGSGKTTTIRILLGLLKADGGRV---SMLGGDPWSDAVR 76


>gi|228955065|ref|ZP_04117080.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
 gi|229082040|ref|ZP_04214528.1| ABC transporter-related protein [Bacillus cereus Rock4-2]
 gi|228701265|gb|EEL53763.1| ABC transporter-related protein [Bacillus cereus Rock4-2]
 gi|228804575|gb|EEM51179.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          kurstaki str. T03a001]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|229112248|ref|ZP_04241788.1| ABC transporter-related protein [Bacillus cereus Rock1-15]
 gi|228671232|gb|EEL26536.1| ABC transporter-related protein [Bacillus cereus Rock1-15]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 33 GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 85


>gi|226360766|ref|YP_002778544.1| polyphosphate kinase 2 [Rhodococcus opacus B4]
 gi|226239251|dbj|BAH49599.1| polyphosphate kinase 2 [Rhodococcus opacus B4]
          Length = 314

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 89  IIFEGRDAAGKGGAIKRFTEHLNPRGARVVALEKPTERERTQW----------------- 131

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I++ DR   
Sbjct: 132 ----YFQRYVQHLP-------AGGEIVMMDRSWY 154


>gi|218889114|ref|YP_002437978.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           LESB58]
 gi|218769337|emb|CAW25097.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           LESB58]
          Length = 456

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 257 GVNGVGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNRIPVIAQH-- 312

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 313 TGADSASVIFDAVQAAKARGIDVLIAD 339


>gi|222110003|ref|YP_002552267.1| ABC transporter-like protein [Acidovorax ebreus TPSY]
 gi|221729447|gb|ACM32267.1| ABC transporter related [Acidovorax ebreus TPSY]
          Length = 335

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC 57
           G FI   G  G GK+T + ++    +           V    EP     A   ++  L  
Sbjct: 33  GEFIVIVGPSGCGKSTLLRMVAGLEEITGGTIAIGERVVNNLEPARRDIAMVFQNYALYP 92

Query: 58  GVDEFGAEAEAI 69
            +  F   A  +
Sbjct: 93  HMSVFDNMAYGL 104


>gi|212634435|ref|YP_002310960.1| adenylylsulfate kinase [Shewanella piezotolerans WP3]
 gi|212555919|gb|ACJ28373.1| Adenylylsulfate kinase [Shewanella piezotolerans WP3]
          Length = 214

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + + R L       +                 +L       G  A+ 
Sbjct: 41  FTGLSGSGKSTIANAVDRMLHNLGCTTY-----------------VLDGDNVRHGLNADL 83

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +  L  G I+        S A+     + + +  + L     
Sbjct: 84  NFSDVDRVENIRRIGEVSKLFLDAGLIV--------STAFISPFIADRAMVREQL--PEK 133

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           Q +     + +D P+++  +R
Sbjct: 134 QFIE----VFVDTPLEVCEQR 150


>gi|190893195|ref|YP_001979737.1| sn-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Rhizobium etli CIAT 652]
 gi|190698474|gb|ACE92559.1| sn-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Rhizobium etli CIAT 652]
          Length = 369

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI   G  G GK+T + ++ 
Sbjct: 26 IQSGEFIVILGPSGCGKSTLLRMIA 50


>gi|115488800|ref|NP_001066887.1| Os12g0515600 [Oryza sativa Japonica Group]
 gi|108862745|gb|ABA98706.2| guanylate kinase, putative, expressed [Oryza sativa Japonica Group]
 gi|113649394|dbj|BAF29906.1| Os12g0515600 [Oryza sativa Japonica Group]
 gi|124484329|dbj|BAF46275.1| guanylate kinase [Oryza sativa Japonica Group]
          Length = 382

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 54/168 (32%), Gaps = 37/168 (22%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I   G  G GK T I+ L K +  +  + V H TR P          H      ++E  +
Sbjct: 131 IVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTERSKIEEEIS 190

Query: 65  EAEAIVFAAARLDHVE--------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           E + + FA     HV           +     EGK  + D         QG   S +   
Sbjct: 191 EGKFLEFA-----HVHGNVYGTSVEAVESVTDEGKRCILD------IDVQGA-RSVRASS 238

Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           L+++              I   P   +   KR++ R +  E       
Sbjct: 239 LEAI-------------FIFVCPPSFEELEKRLRARGTETEEQIQKRL 273


>gi|107099358|ref|ZP_01363276.1| hypothetical protein PaerPA_01000370 [Pseudomonas aeruginosa PACS2]
          Length = 454

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 255 GVNGVGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNRIPVIAQH-- 310

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 311 TGADSASVIFDAVQAAKARGIDVLIAD 337


>gi|16262661|ref|NP_435454.1| ABC transporter, ATP-binding protein [Sinorhizobium meliloti
          1021]
 gi|14523282|gb|AAK64866.1| ABC transporter, ATP-binding protein [Sinorhizobium meliloti
          1021]
          Length = 377

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G F++  G  G+GKTT + ++ 
Sbjct: 43 KGRFLTILGPSGSGKTTLLRMIA 65


>gi|254237391|ref|ZP_04930714.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           C3719]
 gi|126169322|gb|EAZ54833.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           C3719]
          Length = 456

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 257 GVNGVGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNRIPVIAQH-- 312

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 313 TGADSASVIFDAVQAAKARGIDVLIAD 339


>gi|146296642|ref|YP_001180413.1| ABC transporter related [Caldicellulosiruptor saccharolyticus DSM
          8903]
 gi|145410218|gb|ABP67222.1| ABC transporter related protein [Caldicellulosiruptor
          saccharolyticus DSM 8903]
          Length = 279

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 12/70 (17%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G FI   G  G GK+T ++++   L++          P         R  +LS G D 
Sbjct: 30 QNGEFICILGPSGCGKSTLLNIIAG-LEK----------PTEGKVFLNGRE-VLSPGPDR 77

Query: 62 FGAEAEAIVF 71
               E+ +F
Sbjct: 78 VVMFQESALF 87


>gi|86150275|ref|ZP_01068502.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597592|ref|ZP_01100826.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter jejuni subsp. jejuni 84-25]
 gi|148926542|ref|ZP_01810224.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
          jejuni CG8486]
 gi|205356339|ref|ZP_03223104.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
          jejuni CG8421]
 gi|218562469|ref|YP_002344248.1| putative molybdopterin-guanine dinucleotide biosynthesis protein
          [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|85839391|gb|EAQ56653.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190184|gb|EAQ94159.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360175|emb|CAL34969.1| putative molybdopterin-guanine dinucleotide biosynthesis protein
          [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|145845236|gb|EDK22330.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
          jejuni CG8486]
 gi|205345724|gb|EDZ32362.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp.
          jejuni CG8421]
 gi|284926086|gb|ADC28438.1| molybdopterin-guanine dinucleotide biosynthesis protein MobB
          [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315926515|gb|EFV05897.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929373|gb|EFV08578.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter jejuni subsp. jejuni 305]
          Length = 163

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M   L I+F G   +GKTT I+ +     ++N  V + +
Sbjct: 1  MKQ-LIIAFSGPSNSGKTTLITKIADNFLQQNLKVLIIK 38


>gi|322375062|ref|ZP_08049576.1| excinuclease ABC, subunit A [Streptococcus sp. C300]
 gi|321280562|gb|EFX57601.1| excinuclease ABC, subunit A [Streptococcus sp. C300]
          Length = 468

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 159 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 191


>gi|307711070|ref|ZP_07647492.1| excinuclease ABC, A subunit [Streptococcus mitis SK321]
 gi|307617032|gb|EFN96210.1| excinuclease ABC, A subunit [Streptococcus mitis SK321]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|291413541|ref|XP_002723024.1| PREDICTED: adenylate kinase 1 [Oryctolagus cuniculus]
          Length = 194

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 64/225 (28%), Gaps = 50/225 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +     I   G  G+GK T               +            +  R  + S    
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCE-----------KIVHKYGYTHLSTGDLLRAEVSSGS-- 51

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQ----GERDSS 112
                        AR   +  +    + +G+++    + D   D+  A      G     
Sbjct: 52  -------------ARGKKLSEI----MEKGQLVPLETVLDMLRDAMVAKADTSKGFLIDG 94

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               +   +E   +   P   + +D   +   +R+  R     S  +D  E       +K
Sbjct: 95  YPREVQQGEEFERRIAQPTLLLYVDAGPETMKQRLLKRGET--SGRVDDNE----ETIKK 148

Query: 173 RRQIFLD-----IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
           R + +       IA  +       V++  S  +V + +   +  L
Sbjct: 149 RLETYYKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQVCTHLDAL 193


>gi|316935662|ref|YP_004110644.1| ABC transporter-like protein [Rhodopseudomonas palustris DX-1]
 gi|315603376|gb|ADU45911.1| ABC transporter related protein [Rhodopseudomonas palustris DX-1]
          Length = 261

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 21/55 (38%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          + G  ++  G  G GKTT  +++   L+     V V  EP  +        +   
Sbjct: 36 HRGEIVAIVGPSGCGKTTLFNIIAGLLEPTGGRVEVNGEPVHSATGHVGYMLQKD 90


>gi|281349450|gb|EFB25034.1| hypothetical protein PANDA_003186 [Ailuropoda melanoleuca]
          Length = 206

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 52/220 (23%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+   G  G+GK T    + +   +  Y    T         +  R  + S         
Sbjct: 24  FVV--GGPGSGKGTQCEKIVQ---KYGYTHLST--------GDLLRAEVSSGS------- 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAY----QGERDSSQHLFL 117
                   AR   +  +    + +G+++    + D   D+  A     +G         +
Sbjct: 64  --------ARGKMLSEI----MEKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREV 111

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              +E   +   P   + +D   +   +R+  R     S  +D  E       +KR + +
Sbjct: 112 QQGEEFERRIGQPTLLLYVDAGPETMTQRLLKRGET--SGRVDDNE----ETIKKRLETY 165

Query: 178 LD-----IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
                  IA  +       V++  S  SV T +   +  L
Sbjct: 166 YKATEPVIAFYEKRGIVRKVNAEGSVDSVFTQVCTHLDAL 205


>gi|317153126|ref|YP_004121174.1| adenylylsulfate kinase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943377|gb|ADU62428.1| adenylylsulfate kinase [Desulfovibrio aespoeensis Aspo-2]
          Length = 194

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 6/27 (22%), Positives = 15/27 (55%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G+ G+GK++    +   L+ +  +V +
Sbjct: 14 GLPGSGKSSLARGVAEHLRGRGVEVVL 40


>gi|257868427|ref|ZP_05648080.1| ABC-type polar amino acid transporter [Enterococcus gallinarum
          EG2]
 gi|257802591|gb|EEV31413.1| ABC-type polar amino acid transporter [Enterococcus gallinarum
          EG2]
          Length = 248

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 1/68 (1%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  +   G  G+GKTT +  L  FL+R +  V    E   T    + + +L        
Sbjct: 26 KGEVVVLLGPSGSGKTTFLRCL-NFLERADQGVIQLGETTTTLHKASKKEILTHQRQTAM 84

Query: 63 GAEAEAIV 70
            +  A+ 
Sbjct: 85 VFQNYALF 92


>gi|253687139|ref|YP_003016329.1| ABC transporter related [Pectobacterium carotovorum subsp.
          carotovorum PC1]
 gi|251753717|gb|ACT11793.1| ABC transporter related [Pectobacterium carotovorum subsp.
          carotovorum PC1]
          Length = 361

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +NSG F+ F G  G GK+T + ++ 
Sbjct: 26 INSGEFVVFVGPSGCGKSTLLRMIA 50


>gi|238752386|ref|ZP_04613864.1| Hemin import ATP-binding protein hmuV [Yersinia rohdei ATCC
          43380]
 gi|238709427|gb|EEQ01667.1| Hemin import ATP-binding protein hmuV [Yersinia rohdei ATCC
          43380]
          Length = 261

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          SG  ++  G  GAGK+T + LL  +L     + H+
Sbjct: 31 SGEMVAIIGPNGAGKSTLLRLLTGYLAPSGGECHL 65


>gi|229189883|ref|ZP_04316893.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 10876]
 gi|228593557|gb|EEK51366.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 10876]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|225575658|ref|ZP_03784268.1| hypothetical protein RUMHYD_03751 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037115|gb|EEG47361.1| hypothetical protein RUMHYD_03751 [Blautia hydrogenotrophica DSM
           10507]
          Length = 607

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           I+  G  GAGKTT ++LL RF +R    + +     GT   E  R  L
Sbjct: 399 IAIVGSTGAGKTTLVNLLMRFYERNGGKIFL----DGTDTTEMTRSNL 442


>gi|198431739|ref|XP_002124211.1| PREDICTED: similar to dynein heavy chain [Ciona intestinalis]
          Length = 4600

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 11   GIEGAGKTTHISLLK--RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-----FG 63
            G+ G+GKTT    +     L+     VH  R+  G    E  R+VL   G          
Sbjct: 2883 GVSGSGKTTLSRFVAWMNGLKVFQIKVH--RKYTGLEFDEDLRNVLRRSGCKGERIVFIM 2940

Query: 64   AEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---- 117
             E+  +   F       + N   P L EG          ++   Q +  + +   +    
Sbjct: 2941 DESNVLDSSFLERMNTLLANGEVPGLFEGD-------DYAALMTQCKEGAQREGLMLDSQ 2993

Query: 118  DSLQEISVQEVMPDCTIILDLPV-DIGLK-RVQNRYSLRESACLDYF 162
            + L +    EVM +  ++  +   + GLK R     +L     L++F
Sbjct: 2994 EELYKWFTGEVMKNLHVVFTMNPSEEGLKDRAATSPALFNRCVLNWF 3040


>gi|189014404|gb|ACD69438.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014406|gb|ACD69439.1| gualynate kinase-1 [Gryllus pennsylvanicus]
          Length = 199

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
          I   G  G+GK+T +  L      K  + V H TR+P
Sbjct: 9  IVVCGPSGSGKSTLLRRLFEEFPDKFGFSVSHTTRQP 45


>gi|159026624|emb|CAO86556.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 513

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL 28
           I+ +G  GAGK+T   L+   L
Sbjct: 288 IAIDGPAGAGKSTVTRLVAEKL 309


>gi|149176572|ref|ZP_01855185.1| cytidylate kinase [Planctomyces maris DSM 8797]
 gi|148844685|gb|EDL59035.1| cytidylate kinase [Planctomyces maris DSM 8797]
          Length = 220

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + ++ +G  G+GK+T    L   L
Sbjct: 1  MIVTIDGPAGSGKSTAAKGLADRL 24


>gi|113867232|ref|YP_725721.1| hypothetical protein H16_A1212 [Ralstonia eutropha H16]
 gi|113526008|emb|CAJ92353.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 370

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      +  +   V    +P      +                  
Sbjct: 159 IVFEGRDAAGKGGTIKRFMEHMNPRGARVVALEKPTEAERGQW----------------- 201

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 202 ----YFQRYVQHLP-------SAGEIVLFDRSWY 224


>gi|82617394|emb|CAI64305.1| conserved hypothetical protein [uncultured archaeon]
          Length = 614

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 6/77 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ ++  G  GAGK+T  + +  +L    + V     P      +       +    +
Sbjct: 267 QRGILVA--GPPGAGKSTFAAGVAIYLNDNGFVVKTMESPRDLQVPDEITQY--APLDGD 322

Query: 62  FGAEAEAIVFAAARLDH 78
               A+ ++    R DH
Sbjct: 323 MEKTADLLLLV--RPDH 337


>gi|39933799|ref|NP_946075.1| putative iron(III) dicitrate ABC transporter ATP-binding protein
          FecE [Rhodopseudomonas palustris CGA009]
 gi|39647646|emb|CAE26166.1| putative iron(III) dicitrate ABC transporter, ATP-binding
          component FecE [Rhodopseudomonas palustris CGA009]
          Length = 259

 Score = 35.8 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          +  G  ++  G  GAGKTT +  L   ++ + 
Sbjct: 28 LTRGHLVALVGPNGAGKTTLLRALAGLVEAQG 59


>gi|329894877|ref|ZP_08270676.1| arginine/ornithine transport system ATPase [gamma proteobacterium
           IMCC3088]
 gi|328922606|gb|EGG29941.1| arginine/ornithine transport system ATPase [gamma proteobacterium
           IMCC3088]
          Length = 318

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 6/94 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I   G+ G GK+T I     +L      V  +  +P     GG+   +  R  LLS   D
Sbjct: 51  IGISGVPGVGKSTFIEAFGLYLLSLGKKVAVLAVDPSSPIAGGSILGDKTRMELLSRSND 110

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94
            F   + A              +      G  ++
Sbjct: 111 AFIRPSPAGTALGGVAQKTRETMLLCEAAGYDVI 144


>gi|323966903|gb|EGB62332.1| adenylylsulfate kinase [Escherichia coli M863]
 gi|323978642|gb|EGB73724.1| adenylylsulfate kinase [Escherichia coli TW10509]
 gi|327251479|gb|EGE63165.1| adenylylsulfate kinase [Escherichia coli STEC_7v]
          Length = 201

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L       +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHNLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVEAGLVVLT 105


>gi|310658772|ref|YP_003936493.1| cytidylate kinase [Clostridium sticklandii DSM 519]
 gi|308825550|emb|CBH21588.1| cytidylate kinase [Clostridium sticklandii]
          Length = 220

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I+ +G  GAGK+T    +   L
Sbjct: 1  MIIAIDGPAGAGKSTIAKKVADSL 24


>gi|311280918|ref|YP_003943149.1| dephospho-CoA kinase [Enterobacter cloacae SCF1]
 gi|308750113|gb|ADO49865.1| dephospho-CoA kinase [Enterobacter cloacae SCF1]
          Length = 206

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 38/83 (45%), Gaps = 12/83 (14%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  +++D+  +  L+R   R ++ +         + ++  +  R   L +A +      +
Sbjct: 125 DRVLVVDVSRETQLRRTVQRDNVTKEHA------EQILAAQATRDARLAVADD------V 172

Query: 191 VDSAHSFQSVATNILNIVWELVQ 213
           +D+  +  ++A+++ ++    ++
Sbjct: 173 IDNNGTPDAIASDVAHLHTRYLK 195


>gi|307824688|ref|ZP_07654912.1| adenylylsulfate kinase [Methylobacter tundripaludum SV96]
 gi|307734342|gb|EFO05195.1| adenylylsulfate kinase [Methylobacter tundripaludum SV96]
          Length = 216

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 36/149 (24%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  + F G+ G+GK+T    ++  L  +                   R  +L      
Sbjct: 29  HRGAILWFTGLSGSGKSTLAHAVEEALHHRGC-----------------RTFVLDGDNVR 71

Query: 62  FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
            G   +    A  R +++  +    +  +  G I+L                S      +
Sbjct: 72  HGLCGDLGFSAQDRQENIRRIGEMAKIFMEAGIIVLT------------AFISPYCADRE 119

Query: 119 SLQEISVQEVMPDCT-IILDLPVDIGLKR 146
            ++ I  +    D   I  D P++I   R
Sbjct: 120 RVRGIVERG---DFIEIYCDTPIEICESR 145


>gi|307309127|ref|ZP_07588804.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
 gi|306900441|gb|EFN31056.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
          Length = 377

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G F++  G  G+GKTT + ++ 
Sbjct: 43 KGRFLTILGPSGSGKTTLLRMIA 65


>gi|301793464|emb|CBW35837.1| UvrABC system protein A (UvrA protein) [Streptococcus pneumoniae
           INV104]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|296875875|ref|ZP_06899936.1| excision endonuclease subunit UvrA [Streptococcus parasanguinis
           ATCC 15912]
 gi|296433116|gb|EFH18902.1| excision endonuclease subunit UvrA [Streptococcus parasanguinis
           ATCC 15912]
          Length = 941

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 13/67 (19%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLS 56
           G FI+  G+ G+GK+T I       + + L R       + +PG     +   H+  L+ 
Sbjct: 634 GKFIAVTGVSGSGKSTLINGILKKAIAQKLNRN------SEKPGKYKTIQGIEHIDRLID 687

Query: 57  CGVDEFG 63
                 G
Sbjct: 688 IDQSPIG 694


>gi|292492689|ref|YP_003528128.1| ABC transporter [Nitrosococcus halophilus Nc4]
 gi|291581284|gb|ADE15741.1| ABC transporter related protein [Nitrosococcus halophilus Nc4]
          Length = 259

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G  GAGKTT +  L R L  +     + R+ G     E AR +
Sbjct: 38 GPNGAGKTTLLKCLVRLLHGRGTIKLLARKIGDYSQKELARTL 80


>gi|283780395|ref|YP_003371150.1| adenylate kinase [Pirellula staleyi DSM 6068]
 gi|283438848|gb|ADB17290.1| adenylate kinase [Pirellula staleyi DSM 6068]
          Length = 196

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + I F G  GAGK T    L  +L
Sbjct: 1  MLIVFIGPPGAGKGTQSKRLLEYL 24


>gi|257876183|ref|ZP_05655836.1| signal recognition particle protein [Enterococcus casseliflavus
           EC20]
 gi|257810349|gb|EEV39169.1| signal recognition particle protein [Enterococcus casseliflavus
           EC20]
          Length = 430

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 1   MNSGL-FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           M SGL  I F G+ G GKTT I  L    + +   V +
Sbjct: 220 MQSGLTVILFVGVNGVGKTTSIGKLAHQFKAEGKKVLL 257


>gi|239943306|ref|ZP_04695243.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239989762|ref|ZP_04710426.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291446778|ref|ZP_06586168.1| ABC transport system ATP-binding protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349725|gb|EFE76629.1| ABC transport system ATP-binding protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 328

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 75/225 (33%), Gaps = 38/225 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI- 69
           G  GAGKTT + +L   L+   YD       G   A +  R         ++ A  E + 
Sbjct: 40  GPNGAGKTTAVRVLATLLR---YDAGRAEVAGLDVARDPRRVRSRIGLTGQYAAVDEGLT 96

Query: 70  ----VFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
               +    RL H+ N  RPA    G+  L DRF  +  A +  ++ S       L   S
Sbjct: 97  GRQNLEMFGRLFHLGN--RPARQRAGE--LLDRFGLTEAADKAAKEYSGG-MRRRLDLAS 151

Query: 125 VQEVMPDCTIILDLPVDIGLK-----------RVQNRYSLRESACLDYFERKD-VMIHEK 172
              + PD  + LD     GL            R              Y E  D +  H  
Sbjct: 152 SMILQPD-VLFLD-EPTTGLDPRSRGEVWEAVRALVAGGTTVLLTTQYLEEADRLASHIT 209

Query: 173 RRQIFLDIARNQP---------DRCHIVDSA-HSFQSVATNILNI 207
                  IA + P         DR  +V +     ++VA  +  +
Sbjct: 210 VIDRGRAIADDTPDALKNRVGGDRIEVVAAGPGDLEAVAKAVDRV 254


>gi|228907420|ref|ZP_04071278.1| ABC transporter ATP-binding protein [Bacillus thuringiensis IBL
          200]
 gi|228852281|gb|EEM97077.1| ABC transporter ATP-binding protein [Bacillus thuringiensis IBL
          200]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|228938900|ref|ZP_04101500.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|228971782|ref|ZP_04132403.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228978390|ref|ZP_04138767.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          Bt407]
 gi|228781407|gb|EEM29608.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          Bt407]
 gi|228787872|gb|EEM35830.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar thuringiensis str. T01001]
 gi|228820749|gb|EEM66774.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar berliner ATCC 10792]
 gi|326939400|gb|AEA15296.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          serovar chinensis CT-43]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229072290|ref|ZP_04205495.1| ABC transporter-related protein [Bacillus cereus F65185]
 gi|228710827|gb|EEL62797.1| ABC transporter-related protein [Bacillus cereus F65185]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|229109242|ref|ZP_04238841.1| ABC transporter ATP-binding protein [Bacillus cereus Rock1-15]
 gi|228674252|gb|EEL29497.1| ABC transporter ATP-binding protein [Bacillus cereus Rock1-15]
          Length = 322

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|229043542|ref|ZP_04191251.1| ABC transporter ATP-binding protein [Bacillus cereus AH676]
 gi|229144399|ref|ZP_04272804.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-ST24]
 gi|228639030|gb|EEK95455.1| ABC transporter ATP-binding protein [Bacillus cereus BDRD-ST24]
 gi|228725764|gb|EEL77012.1| ABC transporter ATP-binding protein [Bacillus cereus AH676]
          Length = 330

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G F +  G  G GKTT + ++ 
Sbjct: 25 MKQGEFTTLLGPSGCGKTTLLRMIA 49


>gi|237731282|ref|ZP_04561763.1| hemin importer ATP-binding subunit [Citrobacter sp. 30_2]
 gi|226906821|gb|EEH92739.1| hemin importer ATP-binding subunit [Citrobacter sp. 30_2]
          Length = 259

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARH 52
          +  G  ++  G  GAGK+T + LL  FL+      V   +     P    +RH
Sbjct: 27 LTKGELVALIGPNGAGKSTLLRLLTGFLKPATGRCVLAGKPLEEWPTQMLSRH 79


>gi|224043566|ref|XP_002197977.1| PREDICTED: similar to Cytoplasmic dynein 2 heavy chain 1 [Taeniopygia
            guttata]
          Length = 4266

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G GK+T   +LK  L +    V   +  P   P     RH LL     +    
Sbjct: 1936 VVIVGPSGGGKSTLWRMLKTALGKTGKVVKQYSMNPKAMP-----RHQLLGRIDMDTREW 1990

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            ++ ++  +AR      V+R        ++CD                   +++SL  +
Sbjct: 1991 SDGVLTNSAR-----QVVREPQDITSWIICD-------------GDIDPEWIESLNSV 2030


>gi|198274253|ref|ZP_03206785.1| hypothetical protein BACPLE_00393 [Bacteroides plebeius DSM
          17135]
 gi|198272928|gb|EDY97197.1| hypothetical protein BACPLE_00393 [Bacteroides plebeius DSM
          17135]
          Length = 203

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          GL I F G+ G+GK+T    L+R LQ++ 
Sbjct: 30 GLMIWFTGLSGSGKSTIAIALERELQQRG 58


>gi|182439503|ref|YP_001827222.1| putative iron-siderophore uptake ABC transporter ATP-binding
           protein [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178468019|dbj|BAG22539.1| putative iron-siderophore uptake ABC transporter ATP-binding
           protein [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 289

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 13/108 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHV-LLSCGVDEFG 63
           F    G    GK+T +  L R L+     V +  E     PA + AR + LL        
Sbjct: 54  FTVIVGPNACGKSTLLRALARMLKPSRGQVLLDGEAIHQLPAKKVARTLGLLPQSSIAPD 113

Query: 64  AEAEAIVFAAARLDHV----------ENVIRPALME-GKILLCDRFLD 100
               A + A  R  H           E V+  ++   G   L DR++D
Sbjct: 114 GITVADLVARGRYPHQGLLRQWSPEDERVVEESMESTGVAELADRYVD 161


>gi|171778754|ref|ZP_02919850.1| hypothetical protein STRINF_00702 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282711|gb|EDT48135.1| hypothetical protein STRINF_00702 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 212

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 34/174 (19%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ G GKTT+ SLL + L           EP            +L    ++     
Sbjct: 2   IILAGMIGVGKTTYTSLLAKEL---GTTAFF--EPVDNNP-------ILDKYYEDPEKYG 49

Query: 67  EAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQ----HL 115
            A+ ++   +       I+ A      +L DR  + D+ + Y    QG     +      
Sbjct: 50  FALQIYFLNKR---FKSIKEAYEADNNVL-DRSIYEDALFTYINTLQGSISDQEYNIYLE 105

Query: 116 FLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS-----LRESACLDYF 162
            LD++ E         PD  I L+   D  +  ++ R         E+   DY+
Sbjct: 106 LLDNMMEEIDGLPKKAPDLLIYLEGSFDHIMYNIKKRGRDFEQPDDENGLTDYY 159


>gi|188592130|ref|YP_001796728.1| ABC transporter ATP-binding protein [Cupriavidus taiwanensis LMG
           19424]
 gi|170938504|emb|CAP63491.1| Putative ABC transporter ATP-binding protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 550

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 44/147 (29%), Gaps = 34/147 (23%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE---AE 67
           G  G+GK+T + +L R LQ           P           + L   +          E
Sbjct: 385 GPNGSGKSTLLKVLARQLQ-----------PVAGTCRLLVEGIYLDQRLANLDPRRTVLE 433

Query: 68  AIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            ++ A   A   D    +    L  GKI           A  G   S       +L  + 
Sbjct: 434 QMLAANPTAREGDLRTRLAHLGLDSGKI-----------AVPGGSLSGGERLKAALACVL 482

Query: 125 VQEVMPDCTII------LDLPVDIGLK 145
             +  P   ++      LDLP    L+
Sbjct: 483 YADPPPQLLLLDEPSNHLDLPSAQALE 509


>gi|148240638|ref|YP_001226025.1| adenylylsulfate kinase [Synechococcus sp. WH 7803]
 gi|147849177|emb|CAK24728.1| Adenylylsulfate kinase [Synechococcus sp. WH 7803]
          Length = 207

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  + + + L  +    +                 +L       G   + 
Sbjct: 36  FTGLSGAGKSTLANAVNQALFERGLATY-----------------VLDGDNIRHGLCRDL 78

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  L  G I+L 
Sbjct: 79  GFSDADREENIRRIGEVAKLFLDSGVIVLT 108


>gi|311746686|ref|ZP_07720471.1| adenylyl-sulfate kinase [Algoriphagus sp. PR1]
 gi|126578359|gb|EAZ82523.1| adenylyl-sulfate kinase [Algoriphagus sp. PR1]
          Length = 197

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 34/145 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I F G+ G+GK+T  + ++  L    Y  +                 LL       G 
Sbjct: 26  KLIWFTGLSGSGKSTLANAVEVQLFEDGYMTY-----------------LLDGDNIRTGL 68

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +     + R++++     V +  +  G +++         A+       + +  + + 
Sbjct: 69  NKDLGFSDSDRIENIRRIAEVSKLMMDAGLLVVS--------AFISPFREEREMIAELVG 120

Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146
           + +         + +D P+++  +R
Sbjct: 121 KENF------LEVFVDCPIEVCEQR 139


>gi|125974256|ref|YP_001038166.1| ABC transporter related protein [Clostridium thermocellum ATCC
          27405]
 gi|281418310|ref|ZP_06249330.1| ABC transporter related protein [Clostridium thermocellum JW20]
 gi|125714481|gb|ABN52973.1| ABC transporter related protein [Clostridium thermocellum ATCC
          27405]
 gi|281409712|gb|EFB39970.1| ABC transporter related protein [Clostridium thermocellum JW20]
          Length = 266

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          M  G F    G  G+GKTT +  + R L+ +   ++V    G   +   AR +
Sbjct: 31 MEKGRFYGILGPNGSGKTTLLKSMARALRPQKGAIYV---NGEDISRMKAREL 80


>gi|123450215|ref|XP_001313732.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121895625|gb|EAY00803.1| hypothetical protein TVAG_231430 [Trichomonas vaginalis G3]
          Length = 135

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 7  ISFEGIEGAGKTTHIS--LLKRFLQRKNYDVHVTR 39
          +  EG  G+GKTT I   +L+  L      +  T+
Sbjct: 56 VIIEGQTGSGKTTQIPQFVLEEALSPYGKKIVCTQ 90


>gi|219847528|ref|YP_002461961.1| LAO/AO transport system ATPase [Chloroflexus aggregans DSM 9485]
 gi|219541787|gb|ACL23525.1| LAO/AO transport system ATPase [Chloroflexus aggregans DSM 9485]
          Length = 310

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGV 59
           G  GAGK+T ++ L +  +++   V  V  +P     GG    +  R   L    
Sbjct: 52  GPPGAGKSTLVTALAQEWRKRGVTVGIVAVDPSSPFSGGAVLGDRIRMQALGGDP 106


>gi|110597303|ref|ZP_01385591.1| dethiobiotin synthase [Chlorobium ferrooxidans DSM 13031]
 gi|110341139|gb|EAT59607.1| dethiobiotin synthase [Chlorobium ferrooxidans DSM 13031]
          Length = 226

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 3  SGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHV 37
           G  ++  GI+ G GKT    LL R LQ++  +V  
Sbjct: 4  KGAVVAISGIDTGIGKTYVTGLLARALQQQGREVIT 39


>gi|56609593|gb|AAW03326.1| CtaC [Cystobacter fuscus]
          Length = 1309

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
           +   +FL  A   P+R  ++D+  +       +     + +  R++ L ++ D
Sbjct: 511 RLDDLFLARAEQLPERVAVIDADRTLS--YAQLREHAAD-LATRLAALGARPD 560


>gi|57233890|ref|YP_182070.1| twitching mobility protein [Dehalococcoides ethenogenes 195]
 gi|57224338|gb|AAW39395.1| twitching mobility protein [Dehalococcoides ethenogenes 195]
          Length = 371

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 31/131 (23%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREP-------------------G 42
            GL I   G  G+GK+T ++ + + L   +N  V    +P                    
Sbjct: 124 RGLVIV-TGPTGSGKSTTLAAMIQHLNNTENKHVVTIEDPIEYVHPCIKCAVTQRQLGSD 182

Query: 43  GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102
                 A +HVL          E   +  AAA        +      G ++L      S 
Sbjct: 183 TLSFGHALKHVLRQNPDVIMVGEMRDLDTAAA--------VLTIAETGHLVLSTSHAPS- 233

Query: 103 YAYQGERDSSQ 113
            AYQ       
Sbjct: 234 -AYQALERIID 243


>gi|329998292|ref|ZP_08303033.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
 gi|328538772|gb|EGF64853.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
          Length = 357

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 9/49 (18%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTRE 40
          ++ G F+   G  G GK+T + LL           +L  +N      RE
Sbjct: 24 IHEGEFVVLVGPSGCGKSTLLRLLAGLEPVSEGQIWLHDENITAATPRE 72


>gi|328950603|ref|YP_004367938.1| Polyamine-transporting ATPase [Marinithermus hydrothermalis DSM
           14884]
 gi|328450927|gb|AEB11828.1| Polyamine-transporting ATPase [Marinithermus hydrothermalis DSM
           14884]
          Length = 346

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 7/88 (7%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GKTT +  +   L  + +  +    P   P     +H  L   +      A 
Sbjct: 24  VLLGPSGSGKTTLLKAIAGLLPARGHP-YAGLPPERRPVGYMPQHYALFPHLTALENVAF 82

Query: 68  AIVFA------AARLDHVENVIRPALME 89
            +         A  L+ +E V   AL E
Sbjct: 83  PLAHLPKSQRQARALERLEQVGLAALAE 110


>gi|327390610|gb|EGE88950.1| excinuclease ABC, A subunit [Streptococcus pneumoniae GA04375]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|320102384|ref|YP_004177975.1| sulfate adenylyltransferase; adenylylsulfate kinase [Isosphaera
           pallida ATCC 43644]
 gi|319749666|gb|ADV61426.1| sulfate adenylyltransferase; adenylylsulfate kinase [Isosphaera
           pallida ATCC 43644]
          Length = 581

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDV 35
           F G+ G+GK+T    L   L     + 
Sbjct: 409 FTGLSGSGKSTIAQALAERLAEFGRNA 435


>gi|313901456|ref|ZP_07834913.1| guanylate kinase [Thermaerobacter subterraneus DSM 13965]
 gi|313468284|gb|EFR63741.1| guanylate kinase [Thermaerobacter subterraneus DSM 13965]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 66/217 (30%), Gaps = 36/217 (16%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GL I      GAGK T    L++ L    Y V VT  P      +   +  +S    +  
Sbjct: 27  GLMIVLSAPSGAGKGTIRERLQKRLPGLVYAVSVTTRPRRPHEVDGVDYHFVSPEEFQRR 86

Query: 64  AEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            EA  +V  A    +        +   L EG+ ++C            E+D    L L  
Sbjct: 87  VEAGELVEWARVYGNYYGTPREPMETWLREGRDVIC------------EKDVQGALKL-- 132

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
                  ++ PD   I  +P  +     +      ES                    +  
Sbjct: 133 ------MDIYPDAVYIFAMPPSLEELERRLERRGTESEEARRQRLASADFEMACVDRYD- 185

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQKR 215
                     +V+        A +I+ I+  E ++ R
Sbjct: 186 --------YVVVN--DDPDRAADDIVAIIRAEKLRAR 212


>gi|302671393|ref|YP_003831353.1| cytidylate kinase Cmk [Butyrivibrio proteoclasticus B316]
 gi|302395866|gb|ADL34771.1| cytidylate kinase Cmk [Butyrivibrio proteoclasticus B316]
          Length = 220

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 49/236 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+ +G  GAGK+T   L+ + L    +    T            R + L    +    + 
Sbjct: 4   IAIDGPAGAGKSTIAKLVAKEL---GFVYVDT--------GAMYRAMALFMINNNVAPDD 52

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118
              +  +A     +  I+    E  + L D  ++           A     +      L 
Sbjct: 53  SDKI--SATCQDADITIKYENGEQVVFLNDENVNGKIRNEEVGKMASSSSANGDVRKKLV 110

Query: 119 SLQE-------ISVQE------VMPDCTI--ILDLPVDIGLKRVQNRYSLRESAC-LDYF 162
            LQ+       + +        V+PD T+   L     +  +R     + +   C +D  
Sbjct: 111 ELQQKLAKSTDVVMDGRDIGTVVLPDATLKVYLTASSRVRAERRFKELTAKGVECNIDVI 170

Query: 163 ERKDVMIHEKRRQIFLDIARNQP-----DRCHIVDSAH-SFQSVATNILNIVWELV 212
           E+  +      R  + D+ R        +   +VDS+  +   VA  I+++  E +
Sbjct: 171 EKDIID-----RD-YRDMHRENSPLMQAEDAVLVDSSDMTIDEVARRIVDLYKEKI 220


>gi|300788375|ref|YP_003768666.1| iron ABC transporter ATPase [Amycolatopsis mediterranei U32]
 gi|299797889|gb|ADJ48264.1| ATPase component of ABC-type Fe3+-siderophores transport system
          [Amycolatopsis mediterranei U32]
          Length = 256

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT 44
           G F++  G  G+GK+T +  + R L+ +   V +  E   T
Sbjct: 27 KGEFVAVVGPNGSGKSTLLKTVYRALRPRTGAVLLGAEDVWT 68


>gi|300710920|ref|YP_003736734.1| hypothetical protein HacjB3_07785 [Halalkalicoccus jeotgali B3]
 gi|299124603|gb|ADJ14942.1| hypothetical protein HacjB3_07785 [Halalkalicoccus jeotgali B3]
          Length = 494

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 12/113 (10%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           FI+  G  G+GK+   S++   L    Y V +    G     +    +L +   +E   +
Sbjct: 30  FIT--GKSGSGKSNTASVVVEELLEAGYPVLIVDTDGEYYGLKEEYELLHAGADEECDIQ 87

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCD--RFLDSSYAYQGERDSSQHLF 116
                      +H E V   AL +    + D   +LD + A    R++++HLF
Sbjct: 88  VGP--------EHAEKVAELALEQNVPTILDVSGYLDEAAANDLLRETARHLF 132


>gi|311111939|ref|YP_003983161.1| PPK2 family polyphosphate:nucleotide phosphotransferase [Rothia
           dentocariosa ATCC 17931]
 gi|310943433|gb|ADP39727.1| PPK2 family polyphosphate:nucleotide phosphotransferase [Rothia
           dentocariosa ATCC 17931]
          Length = 351

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 33/127 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG + AGK   I      L  +   V    +P      +                 
Sbjct: 123 LIIFEGRDAAGKGGSIKRFTEHLNPRGARVVALEKPTDIEQTQW---------------- 166

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + +  I+     G+I++ DR   S Y   G      +       E   
Sbjct: 167 ------------YFQRYIKHLPSGGEIVMMDR---SWYNRAGVERVMGYCTQAQYFEFMR 211

Query: 126 QEVMPDC 132
           +  +PD 
Sbjct: 212 E--VPDL 216


>gi|284045314|ref|YP_003395654.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283949535|gb|ADB52279.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 353

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++F G  G+GKTT + LL 
Sbjct: 24 IRRGEFVTFLGPSGSGKTTMLRLLA 48


>gi|300781109|ref|ZP_07090963.1| guanylate kinase [Corynebacterium genitalium ATCC 33030]
 gi|300532816|gb|EFK53877.1| guanylate kinase [Corynebacterium genitalium ATCC 33030]
          Length = 193

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 33/174 (18%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHV 53
           MN  G  +   G    GK+T +  L+  ++   + V   TR+P      G       R  
Sbjct: 1   MNGKGRLVVLAGPSAVGKSTIVRRLREAVEDLYFSVSMTTRDPRPGEVDGKDYFFVTREA 60

Query: 54  LLSC-GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
             +     E    AE       R       +R AL  G+ +L                  
Sbjct: 61  FQNRIDSGEMLEWAEIH-GGLQRSGTPAQPVREALAAGRPVLV----------------- 102

Query: 113 QHLFLDSLQEISVQEVMPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFE 163
             + L+  +  +++ +MP+  T+ L  P   ++ ++R+  R +  +       E
Sbjct: 103 -EVDLEGAR--NIKAIMPEAVTVFL-APPSWEVLVERLTGRATESDDVIARRLE 152


>gi|257866579|ref|ZP_05646232.1| signal recognition particle protein [Enterococcus casseliflavus
           EC30]
 gi|257872905|ref|ZP_05652558.1| signal recognition particle protein [Enterococcus casseliflavus
           EC10]
 gi|257800537|gb|EEV29565.1| signal recognition particle protein [Enterococcus casseliflavus
           EC30]
 gi|257807069|gb|EEV35891.1| signal recognition particle protein [Enterococcus casseliflavus
           EC10]
          Length = 429

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 1   MNSGL-FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           M SGL  I F G+ G GKTT I  L    + +   V +
Sbjct: 219 MQSGLTVILFVGVNGVGKTTSIGKLAHQFKAEGKKVLL 256


>gi|256962449|ref|ZP_05566620.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256952945|gb|EEU69577.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
          Length = 727

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 218 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 257


>gi|298502005|ref|YP_003723945.1| excision endonuclease subunit UvrA [Streptococcus pneumoniae
           TCH8431/19A]
 gi|298237600|gb|ADI68731.1| excision endonuclease subunit UvrA [Streptococcus pneumoniae
           TCH8431/19A]
          Length = 954

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|229825931|ref|ZP_04452000.1| hypothetical protein GCWU000182_01295 [Abiotrophia defectiva ATCC
           49176]
 gi|229789951|gb|EEP26065.1| hypothetical protein GCWU000182_01295 [Abiotrophia defectiva ATCC
           49176]
          Length = 600

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           I+  G  GAGKTT I+LL +F +     + +     GTP +E  R 
Sbjct: 392 IAVVGPTGAGKTTLINLLMKFYELNEGQIII----DGTPISELKRS 433


>gi|257066718|ref|YP_003152974.1| ABC transporter-like protein [Anaerococcus prevotii DSM 20548]
 gi|256798598|gb|ACV29253.1| ABC transporter related [Anaerococcus prevotii DSM 20548]
          Length = 370

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT ++++  F+++ + DV +
Sbjct: 34 KGKFYTLLGPSGCGKTTILNIIAGFVEQTSGDVFI 68


>gi|225855956|ref|YP_002737467.1| excinuclease ABC subunit A [Streptococcus pneumoniae P1031]
 gi|225725493|gb|ACO21345.1| excinuclease ABC, A subunit [Streptococcus pneumoniae P1031]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|261344299|ref|ZP_05971943.1| RTX toxin transporter [Providencia rustigianii DSM 4541]
 gi|282567903|gb|EFB73438.1| RTX toxin transporter [Providencia rustigianii DSM 4541]
          Length = 696

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVH 36
           + +G FI   G  G+GK+T   LL+R ++ +    + 
Sbjct: 482 IKAGEFIGITGPSGSGKSTLTKLLQRLYIPQHGQVIV 518


>gi|255657565|ref|ZP_05402974.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-23m63]
 gi|296452758|ref|ZP_06894448.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Clostridium difficile NAP08]
 gi|296879988|ref|ZP_06903958.1| ABC superfamily ATP binding cassette transporter ABC protein
          [Clostridium difficile NAP07]
 gi|296258448|gb|EFH05353.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Clostridium difficile NAP08]
 gi|296428965|gb|EFH14842.1| ABC superfamily ATP binding cassette transporter ABC protein
          [Clostridium difficile NAP07]
          Length = 242

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G  I   G  G GK+T   L+
Sbjct: 30 KGKLIVITGPNGGGKSTIAKLI 51


>gi|221368952|ref|YP_002520048.1| LAO/AO transport system ATPase [Rhodobacter sphaeroides KD131]
 gi|221162004|gb|ACM02975.1| LAO/AO transport system ATPase [Rhodobacter sphaeroides KD131]
          Length = 323

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAAR--HVLLSCG 58
           G+ G+GK+T +S L R L      V V          GG+   +  R   ++L   
Sbjct: 58  GVPGSGKSTMVSKLVRKLLDAGERVAVVAIDPSSPYSGGSILGDRIRMSDLVLDPN 113


>gi|192289221|ref|YP_001989826.1| ABC transporter [Rhodopseudomonas palustris TIE-1]
 gi|192282970|gb|ACE99350.1| ABC transporter related [Rhodopseudomonas palustris TIE-1]
          Length = 259

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          +  G  ++  G  GAGKTT +  L   ++ + 
Sbjct: 28 LTRGHLVALVGPNGAGKTTLLRALAGLVEAQG 59


>gi|156740867|ref|YP_001430996.1| cytidylate kinase [Roseiflexus castenholzii DSM 13941]
 gi|238686806|sp|A7NHN1|KCY_ROSCS RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|156232195|gb|ABU56978.1| cytidylate kinase [Roseiflexus castenholzii DSM 13941]
          Length = 232

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFL 28
          M++   I+ +G  GAGK+T   LL R L
Sbjct: 1  MSAPSVITIDGPAGAGKSTLGELLARRL 28


>gi|71909330|ref|YP_286917.1| signal recognition particle-docking protein FtsY [Dechloromonas
           aromatica RCB]
 gi|71848951|gb|AAZ48447.1| signal recognition particle-docking protein FtsY [Dechloromonas
           aromatica RCB]
          Length = 361

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +    I   G+ GAGKTT I  L ++ Q +   V +    G T  A A   +      + 
Sbjct: 159 HKPFVIMIAGVNGAGKTTSIGKLAKYFQTQGKSVLLAA--GDTFRAAAREQLETWGERNN 216

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96
               A+           V + I  A   G  I+L D
Sbjct: 217 VTVIAQD---NGDPAAVVFDAISAAKARGIDIVLAD 249


>gi|68535152|ref|YP_249857.1| putative ABC transport system, ATP-binding protein [Corynebacterium
           jeikeium K411]
 gi|68262751|emb|CAI36239.1| putative ABC transport system, ATP-binding protein [Corynebacterium
           jeikeium K411]
          Length = 310

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA---EAIV 70
           GAGKTT +  +   L+ K  +V +  +P      E    ++LS     + A+    + + 
Sbjct: 52  GAGKTTLLRTIAGQLRAKG-EVLIGGQPVYDNT-EVLNSLILSGPDVPWPADIKVKQLLS 109

Query: 71  FAAARLDHVENVIRPALMEGKIL 93
             AAR +  +      L E   +
Sbjct: 110 VVAARWETWDQRYADQLCEDFEV 132


>gi|254244745|ref|ZP_04938067.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa 2192]
 gi|126198123|gb|EAZ62186.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa 2192]
          Length = 633

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 34/151 (22%)

Query: 2   NSGLF------ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
            +G F      + F G+ GAGK+T    ++R L      V+V          +  RH L 
Sbjct: 457 RAGRFGQQPATVLFSGLSGAGKSTLAYAVERKLFDMGRAVYVL-------DGQNLRHDLN 509

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
                +     E  +    R  HV    +     G I LC     +  A   E       
Sbjct: 510 KGLPQDRAGRTENWL----RTAHVA---KQFNEAGLISLC-----AFVAPSAEGREQARA 557

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
            + + + +         T+ +     +  +R
Sbjct: 558 LIGA-ERL--------ITVYVQASPQVCRER 579


>gi|331268529|ref|YP_004395021.1| spermidine/putrescine ABC transporter ATP-binding subunit
          [Clostridium botulinum BKT015925]
 gi|329125079|gb|AEB75024.1| spermidine/putrescine ABC transporter ATP-binding subunit
          [Clostridium botulinum BKT015925]
          Length = 347

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          FI+  G  G GKTT + +L  F +    +V  
Sbjct: 33 FITLLGPSGCGKTTTLRILGGFEEATGGEVIF 64


>gi|329767053|ref|ZP_08258581.1| spermidine/putrescine import ATP-binding protein PotA [Gemella
          haemolysans M341]
 gi|328837778|gb|EGF87403.1| spermidine/putrescine import ATP-binding protein PotA [Gemella
          haemolysans M341]
          Length = 362

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GK+T + L+  FL   + DV +
Sbjct: 29 KGKFYTLLGPSGCGKSTILKLIGGFLSPTSGDVLL 63


>gi|325567236|ref|ZP_08143903.1| multidrug ABC superfamily ATP binding cassette transporter, ABC
           protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158669|gb|EGC70815.1| multidrug ABC superfamily ATP binding cassette transporter, ABC
           protein [Enterococcus casseliflavus ATCC 12755]
          Length = 626

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 14/107 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSC 57
            +G  ++  G  GAGKTT I+LL+RF       +      TR+            VL   
Sbjct: 409 KAGEMVAIVGPTGAGKTTLINLLERFYDVSGGSIRYDGRDTRDLTRDELRSNISMVLQDT 468

Query: 58  --------GVDEFGAE--AEAIVFAAARLDHVENVIRPALMEGKILL 94
                       +G E   +  V AAA+  HV++ +R        +L
Sbjct: 469 WLFTGSIYDNIHYGNEKATKEQVIAAAKAAHVDDFVRKLPEGYDTVL 515


>gi|325294603|ref|YP_004281117.1| signal recognition particle-docking protein FtsY
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065051|gb|ADY73058.1| signal recognition particle-docking protein FtsY
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 473

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ G GKTT I  L + L+ K Y V +    G T  A A   +
Sbjct: 275 GVNGVGKTTTIGKLAKQLKEKGYCVVLAA--GDTFRAAAIEQL 315


>gi|322390171|ref|ZP_08063703.1| excision endonuclease subunit UvrA [Streptococcus parasanguinis
           ATCC 903]
 gi|321143131|gb|EFX38577.1| excision endonuclease subunit UvrA [Streptococcus parasanguinis
           ATCC 903]
          Length = 941

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 13/67 (19%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLS 56
           G FI+  G+ G+GK+T I       + + L R       + +PG     +   H+  L+ 
Sbjct: 634 GKFIAVTGVSGSGKSTLINGILKKAIAQKLNRN------SEKPGKYKTIQGIEHIDRLID 687

Query: 57  CGVDEFG 63
                 G
Sbjct: 688 IDQSPIG 694


>gi|311064083|ref|YP_003970808.1| ABC transporter ATP-binding protein [Bifidobacterium bifidum
           PRL2010]
 gi|310866402|gb|ADP35771.1| ATP-binding protein of ABC transporter system [Bifidobacterium
           bifidum PRL2010]
          Length = 262

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 12/108 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT + LL       +  V +T   G T  + A +  L            E I 
Sbjct: 54  GLNGAGKTTLLKLLDGAFAATSGSVSITA--GETALSPAVKRDLKRIEDIVGRVRREEIP 111

Query: 71  FAAARLDHVENVIRPALMEGKILLCDR----------FLDSSYAYQGE 108
            +  R   +   I   L + K+   +R          F  S+ A Q  
Sbjct: 112 DSYYRAATIREAIEQPLKKHKVPESERLAIVGNLFAHFGLSTVARQSA 159


>gi|256959417|ref|ZP_05563588.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256949913|gb|EEU66545.1| conserved hypothetical protein [Enterococcus faecalis DS5]
          Length = 698

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 189 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 228


>gi|256003526|ref|ZP_05428516.1| ABC transporter related protein [Clostridium thermocellum DSM
          2360]
 gi|255992550|gb|EEU02642.1| ABC transporter related protein [Clostridium thermocellum DSM
          2360]
 gi|316941406|gb|ADU75440.1| ABC transporter related protein [Clostridium thermocellum DSM
          1313]
          Length = 266

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          M  G F    G  G+GKTT +  + R L+ +   ++V    G   +   AR +
Sbjct: 31 MEKGRFYGILGPNGSGKTTLLKSMARALRPQKGAIYV---NGEDISRMKAREL 80


>gi|256827118|ref|YP_003151077.1| cytidylate kinase [Cryptobacterium curtum DSM 15641]
 gi|256583261|gb|ACU94395.1| cytidylate kinase [Cryptobacterium curtum DSM 15641]
          Length = 223

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + ++ +G  GAGK+T    + R L
Sbjct: 1  MIVAIDGPSGAGKSTVAKAVARKL 24


>gi|229090948|ref|ZP_04222172.1| Branched-chain amino acid ABC transporter, ATP-binding protein
           [Bacillus cereus Rock3-42]
 gi|228692349|gb|EEL46084.1| Branched-chain amino acid ABC transporter, ATP-binding protein
           [Bacillus cereus Rock3-42]
          Length = 281

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
             G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 52  QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 102


>gi|296141355|ref|YP_003648598.1| hypothetical protein Tpau_3681 [Tsukamurella paurometabola DSM
           20162]
 gi|296029489|gb|ADG80259.1| protein of unknown function DUF344 [Tsukamurella paurometabola DSM
           20162]
          Length = 311

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      +  +   V    +P    A E          +D F    
Sbjct: 97  IVFEGRDAAGKGGTIKRFMEHMNPRGARVVALVKPTDREAGEW----YFQRYIDHFPTNG 152

Query: 67  EAIVF 71
           E ++F
Sbjct: 153 EIVLF 157


>gi|227432639|ref|ZP_03914615.1| excision endonuclease subunit UvrA [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|227351609|gb|EEJ41859.1| excision endonuclease subunit UvrA [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 952

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G+ G+GK+T +       LK+ L   +      R   GT   E    +
Sbjct: 639 GKFVAVTGVSGSGKSTLVNTVLKRALKQKLNNNSEKPGAYRSIEGTENIEQIVDI 693


>gi|219851208|ref|YP_002465640.1| signal recognition particle protein Srp54 [Methanosphaerula
           palustris E1-9c]
 gi|219545467|gb|ACL15917.1| GTP-binding signal recognition particle SRP54 G- domain protein
           [Methanosphaerula palustris E1-9c]
          Length = 440

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT  + L R+ QRK   V V       P A      L
Sbjct: 103 GLQGSGKTTTTAKLARYFQRKGLRVAVICGDTFRPGAYQQISTL 146


>gi|187778891|ref|ZP_02995364.1| hypothetical protein CLOSPO_02486 [Clostridium sporogenes ATCC
           15579]
 gi|187772516|gb|EDU36318.1| hypothetical protein CLOSPO_02486 [Clostridium sporogenes ATCC
           15579]
          Length = 209

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 46/216 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
             GL I   G  GAGK T     K  L++++  V     TR P          +  L+  
Sbjct: 3   KKGLLIVISGPSGAGKGTIC---KELLKKEDLWVSVSATTRSPRKGEENG-VHYFFLNED 58

Query: 59  VDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 E +  +  A    ++    ++ +   +  G  ++                    
Sbjct: 59  EFNERIEKDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVI-------------------- 98

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L +D    + V+E  P+   I  LP   +    R+ NR S      +  F          
Sbjct: 99  LEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRF---------- 148

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  + +I         +V+   + +     + +I+
Sbjct: 149 -KAAYKEINYVSKYNYAVVN--DTVEDAVNKVRSII 181


>gi|157737031|ref|YP_001489714.1| adenylate kinase [Arcobacter butzleri RM4018]
 gi|157698885|gb|ABV67045.1| adenylate kinase [Arcobacter butzleri RM4018]
          Length = 189

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 69/219 (31%), Gaps = 37/219 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56
           M     I   G  G+GKTT   L+        +    D+       G+   +     + +
Sbjct: 1   MKKLFLII--GAPGSGKTTDAELIASKYTNVTHYSTGDMFRAEVASGSQRGQIIDTYIKA 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +       E I+ A          I+ A  +  I++ D +  S    Q          
Sbjct: 59  GNIVPIDIAIETILMA----------IKNAPTD--IIVIDGYPRSIE--QMLELDKYLEK 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176
            D+++ ++             + V++  +  ++R   R     D  E  +  +  K  + 
Sbjct: 105 EDAVKLLNC------------IEVEVSEEVARDRVLGRSRGADDNIEVFNNRM--KVYKE 150

Query: 177 FLDIARN-QPDR--CHIVDSAHSFQSVATNILNIVWELV 212
            L+  +     R    I++   + + +   +   +   +
Sbjct: 151 PLEQIKEFYSKRGLLKIINGEGTIKEIVDEMDTFIQSRI 189


>gi|118468289|ref|YP_885294.1| polyphosphate kinase 2 [Mycobacterium smegmatis str. MC2 155]
 gi|118169576|gb|ABK70472.1| polyphosphate kinase 2 [Mycobacterium smegmatis str. MC2 155]
          Length = 283

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 21/65 (32%), Gaps = 4/65 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P                 V+   A  
Sbjct: 72  IVFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTERERT----QWYFQRYVEHLPAAG 127

Query: 67  EAIVF 71
           E ++F
Sbjct: 128 ELVLF 132


>gi|7107272|gb|AAF36350.1|AF186642_1 unknown [Sorghum bicolor]
          Length = 174

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 41/92 (44%), Gaps = 12/92 (13%)

Query: 14  GAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71
           G GKTT +  +   L+ KN+ V   +   P  + A++  + +L     ++         F
Sbjct: 1   GVGKTTLVRDVYETLEIKNHFVEQALATFPPYSSASDILKLILRDLKEED---------F 51

Query: 72  AAARLDHVENVIRPALM-EGKILLCDRFLDSS 102
             ++++  + ++   L  +  +++ D  + S+
Sbjct: 52  TLSKMEVTKELLDKKLKGKQYLVVIDGEVSST 83


>gi|81429014|ref|YP_396014.1| dephosphocoenzyme A kinase [Lactobacillus sakei subsp. sakei 23K]
 gi|109823921|sp|Q38VS6|COAE_LACSS RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|78610656|emb|CAI55707.1| Dephosphocoenzyme A kinase [Lactobacillus sakei subsp. sakei 23K]
          Length = 202

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 14/78 (17%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
             + L  PV+  L R+  R  L     L     +  +  ++ R  F            ++
Sbjct: 130 LVVYL--PVEKQLARLMARNQLSREDALKRINSQASLAEKRDRADF------------VI 175

Query: 192 DSAHSFQSVATNILNIVW 209
           D+  S   +   +  ++ 
Sbjct: 176 DNQGSLDQLKAQLKTVLE 193


>gi|157834086|pdb|1UKY|A Chain A, Substrate Specificity And Assembly Of Catalytic Center
           Derived From Two Structures Of Ligated Uridylate Kinase
 gi|157834087|pdb|1UKZ|A Chain A, Substrate Specificity And Assembly Of Catalytic Center
           Derived From Two Structures Of Ligated Uridylate Kinase
          Length = 203

 Score = 35.8 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 44/214 (20%)

Query: 11  GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK T    L +      L      +   +   G+   E  ++ +      +   +
Sbjct: 22  GGPGAGKGTQCEKLVKDYSFVHLSA-GDLLRAEQGRAGSQYGELIKNCIKEG---QIVPQ 77

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSS-YAYQGERDSSQHLFLDSLQEI 123
              +         + N I   +   K   L D F      A   ERD  +  F+      
Sbjct: 78  EITL-------ALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFI------ 124

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFL 178
                     +  D P DI L+R+  R   S R    ++  +++     E      + F 
Sbjct: 125 ----------LFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFE 174

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                   +   V    S + V  ++ + + + +
Sbjct: 175 T-----KSKVVRVRCDRSVEDVYKDVQDAIRDSL 203


>gi|322390681|ref|ZP_08064195.1| adenylate kinase [Streptococcus parasanguinis ATCC 903]
 gi|321142654|gb|EFX38118.1| adenylate kinase [Streptococcus parasanguinis ATCC 903]
          Length = 212

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 81/235 (34%), Gaps = 64/235 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T  + +       +               +  R  +      E G  A++ +
Sbjct: 7   GLPGAGKGTQAAKIVEEFHVAHI-----------STGDMFRAAM--ANQTEMGVLAKSFI 53

Query: 71  FAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-S 124
               + + V +     +++  L +  I               E+      F  ++++  +
Sbjct: 54  ---DKGELVPDDVTNGIVKERLAQDDI--------------KEKGFLLDGFPRTIEQAHA 96

Query: 125 VQEVMPDC------TIILDLPVDIGLKRVQNRYSLRESAC--------------LDYFER 164
           + +++ D        I +++     L+R+  R   RE+                 DY++R
Sbjct: 97  LDQILVDLGLELEGVINIEVDPSCLLERLSGRIIHRETGETFHKVFNPPADYKEEDYYQR 156

Query: 165 KDVMIHEKRRQIFLDIARNQP--------DRCHIVDSAHSFQSVATNILNIVWEL 211
           +D      +R++ ++IA+ +P           H ++       V  +I  ++  L
Sbjct: 157 EDDKPETVKRRLDVNIAQGEPILAHYRAKGLVHDIEGNQDINDVFKDIQKVLENL 211


>gi|320451045|ref|YP_004203141.1| excinuclease ABC subunit A [Thermus scotoductus SA-01]
 gi|320151214|gb|ADW22592.1| excinuclease ABC, subunit A [Thermus scotoductus SA-01]
          Length = 952

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G  G+GK+T I  +L   L +K      T  PG   + E   H+
Sbjct: 636 GRFVAVTGPSGSGKSTLIHDVLYAALAQKLMRAKTT--PGAYESLEGVEHL 684



 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 3  SGLFISFEGIEGAGKTTHI 21
           G FI   G+ G+GK+T  
Sbjct: 23 RGKFIVITGVSGSGKSTLA 41


>gi|315651741|ref|ZP_07904746.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Eubacterium saburreum DSM 3986]
 gi|315485996|gb|EFU76373.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Eubacterium saburreum DSM 3986]
          Length = 225

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G F++  G  G+GK+T +++L 
Sbjct: 33 INKGEFVAIVGPSGSGKSTLLNMLA 57


>gi|315424972|dbj|BAJ46647.1| ATPase [Candidatus Caldiarchaeum subterraneum]
          Length = 810

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ I+  G  G+GK+T  + L  F  R    V     P                   +F 
Sbjct: 470 GILIA--GPPGSGKSTFAASLAEFYSRMGKIVKTLESPRDLQVGPDITQY--GPLEGDFE 525

Query: 64  AEAEAIVF 71
             AE ++ 
Sbjct: 526 KTAEILLL 533


>gi|315055313|ref|XP_003177031.1| leptomycin B resistance protein pmd1 [Arthroderma gypseum CBS 118893]
 gi|311338877|gb|EFQ98079.1| leptomycin B resistance protein pmd1 [Arthroderma gypseum CBS 118893]
          Length = 1229

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRFL 28
            +  G +++  G  G+GK+T I LL+RF 
Sbjct: 1007 IRRGQYVALVGPSGSGKSTVIRLLERFF 1034


>gi|300742025|ref|ZP_07072046.1| polyphosphate kinase 2 [Rothia dentocariosa M567]
 gi|300381210|gb|EFJ77772.1| polyphosphate kinase 2 [Rothia dentocariosa M567]
          Length = 351

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 35/127 (27%), Gaps = 33/127 (25%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I FEG + AGK   I      L  +   V    +P      +                 
Sbjct: 123 LIIFEGRDAAGKGGSIKRFTEHLNPRGARVVALEKPTDIEQTQW---------------- 166

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                       + +  I+     G+I++ DR   S Y   G      +       E   
Sbjct: 167 ------------YFQRYIKHLPSGGEIVMMDR---SWYNRAGVERVMGYCTQAQYFEFMR 211

Query: 126 QEVMPDC 132
           +  +PD 
Sbjct: 212 E--VPDL 216


>gi|300868389|ref|ZP_07113014.1| ABC transporter ATP-binding protein [Oscillatoria sp. PCC 6506]
 gi|300333607|emb|CBN58202.1| ABC transporter ATP-binding protein [Oscillatoria sp. PCC 6506]
          Length = 898

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 2   NSGLFISFEGIEGAGKTTHISLL 24
            +G FI+  G  G+GK+T I LL
Sbjct: 688 KAGEFIALVGPSGSGKSTIIRLL 710


>gi|300114349|ref|YP_003760924.1| signal recognition particle-docking protein FtsY [Nitrosococcus
           watsonii C-113]
 gi|299540286|gb|ADJ28603.1| signal recognition particle-docking protein FtsY [Nitrosococcus
           watsonii C-113]
          Length = 352

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 16/153 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 140 GVNGVGKTTTIGKLAKKFQAEGRSVMLAA--GDTFRAAAVEQLQVWGERNQVPVMAQHG- 196

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128
             A     + + ++ A   G  +L         A    R  +Q   ++ L++I   + +V
Sbjct: 197 -GADSASVIFDAVQSAQARGIDVL--------IADTAGRLHTQINLMEELKKIKRVMGKV 247

Query: 129 MPDC--TIILDLPVDIGLKRVQNRYSLRESACL 159
            P     I+L +    G   +       E+  L
Sbjct: 248 NPHAPHEIMLTVDAGTGQNALNQAKQFHEAVGL 280


>gi|255715771|ref|XP_002554167.1| KLTH0E15796p [Lachancea thermotolerans]
 gi|238935549|emb|CAR23730.1| KLTH0E15796p [Lachancea thermotolerans]
          Length = 1247

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 12/93 (12%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDE 61
           SG  I+  G  G+GKTT +++L   + R        R  P     +       L+     
Sbjct: 45  SGSIIAIVGGSGSGKTTLLNVLASKVSRNLKKTGSFRFVPESPEHSGEITTAYLTQQDIL 104

Query: 62  FGAEA--EAIVFAAA---------RLDHVENVI 83
                  E + +A+          R   VE +I
Sbjct: 105 APKLTCRETLQYASDLKLRCSKNERRKLVEELI 137


>gi|238784438|ref|ZP_04628447.1| Shikimate kinase 2 [Yersinia bercovieri ATCC 43970]
 gi|238714607|gb|EEQ06610.1| Shikimate kinase 2 [Yersinia bercovieri ATCC 43970]
          Length = 168

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 8/81 (9%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
             I L    ++  +R+       +   L       + + +   R  ++ ++A       H
Sbjct: 90  LVIYLRASANVLAERLTEDPEDAQRPSLTGKPIVEEILDVLASREALYQEVAH------H 143

Query: 190 IVDSAHSFQSVATNILNIVWE 210
           ++D+    Q V  +IL I+ +
Sbjct: 144 VLDATQPLQEVVGHILQILAD 164


>gi|182683171|ref|YP_001834918.1| excinuclease ABC subunit A [Streptococcus pneumoniae CGSP14]
 gi|182628505|gb|ACB89453.1| excinuclease ABC subunit A [Streptococcus pneumoniae CGSP14]
          Length = 954

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|168493883|ref|ZP_02718026.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC3059-06]
 gi|221231096|ref|YP_002510248.1| UvrABC system protein A (UvrA protein) [Streptococcus pneumoniae
           ATCC 700669]
 gi|225858046|ref|YP_002739556.1| excinuclease ABC subunit A [Streptococcus pneumoniae 70585]
 gi|183576172|gb|EDT96700.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC3059-06]
 gi|220673556|emb|CAR68042.1| UvrABC system protein A (UvrA protein) [Streptococcus pneumoniae
           ATCC 700669]
 gi|225721416|gb|ACO17270.1| excinuclease ABC, A subunit [Streptococcus pneumoniae 70585]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|168492143|ref|ZP_02716286.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC0288-04]
 gi|183573606|gb|EDT94134.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC0288-04]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|118591228|ref|ZP_01548627.1| ATPase components of various ABC-type transport systems [Stappia
           aggregata IAM 12614]
 gi|118436304|gb|EAV42946.1| ATPase components of various ABC-type transport systems [Stappia
           aggregata IAM 12614]
          Length = 591

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLK 25
           M  G FI+  G  G GK+T +S++ 
Sbjct: 333 MKKGEFITLIGHSGCGKSTVLSMVA 357


>gi|153951669|ref|YP_001397727.1| guanylate kinase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939115|gb|ABS43856.1| putative guanylate kinase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 205

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 7/100 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  +   G  GAGK+T +  L    + + Y      TR+P          H + S    
Sbjct: 2   QGFVLLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGIHYHFI-SHEEF 60

Query: 61  EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
           + G +++  +  A   ++         + AL  GKI++ D
Sbjct: 61  QKGIDSDHFLEWAKVHENFYGTSLKHTQDALDNGKIVVFD 100


>gi|83644154|ref|YP_432589.1| sugar ABC transporter ATPase [Hahella chejuensis KCTC 2396]
 gi|83632197|gb|ABC28164.1| ABC-type sugar transport system, ATPase components [Hahella
          chejuensis KCTC 2396]
          Length = 368

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI F G  G GK+T + L+ 
Sbjct: 29 GEFIVFVGPSGCGKSTLLRLIA 50


>gi|70725700|ref|YP_252614.1| hypothetical protein SH0699 [Staphylococcus haemolyticus
          JCSC1435]
 gi|122064245|sp|Q4L8L7|HRTA_STAHJ RecName: Full=Putative hemin import ATP-binding protein HrtA
 gi|68446424|dbj|BAE04008.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 221

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          N G FI   G  G+GK+T +++L   L   + DV    E 
Sbjct: 30 NQGEFIILSGASGSGKSTLLNILGGLLSPSSGDVLYKGEN 69


>gi|29653652|ref|NP_819344.1| guanylate kinase [Coxiella burnetii RSA 493]
 gi|153208646|ref|ZP_01946898.1| guanylate kinase [Coxiella burnetii 'MSU Goat Q177']
 gi|154706891|ref|YP_001425112.1| guanylate kinase [Coxiella burnetii Dugway 5J108-111]
 gi|161830919|ref|YP_001596250.1| guanylate kinase [Coxiella burnetii RSA 331]
 gi|165919787|ref|ZP_02219530.1| guanylate kinase [Coxiella burnetii RSA 334]
 gi|212213190|ref|YP_002304126.1| guanylate kinase [Coxiella burnetii CbuG_Q212]
 gi|212218136|ref|YP_002304923.1| guanylate kinase [Coxiella burnetii CbuK_Q154]
 gi|45477121|sp|Q83EL7|KGUA_COXBU RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|29540914|gb|AAO89858.1| guanylate kinase [Coxiella burnetii RSA 493]
 gi|120575832|gb|EAX32456.1| guanylate kinase [Coxiella burnetii 'MSU Goat Q177']
 gi|154356177|gb|ABS77639.1| guanylate kinase [Coxiella burnetii Dugway 5J108-111]
 gi|161762786|gb|ABX78428.1| guanylate kinase [Coxiella burnetii RSA 331]
 gi|165916870|gb|EDR35474.1| guanylate kinase [Coxiella burnetii RSA 334]
 gi|212011600|gb|ACJ18981.1| guanylate kinase [Coxiella burnetii CbuG_Q212]
 gi|212012398|gb|ACJ19778.1| guanylate kinase [Coxiella burnetii CbuK_Q154]
          Length = 206

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 76/227 (33%), Gaps = 33/227 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN           GAGKT+ +  L + L      +  T  P      E   +  +     
Sbjct: 1   MNKANLFIISAPSGAGKTSLVRALVKALAEIKISISHTTRPKRPGDQEGVDYFFIDE--- 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS- 119
                 +A+V   A L+H     R    E   +L           Q +      L +D  
Sbjct: 58  ---TRFQAMVKEGAFLEHATIYERHYGTEKDWVL----------RQLKAGRDVLLEIDWQ 104

Query: 120 -LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDY--FERKDVMIHEK-- 172
             ++I  +   P  +I + LP   +   +R+  R     +         R+++  +++  
Sbjct: 105 GARQI-RELFPPALSIFI-LPPSIEALRERLIKRRQDDTAIIEQRLALAREEMAHYKEFD 162

Query: 173 ---RRQIFLDIARNQPDRCHIVDSAHSFQSVAT-NILNIVWELVQKR 215
                  F    +N     HI+ +    + V    +  ++ ELV+K+
Sbjct: 163 YLVVNDNFDQAVQNL---IHIISAERLQRDVQEKKLSRLLAELVEKQ 206


>gi|13476293|ref|NP_107863.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mesorhizobium loti MAFF303099]
 gi|14027054|dbj|BAB54008.1| nodulation protein NodQ, sulfate adenylate transferase, subunit 1
           [Mesorhizobium loti MAFF303099]
          Length = 645

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L ++ L       +                 +L       G   + 
Sbjct: 468 FTGLSGSGKSTIANLFEKKLFATGRHTY-----------------ILDGDNVRHGLNRDL 510

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +     G I++      S  +            +   + I  
Sbjct: 511 GFTDADRVENIRRVAEVAKLMADAGLIVIV-----SFISPFSAERRMARELMADGEFIE- 564

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D P +   +R
Sbjct: 565 --------VFVDTPFEECARR 577


>gi|89097936|ref|ZP_01170823.1| ABC transporter (ATP-binding protein) [Bacillus sp. NRRL B-14911]
 gi|89087438|gb|EAR66552.1| ABC transporter (ATP-binding protein) [Bacillus sp. NRRL B-14911]
          Length = 262

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FIS  G  G GK+T ++++ 
Sbjct: 32 KGQFISILGPSGCGKSTLLNIVA 54


>gi|238789411|ref|ZP_04633197.1| Cell division protein ftsY [Yersinia frederiksenii ATCC 33641]
 gi|238722554|gb|EEQ14208.1| Cell division protein ftsY [Yersinia frederiksenii ATCC 33641]
          Length = 520

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 323 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGDRNKIAVVAQH-- 378

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 379 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 424


>gi|94985508|ref|YP_604872.1| adenylylsulfate kinase [Deinococcus geothermalis DSM 11300]
 gi|166221085|sp|Q1IYI1|CYSC_DEIGD RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
          AltName: Full=ATP adenosine-5'-phosphosulfate
          3'-phosphotransferase; AltName:
          Full=Adenosine-5'-phosphosulfate kinase
 gi|94555789|gb|ABF45703.1| Adenylylsulfate kinase [Deinococcus geothermalis DSM 11300]
          Length = 181

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          +G  + F G+ GAGK+T  S L   L  +   V
Sbjct: 12 TGRVVWFTGLSGAGKSTLASALHAELTARGVAV 44


>gi|116493084|ref|YP_804819.1| ABC-type multidrug transport system, ATPase and permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103234|gb|ABJ68377.1| ABC-type multidrug transport system, ATPase and permease component
           [Pediococcus pentosaceus ATCC 25745]
          Length = 626

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSC-- 57
           G  ++  G  GAGKTT I+L++RF    +  V++    TR    T        VL     
Sbjct: 410 GEMVAIVGPTGAGKTTIINLIERFYDVNSGTVYLDGKDTRNMERTELRSKIAMVLQDTWL 469

Query: 58  ------GVDEFGAE--AEAIVFAAARLDHVENVIR 84
                    ++G E   +  ++ AA+  H ++ IR
Sbjct: 470 FTGTIRENIKYGREGATDEELYNAAKAAHADSFIR 504


>gi|51595117|ref|YP_069308.1| adenylylsulfate kinase [Yersinia pseudotuberculosis IP 32953]
 gi|108808770|ref|YP_652686.1| adenylylsulfate kinase [Yersinia pestis Antiqua]
 gi|108810894|ref|YP_646661.1| adenylylsulfate kinase [Yersinia pestis Nepal516]
 gi|145600253|ref|YP_001164329.1| adenylylsulfate kinase [Yersinia pestis Pestoides F]
 gi|153997592|ref|ZP_02022692.1| adenylylsulfate kinase [Yersinia pestis CA88-4125]
 gi|162419469|ref|YP_001605531.1| adenylylsulfate kinase [Yersinia pestis Angola]
 gi|165925667|ref|ZP_02221499.1| adenylylsulfate kinase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936669|ref|ZP_02225236.1| adenylylsulfate kinase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166010193|ref|ZP_02231091.1| adenylylsulfate kinase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214115|ref|ZP_02240150.1| adenylylsulfate kinase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398983|ref|ZP_02304507.1| adenylylsulfate kinase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421676|ref|ZP_02313429.1| adenylylsulfate kinase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423447|ref|ZP_02315200.1| adenylylsulfate kinase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218930382|ref|YP_002348257.1| adenylylsulfate kinase [Yersinia pestis CO92]
 gi|229838991|ref|ZP_04459150.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229896471|ref|ZP_04511639.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis Pestoides A]
 gi|229901107|ref|ZP_04516230.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis Nepal516]
 gi|294505072|ref|YP_003569134.1| adenylylsulfate kinase [Yersinia pestis Z176003]
 gi|24418357|sp|Q8ZBP3|CYSC_YERPE RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|51588399|emb|CAH20007.1| adenosine 5'-phosphosulfate kinase [Yersinia pseudotuberculosis IP
           32953]
 gi|108774542|gb|ABG17061.1| adenylylsulfate kinase [Yersinia pestis Nepal516]
 gi|108780683|gb|ABG14741.1| adenylylsulfate kinase [Yersinia pestis Antiqua]
 gi|115348993|emb|CAL21953.1| adenylylsulfate kinase [Yersinia pestis CO92]
 gi|145211949|gb|ABP41356.1| adenylylsulfate kinase [Yersinia pestis Pestoides F]
 gi|149289229|gb|EDM39309.1| adenylylsulfate kinase [Yersinia pestis CA88-4125]
 gi|162352284|gb|ABX86232.1| adenylylsulfate kinase [Yersinia pestis Angola]
 gi|165915318|gb|EDR33928.1| adenylylsulfate kinase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922279|gb|EDR39456.1| adenylylsulfate kinase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991100|gb|EDR43401.1| adenylylsulfate kinase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204746|gb|EDR49226.1| adenylylsulfate kinase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960595|gb|EDR56616.1| adenylylsulfate kinase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051487|gb|EDR62895.1| adenylylsulfate kinase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057617|gb|EDR67363.1| adenylylsulfate kinase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681832|gb|EEO77925.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis Nepal516]
 gi|229695357|gb|EEO85404.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229700545|gb|EEO88576.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis Pestoides A]
 gi|262363132|gb|ACY59853.1| adenylylsulfate kinase [Yersinia pestis D106004]
 gi|294355531|gb|ADE65872.1| adenylylsulfate kinase [Yersinia pestis Z176003]
 gi|320016559|gb|ADW00131.1| adenosine 5'-phosphosulfate kinase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 213

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 45  FTGLSGSGKSTLAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 87

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 88  GFSDADRRENIRRVGEVAKLMVDAGLVVLT 117


>gi|315646406|ref|ZP_07899524.1| cytidylate kinase [Paenibacillus vortex V453]
 gi|315278049|gb|EFU41369.1| cytidylate kinase [Paenibacillus vortex V453]
          Length = 226

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ 29
          I+ +G  GAGK+T   ++   LQ
Sbjct: 14 IAIDGPAGAGKSTVARMVASRLQ 36


>gi|294501453|ref|YP_003565153.1| aliphatic sulfonates ABC transporter ATP-binding protein SsuB
          [Bacillus megaterium QM B1551]
 gi|294351390|gb|ADE71719.1| aliphatic sulfonates ABC transporter, ATP-binding protein SsuB
          [Bacillus megaterium QM B1551]
          Length = 247

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI+  G  G GK+T + ++ 
Sbjct: 29 INKGEFITVIGPSGCGKSTLLKMIA 53


>gi|291542195|emb|CBL15305.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus
           bromii L2-63]
          Length = 469

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 18/24 (75%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++G+GKTTH + L + L+++  +
Sbjct: 108 GLQGSGKTTHTAKLAKMLKKQGRN 131


>gi|270262666|ref|ZP_06190937.1| transporter [Serratia odorifera 4Rx13]
 gi|270043350|gb|EFA16443.1| transporter [Serratia odorifera 4Rx13]
          Length = 275

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 21/39 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          +N G F++  G  G GK+T + ++   ++  +  + + R
Sbjct: 47 INQGEFVTLLGPSGCGKSTLLKMVAGLVEPSDGKLVLWR 85


>gi|228941969|ref|ZP_04104512.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          berliner ATCC 10792]
 gi|228974900|ref|ZP_04135461.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228981493|ref|ZP_04141790.1| ABC transporter-related protein [Bacillus thuringiensis Bt407]
 gi|228778172|gb|EEM26442.1| ABC transporter-related protein [Bacillus thuringiensis Bt407]
 gi|228784753|gb|EEM32771.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          thuringiensis str. T01001]
 gi|228817638|gb|EEM63720.1| ABC transporter-related protein [Bacillus thuringiensis serovar
          berliner ATCC 10792]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|224282765|ref|ZP_03646087.1| ATP binding protein of ABC transporter [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313139926|ref|ZP_07802119.1| ATP binding protein of ABC transporter [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313132436|gb|EFR50053.1| ATP binding protein of ABC transporter [Bifidobacterium bifidum
           NCIMB 41171]
          Length = 262

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 12/108 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT + LL       +  V +T   G T  + A +  L            E I 
Sbjct: 54  GLNGAGKTTLLKLLDGAFAATSGSVSITA--GETALSPAVKRDLKRIEDIVGRVRREEIP 111

Query: 71  FAAARLDHVENVIRPALMEGKILLCDR----------FLDSSYAYQGE 108
            +  R   +   I   L + K+   +R          F  S+ A Q  
Sbjct: 112 DSYYRAATIREAIEQPLKKHKVPESERLAIVGNLFAHFGLSTVARQSA 159


>gi|229918576|ref|YP_002887222.1| guanylate kinase [Exiguobacterium sp. AT1b]
 gi|229470005|gb|ACQ71777.1| guanylate kinase [Exiguobacterium sp. AT1b]
          Length = 207

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 62/175 (35%), Gaps = 34/175 (19%)

Query: 1   MN---SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDV-HVTREPGGTPAAEAARHVL 54
           MN    GL I   G  G GK T    L+   +  N  Y V   TR+P      E   +  
Sbjct: 1   MNFKERGLLIVLSGPSGVGKGTVCRALREE-EDNNLQYSVSATTRKPREGEV-EGVHYFF 58

Query: 55  LSCGVDEFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCDRFLDSSYAYQGERD 110
            S    E   E + ++  A  + +        +R  L  G+ ++ +         QG   
Sbjct: 59  KSREEFERMIEQKELLEHAEFVGNYYGTPVEWVRETLESGQDVILE------IEVQGA-- 110

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
                         V+E++P+   +   P    L+ ++NR   R +   +  +++
Sbjct: 111 ------------FQVKELLPEAVFLFLAPP--SLQELRNRLIGRGTESEEVIKQR 151


>gi|167469865|ref|ZP_02334569.1| adenylylsulfate kinase [Yersinia pestis FV-1]
          Length = 213

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  +    +                 LL       G   + 
Sbjct: 45  FTGLSGSGKSTLAGALEQALFARGVSTY-----------------LLDGDNVRHGLCRDL 87

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  +  G ++L 
Sbjct: 88  GFSDADRRENIRRVGEVAKLMVDAGLVVLT 117


>gi|166366813|ref|YP_001659086.1| hypothetical protein MAE_40720 [Microcystis aeruginosa NIES-843]
 gi|166089186|dbj|BAG03894.1| hypothetical protein MAE_40720 [Microcystis aeruginosa NIES-843]
          Length = 281

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL---KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
          M SG  +   G   AGKTT+++ L   K   Q K       + P     AE A ++L   
Sbjct: 1  MTSGNIVVI-GPTAAGKTTYLAALSYFKEHKQGKKLFTVNPQNPATRILAEKAENILKQA 59

Query: 58 GV 59
            
Sbjct: 60 AD 61


>gi|229582397|ref|YP_002840796.1| ABC transporter related [Sulfolobus islandicus Y.N.15.51]
 gi|228013113|gb|ACP48874.1| ABC transporter related [Sulfolobus islandicus Y.N.15.51]
          Length = 368

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F+   G  G GKTT + ++   L++    V++
Sbjct: 33 KGEFVVILGPTGEGKTTILKIIAGLLRQDKGHVYL 67


>gi|146343355|ref|YP_001208403.1| cyclic beta-1,2-glucan ABC transporter [Bradyrhizobium sp. ORS278]
 gi|146196161|emb|CAL80188.1| putative Beta-(1-->2)glucan export ATP-binding protein (Attachment
           protein)(chvA) [Bradyrhizobium sp. ORS278]
          Length = 596

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 21/92 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQR------------KNYDVHVTREPGGTPAAEA----- 49
           I+  G  GAGK+T I+LL R                +   +   R   G    EA     
Sbjct: 367 IALVGPTGAGKSTAIALLHRAFDPQSGFIKIDGMDVRGLKLATLRRNIGVVFQEALLFNR 426

Query: 50  -ARHVLLSCGVDEFGAEAEAIVFAAARLDHVE 80
             R  LL    D      E +  AAAR   +E
Sbjct: 427 SIRENLLVGKPDATD---EELRTAAARAQALE 455


>gi|121593281|ref|YP_985177.1| ABC transporter-like protein [Acidovorax sp. JS42]
 gi|120605361|gb|ABM41101.1| carbohydrate ABC transporter ATP-binding protein, CUT1 family
           [Acidovorax sp. JS42]
          Length = 335

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC 57
           G FI   G  G GK+T + ++    +           V    EP     A   ++  L  
Sbjct: 33  GEFIVIVGPSGCGKSTLLRMVAGLEEITGGTIAIGERVVNNLEPARRDIAMVFQNYALYP 92

Query: 58  GVDEFGAEAEAI 69
            +  F   A  +
Sbjct: 93  HMSVFDNMAYGL 104


>gi|152985353|ref|YP_001350350.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Pseudomonas aeruginosa PA7]
 gi|150960511|gb|ABR82536.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas
           aeruginosa PA7]
          Length = 632

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 28/138 (20%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    ++R L      V+V          +  RH L      +     E 
Sbjct: 469 FSGLSGAGKSTLAYAVERKLFDMGRAVYVL-------DGQNLRHDLNKGLPQDRAGRTEN 521

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
            +    R  HV    +     G I LC     +  A   E  +     + + + +     
Sbjct: 522 WL----RTAHVA---KQFNEAGLISLC-----AFVAPSAEGRAQARALIGA-ERL----- 563

Query: 129 MPDCTIILDLPVDIGLKR 146
               T+ +     +  +R
Sbjct: 564 ---ITVYVQASPQVCRER 578


>gi|90417268|ref|ZP_01225195.1| hypothetical protein GB2207_06074 [marine gamma proteobacterium
           HTCC2207]
 gi|90331044|gb|EAS46305.1| hypothetical protein GB2207_06074 [marine gamma proteobacterium
           HTCC2207]
          Length = 205

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 42/141 (29%), Gaps = 32/141 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    ++  L  +    +                  L       G     
Sbjct: 33  FTGLSGSGKSTVAVAVENALAARGQLCYR-----------------LDGDNVRLGINKNL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              A  R +++     + +  +  G I+L      S YA       +    +  + + S 
Sbjct: 76  GFSAEDRTENIRRIGEISKLFVDAGVIVLS--SFISPYA-------NDRDTVRRIHDESR 126

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D  ++    R
Sbjct: 127 YHF---IEIYVDCSLEAAESR 144


>gi|58221315|gb|AAW68300.1| regulatory protein PilA [Neisseria gonorrhoeae]
          Length = 140

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           GI GAGKTT I    ++ Q +   V +    G T  A A   +    G +     ++   
Sbjct: 52  GINGAGKTTSIGKFAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
                     + ++ A   G  I+L D
Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133


>gi|45190911|ref|NP_985165.1| AER309Wp [Ashbya gossypii ATCC 10895]
 gi|44983979|gb|AAS52989.1| AER309Wp [Ashbya gossypii ATCC 10895]
          Length = 185

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 7  ISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVT 38
          I   G  GAGK+T +  L   F +R  + V  T
Sbjct: 5  IVISGPSGAGKSTLLKKLFAEFPERFGFSVSST 37


>gi|194337804|ref|YP_002019598.1| dethiobiotin synthase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194310281|gb|ACF44981.1| dethiobiotin synthase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 225

 Score = 35.8 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 3  SGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHV 37
          SG  I+  GI+ G GKT    LL + L ++   V  
Sbjct: 2  SGTVIALSGIDTGIGKTYATGLLAKALLQQGIKVIT 37


>gi|330504407|ref|YP_004381276.1| ABC transporter-like protein [Pseudomonas mendocina NK-01]
 gi|328918693|gb|AEB59524.1| ABC transporter related protein [Pseudomonas mendocina NK-01]
          Length = 266

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 17/65 (26%)

Query: 3  SGLFISFEGIE---------------GAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPA 46
          +G  ++ EGI+               GAGKTT + LL   LQ  +     +   P   PA
Sbjct: 14 NGK-VALEGIDLTLAPGERVAIIGPSGAGKTTLLRLLATSLQPSRGEIDLLQHNPWRLPA 72

Query: 47 AEAAR 51
           +  R
Sbjct: 73 GKRQR 77


>gi|325295529|ref|YP_004282043.1| Adenylyl-sulfate kinase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065977|gb|ADY73984.1| Adenylyl-sulfate kinase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 199

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 21/94 (22%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           FI  F G+ G+GK+T    ++  L       +                 +L       G 
Sbjct: 26  FILWFTGLSGSGKSTLSHKVEEKLFEMGVHTY-----------------VLDGDNIRMGL 68

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
             +       R +++     V +  +  G ++L 
Sbjct: 69  NKDLGFTEEDRRENIRRIGEVAKLFVDAGIVVLT 102


>gi|323488023|ref|ZP_08093276.1| Iron(III)-transport ATP-binding protein sfuC [Planococcus
          donghaensis MPA1U2]
 gi|323398291|gb|EGA91084.1| Iron(III)-transport ATP-binding protein sfuC [Planococcus
          donghaensis MPA1U2]
          Length = 356

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI+  G  G GKTT + LL 
Sbjct: 27 GEFIAVLGPSGCGKTTLLKLLA 48


>gi|312977171|ref|ZP_07788919.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           CTV-05]
 gi|310895602|gb|EFQ44668.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           CTV-05]
          Length = 232

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 7   ISFEGIEGAGKTTHISLL----KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I+ EG  G+GK+T I  L    +  + + NY++  + +    P         L     ++
Sbjct: 74  IAIEGKNGSGKSTLIKYLLGISQNLIAKGNYELIESLKISYLPQEFVMYSGSLKDFAKKY 133

Query: 63  GAEAEAIV-----FAAARLDHVENVIRPALMEGKIL 93
               EA++        AR D    + + ++ + K +
Sbjct: 134 HLSYEALLSNLKKMGFARADFTTRIEKMSMGQQKRV 169


>gi|313112616|ref|ZP_07798274.1| putrescine/spermidine ABC transporter ATPase protein
          [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310625039|gb|EFQ08336.1| putrescine/spermidine ABC transporter ATPase protein
          [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 348

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          F++  G  G GKTT + L+  FL+  +  V +  E 
Sbjct: 34 FVTLLGPSGCGKTTTLRLIAGFLEPNSGKVLLKGEN 69


>gi|307594387|ref|YP_003900704.1| hypothetical protein Vdis_0241 [Vulcanisaeta distributa DSM
          14429]
 gi|307549588|gb|ADN49653.1| protein of unknown function DUF265 [Vulcanisaeta distributa DSM
          14429]
          Length = 180

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 6/52 (11%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTRE--PGGTPAAEAARHV 53
           I+  G  G GKTT I  L    +    +V   +T E   GG+        +
Sbjct: 5  LIT--GPPGVGKTTLIKRLVDHARSMGVEVFGFITTEVREGGSRVGFRIVDI 54


>gi|303255112|ref|ZP_07341188.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS455]
 gi|301801136|emb|CBW33809.1| UvrABC system protein A (UvrA protein) [Streptococcus pneumoniae
           INV200]
 gi|302597942|gb|EFL65012.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS455]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|326780147|ref|ZP_08239412.1| FHA modulated ABC efflux pump protein, with fused ATPase and
           integral membrane subunits [Streptomyces cf. griseus
           XylebKG-1]
 gi|326660480|gb|EGE45326.1| FHA modulated ABC efflux pump protein, with fused ATPase and
           integral membrane subunits [Streptomyces cf. griseus
           XylebKG-1]
          Length = 865

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G+GK+T +  L  +      DV           AE  + + L    D    E
Sbjct: 329 LIAVIGPSGSGKSTLLKALTGYRPANQGDVLYDNRNLYKQFAELRQRIGLVPQDDILHKE 388

Query: 66  ---AEAIVFAA 73
               +A+ +AA
Sbjct: 389 LSVTKALKYAA 399


>gi|257455444|ref|ZP_05620679.1| cell division protein FtsY [Enhydrobacter aerosaccus SK60]
 gi|257447406|gb|EEV22414.1| cell division protein FtsY [Enhydrobacter aerosaccus SK60]
          Length = 404

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 207 GVNGVGKTTTIGKLAKRLQGEGKSVMLAA--GDTFRAAATEQLQVWGERNNIPVVAQG-- 262

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             +     + + I+ A   G  +L+ D
Sbjct: 263 HGSDSASVIFDAIQSAKARGIDVLIAD 289


>gi|326202061|ref|ZP_08191931.1| guanylate kinase [Clostridium papyrosolvens DSM 2782]
 gi|325987856|gb|EGD48682.1| guanylate kinase [Clostridium papyrosolvens DSM 2782]
          Length = 207

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 54/171 (31%), Gaps = 32/171 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
             GL +   G  G GK T    L        Y V   TR+P        +   +      
Sbjct: 3   QKGLLVVVSGPSGTGKGTVCKKLLSQRDNVRYSVSATTRKPREGEIEGQSYFFVSESKFL 62

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +               D +    +          CD +  +  +Y    DS     +D +
Sbjct: 63  DMIKN-----------DALIEWDKY---------CDNYYGTPKSY---VDSCMENGMDII 99

Query: 121 QEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
            EI+V+  +      PD  +I  LP       ++ R   R + C D  E++
Sbjct: 100 LEITVEGALEIKQKYPDSVLIFILPP--SFDELRRRIECRATECTDVIEKR 148


>gi|239940285|ref|ZP_04692222.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 864

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G+GK+T +  L  +      DV           AE  + + L    D    E
Sbjct: 328 LIAVIGPSGSGKSTLLKALTGYRPANQGDVLYDNRNLYKQFAELRQRIGLVPQDDILHKE 387

Query: 66  ---AEAIVFAA 73
               +A+ +AA
Sbjct: 388 LTVTKALKYAA 398


>gi|238752568|ref|ZP_04614042.1| Shikimate kinase 2 [Yersinia rohdei ATCC 43380]
 gi|238709243|gb|EEQ01487.1| Shikimate kinase 2 [Yersinia rohdei ATCC 43380]
          Length = 168

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 8/81 (9%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFLDIARNQPDRCH 189
             + L    ++  +R+       +   L       + + +   R  ++ ++A       H
Sbjct: 90  LVVYLQASANVLAERLAEDPEDAQRPSLTGKPIVEEMLDVLASREALYQEVAH------H 143

Query: 190 IVDSAHSFQSVATNILNIVWE 210
           ++D+    + V   IL I+ +
Sbjct: 144 VLDATQRPEDVVEQILQILAD 164


>gi|225010286|ref|ZP_03700758.1| ABC transporter-related protein [Flavobacteria bacterium
          MS024-3C]
 gi|225005765|gb|EEG43715.1| ABC transporter-related protein [Flavobacteria bacterium
          MS024-3C]
          Length = 332

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGT--PAAEAARHVLLSC 57
          G  ++  G  G+GK+T + L+   L  +   +H  +E    P     P A   R++    
Sbjct: 26 GKLMALTGASGSGKSTLLKLIYGSLAPEKGQIHWKKEALLGPEYNLLPGAPFLRYLAQDF 85

Query: 58 GVDEFGAEAE 67
           +  F + AE
Sbjct: 86 DLMPFTSVAE 95


>gi|222084757|ref|YP_002543286.1| pantothenate kinase protein [Agrobacterium radiobacter K84]
 gi|221722205|gb|ACM25361.1| pantothenate kinase protein [Agrobacterium radiobacter K84]
          Length = 210

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 3/75 (4%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG--VDE 61
            ++  G  GAGK+T    +   L+ K      +  +      A      LL      + 
Sbjct: 22 FLVAIAGPPGAGKSTLADKVAEALRAKGESAEVLPMDGFHMDNAVLIEKGLLKRKGVPES 81

Query: 62 FGAEAEAIVFAAARL 76
          F   A   +  A R 
Sbjct: 82 FDVRAFLDIVKAVRA 96


>gi|239820211|ref|YP_002947396.1| ABC transporter related [Variovorax paradoxus S110]
 gi|239805064|gb|ACS22130.1| ABC transporter related [Variovorax paradoxus S110]
          Length = 366

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
            G FI+  G  G GK+T ++ L   L
Sbjct: 37 KRGEFIALLGPSGCGKSTALNCLAGLL 63


>gi|218512230|ref|ZP_03509070.1| probable sugar uptake ABC transporter, ATP-binding protein
          [Rhizobium etli 8C-3]
          Length = 86

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
           +G F+ F G  G GK+T + ++ 
Sbjct: 27 KNGEFVVFVGPSGCGKSTLLRMIA 50


>gi|220933330|ref|YP_002512229.1| hypothetical protein Tgr7_0141 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994640|gb|ACL71242.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 393

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 27/94 (28%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P  T   +                  
Sbjct: 170 ILFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPTETERGQW----------------- 212

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 213 ----YFQRYIQHLPT-------AGEIVLFDRSWY 235


>gi|187251802|ref|YP_001876284.1| adenylate kinase [Elusimicrobium minutum Pei191]
 gi|226743874|sp|B2KEK1|KAD_ELUMP RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
          transphosphorylase
 gi|186971962|gb|ACC98947.1| Adenylate kinase [Elusimicrobium minutum Pei191]
          Length = 214

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 22/100 (22%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REP--GGTPAAEAARHVLLSCG 58
          + I   G  GAGK T   L+     +       T    RE     T   + A+ ++   G
Sbjct: 1  MIIVLLGAPGAGKGTQSVLVAE---KYGLKHISTGDLLREEIANNTELGKQAKKLI-DGG 56

Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
                    ++  A             L  GK ++ D F
Sbjct: 57 NLVPDEMILGLLKNA------------FLNRGKGVVLDGF 84


>gi|157415441|ref|YP_001482697.1| guanylate kinase [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386405|gb|ABV52720.1| guanylate kinase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748083|gb|ADN91353.1| Guanylate kinase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932321|gb|EFV11264.1| guanylate kinase [Campylobacter jejuni subsp. jejuni 327]
          Length = 205

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60
            G  +   G  GAGK+T +  L    + + Y      TR+P          H + S    
Sbjct: 2   QGFILLISGPSGAGKSTLLKKLFDEFEDELYFSISSTTRKPREGEKNGIHYHFI-SHEEF 60

Query: 61  EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96
           + G + +  +  A   ++         + AL  GKI++ D
Sbjct: 61  QKGIDGDHFLEWAKVHENFYGTSLKHTQDALDNGKIVVFD 100


>gi|156408055|ref|XP_001641672.1| predicted protein [Nematostella vectensis]
 gi|156228812|gb|EDO49609.1| predicted protein [Nematostella vectensis]
          Length = 379

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I F G  GAGK+T I    + L  K   V  +  +P     GG+   +  R   LS    
Sbjct: 104 IGFSGPPGAGKSTFIEFFGKMLTSKGQKVAVLAVDPSSSRTGGSLLGDKTRMTELSRDPK 163

Query: 61  EF 62
            +
Sbjct: 164 AY 165


>gi|153854796|ref|ZP_01996030.1| hypothetical protein DORLON_02028 [Dorea longicatena DSM 13814]
 gi|149752703|gb|EDM62634.1| hypothetical protein DORLON_02028 [Dorea longicatena DSM 13814]
          Length = 525

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          F++  G  G GKTT + +L  FL      V    E
Sbjct: 34 FVTLLGPSGCGKTTLLRILGGFLDADEGKVIFDNE 68


>gi|152998337|ref|YP_001343172.1| ABC transporter-like protein [Marinomonas sp. MWYL1]
 gi|150839261|gb|ABR73237.1| ABC transporter related [Marinomonas sp. MWYL1]
          Length = 366

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G FI F G  G GK+T + ++
Sbjct: 27 IKQGEFIVFVGPSGCGKSTLLRMI 50


>gi|86606611|ref|YP_475374.1| twitching motility protein [Synechococcus sp. JA-3-3Ab]
 gi|86555153|gb|ABD00111.1| twitching motility protein [Synechococcus sp. JA-3-3Ab]
          Length = 376

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK+T ++ +  F+ R+  +  +T E          R ++    + E        +
Sbjct: 129 GPTGSGKSTTLAAIIDFINRERAEHILTIEDPIEYIYTPIRSIIHQRQLGEDTKSFANAL 188

Query: 71  FAAARLD 77
            AA R D
Sbjct: 189 RAAMRED 195


>gi|72162323|ref|YP_289980.1| hypothetical protein Tfu_1924 [Thermobifida fusca YX]
 gi|71916055|gb|AAZ55957.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 191

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 12/67 (17%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT--REPGGTPAAEAARHV-------LL 55
            ++ EG  GAGKTT    L        + V       PG T  A +   +       LL
Sbjct: 24 RLVAIEGRSGAGKTTLAEALAA---ETGWPVFHMDDVYPGWTGLAASVDLLACWVVMPLL 80

Query: 56 SCGVDEF 62
          +     +
Sbjct: 81 NGANPRW 87


>gi|121605281|ref|YP_982610.1| arginine/ornithine transport system ATPase [Polaromonas
          naphthalenivorans CJ2]
 gi|120594250|gb|ABM37689.1| LAO/AO transport system ATPase [Polaromonas naphthalenivorans
          CJ2]
          Length = 334

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
            G+ G GK+T I +L  +L ++ + V  +T +P  T +  + 
Sbjct: 53 ISGVPGVGKSTFIEVLGLYLIKQGHRVAVLTIDPSSTVSGGSI 95


>gi|116626956|ref|YP_829112.1| adenylylsulfate kinase/phosphoadenylylsulfate reductase
           (thioredoxin) [Candidatus Solibacter usitatus Ellin6076]
 gi|116230118|gb|ABJ88827.1| adenylylsulfate kinase / phosphoadenylylsulfate reductase
           (thioredoxin) [Candidatus Solibacter usitatus Ellin6076]
          Length = 426

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
           M+ G  + F G+ GAGK+T    L+  L+ +   V
Sbjct: 244 MHKGFTLWFTGMSGAGKSTISRQLELKLRERGARV 278


>gi|310287223|ref|YP_003938481.1| cobalt/nickel transport system, ATP-binding protein
           [Bifidobacterium bifidum S17]
 gi|309251159|gb|ADO52907.1| cobalt/nickel transport system, ATP-binding protein
           [Bifidobacterium bifidum S17]
          Length = 262

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 12/108 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT + LL   L   +  V +T   G T  + A +  L            E I 
Sbjct: 54  GLNGAGKTTLLKLLDGALAATSGSVSITA--GETALSPAVKRDLKRIEDIVGRVRREEIP 111

Query: 71  FAAARLDHVENVIRPALMEGKILLCDR----------FLDSSYAYQGE 108
            +  R   +   I   L + K+   +R          F  S+ A Q  
Sbjct: 112 DSYYRAATIREAIDQPLKKHKVPESERLAIVGNLFAHFGLSTVARQSA 159


>gi|302784130|ref|XP_002973837.1| hypothetical protein SELMODRAFT_414217 [Selaginella moellendorffii]
 gi|300158169|gb|EFJ24792.1| hypothetical protein SELMODRAFT_414217 [Selaginella moellendorffii]
          Length = 235

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 41/217 (18%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA---RHVLLSCGVDEFGA 64
           G+ G   +GK+T    L+         V    +       +     R VL   G      
Sbjct: 5   GLTGGIASGKSTVSKELRD---GSGLPVVDADKIARAALRKNTPGYRRVLKIFGKGILLP 61

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +               NV R  L  G I+  D               ++ +  D L+   
Sbjct: 62  D--------------GNVDREKL--GNIVFADSSQRKLLDRALGPVIARTMLWDVLKHWI 105

Query: 125 VQEVMPDCTIILDLP--VDIGLKRVQN---RYSLRESACLDYFERKDVMIHEKRR----- 174
                    ++LD+P   + G+ R  +      +      +    +D +  E+ R     
Sbjct: 106 AGTP----VLVLDVPLLFETGMDRYTSPVVVVWVDADTEEERLIARDGLSQEQARNRINS 161

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           Q  LD  R + D   ++D++ S +     I  +V ++
Sbjct: 162 QRSLDWKREKAD--VVIDNSGSLELTQQQIQELVEKI 196


>gi|198284460|ref|YP_002220781.1| signal recognition particle-docking protein FtsY [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198248981|gb|ACH84574.1| signal recognition particle-docking protein FtsY [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 343

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L    + + + V +
Sbjct: 145 GINGAGKTTTIGKLAARWKAEGFTVVL 171


>gi|194398387|ref|YP_002036891.1| excinuclease ABC subunit A [Streptococcus pneumoniae G54]
 gi|225860233|ref|YP_002741742.1| excinuclease ABC subunit A [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230668|ref|ZP_06964349.1| excinuclease ABC subunit A [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255969|ref|ZP_06979555.1| excinuclease ABC subunit A [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|194358054|gb|ACF56502.1| excinuclease ABC, A subunit [Streptococcus pneumoniae G54]
 gi|225727862|gb|ACO23713.1| excinuclease ABC, A subunit [Streptococcus pneumoniae Taiwan19F-14]
          Length = 943

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|182439483|ref|YP_001827202.1| putative ABC transporter ATP-binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178467999|dbj|BAG22519.1| putative ABC transporter ATP-binding protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 864

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G+GK+T +  L  +      DV           AE  + + L    D    E
Sbjct: 328 LIAVIGPSGSGKSTLLKALTGYRPANQGDVLYDNRNLYKQFAELRQRIGLVPQDDILHKE 387

Query: 66  ---AEAIVFAA 73
               +A+ +AA
Sbjct: 388 LSVTKALKYAA 398


>gi|169630981|ref|YP_001704630.1| hypothetical protein MAB_3902c [Mycobacterium abscessus ATCC 19977]
 gi|169242948|emb|CAM63976.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 519

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 58/207 (28%), Gaps = 38/207 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEAI 69
           G  GAGK+T    +          V  T E       +    + ++S G     A   + 
Sbjct: 337 GGPGAGKSTLARRISE---DIGAQVISTDE-----VRQQLHRLGVISGGKGVLDAGLYST 388

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
               A  D V    R AL  G  ++ D          G   S +H       +++ +   
Sbjct: 389 ENVGAVYDAVLRRARLALAGGHTVILD----------GTWRSPRHRLRA--HQLAYEAGA 436

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR-- 187
           P    +   P+     RV  R+     A  D                        PDR  
Sbjct: 437 PMVEFLCLAPLVTAQHRVAARHDGVSDATGDIAAALGAEF-------------AGPDRGW 483

Query: 188 --CHIVDSAHSFQSVATNILNIVWELV 212
              H++D+             +  + +
Sbjct: 484 GEAHVIDTRLPLDRSTAEAEELCRQAL 510


>gi|170041702|ref|XP_001848593.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167865253|gb|EDS28636.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 120

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 27/75 (36%)

Query: 141 DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200
           +  + R+  R S   +   D  E          R+    I    P +   +++  + + +
Sbjct: 42  ETLVARIMKRASESATVRADDNEETLKTRIATFRENTEKILVQYPTQLRRINAERAPEEI 101

Query: 201 ATNILNIVWELVQKR 215
              +   + EL+ K+
Sbjct: 102 FAEVEKSIDELLAKK 116


>gi|126652511|ref|ZP_01724676.1| ABC transporter-like protein [Bacillus sp. B14905]
 gi|126590639|gb|EAZ84755.1| ABC transporter-like protein [Bacillus sp. B14905]
          Length = 333

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G FI+  G  G GK+T + ++ 
Sbjct: 26 IDKGEFITLLGPSGCGKSTILRIVA 50


>gi|121635651|ref|YP_975896.1| putative ABC transporter ATP-binding subunit [Neisseria
           meningitidis FAM18]
 gi|120867357|emb|CAM11128.1| putative ABC transporter ATP-binding subunit [Neisseria
           meningitidis FAM18]
          Length = 252

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 17/103 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEA 68
           G  GAGK+T  S + R          +  +   GTP AE AR + +L+            
Sbjct: 34  GPNGAGKSTLFSFMARLRPLESGSIAYRGKNLAGTPTAELARTLSILTQENSIMSRITVR 93

Query: 69  IVFAAARL-DHVENVIRPALMEGKIL-----------LCDRFL 99
            +    R   H     RP     +I+           L DR+L
Sbjct: 94  DLLMFGRYPYHQG---RPTAECHRIVNGAIEEFHLQDLSDRYL 133


>gi|118431668|ref|NP_148297.2| hypothetical protein APE_1971.1 [Aeropyrum pernix K1]
 gi|116062991|dbj|BAA80981.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 450

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREP 41
           GAGK+T    + R ++ K Y V   R P
Sbjct: 133 GAGKSTVSRAIARIMRGKGYRVVPVRHP 160


>gi|110003922|emb|CAK98262.1| probable abc transporter atp binding protein [Spiroplasma citri]
          Length = 313

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 3   SGLFISFEGIEGAGKTTHISLL 24
            G FI   G  G+GKTT ++++
Sbjct: 108 KGDFIVILGPSGSGKTTLLNII 129


>gi|15895123|ref|NP_348472.1| cytidylate kinase [Clostridium acetobutylicum ATCC 824]
 gi|22001673|sp|Q97I08|KCY_CLOAB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|15024824|gb|AAK79812.1|AE007693_10 Cytidylate kinase [Clostridium acetobutylicum ATCC 824]
 gi|325509262|gb|ADZ20898.1| cytidylate kinase [Clostridium acetobutylicum EA 2018]
          Length = 217

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  GAGK+T   L+ +  +    +              A R  + +  V +     
Sbjct: 5  IAIDGPAGAGKSTIAKLVAKKFRLMYINTGAMY---RAVTLMAMRQNIRANDVKKLCDLI 61

Query: 67 EAI 69
          E++
Sbjct: 62 ESL 64


>gi|238793545|ref|ZP_04637169.1| Cell division protein ftsY [Yersinia intermedia ATCC 29909]
 gi|238727135|gb|EEQ18665.1| Cell division protein ftsY [Yersinia intermedia ATCC 29909]
          Length = 505

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 308 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGDRNKIAVVAQH-- 363

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 364 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 409


>gi|330994735|ref|ZP_08318657.1| enzyme nodQ [Gluconacetobacter sp. SXCC-1]
 gi|329757996|gb|EGG74518.1| enzyme nodQ [Gluconacetobacter sp. SXCC-1]
          Length = 630

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 32/120 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T     +  L  +  DV                  +L       G  ++   
Sbjct: 457 GLPGAGKSTLARGAENRLFARGIDV-----------------SVLDGDTLRAGLCSDLGF 499

Query: 71  FAAARLDHVEN---VIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQHLFLDS 119
             A R ++V     V R     G++++         DR      A Q   +    +F+D+
Sbjct: 500 SDADRRENVRRAAAVARILAESGQVVIVALISPTVADR----ELARQIVGEGFHEIFIDT 555


>gi|307274348|ref|ZP_07555539.1| conserved domain protein [Enterococcus faecalis TX0855]
 gi|306508974|gb|EFM78053.1| conserved domain protein [Enterococcus faecalis TX0855]
          Length = 253

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+GKTT + LL +   + N+ V +    G     E+ R +
Sbjct: 129 GSGKTTLLQLLVQHAVKFNFPVILIDGKGARDTLESMREI 168


>gi|297379382|gb|ADI34269.1| Shikimate kinase [Helicobacter pylori v225d]
          Length = 162

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 48/197 (24%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVRGIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131
             +D ++ +  P ++   G I++ D                      +L+ +        
Sbjct: 62  NLIDELKTLKTPHIISTGGGIVMHD----------------------NLKGLGT------ 93

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T  L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+
Sbjct: 94  -TFYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FII 144

Query: 192 DSAHSFQSVATNILNIV 208
           D+     +    +L  +
Sbjct: 145 DARGGLNNSLKQVLQFI 161


>gi|296419043|ref|XP_002839134.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635129|emb|CAZ83325.1| unnamed protein product [Tuber melanosporum]
          Length = 201

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 57/190 (30%), Gaps = 51/190 (26%)

Query: 7   ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I      G GK+T ++ L     +   + V H TR+P                       
Sbjct: 18  IVLSAPSGTGKSTLLTRLFASHPETFGFSVSHTTRKPRSGEVEG--------VEYHFVTP 69

Query: 65  EA-EAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           E  E+++   A ++H              +R     G++ + D                +
Sbjct: 70  ETFESLIERDAFIEHTRFSGNYYGTSVEAVRAVAERGRVCVLD---------------IE 114

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERK--DVMI 169
              +  ++   +        + L  P   ++   R++ R +  E +     ER   ++  
Sbjct: 115 MEGVKQVKRTDLGAKF----VFLK-PPSLEVLRSRLEGRGTETEESLGKRLERARVELEF 169

Query: 170 ------HEKR 173
                 H+K 
Sbjct: 170 AEVPGVHDKV 179


>gi|227501155|ref|ZP_03931204.1| adenylate kinase [Anaerococcus tetradius ATCC 35098]
 gi|227216740|gb|EEI82141.1| adenylate kinase [Anaerococcus tetradius ATCC 35098]
          Length = 218

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 21/148 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + +   +++K      T +      +      L +    + G   
Sbjct: 3   IILLGPPGAGKGTLANKI---IEKKGAVQIATGDIFRYNISNKTELGLKAKSYMDRGDLV 59

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHLFLDSLQEI 123
              +      D  +   +    EG+I+L D   R LD + A            ++  Q+I
Sbjct: 60  PDELTIDLVWDAFDKH-KDESKEGRIILFDGFPRNLDQAKA-------LDQGMIERNQKI 111

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY 151
                  D  +  D+  +I ++R+  R 
Sbjct: 112 -------DHVVYFDVAEEILIERIAGRR 132


>gi|226307171|ref|YP_002767131.1| ABC transporter ATP-binding protein [Rhodococcus erythropolis
          PR4]
 gi|226186288|dbj|BAH34392.1| putative ABC transporter ATP-binding protein [Rhodococcus
          erythropolis PR4]
          Length = 364

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI   G  G+GK+T + +L 
Sbjct: 28 IKDGEFIVLVGPSGSGKSTALRMLA 52


>gi|218295257|ref|ZP_03496093.1| excinuclease ABC, A subunit [Thermus aquaticus Y51MC23]
 gi|218244460|gb|EED10985.1| excinuclease ABC, A subunit [Thermus aquaticus Y51MC23]
          Length = 952

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G  G+GK+T I  +L   L +K      T  PG   A E   H+
Sbjct: 636 GRFVAVTGPSGSGKSTLIHDILYAALAQKLMRAKTT--PGAYEALEGVEHL 684



 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 3  SGLFISFEGIEGAGKTTHI 21
           G FI   G+ G+GK+T  
Sbjct: 23 RGKFIVITGVSGSGKSTLA 41


>gi|169827218|ref|YP_001697376.1| spermidine/putrescine import ATP-binding protein [Lysinibacillus
          sphaericus C3-41]
 gi|168991706|gb|ACA39246.1| Spermidine/putrescine import ATP-binding protein [Lysinibacillus
          sphaericus C3-41]
          Length = 333

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G FI+  G  G GK+T + ++ 
Sbjct: 26 IDKGEFITLLGPSGCGKSTILRIVA 50


>gi|146296769|ref|YP_001180540.1| ABC transporter related [Caldicellulosiruptor saccharolyticus DSM
          8903]
 gi|145410345|gb|ABP67349.1| ABC transporter related protein [Caldicellulosiruptor
          saccharolyticus DSM 8903]
          Length = 278

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F+S  G+ G+GK+T   L+   L  +  DV V
Sbjct: 34 KGEFVSILGLNGSGKSTLAKLINGLLIPEKGDVLV 68


>gi|93005070|ref|YP_579507.1| putrescine/spermidine ABC transporter ATPase protein
          [Psychrobacter cryohalolentis K5]
 gi|123386797|sp|Q1QE80|POTA_PSYCK RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|92392748|gb|ABE74023.1| spermidine/putrescine ABC transporter ATP-binding subunit
          [Psychrobacter cryohalolentis K5]
          Length = 402

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI+  G  G GKTT + L+ 
Sbjct: 44 IKHGEFITLLGPSGCGKTTLLRLIA 68


>gi|119357327|ref|YP_911971.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
           phaeobacteroides DSM 266]
 gi|119354676|gb|ABL65547.1| signal recognition particle subunit FFH/SRP54 (srp54) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 449

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 25/133 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69
           G++G+GKTT  + L + L++   +  +       PAA +  R +         G + +  
Sbjct: 108 GLQGSGKTTFCAKLAKRLKKNGKNPMLVAADVYRPAAVDQLRTL---------GEQVDVP 158

Query: 70  VFAAARLDHVENVIRPA----LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           VF+    D ++  ++      L    +++ D            R       +   + +  
Sbjct: 159 VFSIDEQDAMKAAVKGLEAARLAAKDVVIID---------TAGRLQIDEKMMAEAEAL-K 208

Query: 126 QEVMPD-CTIILD 137
             + PD    ++D
Sbjct: 209 HALKPDELLFVVD 221


>gi|94985314|ref|YP_604678.1| DNA repair protein RadA [Deinococcus geothermalis DSM 11300]
 gi|94555595|gb|ABF45509.1| DNA repair protein RadA [Deinococcus geothermalis DSM 11300]
          Length = 449

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 12/85 (14%)

Query: 7   ISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           ++  G E G GK+T +  +   L R    V       G  + E  R        D     
Sbjct: 95  VTLIGGEPGIGKSTLLLQVADRLARNGQTVLYV---AGEESLEQIR-----LRADRLNVT 146

Query: 66  AEAIVFAAARLDHVENVI---RPAL 87
           AE  +    R +H+  ++   RPAL
Sbjct: 147 AEIQLTRDTRAEHIAALMQEHRPAL 171


>gi|116617517|ref|YP_817888.1| excinuclease ABC subunit A [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096364|gb|ABJ61515.1| Excinuclease ABC subunit A [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 952

 Score = 35.8 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G+ G+GK+T +       LK+ L   +      R   GT   E    +
Sbjct: 639 GKFVAVTGVSGSGKSTLVNTVLKRALKQKLNNNSEKPGAYRSIEGTENIEQIVDI 693


>gi|330998961|ref|ZP_08322686.1| polyphosphate kinase 2 [Parasutterella excrementihominis YIT 11859]
 gi|329575703|gb|EGG57229.1| polyphosphate kinase 2 [Parasutterella excrementihominis YIT 11859]
          Length = 402

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      E                  
Sbjct: 162 ILFEGRDAAGKGGTIRRFMEHLNPRGARVVALEKPTQRELGEW----------------- 204

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                      + +  ++     G+I+L DR   
Sbjct: 205 -----------YFQRYVKHLPTAGEIVLFDRSWY 227


>gi|325090013|gb|EGC43323.1| adenylsulfate kinase [Ajellomyces capsulatus H88]
          Length = 216

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 34/154 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T    L+  L  + Y+V   R               L      
Sbjct: 23  QQGLTIWLTGLSASGKSTIAVELEHQLLTQ-YNVAAYR---------------LDGDNIR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118
           FG   +     A R +++  +   A +         F DS + A                
Sbjct: 67  FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNTIAITSFISPYRKDRELAR 117

Query: 119 SLQEISVQEV------MPDCTIILDLPVDIGLKR 146
            L   ++         +P   + +D+PV++  +R
Sbjct: 118 QLHAAAIHGEGEQESGLPFVEVYIDVPVEVAEQR 151


>gi|313204011|ref|YP_004042668.1| glycosyl transferase group 1 [Paludibacter propionicigenes WB4]
 gi|312443327|gb|ADQ79683.1| glycosyl transferase group 1 [Paludibacter propionicigenes WB4]
          Length = 393

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 11/60 (18%)

Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHI--VDSAHSF----QSVATNILNIVWELVQKR 215
            E       EK R++F       P++     ++++ S     +S+A  +L+   +L++++
Sbjct: 336 IEESSRAFAEKLRELF-----KSPEKIREAGINASQSIARSWESIAEEVLDRYRKLIERK 390


>gi|291443718|ref|ZP_06583108.1| ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL
           15998]
 gi|291346665|gb|EFE73569.1| ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL
           15998]
          Length = 834

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G+GK+T +  L  +      DV           AE  + + L    D    E
Sbjct: 298 LIAVIGPSGSGKSTLLKALTGYRPANQGDVLYDNRNLYKQFAELRQRIGLVPQDDILHKE 357

Query: 66  ---AEAIVFAA 73
               +A+ +AA
Sbjct: 358 LTVTKALKYAA 368


>gi|284047309|ref|YP_003397649.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283951530|gb|ADB54274.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 228

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           + F G  GAGK+T + +L   L+    +V V  E
Sbjct: 35 LVVF-GPNGAGKSTLLRVLATLLRPHGGEVTVLGE 68


>gi|225560009|gb|EEH08291.1| adenylsulfate kinase [Ajellomyces capsulatus G186AR]
          Length = 216

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 34/154 (22%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             GL I   G+  +GK+T    L+  L  + Y+V   R               L      
Sbjct: 23  QQGLTIWLTGLSASGKSTIAVELEHQLLTQ-YNVAAYR---------------LDGDNIR 66

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118
           FG   +     A R +++  +   A +         F DS + A                
Sbjct: 67  FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNTIAITSFISPYRKDRELAR 117

Query: 119 SLQEISVQEV------MPDCTIILDLPVDIGLKR 146
            L   ++         +P   + +D+PV++  +R
Sbjct: 118 QLHAAAIHGEGEQESGLPFVEVYIDVPVEVAEQR 151


>gi|188026271|ref|ZP_02961508.2| hypothetical protein PROSTU_03543 [Providencia stuartii ATCC 25827]
 gi|188022297|gb|EDU60337.1| hypothetical protein PROSTU_03543 [Providencia stuartii ATCC 25827]
          Length = 594

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 22/67 (32%), Gaps = 9/67 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M  G         G GKTT  + +   L  K  DVH+T              VL +  V 
Sbjct: 344 MGKG---------GVGKTTIAASIAVKLAEKGLDVHLTTSDPAAHVESTLDGVLPNLQVS 394

Query: 61  EFGAEAE 67
                AE
Sbjct: 395 RIDPIAE 401


>gi|171186166|ref|YP_001795085.1| ATPase [Thermoproteus neutrophilus V24Sta]
 gi|170935378|gb|ACB40639.1| PilT protein domain protein [Thermoproteus neutrophilus V24Sta]
          Length = 518

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 11/60 (18%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ I+  G  GAGKTT    L  F   K   V     P         R ++LS  + +  
Sbjct: 259 GILIA--GAPGAGKTTFAQALAEFYLSKGKIVKTLESP---------RDMVLSPAITQIS 307


>gi|167755560|ref|ZP_02427687.1| hypothetical protein CLORAM_01074 [Clostridium ramosum DSM 1402]
 gi|237734311|ref|ZP_04564792.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167704499|gb|EDS19078.1| hypothetical protein CLORAM_01074 [Clostridium ramosum DSM 1402]
 gi|229382541|gb|EEO32632.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 505

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          +N G F+   G  G GKTT + LLK  LQ   
Sbjct: 25 INKGDFVVICGESGCGKTTLLRLLKSSLQPTG 56


>gi|162456493|ref|YP_001618860.1| putative DNA helicase [Sorangium cellulosum 'So ce 56']
 gi|161167075|emb|CAN98380.1| putative DNA helicase [Sorangium cellulosum 'So ce 56']
          Length = 955

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           F+  EG  G+GKTT I  L   L  +N  V + 
Sbjct: 300 FMLLEGPPGSGKTTAIVELVLQLAARNRRVLLC 332


>gi|270308525|ref|YP_003330583.1| Tfp pilus assembly protein pilus retraction ATPase [Dehalococcoides
           sp. VS]
 gi|270154417|gb|ACZ62255.1| Tfp pilus assembly protein pilus retraction ATPase [Dehalococcoides
           sp. VS]
          Length = 371

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 31/131 (23%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREP-------------------G 42
            GL I   G  G+GK+T ++ + + L   +N  V    +P                    
Sbjct: 124 RGLVIV-TGPTGSGKSTTLAAMIQHLNNTENKHVVTIEDPIEYVHPCIKCAVTQRQLGSD 182

Query: 43  GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102
                 A +HVL          E   +  AAA        +      G ++L      S 
Sbjct: 183 TLSFGHALKHVLRQNPDVIMVGEMRDLDTAAA--------VLTIAETGHLVLSTSHAPS- 233

Query: 103 YAYQGERDSSQ 113
            AYQ       
Sbjct: 234 -AYQALERIID 243


>gi|124028501|ref|YP_001013821.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
           5456]
 gi|171769654|sp|A2BNB5|SRP54_HYPBU RecName: Full=Signal recognition 54 kDa protein; AltName:
           Full=SRP54
 gi|123979195|gb|ABM81476.1| Signal recognition particle GTPase [Hyperthermus butylicus DSM
           5456]
          Length = 447

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 28/136 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT +  L +F +   Y V V       P A           + +    A A+ 
Sbjct: 105 GVQGSGKTTTVGKLAKFYRGMGYRVGVVAADTYRPGAYE--------QLKQLADRAGAMF 156

Query: 71  F----AAARLDHVENVIRPALMEG-KILLCD---RFLDSSYAYQGERDSSQHLFLDSLQE 122
           +    +   +      +      G  I++ D   R               +   LD ++ 
Sbjct: 157 YGEPGSKDPVGIARRGVEELKQRGADIVIVDTAGRH----------GYGEEEALLDEMKR 206

Query: 123 ISVQEVMPD-CTIILD 137
           I+ + + PD   +++D
Sbjct: 207 IA-EAIKPDEVVLVID 221


>gi|159044563|ref|YP_001533357.1| sn-glycerol-3-phosphate import ATP-binding protein [Dinoroseobacter
           shibae DFL 12]
 gi|157912323|gb|ABV93756.1| sn-glycerol-3-phosphate import ATP-binding protein [Dinoroseobacter
           shibae DFL 12]
          Length = 333

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 8/73 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
           G FI   G  G GK+T + ++   L+       R +  V  T EP     A   ++  L 
Sbjct: 29  GEFIVIVGPSGCGKSTLLRMVAG-LETVSSGEVRIDGRVVNTLEPMDRDIAMVFQNYALY 87

Query: 57  CGVDEFGAEAEAI 69
             +  F   A  +
Sbjct: 88  PHMSVFDNMAYGL 100


>gi|157135038|ref|XP_001663402.1| ATP-dependent RNA helicase [Aedes aegypti]
 gi|122093315|sp|Q16JS8|SPNE_AEDAE RecName: Full=Probable ATP-dependent RNA helicase spindle-E
 gi|108870308|gb|EAT34533.1| ATP-dependent RNA helicase [Aedes aegypti]
          Length = 1374

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 7  ISFEGIEGAGKTTHI 21
          I  EG  G GKTT +
Sbjct: 55 IVLEGPTGCGKTTQV 69


>gi|15679603|ref|NP_276720.1| signal recognition particle protein (docking protein)
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622733|gb|AAB86081.1| signal recognition particle protein (docking protein)
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 358

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
              L I F GI G GKTT I+ + R+  +K  +  +      T  A A   +      D+
Sbjct: 161 KKPLVIMFVGINGTGKTTTIAKVARYFMKKGLEPVIAA--ADTFRAGAIEQI--GQHADK 216

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            G +  +    A       + +  A  +GK ++L D            R  +    +D +
Sbjct: 217 LGVKLISHRKGADPAAVAFDAVSHAKAQGKDVVLID---------TAGRMQTNVNLMDEM 267

Query: 121 QEISVQEVMPDCTII 135
            +I  + V PD  + 
Sbjct: 268 AKI-KRVVRPDLIVF 281


>gi|33600251|ref|NP_887811.1| hypothetical protein BB1265 [Bordetella bronchiseptica RB50]
 gi|33567849|emb|CAE31763.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 343

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P  +   +                  
Sbjct: 134 ILFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPSDSERGQW----------------- 176

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 177 ----YFQRYVQHLPT-------AGEIVLFDRSWY 199


>gi|13474260|ref|NP_105828.1| alpha-glucosides ABC transporter, ATP-binding protein
          [Mesorhizobium loti MAFF303099]
 gi|14025012|dbj|BAB51614.1| alpha-glucosides ABC transporter, ATP-binding protein
          [Mesorhizobium loti MAFF303099]
          Length = 370

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI F G  G GK+T +  + 
Sbjct: 26 IKSGEFIVFVGPSGCGKSTLLRSIA 50


>gi|15674604|ref|NP_268778.1| dephospho-CoA kinase [Streptococcus pyogenes M1 GAS]
 gi|14194501|sp|P58102|COAE_STRP1 RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme
           A kinase
 gi|13621715|gb|AAK33499.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
          Length = 197

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 72/226 (31%), Gaps = 44/226 (19%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH-----V 53
           + I   G   +GK+T + ++    ++  Y       V    +  G    EA R      +
Sbjct: 1   MIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFGNQI 56

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGER 109
           L + G  +    +E +      +         +I+  L   +             +  + 
Sbjct: 57  LKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HLAQS 104

Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
            +   + +  L E+  Q+   D   ++ +     L+R+  R  L +         +    
Sbjct: 105 QAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ---- 159

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                   L I   +P    ++D++    ++   + + +  L   R
Sbjct: 160 --------LPIEEKKPYASLVIDNSGDIAALIKQVQSALLLLANPR 197


>gi|83954705|ref|ZP_00963416.1| hypothetical protein NAS141_15828 [Sulfitobacter sp. NAS-14.1]
 gi|83840989|gb|EAP80160.1| hypothetical protein NAS141_15828 [Sulfitobacter sp. NAS-14.1]
          Length = 283

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M++G F++  G  G GK+T + L+   +Q
Sbjct: 52 MDAGDFVALVGPSGCGKSTILRLVSDLIQ 80


>gi|327460966|gb|EGF07299.1| dephospho-CoA kinase [Streptococcus sanguinis SK1057]
          Length = 198

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 53/222 (23%)

Query: 11  GIEG---AGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAAR---HVLLSC 57
           GI G   +GK+T       FL+++ Y        VH  +EPGG             +L  
Sbjct: 6   GITGGIASGKSTVT----EFLRQQGYQVIDADQVVHELQEPGGRLYQALLSTFGSAILQE 61

Query: 58  GVDEFGAEAEAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
                 ++  A++F      A        +IR  L        DR      A        
Sbjct: 62  DGRLDRSKLGAMIFGNPELLAQSSQIQNKIIREELA-------DR--RDLLAETQVVFFM 112

Query: 113 QHLFLDSL--QEISVQEVMPDCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169
               L  L  ++   Q       I L D+  +  L R+  R +L +           + +
Sbjct: 113 DLPLLFELQYEDWFDQ-------IWLVDVTEETQLSRLMTRNALSQVEAEKRI-AAQLSL 164

Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
            EK        A        ++D+  S ++    I + + +L
Sbjct: 165 QEK-----RKRAD------VLIDNNGSLEATRQQIRDALQKL 195


>gi|313889703|ref|ZP_07823346.1| excinuclease ABC, A subunit [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313122000|gb|EFR45096.1| excinuclease ABC, A subunit [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 941

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           G FI+  G+ G+GK+T I+ + + +  +N +
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKVVAQNLN 664


>gi|311280725|ref|YP_003942956.1| Shikimate kinase [Enterobacter cloacae SCF1]
 gi|308749920|gb|ADO49672.1| Shikimate kinase [Enterobacter cloacae SCF1]
          Length = 184

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 67/225 (29%), Gaps = 47/225 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M   +F+   G  G GKTT    L    Q   Y    T +     A      ++ + G  
Sbjct: 1   MTQPIFLI--GARGCGKTTIGRRLSEACQ---YQFIDTDQILQQRAQMTVADIVANEGWS 55

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F A     +       HV          G I+L                     F+   
Sbjct: 56  GFRARETQTLQTVTAAQHV------IATGGGIILA---------------PVNREFMRQ- 93

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                  V     I L  PV +   R++      +   L         I E+ R++    
Sbjct: 94  -----NGV----VIYLKAPVSVLAGRLEAFPEESQRPTL-----TGKPIAEEVREVLAQR 139

Query: 181 ARNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224
                +  H IVD+A+    V T IL  + +      SP  ++ +
Sbjct: 140 DALYREAAHTIVDAANEPDEVVTQILAALAD-----GSPQPARAN 179


>gi|290986637|ref|XP_002676030.1| guanine nucleotide-binding protein G(i) subunit alpha [Naegleria
          gruberi]
 gi|284089630|gb|EFC43286.1| guanine nucleotide-binding protein G(i) subunit alpha [Naegleria
          gruberi]
          Length = 608

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKN 32
          I   G+ GAGK+T I  LK ++  KN
Sbjct: 73 ILLLGLNGAGKSTIIKKLKEYITEKN 98


>gi|229048487|ref|ZP_04194050.1| ABC transporter-related protein [Bacillus cereus AH676]
 gi|228722852|gb|EEL74234.1| ABC transporter-related protein [Bacillus cereus AH676]
          Length = 229

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 8  GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 60


>gi|227537369|ref|ZP_03967418.1| possible Adenylyl-sulfate kinase [Sphingobacterium spiritivorum
          ATCC 33300]
 gi|227242747|gb|EEI92762.1| possible Adenylyl-sulfate kinase [Sphingobacterium spiritivorum
          ATCC 33300]
          Length = 185

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 18/28 (64%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          G+ G+GKTT   +LK  L+ ++Y V + 
Sbjct: 9  GLSGSGKTTLSKMLKTTLEEESYRVALV 36


>gi|224438372|ref|ZP_03659299.1| signal recognition particle protein [Helicobacter cinaedi CCUG
           18818]
 gi|313144814|ref|ZP_07807007.1| signal recognition particle protein [Helicobacter cinaedi CCUG
           18818]
 gi|313129845|gb|EFR47462.1| signal recognition particle protein [Helicobacter cinaedi CCUG
           18818]
          Length = 447

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++G+GKTT  + L  +L++K   V + 
Sbjct: 101 GLQGSGKTTSSAKLALYLKQKGKKVLLV 128


>gi|255552762|ref|XP_002517424.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
 gi|223543435|gb|EEF44966.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
          Length = 510

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 24/37 (64%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           ++SG+ ++  G  G+GK+T I+LL+RF      ++ +
Sbjct: 391 ISSGMTVALVGGSGSGKSTVIALLQRFYDPLGGEILL 427


>gi|184156158|ref|YP_001844498.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO
           3956]
 gi|183227502|dbj|BAG28018.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO
           3956]
          Length = 253

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 35/183 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHV 53
           +N G FI+  G  GAGK+T  +++   L            D+    + G T   +    V
Sbjct: 33  INPGDFITIVGTNGAGKSTLFNVIGGNLTADGGQLLHNGQDITHLSQEGRT---KFLARV 89

Query: 54  LLSCGVDEFGAEA--EAIVFAAARLD---HVENVIRPALMEGKILLCD-------RFLDS 101
                +         E ++ A  R      V   ++  L E K L+         R + +
Sbjct: 90  FQDPKLGTAPRMTVAENLLLAEKRGQARHLVFRRLKSRLTEFKTLVATMNNGLENRLMTA 149

Query: 102 SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRES 156
           + A  G +  +    + +L+        PD  ++LD     L        +         
Sbjct: 150 TGALSGGQRQALSFLMATLK-------RPDI-LLLDEHTAALDPHTSATLMAATDQRIRE 201

Query: 157 ACL 159
             L
Sbjct: 202 DKL 204


>gi|204928035|ref|ZP_03219235.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204322357|gb|EDZ07554.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322614246|gb|EFY11177.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621690|gb|EFY18543.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624551|gb|EFY21384.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628883|gb|EFY25666.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633391|gb|EFY30133.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636033|gb|EFY32741.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639626|gb|EFY36312.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322646925|gb|EFY43428.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322652226|gb|EFY48585.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322654695|gb|EFY51014.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322658916|gb|EFY55169.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664517|gb|EFY60711.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668234|gb|EFY64391.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673786|gb|EFY69887.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677847|gb|EFY73910.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681323|gb|EFY77355.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322683725|gb|EFY79735.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323193887|gb|EFZ79090.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323200356|gb|EFZ85438.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202378|gb|EFZ87422.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323205612|gb|EFZ90577.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323210125|gb|EFZ95028.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323216426|gb|EGA01153.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323220757|gb|EGA05198.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323226399|gb|EGA10607.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230721|gb|EGA14839.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234928|gb|EGA19014.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323238967|gb|EGA23017.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241667|gb|EGA25698.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248186|gb|EGA32122.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251230|gb|EGA35103.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323257386|gb|EGA41082.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263250|gb|EGA46788.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264248|gb|EGA47754.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271074|gb|EGA54502.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 201

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L ++    +                 LL       G   + 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHQRGVSTY-----------------LLDGDNVRHGLCCDL 75

Query: 69  IVFAAARLDHVENVIRPA---LMEGKILLC 95
               A R +++  V   A      G I+L 
Sbjct: 76  GFSDADRQENIRRVGEVASLMADAGLIVLT 105


>gi|149190560|ref|ZP_01868829.1| adenylylsulfate kinase [Vibrio shilonii AK1]
 gi|148835558|gb|EDL52526.1| adenylylsulfate kinase [Vibrio shilonii AK1]
          Length = 210

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L ++ Y  +                 LL       G   + 
Sbjct: 42  FTGLSGAGKSTVAGALETELTQRGYHTY-----------------LLDGDNVRHGLCRDL 84

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 85  GFSQQDRRENIRRVGELTKLMADAGLIVLS 114


>gi|30022850|ref|NP_834481.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579]
 gi|229130063|ref|ZP_04259025.1| ABC transporter-related protein [Bacillus cereus BDRD-Cer4]
 gi|229147355|ref|ZP_04275704.1| ABC transporter-related protein [Bacillus cereus BDRD-ST24]
 gi|296505249|ref|YP_003666949.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          BMB171]
 gi|29898409|gb|AAP11682.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579]
 gi|228636037|gb|EEK92518.1| ABC transporter-related protein [Bacillus cereus BDRD-ST24]
 gi|228653380|gb|EEL09256.1| ABC transporter-related protein [Bacillus cereus BDRD-Cer4]
 gi|296326301|gb|ADH09229.1| ABC transporter ATP-binding protein [Bacillus thuringiensis
          BMB171]
          Length = 254

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FIS  G  G GKTT +S++   L   +  V +  EP  T  +     +   
Sbjct: 33 GEFISILGPSGCGKTTLLSIIAGLLDPIDGIVFLDGEPITTKTSSMGYMLQQD 85


>gi|57640869|ref|YP_183347.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Thermococcus kodakarensis KOD1]
 gi|57159193|dbj|BAD85123.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Thermococcus kodakarensis KOD1]
          Length = 244

 Score = 35.8 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 13/67 (19%)

Query: 15 AGKTTHISLLKRFLQRKNYDVH--------VTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          +GKTT +  + R L+ + Y V           RE   T         +L    D      
Sbjct: 12 SGKTTTVEAVARVLKERGYRVAIAKSMHAEFDREGTDTWRFSRVADAVLVRAED-----T 66

Query: 67 EAIVFAA 73
          +A++F A
Sbjct: 67 DALLFKA 73


>gi|325568359|ref|ZP_08144726.1| hypothetical protein HMPREF9087_1015 [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158128|gb|EGC70281.1| hypothetical protein HMPREF9087_1015 [Enterococcus casseliflavus
           ATCC 12755]
          Length = 173

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 32/150 (21%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G  G+GKTT    ++        +  +  +          +    +      G 
Sbjct: 4   MLILLRGNSGSGKTTIAKAVQHVF---GEEAVLISQDVFRREIFCVKD---TPNNLASGL 57

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             EA+++A       +  +   L+EG        + S   YQ         FLD L ++ 
Sbjct: 58  MKEAVLYA-------KGKVPMILVEG--------IYSREKYQ--------DFLDFLMKLF 94

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154
            Q+         DL  +  +KR Q R    
Sbjct: 95  PQKK---LVYYFDLSFEETVKRHQTRMQRD 121


>gi|319789296|ref|YP_004150929.1| excinuclease ABC, A subunit [Thermovibrio ammonificans HB-1]
 gi|317113798|gb|ADU96288.1| excinuclease ABC, A subunit [Thermovibrio ammonificans HB-1]
          Length = 936

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNY 33
           GLFI   G+ G+GK+T +  +L + L R  Y
Sbjct: 630 GLFICVTGVSGSGKSTLVNEILYKALARHIY 660


>gi|317495182|ref|ZP_07953552.1| ABC transporter [Gemella moribillum M424]
 gi|316914604|gb|EFV36080.1| ABC transporter [Gemella moribillum M424]
          Length = 362

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GK+T + L+  FL   + DV +
Sbjct: 29 KGKFYTLLGPSGCGKSTILKLIGGFLSPTSGDVLL 63


>gi|282901021|ref|ZP_06308954.1| ABC transporter-like protein [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194112|gb|EFA69076.1| ABC transporter-like protein [Cylindrospermopsis raciborskii
           CS-505]
          Length = 282

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 19/91 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSCGVDEFGAE 65
           G  GAGK+T I +L   L       ++     TR+P       A R V+           
Sbjct: 53  GPNGAGKSTVIKILTTLLPASGGKAYLSGYDVTRQPN------AIRRVVGYVPQALSADG 106

Query: 66  A----EAIVFAAARLD----HVENVIRPALM 88
                E ++  A   D    H +  IR  L 
Sbjct: 107 TLTGYENLLIFAKIYDIPTRHRKQRIREMLE 137


>gi|237735844|ref|ZP_04566325.1| ABC transporter [Mollicutes bacterium D7]
 gi|229381589|gb|EEO31680.1| ABC transporter [Coprobacillus sp. D7]
          Length = 131

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          SG  I   G  G+GKTT I ++   L+    +V V     G      +R ++
Sbjct: 29 SGKIIGLLGPNGSGKTTLIKIINGLLKDYEGEVLV----DGKNVGIDSRKII 76


>gi|257784528|ref|YP_003179745.1| cytidylate kinase [Atopobium parvulum DSM 20469]
 gi|257473035|gb|ACV51154.1| cytidylate kinase [Atopobium parvulum DSM 20469]
          Length = 514

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + ++ +G  G+GK+T    L   L 
Sbjct: 1  MIVAIDGPAGSGKSTVARALSDRLN 25


>gi|227824776|ref|ZP_03989608.1| signal recognition particle protein [Acidaminococcus sp. D21]
 gi|226905275|gb|EEH91193.1| signal recognition particle protein [Acidaminococcus sp. D21]
          Length = 448

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 49/137 (35%), Gaps = 20/137 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT I  L  +L++      +       PAA     V+   L   V   G+E  
Sbjct: 108 GLQGAGKTTSIGKLANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKELDMPVFSMGSEVS 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                         + + A+     LLCD    +       R       +D L+ I    
Sbjct: 168 P-----------VTIAQEAIKRANALLCD----TVLIDTAGRLHIDEKLMDELKNI-KSA 211

Query: 128 VMPDCTIILDLPVDIGL 144
           V PD  I+L +    G 
Sbjct: 212 VHPD-EILLVVDAMTGQ 227


>gi|183598353|ref|ZP_02959846.1| hypothetical protein PROSTU_01745 [Providencia stuartii ATCC 25827]
 gi|188020529|gb|EDU58569.1| hypothetical protein PROSTU_01745 [Providencia stuartii ATCC 25827]
          Length = 702

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVH 36
            +G FI   G  G+GK+T   LL+R ++ +    + 
Sbjct: 489 KAGEFIGITGPSGSGKSTLTKLLQRLYIPQHGQVIV 524


>gi|170583401|ref|XP_001896563.1| hypothetical protein Bm1_25520 [Brugia malayi]
 gi|158596207|gb|EDP34598.1| hypothetical protein Bm1_25520 [Brugia malayi]
          Length = 4346

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 14   GAGKTTHISLLKRFLQRKNYDVHVTRE 40
            G+GK+T IS+L   L +K + +H+T E
Sbjct: 1689 GSGKSTAISILASLLGKKLHTIHLTSE 1715


>gi|160902528|ref|YP_001568109.1| dephospho-CoA kinase [Petrotoga mobilis SJ95]
 gi|160360172|gb|ABX31786.1| dephospho-CoA kinase [Petrotoga mobilis SJ95]
          Length = 193

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 50/170 (29%), Gaps = 42/170 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRK---------NYDVHVTREPGGTPAAEAARHVLL 55
           + I   G  G+GK+T   ++K   + K          ++V                 +  
Sbjct: 1   MVIGITGPAGSGKSTISKIIKTIYKDKASIIDVDRLGHEVLTYFFIKEKLKENFGEEIFD 60

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIRPAL------------MEGKILLCDRFLDSSY 103
                      E +     +L+ +  ++ P +             +  I++ D       
Sbjct: 61  DDNNISRSKLGEIVFSNQEKLELLNQIVHPEILNKTEQILKEISNKNDIIIID------- 113

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153
                      + LD L          D  I +D P ++ ++R+  +  +
Sbjct: 114 -----AALLFKIGLDKLC---------DKIIYVDAPEELRIERLSEKRGI 149


>gi|118351025|ref|XP_001008791.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
           thermophila]
 gi|89290558|gb|EAR88546.1| SRP54-type protein, GTPase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 618

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 29/143 (20%)

Query: 3   SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            G    I+F G+ G GK+T+++ +    +++ + V           A A   +       
Sbjct: 409 KGKPYIITFIGVNGVGKSTNLAKVAYLFKKEGFSVMFAA--CDNFRAGAVEQIKTHGRCL 466

Query: 61  EFG-------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           E          E   I F A R    + V         +LL D            R    
Sbjct: 467 EIPVFDRGYKDEPADIAFQAIREAQAKKV--------DVLLID---------TAGRMQDN 509

Query: 114 HLFLDSLQEISVQEVMPDCTIIL 136
              +  L  + VQ   PD  + +
Sbjct: 510 EPLMKQLSTLVVQN-NPDLIVFI 531


>gi|85375561|ref|YP_459623.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Erythrobacter litoralis HTCC2594]
 gi|84788644|gb|ABC64826.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase
           [Erythrobacter litoralis HTCC2594]
          Length = 647

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + +++ L   N                     LL       G   + 
Sbjct: 482 FTGLSGSGKSTIANEVEKKLALMNRHTF-----------------LLDGDNIRHGLNKDL 524

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +     G I+L         A+     + + +  + L     
Sbjct: 525 GFTETDRIENIRRIGEVAKLMADAGLIVLT--------AFISPFRAERRMVREML--PEG 574

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           + +     + +D P+++   R
Sbjct: 575 EFIE----VFVDTPLEVAEAR 591


>gi|51948506|ref|NP_001004266.1| adenylate kinase 8 [Rattus norvegicus]
 gi|81890778|sp|Q68FP8|KAD8_RAT RecName: Full=Adenylate kinase 8
 gi|51260838|gb|AAH79446.1| HypB, AroK, ADK and rho factor domain containing protein RGD1303144
           [Rattus norvegicus]
 gi|149039177|gb|EDL93397.1| HypB, AroK, ADK and rho factor domain containing protein
           RGD1303144, isoform CRA_a [Rattus norvegicus]
          Length = 479

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 33/202 (16%)

Query: 47  AEAARHVLLSCGVDEFGAEAEAIVFAAARLDH-VENVIRPALMEGKIL---LCDRFLDSS 102
            +  +  LLS            ++  A   +  + ++I P   +   +   +  R L   
Sbjct: 280 GKKLQAALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPFFEKRMTVPDSIITRVLTER 339

Query: 103 YAYQ-----GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
              Q     G         LD  + ++     P+    L++P+D  L+R+  R +   + 
Sbjct: 340 LKQQDCIQKGWVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDSILERLTLRRTDPVTG 399

Query: 158 CLDYF----------ERKDVMIHE-KRRQIFLDIA-----------RNQPDRCHIVDSAH 195
             + F          E +  ++   K  + ++ +                DR  IV+   
Sbjct: 400 --ERFHLMYKPPPTIEVQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYDRAIIVNGDQ 457

Query: 196 SFQSVATNILNIVWELVQKRVS 217
              +V   I + +   + ++V+
Sbjct: 458 DPYTVFEYIESGIINPLPRKVT 479


>gi|84386187|ref|ZP_00989216.1| putative ATP-binding component of ABC transporter [Vibrio
          splendidus 12B01]
 gi|84378957|gb|EAP95811.1| putative ATP-binding component of ABC transporter [Vibrio
          splendidus 12B01]
          Length = 339

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+  G  G GK+T +  L 
Sbjct: 28 KGEFITLLGPSGCGKSTLLRSLA 50


>gi|126464405|ref|YP_001045518.1| LAO/AO transport system ATPase [Rhodobacter sphaeroides ATCC 17029]
 gi|126106216|gb|ABN78746.1| LAO/AO transport system ATPase [Rhodobacter sphaeroides ATCC 17029]
          Length = 323

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAAR--HVLLSCG 58
           G+ G+GK+T +S L R L      V V          GG+   +  R   ++L   
Sbjct: 58  GVPGSGKSTMVSKLVRKLLDAGERVAVVAIDPSSPYSGGSILGDRIRMSDLVLDPN 113


>gi|327441219|dbj|BAK17584.1| ABC-type spermidine/putrescine transport systems, ATPase
          component [Solibacillus silvestris StLB046]
          Length = 366

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT + ++  F +    DV  
Sbjct: 31 RGKFYTLLGPSGCGKTTILRIIAGFTEASTGDVFF 65


>gi|297172255|gb|ADI23233.1| hypothetical protein [uncultured nuHF2 cluster bacterium
           HF0770_13K08]
          Length = 457

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 32/161 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  +    +++   V +    G T  A A   ++      E+   A+  +
Sbjct: 263 GVNGVGKTTTIGKIAAQYRQQGKKVLM--GAGDTFRAAAIEQLV------EWSKRADCDI 314

Query: 71  F--------AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
                    +A   + V+  I     +  +++CD            R  ++   ++ L++
Sbjct: 315 IQKEPGSDPSAVMYETVQKGID---EDYDVVICD---------TAGRLHTKKNLMEELKK 362

Query: 123 I--SVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACL 159
           +   +++++PD    I+L L    G   +       E+  L
Sbjct: 363 MVRVIRKLIPDAPHEILLVLDATTGQNAIFQTREFMEATDL 403


>gi|332161009|ref|YP_004297586.1| putative ABC transporter ATP-binding protein [Yersinia
          enterocolitica subsp. palearctica 105.5R(r)]
 gi|318604881|emb|CBY26379.1| ABC transporter multidrug efflux pump, fused ATP-binding domains
          [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325665239|gb|ADZ41883.1| putative ABC transporter ATP-binding protein [Yersinia
          enterocolitica subsp. palearctica 105.5R(r)]
          Length = 583

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|317123077|ref|YP_004103080.1| adenylate kinase [Thermaerobacter marianensis DSM 12885]
 gi|315593057|gb|ADU52353.1| Adenylate kinase [Thermaerobacter marianensis DSM 12885]
          Length = 216

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 65/234 (27%), Gaps = 62/234 (26%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARHVLLSCGVD 60
           F G  GAGK T  + L +   R       T        RE  GTP    A+   +  G  
Sbjct: 5   FLGPPGAGKGTQAARLAQ---RAGVPQIATGDMFRAAVRE--GTPLGLQAKR-YMDAGQL 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   +V         E + +P    G   L D F  +    +G +D    L +   
Sbjct: 59  VPDDVTLGLV--------RERLSQPDCRAGF--LLDGFPRTVAQAEGLKDVLAGLGV--- 105

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY----F 162
                  +  D  +  D+P  + ++R+  R                 R     D      
Sbjct: 106 ------GL--DGVLYFDVPDAVVVERLSGRRVCPACGATYHVRFDPPRVEGRCDRCGAEL 157

Query: 163 ERKDVMIHEKRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207
            ++     E  RQ    +            +    H V +      V   I  I
Sbjct: 158 VQRPDDREETVRQRLAVYRRQTEPLVNYYREAGLLHTVAADRPIDQVEAEIARI 211


>gi|317061190|ref|ZP_07925675.1| cell division protein ftsY [Fusobacterium sp. D12]
 gi|313686866|gb|EFS23701.1| cell division protein ftsY [Fusobacterium sp. D12]
          Length = 350

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 10/65 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G+ G GKTT I  +   L+++   V +    G T  A A   +      +E+   
Sbjct: 153 LIV--GVNGVGKTTTIGKIAAKLKKEGKKVIL--GAGDTFRAAAVEQL------EEWARR 202

Query: 66  AEAIV 70
           +EA +
Sbjct: 203 SEAEL 207


>gi|310780499|ref|YP_003968831.1| LAO/AO transport system ATPase [Ilyobacter polytropus DSM 2926]
 gi|309749822|gb|ADO84483.1| LAO/AO transport system ATPase [Ilyobacter polytropus DSM 2926]
          Length = 312

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 6/55 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGV 59
           G  GAGK+T    L +  +   + V  +  +P     GG    +  R   L+   
Sbjct: 51  GPPGAGKSTLTDKLVKVCRAAGHKVGVIAVDPTSPFTGGAILGDRIRMSDLNTDP 105


>gi|307704045|ref|ZP_07640976.1| excinuclease ABC, A subunit [Streptococcus mitis SK597]
 gi|307622396|gb|EFO01402.1| excinuclease ABC, A subunit [Streptococcus mitis SK597]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|307708040|ref|ZP_07644509.1| excinuclease ABC, A subunit [Streptococcus mitis NCTC 12261]
 gi|307615930|gb|EFN95134.1| excinuclease ABC, A subunit [Streptococcus mitis NCTC 12261]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|306828760|ref|ZP_07461952.1| excision endonuclease subunit UvrA [Streptococcus mitis ATCC 6249]
 gi|304428938|gb|EFM32026.1| excision endonuclease subunit UvrA [Streptococcus mitis ATCC 6249]
          Length = 952

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|297571914|ref|YP_003697688.1| adenylate kinase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932261|gb|ADH93069.1| adenylate kinase [Arcanobacterium haemolyticum DSM 20595]
          Length = 194

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 70/219 (31%), Gaps = 53/219 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-------EAARHVLLSCGVDEFG 63
           G  GAGK T  + + + L         T E      A       EA R++  S G     
Sbjct: 9   GPPGAGKGTQATTVSQQL---GIPAISTGEIFRAEIANKSDIGLEAQRYI--SEGNLVPD 63

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +                 ++R  L     +   L D +  +               +D+L
Sbjct: 64  SVT-------------NEIVRRRLARPDAVNGFLLDGYPRT------------LEQIDAL 98

Query: 121 QE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           +  ++   +  D  + +++P +    R+  R  +         +    +I  +  +++ D
Sbjct: 99  EAMLAEDGLSIDAMVDIEIPDEEVEGRLLKRAEIEG-----RADDTPEVIAHRV-KVYHD 152

Query: 180 I------ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
                  A    ++   +D   + + V   I+  V E +
Sbjct: 153 ATEPIIGAFRDRNKLITIDGMGTIEEVRERIVTAVKERL 191


>gi|293365929|ref|ZP_06612632.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus oralis ATCC 35037]
 gi|307702332|ref|ZP_07639290.1| ABC transporter family protein [Streptococcus oralis ATCC 35037]
 gi|291315607|gb|EFE56057.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Streptococcus oralis ATCC 35037]
 gi|307624135|gb|EFO03114.1| ABC transporter family protein [Streptococcus oralis ATCC 35037]
          Length = 231

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 12/89 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL----- 54
           +++G  +   G  G+GKTT I L+   LQ  K     +      +PA +A    L     
Sbjct: 26  ISAGKIVGLLGPNGSGKTTLIKLINGLLQPDKGR--VLINGLDPSPATKAIVSYLPDTTY 83

Query: 55  LSCGVDEFGAEAEAIVFAAA----RLDHV 79
           L+  +    A      F       R  H+
Sbjct: 84  LNEEMKVKDALTYFKTFYQDFNLERAQHL 112


>gi|289168752|ref|YP_003447021.1| excinuclease ABC-subunit A [Streptococcus mitis B6]
 gi|288908319|emb|CBJ23161.1| excinuclease ABC-subunit A [Streptococcus mitis B6]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINGILKKAIAQKLNRN 666


>gi|270291974|ref|ZP_06198189.1| excinuclease ABC, subunit A [Streptococcus sp. M143]
 gi|270279502|gb|EFA25344.1| excinuclease ABC, subunit A [Streptococcus sp. M143]
          Length = 954

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|257459611|ref|ZP_05624720.1| ABC transporter, ATP-binding protein [Campylobacter gracilis
          RM3268]
 gi|257443036|gb|EEV18170.1| ABC transporter, ATP-binding protein [Campylobacter gracilis
          RM3268]
          Length = 625

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 5  LFISFEGIEGAGKTTHISLLK 25
            IS  G +GAGK+T + L+ 
Sbjct: 40 RLISLTGPDGAGKSTLLKLIC 60


>gi|229172161|ref|ZP_04299726.1| Adenylyl-sulfate kinase [Bacillus cereus MM3]
 gi|228611504|gb|EEK68761.1| Adenylyl-sulfate kinase [Bacillus cereus MM3]
          Length = 197

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 70/210 (33%), Gaps = 47/210 (22%)

Query: 6   FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           F+  F G+  +GK+T  + + R L  KN                   + +L       G 
Sbjct: 26  FVVWFTGLSASGKSTVANAVARKLFEKNIG-----------------NYVLDGDNVRHGL 68

Query: 65  EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
             +     + R++++     V +  + +G ++L         A+       +    D L 
Sbjct: 69  NKDLGFSESDRMENIRRIGEVAKLFVDQGTVVLT--------AFISPFRVDRKQVRDLL- 119

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
             +  E      + +  P++   KR   +   +++   D  E             + +  
Sbjct: 120 --AAGEF---IEVFVKCPIEECEKR-DPKGLYKKARQGDIKE------FTGVDSPYEEPE 167

Query: 182 RNQPDRCHIVDSAH-SFQSVATNILNIVWE 210
           + +     IV++   S +  A  I+  + E
Sbjct: 168 KAE----LIVETHKYSIEECAEQIVKYLQE 193


>gi|227822843|ref|YP_002826815.1| general secretion pathway protein E, GspE [Sinorhizobium fredii
           NGR234]
 gi|227341844|gb|ACP26062.1| general secretion pathway protein E, GspE [Sinorhizobium fredii
           NGR234]
          Length = 545

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           +G+ I   G  G+GKTT +  L + L ++   +    +P
Sbjct: 314 NGVLIV-TGPTGSGKTTTLYSLVKDLNKEGVKIFTIEDP 351


>gi|237809748|ref|YP_002894188.1| signal recognition particle-docking protein FtsY [Tolumonas auensis
           DSM 9187]
 gi|237502009|gb|ACQ94602.1| signal recognition particle-docking protein FtsY [Tolumonas auensis
           DSM 9187]
          Length = 435

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 237 GVNGVGKTTTIGKLAKHFQAQGKSVMLAA--GDTFRAAAVEQLQVWGQRNHIPVIAQH-- 292

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I+ A      IL+ D
Sbjct: 293 TGADSASVIFDAIQAAKSRNIDILIAD 319


>gi|212709781|ref|ZP_03317909.1| hypothetical protein PROVALCAL_00829 [Providencia alcalifaciens DSM
           30120]
 gi|212687592|gb|EEB47120.1| hypothetical protein PROVALCAL_00829 [Providencia alcalifaciens DSM
           30120]
          Length = 696

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + +G FI   G  G+GK+T   LL+R    ++  V V
Sbjct: 482 IKAGEFIGITGPSGSGKSTLTKLLQRLYVPQHGQVIV 518


>gi|169833621|ref|YP_001693723.1| excinuclease ABC subunit A [Streptococcus pneumoniae Hungary19A-6]
 gi|168996123|gb|ACA36735.1| excinuclease ABC, A subunit [Streptococcus pneumoniae Hungary19A-6]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|148996611|ref|ZP_01824329.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP11-BS70]
 gi|168576383|ref|ZP_02722266.1| excinuclease ABC, A subunit [Streptococcus pneumoniae MLV-016]
 gi|307066868|ref|YP_003875834.1| excinuclease ATPase subunit [Streptococcus pneumoniae AP200]
 gi|147757186|gb|EDK64225.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP11-BS70]
 gi|183577863|gb|EDT98391.1| excinuclease ABC, A subunit [Streptococcus pneumoniae MLV-016]
 gi|306408405|gb|ADM83832.1| Excinuclease ATPase subunit [Streptococcus pneumoniae AP200]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|111018658|ref|YP_701630.1| polyphosphate kinase [Rhodococcus jostii RHA1]
 gi|110818188|gb|ABG93472.1| possible polyphosphate kinase [Rhodococcus jostii RHA1]
          Length = 314

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 89  IIFEGRDAAGKGGAIKRFTEHLNPRGARVVALEKPTERERTQW----------------- 131

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I++ DR   
Sbjct: 132 ----YFQRYVQHLP-------AGGEIVMMDRSWY 154


>gi|21228668|ref|NP_634590.1| CODH nickel-insertion accessory protein [Methanosarcina mazei
          Go1]
 gi|20907171|gb|AAM32262.1| CODH nickel-insertion accessory protein [Methanosarcina mazei
          Go1]
          Length = 254

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVT 38
          G+GK+T  +LL + + R+ Y+V V 
Sbjct: 10 GSGKSTVTALLAKAMARRGYNVLVV 34


>gi|116626101|ref|YP_828257.1| LAO/AO transporter ATPase [Candidatus Solibacter usitatus
          Ellin6076]
 gi|116229263|gb|ABJ87972.1| LAO/AO transport system ATPase [Candidatus Solibacter usitatus
          Ellin6076]
          Length = 381

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 7  IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEAAR 51
          I    G  GAGK+T +  L   L+++   + +      +R  GG    +  R
Sbjct: 46 IVGITGPPGAGKSTLVDALAVELRKRGKTLAILAVDPSSRNTGGAILGDRIR 97


>gi|111658817|ref|ZP_01409448.1| hypothetical protein SpneT_02000115 [Streptococcus pneumoniae
           TIGR4]
          Length = 954

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|332076636|gb|EGI87098.1| excinuclease ABC, A subunit [Streptococcus pneumoniae GA17545]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|331267161|ref|YP_004326791.1| excinuclease ABC-subunit A, (ATPase subunit) [Streptococcus oralis
           Uo5]
 gi|326683833|emb|CBZ01451.1| excinuclease ABC-subunit A, (ATPase subunit) [Streptococcus oralis
           Uo5]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|325972577|ref|YP_004248768.1| sulfate-transporting ATPase [Spirochaeta sp. Buddy]
 gi|324027815|gb|ADY14574.1| Sulfate-transporting ATPase [Spirochaeta sp. Buddy]
          Length = 255

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 16/23 (69%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          ++G FI+  G  G+GKTT + L+
Sbjct: 31 HTGEFIALVGPNGSGKTTLLKLI 53


>gi|322377246|ref|ZP_08051738.1| excinuclease ABC subunit A [Streptococcus sp. M334]
 gi|321281959|gb|EFX58967.1| excinuclease ABC subunit A [Streptococcus sp. M334]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|322388587|ref|ZP_08062187.1| excision endonuclease subunit UvrA [Streptococcus infantis ATCC
           700779]
 gi|321140507|gb|EFX36012.1| excision endonuclease subunit UvrA [Streptococcus infantis ATCC
           700779]
          Length = 954

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|320539370|ref|ZP_08039039.1| fused Signal Recognition Particle (SRP) receptor: membrane binding
           protein/conserved protein [Serratia symbiotica str.
           Tucson]
 gi|320030495|gb|EFW12505.1| fused Signal Recognition Particle (SRP) receptor: membrane binding
           protein/conserved protein [Serratia symbiotica str.
           Tucson]
          Length = 440

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q K   V +    G T  A A   + +    +     A+   
Sbjct: 243 GVNGVGKTTTIGKLARQFQAKGKSVMLAA--GDTFRAAAVEQLQVWGERNRIPVVAQH-- 298

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + ++ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 299 TGADSASVIFDAVQAAKARGVDVL--------IADTAGRLQNKAHLMEELKKIV 344


>gi|319942805|ref|ZP_08017107.1| hypothetical protein HMPREF9464_02326 [Sutterella wadsworthensis
           3_1_45B]
 gi|319803615|gb|EFW00571.1| hypothetical protein HMPREF9464_02326 [Sutterella wadsworthensis
           3_1_45B]
          Length = 563

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 26/133 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G GKTT + +L  F +      R    V    +    P  E    +      DE   
Sbjct: 402 GPSGIGKTTLLRVLAGFSESFTGCIRCGGSVLWMPQTPYLPKGELFDALAYPKAPDELTD 461

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           E  A + + ARL H+ + +R +  +   +L               +  +   L +L  I+
Sbjct: 462 ERAAALLSKARLTHLTDKLRES-ADWSTVLS------------GGEVQRLSLLRAL--IA 506

Query: 125 VQEVMPDCTIILD 137
                PD  ++LD
Sbjct: 507 ----KPD-VLLLD 514


>gi|315612305|ref|ZP_07887219.1| excision endonuclease subunit UvrA [Streptococcus sanguinis ATCC
           49296]
 gi|315315698|gb|EFU63736.1| excision endonuclease subunit UvrA [Streptococcus sanguinis ATCC
           49296]
          Length = 954

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|307702665|ref|ZP_07639617.1| excinuclease ABC, A subunit [Streptococcus oralis ATCC 35037]
 gi|307623781|gb|EFO02766.1| excinuclease ABC, A subunit [Streptococcus oralis ATCC 35037]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|307709891|ref|ZP_07646338.1| excinuclease ABC, A subunit [Streptococcus mitis SK564]
 gi|307619262|gb|EFN98391.1| excinuclease ABC, A subunit [Streptococcus mitis SK564]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|303259242|ref|ZP_07345220.1| excinuclease ABC subunit A [Streptococcus pneumoniae SP-BS293]
 gi|303263325|ref|ZP_07349248.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS397]
 gi|302639660|gb|EFL70117.1| excinuclease ABC subunit A [Streptococcus pneumoniae SP-BS293]
 gi|302647098|gb|EFL77322.1| excinuclease ABC subunit A [Streptococcus pneumoniae BS397]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|293364368|ref|ZP_06611094.1| excision endonuclease subunit UvrA [Streptococcus oralis ATCC
           35037]
 gi|291317214|gb|EFE57641.1| excision endonuclease subunit UvrA [Streptococcus oralis ATCC
           35037]
          Length = 954

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|289770868|ref|ZP_06530246.1| ABC transporter ATP-binding component [Streptomyces lividans TK24]
 gi|289701067|gb|EFD68496.1| ABC transporter ATP-binding component [Streptomyces lividans TK24]
          Length = 315

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 59/192 (30%), Gaps = 23/192 (11%)

Query: 11  GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + +L   L       +   +DV               +H  L    +E G
Sbjct: 40  GPNGAGKTTLVRILSTLLRPDAGRVEVAGHDVVAEAYAVRLRIGLLGQHAALD---EELG 96

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 +F   RL H+      A  +  ++   RF  S    +     S       L   
Sbjct: 97  GRQNLEMF--GRLHHLGARRARARADELLV---RFGLSDTGRKPVGAYSGG-MRRRLDLA 150

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     P+  + LD     GL     R        +         +    +  +L+ A  
Sbjct: 151 ASLITEPE-VLFLD-EPTTGLD---PRGRAEVWDSVRSLVGAGTTVLLTTQ--YLEEADQ 203

Query: 184 QPDRCHIVDSAH 195
             DR  +VD+  
Sbjct: 204 LADRISVVDAGR 215


>gi|284007125|emb|CBA72401.1| ABC transporter, ATP-binding protein [Arsenophonus nasoniae]
          Length = 569

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 33 GPDGAGKTTLLRMLAGLLK 51


>gi|282855433|ref|ZP_06264754.1| cytidylate kinase [Pyramidobacter piscolens W5455]
 gi|282586729|gb|EFB91976.1| cytidylate kinase [Pyramidobacter piscolens W5455]
          Length = 221

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T   L+   L
Sbjct: 7  IAIDGPAGAGKSTVAKLVASKL 28


>gi|312194468|ref|YP_004014529.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Frankia sp.
           EuI1c]
 gi|311225804|gb|ADP78659.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Frankia sp.
           EuI1c]
          Length = 910

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 49/204 (24%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEF-- 62
            +   G+ G+GK+T                  T   P    +++  R ++     D+   
Sbjct: 28  LVVLVGVSGSGKSTFAR---------------THFAPTQVLSSDFCRGLVADDENDQAAT 72

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
           G   E + + A +           L  G++ + D     S A Q   + ++         
Sbjct: 73  GDAFEVLHYIAGKR----------LAAGRLTVVDATNVQSRARQPLVELARR-------- 114

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182
               +V+P   I+LDLP  + L R   R      A +   +R ++      R+    +AR
Sbjct: 115 ---HDVLP-VAIVLDLPEQVCLARNSARPDRDFGAAVIRRQRSEL------RRSMKGLAR 164

Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206
               R H++    S   VA   ++
Sbjct: 165 EGFRRVHVL---RSEAEVAAATIS 185


>gi|260756050|ref|ZP_05868398.1| sulfate adenylyltransferase [Brucella abortus bv. 6 str. 870]
 gi|260676158|gb|EEX62979.1| sulfate adenylyltransferase [Brucella abortus bv. 6 str. 870]
          Length = 573

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 396 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 438

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 439 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 489

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 490 FIE----IFIDTPIEECMAR 505


>gi|254881777|ref|ZP_05254487.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 4_3_47FAA]
 gi|254834570|gb|EET14879.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 4_3_47FAA]
          Length = 464

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTVLGPSGCGKTTLLRLIA 56


>gi|237649741|ref|ZP_04523993.1| excinuclease ABC subunit A [Streptococcus pneumoniae CCRI 1974]
 gi|237821439|ref|ZP_04597284.1| excinuclease ABC subunit A [Streptococcus pneumoniae CCRI 1974M2]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|297561799|ref|YP_003680773.1| hypothetical protein Ndas_2856 [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
 gi|296846247|gb|ADH68267.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
          dassonvillei DSM 43111]
          Length = 202

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 7/58 (12%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTRE---PGGT---PAAEAARHVLLSC 57
          ++ EG  GAGK+T    L+  L R+      +T E   PG       +E  R  +L+ 
Sbjct: 34 VAVEGRSGAGKSTVADALRAALVRRGEAAALLTMEDLYPGWRGLEEGSELLREWVLAP 91


>gi|227515306|ref|ZP_03945355.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum ATCC 14931]
 gi|227086320|gb|EEI21632.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum ATCC 14931]
          Length = 253

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 35/183 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHV 53
           +N G FI+  G  GAGK+T  +++   L            D+    + G T   +    V
Sbjct: 33  INPGDFITIVGTNGAGKSTLFNVIGGNLTADGGQLLHNGQDITHLSQEGRT---KFLARV 89

Query: 54  LLSCGVDEFGAEA--EAIVFAAARLD---HVENVIRPALMEGKILLCD-------RFLDS 101
                +         E ++ A  R      V   ++  L E K L+         R + +
Sbjct: 90  FQDPKLGTAPRMTVAENLLLAEKRGQARHLVFRRLKSRLTEFKTLVATMNNGLENRLMTA 149

Query: 102 SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRES 156
           + A  G +  +    + +L+        PD  ++LD     L        +         
Sbjct: 150 TGALSGGQRQALSFLMATLK-------RPDI-LLLDEHTAALDPHTSATLMAATDQRIRE 201

Query: 157 ACL 159
             L
Sbjct: 202 DKL 204


>gi|225853798|ref|YP_002735310.1| excinuclease ABC subunit A [Streptococcus pneumoniae JJA]
 gi|225723275|gb|ACO19128.1| excinuclease ABC, A subunit [Streptococcus pneumoniae JJA]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|183603382|ref|ZP_02714548.2| excinuclease ABC, A subunit [Streptococcus pneumoniae SP195]
 gi|183571319|gb|EDT91847.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP195]
          Length = 954

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|168483826|ref|ZP_02708778.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC1873-00]
 gi|172042912|gb|EDT50958.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC1873-00]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|167585026|ref|ZP_02377414.1| ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit
          [Burkholderia ubonensis Bu]
          Length = 265

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G FI+  G  G GK+T ++L+   L+  + +V V   P
Sbjct: 41 RGEFIAIVGPTGCGKSTTLNLITGLLKPASGEVRVMGRP 79


>gi|164426403|ref|XP_960955.2| hypothetical protein NCU04309 [Neurospora crassa OR74A]
 gi|157071323|gb|EAA31719.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 240

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          L I+  GI G+GKTT   +L R L 
Sbjct: 21 LLIAIAGIPGSGKTTLSQILARRLN 45


>gi|154148086|ref|YP_001405898.1| adenylate kinase [Campylobacter hominis ATCC BAA-381]
 gi|166980310|sp|A7I057|KAD_CAMHC RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|153804095|gb|ABS51102.1| adenylate kinase (ATP-AMP transphosphorylase) [Campylobacter
           hominis ATCC BAA-381]
          Length = 192

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 74/218 (33%), Gaps = 35/218 (16%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56
           M +   I   G  G+GKTT    + +  Q   +    D+        +   +    ++  
Sbjct: 1   MKNLFLII--GAPGSGKTTDAGCIAQMNQSVAHYSTGDLLRAEVAKDSELGKKIDKIISG 58

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
             +       E ++       H              ++ D +  S      E+ +     
Sbjct: 59  GNLVPL----EIVINTITSAIHACEK--------DFIIIDGYPRS-----VEQMTELDKV 101

Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV--MIHEKRR 174
           L +  +I++        I +++  ++  +RV  R    +     ++ R  V     E+ R
Sbjct: 102 LANEYDINLSA-----VIEVNVSEEVAKERVLGRARGADDNEEVFYNRMKVFVEPIEEIR 156

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212
           + +     N+    H ++   + + + T+I  I+ + +
Sbjct: 157 KFY-----NEKGIFHSINGERTIEEIVTDINAIIVKKI 189


>gi|148992766|ref|ZP_01822409.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP9-BS68]
 gi|147928492|gb|EDK79507.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP9-BS68]
 gi|332075857|gb|EGI86324.1| excinuclease ABC, A subunit [Streptococcus pneumoniae GA17570]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|148983587|ref|ZP_01816906.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP3-BS71]
 gi|147923734|gb|EDK74846.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP3-BS71]
 gi|301799341|emb|CBW31876.1| UvrABC system protein A (UvrA protein) [Streptococcus pneumoniae
           OXC141]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|148975376|ref|ZP_01812300.1| putative ATP-binding component of ABC transporter [Vibrionales
          bacterium SWAT-3]
 gi|145965300|gb|EDK30550.1| putative ATP-binding component of ABC transporter [Vibrionales
          bacterium SWAT-3]
          Length = 339

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+  G  G GK+T +  L 
Sbjct: 28 KGEFITLLGPSGCGKSTLLRSLA 50


>gi|148926764|ref|ZP_01810444.1| possible adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni CG8486]
 gi|145845128|gb|EDK22224.1| possible adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni CG8486]
          Length = 170

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
          + G    A+
Sbjct: 55 KQGRIDMAL 63


>gi|77459381|ref|YP_348888.1| ABC transporter-like [Pseudomonas fluorescens Pf0-1]
 gi|77383384|gb|ABA74897.1| putative ATP-binding component of ABC transporter [Pseudomonas
          fluorescens Pf0-1]
          Length = 282

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          G F+   G  G GK+T +  L   LQ   
Sbjct: 40 GQFVCILGPSGCGKSTLLGALAGHLQPHG 68


>gi|39995834|ref|NP_951785.1| hypothetical protein GSU0728 [Geobacter sulfurreducens PCA]
 gi|39982598|gb|AAR34058.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504848|gb|ADI83571.1| polyphosphate kinase [Geobacter sulfurreducens KN400]
          Length = 492

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 41/148 (27%), Gaps = 27/148 (18%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
            FEG + AGK   I  + + L  K Y V     P     A+      L            
Sbjct: 302 VFEGSDAAGKGGAIRRVTQALDAKIYRVVPIAAPTEDELAQP----YLWRFWRTIPRLGR 357

Query: 68  AIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             +F   R  +   +   +      G             AY    D  + L       I 
Sbjct: 358 FAIF--DRSWYGRVLVERVEGFCSRGDW---------MRAYSEINDFEEQLVE---SRIV 403

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYS 152
           V +        L +  +  L+R + R  
Sbjct: 404 VAK------FWLAISPEEQLRRFREREE 425


>gi|17986415|ref|NP_539049.1| signal recognition particle receptor FTSY [Brucella melitensis bv.
           1 str. 16M]
 gi|17982009|gb|AAL51313.1| signal recognition particle receptor ftsy [Brucella melitensis bv.
           1 str. 16M]
          Length = 314

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +  G+   +  
Sbjct: 118 GVNGTGKTTTIGKLAAKLTAGGLKVMLAA--GDTFRAAAIEQ--LHIWGERTGSPVVSSK 173

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A       +    A   G  +L    +D+       R  ++   +D L +I 
Sbjct: 174 LGADAAGLAYDAWEKAKEAGSDVLI---IDT-----AGRLQNKAELMDELAKIV 219


>gi|15900123|ref|NP_344727.1| excinuclease ABC subunit A [Streptococcus pneumoniae TIGR4]
 gi|15902215|ref|NP_357765.1| excinuclease ABC subunit A [Streptococcus pneumoniae R6]
 gi|116517125|ref|YP_815695.1| excinuclease ABC subunit A [Streptococcus pneumoniae D39]
 gi|149005938|ref|ZP_01829667.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP18-BS74]
 gi|307126411|ref|YP_003878442.1| excinuclease ABC subunit A [Streptococcus pneumoniae 670-6B]
 gi|54039836|sp|P63385|UVRA_STRR6 RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName:
           Full=Excinuclease ABC subunit A
 gi|54042343|sp|P63384|UVRA_STRPN RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName:
           Full=Excinuclease ABC subunit A
 gi|14971654|gb|AAK74367.1| excinuclease ABC, subunit A [Streptococcus pneumoniae TIGR4]
 gi|15457714|gb|AAK98975.1| Excinuclease ABC - subunit A [Streptococcus pneumoniae R6]
 gi|116077701|gb|ABJ55421.1| excinuclease ABC, A subunit [Streptococcus pneumoniae D39]
 gi|147762294|gb|EDK69255.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP18-BS74]
 gi|306483473|gb|ADM90342.1| excinuclease ABC, A subunit [Streptococcus pneumoniae 670-6B]
 gi|332077492|gb|EGI87953.1| excinuclease ABC, A subunit [Streptococcus pneumoniae GA41301]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|158315852|ref|YP_001508360.1| ABC transporter related [Frankia sp. EAN1pec]
 gi|158111257|gb|ABW13454.1| ABC transporter related [Frankia sp. EAN1pec]
          Length = 603

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
           G  GAGK+T +++L   L++         EP 
Sbjct: 414 GPNGAGKSTLLAVLAGRLEQAG-PALTPSEPT 444


>gi|116492592|ref|YP_804327.1| guanylate kinase [Pediococcus pentosaceus ATCC 25745]
 gi|116102742|gb|ABJ67885.1| guanylate kinase [Pediococcus pentosaceus ATCC 25745]
          Length = 204

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 27/170 (15%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-----HVTREPGGTPAAEAARHVLLS 56
             G+ I   G  G GK T    +     +   D        TR+P          + +  
Sbjct: 3   RRGMLIVLSGPSGVGKGTVRKAI---FDQGGNDFQYSISMTTRKPRKGEVDGEDYYFVSK 59

Query: 57  CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
              ++   E + + +      +V+N     L          +++ +      RD    + 
Sbjct: 60  EEFEKNIKEGQMLEY----AQYVDNYYGTPLK---------YVNQTL--DSGRDVFLEIE 104

Query: 117 LDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFER 164
           ++  ++  V+E MPD   +   P D     +R+ NR +          E+
Sbjct: 105 VNGARQ--VREKMPDGVFLFLTPPDLMELKQRIINRGTEDMDTINKRMEK 152


>gi|66820973|ref|XP_644025.1| uridine kinase [Dictyostelium discoideum AX4]
 gi|74933979|sp|Q8T154|UCKB_DICDI RecName: Full=Uridine-cytidine kinase B; AltName: Full=Cytidine
           monophosphokinase B; AltName: Full=Uridine
           monophosphokinase B
 gi|60472219|gb|EAL70172.1| uridine kinase [Dictyostelium discoideum AX4]
          Length = 243

 Score = 35.8 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 16/155 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G   +GKTT    + + L+ K     +  +    P ++  R  + S   D   A   ++V
Sbjct: 22  GGTASGKTTVCDEIMKRLENKRI-AIICLDSFYRPLSKEDRETVASYNFDHPDAFDWSLV 80

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSLQEISVQE 127
             A R           L +GK +    +   S++             +  + +     Q 
Sbjct: 81  ENALR----------DLKDGKDIEIPTYCFKSHSRLEETVGLGDVDVILFEGILSFYTQS 130

Query: 128 VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           +    D  I +D   D  L R   R        L+
Sbjct: 131 LREQMDIKIFVDTDSDTRLSRRVMRDIAERGRSLE 165


>gi|314966101|gb|EFT10200.1| signal recognition particle protein [Propionibacterium acnes
           HL082PA2]
 gi|315094952|gb|EFT66928.1| signal recognition particle protein [Propionibacterium acnes
           HL060PA1]
          Length = 528

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++ + + +
Sbjct: 107 GLQGAGKTTLAGKLAQWFKEEGH 129


>gi|306826011|ref|ZP_07459347.1| excision endonuclease subunit UvrA [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304431727|gb|EFM34707.1| excision endonuclease subunit UvrA [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 954

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 645 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 677


>gi|304436458|ref|ZP_07396432.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370504|gb|EFM24155.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 279

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFL 28
          +G FI+  G  G+GK+T    L   L
Sbjct: 36 TGAFIAILGANGSGKSTLARHLNALL 61


>gi|303238629|ref|ZP_07325162.1| guanylate kinase [Acetivibrio cellulolyticus CD2]
 gi|302593748|gb|EFL63463.1| guanylate kinase [Acetivibrio cellulolyticus CD2]
          Length = 207

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 26/167 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62
           GL +   G  G GK T +S +K   +   + V   TR P                  D  
Sbjct: 5   GLLVVVSGPSGTGKGTLLSNIKEREKNIRFSVSATTRSPRSGEIDGVNYFFKTHEEFDSM 64

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121
               E               ++          CD F  +      +   S    L  ++ 
Sbjct: 65  IKNNEL-----------VEWVKY---------CDNFYGTPKKCIEDTIKSGFDCLLEIEV 104

Query: 122 --EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER 164
              ++++++ PDC  I  LP   +   +R++ R + +        ++
Sbjct: 105 EGALNIKKIYPDCVSIFILPPSFEELRRRIEARGTEKAEVIDKRMDK 151


>gi|291556910|emb|CBL34027.1| signal recognition particle subunit FFH/SRP54 (srp54) [Eubacterium
           siraeum V10Sc8a]
          Length = 455

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 39/126 (30%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++GAGKTTH + L ++ +++N                  R +L++C +    A  +  V
Sbjct: 108 GLQGAGKTTHTAKLAKYFKKQNR-----------------RPLLVACDIYRPAAIDQLKV 150

Query: 71  FAAARLDHV------------ENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFL 117
             A+   HV            +  I+ A   G  +++ D            R       +
Sbjct: 151 VGASVDAHVFEMGQTNPVKIAKESIKYAKDNGFDVVILD---------TAGRLHIDEDLM 201

Query: 118 DSLQEI 123
           + L++I
Sbjct: 202 NELKDI 207


>gi|260460157|ref|ZP_05808409.1| sulfate adenylyltransferase, large subunit [Mesorhizobium
           opportunistum WSM2075]
 gi|259033802|gb|EEW35061.1| sulfate adenylyltransferase, large subunit [Mesorhizobium
           opportunistum WSM2075]
          Length = 645

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 42/141 (29%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L ++ L       +                 +L       G   + 
Sbjct: 468 FTGLSGSGKSTIANLFEKKLFATGRHTY-----------------ILDGDNVRHGLNRDL 510

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
               A R++    V  V +     G I++      S  +            +   + I  
Sbjct: 511 GFTDADRVENIRRVAEVAKLMADAGLIVIV-----SFISPFSAERRMARELMADGEFIE- 564

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   + +D P +   +R
Sbjct: 565 --------VFVDTPFEECARR 577


>gi|257452334|ref|ZP_05617633.1| Signal recognition particle receptor FtsY [Fusobacterium sp.
           3_1_5R]
          Length = 334

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            I   G+ G GKTT I  +   L+++   V +
Sbjct: 137 LIV--GVNGVGKTTTIGKIAAKLKKEGKKVVL 166


>gi|297562943|ref|YP_003681917.1| metallophosphoesterase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847391|gb|ADH69411.1| metallophosphoesterase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 864

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 71/212 (33%), Gaps = 47/212 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G+ G+GK+T      R              P    +++  R ++     D+    
Sbjct: 22  LVVLVGVSGSGKSTFA---ARHFA-----------PTQVISSDYCRGLVSDDENDQAA-- 65

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                  A     +  V+   L  G + + D    ++   +  R+  +    +++   + 
Sbjct: 66  ------TADAFSLLHTVVDIRLRRGLLAVVD---ATNVQSRARRELVRIAKDNNVLSTA- 115

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV--MIHEKRRQIFLDIARN 183
                   I+LD+P  +  +R ++R        +   +R+D+   +   RR+ F      
Sbjct: 116 --------IVLDVPEALARERNRDRPDRDFGDHVIRRQRRDLRQSLRHLRREGFRK---- 163

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                H++      + +   ++ +      +R
Sbjct: 164 ----VHVL---QGPEEIDAAVIELERAWPDRR 188


>gi|262195601|ref|YP_003266810.1| cytidylate kinase [Haliangium ochraceum DSM 14365]
 gi|262078948|gb|ACY14917.1| cytidylate kinase [Haliangium ochraceum DSM 14365]
          Length = 243

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          N  L ++ +G  GAGK+T    L R L
Sbjct: 5  NKALVVTIDGPAGAGKSTVAKRLARAL 31


>gi|227499867|ref|ZP_03929960.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Anaerococcus tetradius ATCC 35098]
 gi|227217976|gb|EEI83249.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Anaerococcus tetradius ATCC 35098]
          Length = 366

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT ++++  F+++ + DV +
Sbjct: 30 KGKFYTLLGPSGCGKTTILNIIAGFVEQTSGDVFI 64


>gi|225174835|ref|ZP_03728832.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
 gi|225169475|gb|EEG78272.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
          Length = 424

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV 53
          G F+   G  G+GKTT + +L R L      V ++ RE  G    E A+ +
Sbjct: 28 GSFVGIIGPNGSGKTTLLKVLSRILAPSGGSVLLSGRELAGFAQNELAKTM 78


>gi|238597878|ref|XP_002394453.1| hypothetical protein MPER_05657 [Moniliophthora perniciosa FA553]
 gi|215463497|gb|EEB95383.1| hypothetical protein MPER_05657 [Moniliophthora perniciosa FA553]
          Length = 352

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 7/90 (7%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARH-----VLLSCGVDEFG 63
           G+ G GKTT I+ + + L      V +T              +      +L    VD+  
Sbjct: 255 GMPGTGKTTVIAAVIKTLVEMGKTVLLTSYTHSAVDTILMKLKDGSEFGILRLGNVDKVH 314

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKIL 93
            +      +A R       +   LM   ++
Sbjct: 315 PDVRRFTLSARRQATTVEQLEHQLMTPPVV 344


>gi|209696302|ref|YP_002264233.1| cell division protein FtsY [Aliivibrio salmonicida LFI1238]
 gi|208010256|emb|CAQ80587.1| cell division protein FtsY [Aliivibrio salmonicida LFI1238]
          Length = 410

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q     V +    G T  A A   + +    ++    A+   
Sbjct: 213 GVNGVGKTTTIGKLAKQFQNDGKSVILAA--GDTFRAAAVEQLQVWGQRNDVPVIAQH-- 268

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I  A      +++ D
Sbjct: 269 TGADSASVIYDAIEAAKARKVDVVIAD 295


>gi|163735514|ref|ZP_02142946.1| ABC transporter, ATP-binding protein, putative [Roseobacter
          litoralis Och 149]
 gi|161391134|gb|EDQ15471.1| ABC transporter, ATP-binding protein, putative [Roseobacter
          litoralis Och 149]
          Length = 239

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          G F +  G  GAGK+T ISLL R L   + D+
Sbjct: 30 GRFCALLGPNGAGKSTLISLLTRLLVASHGDI 61


>gi|157164895|ref|YP_001466421.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter concisus 13826]
 gi|112801657|gb|EAT99001.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter concisus 13826]
          Length = 159

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR-EPGG 43
          I+F G   +GKTT I  + +        V V + +PG 
Sbjct: 6  IAFSGPSNSGKTTLILKVAKKFIDDGLKVVVVKHDPGD 43


>gi|94994416|ref|YP_602514.1| Multidrug/protein/lipid ABC transporter family, ATP-binding and
           permease protein [Streptococcus pyogenes MGAS10750]
 gi|94547924|gb|ABF37970.1| Multidrug/protein/lipid ABC transporter family, ATP-binding and
           permease protein [Streptococcus pyogenes MGAS10750]
          Length = 575

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|71903510|ref|YP_280313.1| multidrug resistance ABC transporter ATP-binding and permease
           protein [Streptococcus pyogenes MGAS6180]
 gi|71802605|gb|AAX71958.1| multidrug resistance ABC transporter ATP-binding and permease
           protein [Streptococcus pyogenes MGAS6180]
          Length = 575

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|267440|sp|P29811|CYSC2_PSEAE RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS
           kinase; AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|45265|emb|CAA39183.1| unnamed protein product [Pseudomonas aeruginosa]
 gi|738296|prf||1924369A adenosine phosphosulfate kinase
          Length = 214

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 40/143 (27%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAE 65
           F G+ GAGKTT    L+  L+ +   +            +  R  L   L    ++    
Sbjct: 11  FTGLSGAGKTTIAVALENQLRARGIRI-------ERLDGDTVRQSLTKDLGFSKEDRDKN 63

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEI 123
            E + F A             L    + +      SS+   Y   RD  +    + ++  
Sbjct: 64  IERVTFVA-----------KLLSRNNVAVL-----SSFISPYAATRDHVRGETTNFIE-- 105

Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146
                     + +D P++  ++R
Sbjct: 106 ----------VFVDAPLETCIER 118


>gi|238788770|ref|ZP_04632561.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          frederiksenii ATCC 33641]
 gi|238723075|gb|EEQ14724.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          frederiksenii ATCC 33641]
          Length = 583

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|57505472|ref|ZP_00371400.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase,
          putative [Campylobacter upsaliensis RM3195]
 gi|57016297|gb|EAL53083.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase,
          putative [Campylobacter upsaliensis RM3195]
          Length = 174

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 7/61 (11%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G  I F G+ G+GK+     L   L+ K  +V            +  R +L   G D+ 
Sbjct: 6  KGGVIWFSGLAGSGKSFLAEALCEKLRTKLRNVIYL-------DGDELRELLGHFGYDKA 58

Query: 63 G 63
           
Sbjct: 59 S 59


>gi|327328022|gb|EGE69791.1| signal recognition particle protein [Propionibacterium acnes
           HL103PA1]
          Length = 528

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++ + + +
Sbjct: 107 GLQGAGKTTLAGKLAQWFKEEGH 129


>gi|322704435|gb|EFY96030.1| ankyrin repeat protein [Metarhizium anisopliae ARSEF 23]
          Length = 1853

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 7/52 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLL 55
           GI GAGKTT  +++   L++                      A +  + +L 
Sbjct: 406 GIPGAGKTTLSAMVIDHLEKSFQGDTTIGLAYIYFNFRSDHKAGDLIKSLLK 457


>gi|314923933|gb|EFS87764.1| signal recognition particle protein [Propionibacterium acnes
           HL001PA1]
          Length = 528

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++ + + +
Sbjct: 107 GLQGAGKTTLAGKLAQWFKEEGH 129


>gi|310779012|ref|YP_003967345.1| shikimate kinase [Ilyobacter polytropus DSM 2926]
 gi|309748335|gb|ADO82997.1| shikimate kinase [Ilyobacter polytropus DSM 2926]
          Length = 171

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 39/153 (25%)

Query: 14  GAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+GKTT    L + L+ K  D+      +E      ++    +    G            
Sbjct: 12  GSGKTTVGRQLAKALEMKFVDIDKLIAAKE------SKNISEIFSEKGEG---------- 55

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               RL+  +N++     +  +++            G      +  + +L++ S      
Sbjct: 56  -YFRRLE--KNIVIEESKDNNVIIST----------GGGVIIDNDNIKNLRKTSF----- 97

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
              + LD  ++    RV+ R +       + FE
Sbjct: 98  --VVFLDCDIECIYNRVKRRKNRPLLNVENMFE 128


>gi|307322532|ref|ZP_07601878.1| spermidine/putrescine ABC transporter ATPase subunit
          [Sinorhizobium meliloti AK83]
 gi|306891814|gb|EFN22654.1| spermidine/putrescine ABC transporter ATPase subunit
          [Sinorhizobium meliloti AK83]
          Length = 356

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G F++F G  G+GKTT + ++ 
Sbjct: 30 GEFVTFLGPSGSGKTTALKMIA 51


>gi|297620933|ref|YP_003709070.1| Signal recognition 54 kDa protein Ffh [Waddlia chondrophila WSU
           86-1044]
 gi|297376234|gb|ADI38064.1| Signal recognition 54 kDa protein Ffh [Waddlia chondrophila WSU
           86-1044]
          Length = 442

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++G+GKTT  + L  +L+++  
Sbjct: 106 GLQGSGKTTQCAKLANYLKKQKK 128


>gi|268326010|emb|CBH39598.1| probable molybdopterin-guanine dinucleotide biosynthesis protein
          B [uncultured archaeon]
          Length = 141

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 15 AGKTTHISLLKRFLQRKNYDVHVTRE 40
          +GKTT I  L ++L+   Y +   + 
Sbjct: 13 SGKTTLIEKLIKWLKNDGYKIVTIKN 38


>gi|257463638|ref|ZP_05628029.1| Signal recognition particle receptor FtsY [Fusobacterium sp. D12]
          Length = 347

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 10/65 (15%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G+ G GKTT I  +   L+++   V +    G T  A A   +      +E+   
Sbjct: 150 LIV--GVNGVGKTTTIGKIAAKLKKEGKKVIL--GAGDTFRAAAVEQL------EEWARR 199

Query: 66  AEAIV 70
           +EA +
Sbjct: 200 SEAEL 204


>gi|227876348|ref|ZP_03994460.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35243]
 gi|269975912|ref|ZP_06182916.1| phosphonates import ATP-binding protein PhnC 1 [Mobiluncus mulieris
           28-1]
 gi|306817240|ref|ZP_07450986.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35239]
 gi|227842889|gb|EEJ53086.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35243]
 gi|269935740|gb|EEZ92270.1| phosphonates import ATP-binding protein PhnC 1 [Mobiluncus mulieris
           28-1]
 gi|304649920|gb|EFM47199.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus mulieris ATCC 35239]
          Length = 281

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLK-RFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56
           ++G FI+  G  GAGK+T ++++    L         +  VTR P    AA   R V   
Sbjct: 52  SAGDFITIVGGNGAGKSTLLNVIAGSILADSGRVKIDETDVTRLPEEDRAAMIGR-VFQD 110

Query: 57  CGVDEFGAEA--EAIVFAAARLD 77
                       E ++ A+ R +
Sbjct: 111 PKQGTAPRMTVAENLLLASKRGE 133


>gi|194014405|ref|ZP_03053022.1| signal recognition particle-docking protein FtsY [Bacillus pumilus
           ATCC 7061]
 gi|194013431|gb|EDW22996.1| signal recognition particle-docking protein FtsY [Bacillus pumilus
           ATCC 7061]
          Length = 328

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I F G+ G GKTT I  L   L+     V +    G T  A A   +
Sbjct: 123 ILFVGVNGVGKTTTIGKLANKLKNDGKSVILAA--GDTFRAGAIEQL 167


>gi|229918441|ref|YP_002887087.1| uridine kinase [Exiguobacterium sp. AT1b]
 gi|229469870|gb|ACQ71642.1| uridine kinase [Exiguobacterium sp. AT1b]
          Length = 211

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 52/160 (32%), Gaps = 26/160 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GKTT    L      +   V +  +       +         +     F  + + 
Sbjct: 12  GGTGSGKTTVARALVDAF--QGQSVVMIEQDAYYKDQSEMTMEERYKTNYDHPFAFDNDL 69

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--------SL 120
           ++    +L   + + +P             +    A+    ++     +D        +L
Sbjct: 70  LIEHIQQLQQHQAIEKP-------------VYDYAAHTRSSETILIEPVDVVIVEGILAL 116

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           ++  ++++M D  + +D   D+ + R   R        +D
Sbjct: 117 EDARLRDLM-DIKVFVDTDADVRILRRMQRDLNERGRSID 155


>gi|160947508|ref|ZP_02094675.1| hypothetical protein PEPMIC_01442 [Parvimonas micra ATCC 33270]
 gi|158446642|gb|EDP23637.1| hypothetical protein PEPMIC_01442 [Parvimonas micra ATCC 33270]
          Length = 326

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 56/157 (35%), Gaps = 22/157 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L    + K  +V +        AA        +       +  E   
Sbjct: 132 GVNGVGKTTSIGKLANKFKSKGKNVMLVAADTFRAAATEQLTEWANRSGVPIISNEE--- 188

Query: 71  FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS--VQE 127
             A     V + I+ A  +   +L+CD            R  ++   ++ L +I+  +  
Sbjct: 189 -GADPASVVYDGIQSAKSKNIDVLICD---------TAGRLHNKKNLMNELNKIARVIDR 238

Query: 128 VMP----DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             P    + T++LD     G   +      R++A +D
Sbjct: 239 EYPEANKEVTLVLDAT--TGQNAIVQAKEFRDTANID 273


>gi|149017877|ref|ZP_01834336.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP23-BS72]
 gi|168486042|ref|ZP_02710550.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC1087-00]
 gi|147931441|gb|EDK82419.1| excinuclease ABC, A subunit [Streptococcus pneumoniae SP23-BS72]
 gi|183570879|gb|EDT91407.1| excinuclease ABC, A subunit [Streptococcus pneumoniae CDC1087-00]
          Length = 943

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRK 31
           G FI+  G+ G+GK+T I       + + L R 
Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKAIAQKLNRN 666


>gi|89899106|ref|YP_521577.1| ABC transporter-like protein [Rhodoferax ferrireducens T118]
 gi|89343843|gb|ABD68046.1| ABC transporter related [Rhodoferax ferrireducens T118]
          Length = 268

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 17/144 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQ-RKNYDV-----HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  GAGKTT I+LL   LQ      V       T  P         R   ++   D    
Sbjct: 38  GPNGAGKTTLINLLTGVLQPTSGKIVLEGQDITTLAPYQRVRRGMVRTFQINQLFDTLTP 97

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKIL------LCDRFLDSSYAYQGERDSSQHLFLD 118
             E +    ++   + N    AL   + +      L ++F  ++   Q  R  +      
Sbjct: 98  L-ETLAMVVSQQQGLGNKWWQALGANQRVTERCEQLLEQFHLTAVMTQPTRVLAYGK--R 154

Query: 119 SLQEISVQ-EVMPDCTIILDLPVD 141
            L EI++     P   ++LD PV 
Sbjct: 155 RLLEIAIALACEP-RVLLLDEPVA 177


>gi|83592621|ref|YP_426373.1| WD-40 repeat-containing protein [Rhodospirillum rubrum ATCC 11170]
 gi|83575535|gb|ABC22086.1| WD-40 repeat [Rhodospirillum rubrum ATCC 11170]
          Length = 1491

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 5   LFISFEGIEGAGKTTHISL-LKRFLQRKNYDVHVTREPGGTP---AAEAARHVLLSCGVD 60
             ++  G  G+GK++  +  +  + +++N+ V   R PG  P    +EA   V+      
Sbjct: 261 RLVALVGASGSGKSSLANAGVAEYYRQRNWRVVSFR-PGLAPLRNLSEAIFEVIEEGETV 319

Query: 61  EFGAEA----EAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
               +     E+++      D   + I  A  +G +++ D+F
Sbjct: 320 LSRLQTVSYWESLLKRGMLRDAF-DCINRAGADGTLVIVDQF 360


>gi|28210500|ref|NP_781444.1| ferric enterobactin transport ATP-binding protein fepC [Clostridium
           tetani E88]
 gi|28202937|gb|AAO35381.1| ferric enterobactin transport ATP-binding protein fepC [Clostridium
           tetani E88]
          Length = 285

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 16/100 (16%)

Query: 7   ISFE--------GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           ISFE        G  G+GKTT +  + + L  K+  +++      T      + +     
Sbjct: 29  ISFERNKFHSILGPNGSGKTTLLKNILKTLPAKDKTIYIDNFDINTY---KNKDLAKKMS 85

Query: 59  VDEFGAEAEAIVFAAA-----RLDHVENVIRPALMEGKIL 93
                   E    +       R  H++   R +  + +I+
Sbjct: 86  SVPQNTNLEFDFTSFDVVLMGRSPHLKRFERESKKDYEIV 125


>gi|15807275|ref|NP_296005.1| manganese ABC transporter ATP-binding protein [Deinococcus
          radiodurans R1]
 gi|6460091|gb|AAF11830.1|AE002060_9 manganese ABC transporter, ATP-binding protein, putative
          [Deinococcus radiodurans R1]
          Length = 239

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
          +G F +  G  GAGK+T +  L   L    Y+  VT +PG +P
Sbjct: 26 AGQFTAVIGPNGAGKSTLLRALAGLLTD--YEGRVTFDPGHSP 66


>gi|37526130|ref|NP_929474.1| hypothetical protein plu2216 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785560|emb|CAE14509.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 459

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 8/76 (10%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKR-------FLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +SG  I+  G  G GK+T +  LK        +L   +  V            +  R  L
Sbjct: 350 SSGR-ITIRGPNGVGKSTFLCWLKEQLGESAYYLPAHHELVFEKTNERNLSTGQELREFL 408

Query: 55  LSCGVDEFGAEAEAIV 70
               V         ++
Sbjct: 409 KEISVKAVDKIEILML 424


>gi|28950170|emb|CAD71038.1| conserved hypothetical protein [Neurospora crassa]
          Length = 244

 Score = 35.8 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          L I+  GI G+GKTT   +L R L 
Sbjct: 25 LLIAIAGIPGSGKTTLSQILARRLN 49


>gi|330430300|gb|AEC21634.1| ABC transporter protein [Pusillimonas sp. T7-7]
          Length = 244

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 28/80 (35%), Gaps = 8/80 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT +++L   LQ     V      GG          L   G+           
Sbjct: 36  GPNGSGKTTLLNVLSGHLQADGGSVQF----GGADVLGLKPAQLAGRGILRMFQMTRVF- 90

Query: 71  FAAARLDHVENVIRPALMEG 90
               R+   +N+I   L +G
Sbjct: 91  ---NRISAFDNLIVSGLAQG 107


>gi|319641205|ref|ZP_07995906.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 3_1_40A]
 gi|317387179|gb|EFV68057.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 3_1_40A]
          Length = 462

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 KKGEFVTVLGPSGCGKTTLLRLIA 54


>gi|319780141|ref|YP_004139617.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166029|gb|ADV09567.1| ABC transporter related protein [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
          Length = 370

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI F G  G GK+T +  + 
Sbjct: 26 IKSGEFIVFVGPSGCGKSTLLRSIA 50


>gi|315609126|ref|ZP_07884095.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315249196|gb|EFU29216.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 209

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNY 33
          ++  + I   G  G+GKTT  S +    +L+   Y
Sbjct: 5  LHKPVLIVIAGPNGSGKTTITSKILHHEWLEDAVY 39


>gi|317058877|ref|ZP_07923362.1| cell division protein ftsY [Fusobacterium sp. 3_1_5R]
 gi|313684553|gb|EFS21388.1| cell division protein ftsY [Fusobacterium sp. 3_1_5R]
          Length = 337

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            I   G+ G GKTT I  +   L+++   V +
Sbjct: 140 LIV--GVNGVGKTTTIGKIAAKLKKEGKKVVL 169


>gi|317132414|ref|YP_004091728.1| cytidylate kinase [Ethanoligenens harbinense YUAN-3]
 gi|315470393|gb|ADU26997.1| cytidylate kinase [Ethanoligenens harbinense YUAN-3]
          Length = 221

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T   +L   L
Sbjct: 4  IAIDGPAGAGKSTLSRMLADRL 25


>gi|269963203|ref|ZP_06177538.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832167|gb|EEZ86291.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 282

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  GAGK+T I LL    +  + +V+V   P    +A+  + +     +     ++
Sbjct: 53  IAIVGPSGAGKSTLIELLFGLRKPTSGEVYVCGYPLSRSSAKQRQELCQHIQLIPQEPQS 112

Query: 67  EAIVFAAARLDHVE 80
               +   R   +E
Sbjct: 113 SLNPYYTVRQILLE 126


>gi|260463195|ref|ZP_05811397.1| ABC transporter related protein [Mesorhizobium opportunistum
          WSM2075]
 gi|259031045|gb|EEW32319.1| ABC transporter related protein [Mesorhizobium opportunistum
          WSM2075]
          Length = 370

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG FI F G  G GK+T +  + 
Sbjct: 26 IKSGEFIVFVGPSGCGKSTLLRSIA 50


>gi|302895715|ref|XP_003046738.1| hypothetical protein NECHADRAFT_91240 [Nectria haematococca mpVI
           77-13-4]
 gi|256727665|gb|EEU41025.1| hypothetical protein NECHADRAFT_91240 [Nectria haematococca mpVI
           77-13-4]
          Length = 1157

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           +  G F++F G  G GK+T I+LL+RF
Sbjct: 927 IKKGQFVAFVGASGCGKSTMIALLERF 953


>gi|239986766|ref|ZP_04707430.1| putative ABC transporter ATP-binding protein [Streptomyces
           roseosporus NRRL 11379]
          Length = 744

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G+GK+T +  L  +      DV           AE  + + L    D    E
Sbjct: 208 LIAVIGPSGSGKSTLLKALTGYRPANQGDVLYDNRNLYKQFAELRQRIGLVPQDDILHKE 267

Query: 66  ---AEAIVFAA 73
               +A+ +AA
Sbjct: 268 LTVTKALKYAA 278


>gi|212692968|ref|ZP_03301096.1| hypothetical protein BACDOR_02469 [Bacteroides dorei DSM 17855]
 gi|237725632|ref|ZP_04556113.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. D4]
 gi|265753455|ref|ZP_06088810.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 3_1_33FAA]
 gi|212664437|gb|EEB25009.1| hypothetical protein BACDOR_02469 [Bacteroides dorei DSM 17855]
 gi|229436319|gb|EEO46396.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          dorei 5_1_36/D4]
 gi|263235169|gb|EEZ20693.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          sp. 3_1_33FAA]
          Length = 464

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 33 KKGEFVTVLGPSGCGKTTLLRLIA 56


>gi|209527268|ref|ZP_03275779.1| Guanylate kinase [Arthrospira maxima CS-328]
 gi|209492335|gb|EDZ92679.1| Guanylate kinase [Arthrospira maxima CS-328]
          Length = 184

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 26/174 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
            +G  I   G  G GK T I  L +   + +  V   TR P            +      
Sbjct: 5   KTGQLIVITGPSGVGKGTIIRSLLQKYPQLHLSVSVTTRSPRPGEVHGKDYFFVTRDRFQ 64

Query: 61  EFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +   + E +    FA          ++  + +G+ +L                  +    
Sbjct: 65  QMVQQQELLEWAEFAGNFYGTPRLAVQDKIQQGENVLL---------------EIELEGA 109

Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169
             + +   Q +     I + LP        R++NR +  + A     +R    I
Sbjct: 110 RQISQTFPQALR----IFI-LPPSLQELENRLRNRATDSQEAIARRIQRAKTEI 158


>gi|297735514|emb|CBI17954.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 15/99 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKR--FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M  G+        GAGK+T +  +L    +       V +  E      ++     L S 
Sbjct: 183 MGGGM--------GAGKSTVLKDILAEPLWSGAAGNAVII--EADAFKESDVIYKALSSR 232

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           G  +    AE  +   +  D   +++  AL EG+ ++ D
Sbjct: 233 GHHDMLQTAE--LVHQSSTDAASSLLVTALNEGRDVIMD 269


>gi|156938032|ref|YP_001435828.1| ATPase [Ignicoccus hospitalis KIN4/I]
 gi|156567016|gb|ABU82421.1| Nucleotide binding protein, PINc [Ignicoccus hospitalis KIN4/I]
          Length = 504

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 11/63 (17%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G+ I+  G  GAGKTT    L  +  RK   V     P         R ++L   V ++ 
Sbjct: 252 GILIA--GAPGAGKTTFAQALTEYYARKGKVVKTIESP---------RDMVLPPSVTQYS 300

Query: 64  AEA 66
            E 
Sbjct: 301 KEH 303


>gi|156935063|ref|YP_001438979.1| hypothetical protein ESA_02914 [Cronobacter sakazakii ATCC BAA-894]
 gi|166988289|sp|A7MLV5|AROL_ENTS8 RecName: Full=Shikimate kinase 2; Short=SK 2
 gi|156533317|gb|ABU78143.1| hypothetical protein ESA_02914 [Cronobacter sakazakii ATCC BAA-894]
          Length = 174

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FLDIARNQPDRCH 189
             I L++PV++  +R++      +   L      +++      R   + + A       H
Sbjct: 96  VVIYLNVPVEVLAQRLEAFPEAGQRPTLTGKPVTEEIADVLAVRDALYRECAH------H 149

Query: 190 IVDSAHSFQSVATNILNIVW 209
           ++D+A +   + + I++ + 
Sbjct: 150 VIDAADAPAVIVSRIIDALQ 169


>gi|146337368|ref|YP_001202416.1| dephospho-CoA kinase [Bradyrhizobium sp. ORS278]
 gi|146190174|emb|CAL74166.1| Dephospho-CoA kinase [Bradyrhizobium sp. ORS278]
          Length = 201

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 71/223 (31%), Gaps = 54/223 (24%)

Query: 11  GIEGA---GKTTHISLLKRF--------------LQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ G+   GK+T   L                   + +         PG T   +  R  
Sbjct: 7   GLTGSMGMGKSTTAKLFAEAGVPVYDADATVHKVYEGEAAPAVEAAFPGTTVDGKVDRSK 66

Query: 54  LLSC--GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111
           L +   G  E     EAIV    R  H                   FLD     Q E+  
Sbjct: 67  LSAKVVGNPEAIRRLEAIVHPMLRSYHQA-----------------FLD-----QAEQSG 104

Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                +D             D  +++    +I  +R+  R ++ E+A      R+     
Sbjct: 105 VPVAVVDVPLLFETGGDKRVDAVVVVSTSPEIQRQRILARGTMTEAALDALLARQMPDAE 164

Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           +++R  F            +VD++H    V   I +I+ E+V+
Sbjct: 165 KRQRADF------------VVDTSHGLDPVRARIRDILAEVVK 195


>gi|22652528|gb|AAN03740.1|AF456245_1 NBS-LRR-like protein [Oryza sativa Japonica Group]
          Length = 900

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAE 65
           I+  GI G GKTT ++ +    ++ N+  H       T   EA  R +L   G  E   +
Sbjct: 197 ITVSGIGGLGKTTLVTNVYER-EKVNFAAHAWIVVSQTYNVEALLRKLLRKIGSTELSLD 255

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           +   +      D  E + +       +++ D
Sbjct: 256 S---LNNMDAHDLKEEINKKIEDSKCLIVLD 283


>gi|22788778|ref|NP_690490.1| deoxynucleotide kinase [Heliothis zea virus 1]
 gi|22671538|gb|AAN04365.1|AF451898_70 deoxynucleotide kinase [Heliothis zea virus 1]
          Length = 274

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 15/89 (16%)

Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-----K 165
                L SL E+ +  V  D  + +     + ++R   R  + ES   L Y E+     +
Sbjct: 142 LNADVLKSLCEVLIDSVRIDLIVYMRTDPSVAMERTIRRGRMEESHIELPYLEKLHELHE 201

Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSA 194
           D +IH K         +  P    +VD+ 
Sbjct: 202 DWLIHGK---------KPIPAPVLVVDAN 221


>gi|68250249|ref|YP_249361.1| cytidylate kinase [Haemophilus influenzae 86-028NP]
 gi|68058448|gb|AAX88701.1| cytidylate kinase [Haemophilus influenzae 86-028NP]
          Length = 264

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 43 GMIITVDGPSGAGKGTLCYALAEKL 67


>gi|57242366|ref|ZP_00370305.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter upsaliensis RM3195]
 gi|57017046|gb|EAL53828.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter upsaliensis RM3195]
          Length = 165

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 8  SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          +F G   +GKTT I  L +   +K   V V +
Sbjct: 7  AFSGPSNSGKTTLIEKLTQHFMQKGLKVLVIK 38


>gi|186685397|ref|YP_001868593.1| carbohydrate kinase [Nostoc punctiforme PCC 73102]
 gi|8572241|gb|AAF77059.1|AF266466_1 putative hexuronic acid kinase HrmK [Nostoc punctiforme]
 gi|186467849|gb|ACC83650.1| carbohydrate kinase HrmK, thermoresistant glucokinase family
           [Nostoc punctiforme PCC 73102]
          Length = 169

 Score = 35.8 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 63/211 (29%), Gaps = 49/211 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+ G+GKTT   LL   L  +  D      P      +  R  +          
Sbjct: 1   MIIIVMGVSGSGKTTIGKLLADSLSWEFSDADSFHSPENV---DKMRRGI---------P 48

Query: 65  EAEAIVFAAARL---DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---D 118
             E     A R+     ++  I+  L E K ++         A    +DS +   +   D
Sbjct: 49  LTE-----ADRMPWLQDLQTAIKHWLQENKNVV--------LACSALKDSYRQFLVSDSD 95

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
                    +     + L    ++   R+Q R +   S  L                 F 
Sbjct: 96  RCTNAKSDRIK---LVYLKGSYELIQMRLQERSNHYMSEKL-------------LNSQFD 139

Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
            +   +P     +D A   Q +  NI   + 
Sbjct: 140 TL--EEPLDTISIDVAQPPQIIVQNIRTALR 168


>gi|313896220|ref|ZP_07829773.1| signal recognition particle protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975019|gb|EFR40481.1| signal recognition particle protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 458

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 53/150 (35%), Gaps = 15/150 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT    L   L+++     +  +    PAA     V+         ++ +   
Sbjct: 108 GLQGSGKTTSAGKLALMLKKQGKRPLLVADDIYRPAAIKQLEVIGEKVGAPVFSQGQEDA 167

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            A AR     ++   A     +++ D            R       +  L++I    V P
Sbjct: 168 VAIARA----SIAYSAAHANDVVIID---------TAGRLQIDETLMQELRDI-KAAVQP 213

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
              I+L +    G + V    +   S  LD
Sbjct: 214 H-EILLVVDAMTGQEAVNVAAAFDASLGLD 242


>gi|307309395|ref|ZP_07589054.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
 gi|306900125|gb|EFN30744.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
          Length = 370

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F+ F G  G GK+T + L+   +     DV +
Sbjct: 29 GEFVVFVGPSGCGKSTLLRLIAGLVPVSGGDVFI 62


>gi|282899971|ref|ZP_06307932.1| Adenylate kinase, subfamily [Cylindrospermopsis raciborskii CS-505]
 gi|281195241|gb|EFA70177.1| Adenylate kinase, subfamily [Cylindrospermopsis raciborskii CS-505]
          Length = 187

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 47/212 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G  GAGK T   +L  FLQ                  +  R  +        G +A+ 
Sbjct: 6   FLGPPGAGKGTQAKVLADFLQ-----------VPHISTGDILRQAITDQ--TALGVKAQE 52

Query: 69  IVFAAARL------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
            +     +      D VE  ++ +  +   +L D F          R  SQ +FL +L +
Sbjct: 53  YMDKGDLVPDQLVQDMVEERLQKSDAQKGWIL-DGF---------PRTVSQAVFLGNLLD 102

Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD--- 179
               +      + LD P +I + R+  R            + +DV+ H     ++     
Sbjct: 103 RIQGDSE--RVVNLDAPDEIVVSRLLGRGRKD--------DSEDVIRHR--LNVYRRDTA 150

Query: 180 -IARNQPDR--CHIVDSAHSFQSVATNILNIV 208
            + +   DR     V+   S + V + +   +
Sbjct: 151 PLIQYYGDRQKLLTVNGNQSQEEVTSALKMAI 182


>gi|290955585|ref|YP_003486767.1| hypothetical protein SCAB_10221 [Streptomyces scabiei 87.22]
 gi|260645111|emb|CBG68197.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 501

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 65/208 (31%), Gaps = 46/208 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA-EAI 69
           G+ G+GK+T    L   L      +          +++  R  L     +     A E  
Sbjct: 307 GLPGSGKSTLSGALADRL---GVTLL---------SSDRLRKELAGIPPESPAPAAYEEG 354

Query: 70  VF----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           ++     A   D + +     L  G+ ++ D    ++++    R ++  +   +  ++  
Sbjct: 355 LYTPEWTARTYDILLDRAAALLSRGESVVLD----ATWSAAELRAAAGRVAERTCADLVA 410

Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185
                       +P ++   R+  R      A L                    +A  +P
Sbjct: 411 LHCQ--------VPDEVAAARLSTRSPGPSDADLG------------VADA---LAAREP 447

Query: 186 DR--CHIVDSAHSFQSVATNILNIVWEL 211
                 +VD++   +S  +  L  V   
Sbjct: 448 PWPDAVVVDTSGPLESAVSRALAAVRPW 475


>gi|229490281|ref|ZP_04384123.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC
          [Rhodococcus erythropolis SK121]
 gi|229322813|gb|EEN88592.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC
          [Rhodococcus erythropolis SK121]
          Length = 364

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI   G  G+GK+T + +L 
Sbjct: 28 IKDGEFIVLVGPSGSGKSTALRMLA 52


>gi|229172652|ref|ZP_04300210.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus MM3]
 gi|228610784|gb|EEK68048.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus MM3]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|295840011|ref|ZP_06826944.1| ATP/GTP-binding protein [Streptomyces sp. SPB74]
 gi|197699809|gb|EDY46742.1| ATP/GTP-binding protein [Streptomyces sp. SPB74]
          Length = 198

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 15/144 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G GKTT +  +      +  +V    +R        E  R   ++          E 
Sbjct: 20  GGFGVGKTTLVGAVSEIRPLRTEEVLTEASRPVDDMRGVEHKRTTTVAMDFGRITLREEL 79

Query: 69  IVFAA------ARLDHVENVIRPALMEGKILLCD--RFLDSSYAYQGERDSSQHLFLDSL 120
           +++              + + + AL  G ++L D  R  DS  A           F+ ++
Sbjct: 80  VLYLFGTPGQDRFWFLWDELAQGAL--GAVVLVDTRRLADSFAAVDYFERR-GIPFVVAV 136

Query: 121 QEI--SVQEVMPDCTIILDLPVDI 142
                +    +PD    LDL   +
Sbjct: 137 NRFDGADDHPLPDIRAALDLDPHV 160


>gi|189014388|gb|ACD69430.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014396|gb|ACD69434.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014398|gb|ACD69435.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014400|gb|ACD69436.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014412|gb|ACD69442.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014416|gb|ACD69444.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014418|gb|ACD69445.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014424|gb|ACD69448.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014432|gb|ACD69452.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014436|gb|ACD69454.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014440|gb|ACD69456.1| gualynate kinase-1 [Gryllus firmus]
          Length = 199

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
          I   G  G+GK+T +  L      K  + V H TR+P
Sbjct: 9  IVVCGPSGSGKSTLLRRLFEEFPDKFGFSVSHTTRQP 45


>gi|159041088|ref|YP_001540340.1| ABC transporter related [Caldivirga maquilingensis IC-167]
 gi|157919923|gb|ABW01350.1| ABC transporter related [Caldivirga maquilingensis IC-167]
          Length = 345

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          MN+G +    G  G+GK+T I ++ 
Sbjct: 26 MNNGTYNVIMGPTGSGKSTLIKVIA 50


>gi|148655366|ref|YP_001275571.1| adenylate kinase [Roseiflexus sp. RS-1]
 gi|148567476|gb|ABQ89621.1| Adenylate kinase [Roseiflexus sp. RS-1]
          Length = 224

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 69/244 (28%), Gaps = 54/244 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQ------------------RKNYDVHVTREPG 42
           M + L I   G  GAGK+T    L   L                   R   +V    E G
Sbjct: 1   MTAALNIVLLGPPGAGKSTIAEELVHQLPLVPISTGALLRAEIGARTRIGREVAPLLERG 60

Query: 43  GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102
                      +L   ++    +   ++    R       +   L +     CDR L   
Sbjct: 61  DLAPDSLMDR-VLRARLETLDPDEGILLDGYPRTMRQALGLAAMLAD-----CDRTLHMV 114

Query: 103 YAYQGERDSSQHLFLDSL--QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            A     + S    +  L  + I      P     + +     + R + R         D
Sbjct: 115 IAI----EVSDEEVVRRLGGRRICEGAGEP---FPVHIDDLASIMRCRERGGRLVQRDDD 167

Query: 161 YFE---RKDVMIHEKRR--------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
             E   ++ +  H++          Q  L            +D A +   VA   L ++ 
Sbjct: 168 RPEIVRQRLIAYHQQTAPLIAYYAGQGLL----------RRIDGAGAPADVARRALAVIG 217

Query: 210 ELVQ 213
           E ++
Sbjct: 218 EELR 221


>gi|111219363|ref|XP_646596.2| hypothetical protein DDB_G0270168 [Dictyostelium discoideum AX4]
 gi|90970892|gb|EAL72434.2| hypothetical protein DDB_G0270168 [Dictyostelium discoideum AX4]
          Length = 227

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 60/182 (32%), Gaps = 45/182 (24%)

Query: 5   LFIS---FEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCG 58
             I+    +G  G+GKT     L ++  +  + V        P  +   ++     L+  
Sbjct: 9   KLITVLCLKGCHGSGKT----ELCKYFSKVGFTVLDEAFLDMPTFSIPNQS-----LTME 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVI-----------------RPALMEGKILLCDRFLDS 101
                   + ++    +++ +EN                   +      K+ + DR   S
Sbjct: 60  TVWVSNWFQRLL----KMELIENSNNNNNNNNNKNNNNHNINKFDNQHHKVFIADRSPFS 115

Query: 102 SYAY-QGERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156
           +  Y Q        +  + ++E+    ++       T+ L +  D+  +R+Q R   +  
Sbjct: 116 AILYSQNNGHYLDPIISEQIKELKKYTNIDI----KTVYLRVEKDVLWERIQKRLQEQPE 171

Query: 157 AC 158
             
Sbjct: 172 RK 173


>gi|85708680|ref|ZP_01039746.1| bifunctional enzyme 2-C-methyl-D-erythritol
           4-phosphatecytidylyltransferase and
           2-C-methyl-D-erythritol [Erythrobacter sp. NAP1]
 gi|85690214|gb|EAQ30217.1| bifunctional enzyme 2-C-methyl-D-erythritol
           4-phosphatecytidylyltransferase and
           2-C-methyl-D-erythritol [Erythrobacter sp. NAP1]
          Length = 386

 Score = 35.4 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 2/52 (3%)

Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS--FQSVATNILNIVWE 210
            FE       +  R     +A   P +  I D+A       V   +L  + E
Sbjct: 78  RFEEGGASRQDSVRAGLEALAEEPPAKVLIHDAARPDLPLEVIQRLLAALDE 129


>gi|326382888|ref|ZP_08204578.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Gordonia neofelifaecis NRRL B-59395]
 gi|326198478|gb|EGD55662.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Gordonia neofelifaecis NRRL B-59395]
          Length = 616

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 19/85 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    ++R L       +                 LL       G  ++   
Sbjct: 451 GLSGSGKSTVAVEVERRLVASGTPAY-----------------LLDGDNLRLGLNSDLGF 493

Query: 71  FAAARLDHVENV--IRPALMEGKIL 93
            +  R ++V  V  +   L +  ++
Sbjct: 494 TSTDRAENVRRVGEVAKILADAGVV 518


>gi|323703062|ref|ZP_08114717.1| cytidylate kinase [Desulfotomaculum nigrificans DSM 574]
 gi|323531956|gb|EGB21840.1| cytidylate kinase [Desulfotomaculum nigrificans DSM 574]
          Length = 221

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 83/238 (34%), Gaps = 50/238 (21%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   ++ +G  GAGK+T   L+ R L     D                R V L    +
Sbjct: 1   MRNKTCVAIDGPAGAGKSTVAKLVARQLGLLYID-----------TGAMYRAVTLKALRE 49

Query: 61  EFG-AEAEAIVFAAAR--LDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGER 109
                + E +   A R  ++ V    +  L++G+ +        +  R + S  A   + 
Sbjct: 50  GLDLTDHEQLTALARRTKIELVPGAKQLVLLDGEDVTEEIRSPEVS-RHV-SLVA---KV 104

Query: 110 DSSQHLFLDSLQEISVQE------------VMP--DCTIILDLPVDIGLKRVQNRYSLRE 155
              + + ++  + ++ +             V+P  D  I L    +    R + +    +
Sbjct: 105 PGVRAILVEQQRRMASETGVVMDGRDIGTVVLPQADIKIFLTASAEERANR-RAKELANK 163

Query: 156 SACLDYF----ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIV 208
              +D      E ++    +  R++   +A        I+DS+  S   V   I+ ++
Sbjct: 164 GYTIDIAKLIKEIEERDYIDSHREVSPLVAAADA---TIIDSSNLSIDEVVKEIIKLI 218


>gi|302550120|ref|ZP_07302462.1| guanylate kinase [Streptomyces viridochromogenes DSM 40736]
 gi|302467738|gb|EFL30831.1| guanylate kinase [Streptomyces viridochromogenes DSM 40736]
          Length = 197

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 78/214 (36%), Gaps = 53/214 (24%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSCGVDEF 62
              G  G GK+T ++     +++++ +V +     TR+P            +    +D+ 
Sbjct: 21  VLSGPSGVGKSTVVA----HMRKEHPEVWLSVSATTRKPRPGEKHGVHYFFVTDDEMDKL 76

Query: 63  GAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            A  E +    FA  R       ++  L +G+ +L +         QG R   +      
Sbjct: 77  IANGELLEWAEFAGNRYGTPRAAVQERLEKGEPVLLE------IDLQGARLVRES----- 125

Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
                    MP+  ++   P   +  ++R+  R +       +  ER       + R   
Sbjct: 126 ---------MPEAQLVFLAPPSWEELVRRLTGRGT----EPPEVIER-------RLRAAK 165

Query: 178 LDIARNQPDRCHIVDSAH---SFQSVATNILNIV 208
           +++A  +P+     D+     S + VA  +L +V
Sbjct: 166 IELAA-EPE----FDTTLVNTSVEDVARELLALV 194


>gi|282854588|ref|ZP_06263923.1| signal recognition particle protein [Propionibacterium acnes J139]
 gi|282582170|gb|EFB87552.1| signal recognition particle protein [Propionibacterium acnes J139]
 gi|314981873|gb|EFT25966.1| signal recognition particle protein [Propionibacterium acnes
           HL110PA3]
 gi|315090705|gb|EFT62681.1| signal recognition particle protein [Propionibacterium acnes
           HL110PA4]
          Length = 528

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++ + + +
Sbjct: 107 GLQGAGKTTLAGKLAQWFKEEGH 129


>gi|238794071|ref|ZP_04637688.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          intermedia ATCC 29909]
 gi|238726576|gb|EEQ18113.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          intermedia ATCC 29909]
          Length = 574

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 33 GPDGAGKTTLLRMLAGLLK 51


>gi|228998104|ref|ZP_04157703.1| ABC transporter ATP-binding protein [Bacillus mycoides Rock3-17]
 gi|229005597|ref|ZP_04163302.1| ABC transporter ATP-binding protein [Bacillus mycoides Rock1-4]
 gi|228755629|gb|EEM04969.1| ABC transporter ATP-binding protein [Bacillus mycoides Rock1-4]
 gi|228761639|gb|EEM10586.1| ABC transporter ATP-binding protein [Bacillus mycoides Rock3-17]
          Length = 539

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT 44
          + G FI   G  G GKTT +   K+ L             G +
Sbjct: 18 SQGEFIVLAGGSGCGKTTLLKHFKKELLPIGKRTGSMYYNGTS 60


>gi|221194839|ref|ZP_03567896.1| bifunctional pantoate ligase/cytidylate kinase [Atopobium rimae
          ATCC 49626]
 gi|221185743|gb|EEE18133.1| bifunctional pantoate ligase/cytidylate kinase [Atopobium rimae
          ATCC 49626]
          Length = 516

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQ 29
          + ++ +G  G+GK+T    L + L 
Sbjct: 1  MIVAIDGPAGSGKSTVARALSQRLN 25


>gi|189014430|gb|ACD69451.1| gualynate kinase-1 [Gryllus firmus]
          Length = 199

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
          I   G  G+GK+T +  L      K  + V H TR+P
Sbjct: 9  IVVCGPSGSGKSTLLRRLFEEFPDKFGFSVSHTTRQP 45


>gi|161621449|ref|NP_105708.2| putative fructose transport system kinase [Mesorhizobium loti
           MAFF303099]
          Length = 211

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 16/167 (9%)

Query: 2   NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
            +  FI    G  G+GK+T  + L   L     +V              AR +       
Sbjct: 25  KAKRFIVAIAGPPGSGKSTLSAGLHDLLPEGAVEVVPMDGFHYDDIVLNARGL----RAR 80

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +   E     F  A  + +   IR    +  I + DR ++ S A      +     L   
Sbjct: 81  KGAPET----FDFAGFETLMKRIRAGEPDIAIPVFDRSMELSRAAAAIVRTETKFILVEG 136

Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160
             + + E     + P  D +I +D+P +   +R+  R+     +  +
Sbjct: 137 NYLLLDEEPWSRLSPLFDFSIFVDVPRNELERRLMERWHGHGRSDEE 183


>gi|163734899|ref|ZP_02142336.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Roseobacter litoralis Och 149]
 gi|161391681|gb|EDQ16013.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Roseobacter litoralis Och 149]
          Length = 359

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G F+   G  G GK+T + ++ 
Sbjct: 29 GKFVVLLGPSGCGKSTLLRMIA 50


>gi|149371256|ref|ZP_01890742.1| signal recognition particle-docking protein FtsY [unidentified
           eubacterium SCB49]
 gi|149355394|gb|EDM43953.1| signal recognition particle-docking protein FtsY [unidentified
           eubacterium SCB49]
          Length = 318

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L     +  + V +
Sbjct: 124 GVNGAGKTTTIGKLAHQFSKAGHKVVL 150


>gi|160902561|ref|YP_001568142.1| ABC transporter related [Petrotoga mobilis SJ95]
 gi|160360205|gb|ABX31819.1| ABC transporter related [Petrotoga mobilis SJ95]
          Length = 242

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G F++  G  GAGKTT + +L
Sbjct: 29 IKKGEFVTIIGPNGAGKTTLLKVL 52


>gi|153005170|ref|YP_001379495.1| cytidylate kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152028743|gb|ABS26511.1| cytidylate kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 237

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 1  MNSGL-FIS-FEGIEGAGKTTHISLLKRFL 28
          M +G  FI   +G  GAGK+T    +   L
Sbjct: 1  MTAGRPFIVAIDGPAGAGKSTVSRRVASRL 30


>gi|150378144|ref|YP_001314739.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Sinorhizobium medicae WSM419]
 gi|150032691|gb|ABR64806.1| sulfate adenylyltransferase, large subunit [Sinorhizobium medicae
           WSM419]
          Length = 633

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + L R L  +    +                 LL       G   + 
Sbjct: 465 FTGLSGSGKSTIANELDRILHAQGKHTY-----------------LLDGDNVRHGLNRDL 507

Query: 69  IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++    V  V +     G I+L      S  +   +        ++  + I  
Sbjct: 508 GFTEEDRVENIRRVAEVAKLMADAGLIVLV-----SFISPFRDERRMARELMEEGEFIE- 561

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
                   I +D P++   +R
Sbjct: 562 --------IFVDTPLEECARR 574


>gi|61365690|gb|AAX42747.1| adenylate kinase 1 [synthetic construct]
          Length = 195

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 63/218 (28%), Gaps = 48/218 (22%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGV 59
           F+   G  G+GK T    + +   +  Y    T +        G+   +    ++     
Sbjct: 12  FVV--GGPGSGKGTQCEKIVQ---KYGYTHLSTGDLLRSEVSSGSATGKKLSEIM---EK 63

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119
            +       +      +    N  +  L++G                          +  
Sbjct: 64  GQLVPLETVLDMLRDAMVAKVNTSKGFLIDGY----------------------PREVQQ 101

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            +E   +   P   + +D   +   +R+  R     S  +D  E       +KR + +  
Sbjct: 102 GEEFERRIGQPTLLLYVDAGPETMTQRLLKRGET--SGRVDDNE----ETIKKRLETYYK 155

Query: 180 -----IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
                IA  +       V++  S  SV + +   +  L
Sbjct: 156 ATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDAL 193


>gi|81429417|ref|YP_396418.1| deoxyguanosine kinase [Lactobacillus sakei subsp. sakei 23K]
 gi|78611060|emb|CAI56113.1| Deoxyguanosine kinase [Lactobacillus sakei subsp. sakei 23K]
          Length = 220

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 62/210 (29%), Gaps = 48/210 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VF 71
           GAGKT+    L   L     +                   +L     +    A  +   F
Sbjct: 11  GAGKTSLTKYLSDHL---GTEAFYESVDDNE---------VLPLFYKDPTKYAFLLQIYF 58

Query: 72  AAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHLFLDSL 120
              R D ++             + DR  F DS           A   E      L  + +
Sbjct: 59  LNKRFDSIKQAYTDDNN-----ILDRSIFEDSLLFHLNADLGRATATEVRVYDELLANMM 113

Query: 121 QE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY----FERKDVMIHEKRR 174
           QE   +  +  PD  I + +  +  L R+Q R    E    D     + ++    ++   
Sbjct: 114 QELPFAAHKKRPDLLIHVRVSFETMLSRIQKRGRSYEQLEADPTLYDYYKELNSRYDAWY 173

Query: 175 QIF------------LDIARNQPDRCHIVD 192
             +            LD   N+ DR  ++D
Sbjct: 174 DTYDESPKMQIDGDVLDFVENEADRKKVID 203


>gi|32490939|ref|NP_871193.1| hypothetical protein WGLp190 [Wigglesworthia glossinidia
          endosymbiont of Glossina brevipalpis]
 gi|25166145|dbj|BAC24336.1| gltL [Wigglesworthia glossinidia endosymbiont of Glossina
          brevipalpis]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          + SG  I   G  G+GK+T I L+ +     + ++ V   P         R +
Sbjct: 36 IKSGEIIVICGPSGSGKSTLIRLINKLEMFDSGEIFVYGNPISNLKGHKLRIL 88


>gi|327398231|ref|YP_004339100.1| adenylyl-sulfate kinase [Hippea maritima DSM 10411]
 gi|327180860|gb|AEA33041.1| Adenylyl-sulfate kinase [Hippea maritima DSM 10411]
          Length = 222

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +    I   G+ G+GK+T  + L+  L R    VH                 LL      
Sbjct: 48  HKPCIIWLTGLSGSGKSTIANALEEKLNRM--HVHT---------------YLLDGDNIR 90

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +       R +++     V +  +  G I++ 
Sbjct: 91  HGLNKDLGFSIEDRKENIRRISEVAKLFVDAGLIVIT 127


>gi|319937166|ref|ZP_08011573.1| ABC transporter [Coprobacillus sp. 29_1]
 gi|319807532|gb|EFW04125.1| ABC transporter [Coprobacillus sp. 29_1]
          Length = 234

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          N G F+   G  GAGKTT ++LL
Sbjct: 32 NKGEFVVIVGASGAGKTTILNLL 54


>gi|319649376|ref|ZP_08003534.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317399010|gb|EFV79690.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 582

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           GAGKTT + LL R  +    ++     P      +  R  +            E  +F+A
Sbjct: 373 GAGKTTLLKLLIREFEGYKGEILFAGHPINRYKIDKLREAIGYVPQ-------EHFLFSA 425

Query: 74  ARLDHVE 80
              +++ 
Sbjct: 426 TVAENIA 432


>gi|308190120|ref|YP_003923051.1| multidrug resistance ABC transporter [Mycoplasma fermentans JER]
 gi|307624862|gb|ADN69167.1| multidrug resistance ABC transporter [Mycoplasma fermentans JER]
          Length = 612

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ 29
           G  I+  G  GAGKTT I+LL +F +
Sbjct: 400 GQIIAIVGPTGAGKTTIINLLSKFYE 425


>gi|303256266|ref|ZP_07342282.1| polyphosphate kinase 2 [Burkholderiales bacterium 1_1_47]
 gi|302860995|gb|EFL84070.1| polyphosphate kinase 2 [Burkholderiales bacterium 1_1_47]
          Length = 390

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      E                  
Sbjct: 150 ILFEGRDAAGKGGTIRRFMEHLNPRGARVVALEKPTQRELGEW----------------- 192

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                      + +  ++     G+I+L DR   
Sbjct: 193 -----------YFQRYVKHLPTAGEIVLFDRSWY 215


>gi|301053492|ref|YP_003791703.1| branched-chain amino acid ABC transporter ATP-binding protein
          [Bacillus anthracis CI]
 gi|300375661|gb|ADK04565.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus biovar anthracis str. CI]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|295425225|ref|ZP_06817928.1| guanylate kinase [Lactobacillus amylolyticus DSM 11664]
 gi|295065001|gb|EFG55906.1| guanylate kinase [Lactobacillus amylolyticus DSM 11664]
          Length = 204

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 76/221 (34%), Gaps = 32/221 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLK--RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           + GL +   G  G GK T  + +   +    +      TR+P            +     
Sbjct: 3   HKGLLLVLSGPSGVGKGTVKNAIVKNKVFPFEYSVSMTTRKPRPGEVDGKDYFFVSEQRF 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            E   + E + +      H    + P    L EGK +L +   D + A            
Sbjct: 63  QEAINQGELLEYNEYVGHHYGTPVGPVKKMLAEGKDVLIE--TDVNGAR----------- 109

Query: 117 LDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYF---ERKDVMIHE 171
                  +V+E MPD   I   P D      R+++R +  E   +       ++ +++ +
Sbjct: 110 -------TVREKMPDGVFIFLTPPDLHTLHLRLEHRGTESEDVIMGRIREARKEILVMQD 162

Query: 172 KRRQIFLDIARNQPDRCH-IVDSAH-SFQSVATNILNIVWE 210
               +  D   N  D    IVD+ H S + V  +   +V E
Sbjct: 163 YDYAVVNDTVANAVDHIKAIVDAEHVSVKRVIDDYRKMVEE 203


>gi|294812022|ref|ZP_06770665.1| Putative dephospho-CoA kinase [Streptomyces clavuligerus ATCC
           27064]
 gi|294324621|gb|EFG06264.1| Putative dephospho-CoA kinase [Streptomyces clavuligerus ATCC
           27064]
          Length = 79

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 12/84 (14%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190
           D  I++D   +  L+R+     + ES              +  R+    IA        +
Sbjct: 5   DLVIVVDAAPETQLERLVELRGMDESEARARMAA------QATREQRRAIAD------VV 52

Query: 191 VDSAHSFQSVATNILNIVWELVQK 214
           +D+  S + +A  + ++  EL ++
Sbjct: 53  IDNDGSREQLAAQVESVWAELARR 76


>gi|281599465|gb|ADA72449.1| Dephospho-CoA kinase [Shigella flexneri 2002017]
          Length = 95

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 16  VLVVDVSPETQLKRTMQRDDVTREHV------EQILAAQATREARLAVADD------VID 63

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 64  NNGAPDAIASDVARLHAHYLQ 84


>gi|262192480|ref|ZP_06050631.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae CT 5369-93]
 gi|262031639|gb|EEY50226.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae CT 5369-93]
          Length = 245

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 12 GKFSVIVGPNGCGKSTLLKSLCRLLK 37


>gi|254778873|ref|YP_003056978.1| shikimate kinase [Helicobacter pylori B38]
 gi|254000784|emb|CAX28708.1| Shikimate kinase (SK); putative signal peptide [Helicobacter pylori
           B38]
          Length = 162

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  ++L+ +         T
Sbjct: 62  NLIDELKTLKTP------HIIST--------------GGGIVMHENLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   RE   L     +   + EKR+ ++   A        I+D+
Sbjct: 95  FYLKIDFETLIKRLNQKE--REKRPLLNNLTQAKELFEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +    +L  +
Sbjct: 147 RGGLNNSLKQVLQFI 161


>gi|227892633|ref|ZP_04010438.1| signal recognition particle docking protein FtsY [Lactobacillus
           ultunensis DSM 16047]
 gi|227865565|gb|EEJ72986.1| signal recognition particle docking protein FtsY [Lactobacillus
           ultunensis DSM 16047]
          Length = 430

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  + +   V +
Sbjct: 233 GVNGAGKTTTIGKLAKRFKDEGKSVIL 259


>gi|222087445|ref|YP_002545982.1| pantothenate kinase protein [Agrobacterium radiobacter K84]
 gi|221724893|gb|ACM28049.1| pantothenate kinase protein [Agrobacterium radiobacter K84]
          Length = 242

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          ++ +G   +GKTT  + L   L  K  DV  T 
Sbjct: 35 VAIDGRTASGKTTLANELASCLAAKGRDVIRTS 67


>gi|213964003|ref|ZP_03392247.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Capnocytophaga
           sputigena Capno]
 gi|213953335|gb|EEB64673.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Capnocytophaga
           sputigena Capno]
          Length = 204

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 58/191 (30%), Gaps = 39/191 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           I+  G  GAGKTT  SLL +    +    DV         P  +   H      ++ +  
Sbjct: 3   IAIAGNIGAGKTTLTSLLAKHYQWEAHFEDVV------DNPYLDDFYH-----QMERWSF 51

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114
             +     +         I     +G  ++ DR  + D+               RD   +
Sbjct: 52  NLQIYFLNSRFRQ-----ILDFREKGNDIIQDRTIYEDAHIFAPNLHEMGLMTSRDFDNY 106

Query: 115 LFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             L +L + + +    PD  I L          + N  +  +    DY     +    + 
Sbjct: 107 KSLFALMERLVLP---PDLLIYL-------RSSIPNLVNQIQKRGRDYENSISIDYLNRL 156

Query: 174 RQIFLDIARNQ 184
            Q +    +  
Sbjct: 157 NQRYEQWIKGY 167


>gi|148358595|ref|YP_001249802.1| cell division membrane protein FtsY [Legionella pneumophila str.
           Corby]
 gi|148280368|gb|ABQ54456.1| cell division membrane protein FtsY [Legionella pneumophila str.
           Corby]
          Length = 355

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  Q++   V +
Sbjct: 157 GVNGAGKTTTIGKLAKQFQKQGKKVML 183


>gi|147782311|emb|CAN76299.1| hypothetical protein VITISV_019415 [Vitis vinifera]
          Length = 515

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 15/99 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHIS-LLKR--FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M  G+        GAGK+T +  +L    +       V +  E      ++     L S 
Sbjct: 222 MGGGM--------GAGKSTVLKDILAEPLWSGAAGNAVII--EADAFKESDVIYKALSSR 271

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           G  +    AE  +   +  D   +++  AL EG+ ++ D
Sbjct: 272 GHHDMLQTAE--LVHQSSTDAASSLLVTALNEGRDVIMD 308


>gi|56797546|emb|CAI38890.1| putative adenylylsulfate kinase [Campylobacter jejuni]
          Length = 170

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
            G    A+
Sbjct: 55 RQGRIDMAL 63


>gi|4097503|gb|AAD00105.1| multidrug resistance protein 1 [Aureobasidium pullulans]
 gi|4099312|gb|AAD00580.1| multidrug resistance-like protein [Aureobasidium pullulans]
          Length = 1302

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 1    MNSGLFISFEGIEGAGKTTHISLLKRF 27
            +  G FI+  G  GAGK+T +SLL+RF
Sbjct: 1084 IRPGEFIALVGPSGAGKSTILSLLQRF 1110


>gi|84489384|ref|YP_447616.1| excinuclease ABC subunit A [Methanosphaera stadtmanae DSM 3091]
 gi|84372703|gb|ABC56973.1| UvrA [Methanosphaera stadtmanae DSM 3091]
          Length = 955

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 5/36 (13%)

Query: 4   GLFISFEGIEGAGKTTHISL-----LKRFLQRKNYD 34
           G FI   G+ G+GK+T ++      L   L  K+ D
Sbjct: 648 GKFICVTGVSGSGKSTLVNKILYLGLYELLTNKHKD 683


>gi|5822764|dbj|BAA83919.1| CMK [Bacillus halodurans]
          Length = 165

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          I+ +G  GAGK+T    + + L     D
Sbjct: 3  IAIDGPAGAGKSTVAKQVAQALSFLYID 30


>gi|330815299|ref|YP_004359004.1| ABC transporter related protein [Burkholderia gladioli BSR3]
 gi|327367692|gb|AEA59048.1| ABC transporter related protein [Burkholderia gladioli BSR3]
          Length = 361

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FI   G  G GK+T + ++   L+            V  T EP     A   ++  L 
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAG-LESVSEGEIAIGGRVVNTLEPKDRDIAMVFQNYALY 88

Query: 57 CGVD 60
            + 
Sbjct: 89 PHMT 92


>gi|323650990|ref|YP_004243633.1| hypothetical protein pls32_p035 [Bacillus subtilis subsp. natto]
 gi|323461630|dbj|BAJ77046.1| hypothetical protein [Bacillus subtilis subsp. natto]
          Length = 153

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 10/95 (10%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
               I  EG++ +GK+T    + +    K+  V         P        L S     +
Sbjct: 17  KPKIIILEGVDRSGKSTLQQAINKATNYKHIVV------DRGPIGFKTYCDLFSRDPQLW 70

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97
               +     A     +E+V+   L     +L DR
Sbjct: 71  DNYDDLEKHLAK----MEDVLVIYLDCNTKVLIDR 101


>gi|307701192|ref|ZP_07638214.1| adenylate kinase [Mobiluncus mulieris FB024-16]
 gi|307613586|gb|EFN92833.1| adenylate kinase [Mobiluncus mulieris FB024-16]
          Length = 192

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 59/225 (26%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK TH + + + L                   +  RH                  
Sbjct: 7   GPPGAGKGTHATNISQRL---GVP--------WISTGDIFRH------------------ 37

Query: 71  FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSY----AYQGERDSSQHLFLDS---L 120
             AA+ D    +I   + +G+ +   + DR +        A QG         L     L
Sbjct: 38  HKAAQTD-FGKLIASYIDKGEFVPDEVTDRIVCDRLEQADARQGFLLDGYPRNLSQAEVL 96

Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           ++    +   +  D  + L++P +   +R+ +R  ++  A     + ++V+ H    ++F
Sbjct: 97  RKFLTDKSTCL--DAALYLEVPPEEVKQRLLHRAVVQGRAD----DTEEVITHR--LEVF 148

Query: 178 -------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215
                  LD    +      +D       +A  I  ++ E+  KR
Sbjct: 149 FNSTKPLLDFYAQE-GSLRQIDGVGEIPEIAARISAVLDEIESKR 192


>gi|296386871|ref|ZP_06876370.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           PAb1]
          Length = 453

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 254 GVNGVGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNRIPVIAQH-- 309

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 310 TGADSASVIFDAVQAAKARGIDVLIAD 336


>gi|295692799|ref|YP_003601409.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus ST1]
 gi|295030905|emb|CBL50384.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus ST1]
          Length = 503

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 7   ISFEGIEGAGKTTHISLL----KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I+ EG  G+GK+T I  L    +  + + NY++  + +    P         L     ++
Sbjct: 345 IAIEGKNGSGKSTLIKYLLGISQNLIAKGNYELIESLKISYLPQEFIMYSGSLKDFAKKY 404

Query: 63  GAEAEAIV-----FAAARLDHVENVIRPALMEGKIL 93
               EA++        AR D    + + ++ + K +
Sbjct: 405 HLSYEALLSNLKKMGFARADFTTRIEKMSMGQQKRV 440


>gi|294775378|ref|ZP_06740898.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          vulgatus PC510]
 gi|294450779|gb|EFG19259.1| polyamine ABC transporter, ATP-binding protein [Bacteroides
          vulgatus PC510]
          Length = 462

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 KKGEFVTVLGPSGCGKTTLLRLIA 54


>gi|293376651|ref|ZP_06622878.1| ABC transporter, ATP-binding protein [Turicibacter sanguinis PC909]
 gi|292644709|gb|EFF62792.1| ABC transporter, ATP-binding protein [Turicibacter sanguinis PC909]
          Length = 458

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKN 32
             EG  G+GKTT I  L   +    
Sbjct: 367 VIEGPNGSGKTTLIKSLLEQIPYDG 391


>gi|291006170|ref|ZP_06564143.1| LuxR family transcriptional regulator [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 912

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 28/92 (30%), Gaps = 22/92 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVH------------------VTREPGGTPAAEAA 50
            EG+ GAGKTT +       +    DV                      E    PA +  
Sbjct: 31  LEGVRGAGKTTLLEAAAERARGLGLDVVRLPVPTEERDAGRRGRRGTDVEAFDPPAGKPL 90

Query: 51  RH---VLLSCGVDEFGAEAEAIV-FAAARLDH 78
           R    V+L+  +      A   +     R DH
Sbjct: 91  RDGRLVVLADDLHRMDTAALHCLSHLLTRHDH 122


>gi|256827596|ref|YP_003151555.1| ABC transporter ATPase [Cryptobacterium curtum DSM 15641]
 gi|256583739|gb|ACU94873.1| ATPase component of ABC transporters with duplicated ATPase domain
           protein [Cryptobacterium curtum DSM 15641]
          Length = 531

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 36/144 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GKTT +  +   L      +++ +EP  +   E  R +                 
Sbjct: 377 GDNGSGKTTLVERIVEGLPDATRLLYIPQEPDESQKREVLRTIRK--------------- 421

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM- 129
            +AAR   V +++            DR          E D+     +  L  +++  +  
Sbjct: 422 LSAARRGRVLSIVAQLNSNP-----DR--------MLEGDAVSPGEMRKL-MLALGILES 467

Query: 130 PDCTII------LDLPVDIGLKRV 147
           P+  I+      LDL     L+R+
Sbjct: 468 PELVILDEPTNHLDLGSTEALERL 491


>gi|218289412|ref|ZP_03493646.1| Adenylyl-sulfate kinase [Alicyclobacillus acidocaldarius LAA1]
 gi|218240518|gb|EED07699.1| Adenylyl-sulfate kinase [Alicyclobacillus acidocaldarius LAA1]
          Length = 211

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 34/139 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L+  L  +                   R  LL       G   +   
Sbjct: 31  GLSGSGKSTIACALELALHERG-----------------VRTYLLDGDNLRHGLNRDLGF 73

Query: 71  FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
            A  R +++     V +  +  G I +C   L S   YQ +R++++ L           E
Sbjct: 74  SADHRAENIRRTAEVAKLFVDAGVIAIC--GLISP--YQRDREAARAL-------FEPGE 122

Query: 128 VMPDCTIILDLPVDIGLKR 146
            +    + +D PV++   R
Sbjct: 123 FVE---VFVDCPVEVCKAR 138


>gi|239826587|ref|YP_002949211.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           WCH70]
 gi|239806880|gb|ACS23945.1| signal recognition particle-docking protein FtsY [Geobacillus sp.
           WCH70]
          Length = 329

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G GKTT I  L   L+ +   V +    G T  A A     L    +  GAE 
Sbjct: 123 ILFVGVNGVGKTTTIGKLAHKLKSEGKTVMLAA--GDTFRAGAIEQ--LEVWGERVGAEV 178

Query: 67  EAIVFAAARLDHVENVIRPALMEG-KILLCD 96
                 +     + + I+ A      +LLCD
Sbjct: 179 IKQSAGSDPAAVIYDAIQAAKARHVDVLLCD 209


>gi|163758073|ref|ZP_02165161.1| alpha-glucosides transport atp-binding abc transporter protein
          [Hoeflea phototrophica DFL-43]
 gi|162284362|gb|EDQ34645.1| alpha-glucosides transport atp-binding abc transporter protein
          [Hoeflea phototrophica DFL-43]
          Length = 362

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI F G  G GK+T + ++ 
Sbjct: 28 QGEFIVFVGPSGCGKSTLLRMIA 50


>gi|150006052|ref|YP_001300796.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          vulgatus ATCC 8482]
 gi|149934476|gb|ABR41174.1| spermidine/putrescine transport ATP-binding protein [Bacteroides
          vulgatus ATCC 8482]
          Length = 462

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G F++  G  G GKTT + L+ 
Sbjct: 31 KKGEFVTVLGPSGCGKTTLLRLIA 54


>gi|123443106|ref|YP_001007080.1| putative ABC transporter ATP-binding protein [Yersinia
          enterocolitica subsp. enterocolitica 8081]
 gi|122090067|emb|CAL12930.1| putative ABC transporter ATP-binding protein [Yersinia
          enterocolitica subsp. enterocolitica 8081]
          Length = 583

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|116074271|ref|ZP_01471533.1| excinuclease ABC subunit A [Synechococcus sp. RS9916]
 gi|116069576|gb|EAU75328.1| excinuclease ABC subunit A [Synechococcus sp. RS9916]
          Length = 992

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVL 54
           G  +S  G+ G+GK+T +  LL   L+    + V      G     ++   V+
Sbjct: 674 GRLVSVTGVSGSGKSTLVNELLHPALENGLGHKVPFPTGLGELRGLKSIDKVI 726


>gi|119946152|ref|YP_943832.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
 gi|119864756|gb|ABM04233.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
          Length = 360

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +NSG F+ F G  G GK+T + ++ 
Sbjct: 26 INSGEFVVFVGPSGCGKSTLLRMIA 50


>gi|152987106|ref|YP_001345863.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           PA7]
 gi|150962264|gb|ABR84289.1| cell division protein FtsY [Pseudomonas aeruginosa PA7]
          Length = 447

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 248 GVNGVGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNRIPVIAQH-- 303

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 304 TGADSASVIFDAVQAAKARGIDVLIAD 330


>gi|15595570|ref|NP_249064.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           PAO1]
 gi|9946225|gb|AAG03762.1|AE004475_4 signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           PAO1]
          Length = 455

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 256 GVNGVGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNRIPVIAQH-- 311

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 312 TGADSASVIFDAVQAAKARGIDVLIAD 338


>gi|18977281|ref|NP_578638.1| ferric enterobactin transport ATP-binding protein [Pyrococcus
          furiosus DSM 3638]
 gi|18892951|gb|AAL81033.1| ferric enterobactin transport ATP-binding protein homolog
          [Pyrococcus furiosus DSM 3638]
          Length = 248

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
            G F++  G  GAGK+T +  L + L+ + 
Sbjct: 25 KEGEFLAILGPNGAGKSTLLRCLAKILKCEG 55


>gi|21910343|ref|NP_664611.1| putative ABC transporter ATP-binding protein [Streptococcus
           pyogenes MGAS315]
 gi|28895918|ref|NP_802268.1| ABC transporter ATP-binding protein [Streptococcus pyogenes SSI-1]
 gi|21904539|gb|AAM79414.1| putative ABC transporter (ATP-binding protein) [Streptococcus
           pyogenes MGAS315]
 gi|28811168|dbj|BAC64101.1| putative ABC transporter (ATP-binding protein) [Streptococcus
           pyogenes SSI-1]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|134299015|ref|YP_001112511.1| cytidylate kinase [Desulfotomaculum reducens MI-1]
 gi|172044272|sp|A4J3N3|KCY_DESRM RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|134051715|gb|ABO49686.1| cytidylate kinase [Desulfotomaculum reducens MI-1]
          Length = 222

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          I+ +G  GAGK+T    + + L     D
Sbjct: 7  IAIDGPAGAGKSTVAKKVAQKLNLLYID 34


>gi|87121154|ref|ZP_01077045.1| alpha-glucosides transport atp-binding abc transporter protein
           [Marinomonas sp. MED121]
 gi|86163646|gb|EAQ64920.1| alpha-glucosides transport atp-binding abc transporter protein
           [Marinomonas sp. MED121]
          Length = 366

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 8/93 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHV 53
           +  G FI F G  G GK+T + ++          L+    DV     P     A   +  
Sbjct: 27  IKQGEFIVFVGPSGCGKSTLLRMISGLESISGGTLEIDG-DVVNDIPPALRGIAMVFQSY 85

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPA 86
            L   +  +   A ++  A    + ++  +R A
Sbjct: 86  ALYPHMTVYDNMAFSLQIAKVSKEEIDKQVRKA 118


>gi|116054103|ref|YP_788546.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115589324|gb|ABJ15339.1| signal recognition particle receptor FtsY [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 451

 Score = 35.4 bits (81), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    +     A+   
Sbjct: 252 GVNGVGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNRIPVIAQH-- 307

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + ++ A   G  +L+ D
Sbjct: 308 TGADSASVIFDAVQAAKARGIDVLIAD 334


>gi|332175665|gb|AEE24919.1| ABC transporter related protein [Glaciecola agarilytica
          4H-3-7+YE-5]
          Length = 335

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI F G  G GK+T + ++ 
Sbjct: 29 GEFIVFVGPSGCGKSTLLRMIA 50


>gi|326693262|ref|ZP_08230267.1| excinuclease ABC subunit A [Leuconostoc argentinum KCTC 3773]
          Length = 955

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G+ G+GK+T +  +LKR L++K    H + +PG     E   ++
Sbjct: 639 GKFVAVTGVSGSGKSTLVNQILKRALKQKLN--HNSEKPGKYRTIEGVDNI 687


>gi|326803623|ref|YP_004321441.1| ABC transporter, ATP-binding protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650639|gb|AEA00822.1| ABC transporter, ATP-binding protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 599

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 16/94 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH-VTREPGGTPAAEAARHVLLSCG 58
           I+  G  GAGKTT I+LL+RF       ++    D+   +RE          +   L  G
Sbjct: 387 IAIVGPTGAGKTTLINLLERFYDVDKGSIKIDGKDIRDYSREDVSKQMGMVLQDTWLFNG 446

Query: 59  --------VDEFGAEAEAIVFAAARLDHVENVIR 84
                    D   + +E  V+AAA+  HV++ +R
Sbjct: 447 SIYDNIAYGDHNQSVSEEEVYAAAKTAHVDDFVR 480


>gi|315305194|ref|ZP_07875175.1| ABC transporter, ATP-binding/permease protein [Listeria ivanovii
           FSL F6-596]
 gi|313626436|gb|EFR95588.1| ABC transporter, ATP-binding/permease protein [Listeria ivanovii
           FSL F6-596]
          Length = 590

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + G  ++  G  G+GKTT ++LL RF       +  
Sbjct: 375 SKGKMVALVGPTGSGKTTVMNLLNRFYNVDGGSILF 410


>gi|312143879|ref|YP_003995325.1| cytidylate kinase [Halanaerobium sp. 'sapolanicus']
 gi|311904530|gb|ADQ14971.1| cytidylate kinase [Halanaerobium sp. 'sapolanicus']
          Length = 217

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T    L   L
Sbjct: 5  IAIDGPGGAGKSTIARRLAEEL 26


>gi|307611546|emb|CBX01226.1| hypothetical protein LPW_29241 [Legionella pneumophila 130b]
          Length = 355

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  Q++   V +
Sbjct: 157 GVNGAGKTTTIGKLAKQFQKQGKKVML 183


>gi|306827347|ref|ZP_07460634.1| multidrug resistance ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus pyogenes
           ATCC 10782]
 gi|304430494|gb|EFM33516.1| multidrug resistance ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus pyogenes
           ATCC 10782]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|296394693|ref|YP_003659577.1| guanylate kinase [Segniliparus rotundus DSM 44985]
 gi|296181840|gb|ADG98746.1| guanylate kinase [Segniliparus rotundus DSM 44985]
          Length = 199

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTRE 40
            G  I   G  G GK+T ++ +++ +      V   TRE
Sbjct: 4  QQGRLIVLTGPSGVGKSTIVARVRQMMPELRVSVSATTRE 43


>gi|296111254|ref|YP_003621636.1| excinuclease ABC, subunit A [Leuconostoc kimchii IMSNU 11154]
 gi|295832786|gb|ADG40667.1| excinuclease ABC, subunit A [Leuconostoc kimchii IMSNU 11154]
          Length = 956

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G F++  G+ G+GK+T +  +LKR L++K  +   + +PG   + E   ++
Sbjct: 639 GKFVAVTGVSGSGKSTLVNQILKRALKQKINN--NSEKPGKYRSIEGVENI 687


>gi|294676910|ref|YP_003577525.1| ABC transporter ATP-binding protein [Rhodobacter capsulatus SB
          1003]
 gi|294475730|gb|ADE85118.1| ABC transporter, ATP-binding protein [Rhodobacter capsulatus SB
          1003]
          Length = 348

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FIS  G  G GKTT + ++ 
Sbjct: 28 KGEFISLLGPSGCGKTTVLRMVA 50


>gi|238852564|ref|ZP_04642974.1| guanylate kinase [Lactobacillus gasseri 202-4]
 gi|282850883|ref|ZP_06260257.1| guanylate kinase [Lactobacillus gasseri 224-1]
 gi|238834710|gb|EEQ26937.1| guanylate kinase [Lactobacillus gasseri 202-4]
 gi|282557835|gb|EFB63423.1| guanylate kinase [Lactobacillus gasseri 224-1]
          Length = 204

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 27/170 (15%)

Query: 2   NSGLFISFEGIEGAGKTTH-ISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           + GL +   G  G GK T   +++K+      Y V   TR+P          + +     
Sbjct: 3   HQGLLLVLSGPSGVGKGTVKSAMVKQKAFSFEYSVSMTTRKPRPGEVDGKDYYFVSEDRF 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            E   + E + +     +H    + P    L EGK +L +  +D + A Q          
Sbjct: 63  QEAIKDNELLEYNEYVGNHYGTPLAPVQKMLKEGKDVLLE--IDVNGAKQ---------- 110

Query: 117 LDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFER 164
                   V+++MPD   I   P D      R+ NR +  +       ++
Sbjct: 111 --------VRKLMPDGVFIFLTPPDLHELKHRIVNRGTDSDKVIAMRMKQ 152


>gi|241952316|ref|XP_002418880.1| oligomycin resistance ATP-dependent permease, putative; plasma
           membrane transporter of the ATP-binding cassette (ABC)
           family, putative [Candida dubliniensis CD36]
 gi|223642219|emb|CAX44186.1| oligomycin resistance ATP-dependent permease, putative [Candida
           dubliniensis CD36]
          Length = 1485

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
             G FI   G+ G+GK++ ++ L  F++R N  V
Sbjct: 573 KKGEFIVITGLIGSGKSSLLNALSGFMKRTNGSV 606


>gi|224372103|ref|YP_002606475.1| dephospho-CoA kinase [Nautilia profundicola AmH]
 gi|223589856|gb|ACM93592.1| dephospho-CoA kinase [Nautilia profundicola AmH]
          Length = 189

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 73/214 (34%), Gaps = 28/214 (13%)

Query: 1   MNSGLF---ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57
           M S  F   I   G  G GK+T    +  FL+   Y +    E       E    +    
Sbjct: 1   MKSEKFSNAIVLTGGIGTGKST----VASFLKMFGYKIIDADEISKEVFEEQKNKIKEIF 56

Query: 58  GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           G  +       +     +L  +EN+I P + +  I   +++      Y         L+ 
Sbjct: 57  GTTDRKELRSIVFNDKEKLKTLENIILPEVRKRVINFAEKYEKDGVKYF----VDLPLYF 112

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
           +            D  +++  P ++ +KRV  R  + E   L     +            
Sbjct: 113 EKQNYPEF-----DKVLVIYAPKELQVKRVMQRDDVSEKEALSILNNQLD---------- 157

Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
           ++I + + D   ++D++   + +   I   + EL
Sbjct: 158 IEIKKQKAD--FVIDNSKDLKHLQKEIEKFIKEL 189


>gi|158424968|ref|YP_001526260.1| ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS
          571]
 gi|158331857|dbj|BAF89342.1| ABC transporter ATP-binding protein [Azorhizobium caulinodans ORS
          571]
          Length = 358

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
          +  G FI+  G  G GK+T +++L   L    
Sbjct: 33 IRQGEFIALLGPSGCGKSTTLNILAGLLPATG 64


>gi|225157631|ref|ZP_03725021.1| Adenylyl-sulfate kinase [Opitutaceae bacterium TAV2]
 gi|224802698|gb|EEG20951.1| Adenylyl-sulfate kinase [Opitutaceae bacterium TAV2]
          Length = 223

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 20/88 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L+R L  +    H                 LL       G       
Sbjct: 39  GLSGSGKSTLAIALERRLFAEGVTTH-----------------LLDGDNIRTGLNRGLGF 81

Query: 71  FAAARLD---HVENVIRPALMEGKILLC 95
               R +    V  V +     G ++LC
Sbjct: 82  TDEDRAENLRRVAEVAKLFAQAGLVVLC 109


>gi|139473760|ref|YP_001128476.1| ABC transporter ATP-binding membrane protein [Streptococcus
           pyogenes str. Manfredo]
 gi|134272007|emb|CAM30246.1| ABC transporter ATP-binding membrane protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|127950976|gb|ABO28821.1| glycosyltransferase [Streptomyces sp. Tu21]
          Length = 354

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 18/99 (18%)

Query: 100 DSSYAYQGERDSS-QHLFLDSLQEISVQEVMPDCTIILD----LPVDIGLKRVQNRYSLR 154
           D+  AY    + S     L  L   + +   PD  +  D    +   +   R       R
Sbjct: 22  DTLAAYAHIAELSTNTEMLTDLTRFA-RAWQPDLVLW-DAMSYVGPAVA--RACGAAHAR 77

Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
                D++         + R+++L +A  QP+    VD+
Sbjct: 78  LLFGTDHW--------ARMRELYLRLAAEQPEE-ARVDA 107


>gi|126658470|ref|ZP_01729618.1| twitching mobility protein [Cyanothece sp. CCY0110]
 gi|126620212|gb|EAZ90933.1| twitching mobility protein [Cyanothece sp. CCY0110]
          Length = 447

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G  G+GK+T ++ +  ++ +++    +T E       ++ R ++    V  
Sbjct: 217 HKG-LILVTGPTGSGKSTTMAAMVDYINKEHPKNIITIEDPVEFVHQSRRSLIKQREVGM 275

Query: 62  FGAEAEAIVFAAARLD 77
              + +  + AA R D
Sbjct: 276 HTLKFDNALKAALRED 291


>gi|154253683|ref|YP_001414507.1| hypothetical protein Plav_3245 [Parvibaculum lavamentivorans DS-1]
 gi|154157633|gb|ABS64850.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1]
          Length = 183

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 56/178 (31%), Gaps = 33/178 (18%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDE 61
           F    G  GAGKT+ I+ L  +              G     EA R ++    LS G   
Sbjct: 8   FFVVTGGPGAGKTSLINALADY--------------GHLHVEEAGRRIIREQKLSGGNAT 53

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
              +  A  +     +H     R    E  ++  DR       Y      S    ++  +
Sbjct: 54  HDGDRVA--YRELMFEHAIESYRRMTTETSVVFFDRGFPDLAGYSRLIGESVPPDIE--R 109

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
            I++Q    +   I   P        ++ Y+       D+   + V  H+  R  +  
Sbjct: 110 AIALQRYN-NLVFI--APPW------KDIYAADTERRQDF--AEGVTTHDAIRDAYQQ 156


>gi|111018676|ref|YP_701648.1| DNA helicase [Rhodococcus jostii RHA1]
 gi|110818206|gb|ABG93490.1| possible DNA helicase [Rhodococcus jostii RHA1]
          Length = 1770

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
           +  EG  G GKT  I+ L   L      V VT E
Sbjct: 360 VVVEGPPGTGKTHTIANLVSALLANGQRVLVTSE 393


>gi|153952431|ref|YP_001398716.1| adenylylsulfate kinase [Campylobacter jejuni subsp. doylei
          269.97]
 gi|152939877|gb|ABS44618.1| adenylylsulfate kinase [Campylobacter jejuni subsp. doylei
          269.97]
          Length = 170

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
            G    A+
Sbjct: 55 RQGRIDMAL 63


>gi|110679673|ref|YP_682680.1| ABC transporter, ATP-binding protein, putative [Roseobacter
          denitrificans OCh 114]
 gi|109455789|gb|ABG31994.1| ABC transporter, ATP-binding protein, putative [Roseobacter
          denitrificans OCh 114]
          Length = 378

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G  I+  G  G GK+T + ++  FL++   +V +
Sbjct: 49 GGELIALLGPSGCGKSTLLRIVAGFLEQTRGEVKI 83


>gi|94988619|ref|YP_596720.1| multidrug resistance ABC transporter ATP-binding and permease
           protein [Streptococcus pyogenes MGAS9429]
 gi|94992442|ref|YP_600541.1| multidrug/protein/lipid ABC transporter family ATP-binding and
           permease [Streptococcus pyogenes MGAS2096]
 gi|94542127|gb|ABF32176.1| multidrug resistance ABC transporter ATP-binding and permease
           protein [Streptococcus pyogenes MGAS9429]
 gi|94545950|gb|ABF35997.1| Multidrug/protein/lipid ABC transporter family, ATP-binding and
           permease protein [Streptococcus pyogenes MGAS2096]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|50914213|ref|YP_060185.1| multidrug ABC transporter permease/ATP-binding protein
           [Streptococcus pyogenes MGAS10394]
 gi|50903287|gb|AAT87002.1| Multidrug resistance ABC transporter ATP-binding and permease
           protein [Streptococcus pyogenes MGAS10394]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|70730163|ref|YP_259902.1| ABC transporter ATP binding/permease [Pseudomonas fluorescens
          Pf-5]
 gi|55820066|gb|AAV66099.1| PltJ [Pseudomonas fluorescens Pf-5]
 gi|68344462|gb|AAY92068.1| ABC transporter, ATP binding/permease protein [Pseudomonas
          fluorescens Pf-5]
          Length = 589

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQR 30
          SG   +  G +GAGKTT + ++   L+ 
Sbjct: 36 SGKLSALVGPDGAGKTTLLRMIAGLLKA 63


>gi|56808648|ref|ZP_00366373.1| COG1132: ABC-type multidrug transport system, ATPase and permease
           components [Streptococcus pyogenes M49 591]
 gi|209559431|ref|YP_002285903.1| Putative ABC transporter [Streptococcus pyogenes NZ131]
 gi|209540632|gb|ACI61208.1| Putative ABC transporter [Streptococcus pyogenes NZ131]
          Length = 571

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|108804850|ref|YP_644787.1| ABC transporter-like protein [Rubrobacter xylanophilus DSM 9941]
 gi|108766093|gb|ABG04975.1| ABC transporter related [Rubrobacter xylanophilus DSM 9941]
          Length = 235

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARH-VLLSCGVDE 61
           G  ++  G  GAGKTT +  +   L  R+   V    E  G PA +  R  +  S    +
Sbjct: 29  GEIVTLIGSNGAGKTTTLRSIHGLLPPRRGKIVFRGEEIQGVPAHQMIRRGIAQSPEGRK 88

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALME 89
                  +        H    IR  L  
Sbjct: 89  IFPRMTVLENLEMGAYHRAGGIREDLER 116


>gi|323127395|gb|ADX24692.1| ABC transporter ATP-binding protein [Streptococcus dysgalactiae
          subsp. equisimilis ATCC 12394]
          Length = 232

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          SG  I   G  G+GKTT I L+   LQ    D+ +
Sbjct: 29 SGKIIGLLGPNGSGKTTLIKLINGLLQPNKGDIVI 63


>gi|322411905|gb|EFY02813.1| ABC transporter ATP-binding protein [Streptococcus dysgalactiae
          subsp. dysgalactiae ATCC 27957]
          Length = 232

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          SG  I   G  G+GKTT I L+   LQ    D+ +
Sbjct: 29 SGKIIGLLGPNGSGKTTLIKLINGLLQPNKGDIVI 63


>gi|317406341|gb|EFV86572.1| hypothetical protein HMPREF0005_05168 [Achromobacter xylosoxidans
           C54]
          Length = 182

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 27/106 (25%)

Query: 126 QEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           + ++P+ T+   L LP    + R+Q R + R  A L      D  I +K R  FL+ A  
Sbjct: 80  EGLIPEFTLAVFLRLPAAERMARLQRREAERYGAAL----ATDPAIGDKSR-RFLEWAAG 134

Query: 184 Q---------PDR-----------CHIVDSAHSFQSVATNILNIVW 209
                     P+R              +D+  S   +A  +L  + 
Sbjct: 135 YDTGAEGTRTPERHREWIRQLHCPVLTLDTRASVDDLADQVLAALR 180


>gi|319652691|ref|ZP_08006801.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317395596|gb|EFV76324.1| ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 358

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          +  G  +SF G  G GKTT ++++  FL+     + V  +P
Sbjct: 26 IQKGELVSFLGPSGCGKTTTLNMIAGFLEVDGGKIEVDGKP 66


>gi|315104214|gb|EFT76190.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL050PA2]
          Length = 229

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 53/161 (32%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V    E  G         +    S     
Sbjct: 44  GPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRWEGSGYRAHIGYVPQECTWSPSWP- 102

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D      +A+Q     S         
Sbjct: 103 ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSD-LDVGQFAHQPIGTLSGGQKRRVFL 155

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 156 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 192


>gi|314923900|gb|EFS87731.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL001PA1]
 gi|314966041|gb|EFT10140.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL082PA2]
 gi|315094988|gb|EFT66964.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL060PA1]
 gi|327328078|gb|EGE69847.1| ABC transporter, ATP-binding protein [Propionibacterium acnes
           HL103PA1]
          Length = 229

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 53/161 (32%), Gaps = 25/161 (15%)

Query: 11  GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61
           G  GAGKTT +++L          L+R    V    E  G         +    S     
Sbjct: 44  GPNGAGKTTMLAVLTGIKRPRAGTLRRDGQPVRRRWEGSGYRAHIGYVPQECTWSPSWP- 102

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
                E  +   AR+  V +       +G  ++ D      +A+Q     S         
Sbjct: 103 ----VEDFLAFCARMYRVPSTQVRHRCQG--VMSD-LDVGQFAHQPIGTLSGGQKRRVFL 155

Query: 122 EISV-QEVMPDCTIILDLPVDIGL---KRVQNRYSLRESAC 158
             ++  +      +ILD    +GL   +R+  R  + E A 
Sbjct: 156 AAALVHDPE---VLILD-EPTVGLDPGERISFRRHVVEQAA 192


>gi|302670642|ref|YP_003830602.1| guanylate kinase Gmk2 [Butyrivibrio proteoclasticus B316]
 gi|302395115|gb|ADL34020.1| guanylate kinase Gmk2 [Butyrivibrio proteoclasticus B316]
          Length = 207

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%)

Query: 1   MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           MN  G+ I   G  GAGK T +  L     +    +   TR+P            + +  
Sbjct: 1   MNRKGIIIVVSGFSGAGKGTIMKALTAKYDQYALSISATTRDPRPGEVNGREYFFVSNEE 60

Query: 59  VDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
            ++  A+   ++  A  ++H        +   L  G  ++ +         QG     + 
Sbjct: 61  FEKLIAD-NGLIEHAGYVNHYYGTPRKFVEDKLNAGIDVILE------IEIQGALQVKEQ 113

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIG--LKRVQNRYSLRESACLDYFER 164
                          PD  ++  +P       KR++ R +  +       +R
Sbjct: 114 --------------YPDAVLLFVMPPSAAELEKRLRGRGTESDEVIRQRLKR 151


>gi|296328357|ref|ZP_06870884.1| nucleotide-binding protein [Fusobacterium nucleatum subsp.
          nucleatum ATCC 23726]
 gi|296154536|gb|EFG95326.1| nucleotide-binding protein [Fusobacterium nucleatum subsp.
          nucleatum ATCC 23726]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +LL + L++K Y V
Sbjct: 27 GVGKSTVTTLLAKELRKKGYSV 48


>gi|282855428|ref|ZP_06264749.1| guanylate kinase [Pyramidobacter piscolens W5455]
 gi|282586724|gb|EFB91971.1| guanylate kinase [Pyramidobacter piscolens W5455]
          Length = 191

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 72/222 (32%), Gaps = 47/222 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-GGTPAAEAARHVLLSCGV 59
             G      G  GAGK T  + +   L   +Y V   TR P  G       R +      
Sbjct: 5   RKGTLFVLSGPSGAGKGTIRARVFEALDGLSYSVSCTTRAPREGERDGVDYRFI----TP 60

Query: 60  DEFGAEAEA--IVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113
           ++F A   A   +  A    H    +++ +   L EGK                      
Sbjct: 61  EDFAARIAAGDFLEWADVHRHRYGTLKSDVEKVLNEGK--------------------DM 100

Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171
            L +D    + V++ MP+   +  +P   ++  +R++ R S  E+            +  
Sbjct: 101 FLEIDVQGALQVKKKMPEAVTLFVVPPSIEVLEERLRGRRSEGEA-----------ELRL 149

Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213
           + R    ++ +       +V+   S       +   V +  Q
Sbjct: 150 RLRNAVEEMKQRDLYDFVVVN--DSLDEAVKRVCRFVEQRRQ 189


>gi|297743174|emb|CBI36041.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 15/92 (16%)

Query: 11  GIEGAGKTTHISLL-KRFL-QRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDEFGA 64
           GI GAGKTT +  +   +  +  ++DV +      + + E  + V+L        +   +
Sbjct: 442 GIGGAGKTTLLKKINNEYFGRSNDFDVVIWVVVSKSISIEKIQEVILKKLTIPEHNWKSS 501

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
             E         +    + +    +  ++L D
Sbjct: 502 TKE---------EKAAEIFKLLKAKNFVILLD 524


>gi|262066406|ref|ZP_06026018.1| ATP-binding protein, Mrp/Nbp35 family [Fusobacterium
          periodonticum ATCC 33693]
 gi|291379833|gb|EFE87351.1| ATP-binding protein, Mrp/Nbp35 family [Fusobacterium
          periodonticum ATCC 33693]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +LL + L++K Y V
Sbjct: 27 GVGKSTVTTLLAKELRKKGYSV 48


>gi|260599765|ref|YP_003212336.1| cell division protein ftsY [Cronobacter turicensis z3032]
 gi|260218942|emb|CBA34297.1| Cell division protein ftsY [Cronobacter turicensis z3032]
          Length = 327

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  +++   V +    G T  A A   + +    +     A+   
Sbjct: 130 GVNGVGKTTTIGKLARQFEQQGKSVMLAA--GDTFRAAAVEQLQVWGQRNNIPVIAQH-- 185

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I+ A   G  +L+ D
Sbjct: 186 TGADSASVIFDAIQAAKARGVDVLIAD 212


>gi|256786975|ref|ZP_05525406.1| ABC transporter ATP-binding component [Streptomyces lividans TK24]
          Length = 313

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 59/192 (30%), Gaps = 23/192 (11%)

Query: 11  GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + +L   L       +   +DV               +H  L    +E G
Sbjct: 38  GPNGAGKTTLVRILSTLLRPDAGRVEVAGHDVVAEAYAVRLRIGLLGQHAALD---EELG 94

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                 +F   RL H+      A  +  ++   RF  S    +     S       L   
Sbjct: 95  GRQNLEMF--GRLHHLGARRARARADELLV---RFGLSDTGRKPVGAYSGG-MRRRLDLA 148

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           +     P+  + LD     GL     R        +         +    +  +L+ A  
Sbjct: 149 ASLITEPE-VLFLD-EPTTGLD---PRGRAEVWDSVRSLVGAGTTVLLTTQ--YLEEADQ 201

Query: 184 QPDRCHIVDSAH 195
             DR  +VD+  
Sbjct: 202 LADRISVVDAGR 213


>gi|256846653|ref|ZP_05552109.1| MRP-family nucleotide-binding protein [Fusobacterium sp.
          3_1_36A2]
 gi|294784362|ref|ZP_06749653.1| MRP-family nucleotide-binding protein [Fusobacterium sp. 3_1_27]
 gi|256717873|gb|EEU31430.1| MRP-family nucleotide-binding protein [Fusobacterium sp.
          3_1_36A2]
 gi|294487934|gb|EFG35289.1| MRP-family nucleotide-binding protein [Fusobacterium sp. 3_1_27]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +LL + L++K Y V
Sbjct: 27 GVGKSTVTTLLAKELRKKGYSV 48


>gi|238059756|ref|ZP_04604465.1| ATP-binding protein [Micromonospora sp. ATCC 39149]
 gi|237881567|gb|EEP70395.1| ATP-binding protein [Micromonospora sp. ATCC 39149]
          Length = 312

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          I+F G  G+GK+T  +L   FL+   + V 
Sbjct: 3  IAFTGKGGSGKSTLAALFVGFLRSAGHRVL 32


>gi|225871444|ref|YP_002747391.1| ABC transporter, ATP-binding protein [Streptococcus equi subsp.
          equi 4047]
 gi|225700848|emb|CAW95577.1| ABC transporter, ATP-binding protein [Streptococcus equi subsp.
          equi 4047]
          Length = 223

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G F    G  G+GK+T ++LL
Sbjct: 30 KGRFTVILGPSGSGKSTLLNLL 51


>gi|218666438|ref|YP_002427127.1| signal recognition particle-docking protein FtsY [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218518651|gb|ACK79237.1| signal recognition particle-docking protein FtsY [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 316

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L    + + + V +
Sbjct: 118 GINGAGKTTTIGKLAARWKAEGFTVVL 144


>gi|170516840|gb|ACB15242.1| glutamine transport ATP-binding protein GlnQ [uncultured marine
          group II euryarchaeote DeepAnt-15E7]
          Length = 259

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G  I   G  G+GK+T+I  L R        V +
Sbjct: 42 KKGEIIVILGPSGSGKSTYIRTLNRLQPHSGGTVVI 77


>gi|195978997|ref|YP_002124241.1| ABC transporter ATP-binding protein [Streptococcus equi subsp.
          zooepidemicus MGCS10565]
 gi|225869441|ref|YP_002745389.1| ABC transporter, ATP-binding protein [Streptococcus equi subsp.
          zooepidemicus]
 gi|195975702|gb|ACG63228.1| ABC transporter ATP-binding protein [Streptococcus equi subsp.
          zooepidemicus MGCS10565]
 gi|225702717|emb|CAX00846.1| ABC transporter, ATP-binding protein [Streptococcus equi subsp.
          zooepidemicus]
          Length = 223

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G F    G  G+GK+T ++LL
Sbjct: 30 KGRFTVILGPSGSGKSTLLNLL 51


>gi|254302350|ref|ZP_04969708.1| possible MRP family nucleotide-binding protein [Fusobacterium
          nucleatum subsp. polymorphum ATCC 10953]
 gi|148322542|gb|EDK87792.1| possible MRP family nucleotide-binding protein [Fusobacterium
          nucleatum subsp. polymorphum ATCC 10953]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +LL + L++K Y V
Sbjct: 27 GVGKSTVTTLLAKELRKKGYSV 48


>gi|134099441|ref|YP_001105102.1| LuxR family transcriptional regulator [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133912064|emb|CAM02177.1| LuxR-family transcriptional regulator [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 910

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 28/92 (30%), Gaps = 22/92 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVH------------------VTREPGGTPAAEAA 50
            EG+ GAGKTT +       +    DV                      E    PA +  
Sbjct: 29  LEGVRGAGKTTLLEAAAERARGLGLDVVRLPVPTEERDAGRRGRRGTDVEAFDPPAGKPL 88

Query: 51  RH---VLLSCGVDEFGAEAEAIV-FAAARLDH 78
           R    V+L+  +      A   +     R DH
Sbjct: 89  RDGRLVVLADDLHRMDTAALHCLSHLLTRHDH 120


>gi|94990494|ref|YP_598594.1| multidrug/protein/lipid ABC transporter family ATP-binding and
           permease [Streptococcus pyogenes MGAS10270]
 gi|94544002|gb|ABF34050.1| Multidrug/protein/lipid ABC transporter family, ATP-binding and
           permease protein [Streptococcus pyogenes MGAS10270]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|126723638|ref|NP_001075642.1| PAPS synthase 2 [Oryctolagus cuniculus]
 gi|47834980|gb|AAT39125.1| PAPS synthase 2 [Oryctolagus cuniculus]
          Length = 615

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 7/44 (15%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          G+ GAGKTT    L+ +L            P  +   +  RH L
Sbjct: 49 GLSGAGKTTISFALEEYLVSHGI-------PCYSLDGDNIRHGL 85


>gi|71910684|ref|YP_282234.1| multidrug resistance ABC transporter ATP-binding and permease
           [Streptococcus pyogenes MGAS5005]
 gi|71853466|gb|AAZ51489.1| multidrug resistance ABC transporter ATP-binding and permease
           protein [Streptococcus pyogenes MGAS5005]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|15675126|ref|NP_269300.1| putative ABC transporter ATP-binding protein [Streptococcus
           pyogenes M1 GAS]
 gi|13622285|gb|AAK34021.1| putative ABC transporter (ATP-binding protein) [Streptococcus
           pyogenes M1 GAS]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDAGSIKLDKVPIKCYAKEELRSI 415


>gi|19705388|ref|NP_602883.1| MRP family nucleotide-binding protein [Fusobacterium nucleatum
          subsp. nucleatum ATCC 25586]
 gi|19713377|gb|AAL94182.1| MRP-family nucleotide-binding protein [Fusobacterium nucleatum
          subsp. nucleatum ATCC 25586]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +LL + L++K Y V
Sbjct: 27 GVGKSTVTTLLAKELRKKGYSV 48


>gi|28377706|ref|NP_784598.1| guanylate kinase [Lactobacillus plantarum WCFS1]
 gi|28270539|emb|CAD63443.1| guanylate kinase [Lactobacillus plantarum WCFS1]
          Length = 193

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 16/49 (32%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
          M +       G  G+GKTT    L+   Q      H TR P        
Sbjct: 1  MTTKRIFVITGPTGSGKTTVSHYLRSQYQIPQVITHTTRAPREGEVGGR 49


>gi|15829038|ref|NP_326398.1| adenylate kinase [Mycoplasma pulmonis UAB CTIP]
 gi|20138507|sp|Q98Q02|KAD_MYCPU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|14089982|emb|CAC13740.1| ADENYLATE KINASE (ATP-AMP TRANSPHOSPHORYLASE) [Mycoplasma pulmonis]
          Length = 214

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 63/238 (26%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE------PGGTPAAEAARHVLLSCG 58
            FI F G  G GK T  SL+ +   +  ++   T           +      + ++ S G
Sbjct: 4   RFIVF-GPPGVGKGTLASLVSQ---KYGFEHISTGNIFRSQIASNSELGIKLKEIVESGG 59

Query: 59  VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118
                   E           V+  +     E K  + D +          R  +Q  FL 
Sbjct: 60  YVPDSITNEI----------VKKTLADLEKEQKSYILDGY---------PRTLNQIEFLF 100

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY----------------------SLRES 156
           SL +     V       L+ P +I LKR+  R                        + +S
Sbjct: 101 SLNKAQEYSVW-----FLEAPSEIILKRLSGRRICPSCNAQYHIYFKKSKLDTKCEIDQS 155

Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRC------HIVDSAHSFQSVATNILNIV 208
             +   + ++  I ++  +I+     +             +D++   + +   +   V
Sbjct: 156 ELIQRKDDQESSIIKRL-EIYEKQTNSLKKYFKELGILVEIDASKDREEILKELEQKV 212


>gi|84387226|ref|ZP_00990247.1| putative sugar ABC transporter ATP-binding protein [Vibrio
          splendidus 12B01]
 gi|84377873|gb|EAP94735.1| putative sugar ABC transporter ATP-binding protein [Vibrio
          splendidus 12B01]
          Length = 360

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +++G F+ F G  G GK+T + L+ 
Sbjct: 26 ISNGEFVVFVGPSGCGKSTLLRLVA 50


>gi|116490517|ref|YP_810061.1| deoxynucleoside kinase [Oenococcus oeni PSU-1]
 gi|290889917|ref|ZP_06553004.1| hypothetical protein AWRIB429_0394 [Oenococcus oeni AWRIB429]
 gi|116091242|gb|ABJ56396.1| Deoxynucleoside kinase [Oenococcus oeni PSU-1]
 gi|290480527|gb|EFD89164.1| hypothetical protein AWRIB429_0394 [Oenococcus oeni AWRIB429]
          Length = 214

 Score = 35.4 bits (81), Expect = 5.4,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 80/235 (34%), Gaps = 59/235 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGKT+  +LL + L  K     V+  P            +L    D+    A
Sbjct: 2   IVLSGTIGAGKTSLTNLLSKHLGSKAIYESVSDNP------------ILPLFYDDPKKYA 49

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHL-------- 115
             +   F   RL +++N     L      + DR +   +  +Q   D  +          
Sbjct: 50  FLLQIYFLNKRLQNIKNAQENKLD-----VIDRSIFEDALLFQLNADLGRSTQTEVDIYK 104

Query: 116 -----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170
                 ++ L E+  ++  PD  I + +  D  L R++ R           FE+  + +H
Sbjct: 105 SLLSNMMEKLDELPSKD--PDLLIHVRVSFDNMLSRIEKRGRD--------FEQ--ISVH 152

Query: 171 EKRRQIFLDIARNQPDRCHI--------VDSAH-----SFQSVATNILNIVWELV 212
               + + ++ R                +D        S  + A  +LN + E +
Sbjct: 153 PDLYKYYQELNRRYAVWYAAYDRGPKMEIDGDKYDFVESKDA-AQEVLNQIDERL 206


>gi|329123268|ref|ZP_08251836.1| cytidylate kinase [Haemophilus aegyptius ATCC 11116]
 gi|327471477|gb|EGF16925.1| cytidylate kinase [Haemophilus aegyptius ATCC 11116]
          Length = 246

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 23 GMIITVDGPSGAGKGTLCYALAEKL 47


>gi|323127215|gb|ADX24512.1| Multidrug/protein/lipid ABC transporter family, ATP-binding and
           permease protein [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           ++  G  GAGKTT I+LL RF +  +  + + + P      E  R ++
Sbjct: 369 VAIVGPTGAGKTTLINLLMRFYEVDDGSIMLDQVPIKDYDKEEFRSII 416


>gi|320334531|ref|YP_004171242.1| Adenylyl-sulfate kinase [Deinococcus maricopensis DSM 21211]
 gi|319755820|gb|ADV67577.1| Adenylyl-sulfate kinase [Deinococcus maricopensis DSM 21211]
          Length = 181

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          G  + F G+ GAGK+T    L+  L+ +   V
Sbjct: 15 GRVVWFTGLSGAGKSTLAGALRDELEARGERV 46


>gi|311246510|ref|XP_003122226.1| PREDICTED: adenylate kinase isoenzyme 1-like isoform 2 [Sus scrofa]
          Length = 211

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 50/225 (22%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           +     I   G  G+GK T    + +   +  Y    T         +  R  + S    
Sbjct: 22  LKKSKIIFVVGGPGSGKGTQCEKIVQ---KYGYTHLST--------GDLLRAEVSSGS-- 68

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAY----QGERDSS 112
                        AR   +  +    + +G+++    + D   D+  A     +G     
Sbjct: 69  -------------ARGKMLSEI----MEKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDG 111

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               +   +E   +   P   + +D   +   KR+  R     S  +D  E       +K
Sbjct: 112 YPREVKQGEEFERKIGQPTLLLYVDAGPETMTKRLLKRGET--SGRVDDNE----ETIKK 165

Query: 173 RRQIFLD-----IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
           R + +       IA  +       V++  S   V + +   +  L
Sbjct: 166 RLETYYKATEPVIAFYEKRGIVRKVNAEGSVDDVFSQVCTHLDTL 210


>gi|304313969|ref|YP_003849116.1| signal recognition particle protein [Methanothermobacter
           marburgensis str. Marburg]
 gi|302587428|gb|ADL57803.1| predicted signal recognition particle protein [Methanothermobacter
           marburgensis str. Marburg]
          Length = 359

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 18/132 (13%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           +F+   GI G GKTT I+ + R+  +   +  +      T  A A   +      D+ G 
Sbjct: 168 MFV---GINGTGKTTTIAKVARYFMKMGLEPVMAA--ADTFRAGAIEQI--HEHADKLGV 220

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  +    A       + +  A  +GK ++L D            R  +    +D + +I
Sbjct: 221 KIISHRKGADPAAVAFDAVSHAKAQGKDVVLID---------TAGRMQTNVNLMDEMAKI 271

Query: 124 SVQEVMPDCTII 135
             + V PD  + 
Sbjct: 272 -KRVVKPDLILF 282


>gi|303232848|ref|ZP_07319532.1| ABC transporter, ATP-binding protein [Atopobium vaginae
          PB189-T1-4]
 gi|302481038|gb|EFL44114.1| ABC transporter, ATP-binding protein [Atopobium vaginae
          PB189-T1-4]
          Length = 233

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)

Query: 1  MN----SGLFISFEGIEGAGKTTHISLLK 25
          MN     G F+   G  GAGKTT +++L 
Sbjct: 26 MNFSIEQGEFVVIVGPSGAGKTTVLNMLA 54


>gi|302038840|ref|YP_003799162.1| replication-associated recombination protein A [Candidatus
           Nitrospira defluvii]
 gi|300606904|emb|CBK43237.1| Replication-associated recombination protein A [Candidatus
           Nitrospira defluvii]
          Length = 429

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 11/88 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G GKTT   L+ +  + +   V  +   GG P     R ++ +         A  + 
Sbjct: 66  GPPGCGKTTLAGLVAQHTESQF--VPFSAVTGGIP---ELREIIKAAEHRRAMGRATTLF 120

Query: 71  ----FAAARLDHVENVIRPALMEGKILL 94
                   +    ++   P +  G ++L
Sbjct: 121 VDEIHRFNKAQ--QDAFLPHVERGTVVL 146


>gi|300715502|ref|YP_003740305.1| ABC transporter related protein [Erwinia billingiae Eb661]
 gi|299061338|emb|CAX58447.1| ABC transporter related protein [Erwinia billingiae Eb661]
          Length = 363

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +++G FI F G  G GK+T + ++ 
Sbjct: 26 IDNGEFIVFVGPSGCGKSTLLRMIA 50


>gi|294979847|pdb|3MD0|A Chain A, Crystal Structure Of ArginineORNITHINE TRANSPORT SYSTEM
           Atpase From Mycobacterium Tuberculosis Bound To Gdp (A
           Ras- Like Gtpase Superfamily Protein)
 gi|311772280|pdb|3P32|A Chain A, Hydrolysis Of Gtp To Gdp By An Mcm-Associated And Meab-
           And Mmaa-Like G-Protein From Mycobacterium Tuberculosis
          Length = 355

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
           G+ G GK+T I  L   L  + + V  +  +P  T    + 
Sbjct: 86  GVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSI 126


>gi|261837608|gb|ACX97374.1| shikimic acid kinase I [Helicobacter pylori 51]
          Length = 162

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 48/197 (24%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVRGIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131
             +D ++ +  P ++   G I++ D                      +L+ +        
Sbjct: 62  NLIDELKTLKTPHIISTGGGIVMHD----------------------NLKGLGT------ 93

Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191
            T  L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+
Sbjct: 94  -TFYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FII 144

Query: 192 DSAHSFQSVATNILNIV 208
           D+     +    +L  +
Sbjct: 145 DARGGLNNSLKQVLQFI 161


>gi|251782319|ref|YP_002996621.1| ABC transporter ATP-binding membrane protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390948|dbj|BAH81407.1| ABC transporter ATP-binding membrane protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 575

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           ++  G  GAGKTT I+LL RF +  +  + + + P      E  R ++
Sbjct: 369 VAIVGPTGAGKTTLINLLMRFYEVDDGSIMLDQVPIKDYDKEEFRSII 416


>gi|238759757|ref|ZP_04620915.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          aldovae ATCC 35236]
 gi|238701989|gb|EEP94548.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          aldovae ATCC 35236]
          Length = 580

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|222528314|ref|YP_002572196.1| ABC transporter-like protein [Caldicellulosiruptor bescii DSM
          6725]
 gi|222455161|gb|ACM59423.1| ABC transporter related [Caldicellulosiruptor bescii DSM 6725]
          Length = 254

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G F+S  G  GAGK+T +  + + L+ K   V +
Sbjct: 25 KKGEFVSILGNNGAGKSTLLKCIAKLLKPKRGVVLI 60


>gi|198464757|ref|XP_001353357.2| GA14347 [Drosophila pseudoobscura pseudoobscura]
 gi|198149865|gb|EAL30864.2| GA14347 [Drosophila pseudoobscura pseudoobscura]
          Length = 229

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 10/92 (10%)

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEKRRQIFLDIARNQPDR 187
           D  +  D   D  LKR+  R +       D  E   R  +   ++     L++     D+
Sbjct: 134 DLALYFDCSEDTMLKRILARAAAAAVKRSDDNEETIRARLQTFKQNTSAILEL---YADK 190

Query: 188 CHI----VDSAHSFQSVATNILNIVWELVQKR 215
                  +++      +   ++  +  +++K+
Sbjct: 191 TLTASSKINAERDVDDIFQEVVQAIDCVLKKK 222


>gi|193084369|gb|ACF10025.1| glutamine transport ATP-binding protein glnQ [uncultured marine
          group II euryarchaeote AD1000-18-D2]
          Length = 260

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G  I   G  G+GK+T+I  L R        V +
Sbjct: 43 KKGEIIVILGPSGSGKSTYIRTLNRLQPHSGGTVVI 78


>gi|193083901|gb|ACF09580.1| glutamine transport ATP-binding protein glnQ [uncultured marine
          group II euryarchaeote KM3-72-G3]
          Length = 259

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G  I   G  G+GK+T+I  L R        V +
Sbjct: 42 KKGEIIVILGPSGSGKSTYIRTLNRLQPHSGGTVVI 77


>gi|189014390|gb|ACD69431.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014392|gb|ACD69432.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014394|gb|ACD69433.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014402|gb|ACD69437.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014408|gb|ACD69440.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014410|gb|ACD69441.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014414|gb|ACD69443.1| gualynate kinase-1 [Gryllus pennsylvanicus]
 gi|189014420|gb|ACD69446.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014422|gb|ACD69447.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014426|gb|ACD69449.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014428|gb|ACD69450.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014434|gb|ACD69453.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014438|gb|ACD69455.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014442|gb|ACD69457.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014444|gb|ACD69458.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014446|gb|ACD69459.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014448|gb|ACD69460.1| gualynate kinase-1 [Gryllus firmus]
 gi|189014450|gb|ACD69461.1| gualynate kinase-1 [Gryllus firmus]
          Length = 199

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41
          I   G  G+GK+T +  L      K  + V H TR+P
Sbjct: 9  IVVCGPSGSGKSTLLRRLFEEFPDKFGFSVSHTTRQP 45


>gi|159905519|ref|YP_001549181.1| hypothetical protein MmarC6_1136 [Methanococcus maripaludis C6]
 gi|159887012|gb|ABX01949.1| conserved hypothetical protein [Methanococcus maripaludis C6]
          Length = 185

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          M   + I+  G  G GK+T   +L   L+    D+
Sbjct: 1  MGENIIIAITGTPGVGKSTVSKILFENLKSSGKDI 35


>gi|118616606|ref|YP_904938.1| adenylate kinase [Mycobacterium ulcerans Agy99]
 gi|166980337|sp|A0PM98|KAD_MYCUA RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|118568716|gb|ABL03467.1| adenylate kinase (ATP-AMP transphosphorylase), Adk [Mycobacterium
           ulcerans Agy99]
          Length = 181

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 58/214 (27%), Gaps = 49/214 (22%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVD 60
           +   G  GAGK T    L   L         T E        GT     A+   L  G  
Sbjct: 3   VVLLGPPGAGKGTQAQKLAEKL---GIPQISTGELFRKNIQDGTKLGVEAKR-YLDAGDL 58

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                   +     RLD      +P    G   + D +  S    +   +  +    D  
Sbjct: 59  VPSDLTNQL--VDDRLD------QPDTAAGF--ILDGYPRSVEQAKALHEMLRRRDTDI- 107

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFL 178
                     D  +   +  D  L+R++ R    ++    L+              +++ 
Sbjct: 108 ----------DAVLEFRVSQDELLQRLKGRGRADDTDEVILNRM------------KVYR 145

Query: 179 D----IARNQPDRCHIVDSAHSFQSVATNILNIV 208
           D    +          VD+  +   V    L  +
Sbjct: 146 DETAPLLEFYDTEVKTVDAIGTLDEVFARALQAL 179


>gi|154248847|ref|YP_001409672.1| ABC transporter related [Fervidobacterium nodosum Rt17-B1]
 gi|154152783|gb|ABS60015.1| ABC transporter related [Fervidobacterium nodosum Rt17-B1]
          Length = 628

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 15/105 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARH 52
           + SG  ++  G  GAGKTT ++LL RF + +   + V         R           + 
Sbjct: 408 IKSGQMVAIVGPTGAGKTTLVNLLMRFYEIQGGSIRVDGIDIRDIKRYNLRKHFGMVLQD 467

Query: 53  VLLSCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGK 91
             L  G  +           E  +  AA++ HV + I  AL +G 
Sbjct: 468 TWLFSGTIKDNIAYGKTNATEEEIIKAAKMAHVHHFIM-ALPDGY 511


>gi|219847760|ref|YP_002462193.1| hypothetical protein Cagg_0834 [Chloroflexus aggregans DSM 9485]
 gi|219542019|gb|ACL23757.1| protein of unknown function DUF344 [Chloroflexus aggregans DSM
           9485]
          Length = 549

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 46/156 (29%), Gaps = 39/156 (25%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I  L   L  + Y VH    P G                     +A
Sbjct: 352 IVFEGWDAAGKGGAIQRLTAELDPRAYIVHAIAAPTG-------------------DDKA 392

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-HLFLDSLQEISV 125
              ++            R     G+  + DR        +     ++   +  +  EI+ 
Sbjct: 393 RHYLY---------RFWRRLPPRGQFAVFDRSWYGRVLVERVEGFARPEEWRRAYAEINQ 443

Query: 126 QEVMPDCT--------IILDLPVDIGLKRVQNRYSL 153
            E                L +  +  L+R + R ++
Sbjct: 444 FERQ--LVDFGTIIAKFWLHISPEEQLRRFEQRQNV 477


>gi|116874116|ref|YP_850897.1| ABC transporter, ATP-binding/permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742994|emb|CAK22118.1| ABC transporter, ATP-binding/permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 590

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + G  ++  G  G+GKTT ++LL RF       +  
Sbjct: 375 SKGKMVALVGPTGSGKTTVMNLLNRFYNVDGGSILF 410


>gi|29827815|ref|NP_822449.1| regulatory protein [Streptomyces avermitilis MA-4680]
 gi|29604916|dbj|BAC68984.1| putative regulatory protein [Streptomyces avermitilis MA-4680]
          Length = 267

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK + I  +   L  +   +    +P      +                  
Sbjct: 41  IVFEGRDAAGKGSTIKRVAEHLNPRQARIVALPKPTERERTQW----------------- 83

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    ++H+          G+I+L DR   
Sbjct: 84  ----YFQRYVEHLP-------AAGEIVLFDRSWY 106


>gi|85057308|ref|YP_456224.1| multidrug resistance ABC transporter ATP-binding and permease
           protein [Aster yellows witches'-broom phytoplasma AYWB]
 gi|84789413|gb|ABC65145.1| multidrug resistance ABC transporter ATP-binding and permease
           protein [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 574

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF 27
           M  G  ++F G  G+GK+T I L+ R 
Sbjct: 356 MKKGQIVAFVGATGSGKSTLIGLIPRL 382


>gi|332142894|ref|YP_004428632.1| signal recognition particle GTPase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|332143061|ref|YP_004428799.1| signal recognition particle GTPase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327552916|gb|AEA99634.1| signal recognition particle GTPase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327553083|gb|AEA99801.1| signal recognition particle GTPase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 541

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q++   V +    G T  A A   + +    ++    A+   
Sbjct: 340 GVNGVGKTTTIGKLAKQFQQQGKKVMLAA--GDTFRAAAVEQLQVWGERNDIPVIAQH-- 395

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + +  A   G  IL+ D
Sbjct: 396 TGADSASVLYDALEAAKSRGTDILIAD 422


>gi|238784233|ref|ZP_04628245.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          bercovieri ATCC 43970]
 gi|238714800|gb|EEQ06800.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          bercovieri ATCC 43970]
          Length = 583

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|322496063|emb|CBZ31135.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1439

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 68/205 (33%), Gaps = 44/205 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GI   GKTT    L   L+              +T + G     E  + V      D   
Sbjct: 350 GIPAVGKTTLGRELVNSLKTDGMGWAFFSGADFLTEQQGKRSIWETTKDVF-----DALS 404

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  + ++       H +  I+       +++             +++      +  L  +
Sbjct: 405 SRLDELL----EKQHKDRNIK------GLVI-------------DKNCKGIEDVYYLSAL 441

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + + +P     + +   +G++  ++   ++     DY  ++ +  H       + +A++
Sbjct: 442 LLSKSIP----FVGI---VGMECAEDDVLVKRMGGDDYL-KEKLKFHRVIHARIVSLAKS 493

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
                  VD+  S + V   +  +V
Sbjct: 494 A-GMYRYVDATKSKEEVVQMLRTMV 517


>gi|302828182|ref|XP_002945658.1| hypothetical protein VOLCADRAFT_85850 [Volvox carteri f.
           nagariensis]
 gi|300268473|gb|EFJ52653.1| hypothetical protein VOLCADRAFT_85850 [Volvox carteri f.
           nagariensis]
          Length = 1104

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARH 52
            G      G  GAGKTT I+ L   +     +  V  EP   P   +  R 
Sbjct: 633 QGQLFCLLGPNGAGKTTTINCLTGAIPPTGGEALVYEEPISNPGGLDRIRA 683


>gi|288553511|ref|YP_003425446.1| membrane ATPase/protein kinase [Bacillus pseudofirmus OF4]
 gi|288544671|gb|ADC48554.1| putative ATPase transporter for arginine/ornithine [Bacillus
           pseudofirmus OF4]
          Length = 332

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60
           I F G+ GAGK+T I      L  + + V  +  +P     GG+   +  R   LS   +
Sbjct: 62  IGFSGVPGAGKSTLIEAFGMMLCERGHKVAVLAVDPSSTLTGGSILGDKTRMEQLSRHPN 121

Query: 61  EF 62
            +
Sbjct: 122 AY 123


>gi|268319094|ref|YP_003292750.1| ABC transporter ATPase component [Lactobacillus johnsonii FI9785]
 gi|262397469|emb|CAX66483.1| ABC transporter ATPase component [Lactobacillus johnsonii FI9785]
          Length = 217

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          NSG F++  G  GAGK+T + ++   L
Sbjct: 27 NSGDFLTIVGPSGAGKSTLLKIIASLL 53


>gi|255744585|ref|ZP_05418536.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholera CIRS 101]
 gi|262161280|ref|ZP_06030391.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae INDRE 91/1]
 gi|262168772|ref|ZP_06036467.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae RC27]
 gi|255737616|gb|EET93010.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholera CIRS 101]
 gi|262022890|gb|EEY41596.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae RC27]
 gi|262029030|gb|EEY47683.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae INDRE 91/1]
          Length = 245

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 12 GKFSVIVGPNGCGKSTLLKSLCRLLK 37


>gi|304316936|ref|YP_003852081.1| signal recognition particle-docking protein FtsY
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302778438|gb|ADL68997.1| signal recognition particle-docking protein FtsY
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 319

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 32/92 (34%), Gaps = 7/92 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I   G+ G GKTT I  L    + +   V +        AA     V  S    E    
Sbjct: 122 LIV--GVNGVGKTTTIGKLANKYKNEGKKVLLVAADTFRAAAIDQLEVWASRNNCEIIRH 179

Query: 66  AEAIVFAAARLDHVENVIRPALMEG-KILLCD 96
            E     +     V + I+ A   G  I+LCD
Sbjct: 180 EE----GSDPASVVFDGIKAAKARGADIILCD 207


>gi|238810330|dbj|BAH70120.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 615

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ 29
           G  I+  G  GAGKTT I+LL +F +
Sbjct: 403 GQIIAIVGPTGAGKTTIINLLSKFYE 428


>gi|238763644|ref|ZP_04624604.1| Cell division protein ftsY [Yersinia kristensenii ATCC 33638]
 gi|238698122|gb|EEP90879.1| Cell division protein ftsY [Yersinia kristensenii ATCC 33638]
          Length = 502

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 305 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGDRNKIAVVAQH-- 360

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 361 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKSHLMEELKKIV 406


>gi|269955654|ref|YP_003325443.1| ABC transporter-like protein [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304335|gb|ACZ29885.1| ABC transporter related protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 240

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 12/79 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG------------TPAAEAARHVLLSCG 58
           G  G+GK+T + LL   ++  N +V   R P              +      +  LL   
Sbjct: 52  GPSGSGKSTLLYLLALMIRPTNGEVVWDRVPASRMADAARSRLRASQVGFIFQDALLDPS 111

Query: 59  VDEFGAEAEAIVFAAARLD 77
                   ++ +FA  R +
Sbjct: 112 RSVLANVCDSGLFAGMRRE 130


>gi|224477480|ref|YP_002635086.1| putative ABC transporter ATP-binding protein [Staphylococcus
          carnosus subsp. carnosus TM300]
 gi|222422087|emb|CAL28901.1| putative ABC transporter ATP-binding protein [Staphylococcus
          carnosus subsp. carnosus TM300]
          Length = 226

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 17/24 (70%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          ++ G FI+  G  G+GK+T I+++
Sbjct: 28 IHKGEFIAIMGPSGSGKSTLINII 51


>gi|188997072|ref|YP_001931323.1| dethiobiotin synthase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932139|gb|ACD66769.1| dethiobiotin synthase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 217

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 5/49 (10%)

Query: 1  MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPA 46
          M   LFI+    + G GKTT    L + L  K   V   +  E G  P 
Sbjct: 1  MLKSLFIT--ATDTGVGKTTISYALAKTLIEKGLKVAYFKPIETGANPI 47


>gi|170016743|ref|YP_001727662.1| excinuclease ABC subunit A [Leuconostoc citreum KM20]
 gi|169803600|gb|ACA82218.1| Excinuclease ABC, A subunit [Leuconostoc citreum KM20]
          Length = 956

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 5   LFISFEGIEGAGKTTHI-SLLKRFLQRK 31
            FI   G+ G+GK+T +  +LKR L++K
Sbjct: 640 KFIVVTGVSGSGKSTLVNQILKRALKQK 667


>gi|196041924|ref|ZP_03109212.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus NVH0597-99]
 gi|196027296|gb|EDX65915.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus NVH0597-99]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|149182073|ref|ZP_01860558.1| ABC transporter (ATP-binding protein) [Bacillus sp. SG-1]
 gi|148850252|gb|EDL64417.1| ABC transporter (ATP-binding protein) [Bacillus sp. SG-1]
          Length = 267

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55
          MN G F++  G  GAGK+T ++++   L     +V +      T  +E  R  L+
Sbjct: 32 MNPGDFVTVIGSNGAGKSTLMNMVSGVLTPDTGEVIID-NNDVTRVSEYKRSKLI 85


>gi|146075012|ref|XP_001462661.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134066739|emb|CAM65199.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 1438

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 68/205 (33%), Gaps = 44/205 (21%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           GI   GKTT    L   L+              +T + G     E  + V      D   
Sbjct: 349 GIPAVGKTTLGRELVNSLKTDGMGWAFFSGADFLTEQQGKRSIWETTKDVF-----DALS 403

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
           +  + ++       H +  I+       +++             +++      +  L  +
Sbjct: 404 SRLDELL----EKQHKDRNIK------GLVI-------------DKNCKGIEDVYYLSAL 440

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
            + + +P     + +   +G++  ++   ++     DY  ++ +  H       + +A++
Sbjct: 441 LLSKSIP----FVGI---VGMECAEDDVLVKRMGGDDYL-KEKLKFHRVIHARIVSLAKS 492

Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208
                  VD+  S + V   +  +V
Sbjct: 493 A-GMYRYVDATKSKEEVVQMLRTMV 516


>gi|150376537|ref|YP_001313133.1| ABC transporter-like protein [Sinorhizobium medicae WSM419]
 gi|150031084|gb|ABR63200.1| ABC transporter related [Sinorhizobium medicae WSM419]
          Length = 370

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F+ F G  G GK+T + L+   +     DV +
Sbjct: 29 GEFVVFVGPSGCGKSTLLRLIAGLVPVSGGDVFI 62


>gi|46446675|ref|YP_008040.1| adenylate kinase [Candidatus Protochlamydia amoebophila UWE25]
 gi|46400316|emb|CAF23765.1| probable adenylate kinase (EC 2.7.4.3) [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 231

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 33/146 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           G  G+GK T    L    Q  +         H+++E   T     A+  + +    +   
Sbjct: 23  GPPGSGKGTQAKRLAHEYQIPHISSGDLFREHMSKE---TIIGLKAKEFIQAG---KLVP 76

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +   +     RL H      P    G   L D F   + A        + + +       
Sbjct: 77  DEFVMDMLFDRLAH------PDCARGY--LLDGFPR-TVAQAEALAGKRDIKI------- 120

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150
                P   + L++P  + +KR + R
Sbjct: 121 -----PLIVLYLEVPDAVIVKRAEGR 141


>gi|548898|sp|P36536|SAR1A_MOUSE RecName: Full=GTP-binding protein SAR1a
 gi|436564|gb|AAA16323.1| GTP-binding protein [Mus musculus]
          Length = 198

 Score = 35.4 bits (81), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTRE 40
           SG    F G++ AGKTT + +LK   L +    +H T E
Sbjct: 24 KSGKL-VFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSE 62


>gi|326803197|ref|YP_004321015.1| ABC transporter, ATP-binding protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651447|gb|AEA01630.1| ABC transporter, ATP-binding protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 255

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA----ARHVLLSC 57
           N G FI+  G  GAGK+T ++ +       + ++ +  +   T + E        V    
Sbjct: 33  NQGDFITIVGGNGAGKSTLLNAIAGTFALDSGEIFLEEKDITTKSEEERAGSISRVFQDP 92

Query: 58  GVDEFGAEA--EAIVFAAARLD 77
            +         E +  AA R  
Sbjct: 93  KMGTAPRMTVAENLALAAKRGQ 114


>gi|319777424|ref|YP_004137075.1| abc transporter, ATP-binding protein [Mycoplasma fermentans M64]
 gi|318038499|gb|ADV34698.1| ABC transporter, ATP-binding protein [Mycoplasma fermentans M64]
          Length = 612

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQ 29
           G  I+  G  GAGKTT I+LL +F +
Sbjct: 400 GQIIAIVGPTGAGKTTIINLLSKFYE 425


>gi|307700401|ref|ZP_07637440.1| putative branched-chain amino acid transport ATP-binding protein
           LivG [Mobiluncus mulieris FB024-16]
 gi|307614386|gb|EFN93616.1| putative branched-chain amino acid transport ATP-binding protein
           LivG [Mobiluncus mulieris FB024-16]
          Length = 281

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLK-RFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56
           ++G FI+  G  GAGK+T ++++    L         +  VTR P    AA   R V   
Sbjct: 52  SAGDFITIVGGNGAGKSTLLNVIAGSILADSGRVKIDETDVTRLPEEDRAAMIGR-VFQD 110

Query: 57  CGVDEFGAEA--EAIVFAAARLD 77
                       E ++ A+ R +
Sbjct: 111 PKQGTAPRMTVAENLLLASKRGE 133


>gi|302340536|ref|YP_003805742.1| ABC transporter [Spirochaeta smaragdinae DSM 11293]
 gi|301637721|gb|ADK83148.1| ABC transporter related protein [Spirochaeta smaragdinae DSM
          11293]
          Length = 248

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKN 32
           G  I+  G  G GK+T I+++   L+ + 
Sbjct: 29 RGRTIAILGPSGCGKSTLIAMIAGILRGEG 58


>gi|296108316|ref|YP_003620017.1| signal recognition particle receptor [Legionella pneumophila
           2300/99 Alcoy]
 gi|295650218|gb|ADG26065.1| signal recognition particle receptor [Legionella pneumophila
           2300/99 Alcoy]
          Length = 355

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  Q++   V +
Sbjct: 157 GVNGAGKTTTIGKLAKQFQKQGKKVML 183


>gi|294495993|ref|YP_003542486.1| adenylate kinase [Methanohalophilus mahii DSM 5219]
 gi|292666992|gb|ADE36841.1| Adenylate kinase [Methanohalophilus mahii DSM 5219]
          Length = 216

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 71/246 (28%), Gaps = 79/246 (32%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T    L  +     YD+            +  R  +      E G +AE   
Sbjct: 7   GPPGAGKGTQAKELSSY-----YDI------PHISTGDILRANVKQG--TELGKKAE--- 50

Query: 71  FAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-S 119
               R + V + +           P   +G   L D +          R   Q   LD  
Sbjct: 51  HYMNRGELVPDEVLIGIIKNRLAEPDCKKGY--LLDGY---------PRTIPQAEALDGI 99

Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYS-------------------------- 152
           L+EI     MP D  + +D+P +  + R+  RY                           
Sbjct: 100 LEEIG----MPLDVVLNIDVPDEELVGRLSGRYMCECGESYHVRFNPPQNEGVCDSCGGQ 155

Query: 153 --LRESACLDYFERKDVMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207
              RE    +   ++      K +     +        +    ++      SV  +I  +
Sbjct: 156 LYQREDDREEVIRQRLESYKNKTQPLIDYY-----ANKNLVVHINGEKDINSVFDDIRVV 210

Query: 208 VWELVQ 213
           + + + 
Sbjct: 211 LDKYLN 216


>gi|289423976|ref|ZP_06425768.1| signal recognition particle protein [Peptostreptococcus anaerobius
           653-L]
 gi|289155612|gb|EFD04285.1| signal recognition particle protein [Peptostreptococcus anaerobius
           653-L]
          Length = 452

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 9/89 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L  +L+ +  +  +       PAA     V+   L   V   G +  
Sbjct: 108 GLQGAGKTTTSGKLAGYLKGQGKNPLLVAGDVYRPAAIKQLQVVGEKLDIEVFTLGDKVS 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCD 96
            +  A A L+H          +  +++ D
Sbjct: 168 PVDIAKAALEHANK------NKNDLVIID 190


>gi|270488845|ref|ZP_06205919.1| signal recognition particle-docking protein FtsY [Yersinia pestis
           KIM D27]
 gi|270337349|gb|EFA48126.1| signal recognition particle-docking protein FtsY [Yersinia pestis
           KIM D27]
          Length = 580

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 383 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 438

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 439 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 484


>gi|268324337|emb|CBH37925.1| putative adenylate kinase [uncultured archaeon]
          Length = 178

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 3/114 (2%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GKT+    L       N  +       G         +     V+E+   A
Sbjct: 2   IAITGTPGVGKTSVCKALGIEFTDLNSLIAAEGFYTGVDKGSLIADL---NKVEEYVTRA 58

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           + ++  +     ++  +   L    +LL DR     +A Q   ++     LD +
Sbjct: 59  KPLLIDSHLAHLLKPEVAIVLRTNPLLLADRLKQKGFATQKIAENVDAETLDVI 112


>gi|317049541|ref|YP_004117189.1| ABC transporter-like protein [Pantoea sp. At-9b]
 gi|316951158|gb|ADU70633.1| ABC transporter related protein [Pantoea sp. At-9b]
          Length = 355

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+  G  G GKTT + LL 
Sbjct: 28 QGEFIAVLGPSGCGKTTLLRLLA 50


>gi|253582734|ref|ZP_04859954.1| iron(III)-transport ATP-binding protein sfuC [Fusobacterium
          varium ATCC 27725]
 gi|251835310|gb|EES63851.1| iron(III)-transport ATP-binding protein sfuC [Fusobacterium
          varium ATCC 27725]
          Length = 354

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + +G FI   G  G GKTT + +L 
Sbjct: 33 IKAGEFICLLGPSGCGKTTILRMLA 57


>gi|288941542|ref|YP_003443782.1| ABC transporter-like protein [Allochromatium vinosum DSM 180]
 gi|288896914|gb|ADC62750.1| ABC transporter related protein [Allochromatium vinosum DSM 180]
          Length = 266

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEAI 69
           G  GAGK+T I  + + L  +             PA E AR +  LS         + A 
Sbjct: 36  GPNGAGKSTLIKAVAQLLPYRGSIRLHGESLDQIPARERARRLAYLSQDDRVQWPISVAD 95

Query: 70  VFAAAR 75
           + A  R
Sbjct: 96  LVALGR 101


>gi|238798003|ref|ZP_04641492.1| Cell division protein ftsY [Yersinia mollaretii ATCC 43969]
 gi|238718106|gb|EEQ09933.1| Cell division protein ftsY [Yersinia mollaretii ATCC 43969]
          Length = 534

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 337 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 392

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 393 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 438


>gi|237739348|ref|ZP_04569829.1| MRP-family nucleotide-binding protein [Fusobacterium sp. 2_1_31]
 gi|229422956|gb|EEO38003.1| MRP-family nucleotide-binding protein [Fusobacterium sp. 2_1_31]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +LL + L++K Y V
Sbjct: 27 GVGKSTVTTLLAKELRKKGYSV 48


>gi|229136634|ref|ZP_04265314.1| ABC transporter CbaT [Bacillus cereus BDRD-ST196]
 gi|228646829|gb|EEL02984.1| ABC transporter CbaT [Bacillus cereus BDRD-ST196]
          Length = 686

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 11/138 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63
           ++F G  G+GKTT   LL  + + +  D++              R  +     + F   G
Sbjct: 458 VAFVGESGSGKTTIAKLLMNYYELQKGDIYYDDFHIKEINRTGLRDRIAYVSQESFFFSG 517

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKI-LLCD---RFLDSSYAYQGERDSSQHLFLDS 119
           +  + + F   R+  +E VI+          +CD   R+  S           Q   L  
Sbjct: 518 SIYDNLRFGLERMLSLEEVIQACKDACAHEFICDLSLRYETSLEENASNLSGGQRQRLAI 577

Query: 120 LQEISVQEVMPDCTIILD 137
            + +      PD  IILD
Sbjct: 578 ARAL---LKKPDI-IILD 591


>gi|256376829|ref|YP_003100489.1| ABC transporter [Actinosynnema mirum DSM 43827]
 gi|255921132|gb|ACU36643.1| ABC transporter related [Actinosynnema mirum DSM 43827]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          G  GAGK+T + LL   L      V +  EP G    E AR +
Sbjct: 37 GPNGAGKSTLLRLLCGVLAPTAGVVTLDGEPLGRSRRELARRL 79


>gi|254478695|ref|ZP_05092066.1| cytidylate kinase [Carboxydibrachium pacificum DSM 12653]
 gi|214035382|gb|EEB76085.1| cytidylate kinase [Carboxydibrachium pacificum DSM 12653]
          Length = 221

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 11/69 (15%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  GAGK+T    L + L    +    T            R + L    +    E 
Sbjct: 5  IAIDGPAGAGKSTVAKKLAKLL---GFTYIDT--------GAMYRAITLKVLRENISLED 53

Query: 67 EAIVFAAAR 75
          E  +   AR
Sbjct: 54 EERIVEVAR 62


>gi|205356144|ref|ZP_03222911.1| possible adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni CG8421]
 gi|205345987|gb|EDZ32623.1| possible adenylylsulfate kinase [Campylobacter jejuni subsp.
          jejuni CG8421]
          Length = 170

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
          + G    A+
Sbjct: 55 KQGRIDMAL 63


>gi|254391362|ref|ZP_05006565.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294814498|ref|ZP_06773141.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326442887|ref|ZP_08217621.1| putative ABC transporter ATP-binding protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197705052|gb|EDY50864.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327097|gb|EFG08740.1| ABC transporter ATP-binding protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 540

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 11/76 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + LL   L+     V        + +  G        R +L+S       
Sbjct: 37  GANGAGKTTLLRLLSGELKAHGGTVTVSGGLGVMPQFIGSVRDERTVRDLLVSLAQPRVR 96

Query: 64  AEAEAIVFAAARLDHV 79
             A A+       +H+
Sbjct: 97  EAARAV----DEAEHL 108


>gi|197336697|ref|YP_002158784.1| arsenical pump-driving ATPase [Vibrio fischeri MJ11]
 gi|197313949|gb|ACH63398.1| arsenical pump-driving ATPase [Vibrio fischeri MJ11]
          Length = 582

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 9/38 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           M  G         G GKTT  + +   L  +  DVH+T
Sbjct: 334 MGKG---------GVGKTTMAAAIASKLAEQGLDVHLT 362


>gi|149039178|gb|EDL93398.1| HypB, AroK, ADK and rho factor domain containing protein
           RGD1303144, isoform CRA_b [Rattus norvegicus]
          Length = 450

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 33/202 (16%)

Query: 47  AEAARHVLLSCGVDEFGAEAEAIVFAAARLDH-VENVIRPALMEGKIL---LCDRFLDSS 102
            +  +  LLS            ++  A   +  + ++I P   +   +   +  R L   
Sbjct: 251 GKKLQAALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPFFEKRMTVPDSIITRVLTER 310

Query: 103 YAYQ-----GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157
              Q     G         LD  + ++     P+    L++P+D  L+R+  R +   + 
Sbjct: 311 LKQQDCIQKGWVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDSILERLTLRRTDPVTG 370

Query: 158 CLDYF----------ERKDVMIHE-KRRQIFLDIA-----------RNQPDRCHIVDSAH 195
             + F          E +  ++   K  + ++ +                DR  IV+   
Sbjct: 371 --ERFHLMYKPPPTIEVQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYDRAIIVNGDQ 428

Query: 196 SFQSVATNILNIVWELVQKRVS 217
              +V   I + +   + ++V+
Sbjct: 429 DPYTVFEYIESGIINPLPRKVT 450


>gi|120401269|ref|YP_951098.1| regulatory protein LuxR [Mycobacterium vanbaalenii PYR-1]
 gi|119954087|gb|ABM11092.1| regulatory protein, LuxR [Mycobacterium vanbaalenii PYR-1]
          Length = 884

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
          + F G  G+GKTT    +   L+ +      TR   GT   +A 
Sbjct: 36 VVFVGEPGSGKTTLARAIAATLRSEG---VTTRFVLGTDTGQAV 76


>gi|52842876|ref|YP_096675.1| cell division membrane protein FtsY [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629987|gb|AAU28728.1| cell division membrane protein FtsY [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 368

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  Q++   V +
Sbjct: 170 GVNGAGKTTTIGKLAKQFQKQGKKVML 196


>gi|120600006|ref|YP_964580.1| AAA ATPase [Shewanella sp. W3-18-1]
 gi|146291276|ref|YP_001181700.1| AAA ATPase [Shewanella putrefaciens CN-32]
 gi|120560099|gb|ABM26026.1| AAA ATPase [Shewanella sp. W3-18-1]
 gi|145562966|gb|ABP73901.1| AAA ATPase [Shewanella putrefaciens CN-32]
 gi|319428052|gb|ADV56126.1| AAA ATPase [Shewanella putrefaciens 200]
          Length = 323

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVD 60
           G  I+  G+ G+GKTT +S L+  L ++   +    ++ E   T        +      D
Sbjct: 40  GQLIALSGVVGSGKTTTLSRLQDLLAKEKKVIVAKSLSVEKTKTNLGTLITALFYDVSGD 99

Query: 61  E 61
           +
Sbjct: 100 K 100


>gi|153948996|ref|YP_001399236.1| cell division protein FtsY [Yersinia pseudotuberculosis IP 31758]
 gi|152960491|gb|ABS47952.1| cell division protein FtsY [Yersinia pseudotuberculosis IP 31758]
          Length = 541

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 344 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 399

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 400 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 445


>gi|320536286|ref|ZP_08036329.1| thiol reductant ABC exporter, CydC subunit [Treponema phagedenis
           F0421]
 gi|320146846|gb|EFW38419.1| thiol reductant ABC exporter, CydC subunit [Treponema phagedenis
           F0421]
          Length = 591

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           MN G  I+  G  GAGK+T I L++  +Q +   +         PAA+  R++
Sbjct: 372 MNKGEKIAVLGKNGAGKSTLIKLIRGDIQPQAGSLLFDFGKTKIPAADFGRNI 424


>gi|317146776|ref|XP_001821651.2| ABC transporter [Aspergillus oryzae RIB40]
          Length = 623

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          + G  I+  G  G GKTT +++L R        
Sbjct: 59 HHGQLIALMGPSGCGKTTLLNVLARRTASAGAK 91


>gi|306832568|ref|ZP_07465708.1| adenylate kinase [Streptococcus bovis ATCC 700338]
 gi|304425326|gb|EFM28452.1| adenylate kinase [Streptococcus bovis ATCC 700338]
          Length = 213

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 79/233 (33%), Gaps = 59/233 (25%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T  + +             T         +  R  +      E G  A++ +
Sbjct: 7   GLPGAGKGTQAAKIVEKF---GVAHIST--------GDMFRAAM--ANKTEMGVLAKSFI 53

Query: 71  FAAARLDHVEN-----VIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               + + V +     +++  L +  I     L D +  +            H   ++L 
Sbjct: 54  ---DKGELVPDEVTNGIVKERLAQDDIAGKGFLLDGYPRT--------IEQAHALDETLN 102

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---------------DYFERKD 166
            + ++    D  I +++  +  ++R+  R   R++                  D+++R+D
Sbjct: 103 NLELKL---DGVINIEVNPESLIERLSGRIINRKTGETFHKVFNPPVGDYNEDDFYQRED 159

Query: 167 VMIHEKRRQIFLDIARNQP--DRCHI------VDSAHSFQSVATNILNIVWEL 211
                 +R++ ++IA+  P  +          +        V  +I+  +  L
Sbjct: 160 DKPETVKRRLDVNIAQGAPIIEHYRKAGIVFDIQGNQDIDDVFADIVKAISSL 212


>gi|299771374|ref|YP_003733400.1| signal recognition particle protein [Acinetobacter sp. DR1]
 gi|298701462|gb|ADI92027.1| signal recognition particle protein [Acinetobacter sp. DR1]
          Length = 471

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 14/126 (11%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G++GAGKTT  + L RFL +R+   V         PAA   + +      +   AE  A 
Sbjct: 107 GLQGAGKTTTAAKLARFLKERQKKKVMTVSADVYRPAA--IKQL------ETVSAEVGAG 158

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
             A+   +   +++  A+ + KI    +F D        R       +D ++E+    V 
Sbjct: 159 FIASDASEKPIDIVNRAIEQAKI----QFADVLIVDTAGRLHVDEDMMDEIKEL-HAAVK 213

Query: 130 PDCTII 135
           P  T+ 
Sbjct: 214 PTETLF 219


>gi|296270856|ref|YP_003653488.1| ABC transporter-like protein [Thermobispora bispora DSM 43833]
 gi|296093643|gb|ADG89595.1| ABC transporter related protein [Thermobispora bispora DSM 43833]
          Length = 549

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 12/84 (14%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-----PGGTPAAEAARHVLLSCGVDE 61
           I+  G  GAGKTT +  +   L      V VT +     P      + +R VL +     
Sbjct: 374 IALLGPNGAGKTTLLRTITGELAPAGGTVRVTVDGVGYLPQRLDVLDGSRSVLENVRAAA 433

Query: 62  FGA-----EAEA--IVFAAARLDH 78
            GA      AE    +F   R + 
Sbjct: 434 PGASVNRIRAELARFLFRGDRAEL 457


>gi|295706801|ref|YP_003599876.1| aliphatic sulfonates ABC transporter ATP-binding protein SsuB
          [Bacillus megaterium DSM 319]
 gi|294804460|gb|ADF41526.1| aliphatic sulfonates ABC transporter, ATP-binding protein SsuB
          [Bacillus megaterium DSM 319]
          Length = 265

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI+  G  G GK+T + ++ 
Sbjct: 47 INKGEFITVIGPSGCGKSTLLKMIA 71


>gi|261211115|ref|ZP_05925404.1| adenylylsulfate kinase [Vibrio sp. RC341]
 gi|260839616|gb|EEX66227.1| adenylylsulfate kinase [Vibrio sp. RC341]
          Length = 208

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLT 109


>gi|258625778|ref|ZP_05720657.1| adenylylsulfate kinase [Vibrio mimicus VM603]
 gi|258582016|gb|EEW06886.1| adenylylsulfate kinase [Vibrio mimicus VM603]
          Length = 220

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 49  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 91

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 92  GFSEQDRRENIRRIGELAKLMADAGLIVLT 121


>gi|297570375|ref|YP_003691719.1| helicase, RecD/TraA family [Desulfurivibrio alkaliphilus AHT2]
 gi|296926290|gb|ADH87100.1| helicase, RecD/TraA family [Desulfurivibrio alkaliphilus AHT2]
          Length = 822

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 14/33 (42%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            F    G  G GKTT   +L R L+     V +
Sbjct: 343 RFAILTGGPGCGKTTATRVLVRLLEAMGQRVVL 375


>gi|238750712|ref|ZP_04612211.1| Cell division protein ftsY [Yersinia rohdei ATCC 43380]
 gi|238711102|gb|EEQ03321.1| Cell division protein ftsY [Yersinia rohdei ATCC 43380]
          Length = 555

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 358 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 413

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 414 TGADSASVIFDAIQAAKARGVDVL--------LADTAGRLQNKAHLMEELKKIV 459


>gi|239817301|ref|YP_002946211.1| adenylylsulfate kinase [Variovorax paradoxus S110]
 gi|239803878|gb|ACS20945.1| adenylylsulfate kinase [Variovorax paradoxus S110]
          Length = 197

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 29/158 (18%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T  + L+  L+ +                +  R  L            E   
Sbjct: 28  GLSGAGKSTIAAALQPLLRARGVGAV-------RLDGDEVRKGLNHGLGFSAEDRHE--- 77

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R+ H+  ++     +G + +    + S    Q  RD ++ +   S  E+ V     
Sbjct: 78  -NIRRIAHIARLLN---EQGMVAIVA--VVSPL--QALRDLARSIVGPSYHEVFVHAP-- 127

Query: 131 DCTIILDL----PVDIGLKRVQNRYSLRESACLDYFER 164
                L++           R +     R +   D FE 
Sbjct: 128 -----LEVCERRDPKGMYARARQGAIARFTGVSDIFEA 160


>gi|169628634|ref|YP_001702283.1| CysN/CysC bifunctional enzyme [Mycobacterium abscessus ATCC 19977]
 gi|169240601|emb|CAM61629.1| Probable CysN/CysC bifunctional enzyme [Mycobacterium abscessus]
          Length = 625

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 65/211 (30%), Gaps = 38/211 (18%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G  I F G+  +GK+T    ++R L       ++          +  RH L       
Sbjct: 451 QRGAIIWFTGLPASGKSTIAVAVERALVESGQVAYLL-------DGDNLRHGLSDDLGFS 503

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
            G  AE       R+ H+  +               F D+         S      ++ +
Sbjct: 504 PGDRAE----NIRRVSHLTRL---------------FADAGVVALASLVSPLRSDRETAR 544

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181
            I+    +P   + +  P+    KR       R  A     E K +   E   +     A
Sbjct: 545 SINAAAKLPFIEVYIATPLAECEKRDPKGLYARARAG----ELKGLTGVEAPYE-----A 595

Query: 182 RNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211
              P+   ++D+       +   +L+++   
Sbjct: 596 PENPE--LVLDTTGADIDELVAQVLDVLNRA 624


>gi|167468884|ref|ZP_02333588.1| cell division protein [Yersinia pestis FV-1]
          Length = 589

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 392 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 447

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 448 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 493


>gi|126727984|ref|ZP_01743806.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Rhodobacterales bacterium HTCC2150]
 gi|126702734|gb|EBA01845.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Rhodobacterales bacterium HTCC2150]
          Length = 350

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 9/51 (17%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
          G FI   G  G GK+T + ++         +   T   G     +   + L
Sbjct: 29 GEFIVIVGPSGCGKSTLLRMVA------GLETVTT---GEVSIGDKMINDL 70


>gi|119718422|ref|YP_925387.1| GDP-mannose 4,6-dehydratase [Nocardioides sp. JS614]
 gi|119539083|gb|ABL83700.1| GDP-mannose 4,6-dehydratase [Nocardioides sp. JS614]
          Length = 340

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 26/85 (30%), Gaps = 13/85 (15%)

Query: 1  MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
          M     I+   G +G+        L   L  K Y VH  R    T  +    H+      
Sbjct: 1  MAKTALITGITGQDGS-------YLAELLLAKGYVVHGLRRRSSTFNSSRIEHLYQDPH- 52

Query: 60 DEFGAEAEAIVFAAARLDHVENVIR 84
               +    +  A   D   N+IR
Sbjct: 53 ---DPDTRLFLHYADLTD-AANLIR 73


>gi|161523215|ref|YP_001578227.1| ABC transporter-like protein [Burkholderia multivorans ATCC
          17616]
 gi|189348928|ref|YP_001944556.1| sulfonate/nitrate/taurine transporter ATP-binding protein
          [Burkholderia multivorans ATCC 17616]
 gi|221201783|ref|ZP_03574820.1| ABC transporter, ATPase subunit [Burkholderia multivorans CGD2M]
 gi|221207712|ref|ZP_03580720.1| ABC transporter, ATPase subunit [Burkholderia multivorans CGD2]
 gi|160340644|gb|ABX13730.1| ABC transporter related [Burkholderia multivorans ATCC 17616]
 gi|189332950|dbj|BAG42020.1| sulfonate/nitrate/taurine transport system ATP-binding protein
          [Burkholderia multivorans ATCC 17616]
 gi|221172558|gb|EEE04997.1| ABC transporter, ATPase subunit [Burkholderia multivorans CGD2]
 gi|221178203|gb|EEE10613.1| ABC transporter, ATPase subunit [Burkholderia multivorans CGD2M]
          Length = 265

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G FI+  G  G GK+T ++L+   L+  + +V V   P
Sbjct: 41 RGEFIAIVGPTGCGKSTTLNLITGLLKPASGEVRVMGRP 79


>gi|71906074|ref|YP_283661.1| hypothetical protein Daro_0434 [Dechloromonas aromatica RCB]
 gi|71845695|gb|AAZ45191.1| Protein of unknown function DUF344 [Dechloromonas aromatica RCB]
          Length = 372

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 28/94 (29%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P      +                  
Sbjct: 149 ILFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPSEMERGQW----------------- 191

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
               +    + H+          G+I+L DR   
Sbjct: 192 ----YFQRYVQHLPT-------NGEIVLFDRSWY 214


>gi|83769514|dbj|BAE59649.1| unnamed protein product [Aspergillus oryzae]
          Length = 636

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          + G  I+  G  G GKTT +++L R        
Sbjct: 59 HHGQLIALMGPSGCGKTTLLNVLARRTASAGAK 91


>gi|20807797|ref|NP_622968.1| cytidylate kinase [Thermoanaerobacter tengcongensis MB4]
 gi|22001654|sp|Q8RA78|KCY_THETN RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine
          monophosphate kinase; Short=CMP kinase
 gi|20516354|gb|AAM24572.1| Cytidylate kinase [Thermoanaerobacter tengcongensis MB4]
          Length = 224

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 11/69 (15%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+ +G  GAGK+T    L + L    +    T            R + L    +    E 
Sbjct: 8  IAIDGPAGAGKSTVAKKLAKLL---GFTYIDT--------GAMYRAITLKVLRENISLED 56

Query: 67 EAIVFAAAR 75
          E  +   AR
Sbjct: 57 EERIVEVAR 65


>gi|15921361|ref|NP_377030.1| ABC transporter ATP-binding protein [Sulfolobus tokodaii str. 7]
 gi|15622147|dbj|BAB66139.1| 367aa long hypothetical ABC transporter ATP-binding protein
          [Sulfolobus tokodaii str. 7]
          Length = 367

 Score = 35.4 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F+   G  G GKTT + ++   L++    V++
Sbjct: 32 KGEFVVILGPSGEGKTTILKIIAGLLRQDKGHVYL 66


>gi|329927625|ref|ZP_08281772.1| hypothetical protein HMPREF9412_2955 [Paenibacillus sp. HGF5]
 gi|328938323|gb|EGG34714.1| hypothetical protein HMPREF9412_2955 [Paenibacillus sp. HGF5]
          Length = 283

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48
          M +   I  EG+ G GK+T   ++   L   N +  +  E      A+
Sbjct: 1  MKT-KLIMVEGLPGFGKSTTSRMIHAILSEHNIESRLVVEGDTDHPAD 47


>gi|326933941|ref|XP_003213056.1| PREDICTED: dephospho-CoA kinase domain-containing protein-like
           [Meleagris gallopavo]
          Length = 229

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 80/239 (33%), Gaps = 54/239 (22%)

Query: 5   LFISFEGIEG---AGKTTHISLLKR------------------FLQRKNYDVHVTREPGG 43
           +F+   G+ G   +GK+T +++L+                    L+     V        
Sbjct: 1   MFLV--GLSGGIASGKSTVVAVLRELGCAVIDADVIARSVVQPRLKAYQQIVRCFGPEIL 58

Query: 44  TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103
             + E  R  L    +     E   ++ A    +  + +++  L     +L  R++    
Sbjct: 59  QESGEIDREAL--GNIIFSHPEKRRLLNAITHPEIQKEMLKQVLK--YFVLGYRYV---- 110

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163
                 D         L +          T+++       L R++ R  L ++       
Sbjct: 111 ----ILDIPLLFETKRLTKFMKH------TVLVYCDPQTQLARLRKRSGLSQAEAEARIA 160

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222
            + + + EKRR     +A       H++D++   +S    +L  +   ++  +  L ++
Sbjct: 161 SQ-LPLDEKRR-----LAT------HVIDNSGDRESTRQQVLR-LHARLEDSLDFLWAR 206


>gi|326433497|gb|EGD79067.1| hypothetical protein PTSG_02035 [Salpingoeca sp. ATCC 50818]
          Length = 303

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNY 33
          G+ G+GK+T  +LL+  L ++ Y
Sbjct: 8  GLPGSGKSTLCALLRELLVKQGY 30


>gi|312797361|ref|YP_004030283.1| cell division protein ftsY [Burkholderia rhizoxinica HKI 454]
 gi|312169136|emb|CBW76139.1| Cell division protein ftsY [Burkholderia rhizoxinica HKI 454]
          Length = 553

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           + I+  G+ GAGKTT I  L + LQ  N  V +    G T  A A   +++    +  
Sbjct: 356 MMIA--GVNGAGKTTSIGKLAKHLQSFNQSVMLAA--GDTFRAAAREQLVIWGQRNNV 409


>gi|303229585|ref|ZP_07316373.1| excinuclease ABC, A subunit [Veillonella atypica ACS-134-V-Col7a]
 gi|302515710|gb|EFL57664.1| excinuclease ABC, A subunit [Veillonella atypica ACS-134-V-Col7a]
          Length = 950

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           GLF    G+ G+GK+T I       L   L R  + V   +E  G    +   ++
Sbjct: 630 GLFTVVTGVSGSGKSTLINEILYKGLANQLYRSYHKVGAHKEIRGLEHIDKIINI 684


>gi|319760990|ref|YP_004124927.1| shikimate kinase [Alicycliphilus denitrificans BC]
 gi|330822852|ref|YP_004386155.1| Shikimate kinase [Alicycliphilus denitrificans K601]
 gi|317115551|gb|ADU98039.1| Shikimate kinase [Alicycliphilus denitrificans BC]
 gi|329308224|gb|AEB82639.1| Shikimate kinase [Alicycliphilus denitrificans K601]
          Length = 180

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 41/182 (22%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G+GK+T    L R L           +        + R+     G   F     A++
Sbjct: 9   GMPGSGKSTVGRQLARRL---GLPFIDLDQRLEQQLGTSIRNYFEQHGEQAFRDHESALL 65

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
            A A               G ++L            G     +    ++L+        P
Sbjct: 66  AALAD------------EPGGMILST----------GGGAVLRPENREALRR-----SFP 98

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI--ARNQPDRC 188
              + L    +   +R+++  +       D           + R+++ D      +  R 
Sbjct: 99  H-VMYLRASPEEIFRRIKHDRTRPLLQVADPL--------ARLRELYRDRDPLYRETARY 149

Query: 189 HI 190
            I
Sbjct: 150 VI 151


>gi|289641870|ref|ZP_06474026.1| CO dehydrogenase maturation factor-like protein [Frankia symbiont
          of Datisca glomerata]
 gi|289508279|gb|EFD29222.1| CO dehydrogenase maturation factor-like protein [Frankia symbiont
          of Datisca glomerata]
          Length = 345

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
          I+F G  G+GKTT  +L  R L    + V 
Sbjct: 3  IAFVGKGGSGKTTLSALFCRRLAAHGHPVL 32


>gi|281423685|ref|ZP_06254598.1| deoxynucleoside kinase family protein [Prevotella oris F0302]
 gi|281402237|gb|EFB33068.1| deoxynucleoside kinase family protein [Prevotella oris F0302]
          Length = 206

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 67/215 (31%), Gaps = 43/215 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLS---CGVDEF 62
           I+  G  G+GKTT   LL +               G TP  EA   +  L      +  +
Sbjct: 3   IAIAGNIGSGKTTLTELLAKH-------------YGWTPKYEAVDYNPYLEDYYKDIPRW 49

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQH 114
               E         D ++       M  + ++ DR +         ++Y      +    
Sbjct: 50  SFNMEVFFLKERFKDLLQ---LDQNMNKETIVQDRSIYEGVYVFTKNNYKMGNMNERDFQ 106

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDV---MIH 170
            +++    ++     PD  I L   V   +K +QNR    E    L Y E  +       
Sbjct: 107 TYMELFDSMTHILHYPDLMIYLKSSVPHLVKNIQNRGREYEQKMPLAYLESLNDLYEDFI 166

Query: 171 EKRRQI-----------FLDIARNQPDRCHIVDSA 194
            ++ +            +L   R+       +D+ 
Sbjct: 167 YRKYKGKVLVVDVDDIDYLHSKRDFSGIIDKIDAN 201


>gi|229829498|ref|ZP_04455567.1| hypothetical protein GCWU000342_01589 [Shuttleworthia satelles
          DSM 14600]
 gi|229791929|gb|EEP28043.1| hypothetical protein GCWU000342_01589 [Shuttleworthia satelles
          DSM 14600]
          Length = 481

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G FI   G+ G GKT+ + LL
Sbjct: 29 KGEFIVITGLSGCGKTSLLRLL 50


>gi|271963313|ref|YP_003337509.1| daunorubicin resistance ABC transporter ATPase [Streptosporangium
           roseum DSM 43021]
 gi|270506488|gb|ACZ84766.1| daunorubicin resistance ABC transporter ATPase subunit
           [Streptosporangium roseum DSM 43021]
          Length = 319

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 83/238 (34%), Gaps = 53/238 (22%)

Query: 11  GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + +L  F        +   +DV            E   +V  + GVD+  
Sbjct: 44  GPNGAGKTTTVRMLATFTAPTSGTARVAGHDVVK----EAAKVRERIGYVSQAGGVDDNA 99

Query: 64  AEAEAIVFAAA-----------RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
              E+++ +A            R D +      +L E    + DR + S    Q  R + 
Sbjct: 100 PGRESLLLSARLAGLSRSQAHTRADELLETF--SLTE----IADRPVRSLSGGQKRRFAL 153

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
               ++           P     LD     GL   QNR +L +       +   V++   
Sbjct: 154 AIGLVN----------RPPLVF-LD-EPTTGLD-PQNRANLWDEVRSLRDQGTSVLLTT- 199

Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225
               +LD A    DR  IVD     +  + + +   +   V  L   R+  L++  ++
Sbjct: 200 ---HYLDEADALCDRLVIVDHGLIVAEGTPEELKKEVAGDVVTL---RLDDLAAAGEL 251


>gi|256827392|ref|YP_003151351.1| Adenylate kinase [Cryptobacterium curtum DSM 15641]
 gi|256583535|gb|ACU94669.1| Adenylate kinase [Cryptobacterium curtum DSM 15641]
          Length = 209

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 73/231 (31%), Gaps = 55/231 (23%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G  GAGK T  + L                       +  R  +        G +A
Sbjct: 3   IVLLGAPGAGKGTQAAKLVEKF-----------GLCHISTGDILRAAVRDQ--TPLGVKA 49

Query: 67  EAIVFAAARL--DHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
           +  + A   +  D + ++++  + +      ++ D F  ++   Q          L    
Sbjct: 50  KTYMDAGDLVPDDLIIDLMKERIQQPDTTAGVILDGFPRTTT--QAVALDGMLASLS--- 104

Query: 122 EISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKD 166
                   P D  +++D+  ++ + R+ +R +      +              D ++R D
Sbjct: 105 -------RPLDAALLIDVDSEVIVGRLTSRRTCSSCGHIGSTADGAQCPVCGGDMYQRAD 157

Query: 167 ---------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                    + ++EK     +D  R   D    +D     Q V  +++  +
Sbjct: 158 DNEATVRNRLEVYEKSTAPLIDYYRG-SDLLVQIDGDRDQQVVFDDVVEKL 207


>gi|296130375|ref|YP_003637625.1| phosphoribulokinase / uridine kinase family [Cellulomonas flavigena
           DSM 20109]
 gi|296022190|gb|ADG75426.1| phosphoribulokinase / uridine kinase family [Cellulomonas flavigena
           DSM 20109]
          Length = 222

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 52/170 (30%), Gaps = 51/170 (30%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDV--------HVTRE---------PGG----TPAA 47
            +G +GAGKTT    L   L+     V        H +RE         P G    +   
Sbjct: 30  VDGTDGAGKTTFADELAVVLRASGRAVLRASVDGFHHSREVRYRRGRTSPEGFFRDSYDL 89

Query: 48  EAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVI----RPALMEGKILLCDRFLDSS 102
           +A R VLL   G D  G          A  DH  +         + +  +L+ D      
Sbjct: 90  DALRTVLLDPLGPDHVGPRR----VRTAVHDHTTDTDPGTPWHVVDDATVLVLD------ 139

Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152
                     Q   L S+          D  + L++P      R+  R  
Sbjct: 140 ------GIFLQRDELRSVW---------DLAVWLEVPFAQTYARMAVRDG 174


>gi|225374880|ref|ZP_03752101.1| hypothetical protein ROSEINA2194_00503 [Roseburia inulinivorans
          DSM 16841]
 gi|225213263|gb|EEG95617.1| hypothetical protein ROSEINA2194_00503 [Roseburia inulinivorans
          DSM 16841]
          Length = 239

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I+ +G  GAGK+T    L + L
Sbjct: 21 IAIDGPAGAGKSTIAKKLAKEL 42


>gi|170768504|ref|ZP_02902957.1| dephospho-CoA kinase [Escherichia albertii TW07627]
 gi|170122608|gb|EDS91539.1| dephospho-CoA kinase [Escherichia albertii TW07627]
          Length = 206

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192
            +++D+  +  LKR   R  +           + ++  +  R+  L +A +      ++D
Sbjct: 127 VLVVDVSPETQLKRTMRRDDVSREHV------EQILAAQATREARLAVADD------VID 174

Query: 193 SAHSFQSVATNILNIVWELVQ 213
           +  +  ++A+++  +    +Q
Sbjct: 175 NNGAPDAIASDVARLHAHYLQ 195


>gi|162447170|ref|YP_001620302.1| guanylate kinase [Acholeplasma laidlawii PG-8A]
 gi|161985277|gb|ABX80926.1| guanylate kinase [Acholeplasma laidlawii PG-8A]
          Length = 205

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 63/215 (29%), Gaps = 42/215 (19%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGV 59
            GL I   G  G GK T    L   ++  N +      TR P          + +     
Sbjct: 6   RGLLIVISGPSGVGKGTVRKALFD-MKNHNLEYSVSVTTRAPRVGEVDGKDYYFVNRAAF 64

Query: 60  DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
           +E   +   + +A     +    ++ +   L +GK ++ +  +D   A Q          
Sbjct: 65  EEMIRQDRFLEYAEFVGSYYGTPKDKVEEMLDKGKEVVLEIEVDG--ALQVRERMK---- 118

Query: 117 LDSLQEISVQEVMPDCTIILDLPV-DIGL-KRVQNRYSLRESACLDYFERKDVMIHEKRR 174
                         D   I  +P     L +R+  R +         F++ +        
Sbjct: 119 --------------DAVFIFLVPPSKKALYERLSRRGTDTPEIVNKRFQKAESEF----- 159

Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209
                +A    D   +        + A  I+ I+ 
Sbjct: 160 ----KLAYKY-DYIVV---NDDVNNAADRIMAIIR 186


>gi|148240865|ref|YP_001226252.1| excinuclease ABC subunit A [Synechococcus sp. WH 7803]
 gi|147849404|emb|CAK24955.1| Excinuclease ATPase subunit (Excinuclease ABC subunit A)
           [Synechococcus sp. WH 7803]
          Length = 993

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL 54
           G  +S  G+ G+GK+T +  LL   L+    + V      G     ++   V+
Sbjct: 674 GRLVSVTGVSGSGKSTLVNELLHPALEHGLGHKVPFPNGLGELRGIKSIDKVI 726


>gi|110680779|ref|YP_683786.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Roseobacter denitrificans OCh 114]
 gi|109456895|gb|ABG33100.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein
          [Roseobacter denitrificans OCh 114]
          Length = 359

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G F+   G  G GK+T + ++ 
Sbjct: 29 GKFVVLLGPSGCGKSTLLRMIA 50


>gi|88602881|ref|YP_503059.1| ABC transporter-like protein [Methanospirillum hungatei JF-1]
 gi|88188343|gb|ABD41340.1| ABC transporter related protein [Methanospirillum hungatei JF-1]
          Length = 478

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 29/86 (33%), Gaps = 9/86 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G FI+  G  G+GKTT +  L   L+     VHV      T        ++   G+    
Sbjct: 283 GEFIAILGENGSGKTTLVKHLNGLLRPDEGSVHVRSLDAATA---PVIDLVKQTGLVFQN 339

Query: 64  AEAEAIVFAAARLDHVENVIRPALME 89
            +           D V + I   L  
Sbjct: 340 PDTMLF------ADSVRDEIMFGLEN 359


>gi|49481169|ref|YP_036099.1| branched-chain amino acid ABC transporter ATP-binding protein
          [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|228933264|ref|ZP_04096120.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar andalousiensis BGSC
          4AW1]
 gi|49332725|gb|AAT63371.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|228826425|gb|EEM72202.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar andalousiensis BGSC
          4AW1]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|88809368|ref|ZP_01124876.1| excinuclease ABC subunit A [Synechococcus sp. WH 7805]
 gi|88786587|gb|EAR17746.1| excinuclease ABC subunit A [Synechococcus sp. WH 7805]
          Length = 993

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL 54
           G  +S  G+ G+GK+T +  LL   L+    + V      G     ++   V+
Sbjct: 674 GRLVSVTGVSGSGKSTLVNELLHPALEHGLGHKVPFPNGLGELRGIKSIDKVI 726


>gi|330508068|ref|YP_004384496.1| CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
          [Methanosaeta concilii GP-6]
 gi|328928876|gb|AEB68678.1| CobQ/CobB/MinD/ParA nucleotide binding domain protein
          [Methanosaeta concilii GP-6]
          Length = 261

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          M     I F G  G GKTT +S L R L R  Y V V
Sbjct: 1  MKR---IIFSGKGGVGKTTILSNLARLLARDGYRVLV 34


>gi|328957709|ref|YP_004375095.1| deoxyadenosine/deoxycytidine kinase [Carnobacterium sp. 17-4]
 gi|328674033|gb|AEB30079.1| deoxyadenosine/deoxycytidine kinase [Carnobacterium sp. 17-4]
          Length = 222

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 36/224 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I   G+ GAGK+T+   +   L     +             E                E 
Sbjct: 9   IVLAGMIGAGKSTYTKFISEAL---GSEAFYES-VDDNRILEKFYE----------NPER 54

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-----SQHLFLDS 119
            A       L+     I+ A      +L DR  + D+ +      +          +LD 
Sbjct: 55  WAFSLQIYFLNTRFRSIKAAFKHENNVL-DRSIYEDALFTRINYEEGNMSDAEMDTYLDL 113

Query: 120 LQEI-----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD-VMIHEKR 173
           L  +     ++ +  PD  I L   +D  L R++ R    E       E    +  +   
Sbjct: 114 LDNMMEELDNMPKKSPDLLIYLRGSLDTVLNRIEKRGRTFEQIG----ENSGLLDYYTHL 169

Query: 174 RQIFLDIARNQPDR-CHIVDSAH-SFQSV--ATNILNIVWELVQ 213
              +             I+D      + +  A  +LN+V E ++
Sbjct: 170 HSQYDSWFNAYDKSATLIIDINQYDLEKLEDAEKVLNMVTEKLE 213


>gi|325840709|ref|ZP_08167129.1| ABC transporter, ATP-binding protein [Turicibacter sp. HGF1]
 gi|325490215|gb|EGC92550.1| ABC transporter, ATP-binding protein [Turicibacter sp. HGF1]
          Length = 509

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKN 32
             EG  G+GKTT I  L   +    
Sbjct: 367 VIEGPNGSGKTTLIKSLLEQIPYDG 391


>gi|324507951|gb|ADY43362.1| Signal recognition particle receptor subunit alpha [Ascaris suum]
          Length = 657

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           I F G+ G GK+T+++ +  +L    + V +    G T  A A   +
Sbjct: 447 IVFCGVNGVGKSTNLAKITFWLNENGHRVLIAA--GDTFRAGAVEQL 491


>gi|317486090|ref|ZP_07944939.1| ABC transporter [Bilophila wadsworthia 3_1_6]
 gi|316922655|gb|EFV43892.1| ABC transporter [Bilophila wadsworthia 3_1_6]
          Length = 239

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
          I+  G  G GK+T + LL   L     +  +   PG TP  E    +    G +  
Sbjct: 35 IALIGPSGCGKSTALDLLAMILPPSGAEKFLFNAPGDTP--EDVAELWRRGGRERM 88


>gi|315047648|ref|XP_003173199.1| multidrug resistance protein 2 [Arthroderma gypseum CBS 118893]
 gi|311343585|gb|EFR02788.1| multidrug resistance protein 2 [Arthroderma gypseum CBS 118893]
          Length = 221

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G FI+  G  G GK+T ++LL+RF 
Sbjct: 6  GSFIALVGPSGCGKSTLLALLERFF 30


>gi|308177268|ref|YP_003916674.1| signal recognition particle protein Ffh [Arthrobacter arilaitensis
           Re117]
 gi|307744731|emb|CBT75703.1| signal recognition particle protein Ffh [Arthrobacter arilaitensis
           Re117]
          Length = 521

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++GAGKTT    L + L+ + + 
Sbjct: 107 GLQGAGKTTLAGKLAKHLKAEGHT 130


>gi|300855716|ref|YP_003780700.1| putative ABC transporter ATPase [Clostridium ljungdahlii DSM
          13528]
 gi|300435831|gb|ADK15598.1| predicted ABC transporter, ATPase component [Clostridium
          ljungdahlii DSM 13528]
          Length = 250

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G FIS  G  G GK+T + L+ +  +    D+ +
Sbjct: 28 KGEFISIVGPSGCGKSTVLRLICKLEKAFEGDIIL 62


>gi|262363544|gb|ACY60265.1| cell division protein [Yersinia pestis D106004]
          Length = 544

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 347 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 402

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 403 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 448


>gi|258622751|ref|ZP_05717769.1| adenylylsulfate kinase [Vibrio mimicus VM573]
 gi|258584939|gb|EEW09670.1| adenylylsulfate kinase [Vibrio mimicus VM573]
          Length = 220

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 49  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 91

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 92  GFSEQDRRENIRRIGELAKLMADAGLIVLT 121


>gi|251782509|ref|YP_002996811.1| ABC transporter ATP-binding protein [Streptococcus dysgalactiae
          subsp. equisimilis GGS_124]
 gi|242391138|dbj|BAH81597.1| ABC transporter ATP-binding protein [Streptococcus dysgalactiae
          subsp. equisimilis GGS_124]
          Length = 232

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          SG  I   G  G+GKTT I L+   LQ    D+ +
Sbjct: 29 SGKIIGLLGPNGSGKTTLIKLINGLLQPNKGDIVI 63


>gi|229900065|ref|ZP_04515202.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229686845|gb|EEO78924.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis biovar Orientalis str. India 195]
          Length = 556

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 359 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 414

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 415 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 460


>gi|206558691|ref|YP_002229451.1| glycerol-3-phosphate transporter ATP-binding subunit
          [Burkholderia cenocepacia J2315]
 gi|198034728|emb|CAR50595.1| ABC transporter ATP-binding protein [Burkholderia cenocepacia
          J2315]
          Length = 361

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FI   G  G GK+T + ++   L+            V  T EP     A   ++  L 
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAG-LETVTDGEIAIGDRVVNTLEPKDRDIAMVFQNYALY 88

Query: 57 CGVD 60
            + 
Sbjct: 89 PHMT 92


>gi|167401838|ref|ZP_02307326.1| cell division protein FtsY [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167048731|gb|EDR60139.1| cell division protein FtsY [Yersinia pestis biovar Antiqua str.
           UG05-0454]
          Length = 562

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 365 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 420

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 421 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 466


>gi|167420847|ref|ZP_02312600.1| cell division protein FtsY [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|166960976|gb|EDR56997.1| cell division protein FtsY [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|320013587|gb|ADV97158.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 550

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 353 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 408

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 409 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 454


>gi|166364870|ref|YP_001657143.1| hypothetical protein MAE_21290 [Microcystis aeruginosa NIES-843]
 gi|166087243|dbj|BAG01951.1| hypothetical protein MAE_21290 [Microcystis aeruginosa NIES-843]
          Length = 1214

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT ++ L+ + Q+ N+  H+    G    A     ++   G   +    +A  
Sbjct: 453 GMGGTGKTTLLNYLREWWQKTNWATHIFYF-GYDRKAWTLEQIVHEIGQGIYNRFEQASF 511

Query: 71  FAAARLDHVENVIRPALMEGKILLCD 96
            A      V+ + +    E  IL+ D
Sbjct: 512 QAMNLKARVKKLEQKLRSEAYILILD 537


>gi|165926241|ref|ZP_02222073.1| cell division protein FtsY [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165921765|gb|EDR38962.1| cell division protein FtsY [Yersinia pestis biovar Orientalis str.
           F1991016]
          Length = 568

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 371 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 426

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 427 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 472


>gi|163795244|ref|ZP_02189212.1| arginine/ornithine transport system ATPase [alpha proteobacterium
           BAL199]
 gi|159179642|gb|EDP64171.1| arginine/ornithine transport system ATPase [alpha proteobacterium
           BAL199]
          Length = 345

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
           I+  G+ G GK+T I  L  +L  +   V  +  +P    +  + 
Sbjct: 71  IT--GVPGVGKSTFIEALGTYLTGQGRKVAVLAVDPTSGRSGGSI 113


>gi|156936373|ref|YP_001440289.1| cell division protein FtsY [Cronobacter sakazakii ATCC BAA-894]
 gi|156534627|gb|ABU79453.1| hypothetical protein ESA_04273 [Cronobacter sakazakii ATCC BAA-894]
          Length = 517

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  +++   V +    G T  A A   + +    +     A+   
Sbjct: 320 GVNGVGKTTTIGKLARQFEQQGKSVMLAA--GDTFRAAAVEQLQVWGQRNNIPVIAQH-- 375

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I+ A   G  +L+ D
Sbjct: 376 TGADSASVIFDAIQAAKARGVDVLIAD 402


>gi|149911671|ref|ZP_01900280.1| ABC-type multidrug transport system, ATPase and permease component
           [Moritella sp. PE36]
 gi|149805252|gb|EDM65268.1| ABC-type multidrug transport system, ATPase and permease component
           [Moritella sp. PE36]
          Length = 595

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G  I+  G  GAGKTT   LL+RF   +  +V  
Sbjct: 377 KGKVIALVGPSGAGKTTLFELLQRFYDPQRGEVLF 411


>gi|145600681|ref|YP_001164757.1| cell division protein [Yersinia pestis Pestoides F]
 gi|153997129|ref|ZP_02022262.1| cell division protein [Yersinia pestis CA88-4125]
 gi|145212377|gb|ABP41784.1| signal recognition particle-docking protein FtsY [Yersinia pestis
           Pestoides F]
 gi|149289435|gb|EDM39513.1| cell division protein [Yersinia pestis CA88-4125]
          Length = 559

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 362 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 417

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 418 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 463


>gi|119960504|ref|YP_948184.1| signal recognition particle protein [Arthrobacter aurescens TC1]
 gi|119947363|gb|ABM06274.1| signal recognition particle protein [Arthrobacter aurescens TC1]
          Length = 526

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++L+ + +
Sbjct: 107 GLQGAGKTTLAGKLSKWLKAQGH 129


>gi|146306893|ref|YP_001187358.1| adenylylsulfate kinase [Pseudomonas mendocina ymp]
 gi|145575094|gb|ABP84626.1| adenylylsulfate kinase [Pseudomonas mendocina ymp]
          Length = 208

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 20/92 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I F G+ G+GK+T  + L+  L R+ +                   +LL       G   
Sbjct: 38  IWFTGLSGSGKSTLANALEAELFRQGFHT-----------------MLLDGDNVRHGLCK 80

Query: 67  EAIVFAAARLD---HVENVIRPALMEGKILLC 95
           +  +  A+R +    V  V +  +  G I + 
Sbjct: 81  DLGMSDASRTENIRRVAEVAKLLIDSGVITIT 112


>gi|108810316|ref|YP_646083.1| cell division protein [Yersinia pestis Nepal516]
 gi|229900489|ref|ZP_04515618.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis Nepal516]
 gi|108773964|gb|ABG16483.1| signal recognition particle-docking protein FtsY [Yersinia pestis
           Nepal516]
 gi|229682508|gb|EEO78595.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis Nepal516]
          Length = 535

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 338 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 393

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 394 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 439


>gi|45442987|ref|NP_994526.1| cell division protein [Yersinia pestis biovar Microtus str. 91001]
 gi|45437854|gb|AAS63403.1| cell division protein [Yersinia pestis biovar Microtus str. 91001]
          Length = 547

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 350 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 405

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 406 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 451


>gi|218930816|ref|YP_002348691.1| cell division protein [Yersinia pestis CO92]
 gi|229837142|ref|ZP_04457307.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis Pestoides A]
 gi|229839502|ref|ZP_04459661.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|115349427|emb|CAL22400.1| cell division protein [Yersinia pestis CO92]
 gi|229695868|gb|EEO85915.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229706085|gb|EEO92094.1| membrane-binding signal recognition particle (SRP) receptor
           [Yersinia pestis Pestoides A]
          Length = 541

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 344 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 399

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 400 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 445


>gi|108806206|ref|YP_650122.1| cell division protein [Yersinia pestis Antiqua]
 gi|165939137|ref|ZP_02227688.1| cell division protein FtsY [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011666|ref|ZP_02232564.1| cell division protein FtsY [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213536|ref|ZP_02239571.1| cell division protein FtsY [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|108778119|gb|ABG12177.1| signal recognition particle-docking protein FtsY [Yersinia pestis
           Antiqua]
 gi|165912910|gb|EDR31536.1| cell division protein FtsY [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165989435|gb|EDR41736.1| cell division protein FtsY [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205209|gb|EDR49689.1| cell division protein FtsY [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|262367473|gb|ACY64030.1| cell division protein [Yersinia pestis D182038]
          Length = 538

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 341 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 396

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 397 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 442


>gi|238798929|ref|ZP_04642394.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          mollaretii ATCC 43969]
 gi|238717239|gb|EEQ09090.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          mollaretii ATCC 43969]
          Length = 583

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|116494646|ref|YP_806380.1| ABC-type multidrug transport system, ATPase and permease component
           [Lactobacillus casei ATCC 334]
 gi|191638144|ref|YP_001987310.1| ABC-type multidrug transport system, ATPase and permease component
           [Lactobacillus casei BL23]
 gi|227535373|ref|ZP_03965422.1| possible xenobiotic-transporting ATPase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|301066203|ref|YP_003788226.1| multidrug ABC transporter ATPase/permease [Lactobacillus casei str.
           Zhang]
 gi|116104796|gb|ABJ69938.1| ABC-type multidrug transport system, ATPase and permease component
           [Lactobacillus casei ATCC 334]
 gi|190712446|emb|CAQ66452.1| ABC-type multidrug transport system, ATPase and permease component
           [Lactobacillus casei BL23]
 gi|227186969|gb|EEI67036.1| possible xenobiotic-transporting ATPase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|300438610|gb|ADK18376.1| ABC-type multidrug transport system, ATPase and permease component
           [Lactobacillus casei str. Zhang]
 gi|327382173|gb|AEA53649.1| ABC transporter protein [Lactobacillus casei LC2W]
 gi|327385371|gb|AEA56845.1| ABC transporter related protein [Lactobacillus casei BD-II]
          Length = 628

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 14/97 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--------TREPGGTPAAEAARHV 53
             G  ++  G  GAGKTT I+LL+RF       + +         RE   +  A   +  
Sbjct: 410 KPGQMVAIVGPTGAGKTTIINLLERFYDISGGSIRLNGTDTRDMKREAVRSHFAMVLQDT 469

Query: 54  LLSCGVDEFG------AEAEAIVFAAARLDHVENVIR 84
            L  G              +  V AAA+  HV+N +R
Sbjct: 470 WLFTGTIWDNLKYGREDATDDEVLAAAKAAHVDNFVR 506


>gi|22124331|ref|NP_667754.1| cell division protein [Yersinia pestis KIM 10]
 gi|162420030|ref|YP_001605168.1| cell division protein [Yersinia pestis Angola]
 gi|167426293|ref|ZP_02318046.1| cell division protein FtsY [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|294505479|ref|YP_003569541.1| cell division membrane protein [Yersinia pestis Z176003]
 gi|21957106|gb|AAM84005.1|AE013642_6 cell division membrane protein [Yersinia pestis KIM 10]
 gi|162352845|gb|ABX86793.1| cell division protein FtsY [Yersinia pestis Angola]
 gi|167054812|gb|EDR64616.1| cell division protein FtsY [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|294355938|gb|ADE66279.1| cell division membrane protein [Yersinia pestis Z176003]
          Length = 553

 Score = 35.4 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 356 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 411

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 412 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 457


>gi|309777775|ref|ZP_07672723.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914459|gb|EFP60251.1| spermidine/putrescine ABC transporter, ATP-binding protein
          [Erysipelotrichaceae bacterium 3_1_53]
          Length = 525

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          F++  G  G GKTT + +L  FL +   +V    E
Sbjct: 34 FVTLLGPSGCGKTTLLRILGGFLSQSEGNVIFDGE 68


>gi|303231832|ref|ZP_07318546.1| excinuclease ABC, A subunit [Veillonella atypica ACS-049-V-Sch6]
 gi|302513510|gb|EFL55538.1| excinuclease ABC, A subunit [Veillonella atypica ACS-049-V-Sch6]
          Length = 950

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           GLF    G+ G+GK+T I       L   L R  + V   +E  G    +   ++
Sbjct: 630 GLFTVVTGVSGSGKSTLINEILYKGLANQLYRSYHKVGAHKEIRGLEHIDKIINI 684


>gi|294783660|ref|ZP_06748984.1| MRP-family nucleotide-binding protein [Fusobacterium sp.
          1_1_41FAA]
 gi|294480538|gb|EFG28315.1| MRP-family nucleotide-binding protein [Fusobacterium sp.
          1_1_41FAA]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G GK+T  +LL + L++K Y V
Sbjct: 27 GVGKSTVTTLLAKELRKKGYSV 48


>gi|294793634|ref|ZP_06758771.1| cytidylate kinase [Veillonella sp. 3_1_44]
 gi|294455204|gb|EFG23576.1| cytidylate kinase [Veillonella sp. 3_1_44]
          Length = 227

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 1  MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          MN+    I+ +G  GAGK++   ++   L+    D
Sbjct: 1  MNTKKIAIAIDGPAGAGKSSISKVVANELEYLYID 35


>gi|294650502|ref|ZP_06727861.1| signal recognition particle-docking protein FtsY [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292823645|gb|EFF82489.1| signal recognition particle-docking protein FtsY [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 371

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 174 GVNGVGKTTTIGKLAKRLQGEGKKVMLAA--GDTFRAAATEQLQIWGERNDIPVVAQG-- 229

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 230 HGADSASVIFDAFESARAKGIDVLIAD 256


>gi|293605605|ref|ZP_06687985.1| SN-glycerol-3-phosphate ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815985|gb|EFF75086.1| SN-glycerol-3-phosphate ABC superfamily ATP binding cassette
           transporter, ABC protein [Achromobacter piechaudii ATCC
           43553]
          Length = 362

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 6/72 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLK--RFLQRKNY----DVHVTREPGGTPAAEAARHVLLSC 57
           G FI   G  G GK+T + ++     +   +      V  T EP     A   ++  L  
Sbjct: 30  GEFIVIVGPSGCGKSTLMRMVAGLETVTSGDIVIDDKVVNTLEPAERDIAMVFQNYALYP 89

Query: 58  GVDEFGAEAEAI 69
            +  F   A  +
Sbjct: 90  HMTVFENMAYGL 101


>gi|293606362|ref|ZP_06688722.1| polyphosphate kinase 2 [Achromobacter piechaudii ATCC 43553]
 gi|292815222|gb|EFF74343.1| polyphosphate kinase 2 [Achromobacter piechaudii ATCC 43553]
          Length = 453

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 42/129 (32%), Gaps = 41/129 (31%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I  +   L  +   V    +P  T   +                  
Sbjct: 244 ILFEGRDAAGKGGTIKRMMEHLNPRGARVVALEKPSDTEKGQW----------------- 286

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD----SSQHLFLDSLQE 122
               +    + H+          G+I++ DR   S Y   G        +Q  +LD L++
Sbjct: 287 ----YFQRYVQHLPT-------AGEIVMFDR---SWYNRAGVERVMGFCTQQEYLDFLRQ 332

Query: 123 ISVQEVMPD 131
           +      PD
Sbjct: 333 V------PD 335


>gi|290968347|ref|ZP_06559888.1| signal recognition particle-docking protein FtsY [Megasphaera
           genomosp. type_1 str. 28L]
 gi|290781622|gb|EFD94209.1| signal recognition particle-docking protein FtsY [Megasphaera
           genomosp. type_1 str. 28L]
          Length = 313

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           FI   G+ G GKTT I  L  + +++   V V
Sbjct: 105 FIV--GVNGVGKTTTIGKLANYYRQQGKSVLV 134


>gi|296087584|emb|CBI34840.3| unnamed protein product [Vitis vinifera]
          Length = 448

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 18/156 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-EAEAI 69
           G   +GKTT   ++   L  +   V V ++    P ++     +L    D   A   E +
Sbjct: 36  GGTASGKTTVCDMIIAQLHDQ-RVVLVNQDSFYCPLSDGKLEKVLEINFDHPDAFNTELL 94

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-SVQEV 128
           +                L  G+ +    +   ++             +  L+ I  + + 
Sbjct: 95  LACMD-----------KLKNGQAVSIPNYDFKTHKNIEPGRKINASDVIILEGILVLHDP 143

Query: 129 MP-DCT---IILDLPVDIGLKRVQNRYSLRESACLD 160
              D     I +D   D+ L R   R ++     +D
Sbjct: 144 RVRDLMNMKIFVDTDCDVRLARRIQRDTVERGRDID 179


>gi|323342453|ref|ZP_08082685.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463565|gb|EFY08759.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 234

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT 44
          ++SG  I   G  GAGKTT I  +   L+  + D+ V   P G+
Sbjct: 29 LDSGKIIGLCGPNGAGKTTLIKTIVGLLRDYHGDIQVCGYPVGS 72


>gi|256158893|ref|ZP_05456743.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella ceti M490/95/1]
 gi|256254267|ref|ZP_05459803.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella ceti B1/94]
 gi|261221420|ref|ZP_05935701.1| sulfate adenylyltransferase [Brucella ceti B1/94]
 gi|265997382|ref|ZP_06109939.1| sulfate adenylyltransferase [Brucella ceti M490/95/1]
 gi|260920004|gb|EEX86657.1| sulfate adenylyltransferase [Brucella ceti B1/94]
 gi|262551850|gb|EEZ07840.1| sulfate adenylyltransferase [Brucella ceti M490/95/1]
          Length = 644

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|254721286|ref|ZP_05183076.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A1055]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|227114855|ref|ZP_03828511.1| putative taurine transport ATP-binding protein [Pectobacterium
          carotovorum subsp. brasiliensis PBR1692]
          Length = 267

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46
           G F+   G  G GK+T ++++  F       V    EP   P 
Sbjct: 40 KGEFVVLLGPSGCGKSTILNMIAGFEAADKGRVLCGDEPVRRPG 83


>gi|255941266|ref|XP_002561402.1| Pc16g10960 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586025|emb|CAP93766.1| Pc16g10960 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 290

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
             ++  GI G+GKTT    +   L   +  V  
Sbjct: 82  FLVAIAGIPGSGKTTLAKAVVERLNEMDGSVCH 114


>gi|170026190|ref|YP_001722695.1| signal recognition particle-docking protein FtsY [Yersinia
           pseudotuberculosis YPIII]
 gi|169752724|gb|ACA70242.1| signal recognition particle-docking protein FtsY [Yersinia
           pseudotuberculosis YPIII]
          Length = 523

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 326 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 381

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 382 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 427


>gi|171464208|ref|YP_001798321.1| signal recognition particle-docking protein FtsY [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193746|gb|ACB44707.1| signal recognition particle-docking protein FtsY [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 296

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  L R  Q +   V +    G T  A A   +    G ++     +   
Sbjct: 99  GVNGAGKTTTIGKLCRLFQSQGKSVLLAA--GDTFRAAARNQLQEWGGRNQVDVITQEGG 156

Query: 71  FAAARLDHVENVIRPAL-MEGKILLCD 96
            AAA      + I  A+  +  IL+ D
Sbjct: 157 DAAAVA---HDAIHAAISRKNDILIID 180


>gi|157369571|ref|YP_001477560.1| ABC transporter-like protein [Serratia proteamaculans 568]
 gi|157321335|gb|ABV40432.1| ABC transporter-related protein [Serratia proteamaculans 568]
          Length = 576

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 39 GPDGAGKTTLLRMLAGLLK 57


>gi|156354436|ref|XP_001623400.1| predicted protein [Nematostella vectensis]
 gi|156210095|gb|EDO31300.1| predicted protein [Nematostella vectensis]
          Length = 901

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 131 DCTIILDLPVDIGLKRVQNR 150
           D  I+ DLP ++ L R + R
Sbjct: 835 DLVILFDLPDEVALMRAEGR 854


>gi|145602864|ref|XP_001404126.1| hypothetical protein MGG_13762 [Magnaporthe oryzae 70-15]
 gi|145011230|gb|EDJ95886.1| hypothetical protein MGG_13762 [Magnaporthe oryzae 70-15]
          Length = 1213

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVL 54
           +G   +  G  G+GK+T + +L+R+ +     V   + R P     +   + VL
Sbjct: 273 AGKVTAIVGPSGSGKSTIVGILERWYEFNGDPVLNPLVRNPNPQAFSANKKQVL 326


>gi|126658402|ref|ZP_01729551.1| adenylylsulfate kinase [Cyanothece sp. CCY0110]
 gi|126620334|gb|EAZ91054.1| adenylylsulfate kinase [Cyanothece sp. CCY0110]
          Length = 181

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNY 33
          F G+ GAGKTT    L++ L+   Y
Sbjct: 10 FTGLSGAGKTTITRALEQKLRDAGY 34


>gi|229541805|ref|ZP_04430865.1| glycine betaine/L-proline ABC transporter, ATPase subunit
          [Bacillus coagulans 36D1]
 gi|229326225|gb|EEN91900.1| glycine betaine/L-proline ABC transporter, ATPase subunit
          [Bacillus coagulans 36D1]
          Length = 381

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          SG FI F G  G GKTT + ++ R ++
Sbjct: 27 SGRFIVFIGPSGCGKTTTMKMINRLIE 53


>gi|229543563|ref|ZP_04432623.1| dephospho-CoA kinase [Bacillus coagulans 36D1]
 gi|229327983|gb|EEN93658.1| dephospho-CoA kinase [Bacillus coagulans 36D1]
          Length = 200

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 68/227 (29%), Gaps = 53/227 (23%)

Query: 5   LFISFEGIEGAGKTTHISLLKRF---LQRKNYDVHVTREPG---GTPAAEAARHVLLSCG 58
             I   G   +GK+T  ++LK     +   +       EPG        EA    +L   
Sbjct: 3   KIIGLTGGIASGKSTVSNMLKTKGFTIVDADIAARKVVEPGELAYEQIIEAFGEGILLQD 62

Query: 59  VDEFGAEAEAIVFA--------------AARLDHVENVIRPALMEGKILLCDRFLDSSYA 104
           +     +  A++FA              A R        R      K +  D        
Sbjct: 63  LTLDRKKLGALIFADEALRMKLNSIVHPAVRAWMTREKDRAIENGKKTVFLD-------- 114

Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164
                     LF   L  +       + TI++ +  +  LKR+  R  L E        R
Sbjct: 115 -------IPLLFESRLTYMV------ERTILVYVDEETQLKRLMTRNGLSEKEAQMRI-R 160

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
             + + EK       +A        ++D+  S +     +  IV + 
Sbjct: 161 AQMPLSEK-----KALADA------VLDNNGSLEETKQQLEKIVSDW 196


>gi|119962249|ref|YP_946365.1| ferric enterobactin transport ATP-binding protein [Arthrobacter
           aurescens TC1]
 gi|119949108|gb|ABM08019.1| ferric enterobactin transport ATP-binding protein [Arthrobacter
           aurescens TC1]
          Length = 273

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGVDE 61
           G F    G    GK+T +  L R ++ K+  V +  +     PA E AR + LL      
Sbjct: 35  GQFTVIVGPNACGKSTLLRALARLIKPKSGQVLLDGKSVTSLPAKELARRLGLLPQSSIA 94

Query: 62  FGAEAEAIVFAAARLDHVE 80
                 A + A  R  H +
Sbjct: 95  PDGITVADLVARGRYPHQK 113


>gi|119477700|ref|ZP_01617850.1| adenylylsulfate kinase [marine gamma proteobacterium HTCC2143]
 gi|119449203|gb|EAW30443.1| adenylylsulfate kinase [marine gamma proteobacterium HTCC2143]
          Length = 205

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 32/141 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L++ L  K       R               L       G     
Sbjct: 34  FTGLSGSGKSTVAVALEQALTAKGK--LTYR---------------LDGDNIRLGINKNL 76

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              A  R +++     + +  +  G I L      S Y        +    +  L + + 
Sbjct: 77  GFSAEDRTENIRRIGEISKLFVDVGVITLS--SFVSPY-------RADRDLVRELHKQAG 127

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
            +      + +D+P+D+   R
Sbjct: 128 MDF---IEVYVDVPLDVAEDR 145


>gi|108762086|ref|YP_630650.1| ABC transporter ATP-binding protein [Myxococcus xanthus DK 1622]
 gi|108465966|gb|ABF91151.1| ABC transporter, ATP-binding protein [Myxococcus xanthus DK 1622]
          Length = 247

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 17/23 (73%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
          ++G FIS  G  G+GKTT ++L+
Sbjct: 38 HAGEFISIAGPSGSGKTTLLNLI 60


>gi|30261965|ref|NP_844342.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. Ames]
 gi|47527228|ref|YP_018577.1| branched chain amino acid ABC transporter ATP-binding protein
          [Bacillus anthracis str. 'Ames Ancestor']
 gi|49184805|ref|YP_028057.1| branched-chain amino acid ABC transporter ATP-binding protein
          [Bacillus anthracis str. Sterne]
 gi|65319248|ref|ZP_00392207.1| COG0411: ABC-type branched-chain amino acid transport systems,
          ATPase component [Bacillus anthracis str. A2012]
 gi|165870235|ref|ZP_02214891.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0488]
 gi|167632911|ref|ZP_02391237.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0442]
 gi|167638443|ref|ZP_02396720.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0193]
 gi|170686442|ref|ZP_02877663.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0465]
 gi|170706142|ref|ZP_02896604.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0389]
 gi|177650901|ref|ZP_02933798.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0174]
 gi|190566248|ref|ZP_03019166.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis Tsiankovskii-I]
 gi|196036755|ref|ZP_03104146.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus W]
 gi|227815247|ref|YP_002815256.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. CDC 684]
 gi|228914554|ref|ZP_04078163.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228945577|ref|ZP_04107927.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229121513|ref|ZP_04250740.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus 95/8201]
 gi|229604517|ref|YP_002866336.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0248]
 gi|254684528|ref|ZP_05148388.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. CNEVA-9066]
 gi|254734831|ref|ZP_05192543.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. Western North America USA6153]
 gi|254741232|ref|ZP_05198920.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. Kruger B]
 gi|254755486|ref|ZP_05207520.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. Vollum]
 gi|254760022|ref|ZP_05212046.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. Australia 94]
 gi|30256591|gb|AAP25828.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. Ames]
 gi|47502376|gb|AAT31052.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178732|gb|AAT54108.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. Sterne]
 gi|164714123|gb|EDR19644.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0488]
 gi|167513744|gb|EDR89113.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0193]
 gi|167531723|gb|EDR94388.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0442]
 gi|170129144|gb|EDS98009.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0389]
 gi|170669518|gb|EDT20260.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0465]
 gi|172083362|gb|EDT68423.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0174]
 gi|190562383|gb|EDV16350.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis Tsiankovskii-I]
 gi|195990638|gb|EDX54615.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus W]
 gi|227007834|gb|ACP17577.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. CDC 684]
 gi|228661977|gb|EEL17590.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus 95/8201]
 gi|228814095|gb|EEM60366.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228844873|gb|EEM89915.1| Branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229268925|gb|ACQ50562.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus anthracis str. A0248]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|329920803|ref|ZP_08277390.1| hypothetical protein HMPREF9210_0323 [Lactobacillus iners SPIN
          1401G]
 gi|328935583|gb|EGG32050.1| hypothetical protein HMPREF9210_0323 [Lactobacillus iners SPIN
          1401G]
          Length = 123

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M     I   G  GAGKTT  + L+          H TR P
Sbjct: 1  MKK--IIIIAGPSGAGKTTISNYLQEKYNIPRVLTHTTRPP 39


>gi|331267138|ref|YP_004326768.1| phosphoribulokinase / uridine kinase family protein [Streptococcus
           oralis Uo5]
 gi|326683810|emb|CBZ01428.1| phosphoribulokinase / uridine kinase family protein [Streptococcus
           oralis Uo5]
          Length = 208

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 22/173 (12%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK+T    L + L  +  ++  T      P   + RH++          +  A +  A 
Sbjct: 30  SGKSTFAKELFQALDSEKVNLLET-----DPYITSERHLV--VPKQAPDQKVTACLPVAH 82

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP---- 130
            L  ++  I  AL  G  +L    +D  +        ++ + +  ++ +SV   +P    
Sbjct: 83  ELASLQRDIL-ALQAGMDVLT---IDEPWKASEVLSGAKPILI--VEGMSV-GFLPKELF 135

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           D TI      +  LKR   R +   +    +     +  H+ RR+ +L   R 
Sbjct: 136 DKTICFYTDEETELKRRLARDTTMRNRDASFV----LASHQMRREQYLRYYRE 184


>gi|319779719|ref|YP_004130632.1| Maltose/maltodextrin transport ATP-binding protein MalK
          [Taylorella equigenitalis MCE9]
 gi|317109743|gb|ADU92489.1| Maltose/maltodextrin transport ATP-binding protein MalK
          [Taylorella equigenitalis MCE9]
          Length = 323

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G FI+  G  G GKTT + ++ 
Sbjct: 28 KGEFIALLGPSGCGKTTLLRMIA 50


>gi|315917031|ref|ZP_07913271.1| cell division protein ftsY [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313690906|gb|EFS27741.1| cell division protein ftsY [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 337

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            I   G+ G GKTT I  +   L+++   V +
Sbjct: 140 LIV--GVNGVGKTTTIGKIAAKLKKEGKKVVL 169


>gi|308186442|ref|YP_003930573.1| ATP-binding component of spermidine/putrescine transport [Pantoea
          vagans C9-1]
 gi|308056952|gb|ADO09124.1| ATP-binding component of spermidine/putrescine transport [Pantoea
          vagans C9-1]
          Length = 406

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G FI+  G  G GKTT + L+ 
Sbjct: 68 IHHGEFITLLGPSGCGKTTILRLIA 92


>gi|300313432|ref|YP_003777524.1| signal recognition particle GTPase involved in cell division
           protein [Herbaspirillum seropedicae SmR1]
 gi|300076217|gb|ADJ65616.1| signal recognition particle GTPase involved in cell division
           protein [Herbaspirillum seropedicae SmR1]
          Length = 321

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + I+  G+ GAGKTT I  L   LQ     V +
Sbjct: 124 MMIA--GVNGAGKTTTIGKLALHLQAHGQSVLL 154


>gi|284162435|ref|YP_003401058.1| cytidylate kinase [Archaeoglobus profundus DSM 5631]
 gi|284012432|gb|ADB58385.1| cytidylate kinase [Archaeoglobus profundus DSM 5631]
          Length = 185

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 44/213 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G+ G+G TT   LL   L    + +          A E  R +             
Sbjct: 3   ITISGLPGSGTTTVAKLLAERL---GWKLI--------SAGEVFRRL------------- 38

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
                A  R   +E   R A     I   D ++D     +        +    L    ++
Sbjct: 39  -----AMERGMSLEEFSRYAEENPDI---DIYID-RMQRELAEKEENVVVEGRLSGWMIK 89

Query: 127 E-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLDIARNQ 184
           +       + +    +I  +R+  R  +  S      E K     EKRR + F  I  + 
Sbjct: 90  DAFK----VWIYADPEIRYERIAKREGIELSRA--RVETKRREELEKRRYKKFYSIDIDD 143

Query: 185 PDRCHI-VDSAH-SFQSVATNILNIVWELVQKR 215
               HI ++S     + +   IL   +ELV++R
Sbjct: 144 ISVYHIAINSGLFKPEEIVEIILKA-FELVRRR 175


>gi|283481550|emb|CAZ69666.1| putative membrane protein [Emiliania huxleyi virus 99B1]
          Length = 192

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            +PD TI L  P +  L+R         ++  D FE++           +L+   + P+R
Sbjct: 98  PVPDRTITLRTPPE--LRR--QDSMTTHTSEHDRFEKEK----------YLETMNHDPER 143

Query: 188 C 188
            
Sbjct: 144 Y 144


>gi|257868636|ref|ZP_05648289.1| ABC transporter [Enterococcus gallinarum EG2]
 gi|257802800|gb|EEV31622.1| ABC transporter [Enterococcus gallinarum EG2]
          Length = 594

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           ++  G  GAGKTT I+LL RF       + + R      +A   R 
Sbjct: 385 VAIVGPTGAGKTTLINLLMRFYPLNGGKIRIDRYNMTDFSATDIRK 430


>gi|257465874|ref|ZP_05630185.1| Signal recognition particle receptor FtsY [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 334

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            I   G+ G GKTT I  +   L+++   V +
Sbjct: 137 LIV--GVNGVGKTTTIGKIAAKLKKEGKKVVL 166


>gi|229828904|ref|ZP_04454973.1| hypothetical protein GCWU000342_00989 [Shuttleworthia satelles
          DSM 14600]
 gi|229792067|gb|EEP28181.1| hypothetical protein GCWU000342_00989 [Shuttleworthia satelles
          DSM 14600]
          Length = 292

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F++  G  G GKTT I ++ R L+
Sbjct: 67 GEFVTILGSSGCGKTTLIKMVNRLLE 92


>gi|258654176|ref|YP_003203332.1| cytidylate kinase [Nakamurella multipartita DSM 44233]
 gi|258557401|gb|ACV80343.1| cytidylate kinase [Nakamurella multipartita DSM 44233]
          Length = 237

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
          M+S   I+ +G  G GK+T    + + L     D
Sbjct: 1  MSSSFVIAIDGPAGTGKSTVARRVAQALHAGYLD 34


>gi|269860900|ref|XP_002650167.1| ATP-dependent permease [Enterocytozoon bieneusi H348]
 gi|220066390|gb|EED43873.1| ATP-dependent permease [Enterocytozoon bieneusi H348]
          Length = 595

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRK 31
          + SG+ I+  G  GAGKTT ++ L   L   
Sbjct: 42 IKSGMMIALMGSSGAGKTTLMNSLTGRLPSN 72


>gi|218659341|ref|ZP_03515271.1| glycerol-3-phosphate transporter ATP-binding subunit [Rhizobium
          etli IE4771]
          Length = 124

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG F+   G  G GK+T + ++ 
Sbjct: 18 IKSGEFVVILGPSGCGKSTLLRMIA 42


>gi|209968067|ref|YP_002296242.1| putative membrane protein [Emiliania huxleyi virus 86]
          Length = 143

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            +PD TI L  P +  L+R         ++  D FE++           +L+   + P+R
Sbjct: 49  PVPDRTITLRTPPE--LRR--QDSMTTHTSEHDRFEKEK----------YLETMNHDPER 94

Query: 188 C 188
            
Sbjct: 95  Y 95


>gi|186893578|ref|YP_001870690.1| signal recognition particle-docking protein FtsY [Yersinia
           pseudotuberculosis PB1/+]
 gi|186696604|gb|ACC87233.1| signal recognition particle-docking protein FtsY [Yersinia
           pseudotuberculosis PB1/+]
          Length = 550

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 353 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 408

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 409 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 454


>gi|167468719|ref|ZP_02333423.1| glycine betaine/L-proline transport ATP-binding protein [Yersinia
           pestis FV-1]
          Length = 399

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           MN G      G+ G+GK+T + LL R ++    +V +  E     +  A R V
Sbjct: 51  MNEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEVLIDGEDIAKISDSALRTV 103


>gi|160883469|ref|ZP_02064472.1| hypothetical protein BACOVA_01438 [Bacteroides ovatus ATCC 8483]
 gi|156111189|gb|EDO12934.1| hypothetical protein BACOVA_01438 [Bacteroides ovatus ATCC 8483]
          Length = 188

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 39/219 (17%)

Query: 3   SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           +G  I F    G+GK+T I+ LL + L         +R P GT         L      +
Sbjct: 2   TGKLIIFSAPSGSGKSTIINYLLTQNLNLAFSISATSRPPRGTEQHGVEYFFLTPEEFRQ 61

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLD 118
                E + +        E V +           DR+  +  A    Q E   +    +D
Sbjct: 62  RIENNEFLEY--------EEVYK-----------DRYYGTLKAQVEKQLEAGQNVVFDVD 102

Query: 119 SLQEISVQEVMPD--CTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175
            +   ++++   D   ++ +  P V+    R++ R +           + +         
Sbjct: 103 VVGGCNIKKFYGDRALSVFIQPPSVEELRCRLEGRGTDAPEVIESRIAKAEYE------- 155

Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214
             L  A      C IV+   + ++     L ++ E +++
Sbjct: 156 --LSFASQFD--CVIVN--DNLETAKAEALKVIKEFLEQ 188


>gi|154249544|ref|YP_001410369.1| ABC transporter related [Fervidobacterium nodosum Rt17-B1]
 gi|154153480|gb|ABS60712.1| ABC transporter related [Fervidobacterium nodosum Rt17-B1]
          Length = 251

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
            G F+   G  GAGK+T I  L   +  K   V 
Sbjct: 29 KKGDFVGIIGPNGAGKSTLIKALIGLIPYKGRVVI 63


>gi|154290868|ref|XP_001546023.1| hypothetical protein BC1G_15366 [Botryotinia fuckeliana B05.10]
 gi|150847185|gb|EDN22378.1| hypothetical protein BC1G_15366 [Botryotinia fuckeliana B05.10]
          Length = 311

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 2   NSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
             G    I F G++GAGKTT  + L R+ Q + +   + 
Sbjct: 97  KKGKANIIMFVGLQGAGKTTTCTKLARWYQSRGFKACLV 135


>gi|148229199|ref|NP_001086814.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Xenopus laevis]
 gi|50418353|gb|AAH77492.1| Papss1-prov protein [Xenopus laevis]
          Length = 425

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 7/57 (12%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
           G+ GAGKTT    L+ +L            P  T   +  RH L            E
Sbjct: 59  GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRHGLSKNLGFSQEDREE 108


>gi|73852809|ref|YP_294093.1| hypothetical protein EhV335 [Emiliania huxleyi virus 86]
 gi|72415525|emb|CAI65762.1| putative membrane protein [Emiliania huxleyi virus 86]
          Length = 192

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187
            +PD TI L  P +  L+R         ++  D FE++           +L+   + P+R
Sbjct: 98  PVPDRTITLRTPPE--LRR--QDSMTTHTSEHDRFEKEK----------YLETMNHDPER 143

Query: 188 C 188
            
Sbjct: 144 Y 144


>gi|62290123|ref|YP_221916.1| adenylate kinase [Brucella abortus bv. 1 str. 9-941]
 gi|82700046|ref|YP_414620.1| adenylate kinase [Brucella melitensis biovar Abortus 2308]
 gi|189024361|ref|YP_001935129.1| Adenylate kinase, subfamily [Brucella abortus S19]
 gi|225852709|ref|YP_002732942.1| adenylate kinase [Brucella melitensis ATCC 23457]
 gi|237815631|ref|ZP_04594628.1| adenylate kinase [Brucella abortus str. 2308 A]
 gi|254689432|ref|ZP_05152686.1| adenylate kinase [Brucella abortus bv. 6 str. 870]
 gi|254693917|ref|ZP_05155745.1| adenylate kinase [Brucella abortus bv. 3 str. Tulya]
 gi|254697567|ref|ZP_05159395.1| adenylate kinase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730461|ref|ZP_05189039.1| adenylate kinase [Brucella abortus bv. 4 str. 292]
 gi|256113766|ref|ZP_05454570.1| adenylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|256257678|ref|ZP_05463214.1| adenylate kinase [Brucella abortus bv. 9 str. C68]
 gi|256263801|ref|ZP_05466333.1| adenylate kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|260546671|ref|ZP_05822410.1| adenylate kinase [Brucella abortus NCTC 8038]
 gi|260754955|ref|ZP_05867303.1| adenylate kinase [Brucella abortus bv. 6 str. 870]
 gi|260758171|ref|ZP_05870519.1| adenylate kinase [Brucella abortus bv. 4 str. 292]
 gi|260761997|ref|ZP_05874340.1| adenylate kinase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883964|ref|ZP_05895578.1| adenylate kinase [Brucella abortus bv. 9 str. C68]
 gi|261214209|ref|ZP_05928490.1| adenylate kinase [Brucella abortus bv. 3 str. Tulya]
 gi|265995126|ref|ZP_06107683.1| adenylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|297248518|ref|ZP_06932236.1| adenylate kinase [Brucella abortus bv. 5 str. B3196]
 gi|81309410|sp|Q57CS9|KAD_BRUAB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|123547525|sp|Q2YRT7|KAD_BRUA2 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|238689382|sp|B2S658|KAD_BRUA1 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|254806975|sp|C0RJI0|KAD_BRUMB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|62196255|gb|AAX74555.1| Adk, adenylate kinase [Brucella abortus bv. 1 str. 9-941]
 gi|82616147|emb|CAJ11190.1| Shikimate kinase:Adenylate kinase:Adenylate kinase, subfamily
           [Brucella melitensis biovar Abortus 2308]
 gi|189019933|gb|ACD72655.1| Adenylate kinase, subfamily [Brucella abortus S19]
 gi|225641074|gb|ACO00988.1| adenylate kinase [Brucella melitensis ATCC 23457]
 gi|237788929|gb|EEP63140.1| adenylate kinase [Brucella abortus str. 2308 A]
 gi|260095721|gb|EEW79598.1| adenylate kinase [Brucella abortus NCTC 8038]
 gi|260668489|gb|EEX55429.1| adenylate kinase [Brucella abortus bv. 4 str. 292]
 gi|260672429|gb|EEX59250.1| adenylate kinase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675063|gb|EEX61884.1| adenylate kinase [Brucella abortus bv. 6 str. 870]
 gi|260873492|gb|EEX80561.1| adenylate kinase [Brucella abortus bv. 9 str. C68]
 gi|260915816|gb|EEX82677.1| adenylate kinase [Brucella abortus bv. 3 str. Tulya]
 gi|262766239|gb|EEZ12028.1| adenylate kinase [Brucella melitensis bv. 3 str. Ether]
 gi|263093929|gb|EEZ17863.1| adenylate kinase [Brucella melitensis bv. 2 str. 63/9]
 gi|297175687|gb|EFH35034.1| adenylate kinase [Brucella abortus bv. 5 str. B3196]
 gi|326409234|gb|ADZ66299.1| Adenylate kinase, subfamily [Brucella melitensis M28]
 gi|326538942|gb|ADZ87157.1| adenylate kinase [Brucella melitensis M5-90]
          Length = 194

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 53/218 (24%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK T   LL    ++       T         +  R  +      E G  A+A++
Sbjct: 7   GPPGAGKGTQAGLLT---KKHGIPQLST--------GDMLRAAV--AQQSEIGKRAKAVM 53

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFLDSLQEISV 125
                   V + I         ++ +R +D+      +   G   +       +L ++  
Sbjct: 54  ---DAGQLVSDEIVNQ------IVSER-IDAPDCANGFILDGYPRTVPQA--QALSQMLS 101

Query: 126 Q-EVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEKR--- 173
              +  D  I L +  +  +KR+++R          +R     + F ++ V   EK    
Sbjct: 102 GKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPL 161

Query: 174 ---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
                   ++         I++     + V   I  I+
Sbjct: 162 SSYYAGTGEL--------RIINGMAPVEEVTAEIERIL 191


>gi|51594576|ref|YP_068767.1| cell division protein [Yersinia pseudotuberculosis IP 32953]
 gi|51587858|emb|CAH19461.1| cell division protein [Yersinia pseudotuberculosis IP 32953]
          Length = 574

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    ++    A+   
Sbjct: 377 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNKIAVVAQH-- 432

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + I+ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 433 TGADSASVIFDAIQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 478


>gi|16265034|ref|NP_437826.1| putative sugar uptake ABC transporter ATP-binding protein
          [Sinorhizobium meliloti 1021]
 gi|307321362|ref|ZP_07600761.1| ABC transporter related protein [Sinorhizobium meliloti AK83]
 gi|15141173|emb|CAC49686.1| putative sugar uptake ABC transporter ATP-binding protein
          [Sinorhizobium meliloti 1021]
 gi|306893007|gb|EFN23794.1| ABC transporter related protein [Sinorhizobium meliloti AK83]
          Length = 370

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F+ F G  G GK+T + L+   +     DV +
Sbjct: 29 GEFVVFVGPSGCGKSTLLRLIAGLVPVSGGDVFI 62


>gi|148264015|ref|YP_001230721.1| GTPase-like protein [Geobacter uraniireducens Rf4]
 gi|146397515|gb|ABQ26148.1| GTPase-like protein [Geobacter uraniireducens Rf4]
          Length = 444

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 52/173 (30%), Gaps = 41/173 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GK+     +   L+ K     V R P   P  + A+  +     + F    +  ++  
Sbjct: 131 GCGKSQISRYIAAVLRGKGITPVVVRHP--MPYGDLAKQAV-----ERFSHFEDLSLYHC 183

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----QGERDSSQHLFLDSLQEISVQEV 128
              +       P L +G ++       +   Y       E +    ++     +      
Sbjct: 184 TIEE--REEYEPLLRQGTVV------YAGIDYERILLAAEGEGDVIIWDGGNNDF--PFF 233

Query: 129 MPDCTI-------------ILDLPVDIGLKRVQ----NRYSLRESACLDYFER 164
            PD  I                 P ++ L+R      N+ +  ++  +   E+
Sbjct: 234 RPDLEITVADPLRSGDETAYF--PGEVNLRRAAVVIVNKINAVDAETVRRLEK 284


>gi|86134051|ref|ZP_01052633.1| polyphosphate kinase 2 [Polaribacter sp. MED152]
 gi|85820914|gb|EAQ42061.1| polyphosphate kinase 2 [Polaribacter sp. MED152]
          Length = 284

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 75/238 (31%), Gaps = 38/238 (15%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  I  +G++ +GK + I  + + +  +  +VH  + P      +  +H  L        
Sbjct: 51  GFLICLQGMDTSGKDSLIREVFKDVNARGVEVHSFKVPTE----QELKHDFLWRHYIALP 106

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR----FLDSS-----YAYQGERDSSQH 114
            + +  VF      H EN           +L  R    ++ S       +     D    
Sbjct: 107 EKGKIGVFN---RTHYEN-----------VLVTRVHPEYIFSENIPSVSSIDDLDDDFYL 152

Query: 115 LFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKD 166
             +  + +                 L+L  D    R+  R +L E        D  ERK 
Sbjct: 153 DRMHRINQFENHLVKNGTK-VLKFFLNLSKDEQKNRLLRRLNLPEKNWKFSPSDLKERKL 211

Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQS--VATNILNIVWELVQKRVSPLSSK 222
              ++   +  L+    +     ++ +     +  +   IL    E    +   LSSK
Sbjct: 212 WDEYQTCYEAVLNNTSKEEAPWFVIPADDKPTARLIFAEILLKEMEKCNFKAPKLSSK 269


>gi|120556651|ref|YP_961002.1| signal recognition particle-docking protein FtsY [Marinobacter
           aquaeolei VT8]
 gi|120326500|gb|ABM20815.1| signal recognition particle-docking protein FtsY [Marinobacter
           aquaeolei VT8]
          Length = 405

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L +  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 210 GVNGVGKTTTIGKLTKKFQSEGKSVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 265

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + + I+ A   G  +++ D
Sbjct: 266 TGADSASVIFDAIQSAQSRGVDVVIAD 292


>gi|57167841|ref|ZP_00366981.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter coli RM2228]
 gi|57020963|gb|EAL57627.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Campylobacter coli RM2228]
          Length = 164

 Score = 35.4 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39
          M   + I+F G   +GKTT I+ +     ++N  V + +
Sbjct: 1  MKKSI-IAFSGPSNSGKTTLITKIANEFIKQNLKVLIIK 38


>gi|329769272|ref|ZP_08260689.1| hypothetical protein HMPREF0433_00453 [Gemella sanguinis M325]
 gi|328839266|gb|EGF88849.1| hypothetical protein HMPREF0433_00453 [Gemella sanguinis M325]
          Length = 537

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38
             G  I   G  G GK+T   L+ +F+  +  D  +T
Sbjct: 350 KKGEIIGISGPSGCGKSTIAKLIMKFISDEGMDGRIT 386


>gi|328952099|ref|YP_004369433.1| Monosaccharide-transporting ATPase [Desulfobacca acetoxidans DSM
          11109]
 gi|328452423|gb|AEB08252.1| Monosaccharide-transporting ATPase [Desulfobacca acetoxidans DSM
          11109]
          Length = 581

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G +GAGK++ I +L   L+    +  V
Sbjct: 40 GPDGAGKSSLIQMLAGVLRPSGGEAIV 66


>gi|330820128|ref|YP_004348990.1| ferric enterobactin transport ATP-binding protein FepC
           [Burkholderia gladioli BSR3]
 gi|327372123|gb|AEA63478.1| ferric enterobactin transport ATP-binding protein FepC
           [Burkholderia gladioli BSR3]
          Length = 283

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGVDEFG 63
           F +  G  G GK+T +  L R L  +   V +  RE  G      AR V  L        
Sbjct: 45  FTTIVGPNGCGKSTLLKALSRVLSPQGGAVLLDGREAAGYAPKAYARQVGFLPQSSTAPE 104

Query: 64  AEAEAIVFAAARLDH 78
               A + A  R  H
Sbjct: 105 GITVAELVARGRYPH 119


>gi|327349483|gb|EGE78340.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 1002

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 11/63 (17%)

Query: 8   SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67
              G  G+GK+T ISLL + L    +++   + P G+  +        S G    GA+ E
Sbjct: 356 VLRGPAGSGKSTTISLLSKAL---GFEIVEWKNPLGSEYS--------SQGYVSMGAQFE 404

Query: 68  AIV 70
             +
Sbjct: 405 DFL 407


>gi|326488239|dbj|BAJ93788.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326498721|dbj|BAK02346.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 267

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64
          G  G+GK+T+ S L +  +     +H+       E    P +   R ++ L   ++E G 
Sbjct: 9  GPAGSGKSTYCSGLYQHCETVGRRIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68

Query: 65 EAEAIVFAAARLDHVENVIRPALME 89
               +     ++H+E+ +   L E
Sbjct: 69 GPNGGLIYC--MEHLEDNLDDWLDE 91


>gi|323350961|ref|ZP_08086619.1| adenylate kinase [Streptococcus sanguinis VMC66]
 gi|322122943|gb|EFX94649.1| adenylate kinase [Streptococcus sanguinis VMC66]
          Length = 212

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 66/236 (27%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK T  + +       +               +  R  +      E G  A++ +
Sbjct: 7   GLPGAGKGTQAAKIVEHFNVAHI-----------STGDMFRAAI--ANQTEMGVLAKSYI 53

Query: 71  FAAARLDHVEN-----VIRPALMEGKI----LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121
               + + V +     +++  L +  I     L D +  +    Q          LD   
Sbjct: 54  ---DKGELVPDQVTNGIVKERLSQDDIKQTGFLLDGYPRTIE--QANALDQTLAELD--- 105

Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA--------------CLDYFERKDV 167
            +++        I +++  +  L+R+  R   RE+                 DY++R+D 
Sbjct: 106 -LALDG-----VINIEVDPNSLLERLSGRIIHRETGETFHKVFNPPADYKEEDYYQREDD 159

Query: 168 MIHEKRRQIFLDIARNQPDRCHIVD------------SAHSFQSVATNILNIVWEL 211
                +R++ ++IA+ QP    I+D                   V + I  ++  L
Sbjct: 160 KPETVKRRLDVNIAQGQP----IIDHYRSKGLVHDIQGNQDINDVFSAIEKVLTNL 211


>gi|298294222|ref|YP_003696161.1| ABC transporter [Starkeya novella DSM 506]
 gi|296930733|gb|ADH91542.1| ABC transporter related protein [Starkeya novella DSM 506]
          Length = 262

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 20/46 (43%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
          G FI   G  G GK+T + ++    +     +    EP   P+AE 
Sbjct: 36 GEFIVLLGPSGCGKSTLLYMIAGLEEVSGGRIACDGEPVTEPSAER 81


>gi|260431811|ref|ZP_05785782.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415639|gb|EEX08898.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 212

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 18/154 (11%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGA 64
            ++  G  GAGK+T  +L +R LQ +     +    G     +    + LL         
Sbjct: 30  LVAVAGPPGAGKSTVAALAQRALQGRGIPAGLLSMDGFHYDNQILTALGLLPRKGAPETF 89

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
           +         RL   + V  P          DR LD S A        Q + +     + 
Sbjct: 90  DLPGFHAMLRRLQVEDEVAVPEF--------DRVLDKSIAACSFVTRDQRVVIVEGNYLL 141

Query: 125 VQ-----EVMPD---CTIILDLPVDIGLKRVQNR 150
           +      ++  D    T+ L++P+     R+ +R
Sbjct: 142 LDEPGWCDLR-DLWALTVFLNVPLPTLEARLLDR 174


>gi|302553563|ref|ZP_07305905.1| adenylate kinase [Streptomyces viridochromogenes DSM 40736]
 gi|302471181|gb|EFL34274.1| adenylate kinase [Streptomyces viridochromogenes DSM 40736]
          Length = 220

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 25/155 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG--- 63
           I   G  GAGK T  + L + L         T +      ++      L+    + G   
Sbjct: 3   IVLVGPPGAGKGTQAAFLAKNLS---IPHISTGDLFRANISQQTELGKLAKSYMDAGNLV 59

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            +   I  A  R++      +P    G   L D F          R+ SQ   LD L  +
Sbjct: 60  PDEVTIAMAKDRME------QPDAENGF--LLDGF---------PRNVSQAEALDEL--L 100

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158
             + +  D  + L++P D  +KR+  R   R  + 
Sbjct: 101 ETENMQLDAVLDLEVPEDEVVKRIAGRRICRNDSA 135


>gi|256112695|ref|ZP_05453616.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella melitensis bv. 3 str. Ether]
 gi|265994138|ref|ZP_06106695.1| sulfate adenylyltransferase [Brucella melitensis bv. 3 str. Ether]
 gi|262765119|gb|EEZ11040.1| sulfate adenylyltransferase [Brucella melitensis bv. 3 str. Ether]
          Length = 644

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T    L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIAKRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITPVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|300771756|ref|ZP_07081627.1| adenylyl-sulfate kinase [Sphingobacterium spiritivorum ATCC
          33861]
 gi|300761142|gb|EFK57967.1| adenylyl-sulfate kinase [Sphingobacterium spiritivorum ATCC
          33861]
          Length = 185

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
          G+ G+GKTT   +LK  L+  +Y V + 
Sbjct: 9  GLSGSGKTTLSKMLKTTLEEDSYRVALV 36


>gi|269836377|ref|YP_003318605.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
           20745]
 gi|269785640|gb|ACZ37783.1| signal recognition particle protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 504

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 14/135 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTTH++ +   L+++     +       PAA     +    G  +    +E   
Sbjct: 107 GLQGSGKTTHVAKIANLLKKEGRRPLMVAADVYRPAA--IDQLQTLGGQIDVPVYSEG-- 162

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
             A  +D  +N ++ A   G  ++    +D+       R       +  ++ I+ + V P
Sbjct: 163 TKANPVDIAKNAVKLARDRGYTVVL---IDT-----AGRLQIDEPMMQEVERIA-EAVKP 213

Query: 131 DCTIILDLPVDIGLK 145
              I+L      G +
Sbjct: 214 H-EILLVADAMTGQE 227


>gi|256824544|ref|YP_003148504.1| hypothetical protein Ksed_06770 [Kytococcus sedentarius DSM 20547]
 gi|256687937|gb|ACV05739.1| hypothetical protein Ksed_06770 [Kytococcus sedentarius DSM 20547]
          Length = 495

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 17/101 (16%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAA--RHVLLSCGVDE- 61
           +   GI G+GK++    L          V+V  +P G  TP A A   + ++L  G++  
Sbjct: 140 VVLAGIVGSGKSSLAKSLYTRSLPFGRRVYVPGDPKGEHTPVANAVGGKAIVLGHGLNTR 199

Query: 62  ------------FGAEAEAIVFAAARLDHVENVIRPALMEG 90
                          +  AI  AA R D +  +    L  G
Sbjct: 200 LNPLDEGHRPTGLSDQEWAITVAARRRDLIGALAETVLARG 240


>gi|226952926|ref|ZP_03823390.1| signal recognition particle-docking protein FtsY [Acinetobacter sp.
           ATCC 27244]
 gi|226836247|gb|EEH68630.1| signal recognition particle-docking protein FtsY [Acinetobacter sp.
           ATCC 27244]
          Length = 371

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 174 GVNGVGKTTTIGKLAKRLQGEGKKVMLAA--GDTFRAAATEQLQIWGERNDIPVVAQG-- 229

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 230 HGADSASVIFDAFESARAKGIDVLIAD 256


>gi|170691215|ref|ZP_02882380.1| Adenylyl-sulfate kinase [Burkholderia graminis C4D1M]
 gi|170143420|gb|EDT11583.1| Adenylyl-sulfate kinase [Burkholderia graminis C4D1M]
          Length = 204

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 14/85 (16%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGK+T    L+R L  + +  +V          +  RH L S    +     E   
Sbjct: 36  GLSGAGKSTIAFELERQLVAQGHACYVL-------DGDNVRHGLGSDLGFDPRDRHE--- 85

Query: 71  FAAARLDHVENVIRPALMEGKILLC 95
               R+ HV  ++  A   G I++ 
Sbjct: 86  -NIRRVAHVAQLMNDA---GLIVIA 106


>gi|156839326|ref|XP_001643355.1| hypothetical protein Kpol_467p9 [Vanderwaltozyma polyspora DSM
          70294]
 gi|322967606|sp|A7TQF3|YFH7_VANPO RecName: Full=ATP-dependent kinase YFH7
 gi|156113962|gb|EDO15497.1| hypothetical protein Kpol_467p9 [Vanderwaltozyma polyspora DSM
          70294]
          Length = 359

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 10/56 (17%)

Query: 8  SFEGIEGAGKTTHISLL--------KRFLQRKN--YDVHVTREPGGTPAAEAARHV 53
             G  G+GK+T  + L          +L+      ++    EP      E  R V
Sbjct: 28 VIVGPPGSGKSTIANELCERLNSMFHEYLKEHGGNIEISGVSEPLPVDITEPIREV 83


>gi|52143484|ref|YP_083345.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus E33L]
 gi|51976953|gb|AAU18503.1| branched-chain amino acid ABC transporter, ATP-binding protein
          [Bacillus cereus E33L]
          Length = 257

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAAR 51
            G  IS  G  GAGKTT  +LL   +     +V+   +E      ++  R
Sbjct: 28 QKGKLISIIGPNGAGKTTLFNLLSGQISPTKGEVYFKGQEITKLSISDRTR 78


>gi|73662843|ref|YP_301624.1| signal recognition particle GTPase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72495358|dbj|BAE18679.1| signal recognition particle GTPase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 406

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L    Q +   V +    G T  A A +   L    +  G +  +  
Sbjct: 183 GVNGVGKTTTIGKLAHRYQAEGKKVMLAA--GDTFRAGAIQQ--LKVWGERVGVDVMSQN 238

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             +     + + I  A  +G  IL+CD
Sbjct: 239 EGSDPAAVMYDAINAAKSKGIDILICD 265


>gi|54295510|ref|YP_127925.1| hypothetical protein lpl2597 [Legionella pneumophila str. Lens]
 gi|53755342|emb|CAH16838.1| hypothetical protein lpl2597 [Legionella pneumophila str. Lens]
          Length = 355

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  Q++   V +
Sbjct: 157 GVNGAGKTTTIGKLAKQFQKQGKKVML 183


>gi|32472535|ref|NP_865529.1| shikimate kinase II [Rhodopirellula baltica SH 1]
 gi|77416377|sp|Q7UU71|AROK_RHOBA RecName: Full=Shikimate kinase; Short=SK
 gi|32443771|emb|CAD73213.1| Shikimate kinase II [Rhodopirellula baltica SH 1]
          Length = 187

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF-A 72
          G GK+T   LL + L   + D+    E   T A ++   +  +     F    EA +   
Sbjct: 18 GCGKSTLAKLLAQKLSLPSVDLDDVIE---TTAGKSIAEIFANETEVGFRDREEAALMEV 74

Query: 73 AARLDHV 79
          + R  HV
Sbjct: 75 SRRPQHV 81


>gi|66806947|ref|XP_637196.1| UMP-CMP kinase [Dictyostelium discoideum AX4]
 gi|166203666|sp|P20425|KCY_DICDI RecName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate
           kinase; AltName: Full=UMP-CMP kinase
 gi|60465609|gb|EAL63690.1| UMP-CMP kinase [Dictyostelium discoideum AX4]
          Length = 195

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 62/212 (29%), Gaps = 43/212 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  +           ++          A +  R    S   D      E I 
Sbjct: 14  GGPGSGKGTQCA-----------NIVRDFGWVHLSAGDLLRQEQQSGSKDG-----EMIA 57

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                 + V +++   L++  I   D       A QG+         +     S +E M 
Sbjct: 58  TMIKNGEIVPSIVTVKLLKNAI---D-------ANQGKNFLVDGFPRNEENNNSWEENMK 107

Query: 131 DCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI-----HEK-RRQIFLD 179
           D       +  D P ++  +R+  R         D  E             K     +  
Sbjct: 108 DFVDTKFVLFFDCPEEVMTQRLLKRGES-SGRSDDNIESIKKRFNTFNVQTKLVIDHY-- 164

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              N+ D+  I+ +      V  ++ N+   +
Sbjct: 165 ---NKFDKVKIIPANRDVNEVYNDVENLFKSM 193


>gi|327440571|dbj|BAK16936.1| ABC-type proline/glycine betaine transport systems, ATPase
          component [Solibacillus silvestris StLB046]
          Length = 379

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 16/24 (66%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G FI+F G  G+GKTT + +L
Sbjct: 25 IKKGEFIAFIGTSGSGKTTALRML 48


>gi|320014322|gb|ADV97893.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          pestis biovar Medievalis str. Harbin 35]
          Length = 580

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|315499779|ref|YP_004088582.1| guanylate kinase [Asticcacaulis excentricus CB 48]
 gi|315417791|gb|ADU14431.1| guanylate kinase [Asticcacaulis excentricus CB 48]
          Length = 213

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 27/170 (15%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           +  GL +      GAGKT+    L       +  +   TR P          H +    +
Sbjct: 7   LRRGLMLIVSSPSGAGKTSLCRRLMADHADLDLSISVTTRSPRPGEKDGREYHFISDAAM 66

Query: 60  DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115
           D+     +A++  AA  DH        +  AL +G+ +L D        +QG +  S   
Sbjct: 67  DDLVKN-DALLEWAAVHDHRYGSPREPVEKALSQGQNVLFD------IDWQGAQRISAKA 119

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165
             D ++             IL  P    ++ ++ R   R     D  +R+
Sbjct: 120 PSDVVR-----------VFIL--PP--SMEELKRRLYARAQDADDVIQRR 154


>gi|307244016|ref|ZP_07526135.1| glycine betaine/L-proline transport ATP binding subunit
          [Peptostreptococcus stomatis DSM 17678]
 gi|306492540|gb|EFM64574.1| glycine betaine/L-proline transport ATP binding subunit
          [Peptostreptococcus stomatis DSM 17678]
          Length = 389

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          N G F+ F G  G+GKTT + +L R L+
Sbjct: 26 NRGEFVCFIGTSGSGKTTLMRMLNRMLE 53


>gi|306825988|ref|ZP_07459324.1| phosphoribulokinase/uridine kinase [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304431704|gb|EFM34684.1| phosphoribulokinase/uridine kinase [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 208

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 22/173 (12%)

Query: 15  AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74
           +GK+T    L + L     ++  T      P   + RH+++         +  A +  A 
Sbjct: 30  SGKSTFAQELYQALDSTTVNLLET-----DPYITSERHLVI--PKQAPDQKVTACLPVAH 82

Query: 75  RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP---- 130
            L  ++  I  AL  G  +L    +D  +        ++ + +  ++ +SV   +P    
Sbjct: 83  ELASLQRDIL-ALQAGMDVLT---IDEPWKASEVLSGAKPILI--VEGMSV-GFLPKELF 135

Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183
           D TI      +  LKR   R +   +    +     +  H+ RR+ +L   R 
Sbjct: 136 DKTICFYTDEETELKRRLARDTTMRNRDASFV----LASHQMRREQYLRYYRE 184


>gi|311744259|ref|ZP_07718063.1| sulfate adenylate transferase/adenylyl-sulfate kinase
           [Aeromicrobium marinum DSM 15272]
 gi|311312432|gb|EFQ82345.1| sulfate adenylate transferase/adenylyl-sulfate kinase
           [Aeromicrobium marinum DSM 15272]
          Length = 612

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 45/156 (28%), Gaps = 48/156 (30%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
             G+ + F G+ G+GK+T    ++R L       +                 +L      
Sbjct: 439 TRGMTLWFTGLSGSGKSTVAVEVERRLVASGQPAY-----------------VLDGDNLR 481

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERD 110
            G  +      A R ++V     V R     G + +         DR           R 
Sbjct: 482 HGLNSGLGFSPADRAENVRRVAEVARLMADAGVVAIVSLVSPYRADR--------DAARA 533

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146
                 L  L+            + +D P++I   R
Sbjct: 534 LHDADGLSFLE------------VFMDTPLEIAEAR 557


>gi|296134816|ref|YP_003642058.1| sulfate adenylyltransferase, large subunit [Thiomonas intermedia
           K12]
 gi|295794938|gb|ADG29728.1| sulfate adenylyltransferase, large subunit [Thiomonas intermedia
           K12]
          Length = 609

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +LL++ L  +    +                 +L       G   + 
Sbjct: 448 FTGLSGSGKSTLANLLEKNLHAQGRHTY-----------------VLDGDNVRHGLNRDL 490

Query: 69  IVFAAARLD---HVENVIRPALMEGKILL 94
                 R++    V  V R  +  G +++
Sbjct: 491 GFTEGDRVENIRRVAEVARLMVDAGLMVI 519


>gi|161334715|gb|ABX61050.1| putative adenylylsulfate kinase [Campylobacter jejuni]
 gi|284926630|gb|ADC28982.1| adenylylsulfate kinase [Campylobacter jejuni subsp. jejuni
          IA3902]
          Length = 170

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
            G    A+
Sbjct: 55 RQGRIDMAL 63


>gi|238920274|ref|YP_002933789.1| putative ABC transporter ATP-binding protein YbbL [Edwardsiella
          ictaluri 93-146]
 gi|238869843|gb|ACR69554.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 232

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          +  G F    G  G GK+T + +    L+ +  ++ +  +P G+   EA R 
Sbjct: 29 LQPGEFKVITGPSGCGKSTLLKIAASLLEPQRGEILLQGKPLGSYPPEAYRK 80


>gi|227329862|ref|ZP_03833886.1| putrescine/spermidine ABC transporter ATPase protein
          [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 371

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + L+ 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLIA 57


>gi|284032678|ref|YP_003382609.1| cysteine ABC transporterppermease/ATP-binding protein CydC
           [Kribbella flavida DSM 17836]
 gi|283811971|gb|ADB33810.1| ABC transporter, CydDC cysteine exporter (CydDC- E) family,
           permease/ATP-binding protein CydC [Kribbella flavida DSM
           17836]
          Length = 548

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           +   G  G+GK+T  ++L RFL+ ++ +V +
Sbjct: 368 VVITGPSGSGKSTLAAVLLRFLEPRDGEVLL 398


>gi|269925160|ref|YP_003321783.1| adenylylsulfate kinase [Thermobaculum terrenum ATCC BAA-798]
 gi|269788820|gb|ACZ40961.1| adenylylsulfate kinase [Thermobaculum terrenum ATCC BAA-798]
          Length = 185

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          F G+ GAGKTT    L+  L+ +   V
Sbjct: 10 FTGLSGAGKTTLADRLEPILRERGLKV 36


>gi|221214544|ref|ZP_03587514.1| taurine transport ATP-binding protein taub [Burkholderia
          multivorans CGD1]
 gi|221165434|gb|EED97910.1| taurine transport ATP-binding protein taub [Burkholderia
          multivorans CGD1]
          Length = 265

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G FI+  G  G GK+T ++L+   L+  + +V V   P
Sbjct: 41 RGEFIAIVGPTGCGKSTTLNLITGLLKPASGEVRVMGRP 79


>gi|217034207|ref|ZP_03439626.1| hypothetical protein HP9810_886g44 [Helicobacter pylori 98-10]
 gi|216943375|gb|EEC22834.1| hypothetical protein HP9810_886g44 [Helicobacter pylori 98-10]
          Length = 162

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 44/195 (22%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK++    L   L+    +V  T          + R +    G D F       +F  
Sbjct: 11  GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVRGIFEELGEDNFR------MFEK 61

Query: 74  ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133
             +D ++ +  P       ++                    +  D+L+ +         T
Sbjct: 62  NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94

Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193
             L +  +  +KR+  +   +     D  + K++   EKR+ ++   A        I+D+
Sbjct: 95  FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146

Query: 194 AHSFQSVATNILNIV 208
                +     L  +
Sbjct: 147 RGGLNNSLKQALQFI 161


>gi|195996167|ref|XP_002107952.1| hypothetical protein TRIADDRAFT_19732 [Trichoplax adhaerens]
 gi|190588728|gb|EDV28750.1| hypothetical protein TRIADDRAFT_19732 [Trichoplax adhaerens]
          Length = 668

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 16/97 (16%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDV--HVTREPGGTPAAEAARHV 53
           +G  I+  G  G+GK+T  +L++RF       ++    D+         G+      +  
Sbjct: 450 AGKIIALCGPSGSGKSTIAALIERFYDVQSGSIKLDGIDIKKINPSWLRGSVIGYIHQEP 509

Query: 54  LL-------SCGVDEFGAEAEAIVFAAARLDHVENVI 83
           +L       +       A  E +V  AAR+ + E  I
Sbjct: 510 VLFATSVIENIRYGRPDATDEEVVHNAARMANAEEFI 546


>gi|168182591|ref|ZP_02617255.1| guanylate kinase [Clostridium botulinum Bf]
 gi|182674148|gb|EDT86109.1| guanylate kinase [Clostridium botulinum Bf]
          Length = 209

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 68/216 (31%), Gaps = 46/216 (21%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58
             GL I   G  GAGK T     K  L++++  V     TR P          +  L+  
Sbjct: 3   KKGLLIVISGPSGAGKGTIC---KELLKKEDLWVSVSATTRSPRKEEENG-VHYFFLNKD 58

Query: 59  VDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114
                 E +  +  A    ++    ++ +   +  G  ++                    
Sbjct: 59  EFNERIEKDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVI-------------------- 98

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172
           L +D    + V+E  P+   I  LP   +    R+ NR S      +  F          
Sbjct: 99  LEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRF---------- 148

Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208
            +  + +I         +V+   + +     + +I+
Sbjct: 149 -KAAYKEINYVSKYNYAVVN--DTVEDAVNKVRSII 181


>gi|126701236|ref|YP_001090133.1| ABC transporter ATP-binding protein [Clostridium difficile 630]
 gi|254977238|ref|ZP_05273710.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-66c26]
 gi|255094567|ref|ZP_05324045.1| ABC transporter, ATP-binding protein [Clostridium difficile CIP
          107932]
 gi|255102826|ref|ZP_05331803.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-63q42]
 gi|255308645|ref|ZP_05352816.1| ABC transporter, ATP-binding protein [Clostridium difficile ATCC
          43255]
 gi|255316322|ref|ZP_05357905.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-76w55]
 gi|255518982|ref|ZP_05386658.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-97b34]
 gi|255652163|ref|ZP_05399065.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-37x79]
 gi|260685130|ref|YP_003216415.1| ABC transporter ATP-binding protein [Clostridium difficile CD196]
 gi|260688788|ref|YP_003219922.1| ABC transporter ATP-binding protein [Clostridium difficile
          R20291]
 gi|306521888|ref|ZP_07408235.1| ABC transporter, ATP-binding protein [Clostridium difficile
          QCD-32g58]
 gi|115252673|emb|CAJ70516.1| ABC-type transport system, ATP-binding protein [Clostridium
          difficile]
 gi|260211293|emb|CBA66866.1| ABC transporter, ATP-binding protein [Clostridium difficile
          CD196]
 gi|260214805|emb|CBE07542.1| ABC transporter, ATP-binding protein [Clostridium difficile
          R20291]
          Length = 242

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 3  SGLFISFEGIEGAGKTTHISLL 24
           G  I   G  G GK+T   L+
Sbjct: 30 RGKLIVITGPNGGGKSTIAKLI 51


>gi|88604251|ref|YP_504429.1| signal recognition particle protein Srp54 [Methanospirillum
           hungatei JF-1]
 gi|88189713|gb|ABD42710.1| signal recognition particle subunit FFH/SRP54 (srp54)
           [Methanospirillum hungatei JF-1]
          Length = 437

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 23/153 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G++G+GKTT  + L RF +RK   V V       P A      L                
Sbjct: 103 GLQGSGKTTTTAKLARFFKRKGMRVAVICADTFRPGAYTQIKTLCDKVHVPC-------- 154

Query: 71  FAAARLDH-VENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
                 +H    ++R  L +   ++++ D     +       D      +D L EI+   
Sbjct: 155 -YGDPSEHDARKIVREGLAQLKEEVIIVD-----TQGRHALEDDLITEIID-LNEITKAT 207

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
                   L L   +G +  +      E+  +D
Sbjct: 208 HR-----WLVLDAALGQQAREQARRFHEAVSID 235


>gi|58337571|ref|YP_194156.1| cell division protein [Lactobacillus acidophilus NCFM]
 gi|227904213|ref|ZP_04022018.1| signal recognition particle docking protein FtsY [Lactobacillus
           acidophilus ATCC 4796]
 gi|58254888|gb|AAV43125.1| cell division protein [Lactobacillus acidophilus NCFM]
 gi|227868232|gb|EEJ75653.1| signal recognition particle docking protein FtsY [Lactobacillus
           acidophilus ATCC 4796]
          Length = 431

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  + +   V +
Sbjct: 234 GVNGAGKTTTIGKLAKRFKDEGKSVIL 260


>gi|42518650|ref|NP_964580.1| ABC transporter ATPase component [Lactobacillus johnsonii NCC
          533]
 gi|41582936|gb|AAS08546.1| ABC transporter ATPase component [Lactobacillus johnsonii NCC
          533]
          Length = 217

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFL 28
          NSG F++  G  GAGK+T + ++   L
Sbjct: 27 NSGDFLTIVGPSGAGKSTLLKIIASLL 53


>gi|99078670|ref|YP_611928.1| phosphonate C-P lyase system protein PhnK [Ruegeria sp. TM1040]
 gi|259415315|ref|ZP_05739236.1| phosphonate C-P lyase system protein PhnK [Silicibacter sp.
           TrichCH4B]
 gi|99035808|gb|ABF62666.1| Phosphonate C-P lyase system PhnK [Ruegeria sp. TM1040]
 gi|259348545|gb|EEW60307.1| phosphonate C-P lyase system protein PhnK [Silicibacter sp.
           TrichCH4B]
          Length = 256

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 25/119 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G+GK+T ++ L   L     +V        T        + +S          +     A
Sbjct: 40  GSGKSTLLNCLAGHLDTDGGEVIF-----DTRDRGPVDTLTMSEPERRMLGRTD----WA 90

Query: 74  ARLDHVENVIRPALMEGKIL------LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               H    +R ++  G  +      + DR             + +   +D L  + + 
Sbjct: 91  FVHQHAREGLRMSVSAGGNIGERLMAVGDRHY----------GNIRDRAVDWLDRVEID 139


>gi|86152435|ref|ZP_01070640.1| adenylyl-sulfate kinase [Campylobacter jejuni subsp. jejuni
          HB93-13]
 gi|37719595|gb|AAR01899.1| putative adenylylsulfate kinase [Campylobacter jejuni]
 gi|56797616|emb|CAI38903.1| putative adenylylsulfate kinase [Campylobacter jejuni]
 gi|85843320|gb|EAQ60530.1| adenylyl-sulfate kinase [Campylobacter jejuni subsp. jejuni
          HB93-13]
          Length = 170

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          +NS   I   G+ G+GKTT    L   L+ K  ++            +  R +L     D
Sbjct: 2  INSPYIIWLTGLAGSGKTTIGQALYEKLKLKYKNLIYL-------DGDELREILGHYAYD 54

Query: 61 EFGAEAEAI 69
            G    A+
Sbjct: 55 RQGRIDMAL 63


>gi|116491414|ref|YP_810958.1| guanylate kinase [Oenococcus oeni PSU-1]
 gi|118587039|ref|ZP_01544470.1| guanylate kinase [Oenococcus oeni ATCC BAA-1163]
 gi|290890993|ref|ZP_06554057.1| hypothetical protein AWRIB429_1447 [Oenococcus oeni AWRIB429]
 gi|116092139|gb|ABJ57293.1| guanylate kinase [Oenococcus oeni PSU-1]
 gi|118432560|gb|EAV39295.1| guanylate kinase [Oenococcus oeni ATCC BAA-1163]
 gi|290479392|gb|EFD88052.1| hypothetical protein AWRIB429_1447 [Oenococcus oeni AWRIB429]
          Length = 194

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 15/40 (37%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46
          I   G  GAGKT+    L+          H TREP     
Sbjct: 8  IVITGASGAGKTSVARYLRAKYSVPRVITHTTREPREGEI 47


>gi|51595555|ref|YP_069746.1| ABC transporter ATPase [Yersinia pseudotuberculosis IP 32953]
 gi|153948008|ref|YP_001401776.1| ABC transporter ATP-binding protein [Yersinia pseudotuberculosis
          IP 31758]
 gi|170025123|ref|YP_001721628.1| ABC transporter-like protein [Yersinia pseudotuberculosis YPIII]
 gi|186894611|ref|YP_001871723.1| ABC transporter-like protein [Yersinia pseudotuberculosis PB1/+]
 gi|16611840|gb|AAL27383.1|AF426171_14 putative ABC transporter ElsE [Yersinia pestis]
 gi|51588837|emb|CAH20451.1| ABC transporter multidrug efflux pump, fused ATP-binding domains
          [Yersinia pseudotuberculosis IP 32953]
 gi|152959503|gb|ABS46964.1| ABC transporter, ATP-binding protein [Yersinia pseudotuberculosis
          IP 31758]
 gi|169751657|gb|ACA69175.1| ABC transporter related [Yersinia pseudotuberculosis YPIII]
 gi|186697637|gb|ACC88266.1| ABC transporter related [Yersinia pseudotuberculosis PB1/+]
          Length = 580

 Score = 35.4 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|325845427|ref|ZP_08168720.1| ABC transporter, ATP-binding protein [Turicibacter sp. HGF1]
 gi|325488533|gb|EGC90949.1| ABC transporter, ATP-binding protein [Turicibacter sp. HGF1]
          Length = 277

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          +N G F++  G  G+GK+T   LL   ++    +++V  +     +    R 
Sbjct: 29 INKGEFVTILGHNGSGKSTLSKLLVGLVKANEGEIYVDNQLLDEESVYDIRQ 80


>gi|325963720|ref|YP_004241626.1| signal recognition particle subunit FFH/SRP54 (srp54) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469807|gb|ADX73492.1| signal recognition particle subunit FFH/SRP54 (srp54) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 527

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNY 33
           G++GAGKTT    L ++L+ + +
Sbjct: 107 GLQGAGKTTLAGKLSKWLKAQGH 129


>gi|312958249|ref|ZP_07772771.1| adenosine 5'-phosphosulfate kinase [Pseudomonas fluorescens WH6]
 gi|311287515|gb|EFQ66074.1| adenosine 5'-phosphosulfate kinase [Pseudomonas fluorescens WH6]
          Length = 203

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 32/96 (33%), Gaps = 20/96 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ I   G+  +GK+T    L+  L  +                     ++L      
Sbjct: 25  HRGMAILLTGLPASGKSTLAQGLQAALFEQGRQ-----------------SIVLDGDALR 67

Query: 62  FGAEAEAIVFAAARLDHVENVIRPA---LMEGKILL 94
            G   +     + R +++      A   +  G+I++
Sbjct: 68  RGLNKDLGFADSDRQENIRRASELAALLVENGQIVI 103


>gi|303327304|ref|ZP_07357746.1| putative kinase [Desulfovibrio sp. 3_1_syn3]
 gi|302863292|gb|EFL86224.1| putative kinase [Desulfovibrio sp. 3_1_syn3]
          Length = 160

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQR 30
          M  G  ISF G+ G GK++   LL + ++ 
Sbjct: 1  MRGG-LISFSGLPGVGKSSVARLLAQRIKA 29


>gi|300114619|ref|YP_003761194.1| helicase, RecD/TraA family [Nitrosococcus watsonii C-113]
 gi|299540556|gb|ADJ28873.1| helicase, RecD/TraA family [Nitrosococcus watsonii C-113]
          Length = 727

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            G      G  G GKTT ++ + R ++ K   VH+     G P   AA+ +
Sbjct: 343 RGKITVISGGPGVGKTTVVNSILRIIRAKQIQVHL-----GAPTGRAAKRL 388


>gi|270260817|ref|ZP_06189090.1| uncharacterized ABC transporter ATP-binding protein [Serratia
          odorifera 4Rx13]
 gi|270044301|gb|EFA17392.1| uncharacterized ABC transporter ATP-binding protein [Serratia
          odorifera 4Rx13]
          Length = 576

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 39 GPDGAGKTTLLRMLAGLLK 57


>gi|226487114|emb|CAX75422.1| adenylate kinase 1 [Schistosoma japonicum]
          Length = 197

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 65/208 (31%), Gaps = 36/208 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T    L                     + +  R  + S        +A    
Sbjct: 16  GGPGSGKGTQCEKLVHKFNFN-----------HLSSGDLLRAEVQSGSQKGKELKA---- 60

Query: 71  FAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129
               R + V   V+   L E  I L D   +  +   G             ++     + 
Sbjct: 61  -MMERGELVPLEVVLSLLKETMIKLVD--KNCHFLIDGYPRELDQGL--KFEKEVCPCL- 114

Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------N 183
             C I  D+  ++  KR+  R     +   +  +  +  I ++ R  F ++ +       
Sbjct: 115 --CVINFDVSEEVMRKRLLKR-----AETSNRVDDNEETIVKRFR-TFNELTKPVIEYYK 166

Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211
           + ++   +D++ +   +   + + + + 
Sbjct: 167 KQNKVITIDASGTVDDIFEKLTHELQKF 194


>gi|228996634|ref|ZP_04156273.1| Adenylyl-sulfate kinase [Bacillus mycoides Rock3-17]
 gi|229004282|ref|ZP_04162083.1| Adenylyl-sulfate kinase [Bacillus mycoides Rock1-4]
 gi|228757143|gb|EEM06387.1| Adenylyl-sulfate kinase [Bacillus mycoides Rock1-4]
 gi|228763266|gb|EEM12174.1| Adenylyl-sulfate kinase [Bacillus mycoides Rock3-17]
          Length = 197

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 28/117 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + + R L  KN                   + +L       G   + 
Sbjct: 30  FTGLSASGKSTVANAVARKLFEKNIG-----------------NYVLDGDNIRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               + R +++     V +  + +G I+L         A+       +    D L++
Sbjct: 73  GFSESDRTENIRRIGEVAKLFVDQGTIVLT--------AFISPFRVDRQQVRDILEK 121


>gi|239631754|ref|ZP_04674785.1| ABC-type multidrug transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526219|gb|EEQ65220.1| ABC-type multidrug transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 628

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 14/97 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--------TREPGGTPAAEAARHV 53
             G  ++  G  GAGKTT I+LL+RF       + +         RE   +  A   +  
Sbjct: 410 KPGQMVAIVGPTGAGKTTIINLLERFYDISGGSIRLNGTDTRDMKREAVRSHFAMVLQDT 469

Query: 54  LLSCGVDEFG------AEAEAIVFAAARLDHVENVIR 84
            L  G              +  V AAA+  HV+N +R
Sbjct: 470 WLFTGTIWDNLKYGREDATDDEVLAAAKAAHVDNFVR 506


>gi|224372503|ref|YP_002606875.1| guanylate kinase [Nautilia profundicola AmH]
 gi|223589972|gb|ACM93708.1| guanylate kinase [Nautilia profundicola AmH]
          Length = 208

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 34/105 (32%), Gaps = 15/105 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTRE------PGGTPAAEAARHV 53
            +G  +   G  G+GKT+   ++   L  K Y      TR        G           
Sbjct: 4   KNGSILVISGPSGSGKTSLARVVCEELGDKAYFSISSTTRPIREGEKDGVDYFFLTKEEF 63

Query: 54  LLSCGVDEFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCD 96
           +       F   AE     +  ++       I  AL +G+I+  D
Sbjct: 64  IKDIEDGYFLEWAEVHGNFYGTSKRQ-----IDAALKKGQIVFLD 103


>gi|254282221|ref|ZP_04957189.1| signal recognition particle-docking protein FtsY [gamma
           proteobacterium NOR51-B]
 gi|219678424|gb|EED34773.1| signal recognition particle-docking protein FtsY [gamma
           proteobacterium NOR51-B]
          Length = 374

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 18/133 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT I  +    QR+   V +    G T  A A   +            A+   
Sbjct: 172 GVNGAGKTTTIGKMANRFQREGKKVILAA--GDTFRAAAVEQLQTWGERHGVPVVAQH-- 227

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128
             A     + + +  A   G  +L         A    R  ++   +D L+++   ++++
Sbjct: 228 TGADSASVLFDGLEAARARGADVL--------IADTAGRLQNKSHLMDELEKVVRVMRKL 279

Query: 129 MPDC---TII-LD 137
            PD    T++ LD
Sbjct: 280 DPDAPHETLLVLD 292


>gi|218185481|gb|EEC67908.1| hypothetical protein OsI_35599 [Oryza sativa Indica Group]
          Length = 907

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAE 65
           I+  GI G GKTT ++ +    ++ N+  H       T   EA  R +L   G  E   +
Sbjct: 197 ITVSGIGGLGKTTLVTNVYER-EKVNFAAHAWIVVSQTYNVEALLRKLLRKIGSTELSLD 255

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCD 96
           +   +      D  E + +       +++ D
Sbjct: 256 S---LNNMDAHDLKEEIKKKIEDSKCLIVLD 283


>gi|170765684|ref|ZP_02900495.1| BfpD [Escherichia albertii TW07627]
 gi|170124830|gb|EDS93761.1| BfpD [Escherichia albertii TW07627]
          Length = 531

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 31/116 (26%)

Query: 11  GIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPA-----------------AEAA 50
           G  G+GK+T +  L   L   +R+  ++    +P                       E  
Sbjct: 259 GPTGSGKSTTLKNLLELLYVERRQKVNIISIEDPPEYEIEGTAQLPVTNVETEQQRGEEY 318

Query: 51  RHVL---LSCGVDEFGA----EAEA--IVFAAARLDHVENVIRPALMEGKILLCDR 97
           R  +   L    D        +AE   ++F AA   H   V         I + DR
Sbjct: 319 RKAITAALRSDPDIIMPGEARDAEVINLLFTAAMTGH--QVWTSLHANNAIAIFDR 372


>gi|164688243|ref|ZP_02212271.1| hypothetical protein CLOBAR_01888 [Clostridium bartlettii DSM
          16795]
 gi|164602656|gb|EDQ96121.1| hypothetical protein CLOBAR_01888 [Clostridium bartlettii DSM
          16795]
          Length = 225

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G FI+  G  G+GK+T + LL
Sbjct: 30 IKKGEFIAIVGPSGSGKSTLLHLL 53


>gi|113953900|ref|YP_731824.1| adenylylsulfate kinase [Synechococcus sp. CC9311]
 gi|113881251|gb|ABI46209.1| adenylylsulfate kinase [Synechococcus sp. CC9311]
          Length = 220

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T  + +   L  +    +                 +L       G   + 
Sbjct: 49  FTGLSGAGKSTLANAVNAALFERGLATY-----------------VLDGDNVRHGLCKDL 91

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V +  L  G I+L 
Sbjct: 92  GFSDADREENIRRIGEVAKLFLDAGVIVLT 121


>gi|120401787|ref|YP_951616.1| hypothetical protein Mvan_0772 [Mycobacterium vanbaalenii PYR-1]
 gi|119954605|gb|ABM11610.1| protein of unknown function DUF344 [Mycobacterium vanbaalenii
           PYR-1]
          Length = 303

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 14/36 (38%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42
           I FEG + AGK   I      L  +   V    +P 
Sbjct: 92  IVFEGRDAAGKGGTIKRFMEHLNPRGARVVALEKPT 127


>gi|61888850|ref|NP_001013600.1| adenylate kinase isoenzyme 1 [Bos taurus]
 gi|109940090|sp|P00570|KAD1_BOVIN RecName: Full=Adenylate kinase isoenzyme 1; Short=AK 1; AltName:
           Full=ATP-AMP transphosphorylase 1; AltName:
           Full=Myokinase
 gi|59858267|gb|AAX08968.1| adenylate kinase 1 [Bos taurus]
 gi|92097535|gb|AAI14797.1| Adenylate kinase 1 [Bos taurus]
 gi|296482158|gb|DAA24273.1| adenylate kinase 1 [Bos taurus]
          Length = 194

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 69/220 (31%), Gaps = 52/220 (23%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+   G  G+GK T    + +   +  Y    T         +  R  + S         
Sbjct: 12  FVV--GGPGSGKGTQCEKIVQ---KYGYTHLST--------GDLLRAEVSSGS------- 51

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAY----QGERDSSQHLFL 117
                   AR   +  +    + +G+++    + D   D+  A     +G         +
Sbjct: 52  --------ARGKMLSEI----MEKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREV 99

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177
              +E   +   P   + +D   +   KR+  R     S  +D  E       +KR + +
Sbjct: 100 QQGEEFERRIAQPTLLLYVDAGPETMTKRLLKRGET--SGRVDDNE----ETIKKRLETY 153

Query: 178 LD-----IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211
                  IA  +       V++  S  +V + +   +  L
Sbjct: 154 YKATEPVIAFYEKRGIVRKVNAEGSVDNVFSQVCTHLDAL 193


>gi|46581724|ref|YP_012532.1| ABC transporter ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46451147|gb|AAS97792.1| ABC transporter, ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 221

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF-LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           G FI+  G  G+GK+T +++L    L    +   +      T A EA R+ L        
Sbjct: 30  GEFIAVVGRSGSGKSTLLNVLASLSLPDSGH--VLYEGEDITTATEARRNALRHRDFAVI 87

Query: 63  GAEAEAIVFAAARLDHVENVIRPALME 89
             +   + + +A    +ENV+ P +  
Sbjct: 88  FQQHHLMPYLSA----LENVLLPFMAS 110


>gi|15898021|ref|NP_342626.1| sugar ABC transporter [Sulfolobus solfataricus P2]
 gi|284175127|ref|ZP_06389096.1| sugar ABC transporter [Sulfolobus solfataricus 98/2]
 gi|13814358|gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus P2]
 gi|261602735|gb|ACX92338.1| ABC transporter related protein [Sulfolobus solfataricus 98/2]
          Length = 368

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F+   G  G GKTT + ++   L++    V++
Sbjct: 33 KGEFVVILGPSGEGKTTILKIIAGLLRQDKGHVYL 67


>gi|33861006|ref|NP_892567.1| putative multidrug efflux ABC transporter [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
 gi|33639738|emb|CAE18908.1| putative multidrug efflux ABC transporter [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 338

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-----VTREPGGTPAAEAARHVLL 55
           +N+G      G  GAGK+T I +L   ++    +V      + + P      E   +V  
Sbjct: 26  INAGTLFGILGPNGAGKSTLIKILATLVEPDGGEVFVNNINLIKNP--RKIRELIGYVAQ 83

Query: 56  SCGVDEFGAEAEAIVFAAARLDHVENVIR 84
              +D+     E + F +  L H+    +
Sbjct: 84  DIALDKILTGRELLDFQSD-LYHMNKKEK 111


>gi|5822263|pdb|1QF9|A Chain A, Ph Influences Fluoride Coordination Number Of The Alfx
           Phosphoryl Transfer Transition State Analog In UmpCMP
           Kinase
 gi|5822578|pdb|5UKD|A Chain A, Ph Influences Fluoride Coordination Number Of The Alfx
           Phosphoryl Transfer Transition State Analog
 gi|157834085|pdb|1UKE|A Chain A, UmpCMP KINASE FROM SLIME MOLD
 gi|157836400|pdb|2UKD|A Chain A, UmpCMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP
 gi|157836902|pdb|3UKD|A Chain A, UmpCMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP, AND
           Alf3
 gi|157837007|pdb|4UKD|A Chain A, UmpCMP KINASE FROM SLIME MOLD COMPLEXED WITH ADP, UDP,
           Beryllium Fluoride
 gi|167958|gb|AAA33272.1| UMP-CMP kinase [Dictyostelium discoideum]
          Length = 194

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 62/212 (29%), Gaps = 43/212 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  G+GK T  +           ++          A +  R    S   D      E I 
Sbjct: 13  GGPGSGKGTQCA-----------NIVRDFGWVHLSAGDLLRQEQQSGSKDG-----EMIA 56

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
                 + V +++   L++  I   D       A QG+         +     S +E M 
Sbjct: 57  TMIKNGEIVPSIVTVKLLKNAI---D-------ANQGKNFLVDGFPRNEENNNSWEENMK 106

Query: 131 DCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI-----HEK-RRQIFLD 179
           D       +  D P ++  +R+  R         D  E             K     +  
Sbjct: 107 DFVDTKFVLFFDCPEEVMTQRLLKRGES-SGRSDDNIESIKKRFNTFNVQTKLVIDHY-- 163

Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
              N+ D+  I+ +      V  ++ N+   +
Sbjct: 164 ---NKFDKVKIIPANRDVNEVYNDVENLFKSM 192


>gi|329667829|gb|AEB93777.1| ABC transporter ATPase component [Lactobacillus johnsonii DPC 6026]
          Length = 573

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 21/53 (39%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           +N G FIS  G  GAGKTT    +  F+  +       +        E A  +
Sbjct: 327 INQGDFISIVGQNGAGKTTLCRTICGFISNEGKITLKDQNLSDLSIKERAEKI 379


>gi|328951392|ref|YP_004368727.1| UvrABC system protein A [Marinithermus hydrothermalis DSM 14884]
 gi|328451716|gb|AEB12617.1| UvrABC system protein A [Marinithermus hydrothermalis DSM 14884]
          Length = 953

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 3  SGLFISFEGIEGAGKTTHI 21
           G FI   G+ G+GK+T  
Sbjct: 23 RGKFIVITGVSGSGKSTLA 41


>gi|322379214|ref|ZP_08053605.1| adenylate kinase [Helicobacter suis HS1]
 gi|321148354|gb|EFX42863.1| adenylate kinase [Helicobacter suis HS1]
          Length = 189

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 39/220 (17%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +   I   G  G+GKTT   L+          VH +   G    AE A        + 
Sbjct: 1   MKALFLII--GAPGSGKTTDAQLIAERNSAS--MVHYST--GDLLRAEIASQSQRGMQIA 54

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLD 118
           +F ++ E +      L+ V + I  A+     +I++ D +  S           +     
Sbjct: 55  QFTSKGELVP-----LEIVIDTIIHAIKNASKEIIIIDGYPRSVEQMHALDRVLKAQEEV 109

Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178
            L+ +            + +   +  +RV  R    +S          + +   R Q++L
Sbjct: 110 KLKGVVE----------VKVSEAVARERVLGRSRGDDS----------LEVFNNRMQVYL 149

Query: 179 DIARNQPDRCHI------VDSAHSFQSVATNILNIVWELV 212
               +  +   +      ++   S + +  +I   +   +
Sbjct: 150 KPIESIVEFYKVLEVHQEINGERSVEEIVNDIETYIKNQL 189


>gi|303233378|ref|ZP_07320047.1| excinuclease ABC, A subunit [Atopobium vaginae PB189-T1-4]
 gi|302480507|gb|EFL43598.1| excinuclease ABC, A subunit [Atopobium vaginae PB189-T1-4]
          Length = 961

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 10/61 (16%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDE 61
           GLF    G+ G+GK++ I   L + L     +V+ T  P G         +L L    + 
Sbjct: 637 GLFTVVTGVSGSGKSSLIEDTLSKALAN---EVYHTNYPTGPYI-----EILGLKDEDEH 688

Query: 62  F 62
            
Sbjct: 689 M 689


>gi|302558146|ref|ZP_07310488.1| signal recognition particle protein [Streptomyces griseoflavus
           Tu4000]
 gi|302475764|gb|EFL38857.1| signal recognition particle protein [Streptomyces griseoflavus
           Tu4000]
          Length = 545

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVT 38
           G++GAGKTT    L R+L+ + +   + 
Sbjct: 136 GLQGAGKTTLAGKLGRWLKEQGHSPVLV 163


>gi|302522850|ref|ZP_07275192.1| ABC transporter ATP-binding protein [Streptomyces sp. SPB78]
 gi|302431745|gb|EFL03561.1| ABC transporter ATP-binding protein [Streptomyces sp. SPB78]
          Length = 542

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVLLSCGVDEFG 63
           G  GAGKTT + LL   LQ     V        + +  G        R +L+S       
Sbjct: 40  GPNGAGKTTLLRLLSGELQPHGGAVTSSGGLGVMPQFVGSVRDESTVRDLLVSVAQPRIR 99

Query: 64  AEAEAIVFAAARLDH 78
             A A+     + +H
Sbjct: 100 EAARAV----DKAEH 110


>gi|302347883|ref|YP_003815521.1| MoxR-like ATPase [Acidilobus saccharovorans 345-15]
 gi|302328295|gb|ADL18490.1| MoxR-like ATPase [Acidilobus saccharovorans 345-15]
          Length = 307

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----------------- 51
            EG  G GKTT   LL + +  +   V +T +   +    A                   
Sbjct: 43  LEGPPGVGKTTLAKLLAQAMGGQFKRVQMTSDLLPSDVIGAMVWDQAKGEFRFRPGPIFA 102

Query: 52  HVLLSCGVDEFGAEAE-AIVFAAARLDHVENVIRPALMEGKILLC 95
           +V+L   ++      + A++ A A      +V    L    +++ 
Sbjct: 103 NVVLVDELNRATPRTQSALLEAMAEGQVTVDVNTHQLPRPFLVIA 147


>gi|295424922|ref|ZP_06817634.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
           amylolyticus DSM 11664]
 gi|295065361|gb|EFG56257.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
           amylolyticus DSM 11664]
          Length = 569

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           +N G F+S  G  GAGKTT   ++  F++ +       +        E A  +
Sbjct: 327 INQGDFVSIVGQNGAGKTTLCRIICGFIENEGQAFFKDQNLADLSIKERAEKI 379


>gi|284044145|ref|YP_003394485.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283948366|gb|ADB51110.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 271

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGVDE 61
           G F    G    GK+T +  L R L+ +   V +   E    PA + AR + LL      
Sbjct: 29  GSFTVVVGPNACGKSTLLRALARMLKPRAGSVVLDGAEIRSQPAKDVARRLGLLPQSPVA 88

Query: 62  FGAEAEAIVFAAARLDH 78
             A   A + A  R  H
Sbjct: 89  PDAITVADLVARGRYPH 105


>gi|283835486|ref|ZP_06355227.1| adenylyl-sulfate kinase [Citrobacter youngae ATCC 29220]
 gi|291068687|gb|EFE06796.1| adenylyl-sulfate kinase [Citrobacter youngae ATCC 29220]
          Length = 201

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVDAGLVVLT 105


>gi|262190514|ref|ZP_06048759.1| adenylylsulfate kinase [Vibrio cholerae CT 5369-93]
 gi|262033610|gb|EEY52103.1| adenylylsulfate kinase [Vibrio cholerae CT 5369-93]
          Length = 215

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 44  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 87  GFSEQDRRENIRRIGELAKLMADAGLIVLT 116


>gi|260582647|ref|ZP_05850436.1| cytidylate kinase [Haemophilus influenzae NT127]
 gi|260094319|gb|EEW78218.1| cytidylate kinase [Haemophilus influenzae NT127]
          Length = 246

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 23 GMIITVDGPSGAGKGTLCYALAEKL 47


>gi|271970038|ref|YP_003344234.1| ABC transporter ATP-binding protein [Streptosporangium roseum DSM
           43021]
 gi|270513213|gb|ACZ91491.1| ABC transporter ATP-binding protein [Streptosporangium roseum DSM
           43021]
          Length = 275

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 69/207 (33%), Gaps = 47/207 (22%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHV----TREPGGTPAAEAAR 51
            G   +  G  GAGKTT + +L   L+          +DV       RE        AA 
Sbjct: 35  RGSIFALLGSNGAGKTTAVKILSTLLKADAGTASVNGFDVATQAADVRESISLTGQFAAV 94

Query: 52  HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL--LCDRF--LDSSYAYQG 107
             +LS   +         +   ARL H+++        GKI   L DRF   D+      
Sbjct: 95  DEILSGREN---------LVLVARLRHLKDP-------GKIADDLLDRFSLTDAGARKAS 138

Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGL---KRVQNRYSLRESACLDYFER 164
                    LD    +          I LD     GL    R++   ++RE A  D    
Sbjct: 139 TYSGGMRRRLDIAMSLVGNPP----VIFLD-EPTTGLDPQARIEVWQTVRELA--DR--- 188

Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIV 191
               +    +  +LD A    DR  I+
Sbjct: 189 -GTTVLLTTQ--YLDEAEQLADRIAIL 212


>gi|229524539|ref|ZP_04413944.1| adenylylsulfate kinase [Vibrio cholerae bv. albensis VL426]
 gi|229338120|gb|EEO03137.1| adenylylsulfate kinase [Vibrio cholerae bv. albensis VL426]
          Length = 215

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 44  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 87  GFSEQDRRENIRRIGELAKLMADAGLIVLT 116


>gi|228990533|ref|ZP_04150498.1| Adenylyl-sulfate kinase [Bacillus pseudomycoides DSM 12442]
 gi|228769059|gb|EEM17657.1| Adenylyl-sulfate kinase [Bacillus pseudomycoides DSM 12442]
          Length = 197

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 28/117 (23%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + + R L  KN                   + +L       G   + 
Sbjct: 30  FTGLSASGKSTVANAVARKLFEKNIG-----------------NYVLDGDNIRHGLNKDL 72

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122
               + R +++     V +  + +G I+L         A+       +    D L++
Sbjct: 73  GFSESDRTENIRRIGEVAKLFVDQGTIVLT--------AFISPFRVDRQQVRDILEK 121


>gi|227437445|gb|ACP30474.1| shikimate kinase [Streptomyces venezuelae ATCC 10712]
          Length = 173

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 66/208 (31%), Gaps = 41/208 (19%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           M +G  +   G  G+GK+T  +LL   L     D   T              + +  G +
Sbjct: 1   MTAGPLVVLVGPMGSGKSTVGALLAERLGAPYRD---TDADIVAAEGRKISDIFVEDGEE 57

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
            F A  E    AAA  +H        L  G   + D          G R       +   
Sbjct: 58  HFRAL-ERDAVAAAVAEH-----EGVLALGGGAVLD---------AGTRALLAGRPVA-- 100

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                          L + VD  ++RV    +    A      R+   + E RR ++ ++
Sbjct: 101 --------------YLSMDVDEAVRRVGLNTARPLLAVNPR--RQWRELMEARRHLYTEV 144

Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208
           AR         D   + + VA  +L  +
Sbjct: 145 ARA----VVTTD-DRTPEEVADAVLAAL 167


>gi|227545273|ref|ZP_03975322.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri CF48-3A]
 gi|300908655|ref|ZP_07126118.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri SD2112]
 gi|227184742|gb|EEI64813.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri CF48-3A]
 gi|300894062|gb|EFK87420.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus reuteri SD2112]
          Length = 254

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 45/188 (23%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHV 53
           +N G FI+  G  GAGK+T  +++   L            D+  T E   T        V
Sbjct: 33  INEGDFITIVGTNGAGKSTLFNVIGGNLHADEGKILHNGQDITNTTEEQRTAF---LSRV 89

Query: 54  LLSCGVDEFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFL------------ 99
                +         E ++ A  R +   ++I   L        DRF             
Sbjct: 90  FQDPKLGTAARMTVAENMLLATKRGER-RHLIPRKLKSN----MDRFTKLAATMNNGLEN 144

Query: 100 ---DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRY 151
               ++ A  G +  +    + +++        PD  I+LD     L     L  +    
Sbjct: 145 RMNTATGALSGGQRQALSFLMATIK-------RPDI-ILLDEHTAALDPHTSLNLLHATN 196

Query: 152 SLRESACL 159
                  L
Sbjct: 197 ERITKDHL 204


>gi|224417782|ref|ZP_03655788.1| ABC transporter ATP-binding protein [Helicobacter canadensis MIT
          98-5491]
 gi|253827124|ref|ZP_04870009.1| ABC transporter, ATP-binding protein [Helicobacter canadensis MIT
          98-5491]
 gi|313141325|ref|ZP_07803518.1| abc transporter [Helicobacter canadensis MIT 98-5491]
 gi|253510530|gb|EES89189.1| ABC transporter, ATP-binding protein [Helicobacter canadensis MIT
          98-5491]
 gi|313130356|gb|EFR47973.1| abc transporter [Helicobacter canadensis MIT 98-5491]
          Length = 213

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
            G  IS  G+ G+GK+T + LL  FL+ +  +V
Sbjct: 25 KEGEIISIMGVSGSGKSTLLHLLSSFLKPQKGEV 58


>gi|237806812|ref|YP_002891252.1| maltose/maltodextrin transporter ATP-binding protein [Tolumonas
          auensis DSM 9187]
 gi|237499073|gb|ACQ91666.1| ABC transporter related [Tolumonas auensis DSM 9187]
          Length = 369

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F+ F G  G GK+T + ++ 
Sbjct: 26 INNGEFVVFVGPSGCGKSTLLRMIA 50


>gi|193212998|ref|YP_001998951.1| putative bifunctional molybdopterin-guanine dinucleotide
          biosynthesis protein MobB/MobA [Chlorobaculum parvum
          NCIB 8327]
 gi|193086475|gb|ACF11751.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Chlorobaculum parvum NCIB 8327]
          Length = 369

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35
          I+  G+ G+GKTT +  L R      ++V
Sbjct: 7  IAVGGLSGSGKTTLVEKLIRRFSENGFEV 35


>gi|149188434|ref|ZP_01866727.1| ABC transporter related protein [Vibrio shilonii AK1]
 gi|148837652|gb|EDL54596.1| ABC transporter related protein [Vibrio shilonii AK1]
          Length = 363

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          ++ G FI F G  G GK+T + ++ 
Sbjct: 26 IDQGEFIVFVGPSGCGKSTLLRMIA 50


>gi|126726875|ref|ZP_01742714.1| hypothetical protein RB2150_03144 [Rhodobacterales bacterium
           HTCC2150]
 gi|126703833|gb|EBA02927.1| hypothetical protein RB2150_03144 [Rhodobacterales bacterium
           HTCC2150]
          Length = 289

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           + FEG + AGK   I  + + L  +   +    +P      E          + E  A  
Sbjct: 76  VVFEGRDAAGKGGTIKRITQHLSSRIARIVALTKPTEREQGEW----YFQRYIKELPARE 131

Query: 67  EAIVFAAARLDHVENVIRP 85
           E  +F   R  +   V+  
Sbjct: 132 EMSLF--DRSWYNRGVVEH 148


>gi|170731732|ref|YP_001763679.1| glycerol-3-phosphate transporter ATP-binding subunit
          [Burkholderia cenocepacia MC0-3]
 gi|169814974|gb|ACA89557.1| ABC transporter related [Burkholderia cenocepacia MC0-3]
          Length = 361

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FI   G  G GK+T + ++   L+            V  T EP     A   ++  L 
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAG-LESVTDGEIAIGDRVVNTLEPKDRDIAMVFQNYALY 88

Query: 57 CGVD 60
            + 
Sbjct: 89 PHMT 92


>gi|90420821|ref|ZP_01228727.1| ATP-binding protein, ABC-type multidrug efflux transporter
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90335112|gb|EAS48873.1| ATP-binding protein, ABC-type multidrug efflux transporter
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 288

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
            G F +  G  GAGK+T  SL+ R    +   + +   P      EA R +
Sbjct: 65  QGSFTALLGPNGAGKSTLFSLVTRLFNVREGQIEILGWPLDRHPGEALRRL 115


>gi|254246555|ref|ZP_04939876.1| Dipeptide transport ATP-binding protein [Burkholderia cenocepacia
          PC184]
 gi|124871331|gb|EAY63047.1| Dipeptide transport ATP-binding protein [Burkholderia cenocepacia
          PC184]
          Length = 361

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FI   G  G GK+T + ++   L+            V  T EP     A   ++  L 
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAG-LESVTDGEIAIGDRVVNTLEPKDRDIAMVFQNYALY 88

Query: 57 CGVD 60
            + 
Sbjct: 89 PHMT 92


>gi|115522346|ref|YP_779257.1| signal recognition particle-docking protein FtsY [Rhodopseudomonas
           palustris BisA53]
 gi|115516293|gb|ABJ04277.1| signal recognition particle-docking protein FtsY [Rhodopseudomonas
           palustris BisA53]
          Length = 316

 Score = 35.4 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ G+GKTT I  L   L  +   V +    G T  A A   +
Sbjct: 117 GVNGSGKTTTIGKLAARLSGEGRKVMLAA--GDTFRAAAIEQL 157


>gi|303241762|ref|ZP_07328258.1| ABC transporter related protein [Acetivibrio cellulolyticus CD2]
 gi|302590643|gb|EFL60395.1| ABC transporter related protein [Acetivibrio cellulolyticus CD2]
          Length = 242

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 26/129 (20%)

Query: 7   ISFE--------GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           I+ E        G  GAGKTT I ++   L+  + ++ +     GT   E+        G
Sbjct: 23  ITIEDGEIFGFLGPNGAGKTTTIKMITGILRPDSGNIRI----NGTDINESPLEAKKKFG 78

Query: 59  VDEFGAE-------AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGE 108
                          E + F A   D      +  +      L +RF  SS  Y   Q  
Sbjct: 79  FVPDDPNIFLRLKGIEYLNFMADMYDVSAGDRKQRIES----LAERFEMSSALYDQIQSY 134

Query: 109 RDSSQHLFL 117
               +   +
Sbjct: 135 SHGMRQKIV 143


>gi|288905484|ref|YP_003430706.1| proline/glycine betaine ABC transporter ATP-binding protein
          [Streptococcus gallolyticus UCN34]
 gi|306831567|ref|ZP_07464725.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
          transporter, ABC protein [Streptococcus gallolyticus
          subsp. gallolyticus TX20005]
 gi|325978473|ref|YP_004288189.1| choline/proline/glycine betaine ABC uptake transporter
          ATP-binding protein [Streptococcus gallolyticus subsp.
          gallolyticus ATCC BAA-2069]
 gi|288732210|emb|CBI13775.1| putative proline/glycine betaine ABC transporter ATP-binding
          protein [Streptococcus gallolyticus UCN34]
 gi|304426352|gb|EFM29466.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
          transporter, ABC protein [Streptococcus gallolyticus
          subsp. gallolyticus TX20005]
 gi|325178401|emb|CBZ48445.1| choline/proline/glycine betaine ABC uptake transporter
          ATP-binding protein [Streptococcus gallolyticus subsp.
          gallolyticus ATCC BAA-2069]
          Length = 257

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +G FI+  G  G+GKTT + ++ + ++
Sbjct: 31 NGEFITILGTSGSGKTTMLKMINKLIE 57


>gi|284053990|ref|ZP_06384200.1| guanylate kinase [Arthrospira platensis str. Paraca]
          Length = 184

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 47/165 (28%), Gaps = 22/165 (13%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60
            +G  I   G  G GK T I  L +   + +  V   TR P            +      
Sbjct: 5   KTGQLIVITGPSGVGKGTIIRSLLKKHPQLHLSVSVTTRSPRPGEVDGKDYFFVTRDRFQ 64

Query: 61  EFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117
           +   + E +    FA          I   + +G+ +L                  +    
Sbjct: 65  QMVQQQELLEWAEFAGNFYGTPRLAIEHKIQQGENVLL---------------EIELEGA 109

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162
             + +   Q V      IL   +     R++NR +  E A     
Sbjct: 110 RQVSQTFPQAVR---IFILPPDLQELENRLRNRATDSEEAIARRI 151


>gi|283781372|ref|YP_003372127.1| cytidylate kinase [Pirellula staleyi DSM 6068]
 gi|283439825|gb|ADB18267.1| cytidylate kinase [Pirellula staleyi DSM 6068]
          Length = 223

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFL 28
          + ++ +G  GAGK++   +L   L
Sbjct: 1  MIVTIDGPAGAGKSSIARVLAERL 24


>gi|255321448|ref|ZP_05362608.1| polyphosphate kinase 2 family protein [Campylobacter showae RM3277]
 gi|255301601|gb|EET80858.1| polyphosphate kinase 2 family protein [Campylobacter showae RM3277]
          Length = 269

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 27/95 (28%), Gaps = 28/95 (29%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I  EG + AGK   I  L   L  +   +    +P     ++                 
Sbjct: 39  LIIIEGRDAAGKGGSIKRLTEHLNPRGCRIVALEKPSDVERSQW---------------- 82

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100
                +    + H+          G+I++ DR   
Sbjct: 83  -----YFQRYVAHLP-------SAGEIVIFDRSWY 105


>gi|255326590|ref|ZP_05367667.1| signal recognition particle protein [Rothia mucilaginosa ATCC
           25296]
 gi|283457889|ref|YP_003362490.1| signal recognition particle GTPase [Rothia mucilaginosa DY-18]
 gi|255296330|gb|EET75670.1| signal recognition particle protein [Rothia mucilaginosa ATCC
           25296]
 gi|283133905|dbj|BAI64670.1| signal recognition particle GTPase [Rothia mucilaginosa DY-18]
          Length = 525

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYD 34
           G++GAGKTT    L  +L+ + + 
Sbjct: 107 GLQGAGKTTLAGKLAHWLKGQGHT 130


>gi|300024820|ref|YP_003757431.1| signal recognition particle-docking protein FtsY [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526641|gb|ADJ25110.1| signal recognition particle-docking protein FtsY [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 390

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ G GKTT I  L + L+ +   V +    G T  A A   +
Sbjct: 195 GVNGTGKTTTIGKLAQKLKAEGKSVVLAA--GDTFRAAAIDQL 235


>gi|255261937|ref|ZP_05341279.1| lactose transport ATP-binding protein LacK [Thalassiobium sp.
           R2A62]
 gi|255104272|gb|EET46946.1| lactose transport ATP-binding protein LacK [Thalassiobium sp.
           R2A62]
          Length = 367

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 8/93 (8%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHV 53
           + +G  I F G  G GK+T + ++          L+     V     P     A   +  
Sbjct: 27  ITTGELIVFVGPSGCGKSTLLRMIAGLEKISEGTLEIDG-TVVNDVPPAQRGIAMVFQSY 85

Query: 54  LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPA 86
            L   +      A A+  A      ++  I  A
Sbjct: 86  ALYPHMTVRDNMAFALKLAKNSATEIDEAITRA 118


>gi|313125927|ref|YP_004036197.1| ABC multidrug transporter ATPase/permease component
           [Halogeometricum borinquense DSM 11551]
 gi|312292292|gb|ADQ66752.1| ABC-type multidrug transport system, ATPase and permease component
           [Halogeometricum borinquense DSM 11551]
          Length = 634

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRF 27
            G FI+  G  GAGK+T +SLL R 
Sbjct: 391 RGEFIAIVGGSGAGKSTIVSLLARL 415


>gi|227872401|ref|ZP_03990748.1| signal recognition particle-docking protein FtsY [Oribacterium
           sinus F0268]
 gi|227841761|gb|EEJ52044.1| signal recognition particle-docking protein FtsY [Oribacterium
           sinus F0268]
          Length = 291

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           IS  G+ G GKTT I  L   L++K   V +
Sbjct: 91  ISVIGVNGVGKTTSIGKLAYHLKKKGKKVIL 121


>gi|227111570|ref|ZP_03825226.1| putrescine/spermidine ABC transporter ATPase protein
          [Pectobacterium carotovorum subsp. brasiliensis
          PBR1692]
          Length = 371

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + L+ 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLIA 57


>gi|223984810|ref|ZP_03634920.1| hypothetical protein HOLDEFILI_02217 [Holdemania filiformis DSM
           12042]
 gi|223963219|gb|EEF67621.1| hypothetical protein HOLDEFILI_02217 [Holdemania filiformis DSM
           12042]
          Length = 623

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 15/105 (14%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---LLSC 57
           +N+G  ++  G  GAGKTT + LL RF +  +  ++V  +          R +   +L  
Sbjct: 406 INAGKRVAIVGPTGAGKTTIVKLLMRFYELNSGTIYVDGQDIKNYKRSDLRSLFGMVLQD 465

Query: 58  GVDEFGAEAEAIVF-----------AAARLDHVENVIRPALMEGK 91
                G   E + +           AAA+  HV++ IR  L  G 
Sbjct: 466 AWLFNGTVMENLRYGRLDATDQEVIAAAKAAHVDHFIR-TLDHGY 509


>gi|169349804|ref|ZP_02866742.1| hypothetical protein CLOSPI_00542 [Clostridium spiroforme DSM
          1552]
 gi|169293372|gb|EDS75505.1| hypothetical protein CLOSPI_00542 [Clostridium spiroforme DSM
          1552]
          Length = 234

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G F+   G  GAGKTT ++LL
Sbjct: 31 IQKGEFVVIVGPSGAGKTTILNLL 54


>gi|163745246|ref|ZP_02152606.1| polyamine ABC transporter, ATP-binding protein [Oceanibulbus
          indolifex HEL-45]
 gi|161382064|gb|EDQ06473.1| polyamine ABC transporter, ATP-binding protein [Oceanibulbus
          indolifex HEL-45]
          Length = 363

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI+  G  G+GKTT + +L 
Sbjct: 36 GEFITLLGPSGSGKTTVLMMLA 57


>gi|218532107|ref|YP_002422923.1| ABC transporter [Methylobacterium chloromethanicum CM4]
 gi|218524410|gb|ACK84995.1| ABC transporter related [Methylobacterium chloromethanicum CM4]
          Length = 286

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G F+S  G  G GK+T ++ L  FL      V V
Sbjct: 36 RPGEFVSIVGPSGCGKSTLLNALAGFLTPSGGRVTV 71


>gi|123433968|ref|XP_001308717.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121890411|gb|EAX95787.1| hypothetical protein TVAG_353990 [Trichomonas vaginalis G3]
          Length = 209

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 7  ISFEGIEGAGKTTHISLLKRFL 28
          I   G  GAGK+T  +LL ++L
Sbjct: 6  IVITGPIGAGKSTVCNLLSKYL 27


>gi|90020849|ref|YP_526676.1| signal recognition particle subunit FFH/SRP54 (srp54) /
           transcription elongation factor GreB [Saccharophagus
           degradans 2-40]
 gi|89950449|gb|ABD80464.1| signal recognition particle subunit FFH/SRP54 (srp54) /
           transcription elongation factor GreB [Saccharophagus
           degradans 2-40]
          Length = 495

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 13/114 (11%)

Query: 11  GIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69
           G++GAGKTT ++ L RFL+ +    V V       PAA   + +      +    E EA 
Sbjct: 133 GLQGAGKTTSVAKLARFLREREKKKVMVVSADVYRPAA--IKQL------ETLATEVEAE 184

Query: 70  VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
            F +    +  ++ + AL + K L     +D        R       ++ +Q I
Sbjct: 185 FFPSDAGQNPVDIAKNALAQAKKL----HVDVLLVDTAGRLHVDEALMEEIQAI 234


>gi|56550899|ref|YP_161738.1| adenylylsulfate kinase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56542473|gb|AAV88627.1| Adenylyl-sulfate kinase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 210

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GL + F G+ G+GK+T    L++ L  +N                     LL      
Sbjct: 35  HKGLVLWFTGLSGSGKSTVAGALEQVLHSRNVS-----------------SYLLDGDNIR 77

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +     A R +++     V +     G ++L 
Sbjct: 78  HGLCRDLGFSDADRKENIRRVGEVAKLMADAGLVVLT 114


>gi|56414881|ref|YP_151956.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363809|ref|YP_002143446.1| adenylylsulfate kinase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81359847|sp|Q5PEH3|CYSC_SALPA RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|238689959|sp|B5BEY7|CYSC_SALPK RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase;
           AltName: Full=ATP adenosine-5'-phosphosulfate
           3'-phosphotransferase; AltName:
           Full=Adenosine-5'-phosphosulfate kinase
 gi|56129138|gb|AAV78644.1| adenosine 5-phosphosulfate kinase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095286|emb|CAR60839.1| adenosine 5-phosphosulfate kinase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 201

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G+ + F G+ G+GK+T    L+  L ++    +                 LL      
Sbjct: 26  HRGVMLWFTGLSGSGKSTVAGALEEALHQRGVSTY-----------------LLDGDNVR 68

Query: 62  FGAEAEAIVFAAARLDHVENVIRPA---LMEGKILLC 95
            G   +     A R +++  V   A      G I+L 
Sbjct: 69  HGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLT 105


>gi|42519415|ref|NP_965345.1| guanylate kinase [Lactobacillus johnsonii NCC 533]
 gi|45477016|sp|P60552|KGUA_LACJO RecName: Full=Guanylate kinase; AltName: Full=GMP kinase
 gi|41583703|gb|AAS09311.1| guanylate kinase [Lactobacillus johnsonii NCC 533]
 gi|329667060|gb|AEB93008.1| guanylate kinase [Lactobacillus johnsonii DPC 6026]
          Length = 204

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 60/170 (35%), Gaps = 27/170 (15%)

Query: 2   NSGLFISFEGIEGAGKTTH-ISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59
           + GL +   G  G GK T   +++K+      Y V   TR+P          + +     
Sbjct: 3   HQGLLLVLSGPSGVGKGTVKSAMVKQKAFSFEYSVSMTTRKPRPGEVNGKDYYFVSEDRF 62

Query: 60  DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116
            E     E + +     +H    + P    L EGK +L +  +D + A Q          
Sbjct: 63  QEAIKGNELLEYNEYVGNHYGTPLAPVQKMLNEGKDVLLE--IDVNGAKQ---------- 110

Query: 117 LDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFER 164
                   V+++MPD   I   P D      R+ NR +  +       ++
Sbjct: 111 --------VRKLMPDGVFIFLTPPDLHELKHRIVNRGTDSDKVIAMRMKQ 152


>gi|325478439|gb|EGC81553.1| ABC transporter, ATP-binding protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 361

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 6/85 (7%)

Query: 6   FISFEGIEGAGKTTHISLLK------RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59
           F    G  G GK+T + ++           + N  +  T EP     A   +   L   +
Sbjct: 32  FCVILGPSGCGKSTLLRMIAGLNSITEGTLKFNDKIMNTVEPKDRDIAMVFQSYALYPHM 91

Query: 60  DEFGAEAEAIVFAAARLDHVENVIR 84
             +   A ++     R + ++  I+
Sbjct: 92  TVYDNMAFSLNMKKERKEVIDQRIQ 116


>gi|310830010|ref|YP_003962367.1| CobW-like protein with a nucleotide-binding domain [Eubacterium
          limosum KIST612]
 gi|308741744|gb|ADO39404.1| CobW-like protein with a nucleotide-binding domain [Eubacterium
          limosum KIST612]
          Length = 207

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 14 GAGKTTHISLLKRFLQRKNYDV 35
          G+GKTT ++L  R+L  K Y +
Sbjct: 15 GSGKTTLLNLTARYLTEKGYKI 36


>gi|307103111|gb|EFN51375.1| hypothetical protein CHLNCDRAFT_141154 [Chlorella variabilis]
          Length = 274

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 71/217 (32%), Gaps = 67/217 (30%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L  +    H T               LL       G   + 
Sbjct: 74  FTGLSGSGKSTVACTLEHLLHERG---HFTS--------------LLDGDNIRHGLNKDL 116

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
              A  R +++     V R     G I        +  ++     + + +  +     + 
Sbjct: 117 GFSAEDRAENIRRIGEVARLFADAGAI--------TMTSFISPYRADREMVRERCN--AG 166

Query: 126 QEVMPDCTIILDLPVDIGLKR------VQNRYSLRES--ACLDYFERKDVMIHEKRRQIF 177
           + +     + +++P+++  +R       + R  L ++     D +E              
Sbjct: 167 EFLE----VFMNIPLEVCEQRDPKGLYKKARAGLIKNFTGIDDPYE-------------- 208

Query: 178 LDIARNQPDRCHIVDS------AHSFQSVATNILNIV 208
              A  +P+   +VD         S + +A  IL ++
Sbjct: 209 ---APLEPE--IVVDCFDADGQQRSPRDMAEQILEVL 240


>gi|305663117|ref|YP_003859405.1| ATPase [Ignisphaera aggregans DSM 17230]
 gi|304377686|gb|ADM27525.1| ATPase [Ignisphaera aggregans DSM 17230]
          Length = 363

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 12/45 (26%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51
          I   G EG GKT         L+   Y V               R
Sbjct: 43 IVIYGPEGCGKTALFKQTYEILESMGYTVIYVNPIEDEEEEWRIR 87


>gi|300813941|ref|ZP_07094244.1| cytidylate kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511946|gb|EFK39143.1| cytidylate kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 172

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ 29
          I+ +G  G+GK+T    +   L 
Sbjct: 3  IAIDGPAGSGKSTVAKKIAEKLN 25


>gi|294497672|ref|YP_003561372.1| putative ABC transporter ATP-binding/permease [Bacillus megaterium
           QM B1551]
 gi|294347609|gb|ADE67938.1| putative ABC transporter, ATP-binding/permease protein [Bacillus
           megaterium QM B1551]
          Length = 594

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 30/116 (25%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRF----------------------LQRKNYDVHVTR 39
             G  ++  G  G+GKTT I+LL RF                      L+ +   V    
Sbjct: 380 KKGEMVALVGPTGSGKTTIINLLTRFYDISNGDIKIDGRSISDYNIHDLRNRIGIVLQDT 439

Query: 40  EPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                  A+  R   L    +E          +AA++ +  + I+    +   ++ 
Sbjct: 440 YLFSGTIADNIRFGRLDASDEEVK--------SAAKMANAHSFIKHLPQQYNTVIS 487


>gi|288556860|ref|YP_003428795.1| phosphonate ABC transporter ATP-binding protein [Bacillus
          pseudofirmus OF4]
 gi|288548020|gb|ADC51903.1| phosphonate ABC transporter ATP-binding protein [Bacillus
          pseudofirmus OF4]
          Length = 244

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 11/72 (15%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
          MN G FI   G  GAGK+T I  + R ++           P         R ++     +
Sbjct: 26 MNKGEFICILGRSGAGKSTFIRCINRLIR-----------PTSGSIRFDGRELVGLREKE 74

Query: 61 EFGAEAEAIVFA 72
               AE ++  
Sbjct: 75 MREIRAEMVMIF 86


>gi|262170504|ref|ZP_06038182.1| adenylylsulfate kinase [Vibrio mimicus MB-451]
 gi|261891580|gb|EEY37566.1| adenylylsulfate kinase [Vibrio mimicus MB-451]
          Length = 208

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLT 109


>gi|257869497|ref|ZP_05649150.1| ABC transporter [Enterococcus gallinarum EG2]
 gi|257803661|gb|EEV32483.1| ABC transporter [Enterococcus gallinarum EG2]
          Length = 252

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 6  FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV 53
           I+F G  GAGK+T +S++ R L++   +V+   +E     + E A+++
Sbjct: 29 LIAFIGPNGAGKSTLLSIISRMLEQTTGEVYFKEKEIRQWRSKELAKNL 77


>gi|257439117|ref|ZP_05614872.1| signal recognition particle-docking protein FtsY [Faecalibacterium
           prausnitzii A2-165]
 gi|257198495|gb|EEU96779.1| signal recognition particle-docking protein FtsY [Faecalibacterium
           prausnitzii A2-165]
          Length = 312

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I+ L  F  R+   V +        AA     +             E   
Sbjct: 113 GVNGVGKTTSIAKLADFYTRQGKKVMLAAGDTFRAAASEQLEIWADRAGVPLVKAGE--- 169

Query: 71  FAAARLDHVENVIRPALMEGK-ILLCD 96
             A     + + ++ A   G  +++ D
Sbjct: 170 -GADPAAVIFDTVKSATARGYDLVIAD 195


>gi|296109055|ref|YP_003616004.1| PilT protein domain protein [Methanocaldococcus infernus ME]
 gi|295433869|gb|ADG13040.1| PilT protein domain protein [Methanocaldococcus infernus ME]
          Length = 631

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G+F++  G  G+GK+T ++ L  F +     V     P     ++  
Sbjct: 281 GIFVA--GPPGSGKSTFVTALAEFYKDMGKIVKTMESPRDLQVSKEI 325


>gi|237735347|ref|ZP_04565828.1| ABC transporter [Mollicutes bacterium D7]
 gi|229381092|gb|EEO31183.1| ABC transporter [Coprobacillus sp. D7]
          Length = 592

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
            SG  ++  G  GAGKTT I+LL RF   K   + +     G    +  R  L S
Sbjct: 376 KSGQMVAIVGPTGAGKTTIINLLLRFYDVKGGSIKI----DGVDIRDLPREELRS 426


>gi|254443138|ref|ZP_05056614.1| TrwC relaxase family [Verrucomicrobiae bacterium DG1235]
 gi|198257446|gb|EDY81754.1| TrwC relaxase family [Verrucomicrobiae bacterium DG1235]
          Length = 931

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G  G+GKTT I  +++ L    + V  
Sbjct: 420 GPAGSGKTTLIQEVQKGLNEAGHKVRF 446


>gi|209552151|ref|YP_002284067.1| adenylate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209539744|gb|ACI59675.1| adenylate kinase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 192

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 58/211 (27%), Gaps = 39/211 (18%)

Query: 11  GIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFG 63
           G  GAGK T    L       Q    D+       G+P   AA+ V+    L        
Sbjct: 7   GPPGAGKGTQARKLSAHFNVPQLSTGDMLRAAVSSGSPVGLAAKSVIDSGGLVGDKIVID 66

Query: 64  AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
              E +    AR   + +     + + K       LDS     G    S    ++ L   
Sbjct: 67  CVQERLSHDDARRGFILDGFPRTVAQAK------SLDSML---GPGKRSLSTVIELL--- 114

Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182
                         +  ++  +R++ R     +         ++    KR   + +    
Sbjct: 115 --------------VDEELLAQRIERRAGEAIANGETPRSDDNIETMRKRLAAYRESTEV 160

Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNIV 208
                    R   +D       V  +I   +
Sbjct: 161 LSNFYYNQGRLVRIDGMRDVDQVTADIFEAL 191


>gi|218961803|ref|YP_001741578.1| ABC-type multidrug/protein/lipid transport system, ATPase component
           [Candidatus Cloacamonas acidaminovorans]
 gi|167730460|emb|CAO81372.1| ABC-type multidrug/protein/lipid transport system, ATPase component
           [Candidatus Cloacamonas acidaminovorans]
          Length = 583

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 14/101 (13%)

Query: 11  GIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA- 68
           G  G GKTT I LL R +   +N       E    P     R ++L        +E+ A 
Sbjct: 370 GPTGCGKTTLIELLVRIYNPPRNSIYVDDYELYTIPLNVLRRDIVLVPQDIFLFSESIAD 429

Query: 69  ------------IVFAAARLDHVENVIRPALMEGKILLCDR 97
                        VF AAR+  V + I     + + ++ +R
Sbjct: 430 NIRLGNPEASDEEVFEAARIAQVYDEIMEFEQKFETVVGER 470


>gi|163802629|ref|ZP_02196520.1| adenylylsulfate kinase [Vibrio sp. AND4]
 gi|159173517|gb|EDP58337.1| adenylylsulfate kinase [Vibrio sp. AND4]
          Length = 205

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 28/115 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L +  Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENSLAQLGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
                 R +++     + +     G I+L         A+     + + L  D L
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLS--------AFISPHRAERQLVRDLL 126


>gi|160872800|ref|ZP_02062932.1| signal recognition particle-docking protein FtsY [Rickettsiella
           grylli]
 gi|159121599|gb|EDP46937.1| signal recognition particle-docking protein FtsY [Rickettsiella
           grylli]
          Length = 329

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           +  + I   G+ G GKTT I  L  +L+++   V +
Sbjct: 114 HKPMVILVVGVNGVGKTTSIGKLAYYLKKQGKKVML 149


>gi|45440812|ref|NP_992351.1| multidrug ABC transporter ATPase [Yersinia pestis biovar Microtus
          str. 91001]
 gi|108807088|ref|YP_651004.1| ATPase [Yersinia pestis Antiqua]
 gi|166211769|ref|ZP_02237804.1| ABC transporter, ATP-binding protein [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|167400161|ref|ZP_02305674.1| ABC transporter, ATP-binding protein [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167424230|ref|ZP_02315983.1| ABC transporter, ATP-binding protein [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|229894065|ref|ZP_04509251.1| ABC transporter multidrug efflux pump, fused ATP-binding domains
          [Yersinia pestis Pestoides A]
 gi|294503183|ref|YP_003567245.1| ABC-type multidrug transport system, ATPase component [Yersinia
          pestis Z176003]
 gi|45435670|gb|AAS61228.1| ABC-type multidrug transport system, ATPase component [Yersinia
          pestis biovar Microtus str. 91001]
 gi|108779001|gb|ABG13059.1| ATPase [Yersinia pestis Antiqua]
 gi|166207540|gb|EDR52020.1| ABC transporter, ATP-binding protein [Yersinia pestis biovar
          Antiqua str. B42003004]
 gi|167050110|gb|EDR61518.1| ABC transporter, ATP-binding protein [Yersinia pestis biovar
          Antiqua str. UG05-0454]
 gi|167057079|gb|EDR66842.1| ABC transporter, ATP-binding protein [Yersinia pestis biovar
          Mediaevalis str. K1973002]
 gi|229703950|gb|EEO90963.1| ABC transporter multidrug efflux pump, fused ATP-binding domains
          [Yersinia pestis Pestoides A]
 gi|262361220|gb|ACY57941.1| ABC-type multidrug transport system, ATPase component [Yersinia
          pestis D106004]
 gi|294353642|gb|ADE63983.1| ABC-type multidrug transport system, ATPase component [Yersinia
          pestis Z176003]
          Length = 580

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|54026131|ref|YP_120373.1| putative signal recognition particle protein [Nocardia farcinica
           IFM 10152]
 gi|54017639|dbj|BAD59009.1| putative signal recognition particle protein [Nocardia farcinica
           IFM 10152]
          Length = 520

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 22/139 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60
           G++GAGKTT    L ++L+ + +   +       P A     V+             G  
Sbjct: 107 GLQGAGKTTLAGKLAKYLKGQGHQPLLVACDLQRPGAVTQLQVVGERAGVPVFAPHPGTS 166

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDS 119
             G E    + AA  ++     +  A  +   I++ D            R       +  
Sbjct: 167 VGGGENPLGITAADPVEVARGGVAEARNKQYDIVIVD---------TAGRLGIDEELMRQ 217

Query: 120 LQEISVQEVMPDCTII-LD 137
              I    V PD T+  LD
Sbjct: 218 AASI-RDAVQPDETLFVLD 235


>gi|38233786|ref|NP_939553.1| cytidylate kinase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200047|emb|CAE49723.1| cytidylate kinase [Corynebacterium diphtheriae]
          Length = 241

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34
           GL ++ +G  GAGK+T    +   L  K  D
Sbjct: 15 GGLIVAVDGPSGAGKSTVCRRIASMLGAKYLD 46


>gi|26554311|ref|NP_758245.1| spermidine/putrescine transport ATP-binding protein PotA
          [Mycoplasma penetrans HF-2]
 gi|81846186|sp|Q8EUR3|POTA_MYCPE RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|26454320|dbj|BAC44649.1| spermidine/putrescine transport ATP-binding protein PotA
          [Mycoplasma penetrans HF-2]
          Length = 594

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G F++  G  G GKTT + ++
Sbjct: 47 IKKGEFVTILGPSGCGKTTILKMI 70


>gi|16082103|ref|NP_394537.1| signal recognition particle protein [Thermoplasma acidophilum DSM
           1728]
 gi|10640391|emb|CAC12205.1| probable signal recognition particle protein [Thermoplasma
           acidophilum]
          Length = 288

 Score = 35.4 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 54/177 (30%), Gaps = 49/177 (27%)

Query: 2   NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           N   F+  F GI G GKTT I     +L+R    V +      T  A A   + L     
Sbjct: 83  NKKPFVVLFLGINGTGKTTTIGKFAHYLKRNGKSVVIAA--ADTFRAGAIEQISLIGREA 140

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAY----QGERDSSQHL 115
                                VIR           DR  D SS A+         +  ++
Sbjct: 141 G------------------TEVIRH----------DRGSDPSSVAFDAIEHARARNIDYV 172

Query: 116 FLDSLQEISVQEV------------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
            +D+   ++  +              PD T+++ +    G   V       E+   D
Sbjct: 173 LIDTAGRMNTNKNLLDEMKKIKRVSKPDLTLLV-IDAVSGQDSVNQARMFEENVGYD 228


>gi|320354354|ref|YP_004195693.1| adenylylsulfate kinase [Desulfobulbus propionicus DSM 2032]
 gi|320122856|gb|ADW18402.1| adenylylsulfate kinase [Desulfobulbus propionicus DSM 2032]
          Length = 222

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  I   G+  +GK+T  + L   L +      V           A + +L     D+
Sbjct: 25  HKGCVIWLTGLSASGKSTIANTLDHKLHQAGIHSTVLDGDNVRHGLNATKQLLRETHGDD 84

Query: 62  FGAEAEAIVFAAARLDHVENV 82
           F         A  R +++  +
Sbjct: 85  FAQRFGLGFSAIDREENIRRI 105


>gi|319940796|ref|ZP_08015135.1| hypothetical protein HMPREF9464_00354 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805678|gb|EFW02459.1| hypothetical protein HMPREF9464_00354 [Sutterella wadsworthensis
           3_1_45B]
          Length = 231

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 6/87 (6%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F+   G  G+GK+T + LL   ++  + +V V          E  R  L        
Sbjct: 34  RGEFVLLRGPTGSGKSTVLKLLAGLVRPTSGEVIVA-GDRVDHFNEMERRWLRRSMGLMM 92

Query: 63  GAEAEAIVFAAARLDHVENVIRPALME 89
                       R  H ENV+ PAL  
Sbjct: 93  QDGRLLD----DRTVH-ENVMLPALAA 114


>gi|315038612|ref|YP_004032180.1| signal recognition particle GTPase [Lactobacillus amylovorus GRL
           1112]
 gi|312276745|gb|ADQ59385.1| signal recognition particle GTPase [Lactobacillus amylovorus GRL
           1112]
          Length = 439

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I  L +  + +   V +
Sbjct: 242 GVNGAGKTTTIGKLAKRFKDEGKSVIL 268


>gi|311068116|ref|YP_003973039.1| signal recognition particle-docking protein FtsY [Bacillus
           atrophaeus 1942]
 gi|310868633|gb|ADP32108.1| signal recognition particle-docking protein FtsY [Bacillus
           atrophaeus 1942]
          Length = 329

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ G GKTT I  L   L+ +   V +    G T  A A   +
Sbjct: 127 GVNGVGKTTTIGKLAHKLKEEGKSVVLAA--GDTFRAGAIEQL 167


>gi|308176915|ref|YP_003916321.1| polyphosphate kinase domain-containing protein [Arthrobacter
           arilaitensis Re117]
 gi|307744378|emb|CBT75350.1| polyphosphate kinase domain-containing protein [Arthrobacter
           arilaitensis Re117]
          Length = 298

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 33/117 (28%), Gaps = 31/117 (26%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I FEG + AGK   I      L  +   V    +P    + +                  
Sbjct: 80  IVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPSERESTQW----------------- 122

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
                      + +  ++     G+I+L DR   S Y   G   +      + +   
Sbjct: 123 -----------YYQRYVQHFPSAGEIVLFDR---SWYNRAGVERAMGFCTQEQVAHF 165


>gi|301169960|emb|CBW29564.1| cytidylate kinase [Haemophilus influenzae 10810]
          Length = 225

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 2  GMIITVDGPSGAGKGTLCYALAEKL 26


>gi|294084761|ref|YP_003551519.1| trehalose/maltose ABC transporter nucleotide binding/ATPase
          protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292664334|gb|ADE39435.1| ABC transporter, nucleotide binding/ATPase protein,
          trehalose/maltose [Candidatus Puniceispirillum marinum
          IMCC1322]
          Length = 350

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          + SG F+ F G  G GK+T + ++ 
Sbjct: 32 IKSGEFVVFVGPSGCGKSTLLRMIA 56


>gi|282882061|ref|ZP_06290702.1| cytidylate kinase [Peptoniphilus lacrimalis 315-B]
 gi|281298091|gb|EFA90546.1| cytidylate kinase [Peptoniphilus lacrimalis 315-B]
          Length = 207

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQ 29
          I+ +G  G+GK+T    +   L 
Sbjct: 3  IAIDGPAGSGKSTVAKKIAEKLN 25


>gi|270264287|ref|ZP_06192554.1| hypothetical protein SOD_g02240 [Serratia odorifera 4Rx13]
 gi|270041936|gb|EFA15033.1| hypothetical protein SOD_g02240 [Serratia odorifera 4Rx13]
          Length = 525

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L R  Q +   V +    G T  A A   + +    +     A+   
Sbjct: 328 GVNGVGKTTTIGKLARQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNRIPVVAQH-- 383

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             A     + + ++ A   G  +L         A    R  ++   ++ L++I 
Sbjct: 384 TGADSASVIYDAVQAAKARGIDVL--------LADTAGRLQNKAHLMEELKKIV 429


>gi|257870564|ref|ZP_05650217.1| signal recognition particle protein [Enterococcus gallinarum EG2]
 gi|257804728|gb|EEV33550.1| signal recognition particle protein [Enterococcus gallinarum EG2]
          Length = 433

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 1   MNSGL-FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
           M  GL  I F G+ G GKTT I  L    + +   V +      T  A A   +++  G
Sbjct: 222 MQPGLTVILFVGVNGVGKTTSIGKLAHQFKSEGKKVLLAA--ADTFRAGAIDQLVVWGG 278


>gi|261821422|ref|YP_003259528.1| putrescine/spermidine ABC transporter ATPase [Pectobacterium
          wasabiae WPP163]
 gi|261605435|gb|ACX87921.1| spermidine/putrescine ABC transporter ATPase subunit
          [Pectobacterium wasabiae WPP163]
          Length = 371

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + L+ 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLIA 57


>gi|254700997|ref|ZP_05162825.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella suis bv. 5 str. 513]
 gi|261751519|ref|ZP_05995228.1| sulfate adenylyltransferase [Brucella suis bv. 5 str. 513]
 gi|261741272|gb|EEY29198.1| sulfate adenylyltransferase [Brucella suis bv. 5 str. 513]
          Length = 644

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|253688249|ref|YP_003017439.1| spermidine/putrescine ABC transporter ATPase subunit
          [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754827|gb|ACT12903.1| spermidine/putrescine ABC transporter ATPase subunit
          [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 371

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N+G F++  G  G GKTT + L+ 
Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLIA 57


>gi|241762338|ref|ZP_04760418.1| Adenylyl-sulfate kinase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753409|ref|YP_003226302.1| adenylylsulfate kinase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|241373132|gb|EER62771.1| Adenylyl-sulfate kinase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552772|gb|ACV75718.1| adenylylsulfate kinase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 210

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 20/97 (20%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + GL + F G+ G+GK+T    L++ L  +N                     LL      
Sbjct: 35  HKGLVLWFTGLSGSGKSTVAGALEQVLHSRNVS-----------------SYLLDGDNIR 77

Query: 62  FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95
            G   +     A R +++     V +     G ++L 
Sbjct: 78  HGLCRDLGFSDADRKENIRRVGEVAKLMADAGLVVLT 114


>gi|240015691|ref|ZP_04722231.1| hypothetical protein NgonFA_00738 [Neisseria gonorrhoeae FA6140]
 gi|240079826|ref|ZP_04724369.1| hypothetical protein NgonF_00716 [Neisseria gonorrhoeae FA19]
 gi|240116982|ref|ZP_04731044.1| hypothetical protein NgonPID_00728 [Neisseria gonorrhoeae PID1]
 gi|268595972|ref|ZP_06130139.1| UDP-galactose-lipid carrier transferase [Neisseria gonorrhoeae
           FA19]
 gi|268602666|ref|ZP_06136833.1| pvdS [Neisseria gonorrhoeae PID1]
 gi|268549760|gb|EEZ44779.1| UDP-galactose-lipid carrier transferase [Neisseria gonorrhoeae
           FA19]
 gi|268586797|gb|EEZ51473.1| pvdS [Neisseria gonorrhoeae PID1]
          Length = 308

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
           FEG + AGK   I      L  +   V    +P  T   + 
Sbjct: 89  FEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPTDTERGQW 129


>gi|269127162|ref|YP_003300532.1| Shikimate kinase [Thermomonospora curvata DSM 43183]
 gi|268312120|gb|ACY98494.1| Shikimate kinase [Thermomonospora curvata DSM 43183]
          Length = 171

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
          G  G+GKTT    L   L     D     E     A +    + +  G + F A  E   
Sbjct: 10 GPPGSGKTTVGRALADRLGAAFRDTDADVEAT---AGKPISEIFIDDGEERFRAL-EREA 65

Query: 71 FAAARLDH 78
           AAA  +H
Sbjct: 66 VAAALAEH 73


>gi|237729732|ref|ZP_04560213.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Citrobacter sp. 30_2]
 gi|226908338|gb|EEH94256.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase
           [Citrobacter sp. 30_2]
          Length = 201

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T    L+  L +     +                 LL       G  ++ 
Sbjct: 33  FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
               A R +++     V    +  G ++L 
Sbjct: 76  GFSDADRKENIRRVGEVANLMVDAGLVVLT 105


>gi|194292771|ref|YP_002008678.1| molybdopterin-guanine dinucleotide biosynthesis protein b
          [Cupriavidus taiwanensis LMG 19424]
 gi|193226675|emb|CAQ72626.1| MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN B
          [Cupriavidus taiwanensis LMG 19424]
          Length = 186

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 6  FIS-FEGIEGAGKTTHISLLKRFLQRKNYDV 35
          FI    G  G+GKTT I+ L  + + +   V
Sbjct: 4  FILGITGTSGSGKTTLITALLPWFRAQGLTV 34


>gi|167754925|ref|ZP_02427052.1| hypothetical protein CLORAM_00429 [Clostridium ramosum DSM 1402]
 gi|167704975|gb|EDS19554.1| hypothetical protein CLORAM_00429 [Clostridium ramosum DSM 1402]
          Length = 592

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56
            SG  ++  G  GAGKTT I+LL RF   K   + +     G    +  R  L S
Sbjct: 376 KSGQMVAIVGPTGAGKTTIINLLLRFYDVKGGSIKI----DGVDIRDLPREELRS 426


>gi|156554837|ref|XP_001606441.1| PREDICTED: similar to l(3)70Da [Nasonia vitripennis]
          Length = 992

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36
           L IS  G  G+GKTT   LL+  L    Y VH
Sbjct: 461 LLIS--GTTGSGKTTVCKLLREILTASPYFVH 490


>gi|254285497|ref|ZP_04960461.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae AM-19226]
 gi|150424359|gb|EDN16296.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae AM-19226]
          Length = 279

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 46 GKFSVIVGPNGCGKSTLLKSLCRLLK 71


>gi|281357347|ref|ZP_06243836.1| guanylate kinase [Victivallis vadensis ATCC BAA-548]
 gi|281316378|gb|EFB00403.1| guanylate kinase [Victivallis vadensis ATCC BAA-548]
          Length = 205

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 67/201 (33%), Gaps = 34/201 (16%)

Query: 1   MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEA--ARHVLLS 56
           M+  G  I   G  G GK+T +S ++  +    + +   TR P      E     +  LS
Sbjct: 1   MSKYGTVIVLSGPSGVGKSTLVSRVRAAMPGLEFSISCTTRNP---RVGEQHGVHYYFLS 57

Query: 57  CGVDE----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112
               E         E     A R   +++ +   +  G+ ++ D         QG     
Sbjct: 58  REEFERRIGNDEFIEHAQVFANRYGTLKSEVLERIRRGRSVVLD------IDVQGAMKIR 111

Query: 113 QHLFLDSLQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFE--RKDV 167
                D   E++        T+ + +    V+   KR++ R +  E          + ++
Sbjct: 112 DAAARDP--ELAAH------TVWVFIGPPSVEALEKRLRGRATDSEEQIALRLGTAKHEL 163

Query: 168 MIHEK----RRQIFLDIARNQ 184
              +K         LDIA  +
Sbjct: 164 SFWKKYDYLVINDDLDIAAAE 184


>gi|149633127|ref|XP_001511666.1| PREDICTED: similar to PAPS synthase 1 [Ornithorhynchus anatinus]
          Length = 625

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+ +L            P  T   +  R  L       F  E     
Sbjct: 60  GLSGAGKTTVSMALEEYLVCHAI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R ++V  +   A +         F D+         S      ++ ++I     +P
Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGANLP 153

Query: 131 DCTIILDLPVDIGLKR 146
              + +D P+ +  +R
Sbjct: 154 FFEVFVDAPLHVCEQR 169


>gi|145633321|ref|ZP_01789052.1| cytidylate kinase [Haemophilus influenzae 3655]
 gi|144986167|gb|EDJ92757.1| cytidylate kinase [Haemophilus influenzae 3655]
          Length = 223

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 2  GMIITVDGPSGAGKGTLCYALAEKL 26


>gi|120613340|ref|YP_973018.1| adenylylsulfate kinase [Acidovorax citrulli AAC00-1]
 gi|120591804|gb|ABM35244.1| adenylylsulfate kinase [Acidovorax citrulli AAC00-1]
          Length = 196

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 47/154 (30%), Gaps = 31/154 (20%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ GAGKTT    L+  L        V          +  R  L S         AE+I 
Sbjct: 32  GLSGAGKTTLAHALETSLHHDGLRTFVL-------DGDRLRAGLSSDLGFTDADRAESI- 83

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130
               R  HV  +               F+D+         S       + Q +       
Sbjct: 84  ---RRAAHVARL---------------FVDAGMVAIVALISPFRAERAAAQALFAPG--- 122

Query: 131 DCT-IILDLPVDIGLKR-VQNRYSLRESACLDYF 162
           D   + +++P+ +  +R  +  Y    S  L  F
Sbjct: 123 DFVEVYVNVPLAVAEERDPKGLYRQARSGALPRF 156


>gi|91201020|emb|CAJ74078.1| strongly similar to signal recognition particle protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 450

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 27/156 (17%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-----EAARHVLLSCGVDEFGAE 65
           G++G+GKTT    L R +  K     +       PAA        R + +    ++    
Sbjct: 107 GLQGSGKTTTAGKLARLMLSKGKKPLLAAADIQRPAAVEQLKTLGRQLDIQVYFEKDLPP 166

Query: 66  AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
            +               I+ A   G  +++ D            R    +  +  L+EI 
Sbjct: 167 IKIC----------SEAIKYAKENGHDVVILD---------TAGRLHIDNELMLELREI- 206

Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
              + PD  I        G   V +     E    D
Sbjct: 207 KDTLTPD-QIYFVCDAMTGQDAVNSAREFDEQLGFD 241


>gi|57640888|ref|YP_183366.1| ATPase [Thermococcus kodakarensis KOD1]
 gi|57159212|dbj|BAD85142.1| predicted ATPase, AAA superfamily, containing PIN and KH nucleic
           acid-binding domains [Thermococcus kodakarensis KOD1]
          Length = 602

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           +G+ I+  G  G GKTT    L  +       V    +P     +E  
Sbjct: 259 AGILIA--GAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQVSEEI 304


>gi|297581181|ref|ZP_06943105.1| vibriobactin and enterobactin ABC transporter [Vibrio cholerae
          RC385]
 gi|297534497|gb|EFH73334.1| vibriobactin and enterobactin ABC transporter [Vibrio cholerae
          RC385]
          Length = 279

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 46 GKFSVIVGPNGCGKSTLLKSLCRLLK 71


>gi|148825814|ref|YP_001290567.1| cytidylate kinase [Haemophilus influenzae PittEE]
 gi|229846878|ref|ZP_04466985.1| cytidylate kinase [Haemophilus influenzae 7P49H1]
 gi|148715974|gb|ABQ98184.1| cytidylate kinase [Haemophilus influenzae PittEE]
 gi|229810367|gb|EEP46086.1| cytidylate kinase [Haemophilus influenzae 7P49H1]
 gi|309972957|gb|ADO96158.1| Cytidylate kinase 1 [Haemophilus influenzae R2846]
          Length = 223

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 2  GMIITVDGPSGAGKGTLCYALAEKL 26


>gi|325571112|ref|ZP_08146684.1| ferrichrome ABC superfamily ATP binding cassette transporter, ABC
          protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156197|gb|EGC68383.1| ferrichrome ABC superfamily ATP binding cassette transporter, ABC
          protein [Enterococcus casseliflavus ATCC 12755]
          Length = 263

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL 55
          G  I   G  G+GK+T +  L R LQ  + +V + T+        E A+ + L
Sbjct: 29 GKIIGLIGPNGSGKSTFLKALARILQPLSGEVLLDTQNLQNIKTKEVAKKIAL 81


>gi|317124844|ref|YP_004098956.1| ABC transporter [Intrasporangium calvum DSM 43043]
 gi|315588932|gb|ADU48229.1| ABC transporter related protein [Intrasporangium calvum DSM 43043]
          Length = 638

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 56/175 (32%), Gaps = 53/175 (30%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSCGVD 60
           G  I+  G  GAGKTT  SL+ R             +P            R + LS    
Sbjct: 404 GQLIALVGPSGAGKTTLTSLVSRL-----------YDPTSGAVRIGGLDLRDITLSSLRS 452

Query: 61  EFGAEA-EAIVF--------AAARLDHVENVIRPALMEGKI-------------LLCDRF 98
             G    EA +F          AR +  E  +   L   +I             ++ DR 
Sbjct: 453 RVGVVTQEAHLFHDTIRANLLYARPEATEQEMALVLRSAQISDLVDDLPEGLDTVVGDR- 511

Query: 99  LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTII------LDLPVDIGLKRV 147
                   G R S       ++  + ++   PD  ++      LD   ++ ++R 
Sbjct: 512 --------GHRLSGGEKQRLAIARLLLKA--PDIVVLDEATAHLDSESEVAVQRA 556


>gi|313680292|ref|YP_004058031.1| excinuclease ABC subunit a [Oceanithermus profundus DSM 14977]
 gi|313153007|gb|ADR36858.1| Excinuclease ABC subunit A [Oceanithermus profundus DSM 14977]
          Length = 955

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 3  SGLFISFEGIEGAGKTTHI 21
           G FI   G+ G+GK+T  
Sbjct: 23 RGKFIVITGVSGSGKSTLA 41


>gi|312880139|ref|ZP_07739939.1| LAO/AO transport system ATPase [Aminomonas paucivorans DSM 12260]
 gi|310783430|gb|EFQ23828.1| LAO/AO transport system ATPase [Aminomonas paucivorans DSM 12260]
          Length = 314

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 10/103 (9%)

Query: 2   NSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58
           +SG    I   G  GAGK+T +  L R  ++    V  +  +P    +  A     L   
Sbjct: 40  HSGKAQIIGITGSPGAGKSTLVDKLIRRFKKDGKQVGIIAVDPSSPFSGGAILGDRLRMQ 99

Query: 59  VDEFGAE-------AEAIVFAAARLDHVENVIRPALMEGKILL 94
                 +           +   +R  H   +I  A  +  IL+
Sbjct: 100 DHALDPDVFIRSMGTRGSLGGVSRATHEAALILDACGKDVILI 142


>gi|311109725|ref|YP_003982577.1| ATP-binding domain-containing protein [Achromobacter xylosoxidans
           A8]
 gi|310764414|gb|ADP19862.1| ATP-binding domain protein [Achromobacter xylosoxidans A8]
          Length = 251

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 6/94 (6%)

Query: 11  GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGA 64
           G  GAGKTT I+ L   L       V+  ++    P  + AR  +L         +EF  
Sbjct: 38  GPNGAGKTTLINQLSGELWSDAGDVVYAGQKITALPIYDRARRGVLRSYQITSIFEEFTV 97

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98
               ++ A     H     RP L    ++   R 
Sbjct: 98  LENTVLAAMGAKSHAYYFWRPMLGRADLVKAARH 131


>gi|311111951|ref|YP_003983173.1| adenylate kinase [Rothia dentocariosa ATCC 17931]
 gi|310943445|gb|ADP39739.1| adenylate kinase [Rothia dentocariosa ATCC 17931]
          Length = 187

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 80/217 (36%), Gaps = 40/217 (18%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           MN  L I   G  GAGK T    +   L+        T         +  R  +      
Sbjct: 1   MNRLLII---GPPGAGKGTQAVKIAEELK---IPAIST--------GDIFRKNIK--EET 44

Query: 61  EFGAEAEAIVFAAARL-DHV-ENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHL 115
           E G EA++ + +   + D V  N++R  L E  +    L D +          R+ +Q  
Sbjct: 45  ELGKEAKSYIDSGNLVPDSVTNNMVRARLDEADVAHGFLLDGY---------PRNIAQVH 95

Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE-KRR 174
            LD++  ++ +    D  ++L    D  + R+ NR +  E    D  + ++V+ H  K  
Sbjct: 96  ELDAI--LADKNQQIDRVLLLVADDDELVARLLNRAA--EQGRTD--DNEEVIRHRLKVY 149

Query: 175 QIFLD-IARNQPDRCHI--VDSAHSFQSVATNILNIV 208
           +     +     +R  +  VD       V   IL  +
Sbjct: 150 EEETAPLVAKYRERGIVKEVDGLGEIADVTERILKAL 186


>gi|294851592|ref|ZP_06792265.1| cysN [Brucella sp. NVSL 07-0026]
 gi|294820181|gb|EFG37180.1| cysN [Brucella sp. NVSL 07-0026]
          Length = 644

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|284048966|ref|YP_003399305.1| ABC transporter related protein [Acidaminococcus fermentans DSM
          20731]
 gi|283953187|gb|ADB47990.1| ABC transporter related protein [Acidaminococcus fermentans DSM
          20731]
          Length = 264

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M  G FI+  G  GAGK+T ++ + 
Sbjct: 29 MEPGDFITIIGGNGAGKSTLLNSIA 53


>gi|260550345|ref|ZP_05824557.1| signal recognition particle GTPase [Acinetobacter sp. RUH2624]
 gi|260406657|gb|EEX00138.1| signal recognition particle GTPase [Acinetobacter sp. RUH2624]
          Length = 368

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 171 GVNGVGKTTTIGKLAKRLQGEGKKVMLAA--GDTFRAAATEQLQIWGERNDIAVVAQG-- 226

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 227 HGADSASVIFDAFESARAKGIDVLIAD 253


>gi|256368657|ref|YP_003106163.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella microti CCM 4915]
 gi|255998815|gb|ACU47214.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella microti CCM 4915]
          Length = 644

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|253687795|ref|YP_003016985.1| ABC transporter related [Pectobacterium carotovorum subsp.
          carotovorum PC1]
 gi|251754373|gb|ACT12449.1| ABC transporter related [Pectobacterium carotovorum subsp.
          carotovorum PC1]
          Length = 267

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46
           G F+   G  G GK+T ++++  F       V    EP   P 
Sbjct: 40 KGEFVVLLGPSGCGKSTILNMIAGFEAADKGRVLCGDEPVRRPG 83


>gi|237785214|ref|YP_002905919.1| hypothetical protein ckrop_0613 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758126|gb|ACR17376.1| hypothetical protein ckrop_0613 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 239

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 5/45 (11%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAAR 51
            +G+ G+GKTT    L          V    E  PG +   EA+R
Sbjct: 60  IDGLSGSGKTTLAKYLAEM---TGARVIHCDEFYPGWSGLMEASR 101


>gi|237730467|ref|ZP_04560948.1| hemin importer ATP-binding subunit [Citrobacter sp. 30_2]
 gi|226906006|gb|EEH91924.1| hemin importer ATP-binding subunit [Citrobacter sp. 30_2]
          Length = 256

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAAR 51
          G  I+  G  GAGK+T +  L  +LQ          +     P  E A+
Sbjct: 27 GEIIAILGPNGAGKSTLLRQLTGYLQPHSGRCSLFGKPLNEWPITELAK 75


>gi|225568126|ref|ZP_03777151.1| hypothetical protein CLOHYLEM_04199 [Clostridium hylemonae DSM
          15053]
 gi|225163079|gb|EEG75698.1| hypothetical protein CLOHYLEM_04199 [Clostridium hylemonae DSM
          15053]
          Length = 255

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          MN G F++  G  G GK+T +S++   ++
Sbjct: 31 MNKGEFVAIVGPSGCGKSTLLSIISGLIE 59


>gi|195493214|ref|XP_002094321.1| GE21760 [Drosophila yakuba]
 gi|194180422|gb|EDW94033.1| GE21760 [Drosophila yakuba]
          Length = 236

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 36/196 (18%)

Query: 11  GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G  G+GK+T +  L   F     + + H TR+P          + +    ++E  A  E 
Sbjct: 45  GPSGSGKSTLLKRLFAEFPNTFGFSISHTTRKPRAGEEHGVHYYFVERPEMEEAIAGDEF 104

Query: 69  IVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
           I  A    +     +  +R    +G++ + D                +   ++ ++   +
Sbjct: 105 IETAEFTGNLYGTSKAAVREIQAQGRVCILD---------------IEQKGVEQIRRTDL 149

Query: 126 QEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM---------IHEKRR 174
             +     +I + P   +   +R++ R S  E +         V           H+   
Sbjct: 150 NPI-----LIFNNPPSIEELERRLRQRGSETEESLSKRLNAAQVELDYGLTPGNFHKIIN 204

Query: 175 QIFLDIARNQPDRCHI 190
            + +D+A  +     +
Sbjct: 205 NVDIDVAYEEFRNFVV 220


>gi|170691564|ref|ZP_02882729.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia graminis C4D1M]
 gi|170143769|gb|EDT11932.1| spermidine/putrescine ABC transporter ATPase subunit
          [Burkholderia graminis C4D1M]
          Length = 356

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK 25
           G F++F G  G GKTT + ++ 
Sbjct: 28 RGEFVTFLGPSGCGKTTVLRMIA 50


>gi|125623216|ref|YP_001031699.1| ferrichrome ABC transporter fhuC [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124492024|emb|CAL96951.1| ferrichrome ABC transporter fhuC [Lactococcus lactis subsp.
           cremoris MG1363]
          Length = 259

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFGAEAEA 68
           G+ G+GK+T +  L R ++ +   V    +P    +      +  LL   +         
Sbjct: 35  GVNGSGKSTILKALGRLIKAEGQ-VIFDNQPLSNHSNREIARILALLPQSITAPADITVY 93

Query: 69  IVFAAARLDHVE 80
            + +  R  H +
Sbjct: 94  ELVSLGRFPHQK 105


>gi|153215203|ref|ZP_01949884.1| adenylylsulfate kinase [Vibrio cholerae 1587]
 gi|153801113|ref|ZP_01955699.1| adenylylsulfate kinase [Vibrio cholerae MZO-3]
 gi|153825796|ref|ZP_01978463.1| adenylylsulfate kinase [Vibrio cholerae MZO-2]
 gi|229527512|ref|ZP_04416904.1| adenylylsulfate kinase [Vibrio cholerae 12129(1)]
 gi|254291471|ref|ZP_04962263.1| adenylylsulfate kinase [Vibrio cholerae AM-19226]
 gi|124114848|gb|EAY33668.1| adenylylsulfate kinase [Vibrio cholerae 1587]
 gi|124123346|gb|EAY42089.1| adenylylsulfate kinase [Vibrio cholerae MZO-3]
 gi|149740519|gb|EDM54634.1| adenylylsulfate kinase [Vibrio cholerae MZO-2]
 gi|150422661|gb|EDN14616.1| adenylylsulfate kinase [Vibrio cholerae AM-19226]
 gi|229335144|gb|EEO00629.1| adenylylsulfate kinase [Vibrio cholerae 12129(1)]
          Length = 215

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 44  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 87  GFSEQDRRENIRRIGELAKLMADAGLIVLT 116


>gi|170731407|ref|YP_001763354.1| ABC transporter-like protein [Burkholderia cenocepacia MC0-3]
 gi|169814649|gb|ACA89232.1| ABC transporter related [Burkholderia cenocepacia MC0-3]
          Length = 265

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G FI+  G  G GK+T ++L+   L+  + +V V   P
Sbjct: 41 RGEFIAIVGPTGCGKSTTLNLITGLLKPASGEVRVMGRP 79


>gi|30909072|gb|AAP37397.1| MesD [Leuconostoc mesenteroides subsp. mesenteroides]
          Length = 722

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           I+  GI G+GK+T + LL  F + +   + + + P         R  +
Sbjct: 518 IALVGISGSGKSTLVKLLVNFFEPETGKILLGQTPLDNINKHDLRAYI 565


>gi|78067608|ref|YP_370377.1| signal recognition particle-docking protein FtsY [Burkholderia sp.
           383]
 gi|77968353|gb|ABB09733.1| signal recognition particle-docking protein FtsY [Burkholderia sp.
           383]
          Length = 388

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           + I+  G+ GAGKTT I  L + LQ  +  V +
Sbjct: 191 MMIT--GVNGAGKTTSIGKLAKHLQSFDQSVLL 221


>gi|72161712|ref|YP_289369.1| ABC-type spermidine/putrescine transport systems ATPase components
           [Thermobifida fusca YX]
 gi|71915444|gb|AAZ55346.1| ABC-type spermidine/putrescine transport systems ATPase components
           [Thermobifida fusca YX]
          Length = 385

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 23/80 (28%), Gaps = 11/80 (13%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDV----HVTREPGGTPAAEA 49
           M  G F    G  G GKTT +  L          +      V      T EP   P    
Sbjct: 49  MPKGDFCVLLGPSGCGKTTLLRCLAGLEHPDEGSITIDGQPVFGPGIRTVEPQDRPVGMV 108

Query: 50  ARHVLLSCGVDEFGAEAEAI 69
            ++  L   +      A  +
Sbjct: 109 FQNYALWPNMTVADNVAFPL 128


>gi|15889926|ref|NP_355607.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157881|gb|AAK88392.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
          Length = 264

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 4   GLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCG 58
           G F++  G  GAGK+T + +L    L      +     VTR+P  + A   AR V     
Sbjct: 32  GSFVTVIGSNGAGKSTLLGVLAGDVLPTAGKVMIGGADVTRKPTASRAGRVAR-VFQDPL 90

Query: 59  VDEFGAEA--EAIVFAAARLDHVENVIRPALMEGK 91
               GA    E +  AA+R +     +  AL  G+
Sbjct: 91  AGSCGALTIEENLALAASRGE--RRGLSSALGRGR 123


>gi|19746096|ref|NP_607232.1| putative ABC transporter ATP-binding protein [Streptococcus
           pyogenes MGAS8232]
 gi|19748268|gb|AAL97731.1| putative ABC transporter (ATP-binding protein) [Streptococcus
           pyogenes MGAS8232]
          Length = 575

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           ++  G  GAGK+T I+LL RF +     + + + P    A E  R +
Sbjct: 369 VAIVGPTGAGKSTLINLLMRFYELDADSIKLDKVPIKCYAKEELRSI 415


>gi|81428974|ref|YP_395974.1| spermidine/putrescine ABC transporter ATP-binding protein
          [Lactobacillus sakei subsp. sakei 23K]
 gi|123728634|sp|Q38VW6|POTA_LACSS RecName: Full=Spermidine/putrescine import ATP-binding protein
          PotA
 gi|78610616|emb|CAI55667.1| Spermidine/putrescine ABC transporter, ATP-binding subunit
          [Lactobacillus sakei subsp. sakei 23K]
          Length = 363

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G GKTT + ++  F    + DV  
Sbjct: 30 KGKFYTLLGPSGCGKTTILRIIAGFTNASSGDVLF 64


>gi|62289168|ref|YP_220961.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella abortus bv. 1 str. 9-941]
 gi|82699108|ref|YP_413682.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella melitensis biovar Abortus 2308]
 gi|189023443|ref|YP_001934211.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella abortus S19]
 gi|237814660|ref|ZP_04593658.1| sulfate adenylyltransferase, large subunit [Brucella abortus str.
           2308 A]
 gi|254694983|ref|ZP_05156811.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella abortus bv. 3 str. Tulya]
 gi|254696615|ref|ZP_05158443.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731528|ref|ZP_05190106.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella abortus bv. 4 str. 292]
 gi|256258751|ref|ZP_05464287.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella abortus bv. 9 str. C68]
 gi|260546465|ref|ZP_05822205.1| sulfate adenylyltransferase [Brucella abortus NCTC 8038]
 gi|260759274|ref|ZP_05871622.1| sulfate adenylyltransferase [Brucella abortus bv. 4 str. 292]
 gi|260760996|ref|ZP_05873339.1| sulfate adenylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260885071|ref|ZP_05896685.1| sulfate adenylyltransferase [Brucella abortus bv. 9 str. C68]
 gi|261215326|ref|ZP_05929607.1| sulfate adenylyltransferase [Brucella abortus bv. 3 str. Tulya]
 gi|297247584|ref|ZP_06931302.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase [Brucella abortus bv. 5 str. B3196]
 gi|62195300|gb|AAX73600.1| CysNC, sulfate adenylate transferase, subunit 1/adenylylsulfate
           kinase [Brucella abortus bv. 1 str. 9-941]
 gi|82615209|emb|CAJ10150.1| Shikimate kinase:Uridine kinase:Elongation factor,
           GTP-binding:ATP/GTP-binding site motif A
           (P-loop):Adenylylsulfate kinase:E [Brucella melitensis
           biovar Abortus 2308]
 gi|189019015|gb|ACD71737.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella abortus S19]
 gi|237789497|gb|EEP63707.1| sulfate adenylyltransferase, large subunit [Brucella abortus str.
           2308 A]
 gi|260096572|gb|EEW80448.1| sulfate adenylyltransferase [Brucella abortus NCTC 8038]
 gi|260669592|gb|EEX56532.1| sulfate adenylyltransferase [Brucella abortus bv. 4 str. 292]
 gi|260671428|gb|EEX58249.1| sulfate adenylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260874599|gb|EEX81668.1| sulfate adenylyltransferase [Brucella abortus bv. 9 str. C68]
 gi|260916933|gb|EEX83794.1| sulfate adenylyltransferase [Brucella abortus bv. 3 str. Tulya]
 gi|297174753|gb|EFH34100.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase [Brucella abortus bv. 5 str. B3196]
          Length = 644

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|37524466|ref|NP_927810.1| maltose/maltodextrin transporter ATP-binding protein
          [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|67468262|sp|Q7N986|MALK_PHOLL RecName: Full=Maltose/maltodextrin import ATP-binding protein
          MalK
 gi|36783890|emb|CAE12752.1| Maltose/maltodextrin transport ATP-binding protein MalK
          [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 369

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 4  GLFISFEGIEGAGKTTHISLLK 25
          G FI F G  G GK+T + ++ 
Sbjct: 29 GEFIVFVGPSGCGKSTILRMIA 50


>gi|154243881|ref|YP_001409454.1| LAO/AO transport system ATPase [Xanthobacter autotrophicus Py2]
 gi|154163003|gb|ABS70218.1| LAO/AO transport system ATPase [Xanthobacter autotrophicus Py2]
          Length = 332

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAAR 51
           I   G+ G+GK+T ++   + L+ +   V  V  +P     GG+   +  R
Sbjct: 54  IGITGVPGSGKSTLVARFAQMLRARGSKVGIVAVDPSSPFSGGSILGDRVR 104


>gi|117928349|ref|YP_872900.1| ABC transporter related [Acidothermus cellulolyticus 11B]
 gi|117648812|gb|ABK52914.1| ABC transporter related protein [Acidothermus cellulolyticus 11B]
          Length = 648

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 55/170 (32%), Gaps = 43/170 (25%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRF-------------------LQRKNYDVHVTREPGGT 44
           G  ++  G  GAGKTT  SL+ R                    L      V V  +    
Sbjct: 415 GQLVALVGPSGAGKTTIASLVPRLYDVTSGAVRVGGIDVRNVTLASLRRVVGVVTQDSHL 474

Query: 45  PAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSY 103
              +  R  LL           EA +  A +   + +++  +L +G   ++ DR      
Sbjct: 475 FH-DTIRANLLYANPHA----TEAELIDACKAAQIWDLVS-SLKDGLDTVVGDR------ 522

Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTII------LDLPVDIGLKRV 147
            Y+      Q L +  L         P   ++      LD   ++ ++R 
Sbjct: 523 GYRLSGGEKQRLAIARL-----LLKKPSIVVLDEATAHLDSESEVAVQRA 567


>gi|107021599|ref|YP_619926.1| ABC transporter related [Burkholderia cenocepacia AU 1054]
 gi|116688057|ref|YP_833680.1| ABC transporter related [Burkholderia cenocepacia HI2424]
 gi|254246634|ref|ZP_04939955.1| ABC transporter [Burkholderia cenocepacia PC184]
 gi|105891788|gb|ABF74953.1| ABC transporter related protein [Burkholderia cenocepacia AU
          1054]
 gi|116646146|gb|ABK06787.1| ABC transporter related protein [Burkholderia cenocepacia HI2424]
 gi|124871410|gb|EAY63126.1| ABC transporter [Burkholderia cenocepacia PC184]
          Length = 265

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G FI+  G  G GK+T ++L+   L+  + +V V   P
Sbjct: 41 RGEFIAIVGPTGCGKSTTLNLITGLLKPASGEVRVMGRP 79


>gi|94984933|ref|YP_604297.1| helicase RecD/TraA [Deinococcus geothermalis DSM 11300]
 gi|94555214|gb|ABF45128.1| Helicase RecD/TraA [Deinococcus geothermalis DSM 11300]
          Length = 726

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 5/49 (10%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
             +   G  G GK+T    +    +R   +V +       P  +AAR +
Sbjct: 365 RLVVLTGGPGTGKSTATRAVADLAERLGLEVGLC-----APTGKAARRL 408


>gi|134294166|ref|YP_001117901.1| ABC transporter-like protein [Burkholderia vietnamiensis G4]
 gi|134137323|gb|ABO53066.1| ABC transporter related protein [Burkholderia vietnamiensis G4]
          Length = 265

 Score = 35.4 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
           G FI+  G  G GK+T ++L+   L+  + +V V   P
Sbjct: 41 RGEFIAIVGPTGCGKSTTLNLITGLLKPASGEVRVMGRP 79


>gi|329850763|ref|ZP_08265608.1| ABC transporter family protein [Asticcacaulis biprosthecum C19]
 gi|328841078|gb|EGF90649.1| ABC transporter family protein [Asticcacaulis biprosthecum C19]
          Length = 253

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          +G      G  GAGKTT +  +   L+     V +
Sbjct: 28 AGKLYVVVGPNGAGKTTLLKAMASLLRLDGGKVTL 62


>gi|328957140|ref|YP_004374526.1| ABC transporter, ATP-binding protein [Carnobacterium sp. 17-4]
 gi|328673464|gb|AEB29510.1| ABC transporter, ATP-binding protein [Carnobacterium sp. 17-4]
          Length = 600

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           I+  G  GAGKTT ++LL RF +  + ++++     GTP +   R  L
Sbjct: 389 IAIVGPTGAGKTTLVNLLMRFYEVNSGEIYI----DGTPISSVTRGAL 432


>gi|330918207|ref|XP_003298135.1| hypothetical protein PTT_08742 [Pyrenophora teres f. teres 0-1]
 gi|311328849|gb|EFQ93765.1| hypothetical protein PTT_08742 [Pyrenophora teres f. teres 0-1]
          Length = 1269

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 2    NSGLFISFEGIEGAGKTTHISLLKRF 27
              G FI+F G  G GK+T I LL+RF
Sbjct: 1049 RPGQFIAFVGASGCGKSTMIQLLERF 1074


>gi|307720185|ref|YP_003891325.1| adenylylsulfate kinase [Sulfurimonas autotrophica DSM 16294]
 gi|306978278|gb|ADN08313.1| adenylylsulfate kinase [Sulfurimonas autotrophica DSM 16294]
          Length = 200

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 34/141 (24%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  + ++  L       +                 LL       G  A  
Sbjct: 31  FTGLSGSGKSTIANAVEVKLNEMGKHTY-----------------LLDGDNIRLGLNAGL 73

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125
                 R++++     V +  +  G I+L                S      + ++++  
Sbjct: 74  GFSEEERVENIRRIGEVSKLFVDAGMIVLS------------AFISPFKQEREKVRKLVK 121

Query: 126 QEVMPDCTIILDLPVDIGLKR 146
           +       + +D P+++   R
Sbjct: 122 KSEF--IEVFIDTPLEVCQSR 140


>gi|262166581|ref|ZP_06034318.1| adenylylsulfate kinase [Vibrio mimicus VM223]
 gi|262026297|gb|EEY44965.1| adenylylsulfate kinase [Vibrio mimicus VM223]
          Length = 208

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 37  FTGLSGAGKSTVAGALENRLAELGYHTY-----------------LLDGDNVRHGLCSDL 79

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 80  GFSEQDRRENIRRIGELAKLMADAGLIVLT 109


>gi|257468930|ref|ZP_05633024.1| ABC transporter, ATP-binding protein [Fusobacterium ulcerans ATCC
          49185]
 gi|317063178|ref|ZP_07927663.1| ABC transporter [Fusobacterium ulcerans ATCC 49185]
 gi|313688854|gb|EFS25689.1| ABC transporter [Fusobacterium ulcerans ATCC 49185]
          Length = 315

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
          +  G   S  G  GAGK+T I++L  +L     +V ++ +     + E  + +
Sbjct: 27 IKQGEIFSLLGPNGAGKSTLINILTTYLNYNGGEVKISGKDLRKESQEIRKEI 79


>gi|254821791|ref|ZP_05226792.1| ABC transporter ATP-binding protein [Mycobacterium intracellulare
          ATCC 13950]
          Length = 249

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 17/48 (35%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
            G  +   G  G GK+T +  L   L      V    +P  T + + 
Sbjct: 33 RPGEILVLTGPSGCGKSTVLRALAGLLLPDGGRVLADGDPVETTSGDR 80


>gi|240122620|ref|ZP_04735576.1| hypothetical protein NgonP_01511 [Neisseria gonorrhoeae PID332]
 gi|260441406|ref|ZP_05795222.1| hypothetical protein NgonDG_10050 [Neisseria gonorrhoeae DGI2]
 gi|268681216|ref|ZP_06148078.1| pvdS [Neisseria gonorrhoeae PID332]
 gi|291044763|ref|ZP_06570472.1| UDP-galactose-lipid carrier transferase [Neisseria gonorrhoeae
           DGI2]
 gi|268621500|gb|EEZ53900.1| pvdS [Neisseria gonorrhoeae PID332]
 gi|291011657|gb|EFE03653.1| UDP-galactose-lipid carrier transferase [Neisseria gonorrhoeae
           DGI2]
          Length = 309

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49
           FEG + AGK   I      L  +   V    +P  T   + 
Sbjct: 89  FEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPTDTERGQW 129


>gi|240047357|ref|YP_002960745.1| Cytidylate kinase [Mycoplasma conjunctivae HRC/581]
 gi|239984929|emb|CAT04922.1| Cytidylate kinase [Mycoplasma conjunctivae]
          Length = 223

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRF 27
          M   + I+ +G  GAGK+T   ++   
Sbjct: 1  MTKKINIAIDGPSGAGKSTIAKIIADK 27


>gi|240103994|ref|YP_002960303.1| GTPase [Thermococcus gammatolerans EJ3]
 gi|239911548|gb|ACS34439.1| ATP binding protein, XPA-binding protein 1-like protein
          [Thermococcus gammatolerans EJ3]
          Length = 249

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45
          + ++F G  G+GKTT      R+L+ + + V       G  
Sbjct: 1  MIVAFLGTAGSGKTTMAGSFGRYLEEQGHSVAYVNLDTGVR 41


>gi|229513481|ref|ZP_04402945.1| adenylylsulfate kinase [Vibrio cholerae TMA 21]
 gi|229349358|gb|EEO14314.1| adenylylsulfate kinase [Vibrio cholerae TMA 21]
          Length = 215

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 44  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 87  GFSEQDRRENIRRIGELAKLMADAGLIVLT 116


>gi|254518492|ref|ZP_05130548.1| ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA]
 gi|226912241|gb|EEH97442.1| ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA]
          Length = 255

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 46/137 (33%), Gaps = 11/137 (8%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
            G F+S  G  G GK+T ++++   L+  +  +    +       +              
Sbjct: 32  KGEFVSIIGPSGCGKSTLLNIISGLLKPSDGKIIYIDKDINNRLDKMGYMFQKDYLFKWL 91

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSL 120
              +  ++    +    E  I+ A       L D +  S +      E        +  +
Sbjct: 92  SVRSNVLLGLKIKGLDNEENIQRADK-----LLDNYQLSKFKNHKPAELSGGMRQRVALI 146

Query: 121 QEISVQEVMPDCTIILD 137
           + +++    PD  ++LD
Sbjct: 147 RTLALN---PD-VLLLD 159


>gi|222081224|ref|YP_002540587.1| ABC transporter [Agrobacterium radiobacter K84]
 gi|221725903|gb|ACM28992.1| ABC transporter [Agrobacterium radiobacter K84]
          Length = 369

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLK 25
            G FI+F G  G GKTT + ++ 
Sbjct: 29 TKGEFIAFLGPSGCGKTTTLRMIA 52


>gi|221633591|ref|YP_002522817.1| guanylate kinase [Thermomicrobium roseum DSM 5159]
 gi|221156753|gb|ACM05880.1| guanylate kinase [Thermomicrobium roseum DSM 5159]
          Length = 217

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 53/164 (32%), Gaps = 26/164 (15%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
             I   G  G GK T I  +++     ++ V  T  P      +   ++ ++        
Sbjct: 25  KLIVISGPSGVGKDTVIERMRQAHPEFHFAVTATTRPRRPGEIDGVHYIFMTREEFLAAR 84

Query: 65  EAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +    + +A    H+    +  +R AL  GK ++                        S+
Sbjct: 85  DRGEFLESAEVYGHLYGVPKERVRRALRSGKTVVV---------------KVDVQGAASI 129

Query: 121 QEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162
           + +      P   +I   P      + R+++R +   +  ++  
Sbjct: 130 RRLV-----PQAILIFLAPPSMSELMHRLRSRKTDDPTTLMERI 168


>gi|169335336|ref|ZP_02862529.1| hypothetical protein ANASTE_01748 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258074|gb|EDS72040.1| hypothetical protein ANASTE_01748 [Anaerofustis stercorihominis DSM
           17244]
          Length = 298

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           +     I F G+ GAGKTT I+ L     +++  V +
Sbjct: 95  IKKPALILFIGVNGAGKTTTIAKLANKFLKEDKKVIL 131


>gi|169630863|ref|YP_001704512.1| adenylate kinase [Mycobacterium abscessus ATCC 19977]
 gi|238688914|sp|B1MGB3|KAD_MYCA9 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP
           transphosphorylase
 gi|169242830|emb|CAM63858.1| Adenylate kinase [Mycobacterium abscessus]
          Length = 181

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 61/212 (28%), Gaps = 45/212 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60
           +   G  GAGK T   L+             T +        GT     A+  L      
Sbjct: 3   VVLLGPPGAGKGTQAQLISEKF---GIPQISTGDLFRSNISEGTELGLQAKQYL---DAG 56

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
           +            ARLD       P    G   + D F          R   Q   L ++
Sbjct: 57  DLVPSEVTNKMVEARLD------EPDAAAGF--ILDGF---------PRTVDQADALAAM 99

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179
           +E   + V  D  +   +PV+  ++R+  R    ++            I   R  ++ D 
Sbjct: 100 EE--ARGVTIDAVLEFRVPVEELVQRLLGRGRADDTE----------DIIRNRLNVYRDE 147

Query: 180 ---IARNQPDRCHIVDSAHSFQSVATNILNIV 208
              +     +    +D+  +   V       +
Sbjct: 148 TAPLLEYYQNVLQTIDAVGTVDEVFARTSQAL 179


>gi|153809502|ref|ZP_01962170.1| hypothetical protein BACCAC_03820 [Bacteroides caccae ATCC 43185]
 gi|149127883|gb|EDM19106.1| hypothetical protein BACCAC_03820 [Bacteroides caccae ATCC 43185]
          Length = 188

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 3  SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTP 45
          +G  I F    G+GK+T I+ LL + L         +R P GT 
Sbjct: 2  TGKLIIFSAPSGSGKSTIINYLLTQHLNLAFSISATSRPPRGTE 45


>gi|148559962|ref|YP_001258223.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella ovis ATCC 25840]
 gi|148371219|gb|ABQ61198.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase
           [Brucella ovis ATCC 25840]
          Length = 644

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|153815291|ref|ZP_01967959.1| hypothetical protein RUMTOR_01525 [Ruminococcus torques ATCC
          27756]
 gi|317501652|ref|ZP_07959843.1| ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088465|ref|ZP_08337380.1| hypothetical protein HMPREF1025_00963 [Lachnospiraceae bacterium
          3_1_46FAA]
 gi|145847353|gb|EDK24271.1| hypothetical protein RUMTOR_01525 [Ruminococcus torques ATCC
          27756]
 gi|316896903|gb|EFV18983.1| ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330408232|gb|EGG87720.1| hypothetical protein HMPREF1025_00963 [Lachnospiraceae bacterium
          3_1_46FAA]
          Length = 234

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          +  G F+   G  GAGKTT +++L
Sbjct: 31 IKKGEFVVIVGPSGAGKTTVLNIL 54


>gi|119719346|ref|YP_919841.1| signal recognition particle-docking protein FtsY [Thermofilum
           pendens Hrk 5]
 gi|119524466|gb|ABL77838.1| signal recognition particle-docking protein FtsY [Thermofilum
           pendens Hrk 5]
          Length = 302

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 8/97 (8%)

Query: 3   SGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
            G F I F G  G GKTT ++ L    +++ Y V +      T  A +   V  S     
Sbjct: 105 KGFFSILFLGPNGHGKTTTVAKLAYRFRKQGYRVAIAA--ADTFRAGSIEQV--SQWASR 160

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGK--ILLCD 96
            GAE  ++ + A         ++    +G   ++L D
Sbjct: 161 AGAEVVSLGYNADPAAVAYEAVKKG-EKGDFQVVLID 196


>gi|108812977|ref|YP_648744.1| ATPase [Yersinia pestis Nepal516]
 gi|229903414|ref|ZP_04518527.1| ABC transporter multidrug efflux pump, fused ATP-binding domains
          [Yersinia pestis Nepal516]
 gi|108776625|gb|ABG19144.1| ATPase [Yersinia pestis Nepal516]
 gi|229679184|gb|EEO75287.1| ABC transporter multidrug efflux pump, fused ATP-binding domains
          [Yersinia pestis Nepal516]
          Length = 580

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|91790524|ref|YP_551476.1| ABC transporter-like protein [Polaromonas sp. JS666]
 gi|91699749|gb|ABE46578.1| ABC transporter related protein [Polaromonas sp. JS666]
          Length = 350

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI F G  G GKTT + ++ 
Sbjct: 29 IRKGEFICFLGPSGCGKTTLLRIIA 53


>gi|15966990|ref|NP_387343.1| putative cell division protein [Sinorhizobium meliloti 1021]
 gi|307302458|ref|ZP_07582215.1| signal recognition particle-docking protein FtsY [Sinorhizobium
           meliloti BL225C]
 gi|307316212|ref|ZP_07595656.1| signal recognition particle-docking protein FtsY [Sinorhizobium
           meliloti AK83]
 gi|15076263|emb|CAC47816.1| Putative cell division protein [Sinorhizobium meliloti 1021]
 gi|306898052|gb|EFN28794.1| signal recognition particle-docking protein FtsY [Sinorhizobium
           meliloti AK83]
 gi|306903128|gb|EFN33718.1| signal recognition particle-docking protein FtsY [Sinorhizobium
           meliloti BL225C]
          Length = 548

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 16/152 (10%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L   L      V +    G T  A A     L    +   +E  +  
Sbjct: 350 GVNGTGKTTTIGKLAAKLSGAGLKVMLAA--GDTFRAAAIEQ--LKIWAERTKSEIVSSK 405

Query: 71  FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128
             A          + A  +   +L    +D+       R  ++   +  L++I   + ++
Sbjct: 406 LGADAAGLAYEAFQRAREQKADVLI---IDT-----AGRLQNKAELMAELEKIVRVLGKL 457

Query: 129 MPDC--TIILDLPVDIGLKRVQNRYSLRESAC 158
            PD   T++  L    G   +Q     R  A 
Sbjct: 458 DPDAPHTVLQTLDATTGQNALQQVEIFRNVAG 489


>gi|329769019|ref|ZP_08260441.1| hypothetical protein HMPREF0433_00205 [Gemella sanguinis M325]
 gi|328839510|gb|EGF89086.1| hypothetical protein HMPREF0433_00205 [Gemella sanguinis M325]
          Length = 254

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +  G   +  G  G GK+T I LL + L 
Sbjct: 28 IKKGKITTILGKNGCGKSTLIKLLAKNLN 56


>gi|328958344|ref|YP_004375730.1| phosphate import ATP-binding protein PstB [Carnobacterium sp.
          17-4]
 gi|328674668|gb|AEB30714.1| phosphate import ATP-binding protein PstB [Carnobacterium sp.
          17-4]
          Length = 217

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G F++  G  G+GK+T + ++   L + + ++  
Sbjct: 31 GEFVTVTGPSGSGKSTLLKIIASMLSQTSGEILY 64


>gi|327291346|ref|XP_003230382.1| PREDICTED: adenylate kinase isoenzyme 1-like [Anolis carolinensis]
          Length = 209

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 62/221 (28%), Gaps = 54/221 (24%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
           F+   G  G+GK T    + +   +  Y    T         +  R  + S         
Sbjct: 27  FVV--GGPGSGKGTQCERIVQ---KYGYTHLST--------GDLLRAEVSSGSDRG---- 69

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDS----SQHLFL 117
                            +   + +G+++    + D   D+  A  G             +
Sbjct: 70  ---------------KKLSAIMEKGELVPLDTVLDMLRDAMVAKAGSSKGYLIDGYPREV 114

Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEK-- 172
              +E   +   P   + +D   +  +KR+  R     S  +D  E   +K +  + K  
Sbjct: 115 KQGEEFEKKIAPPSLLLYVDAGKETMVKRLLKRGET--SGRVDDNEETIKKRLDTYYKAT 172

Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211
                 +             +++  S   V   +   +  L
Sbjct: 173 EPVIAFYEKR-----GIVRKLNAEGSVDEVFQQVCKHLDAL 208


>gi|322411686|gb|EFY02594.1| Multidrug/protein/lipid ABC transporter family, ATP-binding and
           permease protein [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 575

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           ++  G  G+GKTT I+LL RF +  +  + + + P      E  R ++
Sbjct: 369 VAIVGPTGSGKTTLINLLMRFYEVDDGSIMLDQVPIKDYDKEEFRSII 416


>gi|306833712|ref|ZP_07466839.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
          transporter, ABC protein [Streptococcus bovis ATCC
          700338]
 gi|304424482|gb|EFM27621.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
          transporter, ABC protein [Streptococcus bovis ATCC
          700338]
          Length = 257

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 18/27 (66%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQ 29
          +G FI+  G  G+GKTT + ++ + ++
Sbjct: 31 NGEFITILGTSGSGKTTMLKMINKLIE 57


>gi|299132263|ref|ZP_07025458.1| sulfate adenylyltransferase, large subunit [Afipia sp. 1NLS2]
 gi|298592400|gb|EFI52600.1| sulfate adenylyltransferase, large subunit [Afipia sp. 1NLS2]
          Length = 638

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 19/87 (21%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+R L  +                     +LL       G  ++ 
Sbjct: 461 FTGLPGAGKSTLARALERRLFSRGGSA-----------------ILLDGDTLRAGLNSDL 503

Query: 69  IVFAAARLDHVENVIRPA--LMEGKIL 93
              +  R +++  +   A  L     +
Sbjct: 504 GFSSDDRRENIRRLAEVAAHLARNGHI 530


>gi|297528711|ref|YP_003669986.1| ABC transporter [Geobacillus sp. C56-T3]
 gi|297251963|gb|ADI25409.1| ABC transporter related protein [Geobacillus sp. C56-T3]
          Length = 230

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G  GAGK+T + +L   L+    ++ +   P      +    ++ S  +       E ++
Sbjct: 38  GPNGAGKSTLLKMLTGLLRPTKGEIVINGHPWSRKVLKDIGALIESPALYGNLTAYENLL 97

Query: 71  FAAARLDHVENVIRPALM 88
             A  L   ++ I+  L 
Sbjct: 98  VHAKLLHLPDSRIQEVLN 115


>gi|295096099|emb|CBK85189.1| ABC-type hemin transport system, ATPase component [Enterobacter
          cloacae subsp. cloacae NCTC 9394]
          Length = 259

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          ++ G  ++  G  GAGK+T + LL  +L+
Sbjct: 27 LSQGELVTLIGPNGAGKSTLLRLLTGYLK 55


>gi|260886927|ref|ZP_05898190.1| signal recognition particle protein [Selenomonas sputigena ATCC
           35185]
 gi|330839284|ref|YP_004413864.1| signal recognition particle protein [Selenomonas sputigena ATCC
           35185]
 gi|260862989|gb|EEX77489.1| signal recognition particle protein [Selenomonas sputigena ATCC
           35185]
 gi|329747048|gb|AEC00405.1| signal recognition particle protein [Selenomonas sputigena ATCC
           35185]
          Length = 456

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 20/153 (13%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67
           G++GAGKTT    L   L+++     +       PAA     VL   L   V       +
Sbjct: 108 GLQGAGKTTSAGKLGLSLKKQGKKPLLVAADIYRPAAVKQLQVLGEQLGIPVFSMPQGTD 167

Query: 68  AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127
           A+  A + +DH  + I        +++ D            R       +  L++I   +
Sbjct: 168 AVTIARSSIDHARSHI------NDVVIID---------TAGRLHIDEKLMQELKDI-KAD 211

Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160
           V P   I+L +    G   V    S  E   +D
Sbjct: 212 VKPH-EILLVVDAMTGQDAVNVAESFNEGLGID 243


>gi|259501248|ref|ZP_05744150.1| guanylate kinase [Lactobacillus iners DSM 13335]
 gi|302191056|ref|ZP_07267310.1| guanylate kinase [Lactobacillus iners AB-1]
 gi|309803328|ref|ZP_07697423.1| guanylate kinase [Lactobacillus iners LactinV 11V1-d]
 gi|309805101|ref|ZP_07699154.1| guanylate kinase [Lactobacillus iners LactinV 09V1-c]
 gi|312871072|ref|ZP_07731174.1| guanylate kinase [Lactobacillus iners LEAF 3008A-a]
 gi|315653236|ref|ZP_07906159.1| guanylate kinase [Lactobacillus iners ATCC 55195]
 gi|259167375|gb|EEW51870.1| guanylate kinase [Lactobacillus iners DSM 13335]
 gi|308164492|gb|EFO66744.1| guanylate kinase [Lactobacillus iners LactinV 11V1-d]
 gi|308165555|gb|EFO67785.1| guanylate kinase [Lactobacillus iners LactinV 09V1-c]
 gi|311093400|gb|EFQ51742.1| guanylate kinase [Lactobacillus iners LEAF 3008A-a]
 gi|315489399|gb|EFU79038.1| guanylate kinase [Lactobacillus iners ATCC 55195]
          Length = 185

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M     I   G  GAGKTT  + L+          H TR P
Sbjct: 1  MKK--IIIIAGPSGAGKTTISNYLQEKYNIPRVLTHTTRPP 39


>gi|229825658|ref|ZP_04451727.1| hypothetical protein GCWU000182_01020 [Abiotrophia defectiva ATCC
           49176]
 gi|229790221|gb|EEP26335.1| hypothetical protein GCWU000182_01020 [Abiotrophia defectiva ATCC
           49176]
          Length = 518

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           M  G  I  EG  G GKTT +  +   +   + +V +
Sbjct: 347 MERGQKIVIEGANGIGKTTLLKSIMGLIPALSGEVKL 383


>gi|227530437|ref|ZP_03960486.1| deoxyadenosine kinase [Lactobacillus vaginalis ATCC 49540]
 gi|227349669|gb|EEJ39960.1| deoxyadenosine kinase [Lactobacillus vaginalis ATCC 49540]
          Length = 211

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 57/195 (29%), Gaps = 41/195 (21%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73
           G GKTT    +   L  K Y           P  E     L      ++G   +      
Sbjct: 10  GVGKTTLTGKIAEHLNTKAY---------YEPVGENPVLPLYYANPKQYGFLLQIYFLNK 60

Query: 74  ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119
                   +I+ AL +   +L DR  + D+ +  +   +                  +  
Sbjct: 61  RFS-----MIKQALSDDNNVL-DRSIYEDALFTRENNAEGNISDTELEVYLKLLDNMMAD 114

Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179
           L  +  +   PD  +  +   +  L R++ R    E    +  E KD          +  
Sbjct: 115 LNRLPKKA--PDLMVYSETDFETILYRIKKRGRDYEQVDKNP-ELKDY---------YYK 162

Query: 180 IARNQPDRCHIVDSA 194
           +     D     D++
Sbjct: 163 MWNAYKDWYRDYDAS 177


>gi|269926122|ref|YP_003322745.1| excinuclease ABC, A subunit [Thermobaculum terrenum ATCC BAA-798]
 gi|269789782|gb|ACZ41923.1| excinuclease ABC, A subunit [Thermobaculum terrenum ATCC BAA-798]
          Length = 958

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 4   GLFISFEGIEGAGKTTHIS-LLKRFLQRKNY 33
           G FI   G+ G+GK+T ++ +L R L ++ Y
Sbjct: 642 GKFICVTGVSGSGKSTLVNDILYRRLAQEFY 672


>gi|225572428|ref|ZP_03781292.1| hypothetical protein RUMHYD_00722 [Blautia hydrogenotrophica DSM
          10507]
 gi|225040065|gb|EEG50311.1| hypothetical protein RUMHYD_00722 [Blautia hydrogenotrophica DSM
          10507]
          Length = 355

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G FI+F G  G GKTT + ++ 
Sbjct: 28 IQRGEFITFLGPSGCGKTTTLRIIA 52


>gi|289207356|ref|YP_003459422.1| signal recognition particle-docking protein FtsY [Thioalkalivibrio
           sp. K90mix]
 gi|288942987|gb|ADC70686.1| signal recognition particle-docking protein FtsY [Thioalkalivibrio
           sp. K90mix]
          Length = 347

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           GI GAGKTT I  L    + +   V +
Sbjct: 149 GINGAGKTTTIGKLAHRFKDEGRSVLL 175


>gi|224373550|ref|YP_002607922.1| signal recognition particle-docking protein FtsY [Nautilia
           profundicola AmH]
 gi|223588955|gb|ACM92691.1| signal recognition particle-docking protein FtsY [Nautilia
           profundicola AmH]
          Length = 289

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G+ GAGKTT I+ L    + +   V +
Sbjct: 91  GVNGAGKTTTIAKLAHKFKSEGKSVIL 117


>gi|210623053|ref|ZP_03293540.1| hypothetical protein CLOHIR_01490 [Clostridium hiranonis DSM 13275]
 gi|210153856|gb|EEA84862.1| hypothetical protein CLOHIR_01490 [Clostridium hiranonis DSM 13275]
          Length = 918

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 45/192 (23%)

Query: 14  GAGKTTHISLLKRFLQRKNYDVHV------TR------------------EPGGTPAAEA 49
           G GKT  +      LQ    DV V      TR                  E  G    E 
Sbjct: 32  GVGKTYAMLEAAHSLQDNGIDVVVGYIEPHTRPDTMALLDGLERIPVKQVEYKGIKLNEF 91

Query: 50  ARHVLLSCGVDEFGAEAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108
                L         +  A   A  +R +     I   L+ G  +       ++   Q  
Sbjct: 92  DIDAALKRRPHTILVDEFAHTNAKGSRHNKRWKDIEELLLAGINV------YTTLNVQHL 145

Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTI--------ILDLPVDIGLKRVQNRYSLRESACLD 160
              +    ++ +  I+++E +PD  I        ++D+  +  L+R +      ++    
Sbjct: 146 ESLND--IMEIITNINIKETVPDKVIGDSYTQIELIDIEPEELLERFKEGKIYEKTQA-- 201

Query: 161 YFERKDVMIHEK 172
             ER       K
Sbjct: 202 --ERAKENFFVK 211


>gi|172038885|ref|YP_001805386.1| adenylylsulfate kinase [Cyanothece sp. ATCC 51142]
 gi|171700339|gb|ACB53320.1| adenylylsulfate kinase [Cyanothece sp. ATCC 51142]
          Length = 193

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 9  FEGIEGAGKTTHISLLKRFLQRKNY 33
          F G+ GAGKTT    L++ L+   Y
Sbjct: 22 FTGLSGAGKTTITRALEQKLRDAGY 46


>gi|170751708|ref|YP_001757968.1| signal recognition particle-docking protein FtsY [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658230|gb|ACB27285.1| signal recognition particle-docking protein FtsY [Methylobacterium
           radiotolerans JCM 2831]
          Length = 466

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           G+ GAGKTT +  L   L+ +   V +    G T  A A   +
Sbjct: 268 GVNGAGKTTTLGKLASKLRAEGRTVMLAA--GDTFRAAAIDQL 308


>gi|153828286|ref|ZP_01980953.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae 623-39]
 gi|148876240|gb|EDL74375.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae 623-39]
          Length = 279

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 46 GKFSVIVGPNGCGKSTLLKSLCRLLK 71


>gi|153833908|ref|ZP_01986575.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|148869746|gb|EDL68723.1| conserved hypothetical protein [Vibrio harveyi HY01]
          Length = 184

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 23/109 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDE 61
           I   G  GAGKTT ++ L               E G    AE +R ++     L  GV  
Sbjct: 4   IVITGGPGAGKTTLLNALG--------------ELGYAIFAEGSRTLIEQQSQLDNGVLP 49

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110
           +    E   FA   L+ +    + AL   ++   DR +    AY     
Sbjct: 50  WTNLPE---FANLCLELMGKQKQEAL-SHEVAFVDRAIPDIVAYLKVGG 94


>gi|5731362|gb|AAD48883.1| ATPase [Vibrio cholerae]
          Length = 279

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 46 GKFSVIVGPNGCGKSTLLKSLCRLLK 71


>gi|20808374|ref|NP_623545.1| excinuclease ATPase subunit [Thermoanaerobacter tengcongensis MB4]
 gi|20516985|gb|AAM25149.1| Excinuclease ATPase subunit [Thermoanaerobacter tengcongensis MB4]
          Length = 927

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 4   GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD 34
           G+FI   G+ G+GK+T +  +L + L +K Y 
Sbjct: 618 GVFICVTGVSGSGKSTLVNEILYKALAQKIYK 649


>gi|103486243|ref|YP_615804.1| ABC transporter related [Sphingopyxis alaskensis RB2256]
 gi|98976320|gb|ABF52471.1| ABC transporter related [Sphingopyxis alaskensis RB2256]
          Length = 365

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          M    FI+F G  G+GK+T + ++ 
Sbjct: 26 MERKEFIAFLGPSGSGKSTLLRIIA 50


>gi|99080693|ref|YP_612847.1| glycerol-3-phosphate transporter ATP-binding subunit [Ruegeria
          sp. TM1040]
 gi|123077722|sp|Q1GID1|UGPC_SILST RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
          UgpC
 gi|99036973|gb|ABF63585.1| ABC transporter related [Ruegeria sp. TM1040]
          Length = 351

 Score = 35.4 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +N G FI   G  G GK+T + ++ 
Sbjct: 26 INDGEFIVIVGPSGCGKSTLLRMIA 50


>gi|319784631|ref|YP_004144107.1| sulfate adenylyltransferase large subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170519|gb|ADV14057.1| sulfate adenylyltransferase, large subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 647

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 20/89 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ G+GK+T  +L ++ L       +                 +L       G   + 
Sbjct: 470 FTGLSGSGKSTIANLFEKKLFATGRHTY-----------------ILDGDNVRHGLNRDL 512

Query: 69  IVFAAARLD---HVENVIRPALMEGKILL 94
               A R++    V  V R     G I++
Sbjct: 513 GFTDADRVENIRRVAEVARLMADAGLIVI 541


>gi|313892794|ref|ZP_07826375.1| excinuclease ABC, A subunit [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442725|gb|EFR61136.1| excinuclease ABC, A subunit [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 729

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 4   GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC- 57
           GLF    G+ G+GK+T I       L   L R N+ V   +E  G    +   ++  S  
Sbjct: 409 GLFNVVTGVSGSGKSTLINEILYKGLANQLYRSNHKVGAHKEIRGLEHIDKIINIDQSPI 468

Query: 58  -GVDEFGAEAEAIVFAAAR 75
                        VF A R
Sbjct: 469 GRTPRSNPATYTGVFDAIR 487


>gi|312221359|emb|CBY01299.1| similar to multidrug resistance protein 1 [Leptosphaeria maculans]
          Length = 1287

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 4    GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
            G FI+  G  G+GK+T + LL+RF    +  V V
Sbjct: 1058 GQFIALVGASGSGKSTVMQLLERFYDATDGSVFV 1091


>gi|309807930|ref|ZP_07701859.1| guanylate kinase [Lactobacillus iners LactinV 01V1-a]
 gi|308168841|gb|EFO70930.1| guanylate kinase [Lactobacillus iners LactinV 01V1-a]
          Length = 185

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M     I   G  GAGKTT  + L+          H TR P
Sbjct: 1  MKK--IIIIAGPSGAGKTTISNYLQEKYNIPRVLTHTTRPP 39


>gi|303325929|ref|ZP_07356372.1| adenylyl-sulfate kinase [Desulfovibrio sp. 3_1_syn3]
 gi|302863845|gb|EFL86776.1| adenylyl-sulfate kinase [Desulfovibrio sp. 3_1_syn3]
          Length = 198

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37
          G+ G+GKTT  SLL+ +L+ + ++V  
Sbjct: 9  GLSGSGKTTLGSLLRLYLETRGHEVEF 35


>gi|322434435|ref|YP_004216647.1| adenylylsulfate kinase [Acidobacterium sp. MP5ACTX9]
 gi|321162162|gb|ADW67867.1| adenylylsulfate kinase [Acidobacterium sp. MP5ACTX9]
          Length = 170

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 68/215 (31%), Gaps = 53/215 (24%)

Query: 5   LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
           + I   G+ G+GK+T    +   L      V +         A+  R  L S        
Sbjct: 1   MLIWLTGLSGSGKSTLARQVFETLAAAGCRVELL-------DADEVRAQLSSGLGFSKSD 53

Query: 65  EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124
             E       RL +V  ++R     G I+L    + +   Y+  RD  +     +  E  
Sbjct: 54  REE----NVRRLGYVGGLLR---AHGVIVL----VAAMSPYRAGRDEIRKTAPSAFVE-- 100

Query: 125 VQEVMPDCTIILDLPVDIGLKR----VQNRYSLRESACLDYFER--KDVMIHEKRRQIFL 178
                    + +D P+ I  +R    +  R+   E   L   +   +  +          
Sbjct: 101 ---------VFVDAPLAICEERDPIGLYRRFRAGEVHNLSGLDAPYEPPL---------- 141

Query: 179 DIARNQPD-RCHIVDSAHSFQSVATNILNIVWELV 212
                 P+  CH   +  + +    +IL  V   +
Sbjct: 142 -----NPEVHCHT--AQQTIEESVADILKTVRPFL 169


>gi|299141247|ref|ZP_07034384.1| deoxynucleoside kinase family protein [Prevotella oris C735]
 gi|298577207|gb|EFI49076.1| deoxynucleoside kinase family protein [Prevotella oris C735]
          Length = 206

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 67/215 (31%), Gaps = 43/215 (20%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLS---CGVDEF 62
           I+  G  G+GKTT   LL +               G TP  EA   +  L      +  +
Sbjct: 3   IAIAGNIGSGKTTLTELLAKH-------------YGWTPKYEAVDYNPYLEDYYKDIPRW 49

Query: 63  GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQH 114
               E         D ++       M  + ++ DR +         ++Y      +    
Sbjct: 50  SFNMEVFFLKERFKDLLQ---LDQNMNKETIVQDRSIYEGVYVFTENNYKMGNMNERDFQ 106

Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDV---MIH 170
            +++    ++     PD  I L   V   +K +QNR    E    L Y E  +       
Sbjct: 107 TYMELFDSMTHILHYPDLMIYLKSSVPHLVKNIQNRGREYEQKMPLAYLESLNDLYEDFI 166

Query: 171 EKRRQI-----------FLDIARNQPDRCHIVDSA 194
            ++ +            +L   R+       +D+ 
Sbjct: 167 YRKYKGKVLVVDVDDIDYLHSKRDFSGIIDKIDAN 201


>gi|297623027|ref|YP_003704461.1| cytidylate kinase [Truepera radiovictrix DSM 17093]
 gi|297164207|gb|ADI13918.1| cytidylate kinase [Truepera radiovictrix DSM 17093]
          Length = 242

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 70/229 (30%), Gaps = 49/229 (21%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65
           I+ +G   +GK++   L+ + L                 +    R    L+    E   +
Sbjct: 34  ITIDGPAASGKSSVSRLVAQRL---GIPYV--------SSGLLYRAATYLAQTSGEALDD 82

Query: 66  AEAIVFAAARLDHVENVIRPALMEGKILL----------CDRFLDSSYAYQGERDSSQHL 115
             A++    R  H   ++       +I +           DR +D+  +        +  
Sbjct: 83  EGALLQLLDR--HRVQLVTAVGARNRIAVDGRTLDHELHTDR-VDAGVSVVARHPGVRAW 139

Query: 116 FLDSLQE----ISVQE------VMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFE 163
               L+E      V+       V P       L  P ++   R   R   R        E
Sbjct: 140 VDARLRELTGAFVVEGRDMGTQVFPHAAAKFYLSAPPEV---RAARRVGERAGD----LE 192

Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHI-VDS-AHSFQSVATNILNIVWE 210
                +  + +   LD  +++P    + +D+   +   V   IL  + E
Sbjct: 193 AVTAALRRRDQ---LDAVQSRPAPEAVYLDTRDLTLDEVVARILGALPE 238


>gi|298291676|ref|YP_003693615.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Starkeya novella DSM 506]
 gi|296928187|gb|ADH88996.1| molybdopterin-guanine dinucleotide biosynthesis protein B
          [Starkeya novella DSM 506]
          Length = 179

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64
            I F G  GAGKTT ++ L   L  + + V   +        +                
Sbjct: 2  RLIGFAGWSGAGKTTLLARLIPVLVGRGHRVSTIKHAHHNFDVDQPGK---DSHTHRVVG 58

Query: 65 EAEAIVFAAARLDHVENV 82
            E +V +A R   +  +
Sbjct: 59 ATEVLVSSANRWALMHEL 76


>gi|296271092|ref|YP_003653724.1| adenylylsulfate kinase [Thermobispora bispora DSM 43833]
 gi|296093879|gb|ADG89831.1| adenylylsulfate kinase [Thermobispora bispora DSM 43833]
          Length = 405

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 6/53 (11%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
             GL + F G+ GAGK+T    ++  L  +                +  R +L
Sbjct: 227 RRGLVVFFTGLSGAGKSTIARGVRDALLERGGRTVT------YLDGDVVRRLL 273


>gi|293400311|ref|ZP_06644457.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae
          bacterium 5_2_54FAA]
 gi|291306711|gb|EFE47954.1| ABC transporter, ATP-binding protein [Erysipelotrichaceae
          bacterium 5_2_54FAA]
          Length = 254

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 24/50 (48%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
          M  G FI+  G  G+GKTT ++++         D++V  E   T   EA 
Sbjct: 30 MEQGEFIAVMGASGSGKTTLLNVIATIDTPSGGDIYVQDENVSTKKEEAL 79


>gi|290985676|ref|XP_002675551.1| cytoplasmic dynein [Naegleria gruberi]
 gi|284089148|gb|EFC42807.1| cytoplasmic dynein [Naegleria gruberi]
          Length = 3949

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 24/118 (20%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            +   G  G+GKTT   +L   L++ N  +      P   P     RH LL     +    
Sbjct: 1685 VVLVGPSGSGKTTIWHVLSEALKKINQKLKSYVVNPKAMP-----RHQLLGHMDMDTREW 1739

Query: 66   AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123
             E I+ A +R+   E    P +M    ++CD                   +++SL  +
Sbjct: 1740 FEGIITANSRIILKEE---PDVMS--WMVCD-------------GDIDPEWVESLNSV 1779


>gi|238753344|ref|ZP_04614707.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          ruckeri ATCC 29473]
 gi|238708297|gb|EEQ00652.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          ruckeri ATCC 29473]
          Length = 580

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|238763830|ref|ZP_04624788.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          kristensenii ATCC 33638]
 gi|238697960|gb|EEP90719.1| Uncharacterized ABC transporter ATP-binding protein [Yersinia
          kristensenii ATCC 33638]
          Length = 165

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 11 GIEGAGKTTHISLLKRFLQ 29
          G +GAGKTT + +L   L+
Sbjct: 42 GPDGAGKTTLLRMLAGLLK 60


>gi|284991384|ref|YP_003409938.1| LuxR family transcriptional regulator [Geodermatophilus obscurus
           DSM 43160]
 gi|284064629|gb|ADB75567.1| transcriptional regulator, LuxR family [Geodermatophilus obscurus
           DSM 43160]
          Length = 901

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 52/152 (34%), Gaps = 24/152 (15%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           G+ G GK+T + LL     R    VH     E   +        +L    V   G +   
Sbjct: 32  GLPGIGKSTTVGLLAARFARAGTSVHWVEADEMSRSRPFGLIAGLLGVEAVYPPGPDT-- 89

Query: 69  IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128
                   D +         EG +LLC    D    +Q + DS     L  L ++S    
Sbjct: 90  -------GDRMVEATERLCAEGPVLLC---ADDL--HQADGDSLD--LLGWLVDMSRYLP 135

Query: 129 MPDCTIILD---LPVDIGLKRVQNRYSLRESA 157
               +++L    LPV  GL  +  R  + E  
Sbjct: 136 ---LSLLLTRRPLPVREGLAVLAARPDVHEVE 164


>gi|224438196|ref|ZP_03659131.1| signal recognition particle-docking GTPase FtsY [Helicobacter
           cinaedi CCUG 18818]
 gi|313144641|ref|ZP_07806834.1| signal recognition particle-docking GTPase FtsY [Helicobacter
           cinaedi CCUG 18818]
 gi|313129672|gb|EFR47289.1| signal recognition particle-docking GTPase FtsY [Helicobacter
           cinaedi CCUG 18818]
          Length = 290

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 4/53 (7%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58
            I   G+ GAGKTT I+ L    Q++   V +    G T  A A   + L   
Sbjct: 90  LIV--GVNGAGKTTSIAKLANLAQKEGKKVMLAA--GDTFRAAAIEQIKLWGE 138


>gi|224475712|ref|YP_002633318.1| putative deoxynucleoside kinase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420319|emb|CAL27133.1| putative deoxynucleoside kinase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 220

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 49/161 (30%), Gaps = 28/161 (17%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK++    L + L  +      + E           +  L    D+F   +
Sbjct: 12  ITIAGTVGVGKSSLTRALAKKLNFR-----TSFENVD-------HNPYLDKFYDDFERWS 59

Query: 67  EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117
             +   F A R        +     G   + DR +      +A     QG          
Sbjct: 60  FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMSKEDFETY 115

Query: 118 DSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
             L +   ++     PD  + L+   D  + R+  R    E
Sbjct: 116 SQLFDAMVMTPYFPKPDVLVYLECDYDEVIDRIHQRGRQME 156


>gi|194437902|ref|ZP_03069996.1| BfpD [Escherichia coli 101-1]
 gi|194423123|gb|EDX39116.1| BfpD [Escherichia coli 101-1]
          Length = 531

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 31/116 (26%)

Query: 11  GIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPA-----------------AEAA 50
           G  G+GK+T +  L   L   +R+  ++    +P                       E  
Sbjct: 259 GPTGSGKSTTLKNLLELLYVERRQKVNIISIEDPPEYEIEGTAQLPVTNVETEQQRGEEY 318

Query: 51  RHVL---LSCGVDEFGA----EAEA--IVFAAARLDHVENVIRPALMEGKILLCDR 97
           R  +   L    D        +AE   ++F AA   H   V         I + DR
Sbjct: 319 RKAITAALRSDPDIIMPGEARDAEVINLLFTAAMTGH--QVWTSLHANNAIAIFDR 372


>gi|251795310|ref|YP_003010041.1| deoxynucleoside kinase [Paenibacillus sp. JDR-2]
 gi|247542936|gb|ACS99954.1| deoxynucleoside kinase [Paenibacillus sp. JDR-2]
          Length = 224

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 35/184 (19%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65
            I+  G  G GK+T  S L   L               T   +   +  L     +F   
Sbjct: 10  LITIAGTVGVGKSTLTSALAERL------------GFRTSLEQVEHNPYLEKFYHDFERW 57

Query: 66  AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLF 116
           +  +   F A R        +     G   + DR  + D+       A QG   ++ +  
Sbjct: 58  SFHLQIYFLAERF----KEQKAIFEAGGGFVQDRSIYEDTGIFAKMHADQGTMTATDYAT 113

Query: 117 LDSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173
             SL E   ++     PD  I L+  +   + R+  R    E        + +    E+ 
Sbjct: 114 YTSLFEAMVMTPYFPHPDVLIYLEGSLPSIVNRITARGREMEI-------QTERAYWERM 166

Query: 174 RQIF 177
            + +
Sbjct: 167 HERY 170


>gi|26553862|ref|NP_757796.1| ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2]
 gi|26453869|dbj|BAC44200.1| ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2]
          Length = 663

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
           I+  G  G+GKTT I+LL +F   ++ D+ +      T   E+ R 
Sbjct: 448 IAIVGPTGSGKTTIINLLTKFYDIEDGDIFIDGYDIKTVTKESMRK 493


>gi|15128575|dbj|BAB62754.1| putative ATP-binding protein of ABC transporter [Streptococcus
           criceti]
          Length = 252

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 27/162 (16%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----GGTPAAEAARHVLLSCGVDE 61
           FI+  G  GAGK+T  +++   L   +  +H+  E          A+    V     +  
Sbjct: 37  FITILGGNGAGKSTLFNVIAGTLMLTSGSIHIMGEDVTHLPAQKRAKYLSRVFQDPKMGT 96

Query: 62  FGAEA--EAIVFAAARLD---HVENVIRPALMEGKILLC------DRFLDSSYAYQGERD 110
                  E ++ A  R +    V   I     + ++L+       D+ LD+     G   
Sbjct: 97  APRMTVAENLLVAKYRGESRGLVPRKIHTFRDDFQMLIAQIGNGLDKHLDTPT---GFLS 153

Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRV 147
             Q   L  L         PD  ++LD     L        +
Sbjct: 154 GGQRQALSLLMATVK---RPDL-LLLDEHTAALDPKTSQSLM 191


>gi|145222860|ref|YP_001133538.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Mycobacterium gilvum PYR-GCK]
 gi|145215346|gb|ABP44750.1| adenylylsulfate kinase [Mycobacterium gilvum PYR-GCK]
          Length = 618

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 20/97 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G  + F G+ G+GK++    ++R L  K    +                 +L     
Sbjct: 443 LSKGRTVWFTGLSGSGKSSVAVRVERKLLEKGVPAY-----------------VLDGDNL 485

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILL 94
             G  A+       R ++   +   A      G+++L
Sbjct: 486 RHGLNADLGFSMDDRAENQRRLAYVAAILADAGQVVL 522


>gi|107024253|ref|YP_622580.1| glycerol-3-phosphate transporter ATP-binding subunit
          [Burkholderia cenocepacia AU 1054]
 gi|116688422|ref|YP_834045.1| glycerol-3-phosphate transporter ATP-binding subunit
          [Burkholderia cenocepacia HI2424]
 gi|123244319|sp|Q1BRZ8|UGPC_BURCA RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
          UgpC
 gi|152061117|sp|A0K3S5|UGPC_BURCH RecName: Full=sn-glycerol-3-phosphate import ATP-binding protein
          UgpC
 gi|105894442|gb|ABF77607.1| glycerol 3-phosphate ABC transporter ATP-binding protein
          [Burkholderia cenocepacia AU 1054]
 gi|116646511|gb|ABK07152.1| glycerol 3-phosphate ABC transporter ATP-binding protein
          [Burkholderia cenocepacia HI2424]
          Length = 361

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56
          G FI   G  G GK+T + ++   L+            V  T EP     A   ++  L 
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAG-LESVTDGEIAIGDRVVNTLEPKDRDIAMVFQNYALY 88

Query: 57 CGVD 60
            + 
Sbjct: 89 PHMT 92


>gi|327440790|dbj|BAK17155.1| cytidylate kinase [Solibacillus silvestris StLB046]
          Length = 224

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29
          M   + I+ +G  GAGK+T   ++   L+
Sbjct: 1  MMKKIQIAIDGPAGAGKSTIAKIVAEALR 29


>gi|319896913|ref|YP_004135108.1| cytidylate kinase [Haemophilus influenzae F3031]
 gi|317432417|emb|CBY80772.1| cytidylate kinase [Haemophilus influenzae F3031]
          Length = 225

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFL 28
          G+ I+ +G  GAGK T    L   L
Sbjct: 2  GMIITVDGPSGAGKGTLCYALAEKL 26


>gi|320106880|ref|YP_004182470.1| signal recognition particle protein [Terriglobus saanensis SP1PR4]
 gi|319925401|gb|ADV82476.1| signal recognition particle protein [Terriglobus saanensis SP1PR4]
          Length = 460

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           G++G+GKTT    L  +L++  +   +       PAA     ++
Sbjct: 107 GLQGSGKTTTSGKLAAWLKKGGHRPMLVSVDVYRPAARQQLEIV 150


>gi|326780167|ref|ZP_08239432.1| Iron-chelate-transporting ATPase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326660500|gb|EGE45346.1| Iron-chelate-transporting ATPase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 266

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 13/108 (12%)

Query: 6   FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHV-LLSCGVDEFG 63
           F    G    GK+T +  L R L+     V +  E     PA + AR + LL        
Sbjct: 31  FTVIVGPNACGKSTLLRALARMLKPSRGQVLLDGEAIHQLPAKKVARTLGLLPQSSIAPD 90

Query: 64  AEAEAIVFAAARLDHV----------ENVIRPALME-GKILLCDRFLD 100
               A + A  R  H           E V+  ++   G   L DR++D
Sbjct: 91  GITVADLVARGRYPHQGLLRQWSPQDERVVEESMESTGVAELADRYVD 138


>gi|293374633|ref|ZP_06620948.1| ABC transporter, ATP-binding protein [Turicibacter sanguinis
          PC909]
 gi|292646723|gb|EFF64718.1| ABC transporter, ATP-binding protein [Turicibacter sanguinis
          PC909]
          Length = 277

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52
          +N G F++  G  G+GK+T   LL   ++    +++V  +     +    R 
Sbjct: 29 INKGEFVTILGHNGSGKSTLSKLLVGLVKANEGEIYVDNQLLDEESVYDIRQ 80


>gi|291556499|emb|CBL33616.1| Zeta toxin [Eubacterium siraeum V10Sc8a]
          Length = 109

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKR 26
          M SG  I   G  G GKTT  +++ +
Sbjct: 1  MKSGRIIVITGAPGTGKTTTSAIVAK 26


>gi|317052717|ref|YP_004113833.1| signal recognition particle protein [Desulfurispirillum indicum S5]
 gi|316947801|gb|ADU67277.1| signal recognition particle protein [Desulfurispirillum indicum S5]
          Length = 462

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEA 68
           G++G+GKTT    L    +++   V +       PAA E  R +    GVD +    + 
Sbjct: 107 GLQGSGKTTTAGKLAASFKKQGRKVMLAGADIYRPAAVEQIRALAEQVGVDVYAPGTDI 165


>gi|317130043|ref|YP_004096325.1| adenylylsulfate kinase [Bacillus cellulosilyticus DSM 2522]
 gi|315474991|gb|ADU31594.1| adenylylsulfate kinase [Bacillus cellulosilyticus DSM 2522]
          Length = 202

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 33/94 (35%), Gaps = 14/94 (14%)

Query: 2   NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61
           + G  + F G+ G+GK+T  + +++ L  +                +  RH L      +
Sbjct: 28  HKGSVVWFTGLSGSGKSTLANAVEKKLHDQGIR-------TYVLDGDNIRHGLNKGLGFQ 80

Query: 62  FGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95
                E        +  +  V +  +  G ++L 
Sbjct: 81  PDDRKE-------NIRRIGEVSKLFVDAGIVVLT 107


>gi|269966092|ref|ZP_06180182.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269829239|gb|EEZ83483.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 251

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%)

Query: 7  ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
          I+  G  GAGK+T I LL    +  + +V+V   P    +A+  + +     +     ++
Sbjct: 22 IAIVGPSGAGKSTLIELLFGLRKPTSGEVYVCGYPLSRSSAKQRQELCQHIQLIPQEPQS 81

Query: 67 EAIVFAAARLDHVE 80
              +   R   +E
Sbjct: 82 SLNPYYTVRQILLE 95


>gi|262279319|ref|ZP_06057104.1| signal recognition particle-docking protein FtsY [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259670|gb|EEY78403.1| signal recognition particle-docking protein FtsY [Acinetobacter
           calcoaceticus RUH2202]
          Length = 370

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70
           G+ G GKTT I  L + LQ +   V +    G T  A A   + +    ++    A+   
Sbjct: 173 GVNGVGKTTTIGKLAKRLQGEGKKVMLAA--GDTFRAAATEQLQIWGERNDIAVVAQG-- 228

Query: 71  FAAARLDHVENVIRPALMEG-KILLCD 96
             A     + +    A  +G  +L+ D
Sbjct: 229 HGADSASVIFDAFESARAKGIDVLIAD 255


>gi|290957342|ref|YP_003488524.1| ABC transporter ATP-binding protein [Streptomyces scabiei 87.22]
 gi|260646868|emb|CBG69965.1| putative ABC transporter, ATP-binding subunit [Streptomyces scabiei
           87.22]
          Length = 260

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 60/192 (31%), Gaps = 24/192 (12%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR---HVLLSCGVD-EFGA 64
           F G  GAGKTT + +L   L        +      T  A   R   +V  S GVD +   
Sbjct: 38  FLGPNGAGKTTFLRMLTTLLPPTGGAATIAGHDLATDPAGVRRVCGYVAQSGGVDPQITV 97

Query: 65  EAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120
             E +    ++   R   VE     A       L DR    + A        +     +L
Sbjct: 98  REELVTQGRLYRLTRSQAVERAEELARELELTELLDR----TCAALSGGQRRRLDIAMAL 153

Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180
                    P   + LD     GL    +R  L E       E    +        +LD 
Sbjct: 154 TH------RP-RVLFLD-EPTTGLD-PGSRAGLWELVRRLRDEHGTTVFLTT---HYLDE 201

Query: 181 ARNQPDRCHIVD 192
           A    DR  +VD
Sbjct: 202 ADALADRIVVVD 213


>gi|260575202|ref|ZP_05843202.1| ABC transporter related protein [Rhodobacter sp. SW2]
 gi|259022462|gb|EEW25758.1| ABC transporter related protein [Rhodobacter sp. SW2]
          Length = 385

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLK 25
          +  G F++  G  G+GKTT + ++ 
Sbjct: 52 LARGRFLTILGPSGSGKTTLLRMIA 76


>gi|229530091|ref|ZP_04419481.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae 12129(1)]
 gi|229333865|gb|EEN99351.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae 12129(1)]
 gi|327483562|gb|AEA77969.1| Ferric vibriobactin, enterobactin transport system, ATP-binding
          protein ViuC [Vibrio cholerae LMA3894-4]
 gi|327483565|gb|AEA77972.1| Ferric vibriobactin, enterobactin transport system, ATP-binding
          protein ViuC [Vibrio cholerae LMA3894-4]
          Length = 279

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 46 GKFSVIVGPNGCGKSTLLKSLCRLLK 71


>gi|237794347|ref|YP_002861899.1| lipid A export ATP-binding/permease protein MsbA [Clostridium
          botulinum Ba4 str. 657]
 gi|229260782|gb|ACQ51815.1| lipid A export ATP-binding/permease protein MsbA [Clostridium
          botulinum Ba4 str. 657]
          Length = 257

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40
          M  G   +  G  G+GK+T + L+ RF   +   + + +E
Sbjct: 40 MKEGTLTALVGPSGSGKSTALKLVARFYDPQQRKILLGKE 79


>gi|227877536|ref|ZP_03995598.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus crispatus JV-V01]
 gi|227862868|gb|EEJ70325.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus crispatus JV-V01]
          Length = 516

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 7   ISFEGIEGAGKTTHISLL----KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I+ EG  G+GK+T I  L    +  + + NY++  + +    P         L     ++
Sbjct: 358 IAIEGKNGSGKSTLIKHLLGISQNLIAKGNYELIESLKISYLPQEFVMYSGSLKDFAKKY 417

Query: 63  GAEAEAIV-----FAAARLDHVENVIRPALMEGKIL 93
               EA++        AR D    + + ++ + K +
Sbjct: 418 HLSYEALLSNLKKMGFARADFTTRIEKMSMGQQKRV 453


>gi|227889464|ref|ZP_04007269.1| ABC superfamily ATP-binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849942|gb|EEJ60028.1| ABC superfamily ATP-binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 566

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 21/53 (39%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53
           +N G FIS  G  GAGKTT    +  F+  +       +        E A  +
Sbjct: 327 INQGDFISIVGQNGAGKTTLCRTICGFISNEGKITLKDQNLSDLSIKERAEKI 379


>gi|297205502|ref|ZP_06922898.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Lactobacillus jensenii JV-V16]
 gi|297150080|gb|EFH30377.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Lactobacillus jensenii JV-V16]
          Length = 261

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 2  NSGLFISFEGIEGAGKTTHISLL 24
            G FI   G  G+GKTT +++L
Sbjct: 45 KKGDFIVIMGASGSGKTTLLNIL 67


>gi|254172087|ref|ZP_04878763.1| cobyrinic Acid a,c-diamide synthase [Thermococcus sp. AM4]
 gi|214033983|gb|EEB74809.1| cobyrinic Acid a,c-diamide synthase [Thermococcus sp. AM4]
          Length = 301

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 19/47 (40%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
          G  +   G  G GKTT  +LL R L R  Y V    E      A A 
Sbjct: 35 GFRVVITGKGGVGKTTMTALLARLLARDGYRVLAVDEDPQMNLAHAL 81


>gi|254417118|ref|ZP_05030864.1| pantoate--beta-alanine ligase, putative [Microcoleus chthonoplastes
           PCC 7420]
 gi|196176096|gb|EDX71114.1| pantoate--beta-alanine ligase, putative [Microcoleus chthonoplastes
           PCC 7420]
          Length = 520

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 7   ISFEGIEGAGKTTHISLLKRFL 28
           I+ +G  GAGK+T   L+ + L
Sbjct: 294 IAIDGPAGAGKSTVTRLVAQQL 315


>gi|167969305|ref|ZP_02551582.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis H37Ra]
          Length = 334

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
           G+ G GK+T I  L   L  + + V  +  +P  T    + 
Sbjct: 65  GVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSI 105


>gi|163842462|ref|YP_001626866.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate
           kinase protein [Brucella suis ATCC 23445]
 gi|163673185|gb|ABY37296.1| sulfate adenylyltransferase, large subunit [Brucella suis ATCC
           23445]
          Length = 644

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+  +GK+T  + L++ L       +                 LL       G  ++ 
Sbjct: 467 FTGLSASGKSTIANRLEQRLHALGKHTY-----------------LLDGDNVRHGLNSDL 509

Query: 69  IVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126
               A R++++  V       G++  L+ D  L +  ++       +      L     +
Sbjct: 510 GFSDADRVENIRRV-------GEVARLMADAGLITLVSFISPFREERDQVRARL--PEGE 560

Query: 127 EVMPDCTIILDLPVDIGLKR 146
            +     I +D P++  + R
Sbjct: 561 FIE----IFIDTPIEECMAR 576


>gi|159467803|ref|XP_001692081.1| alpha subunit of the SRP receptor [Chlamydomonas reinhardtii]
 gi|158278808|gb|EDP04571.1| alpha subunit of the SRP receptor [Chlamydomonas reinhardtii]
          Length = 687

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           I F G+ G GK+T+++ +  +L   N  V +
Sbjct: 458 IVFCGVNGVGKSTNLAKIAYWLGSHNIKVMI 488


>gi|126730170|ref|ZP_01745982.1| Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC
          transporter:AAA ATPase [Sagittula stellata E-37]
 gi|126709550|gb|EBA08604.1| Uridine kinase:ATP/GTP-binding site motif A (P-loop):ABC
          transporter:AAA ATPase [Sagittula stellata E-37]
          Length = 354

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          SG  ++  G  G GK+T +  L  FL+    ++ V
Sbjct: 28 SGQLVTLLGPSGCGKSTTLRCLAGFLEPNGGEIMV 62


>gi|126730742|ref|ZP_01746552.1| ABC transporter related protein [Sagittula stellata E-37]
 gi|126708908|gb|EBA07964.1| ABC transporter related protein [Sagittula stellata E-37]
          Length = 246

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLL 24
          M +G  ++  G  G+GK+T + LL
Sbjct: 26 MAAGEIVTIVGPNGSGKSTLLRLL 49


>gi|308375592|ref|ZP_07444453.2| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis SUMu007]
 gi|308345814|gb|EFP34665.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis SUMu007]
          Length = 336

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
           G+ G GK+T I  L   L  + + V  +  +P  T    + 
Sbjct: 67  GVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSI 107


>gi|297581400|ref|ZP_06943323.1| adenylylsulfate kinase [Vibrio cholerae RC385]
 gi|297534238|gb|EFH73076.1| adenylylsulfate kinase [Vibrio cholerae RC385]
          Length = 215

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 20/90 (22%)

Query: 9   FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68
           F G+ GAGK+T    L+  L    Y  +                 LL       G  ++ 
Sbjct: 44  FTGLSGAGKSTVAGALENRLAALGYHTY-----------------LLDGDNVRHGLCSDL 86

Query: 69  IVFAAARLDHVE---NVIRPALMEGKILLC 95
                 R +++     + +     G I+L 
Sbjct: 87  GFSEQDRRENIRRIGELAKLMADAGLIVLT 116


>gi|72161709|ref|YP_289366.1| ABC-type nitrate/sulfonate/bicarbonate transport system ATPase
          component [Thermobifida fusca YX]
 gi|71915441|gb|AAZ55343.1| ABC-type nitrate/sulfonate/bicarbonate transport system ATPase
          component [Thermobifida fusca YX]
          Length = 277

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          ++G F++  G  G GK+T ++L    L+ +  +V  
Sbjct: 46 HAGEFVALLGPSGCGKSTILNLAAGLLRPRRGEVLF 81


>gi|18976873|ref|NP_578230.1| putative NTPase [Pyrococcus furiosus DSM 3638]
 gi|54036599|sp|Q8TH18|NTPTH_PYRFU RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase
          THEP1; AltName: Full=Nucleoside triphosphate
          phosphohydrolase
 gi|18892482|gb|AAL80625.1| gtpase domain, related to era and thdf [Pyrococcus furiosus DSM
          3638]
          Length = 184

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCG 58
          M    F    G+ G GKTT    +   ++R+ + V   +T+E          R + L  G
Sbjct: 1  MKKFRFFV-SGMPGVGKTTLAKRIADEIKREGFKVGGIITQEIRSGARRSGFRVIALDTG 59

Query: 59 V 59
           
Sbjct: 60 E 60


>gi|15608634|ref|NP_216012.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis H37Rv]
 gi|15840959|ref|NP_335996.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis CDC1551]
 gi|31792692|ref|NP_855185.1| arginine/ornithine transport system ATPase [Mycobacterium bovis
           AF2122/97]
 gi|121637428|ref|YP_977651.1| arginine/ornithine transport system ATPase [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148661290|ref|YP_001282813.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis H37Ra]
 gi|148822717|ref|YP_001287471.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis F11]
 gi|215403354|ref|ZP_03415535.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis 02_1987]
 gi|215411157|ref|ZP_03419965.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215426838|ref|ZP_03424757.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T92]
 gi|215430391|ref|ZP_03428310.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis EAS054]
 gi|215445692|ref|ZP_03432444.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T85]
 gi|218753215|ref|ZP_03532011.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis GM 1503]
 gi|219557405|ref|ZP_03536481.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T17]
 gi|224989903|ref|YP_002644590.1| arginine/ornithine transport system ATPase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253799452|ref|YP_003032453.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis KZN 1435]
 gi|254231725|ref|ZP_04925052.1| hypothetical protein TBCG_01472 [Mycobacterium tuberculosis C]
 gi|254364367|ref|ZP_04980413.1| hypothetical transport system kinase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254550515|ref|ZP_05140962.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|260186444|ref|ZP_05763918.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis CPHL_A]
 gi|260200555|ref|ZP_05768046.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T46]
 gi|260204782|ref|ZP_05772273.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis K85]
 gi|289442946|ref|ZP_06432690.1| LAO/AO transport system ATPase [Mycobacterium tuberculosis T46]
 gi|289447101|ref|ZP_06436845.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis CPHL_A]
 gi|289569523|ref|ZP_06449750.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T17]
 gi|289574179|ref|ZP_06454406.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis K85]
 gi|289745248|ref|ZP_06504626.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis 02_1987]
 gi|289750058|ref|ZP_06509436.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T92]
 gi|289753580|ref|ZP_06512958.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis EAS054]
 gi|289757609|ref|ZP_06516987.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T85]
 gi|289761655|ref|ZP_06521033.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis GM 1503]
 gi|294993242|ref|ZP_06798933.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis 210]
 gi|297634064|ref|ZP_06951844.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis KZN 4207]
 gi|297731050|ref|ZP_06960168.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis KZN R506]
 gi|306803206|ref|ZP_07439874.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis SUMu008]
 gi|313658383|ref|ZP_07815263.1| membrane ATPase/protein kinase [Mycobacterium tuberculosis KZN
           V2475]
 gi|54040178|sp|P63578|Y1533_MYCBO RecName: Full=Probable GTPase Mb1533
 gi|54042353|sp|P63577|Y1496_MYCTU RecName: Full=Probable GTPase Rv1496/MT1543
 gi|1524243|emb|CAB02046.1| Possible transport system kinase [Mycobacterium tuberculosis H37Rv]
 gi|13881165|gb|AAK45810.1| LAO/AO transport system kinase [Mycobacterium tuberculosis CDC1551]
 gi|31618282|emb|CAD96200.1| Possible transport system kinase [Mycobacterium bovis AF2122/97]
 gi|121493075|emb|CAL71546.1| Possible transport system kinase [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124600784|gb|EAY59794.1| hypothetical protein TBCG_01472 [Mycobacterium tuberculosis C]
 gi|134149881|gb|EBA41926.1| hypothetical transport system kinase [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148505442|gb|ABQ73251.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis H37Ra]
 gi|148721244|gb|ABR05869.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis F11]
 gi|224773016|dbj|BAH25822.1| arginine/ornithine transport system ATPase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253320955|gb|ACT25558.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis KZN 1435]
 gi|289415865|gb|EFD13105.1| LAO/AO transport system ATPase [Mycobacterium tuberculosis T46]
 gi|289420059|gb|EFD17260.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis CPHL_A]
 gi|289538610|gb|EFD43188.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis K85]
 gi|289543277|gb|EFD46925.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T17]
 gi|289685776|gb|EFD53264.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis 02_1987]
 gi|289690645|gb|EFD58074.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T92]
 gi|289694167|gb|EFD61596.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis EAS054]
 gi|289709161|gb|EFD73177.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis GM 1503]
 gi|289713173|gb|EFD77185.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis T85]
 gi|308350115|gb|EFP38966.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis SUMu008]
 gi|326903123|gb|EGE50056.1| arginine/ornithine transport system ATPase [Mycobacterium
           tuberculosis W-148]
          Length = 334

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 11  GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAA 50
           G+ G GK+T I  L   L  + + V  +  +P  T    + 
Sbjct: 65  GVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSI 105


>gi|15640798|ref|NP_230428.1| ferric vibriobactin ABC transporter, ATP-binding protein [Vibrio
          cholerae O1 biovar El Tor str. N16961]
 gi|121585766|ref|ZP_01675561.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae 2740-80]
 gi|147675717|ref|YP_001216264.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae O395]
 gi|153817277|ref|ZP_01969944.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae NCTC 8457]
 gi|153821408|ref|ZP_01974075.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae B33]
 gi|227080958|ref|YP_002809509.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae M66-2]
 gi|229505605|ref|ZP_04395115.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae BX 330286]
 gi|229510723|ref|ZP_04400202.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae B33]
 gi|229517844|ref|ZP_04407288.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae RC9]
 gi|229608624|ref|YP_002879272.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae MJ-1236]
 gi|254847917|ref|ZP_05237267.1| vibriobactin and enterobactin ABC transporter [Vibrio cholerae
          MO10]
 gi|298499087|ref|ZP_07008894.1| vibriobactin and enterobactin ABC transporter [Vibrio cholerae
          MAK 757]
 gi|9655227|gb|AAF93944.1| ferric vibriobactin ABC transporter, ATP-binding protein [Vibrio
          cholerae O1 biovar El Tor str. N16961]
 gi|121550129|gb|EAX60145.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae 2740-80]
 gi|126512193|gb|EAZ74787.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae NCTC 8457]
 gi|126521118|gb|EAZ78341.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae B33]
 gi|146317600|gb|ABQ22139.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae O395]
 gi|227008846|gb|ACP05058.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae M66-2]
 gi|227012603|gb|ACP08813.1| vibriobactin and enterobactin ABC transporter, ATP-binding
          protein [Vibrio cholerae O395]
 gi|229344559|gb|EEO09533.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae RC9]
 gi|229350688|gb|EEO15629.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae B33]
 gi|229357828|gb|EEO22745.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae BX 330286]
 gi|229371279|gb|ACQ61702.1| ferric vibriobactin enterobactin transport system ATP-binding
          protein ViuC [Vibrio cholerae MJ-1236]
 gi|254843622|gb|EET22036.1| vibriobactin and enterobactin ABC transporter [Vibrio cholerae
          MO10]
 gi|297543420|gb|EFH79470.1| vibriobactin and enterobactin ABC transporter [Vibrio cholerae
          MAK 757]
          Length = 279

 Score = 35.4 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 4  GLFISFEGIEGAGKTTHISLLKRFLQ 29
          G F    G  G GK+T +  L R L+
Sbjct: 46 GKFSVIVGPNGCGKSTLLKSLCRLLK 71


>gi|315443325|ref|YP_004076204.1| sulfate adenylyltransferase subunit 1 ;adenylylsulfate kinase
           [Mycobacterium sp. Spyr1]
 gi|315261628|gb|ADT98369.1| sulfate adenylyltransferase subunit 1 ;adenylylsulfate kinase
           [Mycobacterium sp. Spyr1]
          Length = 618

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 20/97 (20%)

Query: 1   MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60
           ++ G  + F G+ G+GK++    ++R L  K    +                 +L     
Sbjct: 443 LSKGRTVWFTGLSGSGKSSVAVRVERKLLEKGVPAY-----------------VLDGDNL 485

Query: 61  EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILL 94
             G  A+       R ++   +   A      G+++L
Sbjct: 486 RHGLNADLGFSMDDRAENQRRLAYVAAILADAGQVVL 522


>gi|309389705|gb|ADO77585.1| ABC transporter related protein [Halanaerobium praevalens DSM
          2228]
          Length = 265

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          N G FI+  G  GAGK+T ++ +      +N  + +
Sbjct: 30 NKGDFITIVGSNGAGKSTLLNSIAGVFPVENGSIIL 65


>gi|308171906|ref|YP_003918611.1| deoxyadenosine/deoxycytidine kinase [Bacillus amyloliquefaciens DSM
           7]
 gi|307604770|emb|CBI41141.1| deoxyadenosine/deoxycytidine kinase [Bacillus amyloliquefaciens DSM
           7]
 gi|328551714|gb|AEB22206.1| deoxyadenosine/deoxycytidine kinase [Bacillus amyloliquefaciens
           TA208]
 gi|328909974|gb|AEB61570.1| deoxyadenosine/deoxycytidine kinase [Bacillus amyloliquefaciens
           LL3]
          Length = 217

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 24/159 (15%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66
           I+  G  G GK+T    L + L    ++  +  E    P  E   H       + +    
Sbjct: 12  ITVAGTVGVGKSTLTKALAKRL---GFNTSL-EEVDENPYLEKFYH-----DFERWSFHL 62

Query: 67  EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119
           +   F A R        +     G   + DR  + D+       A +G    + +    S
Sbjct: 63  QIY-FLAERF----KEQKNMFESGGGFVQDRSIYEDTGIFAKMHADKGTMSLTDYKTYTS 117

Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155
           L E   ++     PD  I L+  ++  ++R++ R    E
Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENIIERIEKRGREME 156


>gi|306821696|ref|ZP_07455293.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,
           6-diaminopimelate ligase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550278|gb|EFM38272.1| possible UDP-N-acetylmuramoylalanyl-D-glutamate--2,
           6-diaminopimelate ligase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 441

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 16  GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75
           GKT+  +L+ +  ++  +         G         +L+      F   AE +V     
Sbjct: 56  GKTSTANLIYQSFEKAGHKSV--SNSRGDNIINGIVSLLIKNSSLGFKINAEVLVLEVDE 113

Query: 76  LDHVENVIRPALMEGKILLC 95
           L   +N+  P +    I++ 
Sbjct: 114 LTLAKNL--PYINASDIVIT 131


>gi|302348877|ref|YP_003816515.1| Transport system kinase [Acidilobus saccharovorans 345-15]
 gi|302329289|gb|ADL19484.1| Transport system kinase [Acidilobus saccharovorans 345-15]
          Length = 332

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 7   ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAAR 51
           I   GI GAGK+T IS L    +R+ Y V  +  +P     GG    +  R
Sbjct: 55  IGITGIPGAGKSTLISKLIIEFRRRGYKVAVIAIDPSSPLTGGALLGDRLR 105


>gi|294787471|ref|ZP_06752724.1| putative ABC transporter, ATP-binding protein [Parascardovia
            denticolens F0305]
 gi|294484827|gb|EFG32462.1| putative ABC transporter, ATP-binding protein [Parascardovia
            denticolens F0305]
          Length = 1320

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 7    ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAE 65
            ++ +G  G+GKTT I LL RF      ++ V   P         R V  LS         
Sbjct: 1133 VAIQGPNGSGKTTLIDLLMRFRPISGGELTVNGTPIDRVNTSRLRQVQTLSGQNVFIFDR 1192

Query: 66   AEAIVFAAARLDHVENVIRPA 86
                  A A+ D  +  IR A
Sbjct: 1193 TLRENIAIAKPDASDEEIREA 1213


>gi|293381031|ref|ZP_06627056.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           214-1]
 gi|290922405|gb|EFD99382.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
           214-1]
          Length = 516

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 7   ISFEGIEGAGKTTHISLL----KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I+ EG  G+GK+T I  L    +  + + NY++  + +    P         L     ++
Sbjct: 358 IAIEGKNGSGKSTLIKHLLGISQNLIAKGNYELIESLKISYLPQEFVMYSGSLKDFAKKY 417

Query: 63  GAEAEAIV-----FAAARLDHVENVIRPALMEGKIL 93
               EA++        AR D    + + ++ + K +
Sbjct: 418 HLSYEALLSNLKKMGFARADFTTRIEKMSMGQQKRV 453


>gi|269793989|ref|YP_003313444.1| cobalamin/Fe3+-siderophore ABC transporter ATPase [Sanguibacter
           keddieii DSM 10542]
 gi|269096174|gb|ACZ20610.1| ABC-type cobalamin/Fe3+-siderophore transport system, ATPase
           component [Sanguibacter keddieii DSM 10542]
          Length = 283

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%)

Query: 3   SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54
           +G F    G  G GK+T +  L R L  +   V +  EP  +   +    +L
Sbjct: 52  AGSFTVIVGPNGCGKSTLLRALGRTLTPRAGHVDLYGEPLASLGNKQIARML 103


>gi|257469106|ref|ZP_05633200.1| ABC transporter, ATP-binding protein [Fusobacterium ulcerans ATCC
          49185]
 gi|317063352|ref|ZP_07927837.1| 2-aminoethylphosphonate transport ATP-binding protein phnT
          [Fusobacterium ulcerans ATCC 49185]
 gi|313689028|gb|EFS25863.1| 2-aminoethylphosphonate transport ATP-binding protein phnT
          [Fusobacterium ulcerans ATCC 49185]
          Length = 321

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 3  SGLFISFEGIEGAGKTTHISLLK--RFLQRKNYDV----HVTREPGGTPAA 47
           G FI F G  G GKTT + ++     L   N  +      T EP     +
Sbjct: 28 KGEFICFLGPSGCGKTTLLRIIAGLEKLDSGNILINEKEITTLEPSQRNLS 78


>gi|256847680|ref|ZP_05553125.1| guanylate kinase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715369|gb|EEU30345.1| guanylate kinase [Lactobacillus coleohominis 101-4-CHN]
          Length = 184

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 1  MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41
          M         G  G+GKTT    LK+         H TR P
Sbjct: 1  MEKKKVFVITGATGSGKTTVARYLKKKYDMFKVITHTTRTP 41


>gi|256843007|ref|ZP_05548495.1| ABC transporter ATPase [Lactobacillus crispatus 125-2-CHN]
 gi|256848622|ref|ZP_05554056.1| ABC transporter ATPase component [Lactobacillus crispatus MV-1A-US]
 gi|262045973|ref|ZP_06018937.1| ABC transporter ATPase component [Lactobacillus crispatus MV-3A-US]
 gi|256614427|gb|EEU19628.1| ABC transporter ATPase [Lactobacillus crispatus 125-2-CHN]
 gi|256714161|gb|EEU29148.1| ABC transporter ATPase component [Lactobacillus crispatus MV-1A-US]
 gi|260573932|gb|EEX30488.1| ABC transporter ATPase component [Lactobacillus crispatus MV-3A-US]
          Length = 503

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 7   ISFEGIEGAGKTTHISLL----KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62
           I+ EG  G+GK+T I  L    +  + + NY++  + +    P         L     ++
Sbjct: 345 IAIEGKNGSGKSTLIKHLLGISQNLIAKGNYELIESLKISYLPQEFVMYSGSLKDFAKKY 404

Query: 63  GAEAEAIV-----FAAARLDHVENVIRPALMEGKIL 93
               EA++        AR D    + + ++ + K +
Sbjct: 405 HLSYEALLSNLKKMGFARADFTTRIEKMSMGQQKRV 440


>gi|240102879|ref|YP_002959188.1| Carbon monoxide dehydrogenase accessory protein, putative (cooC)
           [Thermococcus gammatolerans EJ3]
 gi|239910433|gb|ACS33324.1| Carbon monoxide dehydrogenase accessory protein, putative (cooC)
           [Thermococcus gammatolerans EJ3]
          Length = 341

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 19/47 (40%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50
           G  +   G  G GKTT  +LL R L R  Y V    E      A A 
Sbjct: 75  GFRVVITGKGGVGKTTMTALLARLLARDGYRVLAVDEDPQMNLAHAL 121


>gi|227877206|ref|ZP_03995280.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Lactobacillus crispatus JV-V01]
 gi|256842760|ref|ZP_05548248.1| ABC transporter ATPase [Lactobacillus crispatus 125-2-CHN]
 gi|256848930|ref|ZP_05554364.1| ABC transporter ATPase component [Lactobacillus crispatus
          MV-1A-US]
 gi|262045727|ref|ZP_06018691.1| ABC transporter ATPase component [Lactobacillus crispatus
          MV-3A-US]
 gi|293380205|ref|ZP_06626287.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
          214-1]
 gi|312977720|ref|ZP_07789467.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
          CTV-05]
 gi|227863260|gb|EEJ70705.1| ABC superfamily ATP binding cassette transporter, ABC protein
          [Lactobacillus crispatus JV-V01]
 gi|256614180|gb|EEU19381.1| ABC transporter ATPase [Lactobacillus crispatus 125-2-CHN]
 gi|256714469|gb|EEU29456.1| ABC transporter ATPase component [Lactobacillus crispatus
          MV-1A-US]
 gi|260573686|gb|EEX30242.1| ABC transporter ATPase component [Lactobacillus crispatus
          MV-3A-US]
 gi|290923249|gb|EFE00170.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
          214-1]
 gi|310895459|gb|EFQ44526.1| ABC transporter, ATP-binding protein [Lactobacillus crispatus
          CTV-05]
          Length = 212

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 2  NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
          N G F++  G  GAGK+T + L+   +   + D+  
Sbjct: 27 NKGDFLTLIGPSGAGKSTILRLIANLISANSGDILY 62


>gi|284031536|ref|YP_003381467.1| ABC transporter transmembrane protein [Kribbella flavida DSM 17836]
 gi|283810829|gb|ADB32668.1| ABC transporter transmembrane region [Kribbella flavida DSM 17836]
          Length = 685

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 15/107 (14%)

Query: 4   GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--------VTREPGGTPAAEAARHVLL 55
           G+ ++  G  GAGKTT ++L+ RF +     +         +TR    +      +   L
Sbjct: 454 GMTVAIVGPTGAGKTTLVNLIMRFYELNGGRITLDGVDITELTRHDLRSRIGMVLQDTWL 513

Query: 56  SCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96
             G              E  + AAA+  +V+  +  +L +G   + D
Sbjct: 514 FGGTIRDNILYGNLDATEQDMLAAAKATYVDRFV-HSLPDGYDTVID 559


>gi|222106920|ref|YP_002547711.1| pantothenate kinase [Agrobacterium vitis S4]
 gi|221738099|gb|ACM38995.1| pantothenate kinase [Agrobacterium vitis S4]
          Length = 211

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query: 5  LFISFEGIEGAGKTTHISLLKRFLQRKN 32
            I+  G  GAGK+T    L+  L  + 
Sbjct: 22 FMIAIAGPPGAGKSTLSEALREALIARG 49


>gi|199597307|ref|ZP_03210738.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Lactobacillus rhamnosus HN001]
 gi|199591823|gb|EDY99898.1| ABC-type spermidine/putrescine transport system, ATPase component
          [Lactobacillus rhamnosus HN001]
          Length = 362

 Score = 35.4 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 3  SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37
           G F +  G  G+GKTT +  +  FL     +V  
Sbjct: 30 QGKFYTLLGPSGSGKTTILRAIAGFLDVSEGEVLF 64


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.313    0.180    0.579 

Lambda     K      H
   0.267   0.0553    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,165,966,545
Number of Sequences: 13984884
Number of extensions: 266820627
Number of successful extensions: 1221573
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 8892
Number of HSP's successfully gapped in prelim test: 7344
Number of HSP's that attempted gapping in prelim test: 1196176
Number of HSP's gapped (non-prelim): 18814
length of query: 225
length of database: 4,792,584,752
effective HSP length: 134
effective length of query: 91
effective length of database: 2,918,610,296
effective search space: 265593536936
effective search space used: 265593536936
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 80 (35.0 bits)